Query 022019
Match_columns 304
No_of_seqs 503 out of 1699
Neff 11.8
Searched_HMMs 29240
Date Mon Mar 25 12:46:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022019.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022019hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gqb_B Methylosome protein 50; 100.0 1.2E-38 4.1E-43 257.5 31.0 241 28-301 50-293 (344)
2 1got_B GT-beta; complex (GTP-b 100.0 2.1E-38 7.3E-43 256.4 28.8 212 51-301 46-261 (340)
3 4gqb_B Methylosome protein 50; 100.0 3.3E-38 1.1E-42 254.9 29.3 226 35-299 104-333 (344)
4 3ow8_A WD repeat-containing pr 100.0 4.3E-38 1.5E-42 252.3 29.5 204 53-295 115-319 (321)
5 1vyh_C Platelet-activating fac 100.0 3.8E-38 1.3E-42 261.1 29.6 210 54-301 144-373 (410)
6 2ynn_A Coatomer subunit beta'; 100.0 2.2E-37 7.6E-42 246.6 32.3 224 35-301 36-263 (304)
7 2ynn_A Coatomer subunit beta'; 100.0 6.8E-38 2.3E-42 249.5 29.0 212 53-301 6-221 (304)
8 3ow8_A WD repeat-containing pr 100.0 3.9E-38 1.3E-42 252.6 27.7 209 54-301 74-283 (321)
9 1vyh_C Platelet-activating fac 100.0 1.2E-37 4E-42 258.2 29.7 209 54-301 102-331 (410)
10 2pbi_B Guanine nucleotide-bind 100.0 4.1E-37 1.4E-41 250.0 32.0 229 51-301 55-319 (354)
11 3frx_A Guanine nucleotide-bind 100.0 5.7E-37 2E-41 245.8 30.3 216 52-301 9-231 (319)
12 3iz6_a 40S ribosomal protein R 100.0 5.4E-37 1.8E-41 251.8 29.0 236 52-301 58-379 (380)
13 3fm0_A Protein CIAO1; WDR39,SG 100.0 6.1E-37 2.1E-41 248.3 27.9 212 52-296 7-224 (345)
14 4g56_B MGC81050 protein; prote 100.0 3E-37 1E-41 251.0 25.8 224 36-298 117-344 (357)
15 1nr0_A Actin interacting prote 100.0 3.7E-36 1.2E-40 261.3 34.1 245 35-300 40-358 (611)
16 1got_B GT-beta; complex (GTP-b 100.0 5.7E-36 1.9E-40 242.2 32.1 222 53-294 90-340 (340)
17 2pbi_B Guanine nucleotide-bind 100.0 5.5E-36 1.9E-40 243.4 31.8 207 53-294 147-354 (354)
18 4ery_A WD repeat-containing pr 100.0 1E-35 3.6E-40 237.9 31.9 212 51-301 14-227 (312)
19 2xzm_R RACK1; ribosome, transl 100.0 8.8E-36 3E-40 241.4 31.8 217 51-297 12-244 (343)
20 2pm7_B Protein transport prote 100.0 8E-36 2.7E-40 236.8 29.3 212 55-298 4-239 (297)
21 4g56_B MGC81050 protein; prote 100.0 3.8E-36 1.3E-40 244.6 27.7 235 32-301 66-305 (357)
22 2hes_X YDR267CP; beta-propelle 100.0 1.7E-35 5.7E-40 238.4 31.1 212 52-298 6-231 (330)
23 3frx_A Guanine nucleotide-bind 100.0 8.8E-36 3E-40 238.9 29.2 232 21-298 32-318 (319)
24 3f3f_A Nucleoporin SEH1; struc 100.0 5.1E-35 1.7E-39 236.8 30.5 223 55-301 6-341 (351)
25 1erj_A Transcriptional repress 100.0 4.4E-35 1.5E-39 241.5 30.4 232 35-299 146-391 (393)
26 1erj_A Transcriptional repress 100.0 1.2E-34 4.2E-39 238.9 31.1 208 61-301 124-345 (393)
27 4e54_B DNA damage-binding prot 100.0 5.3E-36 1.8E-40 250.3 22.8 217 51-301 110-331 (435)
28 3dm0_A Maltose-binding peripla 100.0 9.7E-35 3.3E-39 256.1 31.3 220 53-302 375-597 (694)
29 2pm7_B Protein transport prote 100.0 3E-34 1E-38 227.8 30.2 214 53-296 46-284 (297)
30 2hes_X YDR267CP; beta-propelle 100.0 2.3E-34 7.8E-39 231.8 29.5 219 52-298 99-329 (330)
31 3bg1_A Protein SEC13 homolog; 100.0 2E-35 6.8E-40 236.5 22.0 212 55-297 8-247 (316)
32 4h5i_A Guanine nucleotide-exch 100.0 1.8E-34 6.3E-39 235.3 27.8 206 57-297 130-343 (365)
33 4aow_A Guanine nucleotide-bind 100.0 1E-33 3.5E-38 228.8 31.8 216 54-301 32-250 (340)
34 3fm0_A Protein CIAO1; WDR39,SG 100.0 4.6E-34 1.6E-38 231.4 29.3 222 53-302 98-340 (345)
35 4ery_A WD repeat-containing pr 100.0 2.6E-33 9E-38 223.9 32.3 222 36-301 47-272 (312)
36 3zwl_B Eukaryotic translation 100.0 2.8E-33 9.7E-38 228.5 31.0 228 42-301 14-253 (369)
37 4aow_A Guanine nucleotide-bind 100.0 1.1E-33 3.8E-38 228.6 27.8 252 21-300 53-340 (340)
38 2xzm_R RACK1; ribosome, transl 100.0 2.3E-33 8E-38 227.2 27.9 226 36-299 100-342 (343)
39 1nr0_A Actin interacting prote 100.0 6.1E-33 2.1E-37 241.1 31.1 225 53-297 183-522 (611)
40 3jrp_A Fusion protein of prote 100.0 3E-33 1E-37 229.2 27.6 214 53-298 4-241 (379)
41 4gga_A P55CDC, cell division c 100.0 1.1E-32 3.8E-37 229.2 29.7 237 36-299 127-397 (420)
42 3ei3_B DNA damage-binding prot 100.0 8E-33 2.7E-37 227.4 28.2 214 51-300 64-285 (383)
43 2ymu_A WD-40 repeat protein; u 100.0 6.3E-33 2.2E-37 239.7 28.6 199 53-294 378-577 (577)
44 4ggc_A P55CDC, cell division c 100.0 1.2E-32 4E-37 220.5 28.2 242 35-299 46-317 (318)
45 2oaj_A Protein SNI1; WD40 repe 100.0 4.1E-33 1.4E-37 250.8 27.5 210 56-301 13-246 (902)
46 3bg1_A Protein SEC13 homolog; 100.0 2.6E-33 8.9E-38 224.2 23.0 216 53-296 50-292 (316)
47 3zwl_B Eukaryotic translation 100.0 4.5E-32 1.5E-36 221.3 30.8 236 35-299 55-348 (369)
48 2aq5_A Coronin-1A; WD40 repeat 100.0 1.8E-32 6.2E-37 226.7 28.6 234 35-300 58-302 (402)
49 3dwl_C Actin-related protein 2 100.0 2.4E-34 8.4E-39 235.9 16.8 208 56-300 7-239 (377)
50 2j04_B YDR362CP, TAU91; beta p 100.0 1.3E-33 4.6E-38 239.0 21.5 214 55-297 202-428 (524)
51 2pm9_A Protein WEB1, protein t 100.0 7E-33 2.4E-37 230.0 25.4 241 35-300 90-340 (416)
52 3dm0_A Maltose-binding peripla 100.0 1.2E-32 4.1E-37 242.8 28.2 228 35-301 406-636 (694)
53 3i2n_A WD repeat-containing pr 100.0 1.9E-32 6.3E-37 222.8 27.3 236 35-301 91-357 (357)
54 2xyi_A Probable histone-bindin 100.0 2.3E-32 8E-37 227.9 28.5 219 51-298 172-411 (430)
55 1k8k_C P40, ARP2/3 complex 41 100.0 3.5E-32 1.2E-36 222.5 28.9 216 55-301 3-237 (372)
56 3dwl_C Actin-related protein 2 100.0 1.6E-33 5.4E-38 231.0 20.8 215 53-296 48-280 (377)
57 1sq9_A Antiviral protein SKI8; 100.0 6.1E-33 2.1E-37 229.0 23.9 244 35-301 37-326 (397)
58 1gxr_A ESG1, transducin-like e 100.0 2.6E-31 8.9E-36 214.3 32.1 227 35-301 73-300 (337)
59 3jrp_A Fusion protein of prote 100.0 3E-32 1E-36 223.2 26.8 214 53-298 48-288 (379)
60 3vl1_A 26S proteasome regulato 100.0 4.8E-32 1.6E-36 225.3 28.1 225 35-298 120-366 (420)
61 1sq9_A Antiviral protein SKI8; 100.0 2.3E-32 7.8E-37 225.6 25.7 215 54-299 110-397 (397)
62 4a11_B DNA excision repair pro 100.0 1.8E-31 6.3E-36 220.7 30.9 216 57-301 96-369 (408)
63 3gre_A Serine/threonine-protei 100.0 1.5E-32 5.1E-37 229.6 24.2 222 53-301 55-296 (437)
64 3dw8_B Serine/threonine-protei 100.0 2.1E-32 7.1E-37 229.3 24.8 228 58-300 26-319 (447)
65 4aez_A CDC20, WD repeat-contai 100.0 1.3E-31 4.6E-36 221.4 29.2 220 35-300 114-339 (401)
66 1gxr_A ESG1, transducin-like e 100.0 3.6E-31 1.2E-35 213.4 30.8 210 56-301 47-259 (337)
67 3vl1_A 26S proteasome regulato 100.0 3.8E-32 1.3E-36 225.9 25.4 223 35-300 79-325 (420)
68 3k26_A Polycomb protein EED; W 100.0 9.3E-33 3.2E-37 225.2 21.2 232 35-297 96-366 (366)
69 2ymu_A WD-40 repeat protein; u 100.0 2.2E-31 7.5E-36 230.1 30.2 203 54-300 338-541 (577)
70 4a11_B DNA excision repair pro 100.0 3.8E-31 1.3E-35 218.8 29.6 221 55-301 38-280 (408)
71 1r5m_A SIR4-interacting protei 100.0 1.3E-31 4.4E-36 222.7 26.4 221 53-296 142-424 (425)
72 1k8k_C P40, ARP2/3 complex 41 100.0 8.8E-32 3E-36 220.1 24.8 233 35-297 31-274 (372)
73 1r5m_A SIR4-interacting protei 100.0 5.4E-31 1.9E-35 218.9 29.9 205 59-299 107-363 (425)
74 3jro_A Fusion protein of prote 100.0 8.6E-32 3E-36 238.8 26.3 213 55-299 4-240 (753)
75 2j04_B YDR362CP, TAU91; beta p 100.0 8.6E-33 2.9E-37 234.1 18.2 211 53-298 259-518 (524)
76 4e54_B DNA damage-binding prot 100.0 2.9E-32 9.8E-37 227.7 21.0 224 35-300 143-433 (435)
77 4aez_A CDC20, WD repeat-contai 100.0 5.6E-31 1.9E-35 217.7 28.2 219 36-301 158-384 (401)
78 3mmy_A MRNA export factor; mRN 100.0 7.3E-31 2.5E-35 214.1 28.3 222 51-302 30-309 (368)
79 3i2n_A WD repeat-containing pr 100.0 1.4E-31 4.8E-36 217.6 23.7 232 35-299 45-293 (357)
80 3mkq_A Coatomer beta'-subunit; 100.0 3.4E-31 1.2E-35 237.6 27.3 212 53-301 6-221 (814)
81 3v7d_B Cell division control p 100.0 2E-30 6.9E-35 218.4 30.3 224 35-301 143-385 (464)
82 3vu4_A KMHSV2; beta-propeller 100.0 4.9E-31 1.7E-35 214.4 25.1 209 55-298 14-272 (355)
83 3k26_A Polycomb protein EED; W 100.0 1.6E-31 5.4E-36 218.0 22.2 234 35-300 45-321 (366)
84 3dw8_B Serine/threonine-protei 100.0 7.6E-32 2.6E-36 225.9 20.7 236 51-301 72-377 (447)
85 3mkq_A Coatomer beta'-subunit; 100.0 1.6E-30 5.4E-35 233.3 30.0 224 35-301 36-263 (814)
86 2pm9_A Protein WEB1, protein t 100.0 1.7E-31 5.8E-36 221.6 21.5 236 35-301 46-298 (416)
87 3gre_A Serine/threonine-protei 100.0 2.4E-31 8.3E-36 222.3 22.4 219 58-301 109-363 (437)
88 3odt_A Protein DOA1; ubiquitin 100.0 5E-30 1.7E-34 204.7 28.6 217 36-301 41-259 (313)
89 4gq1_A NUP37; propeller, trans 100.0 6.4E-32 2.2E-36 222.6 18.0 218 53-297 129-389 (393)
90 3ei3_B DNA damage-binding prot 100.0 1.2E-30 4E-35 214.5 24.9 225 35-301 97-343 (383)
91 4h5i_A Guanine nucleotide-exch 100.0 2.1E-30 7E-35 211.4 26.0 158 131-302 138-305 (365)
92 2w18_A PALB2, fancn, partner a 100.0 1.2E-30 4.2E-35 204.3 22.7 218 62-295 113-355 (356)
93 2xyi_A Probable histone-bindin 100.0 2.6E-30 8.8E-35 215.6 25.5 218 55-297 123-353 (430)
94 3v7d_B Cell division control p 100.0 6.9E-30 2.4E-34 215.1 27.8 212 54-301 115-345 (464)
95 3jro_A Fusion protein of prote 100.0 5.7E-31 2E-35 233.6 22.2 214 53-298 46-286 (753)
96 2j04_A TAU60, YPL007P, hypothe 100.0 2.3E-30 7.9E-35 215.3 23.6 224 58-300 13-257 (588)
97 3mmy_A MRNA export factor; mRN 100.0 1.3E-30 4.4E-35 212.7 21.8 222 54-301 80-353 (368)
98 1yfq_A Cell cycle arrest prote 100.0 1.6E-30 5.4E-35 210.3 21.9 206 55-301 51-286 (342)
99 1pgu_A Actin interacting prote 100.0 1.5E-29 5.2E-34 220.0 28.6 232 35-301 40-287 (615)
100 3sfz_A APAF-1, apoptotic pepti 100.0 1.1E-29 3.7E-34 237.3 29.2 208 55-301 610-875 (1249)
101 3sfz_A APAF-1, apoptotic pepti 100.0 2.5E-29 8.5E-34 234.9 30.5 227 36-298 639-914 (1249)
102 3lrv_A PRE-mRNA-splicing facto 100.0 5.1E-30 1.8E-34 207.5 22.3 209 60-299 76-294 (343)
103 2aq5_A Coronin-1A; WD40 repeat 100.0 4.7E-30 1.6E-34 212.2 22.2 229 35-300 105-345 (402)
104 2vdu_B TRNA (guanine-N(7)-)-me 100.0 3.1E-29 1.1E-33 210.3 27.4 204 56-295 98-337 (450)
105 3odt_A Protein DOA1; ubiquitin 100.0 7E-29 2.4E-33 198.0 27.6 205 51-301 9-218 (313)
106 1pgu_A Actin interacting prote 100.0 1.8E-29 6.1E-34 219.6 25.3 208 57-301 15-242 (615)
107 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.6E-29 8.9E-34 210.8 24.5 223 61-301 5-275 (450)
108 1p22_A F-BOX/WD-repeat protein 100.0 4.8E-29 1.6E-33 208.3 25.7 209 36-299 155-367 (435)
109 1yfq_A Cell cycle arrest prote 100.0 5E-29 1.7E-33 201.5 24.4 214 54-298 5-226 (342)
110 2j04_A TAU60, YPL007P, hypothe 100.0 3.6E-29 1.2E-33 208.2 23.3 200 58-296 83-296 (588)
111 1p22_A F-BOX/WD-repeat protein 100.0 1.3E-28 4.3E-33 205.7 24.4 213 36-300 195-417 (435)
112 2ovr_B FBW7, F-BOX/WD repeat p 100.0 6.8E-28 2.3E-32 201.9 27.2 212 35-301 140-352 (445)
113 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3.8E-27 1.3E-31 197.4 30.2 211 36-301 181-395 (445)
114 2oaj_A Protein SNI1; WD40 repe 100.0 2.4E-28 8.1E-33 220.0 22.5 222 55-301 430-736 (902)
115 3lrv_A PRE-mRNA-splicing facto 100.0 5.6E-28 1.9E-32 195.6 22.5 202 57-297 122-333 (343)
116 4gq1_A NUP37; propeller, trans 100.0 5.2E-29 1.8E-33 205.2 16.5 225 59-301 88-352 (393)
117 4gga_A P55CDC, cell division c 100.0 1.1E-26 3.7E-31 193.2 29.9 211 62-301 107-357 (420)
118 4ggc_A P55CDC, cell division c 100.0 2.7E-26 9.3E-31 183.5 28.0 210 63-301 28-277 (318)
119 1l0q_A Surface layer protein; 100.0 8.4E-26 2.9E-30 186.0 30.6 219 35-301 13-237 (391)
120 3iz6_a 40S ribosomal protein R 100.0 9.3E-27 3.2E-31 191.0 24.1 193 35-256 181-377 (380)
121 1l0q_A Surface layer protein; 100.0 1.9E-25 6.6E-30 183.8 30.8 217 35-301 55-279 (391)
122 3bws_A Protein LP49; two-domai 100.0 1.2E-25 4.3E-30 187.4 27.4 225 36-301 146-394 (433)
123 3vu4_A KMHSV2; beta-propeller 99.9 1.6E-25 5.4E-30 181.9 24.5 203 62-298 60-337 (355)
124 3bws_A Protein LP49; two-domai 99.9 1.8E-24 6E-29 180.5 30.3 215 35-297 192-432 (433)
125 3f3f_A Nucleoporin SEH1; struc 99.9 8E-25 2.7E-29 176.8 23.6 173 114-300 6-252 (351)
126 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.1E-23 3.8E-28 174.4 28.4 214 35-299 160-389 (415)
127 2oit_A Nucleoporin 214KDA; NH2 99.9 1.8E-24 6E-29 179.9 18.6 217 60-298 36-279 (434)
128 2ojh_A Uncharacterized protein 99.9 5.2E-23 1.8E-27 162.5 23.3 219 35-300 23-261 (297)
129 2w18_A PALB2, fancn, partner a 99.9 8.5E-23 2.9E-27 160.1 24.0 208 62-301 41-318 (356)
130 1nir_A Nitrite reductase; hemo 99.9 5.6E-22 1.9E-26 169.2 27.3 209 63-301 181-462 (543)
131 2hqs_A Protein TOLB; TOLB, PAL 99.9 2E-22 6.7E-27 167.0 22.5 220 35-300 94-347 (415)
132 3u4y_A Uncharacterized protein 99.9 1.4E-21 4.8E-26 157.1 26.6 225 35-300 21-255 (331)
133 3hfq_A Uncharacterized protein 99.9 8.6E-21 2.9E-25 153.6 30.4 232 55-300 80-322 (347)
134 1ri6_A Putative isomerase YBHE 99.9 4.5E-21 1.5E-25 154.7 27.5 210 62-296 85-307 (343)
135 1pby_B Quinohemoprotein amine 99.9 6.4E-21 2.2E-25 153.4 27.5 229 35-301 12-314 (337)
136 1nir_A Nitrite reductase; hemo 99.9 4E-21 1.4E-25 163.9 24.7 202 67-301 144-359 (543)
137 2oit_A Nucleoporin 214KDA; NH2 99.9 8.8E-22 3E-26 163.7 19.6 217 58-295 90-331 (434)
138 3vgz_A Uncharacterized protein 99.9 2.1E-20 7.2E-25 151.5 26.9 215 61-301 89-307 (353)
139 3vgz_A Uncharacterized protein 99.9 2.6E-20 9.1E-25 150.9 25.2 209 59-301 39-266 (353)
140 1ri6_A Putative isomerase YBHE 99.9 3.4E-20 1.1E-24 149.6 25.7 206 58-296 35-261 (343)
141 3u4y_A Uncharacterized protein 99.9 3.2E-20 1.1E-24 149.2 25.1 227 35-299 63-306 (331)
142 2ecf_A Dipeptidyl peptidase IV 99.9 6.1E-21 2.1E-25 169.6 21.3 218 60-301 36-325 (741)
143 3hfq_A Uncharacterized protein 99.9 2.8E-19 9.6E-24 144.7 24.9 212 58-296 37-270 (347)
144 1xfd_A DIP, dipeptidyl aminope 99.9 5.1E-21 1.7E-25 169.6 15.9 209 62-300 18-292 (723)
145 2ojh_A Uncharacterized protein 99.9 1.2E-19 4.1E-24 143.1 21.3 204 35-284 63-290 (297)
146 1jmx_B Amine dehydrogenase; ox 99.9 4.7E-19 1.6E-23 143.3 24.2 232 35-301 22-329 (349)
147 2ecf_A Dipeptidyl peptidase IV 99.8 6.5E-20 2.2E-24 163.0 20.1 199 62-296 110-366 (741)
148 1xfd_A DIP, dipeptidyl aminope 99.8 1.9E-19 6.4E-24 159.6 21.4 228 35-294 38-341 (723)
149 2z3z_A Dipeptidyl aminopeptida 99.8 7.1E-19 2.4E-23 155.5 24.8 206 63-299 183-437 (706)
150 2z3z_A Dipeptidyl aminopeptida 99.8 5.2E-19 1.8E-23 156.3 23.5 240 35-299 102-393 (706)
151 1z68_A Fibroblast activation p 99.8 4.7E-20 1.6E-24 163.3 14.5 203 65-300 20-294 (719)
152 3scy_A Hypothetical bacterial 99.8 1.3E-17 4.3E-22 135.7 27.1 214 59-296 48-290 (361)
153 3o4h_A Acylamino-acid-releasin 99.8 3.4E-19 1.1E-23 154.1 18.5 196 60-301 21-231 (582)
154 3scy_A Hypothetical bacterial 99.8 3.9E-17 1.3E-21 132.8 29.7 224 56-300 95-342 (361)
155 1k32_A Tricorn protease; prote 99.8 6.1E-19 2.1E-23 162.1 20.6 195 59-297 294-502 (1045)
156 1jof_A Carboxy-CIS,CIS-muconat 99.8 1.9E-17 6.4E-22 134.9 26.7 211 59-299 38-294 (365)
157 1k32_A Tricorn protease; prote 99.8 1.4E-18 4.7E-23 159.8 20.0 211 55-299 240-463 (1045)
158 4a5s_A Dipeptidyl peptidase 4 99.8 1.9E-18 6.6E-23 153.3 18.7 207 62-299 18-296 (740)
159 1jof_A Carboxy-CIS,CIS-muconat 99.8 1.4E-17 4.6E-22 135.8 22.2 213 62-298 84-342 (365)
160 1pby_B Quinohemoprotein amine 99.8 1.4E-17 4.8E-22 133.8 21.6 192 73-301 2-273 (337)
161 1z68_A Fibroblast activation p 99.8 5.4E-19 1.8E-23 156.6 14.2 231 35-299 37-348 (719)
162 1jmx_B Amine dehydrogenase; ox 99.8 9E-18 3.1E-22 135.7 20.0 201 65-301 4-288 (349)
163 2oiz_A Aromatic amine dehydrog 99.8 3.6E-16 1.2E-20 126.9 27.4 229 36-301 33-340 (361)
164 3o4h_A Acylamino-acid-releasin 99.8 7.9E-18 2.7E-22 145.6 17.6 194 55-295 58-274 (582)
165 1q7f_A NHL, brain tumor CG1071 99.8 1.4E-15 4.8E-20 119.5 28.5 228 57-300 26-283 (286)
166 3pe7_A Oligogalacturonate lyas 99.7 1.7E-16 5.7E-21 130.3 19.9 206 55-300 25-276 (388)
167 3pe7_A Oligogalacturonate lyas 99.7 1.3E-15 4.5E-20 124.9 22.3 209 56-300 76-332 (388)
168 4a5s_A Dipeptidyl peptidase 4 99.7 1.9E-16 6.5E-21 140.6 18.5 229 35-299 37-355 (740)
169 3fvz_A Peptidyl-glycine alpha- 99.7 1.8E-14 6.2E-19 115.5 27.6 216 58-298 88-323 (329)
170 3fvz_A Peptidyl-glycine alpha- 99.7 4.8E-15 1.7E-19 118.9 23.2 216 60-301 23-281 (329)
171 3azo_A Aminopeptidase; POP fam 99.7 3.6E-15 1.2E-19 130.9 22.0 200 59-300 128-372 (662)
172 3azo_A Aminopeptidase; POP fam 99.7 1.4E-15 4.9E-20 133.4 19.0 212 55-299 62-327 (662)
173 2dg1_A DRP35, lactonase; beta 99.7 2.3E-13 7.8E-18 109.2 29.7 205 54-296 38-262 (333)
174 3e5z_A Putative gluconolactona 99.7 1.4E-13 4.7E-18 108.7 26.3 206 55-298 63-287 (296)
175 2xdw_A Prolyl endopeptidase; a 99.7 1.7E-14 5.9E-19 127.5 23.3 205 58-299 122-370 (710)
176 3e5z_A Putative gluconolactona 99.7 6.5E-14 2.2E-18 110.6 24.3 202 54-296 21-245 (296)
177 2dg1_A DRP35, lactonase; beta 99.7 6.2E-13 2.1E-17 106.7 29.6 196 58-284 84-298 (333)
178 1rwi_B Serine/threonine-protei 99.7 7.7E-14 2.6E-18 108.6 22.8 202 59-300 65-267 (270)
179 1qks_A Cytochrome CD1 nitrite 99.6 4E-13 1.4E-17 114.7 27.9 199 70-301 165-377 (567)
180 3c5m_A Oligogalacturonate lyas 99.6 1.5E-15 5.1E-20 124.8 12.2 202 62-300 37-276 (396)
181 3no2_A Uncharacterized protein 99.6 2.2E-13 7.4E-18 106.2 23.3 194 71-301 4-199 (276)
182 2gop_A Trilobed protease; beta 99.6 9.8E-14 3.3E-18 112.0 22.1 186 61-299 59-293 (347)
183 3c5m_A Oligogalacturonate lyas 99.6 2.7E-14 9.1E-19 117.3 18.0 215 63-299 83-331 (396)
184 3dsm_A Uncharacterized protein 99.6 1.8E-13 6.2E-18 109.6 21.7 205 60-301 83-305 (328)
185 2xdw_A Prolyl endopeptidase; a 99.6 3.3E-13 1.1E-17 119.4 24.6 203 63-299 173-416 (710)
186 1xip_A Nucleoporin NUP159; bet 99.6 1E-13 3.5E-18 112.0 19.3 183 62-284 39-232 (388)
187 1rwi_B Serine/threonine-protei 99.6 6.2E-13 2.1E-17 103.4 22.1 198 62-299 25-224 (270)
188 2mad_H Methylamine dehydrogena 99.6 4.9E-12 1.7E-16 102.8 28.1 216 65-301 70-354 (373)
189 2bkl_A Prolyl endopeptidase; m 99.6 3.6E-13 1.2E-17 118.8 23.1 199 58-296 118-348 (695)
190 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 5.4E-12 1.8E-16 100.3 27.4 160 129-298 119-300 (314)
191 2oiz_A Aromatic amine dehydrog 99.6 8.8E-13 3E-17 107.0 22.3 206 61-278 108-360 (361)
192 3sjl_D Methylamine dehydrogena 99.6 2.4E-12 8.1E-17 103.7 24.0 217 65-301 82-367 (386)
193 1qks_A Cytochrome CD1 nitrite 99.6 1.2E-11 4E-16 105.7 29.0 203 62-297 198-421 (567)
194 3no2_A Uncharacterized protein 99.6 4.1E-12 1.4E-16 98.9 23.5 206 35-284 16-231 (276)
195 3c75_H MADH, methylamine dehyd 99.5 4.3E-12 1.5E-16 103.9 23.5 217 65-301 122-406 (426)
196 3dsm_A Uncharacterized protein 99.5 5.4E-12 1.9E-16 101.0 23.1 200 61-300 44-256 (328)
197 3g4e_A Regucalcin; six bladed 99.5 6.6E-11 2.3E-15 93.3 28.8 207 57-301 9-233 (297)
198 2z2n_A Virginiamycin B lyase; 99.5 6.3E-11 2.2E-15 93.3 28.6 201 57-299 11-214 (299)
199 3g4e_A Regucalcin; six bladed 99.5 4E-11 1.4E-15 94.6 27.0 196 59-284 52-260 (297)
200 3hrp_A Uncharacterized protein 99.5 1.2E-11 4E-16 102.0 24.5 207 60-300 130-357 (409)
201 2z2n_A Virginiamycin B lyase; 99.5 1.3E-10 4.4E-15 91.5 29.4 197 59-296 55-254 (299)
202 2bkl_A Prolyl endopeptidase; m 99.5 2.5E-12 8.5E-17 113.5 21.0 202 64-300 171-400 (695)
203 1yr2_A Prolyl oligopeptidase; 99.5 5.6E-12 1.9E-16 112.0 22.6 198 59-296 161-392 (741)
204 2gop_A Trilobed protease; beta 99.5 9.6E-12 3.3E-16 100.3 20.6 180 63-296 106-330 (347)
205 3iuj_A Prolyl endopeptidase; h 99.5 6.2E-12 2.1E-16 110.8 20.8 204 57-298 125-360 (693)
206 1xip_A Nucleoporin NUP159; bet 99.5 4.2E-13 1.4E-17 108.4 11.5 145 133-299 44-193 (388)
207 2ghs_A AGR_C_1268P; regucalcin 99.4 4.7E-10 1.6E-14 89.7 26.8 197 61-299 49-261 (326)
208 1mda_H Methylamine dehydrogena 99.4 2.3E-11 7.9E-16 98.0 18.9 213 65-301 69-350 (368)
209 2qc5_A Streptogramin B lactona 99.4 1.8E-09 6E-14 85.0 29.2 198 58-296 59-259 (300)
210 2qc5_A Streptogramin B lactona 99.4 1.1E-09 3.6E-14 86.2 27.9 197 58-295 17-216 (300)
211 1q7f_A NHL, brain tumor CG1071 99.4 8.6E-11 2.9E-15 92.1 20.2 154 132-297 35-194 (286)
212 2ghs_A AGR_C_1268P; regucalcin 99.4 1.4E-09 4.9E-14 86.9 27.5 192 60-284 89-290 (326)
213 1yr2_A Prolyl oligopeptidase; 99.4 1.7E-10 5.9E-15 102.5 23.6 202 63-301 211-445 (741)
214 3dr2_A Exported gluconolactona 99.4 3.5E-10 1.2E-14 89.6 22.8 200 55-294 80-303 (305)
215 3dr2_A Exported gluconolactona 99.3 1.2E-09 4.1E-14 86.4 22.9 200 55-296 39-266 (305)
216 2iwa_A Glutamine cyclotransfer 99.3 5.7E-09 2E-13 79.7 25.4 200 62-298 22-238 (266)
217 3hrp_A Uncharacterized protein 99.3 7.7E-09 2.6E-13 85.2 27.0 200 66-295 176-408 (409)
218 2qe8_A Uncharacterized protein 99.3 9.8E-10 3.4E-14 88.5 19.9 218 61-299 17-280 (343)
219 2ece_A 462AA long hypothetical 99.3 1.1E-08 3.8E-13 83.2 25.6 202 70-297 93-352 (462)
220 1fwx_A Nitrous oxide reductase 99.2 6.4E-10 2.2E-14 93.5 17.6 207 61-300 134-434 (595)
221 2hz6_A Endoplasmic reticulum t 99.2 2.5E-12 8.4E-17 104.6 2.8 184 71-301 8-196 (369)
222 2qe8_A Uncharacterized protein 99.2 2.8E-09 9.7E-14 85.8 19.9 208 57-284 63-309 (343)
223 3sjl_D Methylamine dehydrogena 99.2 1.2E-09 4.1E-14 88.0 17.2 193 67-299 39-258 (386)
224 3nol_A Glutamine cyclotransfer 99.2 2.4E-08 8.3E-13 75.4 22.0 184 62-284 44-243 (262)
225 2mad_H Methylamine dehydrogena 99.2 1.9E-08 6.5E-13 81.7 22.7 190 68-298 28-244 (373)
226 2ece_A 462AA long hypothetical 99.1 3.2E-08 1.1E-12 80.6 22.4 195 63-284 140-399 (462)
227 3iuj_A Prolyl endopeptidase; h 99.1 1.6E-08 5.5E-13 89.2 22.3 198 64-301 178-409 (693)
228 1pjx_A Dfpase, DIISOPROPYLFLUO 99.1 1.1E-08 3.7E-13 81.1 18.3 158 131-296 22-206 (314)
229 3c75_H MADH, methylamine dehyd 99.1 8.8E-09 3E-13 84.4 17.1 190 70-298 82-296 (426)
230 3qqz_A Putative uncharacterize 99.1 9.7E-07 3.3E-11 67.0 27.1 214 55-295 21-251 (255)
231 3mbr_X Glutamine cyclotransfer 99.1 2.3E-07 7.9E-12 69.5 23.2 185 61-284 21-222 (243)
232 1npe_A Nidogen, entactin; glyc 99.1 5E-07 1.7E-11 69.8 25.9 201 61-301 36-242 (267)
233 3nok_A Glutaminyl cyclase; bet 99.1 1.5E-07 5.3E-12 71.1 21.9 184 61-284 55-253 (268)
234 2hz6_A Endoplasmic reticulum t 99.0 1E-10 3.4E-15 95.1 2.3 144 137-301 8-153 (369)
235 1npe_A Nidogen, entactin; glyc 99.0 8.1E-07 2.8E-11 68.6 24.4 153 132-298 41-199 (267)
236 1fwx_A Nitrous oxide reductase 99.0 5.4E-08 1.9E-12 82.0 18.7 191 71-298 100-362 (595)
237 2iwa_A Glutamine cyclotransfer 98.9 6E-08 2.1E-12 74.1 15.9 151 132-301 26-185 (266)
238 1yiq_A Quinohemoprotein alcoho 98.9 2.9E-07 9.9E-12 80.9 22.3 166 133-301 241-509 (689)
239 1kb0_A Quinohemoprotein alcoho 98.9 4.7E-07 1.6E-11 79.4 21.3 167 133-302 249-512 (677)
240 2fp8_A Strictosidine synthase; 98.8 4.5E-06 1.5E-10 66.3 23.5 216 61-296 19-268 (322)
241 2xe4_A Oligopeptidase B; hydro 98.8 6.3E-07 2.2E-11 79.7 19.9 197 62-295 175-398 (751)
242 1kb0_A Quinohemoprotein alcoho 98.8 1.9E-07 6.6E-12 81.9 16.3 208 64-296 246-566 (677)
243 2fp8_A Strictosidine synthase; 98.8 8.3E-06 2.8E-10 64.8 23.9 200 62-299 81-315 (322)
244 3hxj_A Pyrrolo-quinoline quino 98.8 5.1E-07 1.8E-11 71.9 16.9 141 135-298 185-325 (330)
245 3nol_A Glutamine cyclotransfer 98.8 2.6E-07 9E-12 69.8 13.9 145 137-301 52-205 (262)
246 3v64_C Agrin; beta propeller, 98.8 3.1E-05 1.1E-09 62.3 26.9 200 61-299 73-277 (349)
247 2p4o_A Hypothetical protein; p 98.8 3.3E-05 1.1E-09 60.9 27.9 202 61-296 32-241 (306)
248 3v64_C Agrin; beta propeller, 98.7 1.7E-05 5.8E-10 63.8 24.6 198 61-298 34-235 (349)
249 3v65_B Low-density lipoprotein 98.7 1.4E-05 4.8E-10 65.2 24.1 201 60-299 115-320 (386)
250 3v65_B Low-density lipoprotein 98.7 2E-05 6.9E-10 64.3 23.3 158 120-297 116-277 (386)
251 3tc9_A Hypothetical hydrolase; 98.7 4.8E-06 1.6E-10 69.0 19.7 156 128-297 138-301 (430)
252 3hxj_A Pyrrolo-quinoline quino 98.7 1.8E-06 6.2E-11 68.7 16.4 142 135-300 145-286 (330)
253 3mbr_X Glutamine cyclotransfer 98.7 5.7E-06 1.9E-10 62.0 17.7 144 138-301 31-183 (243)
254 3nok_A Glutaminyl cyclase; bet 98.6 8.7E-07 3E-11 67.0 13.1 144 137-301 64-214 (268)
255 1ijq_A LDL receptor, low-densi 98.6 6.5E-05 2.2E-09 59.5 24.6 151 135-297 38-195 (316)
256 4hw6_A Hypothetical protein, I 98.6 0.00014 4.7E-09 60.3 26.6 163 127-296 228-432 (433)
257 3tc9_A Hypothetical hydrolase; 98.6 0.00016 5.3E-09 59.9 27.0 164 128-296 227-429 (430)
258 1mda_H Methylamine dehydrogena 98.6 4.8E-07 1.6E-11 72.9 11.2 148 128-297 67-240 (368)
259 3q7m_A Lipoprotein YFGL, BAMB; 98.6 8.4E-06 2.9E-10 66.3 18.7 200 71-301 52-262 (376)
260 1ijq_A LDL receptor, low-densi 98.6 0.00013 4.5E-09 57.7 27.0 205 60-299 29-240 (316)
261 2p4o_A Hypothetical protein; p 98.6 7E-05 2.4E-09 59.0 22.7 191 61-284 72-276 (306)
262 1yiq_A Quinohemoprotein alcoho 98.5 7.9E-06 2.7E-10 71.9 18.7 209 72-301 70-342 (689)
263 3p5b_L Low density lipoprotein 98.5 0.00014 4.7E-09 59.6 25.0 207 59-300 110-323 (400)
264 3m0c_C LDL receptor, low-densi 98.5 7.9E-05 2.7E-09 66.2 24.6 206 59-299 422-634 (791)
265 3sov_A LRP-6, low-density lipo 98.5 0.00018 6E-09 57.0 24.4 201 62-300 36-241 (318)
266 3q7m_A Lipoprotein YFGL, BAMB; 98.5 1.6E-05 5.4E-10 64.6 18.9 148 138-301 188-341 (376)
267 2p9w_A MAL S 1 allergenic prot 98.5 3.4E-05 1.2E-09 60.4 18.6 165 128-298 14-216 (334)
268 3p5b_L Low density lipoprotein 98.5 0.00025 8.6E-09 58.1 24.6 159 120-298 112-278 (400)
269 4a2l_A BT_4663, two-component 98.4 0.00042 1.4E-08 62.2 27.4 215 60-299 214-438 (795)
270 1kv9_A Type II quinohemoprotei 98.4 5.7E-05 2E-09 66.2 20.6 167 133-301 236-492 (668)
271 3qqz_A Putative uncharacterize 98.4 0.00031 1E-08 53.4 21.6 164 120-297 27-204 (255)
272 2ad6_A Methanol dehydrogenase 98.4 9.7E-05 3.3E-09 63.5 21.2 56 244-301 443-498 (571)
273 3sov_A LRP-6, low-density lipo 98.4 0.0003 1E-08 55.6 22.4 159 121-297 36-197 (318)
274 1k3i_A Galactose oxidase precu 98.4 0.00014 4.7E-09 63.8 21.9 207 65-299 190-499 (656)
275 4hw6_A Hypothetical protein, I 98.3 3.8E-05 1.3E-09 63.6 16.4 154 128-296 140-303 (433)
276 3kya_A Putative phosphatase; s 98.3 0.00011 3.8E-09 61.3 18.9 159 129-296 141-340 (496)
277 4a2l_A BT_4663, two-component 98.3 0.0015 5.1E-08 58.7 27.6 211 60-299 356-573 (795)
278 3m0c_C LDL receptor, low-densi 98.3 0.00066 2.3E-08 60.4 24.8 149 137-298 435-590 (791)
279 1kv9_A Type II quinohemoprotei 98.3 7.8E-05 2.7E-09 65.4 18.4 211 72-301 66-337 (668)
280 1n7d_A LDL receptor, low-densi 98.3 1.1E-05 3.6E-10 71.1 12.8 206 61-301 406-618 (699)
281 3amr_A 3-phytase; beta-propell 98.2 0.001 3.5E-08 52.7 24.4 196 71-296 39-262 (355)
282 2xe4_A Oligopeptidase B; hydro 98.2 0.00013 4.4E-09 65.0 17.9 149 134-297 181-354 (751)
283 2xbg_A YCF48-like protein; pho 98.2 0.0015 5E-08 52.0 23.4 147 135-295 171-320 (327)
284 1w6s_A Methanol dehydrogenase 98.2 0.00094 3.2E-08 57.6 22.2 56 244-301 452-507 (599)
285 2ad6_A Methanol dehydrogenase 98.2 0.0015 5.1E-08 56.1 23.2 166 72-262 115-343 (571)
286 3pbp_A Nucleoporin NUP82; beta 98.1 0.00072 2.5E-08 54.7 19.0 153 137-293 31-208 (452)
287 3v9f_A Two-component system se 98.1 0.0026 8.9E-08 57.0 24.8 205 59-299 405-613 (781)
288 3sre_A PON1, serum paraoxonase 98.1 0.0012 4.1E-08 52.8 20.0 195 61-284 50-285 (355)
289 2p9w_A MAL S 1 allergenic prot 98.1 0.002 6.9E-08 50.5 21.2 180 57-254 9-215 (334)
290 3kya_A Putative phosphatase; s 98.1 0.0032 1.1E-07 52.6 25.9 166 128-300 248-478 (496)
291 3sre_A PON1, serum paraoxonase 98.1 0.0012 4.2E-08 52.7 19.6 145 146-297 81-252 (355)
292 1flg_A Protein (quinoprotein e 98.1 0.0011 3.6E-08 57.2 20.7 57 244-302 465-521 (582)
293 1flg_A Protein (quinoprotein e 98.1 9.7E-05 3.3E-09 63.6 14.2 135 139-283 337-547 (582)
294 3s94_A LRP-6, low-density lipo 98.1 0.0016 5.4E-08 56.5 21.6 203 60-300 39-246 (619)
295 3amr_A 3-phytase; beta-propell 98.0 0.00097 3.3E-08 52.8 18.2 152 135-296 37-209 (355)
296 4a0p_A LRP6, LRP-6, low-densit 98.0 0.0052 1.8E-07 53.4 23.9 157 121-298 38-198 (628)
297 4a0p_A LRP6, LRP-6, low-densit 98.0 0.0071 2.4E-07 52.6 24.7 198 61-299 37-239 (628)
298 3v9f_A Two-component system se 98.0 0.0089 3E-07 53.6 27.0 211 59-299 311-526 (781)
299 1w6s_A Methanol dehydrogenase 97.9 0.0031 1E-07 54.4 20.3 157 141-302 124-347 (599)
300 1n7d_A LDL receptor, low-densi 97.9 5E-05 1.7E-09 66.8 9.1 155 130-297 409-571 (699)
301 1k3i_A Galactose oxidase precu 97.8 0.00094 3.2E-08 58.5 16.1 193 65-284 291-529 (656)
302 3s94_A LRP-6, low-density lipo 97.8 0.014 4.8E-07 50.7 22.4 152 135-298 48-203 (619)
303 1cru_A Protein (soluble quinop 97.7 0.0097 3.3E-07 49.5 20.3 111 131-242 31-162 (454)
304 2xzh_A Clathrin heavy chain 1; 97.6 0.018 6.2E-07 45.0 25.1 197 67-302 73-295 (365)
305 3a9g_A Putative uncharacterize 97.5 0.0052 1.8E-07 49.4 15.4 148 129-283 31-215 (354)
306 2ism_A Putative oxidoreductase 97.5 0.0046 1.6E-07 49.6 14.8 107 129-241 33-152 (352)
307 2g8s_A Glucose/sorbosone dehyd 97.4 0.008 2.7E-07 48.2 15.1 152 128-283 19-214 (353)
308 3ii7_A Kelch-like protein 7; p 97.2 0.045 1.6E-06 42.7 18.2 146 137-299 101-274 (306)
309 2ism_A Putative oxidoreductase 97.2 0.025 8.4E-07 45.4 15.9 105 175-284 32-153 (352)
310 2vpj_A Kelch-like protein 12; 97.2 0.047 1.6E-06 42.5 18.4 146 137-299 112-280 (301)
311 3das_A Putative oxidoreductase 97.2 0.06 2E-06 42.9 18.7 149 129-283 34-219 (347)
312 3a9g_A Putative uncharacterize 97.0 0.09 3.1E-06 42.1 21.9 213 60-297 28-296 (354)
313 3pbp_A Nucleoporin NUP82; beta 97.0 0.011 3.6E-07 48.1 11.6 129 62-199 67-208 (452)
314 1tl2_A L10, protein (tachylect 96.8 0.075 2.6E-06 39.1 13.3 113 61-197 41-157 (236)
315 1xi4_A Clathrin heavy chain; a 96.7 0.086 2.9E-06 49.7 16.3 196 68-302 73-294 (1630)
316 1tl2_A L10, protein (tachylect 96.7 0.087 3E-06 38.7 12.9 144 132-283 46-199 (236)
317 2xn4_A Kelch-like protein 2; s 96.6 0.16 5.5E-06 39.4 19.5 146 137-299 108-278 (302)
318 1bpo_A Protein (clathrin); cla 96.6 0.21 7.3E-06 40.8 26.5 202 66-298 71-332 (494)
319 2g8s_A Glucose/sorbosone dehyd 96.6 0.2 6.7E-06 40.1 25.9 70 224-295 272-350 (353)
320 1zgk_A Kelch-like ECH-associat 96.6 0.19 6.4E-06 39.2 15.9 146 137-299 121-289 (308)
321 4asc_A Kelch repeat and BTB do 96.5 0.2 7E-06 39.2 19.7 146 137-299 98-279 (315)
322 2xbg_A YCF48-like protein; pho 96.5 0.24 8.1E-06 39.1 25.1 194 60-294 35-231 (327)
323 1cru_A Protein (soluble quinop 96.4 0.13 4.4E-06 42.8 14.6 108 175-284 28-162 (454)
324 2uvk_A YJHT; unknown function, 96.4 0.25 8.7E-06 39.4 17.4 54 246-302 286-347 (357)
325 1bpo_A Protein (clathrin); cla 96.3 0.35 1.2E-05 39.6 22.7 107 135-253 74-187 (494)
326 3ott_A Two-component system se 96.2 0.64 2.2E-05 41.4 24.8 200 60-298 62-261 (758)
327 2vpj_A Kelch-like protein 12; 96.1 0.23 7.8E-06 38.5 13.7 146 137-299 62-233 (301)
328 3sbq_A Nitrous-oxide reductase 96.0 0.048 1.6E-06 45.9 9.5 108 175-284 324-453 (638)
329 3ii7_A Kelch-like protein 7; p 95.9 0.25 8.5E-06 38.4 13.3 146 137-299 55-227 (306)
330 2be1_A Serine/threonine-protei 95.9 0.012 4.3E-07 46.5 5.6 198 73-301 11-235 (339)
331 2xn4_A Kelch-like protein 2; s 95.8 0.32 1.1E-05 37.7 13.4 146 137-299 61-231 (302)
332 2wg3_C Hedgehog-interacting pr 95.7 0.57 1.9E-05 39.0 14.9 109 175-284 15-157 (463)
333 3das_A Putative oxidoreductase 95.7 0.63 2.1E-05 37.0 25.4 112 175-288 203-330 (347)
334 2be1_A Serine/threonine-protei 95.6 0.14 4.7E-06 40.6 10.5 117 139-263 11-139 (339)
335 2zwa_A Leucine carboxyl methyl 95.4 1.3 4.4E-05 39.1 20.1 154 137-299 451-637 (695)
336 1zgk_A Kelch-like ECH-associat 95.2 0.53 1.8E-05 36.6 12.8 146 137-299 70-242 (308)
337 3s25_A Hypothetical 7-bladed b 95.2 0.59 2E-05 36.4 12.8 139 135-298 61-217 (302)
338 2woz_A Kelch repeat and BTB do 94.9 1.1 3.6E-05 35.1 20.9 146 137-299 109-289 (318)
339 4asc_A Kelch repeat and BTB do 94.7 1.1 3.9E-05 34.8 14.6 147 136-299 44-223 (315)
340 2woz_A Kelch repeat and BTB do 94.4 1.3 4.4E-05 34.6 13.2 147 136-299 55-233 (318)
341 2xzh_A Clathrin heavy chain 1; 94.1 1.7 5.8E-05 34.3 27.5 154 135-298 160-333 (365)
342 1xi4_A Clathrin heavy chain; a 93.4 5.7 0.0002 38.1 18.4 155 135-297 159-331 (1630)
343 3ei3_A DNA damage-binding prot 93.1 5.8 0.0002 37.3 24.8 150 133-296 468-635 (1158)
344 2uvk_A YJHT; unknown function, 93.1 2 6.9E-05 34.1 12.2 26 137-162 65-100 (357)
345 2wg3_C Hedgehog-interacting pr 92.6 1.5 5.3E-05 36.4 11.0 112 129-243 16-158 (463)
346 2zwa_A Leucine carboxyl methyl 92.1 5.9 0.0002 34.9 15.8 154 137-299 397-579 (695)
347 3sbq_A Nitrous-oxide reductase 92.1 0.18 6.1E-06 42.6 4.7 118 61-190 323-451 (638)
348 3q6k_A 43.2 kDa salivary prote 90.7 5.6 0.00019 32.0 18.6 146 149-297 124-306 (381)
349 3s25_A Hypothetical 7-bladed b 90.3 5.3 0.00018 31.0 18.1 134 135-295 153-291 (302)
350 4gq2_M Nucleoporin NUP120; bet 90.2 5.8 0.0002 36.5 13.1 32 135-166 244-275 (950)
351 4gq2_M Nucleoporin NUP120; bet 89.5 1.7 5.8E-05 39.9 9.0 38 61-98 236-273 (950)
352 3uc1_A DNA gyrase subunit A; D 88.0 8.4 0.00029 30.3 22.0 152 137-297 108-279 (327)
353 3no0_A DNA gyrase subunit A; D 85.6 10 0.00035 28.9 17.2 151 137-297 79-246 (276)
354 3b7f_A Glycosyl hydrolase, BNR 83.2 16 0.00056 29.3 18.2 106 140-251 24-144 (394)
355 3ei3_A DNA damage-binding prot 81.2 37 0.0013 32.1 24.2 104 138-253 523-635 (1158)
356 3zwu_A Alkaline phosphatase PH 80.2 7.1 0.00024 33.6 7.9 60 128-191 477-548 (592)
357 4fhn_B Nucleoporin NUP120; pro 79.9 41 0.0014 31.7 15.8 35 267-302 239-273 (1139)
358 3ott_A Two-component system se 79.3 34 0.0012 30.4 27.7 216 61-299 324-547 (758)
359 3zwu_A Alkaline phosphatase PH 78.7 9.6 0.00033 32.8 8.3 59 225-284 478-549 (592)
360 4fhn_B Nucleoporin NUP120; pro 78.4 46 0.0016 31.4 15.7 37 225-262 240-276 (1139)
361 4a9v_A PHOX; hydrolase, beta-p 78.1 9.6 0.00033 32.6 7.9 59 129-191 478-548 (592)
362 3q6k_A 43.2 kDa salivary prote 77.9 26 0.00088 28.3 21.8 136 146-284 179-342 (381)
363 1zi0_A DNA gyrase subunit A; b 72.2 32 0.0011 26.7 23.4 155 137-297 108-277 (307)
364 4a9v_A PHOX; hydrolase, beta-p 71.5 23 0.00079 30.3 8.6 60 224-284 477-549 (592)
365 1zi0_A DNA gyrase subunit A; b 70.0 36 0.0012 26.4 17.1 156 137-297 2-176 (307)
366 3f7f_A Nucleoporin NUP120; nuc 68.0 8.3 0.00028 33.9 5.4 33 267-302 223-255 (729)
367 3f7f_A Nucleoporin NUP120; nuc 67.2 13 0.00046 32.7 6.5 30 137-166 230-259 (729)
368 1suu_A DNA gyrase subunit A; t 63.8 50 0.0017 25.7 24.7 108 138-253 114-230 (312)
369 3l6v_A GYRA, DNA gyrase subuni 63.2 57 0.0019 26.1 25.1 62 137-202 112-179 (370)
370 1wp5_A Topoisomerase IV; broke 60.3 59 0.002 25.4 24.3 154 138-297 106-277 (323)
371 3uc1_A DNA gyrase subunit A; D 58.9 63 0.0022 25.3 20.3 168 61-253 95-278 (327)
372 1sqj_A OXG-RCBH, oligoxylogluc 57.4 1.1E+02 0.0037 27.5 17.6 158 119-284 14-188 (789)
373 1q47_A Semaphorin 3A; beta pro 53.3 47 0.0016 27.9 7.3 56 236-292 422-487 (495)
374 1suu_A DNA gyrase subunit A; t 50.5 86 0.003 24.3 22.9 203 70-297 6-231 (312)
375 2cn3_A Xyloglucanase, beta-1,4 49.8 1.4E+02 0.0048 26.5 15.8 116 121-244 24-153 (737)
376 3b7f_A Glycosyl hydrolase, BNR 48.1 1E+02 0.0035 24.5 20.5 96 175-274 279-391 (394)
377 3qhy_B Beta-lactamase inhibito 47.8 89 0.0031 23.7 18.3 127 147-296 80-206 (282)
378 4gz8_A Semaphorin-3A; multi-do 46.6 82 0.0028 27.6 7.9 56 236-292 430-495 (667)
379 3al9_A Plexin-A2; beta-propell 43.2 53 0.0018 28.0 6.1 67 225-292 402-476 (539)
380 1wp5_A Topoisomerase IV; broke 42.6 1.2E+02 0.0041 23.7 17.5 152 136-297 3-174 (323)
381 3l6v_A GYRA, DNA gyrase subuni 42.2 1.3E+02 0.0045 24.0 20.5 162 68-253 3-179 (370)
382 3nvq_A Semaphorin-7A; beta-pro 41.1 95 0.0033 26.8 7.3 56 236-292 381-444 (590)
383 1ukf_A Avirulence protein AVRP 39.4 52 0.0018 23.2 4.5 35 222-256 118-152 (188)
384 2zux_A YESW protein; beta-prop 36.8 2E+02 0.007 24.7 17.7 43 220-262 361-408 (591)
385 3no0_A DNA gyrase subunit A; D 34.8 1.5E+02 0.0051 22.5 18.8 165 60-253 67-245 (276)
386 1olz_A Semaphorin 4D; developm 32.8 2E+02 0.0067 25.3 8.2 56 236-292 416-477 (663)
387 3qhy_B Beta-lactamase inhibito 31.7 1.7E+02 0.0057 22.2 19.1 92 141-253 114-206 (282)
388 4hvt_A Ritya.17583.B, post-pro 31.5 2.8E+02 0.0095 24.6 22.2 100 193-296 319-429 (711)
389 3ol2_B Plexin-B1; beta-propell 27.8 1.6E+02 0.0055 25.0 6.5 67 225-292 389-461 (528)
390 3oky_B Putative uncharacterize 26.6 2.3E+02 0.0079 24.3 7.3 67 225-292 405-495 (565)
391 2cn3_A Xyloglucanase, beta-1,4 25.7 2.9E+02 0.0098 24.5 8.2 52 224-276 24-82 (737)
392 4hvt_A Ritya.17583.B, post-pro 24.4 1.6E+02 0.0054 26.1 6.2 74 225-298 131-226 (711)
393 3hx6_A Type 4 fimbrial biogene 24.2 3.4E+02 0.012 23.3 14.7 157 139-298 86-285 (570)
394 3oky_A Plexin-A2; transmembran 24.1 2E+02 0.0067 25.4 6.6 57 235-292 412-475 (681)
395 3al9_A Plexin-A2; beta-propell 22.5 3.6E+02 0.012 22.9 8.3 63 137-202 412-479 (539)
396 1q47_A Semaphorin 3A; beta pro 22.5 2.8E+02 0.0096 23.3 7.1 60 139-201 422-489 (495)
397 3kci_A Probable E3 ubiquitin-p 20.4 3.3E+02 0.011 21.7 24.1 215 62-297 106-345 (389)
No 1
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=257.49 Aligned_cols=241 Identities=14% Similarity=0.168 Sum_probs=184.0
Q ss_pred cccccCcceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccC
Q 022019 28 NQQEYTWPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQ 107 (304)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~ 107 (304)
+...+.|....|...................|...|.+++|+|++ .|++|+.||+|+|||+.+++....
T Consensus 50 d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~---------- 118 (344)
T 4gqb_B 50 SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIV---------- 118 (344)
T ss_dssp CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEE----------
T ss_pred CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeE----------
Confidence 445666754444332222211111122334567889999999985 788999999999999987643211
Q ss_pred CccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCc-
Q 022019 108 DSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGT- 186 (304)
Q Consensus 108 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~- 186 (304)
.......|...|.+++| +|++++|++|+.|++|++||+++++.+..+..|.. .|.+++|+|++.
T Consensus 119 ---~~~~~~~H~~~V~~v~~-------spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~-----~V~~~~~~~~~~~ 183 (344)
T 4gqb_B 119 ---SKFCKYEHDDIVSTVSV-------LSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAA-----QVTCVAASPHKDS 183 (344)
T ss_dssp ---EEEEEECCSSCEEEEEE-------CTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS-----CEEEEEECSSCTT
T ss_pred ---eeccccCCCCCEEEEEE-------CCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCC-----ceEEEEecCCCCC
Confidence 11133467789999988 77999999999999999999999999988887665 999999999885
Q ss_pred EEEE-EcCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEecccc
Q 022019 187 KIFA-GYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQE 265 (304)
Q Consensus 187 ~l~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 265 (304)
++++ +.|+.|++||++.... . ..+. ...+...+.+++|+|+++.+|++|+.||.|++||+++++++.++.+|.
T Consensus 184 ~l~s~s~D~~v~iwd~~~~~~-~---~~~~--~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~ 257 (344)
T 4gqb_B 184 VFLSCSEDNRILLWDTRCPKP-A---SQIG--CSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHS 257 (344)
T ss_dssp EEEEEETTSCEEEEETTSSSC-E---EECC------CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCS
T ss_pred ceeeeccccccccccccccce-e---eeee--cceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCC
Confidence 5665 4999999999987422 1 1111 133455689999999888899999999999999999999999999999
Q ss_pred CCeEEEEECCCC-cEEEEeeccCCeEEEEecccceee
Q 022019 266 GGVTHVQFSRDG-NYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 266 ~~v~~~~~~~~~-~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
..|++++|+|+| ++|++|+ .|++|+|||+++++.+
T Consensus 258 ~~v~~v~fsp~g~~~lasgs-~D~~i~vwd~~~~~~~ 293 (344)
T 4gqb_B 258 QCVTGLVFSPHSVPFLASLS-EDCSLAVLDSSLSELF 293 (344)
T ss_dssp SCEEEEEECSSSSCCEEEEE-TTSCEEEECTTCCEEE
T ss_pred CCEEEEEEccCCCeEEEEEe-CCCeEEEEECCCCcEE
Confidence 999999999998 5789999 9999999999988654
No 2
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.1e-38 Score=256.37 Aligned_cols=212 Identities=15% Similarity=0.215 Sum_probs=178.2
Q ss_pred ceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCc
Q 022019 51 NQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPH 130 (304)
Q Consensus 51 ~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 130 (304)
+....+.+|.+.|++++|+|++++|++|+.||+|++||+.++.... ....+...|.+++|
T Consensus 46 ~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~-----------------~~~~~~~~v~~~~~--- 105 (340)
T 1got_B 46 RTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVH-----------------AIPLRSSWVMTCAY--- 105 (340)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEE-----------------EEECSSSCEEEEEE---
T ss_pred hhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcce-----------------EeecCCccEEEEEE---
Confidence 4456889999999999999999999999999999999987653321 22345567888877
Q ss_pred cceeCCCccEEEEEeCCCCEEEEEcCCCe----eeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCc
Q 022019 131 MSASDPTSCVFASTTRDHPIHLWDATTGL----LRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGR 206 (304)
Q Consensus 131 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~ 206 (304)
+|++++|++|+.|+.|++|++.++. ....+..|. ..|.++.|++++.+++++.|+.|++||+++..
T Consensus 106 ----s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~-----~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~- 175 (340)
T 1got_B 106 ----APSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHT-----GYLSCCRFLDDNQIVTSSGDTTCALWDIETGQ- 175 (340)
T ss_dssp ----CTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCS-----SCEEEEEEEETTEEEEEETTSCEEEEETTTTE-
T ss_pred ----CCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCC-----ccEEEEEECCCCcEEEEECCCcEEEEECCCCc-
Confidence 7799999999999999999998753 333344443 38999999998875556799999999998731
Q ss_pred cceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeecc
Q 022019 207 DFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRK 286 (304)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~ 286 (304)
......+|...|.+++|+| ++.++++|+.||.|++||++++.++..+.+|...|++++|+|++.+|++++ .
T Consensus 176 -------~~~~~~~h~~~v~~~~~~~-~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s-~ 246 (340)
T 1got_B 176 -------QTTTFTGHTGDVMSLSLAP-DTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGS-D 246 (340)
T ss_dssp -------EEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEE-T
T ss_pred -------EEEEEcCCCCceEEEEECC-CCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEc-C
Confidence 1222367888999999999 778999999999999999999999999999999999999999999999999 9
Q ss_pred CCeEEEEecccceee
Q 022019 287 DPYILCWDLRKAVQV 301 (304)
Q Consensus 287 d~~i~vwd~~~~~~~ 301 (304)
||+|++||+++++.+
T Consensus 247 d~~v~iwd~~~~~~~ 261 (340)
T 1got_B 247 DATCRLFDLRADQEL 261 (340)
T ss_dssp TSCEEEEETTTTEEE
T ss_pred CCcEEEEECCCCcEE
Confidence 999999999987654
No 3
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=3.3e-38 Score=254.95 Aligned_cols=226 Identities=17% Similarity=0.171 Sum_probs=176.1
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEE
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (304)
.+.+|++......... ...+.+|.+.|++++|+|+|++|++|+.||+|++||+.++... ..
T Consensus 104 ~v~lWd~~~~~~~~~~--~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~-----------------~~ 164 (344)
T 4gqb_B 104 AVELWELDENETLIVS--KFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVL-----------------SS 164 (344)
T ss_dssp EEEEEEECTTSSCEEE--EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE-----------------EE
T ss_pred EEEEEeccCCCceeEe--eccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEE-----------------EE
Confidence 3556666655443321 1245689999999999999999999999999999999865432 23
Q ss_pred EeecCCeEEEEeecCccceeCCCc-cEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCC-CcEEEEE-
Q 022019 115 VVTEGESVYDFCWFPHMSASDPTS-CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPT-GTKIFAG- 191 (304)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~-~~~l~~~- 191 (304)
...|...|.+++| ++++ .+|++++.|++|++||+++++....+.... +...+.+++|+|+ ++++++|
T Consensus 165 ~~~h~~~V~~~~~-------~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~---~~~~~~~~~~~p~~~~~l~sg~ 234 (344)
T 4gqb_B 165 YRAHAAQVTCVAA-------SPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSA---PGYLPTSLAWHPQQSEVFVFGD 234 (344)
T ss_dssp ECCCSSCEEEEEE-------CSSCTTEEEEEETTSCEEEEETTSSSCEEECC-------CCCEEEEEECSSCTTEEEEEE
T ss_pred EcCcCCceEEEEe-------cCCCCCceeeeccccccccccccccceeeeeecce---eeccceeeeecCCCCcceEEec
Confidence 3457789999988 5555 578999999999999999998877664332 2226889999995 5677765
Q ss_pred cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEE
Q 022019 192 YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHV 271 (304)
Q Consensus 192 ~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~ 271 (304)
.|+.|++||+++.. . .....+|...|++++|+|++..+|++|+.|+.|+|||+++++++ .+.+|.+.|+++
T Consensus 235 ~dg~v~~wd~~~~~-~-------~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v 305 (344)
T 4gqb_B 235 ENGTVSLVDTKSTS-C-------VLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDA 305 (344)
T ss_dssp TTSEEEEEESCC---C-------CEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEE
T ss_pred cCCcEEEEECCCCc-E-------EEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEE
Confidence 89999999998742 1 12236788899999999966678999999999999999988765 578899999999
Q ss_pred EECCCCc-EEEEeeccCCeEEEEecccce
Q 022019 272 QFSRDGN-YLYTGGRKDPYILCWDLRKAV 299 (304)
Q Consensus 272 ~~~~~~~-~l~~~~~~d~~i~vwd~~~~~ 299 (304)
+|+|++. +|++++ .|++|++|++.+..
T Consensus 306 ~~sp~~~~llas~s-~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 306 TWSPLNHSLLTTVG-WDHQVVHHVVPTEP 333 (344)
T ss_dssp EECSSSTTEEEEEE-TTSCEEEEECCC--
T ss_pred EEeCCCCeEEEEEc-CCCeEEEEECCCCC
Confidence 9999986 566888 99999999997653
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.3e-38 Score=252.34 Aligned_cols=204 Identities=19% Similarity=0.316 Sum_probs=177.7
Q ss_pred eeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccc
Q 022019 53 FRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMS 132 (304)
Q Consensus 53 ~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 132 (304)
+..+..|...+.+++|+|++++|++|+.||.|++|++.++.... ....+...+.+++|
T Consensus 115 ~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~-----------------~~~~~~~~v~~~~~----- 172 (321)
T 3ow8_A 115 IKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEY-----------------SLDTRGKFILSIAY----- 172 (321)
T ss_dssp EEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEE-----------------EEECSSSCEEEEEE-----
T ss_pred EEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeE-----------------EecCCCceEEEEEE-----
Confidence 34667889999999999999999999999999999998654321 22334567888877
Q ss_pred eeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceee
Q 022019 133 ASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKY 211 (304)
Q Consensus 133 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~ 211 (304)
+|++++|++|+.||.|++||+++++....+..+.. .|.+++|+|++++|+++ .|+.|++||++...
T Consensus 173 --spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~-----~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~------ 239 (321)
T 3ow8_A 173 --SPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAM-----PIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN------ 239 (321)
T ss_dssp --CTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS-----CCCEEEECTTSCEEEEECTTSCEEEEETTTCC------
T ss_pred --CCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCC-----ceeEEEEcCCCCEEEEEcCCCeEEEEECCCcc------
Confidence 78999999999999999999999998888876654 89999999999999966 99999999998632
Q ss_pred eeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEE
Q 022019 212 STLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYIL 291 (304)
Q Consensus 212 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~ 291 (304)
......+|...|.+++|+| ++.+|++|+.|+.|++||+++++++.++.+|...|.+++|+|+|.+|++++ .||.|+
T Consensus 240 --~~~~~~~h~~~v~~~~~sp-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~-~d~~i~ 315 (321)
T 3ow8_A 240 --LAGTLSGHASWVLNVAFCP-DDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVG-DDQEIH 315 (321)
T ss_dssp --EEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE-TTCCEE
T ss_pred --eeEEEcCCCCceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEe-CCCeEE
Confidence 1222367888999999999 777999999999999999999999999999999999999999999999999 999999
Q ss_pred EEec
Q 022019 292 CWDL 295 (304)
Q Consensus 292 vwd~ 295 (304)
+||.
T Consensus 316 vwd~ 319 (321)
T 3ow8_A 316 IYDC 319 (321)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 9996
No 5
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=3.8e-38 Score=261.08 Aligned_cols=210 Identities=20% Similarity=0.300 Sum_probs=182.0
Q ss_pred eeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccce
Q 022019 54 RTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSA 133 (304)
Q Consensus 54 ~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 133 (304)
+.+.+|.+.|++++|+|++++|++|+.||+|++||+.+..... ....|...|.+++|
T Consensus 144 ~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~-----------------~~~~h~~~V~~v~~------ 200 (410)
T 1vyh_C 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIR-----------------TMHGHDHNVSSVSI------ 200 (410)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEE-----------------CCCCCSSCEEEEEE------
T ss_pred EEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeE-----------------EEcCCCCCEEEEEE------
Confidence 4788999999999999999999999999999999997654322 12345678999888
Q ss_pred eCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeee
Q 022019 134 SDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYS 212 (304)
Q Consensus 134 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~ 212 (304)
+|++++|++|+.|++|++||++++.....+..+.. .|.++.|+|++.+++++ .|+.|++||++...
T Consensus 201 -~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~-----~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~------- 267 (410)
T 1vyh_C 201 -MPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE-----WVRMVRPNQDGTLIASCSNDQTVRVWVVATKE------- 267 (410)
T ss_dssp -CSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSS-----CEEEEEECTTSSEEEEEETTSCEEEEETTTCC-------
T ss_pred -eCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCc-----cEEEEEECCCCCEEEEEcCCCeEEEEECCCCc-------
Confidence 67899999999999999999999998888876654 89999999999999965 99999999998632
Q ss_pred eeeccccccccceeEEEeecCC-------------------CcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEE
Q 022019 213 TLKGNKEGQAGIMSAIAFSPTH-------------------TGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQF 273 (304)
Q Consensus 213 ~~~~~~~~~~~~v~~~~~~p~~-------------------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~ 273 (304)
......+|...|.+++|+|+. +.+|++|+.|+.|++||++++.++..+.+|...|++++|
T Consensus 268 -~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~ 346 (410)
T 1vyh_C 268 -CKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLF 346 (410)
T ss_dssp -EEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE
T ss_pred -eeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEE
Confidence 112235788889999999942 568999999999999999999999999999999999999
Q ss_pred CCCCcEEEEeeccCCeEEEEecccceee
Q 022019 274 SRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 274 ~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
+|+|++|++++ .||.|++||+++++++
T Consensus 347 ~~~g~~l~s~s-~D~~i~vwd~~~~~~~ 373 (410)
T 1vyh_C 347 HSGGKFILSCA-DDKTLRVWDYKNKRCM 373 (410)
T ss_dssp CSSSSCEEEEE-TTTEEEEECCTTSCCC
T ss_pred cCCCCEEEEEe-CCCeEEEEECCCCceE
Confidence 99999999999 9999999999887654
No 6
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.2e-37 Score=246.56 Aligned_cols=224 Identities=17% Similarity=0.273 Sum_probs=183.1
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEE
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (304)
.+..|+...... ++.+.+|..+|.+++|+|++++|++|+.|++|++||+.+++.. ..
T Consensus 36 ~v~lWd~~~~~~------~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~-----------------~~ 92 (304)
T 2ynn_A 36 RVELWNYETQVE------VRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKV-----------------VD 92 (304)
T ss_dssp EEEEEETTTTEE------EEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEE-----------------EE
T ss_pred cEEEEECCCCce------eEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEE-----------------EE
Confidence 345566665443 3367789999999999999999999999999999999865432 13
Q ss_pred EeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCC-eeeEEeecccccccccceEEEEECC-CCcEEEEE-
Q 022019 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTG-LLRCTYRAYDAVDEITAAFSVAFNP-TGTKIFAG- 191 (304)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~~~- 191 (304)
...|...|.+++| +|++.+|++|+.||+|++||++++ .....+..|.. .|.+++|+| ++..|++|
T Consensus 93 ~~~h~~~v~~~~~-------~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~-----~v~~v~~~p~~~~~l~sgs 160 (304)
T 2ynn_A 93 FEAHPDYIRSIAV-------HPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEH-----FVMCVAFNPKDPSTFASGC 160 (304)
T ss_dssp EECCSSCEEEEEE-------CSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCS-----CEEEEEECTTCTTEEEEEE
T ss_pred EeCCCCcEEEEEE-------cCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCC-----cEEEEEECCCCCCEEEEEe
Confidence 3456788999988 778999999999999999999877 44455555544 899999999 57888855
Q ss_pred cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecC-CCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEE
Q 022019 192 YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPT-HTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTH 270 (304)
Q Consensus 192 ~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~ 270 (304)
.|+.|++||++....... + ..++...+..+.|+|. ++.+|++|+.|+.|++||+++++++..+.+|...|.+
T Consensus 161 ~D~~v~iwd~~~~~~~~~----~---~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~ 233 (304)
T 2ynn_A 161 LDRTVKVWSLGQSTPNFT----L---TTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSF 233 (304)
T ss_dssp TTSEEEEEETTCSSCSEE----E---ECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEE
T ss_pred CCCeEEEEECCCCCccce----e---ccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEE
Confidence 999999999976432211 1 1345567888999873 4569999999999999999999999999999999999
Q ss_pred EEECCCCcEEEEeeccCCeEEEEecccceee
Q 022019 271 VQFSRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 271 ~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
++|+|++++|++++ .||+|++||+++++.+
T Consensus 234 ~~~~p~~~~l~s~s-~Dg~i~iWd~~~~~~~ 263 (304)
T 2ynn_A 234 AVFHPTLPIIISGS-EDGTLKIWNSSTYKVE 263 (304)
T ss_dssp EEECSSSSEEEEEE-TTSCEEEEETTTCCEE
T ss_pred EEECCCCCEEEEEc-CCCeEEEEECCCCcee
Confidence 99999999999999 9999999999987654
No 7
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=6.8e-38 Score=249.53 Aligned_cols=212 Identities=21% Similarity=0.287 Sum_probs=179.3
Q ss_pred eeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccc
Q 022019 53 FRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMS 132 (304)
Q Consensus 53 ~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 132 (304)
.+.+.+|.+.|++++|+|++++|++|+.||+|++||+.++... .....+..+|.+++|
T Consensus 6 ~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~-----------------~~~~~~~~~v~~~~~----- 63 (304)
T 2ynn_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEV-----------------RSIQVTETPVRAGKF----- 63 (304)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEE-----------------EEEECCSSCEEEEEE-----
T ss_pred EEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcee-----------------EEeeccCCcEEEEEE-----
Confidence 4478899999999999999999999999999999999865321 123345578888877
Q ss_pred eeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceee
Q 022019 133 ASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKY 211 (304)
Q Consensus 133 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~ 211 (304)
+|++++|++|+.|+.|++||+.+++....+..|.. .|.+++|+|+++++++| .|++|++||++...
T Consensus 64 --~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~------ 130 (304)
T 2ynn_A 64 --IARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPD-----YIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW------ 130 (304)
T ss_dssp --EGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSS-----CEEEEEECSSSSEEEEEETTSCEEEEEGGGTT------
T ss_pred --eCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCC-----cEEEEEEcCCCCEEEEECCCCeEEEEECCCCc------
Confidence 66899999999999999999999998888887665 89999999999999965 99999999997632
Q ss_pred eeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEec-cccCCeEEEEECC--CCcEEEEeeccCC
Q 022019 212 STLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH-GQEGGVTHVQFSR--DGNYLYTGGRKDP 288 (304)
Q Consensus 212 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~--~~~~l~~~~~~d~ 288 (304)
.+.....+|...|.+++|+|.++.+|++|+.|+.|++||++...+...+. +|...+..+.|+| ++.+|++++ .|+
T Consensus 131 -~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s-~D~ 208 (304)
T 2ynn_A 131 -ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITAS-DDL 208 (304)
T ss_dssp -EEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEE-TTS
T ss_pred -chhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEc-CCC
Confidence 12222367888999999999777899999999999999998877666664 5667899999986 778999999 999
Q ss_pred eEEEEecccceee
Q 022019 289 YILCWDLRKAVQV 301 (304)
Q Consensus 289 ~i~vwd~~~~~~~ 301 (304)
+|++||+++++++
T Consensus 209 ~i~iWd~~~~~~~ 221 (304)
T 2ynn_A 209 TIKIWDYQTKSCV 221 (304)
T ss_dssp EEEEEETTTTEEE
T ss_pred eEEEEeCCCCccc
Confidence 9999999998765
No 8
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.9e-38 Score=252.60 Aligned_cols=209 Identities=19% Similarity=0.278 Sum_probs=179.6
Q ss_pred eeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccce
Q 022019 54 RTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSA 133 (304)
Q Consensus 54 ~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 133 (304)
..+.+|...|.+++|++++.++++++.|++|++||+.++.... ....+...+..++|
T Consensus 74 ~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~-----------------~~~~~~~~~~~~~~------ 130 (321)
T 3ow8_A 74 WSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIK-----------------SIDAGPVDAWTLAF------ 130 (321)
T ss_dssp EEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEE-----------------EEECCTTCCCCEEE------
T ss_pred eeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEE-----------------EEeCCCccEEEEEE------
Confidence 3678999999999999999999999999999999998653321 11223345555655
Q ss_pred eCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeee
Q 022019 134 SDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYS 212 (304)
Q Consensus 134 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~ 212 (304)
+|++++|++++.||.|++||+++++....+..+.. .+.+++|+|++++|+++ .|+.|++||+++. +
T Consensus 131 -spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~-----~v~~~~~spdg~~lasg~~dg~i~iwd~~~~----~--- 197 (321)
T 3ow8_A 131 -SPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGK-----FILSIAYSPDGKYLASGAIDGIINIFDIATG----K--- 197 (321)
T ss_dssp -CTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSS-----CEEEEEECTTSSEEEEEETTSCEEEEETTTT----E---
T ss_pred -CCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCc-----eEEEEEECCCCCEEEEEcCCCeEEEEECCCC----c---
Confidence 88999999999999999999999988777766554 89999999999999966 9999999999863 1
Q ss_pred eeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEE
Q 022019 213 TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILC 292 (304)
Q Consensus 213 ~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~v 292 (304)
......+|..+|.+++|+| ++.+|++|+.|+.|++||++.++++..+.+|...|.+++|+|++++|++++ .|++|++
T Consensus 198 -~~~~~~~h~~~v~~l~~sp-d~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s-~D~~v~i 274 (321)
T 3ow8_A 198 -LLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSS-SDKSVKV 274 (321)
T ss_dssp -EEEEECCCSSCCCEEEECT-TSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE-TTSCEEE
T ss_pred -EEEEEcccCCceeEEEEcC-CCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEe-CCCcEEE
Confidence 1222367888999999999 778999999999999999999999999999999999999999999999999 9999999
Q ss_pred Eecccceee
Q 022019 293 WDLRKAVQV 301 (304)
Q Consensus 293 wd~~~~~~~ 301 (304)
||+++++++
T Consensus 275 wd~~~~~~~ 283 (321)
T 3ow8_A 275 WDVGTRTCV 283 (321)
T ss_dssp EETTTTEEE
T ss_pred EeCCCCEEE
Confidence 999998765
No 9
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.2e-37 Score=258.16 Aligned_cols=209 Identities=20% Similarity=0.286 Sum_probs=182.3
Q ss_pred eeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccce
Q 022019 54 RTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSA 133 (304)
Q Consensus 54 ~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 133 (304)
..+.+|.++|++++|+|++.+|++|+.||+|+|||+.++.... ....|...|.+++|
T Consensus 102 ~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~-----------------~l~~h~~~V~~v~~------ 158 (410)
T 1vyh_C 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER-----------------TLKGHTDSVQDISF------ 158 (410)
T ss_dssp CEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCE-----------------EECCCSSCEEEEEE------
T ss_pred EeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE-----------------EEeccCCcEEEEEE------
Confidence 3678999999999999999999999999999999998664322 33456688999988
Q ss_pred eCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeee
Q 022019 134 SDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYS 212 (304)
Q Consensus 134 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~ 212 (304)
+|++++|++|+.|++|++||+.+++....+..|.. .|.+++|+|++.+++++ .|+.|++||++++. ...
T Consensus 159 -~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~-----~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~----~~~ 228 (410)
T 1vyh_C 159 -DHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDH-----NVSSVSIMPNGDHIVSASRDKTIKMWEVQTGY----CVK 228 (410)
T ss_dssp -CTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSS-----CEEEEEECSSSSEEEEEETTSEEEEEETTTCC----EEE
T ss_pred -cCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCC-----CEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc----EEE
Confidence 77899999999999999999999888877776654 89999999999999965 99999999998742 112
Q ss_pred eeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCC----------------
Q 022019 213 TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRD---------------- 276 (304)
Q Consensus 213 ~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~---------------- 276 (304)
...+|...|.++.|+| ++.+|++|+.|+.|++||++++++...+.+|...|.+++|+|+
T Consensus 229 ----~~~~h~~~v~~~~~~~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 303 (410)
T 1vyh_C 229 ----TFTGHREWVRMVRPNQ-DGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKK 303 (410)
T ss_dssp ----EEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC---
T ss_pred ----EEeCCCccEEEEEECC-CCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccc
Confidence 2257888899999999 7889999999999999999999999999999999999999996
Q ss_pred ----CcEEEEeeccCCeEEEEecccceee
Q 022019 277 ----GNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 277 ----~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
|.+|++|+ .|+.|++||+++++++
T Consensus 304 ~~~~g~~l~sgs-~D~~i~iwd~~~~~~~ 331 (410)
T 1vyh_C 304 SGKPGPFLLSGS-RDKTIKMWDVSTGMCL 331 (410)
T ss_dssp ----CCEEEEEE-TTSEEEEEETTTTEEE
T ss_pred cCCCCCEEEEEe-CCCeEEEEECCCCceE
Confidence 67899999 9999999999998765
No 10
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=4.1e-37 Score=250.02 Aligned_cols=229 Identities=20% Similarity=0.285 Sum_probs=181.2
Q ss_pred ceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccc-------ccccc-----------------
Q 022019 51 NQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNAC-------SLAKD----------------- 106 (304)
Q Consensus 51 ~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~-------~~~~~----------------- 106 (304)
+..+.+.+|.+.|++++|+|++++|+||+.||+|++||..+.......... .+.+.
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~ 134 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYP 134 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEE
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEE
Confidence 455688999999999999999999999999999999998766543222111 00000
Q ss_pred -------CCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEE
Q 022019 107 -------QDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSV 179 (304)
Q Consensus 107 -------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i 179 (304)
...........|...|.++.| +|++..|++++.|++|++||+++++....+..|.. .|.++
T Consensus 135 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~-------~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~-----~v~~~ 202 (354)
T 2pbi_B 135 LTFDKNENMAAKKKSVAMHTNYLSACSF-------TNSDMQILTASGDGTCALWDVESGQLLQSFHGHGA-----DVLCL 202 (354)
T ss_dssp CCCCTTCCSGGGCEEEEECSSCEEEEEE-------CSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSS-----CEEEE
T ss_pred EeccccccccccceeeeccCCcEEEEEE-------eCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCC-----CeEEE
Confidence 000112233456667777776 77888999999999999999999999888877664 89999
Q ss_pred EECC--CCcEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCce
Q 022019 180 AFNP--TGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME 256 (304)
Q Consensus 180 ~~~~--~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~ 256 (304)
+|+| ++++|++| .|+.|++||+++.. . .....+|...|.+++|+| ++.+|++|+.|+.|++||++..+
T Consensus 203 ~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~----~----~~~~~~h~~~v~~v~~~p-~~~~l~s~s~D~~v~lwd~~~~~ 273 (354)
T 2pbi_B 203 DLAPSETGNTFVSGGCDKKAMVWDMRSGQ----C----VQAFETHESDVNSVRYYP-SGDAFASGSDDATCRLYDLRADR 273 (354)
T ss_dssp EECCCSSCCEEEEEETTSCEEEEETTTCC----E----EEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTE
T ss_pred EEEeCCCCCEEEEEeCCCeEEEEECCCCc----E----EEEecCCCCCeEEEEEeC-CCCEEEEEeCCCeEEEEECCCCc
Confidence 9988 46788865 99999999998742 1 122367888999999999 77899999999999999999988
Q ss_pred EeEEeccc--cCCeEEEEECCCCcEEEEeeccCCeEEEEecccceee
Q 022019 257 LLYVLHGQ--EGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 257 ~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
.+..+..+ ...+.+++|+|+|.+|++++ .|+.|++||+.+++.+
T Consensus 274 ~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~-~d~~i~vwd~~~~~~~ 319 (354)
T 2pbi_B 274 EVAIYSKESIIFGASSVDFSLSGRLLFAGY-NDYTINVWDVLKGSRV 319 (354)
T ss_dssp EEEEECCTTCCSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTCSEE
T ss_pred EEEEEcCCCcccceeEEEEeCCCCEEEEEE-CCCcEEEEECCCCceE
Confidence 77777543 34789999999999999999 9999999999887654
No 11
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=5.7e-37 Score=245.79 Aligned_cols=216 Identities=18% Similarity=0.288 Sum_probs=181.9
Q ss_pred eeeeecCCCCceeEEEEcCCC-CeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCc
Q 022019 52 QFRTSSIPNNFLKGIKWSPDG-SSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPH 130 (304)
Q Consensus 52 ~~~~~~~h~~~V~~i~~s~~~-~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 130 (304)
....+.+|.+.|++++|+|++ ++|++|+.|++|++|++....... .........|...|.+++|
T Consensus 9 l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~------------~~~~~~~~~h~~~v~~~~~--- 73 (319)
T 3frx_A 9 LRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKF------------GVPVRSFKGHSHIVQDCTL--- 73 (319)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEE------------EEEEEEEECCSSCEEEEEE---
T ss_pred EEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccc------------cccceEEeCCcccEEEEEE---
Confidence 345789999999999999955 899999999999999986322100 1112234567788999887
Q ss_pred cceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccce
Q 022019 131 MSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFE 209 (304)
Q Consensus 131 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~ 209 (304)
+|++++|++|+.|++|++||+.+++....+..|.. .|.+++|+|++.+++++ .|+.|++||++..
T Consensus 74 ----s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~----- 139 (319)
T 3frx_A 74 ----TADGAYALSASWDKTLRLWDVATGETYQRFVGHKS-----DVMSVDIDKKASMIISGSRDKTIKVWTIKGQ----- 139 (319)
T ss_dssp ----CTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSS-----CEEEEEECTTSCEEEEEETTSCEEEEETTSC-----
T ss_pred ----CCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCC-----cEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-----
Confidence 77999999999999999999999998888877665 89999999999999965 9999999999641
Q ss_pred eeeeeeccccccccceeEEEeecC-----CCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEee
Q 022019 210 KYSTLKGNKEGQAGIMSAIAFSPT-----HTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGG 284 (304)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~~~~~p~-----~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 284 (304)
.... ..+|...+.++.|+|. ++..+++++.|+.|++||+++.+....+.+|...|.+++|+|+|++|++++
T Consensus 140 ~~~~----~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~ 215 (319)
T 3frx_A 140 CLAT----LLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAG 215 (319)
T ss_dssp EEEE----ECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEE
T ss_pred eEEE----EeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEe
Confidence 1122 2578888999999984 234899999999999999999999999999999999999999999999999
Q ss_pred ccCCeEEEEecccceee
Q 022019 285 RKDPYILCWDLRKAVQV 301 (304)
Q Consensus 285 ~~d~~i~vwd~~~~~~~ 301 (304)
.||.|++||+++++.+
T Consensus 216 -~dg~i~iwd~~~~~~~ 231 (319)
T 3frx_A 216 -KDGEIMLWNLAAKKAM 231 (319)
T ss_dssp -TTCEEEEEETTTTEEE
T ss_pred -CCCeEEEEECCCCcEE
Confidence 9999999999988765
No 12
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=5.4e-37 Score=251.82 Aligned_cols=236 Identities=19% Similarity=0.317 Sum_probs=172.3
Q ss_pred eeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccc-------cccc-------------------
Q 022019 52 QFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNAC-------SLAK------------------- 105 (304)
Q Consensus 52 ~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~-------~~~~------------------- 105 (304)
..+.+.+|.+.|++++|+|++++|+||+.||+|+|||+.++.....+..+ .+.+
T Consensus 58 ~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~ 137 (380)
T 3iz6_a 58 CCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNL 137 (380)
T ss_dssp EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEEC
T ss_pred EeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEEC
Confidence 34578999999999999999999999999999999998765432111100 0000
Q ss_pred -----------------cC-------------C---------ccceEE----------E-----eecCCeEEEEeecCcc
Q 022019 106 -----------------DQ-------------D---------SYEASL----------V-----VTEGESVYDFCWFPHM 131 (304)
Q Consensus 106 -----------------~~-------------~---------~~~~~~----------~-----~~~~~~v~~~~~~~~~ 131 (304)
++ . ...... . ..|...|.++.|.
T Consensus 138 ~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~--- 214 (380)
T 3iz6_a 138 SSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSIN--- 214 (380)
T ss_dssp CCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEEC---
T ss_pred CCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEee---
Confidence 00 0 000000 0 1122233333332
Q ss_pred ceeCCCccEEEEEeCCCCEEEEEcC-CCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccce
Q 022019 132 SASDPTSCVFASTTRDHPIHLWDAT-TGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFE 209 (304)
Q Consensus 132 ~~~~~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~ 209 (304)
.+++++|++|+.|++|++||++ .+.....+..|.. .|.+++|+|++++|+++ .|++|++||++++. ...
T Consensus 215 ---~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~-----~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~-~~~ 285 (380)
T 3iz6_a 215 ---SLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEG-----DINSVKFFPDGQRFGTGSDDGTCRLFDMRTGH-QLQ 285 (380)
T ss_dssp ---SSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSS-----CCCEEEECTTSSEEEEECSSSCEEEEETTTTE-EEE
T ss_pred ---cCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCC-----CeEEEEEecCCCeEEEEcCCCeEEEEECCCCc-EEE
Confidence 2378899999999999999998 4466666665554 89999999999999966 99999999998742 111
Q ss_pred eeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEe----ccccCCeEEEEECCCCcEEEEeec
Q 022019 210 KYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVL----HGQEGGVTHVQFSRDGNYLYTGGR 285 (304)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~ 285 (304)
.+.........+...+++++|+| ++.+|++|+.||.|++||+..++.+..+ .+|.+.|++++|+|+|.+|++|+
T Consensus 286 ~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs- 363 (380)
T 3iz6_a 286 VYNREPDRNDNELPIVTSVAFSI-SGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGS- 363 (380)
T ss_dssp EECCCCSSSCCSSCSCSEEEECS-SSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEEC-
T ss_pred EecccccccccccCceEEEEECC-CCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEee-
Confidence 11111111122334589999999 7889999999999999999988887777 68999999999999999999999
Q ss_pred cCCeEEEEecccceee
Q 022019 286 KDPYILCWDLRKAVQV 301 (304)
Q Consensus 286 ~d~~i~vwd~~~~~~~ 301 (304)
.|++|++|++...+++
T Consensus 364 ~D~~i~iW~~~~~~~i 379 (380)
T 3iz6_a 364 WDKNLKIWAFSGHRKI 379 (380)
T ss_dssp TTSCEEEEECCSSSSC
T ss_pred CCCCEEEEecCCCccc
Confidence 9999999999987665
No 13
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=6.1e-37 Score=248.30 Aligned_cols=212 Identities=21% Similarity=0.344 Sum_probs=173.6
Q ss_pred eeeeecCCCC-ceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCc
Q 022019 52 QFRTSSIPNN-FLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPH 130 (304)
Q Consensus 52 ~~~~~~~h~~-~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 130 (304)
.+..+.+|.+ .|++++|+|+|++||+|+.|++|+|||+.++.... .......|...|.+++|
T Consensus 7 ~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~--------------~~~~~~~h~~~v~~~~~--- 69 (345)
T 3fm0_A 7 LLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWIC--------------KSVLSEGHQRTVRKVAW--- 69 (345)
T ss_dssp EEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEE--------------EEEECSSCSSCEEEEEE---
T ss_pred EeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCccee--------------eeeeccccCCcEEEEEE---
Confidence 4557889988 99999999999999999999999999987542110 00112356788999988
Q ss_pred cceeCCCccEEEEEeCCCCEEEEEcCCCe--eeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCcc
Q 022019 131 MSASDPTSCVFASTTRDHPIHLWDATTGL--LRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRD 207 (304)
Q Consensus 131 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~ 207 (304)
+|++++|++|+.|+.|++||+..+. ....+..|.. .|.+++|+|++++|+++ .|+.|++||++....
T Consensus 70 ----sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~-----~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~- 139 (345)
T 3fm0_A 70 ----SPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHEN-----EVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDE- 139 (345)
T ss_dssp ----CTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSS-----CEEEEEECTTSSEEEEEETTSCEEEEEECTTSC-
T ss_pred ----CCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCC-----CceEEEEeCCCCEEEEEECCCeEEEEECCCCCC-
Confidence 7799999999999999999998764 3445554443 89999999999999965 999999999976421
Q ss_pred ceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCce--EeEEeccccCCeEEEEECCCCcEEEEeec
Q 022019 208 FEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME--LLYVLHGQEGGVTHVQFSRDGNYLYTGGR 285 (304)
Q Consensus 208 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 285 (304)
... .....+|...|.+++|+| ++.+|++|+.|+.|++||.+.+. +...+.+|...|++++|+|+|++|++++
T Consensus 140 ~~~----~~~~~~h~~~v~~~~~~p-~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s- 213 (345)
T 3fm0_A 140 YEC----VSVLNSHTQDVKHVVWHP-SQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCS- 213 (345)
T ss_dssp EEE----EEEECCCCSCEEEEEECS-SSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEE-
T ss_pred eEE----EEEecCcCCCeEEEEECC-CCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEe-
Confidence 111 222367888899999999 77899999999999999998775 5578889999999999999999999999
Q ss_pred cCCeEEEEecc
Q 022019 286 KDPYILCWDLR 296 (304)
Q Consensus 286 ~d~~i~vwd~~ 296 (304)
.|++|++|+..
T Consensus 214 ~D~~v~iW~~~ 224 (345)
T 3fm0_A 214 DDRTVRIWRQY 224 (345)
T ss_dssp TTSCEEEEEEE
T ss_pred CCCeEEEeccc
Confidence 99999999974
No 14
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=3e-37 Score=251.05 Aligned_cols=224 Identities=18% Similarity=0.214 Sum_probs=172.0
Q ss_pred eeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEE
Q 022019 36 LIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLV 115 (304)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (304)
+.+|++.......... ....+|.+.|++++|+|++++|++|+.||+|++||+.++.... ..
T Consensus 117 v~lWd~~~~~~~~~~~--~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~-----------------~~ 177 (357)
T 4g56_B 117 VELWEILEKESLLVNK--FAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLK-----------------SY 177 (357)
T ss_dssp EEEC--------CCCC--EEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEE-----------------EE
T ss_pred EEEeeccccceeEEEe--eccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEE-----------------EE
Confidence 4566665554332211 2456899999999999999999999999999999998653321 23
Q ss_pred eecCCeEEEEeecCccceeCCCc-cEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCC-cEEEEE-c
Q 022019 116 VTEGESVYDFCWFPHMSASDPTS-CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTG-TKIFAG-Y 192 (304)
Q Consensus 116 ~~~~~~v~~~~~~~~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~-~~l~~~-~ 192 (304)
..|...|.+++| ++++ .++++++.||.|++||+++++....+.... +...+.+++|+|++ .+|++| .
T Consensus 178 ~~h~~~v~~v~~-------s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~---~~~~v~~v~~sp~~~~~la~g~~ 247 (357)
T 4g56_B 178 NAHSSEVNCVAA-------CPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCA---SDTIPTSVTWHPEKDDTFACGDE 247 (357)
T ss_dssp CCCSSCEEEEEE-------CTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTT---CCSCEEEEEECTTSTTEEEEEES
T ss_pred cCCCCCEEEEEE-------ccCCCceeeeeccCCceEEEECCCCceeeeeeecc---ccccccchhhhhcccceEEEeec
Confidence 346678999888 5555 478999999999999999887765554322 22378999999975 567765 9
Q ss_pred CCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEE
Q 022019 193 NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQ 272 (304)
Q Consensus 193 d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~ 272 (304)
|+.|++||++... . .....+|...|++++|+|+++.+|++|+.|+.|+|||+++++++..+ +|...|++++
T Consensus 248 d~~i~~wd~~~~~-~-------~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~va 318 (357)
T 4g56_B 248 TGNVSLVNIKNPD-S-------AQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVA 318 (357)
T ss_dssp SSCEEEEESSCGG-G-------CEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEE
T ss_pred ccceeEEECCCCc-E-------eEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEE
Confidence 9999999998632 1 11226678889999999977789999999999999999999887665 7999999999
Q ss_pred ECC-CCcEEEEeeccCCeEEEEecccc
Q 022019 273 FSR-DGNYLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 273 ~~~-~~~~l~~~~~~d~~i~vwd~~~~ 298 (304)
|+| ++.+|++++ .||+|++|++.+.
T Consensus 319 fsP~d~~~l~s~s-~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 319 WSPLDHSKFTTVG-WDHKVLHHHLPSE 344 (357)
T ss_dssp ECSSSTTEEEEEE-TTSCEEEEECC--
T ss_pred EeCCCCCEEEEEc-CCCeEEEEECCCC
Confidence 998 799999999 9999999999664
No 15
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.7e-36 Score=261.31 Aligned_cols=245 Identities=14% Similarity=0.216 Sum_probs=181.3
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCcc--cc-------ccccccc
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISY--DV-------NACSLAK 105 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~--~~-------~~~~~~~ 105 (304)
.+..|++...... ..+.+|.+.|++++|+|+|++||+|+.||+|+|||+.++.... .. ....+.+
T Consensus 40 ~v~l~~~~~~~~~------~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~ 113 (611)
T 1nr0_A 40 SVYTVPVGSLTDT------EIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDS 113 (611)
T ss_dssp EEEEEETTCSSCC------EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECT
T ss_pred EEEEecCCCcccC------eEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECC
Confidence 3456666544333 3678999999999999999999999999999999986543211 00 0111111
Q ss_pred cCCc--------------------cceEEEeecCCeEEEEeecCccceeCCCcc-EEEEEeCCCCEEEEEcCCCeeeEEe
Q 022019 106 DQDS--------------------YEASLVVTEGESVYDFCWFPHMSASDPTSC-VFASTTRDHPIHLWDATTGLLRCTY 164 (304)
Q Consensus 106 ~~~~--------------------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~ 164 (304)
+... ........|...|.+++| +|++. .|++|+.|++|++||..+++....+
T Consensus 114 dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f-------~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l 186 (611)
T 1nr0_A 114 ESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDF-------KPSRPFRIISGSDDNTVAIFEGPPFKFKSTF 186 (611)
T ss_dssp TSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEE-------CSSSSCEEEEEETTSCEEEEETTTBEEEEEE
T ss_pred CCCEEEEEECCCCceeEEEEeeCCCCcceecCCCCCceEEEE-------CCCCCeEEEEEeCCCeEEEEECCCCeEeeee
Confidence 1000 000112235556666666 66775 6999999999999999988888777
Q ss_pred ecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEec
Q 022019 165 RAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSY 243 (304)
Q Consensus 165 ~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~ 243 (304)
..|.. .|.+++|+|++++|+++ .|++|++||+..+.. ...+........+|...|.+++|+| ++.+|++++.
T Consensus 187 ~~H~~-----~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~-~~~~~~~~~~~~~h~~~V~~v~~sp-dg~~l~s~s~ 259 (611)
T 1nr0_A 187 GEHTK-----FVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTK-TGVFEDDSLKNVAHSGSVFGLTWSP-DGTKIASASA 259 (611)
T ss_dssp CCCSS-----CEEEEEECTTSSEEEEEETTSCEEEEETTTCCE-EEECBCTTSSSCSSSSCEEEEEECT-TSSEEEEEET
T ss_pred ccccC-----ceEEEEECCCCCEEEEEECCCcEEEEECCCCcE-eeeeccccccccccCCCEEEEEECC-CCCEEEEEeC
Confidence 76654 89999999999999965 999999999876421 1111000011127889999999999 7889999999
Q ss_pred CCeEEEEecCCceEeE-------------------------------------------EeccccCCeEEEEECCCCcEE
Q 022019 244 SQTSAIYREDNMELLY-------------------------------------------VLHGQEGGVTHVQFSRDGNYL 280 (304)
Q Consensus 244 dg~i~i~d~~~~~~~~-------------------------------------------~~~~~~~~v~~~~~~~~~~~l 280 (304)
|++|++||+++++++. .+.+|...|++++|+|+|++|
T Consensus 260 D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l 339 (611)
T 1nr0_A 260 DKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTL 339 (611)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred CCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEE
Confidence 9999999998776543 335788899999999999999
Q ss_pred EEeeccCCeEEEEeccccee
Q 022019 281 YTGGRKDPYILCWDLRKAVQ 300 (304)
Q Consensus 281 ~~~~~~d~~i~vwd~~~~~~ 300 (304)
++++ .|++|++||+.+++.
T Consensus 340 ~s~s-~D~~v~~Wd~~~~~~ 358 (611)
T 1nr0_A 340 FSAD-AEGHINSWDISTGIS 358 (611)
T ss_dssp EEEE-TTSCEEEEETTTCCE
T ss_pred EEEe-CCCcEEEEECCCCce
Confidence 9999 999999999988754
No 16
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=5.7e-36 Score=242.17 Aligned_cols=222 Identities=18% Similarity=0.358 Sum_probs=174.3
Q ss_pred eeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCcccc----c-------ccccc-------ccCC------
Q 022019 53 FRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDV----N-------ACSLA-------KDQD------ 108 (304)
Q Consensus 53 ~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~----~-------~~~~~-------~~~~------ 108 (304)
...+..|...|.+++|+|++++|++|+.|+.|++|++.+....... . ...+. ...+
T Consensus 90 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~w 169 (340)
T 1got_B 90 VHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALW 169 (340)
T ss_dssp EEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEE
T ss_pred ceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEE
Confidence 3467789999999999999999999999999999999765321100 0 00000 0000
Q ss_pred ----ccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCC
Q 022019 109 ----SYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPT 184 (304)
Q Consensus 109 ----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~ 184 (304)
.........|...|.+++| +|+++++++|+.||.|++||++++.....+..+.. .|.+++|+|+
T Consensus 170 d~~~~~~~~~~~~h~~~v~~~~~-------~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~-----~v~~v~~~p~ 237 (340)
T 1got_B 170 DIETGQQTTTFTGHTGDVMSLSL-------APDTRLFVSGACDASAKLWDVREGMCRQTFTGHES-----DINAICFFPN 237 (340)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEE-------CTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSS-----CEEEEEECTT
T ss_pred ECCCCcEEEEEcCCCCceEEEEE-------CCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcC-----CEEEEEEcCC
Confidence 1111122234556666655 78999999999999999999999988888876654 8999999999
Q ss_pred CcEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEecc
Q 022019 185 GTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHG 263 (304)
Q Consensus 185 ~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 263 (304)
+++|+++ .|+.|++||++... ...... ...+...|.+++|+| ++.+|++|+.||.|++||+.+++.+..+.+
T Consensus 238 ~~~l~s~s~d~~v~iwd~~~~~----~~~~~~--~~~~~~~v~~~~~s~-~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~ 310 (340)
T 1got_B 238 GNAFATGSDDATCRLFDLRADQ----ELMTYS--HDNIICGITSVSFSK-SGRLLLAGYDDFNCNVWDALKADRAGVLAG 310 (340)
T ss_dssp SSEEEEEETTSCEEEEETTTTE----EEEEEC--CTTCCSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEcCCCcEEEEECCCCc----EEEEEc--cCCcccceEEEEECC-CCCEEEEECCCCeEEEEEcccCcEeeEeec
Confidence 9999965 99999999998642 111111 123445699999999 788999999999999999999999999999
Q ss_pred ccCCeEEEEECCCCcEEEEeeccCCeEEEEe
Q 022019 264 QEGGVTHVQFSRDGNYLYTGGRKDPYILCWD 294 (304)
Q Consensus 264 ~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd 294 (304)
|...|.+++|+|+|.+|++|+ .|+.|++||
T Consensus 311 h~~~v~~~~~s~dg~~l~s~s-~D~~i~iWd 340 (340)
T 1got_B 311 HDNRVSCLGVTDDGMAVATGS-WDSFLKIWN 340 (340)
T ss_dssp CSSCEEEEEECTTSSCEEEEE-TTSCEEEEC
T ss_pred CCCcEEEEEEcCCCCEEEEEc-CCccEEecC
Confidence 999999999999999999999 999999997
No 17
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=5.5e-36 Score=243.42 Aligned_cols=207 Identities=20% Similarity=0.318 Sum_probs=175.0
Q ss_pred eeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccc
Q 022019 53 FRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMS 132 (304)
Q Consensus 53 ~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 132 (304)
...+.+|.+.|.+++|+|++..|++++.||+|++||+.+++.. .....|...|.++.|.|
T Consensus 147 ~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~-----------------~~~~~h~~~v~~~~~~~--- 206 (354)
T 2pbi_B 147 KKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLL-----------------QSFHGHGADVLCLDLAP--- 206 (354)
T ss_dssp CEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEE-----------------EEEECCSSCEEEEEECC---
T ss_pred ceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEE-----------------EEEcCCCCCeEEEEEEe---
Confidence 3466789999999999999999999999999999999865432 13345667888888854
Q ss_pred eeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceee
Q 022019 133 ASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKY 211 (304)
Q Consensus 133 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~ 211 (304)
++++++|++|+.||.|++||+++++....+..|.. .|.+++|+|++.+|+++ .|++|++||++... ..
T Consensus 207 --~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~-----~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~----~~ 275 (354)
T 2pbi_B 207 --SETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHES-----DVNSVRYYPSGDAFASGSDDATCRLYDLRADR----EV 275 (354)
T ss_dssp --CSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSS-----CEEEEEECTTSSEEEEEETTSCEEEEETTTTE----EE
T ss_pred --CCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCC-----CeEEEEEeCCCCEEEEEeCCCeEEEEECCCCc----EE
Confidence 45678999999999999999999998888876654 89999999999999965 99999999998631 11
Q ss_pred eeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEE
Q 022019 212 STLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYIL 291 (304)
Q Consensus 212 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~ 291 (304)
.... ...+...+.+++|+| ++.+|++|+.|+.|++||+.+++++..+.+|...|++++|+|+|++|++|+ .|++|+
T Consensus 276 ~~~~--~~~~~~~~~~~~~s~-~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs-~D~~v~ 351 (354)
T 2pbi_B 276 AIYS--KESIIFGASSVDFSL-SGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGS-WDHTLR 351 (354)
T ss_dssp EEEC--CTTCCSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEE-TTSEEE
T ss_pred EEEc--CCCcccceeEEEEeC-CCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEc-CCCCEE
Confidence 1111 122344688999999 788999999999999999999999999999999999999999999999999 999999
Q ss_pred EEe
Q 022019 292 CWD 294 (304)
Q Consensus 292 vwd 294 (304)
+|+
T Consensus 352 vW~ 354 (354)
T 2pbi_B 352 VWA 354 (354)
T ss_dssp EEC
T ss_pred ecC
Confidence 996
No 18
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1e-35 Score=237.88 Aligned_cols=212 Identities=23% Similarity=0.401 Sum_probs=180.8
Q ss_pred ceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCc
Q 022019 51 NQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPH 130 (304)
Q Consensus 51 ~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 130 (304)
.....+.+|.+.|++++|+|++++|++|+.||.|++|++.++... .....|...|.+++|
T Consensus 14 ~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~-----------------~~~~~h~~~v~~~~~--- 73 (312)
T 4ery_A 14 ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-----------------KTISGHKLGISDVAW--- 73 (312)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE-----------------EEECCCSSCEEEEEE---
T ss_pred eeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccc-----------------hhhccCCCceEEEEE---
Confidence 334478899999999999999999999999999999998755332 133456678999888
Q ss_pred cceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccce
Q 022019 131 MSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFE 209 (304)
Q Consensus 131 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~ 209 (304)
+|++++|++++.|+.|++||+.+++....+..+.. .|.++.|+|++++++++ .|+.|++||++...
T Consensus 74 ----~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~---- 140 (312)
T 4ery_A 74 ----SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSN-----YVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK---- 140 (312)
T ss_dssp ----CTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSS-----CEEEEEECSSSSEEEEEETTSCEEEEETTTCC----
T ss_pred ----cCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCC-----CEEEEEEcCCCCEEEEEeCCCcEEEEECCCCE----
Confidence 77899999999999999999999998888876654 89999999999999965 99999999998642
Q ss_pred eeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEec-cccCCeEEEEECCCCcEEEEeeccCC
Q 022019 210 KYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH-GQEGGVTHVQFSRDGNYLYTGGRKDP 288 (304)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~d~ 288 (304)
... ....|..+|.+++|+| ++.+|++|+.||.|++||+++++.+..+. .+...+..++|+|++++|++++ .|+
T Consensus 141 ~~~----~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~d~ 214 (312)
T 4ery_A 141 CLK----TLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT-LDN 214 (312)
T ss_dssp EEE----EECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEE-TTT
T ss_pred EEE----EecCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEc-CCC
Confidence 111 2256778899999999 77899999999999999999998877764 4566899999999999999999 999
Q ss_pred eEEEEecccceee
Q 022019 289 YILCWDLRKAVQV 301 (304)
Q Consensus 289 ~i~vwd~~~~~~~ 301 (304)
.|++||+++++.+
T Consensus 215 ~i~iwd~~~~~~~ 227 (312)
T 4ery_A 215 TLKLWDYSKGKCL 227 (312)
T ss_dssp EEEEEETTTTEEE
T ss_pred eEEEEECCCCcEE
Confidence 9999999988754
No 19
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=8.8e-36 Score=241.36 Aligned_cols=217 Identities=22% Similarity=0.395 Sum_probs=177.7
Q ss_pred ceeeeecCCCCceeEEEE-----cC-CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEE
Q 022019 51 NQFRTSSIPNNFLKGIKW-----SP-DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYD 124 (304)
Q Consensus 51 ~~~~~~~~h~~~V~~i~~-----s~-~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 124 (304)
.....+.+|.+.|++++| ++ ++.+|+||+.|++|++||+.+...... ..........|...|.+
T Consensus 12 ~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~----------~~~~~~~l~~h~~~V~~ 81 (343)
T 2xzm_R 12 VKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGY----------FGIPHKALTGHNHFVSD 81 (343)
T ss_dssp EEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSB----------SEEEEEEECCCSSCEEE
T ss_pred eeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccc----------cccccchhccCCCceEE
Confidence 345578899999999999 77 899999999999999999875432110 01112244567788999
Q ss_pred EeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCC
Q 022019 125 FCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHR 203 (304)
Q Consensus 125 ~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~ 203 (304)
++| +|++.++++++.|++|++||+++++....+..|.. .|.+++|+|++++|+++ .|+.|++||+..
T Consensus 82 ~~~-------~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~-----~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~ 149 (343)
T 2xzm_R 82 LAL-------SQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQS-----EVYSVAFSPDNRQILSAGAEREIKLWNILG 149 (343)
T ss_dssp EEE-------CSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCS-----CEEEEEECSSTTEEEEEETTSCEEEEESSS
T ss_pred EEE-------CCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCC-----cEEEEEECCCCCEEEEEcCCCEEEEEeccC
Confidence 988 77899999999999999999999998888876655 89999999999999955 999999999973
Q ss_pred CCccceeeeeeeccccccccceeEEEeecCC---------CcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEEC
Q 022019 204 PGRDFEKYSTLKGNKEGQAGIMSAIAFSPTH---------TGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFS 274 (304)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~---------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~ 274 (304)
. . ........+|...+.+++|+|+. +.++++++.||.|++||. .......+.+|...|.+++|+
T Consensus 150 ~-----~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s 222 (343)
T 2xzm_R 150 E-----C-KFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSIS 222 (343)
T ss_dssp C-----E-EEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEEC
T ss_pred C-----c-eeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEEC
Confidence 1 1 11112224678889999999943 268999999999999994 567778889999999999999
Q ss_pred CCCcEEEEeeccCCeEEEEeccc
Q 022019 275 RDGNYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 275 ~~~~~l~~~~~~d~~i~vwd~~~ 297 (304)
|+|++|++++ .||.|++||+.+
T Consensus 223 ~~g~~l~sgs-~dg~v~iwd~~~ 244 (343)
T 2xzm_R 223 PNGKYIATGG-KDKKLLIWDILN 244 (343)
T ss_dssp TTSSEEEEEE-TTCEEEEEESSC
T ss_pred CCCCEEEEEc-CCCeEEEEECCC
Confidence 9999999999 999999999954
No 20
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=8e-36 Score=236.79 Aligned_cols=212 Identities=17% Similarity=0.261 Sum_probs=170.5
Q ss_pred eecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
.+.+|.+.|++++|+|+|++||+|+.|++|+|||+..... ........|...|.+++|.|.
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~---------------~~~~~l~gH~~~V~~v~~s~~---- 64 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETH---------------KLIDTLTGHEGPVWRVDWAHP---- 64 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCB---------------CCCEEECCCSSCEEEEEECCG----
T ss_pred eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCc---------------EEEEEEccccCCeEEEEecCC----
Confidence 5779999999999999999999999999999999864211 112244567889999998431
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCCe--eeEEeecccccccccceEEEEECCC--CcEEEEE-cCCeEEEEEcCCCCccce
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTGL--LRCTYRAYDAVDEITAAFSVAFNPT--GTKIFAG-YNKSVRVFDVHRPGRDFE 209 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~~~~~~v~~i~~~~~--~~~l~~~-~d~~i~v~d~~~~~~~~~ 209 (304)
.++++|++|+.|++|++||+++++ ....+..+. ..|.+++|+|+ +.+|+++ .|+.|++||++......
T Consensus 65 -~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~-----~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~- 137 (297)
T 2pm7_B 65 -KFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHS-----ASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTS- 137 (297)
T ss_dssp -GGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCS-----SCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBC-
T ss_pred -CcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCC-----CceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCcee-
Confidence 147899999999999999998774 333444343 38999999997 7888855 99999999998642111
Q ss_pred eeeeeeccccccccceeEEEeecCC------------CcEEEEEecCCeEEEEecCCce----EeEEeccccCCeEEEEE
Q 022019 210 KYSTLKGNKEGQAGIMSAIAFSPTH------------TGMLAIGSYSQTSAIYREDNME----LLYVLHGQEGGVTHVQF 273 (304)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~~~~~p~~------------~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~v~~~~~ 273 (304)
.....+|...|.+++|+|+. +.+|++|+.|+.|++||++++. +...+.+|...|.+++|
T Consensus 138 -----~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~ 212 (297)
T 2pm7_B 138 -----PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAW 212 (297)
T ss_dssp -----CEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEE
T ss_pred -----eeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEE
Confidence 11125688889999999942 4689999999999999998754 66788999999999999
Q ss_pred CCCC---cEEEEeeccCCeEEEEecccc
Q 022019 274 SRDG---NYLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 274 ~~~~---~~l~~~~~~d~~i~vwd~~~~ 298 (304)
+|++ .+|++++ .|++|++||++++
T Consensus 213 sp~~~~~~~las~s-~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 213 SPTVLLRSYMASVS-QDRTCIIWTQDNE 239 (297)
T ss_dssp CCCCSSSEEEEEEE-TTSCEEEEEESST
T ss_pred CCCCCCceEEEEEE-CCCcEEEEEeCCC
Confidence 9995 8999999 9999999999764
No 21
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=3.8e-36 Score=244.57 Aligned_cols=235 Identities=13% Similarity=0.188 Sum_probs=179.2
Q ss_pred cCcc--eeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCc
Q 022019 32 YTWP--LIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDS 109 (304)
Q Consensus 32 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~ 109 (304)
+.|. +..|+.+...... .......+|...|++++|+|++. +++++.||+|+|||+.+++.....
T Consensus 66 ~~wd~~v~~~~~~~~~~~~--~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~----------- 131 (357)
T 4g56_B 66 RTWGGSIWVFKDPEGAPNE--SLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVN----------- 131 (357)
T ss_dssp SSCCEEEEEESSCC---CG--GGCSEEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCC-----------
T ss_pred ccccCeEEEEECCCCCcce--eEecccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEE-----------
Confidence 5564 4556655443322 12224567999999999999985 556788999999999865432111
Q ss_pred cceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCc-EE
Q 022019 110 YEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGT-KI 188 (304)
Q Consensus 110 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l 188 (304)
......|...|.+++| +|++++|++|+.|+.|++||+++++....+..+.. .|.+++|+|++. ++
T Consensus 132 --~~~~~~h~~~V~~v~~-------spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~-----~v~~v~~s~~~~~~~ 197 (357)
T 4g56_B 132 --KFAKYEHDDIVKTLSV-------FSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSS-----EVNCVAACPGKDTIF 197 (357)
T ss_dssp --CEEECCCSSCEEEEEE-------CSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSS-----CEEEEEECTTCSSCE
T ss_pred --eeccCCCCCCEEEEEE-------CCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCC-----CEEEEEEccCCCcee
Confidence 1123356788999988 77999999999999999999999999888877665 899999999875 55
Q ss_pred E-EEcCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCC
Q 022019 189 F-AGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGG 267 (304)
Q Consensus 189 ~-~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 267 (304)
+ ++.|+.|++||++.+.... ......+...+.+++|+|+++.+|++|+.|+.|++||+++++++..+.+|...
T Consensus 198 ~s~~~dg~v~~wd~~~~~~~~------~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~ 271 (357)
T 4g56_B 198 LSCGEDGRILLWDTRKPKPAT------RIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQN 271 (357)
T ss_dssp EEEETTSCEEECCTTSSSCBC------BCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSC
T ss_pred eeeccCCceEEEECCCCceee------eeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEecccee
Confidence 5 4599999999998742211 11124456779999999977889999999999999999999999999999999
Q ss_pred eEEEEECCCC-cEEEEeeccCCeEEEEecccceee
Q 022019 268 VTHVQFSRDG-NYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 268 v~~~~~~~~~-~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
|++++|+|++ ++|++++ .|++|+|||+++++.+
T Consensus 272 v~~l~~sp~~~~~lasgs-~D~~i~iwd~~~~~~~ 305 (357)
T 4g56_B 272 ITGLAYSYHSSPFLASIS-EDCTVAVLDADFSEVF 305 (357)
T ss_dssp EEEEEECSSSSCCEEEEE-TTSCEEEECTTSCEEE
T ss_pred EEEEEEcCCCCCEEEEEe-CCCEEEEEECCCCcEe
Confidence 9999999997 5788999 9999999999998764
No 22
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-35 Score=238.41 Aligned_cols=212 Identities=19% Similarity=0.355 Sum_probs=169.4
Q ss_pred eeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEE-ee-cCCeEEEEeecC
Q 022019 52 QFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLV-VT-EGESVYDFCWFP 129 (304)
Q Consensus 52 ~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~v~~~~~~~ 129 (304)
.+..+.+|.+.|++++|+|+ +|++|+.|++|++||+..+... ..... .. |...|.+++|
T Consensus 6 ~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~---------------~~~~~~~~~h~~~v~~v~~-- 66 (330)
T 2hes_X 6 LIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFT---------------LIDVLDETAHKKAIRSVAW-- 66 (330)
T ss_dssp EEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCE---------------EEEEECTTCCCSCEEEEEE--
T ss_pred cceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeE---------------EEEEEecCCccCCEEEEEE--
Confidence 45578899999999999987 9999999999999999753210 00111 22 6788999988
Q ss_pred ccceeCCCccEEEEEeCCCCEEEEEcCC-------CeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEc
Q 022019 130 HMSASDPTSCVFASTTRDHPIHLWDATT-------GLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDV 201 (304)
Q Consensus 130 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~-------~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~ 201 (304)
+|++++|++|+.|++|++||+.. .+....+..|. ..|.+++|+|++++|+++ .|+.|++||+
T Consensus 67 -----sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~-----~~V~~v~~sp~g~~las~s~D~~v~iwd~ 136 (330)
T 2hes_X 67 -----RPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHE-----NEVKGVAWSNDGYYLATCSRDKSVWIWET 136 (330)
T ss_dssp -----CTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC---------CEEEEEECTTSCEEEEEETTSCEEEEEC
T ss_pred -----CCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCC-----CcEEEEEECCCCCEEEEEeCCCEEEEEec
Confidence 77899999999999999999853 23344454444 389999999999999965 9999999999
Q ss_pred CCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCc--eEeEEeccccCCeEEEEECCC--C
Q 022019 202 HRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM--ELLYVLHGQEGGVTHVQFSRD--G 277 (304)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~v~~~~~~~~--~ 277 (304)
+..+........ ..+|...|.+++|+| ++.+|++|+.|+.|++||...+ +++..+.+|...|.+++|+|+ +
T Consensus 137 ~~~~~~~~~~~~----~~~h~~~v~~v~~~p-~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 211 (330)
T 2hes_X 137 DESGEEYECISV----LQEHSQDVKHVIWHP-SEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGV 211 (330)
T ss_dssp CTTCCCCEEEEE----ECCCSSCEEEEEECS-SSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSS
T ss_pred cCCCCCeEEEEE----eccCCCceEEEEECC-CCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCe
Confidence 653332222222 367888999999999 7789999999999999998765 678899999999999999999 7
Q ss_pred cEEEEeeccCCeEEEEecccc
Q 022019 278 NYLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 278 ~~l~~~~~~d~~i~vwd~~~~ 298 (304)
.+|++++ .|++|++||++.+
T Consensus 212 ~~l~s~s-~D~~v~iw~~~~~ 231 (330)
T 2hes_X 212 FRLCSGS-DDSTVRVWKYMGD 231 (330)
T ss_dssp CEEEEEE-TTSCEEEEEEEEE
T ss_pred eEEEEEe-CCCeEEEEEecCC
Confidence 7899999 9999999999764
No 23
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=8.8e-36 Score=238.90 Aligned_cols=232 Identities=20% Similarity=0.311 Sum_probs=176.1
Q ss_pred hcHHhhccccccCcceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCcccccc
Q 022019 21 VTEAAQENQQEYTWPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNA 100 (304)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~ 100 (304)
+..+++.+...+.|....-+. .....++.+.+|...|.+++|+|++++|++|+.|++|++||+.+++..
T Consensus 32 ~l~s~s~D~~v~~W~~~~~~~------~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~----- 100 (319)
T 3frx_A 32 LLLSASRDKTLISWKLTGDDQ------KFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETY----- 100 (319)
T ss_dssp EEEEEETTSEEEEEEEEEETT------EEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE-----
T ss_pred EEEEecCCccEEEecCCCCCc------cccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCee-----
Confidence 444556666666664322111 111334578899999999999999999999999999999999865321
Q ss_pred ccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEE
Q 022019 101 CSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVA 180 (304)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~ 180 (304)
.....|...|.+++| +|++.+|++|+.|++|++||++. .....+..+.. .|.++.
T Consensus 101 ------------~~~~~h~~~v~~~~~-------~~~~~~l~s~s~D~~i~vwd~~~-~~~~~~~~h~~-----~v~~~~ 155 (319)
T 3frx_A 101 ------------QRFVGHKSDVMSVDI-------DKKASMIISGSRDKTIKVWTIKG-QCLATLLGHND-----WVSQVR 155 (319)
T ss_dssp ------------EEEECCSSCEEEEEE-------CTTSCEEEEEETTSCEEEEETTS-CEEEEECCCSS-----CEEEEE
T ss_pred ------------EEEccCCCcEEEEEE-------cCCCCEEEEEeCCCeEEEEECCC-CeEEEEeccCC-----cEEEEE
Confidence 234457788999988 77899999999999999999974 45555555443 899999
Q ss_pred ECCCC------cEEEE-EcCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecC
Q 022019 181 FNPTG------TKIFA-GYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED 253 (304)
Q Consensus 181 ~~~~~------~~l~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~ 253 (304)
|+|.+ ..+++ +.|+.|++||++.. .......+|...|.+++|+| ++.+|++|+.||.|++||++
T Consensus 156 ~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~--------~~~~~~~~h~~~v~~~~~sp-~g~~l~s~~~dg~i~iwd~~ 226 (319)
T 3frx_A 156 VVPNEKADDDSVTIISAGNDKMVKAWNLNQF--------QIEADFIGHNSNINTLTASP-DGTLIASAGKDGEIMLWNLA 226 (319)
T ss_dssp ECCC------CCEEEEEETTSCEEEEETTTT--------EEEEEECCCCSCEEEEEECT-TSSEEEEEETTCEEEEEETT
T ss_pred EccCCCCCCCccEEEEEeCCCEEEEEECCcc--------hhheeecCCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECC
Confidence 99854 36775 59999999999763 12222367889999999999 78899999999999999998
Q ss_pred CceEeEEecc------------------------------------------------ccCCeEEEEECCCCcEEEEeec
Q 022019 254 NMELLYVLHG------------------------------------------------QEGGVTHVQFSRDGNYLYTGGR 285 (304)
Q Consensus 254 ~~~~~~~~~~------------------------------------------------~~~~v~~~~~~~~~~~l~~~~~ 285 (304)
+++++..+.. |...+.+++|+|||++|++|+
T Consensus 227 ~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~- 305 (319)
T 3frx_A 227 AKKAMYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGY- 305 (319)
T ss_dssp TTEEEEEEECCSCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEE-
T ss_pred CCcEEEEecCCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEee-
Confidence 7765544321 233577888888999898888
Q ss_pred cCCeEEEEecccc
Q 022019 286 KDPYILCWDLRKA 298 (304)
Q Consensus 286 ~d~~i~vwd~~~~ 298 (304)
.||.|++||+.++
T Consensus 306 ~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 306 TDNVIRVWQVMTA 318 (319)
T ss_dssp TTSCEEEEEEEEC
T ss_pred cCceEEEEEEeec
Confidence 8999999988765
No 24
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=5.1e-35 Score=236.80 Aligned_cols=223 Identities=19% Similarity=0.333 Sum_probs=176.4
Q ss_pred eecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
.+.+|.+.|++++|+|++++|++|+.||.|++||+.++.... ........|...|.+++|.|.
T Consensus 6 ~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~-------------~~~~~~~~~~~~v~~~~~~~~---- 68 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNW-------------ELSDSWRAHDSSIVAIDWASP---- 68 (351)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCE-------------EEEEEEECCSSCEEEEEECCG----
T ss_pred cCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcc-------------eecceeccCCCcEEEEEEcCC----
Confidence 567999999999999999999999999999999998543211 112233457789999998431
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCC---------eeeEEeecccccccccceEEEEECCC--CcEEEEE-cCCeEEEEEcC
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTG---------LLRCTYRAYDAVDEITAAFSVAFNPT--GTKIFAG-YNKSVRVFDVH 202 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~---------~~~~~~~~~~~~~~~~~v~~i~~~~~--~~~l~~~-~d~~i~v~d~~ 202 (304)
.++++|++++.||.|++||++++ +....+..+.. .|.+++|+|+ +.+++++ .|+.|++||++
T Consensus 69 -~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~ 142 (351)
T 3f3f_A 69 -EYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKG-----SLYSVKFAPAHLGLKLACLGNDGILRLYDAL 142 (351)
T ss_dssp -GGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSS-----CEEEEEECCGGGCSEEEEEETTCEEEEEECS
T ss_pred -CCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCC-----ceeEEEEcCCCCCcEEEEecCCCcEEEecCC
Confidence 15889999999999999999886 33455554443 8999999999 9988865 99999999997
Q ss_pred CCCccceee----------------------------------------------------eeeeccccccccceeEEEe
Q 022019 203 RPGRDFEKY----------------------------------------------------STLKGNKEGQAGIMSAIAF 230 (304)
Q Consensus 203 ~~~~~~~~~----------------------------------------------------~~~~~~~~~~~~~v~~~~~ 230 (304)
......... ........+|...|.+++|
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~ 222 (351)
T 3f3f_A 143 EPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISW 222 (351)
T ss_dssp STTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEE
T ss_pred ChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEE
Confidence 643211000 0012234568889999999
Q ss_pred ecCCC---cEEEEEecCCeEEEEecCCc----------------------------------------------eEeEEe
Q 022019 231 SPTHT---GMLAIGSYSQTSAIYREDNM----------------------------------------------ELLYVL 261 (304)
Q Consensus 231 ~p~~~---~~l~~~~~dg~i~i~d~~~~----------------------------------------------~~~~~~ 261 (304)
+|+++ .+|++|+.||.|++||++.+ +++..+
T Consensus 223 ~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (351)
T 3f3f_A 223 APSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEH 302 (351)
T ss_dssp CCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEE
T ss_pred CCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEE
Confidence 99432 79999999999999999864 677788
Q ss_pred ccccCCeEEEEECCCCcEEEEeeccCCeEEEEecccceee
Q 022019 262 HGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 262 ~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
.+|...|++++|+|++++|++++ .||.|++|++.+++.+
T Consensus 303 ~~h~~~v~~~~~s~~~~~l~s~~-~dg~v~iw~~~~~~~~ 341 (351)
T 3f3f_A 303 DDHNGEVWSVSWNLTGTILSSAG-DDGKVRLWKATYSNEF 341 (351)
T ss_dssp CTTSSCEEEEEECSSSCCEEEEE-TTSCEEEEEECTTSCE
T ss_pred ecccccEEEEEEcCCCCEEEEec-CCCcEEEEecCcCcch
Confidence 89999999999999999999999 9999999999987543
No 25
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=4.4e-35 Score=241.52 Aligned_cols=232 Identities=19% Similarity=0.338 Sum_probs=180.0
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEE
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (304)
.+..|++..... ...+.+|...|++++|+|++.+|++++.|++|++||+.++... .
T Consensus 146 ~i~iwd~~~~~~------~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~------------------~ 201 (393)
T 1erj_A 146 LIRIWDIENRKI------VMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCS------------------L 201 (393)
T ss_dssp CEEEEETTTTEE------EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE------------------E
T ss_pred eEEEEECCCCcE------EEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeE------------------E
Confidence 455666655433 3477899999999999999999999999999999999865321 2
Q ss_pred EeecCCeEEEEeecCccceeCC-CccEEEEEeCCCCEEEEEcCCCeeeEEeeccc--ccccccceEEEEECCCCcEEEEE
Q 022019 115 VVTEGESVYDFCWFPHMSASDP-TSCVFASTTRDHPIHLWDATTGLLRCTYRAYD--AVDEITAAFSVAFNPTGTKIFAG 191 (304)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--~~~~~~~v~~i~~~~~~~~l~~~ 191 (304)
...+...+..++| +| ++++|++|+.||.|++||+++++....+.... ...|...|.+++|+|++++|+++
T Consensus 202 ~~~~~~~v~~~~~-------~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~ 274 (393)
T 1erj_A 202 TLSIEDGVTTVAV-------SPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSG 274 (393)
T ss_dssp EEECSSCEEEEEE-------CSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEE
T ss_pred EEEcCCCcEEEEE-------ECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEE
Confidence 2334466777777 55 78999999999999999999988776653221 12345589999999999999965
Q ss_pred -cCCeEEEEEcCCCCcccee----eeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccC
Q 022019 192 -YNKSVRVFDVHRPGRDFEK----YSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEG 266 (304)
Q Consensus 192 -~d~~i~v~d~~~~~~~~~~----~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 266 (304)
.|+.|++||++........ .........+|...|.+++|+| ++.+|++|+.|+.|++||+++++++..+.+|..
T Consensus 275 s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~ 353 (393)
T 1erj_A 275 SLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQ-NDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRN 353 (393)
T ss_dssp ETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECG-GGCEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred eCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECC-CCCEEEEEeCCCeEEEEECCCCeEEEEECCCCC
Confidence 9999999999763221100 0111122357888899999999 778999999999999999999999999999999
Q ss_pred CeEEEEECC------CCcEEEEeeccCCeEEEEecccce
Q 022019 267 GVTHVQFSR------DGNYLYTGGRKDPYILCWDLRKAV 299 (304)
Q Consensus 267 ~v~~~~~~~------~~~~l~~~~~~d~~i~vwd~~~~~ 299 (304)
.|.+++|++ ++.+|++|+ .||+|++|++.+.+
T Consensus 354 ~v~~v~~~~~~~~~p~~~~l~sgs-~Dg~i~iW~~~~~~ 391 (393)
T 1erj_A 354 SVISVAVANGSSLGPEYNVFATGS-GDCKARIWKYKKIA 391 (393)
T ss_dssp CEEEEEECSSCTTCTTCEEEEEEE-TTSEEEEEEEEEC-
T ss_pred CEEEEEecCCcCcCCCCCEEEEEC-CCCcEEECcccccC
Confidence 999999876 688999999 99999999997643
No 26
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.2e-34 Score=238.85 Aligned_cols=208 Identities=23% Similarity=0.419 Sum_probs=168.7
Q ss_pred CceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccE
Q 022019 61 NFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCV 140 (304)
Q Consensus 61 ~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 140 (304)
..|++++|+|+|++|++|+.||.|++||+.+++. ......|...|.+++| +|++.+
T Consensus 124 ~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~-----------------~~~~~~h~~~v~~~~~-------~p~~~~ 179 (393)
T 1erj_A 124 LYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKI-----------------VMILQGHEQDIYSLDY-------FPSGDK 179 (393)
T ss_dssp CBEEEEEECTTSSEEEEEETTSCEEEEETTTTEE-----------------EEEECCCSSCEEEEEE-------CTTSSE
T ss_pred eeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcE-----------------EEEEccCCCCEEEEEE-------cCCCCE
Confidence 3599999999999999999999999999975432 1234456788999988 778999
Q ss_pred EEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECC-CCcEEEEE-cCCeEEEEEcCCCCccceeeeeeeccc
Q 022019 141 FASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNP-TGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNK 218 (304)
Q Consensus 141 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~ 218 (304)
|++++.|++|++||+++++....+.... .+.+++|+| ++++++++ .|+.|++||+++.. ....+.......
T Consensus 180 l~s~s~d~~v~iwd~~~~~~~~~~~~~~------~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~-~~~~~~~~~~~~ 252 (393)
T 1erj_A 180 LVSGSGDRTVRIWDLRTGQCSLTLSIED------GVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGF-LVERLDSENESG 252 (393)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECSS------CEEEEEECSTTCCEEEEEETTSCEEEEETTTCC-EEEEEC------
T ss_pred EEEecCCCcEEEEECCCCeeEEEEEcCC------CcEEEEEECCCCCEEEEEcCCCcEEEEECCCCc-EEEeecccccCC
Confidence 9999999999999999998877665433 789999999 88999965 99999999998642 211111111222
Q ss_pred cccccceeEEEeecCCCcEEEEEecCCeEEEEecCCc------------eEeEEeccccCCeEEEEECCCCcEEEEeecc
Q 022019 219 EGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM------------ELLYVLHGQEGGVTHVQFSRDGNYLYTGGRK 286 (304)
Q Consensus 219 ~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~ 286 (304)
.+|...|.+++|+| ++.+|++|+.||.|++||+++. .+...+.+|...|.+++|+|++.+|++++ .
T Consensus 253 ~~h~~~v~~v~~~~-~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs-~ 330 (393)
T 1erj_A 253 TGHKDSVYSVVFTR-DGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGS-K 330 (393)
T ss_dssp CCCSSCEEEEEECT-TSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEE-T
T ss_pred CCCCCCEEEEEECC-CCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEe-C
Confidence 56888999999999 7789999999999999998753 34567788999999999999999999999 9
Q ss_pred CCeEEEEecccceee
Q 022019 287 DPYILCWDLRKAVQV 301 (304)
Q Consensus 287 d~~i~vwd~~~~~~~ 301 (304)
|+.|++||+++++.+
T Consensus 331 D~~v~iwd~~~~~~~ 345 (393)
T 1erj_A 331 DRGVLFWDKKSGNPL 345 (393)
T ss_dssp TSEEEEEETTTCCEE
T ss_pred CCeEEEEECCCCeEE
Confidence 999999999988765
No 27
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=5.3e-36 Score=250.26 Aligned_cols=217 Identities=15% Similarity=0.134 Sum_probs=172.5
Q ss_pred ceeeeecCCCCceeEEEEcC-CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecC
Q 022019 51 NQFRTSSIPNNFLKGIKWSP-DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFP 129 (304)
Q Consensus 51 ~~~~~~~~h~~~V~~i~~s~-~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 129 (304)
.......+|...|+||+|+| ++++||+|+.||+|+|||+.++.... ......|...|.+++|+|
T Consensus 110 ~~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~---------------~~~~~gH~~~V~~l~f~p 174 (435)
T 4e54_B 110 RILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPT---------------FIKGIGAGGSITGLKFNP 174 (435)
T ss_dssp TSCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCE---------------EECCCSSSCCCCEEEECS
T ss_pred eecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCcee---------------EEEccCCCCCEEEEEEeC
Confidence 34446678999999999999 67799999999999999997553211 111235778899999844
Q ss_pred ccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccc
Q 022019 130 HMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDF 208 (304)
Q Consensus 130 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~ 208 (304)
. ++++|++|+.||+|++||++++........+. ....+.+++|+|++.+|++| .||.|++||++.. .
T Consensus 175 ~------~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~--~- 242 (435)
T 4e54_B 175 L------NTNQFYASSMEGTTRLQDFKGNILRVFASSDT---INIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK--E- 242 (435)
T ss_dssp S------CTTEEEEECSSSCEEEEETTSCEEEEEECCSS---CSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC--B-
T ss_pred C------CCCEEEEEeCCCEEEEeeccCCceeEEeccCC---CCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc--e-
Confidence 3 67899999999999999998765443332221 22367899999999999976 9999999998642 1
Q ss_pred eeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEE---eccccCCeEEEEECCCCcEEEEeec
Q 022019 209 EKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYV---LHGQEGGVTHVQFSRDGNYLYTGGR 285 (304)
Q Consensus 209 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~ 285 (304)
.....+|...|.+++|+|++..++++|+.|+.|+|||+++.+.... ..+|...|++++|+|+|.+|++++
T Consensus 243 ------~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~- 315 (435)
T 4e54_B 243 ------LWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTD- 315 (435)
T ss_dssp ------CCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEE-
T ss_pred ------eEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEc-
Confidence 1223678889999999997777999999999999999988764433 357899999999999999999999
Q ss_pred cCCeEEEEecccceee
Q 022019 286 KDPYILCWDLRKAVQV 301 (304)
Q Consensus 286 ~d~~i~vwd~~~~~~~ 301 (304)
.||.|++||+++++.+
T Consensus 316 ~D~~i~iwd~~~~~~~ 331 (435)
T 4e54_B 316 QKSEIRVYSASQWDCP 331 (435)
T ss_dssp SSSCEEEEESSSSSSE
T ss_pred CCCEEEEEECCCCccc
Confidence 9999999999987644
No 28
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=9.7e-35 Score=256.12 Aligned_cols=220 Identities=22% Similarity=0.364 Sum_probs=185.0
Q ss_pred eeeecCCCCceeEEEEcCC-CCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcc
Q 022019 53 FRTSSIPNNFLKGIKWSPD-GSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHM 131 (304)
Q Consensus 53 ~~~~~~h~~~V~~i~~s~~-~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 131 (304)
...+.+|.+.|++++|+|+ +++|+||+.||+|++|++.+..... .........|...|.+++|
T Consensus 375 ~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~------------~~~~~~~~~h~~~v~~v~~---- 438 (694)
T 3dm0_A 375 KGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAY------------GVAQRRLTGHSHFVEDVVL---- 438 (694)
T ss_dssp EEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCS------------CEEEEEEECCSSCEEEEEE----
T ss_pred hhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCccc------------ccccceecCCCCcEEEEEE----
Confidence 3468899999999999986 4799999999999999997543211 1112345567889999988
Q ss_pred ceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCcccee
Q 022019 132 SASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEK 210 (304)
Q Consensus 132 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~ 210 (304)
+|++++|++|+.||+|++||+.++.....+..|.. .|.+++|+|++++|+++ .|++|++||+... .
T Consensus 439 ---s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~-----~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~-----~ 505 (694)
T 3dm0_A 439 ---SSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTK-----DVLSVAFSLDNRQIVSASRDRTIKLWNTLGE-----C 505 (694)
T ss_dssp ---CTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSS-----CEEEEEECTTSSCEEEEETTSCEEEECTTSC-----E
T ss_pred ---CCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCC-----CEEEEEEeCCCCEEEEEeCCCEEEEEECCCC-----c
Confidence 77999999999999999999999998888876665 89999999999999965 9999999998642 1
Q ss_pred eeeeeccccccccceeEEEeecCC-CcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCe
Q 022019 211 YSTLKGNKEGQAGIMSAIAFSPTH-TGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPY 289 (304)
Q Consensus 211 ~~~~~~~~~~~~~~v~~~~~~p~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~ 289 (304)
...+.....+|...|.+++|+|++ ...+++|+.|+.|++||++++++...+.+|.+.|++++|+|+|++|++++ .||.
T Consensus 506 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~-~Dg~ 584 (694)
T 3dm0_A 506 KYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGG-KDGV 584 (694)
T ss_dssp EEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE-TTSB
T ss_pred ceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEe-CCCe
Confidence 123333346788889999999954 25899999999999999999999999999999999999999999999999 9999
Q ss_pred EEEEecccceeee
Q 022019 290 ILCWDLRKAVQVV 302 (304)
Q Consensus 290 i~vwd~~~~~~~~ 302 (304)
|++||+++++++.
T Consensus 585 i~iwd~~~~~~~~ 597 (694)
T 3dm0_A 585 VLLWDLAEGKKLY 597 (694)
T ss_dssp CEEEETTTTEEEE
T ss_pred EEEEECCCCceEE
Confidence 9999999987653
No 29
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=3e-34 Score=227.76 Aligned_cols=214 Identities=18% Similarity=0.258 Sum_probs=166.0
Q ss_pred eeeecCCCCceeEEEEcC--CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCc
Q 022019 53 FRTSSIPNNFLKGIKWSP--DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPH 130 (304)
Q Consensus 53 ~~~~~~h~~~V~~i~~s~--~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 130 (304)
+..+.+|.+.|++++|+| ++++|++|+.||+|++||+.++... .......|...|.+++|.|.
T Consensus 46 ~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~---------------~~~~~~~h~~~v~~v~~~p~ 110 (297)
T 2pm7_B 46 IDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWS---------------QIAVHAVHSASVNSVQWAPH 110 (297)
T ss_dssp CEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBC---------------CCEEECCCSSCEEEEEECCG
T ss_pred EEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceE---------------EEEEeecCCCceeEEEeCcC
Confidence 447889999999999986 4899999999999999999754211 11123346678999998442
Q ss_pred cceeCCCccEEEEEeCCCCEEEEEcCCCee--eEEeecccccccccceEEEEECCC-------------CcEEEEE-cCC
Q 022019 131 MSASDPTSCVFASTTRDHPIHLWDATTGLL--RCTYRAYDAVDEITAAFSVAFNPT-------------GTKIFAG-YNK 194 (304)
Q Consensus 131 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~~~~~v~~i~~~~~-------------~~~l~~~-~d~ 194 (304)
..+.+|++++.|+.|++||++++.. ...+..+. ..|.+++|+|+ +++|++| .|+
T Consensus 111 -----~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~-----~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~ 180 (297)
T 2pm7_B 111 -----EYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHA-----IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN 180 (297)
T ss_dssp -----GGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCS-----SCEEEEEECCCC------------CCEEEEEETTS
T ss_pred -----CCCcEEEEEECCCcEEEEEecCCCceeeeeeeccc-----CccceEeecCCcccccccCCCCCCcceEEEEcCCC
Confidence 1278999999999999999987632 23334333 38999999997 4678855 999
Q ss_pred eEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCC--CcEEEEEecCCeEEEEecCCce---EeEEe--ccccCC
Q 022019 195 SVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTH--TGMLAIGSYSQTSAIYREDNME---LLYVL--HGQEGG 267 (304)
Q Consensus 195 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~--~~~l~~~~~dg~i~i~d~~~~~---~~~~~--~~~~~~ 267 (304)
.|++||++........ .....+|...|.+++|+|++ +.+|++|+.|+.|+|||++... ....+ ..|...
T Consensus 181 ~v~lwd~~~~~~~~~~----~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~ 256 (297)
T 2pm7_B 181 LVKIWKYNSDAQTYVL----ESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDV 256 (297)
T ss_dssp CEEEEEEETTTTEEEE----EEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSC
T ss_pred cEEEEEEcCCCceEEE----EEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCc
Confidence 9999999864322222 22336789999999999954 5899999999999999997642 12233 467889
Q ss_pred eEEEEECCCCcEEEEeeccCCeEEEEecc
Q 022019 268 VTHVQFSRDGNYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 268 v~~~~~~~~~~~l~~~~~~d~~i~vwd~~ 296 (304)
|.+++|+|+|++|++++ .|+.|++|+..
T Consensus 257 v~~~~~s~~g~~las~~-~D~~v~lw~~~ 284 (297)
T 2pm7_B 257 LWRASWSLSGNVLALSG-GDNKVTLWKEN 284 (297)
T ss_dssp EEEEEECSSSCCEEEEE-TTSCEEEEEEC
T ss_pred EEEEEECCCCCEEEEEc-CCCcEEEEEEC
Confidence 99999999999999999 99999999986
No 30
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-34 Score=231.78 Aligned_cols=219 Identities=21% Similarity=0.311 Sum_probs=160.5
Q ss_pred eeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcc
Q 022019 52 QFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHM 131 (304)
Q Consensus 52 ~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 131 (304)
.+..+.+|.+.|.+++|+|+|++|++|+.|++|++||+...... .........|...|.+++|
T Consensus 99 ~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~-------------~~~~~~~~~h~~~v~~v~~---- 161 (330)
T 2hes_X 99 LLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEE-------------YECISVLQEHSQDVKHVIW---- 161 (330)
T ss_dssp EEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCC-------------CEEEEEECCCSSCEEEEEE----
T ss_pred eEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCC-------------eEEEEEeccCCCceEEEEE----
Confidence 45578899999999999999999999999999999999532110 0111234457788999988
Q ss_pred ceeCCCccEEEEEeCCCCEEEEEcCCC--eeeEEeecccccccccceEEEEECCC--CcEEEEE-cCCeEEEEEcCCCCc
Q 022019 132 SASDPTSCVFASTTRDHPIHLWDATTG--LLRCTYRAYDAVDEITAAFSVAFNPT--GTKIFAG-YNKSVRVFDVHRPGR 206 (304)
Q Consensus 132 ~~~~~~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~~~~~~v~~i~~~~~--~~~l~~~-~d~~i~v~d~~~~~~ 206 (304)
+|++.+|++++.|++|++||+.++ +....+..|.. .|.+++|+|+ +..|+++ .|++|++||++....
T Consensus 162 ---~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~ 233 (330)
T 2hes_X 162 ---HPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEG-----TVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDE 233 (330)
T ss_dssp ---CSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSS-----CEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECT
T ss_pred ---CCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCC-----cEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCc
Confidence 678999999999999999998876 45555655544 8999999998 6678855 999999999975321
Q ss_pred cceeeeeeeccc-cccccceeEEEeecCCCcEEEEEecCCeEEEEecCCce--EeEE-eccccC-CeEEEEECC--CCcE
Q 022019 207 DFEKYSTLKGNK-EGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME--LLYV-LHGQEG-GVTHVQFSR--DGNY 279 (304)
Q Consensus 207 ~~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~--~~~~-~~~~~~-~v~~~~~~~--~~~~ 279 (304)
............ ..|...|.+++|+| ++ +|++++.||.|++||..+++ .... +.+|.. .|.+++|+| ++++
T Consensus 234 ~~~~~~~~~~~~~~~h~~~v~~v~~s~-~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~ 311 (330)
T 2hes_X 234 DDQQEWVCEAILPDVHKRQVYNVAWGF-NG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTI 311 (330)
T ss_dssp TSCEEEEEEEECCSCCSSCEEEEEECT-TS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CC
T ss_pred cccceeEEeeecccccccceEEEEEcC-CC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceE
Confidence 111111111112 23788899999998 55 78999999999999998763 3333 357877 899999999 7899
Q ss_pred EEEeeccCCeEEEEecccc
Q 022019 280 LYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 280 l~~~~~~d~~i~vwd~~~~ 298 (304)
|++|+ .||+|++||+++.
T Consensus 312 las~s-~Dg~v~~W~~~~~ 329 (330)
T 2hes_X 312 LATGG-DDGIVNFWSLEKA 329 (330)
T ss_dssp EEEEE-TTSEEEEEEC---
T ss_pred EEEec-CCCcEEEEEeccC
Confidence 99999 9999999998753
No 31
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2e-35 Score=236.52 Aligned_cols=212 Identities=15% Similarity=0.271 Sum_probs=165.5
Q ss_pred eecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
.+.+|.+.|++++|+|+|++||+|+.|++|+|||+.++.. ........|...|.+++|.|.
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~---------------~~~~~l~gH~~~V~~v~~~~~---- 68 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQ---------------ILIADLRGHEGPVWQVAWAHP---- 68 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEE---------------EEEEEEECCSSCEEEEEECCG----
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCc---------------EEEEEEcCCCccEEEEEeCCC----
Confidence 4678999999999999999999999999999999874321 011234567889999998431
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCCe--eeEEeecccccccccceEEEEECCC--CcEEEEE-cCCeEEEEEcCCCCccce
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTGL--LRCTYRAYDAVDEITAAFSVAFNPT--GTKIFAG-YNKSVRVFDVHRPGRDFE 209 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~~~~~~v~~i~~~~~--~~~l~~~-~d~~i~v~d~~~~~~~~~ 209 (304)
.++++|++|+.|++|++||+++++ ....+..|. ..|.+++|+|+ +.+|+++ .|+.|++||++....
T Consensus 69 -~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~-----~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~--- 139 (316)
T 3bg1_A 69 -MYGNILASCSYDRKVIIWREENGTWEKSHEHAGHD-----SSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQ--- 139 (316)
T ss_dssp -GGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCS-----SCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSC---
T ss_pred -CCCCEEEEEECCCEEEEEECCCCcceEEEEccCCC-----CceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCC---
Confidence 147899999999999999998874 334444443 38999999998 7788866 999999999976321
Q ss_pred eeeeeeccccccccceeEEEeecCC----------------CcEEEEEecCCeEEEEecCCc---eEeEEeccccCCeEE
Q 022019 210 KYSTLKGNKEGQAGIMSAIAFSPTH----------------TGMLAIGSYSQTSAIYREDNM---ELLYVLHGQEGGVTH 270 (304)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~~~~~p~~----------------~~~l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~~v~~ 270 (304)
........+|...+.+++|+|+. +.+|++|+.|+.|++||++.. +++..+.+|...|.+
T Consensus 140 --~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~ 217 (316)
T 3bg1_A 140 --WEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRD 217 (316)
T ss_dssp --EEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEE
T ss_pred --cceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEE
Confidence 11123346788889999999942 368999999999999999754 577888999999999
Q ss_pred EEECCCC----cEEEEeeccCCeEEEEeccc
Q 022019 271 VQFSRDG----NYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 271 ~~~~~~~----~~l~~~~~~d~~i~vwd~~~ 297 (304)
++|+|++ .+|++++ .|++|++|++++
T Consensus 218 v~~sp~~~~~~~~las~s-~D~~v~iw~~~~ 247 (316)
T 3bg1_A 218 VAWAPSIGLPTSTIASCS-QDGRVFIWTCDD 247 (316)
T ss_dssp EECCCCSSCSCCEEEEEE-TTCEEEEEECSS
T ss_pred EEecCCCCCCCceEEEEc-CCCeEEEEEccC
Confidence 9999987 7899999 999999999876
No 32
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.8e-34 Score=235.28 Aligned_cols=206 Identities=13% Similarity=0.160 Sum_probs=162.0
Q ss_pred cCCCCceeEEEEcCCCCeEEE--ecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 57 SIPNNFLKGIKWSPDGSSFLT--SSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 57 ~~h~~~V~~i~~s~~~~~l~s--~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
..+...+.+++|||||+++++ ++.|++|+|||+.++... ....+...|.+++|
T Consensus 130 ~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~------------------~~~~~~~~V~~v~f------- 184 (365)
T 4h5i_A 130 TNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEK------------------FEIETRGEVKDLHF------- 184 (365)
T ss_dssp CCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEE------------------EEEECSSCCCEEEE-------
T ss_pred CCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEE------------------EEeCCCCceEEEEE-------
Confidence 445677999999999998764 457999999999865332 23346677888877
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCC----eEEEEEcCCCCccce
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNK----SVRVFDVHRPGRDFE 209 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~----~i~v~d~~~~~~~~~ 209 (304)
+|+|+++++++.+ .+.+|+..++......... .+...|.+++|+|++++++++ .|+ .+++|++........
T Consensus 185 spdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~---~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~ 260 (365)
T 4h5i_A 185 STDGKVVAYITGS-SLEVISTVTGSCIARKTDF---DKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVL 260 (365)
T ss_dssp CTTSSEEEEECSS-CEEEEETTTCCEEEEECCC---CTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEE
T ss_pred ccCCceEEeccce-eEEEEEeccCcceeeeecC---CCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecce
Confidence 8899999999855 5777777777665433321 233389999999999999954 665 688888865322111
Q ss_pred eeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEe-ccccCCeEEEEECCCCcEEEEeeccCC
Q 022019 210 KYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVL-HGQEGGVTHVQFSRDGNYLYTGGRKDP 288 (304)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~~d~ 288 (304)
. .....+|...|++++|+| ++.+|++|+.|+.|+|||+++++++..+ .+|...|++++|+|||++|++++ .|+
T Consensus 261 ~----~~~~~~~~~~V~~~~~Sp-dg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S-~D~ 334 (365)
T 4h5i_A 261 R----SKQVTNRFKGITSMDVDM-KGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVS-AAN 334 (365)
T ss_dssp E----EEEEESSCSCEEEEEECT-TSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEE-TTS
T ss_pred e----eeeecCCCCCeEeEEECC-CCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEe-CCC
Confidence 1 122356778899999999 7889999999999999999999999885 78999999999999999999999 999
Q ss_pred eEEEEeccc
Q 022019 289 YILCWDLRK 297 (304)
Q Consensus 289 ~i~vwd~~~ 297 (304)
+|+|||+..
T Consensus 335 tvrvw~ip~ 343 (365)
T 4h5i_A 335 TIHIIKLPL 343 (365)
T ss_dssp EEEEEECCT
T ss_pred eEEEEEcCC
Confidence 999999964
No 33
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1e-33 Score=228.78 Aligned_cols=216 Identities=22% Similarity=0.359 Sum_probs=181.0
Q ss_pred eeecCCCCceeEEEEcCC-CCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccc
Q 022019 54 RTSSIPNNFLKGIKWSPD-GSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMS 132 (304)
Q Consensus 54 ~~~~~h~~~V~~i~~s~~-~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 132 (304)
.+++||.+.|++|+|+|+ +++|+||+.||+|+|||+.+.+.... ........|...|.+++|
T Consensus 32 ~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~------------~~~~~l~~h~~~V~~~~~----- 94 (340)
T 4aow_A 32 GTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYG------------IPQRALRGHSHFVSDVVI----- 94 (340)
T ss_dssp EEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSE------------EEEEEECCCSSCEEEEEE-----
T ss_pred EEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccc------------eeeEEEeCCCCCEEEEEE-----
Confidence 478999999999999997 68999999999999999986543211 112234557788999988
Q ss_pred eeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceee
Q 022019 133 ASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKY 211 (304)
Q Consensus 133 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~ 211 (304)
+|++++|++++.|+.|++|+............+.. .+..+.+++++.+++++ .|+.+++||+...
T Consensus 95 --s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~------- 160 (340)
T 4aow_A 95 --SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTK-----DVLSVAFSSDNRQIVSGSRDKTIKLWNTLGV------- 160 (340)
T ss_dssp --CTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSS-----CEEEEEECTTSSCEEEEETTSCEEEECTTSC-------
T ss_pred --CCCCCEEEEEcccccceEEeecccceeeeecCCCC-----ceeEEEEeecCccceeecCCCeEEEEEeCCC-------
Confidence 77999999999999999999998887776665544 77889999999999965 9999999998753
Q ss_pred eeeeccccccccceeEEEeecCC-CcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeE
Q 022019 212 STLKGNKEGQAGIMSAIAFSPTH-TGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYI 290 (304)
Q Consensus 212 ~~~~~~~~~~~~~v~~~~~~p~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i 290 (304)
........+|...+..++|+++. ..++++++.|+.|++||+++++++..+.+|...|++++|+|++++|++++ .||.|
T Consensus 161 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s-~Dg~i 239 (340)
T 4aow_A 161 CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGG-KDGQA 239 (340)
T ss_dssp EEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE-TTCEE
T ss_pred ceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEe-CCCeE
Confidence 22223336778889999999854 35788999999999999999999999999999999999999999999999 99999
Q ss_pred EEEecccceee
Q 022019 291 LCWDLRKAVQV 301 (304)
Q Consensus 291 ~vwd~~~~~~~ 301 (304)
++||+++++.+
T Consensus 240 ~iwd~~~~~~~ 250 (340)
T 4aow_A 240 MLWDLNEGKHL 250 (340)
T ss_dssp EEEETTTTEEE
T ss_pred EEEEeccCcee
Confidence 99999988765
No 34
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.6e-34 Score=231.39 Aligned_cols=222 Identities=19% Similarity=0.335 Sum_probs=169.2
Q ss_pred eeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccc
Q 022019 53 FRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMS 132 (304)
Q Consensus 53 ~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 132 (304)
...+.+|.+.|.+++|+|++++|++|+.|++|++||+.+.... ........|...|.+++|
T Consensus 98 ~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~--------------~~~~~~~~h~~~v~~~~~----- 158 (345)
T 3fm0_A 98 VTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEY--------------ECVSVLNSHTQDVKHVVW----- 158 (345)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCE--------------EEEEEECCCCSCEEEEEE-----
T ss_pred EEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCe--------------EEEEEecCcCCCeEEEEE-----
Confidence 4578899999999999999999999999999999999754221 111233456778999888
Q ss_pred eeCCCccEEEEEeCCCCEEEEEcCCCeee--EEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccce
Q 022019 133 ASDPTSCVFASTTRDHPIHLWDATTGLLR--CTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFE 209 (304)
Q Consensus 133 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~ 209 (304)
+|++.+|++++.|+.|++||+++++.. ..+..|. ..|.+++|+|++++|+++ .|++|++||.........
T Consensus 159 --~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~-----~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~ 231 (345)
T 3fm0_A 159 --HPSQELLASASYDDTVKLYREEEDDWVCCATLEGHE-----STVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQG 231 (345)
T ss_dssp --CSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCS-----SCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTC
T ss_pred --CCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCC-----CceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCcc
Confidence 778999999999999999999887643 3444444 389999999999999965 999999999754322110
Q ss_pred --------eeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCce---------EeEEeccccCCeEEEE
Q 022019 210 --------KYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME---------LLYVLHGQEGGVTHVQ 272 (304)
Q Consensus 210 --------~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~---------~~~~~~~~~~~v~~~~ 272 (304)
....+......|...|.+++|+| .+..|++++.|+.|++|+..... ......+|...|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~ 310 (345)
T 3fm0_A 232 VACSGSDPSWKCICTLSGFHSRTIYDIAWCQ-LTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVA 310 (345)
T ss_dssp CCCC---CEEEEEEEECSSCSSCEEEEEECT-TTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEE
T ss_pred ceeeccCCccceeEEecCCCCCcEEEEEEec-CCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeE
Confidence 00111111123778899999999 67789999999999999986542 1223458999999999
Q ss_pred ECCCCc-EEEEeeccCCeEEEEecccceeee
Q 022019 273 FSRDGN-YLYTGGRKDPYILCWDLRKAVQVV 302 (304)
Q Consensus 273 ~~~~~~-~l~~~~~~d~~i~vwd~~~~~~~~ 302 (304)
|+|++. +|++++ .||+|++|++.+++.+.
T Consensus 311 ~~p~~~~~laS~s-~Dg~v~~W~~~~~~~~~ 340 (345)
T 3fm0_A 311 WNPKEPGLLASCS-DDGEVAFWKYQRPEGLH 340 (345)
T ss_dssp ECSSSTTEEEEEE-TTSCEEEEEECC-----
T ss_pred EeCCCceEEEEcC-CCCcEEEEEecCCCCcc
Confidence 999984 899999 99999999999887653
No 35
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.6e-33 Score=223.94 Aligned_cols=222 Identities=20% Similarity=0.321 Sum_probs=179.1
Q ss_pred eeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEE
Q 022019 36 LIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLV 115 (304)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (304)
+..|+...... ...+.+|...|.+++|+|++++|++|+.||.|++||+.++... ...
T Consensus 47 i~iw~~~~~~~------~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~-----------------~~~ 103 (312)
T 4ery_A 47 IKIWGAYDGKF------EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-----------------KTL 103 (312)
T ss_dssp EEEEETTTCCE------EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE-----------------EEE
T ss_pred EEEEeCCCccc------chhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEE-----------------EEE
Confidence 44555544432 2367899999999999999999999999999999999865332 133
Q ss_pred eecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCC
Q 022019 116 VTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNK 194 (304)
Q Consensus 116 ~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~ 194 (304)
..|...|.++.| +|++++|++++.||.|++||+++++....+..+.. .|.+++|+|++++++++ .|+
T Consensus 104 ~~~~~~v~~~~~-------~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~d~ 171 (312)
T 4ery_A 104 KGHSNYVFCCNF-------NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD-----PVSAVHFNRDGSLIVSSSYDG 171 (312)
T ss_dssp ECCSSCEEEEEE-------CSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSS-----CEEEEEECTTSSEEEEEETTS
T ss_pred cCCCCCEEEEEE-------cCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCC-----cEEEEEEcCCCCEEEEEeCCC
Confidence 446678888887 77899999999999999999999988887776654 89999999999999965 999
Q ss_pred eEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCe---EEE
Q 022019 195 SVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGV---THV 271 (304)
Q Consensus 195 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v---~~~ 271 (304)
.|++||++.... ...+ ...+...+..++|+| ++.+|++++.||.|++||+++++++..+.+|.... ...
T Consensus 172 ~i~~wd~~~~~~----~~~~---~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 243 (312)
T 4ery_A 172 LCRIWDTASGQC----LKTL---IDDDNPPVSFVKFSP-NGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFAN 243 (312)
T ss_dssp CEEEEETTTCCE----EEEE---CCSSCCCEEEEEECT-TSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEE
T ss_pred cEEEEECCCCce----eeEE---eccCCCceEEEEECC-CCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEE
Confidence 999999986421 1111 234566799999999 77899999999999999999999999998887643 233
Q ss_pred EECCCCcEEEEeeccCCeEEEEecccceee
Q 022019 272 QFSRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 272 ~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
...+++.+|++|+ .||.|++||+++++.+
T Consensus 244 ~~~~~~~~l~sg~-~dg~i~vwd~~~~~~~ 272 (312)
T 4ery_A 244 FSVTGGKWIVSGS-EDNLVYIWNLQTKEIV 272 (312)
T ss_dssp EECSSSCEEEECC-TTSCEEEEETTTCCEE
T ss_pred EEeCCCcEEEEEC-CCCEEEEEECCCchhh
Confidence 3446789999999 9999999999988654
No 36
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.8e-33 Score=228.46 Aligned_cols=228 Identities=16% Similarity=0.204 Sum_probs=183.9
Q ss_pred CCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCe
Q 022019 42 PPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGES 121 (304)
Q Consensus 42 ~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (304)
+.............+.+|.+.|++++|+|++++|++++.||.|++||+.+++... ....|...
T Consensus 14 ~~~~~~G~~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~-----------------~~~~h~~~ 76 (369)
T 3zwl_B 14 ENLYFQGSHMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLG-----------------TLDGHTGT 76 (369)
T ss_dssp CCCCSSCCSEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEE-----------------EECCCSSC
T ss_pred cceEEeccccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhh-----------------hhhhcCCc
Confidence 3333333334445789999999999999999999999999999999998654321 23346688
Q ss_pred EEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cC-----Ce
Q 022019 122 VYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YN-----KS 195 (304)
Q Consensus 122 v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d-----~~ 195 (304)
|.+++| +|++++|++++.||.|++||+.+++....+.. .. .+.+++|+|++++++++ .+ +.
T Consensus 77 v~~~~~-------~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~-----~v~~~~~~~~~~~l~~~~~~~~~~~g~ 143 (369)
T 3zwl_B 77 IWSIDV-------DCFTKYCVTGSADYSIKLWDVSNGQCVATWKS-PV-----PVKRVEFSPCGNYFLAILDNVMKNPGS 143 (369)
T ss_dssp EEEEEE-------CTTSSEEEEEETTTEEEEEETTTCCEEEEEEC-SS-----CEEEEEECTTSSEEEEEECCBTTBCCE
T ss_pred EEEEEE-------cCCCCEEEEEeCCCeEEEEECCCCcEEEEeec-CC-----CeEEEEEccCCCEEEEecCCccCCCCE
Confidence 999988 77899999999999999999999988887763 22 89999999999999965 77 99
Q ss_pred EEEEEcCCCCccceeeee---eecccccccc--ceeEEEeecCCCcEEEEEecCCeEEEEecCC-ceEeEEeccccCCeE
Q 022019 196 VRVFDVHRPGRDFEKYST---LKGNKEGQAG--IMSAIAFSPTHTGMLAIGSYSQTSAIYREDN-MELLYVLHGQEGGVT 269 (304)
Q Consensus 196 i~v~d~~~~~~~~~~~~~---~~~~~~~~~~--~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~v~ 269 (304)
|++||++........... .......+.. .+.+++|+| ++.+|++++.||.|++||+++ ..++..+..|...|.
T Consensus 144 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~ 222 (369)
T 3zwl_B 144 INIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWST-KGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSIS 222 (369)
T ss_dssp EEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECG-GGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEE
T ss_pred EEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcC-CCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCcee
Confidence 999999864322111110 0011123333 799999999 788999999999999999998 788999999999999
Q ss_pred EEEECCCCcEEEEeeccCCeEEEEecccceee
Q 022019 270 HVQFSRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 270 ~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
+++|+|++.+|++++ .|+.|++||+++++.+
T Consensus 223 ~~~~~~~~~~l~~~~-~d~~i~v~d~~~~~~~ 253 (369)
T 3zwl_B 223 DMQFSPDLTYFITSS-RDTNSFLVDVSTLQVL 253 (369)
T ss_dssp EEEECTTSSEEEEEE-TTSEEEEEETTTCCEE
T ss_pred EEEECCCCCEEEEec-CCceEEEEECCCCcee
Confidence 999999999999999 9999999999987654
No 37
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.1e-33 Score=228.55 Aligned_cols=252 Identities=18% Similarity=0.264 Sum_probs=178.8
Q ss_pred hcHHhhccccccCcceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCcccccc
Q 022019 21 VTEAAQENQQEYTWPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNA 100 (304)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~ 100 (304)
+..+++.|...+.| ++....... ....+.+.+|.+.|.+++|+|+|++|++++.|+.|++|+............
T Consensus 53 ~l~S~s~D~~i~vW-----d~~~~~~~~-~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~ 126 (340)
T 4aow_A 53 MILSASRDKTIIMW-----KLTRDETNY-GIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVG 126 (340)
T ss_dssp EEEEEETTSCEEEE-----EECCSSSCS-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred EEEEEcCCCeEEEE-----ECCCCCccc-ceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecC
Confidence 34445555555544 444332211 123457889999999999999999999999999999999876543211110
Q ss_pred cc-------ccc--------cCCc-----------cceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEE
Q 022019 101 CS-------LAK--------DQDS-----------YEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWD 154 (304)
Q Consensus 101 ~~-------~~~--------~~~~-----------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d 154 (304)
.. ... ..+. ........+...+..++|.+ .+...++++++.|+.|++||
T Consensus 127 ~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~-----~~~~~~~~s~~~d~~i~i~d 201 (340)
T 4aow_A 127 HTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSP-----NSSNPIIVSCGWDKLVKVWN 201 (340)
T ss_dssp CSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECS-----CSSSCEEEEEETTSCEEEEE
T ss_pred CCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEcc-----CCCCcEEEEEcCCCEEEEEE
Confidence 00 000 0000 00011122345566666533 33456889999999999999
Q ss_pred cCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecC
Q 022019 155 ATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPT 233 (304)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 233 (304)
+++++....+..+.. .|.+++|+|++++|+++ .|+.|++||++... .+..+ .+...+.+++|+|
T Consensus 202 ~~~~~~~~~~~~h~~-----~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~----~~~~~-----~~~~~v~~~~~~~- 266 (340)
T 4aow_A 202 LANCKLKTNHIGHTG-----YLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK----HLYTL-----DGGDIINALCFSP- 266 (340)
T ss_dssp TTTTEEEEEECCCSS-----CEEEEEECTTSSEEEEEETTCEEEEEETTTTE----EEEEE-----ECSSCEEEEEECS-
T ss_pred CCCCceeeEecCCCC-----cEEEEEECCCCCEEEEEeCCCeEEEEEeccCc----eeeee-----cCCceEEeeecCC-
Confidence 999998888876654 89999999999999965 99999999998641 12222 2335699999999
Q ss_pred CCcEEEEEecCCeEEEEecCCceEeEEec---------cccCCeEEEEECCCCcEEEEeeccCCeEEEEeccccee
Q 022019 234 HTGMLAIGSYSQTSAIYREDNMELLYVLH---------GQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQ 300 (304)
Q Consensus 234 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~ 300 (304)
++. +++++.|+.|++||++.+..+..+. +|...|++++|+|+|++|++|+ .||.|+|||+++|++
T Consensus 267 ~~~-~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs-~Dg~v~iW~~~tGtr 340 (340)
T 4aow_A 267 NRY-WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGY-TDNLVRVWQVTIGTR 340 (340)
T ss_dssp SSS-EEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEE-TTSCEEEEEEEC---
T ss_pred CCc-eeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEe-CCCEEEEEeCCCcCC
Confidence 564 5567789999999999887766553 6788999999999999999999 999999999999864
No 38
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2.3e-33 Score=227.15 Aligned_cols=226 Identities=17% Similarity=0.278 Sum_probs=169.9
Q ss_pred eeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEE
Q 022019 36 LIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLV 115 (304)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (304)
+..|++..... +..+.+|.+.|.+++|+|++++|++++.|++|++||+...... ... ..
T Consensus 100 v~lwd~~~~~~------~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~-~~~--------------~~ 158 (343)
T 2xzm_R 100 LRLWDLRTGTT------YKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKF-SSA--------------EK 158 (343)
T ss_dssp EEEEETTSSCE------EEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEE-ECC--------------TT
T ss_pred EEEEECCCCcE------EEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCcee-eee--------------cc
Confidence 44566555433 3467899999999999999999999999999999998632110 000 00
Q ss_pred eecCCeEEEEeecCcc---ceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-
Q 022019 116 VTEGESVYDFCWFPHM---SASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG- 191 (304)
Q Consensus 116 ~~~~~~v~~~~~~~~~---~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~- 191 (304)
..|...+.+++|.|.. ..+.|.+.+|++++.||.|++||. ..+....+..|.. .|.+++|+|++++|+++
T Consensus 159 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~-----~v~~~~~s~~g~~l~sgs 232 (343)
T 2xzm_R 159 ENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHES-----NVNHLSISPNGKYIATGG 232 (343)
T ss_dssp TSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSS-----CEEEEEECTTSSEEEEEE
T ss_pred cCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccc-----cceEEEECCCCCEEEEEc
Confidence 1345678899887653 223455689999999999999994 4555566665544 89999999999999965
Q ss_pred cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeE--Eec-------
Q 022019 192 YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLY--VLH------- 262 (304)
Q Consensus 192 ~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~--~~~------- 262 (304)
.|+.|++||++........ ..+...|.+++|+| ++.+++ ++.|+.|++||+.+++... .+.
T Consensus 233 ~dg~v~iwd~~~~~~~~~~--------~~~~~~v~~v~~sp-~~~~la-~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~ 302 (343)
T 2xzm_R 233 KDKKLLIWDILNLTYPQRE--------FDAGSTINQIAFNP-KLQWVA-VGTDQGVKIFNLMTQSKAPVCTIEAEPITKA 302 (343)
T ss_dssp TTCEEEEEESSCCSSCSEE--------EECSSCEEEEEECS-SSCEEE-EEESSCEEEEESSSCCSCSEEECCCCSGGGB
T ss_pred CCCeEEEEECCCCccccee--------ecCCCcEEEEEECC-CCCEEE-EECCCCEEEEEeCCCCCCceEEeecCcchhh
Confidence 9999999999643322211 11234599999999 666665 4568889999998765433 433
Q ss_pred ----cccCCeEEEEECCCCcEEEEeeccCCeEEEEecccce
Q 022019 263 ----GQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAV 299 (304)
Q Consensus 263 ----~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~ 299 (304)
+|...|.+++|+|+|++|++|+ .||.|++|+++++.
T Consensus 303 ~~~~~~~~~v~~~~~sp~g~~l~sg~-~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 303 EGQKGKNPQCTSLAWNALGKKLFAGF-TDGVIRTFSFETSA 342 (343)
T ss_dssp TTBCCSCCCEEEEEECSSSCCEEEEE-TTSEEEEEEEEEEE
T ss_pred hhhcCCCCceEEEEECCCCCeEEEec-CCceEEEEEEEccC
Confidence 6778899999999999999999 99999999998874
No 39
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=6.1e-33 Score=241.08 Aligned_cols=225 Identities=17% Similarity=0.281 Sum_probs=171.5
Q ss_pred eeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccc
Q 022019 53 FRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMS 132 (304)
Q Consensus 53 ~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 132 (304)
...+.+|.+.|++++|+|+|++|++|+.|++|++||+.++........... ....|...|.+++|
T Consensus 183 ~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~----------~~~~h~~~V~~v~~----- 247 (611)
T 1nr0_A 183 KSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSL----------KNVAHSGSVFGLTW----- 247 (611)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTS----------SSCSSSSCEEEEEE-----
T ss_pred eeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccc----------cccccCCCEEEEEE-----
Confidence 447889999999999999999999999999999999886654322110000 01146788999988
Q ss_pred eeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeeccc--------------------------------------cccccc
Q 022019 133 ASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYD--------------------------------------AVDEIT 174 (304)
Q Consensus 133 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--------------------------------------~~~~~~ 174 (304)
+|++++|++++.|++|++||+.+++....+.... ..+|..
T Consensus 248 --spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~ 325 (611)
T 1nr0_A 248 --SPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNK 325 (611)
T ss_dssp --CTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSS
T ss_pred --CCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCC
Confidence 7799999999999999999999887766553210 013556
Q ss_pred ceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCcccee-------ee--------------------eee-----------
Q 022019 175 AAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEK-------YS--------------------TLK----------- 215 (304)
Q Consensus 175 ~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~-------~~--------------------~~~----------- 215 (304)
.|.+++|+|++++|+++ .|+.|++||+.+....... +. ...
T Consensus 326 ~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~ 405 (611)
T 1nr0_A 326 AITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKA 405 (611)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSC
T ss_pred CEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccce
Confidence 89999999999999965 9999999998753210000 00 000
Q ss_pred -------------c-----------------------cccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceE--
Q 022019 216 -------------G-----------------------NKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMEL-- 257 (304)
Q Consensus 216 -------------~-----------------------~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~-- 257 (304)
. ....+...+.+++|+| ++.+|++|+.|+.|++||+..+..
T Consensus 406 ~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~sp-dg~~lasgs~D~~v~lwd~~~~~~~~ 484 (611)
T 1nr0_A 406 VANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSN-DKQFVAVGGQDSKVHVYKLSGASVSE 484 (611)
T ss_dssp CEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECT-TSCEEEEEETTSEEEEEEEETTEEEE
T ss_pred eeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeC-CCCEEEEeCCCCeEEEEEccCCceee
Confidence 0 0001234578899999 788999999999999999987643
Q ss_pred eEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEeccc
Q 022019 258 LYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 258 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~ 297 (304)
+.. .+|...|++++|+|+|++|++++ .|++|++|++.+
T Consensus 485 ~~~-~~h~~~v~~v~fspdg~~las~s-~d~~v~~w~~~~ 522 (611)
T 1nr0_A 485 VKT-IVHPAEITSVAFSNNGAFLVATD-QSRKVIPYSVAN 522 (611)
T ss_dssp EEE-EECSSCEEEEEECTTSSEEEEEE-TTSCEEEEEGGG
T ss_pred eec-cCCCCceEEEEECCCCCEEEEEc-CCCCEEEEEcCC
Confidence 334 67999999999999999999999 999999999987
No 40
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-33 Score=229.18 Aligned_cols=214 Identities=18% Similarity=0.272 Sum_probs=173.0
Q ss_pred eeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccc
Q 022019 53 FRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMS 132 (304)
Q Consensus 53 ~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 132 (304)
...+.+|.+.|++++|+|++++|++|+.||.|++||+.... .........|...|.+++|.+.
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~---------------~~~~~~~~~h~~~v~~~~~~~~-- 66 (379)
T 3jrp_A 4 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGET---------------HKLIDTLTGHEGPVWRVDWAHP-- 66 (379)
T ss_dssp -CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTE---------------EEEEEEECCCSSCEEEEEECCG--
T ss_pred cEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCc---------------ceeeeEecCCCCcEEEEEeCCC--
Confidence 34778999999999999999999999999999999986321 1111233457789999998331
Q ss_pred eeCCCccEEEEEeCCCCEEEEEcCCCe--eeEEeecccccccccceEEEEECCC--CcEEEEE-cCCeEEEEEcCCCCcc
Q 022019 133 ASDPTSCVFASTTRDHPIHLWDATTGL--LRCTYRAYDAVDEITAAFSVAFNPT--GTKIFAG-YNKSVRVFDVHRPGRD 207 (304)
Q Consensus 133 ~~~~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~~~~~~v~~i~~~~~--~~~l~~~-~d~~i~v~d~~~~~~~ 207 (304)
.++++|++++.||.|++||+.+++ ....+..+.. .|.+++|+|+ +.+++++ .|+.|++||++.....
T Consensus 67 ---~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~ 138 (379)
T 3jrp_A 67 ---KFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSA-----SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTT 138 (379)
T ss_dssp ---GGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSS-----CEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCC
T ss_pred ---CCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCc-----ceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCce
Confidence 238899999999999999999887 4444444433 8999999999 8888865 9999999999874321
Q ss_pred ceeeeeeeccccccccceeEEEeecC------------CCcEEEEEecCCeEEEEecCCce----EeEEeccccCCeEEE
Q 022019 208 FEKYSTLKGNKEGQAGIMSAIAFSPT------------HTGMLAIGSYSQTSAIYREDNME----LLYVLHGQEGGVTHV 271 (304)
Q Consensus 208 ~~~~~~~~~~~~~~~~~v~~~~~~p~------------~~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~v~~~ 271 (304)
.. . ....|...|.+++|+|. ++.++++|+.||.|++||++.+. ++..+.+|...|.++
T Consensus 139 ~~--~----~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~ 212 (379)
T 3jrp_A 139 SP--I----IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDV 212 (379)
T ss_dssp CE--E----EEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEE
T ss_pred ee--E----EecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEE
Confidence 11 1 12567788999999995 47799999999999999997653 566788999999999
Q ss_pred EECCC---CcEEEEeeccCCeEEEEecccc
Q 022019 272 QFSRD---GNYLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 272 ~~~~~---~~~l~~~~~~d~~i~vwd~~~~ 298 (304)
+|+|+ +.+|++++ .||.|++||++++
T Consensus 213 ~~sp~~~~~~~l~s~~-~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 213 AWSPTVLLRSYLASVS-QDRTCIIWTQDNE 241 (379)
T ss_dssp EECCCCSSSEEEEEEE-TTSCEEEEEESST
T ss_pred EECCCCCCCCeEEEEe-CCCEEEEEeCCCC
Confidence 99999 89999999 9999999999986
No 41
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.1e-32 Score=229.19 Aligned_cols=237 Identities=15% Similarity=0.290 Sum_probs=170.8
Q ss_pred eeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccc----------
Q 022019 36 LIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAK---------- 105 (304)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~---------- 105 (304)
+++|+...+.... +..+.+|.+.|++|+|+|+|++||+|+.||+|+|||+.+++.......+....
T Consensus 127 V~lWd~~tg~~~~----~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l 202 (420)
T 4gga_A 127 VYLWSASSGDILQ----LLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYIL 202 (420)
T ss_dssp EEEEETTTCCEEE----EEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEE
T ss_pred EEEEECCCCCEEE----EEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEE
Confidence 4455555543332 12456788999999999999999999999999999998876533322111000
Q ss_pred --------------cCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeee----EEeecc
Q 022019 106 --------------DQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLR----CTYRAY 167 (304)
Q Consensus 106 --------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~----~~~~~~ 167 (304)
............|...+..+.| +|++.++++++.|+.+++|+..+++.. .....
T Consensus 203 ~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~-------~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~- 274 (420)
T 4gga_A 203 SSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRW-------APDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQ- 274 (420)
T ss_dssp EEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEE-------CTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECC-
T ss_pred EEEeCCCceeEeeecccceeeEEecccccceeeeee-------cCCCCeeeeeeccccceEEeeccccccceeeeeecc-
Confidence 0011111222334445555555 789999999999999999999876532 22332
Q ss_pred cccccccceEEEEECCCCc-EEEE--E-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEe-
Q 022019 168 DAVDEITAAFSVAFNPTGT-KIFA--G-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS- 242 (304)
Q Consensus 168 ~~~~~~~~v~~i~~~~~~~-~l~~--~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~- 242 (304)
+...|.+++|+|.+. .+++ | .|++|++||++++. ....+ . +...+.++.|+|+ +..+++++
T Consensus 275 ----~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~----~~~~~----~-~~~~v~~~~~~~~-~~~lv~~sg 340 (420)
T 4gga_A 275 ----HQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA----CLSAV----D-AHSQVCSILWSPH-YKELISGHG 340 (420)
T ss_dssp ----CSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTE----EEEEE----E-CSSCEEEEEEETT-TTEEEEEEC
T ss_pred ----cCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccc----cceee----c-cccceeeeeecCC-CCeEEEEEe
Confidence 334899999999764 4443 3 78999999998741 11221 1 2345889999994 55555544
Q ss_pred -cCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEecccce
Q 022019 243 -YSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAV 299 (304)
Q Consensus 243 -~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~ 299 (304)
.|+.|+|||+.+++++.++.+|.+.|++++|+|+|++|++|+ .|++|++||+.+..
T Consensus 341 ~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s-~D~tvriWdv~~~~ 397 (420)
T 4gga_A 341 FAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAA-ADETLRLWRCFELD 397 (420)
T ss_dssp TTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEE-TTTEEEEECCSCSS
T ss_pred cCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEe-cCCeEEEEECCCCC
Confidence 789999999999999999999999999999999999999999 99999999997643
No 42
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=8e-33 Score=227.38 Aligned_cols=214 Identities=12% Similarity=0.127 Sum_probs=172.9
Q ss_pred ceeeeecCCCCceeEEEEcCCC-CeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecC
Q 022019 51 NQFRTSSIPNNFLKGIKWSPDG-SSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFP 129 (304)
Q Consensus 51 ~~~~~~~~h~~~V~~i~~s~~~-~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 129 (304)
.....+.+|.+.|++++|+|++ ++|++|+.||.|++||+.++...... ....|...|.+++|
T Consensus 64 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~---------------~~~~h~~~v~~~~~-- 126 (383)
T 3ei3_B 64 KLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFI---------------QGMGPGDAITGMKF-- 126 (383)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEE---------------CCCSTTCBEEEEEE--
T ss_pred ceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceee---------------ecCCcCCceeEEEe--
Confidence 3455788999999999999998 89999999999999999865432111 01246789999998
Q ss_pred ccceeCC-CccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCcc
Q 022019 130 HMSASDP-TSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRD 207 (304)
Q Consensus 130 ~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~ 207 (304)
+| ++.+|++++.|+.|++||+.+ .....+..+. .+...|.+++|+|++++++++ .|+.|++||++. .
T Consensus 127 -----~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~--~- 195 (383)
T 3ei3_B 127 -----NQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTD--SWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDG--H- 195 (383)
T ss_dssp -----ETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCC--CSSCCEEEEEEETTTTEEEEEETTSEEEEEETTS--C-
T ss_pred -----CCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccC--CCCCCeEEEEECCCCCEEEEECCCCCEEEEECCC--C-
Confidence 55 678999999999999999986 4444444333 233479999999999999965 999999999953 1
Q ss_pred ceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCC----ceEeEEeccccCCeEEEEECC-CCcEEEE
Q 022019 208 FEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN----MELLYVLHGQEGGVTHVQFSR-DGNYLYT 282 (304)
Q Consensus 208 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~----~~~~~~~~~~~~~v~~~~~~~-~~~~l~~ 282 (304)
....+ .+|...|.+++|+|++..+|++|+.|+.|++||+++ +.++..+ +|...|++++|+| ++.+|++
T Consensus 196 --~~~~~----~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~ 268 (383)
T 3ei3_B 196 --EIFKE----KLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLT 268 (383)
T ss_dssp --EEEEE----ECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEE
T ss_pred --EEEEe----ccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEE
Confidence 12222 567888999999995444999999999999999987 5666666 6999999999999 9999999
Q ss_pred eeccCCeEEEEeccccee
Q 022019 283 GGRKDPYILCWDLRKAVQ 300 (304)
Q Consensus 283 ~~~~d~~i~vwd~~~~~~ 300 (304)
++ .|+.|++||+++++.
T Consensus 269 ~~-~d~~i~iwd~~~~~~ 285 (383)
T 3ei3_B 269 TD-QRNEIRVYSSYDWSK 285 (383)
T ss_dssp EE-SSSEEEEEETTBTTS
T ss_pred Ec-CCCcEEEEECCCCcc
Confidence 99 999999999988754
No 43
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=6.3e-33 Score=239.73 Aligned_cols=199 Identities=26% Similarity=0.464 Sum_probs=168.8
Q ss_pred eeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccc
Q 022019 53 FRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMS 132 (304)
Q Consensus 53 ~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 132 (304)
+..+.+|...|.+++|+|+|++|++++.|+.|++||.... .......|...|.+++|
T Consensus 378 ~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~------------------~~~~~~~~~~~v~~~~~----- 434 (577)
T 2ymu_A 378 LQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQ------------------LLQTLTGHSSSVWGVAF----- 434 (577)
T ss_dssp EEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTCC------------------EEEEEECCSSCEEEEEE-----
T ss_pred EEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCC------------------EEEEecCCCCCeEEEEE-----
Confidence 4467889999999999999999999999999999996421 11233456678888877
Q ss_pred eeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceee
Q 022019 133 ASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKY 211 (304)
Q Consensus 133 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~ 211 (304)
+|++++|++++.|+.|++||+ +++....+..+.. .|.+++|+|++++|+++ .|+.|++||... . ..
T Consensus 435 --s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~-----~v~~~~~spd~~~las~~~d~~i~iw~~~~--~---~~ 501 (577)
T 2ymu_A 435 --SPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSS-----SVRGVAFSPDGQTIASASDDKTVKLWNRNG--Q---LL 501 (577)
T ss_dssp --CTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSS-----CEEEEEECTTSCEEEEEETTSEEEEEETTS--C---EE
T ss_pred --CCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCC-----CEEEEEEcCCCCEEEEEeCCCEEEEEcCCC--C---EE
Confidence 789999999999999999996 4566666665554 89999999999999965 999999999642 1 22
Q ss_pred eeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEE
Q 022019 212 STLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYIL 291 (304)
Q Consensus 212 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~ 291 (304)
.. ..+|...|++++|+| ++.+|++++.||.|++||. +++++..+.+|...|++++|+|||++|++++ .|++|+
T Consensus 502 ~~----~~~h~~~v~~l~~s~-dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~-~D~~i~ 574 (577)
T 2ymu_A 502 QT----LTGHSSSVRGVAFSP-DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASAS-SDKTVK 574 (577)
T ss_dssp EE----EECCSSCEEEEEECT-TSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEE-TTSCEE
T ss_pred EE----EeCCCCCEEEEEEcC-CCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEe-CCCEEE
Confidence 22 267888999999999 7789999999999999996 6788999999999999999999999999999 999999
Q ss_pred EEe
Q 022019 292 CWD 294 (304)
Q Consensus 292 vwd 294 (304)
+||
T Consensus 575 ~Wd 577 (577)
T 2ymu_A 575 LWN 577 (577)
T ss_dssp EEC
T ss_pred EeC
Confidence 997
No 44
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.2e-32 Score=220.53 Aligned_cols=242 Identities=14% Similarity=0.254 Sum_probs=173.4
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccc---------
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAK--------- 105 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~--------- 105 (304)
.+.+|+....+.... ..+.+|...|++++|+|++++|++|+.||+|++||+.+++.......+....
T Consensus 46 tV~iWd~~tg~~~~~----~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~ 121 (318)
T 4ggc_A 46 SVYLWSASSGDILQL----LQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYI 121 (318)
T ss_dssp EEEEEETTTCCEEEE----EECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTE
T ss_pred EEEEEECCCCCEEEE----EEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCE
Confidence 356777776654431 2456789999999999999999999999999999999876543322111000
Q ss_pred ---------------cCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeeccccc
Q 022019 106 ---------------DQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAV 170 (304)
Q Consensus 106 ---------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 170 (304)
............|...+..+.+ +++++++++++.||.|++||+++++......... .
T Consensus 122 l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~ 193 (318)
T 4ggc_A 122 LSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRW-------APDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTF-T 193 (318)
T ss_dssp EEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEE-------CTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEE-C
T ss_pred EEEEecCCceEeeecCCCceeEEEEcCccCceEEEEE-------cCCCCEEEEEecCcceeEEECCCCcccccceeee-c
Confidence 0011111222334444555544 7789999999999999999998765432211111 1
Q ss_pred ccccceEEEEECCCCcEEE---EE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEE--ecC
Q 022019 171 DEITAAFSVAFNPTGTKIF---AG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIG--SYS 244 (304)
Q Consensus 171 ~~~~~v~~i~~~~~~~~l~---~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~--~~d 244 (304)
.+...|.++.++|++..++ ++ .++.|++||.+..... .. ..+...+..+.|+|.+ ..++++ +.|
T Consensus 194 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~----~~-----~~~~~~v~~~~~~~~~-~~~~~~sg~~d 263 (318)
T 4ggc_A 194 QHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACL----SA-----VDAHSQVCSILWSPHY-KELISGHGFAQ 263 (318)
T ss_dssp CCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEE----EE-----EECSSCEEEEEEETTT-TEEEEEECTTT
T ss_pred ccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccc----cc-----ccceeeeeeeeecccc-cceEEEEEcCC
Confidence 2333889999999765443 34 7899999999764211 11 2345568899999954 455444 379
Q ss_pred CeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEecccce
Q 022019 245 QTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAV 299 (304)
Q Consensus 245 g~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~ 299 (304)
+.|++||+++++++.++.+|.+.|++++|+|+|++|++|+ .||+|+|||+.+..
T Consensus 264 ~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s-~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 264 NQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAA-ADETLRLWRCFELD 317 (318)
T ss_dssp CCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEE-TTTEEEEECCSCCC
T ss_pred CEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEe-cCCeEEEEECCCCC
Confidence 9999999999999999999999999999999999999999 99999999997653
No 45
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.1e-33 Score=250.82 Aligned_cols=210 Identities=10% Similarity=0.102 Sum_probs=173.7
Q ss_pred ecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeC
Q 022019 56 SSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASD 135 (304)
Q Consensus 56 ~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 135 (304)
..+|.+.|++++|+|++++||+|+.||+|+||+....+. .....+...|.+++| +
T Consensus 13 ~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~------------------~~~~~~~~~V~~l~f-------s 67 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEV------------------VIKLEDRSAIKEMRF-------V 67 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEE------------------EEECSSCCCEEEEEE-------E
T ss_pred ccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEE------------------EEEcCCCCCEEEEEE-------c
Confidence 458999999999999999999999999999999764321 122335678999988 6
Q ss_pred CCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeee-
Q 022019 136 PTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYST- 213 (304)
Q Consensus 136 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~- 213 (304)
| +++|++++.|++|++||+.+++....+..+ ..|++++|+|+++++++| .||.|++||++.... ..+..
T Consensus 68 p-g~~L~S~s~D~~v~lWd~~~~~~~~~~~~~------~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~--~~~~i~ 138 (902)
T 2oaj_A 68 K-GIYLVVINAKDTVYVLSLYSQKVLTTVFVP------GKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQL--SSFKLD 138 (902)
T ss_dssp T-TTEEEEEETTCEEEEEETTTCSEEEEEECS------SCEEEEECCTTCSEEEEEETTSCEEEEETTTTEE--EEEEEC
T ss_pred C-CCEEEEEECcCeEEEEECCCCcEEEEEcCC------CCEEEEEECCCCCEEEEEcCCCcEEEEECCCCcc--ccceec
Confidence 6 669999999999999999999888777522 289999999999999976 999999999986421 10000
Q ss_pred -ee---ccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccc------------------cCCeEEE
Q 022019 214 -LK---GNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQ------------------EGGVTHV 271 (304)
Q Consensus 214 -~~---~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~------------------~~~v~~~ 271 (304)
.. ....+|.++|.+++|+|+++..+++|+.||.| +||+++++++..+..| ...|+++
T Consensus 139 ~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v 217 (902)
T 2oaj_A 139 NLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQS 217 (902)
T ss_dssp CHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEE
T ss_pred cccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEE
Confidence 00 23367888999999999666789999999999 9999999998888765 4679999
Q ss_pred EECCCCcEEEEeeccCCeEEEEecccceee
Q 022019 272 QFSRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 272 ~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
+|+|+|.+|++++ .||.|++||+++++.+
T Consensus 218 ~fspdg~~lasgs-~Dg~i~lWd~~~g~~~ 246 (902)
T 2oaj_A 218 LYHPNSLHIITIH-EDNSLVFWDANSGHMI 246 (902)
T ss_dssp EECTTSSEEEEEE-TTCCEEEEETTTCCEE
T ss_pred EEcCCCCEEEEEE-CCCeEEEEECCCCcEE
Confidence 9999999999999 9999999999988765
No 46
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.6e-33 Score=224.24 Aligned_cols=216 Identities=18% Similarity=0.256 Sum_probs=163.7
Q ss_pred eeeecCCCCceeEEEEcC--CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCc
Q 022019 53 FRTSSIPNNFLKGIKWSP--DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPH 130 (304)
Q Consensus 53 ~~~~~~h~~~V~~i~~s~--~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 130 (304)
+..+.+|.+.|++++|+| ++++|++|+.|++|++||+.++... .......|...|.+++|.|.
T Consensus 50 ~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~---------------~~~~~~~h~~~V~~v~~~p~ 114 (316)
T 3bg1_A 50 IADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWE---------------KSHEHAGHDSSVNSVCWAPH 114 (316)
T ss_dssp EEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCC---------------EEEEECCCSSCCCEEEECCT
T ss_pred EEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcce---------------EEEEccCCCCceEEEEECCC
Confidence 346789999999999986 4899999999999999998754211 11123346678899988441
Q ss_pred cceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCC-----------------CcEEEEE-c
Q 022019 131 MSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPT-----------------GTKIFAG-Y 192 (304)
Q Consensus 131 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~-----------------~~~l~~~-~ 192 (304)
.++.+|++|+.|+.|++||++.+......... ..|...|.+++|+|+ +++|++| .
T Consensus 115 -----~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~ 187 (316)
T 3bg1_A 115 -----DYGLILACGSSDGAISLLTYTGEGQWEVKKIN--NAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGC 187 (316)
T ss_dssp -----TTCSCEEEECSSSCEEEEEECSSSCEEECCBT--TSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBT
T ss_pred -----CCCcEEEEEcCCCCEEEEecCCCCCcceeeee--ccccCCcceEEEccccCCccccccccccCccccceEEEecC
Confidence 12789999999999999999876322111111 123347889999997 3577755 9
Q ss_pred CCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCC---CcEEEEEecCCeEEEEecCCc---e-EeEEecccc
Q 022019 193 NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTH---TGMLAIGSYSQTSAIYREDNM---E-LLYVLHGQE 265 (304)
Q Consensus 193 d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~---~~~l~~~~~dg~i~i~d~~~~---~-~~~~~~~~~ 265 (304)
|+.|++||++... ... ....+.+|...|.+++|+|++ +.+|++|+.||+|++||++.. . ....+..|.
T Consensus 188 D~~v~lWd~~~~~-~~~----~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~ 262 (316)
T 3bg1_A 188 DNLIKLWKEEEDG-QWK----EEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFN 262 (316)
T ss_dssp TSBCCEEEECTTS-CEE----EEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECS
T ss_pred CCeEEEEEeCCCC-ccc----eeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCC
Confidence 9999999996421 111 222346789999999999953 378999999999999998762 1 233456788
Q ss_pred CCeEEEEECCCCcEEEEeeccCCeEEEEecc
Q 022019 266 GGVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 266 ~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~ 296 (304)
..|.+++|+|+|++|++++ .|+.|++|+..
T Consensus 263 ~~v~~v~~sp~g~~las~~-~D~~v~lw~~~ 292 (316)
T 3bg1_A 263 DVVWHVSWSITANILAVSG-GDNKVTLWKES 292 (316)
T ss_dssp SCEEEEEECTTTCCEEEEE-SSSCEEEEEEC
T ss_pred CcEEEEEEcCCCCEEEEEc-CCCeEEEEEEC
Confidence 9999999999999999999 99999999986
No 47
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.5e-32 Score=221.34 Aligned_cols=236 Identities=11% Similarity=0.096 Sum_probs=180.8
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCcccccc------ccccccCC
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNA------CSLAKDQD 108 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~------~~~~~~~~ 108 (304)
.+..|+....... ..+.+|.+.|.+++|+|++++|++++.||.|++||+.+++....... ..+.....
T Consensus 55 ~i~vwd~~~~~~~------~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~ 128 (369)
T 3zwl_B 55 SASVWYSLNGERL------GTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGN 128 (369)
T ss_dssp CEEEEETTTCCEE------EEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSS
T ss_pred EEEEEeCCCchhh------hhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCeEEEEEccCCC
Confidence 4556666655433 37789999999999999999999999999999999987765333221 00000000
Q ss_pred -------------ccceEEEee---------------------cCC--eEEEEeecCccceeCCCccEEEEEeCCCCEEE
Q 022019 109 -------------SYEASLVVT---------------------EGE--SVYDFCWFPHMSASDPTSCVFASTTRDHPIHL 152 (304)
Q Consensus 109 -------------~~~~~~~~~---------------------~~~--~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i 152 (304)
......... +.. .+.+++ ++|++++|++++.||.|++
T Consensus 129 ~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~~~~dg~i~i 201 (369)
T 3zwl_B 129 YFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAG-------WSTKGKYIIAGHKDGKISK 201 (369)
T ss_dssp EEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEE-------ECGGGCEEEEEETTSEEEE
T ss_pred EEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEE-------EcCCCCEEEEEcCCCEEEE
Confidence 000111110 001 344444 4789999999999999999
Q ss_pred EEcCC-CeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEe
Q 022019 153 WDATT-GLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAF 230 (304)
Q Consensus 153 ~d~~~-~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 230 (304)
||+++ ++....+..+.. .|.+++|+|++++|+++ .|+.|++||++... ....+ .+...+..++|
T Consensus 202 ~d~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~----~~~~~-----~~~~~~~~~~~ 267 (369)
T 3zwl_B 202 YDVSNNYEYVDSIDLHEK-----SISDMQFSPDLTYFITSSRDTNSFLVDVSTLQ----VLKKY-----ETDCPLNTAVI 267 (369)
T ss_dssp EETTTTTEEEEEEECCSS-----CEEEEEECTTSSEEEEEETTSEEEEEETTTCC----EEEEE-----ECSSCEEEEEE
T ss_pred EECCCCcEeEEEEecCCC-----ceeEEEECCCCCEEEEecCCceEEEEECCCCc----eeeee-----cCCCCceeEEe
Confidence 99998 677777776554 89999999999999965 99999999998742 11221 14567999999
Q ss_pred ecCCCcEEEEEecCC--------------eEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEecc
Q 022019 231 SPTHTGMLAIGSYSQ--------------TSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 231 ~p~~~~~l~~~~~dg--------------~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~ 296 (304)
+| ++.++++++.++ .+++||..+++++..+.+|...|++++|+|++++|++++ .||.|++|+++
T Consensus 268 ~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~dg~v~iw~~~ 345 (369)
T 3zwl_B 268 TP-LKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGG-EDGFIRLHHFE 345 (369)
T ss_dssp CS-SSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEE-TTSEEEEEEEC
T ss_pred cC-CCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEc-CCCeEEEEECc
Confidence 99 777888888888 899999999999999999999999999999999999999 99999999998
Q ss_pred cce
Q 022019 297 KAV 299 (304)
Q Consensus 297 ~~~ 299 (304)
++.
T Consensus 346 ~~~ 348 (369)
T 3zwl_B 346 KSY 348 (369)
T ss_dssp HHH
T ss_pred ccc
Confidence 764
No 48
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.8e-32 Score=226.71 Aligned_cols=234 Identities=20% Similarity=0.311 Sum_probs=178.4
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcC-CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceE
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSP-DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEAS 113 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~-~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (304)
.+..|+....... ...+..+.+|.+.|++++|+| ++.+|++|+.||+|++||+.++....... ....
T Consensus 58 ~i~v~~~~~~~~~--~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~----------~~~~ 125 (402)
T 2aq5_A 58 AFLVLPLGKTGRV--DKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLR----------EPVI 125 (402)
T ss_dssp CEEEEETTCCEEC--CTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBC----------SCSE
T ss_pred EEEEEECccCCCC--CCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccC----------CceE
Confidence 4455665433221 123346789999999999999 99999999999999999998764322111 1122
Q ss_pred EEeecCCeEEEEeecCccceeCCCc-cEEEEEeCCCCEEEEEcCCCeeeEEe--ecccccccccceEEEEECCCCcEEEE
Q 022019 114 LVVTEGESVYDFCWFPHMSASDPTS-CVFASTTRDHPIHLWDATTGLLRCTY--RAYDAVDEITAAFSVAFNPTGTKIFA 190 (304)
Q Consensus 114 ~~~~~~~~v~~~~~~~~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~--~~~~~~~~~~~v~~i~~~~~~~~l~~ 190 (304)
....|...|.+++| +|++ .+|++++.||.|++||+++++....+ ..+.. .|.+++|+|++++|++
T Consensus 126 ~~~~h~~~v~~~~~-------~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~ 193 (402)
T 2aq5_A 126 TLEGHTKRVGIVAW-------HPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPD-----TIYSVDWSRDGALICT 193 (402)
T ss_dssp EEECCSSCEEEEEE-------CSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCS-----CEEEEEECTTSSCEEE
T ss_pred EecCCCCeEEEEEE-------CcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCC-----ceEEEEECCCCCEEEE
Confidence 44567789999988 6676 69999999999999999999888777 44443 8999999999999996
Q ss_pred E-cCCeEEEEEcCCCCccceeeeeeeccccccccc-eeEEEeecCCCcEEEEE---ecCCeEEEEecCCceE-eEEec-c
Q 022019 191 G-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGI-MSAIAFSPTHTGMLAIG---SYSQTSAIYREDNMEL-LYVLH-G 263 (304)
Q Consensus 191 ~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~p~~~~~l~~~---~~dg~i~i~d~~~~~~-~~~~~-~ 263 (304)
+ .|+.|++||++... ....+. .+|... +.++.|+| ++.+|++| +.|+.|++||+++++. +.... .
T Consensus 194 ~~~d~~i~iwd~~~~~----~~~~~~---~~~~~~~~~~~~~~~-~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~ 265 (402)
T 2aq5_A 194 SCRDKRVRVIEPRKGT----VVAEKD---RPHEGTRPVHAVFVS-EGKILTTGFSRMSERQVALWDTKHLEEPLSLQELD 265 (402)
T ss_dssp EETTSEEEEEETTTTE----EEEEEE---CSSCSSSCCEEEECS-TTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECC
T ss_pred EecCCcEEEEeCCCCc----eeeeec---cCCCCCcceEEEEcC-CCcEEEEeccCCCCceEEEEcCccccCCceEEecc
Confidence 5 99999999998741 111111 344444 88999999 78899998 7899999999988654 33333 4
Q ss_pred ccCCeEEEEECCCCcEEEEeeccCCeEEEEeccccee
Q 022019 264 QEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQ 300 (304)
Q Consensus 264 ~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~ 300 (304)
|...+.+++|+|++.+|++++..||.|++||+.+++.
T Consensus 266 ~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~ 302 (402)
T 2aq5_A 266 TSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAP 302 (402)
T ss_dssp CCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTT
T ss_pred CCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCc
Confidence 6778999999999999975553799999999998763
No 49
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.4e-34 Score=235.85 Aligned_cols=208 Identities=16% Similarity=0.176 Sum_probs=161.9
Q ss_pred ecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCC--CccccccccccccCCccceEEEeecCCeEEEEeecCccce
Q 022019 56 SSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENG--ISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSA 133 (304)
Q Consensus 56 ~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 133 (304)
...|.++|++++|+|++++|++|+.||.|++||+.++. ... ....|...|.+++|
T Consensus 7 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~-----------------~~~~h~~~v~~~~~------ 63 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHAR-----------------TFSDHDKIVTCVDW------ 63 (377)
T ss_dssp EEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECC-----------------CBCCCSSCEEEEEE------
T ss_pred EecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEE-----------------EEecCCceEEEEEE------
Confidence 44577899999999999999999999999999997542 111 22346678999988
Q ss_pred eCCCccEEEEEeCCCCEEEEEcCCCe---eeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccce
Q 022019 134 SDPTSCVFASTTRDHPIHLWDATTGL---LRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFE 209 (304)
Q Consensus 134 ~~~~~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~ 209 (304)
+|++++|++++.|+.|++||+.+++ ....+..+. ..|.+++|+|++++|+++ .|+.|++||++.... ..
T Consensus 64 -s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~-~~ 136 (377)
T 3dwl_C 64 -APKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLN-----RAATFVRWSPNEDKFAVGSGARVISVCYFEQEND-WW 136 (377)
T ss_dssp -CTTTCCEEEEETTSSEEEC------CCCCEEECCCCS-----SCEEEEECCTTSSCCEEEESSSCEEECCC------CC
T ss_pred -eCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccC-----CceEEEEECCCCCEEEEEecCCeEEEEEECCccc-ce
Confidence 7789999999999999999999876 344444333 389999999999999965 999999999986421 11
Q ss_pred eeeeeeccccc-cccceeEEEeecCCCcEEEEEecCCeEEEEecC------------------CceEeEEeccccCCeEE
Q 022019 210 KYSTLKGNKEG-QAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED------------------NMELLYVLHGQEGGVTH 270 (304)
Q Consensus 210 ~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~------------------~~~~~~~~~~~~~~v~~ 270 (304)
....+ .. |...|.+++|+| ++.+|++|+.|+.|++||++ .++++..+ +|...|++
T Consensus 137 ~~~~~----~~~h~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~ 210 (377)
T 3dwl_C 137 VSKHL----KRPLRSTILSLDWHP-NNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHA 210 (377)
T ss_dssp CCEEE----CSSCCSCEEEEEECT-TSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEE
T ss_pred eeeEe----ecccCCCeEEEEEcC-CCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEE
Confidence 11222 33 888999999999 77899999999999999985 46677777 89999999
Q ss_pred EEECCCCcEEEEeeccCCeEEEEeccccee
Q 022019 271 VQFSRDGNYLYTGGRKDPYILCWDLRKAVQ 300 (304)
Q Consensus 271 ~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~ 300 (304)
++|+|+|++|++++ .||.|++||+++++.
T Consensus 211 ~~~sp~~~~l~~~~-~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 211 VGFSPSGNALAYAG-HDSSVTIAYPSAPEQ 239 (377)
T ss_dssp EEECTTSSCEEEEE-TTTEEC-CEECSTTS
T ss_pred EEECCCCCEEEEEe-CCCcEEEEECCCCCC
Confidence 99999999999999 999999999998865
No 50
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-33 Score=239.00 Aligned_cols=214 Identities=12% Similarity=0.091 Sum_probs=164.7
Q ss_pred eecCCCCceeEEEEcCC------CCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeec
Q 022019 55 TSSIPNNFLKGIKWSPD------GSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWF 128 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~------~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 128 (304)
.+.+|.+.|.+++|+|+ +.+||+++.||+|+|||+.++........ ...........|...|.+++|.
T Consensus 202 ~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~------~~~~p~~~l~~h~~~v~sv~~s 275 (524)
T 2j04_B 202 TIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFK------MCEKPSLTLSLADSLITTFDFL 275 (524)
T ss_dssp EEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEE------CCCSCSEEECCTTTCEEEEEES
T ss_pred EEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccce------eecCceEEEEcCCCCEEEEEec
Confidence 46678899999999996 57999999999999999986542110000 0000112334567889999984
Q ss_pred CccceeCCCccEEEEEeCCCCEEEEEcCCCe-eeEEeecccccccccceEEE--EECCCC-cEEEE-EcCCeEEEEEcCC
Q 022019 129 PHMSASDPTSCVFASTTRDHPIHLWDATTGL-LRCTYRAYDAVDEITAAFSV--AFNPTG-TKIFA-GYNKSVRVFDVHR 203 (304)
Q Consensus 129 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~~~~~v~~i--~~~~~~-~~l~~-~~d~~i~v~d~~~ 203 (304)
++ ..|++|+.||+|++||++++. +...+..|.. .|.++ .|+|++ .+|++ +.|++|+|||++.
T Consensus 276 -------~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~-----~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~ 342 (524)
T 2j04_B 276 -------SP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDS-----YILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKD 342 (524)
T ss_dssp -------SS-SEEEEEETTSEEEEEETTBCSSCSEEEECSSS-----CEEEEEEECCTTSCCEEEEEETTSEEEEECGGG
T ss_pred -------CC-CeEEEEeCCCEEEEEECCCCCCceEEeecccc-----cEEEEEEEcCCCCCeEEEEeccCCeEEEEECCC
Confidence 33 379999999999999998764 3344555544 89999 578887 78885 4999999999976
Q ss_pred CCccceeeeeeeccccccc--cceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEE
Q 022019 204 PGRDFEKYSTLKGNKEGQA--GIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLY 281 (304)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~--~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 281 (304)
... . ..+ .+|. ..+.+++|+| ++..+++++.|+.|++||++++.++.++.+|.+.|++++|+|+|++|+
T Consensus 343 ~~~-~---~~~----~~~~~~~~v~~v~fsp-~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~ 413 (524)
T 2j04_B 343 IAT-T---KTT----VSRFRGSNLVPVVYCP-QIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVL 413 (524)
T ss_dssp HHH-H---CEE----EEECSCCSCCCEEEET-TTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCE
T ss_pred CCc-c---ccc----ccccccCcccceEeCC-CcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEE
Confidence 311 1 111 2222 2478999999 677899999999999999999988888999999999999999999999
Q ss_pred EeeccCCeEEEEeccc
Q 022019 282 TGGRKDPYILCWDLRK 297 (304)
Q Consensus 282 ~~~~~d~~i~vwd~~~ 297 (304)
+|+ .||+|++||+..
T Consensus 414 Sgs-~Dgtv~lwd~~~ 428 (524)
T 2j04_B 414 AGS-ADGSLIITNAAR 428 (524)
T ss_dssp EEE-TTTEEECCBSCS
T ss_pred EEE-CCCEEEEEechH
Confidence 999 999999999854
No 51
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7e-33 Score=230.00 Aligned_cols=241 Identities=12% Similarity=0.183 Sum_probs=185.6
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcCC-CCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceE
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPD-GSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEAS 113 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~-~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (304)
.+..|++...... .+....+.+|.+.|++++|+|+ +.+|++++.||.|++||+.+.......... ....
T Consensus 90 ~v~vw~~~~~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~--------~~~~ 159 (416)
T 2pm9_A 90 SLELYSTNEANNA--INSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTP--------LTPG 159 (416)
T ss_dssp CEEEECCSSTTSC--CCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCC--------BCCC
T ss_pred eEEEeeccccccc--ccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccc--------cccc
Confidence 3455665542111 1234477899999999999998 899999999999999999876521100000 0000
Q ss_pred EEeecCCeEEEEeecCccceeCCC-ccEEEEEeCCCCEEEEEcCCCeeeEEeecccc-cccccceEEEEECCCC-cEEEE
Q 022019 114 LVVTEGESVYDFCWFPHMSASDPT-SCVFASTTRDHPIHLWDATTGLLRCTYRAYDA-VDEITAAFSVAFNPTG-TKIFA 190 (304)
Q Consensus 114 ~~~~~~~~v~~~~~~~~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~~~~~~v~~i~~~~~~-~~l~~ 190 (304)
....+...+.+++| +|+ +.+|++++.||.|++||+++++....+..+.. ..+...|.+++|+|++ .++++
T Consensus 160 ~~~~~~~~v~~~~~-------~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 232 (416)
T 2pm9_A 160 QSMSSVDEVISLAW-------NQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVAT 232 (416)
T ss_dssp CSCCSSCCCCEEEE-------CSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEE
T ss_pred cccCCCCCeeEEEe-------CCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEE
Confidence 11245567888887 566 78999999999999999999988887776521 1113489999999997 57775
Q ss_pred E-cCC---eEEEEEcCCCCccceeeeeeecccc-ccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEecccc
Q 022019 191 G-YNK---SVRVFDVHRPGRDFEKYSTLKGNKE-GQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQE 265 (304)
Q Consensus 191 ~-~d~---~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 265 (304)
+ .|+ .|++||++....... ... +|...|.+++|+|+++.+|++++.||.|++||+++++++..+.+|.
T Consensus 233 ~~~d~~~~~i~~~d~~~~~~~~~-------~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~ 305 (416)
T 2pm9_A 233 ATGSDNDPSILIWDLRNANTPLQ-------TLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARG 305 (416)
T ss_dssp EECCSSSCCCCEEETTSTTSCSB-------CCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSS
T ss_pred EECCCCCceEEEEeCCCCCCCcE-------EeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCC
Confidence 5 777 999999987432221 224 6888899999999677899999999999999999999999999999
Q ss_pred CCeEEEEECCCC-cEEEEeeccCCeEEEEeccccee
Q 022019 266 GGVTHVQFSRDG-NYLYTGGRKDPYILCWDLRKAVQ 300 (304)
Q Consensus 266 ~~v~~~~~~~~~-~~l~~~~~~d~~i~vwd~~~~~~ 300 (304)
..|.+++|+|++ .+|++++ .|+.|++||+.+++.
T Consensus 306 ~~v~~~~~s~~~~~~l~s~~-~d~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 306 NWCFKTKFAPEAPDLFACAS-FDNKIEVQTLQNLTN 340 (416)
T ss_dssp SCCCCEEECTTCTTEEEECC-SSSEEEEEESCCCCC
T ss_pred CceEEEEECCCCCCEEEEEe-cCCcEEEEEccCCCC
Confidence 999999999999 8999999 999999999988754
No 52
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.2e-32 Score=242.81 Aligned_cols=228 Identities=21% Similarity=0.310 Sum_probs=177.9
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEE
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (304)
.+..|++....... ....+.+.+|.+.|.+++|+|++++|++|+.||+|+|||+.++.. ...
T Consensus 406 ~i~~W~~~~~~~~~-~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~-----------------~~~ 467 (694)
T 3dm0_A 406 SIILWKLTKDDKAY-GVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVS-----------------TRR 467 (694)
T ss_dssp EEEEEECCCSTTCS-CEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE-----------------EEE
T ss_pred cEEEEEccCCCccc-ccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcc-----------------eeE
Confidence 34455554332211 122346889999999999999999999999999999999975432 123
Q ss_pred EeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCC--cEEEE-E
Q 022019 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTG--TKIFA-G 191 (304)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~--~~l~~-~ 191 (304)
...|...|.+++| +|++++|++++.|++|++||+........... ...|...|.+++|+|++ ..+++ +
T Consensus 468 ~~~h~~~v~~~~~-------s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~--~~~h~~~v~~~~~~~~~~~~~l~s~s 538 (694)
T 3dm0_A 468 FVGHTKDVLSVAF-------SLDNRQIVSASRDRTIKLWNTLGECKYTISEG--GEGHRDWVSCVRFSPNTLQPTIVSAS 538 (694)
T ss_dssp EECCSSCEEEEEE-------CTTSSCEEEEETTSCEEEECTTSCEEEEECSS--TTSCSSCEEEEEECSCSSSCEEEEEE
T ss_pred EeCCCCCEEEEEE-------eCCCCEEEEEeCCCEEEEEECCCCcceeeccC--CCCCCCcEEEEEEeCCCCcceEEEEe
Confidence 4567788999988 77899999999999999999875543322221 12345589999999986 46775 4
Q ss_pred cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEE
Q 022019 192 YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHV 271 (304)
Q Consensus 192 ~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~ 271 (304)
.|+.|++||++.. .......+|...|++++|+| ++.+|++|+.||.|++||+++++++..+.. ...|.++
T Consensus 539 ~d~~v~vwd~~~~--------~~~~~~~~h~~~v~~v~~sp-dg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~-~~~v~~~ 608 (694)
T 3dm0_A 539 WDKTVKVWNLSNC--------KLRSTLAGHTGYVSTVAVSP-DGSLCASGGKDGVVLLWDLAEGKKLYSLEA-NSVIHAL 608 (694)
T ss_dssp TTSCEEEEETTTC--------CEEEEECCCSSCEEEEEECT-TSSEEEEEETTSBCEEEETTTTEEEECCBC-SSCEEEE
T ss_pred CCCeEEEEECCCC--------cEEEEEcCCCCCEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCceEEEecC-CCcEEEE
Confidence 9999999999863 12223367889999999999 788999999999999999999999888874 5679999
Q ss_pred EECCCCcEEEEeeccCCeEEEEecccceee
Q 022019 272 QFSRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 272 ~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
+|+|++.+|++++ ++.|++||+++++.+
T Consensus 609 ~~sp~~~~l~~~~--~~~i~iwd~~~~~~~ 636 (694)
T 3dm0_A 609 CFSPNRYWLCAAT--EHGIKIWDLESKSIV 636 (694)
T ss_dssp EECSSSSEEEEEE--TTEEEEEETTTTEEE
T ss_pred EEcCCCcEEEEEc--CCCEEEEECCCCCCh
Confidence 9999999888766 677999999988654
No 53
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.9e-32 Score=222.79 Aligned_cols=236 Identities=12% Similarity=0.169 Sum_probs=174.6
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEE------cCCCCeEEEecCCCeEEEeeCCCCCC-ccccccccccccC
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKW------SPDGSSFLTSSEDKTLRIFSLPENGI-SYDVNACSLAKDQ 107 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~------s~~~~~l~s~~~dg~v~vwd~~~~~~-~~~~~~~~~~~~~ 107 (304)
.+..|++..... ....+.+|.+.|.+++| +|++++|++++.||.|++||+.++.. ........
T Consensus 91 ~i~iwd~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~----- 160 (357)
T 3i2n_A 91 NLHIWNLEAPEM-----PVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQ----- 160 (357)
T ss_dssp CEEEECTTSCSS-----CSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCT-----
T ss_pred eEEEEeCCCCCc-----cEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccC-----
Confidence 455666665541 23367799999999955 68999999999999999999986642 11111100
Q ss_pred CccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECC---C
Q 022019 108 DSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNP---T 184 (304)
Q Consensus 108 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~---~ 184 (304)
......+.++.|.+ +++|+++++++++.||.|++||+++++...... +. ..|.+++|+| +
T Consensus 161 --------~~~~~~v~~~~~~~---~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~-----~~v~~~~~~~~~~~ 223 (357)
T 3i2n_A 161 --------GENKRDCWTVAFGN---AYNQEERVVCAGYDNGDIKLFDLRNMALRWETN-IK-----NGVCSLEFDRKDIS 223 (357)
T ss_dssp --------TSCCCCEEEEEEEC---CCC-CCCEEEEEETTSEEEEEETTTTEEEEEEE-CS-----SCEEEEEESCSSSS
T ss_pred --------CCCCCceEEEEEEe---ccCCCCCEEEEEccCCeEEEEECccCceeeecC-CC-----CceEEEEcCCCCCC
Confidence 00123677777643 358899999999999999999999988754432 22 3899999999 8
Q ss_pred CcEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCc--------
Q 022019 185 GTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM-------- 255 (304)
Q Consensus 185 ~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~-------- 255 (304)
+.+++++ .|+.|++||++.... ...+... ...+|...|.+++|+|++..+|++|+.||.|++||++.+
T Consensus 224 ~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 300 (357)
T 3i2n_A 224 MNKLVATSLEGKFHVFDMRTQHP-TKGFASV--SEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDS 300 (357)
T ss_dssp CCEEEEEESTTEEEEEEEEEEET-TTEEEEE--EEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCT
T ss_pred CCEEEEECCCCeEEEEeCcCCCc-ccceeee--ccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccC
Confidence 9999965 999999999976321 1111100 123688899999999944448999999999999998743
Q ss_pred -----------eEeEEeccccCCeEEEEECCCCcEEE-EeeccCCeEEEEecccceee
Q 022019 256 -----------ELLYVLHGQEGGVTHVQFSRDGNYLY-TGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 256 -----------~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~d~~i~vwd~~~~~~~ 301 (304)
+++..+.+|...|++++|+|+|++|+ +++ .||.|++||+.+.+.+
T Consensus 301 ~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~-~d~~i~iw~~~~~~~i 357 (357)
T 3i2n_A 301 EGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSS-FDQTVRVLIVTKLNKI 357 (357)
T ss_dssp TSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEE-TTSEEEEEEECC----
T ss_pred CCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEec-CCCcEEEEECCCcccC
Confidence 46778889999999999999999998 788 9999999999887653
No 54
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=2.3e-32 Score=227.86 Aligned_cols=219 Identities=17% Similarity=0.312 Sum_probs=174.4
Q ss_pred ceeeeecCCCCceeEEEEcCCCC-eEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecC
Q 022019 51 NQFRTSSIPNNFLKGIKWSPDGS-SFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFP 129 (304)
Q Consensus 51 ~~~~~~~~h~~~V~~i~~s~~~~-~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 129 (304)
.....+.+|.+.|++++|+|++. +|++|+.||.|++|++.......... ........|...|.+++|.|
T Consensus 172 ~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~----------~~~~~~~~h~~~v~~v~~~p 241 (430)
T 2xyi_A 172 QPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVI----------DAKNIFTGHTAVVEDVAWHL 241 (430)
T ss_dssp CCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEE----------ECSEEECCCSSCEEEEEECS
T ss_pred CCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCcee----------ccceeecCCCCCEeeeEEeC
Confidence 34557789999999999999988 99999999999999998643211100 00123346778899999844
Q ss_pred ccceeCCCccEEEEEeCCCCEEEEEcCCC---eeeEEeecccccccccceEEEEECCCCc-EEEEE-cCCeEEEEEcCCC
Q 022019 130 HMSASDPTSCVFASTTRDHPIHLWDATTG---LLRCTYRAYDAVDEITAAFSVAFNPTGT-KIFAG-YNKSVRVFDVHRP 204 (304)
Q Consensus 130 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~~~-~d~~i~v~d~~~~ 204 (304)
. ++.+|++++.||.|++||++++ +....+..+.. .|.+++|+|++. ++++| .||.|++||++..
T Consensus 242 ~------~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~-----~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~ 310 (430)
T 2xyi_A 242 L------HESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTA-----EVNCLSFNPYSEFILATGSADKTVALWDLRNL 310 (430)
T ss_dssp S------CTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSS-----CEEEEEECSSCTTEEEEEETTSEEEEEETTCT
T ss_pred C------CCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCC-----CeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCC
Confidence 2 6779999999999999999976 45555554443 899999999987 56655 9999999999874
Q ss_pred CccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCC--------------ceEeEEeccccCCeEE
Q 022019 205 GRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN--------------MELLYVLHGQEGGVTH 270 (304)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~--------------~~~~~~~~~~~~~v~~ 270 (304)
...... ...|...|.+++|+|++..+|++++.||.|+|||+.. ..++..+.+|...|++
T Consensus 311 ~~~~~~-------~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 383 (430)
T 2xyi_A 311 KLKLHS-------FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD 383 (430)
T ss_dssp TSCSEE-------EECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEE
T ss_pred CCCeEE-------eecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceE
Confidence 332222 2457888999999996667899999999999999986 3677788899999999
Q ss_pred EEECCCCc-EEEEeeccCCeEEEEecccc
Q 022019 271 VQFSRDGN-YLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 271 ~~~~~~~~-~l~~~~~~d~~i~vwd~~~~ 298 (304)
++|+|+++ +|++++ .||.|++|++.+.
T Consensus 384 ~~~~p~~~~~l~s~s-~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 384 FSWNPNEPWIICSVS-EDNIMQVWQMAEN 411 (430)
T ss_dssp EEECSSSTTEEEEEE-TTSEEEEEEECHH
T ss_pred EEECCCCCCEEEEEE-CCCCEEEeEcccc
Confidence 99999999 888998 9999999999764
No 55
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=3.5e-32 Score=222.48 Aligned_cols=216 Identities=18% Similarity=0.211 Sum_probs=176.4
Q ss_pred eecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
.+..|.++|++++|+|++++|++++.||.|++||+.+++. ........|...|.+++|
T Consensus 3 ~~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~---------------~~~~~~~~h~~~v~~~~~------- 60 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKW---------------VQVHELKEHNGQVTGVDW------- 60 (372)
T ss_dssp EEESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEE---------------EEEEEEECCSSCEEEEEE-------
T ss_pred eecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcE---------------EeeeeecCCCCcccEEEE-------
Confidence 3456999999999999999999999999999999875421 011233456788999988
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeee
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYST 213 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~ 213 (304)
+|++++|++++.||.|++||+.+++........ .+...|.+++|+|++++++++ .|+.|++||++.... .. .
T Consensus 61 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~-~~---~ 133 (372)
T 1k8k_C 61 APDSNRIVTCGTDRNAYVWTLKGRTWKPTLVIL---RINRAARCVRWAPNEKKFAVGSGSRVISICYFEQEND-WW---V 133 (372)
T ss_dssp ETTTTEEEEEETTSCEEEEEEETTEEEEEEECC---CCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTT-EE---E
T ss_pred eCCCCEEEEEcCCCeEEEEECCCCeeeeeEEee---cCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCc-ce---e
Confidence 668999999999999999999888765554322 223389999999999999965 999999999987432 11 1
Q ss_pred eeccccccccceeEEEeecCCCcEEEEEecCCeEEEEec------------------CCceEeEEeccccCCeEEEEECC
Q 022019 214 LKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRE------------------DNMELLYVLHGQEGGVTHVQFSR 275 (304)
Q Consensus 214 ~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~------------------~~~~~~~~~~~~~~~v~~~~~~~ 275 (304)
......+|...|.+++|+| ++.+|++++.||.|++||+ ..++++..+.+|...|.+++|+|
T Consensus 134 ~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 212 (372)
T 1k8k_C 134 CKHIKKPIRSTVLSLDWHP-NSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSA 212 (372)
T ss_dssp EEEECTTCCSCEEEEEECT-TSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECS
T ss_pred eeeeecccCCCeeEEEEcC-CCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECC
Confidence 1122256778899999999 7789999999999999995 46788889999999999999999
Q ss_pred CCcEEEEeeccCCeEEEEecccceee
Q 022019 276 DGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 276 ~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
++.+|++++ .||.|++||+++++.+
T Consensus 213 ~~~~l~~~~-~d~~i~i~d~~~~~~~ 237 (372)
T 1k8k_C 213 NGSRVAWVS-HDSTVCLADADKKMAV 237 (372)
T ss_dssp SSSEEEEEE-TTTEEEEEEGGGTTEE
T ss_pred CCCEEEEEe-CCCEEEEEECCCCcee
Confidence 999999999 9999999999988654
No 56
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.6e-33 Score=231.03 Aligned_cols=215 Identities=15% Similarity=0.204 Sum_probs=161.9
Q ss_pred eeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccc
Q 022019 53 FRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMS 132 (304)
Q Consensus 53 ~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 132 (304)
...+.+|.+.|++++|+|++++|++++.||+|++||+.++... ........|...|.+++|
T Consensus 48 ~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~--------------~~~~~~~~~~~~v~~~~~----- 108 (377)
T 3dwl_C 48 ARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTW--------------KQTLVLLRLNRAATFVRW----- 108 (377)
T ss_dssp CCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CC--------------CCEEECCCCSSCEEEEEC-----
T ss_pred EEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCce--------------eeeeEecccCCceEEEEE-----
Confidence 3467799999999999999999999999999999999865410 011123456688999988
Q ss_pred eeCCCccEEEEEeCCCCEEEEEcCCCee---eEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccc
Q 022019 133 ASDPTSCVFASTTRDHPIHLWDATTGLL---RCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDF 208 (304)
Q Consensus 133 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~ 208 (304)
+|++++|++++.|+.|++||+++++. ...+.. .+...|.+++|+|++++|+++ .|+.|++||++......
T Consensus 109 --~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~----~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 182 (377)
T 3dwl_C 109 --SPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKR----PLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDA 182 (377)
T ss_dssp --CTTSSCCEEEESSSCEEECCC-----CCCCEEECS----SCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-
T ss_pred --CCCCCEEEEEecCCeEEEEEECCcccceeeeEeec----ccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCC
Confidence 77899999999999999999998763 444543 123489999999999999965 99999999996422110
Q ss_pred e----------eeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceE----eEEeccccCCeEEEEEC
Q 022019 209 E----------KYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMEL----LYVLHGQEGGVTHVQFS 274 (304)
Q Consensus 209 ~----------~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~----~~~~~~~~~~v~~~~~~ 274 (304)
. ......... +|...|.+++|+| ++.+|++++.||.|++||+++++. +..+.+|...|.+++|+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s 260 (377)
T 3dwl_C 183 KPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSP-SGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWA 260 (377)
T ss_dssp CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECT-TSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEE
T ss_pred Cccccccccccchhhhhhcc-cCCceEEEEEECC-CCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEc
Confidence 0 112233333 7888999999999 777999999999999999998876 78888999999999999
Q ss_pred CCCcEEEEeeccCCeEEEEecc
Q 022019 275 RDGNYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 275 ~~~~~l~~~~~~d~~i~vwd~~ 296 (304)
|+|++|++++ .++.+ +|+..
T Consensus 261 ~~~~~l~~~~-~~~~~-~~~~~ 280 (377)
T 3dwl_C 261 NESAIVAAGY-NYSPI-LLQGN 280 (377)
T ss_dssp ETTEEEEEES-SSSEE-EECCC
T ss_pred CCCCEEEEEc-CCcEE-EEEeC
Confidence 9999999887 66655 67665
No 57
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=6.1e-33 Score=228.99 Aligned_cols=244 Identities=16% Similarity=0.179 Sum_probs=181.3
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcCC----C---CeEEEecCCCeEEEeeCCCCCCccccccccccccC
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPD----G---SSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQ 107 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~----~---~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~ 107 (304)
.+..|+.........+.....+.+|...|++++|+|+ + .+|++++.||.|++||+.++.....
T Consensus 37 ~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~---------- 106 (397)
T 1sq9_A 37 YLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKK---------- 106 (397)
T ss_dssp EEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCC----------
T ss_pred EEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCccccc----------
Confidence 3455666555433333445577899999999999999 9 9999999999999999876543100
Q ss_pred CccceEEEeec-----CCeEEEEeecCccceeCCCccE-EEEEeCCCCEEEEEcCC------CeeeE-----Eeec--cc
Q 022019 108 DSYEASLVVTE-----GESVYDFCWFPHMSASDPTSCV-FASTTRDHPIHLWDATT------GLLRC-----TYRA--YD 168 (304)
Q Consensus 108 ~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~~~~~-l~~~~~dg~i~i~d~~~------~~~~~-----~~~~--~~ 168 (304)
........+ ...|.+++|.+.. .|++.+ |++++.||.|++||+.+ ++... .+.. ..
T Consensus 107 --~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (397)
T 1sq9_A 107 --VIFEKLDLLDSDMKKHSFWALKWGASN---DRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVES 181 (397)
T ss_dssp --EEEEEECCSCTTGGGSCEEEEEEECCC-------CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECC
T ss_pred --ccceeecccccccCCCcEEEEEEeecc---CCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeecc
Confidence 001122233 3788999884110 068889 99999999999999988 55544 4432 00
Q ss_pred ccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeecccccc---ccceeEEEeecCCCcEEEEEecC
Q 022019 169 AVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQ---AGIMSAIAFSPTHTGMLAIGSYS 244 (304)
Q Consensus 169 ~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~~p~~~~~l~~~~~d 244 (304)
...+...|.+++|+|++ +++++ .|+.|++||++.. .....+.. ..+| ...+.+++|+| ++.+|++++.|
T Consensus 182 ~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~----~~~~~~~~-~~~h~~~~~~i~~i~~~~-~~~~l~~~~~d 254 (397)
T 1sq9_A 182 PMTPSQFATSVDISERG-LIATGFNNGTVQISELSTL----RPLYNFES-QHSMINNSNSIRSVKFSP-QGSLLAIAHDS 254 (397)
T ss_dssp SSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTT----EEEEEEEC-CC---CCCCCEEEEEECS-STTEEEEEEEE
T ss_pred ccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCC----ceeEEEec-cccccccCCccceEEECC-CCCEEEEEecC
Confidence 01223489999999999 88866 9999999999863 11122211 0126 78899999999 67899999999
Q ss_pred ---CeEEEEecCCceEeEEecc-------------ccCCeEEEEECCCCcEEEEeeccCCeEEEEecccceee
Q 022019 245 ---QTSAIYREDNMELLYVLHG-------------QEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 245 ---g~i~i~d~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
|.|++||+++++++..+.+ |...|.+++|+|++++|++++ .||.|++||+++++.+
T Consensus 255 ~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~ 326 (397)
T 1sq9_A 255 NSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAG-WDGKLRFWDVKTKERI 326 (397)
T ss_dssp TTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEE-TTSEEEEEETTTTEEE
T ss_pred CCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEe-CCCeEEEEEcCCCcee
Confidence 9999999999999999998 999999999999999999999 9999999999988765
No 58
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.6e-31 Score=214.27 Aligned_cols=227 Identities=20% Similarity=0.345 Sum_probs=181.5
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEE
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (304)
.+..|+............+ ...+|...|.+++|+|++++|++++.||.|++||+.++.. .....
T Consensus 73 ~i~iw~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~---------------~~~~~ 136 (337)
T 1gxr_A 73 CVKVWDISHPGNKSPVSQL-DCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTP---------------RIKAE 136 (337)
T ss_dssp EEEEEETTSTTCCSCSEEE-ECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC-----------------EEEEE
T ss_pred eEEEEECCCCCceeeeecc-cccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCc---------------ceeee
Confidence 3556666654433221111 2237999999999999999999999999999999985431 11123
Q ss_pred EeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cC
Q 022019 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YN 193 (304)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d 193 (304)
...+...+.+++| +|+++++++++.||.|++||+++++....+..+.. .+.+++|+|++++++++ .|
T Consensus 137 ~~~~~~~i~~~~~-------~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~-----~i~~~~~~~~~~~l~~~~~d 204 (337)
T 1gxr_A 137 LTSSAPACYALAI-------SPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD-----GASCIDISNDGTKLWTGGLD 204 (337)
T ss_dssp EECSSSCEEEEEE-------CTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS-----CEEEEEECTTSSEEEEEETT
T ss_pred cccCCCceEEEEE-------CCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccC-----ceEEEEECCCCCEEEEEecC
Confidence 3446677888888 77899999999999999999999988887776554 89999999999999965 99
Q ss_pred CeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEE
Q 022019 194 KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQF 273 (304)
Q Consensus 194 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~ 273 (304)
+.|++||++... .... ..+...+.+++|+| ++.++++++.++.|++||+++++.. .+..|...|.+++|
T Consensus 205 g~i~~~d~~~~~----~~~~-----~~~~~~v~~~~~s~-~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~v~~~~~ 273 (337)
T 1gxr_A 205 NTVRSWDLREGR----QLQQ-----HDFTSQIFSLGYCP-TGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCVLSLKF 273 (337)
T ss_dssp SEEEEEETTTTE----EEEE-----EECSSCEEEEEECT-TSSEEEEEETTSCEEEEETTSSCEE-EECCCSSCEEEEEE
T ss_pred CcEEEEECCCCc----eEee-----ecCCCceEEEEECC-CCCEEEEEcCCCcEEEEECCCCCeE-EEcCCccceeEEEE
Confidence 999999998641 1111 12456799999999 7789999999999999999887754 56789999999999
Q ss_pred CCCCcEEEEeeccCCeEEEEecccceee
Q 022019 274 SRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 274 ~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
+|++++|++++ .||.|++||+.+++.+
T Consensus 274 ~~~~~~l~~~~-~dg~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 274 AYCGKWFVSTG-KDNLLNAWRTPYGASI 300 (337)
T ss_dssp CTTSSEEEEEE-TTSEEEEEETTTCCEE
T ss_pred CCCCCEEEEec-CCCcEEEEECCCCeEE
Confidence 99999999999 9999999999988765
No 59
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-32 Score=223.22 Aligned_cols=214 Identities=18% Similarity=0.252 Sum_probs=170.2
Q ss_pred eeeecCCCCceeEEEEcCC--CCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCc
Q 022019 53 FRTSSIPNNFLKGIKWSPD--GSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPH 130 (304)
Q Consensus 53 ~~~~~~h~~~V~~i~~s~~--~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 130 (304)
...+.+|.+.|++++|+|+ +.+|++|+.||.|++||+.++.. ........+...+.+++|
T Consensus 48 ~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~---------------~~~~~~~~~~~~v~~~~~--- 109 (379)
T 3jrp_A 48 IDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRW---------------SQIAVHAVHSASVNSVQW--- 109 (379)
T ss_dssp EEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEE---------------EEEEEECCCSSCEEEEEE---
T ss_pred eeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCce---------------eEeeeecCCCcceEEEEe---
Confidence 4477899999999999987 99999999999999999875421 011233346688999988
Q ss_pred cceeCCC--ccEEEEEeCCCCEEEEEcCCCeeeE--EeecccccccccceEEEEECC-------------CCcEEEEE-c
Q 022019 131 MSASDPT--SCVFASTTRDHPIHLWDATTGLLRC--TYRAYDAVDEITAAFSVAFNP-------------TGTKIFAG-Y 192 (304)
Q Consensus 131 ~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~--~~~~~~~~~~~~~v~~i~~~~-------------~~~~l~~~-~ 192 (304)
+|+ +.+|++++.||.|++||++++.... .+..+. ..|.+++|+| ++.+++++ .
T Consensus 110 ----~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 180 (379)
T 3jrp_A 110 ----APHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHA-----IGVNSASWAPATIEEDGEHNGTKESRKFVTGGA 180 (379)
T ss_dssp ----CCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCT-----TCEEEEEECCCC----------CTTCEEEEEET
T ss_pred ----CCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCC-----CceEEEEEcCccccccccccCCCCCCEEEEEeC
Confidence 556 8899999999999999998874332 333333 3899999999 68888865 9
Q ss_pred CCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCC--CcEEEEEecCCeEEEEecCCce-----EeEEecccc
Q 022019 193 NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTH--TGMLAIGSYSQTSAIYREDNME-----LLYVLHGQE 265 (304)
Q Consensus 193 d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~--~~~l~~~~~dg~i~i~d~~~~~-----~~~~~~~~~ 265 (304)
|+.|++||++........ .....+|...|.+++|+|++ +.+|++++.||.|++||++.+. .+.....|.
T Consensus 181 dg~i~i~d~~~~~~~~~~----~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 256 (379)
T 3jrp_A 181 DNLVKIWKYNSDAQTYVL----ESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFP 256 (379)
T ss_dssp TSCEEEEEEETTTTEEEE----EEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCS
T ss_pred CCeEEEEEecCCCcceee----EEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCC
Confidence 999999999875433222 22336788899999999943 8899999999999999998863 223333588
Q ss_pred CCeEEEEECCCCcEEEEeeccCCeEEEEecccc
Q 022019 266 GGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 266 ~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~ 298 (304)
..|++++|+|+|++|++++ .||.|++|+++.+
T Consensus 257 ~~v~~~~~s~~g~~l~~~~-~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 257 DVLWRASWSLSGNVLALSG-GDNKVTLWKENLE 288 (379)
T ss_dssp SCEEEEEECSSSCCEEEEE-SSSSEEEEEEEET
T ss_pred CcEEEEEEcCCCCEEEEec-CCCcEEEEeCCCC
Confidence 8999999999999999999 8999999999854
No 60
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=4.8e-32 Score=225.33 Aligned_cols=225 Identities=16% Similarity=0.181 Sum_probs=175.1
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEE
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (304)
.+..|++..... ...+.+|.+.|++++|+|++++|++|+.||.|++||+.+++... .
T Consensus 120 ~i~iwd~~~~~~------~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~-----------------~ 176 (420)
T 3vl1_A 120 DIKVLDSNFNLQ------REIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPR-----------------T 176 (420)
T ss_dssp CEEEECTTSCEE------EEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCE-----------------E
T ss_pred CEEEEeCCCcce------eeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCce-----------------E
Confidence 345566554332 23567999999999999999999999999999999998654321 2
Q ss_pred EeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccc-------------------cccc
Q 022019 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVD-------------------EITA 175 (304)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~-------------------~~~~ 175 (304)
...|...|.+++| +|++++|++++.||.|++||+++++....+..+.... +...
T Consensus 177 ~~~h~~~v~~~~~-------~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 249 (420)
T 3vl1_A 177 LIGHRATVTDIAI-------IDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSK 249 (420)
T ss_dssp EECCSSCEEEEEE-------ETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCC
T ss_pred EcCCCCcEEEEEE-------cCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCc
Confidence 3457788999988 6689999999999999999999999888876543110 1124
Q ss_pred eEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCC
Q 022019 176 AFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN 254 (304)
Q Consensus 176 v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~ 254 (304)
+.+++|+|++++++++ .||.|++||++.... .......|...+.+++|+|++..+|++|+.||.|++||+++
T Consensus 250 v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~ 322 (420)
T 3vl1_A 250 KNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQ-------TIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRS 322 (420)
T ss_dssp CCTTCSSCTTEEEEEEETTSCEEEEETTTCCE-------EEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred ccceEEcCCCCEEEEEcCCCeEEEEECCCCce-------eEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCC
Confidence 5556668999999966 999999999987421 11112457788999999995444999999999999999998
Q ss_pred ce-EeEEecc-ccCCeEEEEECCCCcEEEEeeccCCeEEEEecccc
Q 022019 255 ME-LLYVLHG-QEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 255 ~~-~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~ 298 (304)
++ ++..+.+ |...|.++.| +++.+|++++ .|+.|++|++.++
T Consensus 323 ~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~-~d~~v~iw~~~~~ 366 (420)
T 3vl1_A 323 PECPVGEFLINEGTPINNVYF-AAGALFVSSG-FDTSIKLDIISDP 366 (420)
T ss_dssp TTSCSEEEEESTTSCEEEEEE-ETTEEEEEET-TTEEEEEEEECCT
T ss_pred CcCchhhhhccCCCCceEEEe-CCCCEEEEec-CCccEEEEeccCC
Confidence 74 4777776 5667888855 5788999999 9999999998773
No 61
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.3e-32 Score=225.57 Aligned_cols=215 Identities=13% Similarity=0.144 Sum_probs=169.9
Q ss_pred eeecCC-----CCceeEEEEc----CCCCe-EEEecCCCeEEEeeCCC------CCCccccccccccccCCccceEEE--
Q 022019 54 RTSSIP-----NNFLKGIKWS----PDGSS-FLTSSEDKTLRIFSLPE------NGISYDVNACSLAKDQDSYEASLV-- 115 (304)
Q Consensus 54 ~~~~~h-----~~~V~~i~~s----~~~~~-l~s~~~dg~v~vwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~-- 115 (304)
..+..| ...|.+++|+ |++.+ |++++.||.|++||+.+ ....... ....+.
T Consensus 110 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~-----------~~~~~~~~ 178 (397)
T 1sq9_A 110 EKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWS-----------PTLELQGT 178 (397)
T ss_dssp EEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCC-----------CEEEEEEE
T ss_pred eeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeecc-----------Ccceeeee
Confidence 466677 5999999999 99999 99999999999999986 3221100 000011
Q ss_pred ----eecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeec---ccccccccceEEEEECCCCcEE
Q 022019 116 ----VTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRA---YDAVDEITAAFSVAFNPTGTKI 188 (304)
Q Consensus 116 ----~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---~~~~~~~~~v~~i~~~~~~~~l 188 (304)
..+...+.+++| +|++ ++++++.||.|++||+++++....+.. +. .....|.+++|+|++++|
T Consensus 179 ~~~~~~~~~~i~~~~~-------~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~--~~~~~i~~i~~~~~~~~l 248 (397)
T 1sq9_A 179 VESPMTPSQFATSVDI-------SERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMI--NNSNSIRSVKFSPQGSLL 248 (397)
T ss_dssp ECCSSSSCCCCCEEEE-------CTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC-----CCCCCEEEEEECSSTTEE
T ss_pred eccccCCCCCceEEEE-------CCCc-eEEEEeCCCcEEEEECCCCceeEEEecccccc--ccCCccceEEECCCCCEE
Confidence 224567778877 7788 999999999999999999988888876 40 002389999999999999
Q ss_pred EEE-cC---CeEEEEEcCCCCccceeeeeeeccccc-------------cccceeEEEeecCCCcEEEEEecCCeEEEEe
Q 022019 189 FAG-YN---KSVRVFDVHRPGRDFEKYSTLKGNKEG-------------QAGIMSAIAFSPTHTGMLAIGSYSQTSAIYR 251 (304)
Q Consensus 189 ~~~-~d---~~i~v~d~~~~~~~~~~~~~~~~~~~~-------------~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d 251 (304)
+++ .| +.|++||++... ....+ .+ |...|.+++|+| ++.+|++++.||.|++||
T Consensus 249 ~~~~~d~~~g~i~i~d~~~~~----~~~~~----~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd 319 (397)
T 1sq9_A 249 AIAHDSNSFGCITLYETEFGE----RIGSL----SVPTHSSQASLGEFAHSSWVMSLSFND-SGETLCSAGWDGKLRFWD 319 (397)
T ss_dssp EEEEEETTEEEEEEEETTTCC----EEEEE----CBC--------CCBSBSSCEEEEEECS-SSSEEEEEETTSEEEEEE
T ss_pred EEEecCCCCceEEEEECCCCc----cccee----ccCcccccccccccccCCcEEEEEECC-CCCEEEEEeCCCeEEEEE
Confidence 965 88 999999998642 11222 33 788899999999 778999999999999999
Q ss_pred cCCceEeEEec------cc---------------cCCeEEEEECCCC----------cEEEEeeccCCeEEEEecccce
Q 022019 252 EDNMELLYVLH------GQ---------------EGGVTHVQFSRDG----------NYLYTGGRKDPYILCWDLRKAV 299 (304)
Q Consensus 252 ~~~~~~~~~~~------~~---------------~~~v~~~~~~~~~----------~~l~~~~~~d~~i~vwd~~~~~ 299 (304)
+++++++..+. +| ...|++++|+|+| .+|++++ .||.|++|++++|+
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~-~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 320 VKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVC-LDRSIRWFREAGGK 397 (397)
T ss_dssp TTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEE-TTTEEEEEEEEC--
T ss_pred cCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEec-CCCcEEEEEcCCCC
Confidence 99999999998 88 8999999999998 7999999 99999999999874
No 62
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.8e-31 Score=220.70 Aligned_cols=216 Identities=21% Similarity=0.325 Sum_probs=173.0
Q ss_pred cCCCCceeEEEEcC-CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeC
Q 022019 57 SIPNNFLKGIKWSP-DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASD 135 (304)
Q Consensus 57 ~~h~~~V~~i~~s~-~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 135 (304)
.+|...|.+++|+| ++.+|++++.||.|++||+.++... ....+...+..+.|.|. +
T Consensus 96 ~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~------------------~~~~~~~~~~~~~~~~~----~ 153 (408)
T 4a11_B 96 DVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTA------------------DVFNFEETVYSHHMSPV----S 153 (408)
T ss_dssp TCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEE------------------EEEECSSCEEEEEECSS----C
T ss_pred ccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccc------------------eeccCCCceeeeEeecC----C
Confidence 36999999999999 7889999999999999999865321 23345577888888664 5
Q ss_pred CCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCc-EEEEE-cCCeEEEEEcCCCCccceeee-
Q 022019 136 PTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGT-KIFAG-YNKSVRVFDVHRPGRDFEKYS- 212 (304)
Q Consensus 136 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~~~-~d~~i~v~d~~~~~~~~~~~~- 212 (304)
+++.++++++.||.|++||+++++....+..+.. .|.+++|+|++. +++++ .||.|++||++........+.
T Consensus 154 ~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~ 228 (408)
T 4a11_B 154 TKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQ-----EILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQ 228 (408)
T ss_dssp SSCCEEEEEESSSSEEEEESSSSCCCEEECCCCS-----CEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCT
T ss_pred CCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCC-----cEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccc
Confidence 5777999999999999999999988887776554 899999999998 46655 999999999987543332221
Q ss_pred -------eeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCc------------------------------
Q 022019 213 -------TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM------------------------------ 255 (304)
Q Consensus 213 -------~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~------------------------------ 255 (304)
........|...|.+++|+| ++.+|++++.||.|++||++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (408)
T 4a11_B 229 HNGKKSQAVESANTAHNGKVNGLCFTS-DGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEF 307 (408)
T ss_dssp TTTCSCCCTTTSSCSCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCE
T ss_pred cccccceeeccccccccCceeEEEEcC-CCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceE
Confidence 11222256788899999999 7889999999999999998653
Q ss_pred -----------------eEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEecccceee
Q 022019 256 -----------------ELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 256 -----------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
+++..+.+|...|++++|+|++++|++++ .||.|++||+++++.+
T Consensus 308 ~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~dg~i~iw~~~~~~~~ 369 (408)
T 4a11_B 308 VFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGS-RDCNILAWVPSLYEPV 369 (408)
T ss_dssp EEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEE-TTSCEEEEEECC----
T ss_pred EEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEEC-CCCeEEEEeCCCCCcc
Confidence 44566778999999999999999999999 9999999999988764
No 63
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-32 Score=229.62 Aligned_cols=222 Identities=17% Similarity=0.229 Sum_probs=170.6
Q ss_pred eeee-cCCCCceeEEEEcC-CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCc
Q 022019 53 FRTS-SIPNNFLKGIKWSP-DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPH 130 (304)
Q Consensus 53 ~~~~-~~h~~~V~~i~~s~-~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 130 (304)
+..+ .+|.+.|++++|+| ++++|++|+.||+|+|||+.+.... ..........|...|.+++|
T Consensus 55 ~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~------------~~~~~~~~~~h~~~v~~~~~--- 119 (437)
T 3gre_A 55 IATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVG------------EVYSSSLTYDCSSTVTQITM--- 119 (437)
T ss_dssp EEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTT------------CCCSCSEEEECSSCEEEEEE---
T ss_pred EeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccC------------cccceeeeccCCCCEEEEEE---
Confidence 3356 89999999999999 9999999999999999998641110 00111234467889999988
Q ss_pred cceeCCCccEEEEEeCCCCEEEEEcC---CCeeeEEeecccc-----cc--cccceEEEE--ECCCCcEEEEE-cCCeEE
Q 022019 131 MSASDPTSCVFASTTRDHPIHLWDAT---TGLLRCTYRAYDA-----VD--EITAAFSVA--FNPTGTKIFAG-YNKSVR 197 (304)
Q Consensus 131 ~~~~~~~~~~l~~~~~dg~i~i~d~~---~~~~~~~~~~~~~-----~~--~~~~v~~i~--~~~~~~~l~~~-~d~~i~ 197 (304)
+|++.+|++++.||.|++||+. +++.......+.. .. +...+.++. +++++.+++++ .|+.|+
T Consensus 120 ----~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~ 195 (437)
T 3gre_A 120 ----IPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVI 195 (437)
T ss_dssp ----CTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEE
T ss_pred ----eCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEE
Confidence 6789999999999999999995 4544433322110 00 223566666 66889999965 999999
Q ss_pred EEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEec-cccCCeEEEEEC--
Q 022019 198 VFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH-GQEGGVTHVQFS-- 274 (304)
Q Consensus 198 v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~-- 274 (304)
+||++... ....+.. ..|...|++++|+| ++.+|++|+.||.|++||+++++++..+. .|...|++++|+
T Consensus 196 iwd~~~~~----~~~~~~~--~~h~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 268 (437)
T 3gre_A 196 IFDIRTLE----RLQIIEN--SPRHGAVSSICIDE-ECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQF 268 (437)
T ss_dssp EEETTTCC----EEEEEEC--CGGGCCEEEEEECT-TSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTT
T ss_pred EEeCCCCe----eeEEEcc--CCCCCceEEEEECC-CCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccc
Confidence 99998742 1122211 12778899999999 78899999999999999999999999886 788899999655
Q ss_pred --CCCcEEEEeeccCCeEEEEecccceee
Q 022019 275 --RDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 275 --~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
|++.+|++++ .||.|++||+++++.+
T Consensus 269 ~s~~~~~l~s~~-~dg~i~iwd~~~~~~~ 296 (437)
T 3gre_A 269 YGKNSVIVVGGS-SKTFLTIWNFVKGHCQ 296 (437)
T ss_dssp TCTTEEEEEEES-TTEEEEEEETTTTEEE
T ss_pred cCCCccEEEEEc-CCCcEEEEEcCCCcEE
Confidence 5688999999 9999999999988754
No 64
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2.1e-32 Score=229.29 Aligned_cols=228 Identities=17% Similarity=0.246 Sum_probs=167.2
Q ss_pred CCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecC------------CeEEEE
Q 022019 58 IPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEG------------ESVYDF 125 (304)
Q Consensus 58 ~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~v~~~ 125 (304)
.|.+.|++++|+|+|++||+|+.||.|+|||+.++........ ...........|. ..|.++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~------~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l 99 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSR------GEYNVYSTFQSHEPEFDYLKSLEIEEKINKI 99 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCC------CCEEEEEEEECCCCEEEGGGTEEECCCCCEE
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccc------cceeEecccccccccccccccccccCceEEE
Confidence 4688999999999999999999999999999986542110000 0011122333454 668888
Q ss_pred eecCccceeCCCc--cEEEEEeCCCCEEEEEcCCCeeeEEe-e----------------------------------ccc
Q 022019 126 CWFPHMSASDPTS--CVFASTTRDHPIHLWDATTGLLRCTY-R----------------------------------AYD 168 (304)
Q Consensus 126 ~~~~~~~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~-~----------------------------------~~~ 168 (304)
+| +|++ ..|++++.|+.|++||+.++...... . ...
T Consensus 100 ~~-------~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (447)
T 3dw8_B 100 RW-------LPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIF 172 (447)
T ss_dssp EE-------CCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEE
T ss_pred EE-------cCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEe
Confidence 88 5566 78999999999999999764432110 0 000
Q ss_pred ccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEE
Q 022019 169 AVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSA 248 (304)
Q Consensus 169 ~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~ 248 (304)
...|...|.+++|+|++++|++|.|+.|++||++........+........+|...|.+++|+|++..+|++|+.||.|+
T Consensus 173 ~~~h~~~v~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~ 252 (447)
T 3dw8_B 173 ANAHTYHINSISINSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIR 252 (447)
T ss_dssp CSCCSSCCCEEEECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEE
T ss_pred ccCCCcceEEEEEcCCCCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEE
Confidence 11345589999999999999977999999999984322222111111234678889999999995448999999999999
Q ss_pred EEecCCceE----eEEeccccC------------CeEEEEECCCCcEEEEeeccCCeEEEEeccc-cee
Q 022019 249 IYREDNMEL----LYVLHGQEG------------GVTHVQFSRDGNYLYTGGRKDPYILCWDLRK-AVQ 300 (304)
Q Consensus 249 i~d~~~~~~----~~~~~~~~~------------~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~-~~~ 300 (304)
+||+++++. +..+.+|.. .|.+++|+|+|++|++++ . +.|++||+++ ++.
T Consensus 253 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~-~-~~v~iwd~~~~~~~ 319 (447)
T 3dw8_B 253 LCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRD-Y-LSVKVWDLNMENRP 319 (447)
T ss_dssp EEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEE-S-SEEEEEETTCCSSC
T ss_pred EEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEee-C-CeEEEEeCCCCccc
Confidence 999998886 788888876 899999999999999998 7 9999999987 543
No 65
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.3e-31 Score=221.41 Aligned_cols=220 Identities=16% Similarity=0.268 Sum_probs=176.5
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEE
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (304)
.+..|+......... ....|.+.|++++|+|++++|++|+.||.|++||+.++.... .
T Consensus 114 ~v~lw~~~~~~~~~~-----~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~-----------------~ 171 (401)
T 4aez_A 114 NVYVWNADSGSVSAL-----AETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLR-----------------T 171 (401)
T ss_dssp EEEEEETTTCCEEEE-----EECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE-----------------E
T ss_pred eEEEeeCCCCcEeEe-----eecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEE-----------------E
Confidence 455666665544331 223489999999999999999999999999999998653321 2
Q ss_pred EeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcC-CCeeeEEeecccccccccceEEEEECCCCcEEEEE-c
Q 022019 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDAT-TGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-Y 192 (304)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~ 192 (304)
...|...|.+++| ++.++++++.||.|++||++ .+.....+..+.. .|.+++|+|++++|+++ .
T Consensus 172 ~~~~~~~v~~~~~---------~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~s~~~ 237 (401)
T 4aez_A 172 MAGHQARVGCLSW---------NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSS-----EVCGLAWRSDGLQLASGGN 237 (401)
T ss_dssp ECCCSSCEEEEEE---------ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSS-----CEEEEEECTTSSEEEEEET
T ss_pred ecCCCCceEEEEE---------CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCC-----CeeEEEEcCCCCEEEEEeC
Confidence 3356688999988 45699999999999999998 4555666665554 89999999999999965 8
Q ss_pred CCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEe--cCCeEEEEecCCceEeEEeccccCCeEE
Q 022019 193 NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS--YSQTSAIYREDNMELLYVLHGQEGGVTH 270 (304)
Q Consensus 193 d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~v~~ 270 (304)
|+.|++||++... .......|...|.+++|+|++..++++|+ .|+.|++||+++++++..+. +...|.+
T Consensus 238 d~~v~iwd~~~~~--------~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~ 308 (401)
T 4aez_A 238 DNVVQIWDARSSI--------PKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTS 308 (401)
T ss_dssp TSCEEEEETTCSS--------EEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEE
T ss_pred CCeEEEccCCCCC--------ccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEE
Confidence 9999999998631 11122567888999999997778888876 79999999999999998886 6678999
Q ss_pred EEECCCCcEEEE--eeccCCeEEEEeccccee
Q 022019 271 VQFSRDGNYLYT--GGRKDPYILCWDLRKAVQ 300 (304)
Q Consensus 271 ~~~~~~~~~l~~--~~~~d~~i~vwd~~~~~~ 300 (304)
++|+|++++|++ |+ .||.|++||+.+++.
T Consensus 309 ~~~s~~~~~l~~~~g~-~dg~i~v~~~~~~~~ 339 (401)
T 4aez_A 309 LIWSPHSKEIMSTHGF-PDNNLSIWSYSSSGL 339 (401)
T ss_dssp EEECSSSSEEEEEECT-TTCEEEEEEEETTEE
T ss_pred EEECCCCCeEEEEeec-CCCcEEEEecCCccc
Confidence 999999999998 55 799999999998644
No 66
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=3.6e-31 Score=213.43 Aligned_cols=210 Identities=13% Similarity=0.208 Sum_probs=171.2
Q ss_pred ecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeC
Q 022019 56 SSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASD 135 (304)
Q Consensus 56 ~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 135 (304)
..+|.+.|++++|+|++++|++++ ||.|++||+.++........ .....+...+.+++| +
T Consensus 47 ~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~------------~~~~~~~~~v~~~~~-------~ 106 (337)
T 1gxr_A 47 TLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQ------------LDCLNRDNYIRSCKL-------L 106 (337)
T ss_dssp EECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEE------------EECSCTTSBEEEEEE-------C
T ss_pred eccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeec------------ccccCCCCcEEEEEE-------c
Confidence 347999999999999999999999 99999999986543211110 011146678999988 7
Q ss_pred CCccEEEEEeCCCCEEEEEcCCCe--eeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeee
Q 022019 136 PTSCVFASTTRDHPIHLWDATTGL--LRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYS 212 (304)
Q Consensus 136 ~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~ 212 (304)
|++++|++++.||.|++||+.+++ ....+..+. ..+.+++|+|++++++++ .|+.|++||++.. ..
T Consensus 107 ~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~----~~-- 175 (337)
T 1gxr_A 107 PDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSA-----PACYALAISPDSKVCFSCCSDGNIAVWDLHNQ----TL-- 175 (337)
T ss_dssp TTSSEEEEEESSSEEEEEECCCC--EEEEEEECSS-----SCEEEEEECTTSSEEEEEETTSCEEEEETTTT----EE--
T ss_pred CCCCEEEEEcCCCcEEEEECCCCCcceeeecccCC-----CceEEEEECCCCCEEEEEeCCCcEEEEeCCCC----ce--
Confidence 789999999999999999999877 334444433 389999999999999965 9999999999863 11
Q ss_pred eeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEE
Q 022019 213 TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILC 292 (304)
Q Consensus 213 ~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~v 292 (304)
......|...+.+++|+| ++.+|++++.||.|++||+++++.+..+. +...+.+++|+|++++|++++ .|+.|++
T Consensus 176 --~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~-~~~~i~~ 250 (337)
T 1gxr_A 176 --VRQFQGHTDGASCIDISN-DGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGM-ESSNVEV 250 (337)
T ss_dssp --EEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEE-TTSCEEE
T ss_pred --eeeeecccCceEEEEECC-CCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEc-CCCcEEE
Confidence 112256788899999999 77899999999999999999999888875 778899999999999999999 9999999
Q ss_pred Eecccceee
Q 022019 293 WDLRKAVQV 301 (304)
Q Consensus 293 wd~~~~~~~ 301 (304)
||+++++..
T Consensus 251 ~~~~~~~~~ 259 (337)
T 1gxr_A 251 LHVNKPDKY 259 (337)
T ss_dssp EETTSSCEE
T ss_pred EECCCCCeE
Confidence 999887543
No 67
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=3.8e-32 Score=225.93 Aligned_cols=223 Identities=12% Similarity=0.172 Sum_probs=173.8
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEE
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (304)
.+..|+........ .+..| ..+....|+|++++|++|+.||.|++||+.++.... .
T Consensus 79 ~v~i~d~~~~~~~~------~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~-----------------~ 134 (420)
T 3vl1_A 79 HDFLFNTIIRDGSK------MLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQRE-----------------I 134 (420)
T ss_dssp EEEEEECCSEETTT------TSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEE-----------------E
T ss_pred cEEEEEecccceee------EEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceee-----------------e
Confidence 34556655444332 23344 445566789999999999999999999987543211 1
Q ss_pred EeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cC
Q 022019 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YN 193 (304)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d 193 (304)
...|...|.+++| +|++++|++++.|+.|++||+.+++....+..+.. .|.+++|+|++++|+++ .|
T Consensus 135 ~~~h~~~v~~~~~-------~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~s~~~d 202 (420)
T 3vl1_A 135 DQAHVSEITKLKF-------FPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRA-----TVTDIAIIDRGRNVLSASLD 202 (420)
T ss_dssp TTSSSSCEEEEEE-------CTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSS-----CEEEEEEETTTTEEEEEETT
T ss_pred cccccCccEEEEE-------CCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCC-----cEEEEEEcCCCCEEEEEcCC
Confidence 2256688999988 77899999999999999999999988888876654 89999999999999965 99
Q ss_pred CeEEEEEcCCCCccceeeeeeeccccc---------------------cccceeEEEeecCCCcEEEEEecCCeEEEEec
Q 022019 194 KSVRVFDVHRPGRDFEKYSTLKGNKEG---------------------QAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRE 252 (304)
Q Consensus 194 ~~i~v~d~~~~~~~~~~~~~~~~~~~~---------------------~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~ 252 (304)
+.|++||+++.. ....+... .. +...+.+++|+| ++.+|++|+.||.|++||+
T Consensus 203 ~~v~iwd~~~~~----~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~i~d~ 276 (420)
T 3vl1_A 203 GTIRLWECGTGT----TIHTFNRK-ENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGT-YGKYVIAGHVSGVITVHNV 276 (420)
T ss_dssp SCEEEEETTTTE----EEEEECBT-TBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSC-TTEEEEEEETTSCEEEEET
T ss_pred CcEEEeECCCCc----eeEEeecC-CCCCCCccEEEEecCCcceeeecccCcccceEEcC-CCCEEEEEcCCCeEEEEEC
Confidence 999999998642 11222110 11 234456667788 7889999999999999999
Q ss_pred CCceEeEEec-cccCCeEEEEECCCCc-EEEEeeccCCeEEEEeccccee
Q 022019 253 DNMELLYVLH-GQEGGVTHVQFSRDGN-YLYTGGRKDPYILCWDLRKAVQ 300 (304)
Q Consensus 253 ~~~~~~~~~~-~~~~~v~~~~~~~~~~-~l~~~~~~d~~i~vwd~~~~~~ 300 (304)
++++.+..+. .|...|++++|+|++. +|++++ .||.|++||+++++.
T Consensus 277 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~-~dg~i~vwd~~~~~~ 325 (420)
T 3vl1_A 277 FSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGY-ENGMLAQWDLRSPEC 325 (420)
T ss_dssp TTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEE-TTSEEEEEETTCTTS
T ss_pred CCCceeEEcccccCCCceeEEEeCCCCCEEEEEe-CCCeEEEEEcCCCcC
Confidence 9988777765 5788999999999999 999999 999999999998754
No 68
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=9.3e-33 Score=225.23 Aligned_cols=232 Identities=17% Similarity=0.222 Sum_probs=174.9
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcC-CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceE
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSP-DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEAS 113 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~-~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (304)
.+..|++..... ...+.+|.+.|.+++|+| ++.+|++|+.||.|++||+.+++.......
T Consensus 96 ~i~v~d~~~~~~------~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~------------- 156 (366)
T 3k26_A 96 IIRIINPITMQC------IKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGG------------- 156 (366)
T ss_dssp EEEEECTTTCCE------EEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECS-------------
T ss_pred EEEEEEchhceE------eeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecc-------------
Confidence 455666665433 336778999999999999 999999999999999999986533211100
Q ss_pred EEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecc-----------------------ccc
Q 022019 114 LVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAY-----------------------DAV 170 (304)
Q Consensus 114 ~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-----------------------~~~ 170 (304)
...+...|.+++| +|++++|++++.||.|++||+++++....+... ...
T Consensus 157 -~~~~~~~v~~~~~-------~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (366)
T 3k26_A 157 -VEGHRDEVLSADY-------DLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRD 228 (366)
T ss_dssp -TTSCSSCEEEEEE-------CTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECS
T ss_pred -cccccCceeEEEE-------CCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCcccccc
Confidence 0246678999988 778999999999999999999876544332210 000
Q ss_pred ccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceee------eeeeccccccccceeEEEeecCC--CcEEEEE
Q 022019 171 DEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKY------STLKGNKEGQAGIMSAIAFSPTH--TGMLAIG 241 (304)
Q Consensus 171 ~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~------~~~~~~~~~~~~~v~~~~~~p~~--~~~l~~~ 241 (304)
.+...|.+++|+ +++++++ .|+.|++||++......... .........|...|.+++|+| + +.+|++|
T Consensus 229 ~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~~~l~~~ 305 (366)
T 3k26_A 229 IHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSM-DFWQKMLALG 305 (366)
T ss_dssp SCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEE-CTTSSEEEEE
T ss_pred CCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcC-CCCCcEEEEE
Confidence 144589999998 6678865 99999999998754311110 112223356777899999999 6 8899999
Q ss_pred ecCCeEEEEecCCce----EeEEeccc--cCCeEEEEECCCCcEEEEeeccCCeEEEEeccc
Q 022019 242 SYSQTSAIYREDNME----LLYVLHGQ--EGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 242 ~~dg~i~i~d~~~~~----~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~ 297 (304)
+.||.|++||+.+++ ....+.+| ...|++++|+|++++|++++ .||.|++||+.+
T Consensus 306 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~dg~i~iwd~~~ 366 (366)
T 3k26_A 306 NQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVC-DDASIWRWDRLR 366 (366)
T ss_dssp CTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEE-TTSEEEEEEC--
T ss_pred ecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEe-CCCEEEEEEecC
Confidence 999999999999875 44477777 78999999999999999999 999999999863
No 69
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2.2e-31 Score=230.08 Aligned_cols=203 Identities=25% Similarity=0.441 Sum_probs=170.6
Q ss_pred eeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccce
Q 022019 54 RTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSA 133 (304)
Q Consensus 54 ~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 133 (304)
..+.+|...|.+++|+|+|++|++++.||.|++||.... . ......|...|.+++|
T Consensus 338 ~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~-~-----------------~~~~~~~~~~v~~~~~------ 393 (577)
T 2ymu_A 338 QTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQ-L-----------------LQTLTGHSSSVRGVAF------ 393 (577)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTCC-E-----------------EEEEECCSSCEEEEEE------
T ss_pred EEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCCC-E-----------------EEEecCCCCCeEEEEE------
Confidence 467789999999999999999999999999999996421 1 1133456678888877
Q ss_pred eCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeee
Q 022019 134 SDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYS 212 (304)
Q Consensus 134 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~ 212 (304)
+|++++|++++.|+.|++||. +++....+..+.. .|.+++|+|++++|+++ .|+.|++||... ....
T Consensus 394 -s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~-----~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~-----~~~~ 461 (577)
T 2ymu_A 394 -SPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSS-----SVWGVAFSPDDQTIASASDDKTVKLWNRNG-----QLLQ 461 (577)
T ss_dssp -CTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSS-----CEEEEEECTTSSEEEEEETTSEEEEEETTS-----CEEE
T ss_pred -CCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCC-----CeEEEEECCCCCEEEEEcCCCEEEEEECCC-----CEEE
Confidence 789999999999999999995 5666666665554 89999999999999965 999999999743 1112
Q ss_pred eeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEE
Q 022019 213 TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILC 292 (304)
Q Consensus 213 ~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~v 292 (304)
. ..+|...|.+++|+| ++.+|++++.|+.|++||. +++++..+.+|...|++++|+|+|++|++++ .||.|++
T Consensus 462 ~----~~~~~~~v~~~~~sp-d~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~-~dg~v~l 534 (577)
T 2ymu_A 462 T----LTGHSSSVRGVAFSP-DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASAS-DDKTVKL 534 (577)
T ss_dssp E----EECCSSCEEEEEECT-TSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEE-TTSEEEE
T ss_pred E----EcCCCCCEEEEEEcC-CCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEE-CcCEEEE
Confidence 2 256788899999999 7889999999999999995 6788899999999999999999999999999 9999999
Q ss_pred Eeccccee
Q 022019 293 WDLRKAVQ 300 (304)
Q Consensus 293 wd~~~~~~ 300 (304)
||. +++.
T Consensus 535 wd~-~~~~ 541 (577)
T 2ymu_A 535 WNR-NGQL 541 (577)
T ss_dssp ECT-TSCE
T ss_pred EeC-CCCE
Confidence 996 4443
No 70
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=3.8e-31 Score=218.78 Aligned_cols=221 Identities=18% Similarity=0.279 Sum_probs=173.0
Q ss_pred eecCCCCceeEEEEcC-CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccce
Q 022019 55 TSSIPNNFLKGIKWSP-DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSA 133 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~-~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 133 (304)
.+.+|.+.|++++|+| ++++|++|+.||.|++||+.++................ .....|...|.+++|
T Consensus 38 ~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~v~~~~~------ 107 (408)
T 4a11_B 38 VERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGR----DHPDVHRYSVETVQW------ 107 (408)
T ss_dssp ECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECT----TCTTCCSSCEEEEEE------
T ss_pred eeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccc----cccccCCCcEEEEEE------
Confidence 6678999999999999 99999999999999999998765533322110000000 000136688999988
Q ss_pred eCC-CccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCC---cEEEEE-cCCeEEEEEcCCCCccc
Q 022019 134 SDP-TSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTG---TKIFAG-YNKSVRVFDVHRPGRDF 208 (304)
Q Consensus 134 ~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~---~~l~~~-~d~~i~v~d~~~~~~~~ 208 (304)
+| ++.+|++++.||.|++||+.+++....+.... .+.++.|+|.+ .+++++ .++.|++||++.... .
T Consensus 108 -~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~-~ 179 (408)
T 4a11_B 108 -YPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEE------TVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSC-S 179 (408)
T ss_dssp -CTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSS------CEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCC-C
T ss_pred -ccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCC------ceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcce-e
Confidence 55 67799999999999999999998887776433 78899999854 478855 999999999986421 1
Q ss_pred eeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCce-EeEEe---------------ccccCCeEEEE
Q 022019 209 EKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME-LLYVL---------------HGQEGGVTHVQ 272 (304)
Q Consensus 209 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~---------------~~~~~~v~~~~ 272 (304)
....+|...|.+++|+|++..++++|+.||.|++||++.+. ++..+ ..|...|.+++
T Consensus 180 -------~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 252 (408)
T 4a11_B 180 -------HILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLC 252 (408)
T ss_dssp -------EEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEE
T ss_pred -------eeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEE
Confidence 12256788899999999655579999999999999998765 44444 56888999999
Q ss_pred ECCCCcEEEEeeccCCeEEEEecccceee
Q 022019 273 FSRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 273 ~~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
|+|++.+|++++ .||.|++||+++++.+
T Consensus 253 ~~~~~~~l~~~~-~dg~i~vwd~~~~~~~ 280 (408)
T 4a11_B 253 FTSDGLHLLTVG-TDNRMRLWNSSNGENT 280 (408)
T ss_dssp ECTTSSEEEEEE-TTSCEEEEETTTCCBC
T ss_pred EcCCCCEEEEec-CCCeEEEEECCCCccc
Confidence 999999999999 9999999999987654
No 71
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-31 Score=222.68 Aligned_cols=221 Identities=10% Similarity=0.161 Sum_probs=174.8
Q ss_pred eeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCcccccccccc----------------------cc----
Q 022019 53 FRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLA----------------------KD---- 106 (304)
Q Consensus 53 ~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~----------------------~~---- 106 (304)
...+.+|...|.+++|+|++++|++++.||.|++||+.++............ ..
T Consensus 142 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (425)
T 1r5m_A 142 LNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFV 221 (425)
T ss_dssp EEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEE
T ss_pred eeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEE
Confidence 3467789999999999999999999999999999999876543322211100 00
Q ss_pred -------------CCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccc
Q 022019 107 -------------QDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEI 173 (304)
Q Consensus 107 -------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 173 (304)
...........+...+.+++| +|++++|++++.||.|++||+++++....+..+..
T Consensus 222 ~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~-------~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~---- 290 (425)
T 1r5m_A 222 IPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEF-------NDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQ---- 290 (425)
T ss_dssp EECGGGCEEEEETTCSSCSEEECCCSSCEEEEEE-------ETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSS----
T ss_pred EEcCCCeEEEEEcCCCceeeeeccCCCceEEEEE-------CCCCCEEEEEcCCCEEEEEECCCCccceEecCCCc----
Confidence 000111122245566777766 77889999999999999999999888777765544
Q ss_pred cceEEEEECCCCcEEEE-EcCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEec
Q 022019 174 TAAFSVAFNPTGTKIFA-GYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRE 252 (304)
Q Consensus 174 ~~v~~i~~~~~~~~l~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~ 252 (304)
.|.++.|+|++ .+++ +.|+.|++||++... ... ....|...+.+++|+| ++.+|++++.||.|++||+
T Consensus 291 -~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~----~~~----~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~i~~~ 359 (425)
T 1r5m_A 291 -SIVSASWVGDD-KVISCSMDGSVRLWSLKQNT----LLA----LSIVDGVPIFAGRISQ-DGQKYAVAFMDGQVNVYDL 359 (425)
T ss_dssp -CEEEEEEETTT-EEEEEETTSEEEEEETTTTE----EEE----EEECTTCCEEEEEECT-TSSEEEEEETTSCEEEEEC
T ss_pred -cEEEEEECCCC-EEEEEeCCCcEEEEECCCCc----EeE----ecccCCccEEEEEEcC-CCCEEEEEECCCeEEEEEC
Confidence 89999999999 6664 599999999997631 112 2245677899999999 7789999999999999999
Q ss_pred CCce--------------------EeEEeccccC--CeEEEEECCCCcEEEEeeccCCeEEEEecc
Q 022019 253 DNME--------------------LLYVLHGQEG--GVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 253 ~~~~--------------------~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~ 296 (304)
++++ ++..+.+|.. .|++++|+|++++|++++ .||.|++|+++
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~iw~~~ 424 (425)
T 1r5m_A 360 KKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAY-SLQEGSVVAIP 424 (425)
T ss_dssp HHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEE-SSSCCEEEECC
T ss_pred CCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEe-cCceEEEEeec
Confidence 9888 8899999976 999999999999999999 99999999985
No 72
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=8.8e-32 Score=220.08 Aligned_cols=233 Identities=14% Similarity=0.220 Sum_probs=177.3
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEE
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (304)
.+..|+..... ......+.+|...|++++|+|++++|++++.||.|++||+.++.... ...
T Consensus 31 ~v~i~~~~~~~----~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~---------------~~~ 91 (372)
T 1k8k_C 31 EVHIYEKSGNK----WVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKP---------------TLV 91 (372)
T ss_dssp EEEEEEEETTE----EEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEE---------------EEE
T ss_pred EEEEEeCCCCc----EEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeee---------------eEE
Confidence 34455544432 12344777999999999999999999999999999999987543211 111
Q ss_pred EeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cC
Q 022019 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YN 193 (304)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d 193 (304)
...+...+.+++| +|++++|++++.||.|++||++.+.......... ..+...|.+++|+|++++++++ .|
T Consensus 92 ~~~~~~~v~~~~~-------~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~d 163 (372)
T 1k8k_C 92 ILRINRAARCVRW-------APNEKKFAVGSGSRVISICYFEQENDWWVCKHIK-KPIRSTVLSLDWHPNSVLLAAGSCD 163 (372)
T ss_dssp CCCCSSCEEEEEE-------CTTSSEEEEEETTSSEEEEEEETTTTEEEEEEEC-TTCCSCEEEEEECTTSSEEEEEETT
T ss_pred eecCCCceeEEEE-------CCCCCEEEEEeCCCEEEEEEecCCCcceeeeeee-cccCCCeeEEEEcCCCCEEEEEcCC
Confidence 2345678888888 7789999999999999999998876322111110 1233489999999999999965 89
Q ss_pred CeEEEEEcCCCCccc----------eeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEecc
Q 022019 194 KSVRVFDVHRPGRDF----------EKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHG 263 (304)
Q Consensus 194 ~~i~v~d~~~~~~~~----------~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 263 (304)
+.|++||++...... ...........+|...+.+++|+| ++.+|++++.||.|++||+++++++..+..
T Consensus 164 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 242 (372)
T 1k8k_C 164 FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSA-NGSRVAWVSHDSTVCLADADKKMAVATLAS 242 (372)
T ss_dssp SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECS-SSSEEEEEETTTEEEEEEGGGTTEEEEEEC
T ss_pred CCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECC-CCCEEEEEeCCCEEEEEECCCCceeEEEcc
Confidence 999999975321000 000112222356788899999999 777999999999999999999999999999
Q ss_pred ccCCeEEEEECCCCcEEEEeeccCCeEEEEeccc
Q 022019 264 QEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 264 ~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~ 297 (304)
|...|.+++|+|++.+|+++ .|+.|++|++++
T Consensus 243 ~~~~v~~~~~~~~~~~l~~~--~d~~i~i~~~~~ 274 (372)
T 1k8k_C 243 ETLPLLAVTFITESSLVAAG--HDCFPVLFTYDS 274 (372)
T ss_dssp SSCCEEEEEEEETTEEEEEE--TTSSCEEEEEET
T ss_pred CCCCeEEEEEecCCCEEEEE--eCCeEEEEEccC
Confidence 99999999999999977766 599999999988
No 73
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.4e-31 Score=218.93 Aligned_cols=205 Identities=15% Similarity=0.225 Sum_probs=168.5
Q ss_pred CCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCc
Q 022019 59 PNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS 138 (304)
Q Consensus 59 h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 138 (304)
|.+.|++++|+|++++|++++.||.|++||.. +.. ......|...|.+++| +|++
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~-~~~-----------------~~~~~~~~~~v~~~~~-------~~~~ 161 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWNKT-GAL-----------------LNVLNFHRAPIVSVKW-------NKDG 161 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEETT-SCE-----------------EEEECCCCSCEEEEEE-------CTTS
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEeCC-CCe-----------------eeeccCCCccEEEEEE-------CCCC
Confidence 78899999999999999999999999999933 211 1133346678888888 6788
Q ss_pred cEEEEEeCCCCEEEEEcCCCeeeEEeeccccc------------------------------------------------
Q 022019 139 CVFASTTRDHPIHLWDATTGLLRCTYRAYDAV------------------------------------------------ 170 (304)
Q Consensus 139 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~------------------------------------------------ 170 (304)
++|++++.||.|++||+.+++....+..+...
T Consensus 162 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~ 241 (425)
T 1r5m_A 162 THIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTG 241 (425)
T ss_dssp SEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSE
T ss_pred CEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceee
Confidence 89999999999999999888766554432211
Q ss_pred ---ccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCe
Q 022019 171 ---DEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQT 246 (304)
Q Consensus 171 ---~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~ 246 (304)
.+...|.+++|+|++++|+++ .|+.|++||++... ......+|...+.+++|+| ++ ++++++.||.
T Consensus 242 ~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~--------~~~~~~~~~~~i~~~~~~~-~~-~l~~~~~d~~ 311 (425)
T 1r5m_A 242 KLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGN--------SQNCFYGHSQSIVSASWVG-DD-KVISCSMDGS 311 (425)
T ss_dssp EECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBS--------CSEEECCCSSCEEEEEEET-TT-EEEEEETTSE
T ss_pred eeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCc--------cceEecCCCccEEEEEECC-CC-EEEEEeCCCc
Confidence 234578999999999999965 89999999998632 1112245778899999999 55 9999999999
Q ss_pred EEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEecccce
Q 022019 247 SAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAV 299 (304)
Q Consensus 247 i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~ 299 (304)
|++||+++++++..+..|...|.+++|+|++++|++++ .||.|++||+++++
T Consensus 312 i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 312 VRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAF-MDGQVNVYDLKKLN 363 (425)
T ss_dssp EEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEE-TTSCEEEEECHHHH
T ss_pred EEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEE-CCCeEEEEECCCCc
Confidence 99999999999999999999999999999999999999 99999999998876
No 74
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.6e-32 Score=238.84 Aligned_cols=213 Identities=17% Similarity=0.269 Sum_probs=171.2
Q ss_pred eecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
.+.+|.+.|++++|+|+|++|++|+.||+|+|||+.++. .........|...|.+++|.|
T Consensus 4 ~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~---------------~~~~~~l~~h~~~V~~l~~s~----- 63 (753)
T 3jro_A 4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGET---------------HKLIDTLTGHEGPVWRVDWAH----- 63 (753)
T ss_dssp ----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTE---------------EEEEEEECCCSSCEEEEEECC-----
T ss_pred ecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCC---------------CccceeccCCcCceEEEEecC-----
Confidence 678999999999999999999999999999999986321 111223445778999999843
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCCe--eeEEeecccccccccceEEEEECCC--CcEEEEE-cCCeEEEEEcCCCCccce
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTGL--LRCTYRAYDAVDEITAAFSVAFNPT--GTKIFAG-YNKSVRVFDVHRPGRDFE 209 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~~~~~~v~~i~~~~~--~~~l~~~-~d~~i~v~d~~~~~~~~~ 209 (304)
+.++++|++|+.||.|++||+.+++ ....+..+. ..|.+++|+|+ +..+++| .||.|++||++.......
T Consensus 64 ~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~-----~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~ 138 (753)
T 3jro_A 64 PKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHS-----ASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSP 138 (753)
T ss_dssp TTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCS-----SCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCC
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCcccccccccCCC-----CCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcce
Confidence 1238999999999999999999886 444444444 38999999999 8899865 999999999987432111
Q ss_pred eeeeeeccccccccceeEEEeecC------------CCcEEEEEecCCeEEEEecCCc----eEeEEeccccCCeEEEEE
Q 022019 210 KYSTLKGNKEGQAGIMSAIAFSPT------------HTGMLAIGSYSQTSAIYREDNM----ELLYVLHGQEGGVTHVQF 273 (304)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~~~~~p~------------~~~~l~~~~~dg~i~i~d~~~~----~~~~~~~~~~~~v~~~~~ 273 (304)
. ...+|...|.+++|+|. ++.++++|+.||.|++||++++ .+...+.+|...|++++|
T Consensus 139 --~----~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~ 212 (753)
T 3jro_A 139 --I----IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAW 212 (753)
T ss_dssp --E----EEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEE
T ss_pred --e----EeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEe
Confidence 1 12567788999999994 3779999999999999999876 667788899999999999
Q ss_pred CCC---CcEEEEeeccCCeEEEEecccce
Q 022019 274 SRD---GNYLYTGGRKDPYILCWDLRKAV 299 (304)
Q Consensus 274 ~~~---~~~l~~~~~~d~~i~vwd~~~~~ 299 (304)
+|+ +.+|++++ .||.|++||+++++
T Consensus 213 sp~~~~~~~l~s~s-~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 213 SPTVLLRSYLASVS-QDRTCIIWTQDNEQ 240 (753)
T ss_dssp CCCCSSSEEEEEEE-SSSCEEEEEESSSS
T ss_pred ccCCCCCCEEEEEe-cCCEEEEecCCCCC
Confidence 999 89999999 99999999998864
No 75
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.6e-33 Score=234.07 Aligned_cols=211 Identities=10% Similarity=0.022 Sum_probs=160.6
Q ss_pred eeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccc
Q 022019 53 FRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMS 132 (304)
Q Consensus 53 ~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 132 (304)
...+.+|.+.|++++|++++ .|++|+.||+|++||+.++.. .......|...|.++++
T Consensus 259 ~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~----------------~~~~~~~H~~~V~sv~~----- 316 (524)
T 2j04_B 259 SLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEV----------------PSFYDQVHDSYILSVST----- 316 (524)
T ss_dssp SEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSS----------------CSEEEECSSSCEEEEEE-----
T ss_pred eEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCC----------------ceEEeecccccEEEEEE-----
Confidence 34678999999999999864 899999999999999975421 11134457788998843
Q ss_pred eeCCCc-cEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCcccee
Q 022019 133 ASDPTS-CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEK 210 (304)
Q Consensus 133 ~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~ 210 (304)
+++|++ .+|++|+.|++|+|||+++++....+..+.. ...|.+++|+|+++.++++ .|++|++||++.... .
T Consensus 317 ~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~---~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~-~-- 390 (524)
T 2j04_B 317 AYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFR---GSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFA-V-- 390 (524)
T ss_dssp ECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECS---CCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTC-C--
T ss_pred EcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccc---cCcccceEeCCCcCeEEEeCCCCcEEEEECccccc-c--
Confidence 236677 8999999999999999998876655554331 0147899999999988865 899999999987421 1
Q ss_pred eeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCC------------------------------------
Q 022019 211 YSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN------------------------------------ 254 (304)
Q Consensus 211 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~------------------------------------ 254 (304)
.. ..+|...|.+++|+| ++.+|++|+.||+|++||+..
T Consensus 391 -~~----l~gH~~~V~sva~Sp-~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~ 464 (524)
T 2j04_B 391 -HP----LVSRETTITAIGVSR-LHPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSY 464 (524)
T ss_dssp -EE----EEECSSCEEEEECCS-SCCBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCC
T ss_pred -ee----eecCCCceEEEEeCC-CCCeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCc
Confidence 11 246888999999999 677899999999999997421
Q ss_pred --------ceEeEEeccccCCeEEEEECCCCc---EEEEeeccCCeEEEEecccc
Q 022019 255 --------MELLYVLHGQEGGVTHVQFSRDGN---YLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 255 --------~~~~~~~~~~~~~v~~~~~~~~~~---~l~~~~~~d~~i~vwd~~~~ 298 (304)
+..+..+.+|...|.+++|+|++. +|++|+ .||.|+||+++-.
T Consensus 465 ~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~-~~g~vrlw~l~~~ 518 (524)
T 2j04_B 465 EVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSN-SAGLLTLEYLSLE 518 (524)
T ss_dssp CCCC-------------CCCSCCCEEECCSTTTTTEEEEEC-TTSEEEEEECSCC
T ss_pred eecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhc-cCceEEEEEcccc
Confidence 111233456788999999999964 899999 9999999999754
No 76
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2.9e-32 Score=227.71 Aligned_cols=224 Identities=15% Similarity=0.199 Sum_probs=158.1
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcC-CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceE
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSP-DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEAS 113 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~-~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (304)
.+.+|++....... ...+.+|.+.|++|+|+| ++.+|+||+.||+|++||+.++... .
T Consensus 143 ~i~lWd~~~~~~~~----~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~-----------------~ 201 (435)
T 4e54_B 143 DIMLWNFGIKDKPT----FIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILR-----------------V 201 (435)
T ss_dssp CEEEECSSCCSCCE----EECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEE-----------------E
T ss_pred EEEEEECCCCCcee----EEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCcee-----------------E
Confidence 45556655443222 224568999999999998 7899999999999999998743211 0
Q ss_pred EEeec--CCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCc-EEEE
Q 022019 114 LVVTE--GESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGT-KIFA 190 (304)
Q Consensus 114 ~~~~~--~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~~ 190 (304)
+...+ ...+.+++| +|++.+|++|+.||.|++||++. +....+..|. ..|.+++|+|++. ++++
T Consensus 202 ~~~~~~~~~~~~~~~~-------~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~-----~~v~~v~~~p~~~~~~~s 268 (435)
T 4e54_B 202 FASSDTINIWFCSLDV-------SASSRMVVTGDNVGNVILLNMDG-KELWNLRMHK-----KKVTHVALNPCCDWFLAT 268 (435)
T ss_dssp EECCSSCSCCCCCEEE-------ETTTTEEEEECSSSBEEEEESSS-CBCCCSBCCS-----SCEEEEEECTTCSSEEEE
T ss_pred EeccCCCCccEEEEEE-------CCCCCEEEEEeCCCcEeeeccCc-ceeEEEeccc-----ceEEeeeecCCCceEEEE
Confidence 11111 123344444 78999999999999999999864 4444455444 3899999999876 5555
Q ss_pred E-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeE----------
Q 022019 191 G-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLY---------- 259 (304)
Q Consensus 191 ~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~---------- 259 (304)
+ .|+.|++||++....... .....+|...|++++|+| ++.+|++|+.||.|+|||++++....
T Consensus 269 ~s~d~~v~iwd~~~~~~~~~-----~~~~~~h~~~v~~~~~sp-dg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~ 342 (435)
T 4e54_B 269 ASVDQTVKIWDLRQVRGKAS-----FLYSLPHRHPVNAACFSP-DGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHF 342 (435)
T ss_dssp EETTSBCCEEETTTCCSSSC-----CSBCCBCSSCEEECCBCT-TSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCC
T ss_pred ecCcceeeEEecccccccce-----EEEeeeccccccceeECC-CCCeeEEEcCCCEEEEEECCCCccceEEeccccccc
Confidence 5 999999999987432211 112256888999999999 77899999999999999986532111
Q ss_pred --------------------------------------------------Ee-ccccCCeEEE-EECCCCcEEEEeeccC
Q 022019 260 --------------------------------------------------VL-HGQEGGVTHV-QFSRDGNYLYTGGRKD 287 (304)
Q Consensus 260 --------------------------------------------------~~-~~~~~~v~~~-~~~~~~~~l~~~~~~d 287 (304)
.+ .+|...|.++ +|+|+|.+|++|+ |
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~--d 420 (435)
T 4e54_B 343 QHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM--G 420 (435)
T ss_dssp SSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC--S
T ss_pred ccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc--C
Confidence 11 1344556666 6999999998765 7
Q ss_pred CeEEEEeccccee
Q 022019 288 PYILCWDLRKAVQ 300 (304)
Q Consensus 288 ~~i~vwd~~~~~~ 300 (304)
+.|+||++++++.
T Consensus 421 ~~i~iW~~~~gk~ 433 (435)
T 4e54_B 421 YHILIWSQQEART 433 (435)
T ss_dssp SEEEECCCC----
T ss_pred CcEEEEECCcCee
Confidence 8999999998864
No 77
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.6e-31 Score=217.69 Aligned_cols=219 Identities=17% Similarity=0.294 Sum_probs=171.1
Q ss_pred eeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEE
Q 022019 36 LIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLV 115 (304)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (304)
+..|++..... +..+.+|...|.+++| ++.+|++|+.||.|++||+..... .....
T Consensus 158 i~iwd~~~~~~------~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~----------------~~~~~ 213 (401)
T 4aez_A 158 VDIYDVESQTK------LRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANH----------------QIGTL 213 (401)
T ss_dssp EEEEETTTCCE------EEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSC----------------EEEEE
T ss_pred EEEEECcCCeE------EEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcc----------------eeeEE
Confidence 44555554433 3467799999999999 467999999999999999974321 12244
Q ss_pred eecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcE-EEEE---
Q 022019 116 VTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTK-IFAG--- 191 (304)
Q Consensus 116 ~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~-l~~~--- 191 (304)
..|...|.+++| +|++.+|++++.||.|++||+++++....+..+.. .|.+++|+|++.. ++++
T Consensus 214 ~~~~~~v~~~~~-------~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~-----~v~~~~~~p~~~~ll~~~~gs 281 (401)
T 4aez_A 214 QGHSSEVCGLAW-------RSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNA-----AVKAVAWCPWQSNLLATGGGT 281 (401)
T ss_dssp ECCSSCEEEEEE-------CTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSS-----CCCEEEECTTSTTEEEEECCT
T ss_pred cCCCCCeeEEEE-------cCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcc-----eEEEEEECCCCCCEEEEecCC
Confidence 557788999988 77899999999999999999999888877765554 8999999997754 4454
Q ss_pred cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEE--ecCCeEEEEecCCceE--eEEeccccCC
Q 022019 192 YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIG--SYSQTSAIYREDNMEL--LYVLHGQEGG 267 (304)
Q Consensus 192 ~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~--~~dg~i~i~d~~~~~~--~~~~~~~~~~ 267 (304)
.|+.|++||++... ....+ .+...+.+++|+| ++.+++++ +.||.|++||+.++.. ...+.+|...
T Consensus 282 ~d~~i~i~d~~~~~----~~~~~-----~~~~~v~~~~~s~-~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~ 351 (401)
T 4aez_A 282 MDKQIHFWNAATGA----RVNTV-----DAGSQVTSLIWSP-HSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTR 351 (401)
T ss_dssp TTCEEEEEETTTCC----EEEEE-----ECSSCEEEEEECS-SSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSC
T ss_pred CCCEEEEEECCCCC----EEEEE-----eCCCcEEEEEECC-CCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCC
Confidence 59999999998642 11222 2445699999999 66677774 4899999999998654 4456789999
Q ss_pred eEEEEECCCCcEEEEeeccCCeEEEEecccceee
Q 022019 268 VTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 268 v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
|.+++|+|+|++|++++ .||.|++|++.+++.+
T Consensus 352 v~~~~~s~dg~~l~s~~-~dg~i~iw~~~~~~~~ 384 (401)
T 4aez_A 352 VLYSALSPDGRILSTAA-SDENLKFWRVYDGDHV 384 (401)
T ss_dssp CCEEEECTTSSEEEEEC-TTSEEEEEECCC----
T ss_pred EEEEEECCCCCEEEEEe-CCCcEEEEECCCCccc
Confidence 99999999999999999 9999999999988754
No 78
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=7.3e-31 Score=214.10 Aligned_cols=222 Identities=15% Similarity=0.262 Sum_probs=169.3
Q ss_pred ceeeeecCCCCceeEEEEcCC---CCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEee
Q 022019 51 NQFRTSSIPNNFLKGIKWSPD---GSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCW 127 (304)
Q Consensus 51 ~~~~~~~~h~~~V~~i~~s~~---~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 127 (304)
+.+..+.+|.+.|++++|+|+ |++|++|+.||.|++||+.+... ........|...|.+++|
T Consensus 30 ~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~---------------~~~~~~~~h~~~v~~~~~ 94 (368)
T 3mmy_A 30 KDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ---------------TIPKAQQMHTGPVLDVCW 94 (368)
T ss_dssp CCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSC---------------EEEEEEEECSSCEEEEEE
T ss_pred ceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCc---------------eeEEEeccccCCEEEEEE
Confidence 445578899999999999998 69999999999999999985211 111345567889999988
Q ss_pred cCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEE--CCCCcEEEEE-cCCeEEEEEcCCC
Q 022019 128 FPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAF--NPTGTKIFAG-YNKSVRVFDVHRP 204 (304)
Q Consensus 128 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~--~~~~~~l~~~-~d~~i~v~d~~~~ 204 (304)
+|++++|++++.||.|++||+.+++..... .+. ..|.+++| +|++.+++++ .|+.|++||++..
T Consensus 95 -------~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-~~~-----~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 161 (368)
T 3mmy_A 95 -------SDDGSKVFTASCDKTAKMWDLSSNQAIQIA-QHD-----APVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSS 161 (368)
T ss_dssp -------CTTSSEEEEEETTSEEEEEETTTTEEEEEE-ECS-----SCEEEEEEEECSSCEEEEEEETTSEEEEECSSCS
T ss_pred -------CcCCCEEEEEcCCCcEEEEEcCCCCceeec-ccc-----CceEEEEEEeCCCCCEEEEccCCCcEEEEECCCC
Confidence 779999999999999999999998876533 233 38999999 9999988865 9999999999874
Q ss_pred Cccceeeee----------------------------------eeccccccccceeEEEeecCC---CcEEEEEecCCeE
Q 022019 205 GRDFEKYST----------------------------------LKGNKEGQAGIMSAIAFSPTH---TGMLAIGSYSQTS 247 (304)
Q Consensus 205 ~~~~~~~~~----------------------------------~~~~~~~~~~~v~~~~~~p~~---~~~l~~~~~dg~i 247 (304)
... ..+.. .......+...+.++.+.++. ...+++++.||.|
T Consensus 162 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i 240 (368)
T 3mmy_A 162 NPM-MVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV 240 (368)
T ss_dssp SCS-EEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEE
T ss_pred cEE-EEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcE
Confidence 321 11110 000001122234455555411 1239999999999
Q ss_pred EEEecCCc---eEeEEeccccC------------CeEEEEECCCCcEEEEeeccCCeEEEEecccceeee
Q 022019 248 AIYREDNM---ELLYVLHGQEG------------GVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVV 302 (304)
Q Consensus 248 ~i~d~~~~---~~~~~~~~~~~------------~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~~ 302 (304)
++||++.. ..+..+.+|.. .|++++|+|++++|++++ .||.|++||+++++.+.
T Consensus 241 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~-~dg~i~iwd~~~~~~~~ 309 (368)
T 3mmy_A 241 AIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVG-SDGRFSFWDKDARTKLK 309 (368)
T ss_dssp EEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEE-TTSCEEEEETTTTEEEE
T ss_pred EEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEc-cCCeEEEEECCCCcEEE
Confidence 99999877 56777777776 799999999999999999 99999999999987653
No 79
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.4e-31 Score=217.60 Aligned_cols=232 Identities=12% Similarity=0.137 Sum_probs=178.8
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcCC---CCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccc
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPD---GSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYE 111 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~---~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~ 111 (304)
.+..|++........ ...+|.+.|.+++|+|+ +.+|++|+.||.|++||+.++.. .
T Consensus 45 ~v~iw~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~----------------~ 103 (357)
T 3i2n_A 45 VIQLYEIQHGDLKLL-----REIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEM----------------P 103 (357)
T ss_dssp EEEEEEECSSSEEEE-----EEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSS----------------C
T ss_pred EEEEEeCCCCcccce-----eeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCc----------------c
Confidence 355666665443321 23378999999999998 69999999999999999986541 1
Q ss_pred eEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCe-eeEEeecccccccccceEEEE----ECCCCc
Q 022019 112 ASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGL-LRCTYRAYDAVDEITAAFSVA----FNPTGT 186 (304)
Q Consensus 112 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~~~~~v~~i~----~~~~~~ 186 (304)
......|...|.++.|.+. .+++|++++|++++.||.|++||+++++ ....+..+.. .....+.++. |+|+++
T Consensus 104 ~~~~~~~~~~v~~~~~~~~-~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~ 181 (357)
T 3i2n_A 104 VYSVKGHKEIINAIDGIGG-LGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQG-ENKRDCWTVAFGNAYNQEER 181 (357)
T ss_dssp SEEECCCSSCEEEEEEESG-GGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTT-SCCCCEEEEEEECCCC-CCC
T ss_pred EEEEEecccceEEEeeccc-cccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCC-CCCCceEEEEEEeccCCCCC
Confidence 1133456788999988653 4568999999999999999999999876 5666654432 1233788888 788999
Q ss_pred EEEEE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecC--CCcEEEEEecCCeEEEEecCCceEeEEec-
Q 022019 187 KIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPT--HTGMLAIGSYSQTSAIYREDNMELLYVLH- 262 (304)
Q Consensus 187 ~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~- 262 (304)
+++++ .|+.|++||++.... .. ...+...+.+++|+|. ++.++++|+.||.|++||+++++++..+.
T Consensus 182 ~l~~~~~d~~i~i~d~~~~~~----~~-----~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 252 (357)
T 3i2n_A 182 VVCAGYDNGDIKLFDLRNMAL----RW-----ETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFAS 252 (357)
T ss_dssp EEEEEETTSEEEEEETTTTEE----EE-----EEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEE
T ss_pred EEEEEccCCeEEEEECccCce----ee-----ecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceee
Confidence 99966 899999999987421 11 1446678999999994 45689999999999999998877655554
Q ss_pred ----cccCCeEEEEECCCCc-EEEEeeccCCeEEEEecccce
Q 022019 263 ----GQEGGVTHVQFSRDGN-YLYTGGRKDPYILCWDLRKAV 299 (304)
Q Consensus 263 ----~~~~~v~~~~~~~~~~-~l~~~~~~d~~i~vwd~~~~~ 299 (304)
+|...|++++|+|+++ +|++++ .||.|++||++++.
T Consensus 253 ~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~ 293 (357)
T 3i2n_A 253 VSEKAHKSTVWQVRHLPQNRELFLTAG-GAGGLHLWKYEYPI 293 (357)
T ss_dssp EEEECCSSCEEEEEEETTEEEEEEEEE-TTSEEEEEEEECCS
T ss_pred eccCCCcCCEEEEEECCCCCcEEEEEe-CCCcEEEeecCCCc
Confidence 8999999999999998 799999 99999999998653
No 80
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=3.4e-31 Score=237.60 Aligned_cols=212 Identities=20% Similarity=0.266 Sum_probs=180.3
Q ss_pred eeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccc
Q 022019 53 FRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMS 132 (304)
Q Consensus 53 ~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 132 (304)
.+.+.+|.+.|++++|+|++.+|++++.||.|+|||+.++... .....|...|.+++|
T Consensus 6 ~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~-----------------~~~~~~~~~v~~~~~----- 63 (814)
T 3mkq_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEV-----------------RSIQVTETPVRAGKF----- 63 (814)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEE-----------------EEEECCSSCEEEEEE-----
T ss_pred ceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceE-----------------EEEecCCCcEEEEEE-----
Confidence 4577899999999999999999999999999999998764321 133356688999988
Q ss_pred eeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceee
Q 022019 133 ASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKY 211 (304)
Q Consensus 133 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~ 211 (304)
+|++++|++++.||.|++||+.+++....+..+.. .|.+++|+|++++|+++ .|+.|++||++....
T Consensus 64 --s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~-----~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~----- 131 (814)
T 3mkq_A 64 --IARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPD-----YIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWA----- 131 (814)
T ss_dssp --EGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSS-----CEEEEEECSSSSEEEEEETTSEEEEEEGGGTSE-----
T ss_pred --eCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCC-----CEEEEEEeCCCCEEEEEcCCCEEEEEECCCCce-----
Confidence 66899999999999999999999998888876654 89999999999999965 999999999976321
Q ss_pred eeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEecccc-CCeEEEEECC--CCcEEEEeeccCC
Q 022019 212 STLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQE-GGVTHVQFSR--DGNYLYTGGRKDP 288 (304)
Q Consensus 212 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~v~~~~~~~--~~~~l~~~~~~d~ 288 (304)
......+|...|.+++|+|.++..+++++.||.|++||+..+.+...+..+. ..+..++|+| ++.+|++++ .||
T Consensus 132 --~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~-~dg 208 (814)
T 3mkq_A 132 --LEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITAS-DDL 208 (814)
T ss_dssp --EEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEEC-TTS
T ss_pred --EEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEe-CCC
Confidence 1222256788899999999667799999999999999999888777776555 7899999999 999999999 999
Q ss_pred eEEEEecccceee
Q 022019 289 YILCWDLRKAVQV 301 (304)
Q Consensus 289 ~i~vwd~~~~~~~ 301 (304)
.|++||+++++.+
T Consensus 209 ~i~~~d~~~~~~~ 221 (814)
T 3mkq_A 209 TIKIWDYQTKSCV 221 (814)
T ss_dssp EEEEEETTTTEEE
T ss_pred EEEEEECCCCcEE
Confidence 9999999988654
No 81
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2e-30 Score=218.36 Aligned_cols=224 Identities=17% Similarity=0.234 Sum_probs=174.4
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEE
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (304)
.+..|+..... .+..+.+|.+.|++++|+|++ +|++|+.||+|++||+.++... ..
T Consensus 143 ~i~vwd~~~~~------~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~-----------------~~ 198 (464)
T 3v7d_B 143 MIRVYDSINKK------FLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCT-----------------HV 198 (464)
T ss_dssp CEEEEETTTTE------EEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEE-----------------EE
T ss_pred cEEEEECCCCc------EEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEE-----------------EE
Confidence 34556655443 334678999999999999988 9999999999999999865322 13
Q ss_pred EeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecc------------------cccccccce
Q 022019 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAY------------------DAVDEITAA 176 (304)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~------------------~~~~~~~~v 176 (304)
...|...|.+++|.+ .+++.++++++.||.|++||+.++......... ....+...+
T Consensus 199 ~~~h~~~v~~l~~~~-----~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 273 (464)
T 3v7d_B 199 FEGHNSTVRCLDIVE-----YKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASV 273 (464)
T ss_dssp ECCCSSCEEEEEEEE-----SSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCE
T ss_pred ECCCCCccEEEEEec-----CCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceE
Confidence 334678899998854 468889999999999999999876533211000 001223356
Q ss_pred EEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCc
Q 022019 177 FSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM 255 (304)
Q Consensus 177 ~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~ 255 (304)
.++ ++++++++++ .|+.|++||+++. .. .....+|...|.+++|+| ++.++++|+.||.|++||++++
T Consensus 274 ~~~--~~~~~~l~~~~~d~~i~vwd~~~~----~~----~~~~~~~~~~v~~~~~~~-~~~~l~sg~~dg~i~vwd~~~~ 342 (464)
T 3v7d_B 274 RTV--SGHGNIVVSGSYDNTLIVWDVAQM----KC----LYILSGHTDRIYSTIYDH-ERKRCISASMDTTIRIWDLENG 342 (464)
T ss_dssp EEE--EEETTEEEEEETTSCEEEEETTTT----EE----EEEECCCSSCEEEEEEET-TTTEEEEEETTSCEEEEETTTT
T ss_pred EEE--cCCCCEEEEEeCCCeEEEEECCCC----cE----EEEecCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEECCCC
Confidence 665 5678888865 9999999999863 11 122256888899999999 7789999999999999999999
Q ss_pred eEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEecccceee
Q 022019 256 ELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 256 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
+++..+.+|...|.++.|+ +.+|++++ .||.|++||+++++..
T Consensus 343 ~~~~~~~~h~~~v~~~~~~--~~~l~s~s-~dg~v~vwd~~~~~~~ 385 (464)
T 3v7d_B 343 ELMYTLQGHTALVGLLRLS--DKFLVSAA-ADGSIRGWDANDYSRK 385 (464)
T ss_dssp EEEEEECCCSSCEEEEEEC--SSEEEEEE-TTSEEEEEETTTCCEE
T ss_pred cEEEEEeCCCCcEEEEEEc--CCEEEEEe-CCCcEEEEECCCCcee
Confidence 9999999999999999997 57999999 9999999999987654
No 82
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=4.9e-31 Score=214.37 Aligned_cols=209 Identities=11% Similarity=0.129 Sum_probs=147.7
Q ss_pred eecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
...+|.+.|++++|+|||++|++|+.|+ +++|++.+.... ...+...+..+.+
T Consensus 14 ~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~-------------------~~~~~~~~~~~~~------- 66 (355)
T 3vu4_A 14 PENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHI-------------------MSQEMRHLSKVRM------- 66 (355)
T ss_dssp -----CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEE-------------------EEEECSCCCEEEE-------
T ss_pred ccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCccee-------------------eeeecCCeEEEEE-------
Confidence 4578999999999999999999998775 789998643221 1111112333444
Q ss_pred CCCccEE-EEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCc---------------------------
Q 022019 135 DPTSCVF-ASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGT--------------------------- 186 (304)
Q Consensus 135 ~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~--------------------------- 186 (304)
.++++.+ ++++.|++|++||+.+++....+.... .|.++.|+++..
T Consensus 67 ~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~~~~------~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~ 140 (355)
T 3vu4_A 67 LHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIKVDA------PVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFG 140 (355)
T ss_dssp CTTSSEEEEECSSTTEEEEEETTTTEEEEEEECSS------CEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEE
T ss_pred cCCCCEEEEEECCccEEEEEECCCCcEEEEEECCC------ceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCC
Confidence 4455555 567788999999999998887776432 677888876531
Q ss_pred --------EEE-E-E-cCCeEEEEEcCCCCcccee--------eeeeeccccccccceeEEEeecCCCcEEEEEecCCe-
Q 022019 187 --------KIF-A-G-YNKSVRVFDVHRPGRDFEK--------YSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQT- 246 (304)
Q Consensus 187 --------~l~-~-~-~d~~i~v~d~~~~~~~~~~--------~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~- 246 (304)
+++ + | .+|.|++||++........ +........+|...|.+++|+| ++.+|++|+.||+
T Consensus 141 ~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~-~g~~l~s~s~d~~~ 219 (355)
T 3vu4_A 141 GVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNR-KSDMVATCSQDGTI 219 (355)
T ss_dssp EEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECT-TSSEEEEEETTCSE
T ss_pred ceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECC-CCCEEEEEeCCCCE
Confidence 222 1 2 4455555555432100000 0000223467899999999999 7889999999998
Q ss_pred EEEEecCCceEeEEec-c-ccCCeEEEEECCCCcEEEEeeccCCeEEEEecccc
Q 022019 247 SAIYREDNMELLYVLH-G-QEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 247 i~i~d~~~~~~~~~~~-~-~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~ 298 (304)
|++||+++++++..+. + |...|++++|+|+|++|++++ .|++|++||++++
T Consensus 220 v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s-~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 220 IRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVS-DKWTLHVFEIFND 272 (355)
T ss_dssp EEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEE-TTCEEEEEESSCC
T ss_pred EEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEE-CCCEEEEEEccCC
Confidence 9999999999999998 5 999999999999999999999 9999999999765
No 83
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.6e-31 Score=217.95 Aligned_cols=234 Identities=13% Similarity=0.265 Sum_probs=178.8
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcCC----CCeEEEecCCCeEEEeeCCCCCCccccccccccccCCcc
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPD----GSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSY 110 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~----~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~ 110 (304)
.+..|+............. ....|...|++++|+|+ +.+|++|+.||.|++||+.+++..
T Consensus 45 ~v~vw~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~--------------- 108 (366)
T 3k26_A 45 RVTLYECHSQGEIRLLQSY-VDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCI--------------- 108 (366)
T ss_dssp EEEEEEECGGGCEEEEEEE-ECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEE---------------
T ss_pred EEEEEEcCCCcEEEeeeec-cccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEe---------------
Confidence 3566766655444322211 22247889999999998 679999999999999999865332
Q ss_pred ceEEEeecCCeEEEEeecCccceeCC-CccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE
Q 022019 111 EASLVVTEGESVYDFCWFPHMSASDP-TSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF 189 (304)
Q Consensus 111 ~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~ 189 (304)
.....|...|.+++| +| ++.+|++++.||.|++||+++++....+.... .+...|.+++|+|++.+|+
T Consensus 109 --~~~~~~~~~i~~~~~-------~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~ 177 (366)
T 3k26_A 109 --KHYVGHGNAINELKF-------HPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVE--GHRDEVLSADYDLLGEKIM 177 (366)
T ss_dssp --EEEESCCSCEEEEEE-------CSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTT--SCSSCEEEEEECTTSSEEE
T ss_pred --eeecCCCCcEEEEEE-------CCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccc--cccCceeEEEECCCCCEEE
Confidence 123346788999988 66 78899999999999999999998877763211 2334899999999999999
Q ss_pred EE-cCCeEEEEEcCCCCccceeee---------------------eeeccccccccceeEEEeecCCCcEEEEEecCCeE
Q 022019 190 AG-YNKSVRVFDVHRPGRDFEKYS---------------------TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTS 247 (304)
Q Consensus 190 ~~-~d~~i~v~d~~~~~~~~~~~~---------------------~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i 247 (304)
++ .|+.|++||++..... ..+. ........|...|.+++|++ .++++++.||.|
T Consensus 178 ~~~~dg~i~i~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~d~~i 253 (366)
T 3k26_A 178 SCGMDHSLKLWRINSKRMM-NAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLG---DLILSKSCENAI 253 (366)
T ss_dssp EEETTSCEEEEESCSHHHH-HHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEET---TEEEEECSSSEE
T ss_pred EecCCCCEEEEECCCCccc-cccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEcC---CEEEEEecCCEE
Confidence 65 9999999999863211 0000 00111234788899999983 489999999999
Q ss_pred EEEecCCce--------------EeEEeccccCCeEEEEECCC--CcEEEEeeccCCeEEEEeccccee
Q 022019 248 AIYREDNME--------------LLYVLHGQEGGVTHVQFSRD--GNYLYTGGRKDPYILCWDLRKAVQ 300 (304)
Q Consensus 248 ~i~d~~~~~--------------~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~d~~i~vwd~~~~~~ 300 (304)
++||++++. .+..+.+|...|++++|+|+ +++|++++ .||.|++||+.+++.
T Consensus 254 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~-~dg~i~vwd~~~~~~ 321 (366)
T 3k26_A 254 VCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGN-QVGKLYVWDLEVEDP 321 (366)
T ss_dssp EEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEEC-TTSCEEEEECCSSSG
T ss_pred EEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEe-cCCcEEEEECCCCCC
Confidence 999998763 47788899999999999999 99999999 999999999998753
No 84
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=7.6e-32 Score=225.86 Aligned_cols=236 Identities=13% Similarity=0.177 Sum_probs=169.2
Q ss_pred ceeeeecCCC------------CceeEEEEcCCC--CeEEEecCCCeEEEeeCCCCCCcccccccccc--------ccCC
Q 022019 51 NQFRTSSIPN------------NFLKGIKWSPDG--SSFLTSSEDKTLRIFSLPENGISYDVNACSLA--------KDQD 108 (304)
Q Consensus 51 ~~~~~~~~h~------------~~V~~i~~s~~~--~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~--------~~~~ 108 (304)
+....+.+|. +.|++++|+|++ .+|++++.||+|++||+.++............ ....
T Consensus 72 ~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 151 (447)
T 3dw8_B 72 NVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTT 151 (447)
T ss_dssp EEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCS
T ss_pred eEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccc
Confidence 3455788998 889999999998 79999999999999998754321100000000 0000
Q ss_pred ---------------ccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCC-CeeeEEeecc--ccc
Q 022019 109 ---------------SYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATT-GLLRCTYRAY--DAV 170 (304)
Q Consensus 109 ---------------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~--~~~ 170 (304)
.....+...|...|.+++| +|++++|++| .|+.|++||+++ ++....+... ...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-------~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 223 (447)
T 3dw8_B 152 LRVPVFRPMDLMVEASPRRIFANAHTYHINSISI-------NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANME 223 (447)
T ss_dssp CCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE-------CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGG
T ss_pred eEeccccchheeeeccceEEeccCCCcceEEEEE-------cCCCCEEEEe-CCCeEEEEECCCCCceeeeeeccccccc
Confidence 0000112346677888877 7789999998 799999999984 3333322111 112
Q ss_pred ccccceEEEEECCCC-cEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccccc------------cceeEEEeecCCCc
Q 022019 171 DEITAAFSVAFNPTG-TKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQA------------GIMSAIAFSPTHTG 236 (304)
Q Consensus 171 ~~~~~v~~i~~~~~~-~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~------------~~v~~~~~~p~~~~ 236 (304)
.+...|.+++|+|++ ++|+++ .|+.|++||++...........+ ..|. ..|.+++|+| ++.
T Consensus 224 ~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~ 298 (447)
T 3dw8_B 224 ELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLF----EEPEDPSNRSFFSEIISSISDVKFSH-SGR 298 (447)
T ss_dssp GCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEE----CCC-----CCHHHHHTTCEEEEEECT-TSS
T ss_pred ccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEe----ccCCCccccccccccCceEEEEEECC-CCC
Confidence 344589999999998 888865 99999999998753211111222 3333 3899999999 788
Q ss_pred EEEEEecCCeEEEEecCC-ceEeEEeccccCC---------------eEEEEECCCCcEEEEeeccCCeEEEEeccccee
Q 022019 237 MLAIGSYSQTSAIYREDN-MELLYVLHGQEGG---------------VTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQ 300 (304)
Q Consensus 237 ~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~---------------v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~ 300 (304)
+|++++. +.|++||++. ++++..+.+|... +..++|+|++++|++++ .||.|++||+.+++.
T Consensus 299 ~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s-~dg~v~iwd~~~~~~ 376 (447)
T 3dw8_B 299 YMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGS-YNNFFRMFDRNTKRD 376 (447)
T ss_dssp EEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEEC-STTEEEEEETTTCCE
T ss_pred EEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEec-cCCEEEEEEcCCCcc
Confidence 9999998 9999999997 8888888888642 33499999999999999 999999999998876
Q ss_pred e
Q 022019 301 V 301 (304)
Q Consensus 301 ~ 301 (304)
+
T Consensus 377 ~ 377 (447)
T 3dw8_B 377 I 377 (447)
T ss_dssp E
T ss_pred e
Confidence 4
No 85
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.6e-30 Score=233.27 Aligned_cols=224 Identities=17% Similarity=0.275 Sum_probs=183.6
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEE
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (304)
.+..|+....... ..+.+|.+.|++++|+|++++|++++.||.|++||+.++... ..
T Consensus 36 ~v~iwd~~~~~~~------~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~-----------------~~ 92 (814)
T 3mkq_A 36 RVEIWNYETQVEV------RSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKV-----------------VD 92 (814)
T ss_dssp EEEEEETTTTEEE------EEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEE-----------------EE
T ss_pred EEEEEECCCCceE------EEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEE-----------------EE
Confidence 4556776655433 367799999999999999999999999999999999865432 12
Q ss_pred EeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCC-eeeEEeecccccccccceEEEEECC-CCcEEEEE-
Q 022019 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTG-LLRCTYRAYDAVDEITAAFSVAFNP-TGTKIFAG- 191 (304)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~~~- 191 (304)
...|...|.+++| +|++.+|++++.||.|++||+.++ .....+..+.. .|.+++|+| ++..++++
T Consensus 93 ~~~~~~~v~~~~~-------s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~-----~v~~~~~~p~~~~~l~~~~ 160 (814)
T 3mkq_A 93 FEAHPDYIRSIAV-------HPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEH-----FVMCVAFNPKDPSTFASGC 160 (814)
T ss_dssp EECCSSCEEEEEE-------CSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSS-----CEEEEEEETTEEEEEEEEE
T ss_pred EecCCCCEEEEEE-------eCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCC-----cEEEEEEEcCCCCEEEEEe
Confidence 3446688999988 778999999999999999999886 55566665544 899999999 78888855
Q ss_pred cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecC-CCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEE
Q 022019 192 YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPT-HTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTH 270 (304)
Q Consensus 192 ~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~ 270 (304)
.||.|++||++...... .+. ..+...+.+++|+|. ++.+|++|+.||.|++||+++++++..+.+|...|.+
T Consensus 161 ~dg~v~vwd~~~~~~~~----~~~---~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~ 233 (814)
T 3mkq_A 161 LDRTVKVWSLGQSTPNF----TLT---TGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSF 233 (814)
T ss_dssp TTSEEEEEETTCSSCSE----EEE---CCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEE
T ss_pred CCCeEEEEECCCCccee----EEe---cCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEE
Confidence 99999999997643211 111 334467999999983 4568999999999999999999999999999999999
Q ss_pred EEECCCCcEEEEeeccCCeEEEEecccceee
Q 022019 271 VQFSRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 271 ~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
++|+|+|++|++++ .||.|++||+.+++.+
T Consensus 234 ~~~~~~~~~l~~~~-~dg~v~vwd~~~~~~~ 263 (814)
T 3mkq_A 234 AVFHPTLPIIISGS-EDGTLKIWNSSTYKVE 263 (814)
T ss_dssp EEECSSSSEEEEEE-TTSCEEEEETTTCSEE
T ss_pred EEEcCCCCEEEEEe-CCCeEEEEECCCCcEE
Confidence 99999999999999 9999999999987654
No 86
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-31 Score=221.65 Aligned_cols=236 Identities=17% Similarity=0.283 Sum_probs=179.0
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEE
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (304)
.+..|+......... + ....|...|++++|+|++.+|++++.||.|++||+.+.... ......
T Consensus 46 ~v~iw~~~~~~~~~~---~-~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~-------------~~~~~~ 108 (416)
T 2pm9_A 46 SLELWSLLAADSEKP---I-ASLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNA-------------INSMAR 108 (416)
T ss_dssp CCEEEESSSGGGCSC---S-CCCCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSC-------------CCEEEE
T ss_pred eEEEEEccCCCCCcE---E-EEEecCCceEEEEECCCCCeEEEEccCCeEEEeeccccccc-------------ccchhh
Confidence 456677665543211 1 12358999999999999999999999999999999752110 011223
Q ss_pred EeecCCeEEEEeecCccceeCCC-ccEEEEEeCCCCEEEEEcCCCe------eeEEeecccccccccceEEEEECCC-Cc
Q 022019 115 VVTEGESVYDFCWFPHMSASDPT-SCVFASTTRDHPIHLWDATTGL------LRCTYRAYDAVDEITAAFSVAFNPT-GT 186 (304)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~------~~~~~~~~~~~~~~~~v~~i~~~~~-~~ 186 (304)
...|...|.+++| +|+ +.+|++++.||.|++||+.+++ ....+. ....+...|.+++|+|+ +.
T Consensus 109 ~~~h~~~v~~~~~-------~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~ 179 (416)
T 2pm9_A 109 FSNHSSSVKTVKF-------NAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPG--QSMSSVDEVISLAWNQSLAH 179 (416)
T ss_dssp CCCSSSCCCEEEE-------CSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCC--CSCCSSCCCCEEEECSSCTT
T ss_pred ccCCccceEEEEE-------cCCCCCEEEEEcCCCeEEEEECCCCccccccccccccc--cccCCCCCeeEEEeCCCCCc
Confidence 3456678888888 666 7899999999999999999876 222221 11234448999999999 67
Q ss_pred EEEEE-cCCeEEEEEcCCCCccceeeeeeec--cccccccceeEEEeecCCCcEEEEEecCC---eEEEEecCCc-eEeE
Q 022019 187 KIFAG-YNKSVRVFDVHRPGRDFEKYSTLKG--NKEGQAGIMSAIAFSPTHTGMLAIGSYSQ---TSAIYREDNM-ELLY 259 (304)
Q Consensus 187 ~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~p~~~~~l~~~~~dg---~i~i~d~~~~-~~~~ 259 (304)
+++++ .|+.|++||++... ....+.. ...+|...+.+++|+|++..++++++.|+ .|++||++++ .++.
T Consensus 180 ~l~~~~~dg~v~iwd~~~~~----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~ 255 (416)
T 2pm9_A 180 VFASAGSSNFASIWDLKAKK----EVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQ 255 (416)
T ss_dssp EEEEESSSSCEEEEETTTTE----EEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSB
T ss_pred EEEEEcCCCCEEEEECCCCC----cceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcE
Confidence 88866 99999999998742 1122111 11233678999999996668999999999 9999999986 6778
Q ss_pred Eec-cccCCeEEEEECC-CCcEEEEeeccCCeEEEEecccceee
Q 022019 260 VLH-GQEGGVTHVQFSR-DGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 260 ~~~-~~~~~v~~~~~~~-~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
.+. +|...|++++|+| ++.+|++++ .||.|++||+++++.+
T Consensus 256 ~~~~~~~~~v~~~~~s~~~~~~l~s~~-~dg~v~~wd~~~~~~~ 298 (416)
T 2pm9_A 256 TLNQGHQKGILSLDWCHQDEHLLLSSG-RDNTVLLWNPESAEQL 298 (416)
T ss_dssp CCCSCCSSCEEEEEECSSCSSCEEEEE-SSSEEEEECSSSCCEE
T ss_pred EeecCccCceeEEEeCCCCCCeEEEEe-CCCCEEEeeCCCCccc
Confidence 888 8999999999999 999999999 9999999999988665
No 87
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-31 Score=222.27 Aligned_cols=219 Identities=11% Similarity=0.097 Sum_probs=165.0
Q ss_pred CCCCceeEEEEcCCCCeEEEecCCCeEEEeeCC---CCCCccccccccccccCCccceEEEee---cCCeEEEEeecCcc
Q 022019 58 IPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLP---ENGISYDVNACSLAKDQDSYEASLVVT---EGESVYDFCWFPHM 131 (304)
Q Consensus 58 ~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~ 131 (304)
+|.+.|++++|+|++.+|++|+.||+|++||+. ++......... ....+... +...+.++.+
T Consensus 109 ~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~--------~i~~~~~~~~~~~~~~~~~~~---- 176 (437)
T 3gre_A 109 DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCE--------CIRKINLKNFGKNEYAVRMRA---- 176 (437)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEE--------EEEEEEGGGGSSCCCEEEEEE----
T ss_pred cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccc--------eeEEEEccCcccccCceEEEE----
Confidence 599999999999999999999999999999985 22211100000 00001111 2334444443
Q ss_pred ceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCcccee
Q 022019 132 SASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEK 210 (304)
Q Consensus 132 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~ 210 (304)
.+++++.+|++++.||.|++||+++++....+..+. +...|.+++|+|++++|++| .||.|++||++.. ..
T Consensus 177 -~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~----~~ 248 (437)
T 3gre_A 177 -FVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSP---RHGAVSSICIDEECCVLILGTTRGIIDIWDIRFN----VL 248 (437)
T ss_dssp -EECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCG---GGCCEEEEEECTTSCEEEEEETTSCEEEEETTTT----EE
T ss_pred -EEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCC---CCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCc----cE
Confidence 247889999999999999999999999888887621 22389999999999999965 9999999999863 11
Q ss_pred eeeeeccccccccceeEEEeecC---CCcEEEEEecCCeEEEEecCCceEeEEecc------------------------
Q 022019 211 YSTLKGNKEGQAGIMSAIAFSPT---HTGMLAIGSYSQTSAIYREDNMELLYVLHG------------------------ 263 (304)
Q Consensus 211 ~~~~~~~~~~~~~~v~~~~~~p~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~------------------------ 263 (304)
...+. ..|...|.+++|+|. ++.+|++|+.||.|++||+++++++..+.+
T Consensus 249 ~~~~~---~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 325 (437)
T 3gre_A 249 IRSWS---FGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCG 325 (437)
T ss_dssp EEEEB---CTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCC
T ss_pred EEEEe---cCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecc
Confidence 12211 256668999966652 577999999999999999999988877764
Q ss_pred --ccCCeEEEEECCCCcEEEEeeccCCeEEEEecccceee
Q 022019 264 --QEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 264 --~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
|...|++++|+ ++++|++++ .|+.|++||+.+++.+
T Consensus 326 ~~~~~~v~~l~~~-~~~~l~s~~-~d~~i~~wd~~~~~~~ 363 (437)
T 3gre_A 326 IRSLNALSTISVS-NDKILLTDE-ATSSIVMFSLNELSSS 363 (437)
T ss_dssp CCSGGGGCCEEEE-TTEEEEEEG-GGTEEEEEETTCGGGC
T ss_pred cccCCceEEEEEC-CceEEEecC-CCCeEEEEECCCcccc
Confidence 44568888998 779999999 9999999999988654
No 88
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5e-30 Score=204.69 Aligned_cols=217 Identities=12% Similarity=0.187 Sum_probs=173.5
Q ss_pred eeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEE
Q 022019 36 LIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLV 115 (304)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (304)
+..|+....... ..+..|.+.|.+++|+|++++|++++.||.|++|++....... .....
T Consensus 41 v~vw~~~~~~~~------~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~--------------~~~~~ 100 (313)
T 3odt_A 41 VRLWSKDDQWLG------TVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGED--------------PLYTL 100 (313)
T ss_dssp EEEEEESSSEEE------EEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSC--------------C-CEE
T ss_pred EEEEECCCCEEE------EEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCC--------------cccch
Confidence 455555444333 3667899999999999999999999999999999987542211 11133
Q ss_pred eecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECC-CCcEEEEE-cC
Q 022019 116 VTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNP-TGTKIFAG-YN 193 (304)
Q Consensus 116 ~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~~~-~d 193 (304)
..|...+.++.| +++++++++.||.|++|| .++....+..+.. .+.++.|+| ++..++++ .|
T Consensus 101 ~~~~~~i~~~~~---------~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~-----~v~~~~~~~~~~~~l~~~~~d 164 (313)
T 3odt_A 101 IGHQGNVCSLSF---------QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNA-----SVWDAKVVSFSENKFLTASAD 164 (313)
T ss_dssp CCCSSCEEEEEE---------ETTEEEEEETTSEEEEEE--TTEEEEEEECCSS-----CEEEEEEEETTTTEEEEEETT
T ss_pred hhcccCEEEEEe---------cCCEEEEEeCCCCEEEEc--CCcEEEecccCCC-----ceeEEEEccCCCCEEEEEECC
Confidence 456688888887 466899999999999999 5666666666554 899999988 88888855 99
Q ss_pred CeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEE
Q 022019 194 KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQF 273 (304)
Q Consensus 194 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~ 273 (304)
+.|++||... ....+ ...+...+.+++|+| ++. +++++.||.|++||+++++++..+.+|...|++++|
T Consensus 165 ~~i~i~d~~~------~~~~~---~~~~~~~i~~~~~~~-~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~ 233 (313)
T 3odt_A 165 KTIKLWQNDK------VIKTF---SGIHNDVVRHLAVVD-DGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKL 233 (313)
T ss_dssp SCEEEEETTE------EEEEE---CSSCSSCEEEEEEEE-TTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred CCEEEEecCc------eEEEE---eccCcccEEEEEEcC-CCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEE
Confidence 9999999432 11111 133778899999999 665 899999999999999999999999999999999999
Q ss_pred CCCCcEEEEeeccCCeEEEEecccceee
Q 022019 274 SRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 274 ~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
+|++ .|++++ .||.|++||+++++.+
T Consensus 234 ~~~~-~l~~~~-~dg~v~iwd~~~~~~~ 259 (313)
T 3odt_A 234 LPNG-DIVSCG-EDRTVRIWSKENGSLK 259 (313)
T ss_dssp CTTS-CEEEEE-TTSEEEEECTTTCCEE
T ss_pred ecCC-CEEEEe-cCCEEEEEECCCCcee
Confidence 9999 588888 9999999999988654
No 89
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=6.4e-32 Score=222.55 Aligned_cols=218 Identities=13% Similarity=0.070 Sum_probs=151.8
Q ss_pred eeeecCCCCceeEEEEcC--------CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEE
Q 022019 53 FRTSSIPNNFLKGIKWSP--------DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYD 124 (304)
Q Consensus 53 ~~~~~~h~~~V~~i~~s~--------~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 124 (304)
+..+.+|.+.|++++|+| |+++||||+.|++|+|||+.++. .......+...+.+
T Consensus 129 ~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~-----------------~~~~~~~~~~~v~~ 191 (393)
T 4gq1_A 129 LGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEG-----------------PILAGYPLSSPGIS 191 (393)
T ss_dssp ECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTE-----------------EEEEEEECSSCEEE
T ss_pred ecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCc-----------------eeeeecCCCCCcEE
Confidence 346789999999999998 78999999999999999986432 22245567788999
Q ss_pred EeecCccceeCCCc-cEEEEEeCCCCEEEEEcCCCeeeEEeeccc--------------------ccccccceEEEEEC-
Q 022019 125 FCWFPHMSASDPTS-CVFASTTRDHPIHLWDATTGLLRCTYRAYD--------------------AVDEITAAFSVAFN- 182 (304)
Q Consensus 125 ~~~~~~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--------------------~~~~~~~v~~i~~~- 182 (304)
++|+| ++ .+|++++.||+|++||+++++......... ...+...+.++.|+
T Consensus 192 v~~~p-------~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~ 264 (393)
T 4gq1_A 192 VQFRP-------SNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIG 264 (393)
T ss_dssp EEEET-------TEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEET
T ss_pred EEECC-------CCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeec
Confidence 99854 54 589999999999999999876543322110 11244567888886
Q ss_pred CCCcEEEEE-cCCeEEEEEcCCCCccceeeeee------------eccccccccceeEEEeecCCCcEEEEEecCCeEEE
Q 022019 183 PTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTL------------KGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAI 249 (304)
Q Consensus 183 ~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~------------~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i 249 (304)
|+++.++++ .|+.+++||+....... .+... ......+...+..+.+.+.++.++++|+.||.|++
T Consensus 265 ~dg~~l~s~s~d~~i~vwd~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~l 343 (393)
T 4gq1_A 265 SDGSGILAMCKSGAWLRWNLFANNDYN-EISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQL 343 (393)
T ss_dssp TTTCEEEEECTTSEEEEEEC--------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEE
T ss_pred CCCCEEEEEeCCCCEEEEECccCCCCc-eEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEE
Confidence 799999966 99999999997632111 00000 00001111222333333334557778889999999
Q ss_pred EecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEeccc
Q 022019 250 YREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 250 ~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~ 297 (304)
||+.+++++..+.+|..+|.+++|+|||++|++++ .+| +.+|.+..
T Consensus 344 wd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as-~~G-v~lvrL~g 389 (393)
T 4gq1_A 344 INTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIAT-EGS-VLLTRLMG 389 (393)
T ss_dssp EETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEE-SSE-EEEEEEGG
T ss_pred EECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEe-CCC-eEEEEEeC
Confidence 99999988888888999999999999999999998 555 77777654
No 90
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.2e-30 Score=214.48 Aligned_cols=225 Identities=12% Similarity=0.080 Sum_probs=169.1
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcC-CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceE
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSP-DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEAS 113 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~-~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (304)
.+..|+........ .....+|.+.|.+++|+| ++.+|++++.||.|++||+.+... ..
T Consensus 97 ~i~iwd~~~~~~~~----~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~-----------------~~ 155 (383)
T 3ei3_B 97 DIILWDYDVQNKTS----FIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVI-----------------QV 155 (383)
T ss_dssp CEEEEETTSTTCEE----EECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEE-----------------EE
T ss_pred eEEEEeCCCcccce----eeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCce-----------------EE
Confidence 34566665443332 112347999999999999 789999999999999999974211 00
Q ss_pred EE--eecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCc-EEEE
Q 022019 114 LV--VTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGT-KIFA 190 (304)
Q Consensus 114 ~~--~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~~ 190 (304)
+. ..+...+.+++| +|++++|++++.|+.|++||+ +++....+..+.. .|.+++|+|+++ ++++
T Consensus 156 ~~~~~~~~~~v~~~~~-------~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~-----~v~~~~~~~~~~~~l~s 222 (383)
T 3ei3_B 156 FAKTDSWDYWYCCVDV-------SVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKA-----KVTHAEFNPRCDWLMAT 222 (383)
T ss_dssp EECCCCSSCCEEEEEE-------ETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSS-----CEEEEEECSSCTTEEEE
T ss_pred EeccCCCCCCeEEEEE-------CCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCC-----cEEEEEECCCCCCEEEE
Confidence 11 112366888887 678999999999999999999 4666677765554 899999999998 7775
Q ss_pred E-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEecccc----
Q 022019 191 G-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQE---- 265 (304)
Q Consensus 191 ~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---- 265 (304)
+ .|+.|++||++........... .+|...|.+++|+|.++.+|++++.|+.|++||+++++.+..+.+|.
T Consensus 223 ~~~d~~i~iwd~~~~~~~~~~~~~-----~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 297 (383)
T 3ei3_B 223 SSVDATVKLWDLRNIKDKNSYIAE-----MPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQF 297 (383)
T ss_dssp EETTSEEEEEEGGGCCSTTCEEEE-----EECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCC
T ss_pred EeCCCEEEEEeCCCCCcccceEEE-----ecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccccccccccc
Confidence 5 9999999999874322222222 24778899999999556689999999999999999887766665443
Q ss_pred -------------CCeEEEEECCCCcEEEEeeccCCeEEEEecccceee
Q 022019 266 -------------GGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 266 -------------~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
..+..++|+|+|++ +++ .|+.|++||+.+++.+
T Consensus 298 ~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s-~d~~i~iwd~~~~~~~ 343 (383)
T 3ei3_B 298 QHLTPIKATWHPMYDLIVAGRYPDDQL--LLN-DKRTIDIYDANSGGLV 343 (383)
T ss_dssp TTSCCCCCEECSSSSEEEEECBCCTTT--CTT-CCCCEEEEETTTCCEE
T ss_pred ccccceEEeccCCCCceEEEecCCccc--ccC-CCCeEEEEecCCCcee
Confidence 34455677777776 677 8999999999988764
No 91
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=2.1e-30 Score=211.36 Aligned_cols=158 Identities=11% Similarity=0.050 Sum_probs=128.3
Q ss_pred cceeCCCccEEEEE--eCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccc
Q 022019 131 MSASDPTSCVFAST--TRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDF 208 (304)
Q Consensus 131 ~~~~~~~~~~l~~~--~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~ 208 (304)
.++|+|||++++++ +.|++|++||+.+++....+.... .|.+++|+|+|++++++.++.+.+|+...+..
T Consensus 138 ~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~------~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~-- 209 (365)
T 4h5i_A 138 LVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRG------EVKDLHFSTDGKVVAYITGSSLEVISTVTGSC-- 209 (365)
T ss_dssp EEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSS------CCCEEEECTTSSEEEEECSSCEEEEETTTCCE--
T ss_pred EEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCC------ceEEEEEccCCceEEeccceeEEEEEeccCcc--
Confidence 35679999997655 478999999999998887765322 79999999999999988777888888776422
Q ss_pred eeeeeeeccccccccceeEEEeecCCCcEEEEEecCC----eEEEEecCCceE----eEEeccccCCeEEEEECCCCcEE
Q 022019 209 EKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQ----TSAIYREDNMEL----LYVLHGQEGGVTHVQFSRDGNYL 280 (304)
Q Consensus 209 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg----~i~i~d~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l 280 (304)
........|...+.+++|+| ++.++++++.|+ .+++|++..... ...+.+|...|++++|+|||++|
T Consensus 210 ----~~~~~~~~~~~~v~~v~fsp-dg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~l 284 (365)
T 4h5i_A 210 ----IARKTDFDKNWSLSKINFIA-DDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELA 284 (365)
T ss_dssp ----EEEECCCCTTEEEEEEEEEE-TTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEE
T ss_pred ----eeeeecCCCCCCEEEEEEcC-CCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCce
Confidence 11122356778899999999 778899998887 688899876543 45677899999999999999999
Q ss_pred EEeeccCCeEEEEecccceeee
Q 022019 281 YTGGRKDPYILCWDLRKAVQVV 302 (304)
Q Consensus 281 ~~~~~~d~~i~vwd~~~~~~~~ 302 (304)
++|+ .|++|+|||+++++.+.
T Consensus 285 asgs-~D~~V~iwd~~~~~~~~ 305 (365)
T 4h5i_A 285 VLAS-NDNSIALVKLKDLSMSK 305 (365)
T ss_dssp EEEE-TTSCEEEEETTTTEEEE
T ss_pred EEEc-CCCEEEEEECCCCcEEE
Confidence 9999 99999999999988763
No 92
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.98 E-value=1.2e-30 Score=204.28 Aligned_cols=218 Identities=16% Similarity=0.077 Sum_probs=141.0
Q ss_pred ceeEEEEcCC----CCeEEEecCCCeEEEeeCCCCCCccccc-cc-----cccccCCccceEEEeecCCeEEEEeecCcc
Q 022019 62 FLKGIKWSPD----GSSFLTSSEDKTLRIFSLPENGISYDVN-AC-----SLAKDQDSYEASLVVTEGESVYDFCWFPHM 131 (304)
Q Consensus 62 ~V~~i~~s~~----~~~l~s~~~dg~v~vwd~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 131 (304)
.|..++|+|+ +.++++++. .+++|++.+++...... .+ ......+.........|...+..++|.|.
T Consensus 113 ~v~sla~spd~~~~~~~l~s~g~--~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~- 189 (356)
T 2w18_A 113 EIRALFCSSDDESEKQVLLKSGN--IKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEV- 189 (356)
T ss_dssp EEEEECC------CCEEEEEEEE--EEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEE-
T ss_pred ceEEEEECCCccccccEEEeCCC--eEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeecc-
Confidence 5667777777 778887764 36677775544322100 00 00000111111122233344444444221
Q ss_pred ceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE------------EE-cCCeEEE
Q 022019 132 SASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF------------AG-YNKSVRV 198 (304)
Q Consensus 132 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~------------~~-~d~~i~v 198 (304)
..++..|++++.|++|+|||+.+++.+.++..+.. +...+.+++|+|+|.+++ +| .|++|++
T Consensus 190 ---~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~--~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIkl 264 (356)
T 2w18_A 190 ---QGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDS--YQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIV 264 (356)
T ss_dssp ---ETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC-----CCCEEEEEEETTEEEEEEC------------CCEEEEE
T ss_pred ---CCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCc--ceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEE
Confidence 22778999999999999999999999998875432 223678889999998873 34 7899999
Q ss_pred EEcCCCCccceeeeeeec-cccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeE-EEEECCC
Q 022019 199 FDVHRPGRDFEKYSTLKG-NKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVT-HVQFSRD 276 (304)
Q Consensus 199 ~d~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~-~~~~~~~ 276 (304)
||..++ ... ..+.. ...+|...+.+..++ +.++++|+.|++|+|||+.+++++.++.+|...+. .++|+||
T Consensus 265 Wd~~tg-k~l---~v~~~~~p~Gh~~~~lsg~~s---g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPD 337 (356)
T 2w18_A 265 INPKTT-LSV---GVMLYCLPPGQAGRFLEGDVK---DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGT 337 (356)
T ss_dssp EETTTT-EEE---EEEEECCCTTCCCCEEEEEEE---TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSS
T ss_pred EECCCC-EEE---EEEEeeccCCCcceeEccccC---CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCC
Confidence 999763 111 11110 123554444333333 55899999999999999999999999999987655 5899999
Q ss_pred CcEEEEeeccCCeEEEEec
Q 022019 277 GNYLYTGGRKDPYILCWDL 295 (304)
Q Consensus 277 ~~~l~~~~~~d~~i~vwd~ 295 (304)
|++|++|+ .|++|+|||+
T Consensus 338 G~~LaSGS-~D~TIklWd~ 355 (356)
T 2w18_A 338 DSHLLAGQ-KDGNIFVYHY 355 (356)
T ss_dssp SSEEEEEC-TTSCEEEEEE
T ss_pred CCEEEEEE-CCCcEEEecC
Confidence 99999999 9999999996
No 93
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.98 E-value=2.6e-30 Score=215.55 Aligned_cols=218 Identities=17% Similarity=0.290 Sum_probs=168.4
Q ss_pred eecCCCCceeEEEEcCC-CCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccce
Q 022019 55 TSSIPNNFLKGIKWSPD-GSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSA 133 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~-~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 133 (304)
...+|.+.|++++|+|+ +.+|++++.||.|++|++.+...... .............|...+.+++|
T Consensus 123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~-------~~~~~~~~~~~~~h~~~v~~l~~------ 189 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPE-------PSGECQPDLRLRGHQKEGYGLSW------ 189 (430)
T ss_dssp EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCC-------TTCCCCCSEEEECCSSCCCCEEE------
T ss_pred EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccC-------ccccCCCcEEecCCCCCeEEEEe------
Confidence 45679999999999997 77999999999999999975321110 00011222344567778888888
Q ss_pred eCCCcc-EEEEEeCCCCEEEEEcCCCee-------eEEeecccccccccceEEEEECC-CCcEEEEE-cCCeEEEEEcCC
Q 022019 134 SDPTSC-VFASTTRDHPIHLWDATTGLL-------RCTYRAYDAVDEITAAFSVAFNP-TGTKIFAG-YNKSVRVFDVHR 203 (304)
Q Consensus 134 ~~~~~~-~l~~~~~dg~i~i~d~~~~~~-------~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~~~-~d~~i~v~d~~~ 203 (304)
+|++. +|++|+.||.|++||+..+.. ...+.. +...|.+++|+| ++.+++++ .|+.|++||++.
T Consensus 190 -~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~-----h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~ 263 (430)
T 2xyi_A 190 -NPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTG-----HTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRN 263 (430)
T ss_dssp -CTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECC-----CSSCEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred -CCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecC-----CCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCC
Confidence 66776 999999999999999987432 122333 334899999999 66777755 999999999987
Q ss_pred CCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCC-ceEeEEeccccCCeEEEEECCCCc-EEE
Q 022019 204 PGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN-MELLYVLHGQEGGVTHVQFSRDGN-YLY 281 (304)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~-~l~ 281 (304)
.... ..... ...|...|++++|+|++..+|++|+.||.|++||+++ ..++..+.+|...|++++|+|+++ +|+
T Consensus 264 ~~~~-~~~~~----~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~ 338 (430)
T 2xyi_A 264 NNTS-KPSHT----VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILA 338 (430)
T ss_dssp SCSS-SCSEE----EECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEE
T ss_pred CCCC-cceeE----eecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEE
Confidence 4211 11111 1467788999999996666899999999999999998 567888999999999999999995 688
Q ss_pred EeeccCCeEEEEeccc
Q 022019 282 TGGRKDPYILCWDLRK 297 (304)
Q Consensus 282 ~~~~~d~~i~vwd~~~ 297 (304)
+++ .||.|++||++.
T Consensus 339 s~~-~d~~i~iwd~~~ 353 (430)
T 2xyi_A 339 SSG-TDRRLHVWDLSK 353 (430)
T ss_dssp EEE-TTSCCEEEEGGG
T ss_pred EEe-CCCcEEEEeCCC
Confidence 888 999999999987
No 94
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.98 E-value=6.9e-30 Score=215.08 Aligned_cols=212 Identities=15% Similarity=0.308 Sum_probs=170.0
Q ss_pred eeecCCCCce-eEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccc
Q 022019 54 RTSSIPNNFL-KGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMS 132 (304)
Q Consensus 54 ~~~~~h~~~V-~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 132 (304)
..+.+|.+.| .++.+ ++++|++|+.||+|++||+.+++.. .....|...|.+++|
T Consensus 115 ~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~-----------------~~~~~h~~~V~~l~~----- 170 (464)
T 3v7d_B 115 TTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFL-----------------LQLSGHDGGVWALKY----- 170 (464)
T ss_dssp EEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEE-----------------EEECCCSSCEEEEEE-----
T ss_pred EEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEE-----------------EEEeCCCcCEEEEEE-----
Confidence 4678998885 66666 5679999999999999999865332 123357789999988
Q ss_pred eeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEEC--CCCcEEEEE-cCCeEEEEEcCCCCccce
Q 022019 133 ASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFN--PTGTKIFAG-YNKSVRVFDVHRPGRDFE 209 (304)
Q Consensus 133 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~--~~~~~l~~~-~d~~i~v~d~~~~~~~~~ 209 (304)
++++ .+++|+.||+|++||+++++....+..+.. .|.+++|+ +++.+++++ .|+.|++||++.......
T Consensus 171 --~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~-----~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~ 242 (464)
T 3v7d_B 171 --AHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNS-----TVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPD 242 (464)
T ss_dssp --CSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSS-----CEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC--
T ss_pred --cCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCC-----ccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCccccc
Confidence 5555 899999999999999999998888876654 89999998 577888865 999999999987432211
Q ss_pred eeee---------------eeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEEC
Q 022019 210 KYST---------------LKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFS 274 (304)
Q Consensus 210 ~~~~---------------~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~ 274 (304)
.... ......+|...+.++ +| ++.++++|+.||.|++||+++++++..+.+|...|.+++|+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~ 319 (464)
T 3v7d_B 243 HGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SG-HGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYD 319 (464)
T ss_dssp ----CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EE-ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE
T ss_pred ccccCCcceEeeccCCCeEEEEEccCccceEEEE--cC-CCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEc
Confidence 0000 112235677777766 55 56699999999999999999999999999999999999999
Q ss_pred CCCcEEEEeeccCCeEEEEecccceee
Q 022019 275 RDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 275 ~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
|++++|++++ .||.|++||+++++.+
T Consensus 320 ~~~~~l~sg~-~dg~i~vwd~~~~~~~ 345 (464)
T 3v7d_B 320 HERKRCISAS-MDTTIRIWDLENGELM 345 (464)
T ss_dssp TTTTEEEEEE-TTSCEEEEETTTTEEE
T ss_pred CCCCEEEEEe-CCCcEEEEECCCCcEE
Confidence 9999999999 9999999999998765
No 95
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.98 E-value=5.7e-31 Score=233.58 Aligned_cols=214 Identities=18% Similarity=0.249 Sum_probs=171.4
Q ss_pred eeeecCCCCceeEEEEcCC--CCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCc
Q 022019 53 FRTSSIPNNFLKGIKWSPD--GSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPH 130 (304)
Q Consensus 53 ~~~~~~h~~~V~~i~~s~~--~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 130 (304)
...+.+|.+.|++++|+|+ +++|++|+.||.|++||+.++.. ........|...|.+++|
T Consensus 46 ~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~---------------~~~~~~~~h~~~V~~v~~--- 107 (753)
T 3jro_A 46 IDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRW---------------SQIAVHAVHSASVNSVQW--- 107 (753)
T ss_dssp EEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEE---------------EEEEEECCCSSCEEEEEE---
T ss_pred ceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcc---------------cccccccCCCCCeEEEEE---
Confidence 4477899999999999987 99999999999999999875421 112233456788999988
Q ss_pred cceeCCC--ccEEEEEeCCCCEEEEEcCCCeee--EEeecccccccccceEEEEECC-------------CCcEEEEE-c
Q 022019 131 MSASDPT--SCVFASTTRDHPIHLWDATTGLLR--CTYRAYDAVDEITAAFSVAFNP-------------TGTKIFAG-Y 192 (304)
Q Consensus 131 ~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~~~~~~~v~~i~~~~-------------~~~~l~~~-~ 192 (304)
+|+ +..+++|+.||.|++||++++... ..+..+ ...|.++.|+| ++..+++| .
T Consensus 108 ----sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~-----~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~ 178 (753)
T 3jro_A 108 ----APHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAH-----AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA 178 (753)
T ss_dssp ----CCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECC-----SSCEEEEEECCCC---------CGGGCCEEEEET
T ss_pred ----CCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecC-----CCceEEEEecCcccccccccccCCCCCEEEEEEC
Confidence 556 889999999999999999887432 233333 33899999999 47888865 9
Q ss_pred CCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCC--CcEEEEEecCCeEEEEecCCce-----EeEEecccc
Q 022019 193 NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTH--TGMLAIGSYSQTSAIYREDNME-----LLYVLHGQE 265 (304)
Q Consensus 193 d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~--~~~l~~~~~dg~i~i~d~~~~~-----~~~~~~~~~ 265 (304)
||.|++||++........ .....+|...|.+++|+|++ +.++++|+.||.|++||++++. .......|.
T Consensus 179 dg~I~iwd~~~~~~~~~~----~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~ 254 (753)
T 3jro_A 179 DNLVKIWKYNSDAQTYVL----ESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFP 254 (753)
T ss_dssp TSCEEEEEEETTTTEEEE----EEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCS
T ss_pred CCeEEEEeccCCccccee----eeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCC
Confidence 999999999875433222 22336788999999999943 8899999999999999998864 333445688
Q ss_pred CCeEEEEECCCCcEEEEeeccCCeEEEEecccc
Q 022019 266 GGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 266 ~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~ 298 (304)
..|++++|+|+|.+|++++ .||.|++|+++++
T Consensus 255 ~~v~~l~~spdg~~l~s~s-~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 255 DVLWRASWSLSGNVLALSG-GDNKVTLWKENLE 286 (753)
T ss_dssp SCCCCEEECTTTCCEEEEC-SSSCEECCBCCSS
T ss_pred CceEEEEEcCCCCEEEEEc-CCCEEEEEecCCC
Confidence 8999999999999999999 9999999999854
No 96
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.98 E-value=2.3e-30 Score=215.29 Aligned_cols=224 Identities=10% Similarity=0.102 Sum_probs=161.2
Q ss_pred CCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCcc----ccccccccccC---------CccceEEEeecCCeEEE
Q 022019 58 IPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISY----DVNACSLAKDQ---------DSYEASLVVTEGESVYD 124 (304)
Q Consensus 58 ~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~----~~~~~~~~~~~---------~~~~~~~~~~~~~~v~~ 124 (304)
.-...|.+++|+|||+++||++.|++|+ |........ .+....+.+.. ..........+...|.+
T Consensus 13 ~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~ 90 (588)
T 2j04_A 13 EFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRV 90 (588)
T ss_dssp CCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEE
T ss_pred HhhccEEEEEECCCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEE
Confidence 4467899999999999999999999999 654443220 00001000000 00001112233567888
Q ss_pred EeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCC
Q 022019 125 FCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHR 203 (304)
Q Consensus 125 ~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~ 203 (304)
++| +|+|.+||+++.||.|++||... ....+. +...-....+.+++|||+|++|++| .||+|++||+..
T Consensus 91 vaw-------SPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~ 160 (588)
T 2j04_A 91 CKP-------SPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRK 160 (588)
T ss_dssp EEE-------CSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCC
T ss_pred EEE-------CCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCC
Confidence 877 88999999999999999999543 444444 3321122359999999999999965 999999999986
Q ss_pred CCc---cceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceE---eEEe-ccccCCeEEEEECCC
Q 022019 204 PGR---DFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMEL---LYVL-HGQEGGVTHVQFSRD 276 (304)
Q Consensus 204 ~~~---~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~---~~~~-~~~~~~v~~~~~~~~ 276 (304)
+.. .+-.+..+.....+|...|.+++|+| ++ +++++.|+.|++||+..+.. ..++ .+|...|.+++|+
T Consensus 161 ~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSP-dg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs-- 235 (588)
T 2j04_A 161 NSENTPEFYFESSIRLSDAGSKDWVTHIVWYE-DV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV-- 235 (588)
T ss_dssp CTTTCCCCEEEEEEECSCTTCCCCEEEEEEET-TE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--
T ss_pred CccccccceeeeeeecccccccccEEEEEEcC-Cc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--
Confidence 421 11123444444467889999999999 56 78899999999999987763 3566 4788899999999
Q ss_pred CcEEEEeeccCCeEEEEeccccee
Q 022019 277 GNYLYTGGRKDPYILCWDLRKAVQ 300 (304)
Q Consensus 277 ~~~l~~~~~~d~~i~vwd~~~~~~ 300 (304)
|..|++++ +++|++||+.+++.
T Consensus 236 g~~LASa~--~~tIkLWd~~~~~~ 257 (588)
T 2j04_A 236 DYKVVLTC--PGYVHKIDLKNYSI 257 (588)
T ss_dssp TTEEEEEC--SSEEEEEETTTTEE
T ss_pred CCEEEEEe--CCeEEEEECCCCeE
Confidence 68899887 59999999998876
No 97
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.98 E-value=1.3e-30 Score=212.65 Aligned_cols=222 Identities=17% Similarity=0.233 Sum_probs=164.0
Q ss_pred eeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccce
Q 022019 54 RTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSA 133 (304)
Q Consensus 54 ~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 133 (304)
..+.+|.+.|++++|+|++++|++++.||.|++||+.++.. .....|...|.+++|.+
T Consensus 80 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~------------------~~~~~~~~~v~~~~~~~---- 137 (368)
T 3mmy_A 80 KAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQA------------------IQIAQHDAPVKTIHWIK---- 137 (368)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE------------------EEEEECSSCEEEEEEEE----
T ss_pred EEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCc------------------eeeccccCceEEEEEEe----
Confidence 36778999999999999999999999999999999985532 13445778999998844
Q ss_pred eCCCccEEEEEeCCCCEEEEEcCCCeeeEEeeccccc------------------------------------ccccceE
Q 022019 134 SDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAV------------------------------------DEITAAF 177 (304)
Q Consensus 134 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~------------------------------------~~~~~v~ 177 (304)
++++.+|++++.||.|++||+++++....+..+... .....+.
T Consensus 138 -~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 216 (368)
T 3mmy_A 138 -APNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHR 216 (368)
T ss_dssp -CSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEE
T ss_pred -CCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCc
Confidence 678899999999999999999988776665543210 0011233
Q ss_pred EEEECCCCc----EEEE-EcCCeEEEEEcCCCCccceeeeeeec--------cccccccceeEEEeecCCCcEEEEEecC
Q 022019 178 SVAFNPTGT----KIFA-GYNKSVRVFDVHRPGRDFEKYSTLKG--------NKEGQAGIMSAIAFSPTHTGMLAIGSYS 244 (304)
Q Consensus 178 ~i~~~~~~~----~l~~-~~d~~i~v~d~~~~~~~~~~~~~~~~--------~~~~~~~~v~~~~~~p~~~~~l~~~~~d 244 (304)
++.+.++.. .+++ +.|+.|++||++..... .....+.. ...+|...|.+++|+| ++.+|++|+.|
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~s~~~d 294 (368)
T 3mmy_A 217 CVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPA-KDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHP-VHGTLATVGSD 294 (368)
T ss_dssp EEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHH-HHSEEEECSEEC----CCCEEECCEEEEEECT-TTCCEEEEETT
T ss_pred eEEEcccCCCCCCeEEEecCCCcEEEEecCCCCcc-ccceeeeeeecccccccccccccceEEEEEec-CCCEEEEEccC
Confidence 444443332 2564 59999999999864220 11111111 0112223799999999 77799999999
Q ss_pred CeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEE---ecccceee
Q 022019 245 QTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCW---DLRKAVQV 301 (304)
Q Consensus 245 g~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vw---d~~~~~~~ 301 (304)
|.|++||+++++++..+.+|...|++++|+|+|++|++++ .|+..+.| +......+
T Consensus 295 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s-~d~~~~~~~~~~~~~~~~i 353 (368)
T 3mmy_A 295 GRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYAS-SYDWSKGHEFYNPQKKNYI 353 (368)
T ss_dssp SCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEE-CCCSTTCGGGCCTTSCCEE
T ss_pred CeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEe-cccccccccccCCCcccee
Confidence 9999999999999999999999999999999999999999 77754444 44444443
No 98
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.97 E-value=1.6e-30 Score=210.27 Aligned_cols=206 Identities=16% Similarity=0.196 Sum_probs=166.5
Q ss_pred eecCCCCceeEEEEcCCCC-eEEEecCCCeEEEeeC-CCCCCccccccccccccCCccceEEEee--cCCeEEEEeecCc
Q 022019 55 TSSIPNNFLKGIKWSPDGS-SFLTSSEDKTLRIFSL-PENGISYDVNACSLAKDQDSYEASLVVT--EGESVYDFCWFPH 130 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~-~l~s~~~dg~v~vwd~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~ 130 (304)
...+|...|++++|+|+++ +|++|+.||.|++||+ .++.. ..... |...|.+++|
T Consensus 51 ~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~------------------~~~~~~~~~~~v~~l~~--- 109 (342)
T 1yfq_A 51 QSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF------------------QALTNNEANLGICRICK--- 109 (342)
T ss_dssp EEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE------------------EECBSCCCCSCEEEEEE---
T ss_pred eeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce------------------EeccccCCCCceEEEEe---
Confidence 4458999999999999999 9999999999999999 75432 12233 6688999988
Q ss_pred cceeCCCccEEEEEeCCCCEEEEEcCC---------CeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEc
Q 022019 131 MSASDPTSCVFASTTRDHPIHLWDATT---------GLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDV 201 (304)
Q Consensus 131 ~~~~~~~~~~l~~~~~dg~i~i~d~~~---------~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~ 201 (304)
+| +.+|++++.|+.|++||+++ ++....+. +...|.+++|+|++ +++++.|+.|++||+
T Consensus 110 ----~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~-l~~~~~d~~i~i~d~ 177 (342)
T 1yfq_A 110 ----YG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK------VKNKIFTMDTNSSR-LIVGMNNSQVQWFRL 177 (342)
T ss_dssp ----ET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS------SCCCEEEEEECSSE-EEEEESTTEEEEEES
T ss_pred ----CC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe------eCCceEEEEecCCc-EEEEeCCCeEEEEEC
Confidence 66 77999999999999999986 55444433 23389999999987 333559999999999
Q ss_pred CC-CCccceeeeeeeccccccccceeEEEeec-CCCcEEEEEecCCeEEEEecCCc------eEeEEeccccC-------
Q 022019 202 HR-PGRDFEKYSTLKGNKEGQAGIMSAIAFSP-THTGMLAIGSYSQTSAIYREDNM------ELLYVLHGQEG------- 266 (304)
Q Consensus 202 ~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~l~~~~~dg~i~i~d~~~~------~~~~~~~~~~~------- 266 (304)
+. ....... ....+...+.+++|+| + +.++++++.||.|++|+++.. ++...+..|..
T Consensus 178 ~~~~~~~~~~------~~~~~~~~i~~i~~~~~~-~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (342)
T 1yfq_A 178 PLCEDDNGTI------EESGLKYQIRDVALLPKE-QEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNL 250 (342)
T ss_dssp SCCTTCCCEE------EECSCSSCEEEEEECSGG-GCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSS
T ss_pred Ccccccccee------eecCCCCceeEEEECCCC-CCEEEEEecCCcEEEEEEcCCCcccccccceeeeccccccccccc
Confidence 86 4322211 1145667799999999 5 458999999999999999876 77788888765
Q ss_pred --CeEEEEECCCCcEEEEeeccCCeEEEEecccceee
Q 022019 267 --GVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 267 --~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
.|.+++|+|++++|++++ .||.|++||+.+++.+
T Consensus 251 ~~~i~~~~~s~~~~~l~~~~-~dg~i~vwd~~~~~~~ 286 (342)
T 1yfq_A 251 AYPVNSIEFSPRHKFLYTAG-SDGIISCWNLQTRKKI 286 (342)
T ss_dssp CCCEEEEEECTTTCCEEEEE-TTSCEEEEETTTTEEE
T ss_pred ceeEEEEEEcCCCCEEEEec-CCceEEEEcCccHhHh
Confidence 999999999999999999 9999999999988765
No 99
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.97 E-value=1.5e-29 Score=220.01 Aligned_cols=232 Identities=13% Similarity=0.157 Sum_probs=180.0
Q ss_pred ceeeecCCCcccccccceeeeecCCCCc-eeEEEEcC--CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccc
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNF-LKGIKWSP--DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYE 111 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~-V~~i~~s~--~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~ 111 (304)
.+..|++...... ......+.+|.+. |++++|+| ++++|++|+.||.|++||+.++...... ....
T Consensus 40 ~v~v~~~~~~~~~--~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~---------~~~~ 108 (615)
T 1pgu_A 40 SAFVRCLDDGDSK--VPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSV---------EVNV 108 (615)
T ss_dssp EEEEEECCSSCCS--SCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEE---------EEEE
T ss_pred eEEEEECCCCCCc--cccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccc---------cccc
Confidence 4566776644110 0233478899999 99999999 9999999999999999999643110000 0011
Q ss_pred eEEEeecCCeEEEEeecCccceeCCCccEEEEEeCC----CCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCc-
Q 022019 112 ASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRD----HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGT- 186 (304)
Q Consensus 112 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~- 186 (304)
......+...|.+++| +|++++|++++.+ +.|++|| .++....+..+.. .|.+++|+|+++
T Consensus 109 ~~~~~~~~~~v~~~~~-------s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~-----~v~~~~~~~~~~~ 174 (615)
T 1pgu_A 109 KSEFQVLAGPISDISW-------DFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQ-----RINACHLKQSRPM 174 (615)
T ss_dssp EEEEECCSSCEEEEEE-------CTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSS-----CEEEEEECSSSSC
T ss_pred cchhhcccccEEEEEE-------eCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCc-----cEEEEEECCCCCc
Confidence 1123346678888888 7799999999987 6788887 5666666665544 899999999997
Q ss_pred EEEEE-cCCeEEEEEcCCCCccceeeeeeecccccccc---ceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEe-
Q 022019 187 KIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAG---IMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVL- 261 (304)
Q Consensus 187 ~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~- 261 (304)
.++++ .|+.|++||++.. .......+|.. .|.+++|+|+++.+|++++.||.|++||+++++++..+
T Consensus 175 ~l~~~~~d~~v~vwd~~~~--------~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 246 (615)
T 1pgu_A 175 RSMTVGDDGSVVFYQGPPF--------KFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIE 246 (615)
T ss_dssp EEEEEETTTEEEEEETTTB--------EEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECC
T ss_pred EEEEEeCCCcEEEEeCCCc--------ceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEec
Confidence 66654 9999999998762 12222356777 89999999942889999999999999999999999999
Q ss_pred c---cccCCeEEEEECCCCcEEEEeeccCCeEEEEecccceee
Q 022019 262 H---GQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 262 ~---~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
. .|...|.+++|+ ++.+|++++ .|+.|++||+++++.+
T Consensus 247 ~~~~~~~~~v~~~~~~-~~~~l~~~~-~d~~i~~wd~~~~~~~ 287 (615)
T 1pgu_A 247 DDQEPVQGGIFALSWL-DSQKFATVG-ADATIRVWDVTTSKCV 287 (615)
T ss_dssp BTTBCCCSCEEEEEES-SSSEEEEEE-TTSEEEEEETTTTEEE
T ss_pred ccccccCCceEEEEEc-CCCEEEEEc-CCCcEEEEECCCCcEE
Confidence 6 899999999999 999999999 9999999999988654
No 100
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.97 E-value=1.1e-29 Score=237.30 Aligned_cols=208 Identities=16% Similarity=0.260 Sum_probs=174.6
Q ss_pred eecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
.+.+|.+.|++++|+|+|++|++|+.||+|++||+.++.... ....|...|.+++|
T Consensus 610 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~-----------------~~~~h~~~v~~~~~------- 665 (1249)
T 3sfz_A 610 VVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLL-----------------DIKAHEDEVLCCAF------- 665 (1249)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE-----------------EECCCSSCEEEEEE-------
T ss_pred EEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEE-----------------EeccCCCCEEEEEE-------
Confidence 678999999999999999999999999999999998654321 23356688999988
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCC--CcEEEEE-cCCeEEEEEcCCCCccceee
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPT--GTKIFAG-YNKSVRVFDVHRPGRDFEKY 211 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~--~~~l~~~-~d~~i~v~d~~~~~~~~~~~ 211 (304)
+|+++++++++.||.|++||+.+++....+..+.. .|.+++|+|+ +.++++| .|+.|++||++++.
T Consensus 666 s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~------ 734 (1249)
T 3sfz_A 666 SSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSE-----QVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE------ 734 (1249)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSS-----CEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS------
T ss_pred ecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCC-----cEEEEEEecCCCceEEEEEeCCCeEEEEECCCcc------
Confidence 77999999999999999999999999888887665 8999999994 4567755 99999999998742
Q ss_pred eeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEec-----------------------------
Q 022019 212 STLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH----------------------------- 262 (304)
Q Consensus 212 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~----------------------------- 262 (304)
......+|...|.+++|+| ++.++++|+.||.|++||+++++....+.
T Consensus 735 --~~~~~~~h~~~v~~~~~sp-~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~ 811 (1249)
T 3sfz_A 735 --CRNTMFGHTNSVNHCRFSP-DDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGD 811 (1249)
T ss_dssp --EEEEECCCSSCEEEEEECS-STTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSS
T ss_pred --hhheecCCCCCEEEEEEec-CCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCC
Confidence 1122257888999999999 77899999999999999998765443321
Q ss_pred --------------------------cccCCeEEEEECCCCcEEEEeeccCCeEEEEecccceee
Q 022019 263 --------------------------GQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 263 --------------------------~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
+|...|.+++|+|++.++++++ .||.|++||+.++..+
T Consensus 812 ~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~dg~v~vwd~~~~~~~ 875 (1249)
T 3sfz_A 812 KIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIAL-SQYCVELWNIDSRLKV 875 (1249)
T ss_dssp EEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEEC-SSSCEEEEETTTTEEE
T ss_pred EEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEe-CCCeEEEEEcCCCcee
Confidence 5677899999999999999999 9999999999987654
No 101
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.97 E-value=2.5e-29 Score=234.87 Aligned_cols=227 Identities=19% Similarity=0.244 Sum_probs=184.6
Q ss_pred eeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEE
Q 022019 36 LIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLV 115 (304)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (304)
+..|+...... +..+.+|.+.|++++|+|+|++|++|+.||.|++||+.++... ...
T Consensus 639 i~vw~~~~~~~------~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~-----------------~~~ 695 (1249)
T 3sfz_A 639 LQVFKAETGEK------LLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLV-----------------HTY 695 (1249)
T ss_dssp EEEEETTTCCE------EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE-----------------EEE
T ss_pred EEEEECCCCCE------EEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceE-----------------EEE
Confidence 44555554433 3467899999999999999999999999999999999865432 133
Q ss_pred eecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCC
Q 022019 116 VTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNK 194 (304)
Q Consensus 116 ~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~ 194 (304)
..|...|.+++|.| ..++.++++|+.||.|++||+.+++....+..+.. .|.+++|+|++++++++ .||
T Consensus 696 ~~~~~~v~~~~~~~-----~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~-----~v~~~~~sp~~~~l~s~s~dg 765 (1249)
T 3sfz_A 696 DEHSEQVNCCHFTN-----KSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTN-----SVNHCRFSPDDELLASCSADG 765 (1249)
T ss_dssp ECCSSCEEEEEECS-----SSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSS-----CEEEEEECSSTTEEEEEESSS
T ss_pred cCCCCcEEEEEEec-----CCCceEEEEEeCCCeEEEEECCCcchhheecCCCC-----CEEEEEEecCCCEEEEEECCC
Confidence 45678899998854 22566899999999999999999998888876654 89999999999999965 999
Q ss_pred eEEEEEcCCCCccceeee------------------------------------------------eeecccccccccee
Q 022019 195 SVRVFDVHRPGRDFEKYS------------------------------------------------TLKGNKEGQAGIMS 226 (304)
Q Consensus 195 ~i~v~d~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~~~v~ 226 (304)
.|++||++..... ..+. .......+|...+.
T Consensus 766 ~v~vwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~ 844 (1249)
T 3sfz_A 766 TLRLWDVRSANER-KSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQ 844 (1249)
T ss_dssp EEEEEEGGGTEEE-EEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCC
T ss_pred eEEEEeCCCCccc-ceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceE
Confidence 9999999763211 0000 00001126778899
Q ss_pred EEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEecccc
Q 022019 227 AIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 227 ~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~ 298 (304)
+++|+| ++.++++++.||.|++||+.++..+..+.+|...|++++|+|+|.+|++++ .||.|++|++.++
T Consensus 845 ~~~~sp-~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s-~dg~v~vw~~~~~ 914 (1249)
T 3sfz_A 845 YCDFSP-YDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTAS-DDQTIRVWETKKV 914 (1249)
T ss_dssp EEEECS-STTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE-TTSCEEEEEHHHH
T ss_pred EEEEcC-CCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEe-CCCeEEEEEcccc
Confidence 999999 788999999999999999999999999999999999999999999999999 9999999998753
No 102
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5.1e-30 Score=207.54 Aligned_cols=209 Identities=8% Similarity=0.005 Sum_probs=153.7
Q ss_pred CCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCC--C
Q 022019 60 NNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDP--T 137 (304)
Q Consensus 60 ~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~--~ 137 (304)
...|.++.|+|+ +++++.|++|++|+........... ...........+...|.+++| +| +
T Consensus 76 ~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~-------~~~~~~~~~~~~~~~v~~~~~-------~~~~~ 138 (343)
T 3lrv_A 76 TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSK-------TNKVLREIEVDSANEIIYMYG-------HNEVN 138 (343)
T ss_dssp EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETT-------TCCEEEEEECCCSSCEEEEEC-------CC---
T ss_pred cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecC-------CcceeEEeecCCCCCEEEEEc-------CCCCC
Confidence 456788888887 8999999999999876432111111 111122233445577888887 67 8
Q ss_pred ccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeec
Q 022019 138 SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKG 216 (304)
Q Consensus 138 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~ 216 (304)
++++++++.||.|++||+++++.......+. ...+.+++|+|++.++++| .|+.|++||++........
T Consensus 139 ~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~----~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~------ 208 (343)
T 3lrv_A 139 TEYFIWADNRGTIGFQSYEDDSQYIVHSAKS----DVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSR------ 208 (343)
T ss_dssp CCEEEEEETTCCEEEEESSSSCEEEEECCCS----SCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEE------
T ss_pred CCEEEEEeCCCcEEEEECCCCcEEEEEecCC----CCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccE------
Confidence 8999999999999999999988755543322 2268999999999999976 9999999999875322111
Q ss_pred cccc-cccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEecc---ccCCeE--EEEECCCCcEEEEeecc-CCe
Q 022019 217 NKEG-QAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHG---QEGGVT--HVQFSRDGNYLYTGGRK-DPY 289 (304)
Q Consensus 217 ~~~~-~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---~~~~v~--~~~~~~~~~~l~~~~~~-d~~ 289 (304)
... |..+|++++|+| ++.+|++++ ++.|++||+++.+.+..+.. |...+. +++|+|+|++|++++ . |+.
T Consensus 209 -~~~~h~~~v~~l~fs~-~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s-~~d~~ 284 (343)
T 3lrv_A 209 -FPVDEEAKIKEVKFAD-NGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYS-NESNS 284 (343)
T ss_dssp -CCCCTTSCEEEEEECT-TSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEE-TTTTE
T ss_pred -EeccCCCCEEEEEEeC-CCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEec-CCCCc
Confidence 133 888999999999 788999999 55999999998876655543 334444 699999999999988 6 999
Q ss_pred EEEEecccce
Q 022019 290 ILCWDLRKAV 299 (304)
Q Consensus 290 i~vwd~~~~~ 299 (304)
|++|++.++.
T Consensus 285 i~v~~~~~~~ 294 (343)
T 3lrv_A 285 LTIYKFDKKT 294 (343)
T ss_dssp EEEEEECTTT
T ss_pred EEEEEEcccc
Confidence 9999996653
No 103
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=4.7e-30 Score=212.24 Aligned_cols=229 Identities=11% Similarity=0.188 Sum_probs=172.6
Q ss_pred ceeeecCCCccccc-ccceeeeecCCCCceeEEEEcCCC-CeEEEecCCCeEEEeeCCCCCCccccccccccccCCccce
Q 022019 35 PLIRFDVPPHRTYH-FYNQFRTSSIPNNFLKGIKWSPDG-SSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEA 112 (304)
Q Consensus 35 ~~~~~~~~~~~~~~-~~~~~~~~~~h~~~V~~i~~s~~~-~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 112 (304)
.+..|++....... .......+.+|...|++++|+|++ .+|++++.||.|++||+.+++...
T Consensus 105 ~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~---------------- 168 (402)
T 2aq5_A 105 TVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVL---------------- 168 (402)
T ss_dssp EEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEE----------------
T ss_pred eEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccE----------------
Confidence 35566665543211 113345788999999999999998 699999999999999998653321
Q ss_pred EEE--eecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEe-ecccccccccceEEEEECCCCcEEE
Q 022019 113 SLV--VTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTY-RAYDAVDEITAAFSVAFNPTGTKIF 189 (304)
Q Consensus 113 ~~~--~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~~~~~~v~~i~~~~~~~~l~ 189 (304)
.. ..|...|.+++| +|++.+|++++.||.|++||+++++....+ ..+.. ..+.++.|+|++.+++
T Consensus 169 -~~~~~~~~~~v~~~~~-------~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~ 236 (402)
T 2aq5_A 169 -TLGPDVHPDTIYSVDW-------SRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEG----TRPVHAVFVSEGKILT 236 (402)
T ss_dssp -EECTTTCCSCEEEEEE-------CTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCS----SSCCEEEECSTTEEEE
T ss_pred -EEecCCCCCceEEEEE-------CCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCC----CcceEEEEcCCCcEEE
Confidence 11 235678999988 778999999999999999999999888777 44432 1478999999999999
Q ss_pred EE----cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceE-eEEecc-
Q 022019 190 AG----YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMEL-LYVLHG- 263 (304)
Q Consensus 190 ~~----~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~- 263 (304)
+| .|+.|++||++......... ...+...+.+++|+|++..++++|+.||.|++||+.++++ +..+..
T Consensus 237 ~g~~~~~d~~i~iwd~~~~~~~~~~~------~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~ 310 (402)
T 2aq5_A 237 TGFSRMSERQVALWDTKHLEEPLSLQ------ELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMF 310 (402)
T ss_dssp EEECTTCCEEEEEEETTBCSSCSEEE------ECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEE
T ss_pred EeccCCCCceEEEEcCccccCCceEE------eccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeeccc
Confidence 76 79999999998753322211 1235567999999995444445666899999999998774 444443
Q ss_pred -ccCCeEEEEECCCCcEEEEeeccCCeEEEEeccccee
Q 022019 264 -QEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQ 300 (304)
Q Consensus 264 -~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~ 300 (304)
|...|.+++|+|++.++++ .++.+++|++.+++.
T Consensus 311 ~~~~~v~~~~~sp~~~~~~s---~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 311 SSKESQRGMGYMPKRGLEVN---KCEIARFYKLHERKC 345 (402)
T ss_dssp CCSSCCSEEEECCGGGSCGG---GTEEEEEEEEETTEE
T ss_pred ccCCcccceEEeccccccee---cceeEEEEEcCCCcE
Confidence 4589999999999998764 466999999988643
No 104
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.1e-29 Score=210.27 Aligned_cols=204 Identities=9% Similarity=0.022 Sum_probs=162.7
Q ss_pred ecCCCCceeEEEEcCCCCeE-EEecCCCeEEEeeCC--CCCCccccccccccccCCccceEEEeecCCeEEEEeecCccc
Q 022019 56 SSIPNNFLKGIKWSPDGSSF-LTSSEDKTLRIFSLP--ENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMS 132 (304)
Q Consensus 56 ~~~h~~~V~~i~~s~~~~~l-~s~~~dg~v~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 132 (304)
..+|.+.|++++|+|++++| ++|+.||.|++||+. ++.....+ ....+...+.+++|
T Consensus 98 ~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~---------------~~~~~~~~v~~~~~----- 157 (450)
T 2vdu_B 98 APPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLR---------------KRFCFSKRPNAISI----- 157 (450)
T ss_dssp --CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEE---------------EEEECSSCEEEEEE-----
T ss_pred CCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeee---------------ecccCCCCceEEEE-----
Confidence 45788899999999999996 899999999999997 44321111 11244577888887
Q ss_pred eeCCCccEEEEEeCCCCEEEEEcCCCeeeE----EeecccccccccceEEEEECCC---CcEEEEE-cCCeEEEEEcCCC
Q 022019 133 ASDPTSCVFASTTRDHPIHLWDATTGLLRC----TYRAYDAVDEITAAFSVAFNPT---GTKIFAG-YNKSVRVFDVHRP 204 (304)
Q Consensus 133 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~----~~~~~~~~~~~~~v~~i~~~~~---~~~l~~~-~d~~i~v~d~~~~ 204 (304)
+|++++|++++.+|.|++|++.++.... .+..+ ...|.+++|+|+ +++|+++ .|+.|++||++..
T Consensus 158 --sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h-----~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~ 230 (450)
T 2vdu_B 158 --AEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGH-----VSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQC 230 (450)
T ss_dssp --CTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEEC-----SSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCT
T ss_pred --cCCCCEEEEEeCCCcEEEEecCCcccccccceeeecc-----cCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCC
Confidence 7799999999999999999998776543 33333 348999999999 8888865 9999999999864
Q ss_pred CccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccc--------------------
Q 022019 205 GRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQ-------------------- 264 (304)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------------------- 264 (304)
.. . .. ...+|...|.+++|+ ++.+|++|+.|+.|++||+++++++..+..+
T Consensus 231 ~~-~---~~---~~~~h~~~v~~~~~s--d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (450)
T 2vdu_B 231 FI-V---DK---WLFGHKHFVSSICCG--KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNE 301 (450)
T ss_dssp TC-E---EE---ECCCCSSCEEEEEEC--STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC-------
T ss_pred ce-e---ee---eecCCCCceEEEEEC--CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhccccccccccc
Confidence 21 1 11 125788899999999 5679999999999999999999988887632
Q ss_pred -----cCCeEEEEECCCCcEEEEeeccCCeEEEEec
Q 022019 265 -----EGGVTHVQFSRDGNYLYTGGRKDPYILCWDL 295 (304)
Q Consensus 265 -----~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~ 295 (304)
...|.+++|+|++++|++++..|+.|++|++
T Consensus 302 ~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 302 NNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp ---CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred ccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 3469999999999999988767999999999
No 105
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.97 E-value=7e-29 Score=198.04 Aligned_cols=205 Identities=16% Similarity=0.181 Sum_probs=165.2
Q ss_pred ceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCc
Q 022019 51 NQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPH 130 (304)
Q Consensus 51 ~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 130 (304)
+..+.+.+|.+.|++++| |++++|++|+.||.|++||+.++.. ......+...+.+++|
T Consensus 9 ~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~-----------------~~~~~~~~~~v~~~~~--- 67 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWL-----------------GTVVYTGQGFLNSVCY--- 67 (313)
T ss_dssp EEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEE-----------------EEEEEECSSCEEEEEE---
T ss_pred HHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEE-----------------EEEeecCCccEEEEEE---
Confidence 445688999999999999 9999999999999999999864422 2244456788999988
Q ss_pred cceeCCCccEEEEEeCCCCEEEEEcCCC---eeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCc
Q 022019 131 MSASDPTSCVFASTTRDHPIHLWDATTG---LLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGR 206 (304)
Q Consensus 131 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~ 206 (304)
+|++++|++++.||.|++|++... +....+..+. ..|.++.| ++.+++++ .|+.|++||..
T Consensus 68 ----~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~-----~~i~~~~~--~~~~l~~~~~d~~i~~~d~~---- 132 (313)
T 3odt_A 68 ----DSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQ-----GNVCSLSF--QDGVVISGSWDKTAKVWKEG---- 132 (313)
T ss_dssp ----ETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCS-----SCEEEEEE--ETTEEEEEETTSEEEEEETT----
T ss_pred ----CCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcc-----cCEEEEEe--cCCEEEEEeCCCCEEEEcCC----
Confidence 678999999999999999998764 3344454444 38999999 46677754 99999999921
Q ss_pred cceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEecc-ccCCeEEEEECCCCcEEEEeec
Q 022019 207 DFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHG-QEGGVTHVQFSRDGNYLYTGGR 285 (304)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~ 285 (304)
.... ....|...+.+++|+|.++.++++++.||.|++|| ..+....+.. |...+.+++|+|++. +++++
T Consensus 133 --~~~~----~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~- 202 (313)
T 3odt_A 133 --SLVY----NLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCS- 202 (313)
T ss_dssp --EEEE----EEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEE-
T ss_pred --cEEE----ecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEcc-
Confidence 1112 22567788999999986777999999999999999 4566677776 889999999999998 88888
Q ss_pred cCCeEEEEecccceee
Q 022019 286 KDPYILCWDLRKAVQV 301 (304)
Q Consensus 286 ~d~~i~vwd~~~~~~~ 301 (304)
.||.|++||+++++.+
T Consensus 203 ~dg~i~i~d~~~~~~~ 218 (313)
T 3odt_A 203 NDGLIKLVDMHTGDVL 218 (313)
T ss_dssp TTSEEEEEETTTCCEE
T ss_pred CCCeEEEEECCchhhh
Confidence 9999999999988665
No 106
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.97 E-value=1.8e-29 Score=219.57 Aligned_cols=208 Identities=15% Similarity=0.216 Sum_probs=170.2
Q ss_pred cCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCe-EEEEeecCccceeC
Q 022019 57 SIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGES-VYDFCWFPHMSASD 135 (304)
Q Consensus 57 ~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~ 135 (304)
..|.+.|++++|+|+|++|++++ ++.|++||+.++... .........|... |.+++| +
T Consensus 15 ~~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~-------------~~~~~~~~~h~~~~v~~~~~-------s 73 (615)
T 1pgu_A 15 STQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSK-------------VPPVVQFTGHGSSVVTTVKF-------S 73 (615)
T ss_dssp CCCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCS-------------SCSEEEECTTTTSCEEEEEE-------C
T ss_pred CCccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCc-------------cccceEEecCCCceEEEEEE-------C
Confidence 46889999999999999999998 889999999854100 0112234456678 999988 7
Q ss_pred C--CccEEEEEeCCCCEEEEEcCCC--------eeeEEeecccccccccceEEEEECCCCcEEEEE-cC----CeEEEEE
Q 022019 136 P--TSCVFASTTRDHPIHLWDATTG--------LLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YN----KSVRVFD 200 (304)
Q Consensus 136 ~--~~~~l~~~~~dg~i~i~d~~~~--------~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d----~~i~v~d 200 (304)
| ++++|++++.||.|++||+.++ .....+..+.. .|.+++|+|++++++++ .+ +.|++||
T Consensus 74 p~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~-----~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d 148 (615)
T 1pgu_A 74 PIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAG-----PISDISWDFEGRRLCVVGEGRDNFGVFISWD 148 (615)
T ss_dssp SSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSS-----CEEEEEECTTSSEEEEEECCSSCSEEEEETT
T ss_pred cCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccc-----cEEEEEEeCCCCEEEEeccCCCCccEEEEEE
Confidence 8 8999999999999999999754 44445554443 89999999999999965 55 6888888
Q ss_pred cCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccC---CeEEEEECCC-
Q 022019 201 VHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEG---GVTHVQFSRD- 276 (304)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~---~v~~~~~~~~- 276 (304)
... ......+|...|.+++|+|++..++++++.|+.|++||+.+++++..+.+|.. .|++++|+|+
T Consensus 149 ~~~----------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 218 (615)
T 1pgu_A 149 SGN----------SLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDS 218 (615)
T ss_dssp TCC----------EEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTT
T ss_pred CCC----------cceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCC
Confidence 421 11223678889999999995555899999999999999999999999999999 9999999999
Q ss_pred CcEEEEeeccCCeEEEEecccceee
Q 022019 277 GNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 277 ~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
+++|++++ .||.|++||+++++.+
T Consensus 219 ~~~l~~~~-~dg~i~vwd~~~~~~~ 242 (615)
T 1pgu_A 219 GEFVITVG-SDRKISCFDGKSGEFL 242 (615)
T ss_dssp CCEEEEEE-TTCCEEEEETTTCCEE
T ss_pred CCEEEEEe-CCCeEEEEECCCCCEe
Confidence 99999999 9999999999988765
No 107
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.6e-29 Score=210.76 Aligned_cols=223 Identities=11% Similarity=0.113 Sum_probs=166.2
Q ss_pred CceeEEEEcCCCCeEEEecCCCeEEEeeCCCCC---Cccccccccc---------cc--------cCC---c--------
Q 022019 61 NFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENG---ISYDVNACSL---------AK--------DQD---S-------- 109 (304)
Q Consensus 61 ~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~---~~~~~~~~~~---------~~--------~~~---~-------- 109 (304)
.++.+++|+|+|++|+++ .++.|++||+.+++ .......... .. ... .
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 468999999999976665 57899999998877 3221111000 00 000 0
Q ss_pred ---------cceEEEeecCCeEEEEeecCccceeCCCccEE-EEEeCCCCEEEEEcC--CCeeeEEeecccccccccceE
Q 022019 110 ---------YEASLVVTEGESVYDFCWFPHMSASDPTSCVF-ASTTRDHPIHLWDAT--TGLLRCTYRAYDAVDEITAAF 177 (304)
Q Consensus 110 ---------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l-~~~~~dg~i~i~d~~--~~~~~~~~~~~~~~~~~~~v~ 177 (304)
........+...|.+++| +|++++| ++++.||.|++||+. +++....+..+. +...|.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~-------s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~---~~~~v~ 153 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRL-------TSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFC---FSKRPN 153 (450)
T ss_dssp ----------------CCCCCEEEEEE-------CTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEE---CSSCEE
T ss_pred ccccCccccCCCCCCCccCCceEEEEE-------cCCCCEEEEEECCCCeEEEEECcCCCCceeeeeeccc---CCCCce
Confidence 000000123346777777 7789886 889999999999999 787777765322 223899
Q ss_pred EEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCC---CcEEEEEecCCeEEEEecC
Q 022019 178 SVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTH---TGMLAIGSYSQTSAIYRED 253 (304)
Q Consensus 178 ~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~---~~~l~~~~~dg~i~i~d~~ 253 (304)
+++|+|++++|+++ .++.|++|++........ ......+|...|.+++|+| + +.+|++|+.|+.|++||++
T Consensus 154 ~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~----~~~~~~~h~~~v~~~~~sp-~~~~~~~l~s~~~d~~i~vwd~~ 228 (450)
T 2vdu_B 154 AISIAEDDTTVIIADKFGDVYSIDINSIPEEKF----TQEPILGHVSMLTDVHLIK-DSDGHQFIITSDRDEHIKISHYP 228 (450)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTSCCCSSC----CCCCSEECSSCEEEEEEEE-CTTSCEEEEEEETTSCEEEEEES
T ss_pred EEEEcCCCCEEEEEeCCCcEEEEecCCcccccc----cceeeecccCceEEEEEcC-CCCCCcEEEEEcCCCcEEEEECC
Confidence 99999999999966 899999999976432110 1113356788899999999 6 7899999999999999999
Q ss_pred CceEeEE-eccccCCeEEEEECCCCcEEEEeeccCCeEEEEecccceee
Q 022019 254 NMELLYV-LHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 254 ~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
+++++.. +.+|...|.+++|+ ++.+|++++ .|+.|++||+++++.+
T Consensus 229 ~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~-~d~~v~vwd~~~~~~~ 275 (450)
T 2vdu_B 229 QCFIVDKWLFGHKHFVSSICCG-KDYLLLSAG-GDDKIFAWDWKTGKNL 275 (450)
T ss_dssp CTTCEEEECCCCSSCEEEEEEC-STTEEEEEE-SSSEEEEEETTTCCEE
T ss_pred CCceeeeeecCCCCceEEEEEC-CCCEEEEEe-CCCeEEEEECCCCcEe
Confidence 9888877 56899999999999 999999999 9999999999998754
No 108
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=4.8e-29 Score=208.27 Aligned_cols=209 Identities=18% Similarity=0.294 Sum_probs=167.4
Q ss_pred eeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEE
Q 022019 36 LIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLV 115 (304)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (304)
+..|+...... ...+.+|.+.|.+++| ++++|++|+.||+|++||+.+++... ..
T Consensus 155 i~iwd~~~~~~------~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~-----------------~~ 209 (435)
T 1p22_A 155 IKIWDKNTLEC------KRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLN-----------------TL 209 (435)
T ss_dssp EEEEESSSCCE------EEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEE-----------------EE
T ss_pred EEEEeCCCCeE------EEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEE-----------------EE
Confidence 44555544433 3467899999999999 78899999999999999998654321 23
Q ss_pred eecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeee---EEeecccccccccceEEEEECCCCcEEEEE-
Q 022019 116 VTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLR---CTYRAYDAVDEITAAFSVAFNPTGTKIFAG- 191 (304)
Q Consensus 116 ~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~- 191 (304)
..|...|.++.| ++..+++|+.||.|++||+.++... ..+..+. ..|.+++| ++++++++
T Consensus 210 ~~h~~~v~~l~~---------~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~-----~~v~~~~~--~~~~l~s~~ 273 (435)
T 1p22_A 210 IHHCEAVLHLRF---------NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHR-----AAVNVVDF--DDKYIVSAS 273 (435)
T ss_dssp CCCCSCEEEEEC---------CTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCS-----SCEEEEEE--ETTEEEEEE
T ss_pred cCCCCcEEEEEE---------cCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCC-----CcEEEEEe--CCCEEEEEe
Confidence 346678888888 3458999999999999999987655 3333333 38999999 67788855
Q ss_pred cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEE
Q 022019 192 YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHV 271 (304)
Q Consensus 192 ~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~ 271 (304)
.|+.|++||+++.. ... ...+|...+.++.|++ .++++|+.||.|++||+++++++..+.+|...|.++
T Consensus 274 ~dg~i~vwd~~~~~----~~~----~~~~~~~~v~~~~~~~---~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~ 342 (435)
T 1p22_A 274 GDRTIKVWNTSTCE----FVR----TLNGHKRGIACLQYRD---RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 342 (435)
T ss_dssp TTSEEEEEETTTCC----EEE----EEECCSSCEEEEEEET---TEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred CCCeEEEEECCcCc----EEE----EEcCCCCcEEEEEeCC---CEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEE
Confidence 99999999998742 112 2256778899999854 489999999999999999999999999999999999
Q ss_pred EECCCCcEEEEeeccCCeEEEEecccce
Q 022019 272 QFSRDGNYLYTGGRKDPYILCWDLRKAV 299 (304)
Q Consensus 272 ~~~~~~~~l~~~~~~d~~i~vwd~~~~~ 299 (304)
+| ++.+|++|+ .||.|++||+++++
T Consensus 343 ~~--~~~~l~sg~-~dg~i~vwd~~~~~ 367 (435)
T 1p22_A 343 RF--DNKRIVSGA-YDGKIKVWDLVAAL 367 (435)
T ss_dssp EC--CSSEEEEEE-TTSCEEEEEHHHHT
T ss_pred Ee--cCCEEEEEe-CCCcEEEEECCCCC
Confidence 99 788999999 99999999998765
No 109
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.97 E-value=5e-29 Score=201.47 Aligned_cols=214 Identities=11% Similarity=0.071 Sum_probs=164.5
Q ss_pred eeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccce
Q 022019 54 RTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSA 133 (304)
Q Consensus 54 ~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 133 (304)
....+|.+.|++++|+|++++|++++.||.|++|++.++.. .........+...|.+++|
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~--------------~~~~~~~~~~~~~v~~~~~------ 64 (342)
T 1yfq_A 5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAK--------------NVDLLQSLRYKHPLLCCNF------ 64 (342)
T ss_dssp ECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTT--------------EEEEEEEEECSSCEEEEEE------
T ss_pred ecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCc--------------cccceeeeecCCceEEEEE------
Confidence 34568999999999999999999999999999999875431 0112234467789999988
Q ss_pred eCCCcc-EEEEEeCCCCEEEEEc-CCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccc-e
Q 022019 134 SDPTSC-VFASTTRDHPIHLWDA-TTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDF-E 209 (304)
Q Consensus 134 ~~~~~~-~l~~~~~dg~i~i~d~-~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~-~ 209 (304)
+|+++ +|++++.||.|++||+ .+++. ..+... .+...|.+++|+| +..++++ .|+.|++||++...... .
T Consensus 65 -~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~---~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~ 138 (342)
T 1yfq_A 65 -IDNTDLQIYVGTVQGEILKVDLIGSPSF-QALTNN---EANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIA 138 (342)
T ss_dssp -EESSSEEEEEEETTSCEEEECSSSSSSE-EECBSC---CCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEE
T ss_pred -CCCCCcEEEEEcCCCeEEEEEeccCCce-Eecccc---CCCCceEEEEeCC-CCEEEEEcCCCeEEEEccccccccccc
Confidence 66899 9999999999999999 87755 344430 1333899999999 8888855 99999999987411000 0
Q ss_pred eeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCC-ce--EeEEeccccCCeEEEEECC-CCcEEEEeec
Q 022019 210 KYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN-ME--LLYVLHGQEGGVTHVQFSR-DGNYLYTGGR 285 (304)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~-~~--~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~ 285 (304)
........ ..+...+.+++|+| ++ +++++.|+.|++||++. +. .......|...+.+++|+| ++.+|++++
T Consensus 139 ~~~~~~~~-~~~~~~v~~~~~~~-~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~- 213 (342)
T 1yfq_A 139 VKNLNSNN-TKVKNKIFTMDTNS-SR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSS- 213 (342)
T ss_dssp EEESCSSS-SSSCCCEEEEEECS-SE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEE-
T ss_pred ccCCeeeE-EeeCCceEEEEecC-Cc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEe-
Confidence 00011111 22677899999999 44 89999999999999987 44 3334456888999999999 999999999
Q ss_pred cCCeEEEEecccc
Q 022019 286 KDPYILCWDLRKA 298 (304)
Q Consensus 286 ~d~~i~vwd~~~~ 298 (304)
.||.|++|+++..
T Consensus 214 ~dg~i~i~~~~~~ 226 (342)
T 1yfq_A 214 IDGRVAVEFFDDQ 226 (342)
T ss_dssp TTSEEEEEECCTT
T ss_pred cCCcEEEEEEcCC
Confidence 9999999999776
No 110
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.6e-29 Score=208.17 Aligned_cols=200 Identities=12% Similarity=0.112 Sum_probs=155.8
Q ss_pred CCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecC-----CeEEEEeecCccc
Q 022019 58 IPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEG-----ESVYDFCWFPHMS 132 (304)
Q Consensus 58 ~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~ 132 (304)
+|...|.+++|||+|.+||+++.||.|++||... .. ....|. ..+.+++|
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l------------------~~l~~~~~~~~~sv~svaf----- 137 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--ML------------------TNLDSKGNLSSRTYHCFEW----- 137 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EE------------------EECCCSSCSTTTCEEEEEE-----
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--ee------------------eeccCCCccccccEEEEEE-----
Confidence 5688999999999999999999999999999542 00 111122 24888877
Q ss_pred eeCCCccEEEEEeCCCCEEEEEcCCCee-------eEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCC
Q 022019 133 ASDPTSCVFASTTRDHPIHLWDATTGLL-------RCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPG 205 (304)
Q Consensus 133 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~-------~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~ 205 (304)
||+|++|++|+.||+|++||+.++.. ..++..+.. +|...|.+++|+|+| +++++.|++|++||+....
T Consensus 138 --SPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~-gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~ 213 (588)
T 2j04_A 138 --NPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDA-GSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASS 213 (588)
T ss_dssp --CSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCT-TCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSS
T ss_pred --cCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccc-cccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCc
Confidence 88999999999999999999998753 455543332 355699999999999 5556799999999997642
Q ss_pred ccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEE--CCCCcEEEEe
Q 022019 206 RDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQF--SRDGNYLYTG 283 (304)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~ 283 (304)
.. .....+. .+|...|.+++|+ + ..|++++ ++.|++||+.+++......+|...|.+++| +|++..|+++
T Consensus 214 ~~-~~~~tL~---~~h~~~V~svaFs--g-~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a 285 (588)
T 2j04_A 214 HQ-PVSRMIQ---NASRRKITDLKIV--D-YKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMS 285 (588)
T ss_dssp SC-CCEEEEE---CCCSSCCCCEEEE--T-TEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEEC
T ss_pred cc-cceeeec---ccccCcEEEEEEE--C-CEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEE
Confidence 10 0011111 3567789999999 3 5888887 699999999988874444489999999999 9999999999
Q ss_pred eccCCeEEEEecc
Q 022019 284 GRKDPYILCWDLR 296 (304)
Q Consensus 284 ~~~d~~i~vwd~~ 296 (304)
+ .||+ ++|...
T Consensus 286 ~-edG~-klw~~d 296 (588)
T 2j04_A 286 N-KTSY-KVLLED 296 (588)
T ss_dssp S-SCEE-EEEESS
T ss_pred c-CCCC-EEEeec
Confidence 9 9999 999975
No 111
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=1.3e-28 Score=205.74 Aligned_cols=213 Identities=16% Similarity=0.274 Sum_probs=166.4
Q ss_pred eeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEE
Q 022019 36 LIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLV 115 (304)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (304)
+..|+..... ....+.+|.+.|.+++|+ +.+|++|+.||.|++||+.++... ......
T Consensus 195 i~vwd~~~~~------~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~--------------~~~~~~ 252 (435)
T 1p22_A 195 VRVWDVNTGE------MLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDI--------------TLRRVL 252 (435)
T ss_dssp EEEEESSSCC------EEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCC--------------EEEEEE
T ss_pred EEEEECCCCc------EEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCc--------------eeeeEe
Confidence 3445554443 234677899999999997 459999999999999999865321 111244
Q ss_pred eecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCC
Q 022019 116 VTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNK 194 (304)
Q Consensus 116 ~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~ 194 (304)
..|...|.++.| +++++++|+.||.|++||+++++....+..+.. .|.++.|+ +.++++| .|+
T Consensus 253 ~~~~~~v~~~~~---------~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~-----~v~~~~~~--~~~l~~g~~dg 316 (435)
T 1p22_A 253 VGHRAAVNVVDF---------DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKR-----GIACLQYR--DRLVVSGSSDN 316 (435)
T ss_dssp CCCSSCEEEEEE---------ETTEEEEEETTSEEEEEETTTCCEEEEEECCSS-----CEEEEEEE--TTEEEEEETTS
T ss_pred cCCCCcEEEEEe---------CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCC-----cEEEEEeC--CCEEEEEeCCC
Confidence 556778888877 677999999999999999999998888876654 88999984 5677755 999
Q ss_pred eEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCce---------EeEEecccc
Q 022019 195 SVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME---------LLYVLHGQE 265 (304)
Q Consensus 195 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~---------~~~~~~~~~ 265 (304)
.|++||++++. ... ...+|...|.+++|+ +.+|++|+.||.|++||++++. ++..+.+|.
T Consensus 317 ~i~iwd~~~~~----~~~----~~~~h~~~v~~~~~~---~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~ 385 (435)
T 1p22_A 317 TIRLWDIECGA----CLR----VLEGHEELVRCIRFD---NKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHS 385 (435)
T ss_dssp CEEEEETTTCC----EEE----EECCCSSCEEEEECC---SSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCS
T ss_pred eEEEEECCCCC----EEE----EEeCCcCcEEEEEec---CCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCC
Confidence 99999998731 112 225688889999993 4589999999999999998766 788899999
Q ss_pred CCeEEEEECCCCcEEEEeeccCCeEEEEeccccee
Q 022019 266 GGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQ 300 (304)
Q Consensus 266 ~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~ 300 (304)
+.|++++| ++.+|++++ .||.|++||+.+...
T Consensus 386 ~~v~~l~~--~~~~l~s~s-~Dg~i~iwd~~~~~~ 417 (435)
T 1p22_A 386 GRVFRLQF--DEFQIVSSS-HDDTILIWDFLNDPA 417 (435)
T ss_dssp SCCCCEEE--CSSCEEECC-SSSEEEEEC------
T ss_pred CCeEEEEe--CCCEEEEEe-CCCEEEEEECCCCCC
Confidence 99999999 788899999 999999999987654
No 112
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=6.8e-28 Score=201.90 Aligned_cols=212 Identities=17% Similarity=0.264 Sum_probs=171.8
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEE
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (304)
.+..|+...... ...+.+|.+.|++++|+ +++|++|+.||+|++||+.+++... .
T Consensus 140 ~i~vwd~~~~~~------~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~-----------------~ 194 (445)
T 2ovr_B 140 TLKVWSAVTGKC------LRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIH-----------------T 194 (445)
T ss_dssp CEEEEETTTCCE------EEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEE-----------------E
T ss_pred cEEEEECCCCcE------EEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEE-----------------E
Confidence 345566655433 34678999999999997 6699999999999999998653321 2
Q ss_pred EeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cC
Q 022019 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YN 193 (304)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d 193 (304)
...|...|.++.| ++..+++|+.||.|++||+.+++....+..+.. .|.++.| ++.+++++ .|
T Consensus 195 ~~~h~~~v~~~~~---------~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~-----~v~~~~~--~~~~l~~~~~d 258 (445)
T 2ovr_B 195 LYGHTSTVRCMHL---------HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVA-----AVRCVQY--DGRRVVSGAYD 258 (445)
T ss_dssp ECCCSSCEEEEEE---------ETTEEEEEETTSEEEEEESSSCCEEEEEECCSS-----CEEEEEE--CSSCEEEEETT
T ss_pred ECCCCCcEEEEEe---------cCCEEEEEeCCCEEEEEECCCCcEEEEEcCCcc-----cEEEEEE--CCCEEEEEcCC
Confidence 3346678888887 355899999999999999999998888876654 8999999 57777755 99
Q ss_pred CeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEE
Q 022019 194 KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQF 273 (304)
Q Consensus 194 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~ 273 (304)
+.|++||++.. .. .....+|...+.+++| ++.++++|+.||.|++||+++++++..+.+|...+.++.+
T Consensus 259 g~i~iwd~~~~----~~----~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~ 327 (445)
T 2ovr_B 259 FMVKVWDPETE----TC----LHTLQGHTNRVYSLQF---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL 327 (445)
T ss_dssp SCEEEEEGGGT----EE----EEEECCCSSCEEEEEE---CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEE
T ss_pred CEEEEEECCCC----cE----eEEecCCCCceEEEEE---CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEE
Confidence 99999999763 11 1222567888999999 3458999999999999999999999999999999998888
Q ss_pred CCCCcEEEEeeccCCeEEEEecccceee
Q 022019 274 SRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 274 ~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
+ +.+|++++ .||.|++||+++++.+
T Consensus 328 ~--~~~l~~~~-~dg~i~vwd~~~~~~~ 352 (445)
T 2ovr_B 328 K--DNILVSGN-ADSTVKIWDIKTGQCL 352 (445)
T ss_dssp E--TTEEEEEE-TTSCEEEEETTTCCEE
T ss_pred e--CCEEEEEe-CCCeEEEEECCCCcEE
Confidence 4 67999999 9999999999988654
No 113
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.96 E-value=3.8e-27 Score=197.36 Aligned_cols=211 Identities=20% Similarity=0.331 Sum_probs=170.0
Q ss_pred eeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEE
Q 022019 36 LIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLV 115 (304)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (304)
+..|+..... ....+.+|...|.+++|+ +.+|++|+.||.|++||+.+++.. ...
T Consensus 181 i~vwd~~~~~------~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~-----------------~~~ 235 (445)
T 2ovr_B 181 LKVWNAETGE------CIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCL-----------------HVL 235 (445)
T ss_dssp EEEEETTTTE------EEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEE-----------------EEE
T ss_pred EEEEECCcCc------EEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEE-----------------EEE
Confidence 3445554443 234678999999999995 578999999999999999865332 133
Q ss_pred eecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCC
Q 022019 116 VTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNK 194 (304)
Q Consensus 116 ~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~ 194 (304)
..|...+.++.| ++.++++++.||.|++||+++++....+..+.. .|.++.| ++.+++++ .|+
T Consensus 236 ~~~~~~v~~~~~---------~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-----~v~~~~~--~~~~l~~~~~d~ 299 (445)
T 2ovr_B 236 MGHVAAVRCVQY---------DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTN-----RVYSLQF--DGIHVVSGSLDT 299 (445)
T ss_dssp ECCSSCEEEEEE---------CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSS-----CEEEEEE--CSSEEEEEETTS
T ss_pred cCCcccEEEEEE---------CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCC-----ceEEEEE--CCCEEEEEeCCC
Confidence 356678888877 677899999999999999999998888876554 8999999 67888855 999
Q ss_pred eEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEecc---ccCCeEEE
Q 022019 195 SVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHG---QEGGVTHV 271 (304)
Q Consensus 195 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---~~~~v~~~ 271 (304)
.|++||+++.. ... ...+|...+.++.+++ .++++|+.||.|++||+++++++..+.+ |...|+++
T Consensus 300 ~i~i~d~~~~~----~~~----~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~ 368 (445)
T 2ovr_B 300 SIRVWDVETGN----CIH----TLTGHQSLTSGMELKD---NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCL 368 (445)
T ss_dssp CEEEEETTTCC----EEE----EECCCCSCEEEEEEET---TEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEE
T ss_pred eEEEEECCCCC----EEE----EEcCCcccEEEEEEeC---CEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEE
Confidence 99999998742 112 2256777788888764 4899999999999999999999999886 88899999
Q ss_pred EECCCCcEEEEeeccCCeEEEEecccceee
Q 022019 272 QFSRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 272 ~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
+|+ +.+|++++ .||.|++||+++++.+
T Consensus 369 ~~~--~~~l~s~~-~dg~v~iwd~~~~~~~ 395 (445)
T 2ovr_B 369 QFN--KNFVITSS-DDGTVKLWDLKTGEFI 395 (445)
T ss_dssp EEC--SSEEEEEE-TTSEEEEEETTTCCEE
T ss_pred EEC--CCEEEEEe-CCCeEEEEECCCCcee
Confidence 996 68999999 9999999999998754
No 114
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.4e-28 Score=219.98 Aligned_cols=222 Identities=14% Similarity=0.130 Sum_probs=161.3
Q ss_pred eecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
.+.+|...+.+++|+|++++|+||+.||+|++||+.++..... ..... . ....+...|...|.+++|
T Consensus 430 ~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~-~~~~~--~---l~~~~~~~h~~~V~svaf------- 496 (902)
T 2oaj_A 430 LLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDN-ASFEV--N---LSRTLNKAKELAVDKISF------- 496 (902)
T ss_dssp SCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTT-BCEEE--E---HHHHTTCSSSCCEEEEEE-------
T ss_pred cccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCC-ceEEe--e---chhhcCCCCCCceeEEEe-------
Confidence 3567777888888899999999999999999999987643110 00000 0 000000146678999887
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCCe---------------------------------------------eeEEeecccc
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTGL---------------------------------------------LRCTYRAYDA 169 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~~---------------------------------------------~~~~~~~~~~ 169 (304)
+|++++||+|+.||+|+|||+.+++ +...+..
T Consensus 497 spdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~--- 573 (902)
T 2oaj_A 497 AAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHA--- 573 (902)
T ss_dssp ETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECC---
T ss_pred cCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEc---
Confidence 7899999999999999999998663 1233333
Q ss_pred cccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeecccc-ccccceeEEEee-----cCC--CcEEEE
Q 022019 170 VDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKE-GQAGIMSAIAFS-----PTH--TGMLAI 240 (304)
Q Consensus 170 ~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~-----p~~--~~~l~~ 240 (304)
|...|++++|+|+| +||+| .|++|++||++.... ... ..+ .... +|...|++++|+ ||+ +.+|++
T Consensus 574 --h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~-~~~-~~~-~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~s 647 (902)
T 2oaj_A 574 --NKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAI-IYM-ENI-REISGAQSACVTCIEFVIMEYGDDGYSSILMVC 647 (902)
T ss_dssp --CSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEE-EEE-EEG-GGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEE
T ss_pred --CCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeE-EEE-eeh-hHhccccccceEEEEEEEEecCCCCCcceEEEE
Confidence 34499999999999 88866 999999999875311 100 111 2333 889999999999 843 589999
Q ss_pred EecCCeEEEEec---CCceEeEEecccc-----CCeEEEE-EC----------------------CCCcEEEEeeccCCe
Q 022019 241 GSYSQTSAIYRE---DNMELLYVLHGQE-----GGVTHVQ-FS----------------------RDGNYLYTGGRKDPY 289 (304)
Q Consensus 241 ~~~dg~i~i~d~---~~~~~~~~~~~~~-----~~v~~~~-~~----------------------~~~~~l~~~~~~d~~ 289 (304)
|+.|++|++||+ .+++....+.+|. ++|.+++ |+ ++|..|+ ++ +..
T Consensus 648 gs~D~tv~~wd~~p~~~g~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~-~~--~~~ 724 (902)
T 2oaj_A 648 GTDMGEVITYKILPASGGKFDVQLMDITNVTSKGPIHKIDAFSKETKSSCLATIPKMQNLSKGLCIPGIVLI-TG--FDD 724 (902)
T ss_dssp EETTSEEEEEEEEECGGGCEEEEEEEEEECCSSCCCCEEEEEETTTCCBCBCBHHHHHGGGGTCCCCEEEEE-EC--SSE
T ss_pred EecCCcEEEEEEecCCCCcEEEEecCceecCCCCceEEEEeEecCCCCcccCCHHHHhccCCCCCCCeEEEE-Ee--ccc
Confidence 999999999999 7888888887764 6777776 65 4554444 43 678
Q ss_pred EEEEecccceee
Q 022019 290 ILCWDLRKAVQV 301 (304)
Q Consensus 290 i~vwd~~~~~~~ 301 (304)
|+||++.+++++
T Consensus 725 ir~~~~~~~k~~ 736 (902)
T 2oaj_A 725 IRLITLGKSKST 736 (902)
T ss_dssp EEEECTTCCCEE
T ss_pred eEEEeCccccce
Confidence 999999987654
No 115
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=5.6e-28 Score=195.59 Aligned_cols=202 Identities=11% Similarity=0.018 Sum_probs=149.2
Q ss_pred cCCCCceeEEEEcC--CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 57 SIPNNFLKGIKWSP--DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 57 ~~h~~~V~~i~~s~--~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
.+|.+.|.+++|+| ++++|++++.||+|++||+.++..... ....+...+.+++|
T Consensus 122 ~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~----------------~~~~~~~~i~~~~~------- 178 (343)
T 3lrv_A 122 VDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIV----------------HSAKSDVEYSSGVL------- 178 (343)
T ss_dssp CCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEE----------------ECCCSSCCCCEEEE-------
T ss_pred cCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEE----------------EecCCCCceEEEEE-------
Confidence 47889999999999 999999999999999999986543110 11223345777766
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCCeee-EEeec-ccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccceeee
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTGLLR-CTYRA-YDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYS 212 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~-~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~ 212 (304)
+|++.+|++|+.||.|++||+++++.. ..+.. |. ..|.+++|+|++.+|+++.++.|++||++.... ...+.
T Consensus 179 ~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~-----~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~~-~~~~~ 252 (343)
T 3lrv_A 179 HKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEE-----AKIKEVKFADNGYWMVVECDQTVVCFDLRKDVG-TLAYP 252 (343)
T ss_dssp CTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTT-----SCEEEEEECTTSSEEEEEESSBEEEEETTSSTT-CBSSC
T ss_pred CCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCC-----CCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCCc-ceeec
Confidence 789999999999999999999998876 56655 43 399999999999999977577999999987432 11111
Q ss_pred eeeccccccccce--eEEEeecCCCcEEEEEec-CCeEEEEecCCceEeEEeccccCCeEEEEECC---CCcEEEEeecc
Q 022019 213 TLKGNKEGQAGIM--SAIAFSPTHTGMLAIGSY-SQTSAIYREDNMELLYVLHGQEGGVTHVQFSR---DGNYLYTGGRK 286 (304)
Q Consensus 213 ~~~~~~~~~~~~v--~~~~~~p~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~~ 286 (304)
.+ ..+...+ .+++|+| ++.+|++++. |+.|++|++......... .++..+.|+| ++..|++++ .
T Consensus 253 ~~----~~~~~~~~~~~~~~~~-~g~~l~~~s~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~-~ 322 (343)
T 3lrv_A 253 TY----TIPEFKTGTVTYDIDD-SGKNMIAYSNESNSLTIYKFDKKTKNWTK----DEESALCLQSDTADFTDMDVVC-G 322 (343)
T ss_dssp CC----BC-----CCEEEEECT-TSSEEEEEETTTTEEEEEEECTTTCSEEE----EEEEECCC----CCCCEEEEEE-E
T ss_pred cc----ccccccccceEEEECC-CCCEEEEecCCCCcEEEEEEcccccceEe----cCceeEecCccccccceeEEEe-c
Confidence 11 1122233 3699999 7789999888 999999998665433222 4677888988 888999999 8
Q ss_pred CCeEEEEeccc
Q 022019 287 DPYILCWDLRK 297 (304)
Q Consensus 287 d~~i~vwd~~~ 297 (304)
||.+.++-...
T Consensus 323 d~~~~~~~~~~ 333 (343)
T 3lrv_A 323 DGGIAAILKTN 333 (343)
T ss_dssp TTEEEEEEECS
T ss_pred CCceEEEEecC
Confidence 99998875443
No 116
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=5.2e-29 Score=205.18 Aligned_cols=225 Identities=13% Similarity=0.023 Sum_probs=140.8
Q ss_pred CCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee-CCC
Q 022019 59 PNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS-DPT 137 (304)
Q Consensus 59 h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~ 137 (304)
|...+....+++++.+|++++.|++|+|||+.++...... ......+|...|.+++|.|..... ..+
T Consensus 88 ~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~------------~~~~~~gH~~~v~~v~~~p~~~~~~~~d 155 (393)
T 4gq1_A 88 HDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQH------------VLGGKSGHHNFVNDIDIADVYSADNRLA 155 (393)
T ss_dssp ---------CCEEEEEEEEEETTSCEEEEEEETTEEEEEE------------EECTTTSCSSCEEEEEEEEEECTTCSEE
T ss_pred cCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceee------------eecccCCCCCceEEEEEccccccccCCC
Confidence 3344444444556778999999999999998765331110 000123577899999997743322 237
Q ss_pred ccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCc-EEEEE-cCCeEEEEEcCCCCccceeeee--
Q 022019 138 SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGT-KIFAG-YNKSVRVFDVHRPGRDFEKYST-- 213 (304)
Q Consensus 138 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~~~-~d~~i~v~d~~~~~~~~~~~~~-- 213 (304)
+++|++|+.|++|+|||++++.....+..+.. .|.+++|+|++. +|+++ .|+.|++||++++.........
T Consensus 156 ~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~-----~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~ 230 (393)
T 4gq1_A 156 EQVIASVGDDCTLIIWRLTDEGPILAGYPLSS-----PGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTEL 230 (393)
T ss_dssp EEEEEEEETTSEEEEEEEETTEEEEEEEECSS-----CEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------
T ss_pred CCEEEEEECCCeEEEEECCCCceeeeecCCCC-----CcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCC
Confidence 89999999999999999988877666655544 899999999875 56655 9999999999875322111100
Q ss_pred ---------------eeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECC---
Q 022019 214 ---------------LKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSR--- 275 (304)
Q Consensus 214 ---------------~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--- 275 (304)
......+|...+.++.|++.++..+++++.|+.+++||+..+.....+..|...+..+.+.|
T Consensus 231 ~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~ 310 (393)
T 4gq1_A 231 VKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQ 310 (393)
T ss_dssp CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEE
T ss_pred cccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccc
Confidence 00112456778899999844788999999999999999988877666666655544444333
Q ss_pred -----------------CCcEEEEeeccCCeEEEEecccceee
Q 022019 276 -----------------DGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 276 -----------------~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
++.++++|+ .||.|++||+.+++.+
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~sgs-~Dg~V~lwd~~~~~~~ 352 (393)
T 4gq1_A 311 GISLFPSLLGACPHPRYMDYFATAHS-QHGLIQLINTYEKDSN 352 (393)
T ss_dssp EECSSCCSSCCEECSSCTTEEEEEET-TTTEEEEEETTCTTCC
T ss_pred cccccCcceeEEEccCCCCEEEEEEC-CCCEEEEEECCCCcEE
Confidence 334566777 8999999999988654
No 117
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.96 E-value=1.1e-26 Score=193.16 Aligned_cols=211 Identities=17% Similarity=0.283 Sum_probs=162.3
Q ss_pred ceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEE
Q 022019 62 FLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVF 141 (304)
Q Consensus 62 ~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l 141 (304)
.++.|+||++ +.||+|. |++|+|||..+++..... ....|...|++++| +|+|++|
T Consensus 107 y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~---------------~~~~~~~~V~sv~f-------spdg~~l 162 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLL---------------QMEQPGEYISSVAW-------IKEGNYL 162 (420)
T ss_dssp TCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEE---------------ECCSTTCCEEEEEE-------CTTSSEE
T ss_pred cceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEE---------------EecCCCCcEEEEEE-------CCCCCEE
Confidence 4678999975 4777665 899999999876442111 11235567999988 7799999
Q ss_pred EEEeCCCCEEEEEcCCCeeeEEeecccc------------------------------------cccccceEEEEECCCC
Q 022019 142 ASTTRDHPIHLWDATTGLLRCTYRAYDA------------------------------------VDEITAAFSVAFNPTG 185 (304)
Q Consensus 142 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~------------------------------------~~~~~~v~~i~~~~~~ 185 (304)
++|+.||.|++||+.+++.+..+..|.. ..+...+..+.|+|++
T Consensus 163 asgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g 242 (420)
T 4gga_A 163 AVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDG 242 (420)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTS
T ss_pred EEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCC
Confidence 9999999999999998887766554321 1234467888999999
Q ss_pred cEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEE--ecCCeEEEEecCCceEeEEec
Q 022019 186 TKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIG--SYSQTSAIYREDNMELLYVLH 262 (304)
Q Consensus 186 ~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~--~~dg~i~i~d~~~~~~~~~~~ 262 (304)
++++++ .|+.+++||............ ....|...|.+++|+|.+..+++++ +.|+.|++||+.+++++..+.
T Consensus 243 ~~l~s~~~D~~v~i~~~~~~~~~~~~~~----~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~ 318 (420)
T 4gga_A 243 RHLASGGNDNLVNVWPSAPGEGGWVPLQ----TFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD 318 (420)
T ss_dssp SEEEEEETTSCEEEEESSCCSSCSCCSE----EECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEE
T ss_pred CeeeeeeccccceEEeeccccccceeee----eecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeec
Confidence 998865 899999999876533222222 2256778899999999878888765 479999999999999998888
Q ss_pred cccCCeEEEEECCCCcEEEEee-ccCCeEEEEecccceee
Q 022019 263 GQEGGVTHVQFSRDGNYLYTGG-RKDPYILCWDLRKAVQV 301 (304)
Q Consensus 263 ~~~~~v~~~~~~~~~~~l~~~~-~~d~~i~vwd~~~~~~~ 301 (304)
.| ..+.++.|+|++..+++++ ..|+.|+|||+.+++++
T Consensus 319 ~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v 357 (420)
T 4gga_A 319 AH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKV 357 (420)
T ss_dssp CS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEE
T ss_pred cc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEE
Confidence 54 5789999999999888764 26899999999998765
No 118
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.96 E-value=2.7e-26 Score=183.48 Aligned_cols=210 Identities=17% Similarity=0.266 Sum_probs=159.8
Q ss_pred eeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEE
Q 022019 63 LKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFA 142 (304)
Q Consensus 63 V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~ 142 (304)
+++|+||+++ +||+| .|++|+|||+.+++..... ....|...|.+++| +|++++|+
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~---------------~~~~~~~~V~~v~~-------~~~~~~l~ 83 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLL---------------QMEQPGEYISSVAW-------IKEGNYLA 83 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEE---------------ECCSTTCCEEEEEE-------CTTSSEEE
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEE---------------EecCCCCeEEEEEE-------CCCCCEEE
Confidence 5789999876 67765 5999999999876542211 11235567999988 77999999
Q ss_pred EEeCCCCEEEEEcCCCeeeEEeecccc------------------------------------cccccceEEEEECCCCc
Q 022019 143 STTRDHPIHLWDATTGLLRCTYRAYDA------------------------------------VDEITAAFSVAFNPTGT 186 (304)
Q Consensus 143 ~~~~dg~i~i~d~~~~~~~~~~~~~~~------------------------------------~~~~~~v~~i~~~~~~~ 186 (304)
+|+.||+|++||+++++....+..+.. ..+...+..+.++++++
T Consensus 84 sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (318)
T 4ggc_A 84 VGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGR 163 (318)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSS
T ss_pred EEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCC
Confidence 999999999999999887766554321 12345678899999999
Q ss_pred EEEEE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEE--EEecCCeEEEEecCCceEeEEecc
Q 022019 187 KIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLA--IGSYSQTSAIYREDNMELLYVLHG 263 (304)
Q Consensus 187 ~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~--~~~~dg~i~i~d~~~~~~~~~~~~ 263 (304)
+++++ .|+.|++||+++......... ....+...+.++.++|.+..++. +++.++.|++||.+.........
T Consensus 164 ~l~s~~~d~~i~iwd~~~~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~- 238 (318)
T 4ggc_A 164 HLASGGNDNLVNVWPSAPGEGGWVPLQ----TFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD- 238 (318)
T ss_dssp EEEEEETTSCEEEEESSCBTTBSCCSE----EECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE-
T ss_pred EEEEEecCcceeEEECCCCccccccee----eecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc-
Confidence 99965 999999999987533222111 12456677999999997666654 45678999999998887766654
Q ss_pred ccCCeEEEEECCCCcEEEEee-ccCCeEEEEecccceee
Q 022019 264 QEGGVTHVQFSRDGNYLYTGG-RKDPYILCWDLRKAVQV 301 (304)
Q Consensus 264 ~~~~v~~~~~~~~~~~l~~~~-~~d~~i~vwd~~~~~~~ 301 (304)
+...+..+.|+|++..+++++ ..|+.|++||+++++.+
T Consensus 239 ~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~ 277 (318)
T 4ggc_A 239 AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKV 277 (318)
T ss_dssp CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEE
T ss_pred ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEE
Confidence 677899999999999887653 26899999999998765
No 119
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=8.4e-26 Score=185.97 Aligned_cols=219 Identities=16% Similarity=0.195 Sum_probs=165.2
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeE-EEecCCCeEEEeeCCCCCCccccccccccccCCccceE
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSF-LTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEAS 113 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l-~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (304)
.+..|+....+... .+.+|. .+.+++|+|+|+++ ++++.|+.|++||+.+++..
T Consensus 13 ~v~v~d~~~~~~~~------~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~------------------ 67 (391)
T 1l0q_A 13 NISVIDVTSNKVTA------TIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVI------------------ 67 (391)
T ss_dssp EEEEEETTTTEEEE------EEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEE------------------
T ss_pred EEEEEECCCCeEEE------EeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEE------------------
Confidence 35567766554333 455554 48999999999976 67778999999999765432
Q ss_pred EEeecCCeEEEEeecCccceeCCCccEEEE-EeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE
Q 022019 114 LVVTEGESVYDFCWFPHMSASDPTSCVFAS-TTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG 191 (304)
Q Consensus 114 ~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~ 191 (304)
........+.+++| +|+++.+++ ++.++.|++||+.+++....+..+. .+.+++|+|+++.++ ++
T Consensus 68 ~~~~~~~~v~~~~~-------spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~------~~~~~~~s~dg~~l~~~~ 134 (391)
T 1l0q_A 68 ATVPAGSSPQGVAV-------SPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGK------SPLGLALSPDGKKLYVTN 134 (391)
T ss_dssp EEEECSSSEEEEEE-------CTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS------SEEEEEECTTSSEEEEEE
T ss_pred EEEECCCCccceEE-------CCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCC------CcceEEECCCCCEEEEEe
Confidence 22233346777777 778887754 4567999999999998877766543 678999999999885 55
Q ss_pred -cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEE
Q 022019 192 -YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTH 270 (304)
Q Consensus 192 -~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~ 270 (304)
.++.|++||+++.. ....+ ..+ ..+.+++|+|++..++++++.++.|++||+++++.+..+. +...+.+
T Consensus 135 ~~~~~v~~~d~~~~~----~~~~~----~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~ 204 (391)
T 1l0q_A 135 NGDKTVSVINTVTKA----VINTV----SVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSG 204 (391)
T ss_dssp TTTTEEEEEETTTTE----EEEEE----ECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEE
T ss_pred CCCCEEEEEECCCCc----EEEEE----ecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccc
Confidence 79999999997631 11221 122 3468999999555555788889999999999998887776 4567899
Q ss_pred EEECCCCcEEEEeec--cCCeEEEEecccceee
Q 022019 271 VQFSRDGNYLYTGGR--KDPYILCWDLRKAVQV 301 (304)
Q Consensus 271 ~~~~~~~~~l~~~~~--~d~~i~vwd~~~~~~~ 301 (304)
++|+|+|++|++++. .++.|++||+++++.+
T Consensus 205 ~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~ 237 (391)
T 1l0q_A 205 IAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKIT 237 (391)
T ss_dssp EEECTTSSEEEEEEECSSCCEEEEEETTTTEEE
T ss_pred eEECCCCCEEEEEecCcCCCcEEEEECCCCeEE
Confidence 999999999998873 4899999999988654
No 120
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.96 E-value=9.3e-27 Score=190.96 Aligned_cols=193 Identities=19% Similarity=0.262 Sum_probs=146.7
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcC-CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceE
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSP-DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEAS 113 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~-~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (304)
.+..|++........+.. ....+|...|.+++|++ ++.+|++|+.||+|++||+..... ...
T Consensus 181 ~i~~wd~~~~~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~----------------~~~ 243 (380)
T 3iz6_a 181 TCVLWDVTTGQRISIFGS-EFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSR----------------AVR 243 (380)
T ss_dssp CEEEECTTTCCEEEEECC-CSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCC----------------CCE
T ss_pred cEEEEEcCCCcEEEEeec-ccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCc----------------ceE
Confidence 355677666554432110 12268999999999987 889999999999999999873211 112
Q ss_pred EEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeeccccc--ccccceEEEEECCCCcEEEEE
Q 022019 114 LVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAV--DEITAAFSVAFNPTGTKIFAG 191 (304)
Q Consensus 114 ~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~--~~~~~v~~i~~~~~~~~l~~~ 191 (304)
....|...|.+++| +|++.+|++|+.||+|++||+++++....+..+... .+...|.+++|+|+|+++++|
T Consensus 244 ~~~~h~~~v~~v~~-------~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g 316 (380)
T 3iz6_a 244 TYHGHEGDINSVKF-------FPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAG 316 (380)
T ss_dssp EECCCSSCCCEEEE-------CTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEE
T ss_pred EECCcCCCeEEEEE-------ecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEE
Confidence 34456778888887 779999999999999999999999888777654321 122358899999999999977
Q ss_pred -cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCce
Q 022019 192 -YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME 256 (304)
Q Consensus 192 -~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~ 256 (304)
.||.|++||+.... ....+.....+|...|.+++|+| ++.+|++|+.||.|++|++...+
T Consensus 317 ~~dg~i~vwd~~~~~----~~~~~~~~~~~h~~~v~~l~~s~-dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 317 YSNGDCYVWDTLLAE----MVLNLGTLQNSHEGRISCLGLSS-DGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp CTTSCEEEEETTTCC----EEEEECCSCSSCCCCCCEEEECS-SSSEEEEECTTSCEEEEECCSSS
T ss_pred ECCCCEEEEECCCCc----eEEEEecccCCCCCceEEEEECC-CCCEEEEeeCCCCEEEEecCCCc
Confidence 99999999997642 22223233367889999999999 78899999999999999987653
No 121
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.95 E-value=1.9e-25 Score=183.83 Aligned_cols=217 Identities=18% Similarity=0.217 Sum_probs=163.3
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEE-EecCCCeEEEeeCCCCCCccccccccccccCCccceE
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFL-TSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEAS 113 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~-s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (304)
.+..|+........ .+..|. .|.+++|+|++++|+ +++.|+.|++||+.+++..
T Consensus 55 ~i~v~d~~~~~~~~------~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~------------------ 109 (391)
T 1l0q_A 55 DVSIIDTATNNVIA------TVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVA------------------ 109 (391)
T ss_dssp EEEEEETTTTEEEE------EEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE------------------
T ss_pred eEEEEECCCCeEEE------EEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEE------------------
Confidence 35566665554332 344443 899999999999875 5556799999999865331
Q ss_pred EEeecCCeEEEEeecCccceeCCCccEE-EEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE
Q 022019 114 LVVTEGESVYDFCWFPHMSASDPTSCVF-ASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG 191 (304)
Q Consensus 114 ~~~~~~~~v~~~~~~~~~~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~ 191 (304)
....+...+.+++| +|+++.+ ++++.++.|++||+.+++....+..+. .+.+++|+|+++.++ ++
T Consensus 110 ~~~~~~~~~~~~~~-------s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~------~~~~~~~~~dg~~l~~~~ 176 (391)
T 1l0q_A 110 GTVKTGKSPLGLAL-------SPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR------SPKGIAVTPDGTKVYVAN 176 (391)
T ss_dssp EEEECSSSEEEEEE-------CTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCS------SEEEEEECTTSSEEEEEE
T ss_pred EEEeCCCCcceEEE-------CCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCC------CcceEEECCCCCEEEEEe
Confidence 12223345667766 7788876 678889999999999998887776543 668999999999885 55
Q ss_pred -cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEe---cCCeEEEEecCCceEeEEeccccCC
Q 022019 192 -YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS---YSQTSAIYREDNMELLYVLHGQEGG 267 (304)
Q Consensus 192 -~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~---~dg~i~i~d~~~~~~~~~~~~~~~~ 267 (304)
.++.|++||++... ....+ .+...+.+++|+| ++.++++++ .++.|++||+++++++..+..|. .
T Consensus 177 ~~~~~v~~~d~~~~~----~~~~~-----~~~~~~~~~~~~~-~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~ 245 (391)
T 1l0q_A 177 FDSMSISVIDTVTNS----VIDTV-----KVEAAPSGIAVNP-EGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP-D 245 (391)
T ss_dssp TTTTEEEEEETTTTE----EEEEE-----ECSSEEEEEEECT-TSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCS-S
T ss_pred CCCCEEEEEECCCCe----EEEEE-----ecCCCccceEECC-CCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCC-C
Confidence 78999999998641 11111 1344688999999 566666666 68999999999999998888654 5
Q ss_pred eEEEEECCCCcEEE-EeeccCCeEEEEecccceee
Q 022019 268 VTHVQFSRDGNYLY-TGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 268 v~~~~~~~~~~~l~-~~~~~d~~i~vwd~~~~~~~ 301 (304)
+.+++|+|+|++|+ +++ .|+.|++||+.+++.+
T Consensus 246 ~~~~~~s~dg~~l~~s~~-~d~~v~v~d~~~~~~~ 279 (391)
T 1l0q_A 246 PAGIAVTPDGKKVYVALS-FXNTVSVIDTATNTIT 279 (391)
T ss_dssp EEEEEECTTSSEEEEEET-TTTEEEEEETTTTEEE
T ss_pred ccEEEEccCCCEEEEEcC-CCCEEEEEECCCCcEE
Confidence 78999999999885 555 8999999999988654
No 122
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.95 E-value=1.2e-25 Score=187.43 Aligned_cols=225 Identities=13% Similarity=0.163 Sum_probs=169.8
Q ss_pred eeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEE
Q 022019 36 LIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLV 115 (304)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (304)
+..|+......... .....+.+|.+.|.+++|+|++.++++++.|+.|++||+.++.... ..
T Consensus 146 i~~~d~~~g~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~-----------------~~ 207 (433)
T 3bws_A 146 MDVLDINSGQTVRL-SPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKA-----------------TV 207 (433)
T ss_dssp EEEEETTTCCEEEE-CCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEE-----------------EE
T ss_pred EEEEECCCCeEeee-cCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEE-----------------EE
Confidence 55566554433321 1111346899999999999999999999999999999997543321 22
Q ss_pred eecCCeEEEEeecCccceeCCCccEEE-EEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-c-
Q 022019 116 VTEGESVYDFCWFPHMSASDPTSCVFA-STTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-Y- 192 (304)
Q Consensus 116 ~~~~~~v~~~~~~~~~~~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~- 192 (304)
..+...+.+++| +|+++.++ +++.|+.|++||+++++....+..+. .+.+++|+|+++.++++ .
T Consensus 208 ~~~~~~~~~~~~-------~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~------~~~~~~~~~~g~~l~~~~~~ 274 (433)
T 3bws_A 208 DLTGKWSKILLY-------DPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIG------LPRGLLLSKDGKELYIAQFS 274 (433)
T ss_dssp ECSSSSEEEEEE-------ETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCS------EEEEEEECTTSSEEEEEEEE
T ss_pred cCCCCCeeEEEE-------cCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCC------CceEEEEcCCCCEEEEEECC
Confidence 234567777777 66887775 55589999999999998877665533 68899999999988854 2
Q ss_pred -------CCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEecccc
Q 022019 193 -------NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQE 265 (304)
Q Consensus 193 -------d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 265 (304)
|+.|++||++... .... ..+...+.+++|+|++..++++++.|+.|++||+.+++.+..+. +.
T Consensus 275 ~~~~~~~dg~i~~~d~~~~~----~~~~-----~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~ 344 (433)
T 3bws_A 275 ASNQESGGGRLGIYSMDKEK----LIDT-----IGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VF 344 (433)
T ss_dssp SCTTCSCCEEEEEEETTTTE----EEEE-----EEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CS
T ss_pred CCccccCCCeEEEEECCCCc----EEee-----ccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CC
Confidence 7899999998631 1111 12344688999999555677888999999999999999888886 67
Q ss_pred CCeEEEEECCCCcEEEEeecc--------------CCeEEEEecccceee
Q 022019 266 GGVTHVQFSRDGNYLYTGGRK--------------DPYILCWDLRKAVQV 301 (304)
Q Consensus 266 ~~v~~~~~~~~~~~l~~~~~~--------------d~~i~vwd~~~~~~~ 301 (304)
..+.+++|+|+|++|++++.. ||.|++||+.+++.+
T Consensus 345 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~ 394 (433)
T 3bws_A 345 DKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVK 394 (433)
T ss_dssp SSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEE
T ss_pred CCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEE
Confidence 789999999999999988722 579999999988654
No 123
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.95 E-value=1.6e-25 Score=181.93 Aligned_cols=203 Identities=10% Similarity=0.059 Sum_probs=142.2
Q ss_pred ceeEEEEcCCCCeE-EEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCc----------
Q 022019 62 FLKGIKWSPDGSSF-LTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPH---------- 130 (304)
Q Consensus 62 ~V~~i~~s~~~~~l-~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---------- 130 (304)
.+..+++.++++.+ ++++.|++|++||+.+++...... +...|.++.+.+.
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~------------------~~~~v~~v~~~~~~~~~~~~~~i 121 (355)
T 3vu4_A 60 HLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK------------------VDAPVKDLFLSREFIVVSYGDVI 121 (355)
T ss_dssp CCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE------------------CSSCEEEEEECSSEEEEEETTEE
T ss_pred CeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE------------------CCCceEEEEEcCCEEEEEEcCEE
Confidence 58889999988877 567788999999998775533221 1112222222111
Q ss_pred --------------------cceeCCCccEEEE--EeCCCCEEEEEcCCCe----------------eeEEeeccccccc
Q 022019 131 --------------------MSASDPTSCVFAS--TTRDHPIHLWDATTGL----------------LRCTYRAYDAVDE 172 (304)
Q Consensus 131 --------------------~~~~~~~~~~l~~--~~~dg~i~i~d~~~~~----------------~~~~~~~~~~~~~ 172 (304)
..++++ .++++ |+.||.|++||+.++. ....+..|.
T Consensus 122 ~i~d~~~~~~~~~~~~~~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~---- 195 (355)
T 3vu4_A 122 SVFKFGNPWKRITDDIRFGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHT---- 195 (355)
T ss_dssp EEEESSTTCCBSSCCEEEEEEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCS----
T ss_pred EEEECCCCceeeEEeccCCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccC----
Confidence 112233 34555 5889999999998765 134455444
Q ss_pred ccceEEEEECCCCcEEEEE-cCCe-EEEEEcCCCCccceeeeeeeccccc-cccceeEEEeecCCCcEEEEEecCCeEEE
Q 022019 173 ITAAFSVAFNPTGTKIFAG-YNKS-VRVFDVHRPGRDFEKYSTLKGNKEG-QAGIMSAIAFSPTHTGMLAIGSYSQTSAI 249 (304)
Q Consensus 173 ~~~v~~i~~~~~~~~l~~~-~d~~-i~v~d~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~~~~~dg~i~i 249 (304)
..|.+++|+|++++|+++ .|++ |++||++++. ....+. .+ |...|.+++|+| ++.+|++++.|+.|++
T Consensus 196 -~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~----~~~~~~---~g~h~~~v~~~~~s~-~~~~l~s~s~d~~v~i 266 (355)
T 3vu4_A 196 -NPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGV----LVREFR---RGLDRADVVDMKWST-DGSKLAVVSDKWTLHV 266 (355)
T ss_dssp -SCEEEEEECTTSSEEEEEETTCSEEEEEETTTCC----EEEEEE---CTTCCSCEEEEEECT-TSCEEEEEETTCEEEE
T ss_pred -CceEEEEECCCCCEEEEEeCCCCEEEEEECCCCc----EEEEEE---cCCCCCcEEEEEECC-CCCEEEEEECCCEEEE
Confidence 499999999999999965 9998 9999998742 112221 24 788899999999 7889999999999999
Q ss_pred EecCCceE--eEEec---------------------cccCCeEEEEECCCCcEEEEeeccCCeEEEEecccc
Q 022019 250 YREDNMEL--LYVLH---------------------GQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 250 ~d~~~~~~--~~~~~---------------------~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~ 298 (304)
||++.... ...+. .+......++|+|+|++|++++ .||.+++|++..+
T Consensus 267 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~-~dg~~~~~~~~~~ 337 (355)
T 3vu4_A 267 FEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWP-HTRMIETFKVVFD 337 (355)
T ss_dssp EESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEET-TTTEEEEEEEEEE
T ss_pred EEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEe-CCCeEEEEEEEcC
Confidence 99975421 11111 1122346799999999999999 9999999998764
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.95 E-value=1.8e-24 Score=180.47 Aligned_cols=215 Identities=11% Similarity=0.066 Sum_probs=161.3
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEE-EecCCCeEEEeeCCCCCCccccccccccccCCccceE
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFL-TSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEAS 113 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~-s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (304)
.+..|+....... ..+..|...+.+++|+|++++++ +++.|+.|++||+.++....
T Consensus 192 ~v~~~d~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~----------------- 248 (433)
T 3bws_A 192 AVHVFDLKTLAYK------ATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIR----------------- 248 (433)
T ss_dssp EEEEEETTTCCEE------EEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEE-----------------
T ss_pred EEEEEECCCceEE------EEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEE-----------------
Confidence 3455665544333 35668899999999999999875 55589999999997653321
Q ss_pred EEeecCCeEEEEeecCccceeCCCccEEEEEe--------CCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCC
Q 022019 114 LVVTEGESVYDFCWFPHMSASDPTSCVFASTT--------RDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTG 185 (304)
Q Consensus 114 ~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~--------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~ 185 (304)
.......+..++| +|+++.+++++ .||.|++||+.+++....+.... .+.+++|+|++
T Consensus 249 -~~~~~~~~~~~~~-------~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~------~~~~~~~~~~g 314 (433)
T 3bws_A 249 -KTDKIGLPRGLLL-------SKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPG------NKRHIVSGNTE 314 (433)
T ss_dssp -ECCCCSEEEEEEE-------CTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEE------CEEEEEECSST
T ss_pred -EecCCCCceEEEE-------cCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCC------CcceEEECCCC
Confidence 1122244666666 78998888887 58899999999988766553222 67899999999
Q ss_pred cEEE-EE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEec---------------CCeEE
Q 022019 186 TKIF-AG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSY---------------SQTSA 248 (304)
Q Consensus 186 ~~l~-~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~---------------dg~i~ 248 (304)
+.++ ++ .++.|++||++.. . ....+ .+...+.+++|+| ++.++++++. ||.|+
T Consensus 315 ~~l~~~~~~~~~v~v~d~~~~-~---~~~~~-----~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~ 384 (433)
T 3bws_A 315 NKIYVSDMCCSKIEVYDLKEK-K---VQKSI-----PVFDKPNTIALSP-DGKYLYVSCRGPNHPTEGYLKKGLVLGKVY 384 (433)
T ss_dssp TEEEEEETTTTEEEEEETTTT-E---EEEEE-----ECSSSEEEEEECT-TSSEEEEEECCCCCTTTCTTSCCSSCCEEE
T ss_pred CEEEEEecCCCEEEEEECCCC-c---EEEEe-----cCCCCCCeEEEcC-CCCEEEEEecCCCccccccccccccceEEE
Confidence 7665 54 8999999999853 1 11221 2345688999999 6666777665 57999
Q ss_pred EEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEeccc
Q 022019 249 IYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 249 i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~ 297 (304)
+||+.+++.+..+.. ...+.+++|+|+|++|++++..|+.|++|+++.
T Consensus 385 ~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 385 VIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp EEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred EEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 999999999888875 457899999999999998873599999999864
No 125
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.94 E-value=8e-25 Score=176.80 Aligned_cols=173 Identities=16% Similarity=0.230 Sum_probs=136.4
Q ss_pred EEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCe----eeEEeecccccccccceEEEEECC--CCcE
Q 022019 114 LVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGL----LRCTYRAYDAVDEITAAFSVAFNP--TGTK 187 (304)
Q Consensus 114 ~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~~~~~~v~~i~~~~--~~~~ 187 (304)
+...|...|.+++| +|++++|++++.||.|++||+.++. ....+..+.. .|.+++|+| ++++
T Consensus 6 ~~~gH~~~v~~~~~-------~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~d~~~ 73 (351)
T 3f3f_A 6 FDSGHDDLVHDVVY-------DFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDS-----SIVAIDWASPEYGRI 73 (351)
T ss_dssp EECCCSSCEEEEEE-------CSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSS-----CEEEEEECCGGGCSE
T ss_pred cCcccccceeEEEE-------cCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCC-----cEEEEEEcCCCCCCE
Confidence 55678899999988 7789999999999999999998763 4444444443 899999999 5888
Q ss_pred EEEE-cCCeEEEEEcCCCCcccee-eeeeeccccccccceeEEEeecCC--CcEEEEEecCCeEEEEecCCce-------
Q 022019 188 IFAG-YNKSVRVFDVHRPGRDFEK-YSTLKGNKEGQAGIMSAIAFSPTH--TGMLAIGSYSQTSAIYREDNME------- 256 (304)
Q Consensus 188 l~~~-~d~~i~v~d~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~p~~--~~~l~~~~~dg~i~i~d~~~~~------- 256 (304)
|+++ .|+.|++||++........ ..........|...|.+++|+| + +.+|++++.||.|++||+++++
T Consensus 74 l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~ 152 (351)
T 3f3f_A 74 IASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAP-AHLGLKLACLGNDGILRLYDALEPSDLRSWTL 152 (351)
T ss_dssp EEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECC-GGGCSEEEEEETTCEEEEEECSSTTCTTCCEE
T ss_pred EEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcC-CCCCcEEEEecCCCcEEEecCCChHHhccccc
Confidence 8865 9999999999874321100 0011222356888999999999 6 7899999999999999986432
Q ss_pred -----------------------------------------------------EeEEeccccCCeEEEEECCCC----cE
Q 022019 257 -----------------------------------------------------LLYVLHGQEGGVTHVQFSRDG----NY 279 (304)
Q Consensus 257 -----------------------------------------------------~~~~~~~~~~~v~~~~~~~~~----~~ 279 (304)
.+..+.+|...|++++|+|++ .+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~ 232 (351)
T 3f3f_A 153 TSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQL 232 (351)
T ss_dssp EEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEE
T ss_pred cccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceE
Confidence 144566789999999999998 89
Q ss_pred EEEeeccCCeEEEEeccccee
Q 022019 280 LYTGGRKDPYILCWDLRKAVQ 300 (304)
Q Consensus 280 l~~~~~~d~~i~vwd~~~~~~ 300 (304)
|++++ .||.|++||++++..
T Consensus 233 l~s~~-~dg~i~iwd~~~~~~ 252 (351)
T 3f3f_A 233 IATGC-KDGRIRIFKITEKLS 252 (351)
T ss_dssp EEEEE-TTSCEEEEEEEECC-
T ss_pred EEEEc-CCCeEEEEeCCCCcC
Confidence 99999 999999999987643
No 126
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.94 E-value=1.1e-23 Score=174.41 Aligned_cols=214 Identities=13% Similarity=0.074 Sum_probs=155.7
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCC---eEEEeeCCCCCCccccccccccccCCccc
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDK---TLRIFSLPENGISYDVNACSLAKDQDSYE 111 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg---~v~vwd~~~~~~~~~~~~~~~~~~~~~~~ 111 (304)
.+..|+..... .+.+.+|...|.+++|+|+|++|++++.|+ .|++||+.+++..
T Consensus 160 ~i~i~d~~g~~-------~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~---------------- 216 (415)
T 2hqs_A 160 ELRVSDYDGYN-------QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR---------------- 216 (415)
T ss_dssp EEEEEETTSCS-------CEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE----------------
T ss_pred eEEEEcCCCCC-------CEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE----------------
Confidence 45667664321 235667899999999999999999999875 9999999865321
Q ss_pred eEEEeecCCeEEEEeecCccceeCCCccEEE-EEeCCCC--EEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEE
Q 022019 112 ASLVVTEGESVYDFCWFPHMSASDPTSCVFA-STTRDHP--IHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKI 188 (304)
Q Consensus 112 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~-~~~~dg~--i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l 188 (304)
....+...+.+++| +|+|+.|+ +++.++. |++||+.+++.. .+..+. ..+.+++|+|+|+.|
T Consensus 217 --~l~~~~~~~~~~~~-------spdg~~la~~~~~~g~~~i~~~d~~~~~~~-~l~~~~-----~~~~~~~~spdg~~l 281 (415)
T 2hqs_A 217 --QVASFPRHNGAPAF-------SPDGSKLAFALSKTGSLNLYVMDLASGQIR-QVTDGR-----SNNTEPTWFPDSQNL 281 (415)
T ss_dssp --EEECCSSCEEEEEE-------CTTSSEEEEEECTTSSCEEEEEETTTCCEE-ECCCCS-----SCEEEEEECTTSSEE
T ss_pred --EeecCCCcccCEEE-------cCCCCEEEEEEecCCCceEEEEECCCCCEE-eCcCCC-----CcccceEECCCCCEE
Confidence 22234456777777 88999777 6666665 999999887653 343333 278899999999988
Q ss_pred EE-Ec-CC--eEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecC---CeEEEEecCCceEeEEe
Q 022019 189 FA-GY-NK--SVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS---QTSAIYREDNMELLYVL 261 (304)
Q Consensus 189 ~~-~~-d~--~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~ 261 (304)
+. +. ++ .|++||+.... . ..+ ..+...+.+++|+| ++.+|++++.+ ..|++||+.+++.. .+
T Consensus 282 ~~~s~~~g~~~i~~~d~~~~~--~---~~l----~~~~~~~~~~~~sp-dG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l 350 (415)
T 2hqs_A 282 AFTSDQAGRPQVYKVNINGGA--P---QRI----TWEGSQNQDADVSS-DGKFMVMVSSNGGQQHIAKQDLATGGVQ-VL 350 (415)
T ss_dssp EEEECTTSSCEEEEEETTSSC--C---EEC----CCSSSEEEEEEECT-TSSEEEEEEECSSCEEEEEEETTTCCEE-EC
T ss_pred EEEECCCCCcEEEEEECCCCC--E---EEE----ecCCCcccCeEECC-CCCEEEEEECcCCceEEEEEECCCCCEE-Ee
Confidence 84 43 45 67777886532 1 111 23445688999999 66677776654 58999999988764 45
Q ss_pred ccccCCeEEEEECCCCcEEEEeeccCC---eEEEEecccce
Q 022019 262 HGQEGGVTHVQFSRDGNYLYTGGRKDP---YILCWDLRKAV 299 (304)
Q Consensus 262 ~~~~~~v~~~~~~~~~~~l~~~~~~d~---~i~vwd~~~~~ 299 (304)
..+. .+.+++|+|+|++|++++ .++ .|++||+..+.
T Consensus 351 ~~~~-~~~~~~~spdg~~l~~~s-~~~~~~~l~~~d~~g~~ 389 (415)
T 2hqs_A 351 SSTF-LDETPSLAPNGTMVIYSS-SQGMGSVLNLVSTDGRF 389 (415)
T ss_dssp CCSS-SCEEEEECTTSSEEEEEE-EETTEEEEEEEETTSCC
T ss_pred cCCC-CcCCeEEcCCCCEEEEEE-cCCCccEEEEEECCCCc
Confidence 5554 899999999999999988 665 89999987543
No 127
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.93 E-value=1.8e-24 Score=179.90 Aligned_cols=217 Identities=15% Similarity=0.082 Sum_probs=149.8
Q ss_pred CCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCcc
Q 022019 60 NNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSC 139 (304)
Q Consensus 60 ~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 139 (304)
...++.+++++++.++++++.|+ +++|+.............. .............+...|.+++| +|+++
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~l~~-------spdg~ 105 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDP--NKIVDKVQGLLVPMKFPIHHLAL-------SCDNL 105 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCT--TCEEECCCCEEECCSSCEEEEEE-------CTTSC
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCc--ccccccCccccccCCCcccEEEE-------cCCCC
Confidence 44689999999999999999887 8998764221100000000 00000111123445567888888 77899
Q ss_pred EEE----EEeCCCCEEEEEcCCC--------eeeEEeecccccccccceEEEEECCC-CcEEEEE-cCCeEEEEEcCCCC
Q 022019 140 VFA----STTRDHPIHLWDATTG--------LLRCTYRAYDAVDEITAAFSVAFNPT-GTKIFAG-YNKSVRVFDVHRPG 205 (304)
Q Consensus 140 ~l~----~~~~dg~i~i~d~~~~--------~~~~~~~~~~~~~~~~~v~~i~~~~~-~~~l~~~-~d~~i~v~d~~~~~ 205 (304)
+|+ +++.|+.|++||+.++ +....+.... .|...|.+++|+|+ +.+|+++ .||+|++||++...
T Consensus 106 ~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~--~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~ 183 (434)
T 2oit_A 106 TLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLK--DAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETV 183 (434)
T ss_dssp EEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCC--SGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSE
T ss_pred EEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccC--CCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCc
Confidence 999 7888999999998754 2222222211 23448999999998 7888854 99999999998741
Q ss_pred ccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccc-------cCCeEEEEECCCCc
Q 022019 206 RDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQ-------EGGVTHVQFSRDGN 278 (304)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------~~~v~~~~~~~~~~ 278 (304)
... ...+|...+.+++|+| ++.+|++|+.||.|++||.+ ++....+..| ...|.+++|++++.
T Consensus 184 ----~~~----~~~~~~~~v~~v~wsp-dg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~ 253 (434)
T 2oit_A 184 ----KVC----ATLPSTVAVTSVCWSP-KGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYV 253 (434)
T ss_dssp ----EEE----EEECGGGCEEEEEECT-TSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTE
T ss_pred ----cee----eccCCCCceeEEEEcC-CCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCce
Confidence 111 1134677899999999 68899999999999999998 5555555433 23799999999998
Q ss_pred EEEEeeccCC------eEEEEecccc
Q 022019 279 YLYTGGRKDP------YILCWDLRKA 298 (304)
Q Consensus 279 ~l~~~~~~d~------~i~vwd~~~~ 298 (304)
++++.+..|| .+++|++++.
T Consensus 254 ~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 254 FAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred EEEEEccCCCccCCCCceEEEEeccC
Confidence 8866543443 3899999865
No 128
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.92 E-value=5.2e-23 Score=162.47 Aligned_cols=219 Identities=14% Similarity=0.131 Sum_probs=152.7
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCC-CCCccccccccccccCCccceE
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPE-NGISYDVNACSLAKDQDSYEAS 113 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~ 113 (304)
.+..|+....... .+..|...|.+++|+|+|++|++++ ++.|.+||+.+ +........
T Consensus 23 ~i~~~d~~~~~~~-------~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~------------- 81 (297)
T 2ojh_A 23 SIEIFNIRTRKMR-------VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTG------------- 81 (297)
T ss_dssp EEEEEETTTTEEE-------EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCT-------------
T ss_pred eEEEEeCCCCcee-------eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccc-------------
Confidence 4566776654332 3445788999999999999999887 78999999986 533211100
Q ss_pred EEeecCCeEEEEeecCccceeCCCccEEEEEe--CCCCEEEEEc--CCCeeeEEeecccccccccceEEEEECCCCcEEE
Q 022019 114 LVVTEGESVYDFCWFPHMSASDPTSCVFASTT--RDHPIHLWDA--TTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF 189 (304)
Q Consensus 114 ~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~--~dg~i~i~d~--~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~ 189 (304)
.+...+.+++| +|++++|++++ .++...||.+ .++.. ..+.... .+..++|+|+++.++
T Consensus 82 ---~~~~~~~~~~~-------spdg~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~------~~~~~~~spdg~~l~ 144 (297)
T 2ojh_A 82 ---FATICNNDHGI-------SPDGALYAISDKVEFGKSAIYLLPSTGGTP-RLMTKNL------PSYWHGWSPDGKSFT 144 (297)
T ss_dssp ---TCCCBCSCCEE-------CTTSSEEEEEECTTTSSCEEEEEETTCCCC-EECCSSS------SEEEEEECTTSSEEE
T ss_pred ---cccccccceEE-------CCCCCEEEEEEeCCCCcceEEEEECCCCce-EEeecCC------CccceEECCCCCEEE
Confidence 01134445555 88999999998 3345555554 44442 2232222 578899999999887
Q ss_pred -EE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEE-ecCCeEEEEecC-CceEeEEecccc
Q 022019 190 -AG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIG-SYSQTSAIYRED-NMELLYVLHGQE 265 (304)
Q Consensus 190 -~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~-~~dg~i~i~d~~-~~~~~~~~~~~~ 265 (304)
++ .++.+++|+++....... . ...+...+.+++|+| ++..|+++ ..++.+++|++. .+..+..+..|.
T Consensus 145 ~~~~~~~~~~l~~~~~~~~~~~---~----~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 216 (297)
T 2ojh_A 145 YCGIRDQVFDIYSMDIDSGVET---R----LTHGEGRNDGPDYSP-DGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSA 216 (297)
T ss_dssp EEEEETTEEEEEEEETTTCCEE---E----CCCSSSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTSSCEEECCCCS
T ss_pred EEECCCCceEEEEEECCCCcce---E----cccCCCccccceECC-CCCEEEEEecCCCCccEEEECCCCCCcEEEecCC
Confidence 55 899999999754322211 1 134556789999999 55555544 468999999886 455667777788
Q ss_pred CCeEEEEECCCCcEEEEeeccC-----------CeEEEEeccccee
Q 022019 266 GGVTHVQFSRDGNYLYTGGRKD-----------PYILCWDLRKAVQ 300 (304)
Q Consensus 266 ~~v~~~~~~~~~~~l~~~~~~d-----------~~i~vwd~~~~~~ 300 (304)
..+.+++|+|+|++|++++ .+ +.|.+||+.+++.
T Consensus 217 ~~~~~~~~s~dg~~l~~~~-~~~~~~~~~~~~~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 217 YGDWFPHPSPSGDKVVFVS-YDADVFDHPRDLDVRVQLMDMDGGNV 261 (297)
T ss_dssp EEEEEEEECTTSSEEEEEE-EETTCCSCCSSEEEEEEEEETTSCSC
T ss_pred cccCCeEECCCCCEEEEEE-cCCCCCcccccCceEEEEEecCCCCc
Confidence 8899999999999999888 54 5799999988754
No 129
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.92 E-value=8.5e-23 Score=160.14 Aligned_cols=208 Identities=11% Similarity=0.110 Sum_probs=131.0
Q ss_pred ceeEEEEcCCCC---eEEEecCCCeEEEeeCCCC---CCccccccccccccCCccceEEEeecCCeEEEEeecC------
Q 022019 62 FLKGIKWSPDGS---SFLTSSEDKTLRIFSLPEN---GISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFP------ 129 (304)
Q Consensus 62 ~V~~i~~s~~~~---~l~s~~~dg~v~vwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~------ 129 (304)
.|.++.|-..|- .+++++. ..|++|+..+. +..+. ...+..+|..+.+.|
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~~~~~~~~-----------------~~~~~~~v~~~~~~~~~~~~~ 102 (356)
T 2w18_A 41 DVSAMFWERAGCKEPCIITACE-DVVSLWKALDAWQWEKLYT-----------------WHFAEVPVLQIVPVPDVYNLV 102 (356)
T ss_dssp EEEEEEEC----CEEEEEEEES-SEEEEEEESSSSBEEEEEE-----------------EECCSSCEEEECCCTTCCSCE
T ss_pred EEeeeeeccCCCCccEEEEecc-ceEEEcccCCCccceeeEE-----------------EeccCceeEEEEEcCccccee
Confidence 366777765443 6777775 58999999876 22111 111222333333333
Q ss_pred ------------ccceeCCC----ccEEEEEeC--------------------CCCEEEEEcC-CCeeeEEeeccccccc
Q 022019 130 ------------HMSASDPT----SCVFASTTR--------------------DHPIHLWDAT-TGLLRCTYRAYDAVDE 172 (304)
Q Consensus 130 ------------~~~~~~~~----~~~l~~~~~--------------------dg~i~i~d~~-~~~~~~~~~~~~~~~~ 172 (304)
..++++|+ ++++++++. |+.|++|++. +++....+..+..
T Consensus 103 ~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~--- 179 (356)
T 2w18_A 103 CVALGNLEIREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPP--- 179 (356)
T ss_dssp EEEECSSSEEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCC---
T ss_pred eeeeccccccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCC---
Confidence 12344666 666665543 7777778773 3666665555544
Q ss_pred ccceEEEEECC---CCcEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEE----------
Q 022019 173 ITAAFSVAFNP---TGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGML---------- 238 (304)
Q Consensus 173 ~~~v~~i~~~~---~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l---------- 238 (304)
.+..++|+| ++..|+++ .|++|+|||+.++. .+..+... ..+...+.+++|+| ++.++
T Consensus 180 --~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk----~l~tL~g~-~~~v~~v~~vafSp-dG~~lvs~s~~~~~w 251 (356)
T 2w18_A 180 --EETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQ----LLKKMHID-DSYQASVCHKAYSE-MGLLFIVLSHPCAKE 251 (356)
T ss_dssp --SSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCC----EEEEEECC-C---CCCEEEEEEE-TTEEEEEEC------
T ss_pred --ceeeEEeeccCCCCceEEEecCCCcEEEEECCCCc----EEEEEcCC-CcceeeeEEEEECC-CCCEEEEeccCCCcc
Confidence 677888888 67889864 99999999998742 22333211 11234577889999 56655
Q ss_pred --EEEecCCeEEEEecCCceEeEEe-----ccccCCeEEEEECCCCcEEEEeeccCCeEEEEecccceee
Q 022019 239 --AIGSYSQTSAIYREDNMELLYVL-----HGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 239 --~~~~~dg~i~i~d~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
++|+.|++|++||..+++.+..+ .+|...+.+..++ +.++++++ .|++|+|||+.+++++
T Consensus 252 ~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS-~DgTIkIWDl~tGk~l 318 (356)
T 2w18_A 252 SESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAIL-TSGTIAIWDLLLGQCT 318 (356)
T ss_dssp ------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEE-TTSCEEEEETTTCSEE
T ss_pred eeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEc-CCCcEEEEECCCCcEE
Confidence 66888999999999999887665 3676666555554 88999999 9999999999999765
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.91 E-value=5.6e-22 Score=169.18 Aligned_cols=209 Identities=13% Similarity=0.118 Sum_probs=142.6
Q ss_pred eeEEEEcCCCCeEEEecCCCeEEEeeC--CCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCC----
Q 022019 63 LKGIKWSPDGSSFLTSSEDKTLRIFSL--PENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDP---- 136 (304)
Q Consensus 63 V~~i~~s~~~~~l~s~~~dg~v~vwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~---- 136 (304)
+.+++|+|+|++|++++.|++|++||+ .+++... .+..+.....++ |+|
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~------------------~i~~g~~p~~va-------~sp~~~~ 235 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVA------------------EIKIGIEARSVE-------SSKFKGY 235 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEE------------------EEECCSEEEEEE-------ECCSTTC
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEE------------------EEecCCCcceEE-------eCCCcCC
Confidence 889999999999999999999999999 4432211 112223333333 366
Q ss_pred CccEEEEEeC-CCCEEEEEcCCCeeeEEeeccc----------c------------------------------------
Q 022019 137 TSCVFASTTR-DHPIHLWDATTGLLRCTYRAYD----------A------------------------------------ 169 (304)
Q Consensus 137 ~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~----------~------------------------------------ 169 (304)
+|+++++++. +++|.+||..+++.+..+.... .
T Consensus 236 dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l 315 (543)
T 1nir_A 236 EDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNL 315 (543)
T ss_dssp TTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSC
T ss_pred CCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcc
Confidence 6766666653 6677777766665554443210 0
Q ss_pred ----cccccceEEEEECCCCcEEE-EE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEe-
Q 022019 170 ----VDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS- 242 (304)
Q Consensus 170 ----~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~- 242 (304)
......+.++.|+|+|++++ ++ .+++|.+||+.++ +....+......|.+....+ ++|+++.+++++.
T Consensus 316 ~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg----~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~ 390 (543)
T 1nir_A 316 TVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDR----RLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHL 390 (543)
T ss_dssp EEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTT----EEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBS
T ss_pred eeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCC----eEEEeeccCCCCCCCCCccc-CCCCCccEEEeccC
Confidence 00011345678899998777 44 6889999998764 12222221112343333333 5785677778776
Q ss_pred cCCeEEEEecCC-------ceEeEEeccccCCeEEEEECCCCcEEEEeec------cCCeEEEEecccceee
Q 022019 243 YSQTSAIYREDN-------MELLYVLHGQEGGVTHVQFSRDGNYLYTGGR------KDPYILCWDLRKAVQV 301 (304)
Q Consensus 243 ~dg~i~i~d~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------~d~~i~vwd~~~~~~~ 301 (304)
.|++|.+||+.+ ++++.++.+|...+..+.++|+|++|++++. .+++|.|||+.+++.+
T Consensus 391 ~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~ 462 (543)
T 1nir_A 391 GDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAK 462 (543)
T ss_dssp SSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSC
T ss_pred CCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCC
Confidence 589999999988 8999999999888899999999999998861 1679999999987654
No 131
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.91 E-value=2e-22 Score=166.97 Aligned_cols=220 Identities=14% Similarity=0.119 Sum_probs=158.5
Q ss_pred ceeeecC--CCcccccccceeeeecCCCCceeEEEEcC--------------CCCeEEEecCC------CeEEEeeCCCC
Q 022019 35 PLIRFDV--PPHRTYHFYNQFRTSSIPNNFLKGIKWSP--------------DGSSFLTSSED------KTLRIFSLPEN 92 (304)
Q Consensus 35 ~~~~~~~--~~~~~~~~~~~~~~~~~h~~~V~~i~~s~--------------~~~~l~s~~~d------g~v~vwd~~~~ 92 (304)
.+.+||+ ...+... -..+.+|...+..+++++ .+..++.++.+ +.|++||+...
T Consensus 94 ~i~lwd~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~ 169 (415)
T 2hqs_A 94 AYQLVDTGGAPGTVLA----QNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGY 169 (415)
T ss_dssp EEEEEECSSSTTCEEE----EEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSC
T ss_pred EEEEEeCCCCCCCEEe----eeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCC
Confidence 4567887 5554331 125678888888888775 15666666554 79999998632
Q ss_pred CCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCC---CEEEEEcCCCeeeEEeecccc
Q 022019 93 GISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDH---PIHLWDATTGLLRCTYRAYDA 169 (304)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~ 169 (304)
.. .....+...+.+++| +|+|+.|++++.++ .|++||+.+++... +..+..
T Consensus 170 ~~------------------~~l~~~~~~v~~~~~-------Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~-l~~~~~ 223 (415)
T 2hqs_A 170 NQ------------------FVVHRSPQPLMSPAW-------SPDGSKLAYVTFESGRSALVIQTLANGAVRQ-VASFPR 223 (415)
T ss_dssp SC------------------EEEEEESSCEEEEEE-------CTTSSEEEEEECTTSSCEEEEEETTTCCEEE-EECCSS
T ss_pred CC------------------EEEeCCCCcceeeEE-------cCCCCEEEEEEecCCCcEEEEEECCCCcEEE-eecCCC
Confidence 11 133456678888888 88999999999875 89999999887653 333332
Q ss_pred cccccceEEEEECCCCcEEE-EE-cCC--eEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEec-C
Q 022019 170 VDEITAAFSVAFNPTGTKIF-AG-YNK--SVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSY-S 244 (304)
Q Consensus 170 ~~~~~~v~~i~~~~~~~~l~-~~-~d~--~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~-d 244 (304)
.+.+++|+|+|+.|+ ++ .++ .|++||+.+... .. ...+...+.+++|+| ++..|++++. +
T Consensus 224 -----~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-----~~----l~~~~~~~~~~~~sp-dg~~l~~~s~~~ 288 (415)
T 2hqs_A 224 -----HNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-----RQ----VTDGRSNNTEPTWFP-DSQNLAFTSDQA 288 (415)
T ss_dssp -----CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-----EE----CCCCSSCEEEEEECT-TSSEEEEEECTT
T ss_pred -----cccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-----Ee----CcCCCCcccceEECC-CCCEEEEEECCC
Confidence 788999999999888 54 444 599999976321 11 144566789999999 5666666665 4
Q ss_pred C--eEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeecc--CCeEEEEeccccee
Q 022019 245 Q--TSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRK--DPYILCWDLRKAVQ 300 (304)
Q Consensus 245 g--~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~--d~~i~vwd~~~~~~ 300 (304)
+ .|++||+.+++. ..+..+...+.+++|+|+|++|++++.. +..|.+||+.+++.
T Consensus 289 g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~ 347 (415)
T 2hqs_A 289 GRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV 347 (415)
T ss_dssp SSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE
T ss_pred CCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE
Confidence 5 688889887764 3455577789999999999999988823 25899999988754
No 132
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.91 E-value=1.4e-21 Score=157.09 Aligned_cols=225 Identities=15% Similarity=0.151 Sum_probs=155.1
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecC-CCeEEEeeCCCCCCccccccccccccCCccceE
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSE-DKTLRIFSLPENGISYDVNACSLAKDQDSYEAS 113 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~-dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (304)
.+..|+........ ....+...+ +++|+|+|+++++++. ++.|.+||+.++... ..
T Consensus 21 ~v~~~d~~~~~~~~------~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~----------------~~ 77 (331)
T 3u4y_A 21 RISFFSTDTLEILN------QITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPK----------------VV 77 (331)
T ss_dssp EEEEEETTTCCEEE------EEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCE----------------EE
T ss_pred eEEEEeCcccceee------eEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCcee----------------EE
Confidence 35566666554433 333455566 9999999997666555 889999999865430 00
Q ss_pred EEeecCCeEEEEeecCccceeCCCccEEEEEeCCC---CEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-
Q 022019 114 LVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDH---PIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF- 189 (304)
Q Consensus 114 ~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~- 189 (304)
....+..+..++ +++|++++++++..++ .|.+||+.+++....+.... .+.+++|+|+|++++
T Consensus 78 ~~~~~~~~~~~~-------~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~------~~~~~~~spdg~~l~~ 144 (331)
T 3u4y_A 78 AIQEGQSSMADV-------DITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPY------DAVGIAISPNGNGLIL 144 (331)
T ss_dssp EEEECSSCCCCE-------EECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCT------TEEEEEECTTSSCEEE
T ss_pred ecccCCCCccce-------EECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCC------CccceEECCCCCEEEE
Confidence 111122222223 4588999998655553 89999999998877765533 568999999998666
Q ss_pred EE-cCCe-EEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceE---eEEeccc
Q 022019 190 AG-YNKS-VRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMEL---LYVLHGQ 264 (304)
Q Consensus 190 ~~-~d~~-i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~ 264 (304)
++ .++. |.+|++...+......... ......+..++|+|++..+++++..++.|++||+.+++. +..+..
T Consensus 145 ~~~~~~~~i~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~- 219 (331)
T 3u4y_A 145 IDRSSANTVRRFKIDADGVLFDTGQEF----ISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT- 219 (331)
T ss_dssp EEETTTTEEEEEEECTTCCEEEEEEEE----ECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC-
T ss_pred EecCCCceEEEEEECCCCcEeecCCcc----ccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC-
Confidence 44 5577 9999998543222111111 122334789999995444566666789999999998887 777764
Q ss_pred cCCeEEEEECCCCcEEEEeeccCCeEEEEeccccee
Q 022019 265 EGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQ 300 (304)
Q Consensus 265 ~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~ 300 (304)
...+..++|+|+|++|++++..++.|.+||+.+++.
T Consensus 220 ~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 220 NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTL 255 (331)
T ss_dssp SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEE
T ss_pred CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCce
Confidence 456789999999998877764688999999998865
No 133
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.91 E-value=8.6e-21 Score=153.60 Aligned_cols=232 Identities=10% Similarity=0.103 Sum_probs=147.3
Q ss_pred eecCCCCceeEEEEcCCCCeEEEec-CCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccce
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSS-EDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSA 133 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~-~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 133 (304)
.+..|...+..++|+|+|++|++++ .++.|.+|++................ .... .......+..++|
T Consensus 80 ~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~--~~p~---~~~~~~~~~~~~~------ 148 (347)
T 3hfq_A 80 TVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSG--HGPR---PEQDGSHIHYTDL------ 148 (347)
T ss_dssp EEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCC--CCSS---TTCSSCCEEEEEE------
T ss_pred eeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCC--CCCC---ccccCCCceEEEE------
Confidence 3345677899999999999888887 68999999986322111100000000 0000 0001123455555
Q ss_pred eCCCccEEEEEeCCCCEEEEEcC-CCeeeEEeecccccccccceEEEEECCCCcEEE-EE-cCCeEEEEEcCCCCcccee
Q 022019 134 SDPTSCVFASTTRDHPIHLWDAT-TGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGRDFEK 210 (304)
Q Consensus 134 ~~~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~v~d~~~~~~~~~~ 210 (304)
+|+|+++++...++.|++|++. +++......... .....+..++|+|+|++++ ++ .++.|.+|++.........
T Consensus 149 -spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~--~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~ 225 (347)
T 3hfq_A 149 -TPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTM--EAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQ 225 (347)
T ss_dssp -CTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEEC--CTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEE
T ss_pred -CCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEc--CCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEE
Confidence 8899966666778899999998 554332221111 1112567899999999777 45 7899999999753222222
Q ss_pred eeeeeccccc--cccceeEEEeecCCCcEEEEEecCCeEEEEecC---CceEeEEeccccCCeEEEEECCCCcEEEEeec
Q 022019 211 YSTLKGNKEG--QAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED---NMELLYVLHGQEGGVTHVQFSRDGNYLYTGGR 285 (304)
Q Consensus 211 ~~~~~~~~~~--~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 285 (304)
.........+ ....+..++|+|++..++++...++.|.+|++. ..+.+..+..+...+..++|+|||++|++++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~ 305 (347)
T 3hfq_A 226 LGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQ 305 (347)
T ss_dssp EEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEET
T ss_pred eeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEc
Confidence 2222211111 113478899999444444666678999999997 33566667666667899999999999998884
Q ss_pred cCCeEEEE--eccccee
Q 022019 286 KDPYILCW--DLRKAVQ 300 (304)
Q Consensus 286 ~d~~i~vw--d~~~~~~ 300 (304)
.++.|.+| |..+++.
T Consensus 306 ~~~~v~v~~~d~~tg~l 322 (347)
T 3hfq_A 306 NTDNATLYARDLTSGKL 322 (347)
T ss_dssp TTTEEEEEEECTTTCCE
T ss_pred CCCcEEEEEEeCCCCeE
Confidence 56899999 5455543
No 134
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.90 E-value=4.5e-21 Score=154.70 Aligned_cols=210 Identities=16% Similarity=0.189 Sum_probs=139.7
Q ss_pred ceeEEEEcCCCCeEEEec-CCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccE
Q 022019 62 FLKGIKWSPDGSSFLTSS-EDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCV 140 (304)
Q Consensus 62 ~V~~i~~s~~~~~l~s~~-~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 140 (304)
.+.+++|+|+|++|++++ .++.|.+||+.++... ...........+. .++++|+++.
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~---------------~~~~~~~~~~~~~-------~~~~s~dg~~ 142 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPV---------------GVVDVVEGLDGCH-------SANISPDNRT 142 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEE---------------EEEEEECCCTTBC-------CCEECTTSSE
T ss_pred CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccc---------------cccccccCCCCce-------EEEECCCCCE
Confidence 789999999999876665 4889999998521100 0001111122233 3455889988
Q ss_pred EEEEe-CCCCEEEEEcCC-CeeeEEe--ecccccccccceEEEEECCCCcEEE-EE-cCCeEEEEEcCCCCccceeeeee
Q 022019 141 FASTT-RDHPIHLWDATT-GLLRCTY--RAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGRDFEKYSTL 214 (304)
Q Consensus 141 l~~~~-~dg~i~i~d~~~-~~~~~~~--~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~v~d~~~~~~~~~~~~~~ 214 (304)
+++++ .++.|++||+.+ ++..... .... .....+.+++|+|++++++ ++ .++.|.+||+.............
T Consensus 143 l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~ 220 (343)
T 1ri6_A 143 LWVPALKQDRICLFTVSDDGHLVAQDPAEVTT--VEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTL 220 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEEEEC--STTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEE
T ss_pred EEEecCCCCEEEEEEecCCCceeeeccccccc--CCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeec
Confidence 88777 899999999987 6543322 1111 1112677899999999776 55 78999999996432222222222
Q ss_pred eccccc--cccceeEEEeecCCCcEEEEEecCCeEEEEecC----CceEeEEeccccCCeEEEEECCCCcEEEEeeccCC
Q 022019 215 KGNKEG--QAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED----NMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDP 288 (304)
Q Consensus 215 ~~~~~~--~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~ 288 (304)
.....+ ....+..++|+|++..+++++..++.|.+||+. ..+.+..+..+.. +.+++|+|+|++|++++..++
T Consensus 221 ~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~ 299 (343)
T 1ri6_A 221 DMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSH 299 (343)
T ss_dssp ECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTC
T ss_pred cccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCC
Confidence 211111 123467899999544455566679999999998 3456666665444 889999999999888875689
Q ss_pred eEEEEecc
Q 022019 289 YILCWDLR 296 (304)
Q Consensus 289 ~i~vwd~~ 296 (304)
.|.+|++.
T Consensus 300 ~v~v~~~d 307 (343)
T 1ri6_A 300 HISVYEIV 307 (343)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEc
Confidence 99999554
No 135
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.90 E-value=6.4e-21 Score=153.43 Aligned_cols=229 Identities=14% Similarity=0.083 Sum_probs=155.6
Q ss_pred ceeeecCCCcccccccceeeeec-CCCC-ceeEEEEcCCCCeE-EEecCCCeEEEeeCCCCCCccccccccccccCCccc
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSS-IPNN-FLKGIKWSPDGSSF-LTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYE 111 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~-~h~~-~V~~i~~s~~~~~l-~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~ 111 (304)
.+..|+........ .+. ++.. .+.+++|+|+|+++ +++..++.|.+||+.+++......
T Consensus 12 ~v~~~d~~~~~~~~------~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~------------ 73 (337)
T 1pby_B 12 KLVVIDTEKMAVDK------VITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRID------------ 73 (337)
T ss_dssp EEEEEETTTTEEEE------EEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEE------------
T ss_pred eEEEEECCCCcEEE------EEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEE------------
Confidence 35566665544332 222 2222 48899999999865 556678999999998654321111
Q ss_pred eEEEeecCCeEEEEeecCccceeCCCccEEEEEe------------CCCCEEEEEcCCCeeeEEeecccccccccceEEE
Q 022019 112 ASLVVTEGESVYDFCWFPHMSASDPTSCVFASTT------------RDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSV 179 (304)
Q Consensus 112 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i 179 (304)
..+... ..-.|..++++|+++.+++++ .++.|.+||+.+++....+.... .+.++
T Consensus 74 ----~~~~~~---~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~------~~~~~ 140 (337)
T 1pby_B 74 ----LSTPEE---RVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPR------QITML 140 (337)
T ss_dssp ----CCBTTE---EEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCS------SCCCE
T ss_pred ----cCCccc---ccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCC------Cccee
Confidence 110000 011244456689999888886 57999999999988776665432 56789
Q ss_pred EECCCCcEEEEEcCCeEEEEEcCCCCccceeeee----------------------------------------------
Q 022019 180 AFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYST---------------------------------------------- 213 (304)
Q Consensus 180 ~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~~---------------------------------------------- 213 (304)
+|+|++++++++ ++.|++||+..... ...+..
T Consensus 141 ~~s~dg~~l~~~-~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (337)
T 1pby_B 141 AWARDGSKLYGL-GRDLHVMDPEAGTL-VEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYR 218 (337)
T ss_dssp EECTTSSCEEEE-SSSEEEEETTTTEE-EEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEE
T ss_pred EECCCCCEEEEe-CCeEEEEECCCCcE-eeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccc
Confidence 999999988866 78999999876321 100000
Q ss_pred -----eec--------cccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEE
Q 022019 214 -----LKG--------NKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYL 280 (304)
Q Consensus 214 -----~~~--------~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 280 (304)
+.. ....+...+.+++|+| ++.+++++ ++.|++||+.+++.+..+.. ...+.+++|+|+|++|
T Consensus 219 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l 294 (337)
T 1pby_B 219 TGLLTMDLETGEMAMREVRIMDVFYFSTAVNP-AKTRAFGA--YNVLESFDLEKNASIKRVPL-PHSYYSVNVSTDGSTV 294 (337)
T ss_dssp EEEEEEETTTCCEEEEEEEECSSCEEEEEECT-TSSEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEECTTSCEE
T ss_pred cceEEEeCCCCCceEeecCCCCCceeeEEECC-CCCEEEEe--CCeEEEEECCCCcCcceecC-CCceeeEEECCCCCEE
Confidence 000 0001112355799999 66667766 69999999999988887764 3467899999999999
Q ss_pred EEeeccCCeEEEEecccceee
Q 022019 281 YTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 281 ~~~~~~d~~i~vwd~~~~~~~ 301 (304)
++++ .++.|.+||+.+++.+
T Consensus 295 ~~~~-~~~~i~v~d~~~~~~~ 314 (337)
T 1pby_B 295 WLGG-ALGDLAAYDAETLEKK 314 (337)
T ss_dssp EEES-BSSEEEEEETTTCCEE
T ss_pred EEEc-CCCcEEEEECcCCcEE
Confidence 9998 8999999999988654
No 136
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.89 E-value=4e-21 Score=163.92 Aligned_cols=202 Identities=12% Similarity=0.026 Sum_probs=150.4
Q ss_pred EEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeC
Q 022019 67 KWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTR 146 (304)
Q Consensus 67 ~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~ 146 (304)
.|+|++.++++++.|++|.+||..+++.... +..+..+..++ ++|+|++|++++.
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~------------------i~~g~~~~~v~-------~spdg~~l~v~~~ 198 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKV------------------IDTGYAVHISR-------MSASGRYLLVIGR 198 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEE------------------EECSTTEEEEE-------ECTTSCEEEEEET
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEE------------------EecCcccceEE-------ECCCCCEEEEECC
Confidence 3889999999999999999999986644211 11112244444 4899999999999
Q ss_pred CCCEEEEEc--CCCeeeEEeecccccccccceEEEEECC----CCcEEEEE--cCCeEEEEEcCCCCccceeeeeeeccc
Q 022019 147 DHPIHLWDA--TTGLLRCTYRAYDAVDEITAAFSVAFNP----TGTKIFAG--YNKSVRVFDVHRPGRDFEKYSTLKGNK 218 (304)
Q Consensus 147 dg~i~i~d~--~~~~~~~~~~~~~~~~~~~~v~~i~~~~----~~~~l~~~--~d~~i~v~d~~~~~~~~~~~~~~~~~~ 218 (304)
|+.|.+||+ .+++.+..+.... .+..++|+| +|++++++ .+++|.+||..+. .....+.......
T Consensus 199 d~~V~v~D~~~~t~~~~~~i~~g~------~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~-~~~~~i~~~g~~~ 271 (543)
T 1nir_A 199 DARIDMIDLWAKEPTKVAEIKIGI------EARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETL-EPKQIVSTRGMTV 271 (543)
T ss_dssp TSEEEEEETTSSSCEEEEEEECCS------EEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTC-CEEEEEECCEECS
T ss_pred CCeEEEEECcCCCCcEEEEEecCC------CcceEEeCCCcCCCCCEEEEEEccCCeEEEEecccc-ccceeecccCccc
Confidence 999999999 7888777776432 678999999 99999955 5899999998763 2222211100000
Q ss_pred c---cc-ccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeE--EeccccCCeEEEEECCCCcEEEEeeccCCeEEE
Q 022019 219 E---GQ-AGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLY--VLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILC 292 (304)
Q Consensus 219 ~---~~-~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~v 292 (304)
. -| ...+.++.++|+++.++++...++.|.+||..+.+.+. .+. +...+.++.|+|+|++|++++..+++|.+
T Consensus 272 ~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l~va~~~~~~v~v 350 (543)
T 1nir_A 272 DTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRYFMTAANNSNKVAV 350 (543)
T ss_dssp SSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCEEEEEEGGGTEEEE
T ss_pred CccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec-cCcCccCceECCCCCEEEEEecCCCeEEE
Confidence 0 02 23688999999778888888899999999998765433 443 56678899999999988877647899999
Q ss_pred Eecccceee
Q 022019 293 WDLRKAVQV 301 (304)
Q Consensus 293 wd~~~~~~~ 301 (304)
||+.+++.+
T Consensus 351 ~D~~tg~l~ 359 (543)
T 1nir_A 351 IDSKDRRLS 359 (543)
T ss_dssp EETTTTEEE
T ss_pred EECCCCeEE
Confidence 999998754
No 137
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.89 E-value=8.8e-22 Score=163.68 Aligned_cols=217 Identities=12% Similarity=0.099 Sum_probs=139.7
Q ss_pred CCCCceeEEEEcCCCCeEE----EecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccce
Q 022019 58 IPNNFLKGIKWSPDGSSFL----TSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSA 133 (304)
Q Consensus 58 ~h~~~V~~i~~s~~~~~l~----s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 133 (304)
.|.+.|++++|+|+|++|+ +|+.|+.|+|||+.+........ ............|...|.+++|
T Consensus 90 ~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~------~~~~~~~~~~~~h~~~V~~v~~------ 157 (434)
T 2oit_A 90 PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQ------KRPFAYHKLLKDAGGMVIDMKW------ 157 (434)
T ss_dssp CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSS------CCCSEEEECCCSGGGSEEEEEE------
T ss_pred cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCC------cceeeeeeccCCCCCceEEEEE------
Confidence 4567899999999999999 88999999999986431000000 0000001122346788999999
Q ss_pred eCCC-ccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceee
Q 022019 134 SDPT-SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKY 211 (304)
Q Consensus 134 ~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~ 211 (304)
+|+ +.+|++++.||+|++||++++........+. ..|.+++|+|+|++|++| .||.|++||++. .....+
T Consensus 158 -~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~-----~~v~~v~wspdg~~lasgs~dg~v~iwd~~~--~~~~~~ 229 (434)
T 2oit_A 158 -NPTVPSMVAVCLADGSIAVLQVTETVKVCATLPST-----VAVTSVCWSPKGKQLAVGKQNGTVVQYLPTL--QEKKVI 229 (434)
T ss_dssp -CSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGG-----GCEEEEEECTTSSCEEEEETTSCEEEECTTC--CEEEEE
T ss_pred -CCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCC-----CceeEEEEcCCCCEEEEEcCCCcEEEEccCC--cccccc
Confidence 445 7899999999999999999886554444333 389999999999999966 999999999972 111111
Q ss_pred eeeeccccccccceeEEEeecCCCcEEEE-EecCC------eEEEEecCCce-----EeEEec-------cccCCeEEEE
Q 022019 212 STLKGNKEGQAGIMSAIAFSPTHTGMLAI-GSYSQ------TSAIYREDNME-----LLYVLH-------GQEGGVTHVQ 272 (304)
Q Consensus 212 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~~-~~~dg------~i~i~d~~~~~-----~~~~~~-------~~~~~v~~~~ 272 (304)
.........|...+.+++|++ +..++++ ++.+| .+++|+++... ....+. +...+-..+.
T Consensus 230 ~~~~~~~~~~~~~v~~v~w~~-~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 308 (434)
T 2oit_A 230 PCPPFYESDHPVRVLDVLWIG-TYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLS 308 (434)
T ss_dssp CCCTTCCTTSCEEEEEEEEEE-TTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEE
T ss_pred cCCcccCCCCceeEEEEEEec-CceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeee
Confidence 111001112345799999999 5555543 44443 38999997542 111211 1222333444
Q ss_pred ECCCCcEEEEeeccCCeEEEEec
Q 022019 273 FSRDGNYLYTGGRKDPYILCWDL 295 (304)
Q Consensus 273 ~~~~~~~l~~~~~~d~~i~vwd~ 295 (304)
+-++.+++++++...+.|.|...
T Consensus 309 ~l~dw~l~~v~s~~s~dv~vl~~ 331 (434)
T 2oit_A 309 YIEEWDLVLAASAASTEVSILAR 331 (434)
T ss_dssp EEGGGTEEEEEETTCSBCEEEEE
T ss_pred hhccCCEEEEecCCCCceeEEEe
Confidence 44677777777656666766664
No 138
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.89 E-value=2.1e-20 Score=151.49 Aligned_cols=215 Identities=11% Similarity=0.091 Sum_probs=148.4
Q ss_pred CceeEEEEcCCCCeEE-EecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCcc
Q 022019 61 NFLKGIKWSPDGSSFL-TSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSC 139 (304)
Q Consensus 61 ~~V~~i~~s~~~~~l~-s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 139 (304)
..+.+++|+|+|++++ +...++.|.+||..+++.............. .........+.| +|+++
T Consensus 89 ~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~-------s~dg~ 153 (353)
T 3vgz_A 89 LKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTE--------EVRPLQPRELVA-------DDATN 153 (353)
T ss_dssp SCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCS--------SCCCCEEEEEEE-------ETTTT
T ss_pred CCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCcccc--------ccCCCCCceEEE-------CCCCC
Confidence 4478899999999554 5566899999999876543222111000000 000011344444 78888
Q ss_pred EEEEEe--CCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeec
Q 022019 140 VFASTT--RDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKG 216 (304)
Q Consensus 140 ~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~ 216 (304)
.+++++ .++.|.+||+.+++....+..... .+.+++|+|+++.++++ .++.|.+||+.+.. .......
T Consensus 154 ~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~----~~~~~~~ 224 (353)
T 3vgz_A 154 TVYISGIGKESVIWVVDGGNIKLKTAIQNTGK-----MSTGLALDSEGKRLYTTNADGELITIDTADNK----ILSRKKL 224 (353)
T ss_dssp EEEEEEESSSCEEEEEETTTTEEEEEECCCCT-----TCCCCEEETTTTEEEEECTTSEEEEEETTTTE----EEEEEEC
T ss_pred EEEEEecCCCceEEEEcCCCCceEEEecCCCC-----ccceEEECCCCCEEEEEcCCCeEEEEECCCCe----EEEEEEc
Confidence 777765 478899999999988877763332 56789999999998865 89999999997641 1222222
Q ss_pred cccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEecc
Q 022019 217 NKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 217 ~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~ 296 (304)
...++...+..++|+|++..++++...++.|.+||+.+++.+..+..... ..++|+|+|+++++++..++.|.+||+.
T Consensus 225 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~~~~~s~dg~~l~v~~~~~~~v~~~d~~ 302 (353)
T 3vgz_A 225 LDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPES--LAVLFNPARNEAYVTHRQAGKVSVIDAK 302 (353)
T ss_dssp CCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSC--CCEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC--ceEEECCCCCEEEEEECCCCeEEEEECC
Confidence 12234556788999995554555555569999999999998888775432 5799999999777666478999999999
Q ss_pred cceee
Q 022019 297 KAVQV 301 (304)
Q Consensus 297 ~~~~~ 301 (304)
+++.+
T Consensus 303 ~~~~~ 307 (353)
T 3vgz_A 303 SYKVV 307 (353)
T ss_dssp TTEEE
T ss_pred CCeEE
Confidence 88654
No 139
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.88 E-value=2.6e-20 Score=150.89 Aligned_cols=209 Identities=9% Similarity=0.064 Sum_probs=151.0
Q ss_pred CCCceeEEEEcCCCCeEEEecC-------CCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcc
Q 022019 59 PNNFLKGIKWSPDGSSFLTSSE-------DKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHM 131 (304)
Q Consensus 59 h~~~V~~i~~s~~~~~l~s~~~-------dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 131 (304)
....+..++|+|+|+++++++. ++.|.+||..+++..... ..... |..
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~------------------~~~~~-------~~~ 93 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAI------------------HNDLK-------PFG 93 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEE------------------EESSC-------CCS
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEE------------------ecCCC-------cce
Confidence 3456889999999998887764 568999999865432111 11122 334
Q ss_pred ceeCCCccEEE-EEeCCCCEEEEEcCCCeeeEEeecccccc----cccceEEEEECCCCcEEEEE---cCCeEEEEEcCC
Q 022019 132 SASDPTSCVFA-STTRDHPIHLWDATTGLLRCTYRAYDAVD----EITAAFSVAFNPTGTKIFAG---YNKSVRVFDVHR 203 (304)
Q Consensus 132 ~~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~~----~~~~v~~i~~~~~~~~l~~~---~d~~i~v~d~~~ 203 (304)
++++|+++.++ +...++.|.+||+.+++....+....... ....+.++.|+|+++.++++ .++.|.+||+.+
T Consensus 94 ~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~ 173 (353)
T 3vgz_A 94 ATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGN 173 (353)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTT
T ss_pred EEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCC
Confidence 45588888554 45567999999999998877776543211 01136789999999988743 378899999976
Q ss_pred CCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEecc----ccCCeEEEEECCCCcE
Q 022019 204 PGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHG----QEGGVTHVQFSRDGNY 279 (304)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----~~~~v~~~~~~~~~~~ 279 (304)
.. ....+ ..+...+.+++|+| ++..+++++.++.|.+||+.+++.+..+.. +...+..++|+|+|++
T Consensus 174 ~~----~~~~~----~~~~~~~~~~~~s~-dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 244 (353)
T 3vgz_A 174 IK----LKTAI----QNTGKMSTGLALDS-EGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQR 244 (353)
T ss_dssp TE----EEEEE----CCCCTTCCCCEEET-TTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTE
T ss_pred Cc----eEEEe----cCCCCccceEEECC-CCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCE
Confidence 31 11211 22233477899999 667888888899999999999998877764 4556889999999998
Q ss_pred EEEeeccCCeEEEEecccceee
Q 022019 280 LYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 280 l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
|++++..++.|.+||+.+++.+
T Consensus 245 l~~~~~~~~~v~~~d~~~~~~~ 266 (353)
T 3vgz_A 245 AFITDSKAAEVLVVDTRNGNIL 266 (353)
T ss_dssp EEEEESSSSEEEEEETTTCCEE
T ss_pred EEEEeCCCCEEEEEECCCCcEE
Confidence 8887745699999999888654
No 140
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.88 E-value=3.4e-20 Score=149.57 Aligned_cols=206 Identities=10% Similarity=0.163 Sum_probs=136.8
Q ss_pred CCCCceeEEEEcCCCCeEEEecCC-CeEEEeeCC--CCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 58 IPNNFLKGIKWSPDGSSFLTSSED-KTLRIFSLP--ENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 58 ~h~~~V~~i~~s~~~~~l~s~~~d-g~v~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
.|...+.+++|+|+|++|++++.+ +.|.+|++. ++... ..........+..+ ++
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~-------~~ 91 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALT----------------FAAESALPGSLTHI-------ST 91 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE----------------EEEEEECSSCCSEE-------EE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCcee----------------eccccccCCCCcEE-------EE
Confidence 467789999999999988888876 999999987 22110 00111111233344 45
Q ss_pred CCCccEEEEEeC-CCCEEEEEcCCCe---eeEEeecccccccccceEEEEECCCCcEEE-EE-cCCeEEEEEcCCCCccc
Q 022019 135 DPTSCVFASTTR-DHPIHLWDATTGL---LRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGRDF 208 (304)
Q Consensus 135 ~~~~~~l~~~~~-dg~i~i~d~~~~~---~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~v~d~~~~~~~~ 208 (304)
+|+++++++++. ++.|.+||+..+. ....+... ..+.+++|+|++++++ ++ .++.|++||+...+..
T Consensus 92 s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~------~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~- 164 (343)
T 1ri6_A 92 DHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL------DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHL- 164 (343)
T ss_dssp CTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC------TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCE-
T ss_pred cCCCCEEEEEecCCCeEEEEECCCCccccccccccCC------CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCce-
Confidence 889998776664 8889999995333 33333222 1578899999999888 45 8999999999762221
Q ss_pred eeee--eeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCC--ceE--eEEec----cc--cCCeEEEEECCC
Q 022019 209 EKYS--TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN--MEL--LYVLH----GQ--EGGVTHVQFSRD 276 (304)
Q Consensus 209 ~~~~--~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~--~~~--~~~~~----~~--~~~v~~~~~~~~ 276 (304)
.... ... ......+..++|+|++..+++++..++.|.+||+.. ++. ...+. ++ ...+..++|+|+
T Consensus 165 ~~~~~~~~~---~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~d 241 (343)
T 1ri6_A 165 VAQDPAEVT---TVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPD 241 (343)
T ss_dssp EEEEEEEEE---CSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTT
T ss_pred eeecccccc---cCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCC
Confidence 1111 111 112345788999995444555555889999999953 322 22222 11 235778999999
Q ss_pred CcEEEEeeccCCeEEEEecc
Q 022019 277 GNYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 277 ~~~l~~~~~~d~~i~vwd~~ 296 (304)
|++|++++..++.|.+|++.
T Consensus 242 g~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 242 GRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp SSEEEEEETTTTEEEEEEEC
T ss_pred CCEEEEEecCCCEEEEEEEc
Confidence 99888555479999999998
No 141
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.88 E-value=3.2e-20 Score=149.19 Aligned_cols=227 Identities=10% Similarity=0.160 Sum_probs=145.3
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCC---eEEEeeCCCCCCccccccccccccCCccc
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDK---TLRIFSLPENGISYDVNACSLAKDQDSYE 111 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg---~v~vwd~~~~~~~~~~~~~~~~~~~~~~~ 111 (304)
.+..|+....... ...+..+..+..+++|+|+|++|+++..++ .|.+||+.+++...
T Consensus 63 ~i~~~d~~~~~~~-----~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~--------------- 122 (331)
T 3u4y_A 63 TLVQIETQLEPPK-----VVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFIS--------------- 122 (331)
T ss_dssp EEEEEECSSSSCE-----EEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEE---------------
T ss_pred eEEEEECCCCcee-----EEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEE---------------
Confidence 3455565544331 224555666666699999999999655553 89999998654321
Q ss_pred eEEEeecCCeEEEEeecCccceeCCCccEEE-EEeCCCC-EEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE
Q 022019 112 ASLVVTEGESVYDFCWFPHMSASDPTSCVFA-STTRDHP-IHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF 189 (304)
Q Consensus 112 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~-~~~~dg~-i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~ 189 (304)
..........++| +|+|++++ +...++. |.+|++.......... .........+..++|+|+|++++
T Consensus 123 ---~~~~~~~~~~~~~-------spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~spdg~~l~ 191 (331)
T 3u4y_A 123 ---TIPIPYDAVGIAI-------SPNGNGLILIDRSSANTVRRFKIDADGVLFDTG-QEFISGGTRPFNITFTPDGNFAF 191 (331)
T ss_dssp ---EEECCTTEEEEEE-------CTTSSCEEEEEETTTTEEEEEEECTTCCEEEEE-EEEECSSSSEEEEEECTTSSEEE
T ss_pred ---EEECCCCccceEE-------CCCCCEEEEEecCCCceEEEEEECCCCcEeecC-CccccCCCCccceEECCCCCEEE
Confidence 1122233455555 88997554 4456688 9999998543322111 11001122578999999999776
Q ss_pred -EE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEE-EEEecCCeEEEEecCCceE--eEEeccc
Q 022019 190 -AG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGML-AIGSYSQTSAIYREDNMEL--LYVLHGQ 264 (304)
Q Consensus 190 -~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l-~~~~~dg~i~i~d~~~~~~--~~~~~~~ 264 (304)
++ .++.|++||+..... ......+. ....+..++|+| +++++ ++...++.|.+||+.+++. +..+..+
T Consensus 192 v~~~~~~~v~v~d~~~~~~-~~~~~~~~-----~~~~~~~~~~sp-dg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~ 264 (331)
T 3u4y_A 192 VANLIGNSIGILETQNPEN-ITLLNAVG-----TNNLPGTIVVSR-DGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHG 264 (331)
T ss_dssp EEETTTTEEEEEECSSTTS-CEEEEEEE-----CSSCCCCEEECT-TSSEEEEECSSEEEEEEEETTTTEEEEEEEEECC
T ss_pred EEeCCCCeEEEEECCCCcc-cceeeecc-----CCCCCceEEECC-CCCEEEEEEcCCCEEEEEECCCCceeeecccccc
Confidence 55 789999999976422 11122221 124567899999 55544 4445578899999998876 4443322
Q ss_pred ----cC---CeEEEEECCCCcEEEEeeccCCeEEEEecccce
Q 022019 265 ----EG---GVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAV 299 (304)
Q Consensus 265 ----~~---~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~ 299 (304)
.. ....++|+|+|++|++++..++.|.+||+....
T Consensus 265 ~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 265 LLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKV 306 (331)
T ss_dssp CCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred cccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCc
Confidence 22 235689999999987776467799999998754
No 142
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.88 E-value=6.1e-21 Score=169.59 Aligned_cols=218 Identities=14% Similarity=0.120 Sum_probs=146.1
Q ss_pred CCceeEEEEcCCCCeEEEecC-CC-----eEEEeeCCCCCCccccccccccccCC-------ccceEEEeecCCeEEEEe
Q 022019 60 NNFLKGIKWSPDGSSFLTSSE-DK-----TLRIFSLPENGISYDVNACSLAKDQD-------SYEASLVVTEGESVYDFC 126 (304)
Q Consensus 60 ~~~V~~i~~s~~~~~l~s~~~-dg-----~v~vwd~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~v~~~~ 126 (304)
...|.+++|+|||++|++++. |+ .|++||+.+++............+.. .............+..
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-- 113 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVD-- 113 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCC--
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcce--
Confidence 456999999999999999998 88 89999998775432221111000000 0000000000011333
Q ss_pred ecCccceeCCCccEEEEEeCCCCEEEEEcCCC---eeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCC
Q 022019 127 WFPHMSASDPTSCVFASTTRDHPIHLWDATTG---LLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHR 203 (304)
Q Consensus 127 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~ 203 (304)
.+|+|||++|++++. +.|++||+.++ ... .+..+. ..+..++|+|||++|+.+.++.|++||+..
T Consensus 114 -----~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~-~l~~~~-----~~~~~~~~SPDG~~la~~~~~~i~~~d~~~ 181 (741)
T 2ecf_A 114 -----YQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVR-QLTHGE-----GFATDAKLSPKGGFVSFIRGRNLWVIDLAS 181 (741)
T ss_dssp -----CEECTTSSEEEEEET-TEEEEEESSSCSTTSCC-BCCCSS-----SCEEEEEECTTSSEEEEEETTEEEEEETTT
T ss_pred -----eEECCCCCEEEEEeC-CcEEEEECCCCCcceEE-EcccCC-----cccccccCCCCCCEEEEEeCCcEEEEecCC
Confidence 455999999999986 89999999887 433 333332 278899999999999977778999999976
Q ss_pred CCccceeeeeeecccccccc----------------ceeEEEeecCCCcEEEEEecCC----------------------
Q 022019 204 PGRDFEKYSTLKGNKEGQAG----------------IMSAIAFSPTHTGMLAIGSYSQ---------------------- 245 (304)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~----------------~v~~~~~~p~~~~~l~~~~~dg---------------------- 245 (304)
+. . ..+. ..+.. .+.+++|+| +++.|++++.|+
T Consensus 182 g~-~----~~~~---~~~~~~~~~g~~~~v~~~~~~~~~~~~~Sp-Dg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~ 252 (741)
T 2ecf_A 182 GR-Q----MQLT---ADGSTTIGNGIAEFVADEEMDRHTGYWWAP-DDSAIAYARIDESPVPVQKRYEVYADRTDVIEQR 252 (741)
T ss_dssp TE-E----EECC---CCCCSSEEESCCCHHHHHHSCCCCSEEECT-TSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEE
T ss_pred CC-E----EEec---cCCccceeccccceeeeeccccccceEECC-CCCEEEEEEEcCCCCceEecCCCCCCcccceEee
Confidence 31 1 1111 11111 147899999 666777776665
Q ss_pred -----------eEEEEecCC-ceEeEEec--cccCCeEEEEECCCCcEEEEeec----cCCeEEEEecccceee
Q 022019 246 -----------TSAIYREDN-MELLYVLH--GQEGGVTHVQFSRDGNYLYTGGR----KDPYILCWDLRKAVQV 301 (304)
Q Consensus 246 -----------~i~i~d~~~-~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~----~d~~i~vwd~~~~~~~ 301 (304)
.|++||+.+ ++...... .|...+.+++| |||++|++++. .+..|++||+.+++..
T Consensus 253 ~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~ 325 (741)
T 2ecf_A 253 YPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQR 325 (741)
T ss_dssp CCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEE
T ss_pred cCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceE
Confidence 789999988 76554332 46778999999 99999997761 2578999999887643
No 143
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.86 E-value=2.8e-19 Score=144.68 Aligned_cols=212 Identities=16% Similarity=0.199 Sum_probs=134.5
Q ss_pred CCCCceeEEEEcCCCCeEEEecC---CCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 58 IPNNFLKGIKWSPDGSSFLTSSE---DKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 58 ~h~~~V~~i~~s~~~~~l~s~~~---dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
.+...+..++|+|+|+ |++++. ++.|.+|++.++... .......+.. .|..+++
T Consensus 37 ~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~---------------~~~~~~~~~~-------~p~~~a~ 93 (347)
T 3hfq_A 37 AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAH---------------KLNTVVAPGT-------PPAYVAV 93 (347)
T ss_dssp EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEE---------------EEEEEEEESC-------CCSEEEE
T ss_pred eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEE---------------EeeeeecCCC-------CCEEEEE
Confidence 3456688899999999 555543 689999998643210 0001111222 3444556
Q ss_pred CCCccEEEEEe-CCCCEEEEEcC-CCeee--EEeeccccc----ccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCC
Q 022019 135 DPTSCVFASTT-RDHPIHLWDAT-TGLLR--CTYRAYDAV----DEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPG 205 (304)
Q Consensus 135 ~~~~~~l~~~~-~dg~i~i~d~~-~~~~~--~~~~~~~~~----~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~ 205 (304)
+|+|++|++++ .++.|.+|++. ++... ..+...... .....+.+++|+|+|++++++ .++.|++||+...+
T Consensus 94 spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g 173 (347)
T 3hfq_A 94 DEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAG 173 (347)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTS
T ss_pred CCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCC
Confidence 88999888887 67899999996 33322 222211100 011247889999999954455 78899999998422
Q ss_pred ccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCC--ceE--eEEecccc------CCeEEEEECC
Q 022019 206 RDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN--MEL--LYVLHGQE------GGVTHVQFSR 275 (304)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~--~~~--~~~~~~~~------~~v~~~~~~~ 275 (304)
. ........ ......+..++|+|++..+++++..++.|.+|++.. ++. +..+.... ..+..++|+|
T Consensus 174 ~-~~~~~~~~---~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~sp 249 (347)
T 3hfq_A 174 Q-LSEQSVLT---MEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSH 249 (347)
T ss_dssp C-EEEEEEEE---CCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECT
T ss_pred c-EEEeeeEE---cCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECC
Confidence 2 11111111 112234678999995444555567789999999874 442 33333222 3588999999
Q ss_pred CCcEEEEeeccCCeEEEEecc
Q 022019 276 DGNYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 276 ~~~~l~~~~~~d~~i~vwd~~ 296 (304)
||++|++++..++.|.+|++.
T Consensus 250 dG~~l~v~~~~~~~v~v~~~~ 270 (347)
T 3hfq_A 250 DGHFLYVSNRGYNTLAVFAVT 270 (347)
T ss_dssp TSCEEEEEEETTTEEEEEEEC
T ss_pred CCCEEEEEeCCCCEEEEEEEC
Confidence 999886655368999999996
No 144
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.86 E-value=5.1e-21 Score=169.63 Aligned_cols=209 Identities=12% Similarity=0.038 Sum_probs=142.6
Q ss_pred ceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCC---eEEEEeecCccceeCCCc
Q 022019 62 FLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGE---SVYDFCWFPHMSASDPTS 138 (304)
Q Consensus 62 ~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~~~~ 138 (304)
.+.+++|+|||+++++ +.||+|++||+.+++..... ..+.. .+..++| ||||
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~-----------------~~~~~~~~~v~~~~~-------SpDg 72 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLI-----------------EGKKIESLRAIRYEI-------SPDR 72 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEE-----------------CTTTTTTTTCSEEEE-------CTTS
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEe-----------------ccccccccccceEEE-------CCCC
Confidence 4678999999998776 78999999999866432111 11111 2445544 8999
Q ss_pred cEEEEEeCC---------CCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccce
Q 022019 139 CVFASTTRD---------HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFE 209 (304)
Q Consensus 139 ~~l~~~~~d---------g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~ 209 (304)
++|++++.+ +.+++||+.+++. ..+.... .+...+..++|+|||+.|+.+.++.|++||+..+.. ..
T Consensus 73 ~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~--~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~g~~-~~ 148 (723)
T 1xfd_A 73 EYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPE--VSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQA-IR 148 (723)
T ss_dssp SEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTT--CCSCCCSBCCBCSSTTCEEEEETTEEEEESSSSSCC-EE
T ss_pred CEEEEEecCccceeecceeeEEEEECCCCce-EeccCCc--cccccccccEECCCCCEEEEEECCeEEEEECCCCce-EE
Confidence 999999874 6788999998875 2333221 222247889999999999977678999999976321 11
Q ss_pred eeeeeecc--cccc---------ccceeEEEeecCCCcEEEEEecCC---------------------------------
Q 022019 210 KYSTLKGN--KEGQ---------AGIMSAIAFSPTHTGMLAIGSYSQ--------------------------------- 245 (304)
Q Consensus 210 ~~~~~~~~--~~~~---------~~~v~~~~~~p~~~~~l~~~~~dg--------------------------------- 245 (304)
........ ..++ ...+.+++|+| +++.|++++.|+
T Consensus 149 ~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~Sp-Dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 227 (723)
T 1xfd_A 149 VVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSP-DGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPS 227 (723)
T ss_dssp EECCCBTTTEEEEECCHHHHHTTSSSSEEEEECT-TSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCE
T ss_pred EecCCCCCceECcccceeEEEEeccCcceEEECC-CCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCe
Confidence 10000000 0000 01237899999 666777776543
Q ss_pred -eEEEEecCCceEeEEeccc------cCCeEEEEECCCCcEEEEeec---cCCeEEEEeccccee
Q 022019 246 -TSAIYREDNMELLYVLHGQ------EGGVTHVQFSRDGNYLYTGGR---KDPYILCWDLRKAVQ 300 (304)
Q Consensus 246 -~i~i~d~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~---~d~~i~vwd~~~~~~ 300 (304)
.|++||+.+++....+..+ ...+.+++|+|||++|++... .+..|++||+.+++.
T Consensus 228 ~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~ 292 (723)
T 1xfd_A 228 ISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVC 292 (723)
T ss_dssp EEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCE
T ss_pred eEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcc
Confidence 7999999888765666644 567899999999999877651 235799999988764
No 145
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.86 E-value=1.2e-19 Score=143.09 Aligned_cols=204 Identities=19% Similarity=0.235 Sum_probs=138.7
Q ss_pred ceeeecCCC-cccccccceeeeecCC-CCceeEEEEcCCCCeEEEec--CCCeEEEeeCC--CCCCccccccccccccCC
Q 022019 35 PLIRFDVPP-HRTYHFYNQFRTSSIP-NNFLKGIKWSPDGSSFLTSS--EDKTLRIFSLP--ENGISYDVNACSLAKDQD 108 (304)
Q Consensus 35 ~~~~~~~~~-~~~~~~~~~~~~~~~h-~~~V~~i~~s~~~~~l~s~~--~dg~v~vwd~~--~~~~~~~~~~~~~~~~~~ 108 (304)
.+..|++.. ..... ...+| ...|.+++|+|+|++|++++ .++...||.++ ++..
T Consensus 63 ~i~~~d~~~~~~~~~------~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~-------------- 122 (297)
T 2ojh_A 63 LLYRLSLAGDPSPEK------VDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTP-------------- 122 (297)
T ss_dssp EEEEEESSSCCSCEE------CCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCC--------------
T ss_pred eEEEEeCCCCCCceE------eccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCce--------------
Confidence 345566555 33222 33344 47899999999999999988 34556666553 2211
Q ss_pred ccceEEEeecCCeEEEEeecCccceeCCCccEEE-EEeCCCCEEEEEcC--CCeeeEEeecccccccccceEEEEECCCC
Q 022019 109 SYEASLVVTEGESVYDFCWFPHMSASDPTSCVFA-STTRDHPIHLWDAT--TGLLRCTYRAYDAVDEITAAFSVAFNPTG 185 (304)
Q Consensus 109 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~-~~~~dg~i~i~d~~--~~~~~~~~~~~~~~~~~~~v~~i~~~~~~ 185 (304)
........+..++| +|+++.|+ +++.++.+.+|++. ++.. ..+..+. ..+.++.|+|++
T Consensus 123 -----~~~~~~~~~~~~~~-------spdg~~l~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~-----~~~~~~~~s~dg 184 (297)
T 2ojh_A 123 -----RLMTKNLPSYWHGW-------SPDGKSFTYCGIRDQVFDIYSMDIDSGVE-TRLTHGE-----GRNDGPDYSPDG 184 (297)
T ss_dssp -----EECCSSSSEEEEEE-------CTTSSEEEEEEEETTEEEEEEEETTTCCE-EECCCSS-----SCEEEEEECTTS
T ss_pred -----EEeecCCCccceEE-------CCCCCEEEEEECCCCceEEEEEECCCCcc-eEcccCC-----CccccceECCCC
Confidence 11112233566666 78898777 77789989999864 3333 3333222 278899999999
Q ss_pred cEEE-EE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecC-----------CeEEEEec
Q 022019 186 TKIF-AG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS-----------QTSAIYRE 252 (304)
Q Consensus 186 ~~l~-~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d-----------g~i~i~d~ 252 (304)
+.++ ++ .++.+++|++........ .+ ..+...+..++|+| ++.+|++++.+ +.|++||+
T Consensus 185 ~~l~~~~~~~~~~~i~~~~~~~~~~~---~~----~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~ 256 (297)
T 2ojh_A 185 RWIYFNSSRTGQMQIWRVRVDGSSVE---RI----TDSAYGDWFPHPSP-SGDKVVFVSYDADVFDHPRDLDVRVQLMDM 256 (297)
T ss_dssp SEEEEEECTTSSCEEEEEETTSSCEE---EC----CCCSEEEEEEEECT-TSSEEEEEEEETTCCSCCSSEEEEEEEEET
T ss_pred CEEEEEecCCCCccEEEECCCCCCcE---EE----ecCCcccCCeEECC-CCCEEEEEEcCCCCCcccccCceEEEEEec
Confidence 9888 45 589999999874332221 11 34456788999999 66677776655 56999999
Q ss_pred CCceE--eEEeccccCCeEEEEECCCCcEEEEee
Q 022019 253 DNMEL--LYVLHGQEGGVTHVQFSRDGNYLYTGG 284 (304)
Q Consensus 253 ~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~ 284 (304)
.+++. +..+.+|...+.+++|+|+|++|++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 290 (297)
T 2ojh_A 257 DGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVR 290 (297)
T ss_dssp TSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEE
T ss_pred CCCCceeeeccCCCCcccccceECCCCCEEEEEE
Confidence 88754 445557888899999999999999888
No 146
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.85 E-value=4.7e-19 Score=143.26 Aligned_cols=232 Identities=13% Similarity=0.113 Sum_probs=147.3
Q ss_pred ceeeecCCCcccccccceeeeecCCC-CceeEEEEcCCCCeE-EEecCCCeEEEeeCCCCCCccccccccccccCCccce
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPN-NFLKGIKWSPDGSSF-LTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEA 112 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~-~~V~~i~~s~~~~~l-~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 112 (304)
.+..|+........ .+..+. ..+..++|+|+|+++ +++..++.|.+||+.+++......
T Consensus 22 ~v~~~d~~~~~~~~------~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~------------- 82 (349)
T 1jmx_B 22 NLHVVDVASDTVYK------SCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHAN------------- 82 (349)
T ss_dssp EEEEEETTTTEEEE------EEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-------------
T ss_pred eEEEEECCCCcEEE------EEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEE-------------
Confidence 35566766554332 232222 257899999999865 455678999999998654321111
Q ss_pred EEEeecCCeEEEEeecCccceeCCCccEEEEEeCC------------CCEEEEEcCCCeeeEEeecccccccccceEEEE
Q 022019 113 SLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRD------------HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVA 180 (304)
Q Consensus 113 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~d------------g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~ 180 (304)
..+.... ....|..++++|+|+++++++.+ +.|.+||+.+++......... ....+.+++
T Consensus 83 ---~~~~~~~--~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~---~~~~~~~~~ 154 (349)
T 1jmx_B 83 ---LSSVPGE--VGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP---MPRQVYLMR 154 (349)
T ss_dssp ---SCCSTTE--EEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE---CCSSCCCEE
T ss_pred ---ccccccc--ccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc---CCCccccee
Confidence 0000000 01124445669999999998865 899999998754332221111 112577899
Q ss_pred ECCCCcEEEEEcCCeEEEEEcCCCCccceeeeeee-------------------------------cc------------
Q 022019 181 FNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLK-------------------------------GN------------ 217 (304)
Q Consensus 181 ~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~~~~-------------------------------~~------------ 217 (304)
|+|+++ ++++ ++.|++||+.+... ...+.... ..
T Consensus 155 ~s~dg~-l~~~-~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 231 (349)
T 1jmx_B 155 AADDGS-LYVA-GPDIYKMDVKTGKY-TVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADL 231 (349)
T ss_dssp ECTTSC-EEEE-SSSEEEECTTTCCE-EEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEE
T ss_pred ECCCCc-EEEc-cCcEEEEeCCCCce-eccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCcccccc
Confidence 999999 5544 33499999876421 11100000 00
Q ss_pred ------------------ccccccceeEEEeec-CCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCc
Q 022019 218 ------------------KEGQAGIMSAIAFSP-THTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGN 278 (304)
Q Consensus 218 ------------------~~~~~~~v~~~~~~p-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~ 278 (304)
...+...+.+++|+| ++. +++++ ++.|.+||+.+++.+..+.. ...+.+++|+|+|+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~-~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~ 307 (349)
T 1jmx_B 232 LYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPN-QIYGV--LNRLAKYDLKQRKLIKAANL-DHTYYCVAFDKKGD 307 (349)
T ss_dssp EEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTT-EEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEECSSSS
T ss_pred ceeEEEEeccCCcEEecccccCCCcceeeEecCCCCC-EEEEE--cCeEEEEECccCeEEEEEcC-CCCccceEECCCCC
Confidence 000111355677888 655 55555 78999999999998887763 34578999999999
Q ss_pred EEEEeeccCCeEEEEecccceee
Q 022019 279 YLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 279 ~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
+|++++ .++.|.+||+++++.+
T Consensus 308 ~l~~~~-~~~~v~v~d~~~~~~~ 329 (349)
T 1jmx_B 308 KLYLGG-TFNDLAVFNPDTLEKV 329 (349)
T ss_dssp CEEEES-BSSEEEEEETTTTEEE
T ss_pred EEEEec-CCCeEEEEecccccee
Confidence 999887 8999999999988754
No 147
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.85 E-value=6.5e-20 Score=163.00 Aligned_cols=199 Identities=11% Similarity=0.130 Sum_probs=140.3
Q ss_pred ceeEEEEcCCCCeEEEecCCCeEEEeeCCCC---CCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCc
Q 022019 62 FLKGIKWSPDGSSFLTSSEDKTLRIFSLPEN---GISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS 138 (304)
Q Consensus 62 ~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 138 (304)
.|.+++|||||++|++++. +.|.+||+.++ ... ....+...+..++| +|||
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~------------------~l~~~~~~~~~~~~-------SPDG 163 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVR------------------QLTHGEGFATDAKL-------SPKG 163 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCC------------------BCCCSSSCEEEEEE-------CTTS
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEE------------------EcccCCcccccccC-------CCCC
Confidence 4899999999999999886 89999999865 221 11122355677776 8899
Q ss_pred cEEEEEeCCCCEEEEEcCCCeeeEEeecccccc-----------cccceEEEEECCCCcEEEEE-cCC------------
Q 022019 139 CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVD-----------EITAAFSVAFNPTGTKIFAG-YNK------------ 194 (304)
Q Consensus 139 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~-----------~~~~v~~i~~~~~~~~l~~~-~d~------------ 194 (304)
++|++++. +.|++||+.+++............ ....+.++.|+|||++|+.+ .|+
T Consensus 164 ~~la~~~~-~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~ 242 (741)
T 2ecf_A 164 GFVSFIRG-RNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVY 242 (741)
T ss_dssp SEEEEEET-TEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEEC
T ss_pred CEEEEEeC-CcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCC
Confidence 99999874 589999999887654433221100 00114789999999998844 544
Q ss_pred ---------------------eEEEEEcCC-CCccceeeeeeeccccccccceeEEEeecCCCcEEEEEec-----CCeE
Q 022019 195 ---------------------SVRVFDVHR-PGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSY-----SQTS 247 (304)
Q Consensus 195 ---------------------~i~v~d~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~-----dg~i 247 (304)
.|++||+.. ... . .+. ....+...+..++| | ++..|++++. +..|
T Consensus 243 p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~--~---~~~-~~~~~~~~~~~~~~-p-Dg~~l~~~~~~~~~~~~~i 314 (741)
T 2ecf_A 243 ADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQT--Q---WID-LGKEQDIYLARVNW-R-DPQHLSFQRQSRDQKKLDL 314 (741)
T ss_dssp SSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCC--E---EEC-CCSCSSEEEEEEEE-E-ETTEEEEEEEETTSSEEEE
T ss_pred CCcccceEeecCCCCCCCCeeEEEEEECCCCCce--E---Eec-CCCCcceEEEEEEe-C-CCCEEEEEEecccCCeEEE
Confidence 788888865 421 1 111 01245677899999 9 5666665543 5679
Q ss_pred EEEecCCceEeEEeccccC----CeEEEEECCCCcEEEEeeccCCeEEEEecc
Q 022019 248 AIYREDNMELLYVLHGQEG----GVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 248 ~i~d~~~~~~~~~~~~~~~----~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~ 296 (304)
++||+.+++....+..+.. .+.+++|+|||+++++++ .||.+.||.+.
T Consensus 315 ~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~-~~g~~~l~~~~ 366 (741)
T 2ecf_A 315 VEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSE-RTGFQHLYRID 366 (741)
T ss_dssp EEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEEC-TTSSCEEEEEC
T ss_pred EEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEec-CCCccEEEEEc
Confidence 9999999887777665543 356899999999888888 89988888765
No 148
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.84 E-value=1.9e-19 Score=159.61 Aligned_cols=228 Identities=10% Similarity=0.013 Sum_probs=145.6
Q ss_pred ceeeecCCCcccccccceeeeecCCCC---ceeEEEEcCCCCeEEEecCC---------CeEEEeeCCCCCCcccccccc
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNN---FLKGIKWSPDGSSFLTSSED---------KTLRIFSLPENGISYDVNACS 102 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~---~V~~i~~s~~~~~l~s~~~d---------g~v~vwd~~~~~~~~~~~~~~ 102 (304)
.+..|+........ .+.+|.. .|.+++|||||++|++++.+ +.+.+||+.++... .+...
T Consensus 38 ~i~~~d~~~g~~~~------~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~- 109 (723)
T 1xfd_A 38 TVRLWNVETNTSTV------LIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQ-SLDPP- 109 (723)
T ss_dssp CEEEBCGGGCCCEE------EECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCE-ECCCT-
T ss_pred CEEEEECCCCcEEE------EeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceE-eccCC-
Confidence 35566665543322 4455654 49999999999999998764 78889999876431 11000
Q ss_pred ccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccc----c------
Q 022019 103 LAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVD----E------ 172 (304)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~----~------ 172 (304)
..+...+..+ +|||||+.|++++. +.|++||+.+++.......+.... .
T Consensus 110 -------------~~~~~~~~~~-------~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ 168 (723)
T 1xfd_A 110 -------------EVSNAKLQYA-------GWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYE 168 (723)
T ss_dssp -------------TCCSCCCSBC-------CBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHH
T ss_pred -------------cccccccccc-------EECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEE
Confidence 0011123344 44899999999886 789999999887665444322100 0
Q ss_pred ---ccceEEEEECCCCcEEEE-EcCC----------------------------------eEEEEEcCCCCccceeeeee
Q 022019 173 ---ITAAFSVAFNPTGTKIFA-GYNK----------------------------------SVRVFDVHRPGRDFEKYSTL 214 (304)
Q Consensus 173 ---~~~v~~i~~~~~~~~l~~-~~d~----------------------------------~i~v~d~~~~~~~~~~~~~~ 214 (304)
...+.+++|+|||+.|+. +.++ .|++||+..... ...+..
T Consensus 169 ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~-~~~l~~- 246 (723)
T 1xfd_A 169 EEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTH-DLEMMP- 246 (723)
T ss_dssp HTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCC-CEECCC-
T ss_pred EEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCce-eEEeeC-
Confidence 012378999999999984 3332 788999876421 111110
Q ss_pred eccccccccceeEEEeecCCCcEEEEEecC----CeEEEEecCCceEeEEecc-ccCCe----EEEEECCCCcEEEEe-e
Q 022019 215 KGNKEGQAGIMSAIAFSPTHTGMLAIGSYS----QTSAIYREDNMELLYVLHG-QEGGV----THVQFSRDGNYLYTG-G 284 (304)
Q Consensus 215 ~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~-~~~~v----~~~~~~~~~~~l~~~-~ 284 (304)
......+...+..++|+| +++++++.+.. ..|++||+.++++...+.. +...+ ..++|+|||++|+.. +
T Consensus 247 ~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 325 (723)
T 1xfd_A 247 PDDPRMREYYITMVKWAT-STKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRA 325 (723)
T ss_dssp CCCGGGSSEEEEEEEESS-SSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEE
T ss_pred CccCCCccceeEEEEEeC-CCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEe
Confidence 001112356688999999 66677666543 5799999998887666543 33444 378999999987754 3
Q ss_pred ccCC------eEEEEe
Q 022019 285 RKDP------YILCWD 294 (304)
Q Consensus 285 ~~d~------~i~vwd 294 (304)
..++ .|.+||
T Consensus 326 ~~~~~~~~~~~l~~~d 341 (723)
T 1xfd_A 326 IPQGGRGKFYHITVSS 341 (723)
T ss_dssp ECCSSSSCEEEEEEEC
T ss_pred cccCCCcceeEEEEEe
Confidence 2667 577777
No 149
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.84 E-value=7.1e-19 Score=155.51 Aligned_cols=206 Identities=17% Similarity=0.203 Sum_probs=139.3
Q ss_pred eeEEEEcCCCCeEEEec---------------------------------CCCeEEEeeCCCCCCccccccccccccCCc
Q 022019 63 LKGIKWSPDGSSFLTSS---------------------------------EDKTLRIFSLPENGISYDVNACSLAKDQDS 109 (304)
Q Consensus 63 V~~i~~s~~~~~l~s~~---------------------------------~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~ 109 (304)
+.++.|+|||++|++++ .+..|.+||+.++......
T Consensus 183 ~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~----------- 251 (706)
T 2z3z_A 183 EKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQ----------- 251 (706)
T ss_dssp CCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECC-----------
T ss_pred CceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeec-----------
Confidence 58999999999999987 4467999998765321100
Q ss_pred cceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCC-----CEEEEEcCCCeeeEEeecccccccccceEEEEECC-
Q 022019 110 YEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDH-----PIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNP- 183 (304)
Q Consensus 110 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~- 183 (304)
....+...+..++| +|+|+.|++++.++ .|++||+.+++....+...........+.++.|+|
T Consensus 252 ----~~~~~~~~~~~~~~-------spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~ 320 (706)
T 2z3z_A 252 ----TGEPKEKFLTNLSW-------SPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPG 320 (706)
T ss_dssp ----CCSCTTCEEEEEEE-------CTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTT
T ss_pred ----cCCCCceeEeeEEE-------ECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecC
Confidence 00123356777777 88999999887775 89999999983333332111111111246789999
Q ss_pred -CCcEEEEE-cCCeEEEEEcCCCCccceeeeeeeccccccccceeE-EEeecCCCcEEEEEecCC----eEEEEecCCce
Q 022019 184 -TGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSA-IAFSPTHTGMLAIGSYSQ----TSAIYREDNME 256 (304)
Q Consensus 184 -~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~p~~~~~l~~~~~dg----~i~i~d~~~~~ 256 (304)
+|++++++ .++.++||++...+... ..+ ..+...+.. ++|+|++..++++++.++ .|..||+.+++
T Consensus 321 ~dg~~l~~~~~~g~~~l~~~~~~~~~~---~~l----~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~ 393 (706)
T 2z3z_A 321 SNNQFIWQSRRDGWNHLYLYDTTGRLI---RQV----TKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK 393 (706)
T ss_dssp CSSEEEEEECTTSSCEEEEEETTSCEE---EEC----CCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC
T ss_pred CCCEEEEEEccCCccEEEEEECCCCEE---Eec----CCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC
Confidence 99988866 88889999886322211 222 334455665 799995555556666665 67777877665
Q ss_pred EeEEeccccCCeEEEEECCCCcEEEEeeccC---CeEEEEecccce
Q 022019 257 LLYVLHGQEGGVTHVQFSRDGNYLYTGGRKD---PYILCWDLRKAV 299 (304)
Q Consensus 257 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d---~~i~vwd~~~~~ 299 (304)
...+. |...+.+++|+|||++|+.++..+ +.|.+||+.+++
T Consensus 394 -~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 394 -TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp -CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred -ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 34444 667799999999999988775222 569999998875
No 150
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.84 E-value=5.2e-19 Score=156.35 Aligned_cols=240 Identities=14% Similarity=0.128 Sum_probs=152.9
Q ss_pred ceeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCC-----CCCccccccccccccCCc
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPE-----NGISYDVNACSLAKDQDS 109 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~-----~~~~~~~~~~~~~~~~~~ 109 (304)
.+..|++..... ..+..+...+.+++|+|||++|+++ .|+.|.+||+.+ ++............ ..
T Consensus 102 ~i~~~d~~~~~~-------~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~--~~ 171 (706)
T 2z3z_A 102 GLVGFDMLARKV-------TYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETL--VY 171 (706)
T ss_dssp EEEEEETTTTEE-------EEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTE--EE
T ss_pred EEEEEECCCCce-------EEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCe--Ec
Confidence 445566554432 2344567789999999999999985 679999999986 43321110000000 00
Q ss_pred cceEEEeecCCeEEEEeecCccceeCCCccEEEEEe---------------------------------CCCCEEEEEcC
Q 022019 110 YEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTT---------------------------------RDHPIHLWDAT 156 (304)
Q Consensus 110 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~---------------------------------~dg~i~i~d~~ 156 (304)
... ....+...+..+. |+|||++|++++ .+..|++||+.
T Consensus 172 g~~-~~~ee~~~~~~~~-------~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~ 243 (706)
T 2z3z_A 172 GQA-VHQREFGIEKGTF-------WSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLA 243 (706)
T ss_dssp SSC-CGGGCTTCCCSEE-------ECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETT
T ss_pred ccc-hhhhhcCCCceEE-------ECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECC
Confidence 000 0000001123444 489999999987 44679999999
Q ss_pred CCeeeEEeecccccccccceEEEEECCCCcEEEE-EcCC-----eEEEEEcCCCCccceeeeeeeccccccccceeEEEe
Q 022019 157 TGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA-GYNK-----SVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAF 230 (304)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~-~~d~-----~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 230 (304)
+++........ .+...+.+++|+|+|+.|++ +.++ .|++||+.++.. ...+.. .........+.+++|
T Consensus 244 ~~~~~~~~~~~---~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~-~~~~~~--~~~~~~~~~~~~~~~ 317 (706)
T 2z3z_A 244 TGKTVYLQTGE---PKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRF-VRTLFV--ETDKHYVEPLHPLTF 317 (706)
T ss_dssp TTEEEECCCCS---CTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCE-EEEEEE--EECSSCCCCCSCCEE
T ss_pred CCceEeeccCC---CCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCce-eeEEEE--ccCCCeECccCCcee
Confidence 88765433211 12237889999999998885 4554 899999976411 111111 000111123467899
Q ss_pred ec--CCCcEEEEEecCCeEEEEecC-CceEeEEeccccCCeEE-EEECCCCcEEEEeeccCC----eEEEEecccce
Q 022019 231 SP--THTGMLAIGSYSQTSAIYRED-NMELLYVLHGQEGGVTH-VQFSRDGNYLYTGGRKDP----YILCWDLRKAV 299 (304)
Q Consensus 231 ~p--~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~~~~d~----~i~vwd~~~~~ 299 (304)
+| ++ .++++++.||.++||++. .+..+..+..+...+.. ++|+|+|+.|+.++..++ .|..||+.+++
T Consensus 318 sp~~dg-~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~ 393 (706)
T 2z3z_A 318 LPGSNN-QFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK 393 (706)
T ss_dssp CTTCSS-EEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC
T ss_pred ecCCCC-EEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC
Confidence 99 65 488888899999999876 56777788878777877 799999998877663554 67777776654
No 151
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.83 E-value=4.7e-20 Score=163.32 Aligned_cols=203 Identities=10% Similarity=0.091 Sum_probs=134.9
Q ss_pred EEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCC---eEEEEeecCccceeCCCccEE
Q 022019 65 GIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGE---SVYDFCWFPHMSASDPTSCVF 141 (304)
Q Consensus 65 ~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~~~~~~l 141 (304)
+++|+|+|+++++ +.|++|++||+.+++.... ...+.. .+..++| ||||++|
T Consensus 20 ~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~-----------------~~~~~~~~~~~~~~~~-------SpDg~~l 74 (719)
T 1z68_A 20 FPNWISGQEYLHQ-SADNNIVLYNIETGQSYTI-----------------LSNRTMKSVNASNYGL-------SPDRQFV 74 (719)
T ss_dssp CCEESSSSEEEEE-CTTSCEEEEESSSCCEEEE-----------------ECHHHHHTTTCSEEEE-------CTTSSEE
T ss_pred ccEECCCCeEEEE-cCCCCEEEEEcCCCcEEEE-----------------EccccccccceeeEEE-------CCCCCeE
Confidence 6899999966555 4699999999986643211 111111 2445555 8999999
Q ss_pred EEEeC---------CCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccceeee
Q 022019 142 ASTTR---------DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYS 212 (304)
Q Consensus 142 ~~~~~---------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~ 212 (304)
++++. ++.|++||+.+++........ ..+..++|+|||+.|+.+.++.|++||+..+.. .....
T Consensus 75 a~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~------~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~-~~l~~ 147 (719)
T 1z68_A 75 YLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELP------RPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPP-FQITF 147 (719)
T ss_dssp EEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCC------SSBCCEEECSSTTCEEEEETTEEEEESSTTSCC-EECCC
T ss_pred EEEecCceeEEeecceEEEEEECCCCccccceecC------cccccceECCCCCEEEEEECCeEEEEeCCCCCc-EEEec
Confidence 98876 789999999988762111111 167789999999999977899999999976422 11000
Q ss_pred eeec--ccccccc---------ceeEEEeecCCCcEEEEEecCC----------------------------------eE
Q 022019 213 TLKG--NKEGQAG---------IMSAIAFSPTHTGMLAIGSYSQ----------------------------------TS 247 (304)
Q Consensus 213 ~~~~--~~~~~~~---------~v~~~~~~p~~~~~l~~~~~dg----------------------------------~i 247 (304)
.-.. ...++.. ...+++|+| +++.|++++.|. .|
T Consensus 148 ~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSP-DG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l 226 (719)
T 1z68_A 148 NGRENKIFNGIPDWVYEEEMLATKYALWWSP-NGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRI 226 (719)
T ss_dssp CCBTTTEEESSCCHHHHHHTTCSSCCEEECT-TSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEE
T ss_pred CCCcCCeEcccccceeeeecccCcccEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEE
Confidence 0000 0011111 125899999 677788777552 78
Q ss_pred EEEecCCceEe--------EEeccccCCeEEEEECCCCcEEEEeec-cC--CeEEEEe----ccccee
Q 022019 248 AIYREDNMELL--------YVLHGQEGGVTHVQFSRDGNYLYTGGR-KD--PYILCWD----LRKAVQ 300 (304)
Q Consensus 248 ~i~d~~~~~~~--------~~~~~~~~~v~~~~~~~~~~~l~~~~~-~d--~~i~vwd----~~~~~~ 300 (304)
++||+.+++.. ..+.+|...+.+++|+||++++++... .+ ..|.+|| +.+++.
T Consensus 227 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~ 294 (719)
T 1z68_A 227 FIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDC 294 (719)
T ss_dssp EEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEEC
T ss_pred EEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCce
Confidence 89999887642 123467788999999999887776441 12 3588899 766654
No 152
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.83 E-value=1.3e-17 Score=135.73 Aligned_cols=214 Identities=12% Similarity=0.130 Sum_probs=134.5
Q ss_pred CCCceeEEEEcCCCCeEEEecCC----CeEEEeeCCCCCCccccccccccccCCccceEEEee-cCCeEEEEeecCccce
Q 022019 59 PNNFLKGIKWSPDGSSFLTSSED----KTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVT-EGESVYDFCWFPHMSA 133 (304)
Q Consensus 59 h~~~V~~i~~s~~~~~l~s~~~d----g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~ 133 (304)
|...+..++|+|+|++|++++.+ +.|.+|++....-. ........ +......+ +
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~--------------~~~~~~~~~~~~~p~~~-------~ 106 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGT--------------LHLLNTQKTMGADPCYL-------T 106 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTE--------------EEEEEEEECSSSCEEEE-------E
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCc--------------EEEeeEeccCCCCcEEE-------E
Confidence 67778899999999999998875 79999998642100 00000111 12223333 3
Q ss_pred eCCCccEEEEEe-CCCCEEEEEcCCCeeeEEe----ecccc-----cccccceEEEEECCCCcEEE-EE-cCCeEEEEEc
Q 022019 134 SDPTSCVFASTT-RDHPIHLWDATTGLLRCTY----RAYDA-----VDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDV 201 (304)
Q Consensus 134 ~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~----~~~~~-----~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~v~d~ 201 (304)
+ +++++++++ .++.|.+|++......... ..... ......+.+++|+|+|++++ ++ .++.|.+|++
T Consensus 107 ~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~ 184 (361)
T 3scy_A 107 T--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNI 184 (361)
T ss_dssp E--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred E--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEE
Confidence 3 666666665 6789999999754322111 11100 01122457899999999777 45 6899999999
Q ss_pred CCCCc----c-ceeeeeeeccccccccceeEEEeecCCCcEEEEEe-cCCeEEEEecCCceE--eEEec---cccCCeEE
Q 022019 202 HRPGR----D-FEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS-YSQTSAIYREDNMEL--LYVLH---GQEGGVTH 270 (304)
Q Consensus 202 ~~~~~----~-~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~-~dg~i~i~d~~~~~~--~~~~~---~~~~~v~~ 270 (304)
..... . +................+..++|+| +++++++++ .++.|.+||+.+++. +..+. .+......
T Consensus 185 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~ 263 (361)
T 3scy_A 185 NPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNS-DGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGD 263 (361)
T ss_dssp CTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECT-TSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEE
T ss_pred cCCCCcccccceeecccccceecCCCCCCeEEEEcC-CCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCccc
Confidence 76432 1 2111000000122234468899999 565565555 689999999987653 33332 33345789
Q ss_pred EEECCCCcEEEEeecc-CCeEEEEecc
Q 022019 271 VQFSRDGNYLYTGGRK-DPYILCWDLR 296 (304)
Q Consensus 271 ~~~~~~~~~l~~~~~~-d~~i~vwd~~ 296 (304)
++|+|||++|+++... ++.|.+|++.
T Consensus 264 i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 264 IHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp EEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred EEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 9999999999887734 5899999996
No 153
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.83 E-value=3.4e-19 Score=154.14 Aligned_cols=196 Identities=13% Similarity=0.061 Sum_probs=134.1
Q ss_pred CCceeEEEEcCCCCeEEEecC-CCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCc
Q 022019 60 NNFLKGIKWSPDGSSFLTSSE-DKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS 138 (304)
Q Consensus 60 ~~~V~~i~~s~~~~~l~s~~~-dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 138 (304)
..+|.+++|+|||++||+++. ||+++||++.++... .+...+...+..+.| +|+
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~-----------------~lt~~~~~~~~~~~~-------spd- 75 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETV-----------------KLNREPINSVLDPHY-------GVG- 75 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEE-----------------ECCSSCCSEECEECT-------TCS-
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcE-----------------eeecccccccccccC-------CCC-
Confidence 557999999999999999887 999999997533210 011112245666766 777
Q ss_pred cEEEEEeC---CCCEEEEEcCC---CeeeEEeecccccccccceEEEEECCCCcE--EEEEcCCeEEEEEcCCCCcccee
Q 022019 139 CVFASTTR---DHPIHLWDATT---GLLRCTYRAYDAVDEITAAFSVAFNPTGTK--IFAGYNKSVRVFDVHRPGRDFEK 210 (304)
Q Consensus 139 ~~l~~~~~---dg~i~i~d~~~---~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~--l~~~~d~~i~v~d~~~~~~~~~~ 210 (304)
+++++++. +....+|.+.. +... .+.... .+...+|+|+++. ++++.++.+.+||+.++. .
T Consensus 76 ~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~~------~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~--~-- 144 (582)
T 3o4h_A 76 RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEAVK------PMRILSGVDTGEAVVFTGATEDRVALYALDGGG--L-- 144 (582)
T ss_dssp EEEEEEECSTTSCCEEEEEEETTSTTCCE-ECTTSC------SBEEEEEEECSSCEEEEEECSSCEEEEEEETTE--E--
T ss_pred eEEEEeccCCCCcceEEEEEeccCCCccc-cccCCC------CceeeeeCCCCCeEEEEecCCCCceEEEccCCc--E--
Confidence 67777765 44456655432 2222 232221 2335677777754 334566666799997631 1
Q ss_pred eeeeeccccccccceeEEEeecCCCcEEEEEecC----CeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeecc
Q 022019 211 YSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS----QTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRK 286 (304)
Q Consensus 211 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~ 286 (304)
..+. . +.. .+++|+| +++.|++++.+ +.|++||+.+++.. .+..|...+..++|+|||++|+++. .
T Consensus 145 -~~l~---~-~~~--~~~~~sp-DG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~-~ 214 (582)
T 3o4h_A 145 -RELA---R-LPG--FGFVSDI-RGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLE-T 214 (582)
T ss_dssp -EEEE---E-ESS--CEEEEEE-ETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEE-C
T ss_pred -EEee---c-CCC--ceEEECC-CCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEcc-C
Confidence 1111 1 111 7899999 67788877776 77999999887754 6677888899999999999999777 8
Q ss_pred CC--eEEEEecccceee
Q 022019 287 DP--YILCWDLRKAVQV 301 (304)
Q Consensus 287 d~--~i~vwd~~~~~~~ 301 (304)
++ .|++||+.+++..
T Consensus 215 ~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 215 AREARLVTVDPRDGSVE 231 (582)
T ss_dssp SSCEEEEEECTTTCCEE
T ss_pred CCeeEEEEEcCCCCcEE
Confidence 88 8999999887653
No 154
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.83 E-value=3.9e-17 Score=132.83 Aligned_cols=224 Identities=13% Similarity=0.119 Sum_probs=137.0
Q ss_pred ecCCCCceeEEEEcCCCCeEEEec-CCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 56 SSIPNNFLKGIKWSPDGSSFLTSS-EDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 56 ~~~h~~~V~~i~~s~~~~~l~s~~-~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
...+......+++ ++++|++++ .++.|.+|++...................... ...+...+..+ ++
T Consensus 95 ~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~-------~~ 162 (361)
T 3scy_A 95 QKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDK---ERQTMPHLHCV-------RI 162 (361)
T ss_dssp EECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCT---TTCSSCCEEEE-------EE
T ss_pred eccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCc---cccCCCcceEE-------EE
Confidence 3345566778888 788777665 58899999997543322211100000000000 00011223444 44
Q ss_pred CCCccEEEEEe-CCCCEEEEEcCCCee------e------EEeecccccccccceEEEEECCCCcEEE-EE-cCCeEEEE
Q 022019 135 DPTSCVFASTT-RDHPIHLWDATTGLL------R------CTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVF 199 (304)
Q Consensus 135 ~~~~~~l~~~~-~dg~i~i~d~~~~~~------~------~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~v~ 199 (304)
+|+|+++++++ .++.|.+|++..... . ...... ....+..++|+|+|++++ ++ .++.|.+|
T Consensus 163 spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~spdg~~l~v~~~~~~~v~v~ 238 (361)
T 3scy_A 163 TPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVA----PGSGPRHLIFNSDGKFAYLINEIGGTVIAF 238 (361)
T ss_dssp CTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECC----TTCCEEEEEECTTSSEEEEEETTTCEEEEE
T ss_pred CCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecC----CCCCCeEEEEcCCCCEEEEEcCCCCeEEEE
Confidence 88998666555 578999999875431 1 111111 112567899999999887 45 68999999
Q ss_pred EcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEec--CCeEEEEecC--Cce--EeEEeccccCCeEEEEE
Q 022019 200 DVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSY--SQTSAIYRED--NME--LLYVLHGQEGGVTHVQF 273 (304)
Q Consensus 200 d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~--dg~i~i~d~~--~~~--~~~~~~~~~~~v~~~~~ 273 (304)
|+..+ .......... ...+......++|+| ++++|+++.. ++.|.+|++. +++ .+..+.. ...+.+++|
T Consensus 239 ~~~~g--~~~~~~~~~~-~~~~~~~~~~i~~sp-dg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~ 313 (361)
T 3scy_A 239 RYADG--MLDEIQTVAA-DTVNAQGSGDIHLSP-DGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFII 313 (361)
T ss_dssp EEETT--EEEEEEEEES-CSSCCCCEEEEEECT-TSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEE
T ss_pred EecCC--ceEEeEEEec-CCCCCCCcccEEECC-CCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEE
Confidence 99742 1222222221 122334467999999 5656655554 5899999985 333 4555554 456789999
Q ss_pred CCCCcEEEEeeccCCeEEEEec--cccee
Q 022019 274 SRDGNYLYTGGRKDPYILCWDL--RKAVQ 300 (304)
Q Consensus 274 ~~~~~~l~~~~~~d~~i~vwd~--~~~~~ 300 (304)
+|+|++|++++..++.|.+|++ .+++.
T Consensus 314 spdg~~l~~~~~~~~~v~v~~~d~~~g~~ 342 (361)
T 3scy_A 314 TPNGKYLLVACRDTNVIQIFERDQATGLL 342 (361)
T ss_dssp CTTSCEEEEEETTTTEEEEEEECTTTCCE
T ss_pred CCCCCEEEEEECCCCCEEEEEEECCCCcE
Confidence 9999999888756789999655 45543
No 155
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.82 E-value=6.1e-19 Score=162.08 Aligned_cols=195 Identities=13% Similarity=0.105 Sum_probs=148.3
Q ss_pred CCCceeEEEEc-CCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCC-eEEEEeecCccceeCC
Q 022019 59 PNNFLKGIKWS-PDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGE-SVYDFCWFPHMSASDP 136 (304)
Q Consensus 59 h~~~V~~i~~s-~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~ 136 (304)
|...|.+++|+ |||++|++++ ++.|.+|++.++... ....+.. .+..+.| +
T Consensus 294 ~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~------------------~~~~~~~~~~~~~~~-------s- 346 (1045)
T 1k32_A 294 SIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL------------------KVPEPLRIRYVRRGG-------D- 346 (1045)
T ss_dssp ECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEE------------------ECSCCSCEEEEEECS-------S-
T ss_pred cccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceE------------------EccCCCcceEEeeeE-------c-
Confidence 44579999999 9999999887 789999998754321 0111223 5666666 8
Q ss_pred CccEEEEEeCCCCEE-EEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeee
Q 022019 137 TSCVFASTTRDHPIH-LWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTL 214 (304)
Q Consensus 137 ~~~~l~~~~~dg~i~-i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~ 214 (304)
+|+.|++++.++.+. +||+.+++... +..+. ..+..++|+|+|++|+.+ .++.|++||+.++.. ..+
T Consensus 347 dg~~l~~~s~~~~l~~~~d~~~~~~~~-l~~~~-----~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~-----~~~ 415 (1045)
T 1k32_A 347 TKVAFIHGTREGDFLGIYDYRTGKAEK-FEENL-----GNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKP-----TVI 415 (1045)
T ss_dssp SEEEEEEEETTEEEEEEEETTTCCEEE-CCCCC-----CSEEEEEECTTSSEEEEEETTSEEEEEETTTCCE-----EEE
T ss_pred CCCeEEEEECCCceEEEEECCCCCceE-ecCCc-----cceeeeEECCCCCEEEEECCCCeEEEEECCCCce-----EEe
Confidence 899999999888888 99998776443 22222 278899999999999954 889999999986321 111
Q ss_pred eccccccccceeEEEeecCCCcEEEEEecCC----------eEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEee
Q 022019 215 KGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQ----------TSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGG 284 (304)
Q Consensus 215 ~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg----------~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 284 (304)
..+|...+.+++|+| ++++|++++.++ .|++||+.+++ +..+..|...+..++|+|||++|++++
T Consensus 416 ---~~~~~~~v~~~~~Sp-DG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s 490 (1045)
T 1k32_A 416 ---ERSREAMITDFTISD-NSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLS 490 (1045)
T ss_dssp ---EECSSSCCCCEEECT-TSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEE
T ss_pred ---ccCCCCCccceEECC-CCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEe
Confidence 134667789999999 666777776644 89999999887 667777888899999999999999999
Q ss_pred ccCCeEEEEeccc
Q 022019 285 RKDPYILCWDLRK 297 (304)
Q Consensus 285 ~~d~~i~vwd~~~ 297 (304)
.++...+|+...
T Consensus 491 -~~~~~~~~~~~~ 502 (1045)
T 1k32_A 491 -YRSLDPSPDRVV 502 (1045)
T ss_dssp -SCCCCCEECSSS
T ss_pred -cccCCcCcchhc
Confidence 788888887643
No 156
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.82 E-value=1.9e-17 Score=134.90 Aligned_cols=211 Identities=14% Similarity=0.186 Sum_probs=136.0
Q ss_pred CCCceeEEEEcCCCCeEEEecCCCeEEEeeCC-CCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCC
Q 022019 59 PNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLP-ENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPT 137 (304)
Q Consensus 59 h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 137 (304)
+...+..++|+|+|++|++++.+ .|.+|++. +++... ....... -.|..++++|+
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~----------------~~~~~~~-------g~~~~~~~spd 93 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVH----------------EASHPIG-------GHPRANDADTN 93 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEE----------------EEEEECC-------SSGGGGCTTSC
T ss_pred CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEE----------------eeEeecC-------CCCccEEECCC
Confidence 44568899999999999988887 99999985 332100 0000000 12455677999
Q ss_pred ccE--EEEEe-------------CCCCEEEEEcC-CCeeeEEeecccccccccceEEEEECCCCcEEEEE--cCCeEEEE
Q 022019 138 SCV--FASTT-------------RDHPIHLWDAT-TGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG--YNKSVRVF 199 (304)
Q Consensus 138 ~~~--l~~~~-------------~dg~i~i~d~~-~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~--~d~~i~v~ 199 (304)
|+. +++++ .+|.+.+|++. +++....+..... .+...+.+++|+|+|++++++ .++.|++|
T Consensus 94 g~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~ 172 (365)
T 1jof_A 94 TRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEY-QENTGIHGMVFDPTETYLYSADLTANKLWTH 172 (365)
T ss_dssp CEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEEC-CTTCCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred CCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEe-CCCCcceEEEECCCCCEEEEEcCCCCEEEEE
Confidence 994 44553 68999999997 4655443332100 112368899999999988854 57899999
Q ss_pred EcC-CCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEe-cCCeEEEEecC--CceEe---EE---ec----ccc
Q 022019 200 DVH-RPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS-YSQTSAIYRED--NMELL---YV---LH----GQE 265 (304)
Q Consensus 200 d~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~-~dg~i~i~d~~--~~~~~---~~---~~----~~~ 265 (304)
|+. .+. ........ ...+...+..++|+| +++++++++ .++.|.+|++. +++.. .. +. +|.
T Consensus 173 ~~~~~g~--~~~~~~~~--~~~~g~~p~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~ 247 (365)
T 1jof_A 173 RKLASGE--VELVGSVD--APDPGDHPRWVAMHP-TGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRD 247 (365)
T ss_dssp EECTTSC--EEEEEEEE--CSSTTCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBC
T ss_pred EECCCCC--EEEeeeEe--cCCCCCCCCEeEECC-CCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcc
Confidence 997 321 11111111 011234588999999 566666665 47899999765 45432 12 22 122
Q ss_pred C------CeEEEE-ECCCCcEEEEeeccCC-----eEEEEecc-cce
Q 022019 266 G------GVTHVQ-FSRDGNYLYTGGRKDP-----YILCWDLR-KAV 299 (304)
Q Consensus 266 ~------~v~~~~-~~~~~~~l~~~~~~d~-----~i~vwd~~-~~~ 299 (304)
. .+..++ |+|||++|++++..++ .|.+|++. +++
T Consensus 248 ~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~ 294 (365)
T 1jof_A 248 PETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGS 294 (365)
T ss_dssp TTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSC
T ss_pred cccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCC
Confidence 2 488999 9999999987763333 89999996 454
No 157
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.81 E-value=1.4e-18 Score=159.79 Aligned_cols=211 Identities=10% Similarity=0.037 Sum_probs=151.3
Q ss_pred eecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
.+..|. .+..++|+|||++|+++ .++.|.+|++...... ..... ..........+...+..++|
T Consensus 240 ~l~~~~-~~~~~~~SpDG~~la~~-~~~~i~~~d~~~~~l~-~l~~~------~~~~~~~~~~~~~~v~~~~~------- 303 (1045)
T 1k32_A 240 KHTSFT-DYYPRHLNTDGRRILFS-KGGSIYIFNPDTEKIE-KIEIG------DLESPEDRIISIPSKFAEDF------- 303 (1045)
T ss_dssp ECCCCC-SSCEEEEEESSSCEEEE-ETTEEEEECTTTCCEE-ECCCC------CCCBCCSEEEECGGGGEEEE-------
T ss_pred EecCCC-CcceeeEcCCCCEEEEE-eCCEEEEecCCceEee-eeccC------cccccccccccccccceeee-------
Confidence 344444 46778999999999887 4889999998432221 11110 00000111223344555555
Q ss_pred C-CCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEE-EcCCeEE-EEEcCCCCccceee
Q 022019 135 D-PTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA-GYNKSVR-VFDVHRPGRDFEKY 211 (304)
Q Consensus 135 ~-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~-~~d~~i~-v~d~~~~~~~~~~~ 211 (304)
+ |+|+.+++++ ++.|++|++..+.... +..+.. ..+..++|+ +|+.++. +.++.+. +||+.... .
T Consensus 304 S~pdG~~la~~~-~~~i~~~~~~~~~~~~-~~~~~~----~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~-----~ 371 (1045)
T 1k32_A 304 SPLDGDLIAFVS-RGQAFIQDVSGTYVLK-VPEPLR----IRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGK-----A 371 (1045)
T ss_dssp EECGGGCEEEEE-TTEEEEECTTSSBEEE-CSCCSC----EEEEEECSS-SEEEEEEEETTEEEEEEEETTTCC-----E
T ss_pred cCCCCCEEEEEE-cCEEEEEcCCCCceEE-ccCCCc----ceEEeeeEc-CCCeEEEEECCCceEEEEECCCCC-----c
Confidence 7 8999998888 7889999998776443 222211 167899999 9998884 4677788 88986531 1
Q ss_pred eeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccC----
Q 022019 212 STLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKD---- 287 (304)
Q Consensus 212 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d---- 287 (304)
..+ .++...+..++|+| ++..|++++.++.|++||+.+++....+.+|...+.+++|+|||++|++++ .+
T Consensus 372 ~~l----~~~~~~~~~~~~Sp-DG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~-~~~~~~ 445 (1045)
T 1k32_A 372 EKF----EENLGNVFAMGVDR-NGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGF-PLKHGE 445 (1045)
T ss_dssp EEC----CCCCCSEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEE-EECSST
T ss_pred eEe----cCCccceeeeEECC-CCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEe-cCcccc
Confidence 111 24556789999999 778999999999999999999988877778989999999999999999887 54
Q ss_pred ------CeEEEEecccce
Q 022019 288 ------PYILCWDLRKAV 299 (304)
Q Consensus 288 ------~~i~vwd~~~~~ 299 (304)
+.|++||+.+++
T Consensus 446 ~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 446 TDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp TCSCCEEEEEEEETTTTE
T ss_pred ccCCCCCeEEEEECCCCc
Confidence 499999998876
No 158
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.80 E-value=1.9e-18 Score=153.33 Aligned_cols=207 Identities=13% Similarity=0.137 Sum_probs=135.2
Q ss_pred ceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEE
Q 022019 62 FLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVF 141 (304)
Q Consensus 62 ~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l 141 (304)
...+++|+|||++++++ ||+|++||+.+++....... +......+. ....++||||++|
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~-----------------~~~~~~~~~--~~~~~~Spdg~~l 76 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLEN-----------------STFDEFGHS--INDYSISPDGQFI 76 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECT-----------------TTTTTCCSC--CCEEEECTTSSEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEec-----------------hhhhhhccc--ccceEECCCCCEE
Confidence 46689999999999886 89999999987653211111 110100000 0012449999999
Q ss_pred EEEeCC---------CCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccceeee
Q 022019 142 ASTTRD---------HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYS 212 (304)
Q Consensus 142 ~~~~~d---------g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~ 212 (304)
+.++.+ +.+.+||+.+++... +..+. ..+..++|||||+.|+.+.++.|++||+..+.. . .+.
T Consensus 77 ~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~-l~~~~-----~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~-~-~lt 148 (740)
T 4a5s_A 77 LLEYNYVKQWRHSYTASYDIYDLNKRQLIT-EERIP-----NNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPS-Y-RIT 148 (740)
T ss_dssp EEEEEEEECSSSCEEEEEEEEETTTTEECC-SSCCC-----TTEEEEEECSSTTCEEEEETTEEEEESSTTSCC-E-ECC
T ss_pred EEEECCeeeEEEccceEEEEEECCCCcEEE-cccCC-----CcceeeEECCCCCEEEEEECCeEEEEECCCCce-E-EEc
Confidence 999876 566799999987543 32222 278899999999999977889999999976421 1 100
Q ss_pred eeec----cccccc---------cceeEEEeecCCCcEEEEEecCC----------------------------------
Q 022019 213 TLKG----NKEGQA---------GIMSAIAFSPTHTGMLAIGSYSQ---------------------------------- 245 (304)
Q Consensus 213 ~~~~----~~~~~~---------~~v~~~~~~p~~~~~l~~~~~dg---------------------------------- 245 (304)
... ...++. +....+.||| +++.|+.++.|.
T Consensus 149 -~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSp-Dg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~ 226 (740)
T 4a5s_A 149 -WTGKEDIIYNGITDWVYEEEVFSAYSALWWSP-NGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNP 226 (740)
T ss_dssp -SCCBTTTEEESBCCHHHHHHTSSSSBCEEECT-TSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCC
T ss_pred -CCCCccceecCcccccccchhcCCCcceEECC-CCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCC
Confidence 000 001111 1224589999 666677664321
Q ss_pred --eEEEEecCC---ce--EeEEec------cccCCeEEEEECCCCcEEEEeec---cCCeEEEEecccce
Q 022019 246 --TSAIYREDN---ME--LLYVLH------GQEGGVTHVQFSRDGNYLYTGGR---KDPYILCWDLRKAV 299 (304)
Q Consensus 246 --~i~i~d~~~---~~--~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~---~d~~i~vwd~~~~~ 299 (304)
.|++||+.+ ++ ....+. +|...+..++|+|||+.++.... .+..|.+||+.+++
T Consensus 227 ~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 227 TVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp EEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred eeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 488899888 62 222333 37778999999999997665541 23479999999886
No 159
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.80 E-value=1.4e-17 Score=135.75 Aligned_cols=213 Identities=11% Similarity=0.114 Sum_probs=134.9
Q ss_pred ceeEEEEcCCCCe--EEEec-------------CCCeEEEeeCCC-CCCccccccccccccCCccceEEEeecCCeEEEE
Q 022019 62 FLKGIKWSPDGSS--FLTSS-------------EDKTLRIFSLPE-NGISYDVNACSLAKDQDSYEASLVVTEGESVYDF 125 (304)
Q Consensus 62 ~V~~i~~s~~~~~--l~s~~-------------~dg~v~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 125 (304)
.+.+++|+|+|++ ++++. .+|++.+|++.. ++...... .....+...+..+
T Consensus 84 ~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~-------------~~~~~~~~~~~~~ 150 (365)
T 1jof_A 84 HPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQ-------------NYEYQENTGIHGM 150 (365)
T ss_dssp SGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEE-------------EEECCTTCCEEEE
T ss_pred CCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEe-------------eEEeCCCCcceEE
Confidence 3667999999994 55654 689999999873 22110000 0000123445555
Q ss_pred eecCccceeCCCccEEEEEeC-CCCEEEEEcC-CCeeeEE--eecccccccccceEEEEECCCCcEEEE-E-cCCeEEEE
Q 022019 126 CWFPHMSASDPTSCVFASTTR-DHPIHLWDAT-TGLLRCT--YRAYDAVDEITAAFSVAFNPTGTKIFA-G-YNKSVRVF 199 (304)
Q Consensus 126 ~~~~~~~~~~~~~~~l~~~~~-dg~i~i~d~~-~~~~~~~--~~~~~~~~~~~~v~~i~~~~~~~~l~~-~-~d~~i~v~ 199 (304)
+| +|+|++++++.. ++.|++|++. +++.... +.... +...+..++|+|+|+++++ + .++.|.+|
T Consensus 151 ~~-------spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~---~g~~p~~~~~spdg~~l~v~~~~~~~v~v~ 220 (365)
T 1jof_A 151 VF-------DPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPD---PGDHPRWVAMHPTGNYLYALMEAGNRICEY 220 (365)
T ss_dssp EE-------CTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSS---TTCCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred EE-------CCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCC---CCCCCCEeEECCCCCEEEEEECCCCeEEEE
Confidence 55 889998887754 6789999998 6765322 22110 1226789999999999885 4 57899999
Q ss_pred EcCCCCccce----eeeeeecccccccc------ceeEEE-eecCCCcEEEEEec-CC-----eEEEEecC-CceEeE--
Q 022019 200 DVHRPGRDFE----KYSTLKGNKEGQAG------IMSAIA-FSPTHTGMLAIGSY-SQ-----TSAIYRED-NMELLY-- 259 (304)
Q Consensus 200 d~~~~~~~~~----~~~~~~~~~~~~~~------~v~~~~-~~p~~~~~l~~~~~-dg-----~i~i~d~~-~~~~~~-- 259 (304)
++........ .+..+.....++.. .+..++ |+| ++++|++++. ++ .|.+|++. +++...
T Consensus 221 ~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~sp-dG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~ 299 (365)
T 1jof_A 221 VIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTF-SGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQL 299 (365)
T ss_dssp EECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECT-TSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEE
T ss_pred EEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECC-CCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEee
Confidence 8864211111 11111111112222 478899 999 5556665554 33 89999986 555433
Q ss_pred -EeccccCCeEEEEECC---CCcEEEEeeccCCeEEEEecccc
Q 022019 260 -VLHGQEGGVTHVQFSR---DGNYLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 260 -~~~~~~~~v~~~~~~~---~~~~l~~~~~~d~~i~vwd~~~~ 298 (304)
.+..+...+..++|+| ||++|++++..++.|.+|++...
T Consensus 300 ~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 300 FLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred eeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 2333445567889999 89999999834599999998765
No 160
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.80 E-value=1.4e-17 Score=133.82 Aligned_cols=192 Identities=11% Similarity=0.115 Sum_probs=128.9
Q ss_pred CeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEE-EEEeCCCCEE
Q 022019 73 SSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVF-ASTTRDHPIH 151 (304)
Q Consensus 73 ~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l-~~~~~dg~i~ 151 (304)
++|++++.++.|.+||+.+++.... ...... .+.|..++++|+++.+ +++..++.|.
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~------------------~~~~~~----~~~~~~~~~s~dg~~l~v~~~~~~~v~ 59 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKV------------------ITIADA----GPTPMVPMVAPGGRIAYATVNKSESLV 59 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEE------------------EECTTC----TTCCCCEEECTTSSEEEEEETTTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEE------------------EEcCCC----CCCccceEEcCCCCEEEEEeCCCCeEE
Confidence 4789999999999999986533211 111110 0013344558899765 5556678999
Q ss_pred EEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-------------cCCeEEEEEcCCCCccceeeeeeeccc
Q 022019 152 LWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-------------YNKSVRVFDVHRPGRDFEKYSTLKGNK 218 (304)
Q Consensus 152 i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-------------~d~~i~v~d~~~~~~~~~~~~~~~~~~ 218 (304)
+||+.+++....+.......+...+.+++|+|++++++++ .++.|.+||+.... ....+.
T Consensus 60 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~----~~~~~~--- 132 (337)
T 1pby_B 60 KIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLS----RRKAFE--- 132 (337)
T ss_dssp EEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTE----EEEEEE---
T ss_pred EEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCc----EEEEEe---
Confidence 9999999887766543211111245689999999988855 47999999997531 111111
Q ss_pred cccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEecccc---------------------------------
Q 022019 219 EGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQE--------------------------------- 265 (304)
Q Consensus 219 ~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--------------------------------- 265 (304)
....+.+++|+| ++.+|+++ ++.|++||+.+++.+..+..+.
T Consensus 133 --~~~~~~~~~~s~-dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~ 207 (337)
T 1pby_B 133 --APRQITMLAWAR-DGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARK 207 (337)
T ss_dssp --CCSSCCCEEECT-TSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBT
T ss_pred --CCCCcceeEECC-CCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeecccc
Confidence 123467889999 55556655 6889999998887665543221
Q ss_pred ---------------------------------CCeEEEEECCCCcEEEEeeccCCeEEEEecccceee
Q 022019 266 ---------------------------------GGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 266 ---------------------------------~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
..+.+++|+|+|++|+++ ++.|.+||+.+++.+
T Consensus 208 ~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~---~~~v~~~d~~~~~~~ 273 (337)
T 1pby_B 208 DIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA---YNVLESFDLEKNASI 273 (337)
T ss_dssp TSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE---ESEEEEEETTTTEEE
T ss_pred ccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe---CCeEEEEECCCCcCc
Confidence 134568999999998877 578999999887654
No 161
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.80 E-value=5.4e-19 Score=156.57 Aligned_cols=231 Identities=13% Similarity=0.107 Sum_probs=145.9
Q ss_pred ceeeecCCCcccccccceeeeecCCCC---ceeEEEEcCCCCeEEEecC---------CCeEEEeeCCCCCCcccccccc
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNN---FLKGIKWSPDGSSFLTSSE---------DKTLRIFSLPENGISYDVNACS 102 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~---~V~~i~~s~~~~~l~s~~~---------dg~v~vwd~~~~~~~~~~~~~~ 102 (304)
.+..|+........ .+.+|.. .|.+++|||||++|++++. ++.|++||+.+++......
T Consensus 37 ~i~~~~~~~g~~~~------~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~--- 107 (719)
T 1z68_A 37 NIVLYNIETGQSYT------ILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNE--- 107 (719)
T ss_dssp CEEEEESSSCCEEE------EECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSC---
T ss_pred CEEEEEcCCCcEEE------EEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcccccee---
Confidence 45566666554332 3333333 4899999999999998876 7899999998764310000
Q ss_pred ccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeeccccc----ccc-----
Q 022019 103 LAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAV----DEI----- 173 (304)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~----~~~----- 173 (304)
+ ...+..++| ||||+.|+++. ++.|++||+.+++........... ++.
T Consensus 108 -----------l----~~~~~~~~~-------SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ 164 (719)
T 1z68_A 108 -----------L----PRPIQYLCW-------SPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYE 164 (719)
T ss_dssp -----------C----CSSBCCEEE-------CSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHH
T ss_pred -----------c----CcccccceE-------CCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceee
Confidence 0 023444555 88999999986 779999999888764322111100 000
Q ss_pred ----cceEEEEECCCCcEEEE-EcCC----------------------------------eEEEEEcCCCCcc-ceeeee
Q 022019 174 ----TAAFSVAFNPTGTKIFA-GYNK----------------------------------SVRVFDVHRPGRD-FEKYST 213 (304)
Q Consensus 174 ----~~v~~i~~~~~~~~l~~-~~d~----------------------------------~i~v~d~~~~~~~-~~~~~~ 213 (304)
....+++|+|||+.|+. +.|. .|++||+..+... ...+.
T Consensus 165 ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~- 243 (719)
T 1z68_A 165 EEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVP- 243 (719)
T ss_dssp HHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECC-
T ss_pred eecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEcc-
Confidence 11248999999999994 4331 7889998753210 00000
Q ss_pred eeccccccccceeEEEeecCCCcEEEEEecC----CeEEEEe----cCCceEeEEe----ccccCCeE-----EEEECCC
Q 022019 214 LKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS----QTSAIYR----EDNMELLYVL----HGQEGGVT-----HVQFSRD 276 (304)
Q Consensus 214 ~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d----g~i~i~d----~~~~~~~~~~----~~~~~~v~-----~~~~~~~ 276 (304)
......++...+..++|+|+ +.++++.... ..|.+|| +.++++...+ .+|...+. .+.|+||
T Consensus 244 ~~~~~~~~~~~~~~~~~SpD-~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spd 322 (719)
T 1z68_A 244 VPAMIASSDYYFSWLTWVTD-ERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYD 322 (719)
T ss_dssp CCHHHHTSCEEEEEEEESSS-SEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTT
T ss_pred CCccCCCCcceEEEeEEeCC-CeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCC
Confidence 00112356777899999995 7777765433 2488999 8787766555 46777776 8999999
Q ss_pred CcEEEEe-eccCC--eEEEEecccce
Q 022019 277 GNYLYTG-GRKDP--YILCWDLRKAV 299 (304)
Q Consensus 277 ~~~l~~~-~~~d~--~i~vwd~~~~~ 299 (304)
|+.|+.. +..+| .|.+||+.+++
T Consensus 323 g~~l~~~~~~~~g~~~l~~~~~~~~~ 348 (719)
T 1z68_A 323 AISYYKIFSDKDGYKHIHYIKDTVEN 348 (719)
T ss_dssp SSCEEEEEECTTSCEEEEEESSCSTT
T ss_pred CCeEEEEEEccCCceEEEEEECCCCc
Confidence 9966542 21455 57777776653
No 162
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.80 E-value=9e-18 Score=135.70 Aligned_cols=201 Identities=12% Similarity=0.064 Sum_probs=135.0
Q ss_pred EEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEE-E
Q 022019 65 GIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFA-S 143 (304)
Q Consensus 65 ~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~-~ 143 (304)
++++++++.++++++.++.|.+||+.+++..... .. .. .+.|..++++|+++.++ +
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~----------------~~--~~-----~~~~~~~~~s~dg~~~~v~ 60 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSC----------------VM--PD-----KFGPGTAMMAPDNRTAYVL 60 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEE----------------EC--SS-----CCSSCEEEECTTSSEEEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEE----------------ec--CC-----CCCCceeEECCCCCEEEEE
Confidence 4567888889999999999999999865432111 11 11 01233345588998654 5
Q ss_pred EeCCCCEEEEEcCCCeeeEEeeccccc-ccccceEEEEECCCCcEEEEE-c------------CCeEEEEEcCCCCccce
Q 022019 144 TTRDHPIHLWDATTGLLRCTYRAYDAV-DEITAAFSVAFNPTGTKIFAG-Y------------NKSVRVFDVHRPGRDFE 209 (304)
Q Consensus 144 ~~~dg~i~i~d~~~~~~~~~~~~~~~~-~~~~~v~~i~~~~~~~~l~~~-~------------d~~i~v~d~~~~~~~~~ 209 (304)
+..++.|.+||+.+++....+...... .....+.+++|+|+|++++++ . ++.|.+||+.+.. ...
T Consensus 61 ~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~-~~~ 139 (349)
T 1jmx_B 61 NNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL-EAK 139 (349)
T ss_dssp ETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG-GBC
T ss_pred eCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcc-ccc
Confidence 557899999999999877666543210 001146789999999999965 4 4999999997531 111
Q ss_pred eeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEecccc------------------------
Q 022019 210 KYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQE------------------------ 265 (304)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~------------------------ 265 (304)
..... .+...+.+++|+| ++. +++++ +.|.+||+.+++.+..+..+.
T Consensus 140 ~~~~~-----~~~~~~~~~~~s~-dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (349)
T 1jmx_B 140 PVRTF-----PMPRQVYLMRAAD-DGS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEF 210 (349)
T ss_dssp CSEEE-----ECCSSCCCEEECT-TSC-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEE
T ss_pred eeeec-----cCCCcccceeECC-CCc-EEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeE
Confidence 11111 1222478899999 555 44443 449999998887766654321
Q ss_pred --------------------------------------------CCeEEEEECC-CCcEEEEeeccCCeEEEEeccccee
Q 022019 266 --------------------------------------------GGVTHVQFSR-DGNYLYTGGRKDPYILCWDLRKAVQ 300 (304)
Q Consensus 266 --------------------------------------------~~v~~~~~~~-~~~~l~~~~~~d~~i~vwd~~~~~~ 300 (304)
..+.+++|+| +|++|+++ ++.|.+||+.+++.
T Consensus 211 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~---~~~v~~~d~~~~~~ 287 (349)
T 1jmx_B 211 SMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV---LNRLAKYDLKQRKL 287 (349)
T ss_dssp EEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE---ESEEEEEETTTTEE
T ss_pred EeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE---cCeEEEEECccCeE
Confidence 1345678889 99999877 67999999998865
Q ss_pred e
Q 022019 301 V 301 (304)
Q Consensus 301 ~ 301 (304)
+
T Consensus 288 ~ 288 (349)
T 1jmx_B 288 I 288 (349)
T ss_dssp E
T ss_pred E
Confidence 3
No 163
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.79 E-value=3.6e-16 Score=126.94 Aligned_cols=229 Identities=9% Similarity=0.078 Sum_probs=137.6
Q ss_pred eeeecCCCcccccccceeeeecCCCCceeEEEEcCCCCeEEEec----------CCCeEEEeeCCCCCCccccccccccc
Q 022019 36 LIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSS----------EDKTLRIFSLPENGISYDVNACSLAK 105 (304)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~i~~s~~~~~l~s~~----------~dg~v~vwd~~~~~~~~~~~~~~~~~ 105 (304)
++.||....+.. ..+..+..+ .++|+|||++++++. .++.|.+||..+.+....+.
T Consensus 33 v~v~D~~t~~~~------~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~------ 98 (361)
T 2oiz_A 33 VHVYDYTNGKFL------GMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEIS------ 98 (361)
T ss_dssp EEEEETTTCCEE------EEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEE------
T ss_pred EEEEECCCCeEE------EEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEE------
Confidence 456665544433 244445555 899999999998876 36789999987654322211
Q ss_pred cCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeC--CCCEEEEEcCCCeeeEE-eecccccccccceEEEEEC
Q 022019 106 DQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTR--DHPIHLWDATTGLLRCT-YRAYDAVDEITAAFSVAFN 182 (304)
Q Consensus 106 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~-~~~~~~~~~~~~v~~i~~~ 182 (304)
.... . ....-.|..++++|+|++|+++.. +++|.+||+.+++.+.. +.... ...+.+.
T Consensus 99 ----------~~~~-~-~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~-------~~~v~~~ 159 (361)
T 2oiz_A 99 ----------LPPK-R-VQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAG-------CWSVIPQ 159 (361)
T ss_dssp ----------ECTT-B-CCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTT-------EEEEEEC
T ss_pred ----------cCcc-c-cccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCC-------cceeEEc
Confidence 1000 0 000113566778999999998874 57899999999987766 44322 1123334
Q ss_pred CCC-cEEE-EEcCCeEEEEEcCCCCccc----------------------------------------------eeeeee
Q 022019 183 PTG-TKIF-AGYNKSVRVFDVHRPGRDF----------------------------------------------EKYSTL 214 (304)
Q Consensus 183 ~~~-~~l~-~~~d~~i~v~d~~~~~~~~----------------------------------------------~~~~~~ 214 (304)
|++ ..++ .+.||.+.+|++...+... ......
T Consensus 160 p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~ 239 (361)
T 2oiz_A 160 PNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPW 239 (361)
T ss_dssp TTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEE
T ss_pred CCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccc
Confidence 433 1222 2244444444433211100 000000
Q ss_pred eccc-----cc-cccceeEEEeecCCCcEEEEEec----------CCeEEEEecCCceEeEEeccccCCeEEEEECCCCc
Q 022019 215 KGNK-----EG-QAGIMSAIAFSPTHTGMLAIGSY----------SQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGN 278 (304)
Q Consensus 215 ~~~~-----~~-~~~~v~~~~~~p~~~~~l~~~~~----------dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~ 278 (304)
.... .+ .......++|+|+++.++++... .+.|.+||+.+++.+.++..+. +.+++|+|||+
T Consensus 240 ~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~ 317 (361)
T 2oiz_A 240 SLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRN 317 (361)
T ss_dssp ESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTT
T ss_pred cccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCC
Confidence 0000 00 00111237899955555544431 3489999999999999998776 89999999999
Q ss_pred EEEEeeccCCeEEEEecccc--eee
Q 022019 279 YLYTGGRKDPYILCWDLRKA--VQV 301 (304)
Q Consensus 279 ~l~~~~~~d~~i~vwd~~~~--~~~ 301 (304)
+|++++ . +.|.+||+.++ +.+
T Consensus 318 ~l~v~n-~-~~v~v~D~~t~~l~~~ 340 (361)
T 2oiz_A 318 LMLTLD-G-GNVNVYDISQPEPKLL 340 (361)
T ss_dssp EEEEEC-S-SCEEEEECSSSSCEEE
T ss_pred EEEEeC-C-CeEEEEECCCCcceee
Confidence 999988 6 99999999998 654
No 164
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.78 E-value=7.9e-18 Score=145.57 Aligned_cols=194 Identities=14% Similarity=0.118 Sum_probs=133.9
Q ss_pred eecCCC-CceeEEEEcCCCCeEEEecC---CCeEEEeeCCC--CCCccccccccccccCCccceEEEeecCCeEEEEeec
Q 022019 55 TSSIPN-NFLKGIKWSPDGSSFLTSSE---DKTLRIFSLPE--NGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWF 128 (304)
Q Consensus 55 ~~~~h~-~~V~~i~~s~~~~~l~s~~~---dg~v~vwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 128 (304)
.+..|. ..|..++|+|| +.+++++. +....+|.+.. ...... ......+...+|
T Consensus 58 ~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~~------------------l~~~~~~~~~~~- 117 (582)
T 3o4h_A 58 KLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQR------------------LEAVKPMRILSG- 117 (582)
T ss_dssp ECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCEE------------------CTTSCSBEEEEE-
T ss_pred eeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCcccc------------------ccCCCCceeeee-
Confidence 344455 68999999999 77777664 45567766543 111100 001112223344
Q ss_pred CccceeCCCc--cEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EEcC----CeEEEEEc
Q 022019 129 PHMSASDPTS--CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AGYN----KSVRVFDV 201 (304)
Q Consensus 129 ~~~~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~~d----~~i~v~d~ 201 (304)
+|++ ..+++++.+ .+.+||+.+++........ . .+++|+|||+.|+ ++.+ +.|++||+
T Consensus 118 ------s~dg~~~~~~s~~~~-~~~l~d~~~g~~~~l~~~~-------~-~~~~~spDG~~la~~~~~~~~~~~i~~~d~ 182 (582)
T 3o4h_A 118 ------VDTGEAVVFTGATED-RVALYALDGGGLRELARLP-------G-FGFVSDIRGDLIAGLGFFGGGRVSLFTSNL 182 (582)
T ss_dssp ------EECSSCEEEEEECSS-CEEEEEEETTEEEEEEEES-------S-CEEEEEEETTEEEEEEEEETTEEEEEEEET
T ss_pred ------CCCCCeEEEEecCCC-CceEEEccCCcEEEeecCC-------C-ceEEECCCCCEEEEEEEcCCCCeEEEEEcC
Confidence 4455 345555544 4569999988765544321 1 6899999999999 4455 67999998
Q ss_pred CCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCC--eEEEEecCCceEeEEeccccCCeEEEE-------
Q 022019 202 HRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQ--TSAIYREDNMELLYVLHGQEGGVTHVQ------- 272 (304)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~v~~~~------- 272 (304)
.++.. ..+ ..+...+..++|+| +++.|+++..++ .|++||+.++++. .+.+|...+..+.
T Consensus 183 ~~g~~-----~~l----~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 251 (582)
T 3o4h_A 183 SSGGL-----RVF----DSGEGSFSSASISP-GMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWL 251 (582)
T ss_dssp TTCCC-----EEE----CCSSCEEEEEEECT-TSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEE
T ss_pred CCCCc-----eEe----ecCCCccccceECC-CCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccce
Confidence 76421 122 44566789999999 677788888888 8999999988877 7777777676677
Q ss_pred -ECCCCcEEEEeeccCCeEEEEec
Q 022019 273 -FSRDGNYLYTGGRKDPYILCWDL 295 (304)
Q Consensus 273 -~~~~~~~l~~~~~~d~~i~vwd~ 295 (304)
|+|||..+++++ .|+.+++|++
T Consensus 252 ~~spdg~~~~~~~-~~g~~~l~~~ 274 (582)
T 3o4h_A 252 GYLPDGRLAVVAR-REGRSAVFID 274 (582)
T ss_dssp EECTTSCEEEEEE-ETTEEEEEET
T ss_pred eEcCCCcEEEEEE-cCCcEEEEEE
Confidence 999998888888 9999999999
No 165
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.78 E-value=1.4e-15 Score=119.52 Aligned_cols=228 Identities=12% Similarity=0.195 Sum_probs=146.4
Q ss_pred cCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCcccccc-----------ccccc-cCCccce---------EEE
Q 022019 57 SIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNA-----------CSLAK-DQDSYEA---------SLV 115 (304)
Q Consensus 57 ~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~-----------~~~~~-~~~~~~~---------~~~ 115 (304)
.+|-..+.+++++++|.++++...++.|.+||.... ....... ..... ....... ...
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~-~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~ 104 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGR-FKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQI 104 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSC-EEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEE
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCCCc-EEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEE
Confidence 456678999999999998888888999999997732 2211110 00000 0000000 000
Q ss_pred ee-cCCeEEEEe----ecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEE
Q 022019 116 VT-EGESVYDFC----WFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA 190 (304)
Q Consensus 116 ~~-~~~~v~~~~----~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~ 190 (304)
.. .+..+..+. -.|..++++++|+++++...++.|.+||.. ++....+.... ....+.+++++|+|+++++
T Consensus 105 ~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~---~~~~p~~i~~~~~g~l~v~ 180 (286)
T 1q7f_A 105 YNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSK---HLEFPNGVVVNDKQEIFIS 180 (286)
T ss_dssp ECTTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTT---TCSSEEEEEECSSSEEEEE
T ss_pred ECCCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCC---ccCCcEEEEECCCCCEEEE
Confidence 00 111111111 134556788999988888788999999964 55544443211 1225789999999997776
Q ss_pred E-cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCC-eEEEEecCCceEeEEeccccC--
Q 022019 191 G-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQ-TSAIYREDNMELLYVLHGQEG-- 266 (304)
Q Consensus 191 ~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg-~i~i~d~~~~~~~~~~~~~~~-- 266 (304)
. .++.|++||... . .+..+.. .++...+..++++| ++.++++...++ .|.+||. .++.+..+..+..
T Consensus 181 ~~~~~~i~~~~~~g--~---~~~~~~~--~g~~~~p~~i~~d~-~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~ 251 (286)
T 1q7f_A 181 DNRAHCVKVFNYEG--Q---YLRQIGG--EGITNYPIGVGINS-NGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHA 251 (286)
T ss_dssp EGGGTEEEEEETTC--C---EEEEESC--TTTSCSEEEEEECT-TCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCS
T ss_pred ECCCCEEEEEcCCC--C---EEEEEcc--CCccCCCcEEEECC-CCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCC
Confidence 6 789999999753 1 1122211 22234578999999 667888777776 9999996 5666666654433
Q ss_pred CeEEEEECCCCcEEEEeeccCCeEEEEeccccee
Q 022019 267 GVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQ 300 (304)
Q Consensus 267 ~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~ 300 (304)
.+.+++++|+|+++++ + .|++|++|++.....
T Consensus 252 ~~~~i~~~~~g~l~vs-~-~~~~v~v~~~~~~~p 283 (286)
T 1q7f_A 252 QCFDVALMDDGSVVLA-S-KDYRLYIYRYVQLAP 283 (286)
T ss_dssp CEEEEEEETTTEEEEE-E-TTTEEEEEECSCCCC
T ss_pred cceeEEECCCCcEEEE-C-CCCeEEEEEcccccc
Confidence 4789999999986665 6 799999999876543
No 166
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.75 E-value=1.7e-16 Score=130.26 Aligned_cols=206 Identities=13% Similarity=0.074 Sum_probs=135.2
Q ss_pred eecCCCCceeE-----EEEcCCCCeEEEecC-CCe--EEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEe
Q 022019 55 TSSIPNNFLKG-----IKWSPDGSSFLTSSE-DKT--LRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFC 126 (304)
Q Consensus 55 ~~~~h~~~V~~-----i~~s~~~~~l~s~~~-dg~--v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 126 (304)
.+..|...... .+|+|||++|+.++. +|. |.+||+.+++.... ...+...+...
T Consensus 25 ~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~l-----------------t~~~~~~~~~~- 86 (388)
T 3pe7_A 25 RLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQL-----------------TEGRGDNTFGG- 86 (388)
T ss_dssp ECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEEC-----------------CCSSCBCSSSC-
T ss_pred EecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEe-----------------eeCCCCCccce-
Confidence 55566655555 899999999998887 674 77788875532111 01111111122
Q ss_pred ecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEE--EEECCCCcEEEEE-------------
Q 022019 127 WFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFS--VAFNPTGTKIFAG------------- 191 (304)
Q Consensus 127 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~--i~~~~~~~~l~~~------------- 191 (304)
.++|+|+.|+.++.++.|++||+.+++.......+.. .+.. ..++|+++.+++.
T Consensus 87 ------~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~-----~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~ 155 (388)
T 3pe7_A 87 ------FLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAE-----WVGYGTWVANSDCTKLVGIEIRREDWVPLTDW 155 (388)
T ss_dssp ------EECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTT-----EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSH
T ss_pred ------EEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhh-----cccccceeECCCCCeeccccccCccccccccc
Confidence 3589999999999999999999999887766654432 2322 3458999988731
Q ss_pred ----------cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeec-CCCcEEEEEecC------CeEEEEecCC
Q 022019 192 ----------YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSP-THTGMLAIGSYS------QTSAIYREDN 254 (304)
Q Consensus 192 ----------~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~l~~~~~d------g~i~i~d~~~ 254 (304)
.+..|++||+.++. . ..+ ..+...+..++|+| ++. .|+.++.+ ..|.++|...
T Consensus 156 ~~~~~~~~~~~~~~l~~~d~~~g~--~---~~l----~~~~~~~~~~~~sp~dg~-~l~~~~~~~~~~~~~~l~~~d~~~ 225 (388)
T 3pe7_A 156 KKFHEFYFTKPCCRLMRVDLKTGE--S---TVI----LQENQWLGHPIYRPYDDS-TVAFCHEGPHDLVDARMWLINEDG 225 (388)
T ss_dssp HHHHHHGGGCCCEEEEEEETTTCC--E---EEE----EEESSCEEEEEEETTEEE-EEEEEECSCTTTSSCSEEEEETTS
T ss_pred chhhhhhccCCcceEEEEECCCCc--e---EEe----ecCCccccccEECCCCCC-EEEEEEecCCCCCcceEEEEeCCC
Confidence 33679999987642 1 111 12334578999999 655 55544442 3788888765
Q ss_pred ceEeEEecccc--CCeEEEEECCCCcEEEEeeccCC----eEEEEeccccee
Q 022019 255 MELLYVLHGQE--GGVTHVQFSRDGNYLYTGGRKDP----YILCWDLRKAVQ 300 (304)
Q Consensus 255 ~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~~d~----~i~vwd~~~~~~ 300 (304)
+.. ..+..+. ..+..+.|+|||+.|+..+..++ .|++||+.+++.
T Consensus 226 ~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~ 276 (388)
T 3pe7_A 226 TNM-RKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLEN 276 (388)
T ss_dssp CCC-EESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCE
T ss_pred Cce-EEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCce
Confidence 543 3344343 35788999999998866552322 399999998763
No 167
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.73 E-value=1.3e-15 Score=124.90 Aligned_cols=209 Identities=11% Similarity=0.096 Sum_probs=129.6
Q ss_pred ecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeC
Q 022019 56 SSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASD 135 (304)
Q Consensus 56 ~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 135 (304)
..+|...+..+.|+|||+.|+.++.++.|.+||+.+++... +...+...+....| .++
T Consensus 76 t~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~-----------------~~~~~~~~~~~~~~-----~~~ 133 (388)
T 3pe7_A 76 TEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENV-----------------VYQVPAEWVGYGTW-----VAN 133 (388)
T ss_dssp CCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEE-----------------EEECCTTEEEEEEE-----EEC
T ss_pred eeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCccee-----------------eeechhhcccccce-----eEC
Confidence 34566666678999999999999999999999998654211 11112222322333 237
Q ss_pred CCccEEEEE----------------------eCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECC-CCcEEE-EE
Q 022019 136 PTSCVFAST----------------------TRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNP-TGTKIF-AG 191 (304)
Q Consensus 136 ~~~~~l~~~----------------------~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~-~~ 191 (304)
+++.+++.. ..+..|++||+.+++....... .. .+..+.|+| +|+.|+ +.
T Consensus 134 ~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~-~~-----~~~~~~~sp~dg~~l~~~~ 207 (388)
T 3pe7_A 134 SDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQE-NQ-----WLGHPIYRPYDDSTVAFCH 207 (388)
T ss_dssp TTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEE-SS-----CEEEEEEETTEEEEEEEEE
T ss_pred CCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecC-Cc-----cccccEECCCCCCEEEEEE
Confidence 788877643 2346799999998876544332 21 678999999 999888 44
Q ss_pred c------CCeEEEEEcCCCCccceeeeeeeccccccc-cceeEEEeecCCCcEEEEEecCC----eEEEEecCCceE--e
Q 022019 192 Y------NKSVRVFDVHRPGRDFEKYSTLKGNKEGQA-GIMSAIAFSPTHTGMLAIGSYSQ----TSAIYREDNMEL--L 258 (304)
Q Consensus 192 ~------d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~p~~~~~l~~~~~dg----~i~i~d~~~~~~--~ 258 (304)
. ...|.++|+.... . ..+. .... ..+..++|+|++..+++++..++ .|++||+.+++. +
T Consensus 208 ~~~~~~~~~~l~~~d~~~~~--~---~~l~---~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l 279 (388)
T 3pe7_A 208 EGPHDLVDARMWLINEDGTN--M---RKVK---THAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQL 279 (388)
T ss_dssp CSCTTTSSCSEEEEETTSCC--C---EESC---CCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEE
T ss_pred ecCCCCCcceEEEEeCCCCc--e---EEee---eCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEE
Confidence 3 2367788875421 1 1111 1111 34778899995554545444433 399999988763 3
Q ss_pred EEeccccCC---eEEEEECCCCcEEEEee--------ccCCeEEEEeccccee
Q 022019 259 YVLHGQEGG---VTHVQFSRDGNYLYTGG--------RKDPYILCWDLRKAVQ 300 (304)
Q Consensus 259 ~~~~~~~~~---v~~~~~~~~~~~l~~~~--------~~d~~i~vwd~~~~~~ 300 (304)
..+.++... ...+.|+|||+.|+... ..+..|++||+.+++.
T Consensus 280 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 332 (388)
T 3pe7_A 280 TSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ 332 (388)
T ss_dssp EEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEE
T ss_pred EcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce
Confidence 334331111 11237999999887542 1567999999988754
No 168
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.73 E-value=1.9e-16 Score=140.58 Aligned_cols=229 Identities=14% Similarity=0.077 Sum_probs=140.5
Q ss_pred ceeeecCCCcccccccceeeeecCCCCc-----eeEEEEcCCCCeEEEecCC---------CeEEEeeCCCCCCcccccc
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNF-----LKGIKWSPDGSSFLTSSED---------KTLRIFSLPENGISYDVNA 100 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~-----V~~i~~s~~~~~l~s~~~d---------g~v~vwd~~~~~~~~~~~~ 100 (304)
.+..|++....... .+.+|... ...+.|||||++|+.++.+ +.+.+||+.+++... +
T Consensus 37 ~i~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~-l-- 107 (740)
T 4a5s_A 37 NILVFNAEYGNSSV------FLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLIT-E-- 107 (740)
T ss_dssp EEEEEETTTCCEEE------EECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC-S--
T ss_pred cEEEEECCCCceEE------EEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEE-c--
Confidence 35566766554332 34455432 3458999999999998876 566799998764321 0
Q ss_pred ccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccc-----cc--
Q 022019 101 CSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVD-----EI-- 173 (304)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~-----~~-- 173 (304)
..+...+...+| ||||+.||.+. ++.|++|++.+++..+ +....... ..
T Consensus 108 ---------------~~~~~~~~~~~~-------SPdG~~la~~~-~~~i~~~~~~~~~~~~-lt~~g~~~~~~~g~~~~ 163 (740)
T 4a5s_A 108 ---------------ERIPNNTQWVTW-------SPVGHKLAYVW-NNDIYVKIEPNLPSYR-ITWTGKEDIIYNGITDW 163 (740)
T ss_dssp ---------------SCCCTTEEEEEE-------CSSTTCEEEEE-TTEEEEESSTTSCCEE-CCSCCBTTTEEESBCCH
T ss_pred ---------------ccCCCcceeeEE-------CCCCCEEEEEE-CCeEEEEECCCCceEE-EcCCCCccceecCcccc
Confidence 112245666666 88999999885 6789999998877543 22111100 00
Q ss_pred -------cceEEEEECCCCcEEE-EE-cCC-----------------------------------eEEEEEcCC---CCc
Q 022019 174 -------TAAFSVAFNPTGTKIF-AG-YNK-----------------------------------SVRVFDVHR---PGR 206 (304)
Q Consensus 174 -------~~v~~i~~~~~~~~l~-~~-~d~-----------------------------------~i~v~d~~~---~~~ 206 (304)
.....+.|||||+.|+ +. .++ .|++||+.. +..
T Consensus 164 v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~ 243 (740)
T 4a5s_A 164 VYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTN 243 (740)
T ss_dssp HHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSC
T ss_pred cccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCc
Confidence 1223589999999998 43 333 356666654 311
Q ss_pred cceeeeeeec--cccccccceeEEEeecCCCcEEEEEec----CCeEEEEecCCce----Ee--EEe--ccccCCeE---
Q 022019 207 DFEKYSTLKG--NKEGQAGIMSAIAFSPTHTGMLAIGSY----SQTSAIYREDNME----LL--YVL--HGQEGGVT--- 269 (304)
Q Consensus 207 ~~~~~~~~~~--~~~~~~~~v~~~~~~p~~~~~l~~~~~----dg~i~i~d~~~~~----~~--~~~--~~~~~~v~--- 269 (304)
.. ...+.. ...++...+..++|+| ++++++.... +..|++||+.+++ +. ..+ .+|...|.
T Consensus 244 -~~-~~~l~~~~~~~~~~~~~~~~~wsp-dg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~ 320 (740)
T 4a5s_A 244 -AT-SIQITAPASMLIGDHYLCDVTWAT-QERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFR 320 (740)
T ss_dssp -CC-EEEECCCHHHHTSCEEEEEEEEEE-TTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSS
T ss_pred -ce-EEEecCCccCCCCCeEEEEEEEeC-CCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCc
Confidence 00 011110 0013566789999999 5665555433 2369999998876 22 222 34555554
Q ss_pred --EEEECCCCcEEE-EeeccCC--eEEEEecccce
Q 022019 270 --HVQFSRDGNYLY-TGGRKDP--YILCWDLRKAV 299 (304)
Q Consensus 270 --~~~~~~~~~~l~-~~~~~d~--~i~vwd~~~~~ 299 (304)
.+.|+|||+.|+ ..+..+| .|.+||+.+++
T Consensus 321 ~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~ 355 (740)
T 4a5s_A 321 PSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKD 355 (740)
T ss_dssp CCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSS
T ss_pred CCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCc
Confidence 789999999877 6653444 68888887654
No 169
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.72 E-value=1.8e-14 Score=115.52 Aligned_cols=216 Identities=14% Similarity=0.138 Sum_probs=142.9
Q ss_pred CCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCC-CccccccccccccCCccceEEEeecCCeEEEEeecCccceeCC
Q 022019 58 IPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENG-ISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDP 136 (304)
Q Consensus 58 ~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 136 (304)
++.....+|+++|+|+++++...++.|++|+..... ....+..... .... ..+-. .|..++++|
T Consensus 88 ~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~-~g~~-------~~~~~-------~P~~ia~~~ 152 (329)
T 3fvz_A 88 NLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQ-PGSD-------QNHFC-------QPTDVAVEP 152 (329)
T ss_dssp TTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTB-CCCS-------TTCCS-------SEEEEEECT
T ss_pred CccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCC-CCCC-------ccccC-------CCcEEEEeC
Confidence 455678999999999988888889999999986432 1111100000 0000 00011 233445588
Q ss_pred -CccEEEEEe-CCCCEEEEEcCCCeeeEEeeccccc-----ccccceEEEEECCC-CcEEEEE-cCCeEEEEEcCCCCcc
Q 022019 137 -TSCVFASTT-RDHPIHLWDATTGLLRCTYRAYDAV-----DEITAAFSVAFNPT-GTKIFAG-YNKSVRVFDVHRPGRD 207 (304)
Q Consensus 137 -~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~-----~~~~~v~~i~~~~~-~~~l~~~-~d~~i~v~d~~~~~~~ 207 (304)
++.++++.+ .++.|++|+ .+++....+...... .....+.+++++|+ +.++++. .++.|++||..++ .
T Consensus 153 ~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G-~- 229 (329)
T 3fvz_A 153 STGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTK-E- 229 (329)
T ss_dssp TTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTC-C-
T ss_pred CCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCC-c-
Confidence 788888886 689999999 556666655432210 12224789999998 5655565 8899999999743 1
Q ss_pred ceeeeeeeccccccccceeEEEeecCCCcEEEEEe-------cCCeEEEEecCCceEeEEec---cccCCeEEEEECCCC
Q 022019 208 FEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS-------YSQTSAIYREDNMELLYVLH---GQEGGVTHVQFSRDG 277 (304)
Q Consensus 208 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~-------~dg~i~i~d~~~~~~~~~~~---~~~~~v~~~~~~~~~ 277 (304)
....+.. ..+...+.+++|+| +..+.+.+ .+..|++||..+++.+..+. ++......++++|+|
T Consensus 230 --~~~~~~~--~~~~~~~~~~~~~p--g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG 303 (329)
T 3fvz_A 230 --FVREIKH--ASFGRNVFAISYIP--GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDG 303 (329)
T ss_dssp --EEEEECC--TTTTTCEEEEEEET--TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTS
T ss_pred --EEEEEec--cccCCCcceeeecC--CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCC
Confidence 1122211 23445678899998 33333332 24489999999999888873 566778999999999
Q ss_pred cEEEEeeccCCeEEEEecccc
Q 022019 278 NYLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 278 ~~l~~~~~~d~~i~vwd~~~~ 298 (304)
..+++.. .++.|++|++...
T Consensus 304 ~lyvad~-~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 304 TVYIGDA-HTNTVWKFTLTEK 323 (329)
T ss_dssp EEEEEES-SSCCEEEEEEEEC
T ss_pred CEEEEEC-CCCEEEEEeCCcc
Confidence 7666666 8999999998653
No 170
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.71 E-value=4.8e-15 Score=118.88 Aligned_cols=216 Identities=12% Similarity=0.148 Sum_probs=140.8
Q ss_pred CCceeEEEEcCCCCeEEEecCCC------------------------eEEEeeCCCCCCccccccccccccCCccceEEE
Q 022019 60 NNFLKGIKWSPDGSSFLTSSEDK------------------------TLRIFSLPENGISYDVNACSLAKDQDSYEASLV 115 (304)
Q Consensus 60 ~~~V~~i~~s~~~~~l~s~~~dg------------------------~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (304)
-+.|.+|+++|+|+++++...++ +|.+||..++........
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~--------------- 87 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGK--------------- 87 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECT---------------
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCC---------------
Confidence 35599999999999998887773 577777654433110000
Q ss_pred eecCCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCe-eeEEeecccc----cccccceEEEEECC-CCcEEE
Q 022019 116 VTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGL-LRCTYRAYDA----VDEITAAFSVAFNP-TGTKIF 189 (304)
Q Consensus 116 ~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~----~~~~~~v~~i~~~~-~~~~l~ 189 (304)
..-. .|..++++++|+++++...++.|++||..... .+..+..... ..+...+.+++++| ++.+++
T Consensus 88 -~~~~-------~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv 159 (329)
T 3fvz_A 88 -NLFY-------LPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFV 159 (329)
T ss_dssp -TTCS-------SEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEE
T ss_pred -CccC-------CceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEE
Confidence 0001 24445568899988888889999999976442 3333321110 11223678999999 787777
Q ss_pred EE--cCCeEEEEEcCCCCccceeeeeeecc---ccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEec--
Q 022019 190 AG--YNKSVRVFDVHRPGRDFEKYSTLKGN---KEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH-- 262 (304)
Q Consensus 190 ~~--~d~~i~v~d~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-- 262 (304)
+. .++.|++||... .....+...... ..++...+..++++|+++.++++...++.|++||..+++.+..+.
T Consensus 160 ~d~~~~~~I~~~~~~g--~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~ 237 (329)
T 3fvz_A 160 SDGYCNSRIVQFSPSG--KFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHA 237 (329)
T ss_dssp EECSSCCEEEEECTTS--CEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCT
T ss_pred EeCCCCCeEEEEcCCC--CEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEecc
Confidence 65 489999999532 211111110000 012334478999999558888888889999999998888888874
Q ss_pred cccCCeEEEEECCCCcEEEEee------ccCCeEEEEecccceee
Q 022019 263 GQEGGVTHVQFSRDGNYLYTGG------RKDPYILCWDLRKAVQV 301 (304)
Q Consensus 263 ~~~~~v~~~~~~~~~~~l~~~~------~~d~~i~vwd~~~~~~~ 301 (304)
.+...+.+++|+| +..+.+.+ ..+..|++|++.+++.+
T Consensus 238 ~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~ 281 (329)
T 3fvz_A 238 SFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEII 281 (329)
T ss_dssp TTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEE
T ss_pred ccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEE
Confidence 4556789999999 43333332 14558999999887654
No 171
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.70 E-value=3.6e-15 Score=130.92 Aligned_cols=200 Identities=12% Similarity=0.008 Sum_probs=128.0
Q ss_pred CCCceeEEEEcCCCCeEEEecCC----------CeEEEeeCCC------CCCccccccccccccCCccceEEEe-ecCCe
Q 022019 59 PNNFLKGIKWSPDGSSFLTSSED----------KTLRIFSLPE------NGISYDVNACSLAKDQDSYEASLVV-TEGES 121 (304)
Q Consensus 59 h~~~V~~i~~s~~~~~l~s~~~d----------g~v~vwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 121 (304)
|...+.+++|+|||+.|++++.| ..|.+||+.+ +... ... .+...
T Consensus 128 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~------------------~l~~~~~~~ 189 (662)
T 3azo_A 128 GGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR------------------ELSDDAHRF 189 (662)
T ss_dssp TCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE------------------ESSCSCSSE
T ss_pred CCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee------------------EEEecCCCc
Confidence 67789999999999999988876 5899999875 2211 011 11233
Q ss_pred EEEEeecCccceeCCCccEEEEEeCC--------CCEEEEEcC-CC---eeeEEeecccccccccceEEEEECCCCcEEE
Q 022019 122 VYDFCWFPHMSASDPTSCVFASTTRD--------HPIHLWDAT-TG---LLRCTYRAYDAVDEITAAFSVAFNPTGTKIF 189 (304)
Q Consensus 122 v~~~~~~~~~~~~~~~~~~l~~~~~d--------g~i~i~d~~-~~---~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~ 189 (304)
+..+. ++|||++|+.++.+ ..|++||+. ++ +.......+. ..+..+.|+|||++++
T Consensus 190 ~~~~~-------~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~-----~~~~~~~~spdg~l~~ 257 (662)
T 3azo_A 190 VTGPR-------LSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPE-----EAIAQAEWAPDGSLIV 257 (662)
T ss_dssp ECCCE-------ECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETT-----BCEEEEEECTTSCEEE
T ss_pred ccCce-------ECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCC-----ceEcceEECCCCeEEE
Confidence 33444 48999999888755 379999998 56 3333332222 2788999999999666
Q ss_pred EE-cCC--eEEEEEcCCCCccceeeeeeecccccccc--------ceeEEEeecCCCcEEEEEecCCeEEEE--ecCCce
Q 022019 190 AG-YNK--SVRVFDVHRPGRDFEKYSTLKGNKEGQAG--------IMSAIAFSPTHTGMLAIGSYSQTSAIY--REDNME 256 (304)
Q Consensus 190 ~~-~d~--~i~v~d~~~~~~~~~~~~~~~~~~~~~~~--------~v~~~~~~p~~~~~l~~~~~dg~i~i~--d~~~~~ 256 (304)
++ .++ .|++||+..+ ... .+. ..+.. .+..++|+| ++.++++++. +.++|| |+..++
T Consensus 258 ~~~~~~~~~l~~~~~~~~--~~~---~l~---~~~~~~~~p~w~~~~~~~~~~~-~~~~~~~~~~-~~~~l~~~d~~~~~ 327 (662)
T 3azo_A 258 ATDRTGWWNLHRVDPATG--AAT---QLC---RREEEFAGPLWTPGMRWFAPLA-NGLIAVVHGK-GAAVLGILDPESGE 327 (662)
T ss_dssp EECTTSSCEEEEECTTTC--CEE---ESS---CCSSBSSCCCCSTTCCSEEECT-TSCEEEEEBS-SSCEEEEEETTTTE
T ss_pred EECCCCCeEEEEEECCCC--cee---ecc---cccccccCccccccCceEeEeC-CCEEEEEEEc-CccEEEEEECCCCc
Confidence 66 677 5666665432 111 111 11111 146788999 7778999988 998998 555555
Q ss_pred EeEEeccccCCeEEE-EECCCCcEEEEeeccCC--eEEEEeccccee
Q 022019 257 LLYVLHGQEGGVTHV-QFSRDGNYLYTGGRKDP--YILCWDLRKAVQ 300 (304)
Q Consensus 257 ~~~~~~~~~~~v~~~-~~~~~~~~l~~~~~~d~--~i~vwd~~~~~~ 300 (304)
+..+..|...+..+ +++++.-++++++ .+. .|.+||+.+++.
T Consensus 328 -~~~l~~~~~~~~~~~s~~~~~~~~~~~~-~~~~~~i~~~d~~~g~~ 372 (662)
T 3azo_A 328 -LVDAAGPWTEWAATLTVSGTRAVGVAAS-PRTAYEVVELDTVTGRA 372 (662)
T ss_dssp -EEECCSSCCEEEEEEEEETTEEEEEEEE-TTEEEEEEEEETTTCCE
T ss_pred -EEEecCCCCeEEEEEecCCCEEEEEEcC-CCCCCEEEEEECCCCce
Confidence 56777777777777 5543333333334 454 455566666643
No 172
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.69 E-value=1.4e-15 Score=133.41 Aligned_cols=212 Identities=12% Similarity=0.080 Sum_probs=134.2
Q ss_pred eecCCCCcee---------EEEEc--CCCCe-EEEecC-CCeEEEeeCC--C-CCCccccccccccccCCccceEEEeec
Q 022019 55 TSSIPNNFLK---------GIKWS--PDGSS-FLTSSE-DKTLRIFSLP--E-NGISYDVNACSLAKDQDSYEASLVVTE 118 (304)
Q Consensus 55 ~~~~h~~~V~---------~i~~s--~~~~~-l~s~~~-dg~v~vwd~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (304)
.+..|...+. ...|+ |||+. |+.++. +..|.++++. . +.. ..+.... ...+
T Consensus 62 ~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~-~~l~~~~------------~~~~ 128 (662)
T 3azo_A 62 SALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVP-RPLTPVS------------AVGG 128 (662)
T ss_dssp ESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCC-EECSCCC------------CSTT
T ss_pred eeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCC-EeccCCc------------cCCC
Confidence 4556666666 66676 99998 776554 5566666654 1 211 1100000 0002
Q ss_pred CCeEEEEeecCccceeCCCccEEEEEeCC----------CCEEEEEcCC------CeeeEEee-cccccccccceEEEEE
Q 022019 119 GESVYDFCWFPHMSASDPTSCVFASTTRD----------HPIHLWDATT------GLLRCTYR-AYDAVDEITAAFSVAF 181 (304)
Q Consensus 119 ~~~v~~~~~~~~~~~~~~~~~~l~~~~~d----------g~i~i~d~~~------~~~~~~~~-~~~~~~~~~~v~~i~~ 181 (304)
...+..++| +|||+.|++++.+ ..|++||+.+ ++.. .+. ... ..+..++|
T Consensus 129 ~~~~~~~~~-------spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~l~~~~~-----~~~~~~~~ 195 (662)
T 3azo_A 129 GLRWADPVL-------LPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR-ELSDDAH-----RFVTGPRL 195 (662)
T ss_dssp CEEEEEEEE-------ETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE-ESSCSCS-----SEECCCEE
T ss_pred CccccCcEE-------CCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee-EEEecCC-----CcccCceE
Confidence 345566666 8899999998877 5899999987 5543 232 222 26778999
Q ss_pred CCCCcEEE-EEcC--------CeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCC--eEEEE
Q 022019 182 NPTGTKIF-AGYN--------KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQ--TSAIY 250 (304)
Q Consensus 182 ~~~~~~l~-~~~d--------~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg--~i~i~ 250 (304)
+|||+.|+ ++.+ ..|++||+...+. ......+. .++...+..+.|+| ++++++++..++ .|.+|
T Consensus 196 SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~-~~~~~~l~---~~~~~~~~~~~~sp-dg~l~~~~~~~~~~~l~~~ 270 (662)
T 3azo_A 196 SPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGR-FADTRTLL---GGPEEAIAQAEWAP-DGSLIVATDRTGWWNLHRV 270 (662)
T ss_dssp CTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSC-EEEEEEEE---EETTBCEEEEEECT-TSCEEEEECTTSSCEEEEE
T ss_pred CCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCc-ccccEEeC---CCCCceEcceEECC-CCeEEEEECCCCCeEEEEE
Confidence 99999998 4444 3799999973221 00111111 23356688999999 555888888888 67777
Q ss_pred ecCCceEeEEeccccCC--------eEEEEECCCCcEEEEeeccCCeEEEE--ecccce
Q 022019 251 REDNMELLYVLHGQEGG--------VTHVQFSRDGNYLYTGGRKDPYILCW--DLRKAV 299 (304)
Q Consensus 251 d~~~~~~~~~~~~~~~~--------v~~~~~~~~~~~l~~~~~~d~~i~vw--d~~~~~ 299 (304)
|+.+++.......+... +..++|+|++++++++. . +.++|| |+.+++
T Consensus 271 ~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~-~-~~~~l~~~d~~~~~ 327 (662)
T 3azo_A 271 DPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHG-K-GAAVLGILDPESGE 327 (662)
T ss_dssp CTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEB-S-SSCEEEEEETTTTE
T ss_pred ECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEE-c-CccEEEEEECCCCc
Confidence 77666654433333222 56789999999999998 7 999999 544443
No 173
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.69 E-value=2.3e-13 Score=109.25 Aligned_cols=205 Identities=13% Similarity=0.094 Sum_probs=136.9
Q ss_pred eeecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccce
Q 022019 54 RTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSA 133 (304)
Q Consensus 54 ~~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 133 (304)
..+..+...+.+++|+|+|++++++..++.|.+||..++.... +.......+..+++
T Consensus 38 ~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~-----------------~~~~~~~~~~~i~~------ 94 (333)
T 2dg1_A 38 LEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKR-----------------PFVSHKANPAAIKI------ 94 (333)
T ss_dssp EEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEE-----------------EEECSSSSEEEEEE------
T ss_pred EEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEE-----------------EeeCCCCCcceEEE------
Confidence 3455677778999999999988888889999999987553211 11122345666666
Q ss_pred eCCCccEEEEEeCC----CCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEc-------CCeEEEEEcC
Q 022019 134 SDPTSCVFASTTRD----HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGY-------NKSVRVFDVH 202 (304)
Q Consensus 134 ~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-------d~~i~v~d~~ 202 (304)
+++++++++...+ +.|.+||..++.....+.... ....+.++.++|+|+++++.. .+.|..+|..
T Consensus 95 -~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~---~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~ 170 (333)
T 2dg1_A 95 -HKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLS---TAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPD 170 (333)
T ss_dssp -CTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSS---SCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTT
T ss_pred -CCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCc---cCCcccceEECCCCCEEEEeccccccCCCceEEEEeCC
Confidence 7789888877766 689999988776543332111 123688999999998887654 2455555544
Q ss_pred CCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCC-ceEeE--------EeccccCCeEEEEE
Q 022019 203 RPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN-MELLY--------VLHGQEGGVTHVQF 273 (304)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~-~~~~~--------~~~~~~~~v~~~~~ 273 (304)
. .....+ . .....+..++|+|++..++++.+.++.|.+||+.. +..+. .+.++ ..+..+++
T Consensus 171 ~--~~~~~~---~----~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~ 240 (333)
T 2dg1_A 171 F--RTVTPI---I----QNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCI 240 (333)
T ss_dssp S--CCEEEE---E----EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEE
T ss_pred C--CEEEEe---e----cCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEE
Confidence 3 111111 1 11233678999994444556666788999999863 22221 12222 36788999
Q ss_pred CCCCcEEEEeeccCCeEEEEecc
Q 022019 274 SRDGNYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 274 ~~~~~~l~~~~~~d~~i~vwd~~ 296 (304)
+++|.++++.. .++.|.+||..
T Consensus 241 d~~G~l~v~~~-~~~~v~~~d~~ 262 (333)
T 2dg1_A 241 DSDDNLYVAMY-GQGRVLVFNKR 262 (333)
T ss_dssp BTTCCEEEEEE-TTTEEEEECTT
T ss_pred CCCCCEEEEEc-CCCEEEEECCC
Confidence 99999777776 78899999984
No 174
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.67 E-value=1.4e-13 Score=108.68 Aligned_cols=206 Identities=12% Similarity=0.076 Sum_probs=132.5
Q ss_pred eecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
.+..+...+.+++++|+|+++++...++.|.+||..++..... ....... ..-.|..+++
T Consensus 63 ~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~-----------------~~~~~~~---~~~~~~~i~~ 122 (296)
T 3e5z_A 63 PEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESI-----------------ADSFEGK---KLNSPNDVCL 122 (296)
T ss_dssp EEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEE-----------------ECEETTE---ECCCCCCEEE
T ss_pred EEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEE-----------------eeccCCC---CCCCCCCEEE
Confidence 4445777899999999999888877788999999865543110 0000000 0012334556
Q ss_pred CCCccEEEEEeC-----------------CCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeE
Q 022019 135 DPTSCVFASTTR-----------------DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSV 196 (304)
Q Consensus 135 ~~~~~~l~~~~~-----------------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i 196 (304)
+|+|+++++.+. .+.|..++.. ++... +.... .....++|+|+++.+++. .++.|
T Consensus 123 d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~-~~~~~-----~~~~gi~~s~dg~~lv~~~~~~~i 195 (296)
T 3e5z_A 123 APDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSA-PIRDR-----VKPNGLAFLPSGNLLVSDTGDNAT 195 (296)
T ss_dssp CTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEE-EECCC-----SSEEEEEECTTSCEEEEETTTTEE
T ss_pred CCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEE-eecCC-----CCCccEEECCCCCEEEEeCCCCeE
Confidence 889998887321 2345555544 44332 22211 256799999999988655 67899
Q ss_pred EEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEE-CC
Q 022019 197 RVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQF-SR 275 (304)
Q Consensus 197 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~ 275 (304)
++||+...+........+ ..+...+..+++++ ++.++++. ++.|.+||.. ++.+..+..+.. +++++| +|
T Consensus 196 ~~~~~~~~g~~~~~~~~~----~~~~~~p~~i~~d~-~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~ 266 (296)
T 3e5z_A 196 HRYCLNARGETEYQGVHF----TVEPGKTDGLRVDA-GGLIWASA--GDGVHVLTPD-GDELGRVLTPQT-TSNLCFGGP 266 (296)
T ss_dssp EEEEECSSSCEEEEEEEE----CCSSSCCCSEEEBT-TSCEEEEE--TTEEEEECTT-SCEEEEEECSSC-CCEEEEEST
T ss_pred EEEEECCCCcCcCCCeEe----eCCCCCCCeEEECC-CCCEEEEc--CCeEEEECCC-CCEEEEEECCCC-ceeEEEECC
Confidence 999997322210111111 11334567899999 56655554 8899999986 777778877766 899999 68
Q ss_pred CCcEEEEeeccCCeEEEEecccc
Q 022019 276 DGNYLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 276 ~~~~l~~~~~~d~~i~vwd~~~~ 298 (304)
+++.|++++ .+ .+.-++..+.
T Consensus 267 d~~~L~v~t-~~-~l~~~~~~~~ 287 (296)
T 3e5z_A 267 EGRTLYMTV-ST-EFWSIETNVR 287 (296)
T ss_dssp TSCEEEEEE-TT-EEEEEECSCC
T ss_pred CCCEEEEEc-CC-eEEEEEcccc
Confidence 999999888 55 4545555444
No 175
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.67 E-value=1.7e-14 Score=127.50 Aligned_cols=205 Identities=12% Similarity=-0.024 Sum_probs=131.5
Q ss_pred CCCCceeEEEEcCCCCeEEEecCCC-----eEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccc
Q 022019 58 IPNNFLKGIKWSPDGSSFLTSSEDK-----TLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMS 132 (304)
Q Consensus 58 ~h~~~V~~i~~s~~~~~l~s~~~dg-----~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 132 (304)
+|...+..++|||||++||.+..++ .|++||+.+++... ..... ..+..++|
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~-----------------~~~~~-~~~~~~~w----- 178 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELP-----------------DVLER-VKFSCMAW----- 178 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEE-----------------EEEEE-ECSCCEEE-----
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCc-----------------ccccC-cccceEEE-----
Confidence 4555789999999999998765433 89999998664311 01111 11334445
Q ss_pred eeCCCccEEEEEeCCCC----------------EEEEEcCCCeee--EEeecccccccccceEEEEECCCCcEEEE-Ec-
Q 022019 133 ASDPTSCVFASTTRDHP----------------IHLWDATTGLLR--CTYRAYDAVDEITAAFSVAFNPTGTKIFA-GY- 192 (304)
Q Consensus 133 ~~~~~~~~l~~~~~dg~----------------i~i~d~~~~~~~--~~~~~~~~~~~~~~v~~i~~~~~~~~l~~-~~- 192 (304)
+|||+.|+.++.++. |++|++.+++.. ..+... .+...+.++.|+|||++|+. +.
T Consensus 179 --spDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~---~~~~~~~~~~~SpDg~~l~~~~~~ 253 (710)
T 2xdw_A 179 --THDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFP---DEPKWMGGAELSDDGRYVLLSIRE 253 (710)
T ss_dssp --CTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCT---TCTTCEEEEEECTTSCEEEEEEEC
T ss_pred --EeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccC---CCCeEEEEEEEcCCCCEEEEEEEc
Confidence 889999999988766 999999877632 222221 11225678999999999883 33
Q ss_pred ----CCeEEEEEcCC------CCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecC---CeEEEEecCCceE--
Q 022019 193 ----NKSVRVFDVHR------PGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS---QTSAIYREDNMEL-- 257 (304)
Q Consensus 193 ----d~~i~v~d~~~------~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d---g~i~i~d~~~~~~-- 257 (304)
+..|++||+.. +.... ..+. .+...+.. .|+|+++.+++.+..+ +.|.+||+.++..
T Consensus 254 ~~~~~~~l~~~d~~~~~~~~~~~~~~---~~l~----~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~ 325 (710)
T 2xdw_A 254 GCDPVNRLWYCDLQQESNGITGILKW---VKLI----DNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESK 325 (710)
T ss_dssp SSSSCCEEEEEEGGGSSSSSCSSCCC---EEEE----CSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGG
T ss_pred cCCCccEEEEEECcccccccCCccce---EEee----CCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCccc
Confidence 56899999975 21112 2221 12222333 4788555555554433 3699999987642
Q ss_pred eEEeccccC--CeEEEEECCCCcEEEEeeccCCe--EEEEecccce
Q 022019 258 LYVLHGQEG--GVTHVQFSRDGNYLYTGGRKDPY--ILCWDLRKAV 299 (304)
Q Consensus 258 ~~~~~~~~~--~v~~~~~~~~~~~l~~~~~~d~~--i~vwd~~~~~ 299 (304)
...+..|.. .+..+.|++++.++++.. .|+. |.+|++.+|+
T Consensus 326 ~~~l~~~~~~~~~~~~~~~~~~~lv~~~~-~~g~~~l~~~~~~~g~ 370 (710)
T 2xdw_A 326 WKVLVPEHEKDVLEWVACVRSNFLVLCYL-HDVKNTLQLHDLATGA 370 (710)
T ss_dssp CEEEECCCSSCEEEEEEEETTTEEEEEEE-ETTEEEEEEEETTTCC
T ss_pred ceeccCCCCCCeEEEEEEEcCCEEEEEEE-ECCEEEEEEEECCCCC
Confidence 344444443 688899998888888887 8884 5666765664
No 176
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.67 E-value=6.5e-14 Score=110.59 Aligned_cols=202 Identities=12% Similarity=0.136 Sum_probs=135.0
Q ss_pred eeecCCCCceeEEEEcCCCC-eEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccc
Q 022019 54 RTSSIPNNFLKGIKWSPDGS-SFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMS 132 (304)
Q Consensus 54 ~~~~~h~~~V~~i~~s~~~~-~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 132 (304)
..+..+.....+++|+|+|+ +++++..++.|..|+..++ . . ....+...+..+++
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~-~-----------------~~~~~~~~~~~l~~----- 76 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-L-S-----------------PEMHPSHHQNGHCL----- 76 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-E-E-----------------EEESSCSSEEEEEE-----
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-e-E-----------------EEECCCCCcceeeE-----
Confidence 35556677789999999998 7788888999999998754 1 0 11112234555554
Q ss_pred eeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEE----Ec--------------CC
Q 022019 133 ASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA----GY--------------NK 194 (304)
Q Consensus 133 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~----~~--------------d~ 194 (304)
+++|+++++...++.|.+||..+++.......... .....+..++++|+|+++++ |. .+
T Consensus 77 --~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~-~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~ 153 (296)
T 3e5z_A 77 --NKQGHLIACSHGLRRLERQREPGGEWESIADSFEG-KKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGR 153 (296)
T ss_dssp --CTTCCEEEEETTTTEEEEECSTTCCEEEEECEETT-EECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSC
T ss_pred --CCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCC-CCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCc
Confidence 78999888777778999999988875543322111 11225678999999998885 31 23
Q ss_pred eEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecC-CceE---eEEeccccCCeEE
Q 022019 195 SVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED-NMEL---LYVLHGQEGGVTH 270 (304)
Q Consensus 195 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~-~~~~---~~~~~~~~~~v~~ 270 (304)
.|..++.. + .. ..+ ..+......++|+| ++..+++.+.++.|++||+. .++. ...+..+...+.+
T Consensus 154 ~l~~~~~~--g-~~---~~~----~~~~~~~~gi~~s~-dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~ 222 (296)
T 3e5z_A 154 WVFRLAPD--G-TL---SAP----IRDRVKPNGLAFLP-SGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDG 222 (296)
T ss_dssp EEEEECTT--S-CE---EEE----ECCCSSEEEEEECT-TSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCS
T ss_pred EEEEECCC--C-CE---EEe----ecCCCCCccEEECC-CCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCe
Confidence 55555543 1 11 111 12334468899999 55566777788999999986 4443 2333334556778
Q ss_pred EEECCCCcEEEEeeccCCeEEEEecc
Q 022019 271 VQFSRDGNYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 271 ~~~~~~~~~l~~~~~~d~~i~vwd~~ 296 (304)
++++++|++.++. ++.|.+|+..
T Consensus 223 i~~d~~G~l~v~~---~~~v~~~~~~ 245 (296)
T 3e5z_A 223 LRVDAGGLIWASA---GDGVHVLTPD 245 (296)
T ss_dssp EEEBTTSCEEEEE---TTEEEEECTT
T ss_pred EEECCCCCEEEEc---CCeEEEECCC
Confidence 9999999855543 6789999986
No 177
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.66 E-value=6.2e-13 Score=106.71 Aligned_cols=196 Identities=10% Similarity=0.067 Sum_probs=126.3
Q ss_pred CCCCceeEEEEcCCCCeEEEecCC----CeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccce
Q 022019 58 IPNNFLKGIKWSPDGSSFLTSSED----KTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSA 133 (304)
Q Consensus 58 ~h~~~V~~i~~s~~~~~l~s~~~d----g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 133 (304)
.+...+.+++|+|+|+++++...+ +.|.+||..++........ ......+..+.+
T Consensus 84 ~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~---------------~~~~~~~~~i~~------ 142 (333)
T 2dg1_A 84 SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIED---------------LSTAYCIDDMVF------ 142 (333)
T ss_dssp CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECS---------------SSSCCCEEEEEE------
T ss_pred CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEcc---------------CccCCcccceEE------
Confidence 456789999999999988877666 6899999876543211000 001234555555
Q ss_pred eCCCccEEEEEeC------CCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-cCCeEEEEEcCCCC
Q 022019 134 SDPTSCVFASTTR------DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPG 205 (304)
Q Consensus 134 ~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~v~d~~~~~ 205 (304)
+|+|+++++... .+.|..+|..+++........ ..+..++|+|+++.++ +. .++.|.+||+...+
T Consensus 143 -d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~------~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g 215 (333)
T 2dg1_A 143 -DSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNI------SVANGIALSTDEKVLWVTETTANRLHRIALEDDG 215 (333)
T ss_dssp -CTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEE------SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTS
T ss_pred -CCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCC------CcccceEECCCCCEEEEEeCCCCeEEEEEecCCC
Confidence 778888777654 355666666555443322211 1567899999998766 44 67899999996433
Q ss_pred ccceeee-eeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccC------CeEEEEECCCCc
Q 022019 206 RDFEKYS-TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEG------GVTHVQFSRDGN 278 (304)
Q Consensus 206 ~~~~~~~-~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~------~v~~~~~~~~~~ 278 (304)
.....+. .......++ ..+..+++++ ++.++++...++.|.+||. .++.+..+..+.. .+.+++|+|++.
T Consensus 216 ~~~~~~~~~~~~~~~~~-~~~~~i~~d~-~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~ 292 (333)
T 2dg1_A 216 VTIQPFGATIPYYFTGH-EGPDSCCIDS-DDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTN 292 (333)
T ss_dssp SSEEEEEEEEEEECCSS-SEEEEEEEBT-TCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSC
T ss_pred cCcccccceEEEecCCC-CCCCceEECC-CCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCC
Confidence 2222111 111011112 3577899999 6667777777899999998 4666666654432 689999999988
Q ss_pred EEEEee
Q 022019 279 YLYTGG 284 (304)
Q Consensus 279 ~l~~~~ 284 (304)
.|+.++
T Consensus 293 ~L~v~~ 298 (333)
T 2dg1_A 293 QLIICS 298 (333)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 887666
No 178
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.66 E-value=7.7e-14 Score=108.56 Aligned_cols=202 Identities=9% Similarity=0.008 Sum_probs=135.8
Q ss_pred CCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCc
Q 022019 59 PNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS 138 (304)
Q Consensus 59 h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 138 (304)
+...+.+|+++++|+++++.. ++.|.+||......... ..........+ +++++|
T Consensus 65 ~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~-----------------~~~~~~~p~~i-------~~~~~g 119 (270)
T 1rwi_B 65 GLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVL-----------------PFDGLNYPEGL-------AVDTQG 119 (270)
T ss_dssp SCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEEC-----------------CCCSCSSEEEE-------EECTTC
T ss_pred CcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeee-----------------ecCCcCCCcce-------EECCCC
Confidence 345688999999998776666 88999999875432100 00011233444 447788
Q ss_pred cEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeecc
Q 022019 139 CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGN 217 (304)
Q Consensus 139 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~ 217 (304)
+++++...++.|.+|+..+........ . ....+.+++++++|+++++. .++.|.+||...... ...
T Consensus 120 ~l~v~~~~~~~i~~~~~~~~~~~~~~~--~---~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~-----~~~--- 186 (270)
T 1rwi_B 120 AVYVADRGNNRVVKLAAGSKTQTVLPF--T---GLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQ-----VVL--- 186 (270)
T ss_dssp CEEEEEGGGTEEEEECTTCCSCEECCC--C---SCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCE-----EEC---
T ss_pred CEEEEECCCCEEEEEECCCceeEeecc--c---cCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCce-----Eee---
Confidence 888877778889999765443322111 1 11256789999999866666 678999999865311 110
Q ss_pred ccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEeccc
Q 022019 218 KEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 218 ~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~ 297 (304)
.......+.+++++| ++.++++...++.|.+||............+...+.+++++|+|+.+++.. .++.|+++++..
T Consensus 187 ~~~~~~~p~~i~~d~-~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~~v~~~~~~~ 264 (270)
T 1rwi_B 187 PFTDITAPWGIAVDE-AGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADR-GNDRVVKLTSLE 264 (270)
T ss_dssp CCSSCCSEEEEEECT-TCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEG-GGTEEEEECCCG
T ss_pred cccCCCCceEEEECC-CCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEEC-CCCEEEEEcCCC
Confidence 112224578999999 567777777788999999876543332223335689999999998777777 899999999987
Q ss_pred cee
Q 022019 298 AVQ 300 (304)
Q Consensus 298 ~~~ 300 (304)
.+.
T Consensus 265 ~~~ 267 (270)
T 1rwi_B 265 HHH 267 (270)
T ss_dssp GGS
T ss_pred ccc
Confidence 654
No 179
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.65 E-value=4e-13 Score=114.65 Aligned_cols=199 Identities=12% Similarity=0.016 Sum_probs=139.2
Q ss_pred CCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCC
Q 022019 70 PDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHP 149 (304)
Q Consensus 70 ~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~ 149 (304)
|.+.++++...++.|.++|..+++.... +..+..+.. +.++|+|+++++++.|+.
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~------------------i~~g~~p~~-------v~~SpDGr~lyv~~~dg~ 219 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTV------------------LDTGYAVHI-------SRLSASGRYLFVIGRDGK 219 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEE------------------EECSSCEEE-------EEECTTSCEEEEEETTSE
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEE------------------EeCCCCccc-------eEECCCCCEEEEEcCCCe
Confidence 4455777788899999999987644221 112223333 455999999999999999
Q ss_pred EEEEEcC--CCeeeEEeecccccccccceEEEEEC----CCCcEEEEE--cCCeEEEEEcCCCCccceeeeeeecccc--
Q 022019 150 IHLWDAT--TGLLRCTYRAYDAVDEITAAFSVAFN----PTGTKIFAG--YNKSVRVFDVHRPGRDFEKYSTLKGNKE-- 219 (304)
Q Consensus 150 i~i~d~~--~~~~~~~~~~~~~~~~~~~v~~i~~~----~~~~~l~~~--~d~~i~v~d~~~~~~~~~~~~~~~~~~~-- 219 (304)
|.+||+. +++.+..+.... ....++|+ |+|++++++ .++.|.++|..+.. ....+........
T Consensus 220 V~viD~~~~t~~~v~~i~~G~------~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~-~~~~i~~~~~~~~~~ 292 (567)
T 1qks_A 220 VNMIDLWMKEPTTVAEIKIGS------EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLE-PKKIQSTRGMTYDEQ 292 (567)
T ss_dssp EEEEETTSSSCCEEEEEECCS------EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCC-EEEEEECCEECTTTC
T ss_pred EEEEECCCCCCcEeEEEecCC------CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCc-EEEEEeccccccccc
Confidence 9999996 777766665433 45789999 699999954 78999999987632 2221111100001
Q ss_pred -cc-ccceeEEEeecCCCcEEEEEecCCeEEEEecCCce--EeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEec
Q 022019 220 -GQ-AGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME--LLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDL 295 (304)
Q Consensus 220 -~~-~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~ 295 (304)
.| ...+..+..++++..+++....+|.|.++|....+ .+..+. .......+.|+|+|+++++++..++.|.++|+
T Consensus 293 ~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~-~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~ 371 (567)
T 1qks_A 293 EYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEIS-AERFLHDGGLDGSHRYFITAANARNKLVVIDT 371 (567)
T ss_dssp CEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEE-CCSSEEEEEECTTSCEEEEEEGGGTEEEEEET
T ss_pred cccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeee-ccccccCceECCCCCEEEEEeCCCCeEEEEEC
Confidence 01 12577888898667777777778999999987653 233332 34457789999999999887767899999999
Q ss_pred ccceee
Q 022019 296 RKAVQV 301 (304)
Q Consensus 296 ~~~~~~ 301 (304)
.+++.+
T Consensus 372 ~t~kl~ 377 (567)
T 1qks_A 372 KEGKLV 377 (567)
T ss_dssp TTTEEE
T ss_pred CCCcEE
Confidence 998654
No 180
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.64 E-value=1.5e-15 Score=124.83 Aligned_cols=202 Identities=9% Similarity=0.028 Sum_probs=127.1
Q ss_pred ceeEEEEcCCCCeEEEecCC---CeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCc
Q 022019 62 FLKGIKWSPDGSSFLTSSED---KTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS 138 (304)
Q Consensus 62 ~V~~i~~s~~~~~l~s~~~d---g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 138 (304)
.+.+++|+|||++|+.+... ..|.+||+.+++... + ........ ....++|+|
T Consensus 37 ~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~-----------------l-~~~~~~~~------~~~~~spdg 92 (396)
T 3c5m_A 37 YFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQ-----------------L-TEGKGDNT------FGGFISTDE 92 (396)
T ss_dssp CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEE-----------------C-CCSSCBCT------TTCEECTTS
T ss_pred eeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEE-----------------e-ecCCCCcc------ccceECCCC
Confidence 37889999999998776442 368888887543210 0 00001110 012458999
Q ss_pred cEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEE----------------EEECCCCcEEEE------EcCCeE
Q 022019 139 CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFS----------------VAFNPTGTKIFA------GYNKSV 196 (304)
Q Consensus 139 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~----------------i~~~~~~~~l~~------~~d~~i 196 (304)
+.|+.++.++.|++||+.+++.......+..... .-.. +.|+|+++.++. ..+..|
T Consensus 93 ~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~--~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l 170 (396)
T 3c5m_A 93 RAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKG--YGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRL 170 (396)
T ss_dssp SEEEEEETTTEEEEEETTTCCEEEEEECCTTEEE--EEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEE
T ss_pred CEEEEEEcCCcEEEEECCCCCcEEEEecccccCC--CCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceE
Confidence 9999999999999999998876655543322000 0001 356788877662 355689
Q ss_pred EEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecC------CeEEEEecCCceEeEEeccc--cCCe
Q 022019 197 RVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS------QTSAIYREDNMELLYVLHGQ--EGGV 268 (304)
Q Consensus 197 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~--~~~v 268 (304)
++||+..+.. ..+ ..+...+..+.|+|+++..|+..+.+ ..|.+||+..++.. .+..+ ...+
T Consensus 171 ~~~d~~~g~~-----~~~----~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~ 240 (396)
T 3c5m_A 171 IKVDIETGEL-----EVI----HQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHAEGESC 240 (396)
T ss_dssp EEEETTTCCE-----EEE----EEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCCTTEEE
T ss_pred EEEECCCCcE-----Eee----ccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-EeeccCCCccc
Confidence 9999876321 111 12344578899999434445544433 36888998765433 33323 2358
Q ss_pred EEEEECCCCcEEEEeeccC-----CeEEEEeccccee
Q 022019 269 THVQFSRDGNYLYTGGRKD-----PYILCWDLRKAVQ 300 (304)
Q Consensus 269 ~~~~~~~~~~~l~~~~~~d-----~~i~vwd~~~~~~ 300 (304)
..+.|+|||++|+.++ .+ +.|++||+.+++.
T Consensus 241 ~~~~~spdg~~l~~~~-~~~~~~~~~l~~~d~~~g~~ 276 (396)
T 3c5m_A 241 THEFWIPDGSAMAYVS-YFKGQTDRVIYKANPETLEN 276 (396)
T ss_dssp EEEEECTTSSCEEEEE-EETTTCCEEEEEECTTTCCE
T ss_pred cceEECCCCCEEEEEe-cCCCCccceEEEEECCCCCe
Confidence 8899999999887776 33 4599999988753
No 181
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.64 E-value=2.2e-13 Score=106.22 Aligned_cols=194 Identities=12% Similarity=0.079 Sum_probs=137.1
Q ss_pred CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCE
Q 022019 71 DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPI 150 (304)
Q Consensus 71 ~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i 150 (304)
.++.|++++.|+.|.+||.++++........ .... ++.+.++|+|++++ +.++.|
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~----------------~~~~-------~~~~~~~pdG~ilv--s~~~~V 58 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLE----------------KGWE-------CNSVAATKAGEILF--SYSKGA 58 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECC----------------TTCC-------CCEEEECTTSCEEE--ECBSEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCC----------------ccCC-------CcCeEECCCCCEEE--eCCCCE
Confidence 4678999999999999999877554332211 0012 23334588999888 356789
Q ss_pred EEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-c-CCeEEEEEcCCCCccceeeeeeeccccccccceeEE
Q 022019 151 HLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-Y-NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAI 228 (304)
Q Consensus 151 ~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~-d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 228 (304)
+.||. +++.+..+..... ..+.++.+.|+|+++++. . ++.|..+|.. ++....+. +......+......+
T Consensus 59 ~~~d~-~G~~~W~~~~~~~----~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~--Gk~l~~~~-~~~~~~~~~~~~~~v 130 (276)
T 3no2_A 59 KMITR-DGRELWNIAAPAG----CEMQTARILPDGNALVAWCGHPSTILEVNMK--GEVLSKTE-FETGIERPHAQFRQI 130 (276)
T ss_dssp EEECT-TSCEEEEEECCTT----CEEEEEEECTTSCEEEEEESTTEEEEEECTT--SCEEEEEE-ECCSCSSGGGSCSCC
T ss_pred EEECC-CCCEEEEEcCCCC----ccccccEECCCCCEEEEecCCCCEEEEEeCC--CCEEEEEe-ccCCCCcccccccCc
Confidence 99998 7888887776321 267789999999999965 4 6667777652 33222221 111111222345566
Q ss_pred EeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEecccceee
Q 022019 229 AFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 229 ~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
++.+ ++.++++...++.|..||.. ++.+.++... ....++.+.++|..+++++ .+++|..+|..+|+.+
T Consensus 131 ~~~~-~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~-~~~~v~~~d~~tG~~~ 199 (276)
T 3no2_A 131 NKNK-KGNYLVPLFATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACG-DAHCFVQLNLESNRIV 199 (276)
T ss_dssp EECT-TSCEEEEETTTTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECB-TTSEEEEECTTTCCEE
T ss_pred eECC-CCCEEEEecCCCEEEEECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeC-CCCeEEEEeCcCCcEE
Confidence 7888 77799999999999999997 9998888754 4456788899999999888 7889999999988764
No 182
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.64 E-value=9.8e-14 Score=112.02 Aligned_cols=186 Identities=10% Similarity=0.084 Sum_probs=119.1
Q ss_pred CceeEEEEcCCCCeEEEecCC---Ce--EEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeC
Q 022019 61 NFLKGIKWSPDGSSFLTSSED---KT--LRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASD 135 (304)
Q Consensus 61 ~~V~~i~~s~~~~~l~s~~~d---g~--v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 135 (304)
..+..++|+|||++|+.++.+ +. |.+|++.+++. . ....... +..+.| +
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~-----------------~-~l~~~~~-~~~~~w-------s 112 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSS-----------------K-KILEAKN-IRSLEW-------N 112 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEE-----------------E-EEEEESE-EEEEEE-------C
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCce-----------------E-EEEcCCC-ccceeE-------C
Confidence 458889999999999887653 33 66777764321 1 1111222 666766 8
Q ss_pred CCccEEEEEeCC---------------------------CCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEE
Q 022019 136 PTSCVFASTTRD---------------------------HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKI 188 (304)
Q Consensus 136 ~~~~~l~~~~~d---------------------------g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l 188 (304)
|+|+.|+.++.+ ..|++||+.+++....+.. . .+..+.|+|+| ++
T Consensus 113 pdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~------~~~~~~~spdg-~~ 184 (347)
T 2gop_A 113 EDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P------RFSSGIWHRDK-IV 184 (347)
T ss_dssp TTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E------TTCEEEEETTE-EE
T ss_pred CCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C------CcccccCCCCe-EE
Confidence 899888887642 5699999998876344433 1 46689999999 66
Q ss_pred EEE-cC------C-eEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecC--------CeEEEEec
Q 022019 189 FAG-YN------K-SVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS--------QTSAIYRE 252 (304)
Q Consensus 189 ~~~-~d------~-~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d--------g~i~i~d~ 252 (304)
+++ .+ . ...||.+.. +. . ..+. .+ ..+..+ +| ++..|+.++.+ ..|.+||
T Consensus 185 ~~~~~~~~~~~~~~~~~l~~~d~-~~-~---~~l~----~~-~~~~~~--sp-dg~~l~~~~~~~~~~~~~~~~l~~~d- 250 (347)
T 2gop_A 185 VNVPHREIIPQYFKFWDIYIWED-GK-E---EKMF----EK-VSFYAV--DS-DGERILLYGKPEKKYMSEHNKLYIYD- 250 (347)
T ss_dssp EEEECCCSSCCSSCCEEEEEEET-TE-E---EEEE----EE-ESEEEE--EE-CSSCEEEEECCSSSCCCSSCEEEEEC-
T ss_pred EEEecccccccccccccEEEeCC-Cc-e---EEec----cC-cceeeE--CC-CCCEEEEEEccccCCccccceEEEEC-
Confidence 655 33 2 445555442 21 1 1111 11 234443 89 55555555533 4688888
Q ss_pred CCceEeEEeccccCCeEE-EEECCCCcEEEEeeccCCeEEEEecccce
Q 022019 253 DNMELLYVLHGQEGGVTH-VQFSRDGNYLYTGGRKDPYILCWDLRKAV 299 (304)
Q Consensus 253 ~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~~~~d~~i~vwd~~~~~ 299 (304)
+++.......+...+.. +.|+ +| ++++++ .++.++|| +.+++
T Consensus 251 -~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~-~~~~~~l~-~~~g~ 293 (347)
T 2gop_A 251 -GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLF-EEGSVNLY-IWDGE 293 (347)
T ss_dssp -SSCEEESSTTCCSEEEEEEEET-TE-EEEEEE-ETTEEEEE-EESSS
T ss_pred -CCceEeccccCCcccCCccEEc-Cc-EEEEEe-cCCcEEEE-EcCCc
Confidence 55555445566777886 9999 88 888888 89999999 87543
No 183
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.62 E-value=2.7e-14 Score=117.35 Aligned_cols=215 Identities=12% Similarity=0.077 Sum_probs=125.8
Q ss_pred eeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEE
Q 022019 63 LKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFA 142 (304)
Q Consensus 63 V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~ 142 (304)
...+.|+|||++|+.++.++.|.+||+.+++......... ........+.......... .......++|+++.++
T Consensus 83 ~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~---~~~~~g~~l~~~~~~~~~~--~~~~~~~~spdg~~~~ 157 (396)
T 3c5m_A 83 TFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDE---EWKGYGTWVANSDCTKLVG--IEILKRDWQPLTSWEK 157 (396)
T ss_dssp TTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCT---TEEEEEEEEECTTSSEEEE--EEEEGGGCCCCCSHHH
T ss_pred cccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEeccc---ccCCCCCEEEeccCCcccc--ccccccccCCCCccee
Confidence 3448899999999999999999999998654321111000 0000000000000000000 0001135578888776
Q ss_pred EE-----eCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECC-CCcEEE-EEcC------CeEEEEEcCCCCccce
Q 022019 143 ST-----TRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNP-TGTKIF-AGYN------KSVRVFDVHRPGRDFE 209 (304)
Q Consensus 143 ~~-----~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~-~~~d------~~i~v~d~~~~~~~~~ 209 (304)
.+ ..+..|++||+.+++....... . ..+..+.|+| ++..|+ ++.+ ..|.+||+.... .
T Consensus 158 ~~~~~~~~~~~~l~~~d~~~g~~~~~~~~-~-----~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~--~- 228 (396)
T 3c5m_A 158 FAEFYHTNPTCRLIKVDIETGELEVIHQD-T-----AWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN--V- 228 (396)
T ss_dssp HHHHHHTCCCEEEEEEETTTCCEEEEEEE-S-----SCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCC--C-
T ss_pred eeeeccCCCcceEEEEECCCCcEEeeccC-C-----cccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCc--e-
Confidence 54 3567899999998876554432 2 2678999999 788776 4432 468888875421 1
Q ss_pred eeeeeeccccccccceeEEEeecCCCcEEEEEecC-----CeEEEEecCCceEeEEeccccCCeEEEEECC-CCcEEEEe
Q 022019 210 KYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS-----QTSAIYREDNMELLYVLHGQEGGVTHVQFSR-DGNYLYTG 283 (304)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~ 283 (304)
..+.. ......+..++|+| ++..|+.++.+ +.|++||+.+++...... .. ... +.|+| ||++++++
T Consensus 229 --~~l~~--~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~-~~~-~~~s~~dg~~l~~~ 300 (396)
T 3c5m_A 229 --RKIKE--HAEGESCTHEFWIP-DGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV-MP-PCS-HLMSNFDGSLMVGD 300 (396)
T ss_dssp --EESSC--CCTTEEEEEEEECT-TSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE-CC-SEE-EEEECSSSSEEEEE
T ss_pred --eEeec--cCCCccccceEECC-CCCEEEEEecCCCCccceEEEEECCCCCeEEeee-CC-CCC-CCccCCCCceEEEe
Confidence 11111 11123477899999 45545444433 449999998876433222 11 233 89999 99988875
Q ss_pred ec---------------cCCeEEEEecccce
Q 022019 284 GR---------------KDPYILCWDLRKAV 299 (304)
Q Consensus 284 ~~---------------~d~~i~vwd~~~~~ 299 (304)
+. .++.|++||+.+++
T Consensus 301 ~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~ 331 (396)
T 3c5m_A 301 GCDAPVDVADADSYNIENDPFLYVLNTKAKS 331 (396)
T ss_dssp ECCC----------CCCCCCEEEEEETTTTB
T ss_pred cCCcceeeccccccccCCCCcEEEEecccCc
Confidence 41 24789999998765
No 184
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.62 E-value=1.8e-13 Score=109.63 Aligned_cols=205 Identities=9% Similarity=-0.021 Sum_probs=129.3
Q ss_pred CCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCcc
Q 022019 60 NNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSC 139 (304)
Q Consensus 60 ~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 139 (304)
......+++++++..+++...++.|.+||..+++....+...... . ... .|..+++ .++.
T Consensus 83 ~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~-~-----------~~~-------~p~~i~~-~~~~ 142 (328)
T 3dsm_A 83 FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMD-M-----------ESG-------STEQMVQ-YGKY 142 (328)
T ss_dssp CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCC-T-----------TTC-------BCCCEEE-ETTE
T ss_pred CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCcc-c-----------cCC-------CcceEEE-ECCE
Confidence 456889999999855555548999999999866442211110000 0 000 1222233 2444
Q ss_pred EEEEEe-CCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cC----------CeEEEEEcCCCCcc
Q 022019 140 VFASTT-RDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YN----------KSVRVFDVHRPGRD 207 (304)
Q Consensus 140 ~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d----------~~i~v~d~~~~~~~ 207 (304)
++++.. .++.|.++|+.+++....+.... ....+.++|+|++++++ .+ +.|.++|..+..
T Consensus 143 lyv~~~~~~~~v~viD~~t~~~~~~i~~g~------~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~-- 214 (328)
T 3dsm_A 143 VYVNCWSYQNRILKIDTETDKVVDELTIGI------QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFT-- 214 (328)
T ss_dssp EEEEECTTCCEEEEEETTTTEEEEEEECSS------CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTE--
T ss_pred EEEEcCCCCCEEEEEECCCCeEEEEEEcCC------CccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCe--
Confidence 455444 48899999999998877776533 44688999999977765 33 789999987631
Q ss_pred ceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEE--eccccCCeEEEEECCCCcEEEEee-
Q 022019 208 FEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYV--LHGQEGGVTHVQFSRDGNYLYTGG- 284 (304)
Q Consensus 208 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~- 284 (304)
....+. .........++|+| ++..|+++.. .|.+||..+++.... +.........++++|++..|+.+.
T Consensus 215 --v~~~~~---~~~g~~p~~la~~~-d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~ 286 (328)
T 3dsm_A 215 --VEKQFK---FKLGDWPSEVQLNG-TRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADA 286 (328)
T ss_dssp --EEEEEE---CCTTCCCEEEEECT-TSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEEC
T ss_pred --EEEEEe---cCCCCCceeEEEec-CCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcc
Confidence 111111 11112478999999 4555655543 899999988765321 222245689999999544444443
Q ss_pred ---ccCCeEEEEecccceee
Q 022019 285 ---RKDPYILCWDLRKAVQV 301 (304)
Q Consensus 285 ---~~d~~i~vwd~~~~~~~ 301 (304)
..++.|.+||.. ++.+
T Consensus 287 ~~y~~~~~V~v~d~~-g~~~ 305 (328)
T 3dsm_A 287 IDYQQQGIVYRYSPQ-GKLI 305 (328)
T ss_dssp TTSSSEEEEEEECTT-CCEE
T ss_pred cccccCCEEEEECCC-CCEE
Confidence 278999999997 6544
No 185
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.61 E-value=3.3e-13 Score=119.37 Aligned_cols=203 Identities=12% Similarity=0.069 Sum_probs=135.5
Q ss_pred eeEEEEcCCCCeEEEecCCCe----------------EEEeeCCCCCCccccccccccccCCccceEEEee--cCCeEEE
Q 022019 63 LKGIKWSPDGSSFLTSSEDKT----------------LRIFSLPENGISYDVNACSLAKDQDSYEASLVVT--EGESVYD 124 (304)
Q Consensus 63 V~~i~~s~~~~~l~s~~~dg~----------------v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~ 124 (304)
+..++|+|||+.|+.++.++. |.+|++.++.... ..+... +...+..
T Consensus 173 ~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~---------------~~v~~~~~~~~~~~~ 237 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSED---------------ILCAEFPDEPKWMGG 237 (710)
T ss_dssp SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGC---------------EEEECCTTCTTCEEE
T ss_pred cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccc---------------eEEeccCCCCeEEEE
Confidence 678999999999998887765 9999987543110 001111 1223445
Q ss_pred EeecCccceeCCCccEEEEEeC-----CCCEEEEEcCC------Ce-eeEEeecccccccccceEEEEECCCCcEEE-EE
Q 022019 125 FCWFPHMSASDPTSCVFASTTR-----DHPIHLWDATT------GL-LRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG 191 (304)
Q Consensus 125 ~~~~~~~~~~~~~~~~l~~~~~-----dg~i~i~d~~~------~~-~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~ 191 (304)
+.| +|+|++|+.++. +..|++||+.+ +. ....+..+.. .+.. .|+|+|..|+ .+
T Consensus 238 ~~~-------SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~-----~~~~-~~s~dg~~l~~~s 304 (710)
T 2xdw_A 238 AEL-------SDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFE-----GEYD-YVTNEGTVFTFKT 304 (710)
T ss_dssp EEE-------CTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSS-----SCEE-EEEEETTEEEEEE
T ss_pred EEE-------cCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCC-----cEEE-EEeccCCEEEEEE
Confidence 555 889999888765 56899999976 43 2333443322 3333 4888888877 44
Q ss_pred c----CCeEEEEEcCCCCccceeeeeeeccccccc-cceeEEEeecCCCcEEEEEecCCe--EEEEecCCceEeEEeccc
Q 022019 192 Y----NKSVRVFDVHRPGRDFEKYSTLKGNKEGQA-GIMSAIAFSPTHTGMLAIGSYSQT--SAIYREDNMELLYVLHGQ 264 (304)
Q Consensus 192 ~----d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~p~~~~~l~~~~~dg~--i~i~d~~~~~~~~~~~~~ 264 (304)
. ...|.+||+..+... ....+. .... ..+..++|++ ++.++++...++. |++||+.+++.+..+..+
T Consensus 305 ~~~~~~~~l~~~d~~~~~~~--~~~~l~---~~~~~~~~~~~~~~~-~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~ 378 (710)
T 2xdw_A 305 NRHSPNYRLINIDFTDPEES--KWKVLV---PEHEKDVLEWVACVR-SNFLVLCYLHDVKNTLQLHDLATGALLKIFPLE 378 (710)
T ss_dssp CTTCTTCEEEEEETTSCCGG--GCEEEE---CCCSSCEEEEEEEET-TTEEEEEEEETTEEEEEEEETTTCCEEEEECCC
T ss_pred CCCCCCCEEEEEeCCCCCcc--cceecc---CCCCCCeEEEEEEEc-CCEEEEEEEECCEEEEEEEECCCCCEEEecCCC
Confidence 3 236999998764211 112221 1112 3577899997 7788899998985 566787677777788877
Q ss_pred cCCeEEEEECCCCcEEEEee---ccCCeEEEEecccce
Q 022019 265 EGGVTHVQFSRDGNYLYTGG---RKDPYILCWDLRKAV 299 (304)
Q Consensus 265 ~~~v~~~~~~~~~~~l~~~~---~~d~~i~vwd~~~~~ 299 (304)
.+.+..+.++|++..|+... ...++|.+||+.+++
T Consensus 379 ~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 379 VGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp SSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred CceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 77899999999997666332 145789999998876
No 186
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.61 E-value=1e-13 Score=111.97 Aligned_cols=183 Identities=12% Similarity=0.066 Sum_probs=127.6
Q ss_pred ceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEE
Q 022019 62 FLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVF 141 (304)
Q Consensus 62 ~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l 141 (304)
.++.+++++...++++|+.++ +++|++++....... .... ........... |+.++| ++.+|
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~------~~~~-~~~~~~~~lp~-V~~l~f---------d~~~L 100 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITS------DSTP-LTFKWEKEIPD-VIFVCF---------HGDQV 100 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHS------SSCC-CCCSEEEECTT-EEEEEE---------ETTEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhcc------cccc-ccceEEeeCCC-eeEEEE---------CCCEE
Confidence 689999999999999999885 666987533210000 0000 11112333445 777766 67788
Q ss_pred EEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccceeeeeeecccccc
Q 022019 142 ASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQ 221 (304)
Q Consensus 142 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~ 221 (304)
+++ .++.|++||+.+.........+.. .+.++.+.+.. ++++..||.+.+||+..... . . +
T Consensus 101 ~v~-~~~~l~v~dv~sl~~~~~~~~~~~-----~v~~i~~~~p~-~av~~~dG~L~v~dl~~~~~--~---~-------~ 161 (388)
T 1xip_A 101 LVS-TRNALYSLDLEELSEFRTVTSFEK-----PVFQLKNVNNT-LVILNSVNDLSALDLRTKST--K---Q-------L 161 (388)
T ss_dssp EEE-ESSEEEEEESSSTTCEEEEEECSS-----CEEEEEECSSE-EEEEETTSEEEEEETTTCCE--E---E-------E
T ss_pred EEE-cCCcEEEEEchhhhccCccceeec-----ceeeEEecCCC-EEEEECCCCEEEEEccCCcc--c---c-------c
Confidence 888 889999999987654444444333 67787777653 33356999999999986321 1 1 2
Q ss_pred ccceeEEEeecCCCcEEEEEecCCeEEEEecCCceE--eEEe------c---cccCCeEEEEECCCCcEEEEee
Q 022019 222 AGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMEL--LYVL------H---GQEGGVTHVQFSRDGNYLYTGG 284 (304)
Q Consensus 222 ~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~------~---~~~~~v~~~~~~~~~~~l~~~~ 284 (304)
...|++++|+| .+ ++.|..||.+++|+...... ..++ . +|...|.++.|.+++.++++=+
T Consensus 162 ~~~Vs~v~WSp-kG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 162 AQNVTSFDVTN-SQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp EESEEEEEECS-SE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred cCCceEEEEcC-Cc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 34699999999 55 67899999999999887765 5556 2 3678899999999999988643
No 187
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.59 E-value=6.2e-13 Score=103.40 Aligned_cols=198 Identities=9% Similarity=0.030 Sum_probs=130.4
Q ss_pred ceeEEEEcCCCCeEE-EecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccE
Q 022019 62 FLKGIKWSPDGSSFL-TSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCV 140 (304)
Q Consensus 62 ~V~~i~~s~~~~~l~-s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 140 (304)
...+++++++|++++ +.+.++.|.+|+..+...... ..... ..|..+++++++++
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~-----------------~~~~~-------~~p~~i~~~~~g~l 80 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVL-----------------PFNGL-------YQPQGLAVDGAGTV 80 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EEC-----------------CCCSC-------CSCCCEEECTTCCE
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceE-----------------eeCCc-------CCcceeEECCCCCE
Confidence 678999999999777 547788999998754321100 00000 12344556888886
Q ss_pred EEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeecccc
Q 022019 141 FASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKE 219 (304)
Q Consensus 141 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~ 219 (304)
+++.. ++.|.+||....... .+.... ...+.+++++|+|+++++. .++.|.+|+...... . . . ..
T Consensus 81 ~v~~~-~~~i~~~d~~~~~~~-~~~~~~----~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~--~--~-~---~~ 146 (270)
T 1rwi_B 81 YVTDF-NNRVVTLAAGSNNQT-VLPFDG----LNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ--T--V-L---PF 146 (270)
T ss_dssp EEEET-TTEEEEECTTCSCCE-ECCCCS----CSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSC--E--E-C---CC
T ss_pred EEEcC-CCEEEEEeCCCceEe-eeecCC----cCCCcceEECCCCCEEEEECCCCEEEEEECCCcee--E--e-e---cc
Confidence 66665 889999998765432 222111 1267899999999877765 788999997543211 0 0 0 01
Q ss_pred ccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEecccce
Q 022019 220 GQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAV 299 (304)
Q Consensus 220 ~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~ 299 (304)
.....+.+++++| ++.++++...++.|.+||............+...+.+++++++|..+++.. .++.|.+|+.....
T Consensus 147 ~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~-~~~~v~~~~~~~~~ 224 (270)
T 1rwi_B 147 TGLNDPDGVAVDN-SGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEH-NTNQVVKLLAGSTT 224 (270)
T ss_dssp CSCCSCCCEEECT-TCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEET-TTSCEEEECTTCSC
T ss_pred ccCCCceeEEEeC-CCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEEC-CCCcEEEEcCCCCc
Confidence 2223467899999 566777777788999999877655443333336789999999997666665 78899999986643
No 188
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.59 E-value=4.9e-12 Score=102.81 Aligned_cols=216 Identities=13% Similarity=0.074 Sum_probs=123.9
Q ss_pred EEEEcCCCCeEEEec----------CCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 65 GIKWSPDGSSFLTSS----------EDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 65 ~i~~s~~~~~l~s~~----------~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
.++++|||++++.+. .++.|.+||..+.+....+.... . .... ..-.|..+++
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~---------------~-~~~~-~g~~p~~~~~ 132 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPD---------------A-PRFD-VGPYSWMNAN 132 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCC---------------c-cccc-cCCCccceEE
Confidence 899999999988875 36789999997654432211100 0 0000 0012445566
Q ss_pred CCCccEEEEEeC--CCCEEEEEcCCCeeeEE-eecccccc---cccc-------------------e-------------
Q 022019 135 DPTSCVFASTTR--DHPIHLWDATTGLLRCT-YRAYDAVD---EITA-------------------A------------- 176 (304)
Q Consensus 135 ~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~-~~~~~~~~---~~~~-------------------v------------- 176 (304)
+|+|++|++++. ++.|.++| .+++.... +....... .... +
T Consensus 133 spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~~ 211 (373)
T 2mad_H 133 TPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAA 211 (373)
T ss_pred CCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCceEEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEeccccccCC
Confidence 999999888874 47899999 88887766 54322100 0000 0
Q ss_pred ----EEEEECCCCcE-EEEEcCCeEEEEEcCCCCccceeeeeeecc------ccccccceeEEEeecCCCcEEEEEe---
Q 022019 177 ----FSVAFNPTGTK-IFAGYNKSVRVFDVHRPGRDFEKYSTLKGN------KEGQAGIMSAIAFSPTHTGMLAIGS--- 242 (304)
Q Consensus 177 ----~~i~~~~~~~~-l~~~~d~~i~v~d~~~~~~~~~~~~~~~~~------~~~~~~~v~~~~~~p~~~~~l~~~~--- 242 (304)
....+.+++.. ++++..+.+.+.|+....... ...+... ..-.......+.++|+++.++++..
T Consensus 212 ~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v--~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~ 289 (373)
T 2mad_H 212 QNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATN--KAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQS 289 (373)
T ss_pred cceeecceeEecCCEEEEEcCCceEEEEeccCCcceE--eeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCC
Confidence 00111222222 222334455555554321110 0111000 0001122334788995554444433
Q ss_pred ------cCCeEEEEecCCceEeEEeccccCCeEEEEECCCCc-EEEEeeccCCeEEEEecccceee
Q 022019 243 ------YSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGN-YLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 243 ------~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
..+.|.++|+.+++.+.++.. .....++.|+|||+ .++++...++.|.+||+.+++.+
T Consensus 290 ~~~~~~~~~~V~VID~~t~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv 354 (373)
T 2mad_H 290 AWKLHAAAKEVTSVTGLVGQTSSQISL-GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQD 354 (373)
T ss_pred cccccCCCCeEEEEECCCCEEEEEEEC-CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEE
Confidence 135799999999999999864 34579999999999 67776634899999999998765
No 189
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.59 E-value=3.6e-13 Score=118.81 Aligned_cols=199 Identities=13% Similarity=0.029 Sum_probs=126.7
Q ss_pred CCCCceeEEEEcCCCCeEE-----EecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccc
Q 022019 58 IPNNFLKGIKWSPDGSSFL-----TSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMS 132 (304)
Q Consensus 58 ~h~~~V~~i~~s~~~~~l~-----s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 132 (304)
+|...+.+++|||||++|| .|+.+..|++||+.+++...... .. ......++|
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~----------------~~-~~~~~~~~w----- 175 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDV----------------IE-GGKYATPKW----- 175 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCC----------------BS-CCTTCCCEE-----
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcc----------------cC-cccccceEE-----
Confidence 5666799999999999998 44556789999999775420000 00 000123444
Q ss_pred eeCCCccEEEEEeCCCC-------------EEEEEcCCCeee--EEeecccccccccceEEEEECCCCcEEE-EEcCC--
Q 022019 133 ASDPTSCVFASTTRDHP-------------IHLWDATTGLLR--CTYRAYDAVDEITAAFSVAFNPTGTKIF-AGYNK-- 194 (304)
Q Consensus 133 ~~~~~~~~l~~~~~dg~-------------i~i~d~~~~~~~--~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~~d~-- 194 (304)
+|||+.|+.++.|.. |++|++.++... ..+... .+...+.++.|+|||++|+ ++.++
T Consensus 176 --spDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~---~~~~~~~~~~~SpDG~~l~~~~~~~~~ 250 (695)
T 2bkl_A 176 --TPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERT---GDPTTFLQSDLSRDGKYLFVYILRGWS 250 (695)
T ss_dssp --CTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCC---CCTTCEEEEEECTTSCCEEEEEEETTT
T ss_pred --ecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecC---CCCEEEEEEEECCCCCEEEEEEeCCCC
Confidence 889999999988776 999999887632 222221 1222678999999999888 44444
Q ss_pred --eEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEe---cCCeEEEEecCCceE---eEEeccc-c
Q 022019 195 --SVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS---YSQTSAIYREDNMEL---LYVLHGQ-E 265 (304)
Q Consensus 195 --~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~---~dg~i~i~d~~~~~~---~~~~~~~-~ 265 (304)
.|+++|... .... .+. .+...+....+ |+++ +++... .++.|.+||+.++.. ...+..+ .
T Consensus 251 ~~~l~~~~~~~--~~~~---~l~----~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~ 319 (695)
T 2bkl_A 251 ENDVYWKRPGE--KDFR---LLV----KGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSS 319 (695)
T ss_dssp EEEEEEECTTC--SSCE---EEE----ECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSS
T ss_pred ceEEEEEcCCC--CceE---Eee----cCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCC
Confidence 556665432 2222 221 12223445556 5355 555554 257899999977653 2233323 4
Q ss_pred CCeEEEEECCCCcEEEEeeccCCeEEEEecc
Q 022019 266 GGVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 266 ~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~ 296 (304)
..+..++|+ ++.++++.. .|+..+||.+.
T Consensus 320 ~~l~~~~~~-~~~lv~~~~-~dg~~~l~~~~ 348 (695)
T 2bkl_A 320 ASLLSVSIV-GGHLSLEYL-KDATSEVRVAT 348 (695)
T ss_dssp CEEEEEEEE-TTEEEEEEE-ETTEEEEEEEE
T ss_pred CeEEEEEEE-CCEEEEEEE-ECCEEEEEEEe
Confidence 468888998 677777777 89988888765
No 190
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.59 E-value=5.4e-12 Score=100.26 Aligned_cols=160 Identities=11% Similarity=0.169 Sum_probs=108.6
Q ss_pred CccceeCCCccEEEEEeCC---------------CCEEEEEcCCCeeeEEeecccccccccceEEEEEC----CCCcEEE
Q 022019 129 PHMSASDPTSCVFASTTRD---------------HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFN----PTGTKIF 189 (304)
Q Consensus 129 ~~~~~~~~~~~~l~~~~~d---------------g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~----~~~~~l~ 189 (304)
|..++++++|+++++...+ +.|..+|.. ++........ .....++|+ |+++.++
T Consensus 119 ~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~------~~~~~i~~~~~~d~dg~~l~ 191 (314)
T 1pjx_A 119 CNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAF------QFPNGIAVRHMNDGRPYQLI 191 (314)
T ss_dssp CCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEE------SSEEEEEEEECTTSCEEEEE
T ss_pred CcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCC------CCcceEEEecccCCCCCEEE
Confidence 4456678899888777655 567777765 5443322211 145789999 9997766
Q ss_pred -EE-cCCeEEEEEcCCCCccceeeeeeeccccccc-cceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccC
Q 022019 190 -AG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQA-GIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEG 266 (304)
Q Consensus 190 -~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 266 (304)
+. .++.|.+||+...+. ........ ....+. ..+..+++++ ++.++++...++.|.+||..+++.+..+..+..
T Consensus 192 v~~~~~~~i~~~~~~~~g~-~~~~~~~~-~~~~~~~~~p~~i~~d~-~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~ 268 (314)
T 1pjx_A 192 VAETPTKKLWSYDIKGPAK-IENKKVWG-HIPGTHEGGADGMDFDE-DNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFE 268 (314)
T ss_dssp EEETTTTEEEEEEEEETTE-EEEEEEEE-ECCCCSSCEEEEEEEBT-TCCEEEEEETTTEEEEECTTCBSCSEEEECSSS
T ss_pred EEECCCCeEEEEECCCCCc-cccceEEE-ECCCCCCCCCCceEECC-CCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCC
Confidence 44 678999999862111 11111111 112222 4577899999 677777777789999999987777777776667
Q ss_pred CeEEEEECCCCcEEEEeeccCCeEEEEecccc
Q 022019 267 GVTHVQFSRDGNYLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 267 ~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~ 298 (304)
.+.+++|+|+|++|+.++..++.|..|++...
T Consensus 269 ~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 269 KPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred CceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 89999999999966666536789999998753
No 191
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.58 E-value=8.8e-13 Score=107.00 Aligned_cols=206 Identities=12% Similarity=0.126 Sum_probs=126.3
Q ss_pred CceeEEEEcCCCCeEEEecC--CCeEEEeeCCCCCCccc-cccccc-----ccc---------CCccceEEEeecCCeEE
Q 022019 61 NFLKGIKWSPDGSSFLTSSE--DKTLRIFSLPENGISYD-VNACSL-----AKD---------QDSYEASLVVTEGESVY 123 (304)
Q Consensus 61 ~~V~~i~~s~~~~~l~s~~~--dg~v~vwd~~~~~~~~~-~~~~~~-----~~~---------~~~~~~~~~~~~~~~v~ 123 (304)
.....++|+|||++|+++.. +++|.+||+.+++.... +..... ... .+.....+.......+.
T Consensus 108 ~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~ 187 (361)
T 2oiz_A 108 NYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVA 187 (361)
T ss_dssp CCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEE
T ss_pred CCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEe
Confidence 45778999999999998863 68999999998766544 221110 000 00111111111111111
Q ss_pred EE-----eec----CccceeCCCccEEEEEeCCCCEEEEEcCCCeee--EEeecccc--cc---cccceEEEEECCCCcE
Q 022019 124 DF-----CWF----PHMSASDPTSCVFASTTRDHPIHLWDATTGLLR--CTYRAYDA--VD---EITAAFSVAFNPTGTK 187 (304)
Q Consensus 124 ~~-----~~~----~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~--~~---~~~~v~~i~~~~~~~~ 187 (304)
.. .|. |....+++++..++..+.++.|.++|+..+... ..+..... .. .......++|+|+++.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~ 267 (361)
T 2oiz_A 188 SQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGR 267 (361)
T ss_dssp EEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTE
T ss_pred eeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCe
Confidence 00 111 112233456667777778899999998755422 22221110 00 0011223789999888
Q ss_pred EEEE-c-----------CCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCc
Q 022019 188 IFAG-Y-----------NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM 255 (304)
Q Consensus 188 l~~~-~-----------d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~ 255 (304)
+++. . .+.|.+||+.+. +.+..+ ..+. +.+++|+| ++++|++++. +.|.+||..++
T Consensus 268 lyv~~~~~~~~~~~~~~~~~v~viD~~t~----~~v~~i----~~~~--p~~ia~sp-dg~~l~v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 268 MYVFMHPDGKEGTHKFPAAEIWVMDTKTK----QRVARI----PGRD--ALSMTIDQ-QRNLMLTLDG-GNVNVYDISQP 335 (361)
T ss_dssp EEEEEESSCCTTCTTCCCSEEEEEETTTT----EEEEEE----ECTT--CCEEEEET-TTTEEEEECS-SCEEEEECSSS
T ss_pred EEEEEccCCCcccccCCCceEEEEECCCC----cEEEEE----ecCC--eeEEEECC-CCCEEEEeCC-CeEEEEECCCC
Confidence 8854 3 348999999874 222222 2233 78999999 5667777776 99999999999
Q ss_pred --eEeEEeccccCCeEEEEECCCCc
Q 022019 256 --ELLYVLHGQEGGVTHVQFSRDGN 278 (304)
Q Consensus 256 --~~~~~~~~~~~~v~~~~~~~~~~ 278 (304)
+.+.++..+......++++|+|+
T Consensus 336 ~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 336 EPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp SCEEEEEETTSCSSEEEEEECCCSC
T ss_pred cceeeEEeccCCCCcEEEEecCCCC
Confidence 99999866777789999999986
No 192
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.57 E-value=2.4e-12 Score=103.65 Aligned_cols=217 Identities=12% Similarity=0.133 Sum_probs=126.7
Q ss_pred EEEEcCCCCeEEEec----------CCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 65 GIKWSPDGSSFLTSS----------EDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 65 ~i~~s~~~~~l~s~~----------~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
.++++|||++++++. .++.|.+||..+.+....+... .+... ..--.|..+++
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~----------------~g~r~-~~g~~P~~~a~ 144 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELP----------------DAPRF-LVGTYPWMTSL 144 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEET----------------TCCCC-CBSCCGGGEEE
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECC----------------Ccccc-ccCCCCceEEE
Confidence 499999999887765 3678999999876543322110 00000 00113445566
Q ss_pred CCCccEEEEEeC--CCCEEEEEcCCCeeeEEeeccccc------------------------cc---------------c
Q 022019 135 DPTSCVFASTTR--DHPIHLWDATTGLLRCTYRAYDAV------------------------DE---------------I 173 (304)
Q Consensus 135 ~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~------------------------~~---------------~ 173 (304)
+|||++++++.. ++.|.++|+.+++.+.++...... .. .
T Consensus 145 spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~ 224 (386)
T 3sjl_D 145 TPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPED 224 (386)
T ss_dssp CTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTT
T ss_pred cCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceecccc
Confidence 777776666653 466777777776665555431100 00 0
Q ss_pred cce-EEEEE-CCCCcEEEEEcCCeEEEEEcCCCCccceeeeeee--c---c-ccccccceeEEEeecCCCcEEEEEec--
Q 022019 174 TAA-FSVAF-NPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLK--G---N-KEGQAGIMSAIAFSPTHTGMLAIGSY-- 243 (304)
Q Consensus 174 ~~v-~~i~~-~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~~~~--~---~-~~~~~~~v~~~~~~p~~~~~l~~~~~-- 243 (304)
..+ ....| .++|++++++.+|.|++.|+....... ...+. . . ..-.......++++|++++++++-..
T Consensus 225 ~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v--~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~ 302 (386)
T 3sjl_D 225 EFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKF--LPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRD 302 (386)
T ss_dssp SCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEE--CCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECC
T ss_pred ccccccceeEcCCCcEEEEeCCCEEEEEECCCCccee--ecceeccccccccccccCCCcceeeECCCCCeEEEEecccc
Confidence 000 01233 245555556666777777775422111 11110 0 0 00011234457889955544444332
Q ss_pred -------CCeEEEEecCCceEeEEeccccCCeEEEEECCCCc-EEEEeeccCCeEEEEecccceee
Q 022019 244 -------SQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGN-YLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 244 -------dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
.+.|.++|+.+++.+..+.. ...+.++.++||++ +|+++...++.|.++|..+++.+
T Consensus 303 ~~~hk~~~~~V~viD~~t~kv~~~i~v-g~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~ 367 (386)
T 3sjl_D 303 EWRHKTASRFVVVLDAKTGERLAKFEM-GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEEL 367 (386)
T ss_dssp TTCTTSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEE
T ss_pred ccccCCCCCEEEEEECCCCeEEEEEEC-CCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEE
Confidence 25799999999999999874 34678999999997 77776646999999999998765
No 193
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.56 E-value=1.2e-11 Score=105.67 Aligned_cols=203 Identities=7% Similarity=0.017 Sum_probs=134.7
Q ss_pred ceeEEEEcCCCCeEEEecCCCeEEEeeCC--CCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeC----
Q 022019 62 FLKGIKWSPDGSSFLTSSEDKTLRIFSLP--ENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASD---- 135 (304)
Q Consensus 62 ~V~~i~~s~~~~~l~s~~~dg~v~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~---- 135 (304)
.+..+.|+|||+++++++.|+.|.+||+. +.+.. ..+..+..... ++++
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v------------------~~i~~G~~P~~-------ia~s~~~~ 252 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTV------------------AEIKIGSEARS-------IETSKMEG 252 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEE------------------EEEECCSEEEE-------EEECCSTT
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEe------------------EEEecCCCCce-------eEEccccC
Confidence 46789999999999999999999999985 33221 11111222333 4557
Q ss_pred CCccEEEEEeC-CCCEEEEEcCCCeeeEEeeccccc------ccccceEEEEECCCCcEEEEE--cCCeEEEEEcCCCCc
Q 022019 136 PTSCVFASTTR-DHPIHLWDATTGLLRCTYRAYDAV------DEITAAFSVAFNPTGTKIFAG--YNKSVRVFDVHRPGR 206 (304)
Q Consensus 136 ~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~------~~~~~v~~i~~~~~~~~l~~~--~d~~i~v~d~~~~~~ 206 (304)
|+|+++++++. +++|.++|..+.+.+..+...... .....+..+..++++..++.. .+|.|.++|......
T Consensus 253 pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~ 332 (567)
T 1qks_A 253 WEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNN 332 (567)
T ss_dssp CTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSE
T ss_pred CCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCcc
Confidence 69988877765 589999999999888777643210 011257788999987776643 779999999875321
Q ss_pred cceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEecc-----ccCCeEEEEECCCCcEEE
Q 022019 207 DFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHG-----QEGGVTHVQFSRDGNYLY 281 (304)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~ 281 (304)
. ....+ ........+.|+|++..++++...++.|.++|+.+++.+..+.. |.+.-..+ ++|++..++
T Consensus 333 -~-~v~~i-----~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~ 404 (567)
T 1qks_A 333 -L-KTTEI-----SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVW 404 (567)
T ss_dssp -E-EEEEE-----ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEE
T ss_pred -c-eeeee-----eccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEE
Confidence 1 11111 11233567899995444455555689999999999988776654 32222222 588855554
Q ss_pred -EeeccCCeEEEEeccc
Q 022019 282 -TGGRKDPYILCWDLRK 297 (304)
Q Consensus 282 -~~~~~d~~i~vwd~~~ 297 (304)
++...++.|.++|..+
T Consensus 405 ~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 405 ATSHMGDDSVALIGTDP 421 (567)
T ss_dssp EEEBSSSSEEEEEECCT
T ss_pred EeCCCCCCeEEEecCCC
Confidence 4432468999999987
No 194
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.56 E-value=4.1e-12 Score=98.95 Aligned_cols=206 Identities=9% Similarity=0.031 Sum_probs=139.6
Q ss_pred ceeeecCCCcccccccceeeeecCCC-CceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceE
Q 022019 35 PLIRFDVPPHRTYHFYNQFRTSSIPN-NFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEAS 113 (304)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~h~-~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (304)
.+..|+..+.+... .+..+. ..+.++.++|+|++|++ .++.|..||. +++.......
T Consensus 16 ~v~~~d~~tG~~~w------~~~~~~~~~~~~~~~~pdG~ilvs--~~~~V~~~d~-~G~~~W~~~~------------- 73 (276)
T 3no2_A 16 KIAIINKDTKEIVW------EYPLEKGWECNSVAATKAGEILFS--YSKGAKMITR-DGRELWNIAA------------- 73 (276)
T ss_dssp EEEEEETTTTEEEE------EEECCTTCCCCEEEECTTSCEEEE--CBSEEEEECT-TSCEEEEEEC-------------
T ss_pred EEEEEECCCCeEEE------EeCCCccCCCcCeEECCCCCEEEe--CCCCEEEECC-CCCEEEEEcC-------------
Confidence 34556655555443 333444 46889999999998883 4778999998 5554333221
Q ss_pred EEeecCCeEEEEeecCccceeCCCccEEEEEeC-CCCEEEEEcCCCeeeEEeeccccc-ccccceEEEEECCCCcEEEEE
Q 022019 114 LVVTEGESVYDFCWFPHMSASDPTSCVFASTTR-DHPIHLWDATTGLLRCTYRAYDAV-DEITAAFSVAFNPTGTKIFAG 191 (304)
Q Consensus 114 ~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~-~~~~~v~~i~~~~~~~~l~~~ 191 (304)
.....+.+..+ .++|+++++.+. ++.|..+|. +++.+..+...... ........+.+.++|+++++.
T Consensus 74 ---~~~~~~~~~~~-------~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~ 142 (276)
T 3no2_A 74 ---PAGCEMQTARI-------LPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPL 142 (276)
T ss_dssp ---CTTCEEEEEEE-------CTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEE
T ss_pred ---CCCccccccEE-------CCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEe
Confidence 11123444443 789999999887 777888885 67776666543211 111245567889999999976
Q ss_pred -cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEecccc-----
Q 022019 192 -YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQE----- 265 (304)
Q Consensus 192 -~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~----- 265 (304)
.++.|..||.. +. .+..... ...+.++.+.+ ++.++++++.++.|..+|..+++.+.++..+.
T Consensus 143 ~~~~~v~~~d~~-G~----~~w~~~~-----~~~~~~~~~~~-~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~ 211 (276)
T 3no2_A 143 FATSEVREIAPN-GQ----LLNSVKL-----SGTPFSSAFLD-NGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQ 211 (276)
T ss_dssp TTTTEEEEECTT-SC----EEEEEEC-----SSCCCEEEECT-TSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCC
T ss_pred cCCCEEEEECCC-CC----EEEEEEC-----CCCccceeEcC-CCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCcc
Confidence 89999999986 32 2222221 12355677788 77788888888899999999999988886432
Q ss_pred -CCeEEEEECCCCcEEEEee
Q 022019 266 -GGVTHVQFSRDGNYLYTGG 284 (304)
Q Consensus 266 -~~v~~~~~~~~~~~l~~~~ 284 (304)
..+..+...++|..+++..
T Consensus 212 l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 212 LFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp CSEEEEEEECTTSCEEEEEE
T ss_pred ccccccceEcCCCCEEEEec
Confidence 2378899999999888763
No 195
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.54 E-value=4.3e-12 Score=103.94 Aligned_cols=217 Identities=12% Similarity=0.126 Sum_probs=132.4
Q ss_pred EEEEcCCCCeEEEec----------CCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 65 GIKWSPDGSSFLTSS----------EDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 65 ~i~~s~~~~~l~s~~----------~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
.+.++|||++|+++. .++.|.++|..+.+....+.. ...... ...-.|..+.+
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v----------------~g~~r~-~~g~~P~~~~~ 184 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIEL----------------PDAPRF-LVGTYQWMNAL 184 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEE----------------TTCCCC-CBSCCGGGSEE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEEC----------------CCcccc-ccCCCcceEEE
Confidence 899999999888775 367899999987654322111 000000 00124667788
Q ss_pred CCCccEEEEEeC--CCCEEEEEcCCCeeeEEeecccccc--cccceEEE-------------------------------
Q 022019 135 DPTSCVFASTTR--DHPIHLWDATTGLLRCTYRAYDAVD--EITAAFSV------------------------------- 179 (304)
Q Consensus 135 ~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~~--~~~~v~~i------------------------------- 179 (304)
+|||++++++.. ++.|.+.|+.+++.+..+....... ....-..+
T Consensus 185 spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~ 264 (426)
T 3c75_H 185 TPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDE 264 (426)
T ss_dssp CTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTS
T ss_pred cCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCC
Confidence 999999988874 5789999999998877776532100 00000112
Q ss_pred ------EECCCCcEEE-EEcCCeEEEEEcCCCCccceeeeeeec---ccc---ccccceeEEEeecCCCcEEEEEec---
Q 022019 180 ------AFNPTGTKIF-AGYNKSVRVFDVHRPGRDFEKYSTLKG---NKE---GQAGIMSAIAFSPTHTGMLAIGSY--- 243 (304)
Q Consensus 180 ------~~~~~~~~l~-~~~d~~i~v~d~~~~~~~~~~~~~~~~---~~~---~~~~~v~~~~~~p~~~~~l~~~~~--- 243 (304)
.|.+++..++ +...+.+.+.|+....... ...+.. ... ........++++|++++++++...
T Consensus 265 p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v--~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~ 342 (426)
T 3c75_H 265 LLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATF--RAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDE 342 (426)
T ss_dssp CBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEE--CCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCT
T ss_pred ceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEE--eeeeeeccccccccccccCCceeeEEcCCCCEEEEEeccccc
Confidence 2344444433 3344566666664321100 000000 000 001112237899955544544331
Q ss_pred ------CCeEEEEecCCceEeEEeccccCCeEEEEECCCCc-EEEEeeccCCeEEEEecccceee
Q 022019 244 ------SQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGN-YLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 244 ------dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
++.|.++|..+.+.+.++... .....+.|+|||+ +++++...++.|.++|+.+++.+
T Consensus 343 gthk~~s~~VsVID~~T~kvv~~I~vg-~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv 406 (426)
T 3c75_H 343 WKHKAASRFVVVLNAETGERINKIELG-HEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEEL 406 (426)
T ss_dssp TCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEE
T ss_pred ccccCCCCEEEEEECCCCeEEEEEECC-CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEE
Confidence 357999999999999998743 3578999999999 88888745999999999998765
No 196
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.53 E-value=5.4e-12 Score=101.02 Aligned_cols=200 Identities=10% Similarity=-0.014 Sum_probs=132.5
Q ss_pred CceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccE
Q 022019 61 NFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCV 140 (304)
Q Consensus 61 ~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 140 (304)
....++.+. ++..+++...++.|.+||..+++....+ ........+ ++++++++
T Consensus 44 ~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i------------------~~~~~p~~i-------~~~~~g~l 97 (328)
T 3dsm_A 44 DVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRI------------------TGFTSPRYI-------HFLSDEKA 97 (328)
T ss_dssp SCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEE------------------ECCSSEEEE-------EEEETTEE
T ss_pred ccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEc------------------CCCCCCcEE-------EEeCCCeE
Confidence 346778875 4555666667899999999876543221 112233334 44667765
Q ss_pred EEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE--cCCeEEEEEcCCCCccceeeeeeeccc
Q 022019 141 FASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG--YNKSVRVFDVHRPGRDFEKYSTLKGNK 218 (304)
Q Consensus 141 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~--~d~~i~v~d~~~~~~~~~~~~~~~~~~ 218 (304)
+++...++.|.+||+.+++....+..............+++ .+++.+++. .++.|.++|+.+.. ....+..
T Consensus 98 yv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~----~~~~i~~-- 170 (328)
T 3dsm_A 98 YVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDK----VVDELTI-- 170 (328)
T ss_dssp EEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTE----EEEEEEC--
T ss_pred EEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCe----EEEEEEc--
Confidence 55555889999999999988777665431111113346667 344444454 38999999998641 1122211
Q ss_pred cccccceeEEEeecCCCcEEEEEecC----------CeEEEEecCCceEeEEeccc-cCCeEEEEECCCCcEEEEeeccC
Q 022019 219 EGQAGIMSAIAFSPTHTGMLAIGSYS----------QTSAIYREDNMELLYVLHGQ-EGGVTHVQFSRDGNYLYTGGRKD 287 (304)
Q Consensus 219 ~~~~~~v~~~~~~p~~~~~l~~~~~d----------g~i~i~d~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~~d 287 (304)
......++++| ++++++++..+ +.|.++|..+++....+... ......++|+|++++|+++. .
T Consensus 171 ---g~~p~~i~~~~-dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~-~- 244 (328)
T 3dsm_A 171 ---GIQPTSLVMDK-YNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWIN-N- 244 (328)
T ss_dssp ---SSCBCCCEECT-TSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEES-S-
T ss_pred ---CCCccceEEcC-CCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEc-c-
Confidence 12246788999 66676666554 78999999999887777532 23679999999999999876 4
Q ss_pred CeEEEEeccccee
Q 022019 288 PYILCWDLRKAVQ 300 (304)
Q Consensus 288 ~~i~vwd~~~~~~ 300 (304)
.|.+||+.+++.
T Consensus 245 -~v~~~d~~t~~~ 256 (328)
T 3dsm_A 245 -DIWRMPVEADRV 256 (328)
T ss_dssp -SEEEEETTCSSC
T ss_pred -EEEEEECCCCce
Confidence 899999988764
No 197
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.53 E-value=6.6e-11 Score=93.34 Aligned_cols=207 Identities=11% Similarity=0.048 Sum_probs=132.5
Q ss_pred cCCCCceeEEEEcCC-CCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeC
Q 022019 57 SIPNNFLKGIKWSPD-GSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASD 135 (304)
Q Consensus 57 ~~h~~~V~~i~~s~~-~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 135 (304)
..+..---+..|+|+ +.++++...++.|..||..++.. ........+..+++ +
T Consensus 9 ~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-------------------~~~~~~~~~~~i~~-------~ 62 (297)
T 3g4e_A 9 PENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-------------------QRVTMDAPVSSVAL-------R 62 (297)
T ss_dssp CCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-------------------EEEECSSCEEEEEE-------B
T ss_pred ccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-------------------EEEeCCCceEEEEE-------C
Confidence 344445678999995 45666777789999999875432 11122345555555 7
Q ss_pred CCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cC---------CeEEEEEcCCCC
Q 022019 136 PTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YN---------KSVRVFDVHRPG 205 (304)
Q Consensus 136 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d---------~~i~v~d~~~~~ 205 (304)
++|+++++ . ++.|.+||..+++.......... .....+..++++|+|+++++. .. ..-.+|.+...+
T Consensus 63 ~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~~~~~-~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g 139 (297)
T 3g4e_A 63 QSGGYVAT-I-GTKFCALNWKEQSAVVLATVDND-KKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH 139 (297)
T ss_dssp TTSSEEEE-E-TTEEEEEETTTTEEEEEEECCTT-CSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS
T ss_pred CCCCEEEE-E-CCeEEEEECCCCcEEEEEecCCC-CCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC
Confidence 78885554 4 55799999988875443332211 112357899999999977754 21 334555554322
Q ss_pred ccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEec--CCce-----EeEEeccccCCeEEEEECCCCc
Q 022019 206 RDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRE--DNME-----LLYVLHGQEGGVTHVQFSRDGN 278 (304)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~--~~~~-----~~~~~~~~~~~v~~~~~~~~~~ 278 (304)
.. .. . .........++|+|++..++++.+.++.|.+||+ .++. ....+..+......++++++|.
T Consensus 140 ~~-~~---~----~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~ 211 (297)
T 3g4e_A 140 HV-KK---Y----FDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGK 211 (297)
T ss_dssp CE-EE---E----EEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSC
T ss_pred CE-EE---E----eeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCC
Confidence 11 11 1 1122336789999955556677777899999987 3443 2333444445678999999998
Q ss_pred EEEEeeccCCeEEEEecccceee
Q 022019 279 YLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 279 ~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
+.++.. .++.|..||..+++.+
T Consensus 212 lwva~~-~~~~v~~~d~~tG~~~ 233 (297)
T 3g4e_A 212 LWVACY-NGGRVIRLDPVTGKRL 233 (297)
T ss_dssp EEEEEE-TTTEEEEECTTTCCEE
T ss_pred EEEEEc-CCCEEEEEcCCCceEE
Confidence 777666 7889999999877654
No 198
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.53 E-value=6.3e-11 Score=93.25 Aligned_cols=201 Identities=11% Similarity=0.108 Sum_probs=136.2
Q ss_pred cCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEe-ecCCeEEEEeecCccceeC
Q 022019 57 SIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVV-TEGESVYDFCWFPHMSASD 135 (304)
Q Consensus 57 ~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~ 135 (304)
..+...+.+++++++|..+++...++.|.+||.. +.... ... .....+..+++ +
T Consensus 11 ~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~-----------------~~~~~~~~~~~~i~~-------~ 65 (299)
T 2z2n_A 11 TNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITE-----------------YPLPTPDAKVMCLTI-------S 65 (299)
T ss_dssp CSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEE-----------------EECSSTTCCEEEEEE-------C
T ss_pred CCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEE-----------------ecCCcccCceeeEEE-------C
Confidence 3456679999999999988877778899999976 32210 000 01234445544 7
Q ss_pred CCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeee
Q 022019 136 PTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTL 214 (304)
Q Consensus 136 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~ 214 (304)
+++.++++...++.|..||.. ++. ..+.... ....+.+++++++++++++. .++.|.+||. .+. .. ..
T Consensus 66 ~~g~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~--~~---~~ 134 (299)
T 2z2n_A 66 SDGEVWFTENAANKIGRITKK-GII-KEYTLPN---PDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGK--IR---EY 134 (299)
T ss_dssp TTSCEEEEETTTTEEEEECTT-SCE-EEEECSS---TTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCC--EE---EE
T ss_pred CCCCEEEeCCCCCeEEEECCC-CcE-EEEeCCC---cCCCceeeEECCCCCEEEEecCCceEEEECC-CCC--EE---Ee
Confidence 788888877778889999976 432 2232211 12267899999999888776 6789999998 321 11 11
Q ss_pred eccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEE-eccccCCeEEEEECCCCcEEEEeeccCCeEEEE
Q 022019 215 KGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYV-LHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCW 293 (304)
Q Consensus 215 ~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vw 293 (304)
.. ......+..++++| ++.++++...++.|..||. +++.... +......+.+++++++|...++.. .++.|.+|
T Consensus 135 ~~--~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~~~~i~~~ 209 (299)
T 2z2n_A 135 EL--PNKGSYPSFITLGS-DNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEI-IGNKIGRI 209 (299)
T ss_dssp EC--SSTTCCEEEEEECT-TSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEET-TTTEEEEE
T ss_pred cC--CCCCCCCceEEEcC-CCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEcc-CCceEEEE
Confidence 11 12234578999999 6667777767789999998 5554332 333445688999999999766665 68899999
Q ss_pred ecccce
Q 022019 294 DLRKAV 299 (304)
Q Consensus 294 d~~~~~ 299 (304)
|. +++
T Consensus 210 ~~-~g~ 214 (299)
T 2z2n_A 210 TT-SGE 214 (299)
T ss_dssp CT-TCC
T ss_pred CC-CCc
Confidence 98 554
No 199
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.52 E-value=4e-11 Score=94.58 Aligned_cols=196 Identities=11% Similarity=0.089 Sum_probs=122.7
Q ss_pred CCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCc
Q 022019 59 PNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS 138 (304)
Q Consensus 59 h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 138 (304)
....+.+++++++|+++++. ++.|.+||..++......... .. .....+.+++ ++|+|
T Consensus 52 ~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~~~~~~~-----~~--------~~~~~~~di~-------~d~dG 109 (297)
T 3g4e_A 52 MDAPVSSVALRQSGGYVATI--GTKFCALNWKEQSAVVLATVD-----ND--------KKNNRFNDGK-------VDPAG 109 (297)
T ss_dssp CSSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEEEEEEECC-----TT--------CSSEEEEEEE-------ECTTS
T ss_pred CCCceEEEEECCCCCEEEEE--CCeEEEEECCCCcEEEEEecC-----CC--------CCCCCCCCEE-------ECCCC
Confidence 34679999999999965543 567999998755321100000 00 0012234444 48899
Q ss_pred cEEEEEeCC---------CCEEEEEcCC-CeeeEEeecccccccccceEEEEECCCCcEEE-EE-cCCeEEEEEcCCCCc
Q 022019 139 CVFASTTRD---------HPIHLWDATT-GLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGR 206 (304)
Q Consensus 139 ~~l~~~~~d---------g~i~i~d~~~-~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~v~d~~~~~~ 206 (304)
+++++.... ....+|.+.. ++........ .....++|+|+++.++ +. .++.|.+||+.....
T Consensus 110 ~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~------~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G 183 (297)
T 3g4e_A 110 RYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQV------DISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTG 183 (297)
T ss_dssp CEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEE------SBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTC
T ss_pred CEEEecCCcccccccccCCCcEEEEEECCCCEEEEeecc------ccccceEEcCCCCEEEEecCCCCcEEEEeccCCCC
Confidence 877765322 2345555543 3332222211 1567899999998877 44 678999999852111
Q ss_pred cceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEEC-CCCcEEEEee
Q 022019 207 DFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFS-RDGNYLYTGG 284 (304)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~ 284 (304)
.......+. ........+..+++++ ++.++++....+.|..||..+++.+..+..+...+++++|. |+++.|+.++
T Consensus 184 ~~~~~~~~~-~~~~~~~~p~g~~~d~-~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 184 QISNRRSVY-KLEKEEQIPDGMCIDA-EGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp CEEEEEEEE-ECCGGGCEEEEEEEBT-TSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEE
T ss_pred cccCcEEEE-ECCCCCCCCCeeEECC-CCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEc
Confidence 111111111 1122334578899999 66777777778899999998899888888777789999998 8888776665
No 200
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.52 E-value=1.2e-11 Score=101.96 Aligned_cols=207 Identities=14% Similarity=0.109 Sum_probs=132.4
Q ss_pred CCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCcc
Q 022019 60 NNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSC 139 (304)
Q Consensus 60 ~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 139 (304)
-.....|+|+++++++++...++.|++||..++... ....... .|. ++++++++
T Consensus 130 ~~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~------------------~~~~~~~-------~~~-ia~~~~g~ 183 (409)
T 3hrp_A 130 FKYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVT------------------TVHPGFK-------GGK-PAVTKDKQ 183 (409)
T ss_dssp CCCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEE------------------EEEETCC-------BCB-CEECTTSS
T ss_pred cCCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEE------------------EeeccCC-------CCc-eeEecCCC
Confidence 346889999999998888778899999998754321 1111111 122 45588999
Q ss_pred EEEEEeCCC--CEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeec
Q 022019 140 VFASTTRDH--PIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKG 216 (304)
Q Consensus 140 ~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~ 216 (304)
.|+++..++ .|.+++...+.....+..... .....+.+++++|++..|+++ .++.|+.||..... ...+.....
T Consensus 184 ~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~-~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~--~~~~~~~~~ 260 (409)
T 3hrp_A 184 RVYSIGWEGTHTVYVYMKASGWAPTRIGQLGS-TFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQE--VTLIKQLEL 260 (409)
T ss_dssp EEEEEBSSTTCEEEEEEGGGTTCEEEEEECCT-TSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCC--EEEEEECCC
T ss_pred cEEEEecCCCceEEEEEcCCCceeEEeeeccc-hhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCC--EEEEecccc
Confidence 888888766 788888876554333310000 011256789999954444434 78899999987532 111111001
Q ss_pred cccccccc--eeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEecccc---------------CCeEEEEECCCCcE
Q 022019 217 NKEGQAGI--MSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQE---------------GGVTHVQFSRDGNY 279 (304)
Q Consensus 217 ~~~~~~~~--v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---------------~~v~~~~~~~~~~~ 279 (304)
.+.... ...++|+|+++.++++-..++.|+.|+.... +..+.++. .....++++|+|.
T Consensus 261 --~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~- 335 (409)
T 3hrp_A 261 --SGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN- 335 (409)
T ss_dssp --CSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-
T ss_pred --cCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-
Confidence 111111 1389999966778888788899999997643 22333222 3478999999998
Q ss_pred EEEeec-cCCeEEEEeccccee
Q 022019 280 LYTGGR-KDPYILCWDLRKAVQ 300 (304)
Q Consensus 280 l~~~~~-~d~~i~vwd~~~~~~ 300 (304)
|+.+.. .+++|+.|++.+++.
T Consensus 336 lyvad~~~~~~I~~~~~~~G~v 357 (409)
T 3hrp_A 336 FYIVDGFKGYCLRKLDILDGYV 357 (409)
T ss_dssp EEEEETTTTCEEEEEETTTTEE
T ss_pred EEEEeCCCCCEEEEEECCCCEE
Confidence 555554 578999999777653
No 201
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.52 E-value=1.3e-10 Score=91.50 Aligned_cols=197 Identities=10% Similarity=0.064 Sum_probs=133.1
Q ss_pred CCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEee-cCCeEEEEeecCccceeCCC
Q 022019 59 PNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVT-EGESVYDFCWFPHMSASDPT 137 (304)
Q Consensus 59 h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~ 137 (304)
+...+.+++++++|..+++...++.|..|+.. +... . .... ....+..+++ +++
T Consensus 55 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~-~----------------~~~~~~~~~~~~i~~-------~~~ 109 (299)
T 2z2n_A 55 PDAKVMCLTISSDGEVWFTENAANKIGRITKK-GIIK-E----------------YTLPNPDSAPYGITE-------GPN 109 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-E----------------EECSSTTCCEEEEEE-------CTT
T ss_pred ccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEE-E----------------EeCCCcCCCceeeEE-------CCC
Confidence 45779999999999988887778899999875 2110 0 0000 1233444544 778
Q ss_pred ccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeec
Q 022019 138 SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKG 216 (304)
Q Consensus 138 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~ 216 (304)
+.++++...++.|..||. +++.... .... ....+.+++++++++.+++. .++.|..||. .. . ... ..
T Consensus 110 g~l~v~~~~~~~i~~~d~-~g~~~~~-~~~~---~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g-~-~~~---~~- 177 (299)
T 2z2n_A 110 GDIWFTEMNGNRIGRITD-DGKIREY-ELPN---KGSYPSFITLGSDNALWFTENQNNAIGRITE-SG-D-ITE---FK- 177 (299)
T ss_dssp SCEEEEETTTTEEEEECT-TCCEEEE-ECSS---TTCCEEEEEECTTSCEEEEETTTTEEEEECT-TC-C-EEE---EE-
T ss_pred CCEEEEecCCceEEEECC-CCCEEEe-cCCC---CCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CC-c-EEE---ee-
Confidence 888888777888999998 5544322 2111 11267899999999887776 6789999998 32 1 111 11
Q ss_pred cccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeE-EeccccCCeEEEEECCCCcEEEEeeccCCeEEEEec
Q 022019 217 NKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLY-VLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDL 295 (304)
Q Consensus 217 ~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~ 295 (304)
.......+.++++++ ++.++++...++.|.+||. +++... .+..+...+.+++++++|...++.. .++.|..||.
T Consensus 178 -~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~~~~i~~~d~ 253 (299)
T 2z2n_A 178 -IPTPASGPVGITKGN-DDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEW-GANKIGRLTS 253 (299)
T ss_dssp -CSSTTCCEEEEEECT-TSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEET-TTTEEEEEET
T ss_pred -CCCCCCcceeEEECC-CCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEecc-CCceEEEECC
Confidence 112234578999999 5667766666889999998 555332 2333456789999999998666665 6789999998
Q ss_pred c
Q 022019 296 R 296 (304)
Q Consensus 296 ~ 296 (304)
.
T Consensus 254 ~ 254 (299)
T 2z2n_A 254 N 254 (299)
T ss_dssp T
T ss_pred C
Confidence 3
No 202
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.51 E-value=2.5e-12 Score=113.46 Aligned_cols=202 Identities=10% Similarity=0.005 Sum_probs=129.2
Q ss_pred eEEEEcCCCCeEEEecCCCe-------------EEEeeCCCCCCccccccccccccCCccceEEEee--cCCeEEEEeec
Q 022019 64 KGIKWSPDGSSFLTSSEDKT-------------LRIFSLPENGISYDVNACSLAKDQDSYEASLVVT--EGESVYDFCWF 128 (304)
Q Consensus 64 ~~i~~s~~~~~l~s~~~dg~-------------v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~ 128 (304)
..++|+|||+.|+.++.|.. |++|++.++.... ..+... +...+..+.|
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~---------------~lv~~~~~~~~~~~~~~~- 234 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKD---------------TVVHERTGDPTTFLQSDL- 234 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGC---------------EEEECCCCCTTCEEEEEE-
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhc---------------eEEEecCCCCEEEEEEEE-
Confidence 68999999999999988776 9999987553210 001111 1234555655
Q ss_pred CccceeCCCccEEEEEeCCC----CEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEc----CCeEEEEE
Q 022019 129 PHMSASDPTSCVFASTTRDH----PIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGY----NKSVRVFD 200 (304)
Q Consensus 129 ~~~~~~~~~~~~l~~~~~dg----~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~----d~~i~v~d 200 (304)
+|+|++|+.++.++ .|++++..+++... +..+.. .+....+ ++|.+++.+. ++.|.+||
T Consensus 235 ------SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~-l~~~~~-----~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d 301 (695)
T 2bkl_A 235 ------SRDGKYLFVYILRGWSENDVYWKRPGEKDFRL-LVKGVG-----AKYEVHA-WKDRFYVLTDEGAPRQRVFEVD 301 (695)
T ss_dssp ------CTTSCCEEEEEEETTTEEEEEEECTTCSSCEE-EEECSS-----CCEEEEE-ETTEEEEEECTTCTTCEEEEEB
T ss_pred ------CCCCCEEEEEEeCCCCceEEEEEcCCCCceEE-eecCCC-----ceEEEEe-cCCcEEEEECCCCCCCEEEEEe
Confidence 88999988887665 67777765554433 332222 4445556 5666333442 57899999
Q ss_pred cCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecC-CceEeEEeccc-cCCeEEEEECCCCc
Q 022019 201 VHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED-NMELLYVLHGQ-EGGVTHVQFSRDGN 278 (304)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~-~~~v~~~~~~~~~~ 278 (304)
+..+... .+..+.. ......+..++|+ ++.++++...|+..+||.+. .++....+..+ .+.+..++++|++.
T Consensus 302 ~~~~~~~--~~~~l~~--~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~ 375 (695)
T 2bkl_A 302 PAKPARA--SWKEIVP--EDSSASLLSVSIV--GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLD 375 (695)
T ss_dssp TTBCSGG--GCEEEEC--CCSSCEEEEEEEE--TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCS
T ss_pred CCCCCcc--CCeEEec--CCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCC
Confidence 8764210 0111211 1113457778887 46688999999988887654 35555666654 56788899999998
Q ss_pred EEEEee---ccCCeEEEEeccccee
Q 022019 279 YLYTGG---RKDPYILCWDLRKAVQ 300 (304)
Q Consensus 279 ~l~~~~---~~d~~i~vwd~~~~~~ 300 (304)
.|+... ...++|++||+.+++.
T Consensus 376 ~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 376 DAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp EEEEEEEETTEEEEEEEEETTTCCE
T ss_pred EEEEEEcCCCCCCEEEEEECCCCcE
Confidence 776333 1457899999988764
No 203
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.50 E-value=5.6e-12 Score=112.01 Aligned_cols=198 Identities=10% Similarity=0.004 Sum_probs=121.3
Q ss_pred CCCceeEEEEcCCCCeEEEecCC-----CeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccce
Q 022019 59 PNNFLKGIKWSPDGSSFLTSSED-----KTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSA 133 (304)
Q Consensus 59 h~~~V~~i~~s~~~~~l~s~~~d-----g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 133 (304)
|...+..++|||||++||.++.+ ..|++||+.+++... ... ....+..++
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~-----------------~~~-~~~~~~~~~------- 215 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLA-----------------DEL-KWVKFSGLA------- 215 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEE-----------------EEE-EEEESCCCE-------
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCC-----------------ccC-CCceeccEE-------
Confidence 44478899999999999877543 469999998764311 000 001112344
Q ss_pred eCCCccEEEEEeCCCC--------------EEEEEcCCCee--eEEeecccccccccceEEEEECCCCcEEE-EEcC---
Q 022019 134 SDPTSCVFASTTRDHP--------------IHLWDATTGLL--RCTYRAYDAVDEITAAFSVAFNPTGTKIF-AGYN--- 193 (304)
Q Consensus 134 ~~~~~~~l~~~~~dg~--------------i~i~d~~~~~~--~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~~d--- 193 (304)
|+|| +.|+.++.++. |++|++.++.. ...+.... +...+.++.|+|||++|+ ++.+
T Consensus 216 wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~---~~~~~~~~~~SpDG~~l~~~~~~~~~ 291 (741)
T 1yr2_A 216 WLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPE---LPKRGHGASVSSDGRWVVITSSEGTD 291 (741)
T ss_dssp ESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTT---CTTCEEEEEECTTSCEEEEEEECTTC
T ss_pred EECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCC---CCeEEEEEEECCCCCEEEEEEEccCC
Confidence 4889 88888877654 88999877653 22222211 112478999999999888 4443
Q ss_pred --CeEEEEEcCCCCcc-ceeeeeeeccccccccceeEEEeecCCCcEEEEEec----CCeEEEEecCCc--eEeEEeccc
Q 022019 194 --KSVRVFDVHRPGRD-FEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSY----SQTSAIYREDNM--ELLYVLHGQ 264 (304)
Q Consensus 194 --~~i~v~d~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~----dg~i~i~d~~~~--~~~~~~~~~ 264 (304)
..|++||+..+... . ..+.. +....... ++|+++ .|+..+. ++.|.+||+.++ .....+..+
T Consensus 292 ~~~~l~~~d~~~~~~~~~---~~l~~----~~~~~~~~-~~~dg~-~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~ 362 (741)
T 1yr2_A 292 PVNTVHVARVTNGKIGPV---TALIP----DLKAQWDF-VDGVGD-QLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPES 362 (741)
T ss_dssp SCCEEEEEEEETTEECCC---EEEEC----SSSSCEEE-EEEETT-EEEEEECTTCTTCEEEEEECSSSSCEEEEEECCC
T ss_pred CcceEEEEECCCCCCccc---EEecC----CCCceEEE-EeccCC-EEEEEECCCCCCCEEEEEeCCCCccccEEEecCC
Confidence 38999999763111 2 22221 12223333 347444 5555544 456999999874 344444455
Q ss_pred cCCeEEEEECCCCcEEEEeeccCCeEEEEecc
Q 022019 265 EGGVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 265 ~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~ 296 (304)
...+..+.|+ ++.++++.. .|+..+||.+.
T Consensus 363 ~~~l~~~~~~-~~~lv~~~~-~dg~~~l~~~~ 392 (741)
T 1yr2_A 363 KDNLESVGIA-GNRLFASYI-HDAKSQVLAFD 392 (741)
T ss_dssp SSEEEEEEEE-BTEEEEEEE-ETTEEEEEEEE
T ss_pred CCeEEEEEEE-CCEEEEEEE-ECCEEEEEEEe
Confidence 5567778887 566677777 89988777664
No 204
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.48 E-value=9.6e-12 Score=100.30 Aligned_cols=180 Identities=9% Similarity=0.112 Sum_probs=111.6
Q ss_pred eeEEEEcCCCCeEEEecCC---------------------------CeEEEeeCCCCCCccccccccccccCCccceEEE
Q 022019 63 LKGIKWSPDGSSFLTSSED---------------------------KTLRIFSLPENGISYDVNACSLAKDQDSYEASLV 115 (304)
Q Consensus 63 V~~i~~s~~~~~l~s~~~d---------------------------g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (304)
+..++|+|||+.|+.++.+ ..|.+||+.+++.. ..+.
T Consensus 106 ~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~----------------~~l~ 169 (347)
T 2gop_A 106 IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVI----------------EEFE 169 (347)
T ss_dssp EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEE----------------EEEE
T ss_pred ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEE----------------eeec
Confidence 8999999999988887632 46777887644210 0111
Q ss_pred eecCCeEEEEeecCccceeCCCccEEEEEeCCC-------CEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEE
Q 022019 116 VTEGESVYDFCWFPHMSASDPTSCVFASTTRDH-------PIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKI 188 (304)
Q Consensus 116 ~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg-------~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l 188 (304)
. . .+..+.| +|+| +++++..++ ...||.+.+++... +... . .+..+ +|+|+.|
T Consensus 170 ~--~-~~~~~~~-------spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-l~~~-~-----~~~~~--spdg~~l 229 (347)
T 2gop_A 170 K--P-RFSSGIW-------HRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEEK-MFEK-V-----SFYAV--DSDGERI 229 (347)
T ss_dssp E--E-TTCEEEE-------ETTE-EEEEEECCCSSCCSSCCEEEEEEETTEEEE-EEEE-E-----SEEEE--EECSSCE
T ss_pred C--C-CcccccC-------CCCe-EEEEEecccccccccccccEEEeCCCceEE-eccC-c-----ceeeE--CCCCCEE
Confidence 1 1 3334444 7888 777776542 33454444554433 2222 1 44444 8999988
Q ss_pred E-EEcC--------CeEEEEEcCCCCccceeeeeeeccccccccceeE-EEeecCCCcEEEEEecCCeEEEEecCCceEe
Q 022019 189 F-AGYN--------KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSA-IAFSPTHTGMLAIGSYSQTSAIYREDNMELL 258 (304)
Q Consensus 189 ~-~~~d--------~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~ 258 (304)
+ ++.+ ..|.+|| . +. . ..+ ...+...+.. +.|+ + + ++++++.++.++|| +.+++..
T Consensus 230 ~~~~~~~~~~~~~~~~l~~~d--~-~~-~---~~l---~~~~~~~~~~~~~~s-d-g-~~~~~~~~~~~~l~-~~~g~~~ 295 (347)
T 2gop_A 230 LLYGKPEKKYMSEHNKLYIYD--G-KE-V---MGI---LDEVDRGVGQAKIKD-G-K-VYFTLFEEGSVNLY-IWDGEIK 295 (347)
T ss_dssp EEEECCSSSCCCSSCEEEEEC--S-SC-E---EES---STTCCSEEEEEEEET-T-E-EEEEEEETTEEEEE-EESSSEE
T ss_pred EEEEccccCCccccceEEEEC--C-Cc-e---Eec---cccCCcccCCccEEc-C-c-EEEEEecCCcEEEE-EcCCceE
Confidence 7 4433 3677777 2 11 1 111 1344556775 8898 4 4 88999999999999 8765554
Q ss_pred EEeccccCCeEEEEECCCCcEEEEeeccCCeE-EEEecc
Q 022019 259 YVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYI-LCWDLR 296 (304)
Q Consensus 259 ~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i-~vwd~~ 296 (304)
. +..+...|.+++|+| .++++++ .++.. .+|.+.
T Consensus 296 ~-~~~~~~~v~~~~~s~--~~~~~~~-~~~~~~~l~~~~ 330 (347)
T 2gop_A 296 P-IAKGRHWIMGFDVDE--IVVYLKE-TATRLRELFTWD 330 (347)
T ss_dssp E-EECSSSEEEEEEESS--SEEEEEE-CSSSCCEEEEES
T ss_pred E-EecCCCeEEeeeeeC--cEEEEEc-CCCChHHheEeC
Confidence 3 334577899999999 6777776 55544 666664
No 205
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.48 E-value=6.2e-12 Score=110.79 Aligned_cols=204 Identities=10% Similarity=0.082 Sum_probs=129.3
Q ss_pred cCCCCceeEEEEcCCCCeEEE-----ecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcc
Q 022019 57 SIPNNFLKGIKWSPDGSSFLT-----SSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHM 131 (304)
Q Consensus 57 ~~h~~~V~~i~~s~~~~~l~s-----~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 131 (304)
.+|...+..++|||||++||- |+....|++||+.+++.... .. .......+
T Consensus 125 ~~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-----------------~~-~~~k~~~~------ 180 (693)
T 3iuj_A 125 PDGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-----------------PL-KDVKFSGI------ 180 (693)
T ss_dssp TTSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-----------------EE-EEEESCCC------
T ss_pred CCCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-----------------cc-CCceeccE------
Confidence 346668999999999998884 33346799999987643110 00 00001233
Q ss_pred ceeCCCccEEEEEeCCCC-------------EEEEEcCCCee--eEEeecccccccccceEEEEECCCCcEEEE-E----
Q 022019 132 SASDPTSCVFASTTRDHP-------------IHLWDATTGLL--RCTYRAYDAVDEITAAFSVAFNPTGTKIFA-G---- 191 (304)
Q Consensus 132 ~~~~~~~~~l~~~~~dg~-------------i~i~d~~~~~~--~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~-~---- 191 (304)
+|+ |++.|+.++.+.. |++|++.++.. ...+.... .+...+.++.|+|||++|+. .
T Consensus 181 -~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~--~~~~~~~~~~~SpDg~~l~~~~~~~~ 256 (693)
T 3iuj_A 181 -SWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIP--AQHHRYVGATVTEDDRFLLISAANST 256 (693)
T ss_dssp -EEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSG--GGCCSEEEEEECTTSCEEEEEEESSS
T ss_pred -EEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCC--CCCeEEEEEEEcCCCCEEEEEEccCC
Confidence 448 8888888887743 99999887653 22232211 01224678999999998873 2
Q ss_pred cCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecC---CeEEEEecCCceE--eEEeccccC
Q 022019 192 YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS---QTSAIYREDNMEL--LYVLHGQEG 266 (304)
Q Consensus 192 ~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d---g~i~i~d~~~~~~--~~~~~~~~~ 266 (304)
....|+++|+..+......+ . .+....... |+++++.+++....+ +.|..+|+.++.. ...+..|..
T Consensus 257 ~~~~i~~~d~~~~~~~~~~l---~----~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~ 328 (693)
T 3iuj_A 257 SGNRLYVKDLSQENAPLLTV---Q----GDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQ 328 (693)
T ss_dssp SCCEEEEEETTSTTCCCEEE---E----CSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS
T ss_pred CCcEEEEEECCCCCCceEEE---e----CCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCC
Confidence 22589999997653333222 1 122223333 566467676666554 6799999987654 345555666
Q ss_pred CeEEEEECCCCcEEEEeeccCC--eEEEEecccc
Q 022019 267 GVTHVQFSRDGNYLYTGGRKDP--YILCWDLRKA 298 (304)
Q Consensus 267 ~v~~~~~~~~~~~l~~~~~~d~--~i~vwd~~~~ 298 (304)
.+. .|++++.+|+.....++ .|.+|++..+
T Consensus 329 ~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~ 360 (693)
T 3iuj_A 329 QVL--TVHSGSGYLFAEYMVDATARVEQFDYEGK 360 (693)
T ss_dssp SCE--EEEEETTEEEEEEEETTEEEEEEECTTSC
T ss_pred CEE--EEEEECCEEEEEEEECCeeEEEEEECCCC
Confidence 555 89999998887774555 6889998754
No 206
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.46 E-value=4.2e-13 Score=108.43 Aligned_cols=145 Identities=10% Similarity=0.024 Sum_probs=102.2
Q ss_pred eeCCCccEEEEEeCCCCEEEEEcCCCeeeE-----EeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCcc
Q 022019 133 ASDPTSCVFASTTRDHPIHLWDATTGLLRC-----TYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRD 207 (304)
Q Consensus 133 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~-----~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~ 207 (304)
++++...++++|+.++ +.+|++.+..... .+......... .|+.++| +++.|+++.++.|++||++....
T Consensus 44 ais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp-~V~~l~f--d~~~L~v~~~~~l~v~dv~sl~~- 118 (388)
T 1xip_A 44 DISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIP-DVIFVCF--HGDQVLVSTRNALYSLDLEELSE- 118 (388)
T ss_dssp EEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECT-TEEEEEE--ETTEEEEEESSEEEEEESSSTTC-
T ss_pred EEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCC-CeeEEEE--CCCEEEEEcCCcEEEEEchhhhc-
Confidence 4477888999999886 6679876432000 01100001122 3899999 89999988999999999986431
Q ss_pred ceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccC
Q 022019 208 FEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKD 287 (304)
Q Consensus 208 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d 287 (304)
.... ..+...+.++.+.+ . .+++++.||.|.+||+..+.... +...|++++|||+| ++.|. .|
T Consensus 119 ~~~~-------~~~~~~v~~i~~~~-p--~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~-~d 181 (388)
T 1xip_A 119 FRTV-------TSFEKPVFQLKNVN-N--TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLL-KD 181 (388)
T ss_dssp EEEE-------EECSSCEEEEEECS-S--EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEE-TT
T ss_pred cCcc-------ceeecceeeEEecC-C--CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEE-cC
Confidence 1111 23344577777766 3 28889999999999999777643 45689999999999 66677 89
Q ss_pred CeEEEEecccce
Q 022019 288 PYILCWDLRKAV 299 (304)
Q Consensus 288 ~~i~vwd~~~~~ 299 (304)
|.+++|+...++
T Consensus 182 g~i~~~~~~~~~ 193 (388)
T 1xip_A 182 RSFQSFAWRNGE 193 (388)
T ss_dssp SCEEEEEEETTE
T ss_pred CcEEEEcCCCcc
Confidence 999999887765
No 207
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.43 E-value=4.7e-10 Score=89.66 Aligned_cols=197 Identities=15% Similarity=0.128 Sum_probs=123.9
Q ss_pred CceeEEEEcCCC-CeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCcc
Q 022019 61 NFLKGIKWSPDG-SSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSC 139 (304)
Q Consensus 61 ~~V~~i~~s~~~-~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 139 (304)
....+..|+|++ .++++...++.|.+||..++... .......+.++.| +++|+
T Consensus 49 ~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-------------------~~~~~~~v~~i~~-------~~dg~ 102 (326)
T 2ghs_A 49 LLGEGPTFDPASGTAWWFNILERELHELHLASGRKT-------------------VHALPFMGSALAK-------ISDSK 102 (326)
T ss_dssp SBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-------------------EEECSSCEEEEEE-------EETTE
T ss_pred CCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-------------------EEECCCcceEEEE-------eCCCe
Confidence 345688999974 45666667889999998754221 1112245666665 66887
Q ss_pred EEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEc-------CCeEEEEEcCCCCccceeee
Q 022019 140 VFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGY-------NKSVRVFDVHRPGRDFEKYS 212 (304)
Q Consensus 140 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~-------d~~i~v~d~~~~~~~~~~~~ 212 (304)
++++. .++ |.+||..+++.......... .....+..+.++|+|+++++.. .+.|..++ . +. ..
T Consensus 103 l~v~~-~~g-l~~~d~~~g~~~~~~~~~~~-~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~-g~-~~--- 172 (326)
T 2ghs_A 103 QLIAS-DDG-LFLRDTATGVLTLHAELESD-LPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--K-GK-VT--- 172 (326)
T ss_dssp EEEEE-TTE-EEEEETTTCCEEEEECSSTT-CTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--T-TE-EE---
T ss_pred EEEEE-CCC-EEEEECCCCcEEEEeeCCCC-CCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--C-Cc-EE---
Confidence 77654 444 99999988875433222111 1123688999999999777542 24555555 2 21 11
Q ss_pred eeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecC--Cc-e-----EeEEeccccCCeEEEEECCCCcEEEEee
Q 022019 213 TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED--NM-E-----LLYVLHGQEGGVTHVQFSRDGNYLYTGG 284 (304)
Q Consensus 213 ~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~--~~-~-----~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 284 (304)
.+. ........++|+|++..++++.+.++.|.+||+. ++ . ....+.........++++++|.+.++..
T Consensus 173 ~~~----~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~ 248 (326)
T 2ghs_A 173 KLF----ADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARW 248 (326)
T ss_dssp EEE----EEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEE
T ss_pred Eee----CCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEe
Confidence 111 1122367899999544455666667899999985 45 2 2333333445678899999998777665
Q ss_pred ccCCeEEEEecccce
Q 022019 285 RKDPYILCWDLRKAV 299 (304)
Q Consensus 285 ~~d~~i~vwd~~~~~ 299 (304)
.++.|.+|+. +++
T Consensus 249 -~~~~v~~~d~-~g~ 261 (326)
T 2ghs_A 249 -GEGAVDRYDT-DGN 261 (326)
T ss_dssp -TTTEEEEECT-TCC
T ss_pred -CCCEEEEECC-CCC
Confidence 6788999998 444
No 208
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.42 E-value=2.3e-11 Score=98.00 Aligned_cols=213 Identities=11% Similarity=0.010 Sum_probs=119.6
Q ss_pred EEEEcCCCCeEEEec----------CCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 65 GIKWSPDGSSFLTSS----------EDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 65 ~i~~s~~~~~l~s~~----------~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
.+.++|||++++++. .++.|.+||+.+.+....+... ..... ..--.|..+++
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~----------------~~~~~-~~g~~P~~ia~ 131 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELP----------------DAPRF-SVGPRVHIIGN 131 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEET----------------TSCSC-CBSCCTTSEEE
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECC----------------Ccccc-ccCCCcceEEE
Confidence 799999999888875 3789999999977553332111 00000 00013666777
Q ss_pred CCCccEEEEEeC--CCCEEE--EEcCCCeeeEEeeccccc--ccccceEEEEE---------------------------
Q 022019 135 DPTSCVFASTTR--DHPIHL--WDATTGLLRCTYRAYDAV--DEITAAFSVAF--------------------------- 181 (304)
Q Consensus 135 ~~~~~~l~~~~~--dg~i~i--~d~~~~~~~~~~~~~~~~--~~~~~v~~i~~--------------------------- 181 (304)
+|||++++++.. +..+.+ +|+.+ ...+...... .....-.-+.+
T Consensus 132 SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~ 208 (368)
T 1mda_H 132 CASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTG 208 (368)
T ss_dssp CTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCT
T ss_pred cCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeee
Confidence 888888888764 346777 77755 2222211100 00000000111
Q ss_pred ----------CCCCcE-EEEEcCCeEEEEEcCCCCccceeeeeeecc------ccccccceeEEEeecCCCcEEEEEe--
Q 022019 182 ----------NPTGTK-IFAGYNKSVRVFDVHRPGRDFEKYSTLKGN------KEGQAGIMSAIAFSPTHTGMLAIGS-- 242 (304)
Q Consensus 182 ----------~~~~~~-l~~~~d~~i~v~d~~~~~~~~~~~~~~~~~------~~~~~~~v~~~~~~p~~~~~l~~~~-- 242 (304)
.+++.. ++++. +.+.+.|+....... ...+... ..........++++|++++++++..
T Consensus 209 ~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v--~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~ 285 (368)
T 1mda_H 209 AQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATM--KAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEH 285 (368)
T ss_dssp TSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEE--ECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEEC
T ss_pred eeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceE--EEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccc
Confidence 222222 22334 666666664321110 0111000 0000111223789995554444433
Q ss_pred -c-----CCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeec-cCCeEEEEecccceee
Q 022019 243 -Y-----SQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGR-KDPYILCWDLRKAVQV 301 (304)
Q Consensus 243 -~-----dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~d~~i~vwd~~~~~~~ 301 (304)
. ++.+.++|+.+.+.+..+.... ....+.|+|||++++.+.+ .++.|.++|+.+++.+
T Consensus 286 ~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv 350 (368)
T 1mda_H 286 SRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQ 350 (368)
T ss_dssp SSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEE
T ss_pred cCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEE
Confidence 1 2356699999999998887543 5789999999987666663 3899999999998765
No 209
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.42 E-value=1.8e-09 Score=84.97 Aligned_cols=198 Identities=10% Similarity=0.076 Sum_probs=131.9
Q ss_pred CCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEee-cCCeEEEEeecCccceeCC
Q 022019 58 IPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVT-EGESVYDFCWFPHMSASDP 136 (304)
Q Consensus 58 ~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~ 136 (304)
.+...+.++++.++|..+++...++.|..||.. +... . .... ....+..++ +++
T Consensus 59 ~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~-~----------------~~~~~~~~~~~~i~-------~~~ 113 (300)
T 2qc5_A 59 TPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFT-E----------------YPLPQPDSGPYGIT-------EGL 113 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-E----------------EECSSTTCCEEEEE-------ECS
T ss_pred CCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeE-E----------------ecCCCCCCCCccce-------ECC
Confidence 344679999999999988877778899999876 3221 0 0000 112344444 477
Q ss_pred CccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeee
Q 022019 137 TSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLK 215 (304)
Q Consensus 137 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~ 215 (304)
+++++++...++.|..+|.. ++... +.... ....+.+++++++++++++. .++.|..||.. . . ... ..
T Consensus 114 ~g~l~v~~~~~~~i~~~~~~-g~~~~-~~~~~---~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g-~-~~~---~~ 182 (300)
T 2qc5_A 114 NGDIWFTQLNGDRIGKLTAD-GTIYE-YDLPN---KGSYPAFITLGSDNALWFTENQNNSIGRITNT-G-K-LEE---YP 182 (300)
T ss_dssp TTCEEEEETTTTEEEEECTT-SCEEE-EECSS---TTCCEEEEEECTTSSEEEEETTTTEEEEECTT-C-C-EEE---EE
T ss_pred CCCEEEEccCCCeEEEECCC-CCEEE-ccCCC---CCCCceeEEECCCCCEEEEecCCCeEEEECCC-C-c-EEE---ee
Confidence 88888877778889999987 55442 22211 11267899999999966666 57889999983 2 1 111 11
Q ss_pred ccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeE-EeccccCCeEEEEECCCCcEEEEeeccCCeEEEEe
Q 022019 216 GNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLY-VLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWD 294 (304)
Q Consensus 216 ~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd 294 (304)
.......+..+++++ ++.++++....+.|.+||. +++... .+..+...+.+++++++|...++.. .++.|..|+
T Consensus 183 --~~~~~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~-~~~~i~~~~ 257 (300)
T 2qc5_A 183 --LPTNAAAPVGITSGN-DGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEW-GANQIGRIT 257 (300)
T ss_dssp --CSSTTCCEEEEEECT-TSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEET-TTTEEEEEC
T ss_pred --CCCCCCCcceEEECC-CCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEecc-CCCeEEEEC
Confidence 122334578999999 6667776666788999998 444322 2333456789999999998666655 678999999
Q ss_pred cc
Q 022019 295 LR 296 (304)
Q Consensus 295 ~~ 296 (304)
..
T Consensus 258 ~~ 259 (300)
T 2qc5_A 258 ND 259 (300)
T ss_dssp TT
T ss_pred CC
Confidence 83
No 210
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.41 E-value=1.1e-09 Score=86.23 Aligned_cols=197 Identities=12% Similarity=0.101 Sum_probs=132.5
Q ss_pred CCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEe-ecCCeEEEEeecCccceeCC
Q 022019 58 IPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVV-TEGESVYDFCWFPHMSASDP 136 (304)
Q Consensus 58 ~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~ 136 (304)
.....+.+++++++|..+++...++.|.+||.. +.... ... .....+..+++ ++
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~-----------------~~~~~~~~~~~~i~~-------~~ 71 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKE-----------------FEVPTPDAKVMCLIV-------SS 71 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE-----------------EECSSTTCCEEEEEE-------CT
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEE-----------------EECCCCCCcceeEEE-------CC
Confidence 345678999999999988877778999999976 33211 000 01133444444 77
Q ss_pred CccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeee
Q 022019 137 TSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLK 215 (304)
Q Consensus 137 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~ 215 (304)
+++++++...++.|..+|.. ++.. .+.... ....+.+++++++++++++. .++.|..||.. +. .. ...
T Consensus 72 ~g~l~v~~~~~~~v~~~d~~-g~~~-~~~~~~---~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~--~~---~~~ 140 (300)
T 2qc5_A 72 LGDIWFTENGANKIGKLSKK-GGFT-EYPLPQ---PDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GT--IY---EYD 140 (300)
T ss_dssp TSCEEEEETTTTEEEEECTT-SCEE-EEECSS---TTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SC--EE---EEE
T ss_pred CCCEEEEecCCCeEEEECCC-CCeE-EecCCC---CCCCCccceECCCCCEEEEccCCCeEEEECCC-CC--EE---Ecc
Confidence 88888777767889999987 5543 232221 11267899999999888776 57899999875 21 11 111
Q ss_pred ccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeE-EeccccCCeEEEEECCCCcEEEEeeccCCeEEEEe
Q 022019 216 GNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLY-VLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWD 294 (304)
Q Consensus 216 ~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd 294 (304)
.......+..++++| ++.++++...++.|..||. +++... ....+...+..++++++|...++.. ..+.|.+|+
T Consensus 141 --~~~~~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~-~~~~i~~~~ 215 (300)
T 2qc5_A 141 --LPNKGSYPAFITLGS-DNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEI-MGNKIGRIT 215 (300)
T ss_dssp --CSSTTCCEEEEEECT-TSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEET-TTTEEEEEC
T ss_pred --CCCCCCCceeEEECC-CCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEcc-CCCEEEEEc
Confidence 122234578999999 5666666666789999998 444332 2223445689999999998766665 677899999
Q ss_pred c
Q 022019 295 L 295 (304)
Q Consensus 295 ~ 295 (304)
.
T Consensus 216 ~ 216 (300)
T 2qc5_A 216 T 216 (300)
T ss_dssp T
T ss_pred C
Confidence 8
No 211
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.39 E-value=8.6e-11 Score=92.08 Aligned_cols=154 Identities=8% Similarity=0.152 Sum_probs=107.9
Q ss_pred ceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeeccc-ccccccceEEEEE-CCCCcEEEEE-c-CCeEEEEEcCCCCcc
Q 022019 132 SASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYD-AVDEITAAFSVAF-NPTGTKIFAG-Y-NKSVRVFDVHRPGRD 207 (304)
Q Consensus 132 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~~~~~~v~~i~~-~~~~~~l~~~-~-d~~i~v~d~~~~~~~ 207 (304)
++++++++++++...++.|.+||.. ++....+.... ...+...+.++++ .++++++++. . ++.|.+||... ..
T Consensus 35 v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g--~~ 111 (286)
T 1q7f_A 35 VAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYG--QF 111 (286)
T ss_dssp EEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTTS--CE
T ss_pred EEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEECCCC--cE
Confidence 3448889988888889999999987 55555443211 1112236789999 5777777766 3 89999999432 11
Q ss_pred ceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEec--cccCCeEEEEECCCCcEEEEeec
Q 022019 208 FEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH--GQEGGVTHVQFSRDGNYLYTGGR 285 (304)
Q Consensus 208 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~ 285 (304)
. ..+. ..+...+.+++++| ++.++++...++.|.+||.. ++.+..+. .+...+..++++|+|+++++..
T Consensus 112 ~---~~~~---~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~- 182 (286)
T 1q7f_A 112 V---RKFG---ATILQHPRGVTVDN-KGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDN- 182 (286)
T ss_dssp E---EEEC---TTTCSCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEG-
T ss_pred E---EEec---CccCCCceEEEEeC-CCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEEC-
Confidence 1 1111 12334578999999 66788877788999999964 55555553 3445689999999999777766
Q ss_pred cCCeEEEEeccc
Q 022019 286 KDPYILCWDLRK 297 (304)
Q Consensus 286 ~d~~i~vwd~~~ 297 (304)
.++.|++||...
T Consensus 183 ~~~~i~~~~~~g 194 (286)
T 1q7f_A 183 RAHCVKVFNYEG 194 (286)
T ss_dssp GGTEEEEEETTC
T ss_pred CCCEEEEEcCCC
Confidence 799999999854
No 212
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.39 E-value=1.4e-09 Score=86.86 Aligned_cols=192 Identities=14% Similarity=0.122 Sum_probs=118.1
Q ss_pred CCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCcc
Q 022019 60 NNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSC 139 (304)
Q Consensus 60 ~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 139 (304)
...+.++.|+|+|+++++. .+ .|.+||..++........ ... .....+.++.+ +|+|+
T Consensus 89 ~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~------~~~-------~~~~~~~~i~~-------d~~G~ 146 (326)
T 2ghs_A 89 PFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAEL------ESD-------LPGNRSNDGRM-------HPSGA 146 (326)
T ss_dssp SSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEECS------STT-------CTTEEEEEEEE-------CTTSC
T ss_pred CCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEeeC------CCC-------CCCCCCCCEEE-------CCCCC
Confidence 4579999999999877754 34 499999876543110000 000 00123455554 77888
Q ss_pred EEEEEeC------CCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-cCCeEEEEEcC-CCCcccee
Q 022019 140 VFASTTR------DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVH-RPGRDFEK 210 (304)
Q Consensus 140 ~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~v~d~~-~~~~~~~~ 210 (304)
++++... .+.|+.++ +++........ .....++|+|+++.++ +. .++.|.+||+. ..+.....
T Consensus 147 l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~------~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~ 218 (326)
T 2ghs_A 147 LWIGTMGRKAETGAGSIYHVA--KGKVTKLFADI------SIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGK 218 (326)
T ss_dssp EEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEE------SSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSC
T ss_pred EEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCC------cccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccC
Confidence 7765542 24556666 45543322111 1457899999998776 44 57899999986 11201110
Q ss_pred eeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEEC-CCCcEEEEee
Q 022019 211 YSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFS-RDGNYLYTGG 284 (304)
Q Consensus 211 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~ 284 (304)
...+.. .......+..+++++ ++.++++...++.|.+||. +++.+..+..+...+++++|+ |++..|+.++
T Consensus 219 ~~~~~~-~~~~~~~p~gi~~d~-~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 219 AEVFID-STGIKGGMDGSVCDA-EGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp CEEEEE-CTTSSSEEEEEEECT-TSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEE
T ss_pred ceEEEE-CCCCCCCCCeeEECC-CCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEEEEEe
Confidence 011111 112233467899999 5666666666789999998 577777777666679999998 8988776655
No 213
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.38 E-value=1.7e-10 Score=102.51 Aligned_cols=202 Identities=11% Similarity=0.096 Sum_probs=126.3
Q ss_pred eeEEEEcCCCCeEEEecCCCe--------------EEEeeCCCCCCccccccccccccCCccceEEEeecC--CeEEEEe
Q 022019 63 LKGIKWSPDGSSFLTSSEDKT--------------LRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEG--ESVYDFC 126 (304)
Q Consensus 63 V~~i~~s~~~~~l~s~~~dg~--------------v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~ 126 (304)
+..++|+|| +.|+.++.|+. |.+|++.++.... ..+..... ..+..+.
T Consensus 211 ~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~---------------~lv~~~~~~~~~~~~~~ 274 (741)
T 1yr2_A 211 FSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSAD---------------QPVFATPELPKRGHGAS 274 (741)
T ss_dssp SCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGC---------------EEEECCTTCTTCEEEEE
T ss_pred eccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhC---------------EEEeccCCCCeEEEEEE
Confidence 357899999 98888876654 7888876442100 00111111 1345555
Q ss_pred ecCccceeCCCccEEEEEeCCC-----CEEEEEcCCC--eeeEEeecccccccccceEEEEECCCCcEEE-EEc----CC
Q 022019 127 WFPHMSASDPTSCVFASTTRDH-----PIHLWDATTG--LLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AGY----NK 194 (304)
Q Consensus 127 ~~~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~--~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~~----d~ 194 (304)
| +|||++|+..+.++ .|++||+.++ +....+..... .+... ++|+|+.|+ .+. ++
T Consensus 275 ~-------SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~-----~~~~~-~~~dg~~l~~~s~~~~~~~ 341 (741)
T 1yr2_A 275 V-------SSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLK-----AQWDF-VDGVGDQLWFVSGDGAPLK 341 (741)
T ss_dssp E-------CTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSS-----SCEEE-EEEETTEEEEEECTTCTTC
T ss_pred E-------CCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCC-----ceEEE-EeccCCEEEEEECCCCCCC
Confidence 5 88999888877544 7999999877 31233333221 33333 348888877 443 35
Q ss_pred eEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecC-CceEeEEecc-ccCCeEEEE
Q 022019 195 SVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED-NMELLYVLHG-QEGGVTHVQ 272 (304)
Q Consensus 195 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~-~~~~v~~~~ 272 (304)
.|.+||+..+. .....+. ..+...+..+.|+ ++.++++...|+..+||.+. .++....+.. +.+.+..+.
T Consensus 342 ~l~~~d~~~~~---~~~~~l~---~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~ 413 (741)
T 1yr2_A 342 KIVRVDLSGST---PRFDTVV---PESKDNLESVGIA--GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLS 413 (741)
T ss_dssp EEEEEECSSSS---CEEEEEE---CCCSSEEEEEEEE--BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEE
T ss_pred EEEEEeCCCCc---cccEEEe---cCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEee
Confidence 69999987532 1112222 2233446677776 45688889999987777554 4555566654 356789999
Q ss_pred ECCCCcEEEEee---ccCCeEEEEecccceee
Q 022019 273 FSRDGNYLYTGG---RKDPYILCWDLRKAVQV 301 (304)
Q Consensus 273 ~~~~~~~l~~~~---~~d~~i~vwd~~~~~~~ 301 (304)
++|++..|+... ...++|++||+.+++..
T Consensus 414 ~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~ 445 (741)
T 1yr2_A 414 GRPGDRHAYLSFSSFTQPATVLALDPATAKTT 445 (741)
T ss_dssp CCBTCSCEEEEEEETTEEEEEEEEETTTTEEE
T ss_pred cCCCCCEEEEEEcCCCCCCEEEEEECCCCcEE
Confidence 999998666332 14578999999887643
No 214
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.38 E-value=3.5e-10 Score=89.56 Aligned_cols=200 Identities=10% Similarity=0.085 Sum_probs=123.7
Q ss_pred eecCCCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
.+..+...+.+++++++|+++++...++.|.+|+.. +.... +....... -.-.|..+++
T Consensus 80 ~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~-----------------~~~~~~~~---~~~~~~~i~~ 138 (305)
T 3dr2_A 80 VLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHL-----------------LVGRYAGK---RLNSPNDLIV 138 (305)
T ss_dssp EEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE-----------------EECEETTE---ECSCCCCEEE
T ss_pred EEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEE-----------------EEeccCCC---ccCCCCCEEE
Confidence 344456778999999999977766666889999875 32110 00000000 0012334455
Q ss_pred CCCccEEEE----EeC-------------CCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cC---
Q 022019 135 DPTSCVFAS----TTR-------------DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YN--- 193 (304)
Q Consensus 135 ~~~~~~l~~----~~~-------------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d--- 193 (304)
+++|+++++ |.. .+.|+.+|..+++..... ... ....++|+|+++.|+++ ..
T Consensus 139 d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~------~p~gl~~spdg~~lyv~~~~~~~ 211 (305)
T 3dr2_A 139 ARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLD------HPNGLAFSPDEQTLYVSQTPEQG 211 (305)
T ss_dssp CTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EES------SEEEEEECTTSSEEEEEECCC--
T ss_pred CCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCC------CCcceEEcCCCCEEEEEecCCcC
Confidence 889998886 332 245777777666654432 111 56789999999987754 43
Q ss_pred ---CeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEE
Q 022019 194 ---KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTH 270 (304)
Q Consensus 194 ---~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~ 270 (304)
+.|.+||+.... ......+.. .....+..+++++ ++.+ .+++.+ .|.+|+. .++.+..+..+. .+.+
T Consensus 212 ~~~~~i~~~~~~~~~--l~~~~~~~~---~~~~~pdgi~~d~-~G~l-wv~~~~-gv~~~~~-~g~~~~~~~~~~-~~~~ 281 (305)
T 3dr2_A 212 HGSVEITAFAWRDGA--LHDRRHFAS---VPDGLPDGFCVDR-GGWL-WSSSGT-GVCVFDS-DGQLLGHIPTPG-TASN 281 (305)
T ss_dssp -CCCEEEEEEEETTE--EEEEEEEEC---CSSSCCCSEEECT-TSCE-EECCSS-EEEEECT-TSCEEEEEECSS-CCCE
T ss_pred CCCCEEEEEEecCCC--ccCCeEEEE---CCCCCCCeEEECC-CCCE-EEecCC-cEEEECC-CCCEEEEEECCC-ceeE
Confidence 789999987532 111111111 1123356789999 5654 444444 5999998 566777776554 5899
Q ss_pred EEECCCCcEEEEeeccCCeEEEEe
Q 022019 271 VQFSRDGNYLYTGGRKDPYILCWD 294 (304)
Q Consensus 271 ~~~~~~~~~l~~~~~~d~~i~vwd 294 (304)
++|+|+++.|+.++ .++ |..++
T Consensus 282 ~~f~~d~~~L~it~-~~~-l~~~~ 303 (305)
T 3dr2_A 282 CTFDQAQQRLFITG-GPC-LWMLP 303 (305)
T ss_dssp EEECTTSCEEEEEE-TTE-EEEEE
T ss_pred EEEeCCCCEEEEEc-CCe-EEEEE
Confidence 99999999998887 553 44333
No 215
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.32 E-value=1.2e-09 Score=86.44 Aligned_cols=200 Identities=13% Similarity=0.137 Sum_probs=122.4
Q ss_pred eecCCCCceeEEEEcCCCC-eEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccce
Q 022019 55 TSSIPNNFLKGIKWSPDGS-SFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSA 133 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~-~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 133 (304)
.+..+.....+..|+|+|+ ++++...++.|..|+.. +.. .........+..+.+
T Consensus 39 ~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~~------------------~~~~~~~~~~~gl~~------ 93 (305)
T 3dr2_A 39 TLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GTV------------------DVLLDATAFTNGNAV------ 93 (305)
T ss_dssp EEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SCE------------------EEEEESCSCEEEEEE------
T ss_pred EEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CCE------------------EEEeCCCCccceeeE------
Confidence 4445566778999999998 56777788999999873 221 011122234455544
Q ss_pred eCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEE----Ec--------------CCe
Q 022019 134 SDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA----GY--------------NKS 195 (304)
Q Consensus 134 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~----~~--------------d~~ 195 (304)
+++|+++++...++.|.+|+.. ++.......... .....+..++++|+|+++++ |. .+.
T Consensus 94 -d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~-~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~ 170 (305)
T 3dr2_A 94 -DAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAG-KRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHS 170 (305)
T ss_dssp -CTTSCEEEEETTTTEEEEECTT-SCEEEEECEETT-EECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEE
T ss_pred -CCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCC-CccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCe
Confidence 7899877766666789999976 554322221111 11225678999999998875 31 245
Q ss_pred EEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecC------CeEEEEecCCceE--eEEe-ccccC
Q 022019 196 VRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS------QTSAIYREDNMEL--LYVL-HGQEG 266 (304)
Q Consensus 196 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d------g~i~i~d~~~~~~--~~~~-~~~~~ 266 (304)
|+.||...+. ...+. .......++|+| ++..|+++... +.|++|++..... ...+ .....
T Consensus 171 v~~~d~~~g~--~~~~~--------~~~~p~gl~~sp-dg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~ 239 (305)
T 3dr2_A 171 VYRLPPDGSP--LQRMA--------DLDHPNGLAFSP-DEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDG 239 (305)
T ss_dssp EEEECSSSCC--CEEEE--------EESSEEEEEECT-TSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSS
T ss_pred EEEEcCCCCc--EEEEe--------cCCCCcceEEcC-CCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCC
Confidence 7777764421 11111 122357899999 55555555444 7899999875431 1111 11233
Q ss_pred CeEEEEECCCCcEEEEeeccCCeEEEEecc
Q 022019 267 GVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 267 ~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~ 296 (304)
....++++++|+ |.++. .+| |.+|+..
T Consensus 240 ~pdgi~~d~~G~-lwv~~-~~g-v~~~~~~ 266 (305)
T 3dr2_A 240 LPDGFCVDRGGW-LWSSS-GTG-VCVFDSD 266 (305)
T ss_dssp CCCSEEECTTSC-EEECC-SSE-EEEECTT
T ss_pred CCCeEEECCCCC-EEEec-CCc-EEEECCC
Confidence 456789999998 55555 454 9999984
No 216
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.32 E-value=5.7e-09 Score=79.71 Aligned_cols=200 Identities=9% Similarity=0.072 Sum_probs=129.8
Q ss_pred ceeEEEEcCCCCeEEEecC--CCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCcc
Q 022019 62 FLKGIKWSPDGSSFLTSSE--DKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSC 139 (304)
Q Consensus 62 ~V~~i~~s~~~~~l~s~~~--dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 139 (304)
....+.|++++.++++.+. ++.|+++|+.+++....... ........+.+ . .+.
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l----------------~~~~fgeGi~~-------~-g~~ 77 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKM----------------DDSYFGEGLTL-------L-NEK 77 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEEC----------------CTTCCEEEEEE-------E-TTE
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEec----------------CCCcceEEEEE-------e-CCE
Confidence 4689999998765555543 67999999998765433221 11111112222 1 224
Q ss_pred EEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeeccc
Q 022019 140 VFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNK 218 (304)
Q Consensus 140 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~ 218 (304)
++++.-.++.+.++|..+.+.+.++... . . . ...++++|+.++++ .++.|.++|..+.. .. ..+.-..
T Consensus 78 lyv~t~~~~~v~viD~~t~~v~~~i~~g-~-~---~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~-v~---~~I~Vg~ 146 (266)
T 2iwa_A 78 LYQVVWLKNIGFIYDRRTLSNIKNFTHQ-M-K---D--GWGLATDGKILYGSDGTSILYEIDPHTFK-LI---KKHNVKY 146 (266)
T ss_dssp EEEEETTCSEEEEEETTTTEEEEEEECC-S-S---S--CCEEEECSSSEEEECSSSEEEEECTTTCC-EE---EEEECEE
T ss_pred EEEEEecCCEEEEEECCCCcEEEEEECC-C-C---C--eEEEEECCCEEEEECCCCeEEEEECCCCc-EE---EEEEECC
Confidence 4555557889999999999988887654 1 1 1 23345577777765 78899999987632 11 2221110
Q ss_pred cc-cccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEecccc-------------CCeEEEEECCCCcEEEEee
Q 022019 219 EG-QAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQE-------------GGVTHVQFSRDGNYLYTGG 284 (304)
Q Consensus 219 ~~-~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-------------~~v~~~~~~~~~~~l~~~~ 284 (304)
.+ ....+..+.|. ++.+++....++.|.+.|..+++.+..+.... .....++|+|+++.|+.++
T Consensus 147 ~~~p~~~~nele~~--dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTg 224 (266)
T 2iwa_A 147 NGHRVIRLNELEYI--NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTG 224 (266)
T ss_dssp TTEECCCEEEEEEE--TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEE
T ss_pred CCcccccceeEEEE--CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEEC
Confidence 11 11235677887 34566666568899999999999888886321 2568999999998777666
Q ss_pred ccCCeEEEEecccc
Q 022019 285 RKDPYILCWDLRKA 298 (304)
Q Consensus 285 ~~d~~i~vwd~~~~ 298 (304)
...+.|.+.++...
T Consensus 225 k~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 225 KLWPKLFEIKLHLV 238 (266)
T ss_dssp TTCSEEEEEEEEEC
T ss_pred CCCCeEEEEEEecc
Confidence 57889999988764
No 217
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.30 E-value=7.7e-09 Score=85.16 Aligned_cols=200 Identities=8% Similarity=0.006 Sum_probs=122.4
Q ss_pred EEEcCCCCeEEEecCCC--eEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEE
Q 022019 66 IKWSPDGSSFLTSSEDK--TLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFAS 143 (304)
Q Consensus 66 i~~s~~~~~l~s~~~dg--~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~ 143 (304)
++|+|+++.|+++..++ .|.+++.......... -..... ..-.|..++++|++..|++
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~---------------g~~~~~-----~~~~p~~iav~p~~g~lyv 235 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRI---------------GQLGST-----FSGKIGAVALDETEEWLYF 235 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEE---------------EECCTT-----SCSCCCBCEECTTSSEEEE
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEe---------------eeccch-----hcCCcEEEEEeCCCCeEEE
Confidence 89999999888888766 7888876533210000 000000 0123455566884444444
Q ss_pred EeCCCCEEEEEcCCCeeeEEeeccccccccc-ceE-EEEECCCCcEEE-EE-cCCeEEEEEcCCCCccceeeeeeeccc-
Q 022019 144 TTRDHPIHLWDATTGLLRCTYRAYDAVDEIT-AAF-SVAFNPTGTKIF-AG-YNKSVRVFDVHRPGRDFEKYSTLKGNK- 218 (304)
Q Consensus 144 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~-~v~-~i~~~~~~~~l~-~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~- 218 (304)
+..++.|+.||..++.... +.......... ... .++|+|++..|+ +. .++.|+.|+.... . ..+....
T Consensus 236 ~d~~~~I~~~d~~~~~~~~-~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~---~---~~~~g~~~ 308 (409)
T 3hrp_A 236 VDSNKNFGRFNVKTQEVTL-IKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE---C---EWFCGSAT 308 (409)
T ss_dssp ECTTCEEEEEETTTCCEEE-EEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC---E---EEEEECTT
T ss_pred EECCCcEEEEECCCCCEEE-EecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC---E---EEEEeCCC
Confidence 7778899999998765322 21100001111 113 899999654444 54 7889999987642 1 1111100
Q ss_pred ----------cccccceeEEEeecCCCcEEEEEe-cCCeEEEEecCCceEeEEeccc---------------cCCeEEEE
Q 022019 219 ----------EGQAGIMSAIAFSPTHTGMLAIGS-YSQTSAIYREDNMELLYVLHGQ---------------EGGVTHVQ 272 (304)
Q Consensus 219 ----------~~~~~~v~~~~~~p~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~---------------~~~v~~~~ 272 (304)
.........++++| ++.++++-+ .++.|+.||+.++.. .++.++ -.....++
T Consensus 309 ~~g~~dg~~~~~~~~~P~gia~d~-dG~lyvad~~~~~~I~~~~~~~G~v-~~~~g~~~~~g~~~g~~~~~~~~~P~gia 386 (409)
T 3hrp_A 309 QKTVQDGLREEALFAQPNGMTVDE-DGNFYIVDGFKGYCLRKLDILDGYV-STVAGQVDVASQIDGTPLEATFNYPYDIC 386 (409)
T ss_dssp CCSCBCEEGGGCBCSSEEEEEECT-TCCEEEEETTTTCEEEEEETTTTEE-EEEEECTTCBSCCCBSTTTCCBSSEEEEE
T ss_pred CCCcCCCcccccEeCCCeEEEEeC-CCCEEEEeCCCCCEEEEEECCCCEE-EEEeCCCCCCCcCCCChhceEeCCceEEE
Confidence 01123478999999 566777777 889999999777764 334333 23578999
Q ss_pred ECCCCcEEEEeeccCCeEEEEec
Q 022019 273 FSRDGNYLYTGGRKDPYILCWDL 295 (304)
Q Consensus 273 ~~~~~~~l~~~~~~d~~i~vwd~ 295 (304)
++|+|.++++-. .+++|+.+++
T Consensus 387 vd~~g~lyVad~-~n~~Ir~i~~ 408 (409)
T 3hrp_A 387 YDGEGGYWIAEA-WGKAIRKYAV 408 (409)
T ss_dssp ECSSSEEEEEES-TTCEEEEEEE
T ss_pred EcCCCCEEEEEC-CCCeEEEEEe
Confidence 999987777666 8889988876
No 218
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.27 E-value=9.8e-10 Score=88.46 Aligned_cols=218 Identities=12% Similarity=0.079 Sum_probs=125.6
Q ss_pred CceeEEEEcCCCCeEEEec--CCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCc
Q 022019 61 NFLKGIKWSPDGSSFLTSS--EDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS 138 (304)
Q Consensus 61 ~~V~~i~~s~~~~~l~s~~--~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 138 (304)
..+..++++|+|+.+++.. .++.++||.+.++... ...... . ....+-..+..++ +++++
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~-----~-----~~~~~~~~p~gv~-------~d~~g 78 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQS-----G-----NAIITFDTVLGIK-------SDGNG 78 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCC-----S-----SCCCCCSCEEEEE-------ECSSS
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcc-----c-----CcccceeEeeEEE-------EcCCC
Confidence 6789999999999988864 2343566665432211 000000 0 0001123444554 47888
Q ss_pred cEEEEEeC-----CCCEEEEEcCCCeeeEEeecccc-cccccceEEEEECCCCcEEEEE-----cCCeEEEEEcCCCCcc
Q 022019 139 CVFASTTR-----DHPIHLWDATTGLLRCTYRAYDA-VDEITAAFSVAFNPTGTKIFAG-----YNKSVRVFDVHRPGRD 207 (304)
Q Consensus 139 ~~l~~~~~-----dg~i~i~d~~~~~~~~~~~~~~~-~~~~~~v~~i~~~~~~~~l~~~-----~d~~i~v~d~~~~~~~ 207 (304)
+++++-.. ++.|.+||+.+++....+..... ......+..++++|++..++.+ .++.|.+||+.... .
T Consensus 79 ~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~-~ 157 (343)
T 2qe8_A 79 IVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGL-A 157 (343)
T ss_dssp EEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCC-E
T ss_pred cEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCC-E
Confidence 87666543 57899999999987776654321 1122356799999876555533 46899999987532 1
Q ss_pred ceeeee--------eeccccc--------------cccceeEEEeecCCCcEEEEEecCC-eEEEEecC---Cc-----e
Q 022019 208 FEKYST--------LKGNKEG--------------QAGIMSAIAFSPTHTGMLAIGSYSQ-TSAIYRED---NM-----E 256 (304)
Q Consensus 208 ~~~~~~--------~~~~~~~--------------~~~~v~~~~~~p~~~~~l~~~~~dg-~i~i~d~~---~~-----~ 256 (304)
...... ......+ ....+..++|+| ++..|+++..++ .+..++.. .+ +
T Consensus 158 ~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~-dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~ 236 (343)
T 2qe8_A 158 ARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDA-ENEWLYLSPMHSTSMYRIKSADLSNLQLTDAE 236 (343)
T ss_dssp EEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECT-TSCEEEEEESSCSEEEEEEHHHHTCTTCCHHH
T ss_pred EEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEecc-CCCEEEEEeCCCCeEEEEEHHHhcCCCCChhh
Confidence 111000 0000000 012357899999 555666665554 56555532 11 0
Q ss_pred EeE--EeccccCCeEEEEECCCCcEEEEeeccCCeEEEEecccce
Q 022019 257 LLY--VLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAV 299 (304)
Q Consensus 257 ~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~ 299 (304)
... ...++.+....++++++|.++++.. .++.|.+||..+++
T Consensus 237 ~~~~~~~~g~~g~pdgia~d~~G~l~va~~-~~~~V~~~d~~~G~ 280 (343)
T 2qe8_A 237 LGSKIERYSEKPICDGISIDKDHNIYVGDL-AHSAIGVITSADRA 280 (343)
T ss_dssp HHTTCEEEEECCSCSCEEECTTCCEEEEEG-GGTEEEEEETTTTE
T ss_pred hhcceEecccCCCCceEEECCCCCEEEEcc-CCCeEEEEECCCCC
Confidence 000 1113344566799999998888877 89999999985554
No 219
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.27 E-value=1.1e-08 Score=83.24 Aligned_cols=202 Identities=13% Similarity=0.134 Sum_probs=124.9
Q ss_pred CCCCeEEE-ecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeE---EEEeecCccceeCCCccEEEEEe
Q 022019 70 PDGSSFLT-SSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESV---YDFCWFPHMSASDPTSCVFASTT 145 (304)
Q Consensus 70 ~~~~~l~s-~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v---~~~~~~~~~~~~~~~~~~l~~~~ 145 (304)
+++++|+. +..+++|.++|+.+......+. -... ...+ .... .|+.+.+.|+| +++++.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~--------------k~ie-~~~~~~~~g~s-~Ph~~~~~pdG-i~Vs~~ 155 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKII--------------KVIE-PEEVKKVSGYS-RLHTVHCGPDA-IYISAL 155 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEE--------------EEEC-HHHHHHHHCEE-EEEEEEECSSC-EEEEEE
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceee--------------eeec-hhhcccccCCC-cccceeECCCe-EEEEcC
Confidence 77776655 5568899999987442110000 0000 0000 0011 35555668899 777776
Q ss_pred CC------CCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEc--------------------CCeEEEE
Q 022019 146 RD------HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGY--------------------NKSVRVF 199 (304)
Q Consensus 146 ~d------g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~--------------------d~~i~v~ 199 (304)
.+ |.|.++|..+.+.+..+..... ....-+.+-|+|+++.++++. +..|.+|
T Consensus 156 g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~--~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~ 233 (462)
T 2ece_A 156 GNEEGEGPGGILMLDHYSFEPLGKWEIDRG--DQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFW 233 (462)
T ss_dssp EETTSCSCCEEEEECTTTCCEEEECCSBCT--TCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEE
T ss_pred CCcCCCCCCeEEEEECCCCeEEEEEccCCC--CccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEE
Confidence 55 7899999999999888874432 111345688999999888774 7899999
Q ss_pred EcCCCCccceeeeeeeccccccccceeEEEe--ecCCCcEEEEEe------cCCeEEEEecCCce--EeEEe--ccc---
Q 022019 200 DVHRPGRDFEKYSTLKGNKEGQAGIMSAIAF--SPTHTGMLAIGS------YSQTSAIYREDNME--LLYVL--HGQ--- 264 (304)
Q Consensus 200 d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~p~~~~~l~~~~------~dg~i~i~d~~~~~--~~~~~--~~~--- 264 (304)
|+.+. +....+... ........+.| +| ++.++++++ .++.|.+|....++ ....+ ...
T Consensus 234 D~~~~----k~~~tI~vg--~~g~~P~~i~f~~~P-dg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~ 306 (462)
T 2ece_A 234 DLRKR----KRIHSLTLG--EENRMALELRPLHDP-TKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLE 306 (462)
T ss_dssp ETTTT----EEEEEEESC--TTEEEEEEEEECSST-TCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECC
T ss_pred ECCCC----cEeeEEecC--CCCCccceeEeeECC-CCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCcccc
Confidence 99863 222222211 01122445545 99 455555554 56788776654432 11211 110
Q ss_pred -------------cCCeEEEEECCCCcEEEEeeccCCeEEEEeccc
Q 022019 265 -------------EGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 265 -------------~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~ 297 (304)
......+.+||||++|+++....+.|.+||+..
T Consensus 307 ~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d 352 (462)
T 2ece_A 307 GNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISN 352 (462)
T ss_dssp SSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSS
T ss_pred ccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 234688999999999999998889999999863
No 220
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.24 E-value=6.4e-10 Score=93.52 Aligned_cols=207 Identities=11% Similarity=0.033 Sum_probs=129.0
Q ss_pred CceeEEEE-c-CCCCeEEEec------------------CCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCC
Q 022019 61 NFLKGIKW-S-PDGSSFLTSS------------------EDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGE 120 (304)
Q Consensus 61 ~~V~~i~~-s-~~~~~l~s~~------------------~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (304)
.....+++ + |++.+++.++ .++.+.+.|.++.+....+.
T Consensus 134 ~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~--------------------- 192 (595)
T 1fwx_A 134 KGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVL--------------------- 192 (595)
T ss_dssp CSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEE---------------------
T ss_pred CCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEE---------------------
Confidence 45788998 5 8999988874 24567777776543221111
Q ss_pred eEEEEeecCccceeCCCccEEEEEeCCC--------------------------------------CEEEEEcCC--Cee
Q 022019 121 SVYDFCWFPHMSASDPTSCVFASTTRDH--------------------------------------PIHLWDATT--GLL 160 (304)
Q Consensus 121 ~v~~~~~~~~~~~~~~~~~~l~~~~~dg--------------------------------------~i~i~d~~~--~~~ 160 (304)
+.-.|..++++|+|+++++++.+. .|.+.|.++ ++.
T Consensus 193 ----Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~ 268 (595)
T 1fwx_A 193 ----VSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSL 268 (595)
T ss_dssp ----ESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCS
T ss_pred ----eCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCce
Confidence 111344455566777666666432 477777776 433
Q ss_pred -eEEeecccccccccceEEEEECCCCcEEEE-E-cCCeEEEEEcCCCCcc----ceeeeeeeccccccccceeEEEeecC
Q 022019 161 -RCTYRAYDAVDEITAAFSVAFNPTGTKIFA-G-YNKSVRVFDVHRPGRD----FEKYSTLKGNKEGQAGIMSAIAFSPT 233 (304)
Q Consensus 161 -~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~-~-~d~~i~v~d~~~~~~~----~~~~~~~~~~~~~~~~~v~~~~~~p~ 233 (304)
...++... ...++.++|||+++++ + .+.+|.++|+.+.... +..-........ -......++|+|
T Consensus 269 ~~~~Ipvg~------~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~h~aF~~- 340 (595)
T 1fwx_A 269 FTRYIPIAN------NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLHTAFDG- 340 (595)
T ss_dssp SEEEEEEES------SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEEEEEECT-
T ss_pred eEEEEecCC------CceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcceEEECC-
Confidence 34444332 4568999999999995 4 8899999999752100 000001111111 123377899999
Q ss_pred CCcEEEEEecCCeEEEEecCC----------ceEeEEeccccCCe-----EEEEECCCCcEEEEeeccC-CeE-------
Q 022019 234 HTGMLAIGSYSQTSAIYREDN----------MELLYVLHGQEGGV-----THVQFSRDGNYLYTGGRKD-PYI------- 290 (304)
Q Consensus 234 ~~~~l~~~~~dg~i~i~d~~~----------~~~~~~~~~~~~~v-----~~~~~~~~~~~l~~~~~~d-~~i------- 290 (304)
++..+++...|+.|.+||+.. ...+.++..|-.+- ..+.++|||++|+++.... .++
T Consensus 341 dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~ 420 (595)
T 1fwx_A 341 RGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLK 420 (595)
T ss_dssp TSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSC
T ss_pred CCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccccccCCCCC
Confidence 456667777899999999976 55777777664432 1234689999999987322 233
Q ss_pred ----EEEeccccee
Q 022019 291 ----LCWDLRKAVQ 300 (304)
Q Consensus 291 ----~vwd~~~~~~ 300 (304)
.++|+..++.
T Consensus 421 ~~~~ql~dis~~~m 434 (595)
T 1fwx_A 421 PENDQLIDISGDKM 434 (595)
T ss_dssp CEEEEEEECSSSSC
T ss_pred CCcceEEEcCCCcE
Confidence 8899966543
No 221
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.23 E-value=2.5e-12 Score=104.64 Aligned_cols=184 Identities=14% Similarity=0.103 Sum_probs=100.5
Q ss_pred CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCE
Q 022019 71 DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPI 150 (304)
Q Consensus 71 ~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i 150 (304)
++..+++++.||.|..||..+++....... ..+.+ ..+..++..+++++.||.|
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-------------------~~~~s-------~p~~~~g~~~v~~s~dg~l 61 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-------------------DPVLQ-------VPTHVEEPAFLPDPNDGSL 61 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC-------------------CCSCC-------CC-----CCEEECTTTCCE
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC-------------------CCcee-------cceEcCCCEEEEeCCCCEE
Confidence 577899999999999999988765433221 11111 1113466678888899999
Q ss_pred EEEEcCCCeeeEEeecccccccccceE-EEEECCCCcEEE-EEcCCeEEEEEcCCCCccceeeeeeeccccccccceeEE
Q 022019 151 HLWDATTGLLRCTYRAYDAVDEITAAF-SVAFNPTGTKIF-AGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAI 228 (304)
Q Consensus 151 ~i~d~~~~~~~~~~~~~~~~~~~~~v~-~i~~~~~~~~l~-~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 228 (304)
+.||..+|+....+...... .+. +..+. .+..++ ++.++.++.||.+++..... . ..+. ..
T Consensus 62 ~a~d~~tG~~~w~~~~~~~~----~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~----~----~~~~----~~ 124 (369)
T 2hz6_A 62 YTLGSKNNEGLTKLPFTIPE----LVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQT----L----SSAF----AD 124 (369)
T ss_dssp EEC-----CCSEECSCCHHH----HHTTCSCC------CCCCEEEEEEEEECCC--------------------------
T ss_pred EEEECCCCceeeeeeccCcc----ccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEE----e----cCCC----cc
Confidence 99999988876655433210 110 11111 234455 45889999999987532211 1 1111 23
Q ss_pred EeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCC---cEEEEeeccCCeEEEEecccceee
Q 022019 229 AFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDG---NYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 229 ~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
.++| .+..+++++.|+.|+.||.++++.+..+..+. .....++++. ..+++++ .||.|+.||.++|+.+
T Consensus 125 ~~~p-~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~-~dg~v~a~d~~tG~~~ 196 (369)
T 2hz6_A 125 SLSP-STSLLYLGRTEYTITMYDTKTRELRWNATYFD--YAASLPEDDVDYKMSHFVSN-GDGLVVTVDSESGDVL 196 (369)
T ss_dssp ---------EEEEEEEEEEECCCSSSSSCCCEEEEEE--ECCBCCCCCTTCCCCEEEEE-TSCEEEEECTTTCCEE
T ss_pred cccc-cCCEEEEEecCCEEEEEECCCCCEEEeEeccc--ccCccccCCccccceEEEEC-CCCEEEEEECCCCcEE
Confidence 4567 56688889999999999999998766654221 2233344432 4577777 8999999999998764
No 222
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.21 E-value=2.8e-09 Score=85.75 Aligned_cols=208 Identities=13% Similarity=0.151 Sum_probs=121.9
Q ss_pred cCCCCceeEEEEcCCCCeEEEecC-----CCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCcc
Q 022019 57 SIPNNFLKGIKWSPDGSSFLTSSE-----DKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHM 131 (304)
Q Consensus 57 ~~h~~~V~~i~~s~~~~~l~s~~~-----dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 131 (304)
.+|...+.+++++++|+++++-.. ++.|.+||+.+++........... ..+...+..+
T Consensus 63 ~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~-----------~~~~~~~~~v------ 125 (343)
T 2qe8_A 63 IITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPI-----------TLSNSFVNDL------ 125 (343)
T ss_dssp CCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTT-----------SCTTCCCCEE------
T ss_pred ccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhh-----------cccccccceE------
Confidence 356678999999999886665433 578999999866532211110000 0011122333
Q ss_pred ceeCCC-ccEEEEEe---CCCCEEEEEcCCCeeeEEeecccccc------------------------cccceEEEEECC
Q 022019 132 SASDPT-SCVFASTT---RDHPIHLWDATTGLLRCTYRAYDAVD------------------------EITAAFSVAFNP 183 (304)
Q Consensus 132 ~~~~~~-~~~l~~~~---~dg~i~i~d~~~~~~~~~~~~~~~~~------------------------~~~~v~~i~~~~ 183 (304)
+++++ +..+++.. .++.|.+||+.+++....+..+.... -...+..|+|+|
T Consensus 126 -~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~ 204 (343)
T 2qe8_A 126 -AVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDA 204 (343)
T ss_dssp -EEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECT
T ss_pred -EEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEecc
Confidence 34554 44455555 57889999998887655443211000 002468899999
Q ss_pred CCcEEEEE-c-CCeEEEEEcCCCCc-cceeeeeeec--cccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEe
Q 022019 184 TGTKIFAG-Y-NKSVRVFDVHRPGR-DFEKYSTLKG--NKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELL 258 (304)
Q Consensus 184 ~~~~l~~~-~-d~~i~v~d~~~~~~-~~~~~~~~~~--~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~ 258 (304)
+++.|+.+ . ...+..++...... .... ..... ...++......+++++ ++.++++...++.|.+||..+++..
T Consensus 205 dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~g~~g~pdgia~d~-~G~l~va~~~~~~V~~~d~~~G~~~ 282 (343)
T 2qe8_A 205 ENEWLYLSPMHSTSMYRIKSADLSNLQLTD-AELGSKIERYSEKPICDGISIDK-DHNIYVGDLAHSAIGVITSADRAYK 282 (343)
T ss_dssp TSCEEEEEESSCSEEEEEEHHHHTCTTCCH-HHHHTTCEEEEECCSCSCEEECT-TCCEEEEEGGGTEEEEEETTTTEEE
T ss_pred CCCEEEEEeCCCCeEEEEEHHHhcCCCCCh-hhhhcceEecccCCCCceEEECC-CCCEEEEccCCCeEEEEECCCCCEE
Confidence 99988854 3 34566665421000 0000 00000 0012223466799999 6788888888999999998556543
Q ss_pred EEecc-ccCCeEEEEECCCCcEEEEee
Q 022019 259 YVLHG-QEGGVTHVQFSRDGNYLYTGG 284 (304)
Q Consensus 259 ~~~~~-~~~~v~~~~~~~~~~~l~~~~ 284 (304)
..... +.....+++|.++|.++++.+
T Consensus 283 ~~~~~~~~~~p~~va~~~~g~l~v~~~ 309 (343)
T 2qe8_A 283 LLVTDEKLSWTDSFNFGSDGYLYFDCN 309 (343)
T ss_dssp EEEECGGGSCEEEEEECTTSCEEEEEC
T ss_pred EEEECCceecCCeeEECCCCcEEEEeC
Confidence 33322 245689999999998777766
No 223
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.21 E-value=1.2e-09 Score=88.03 Aligned_cols=193 Identities=13% Similarity=0.090 Sum_probs=122.3
Q ss_pred EEcCCCCeEEEecC-----CCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEE
Q 022019 67 KWSPDGSSFLTSSE-----DKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVF 141 (304)
Q Consensus 67 ~~s~~~~~l~s~~~-----dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l 141 (304)
...|+++.++.... ++.|.+.|..+.+....+ . .-..|. ++++|+|+++
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I----------------~---------vG~~P~-va~spDG~~l 92 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMI----------------D---------GGFLPN-PVVADDGSFI 92 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEE----------------E---------ECSSCE-EEECTTSSCE
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEE----------------E---------CCCCCc-EEECCCCCEE
Confidence 34578887777654 679999999866442211 1 112233 4669999988
Q ss_pred EEEe----------CCCCEEEEEcCCCeeeEEeeccccc--ccccceEEEEECCCCcEEEEE-c--CCeEEEEEcCCCCc
Q 022019 142 ASTT----------RDHPIHLWDATTGLLRCTYRAYDAV--DEITAAFSVAFNPTGTKIFAG-Y--NKSVRVFDVHRPGR 206 (304)
Q Consensus 142 ~~~~----------~dg~i~i~d~~~~~~~~~~~~~~~~--~~~~~v~~i~~~~~~~~l~~~-~--d~~i~v~d~~~~~~ 206 (304)
++++ .++.|.+||..+.+....+...... ........+.|+|||++++++ . ++.|.++|+.+.
T Consensus 93 yVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~-- 170 (386)
T 3sjl_D 93 AHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGK-- 170 (386)
T ss_dssp EEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTT--
T ss_pred EEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCC--
Confidence 7775 3678999999999988887654210 001134579999999999955 3 689999999874
Q ss_pred cceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCC-ceEeEEeccc----cCCeE-EEEE-CCCCcE
Q 022019 207 DFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN-MELLYVLHGQ----EGGVT-HVQF-SRDGNY 279 (304)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~----~~~v~-~~~~-~~~~~~ 279 (304)
+....+.. .+ . ...+ |.+.+.+++.+.||.+.+.++.. ++.......+ ..++. ...| .++|++
T Consensus 171 --~vv~tI~v--~g----~-~~~~-P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~ 240 (386)
T 3sjl_D 171 --AFKRMLDV--PD----C-YHIF-PTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRL 240 (386)
T ss_dssp --EEEEEEEC--CS----E-EEEE-EEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEE
T ss_pred --cEEEEEEC--CC----c-ceee-cCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcE
Confidence 11122211 11 1 1223 43666777888899999999876 5543222111 12222 2456 468876
Q ss_pred EEEeeccCCeEEEEecccce
Q 022019 280 LYTGGRKDPYILCWDLRKAV 299 (304)
Q Consensus 280 l~~~~~~d~~i~vwd~~~~~ 299 (304)
++ .+ .+|.|++.|+.++.
T Consensus 241 ~~-vs-~~g~V~v~d~~~~~ 258 (386)
T 3sjl_D 241 VW-PT-YTGKIHQIDLSSGD 258 (386)
T ss_dssp EE-EB-TTSEEEEEECTTSS
T ss_pred EE-Ee-CCCEEEEEECCCCc
Confidence 66 45 68999999997654
No 224
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.18 E-value=2.4e-08 Score=75.43 Aligned_cols=184 Identities=7% Similarity=0.088 Sum_probs=118.1
Q ss_pred ceeEEEEcCCCCeEEEecCCC--eEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCcc
Q 022019 62 FLKGIKWSPDGSSFLTSSEDK--TLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSC 139 (304)
Q Consensus 62 ~V~~i~~s~~~~~l~s~~~dg--~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 139 (304)
....+.|+ ++.++.+.+.+| .|+++|+.+++........ ...--..+.. . .++
T Consensus 44 ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~----------------~~~FgeGit~-------~-g~~ 98 (262)
T 3nol_A 44 FTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG----------------KRYFGEGISD-------W-KDK 98 (262)
T ss_dssp EEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC----------------TTCCEEEEEE-------E-TTE
T ss_pred ccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecC----------------CccceeEEEE-------e-CCE
Confidence 45889998 677777777766 8999999987654332211 0000011111 1 223
Q ss_pred EEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeeccc
Q 022019 140 VFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNK 218 (304)
Q Consensus 140 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~ 218 (304)
+++..-.++.+.+||..+.+.+.++.... .-..++ +++..|+.+ .++.|.++|..+.. ....+.-..
T Consensus 99 ly~ltw~~~~v~v~D~~t~~~~~ti~~~~------eG~glt--~dg~~L~~SdGs~~i~~iDp~T~~----v~~~I~V~~ 166 (262)
T 3nol_A 99 IVGLTWKNGLGFVWNIRNLRQVRSFNYDG------EGWGLT--HNDQYLIMSDGTPVLRFLDPESLT----PVRTITVTA 166 (262)
T ss_dssp EEEEESSSSEEEEEETTTCCEEEEEECSS------CCCCEE--ECSSCEEECCSSSEEEEECTTTCS----EEEEEECEE
T ss_pred EEEEEeeCCEEEEEECccCcEEEEEECCC------CceEEe--cCCCEEEEECCCCeEEEEcCCCCe----EEEEEEecc
Confidence 44444568899999999999998887643 112344 567777765 67889999987632 112221111
Q ss_pred cccc-cceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccc------------cCCeEEEEECCCCcEEEEee
Q 022019 219 EGQA-GIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQ------------EGGVTHVQFSRDGNYLYTGG 284 (304)
Q Consensus 219 ~~~~-~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~------------~~~v~~~~~~~~~~~l~~~~ 284 (304)
.+.. ..+..+.|. ++.+++..-.++.|.+.|.++++.+..+... ....+.++|+|+++.|+.+|
T Consensus 167 ~g~~~~~lNELe~~--~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 167 HGEELPELNELEWV--DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp TTEECCCEEEEEEE--TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred CCccccccceeEEE--CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 1111 234567776 4556665657889999999999988877632 12568999999998888887
No 225
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.17 E-value=1.9e-08 Score=81.70 Aligned_cols=190 Identities=13% Similarity=0.035 Sum_probs=120.2
Q ss_pred EcCCCCeEEEecC--CC---eEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEE
Q 022019 68 WSPDGSSFLTSSE--DK---TLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFA 142 (304)
Q Consensus 68 ~s~~~~~l~s~~~--dg---~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~ 142 (304)
..|++++++++.. .. +|.++|..+++.... +.. ...| .++++|||++++
T Consensus 28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~------------------i~~-------g~~p-~i~~spDg~~ly 81 (373)
T 2mad_H 28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGH------------------VNG-------GFLP-NPVAAHSGSEFA 81 (373)
T ss_pred CCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEE------------------ecC-------CCCC-CeEECCCCCEEE
Confidence 3467776666543 22 889999886643211 111 1234 556799999988
Q ss_pred EEe----------CCCCEEEEEcCCCeeeEEeeccc--ccccccceEEEEECCCCcEEEEE--c-CCeEEEEEcCCCCcc
Q 022019 143 STT----------RDHPIHLWDATTGLLRCTYRAYD--AVDEITAAFSVAFNPTGTKIFAG--Y-NKSVRVFDVHRPGRD 207 (304)
Q Consensus 143 ~~~----------~dg~i~i~d~~~~~~~~~~~~~~--~~~~~~~v~~i~~~~~~~~l~~~--~-d~~i~v~d~~~~~~~ 207 (304)
++. .++.|.+||..+.+....+.... ..........+.|+|||++|+++ . ++.|.++| .+. +.
T Consensus 82 v~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~-~~ 159 (373)
T 2mad_H 82 LASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGG-SS 159 (373)
T ss_pred EEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCC-CE
Confidence 886 36789999999888877766531 00001134589999999999954 3 57899999 763 21
Q ss_pred ceeeee-eeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEec-----cccCC-eEEEEECCCCcEE
Q 022019 208 FEKYST-LKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH-----GQEGG-VTHVQFSRDGNYL 280 (304)
Q Consensus 208 ~~~~~~-~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-----~~~~~-v~~~~~~~~~~~l 280 (304)
. .. + .. . .++.+.|++...+++.+.||.+.++|. +++.+.... ....+ .....+.+++..+
T Consensus 160 ~---~~~i----~~-~---~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 227 (373)
T 2mad_H 160 D---DQLL----SS-P---TCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRI 227 (373)
T ss_pred E---eEEc----CC-C---ceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEE
Confidence 1 11 1 10 0 124556656667788889999999999 777653322 11122 2335667776666
Q ss_pred EEeeccCCeEEEEecccc
Q 022019 281 YTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 281 ~~~~~~d~~i~vwd~~~~ 298 (304)
+..+ .++.+.+.|+.++
T Consensus 228 ~~~~-~~~~v~vid~~~~ 244 (373)
T 2mad_H 228 VWPV-YSGKILQADISAA 244 (373)
T ss_pred EEEc-CCceEEEEeccCC
Confidence 6566 6788999988654
No 226
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.14 E-value=3.2e-08 Score=80.61 Aligned_cols=195 Identities=15% Similarity=0.153 Sum_probs=120.8
Q ss_pred eeEEEEcCCCCeEEEecCC------CeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCC
Q 022019 63 LKGIKWSPDGSSFLTSSED------KTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDP 136 (304)
Q Consensus 63 V~~i~~s~~~~~l~s~~~d------g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 136 (304)
-..+..+|+| .++++..+ |.|.+.|..+.+.......... ...--+++.| +|
T Consensus 140 Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~--------------~~~~~Yd~~~-------~p 197 (462)
T 2ece_A 140 LHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRG--------------DQYLAYDFWW-------NL 197 (462)
T ss_dssp EEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCT--------------TCCCCCCEEE-------ET
T ss_pred ccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCC--------------CccccceEEE-------CC
Confidence 4567788999 77766554 7899999987765433221100 0011123333 67
Q ss_pred CccEEEEEe-------------------CCCCEEEEEcCCCeeeEEeecccccccccceEEEEE--CCCCcEEEEE----
Q 022019 137 TSCVFASTT-------------------RDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAF--NPTGTKIFAG---- 191 (304)
Q Consensus 137 ~~~~l~~~~-------------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~--~~~~~~l~~~---- 191 (304)
+++.+++.. .+.+|.+||+.+++...++..... ......+.| +|++++++++
T Consensus 198 ~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~---g~~P~~i~f~~~Pdg~~aYV~~e~~ 274 (462)
T 2ece_A 198 PNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE---NRMALELRPLHDPTKLMGFINMVVS 274 (462)
T ss_dssp TTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT---EEEEEEEEECSSTTCCEEEEEEEEE
T ss_pred CCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCC---CCccceeEeeECCCCCEEEEEEeee
Confidence 888888774 367899999999888887776321 013345555 9999988843
Q ss_pred ---cCCeEEEEEcCCCCccceeeeeeeccc---c-----------ccccceeEEEeecCCCcEEEEEecCCeEEEEecC-
Q 022019 192 ---YNKSVRVFDVHRPGRDFEKYSTLKGNK---E-----------GQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED- 253 (304)
Q Consensus 192 ---~d~~i~v~d~~~~~~~~~~~~~~~~~~---~-----------~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~- 253 (304)
.+++|.+|.... ..+.....+.... . +.......+.++|++..++++.-..+.|.+||+.
T Consensus 275 ~~~Lss~V~v~~~d~--g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d 352 (462)
T 2ece_A 275 LKDLSSSIWLWFYED--GKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISN 352 (462)
T ss_dssp TTTCCEEEEEEEEET--TEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSS
T ss_pred ccCCCceEEEEEecC--CceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 456888777653 2222222211000 0 0023478899999555555555557899999985
Q ss_pred --CceEeEEecccc--------------CCeEEEEECCCCcEEEEee
Q 022019 254 --NMELLYVLHGQE--------------GGVTHVQFSRDGNYLYTGG 284 (304)
Q Consensus 254 --~~~~~~~~~~~~--------------~~v~~~~~~~~~~~l~~~~ 284 (304)
+.+.+..+.... +.-..+.++|||++|+++.
T Consensus 353 ~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 353 PFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp TTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 235555554321 1357899999999999887
No 227
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.13 E-value=1.6e-08 Score=89.18 Aligned_cols=198 Identities=15% Similarity=0.160 Sum_probs=118.5
Q ss_pred eEEEEcCCCCeEEEecCCCe-------------EEEeeCCCCCCccccccccccccCCccceEEEeec----CCeEEEEe
Q 022019 64 KGIKWSPDGSSFLTSSEDKT-------------LRIFSLPENGISYDVNACSLAKDQDSYEASLVVTE----GESVYDFC 126 (304)
Q Consensus 64 ~~i~~s~~~~~l~s~~~dg~-------------v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~ 126 (304)
..++|+ ||+.|+.++.+.. |.+|++.+.... ....... ......+.
T Consensus 178 ~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~----------------~~~v~~~~~~~~~~~~~~~ 240 (693)
T 3iuj_A 178 SGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQED----------------DRLVFGAIPAQHHRYVGAT 240 (693)
T ss_dssp CCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGG----------------CEEEESCSGGGCCSEEEEE
T ss_pred ccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCccc----------------ceEEEecCCCCCeEEEEEE
Confidence 578999 9999888877743 888888654211 0011111 11234454
Q ss_pred ecCccceeCCCccEEEEEeC----CCCEEEEEcCCCe-eeEEeecccccccccceEEEEECCCCcEEE-EE-c---CCeE
Q 022019 127 WFPHMSASDPTSCVFASTTR----DHPIHLWDATTGL-LRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-Y---NKSV 196 (304)
Q Consensus 127 ~~~~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~~-~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~---d~~i 196 (304)
| +|+|++|+.... +..|+++|+.++. ....+..... ..... |+++|..|+ .+ . .+.|
T Consensus 241 ~-------SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~-----~~~~~-~~~~g~~l~~~t~~~~~~~~l 307 (693)
T 3iuj_A 241 V-------TEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLD-----ADVSL-VDNKGSTLYLLTNRDAPNRRL 307 (693)
T ss_dssp E-------CTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSS-----SCEEE-EEEETTEEEEEECTTCTTCEE
T ss_pred E-------cCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCC-----ceEEE-EeccCCEEEEEECCCCCCCEE
Confidence 4 889988765432 2479999998763 2333333322 33333 666666665 44 3 3679
Q ss_pred EEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCC--eEEEEecCCceEeEEec-cccCCeEEEEE
Q 022019 197 RVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQ--TSAIYREDNMELLYVLH-GQEGGVTHVQF 273 (304)
Q Consensus 197 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~-~~~~~v~~~~~ 273 (304)
..+|+..+... .+..+. .+...+. .|+|++..++++...++ .|++||+..+. ...+. ...+.+..+.+
T Consensus 308 ~~~d~~~~~~~--~~~~l~----~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~-~~~l~~p~~~~~~~~~~ 378 (693)
T 3iuj_A 308 VTVDAANPGPA--HWRDLI----PERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKR-VREVALPGLGSVSGFNG 378 (693)
T ss_dssp EEEETTSCCGG--GCEEEE----CCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSCE-EEEECCSSSSEEEECCC
T ss_pred EEEeCCCCCcc--ccEEEe----cCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCCe-eEEeecCCCceEEeeec
Confidence 99998764321 111221 1222233 88885555555555565 58899987543 34443 23456778888
Q ss_pred CCCCcEEEEeeccC----CeEEEEecccceee
Q 022019 274 SRDGNYLYTGGRKD----PYILCWDLRKAVQV 301 (304)
Q Consensus 274 ~~~~~~l~~~~~~d----~~i~vwd~~~~~~~ 301 (304)
+|++..|+... .+ +.|..||+.+++..
T Consensus 379 ~~d~~~l~~~~-ss~~tP~~l~~~d~~~g~~~ 409 (693)
T 3iuj_A 379 KHDDPALYFGF-ENYAQPPTLYRFEPKSGAIS 409 (693)
T ss_dssp CTTCSCEEEEE-ECSSSCCEEEEECTTTCCEE
T ss_pred CCCCCEEEEEe-cCCCCCCEEEEEECCCCeEE
Confidence 99988776665 44 89999999877543
No 228
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.10 E-value=1.1e-08 Score=81.06 Aligned_cols=158 Identities=10% Similarity=0.017 Sum_probs=101.2
Q ss_pred cceeCCCccEEEE-------EeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCC-CcEEEEEcCCeEEEEEcC
Q 022019 131 MSASDPTSCVFAS-------TTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPT-GTKIFAGYNKSVRVFDVH 202 (304)
Q Consensus 131 ~~~~~~~~~~l~~-------~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~-~~~l~~~~d~~i~v~d~~ 202 (304)
.+++++++.++++ +..++.|.+||..+++.... ...........+.++.++++ +++++++..+.|.+||..
T Consensus 22 ~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~~d~~ 100 (314)
T 1pjx_A 22 GPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVI-CKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQTD 100 (314)
T ss_dssp EEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEE-ECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEETT
T ss_pred CceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEE-EecccCCCCCCCceEEEecCCCcEEEEECCCCEEEEeCC
Confidence 3444778888887 57788999999887765432 21100011236889999999 776666655689999986
Q ss_pred CCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecC---------------CeEEEEecCCceEeEEeccccCC
Q 022019 203 RPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS---------------QTSAIYREDNMELLYVLHGQEGG 267 (304)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d---------------g~i~i~d~~~~~~~~~~~~~~~~ 267 (304)
+. ...+. ...........+.+++++| ++.++++...+ +.|..||.. ++..... .+...
T Consensus 101 -g~--~~~~~-~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~-~~~~~ 173 (314)
T 1pjx_A 101 -GT--FEEIA-KKDSEGRRMQGCNDCAFDY-EGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD-TAFQF 173 (314)
T ss_dssp -SC--EEECC-SBCTTSCBCBCCCEEEECT-TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE-EEESS
T ss_pred -CC--EEEEE-eccCCCccccCCcCEEECC-CCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec-cCCCC
Confidence 32 11110 1000011223478999999 66677766554 568888865 4433322 23445
Q ss_pred eEEEEEC----CCCcEEEEeeccCCeEEEEecc
Q 022019 268 VTHVQFS----RDGNYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 268 v~~~~~~----~~~~~l~~~~~~d~~i~vwd~~ 296 (304)
...++|+ |+|+.|+.+...++.|.+|++.
T Consensus 174 ~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~ 206 (314)
T 1pjx_A 174 PNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIK 206 (314)
T ss_dssp EEEEEEEECTTSCEEEEEEEETTTTEEEEEEEE
T ss_pred cceEEEecccCCCCCEEEEEECCCCeEEEEECC
Confidence 6889999 9997766664267899999986
No 229
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.08 E-value=8.8e-09 Score=84.45 Aligned_cols=190 Identities=15% Similarity=0.098 Sum_probs=120.9
Q ss_pred CCCCeEEEecC-C----CeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEE
Q 022019 70 PDGSSFLTSSE-D----KTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFAST 144 (304)
Q Consensus 70 ~~~~~l~s~~~-d----g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~ 144 (304)
++++.++++.. + +.|.++|..+.+....+. +-..| .++++|++++++++
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~-------------------------vG~~P-gia~SpDgk~lyVa 135 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTD-------------------------GGFLP-HPVAAEDGSFFAQA 135 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEE-------------------------ECSSC-EEEECTTSSCEEEE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEE-------------------------CCCCC-ceEECCCCCEEEEE
Confidence 36665555443 2 799999998764432211 11234 55679999988887
Q ss_pred e----------CCCCEEEEEcCCCeeeEEeeccc--ccccccceEEEEECCCCcEEEEE--c-CCeEEEEEcCCCCccce
Q 022019 145 T----------RDHPIHLWDATTGLLRCTYRAYD--AVDEITAAFSVAFNPTGTKIFAG--Y-NKSVRVFDVHRPGRDFE 209 (304)
Q Consensus 145 ~----------~dg~i~i~d~~~~~~~~~~~~~~--~~~~~~~v~~i~~~~~~~~l~~~--~-d~~i~v~d~~~~~~~~~ 209 (304)
. .++.|.++|..+++....+.... ..........+.|+|||++++++ . ++.|.++|+.+..
T Consensus 136 n~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~k---- 211 (426)
T 3c75_H 136 STVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKT---- 211 (426)
T ss_dssp EEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTE----
T ss_pred eccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCe----
Confidence 6 46789999999999888776531 00001134578999999999965 2 5789999998741
Q ss_pred eeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEE----eccccCCe-EEEEECCCCcEEEEee
Q 022019 210 KYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYV----LHGQEGGV-THVQFSRDGNYLYTGG 284 (304)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~----~~~~~~~v-~~~~~~~~~~~l~~~~ 284 (304)
....+.. .+ +....|++...+++.+.||.+.+.+..+++.... +.....++ ..+.|++++..++..+
T Consensus 212 vv~~I~v--~g------~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s 283 (426)
T 3c75_H 212 FDRMLDV--PD------CYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPT 283 (426)
T ss_dssp EEEEEEC--CS------EEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEB
T ss_pred EEEEEEc--CC------ceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEe
Confidence 1122211 10 1233454456777777888888888865554422 22112221 2356899998888777
Q ss_pred ccCCeEEEEecccc
Q 022019 285 RKDPYILCWDLRKA 298 (304)
Q Consensus 285 ~~d~~i~vwd~~~~ 298 (304)
..+.+.+.|+..+
T Consensus 284 -~~g~V~ViD~~~~ 296 (426)
T 3c75_H 284 -YTGKIFQADLTAE 296 (426)
T ss_dssp -TTSEEEEEEECSS
T ss_pred -CCCcEEEEeccCC
Confidence 7899999998654
No 230
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.08 E-value=9.7e-07 Score=67.05 Aligned_cols=214 Identities=10% Similarity=0.068 Sum_probs=125.8
Q ss_pred eecCCCCceeEEEEcCCCCeE-EEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccce
Q 022019 55 TSSIPNNFLKGIKWSPDGSSF-LTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSA 133 (304)
Q Consensus 55 ~~~~h~~~V~~i~~s~~~~~l-~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 133 (304)
.+.+-.+.+..++|+|++..| ++...++.|...|.. ++.... +.+........+++
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~----------------i~l~g~~D~EGIa~------ 77 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRT----------------IPLDFVKDLETIEY------ 77 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEE----------------EECSSCSSEEEEEE------
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEE----------------EecCCCCChHHeEE------
Confidence 344556779999999976644 456678888888876 332211 11111123334443
Q ss_pred eCCCccEEEEEeCCCCEEEEEcCCCee---eEEeecc-cccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCC--CCc
Q 022019 134 SDPTSCVFASTTRDHPIHLWDATTGLL---RCTYRAY-DAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHR--PGR 206 (304)
Q Consensus 134 ~~~~~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~-~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~--~~~ 206 (304)
.+++.++++.-.++.+.++++..... ....... ..........+++|+|.+..|+++ ......+|.+.. ...
T Consensus 78 -~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~ 156 (255)
T 3qqz_A 78 -IGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSN 156 (255)
T ss_dssp -CSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSS
T ss_pred -eCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCC
Confidence 56777666665677899998865432 2222211 111222357899999998777744 433444444431 111
Q ss_pred cceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEecccc---------CCeEEEEECCCC
Q 022019 207 DFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQE---------GGVTHVQFSRDG 277 (304)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---------~~v~~~~~~~~~ 277 (304)
..................+.+++++|..+++++....+..+.++|.. ++++..+.-.. ..--.|+|.++|
T Consensus 157 ~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G 235 (255)
T 3qqz_A 157 ELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASG 235 (255)
T ss_dssp CCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTC
T ss_pred ceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCC
Confidence 11111100000011223478999999888888888888999999975 55555543211 245889999999
Q ss_pred cEEEEeeccCCeEEEEec
Q 022019 278 NYLYTGGRKDPYILCWDL 295 (304)
Q Consensus 278 ~~l~~~~~~d~~i~vwd~ 295 (304)
+ |+.++ ..+.++.+.-
T Consensus 236 ~-lyIvs-E~n~~y~f~~ 251 (255)
T 3qqz_A 236 N-IYIVS-EPNRFYRFTP 251 (255)
T ss_dssp C-EEEEE-TTTEEEEEEC
T ss_pred C-EEEEc-CCceEEEEEe
Confidence 7 66667 6776666644
No 231
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.08 E-value=2.3e-07 Score=69.50 Aligned_cols=185 Identities=14% Similarity=0.168 Sum_probs=118.3
Q ss_pred CceeEEEEcCCCCeEEEecCCC--eEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCc
Q 022019 61 NFLKGIKWSPDGSSFLTSSEDK--TLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS 138 (304)
Q Consensus 61 ~~V~~i~~s~~~~~l~s~~~dg--~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 138 (304)
.....+.|++ +.++.+.+.+| .|+.+|+.+++......... ..--..+.. . .+
T Consensus 21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~----------------~~fgeGi~~-------~-~~ 75 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPP----------------PYFGAGIVA-------W-RD 75 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCT----------------TCCEEEEEE-------E-TT
T ss_pred cccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCC----------------CcceeEEEE-------e-CC
Confidence 4566899986 66666767654 89999999876543321110 000011111 1 23
Q ss_pred cEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeecc
Q 022019 139 CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGN 217 (304)
Q Consensus 139 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~ 217 (304)
++++..-.++.+.+||..+.+.+.+++... .-..++ +++..|+++ .++.|.++|..+.. ....+.-.
T Consensus 76 ~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~------~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~----~~~~I~V~ 143 (243)
T 3mbr_X 76 RLIQLTWRNHEGFVYDLATLTPRARFRYPG------EGWALT--SDDSHLYMSDGTAVIRKLDPDTLQ----QVGSIKVT 143 (243)
T ss_dssp EEEEEESSSSEEEEEETTTTEEEEEEECSS------CCCEEE--ECSSCEEEECSSSEEEEECTTTCC----EEEEEECE
T ss_pred EEEEEEeeCCEEEEEECCcCcEEEEEeCCC------CceEEe--eCCCEEEEECCCCeEEEEeCCCCe----EEEEEEEc
Confidence 444555578999999999999999888643 223454 567777765 78899999987642 11222111
Q ss_pred cccc-ccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccc-------------cCCeEEEEECCCCcEEEEe
Q 022019 218 KEGQ-AGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQ-------------EGGVTHVQFSRDGNYLYTG 283 (304)
Q Consensus 218 ~~~~-~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------------~~~v~~~~~~~~~~~l~~~ 283 (304)
..+. -..++.+.|. ++.+++..-.+..|.+.|.++++.+..+... ....+.++++|++..|+..
T Consensus 144 ~~g~~~~~lNeLe~~--~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVT 221 (243)
T 3mbr_X 144 AGGRPLDNLNELEWV--NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVT 221 (243)
T ss_dssp ETTEECCCEEEEEEE--TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEE
T ss_pred cCCcccccceeeEEe--CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEE
Confidence 1111 1235567766 4556665656889999999999988877521 1256899999988887777
Q ss_pred e
Q 022019 284 G 284 (304)
Q Consensus 284 ~ 284 (304)
|
T Consensus 222 G 222 (243)
T 3mbr_X 222 G 222 (243)
T ss_dssp E
T ss_pred C
Confidence 7
No 232
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.07 E-value=5e-07 Score=69.83 Aligned_cols=201 Identities=12% Similarity=0.143 Sum_probs=121.2
Q ss_pred CceeEEEEcCCCCeEE-EecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCc-
Q 022019 61 NFLKGIKWSPDGSSFL-TSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS- 138 (304)
Q Consensus 61 ~~V~~i~~s~~~~~l~-s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~- 138 (304)
..+.+++|++++..|+ +-..++.|.++++...... ...... ...|..+++++++
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~------------------~~~~~~------~~~p~~ia~d~~~~ 91 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPT------------------TIIRQD------LGSPEGIALDHLGR 91 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCE------------------EEECTT------CCCEEEEEEETTTT
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcE------------------EEEECC------CCCccEEEEEecCC
Confidence 3578999999665544 5556789999998643210 001110 0123344556654
Q ss_pred cEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-c--CCeEEEEEcCCCCccceeeeee
Q 022019 139 CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-Y--NKSVRVFDVHRPGRDFEKYSTL 214 (304)
Q Consensus 139 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~--d~~i~v~d~~~~~~~~~~~~~~ 214 (304)
.++++-...+.|.++++............ ......++++|++..|+ +. . .+.|..+++.... .. .+
T Consensus 92 ~lyv~d~~~~~I~~~~~~g~~~~~~~~~~-----~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~--~~---~~ 161 (267)
T 1npe_A 92 TIFWTDSQLDRIEVAKMDGTQRRVLFDTG-----LVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN--RR---IL 161 (267)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEECSS-----CSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC--CE---EE
T ss_pred eEEEEECCCCEEEEEEcCCCCEEEEEECC-----CCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC--cE---EE
Confidence 45555556778999998654322222111 12567999999766655 44 2 4688888876421 11 11
Q ss_pred eccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEe
Q 022019 215 KGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWD 294 (304)
Q Consensus 215 ~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd 294 (304)
. .........++++|+++.++++-...+.|.++|+........+.+ ......++.. +..|+.+....+.|.++|
T Consensus 162 ~---~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d--~~~lyva~~~~~~v~~~d 235 (267)
T 1npe_A 162 A---QDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTSY--GKNLYYTDWKTNSVIAMD 235 (267)
T ss_dssp E---CTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEEE--TTEEEEEETTTTEEEEEE
T ss_pred E---ECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC-CCCceEEEEe--CCEEEEEECCCCeEEEEe
Confidence 1 111234788999996666777777788999999976544333332 2234566654 556666653678999999
Q ss_pred cccceee
Q 022019 295 LRKAVQV 301 (304)
Q Consensus 295 ~~~~~~~ 301 (304)
..+++.+
T Consensus 236 ~~~g~~~ 242 (267)
T 1npe_A 236 LAISKEM 242 (267)
T ss_dssp TTTTEEE
T ss_pred CCCCCce
Confidence 9887654
No 233
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.07 E-value=1.5e-07 Score=71.08 Aligned_cols=184 Identities=11% Similarity=0.110 Sum_probs=120.2
Q ss_pred CceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccE
Q 022019 61 NFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCV 140 (304)
Q Consensus 61 ~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 140 (304)
.....+.|+ ++.++.+.+.+|.|+++|+++++..... . ........+.. . .+++
T Consensus 55 ~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l----------------~~~~FgeGit~-------~-g~~L 108 (268)
T 3nok_A 55 AFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-R----------------LGNIFAEGLAS-------D-GERL 108 (268)
T ss_dssp CCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-E----------------CTTCCEEEEEE-------C-SSCE
T ss_pred cccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-C----------------CCCcceeEEEE-------e-CCEE
Confidence 345789997 4667778888999999999988764433 1 11000111211 1 2344
Q ss_pred EEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeeecccc
Q 022019 141 FASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKE 219 (304)
Q Consensus 141 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~ 219 (304)
++..-.++.+.+||..+.+.+.++.... .-..++ ++++.|+.+ .++.|.++|..+.. .. ..+.-...
T Consensus 109 y~ltw~~~~v~V~D~~Tl~~~~ti~~~~------eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~-v~---~~I~V~~~ 176 (268)
T 3nok_A 109 YQLTWTEGLLFTWSGMPPQRERTTRYSG------EGWGLC--YWNGKLVRSDGGTMLTFHEPDGFA-LV---GAVQVKLR 176 (268)
T ss_dssp EEEESSSCEEEEEETTTTEEEEEEECSS------CCCCEE--EETTEEEEECSSSEEEEECTTTCC-EE---EEEECEET
T ss_pred EEEEccCCEEEEEECCcCcEEEEEeCCC------ceeEEe--cCCCEEEEECCCCEEEEEcCCCCe-EE---EEEEeCCC
Confidence 5555578899999999999998888643 223444 567888866 78999999987642 11 22211111
Q ss_pred c-cccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccc-------------cCCeEEEEECCCCcEEEEee
Q 022019 220 G-QAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQ-------------EGGVTHVQFSRDGNYLYTGG 284 (304)
Q Consensus 220 ~-~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------------~~~v~~~~~~~~~~~l~~~~ 284 (304)
+ .-..++.+.|. ++.+++..-.++.|.+.|.++++.+..+... ....+.|+|+|+++.|+.+|
T Consensus 177 g~~v~~lNeLe~~--dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 177 GQPVELINELECA--NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp TEECCCEEEEEEE--TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred CcccccccccEEe--CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 1 11235667777 4556665556889999999999988877532 13578999999887777666
No 234
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.00 E-value=1e-10 Score=95.14 Aligned_cols=144 Identities=15% Similarity=0.135 Sum_probs=77.1
Q ss_pred CccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeeeee
Q 022019 137 TSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLK 215 (304)
Q Consensus 137 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~ 215 (304)
++..+++++.||.|+.||..+|+....+.. . .+.+..+..++..++++ .|+.|+.||..++..... ..
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~------~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~----~~ 76 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-D------PVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTK----LP 76 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC-C------CSCCCC-----CCEEECTTTCCEEEC-----CCSEE----CS
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC-C------CceecceEcCCCEEEEeCCCCEEEEEECCCCceeee----ee
Confidence 567899999999999999999998877765 2 34444455677677764 999999999976432211 11
Q ss_pred cccccccccee-EEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEe
Q 022019 216 GNKEGQAGIMS-AIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWD 294 (304)
Q Consensus 216 ~~~~~~~~~v~-~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd 294 (304)
.. ....+. +..+.. + ..+++|+.++.|+.||.++++.+..+..+. ...++|++..|++++ .|+.|+.||
T Consensus 77 ~~---~~~~~~~sp~~~~-~-~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~-~dg~v~a~d 146 (369)
T 2hz6_A 77 FT---IPELVQASPCRSS-D-GILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGR-TEYTITMYD 146 (369)
T ss_dssp CC---HHHHHTTCSCC-------CCCCEEEEEEEEECCC--------------------------EEEEE-EEEEEECCC
T ss_pred cc---CccccccCceEec-C-CEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEe-cCCEEEEEE
Confidence 00 000110 111112 3 367788889999999999999888776543 234567888999998 899999999
Q ss_pred cccceee
Q 022019 295 LRKAVQV 301 (304)
Q Consensus 295 ~~~~~~~ 301 (304)
.++|+.+
T Consensus 147 ~~tG~~~ 153 (369)
T 2hz6_A 147 TKTRELR 153 (369)
T ss_dssp SSSSSCC
T ss_pred CCCCCEE
Confidence 9998754
No 235
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.00 E-value=8.1e-07 Score=68.65 Aligned_cols=153 Identities=13% Similarity=0.065 Sum_probs=97.0
Q ss_pred ceeCCCc-cEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-cCCeEEEEEcCCCCccc
Q 022019 132 SASDPTS-CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGRDF 208 (304)
Q Consensus 132 ~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~v~d~~~~~~~~ 208 (304)
+++++++ .++++-...+.|..+++..+......... ......++++|++..++ +. ..+.|.++++.... .
T Consensus 41 i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~-----~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~--~ 113 (267)
T 1npe_A 41 LAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQD-----LGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ--R 113 (267)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTT-----CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS--C
T ss_pred EEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECC-----CCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCC--E
Confidence 3446654 45555556789999998765443322211 12567999999876666 44 67899999986421 1
Q ss_pred eeeeeeeccccccccceeEEEeecCCCcEEEEEec--CCeEEEEecCCceEeEEe-ccccCCeEEEEECCCCcEEEEeec
Q 022019 209 EKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSY--SQTSAIYREDNMELLYVL-HGQEGGVTHVQFSRDGNYLYTGGR 285 (304)
Q Consensus 209 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~ 285 (304)
. .+. .........++++|+++.++++... .+.|..+++.... ...+ ...-.....++++|++..|+.+..
T Consensus 114 ~---~~~---~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d~~~~~lyv~d~ 186 (267)
T 1npe_A 114 R---VLF---DTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFDAFSSQLCWVDA 186 (267)
T ss_dssp E---EEE---CSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEETTTTEEEEEET
T ss_pred E---EEE---ECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEcCCCCEEEEEEC
Confidence 1 111 1111346789999955655555543 4788888875432 2222 222345789999999888877765
Q ss_pred cCCeEEEEecccc
Q 022019 286 KDPYILCWDLRKA 298 (304)
Q Consensus 286 ~d~~i~vwd~~~~ 298 (304)
..+.|.++++...
T Consensus 187 ~~~~I~~~~~~g~ 199 (267)
T 1npe_A 187 GTHRAECLNPAQP 199 (267)
T ss_dssp TTTEEEEEETTEE
T ss_pred CCCEEEEEecCCC
Confidence 6789999998754
No 236
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.00 E-value=5.4e-08 Score=81.99 Aligned_cols=191 Identities=14% Similarity=0.131 Sum_probs=121.9
Q ss_pred CCCeEEEec-CCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeC-CCccEEEEEe---
Q 022019 71 DGSSFLTSS-EDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASD-PTSCVFASTT--- 145 (304)
Q Consensus 71 ~~~~l~s~~-~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~l~~~~--- 145 (304)
||+++..+. .+++|.+.|+++.+....+ .+..+.....+++. + |+++++++++
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii----------------~ip~g~~phg~~~~------~~p~~~~v~~~~~~~ 157 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAIL----------------EIPNAKGIHGLRPQ------KWPRSNYVFCNGEDE 157 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEE----------------ECSSCCSEEEEEEC------CSSBCSEEEEEECSC
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEE----------------eCCCCCCCcceeee------ecCCCcEEEEecccc
Confidence 788776655 4667999999876543211 11122223333321 3 6777777774
Q ss_pred ---------------CCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEE-EcC---------------C
Q 022019 146 ---------------RDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA-GYN---------------K 194 (304)
Q Consensus 146 ---------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~-~~d---------------~ 194 (304)
.++.+.+.|..+.+...++.... ....++++|+|+++++ +.+ .
T Consensus 158 ~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg------~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d 231 (595)
T 1fwx_A 158 TPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG------NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMD 231 (595)
T ss_dssp EESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS------CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEE
T ss_pred cccCCCCcccccccccCceEEEEECCCCeEEEEEEeCC------CccceEECCCCCEEEEEecCcccCcchhhccccccc
Confidence 34578999999988887777543 2346889999999994 422 1
Q ss_pred -----------------------eEEEEEcCCCCcccee-eeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEE
Q 022019 195 -----------------------SVRVFDVHRPGRDFEK-YSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIY 250 (304)
Q Consensus 195 -----------------------~i~v~d~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~ 250 (304)
.|.+.|.++... .. ...+. -.....++.++||+..+++++..+..|.++
T Consensus 232 ~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~--~~~~~~Ip-----vg~~PhGv~~sPDGk~v~V~~~~s~~VsVi 304 (595)
T 1fwx_A 232 HIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEAS--SLFTRYIP-----IANNPHGCNMAPDKKHLCVAGKLSPTVTVL 304 (595)
T ss_dssp EEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGC--CSSEEEEE-----EESSCCCEEECTTSSEEEEECTTSSBEEEE
T ss_pred eEEEeeccceeEeccCCCeeEECcEEEEeCcccCC--ceeEEEEe-----cCCCceEEEEcCCCCEEEEeCCCCCeEEEE
Confidence 244555543100 00 01110 011256799999666566666678999999
Q ss_pred ecCCce------------EeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEecccc
Q 022019 251 REDNME------------LLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 251 d~~~~~------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~ 298 (304)
|+.+.+ .+..+.. ......++|+|+| ++++...-|+.|.+||+.++
T Consensus 305 d~~~~~~~~~~~l~~~~~v~~~v~v-G~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~a 362 (595)
T 1fwx_A 305 DVTRFDAVFYENADPRSAVVAEPEL-GLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIEDA 362 (595)
T ss_dssp EGGGHHHHHHSCCCGGGGEEECCBC-CSCEEEEEECTTS-EEEEEETTTTEEEEEEHHHH
T ss_pred ECcccccccccccCcccceEEEcCC-CCCcceEEECCCC-eEEEEEecCCcEEEEEhhHh
Confidence 998653 3444442 3457899999999 77777769999999999873
No 237
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.95 E-value=6e-08 Score=74.10 Aligned_cols=151 Identities=7% Similarity=0.050 Sum_probs=99.1
Q ss_pred ceeCCCccEEEEEeC--CCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-cCCeEEEEEcCCCCcc
Q 022019 132 SASDPTSCVFASTTR--DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGRD 207 (304)
Q Consensus 132 ~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~v~d~~~~~~~ 207 (304)
+.+++++.++++.+. ++.|+++|+.+++....+...... ....++++ +..++ +. .++.+.++|..+.
T Consensus 26 l~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~----fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~--- 96 (266)
T 2iwa_A 26 LVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSY----FGEGLTLL--NEKLYQVVWLKNIGFIYDRRTL--- 96 (266)
T ss_dssp EEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTC----CEEEEEEE--TTEEEEEETTCSEEEEEETTTT---
T ss_pred EEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCc----ceEEEEEe--CCEEEEEEecCCEEEEEECCCC---
Confidence 344777766666553 578999999999988887653321 22345554 55666 45 7999999999763
Q ss_pred ceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEecccc-----CCeEEEEECCCCcEEEE
Q 022019 208 FEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQE-----GGVTHVQFSRDGNYLYT 282 (304)
Q Consensus 208 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~ 282 (304)
+....+... .+ ....++++++.++ ++..++.|.++|..+.+.+..+.... ..++.+.|. +|. |++
T Consensus 97 -~v~~~i~~g-~~-----~g~glt~Dg~~l~-vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~-lyv 166 (266)
T 2iwa_A 97 -SNIKNFTHQ-MK-----DGWGLATDGKILY-GSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGE-VWA 166 (266)
T ss_dssp -EEEEEEECC-SS-----SCCEEEECSSSEE-EECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE-EEE
T ss_pred -cEEEEEECC-CC-----CeEEEEECCCEEE-EECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCE-EEE
Confidence 222222211 01 1233556455555 45568899999999988888776322 136788888 675 554
Q ss_pred eeccCCeEEEEecccceee
Q 022019 283 GGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 283 ~~~~d~~i~vwd~~~~~~~ 301 (304)
....++.|.+.|..+++.+
T Consensus 167 n~~~~~~V~vID~~tg~V~ 185 (266)
T 2iwa_A 167 NIWQTDCIARISAKDGTLL 185 (266)
T ss_dssp EETTSSEEEEEETTTCCEE
T ss_pred ecCCCCeEEEEECCCCcEE
Confidence 4436889999999998654
No 238
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.94 E-value=2.9e-07 Score=80.90 Aligned_cols=166 Identities=14% Similarity=0.125 Sum_probs=103.1
Q ss_pred eeCCCccEEEEEeCCCC-------------------EEEEEcCCCeeeEEeeccccc--c--cccceEEEEECCCCc---
Q 022019 133 ASDPTSCVFASTTRDHP-------------------IHLWDATTGLLRCTYRAYDAV--D--EITAAFSVAFNPTGT--- 186 (304)
Q Consensus 133 ~~~~~~~~l~~~~~dg~-------------------i~i~d~~~~~~~~~~~~~~~~--~--~~~~v~~i~~~~~~~--- 186 (304)
+++|++.+++.+..++. |..+|.++|+.+..+...... . ....+.......+|+
T Consensus 241 ~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~ 320 (689)
T 1yiq_A 241 AYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRK 320 (689)
T ss_dssp EEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEE
T ss_pred eEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEE
Confidence 45677788888887763 999999999988777643210 0 111122222223554
Q ss_pred EEEEE-cCCeEEEEEcCCCCccceeeee---eecc-----------------ccccc-----------cceeEEEeecCC
Q 022019 187 KIFAG-YNKSVRVFDVHRPGRDFEKYST---LKGN-----------------KEGQA-----------GIMSAIAFSPTH 234 (304)
Q Consensus 187 ~l~~~-~d~~i~v~d~~~~~~~~~~~~~---~~~~-----------------~~~~~-----------~~v~~~~~~p~~ 234 (304)
.++.+ .+|.++++|.+++......... .... ..... ..-..++|+|+
T Consensus 321 ~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~- 399 (689)
T 1yiq_A 321 VLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPD- 399 (689)
T ss_dssp EEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETT-
T ss_pred EEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCC-
Confidence 56655 8999999999875322110000 0000 00000 01123788994
Q ss_pred CcEEEEEec---------------------------------------------CCeEEEEecCCceEeEEeccccCCeE
Q 022019 235 TGMLAIGSY---------------------------------------------SQTSAIYREDNMELLYVLHGQEGGVT 269 (304)
Q Consensus 235 ~~~l~~~~~---------------------------------------------dg~i~i~d~~~~~~~~~~~~~~~~v~ 269 (304)
..++++.+. +|.|+.||+.+++.+..+..+. ++.
T Consensus 400 ~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~ 478 (689)
T 1yiq_A 400 TGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT-IFN 478 (689)
T ss_dssp TTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS-SCC
T ss_pred CCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC-Ccc
Confidence 445555432 3779999999999888877543 333
Q ss_pred EEEECCCCcEEEEeeccCCeEEEEecccceee
Q 022019 270 HVQFSRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 270 ~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
.-.+...+..++.++ .||.|+.||.++|+.+
T Consensus 479 ~g~~~tagglvf~gt-~dg~l~a~D~~tG~~l 509 (689)
T 1yiq_A 479 GGTLSTAGNLVFEGS-ADGRVIAYAADTGEKL 509 (689)
T ss_dssp CCEEEETTTEEEEEC-TTSEEEEEETTTCCEE
T ss_pred CccceECCCEEEEEC-CCCcEEEEECCCCccc
Confidence 345556788899998 9999999999999876
No 239
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.88 E-value=4.7e-07 Score=79.38 Aligned_cols=167 Identities=13% Similarity=0.118 Sum_probs=104.4
Q ss_pred eeCCCccEEEEEeCCC-------------------CEEEEEcCCCeeeEEeeccccc----ccccceEEEEECCCC---c
Q 022019 133 ASDPTSCVFASTTRDH-------------------PIHLWDATTGLLRCTYRAYDAV----DEITAAFSVAFNPTG---T 186 (304)
Q Consensus 133 ~~~~~~~~l~~~~~dg-------------------~i~i~d~~~~~~~~~~~~~~~~----~~~~~v~~i~~~~~~---~ 186 (304)
++++++.+++.+..++ .|..+|.++|+....+...... ........+....+| .
T Consensus 249 ~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~ 328 (677)
T 1kb0_A 249 TFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRK 328 (677)
T ss_dssp EEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEE
T ss_pred eEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEee
Confidence 3466777777776654 4999999999988777653210 001122233333466 5
Q ss_pred EEEEE-cCCeEEEEEcCCCCccceeeeeeec---cccccccc------------------------eeEEEeecCCCcEE
Q 022019 187 KIFAG-YNKSVRVFDVHRPGRDFEKYSTLKG---NKEGQAGI------------------------MSAIAFSPTHTGML 238 (304)
Q Consensus 187 ~l~~~-~d~~i~v~d~~~~~~~~~~~~~~~~---~~~~~~~~------------------------v~~~~~~p~~~~~l 238 (304)
.++.+ .+|.++++|.+++............ .......+ -..++|+|+ ..++
T Consensus 329 ~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~-~~~~ 407 (677)
T 1kb0_A 329 VILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQ-TGLV 407 (677)
T ss_dssp EEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETT-TTEE
T ss_pred EEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCC-CCEE
Confidence 56655 9999999999875332111000000 00000000 125788994 4455
Q ss_pred EEEec-------------------------------------------CCeEEEEecCCceEeEEeccccCCeEEEEECC
Q 022019 239 AIGSY-------------------------------------------SQTSAIYREDNMELLYVLHGQEGGVTHVQFSR 275 (304)
Q Consensus 239 ~~~~~-------------------------------------------dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~ 275 (304)
++... .|.|..||+.+++.+..+. +..++....+..
T Consensus 408 yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~-~~~~~~~g~~~~ 486 (677)
T 1kb0_A 408 YLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE-HVSPWNGGTLTT 486 (677)
T ss_dssp EEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEE-ESSSCCCCEEEE
T ss_pred EEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecC-CCCCCcCcceEe
Confidence 55433 2789999999999888776 334445555667
Q ss_pred CCcEEEEeeccCCeEEEEecccceeee
Q 022019 276 DGNYLYTGGRKDPYILCWDLRKAVQVV 302 (304)
Q Consensus 276 ~~~~l~~~~~~d~~i~vwd~~~~~~~~ 302 (304)
++..++.++ .||.+++||.++|+.+.
T Consensus 487 ~g~~v~~g~-~dg~l~a~D~~tG~~lw 512 (677)
T 1kb0_A 487 AGNVVFQGT-ADGRLVAYHAATGEKLW 512 (677)
T ss_dssp TTTEEEEEC-TTSEEEEEETTTCCEEE
T ss_pred CCCEEEEEC-CCCcEEEEECCCCceee
Confidence 788899888 99999999999998763
No 240
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.82 E-value=4.5e-06 Score=66.35 Aligned_cols=216 Identities=13% Similarity=0.097 Sum_probs=114.6
Q ss_pred CceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccc--cCCccceEEEeecCCeEEEEeecCccceeCC-C
Q 022019 61 NFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAK--DQDSYEASLVVTEGESVYDFCWFPHMSASDP-T 137 (304)
Q Consensus 61 ~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~ 137 (304)
....+++|+++|++++++..++.|..|+..++............. ...................+ ++++ +
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi-------~~~~~~ 91 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDI-------SYNLQN 91 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEE-------EEETTT
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceE-------EEcCCC
Confidence 446778999999878888889999999877543211000000000 00000000000000122333 3465 5
Q ss_pred ccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECC-CCcEEEEEc------------------CCeEEE
Q 022019 138 SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNP-TGTKIFAGY------------------NKSVRV 198 (304)
Q Consensus 138 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~~~~------------------d~~i~v 198 (304)
+++++ +...+.|..+|..++... .+..............+++++ +|++.++.. ++.|..
T Consensus 92 g~l~v-~d~~~~i~~~d~~~g~~~-~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~ 169 (322)
T 2fp8_A 92 NQLYI-VDCYYHLSVVGSEGGHAT-QLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIK 169 (322)
T ss_dssp TEEEE-EETTTEEEEECTTCEECE-EEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEE
T ss_pred CcEEE-EECCCCEEEEeCCCCEEE-EecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEE
Confidence 55544 444444888887655432 221111001112467899999 998777542 267888
Q ss_pred EEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCce--EeEEeccccCCeEEEEECCC
Q 022019 199 FDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME--LLYVLHGQEGGVTHVQFSRD 276 (304)
Q Consensus 199 ~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~~ 276 (304)
||..... . ..... .......++|+|++..++++-+.++.|.+|++.... ....+....+ ...++++++
T Consensus 170 ~d~~~~~--~---~~~~~----~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~ 239 (322)
T 2fp8_A 170 YDPSTKE--T---TLLLK----ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNAD 239 (322)
T ss_dssp EETTTTE--E---EEEEE----EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTT
T ss_pred EeCCCCE--E---EEecc----CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCC
Confidence 8875421 1 11110 112356799999444355555667899999987421 1111111123 688999999
Q ss_pred CcEEEEeecc----------CCeEEEEecc
Q 022019 277 GNYLYTGGRK----------DPYILCWDLR 296 (304)
Q Consensus 277 ~~~l~~~~~~----------d~~i~vwd~~ 296 (304)
|.+.++.. . .+.|..+|..
T Consensus 240 G~l~va~~-~~~~~~~~~~~~~~v~~~d~~ 268 (322)
T 2fp8_A 240 GHFWVSSS-EELDGNMHGRVDPKGIKFDEF 268 (322)
T ss_dssp SCEEEEEE-EETTSSTTSCEEEEEEEECTT
T ss_pred CCEEEEec-CcccccccCCCccEEEEECCC
Confidence 98666554 3 3567777764
No 241
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.81 E-value=6.3e-07 Score=79.68 Aligned_cols=197 Identities=10% Similarity=0.095 Sum_probs=109.2
Q ss_pred ceeEEEEc-CCCCeEEEecC-C----CeEEEeeCCCC-CCccccccccccccCCccceEEEeecCCeEEEEeecCcccee
Q 022019 62 FLKGIKWS-PDGSSFLTSSE-D----KTLRIFSLPEN-GISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (304)
Q Consensus 62 ~V~~i~~s-~~~~~l~s~~~-d----g~v~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (304)
.+...+|| |||++||-+.. + ..|+++|+.++ +.... .+. .....+ ++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~---------------~~~----~~~~~~-------~W 228 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD---------------KVS----GTNGEI-------VW 228 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC---------------CEE----EECSCC-------EE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc---------------ccc----CceeeE-------EE
Confidence 67889999 99998885432 2 35999999876 42100 000 001123 44
Q ss_pred CCCccEEEEEeCC-----CCEEEEEcCCCeee--EEeecccccccccceEEEEECCCCcEEE-EE---cCCeEEEEEcCC
Q 022019 135 DPTSCVFASTTRD-----HPIHLWDATTGLLR--CTYRAYDAVDEITAAFSVAFNPTGTKIF-AG---YNKSVRVFDVHR 203 (304)
Q Consensus 135 ~~~~~~l~~~~~d-----g~i~i~d~~~~~~~--~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~---~d~~i~v~d~~~ 203 (304)
+|||+.|+....+ ..|+++++.++... ..+..... ....++.|+|||++|+ ++ ....|+++|+..
T Consensus 229 spDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~----~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~ 304 (751)
T 2xe4_A 229 GPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNP----LFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRK 304 (751)
T ss_dssp CSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCT----TCEEEEEECTTSSEEEEEEECSSCEEEEEEESSS
T ss_pred ecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCC----ceEEEEEECCCCCEEEEEecCCCCceEEEEECCC
Confidence 8899887777665 25888888776422 22322111 1456889999999988 33 245688888876
Q ss_pred CCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecC----CeEEEEecCCceEeEE-eccccC--CeEEEEECCC
Q 022019 204 PGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS----QTSAIYREDNMELLYV-LHGQEG--GVTHVQFSRD 276 (304)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d----g~i~i~d~~~~~~~~~-~~~~~~--~v~~~~~~~~ 276 (304)
+.... ....+. ........++.|+. ++.+++....+ ..|..+|+.+...... +-.+.. .+..+.+.
T Consensus 305 ~~~~~-~~~~l~---~~~~~~~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-- 377 (751)
T 2xe4_A 305 GNAHN-TLEIVR---PREKGVRYDVQMHG-TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-- 377 (751)
T ss_dssp CTTCC-CEEESS---CCCTTCCEEEEEET-TTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC--
T ss_pred CCCCc-eeEEee---cCCCCceEEEeeee-CCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE--
Confidence 42111 001111 22234445566655 66666665554 3577777764221122 222333 45556664
Q ss_pred CcEEEEeeccCCeEE--EEec
Q 022019 277 GNYLYTGGRKDPYIL--CWDL 295 (304)
Q Consensus 277 ~~~l~~~~~~d~~i~--vwd~ 295 (304)
+..|+.....++..+ ++++
T Consensus 378 ~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 378 SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp SSEEEEEEEETTEEEEEEEEC
T ss_pred CCEEEEEEEeCCEEEEEEEec
Confidence 445544443777644 4554
No 242
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.81 E-value=1.9e-07 Score=81.85 Aligned_cols=208 Identities=8% Similarity=0.086 Sum_probs=123.8
Q ss_pred eEEEEcCCCCeEEEecCCC-------------------eEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEE
Q 022019 64 KGIKWSPDGSSFLTSSEDK-------------------TLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYD 124 (304)
Q Consensus 64 ~~i~~s~~~~~l~s~~~dg-------------------~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 124 (304)
..++++|++..++.+..++ +|..+|..+++.......... +... +.
T Consensus 246 ~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~----d~wd-----------~~ 310 (677)
T 1kb0_A 246 DSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPG----DNWD-----------YT 310 (677)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTT----CCSC-----------CC
T ss_pred cceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCC----cccc-----------cc
Confidence 4688999888888877664 488888887765433221110 0000 00
Q ss_pred EeecCccceeCCCc---cEEEEEeCCCCEEEEEcCCCeeeEEeeccccc------ccccce-------------------
Q 022019 125 FCWFPHMSASDPTS---CVFASTTRDHPIHLWDATTGLLRCTYRAYDAV------DEITAA------------------- 176 (304)
Q Consensus 125 ~~~~~~~~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~------~~~~~v------------------- 176 (304)
....|.......+| ..++.++.+|.++++|..+|+.+......... .....+
T Consensus 311 ~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~ 390 (677)
T 1kb0_A 311 STQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPY 390 (677)
T ss_dssp CCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTT
T ss_pred cCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcc
Confidence 00001111112255 57889999999999999999987766532110 000001
Q ss_pred -----EEEEECCCCcEEEEE-cC-------------------------------------------CeEEEEEcCCCCcc
Q 022019 177 -----FSVAFNPTGTKIFAG-YN-------------------------------------------KSVRVFDVHRPGRD 207 (304)
Q Consensus 177 -----~~i~~~~~~~~l~~~-~d-------------------------------------------~~i~v~d~~~~~~~ 207 (304)
..++++|++.++++. .+ +.|..||+.++...
T Consensus 391 G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~ 470 (677)
T 1kb0_A 391 GAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAA 470 (677)
T ss_dssp CSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEE
T ss_pred cccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEE
Confidence 257889988887753 21 67899998875321
Q ss_pred ceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEecccc-CCeEEEEECCCCcEEEEeecc
Q 022019 208 FEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQE-GGVTHVQFSRDGNYLYTGGRK 286 (304)
Q Consensus 208 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~~ 286 (304)
.... +..++....+.. .+.++++++.||.+++||.++++.+.++.... ....-+.|.++|+.+++....
T Consensus 471 ----W~~~-----~~~~~~~g~~~~-~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~~~~G 540 (677)
T 1kb0_A 471 ----WSVE-----HVSPWNGGTLTT-AGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVSVAVG 540 (677)
T ss_dssp ----EEEE-----ESSSCCCCEEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEEC
T ss_pred ----eecC-----CCCCCcCcceEe-CCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEEEEecc
Confidence 2211 112233344555 44577888999999999999999999987433 223445667788754433201
Q ss_pred ----------------CCeEEEEecc
Q 022019 287 ----------------DPYILCWDLR 296 (304)
Q Consensus 287 ----------------d~~i~vwd~~ 296 (304)
.+.+.+|.+.
T Consensus 541 ~~~~~~~~~~~~~~~~~~~l~~f~l~ 566 (677)
T 1kb0_A 541 WGGVYGLAARATERQGPGTVYTFVVG 566 (677)
T ss_dssp CCHHHHHHCCSCSCCCCCEEEEEEET
T ss_pred CCccccccccccccCCCCeEEEEecc
Confidence 3677777775
No 243
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.78 E-value=8.3e-06 Score=64.81 Aligned_cols=200 Identities=10% Similarity=0.023 Sum_probs=114.4
Q ss_pred ceeEEEEcC-CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCC-Ccc
Q 022019 62 FLKGIKWSP-DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDP-TSC 139 (304)
Q Consensus 62 ~V~~i~~s~-~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~ 139 (304)
.+.+|++.+ +|+++ .+...+.|..+|..++....... ...+.. .-.|..+++++ +|+
T Consensus 81 ~p~gi~~~~~~g~l~-v~d~~~~i~~~d~~~g~~~~~~~----------------~~~~~~----~~~p~~i~~d~~~G~ 139 (322)
T 2fp8_A 81 RTYDISYNLQNNQLY-IVDCYYHLSVVGSEGGHATQLAT----------------SVDGVP----FKWLYAVTVDQRTGI 139 (322)
T ss_dssp CEEEEEEETTTTEEE-EEETTTEEEEECTTCEECEEEES----------------EETTEE----CSCEEEEEECTTTCC
T ss_pred CCceEEEcCCCCcEE-EEECCCCEEEEeCCCCEEEEecc----------------cCCCCc----ccccceEEEecCCCE
Confidence 578899998 66544 44444558888866432110000 000000 01133345578 887
Q ss_pred EEEEEeC-----------------CCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE--cCCeEEEEE
Q 022019 140 VFASTTR-----------------DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG--YNKSVRVFD 200 (304)
Q Consensus 140 ~l~~~~~-----------------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~--~d~~i~v~d 200 (304)
++++-.. ++.|..+|..+++......... ....++++|+++.|+++ ..+.|.+|+
T Consensus 140 l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~------~p~gia~~~dg~~lyv~d~~~~~I~~~~ 213 (322)
T 2fp8_A 140 VYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELH------VPGGAEVSADSSFVLVAEFLSHQIVKYW 213 (322)
T ss_dssp EEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEES------CCCEEEECTTSSEEEEEEGGGTEEEEEE
T ss_pred EEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCc------cCcceEECCCCCEEEEEeCCCCeEEEEE
Confidence 7766432 3678888887776433222111 45689999999877744 668999999
Q ss_pred cCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEec----------CCeEEEEecCCceEeEEecccc----C
Q 022019 201 VHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSY----------SQTSAIYREDNMELLYVLHGQE----G 266 (304)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~----------dg~i~i~d~~~~~~~~~~~~~~----~ 266 (304)
+..... .....+.. .. + ...+++++ ++.++++... .+.|..+|. .++.+..+.... .
T Consensus 214 ~~~~~~--~~~~~~~~-~~---g-P~gi~~d~-~G~l~va~~~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~ 284 (322)
T 2fp8_A 214 LEGPKK--GTAEVLVK-IP---N-PGNIKRNA-DGHFWVSSSEELDGNMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGE 284 (322)
T ss_dssp SSSTTT--TCEEEEEE-CS---S-EEEEEECT-TSCEEEEEEEETTSSTTSCEEEEEEEECT-TSCEEEEEECCTTTTTS
T ss_pred CCCCcC--CccceEEe-CC---C-CCCeEECC-CCCEEEEecCcccccccCCCccEEEEECC-CCCEEEEEECCCCCccc
Confidence 874211 11111111 11 2 67789999 5556655544 467888887 466666665332 3
Q ss_pred CeEEEEECCCCcEEEEeeccCCeEEEEecccce
Q 022019 267 GVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAV 299 (304)
Q Consensus 267 ~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~ 299 (304)
.++.+++ .++...++.. .++.|..+++....
T Consensus 285 ~~~~~~~-~~g~L~v~~~-~~~~i~~~~~~~~~ 315 (322)
T 2fp8_A 285 HFEQIQE-HDGLLYIGTL-FHGSVGILVYDKKG 315 (322)
T ss_dssp CCCEEEE-ETTEEEEECS-SCSEEEEEEC----
T ss_pred cceEEEE-eCCEEEEeec-CCCceEEEeccccc
Confidence 4667776 3565555544 78899999987543
No 244
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.78 E-value=5.1e-07 Score=71.89 Aligned_cols=141 Identities=10% Similarity=0.081 Sum_probs=91.1
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccceeeeee
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTL 214 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~~~ 214 (304)
.+++.+++. + +.|..+| .+++.......... .+.++..+++|...+++.++.+..+|... ... ...
T Consensus 185 d~~g~l~v~-t--~~l~~~d-~~g~~~~~~~~~~~-----~~~~~~~~~~g~l~v~t~~~gl~~~~~~g--~~~---~~~ 250 (330)
T 3hxj_A 185 GKDGTIYFG-S--DKVYAIN-PDGTEKWNFYAGYW-----TVTRPAISEDGTIYVTSLDGHLYAINPDG--TEK---WRF 250 (330)
T ss_dssp CTTCCEEEE-S--SSEEEEC-TTSCEEEEECCSSC-----CCSCCEECTTSCEEEEETTTEEEEECTTS--CEE---EEE
T ss_pred cCCCEEEEE-e--CEEEEEC-CCCcEEEEEccCCc-----ceeceEECCCCeEEEEcCCCeEEEECCCC--CEe---EEe
Confidence 456665544 4 7799999 67766655543322 57788889988877777888898887432 211 111
Q ss_pred eccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEe
Q 022019 215 KGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWD 294 (304)
Q Consensus 215 ~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd 294 (304)
.. ....+.++.+.+ ++ .|.+++.+|.|..+|. +++.+..+......+.++...++|. |+.++ .+|.+++..
T Consensus 251 ~~----~~~~~~~~~~~~-~g-~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~-l~~gt-~~G~~~~~~ 321 (330)
T 3hxj_A 251 KT----GKRIESSPVIGN-TD-TIYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGT-IYFGT-RNGKFYALF 321 (330)
T ss_dssp EC----SSCCCSCCEECT-TS-CEEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCC-EEEEC-TTSCEEEEE
T ss_pred eC----CCCccccceEcC-CC-eEEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCE-EEEEc-CCCeEEEEe
Confidence 11 112233445555 44 5677888889999996 6776666665556677888888887 55577 799999887
Q ss_pred cccc
Q 022019 295 LRKA 298 (304)
Q Consensus 295 ~~~~ 298 (304)
....
T Consensus 322 ~~~~ 325 (330)
T 3hxj_A 322 NLEH 325 (330)
T ss_dssp C---
T ss_pred cccc
Confidence 7554
No 245
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.78 E-value=2.6e-07 Score=69.80 Aligned_cols=145 Identities=11% Similarity=0.128 Sum_probs=95.3
Q ss_pred CccEEEEEeCCC--CEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-cCCeEEEEEcCCCCccceeee
Q 022019 137 TSCVFASTTRDH--PIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGRDFEKYS 212 (304)
Q Consensus 137 ~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~v~d~~~~~~~~~~~~ 212 (304)
++.++.+++.+| .|+.+|+.+++....+.... ........+++..|+ +. .++.+.+||..+. +.+.
T Consensus 52 ~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~------~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~----~~~~ 121 (262)
T 3nol_A 52 NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK------RYFGEGISDWKDKIVGLTWKNGLGFVWNIRNL----RQVR 121 (262)
T ss_dssp TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT------TCCEEEEEEETTEEEEEESSSSEEEEEETTTC----CEEE
T ss_pred CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC------ccceeEEEEeCCEEEEEEeeCCEEEEEECccC----cEEE
Confidence 567777887776 89999999999988877543 232322233455666 44 7999999999764 2222
Q ss_pred eeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEecccc-----CCeEEEEECCCCcEEEEeeccC
Q 022019 213 TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQE-----GGVTHVQFSRDGNYLYTGGRKD 287 (304)
Q Consensus 213 ~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~~~d 287 (304)
.+... + ....++++++ .|+.+..++.|.++|..+.+.+.++.... ..++.+.|. +|+ |++....+
T Consensus 122 ti~~~--~-----eG~glt~dg~-~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~-lyan~w~~ 191 (262)
T 3nol_A 122 SFNYD--G-----EGWGLTHNDQ-YLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGE-IFANVWQT 191 (262)
T ss_dssp EEECS--S-----CCCCEEECSS-CEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTE-EEEEETTS
T ss_pred EEECC--C-----CceEEecCCC-EEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCE-EEEEEccC
Confidence 32211 1 1223335344 44444557889999999998888776422 335667886 675 44444378
Q ss_pred CeEEEEecccceee
Q 022019 288 PYILCWDLRKAVQV 301 (304)
Q Consensus 288 ~~i~vwd~~~~~~~ 301 (304)
+.|.+.|.++|+.+
T Consensus 192 ~~I~vIDp~tG~V~ 205 (262)
T 3nol_A 192 NKIVRIDPETGKVT 205 (262)
T ss_dssp SEEEEECTTTCBEE
T ss_pred CeEEEEECCCCcEE
Confidence 89999999998764
No 246
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.77 E-value=3.1e-05 Score=62.26 Aligned_cols=200 Identities=10% Similarity=0.011 Sum_probs=117.3
Q ss_pred CceeEEEEcCCCCe-EEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCC-Cc
Q 022019 61 NFLKGIKWSPDGSS-FLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDP-TS 138 (304)
Q Consensus 61 ~~V~~i~~s~~~~~-l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~ 138 (304)
..+..++|++.... +++-...+.|..+++....... +....- -.|..+++++ .+
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~-----------------~~~~~~-------~~p~glavd~~~g 128 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEE-----------------VVSTGL-------ESPGGLAVDWVHD 128 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE-----------------EECSSC-------SCCCEEEEETTTT
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCCceE-----------------EEeCCC-------CCccEEEEecCCC
Confidence 44788999975554 4454567888888876432110 000000 1233344454 44
Q ss_pred cEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-cC-CeEEEEEcCCCCccceeeeeee
Q 022019 139 CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YN-KSVRVFDVHRPGRDFEKYSTLK 215 (304)
Q Consensus 139 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d-~~i~v~d~~~~~~~~~~~~~~~ 215 (304)
+++++-...+.|.+.++............ ......++++|.+..|+ +. .. +.|..+++.... . ..+.
T Consensus 129 ~ly~~d~~~~~I~~~~~dG~~~~~l~~~~-----l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~--~---~~~~ 198 (349)
T 3v64_C 129 KLYWTDSGTSRIEVANLDGAHRKVLLWQS-----LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG--R---RIIA 198 (349)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEECTT-----CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS--C---EESC
T ss_pred eEEEEcCCCCeEEEEcCCCCceEEEEeCC-----CCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC--c---EEEE
Confidence 55566566778999998754322222211 11567999999776666 44 44 788888876421 1 1111
Q ss_pred ccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEec
Q 022019 216 GNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDL 295 (304)
Q Consensus 216 ~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~ 295 (304)
.........++++|+++.++++-+..+.|..+|+........+...-.....+++. .+ .|+.+....+.|..++.
T Consensus 199 ---~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~-~~-~ly~td~~~~~V~~~~~ 273 (349)
T 3v64_C 199 ---DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-ED-SLYWTDWHTKSINSANK 273 (349)
T ss_dssp ---CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEE-TT-EEEEEETTTTEEEEEET
T ss_pred ---ECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEE-CC-EEEEecCCCCeEEEEEc
Confidence 11223468999998677777777778899999986543332333333456777773 34 44444437788888885
Q ss_pred ccce
Q 022019 296 RKAV 299 (304)
Q Consensus 296 ~~~~ 299 (304)
.+|+
T Consensus 274 ~~G~ 277 (349)
T 3v64_C 274 FTGK 277 (349)
T ss_dssp TTCC
T ss_pred cCCC
Confidence 5554
No 247
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.76 E-value=3.3e-05 Score=60.89 Aligned_cols=202 Identities=14% Similarity=0.086 Sum_probs=115.9
Q ss_pred CceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccE
Q 022019 61 NFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCV 140 (304)
Q Consensus 61 ~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 140 (304)
....+++|+++|+++++-..++.|..||...... ........ |..+++++++++
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~-------------------~~~~~~~~-------p~gia~~~dG~l 85 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQ-------------------IHATVEGK-------VSGLAFTSNGDL 85 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEE-------------------EEEECSSE-------EEEEEECTTSCE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCceE-------------------EEEeCCCC-------ceeEEEcCCCcE
Confidence 4578999999999777777789999998763210 11111123 334455888987
Q ss_pred EEEEeCCC--CEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEEEEEcCCCCccceeeee-ee-
Q 022019 141 FASTTRDH--PIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYST-LK- 215 (304)
Q Consensus 141 l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~v~d~~~~~~~~~~~~~-~~- 215 (304)
+++..... .|..+|..+++.......... .....++..+++..+++. .++.|+++|............. ..
T Consensus 86 ~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~----~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~ 161 (306)
T 2p4o_A 86 VATGWNADSIPVVSLVKSDGTVETLLTLPDA----IFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLAR 161 (306)
T ss_dssp EEEEECTTSCEEEEEECTTSCEEEEEECTTC----SCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSC
T ss_pred EEEeccCCcceEEEEcCCCCeEEEEEeCCCc----cccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCcccc
Confidence 66654432 477777777765433332111 123455556655555555 6889999997542100000000 00
Q ss_pred ccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCC-ceE--eEEeccccCCeEEEEECCCCcEEEEeeccCCeEEE
Q 022019 216 GNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN-MEL--LYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILC 292 (304)
Q Consensus 216 ~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~-~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~v 292 (304)
............+ +|+++.++++-+..+.|..|++.. ++. ...+.. ......++++++|++.++.. ..+.|.+
T Consensus 162 ~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~-~~~~V~~ 237 (306)
T 2p4o_A 162 SNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATH-IYNSVVR 237 (306)
T ss_dssp SSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECB-TTCCEEE
T ss_pred ccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeC-CCCeEEE
Confidence 0001111224455 785556667777788999999864 321 111111 12356789999998766555 6789999
Q ss_pred Eecc
Q 022019 293 WDLR 296 (304)
Q Consensus 293 wd~~ 296 (304)
++..
T Consensus 238 ~~~~ 241 (306)
T 2p4o_A 238 IAPD 241 (306)
T ss_dssp ECTT
T ss_pred ECCC
Confidence 9975
No 248
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.74 E-value=1.7e-05 Score=63.78 Aligned_cols=198 Identities=12% Similarity=0.014 Sum_probs=118.3
Q ss_pred CceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCC-Ccc
Q 022019 61 NFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDP-TSC 139 (304)
Q Consensus 61 ~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~ 139 (304)
+..+|.+..+++ +|+.+. ...|+..++...... ...........++| ++ ++.
T Consensus 34 d~~~C~~~~~~~-~ll~~~-~~~I~~i~~~g~~~~------------------~~~~~~~~~~~l~~-------d~~~~~ 86 (349)
T 3v64_C 34 DRRSCKALGPEP-VLLFAN-RIDIRQVLPHRSEYT------------------LLLNNLENAIALDF-------HHRREL 86 (349)
T ss_dssp TSSCEEESSSCC-EEEEEC-BSCEEEECTTSCCEE------------------EEECSCSCEEEEEE-------ETTTTE
T ss_pred CCCcccccccCc-eeEeec-ccceEEEeCCCCeeE------------------EeecCCCceEEEEE-------eccccE
Confidence 445666666644 444333 345777776533211 11122234556666 43 444
Q ss_pred EEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-cCCeEEEEEcCCCCccceeeeeeecc
Q 022019 140 VFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGRDFEKYSTLKGN 217 (304)
Q Consensus 140 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~v~d~~~~~~~~~~~~~~~~~ 217 (304)
++++-...+.|+.+++..+.......... .....+++++.+..|+ +. ..+.|.++++..... ..+.
T Consensus 87 ly~~D~~~~~I~r~~~~g~~~~~~~~~~~-----~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~-----~~l~-- 154 (349)
T 3v64_C 87 VFWSDVTLDRILRANLNGSNVEEVVSTGL-----ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR-----KVLL-- 154 (349)
T ss_dssp EEEEETTTTEEEEEETTSCSCEEEECSSC-----SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC-----EEEE--
T ss_pred EEEEeccCCceEEEecCCCCceEEEeCCC-----CCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCce-----EEEE--
Confidence 55555567889999987655333322111 1456899998666665 54 678999999864211 1111
Q ss_pred ccccccceeEEEeecCCCcEEEEEecC-CeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEecc
Q 022019 218 KEGQAGIMSAIAFSPTHTGMLAIGSYS-QTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 218 ~~~~~~~v~~~~~~p~~~~~l~~~~~d-g~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~ 296 (304)
.........++++|.++.++++-..+ +.|..+++........+...-.....++++|++..|+.+....+.|..+++.
T Consensus 155 -~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~d 233 (349)
T 3v64_C 155 -WQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD 233 (349)
T ss_dssp -CTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred -eCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence 11223468899999677677776666 8899998864332222222234578999999888787776467889999986
Q ss_pred cc
Q 022019 297 KA 298 (304)
Q Consensus 297 ~~ 298 (304)
..
T Consensus 234 G~ 235 (349)
T 3v64_C 234 GS 235 (349)
T ss_dssp SC
T ss_pred CC
Confidence 43
No 249
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.73 E-value=1.4e-05 Score=65.20 Aligned_cols=201 Identities=9% Similarity=0.026 Sum_probs=117.5
Q ss_pred CCceeEEEEcCCCC-eEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCC-
Q 022019 60 NNFLKGIKWSPDGS-SFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPT- 137 (304)
Q Consensus 60 ~~~V~~i~~s~~~~-~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~- 137 (304)
...+..++|++.+. ++++-...+.|..+++....... +. ..+ ...|..+++++.
T Consensus 115 ~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~-----------------~~-~~~------~~~p~glavd~~~ 170 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEE-----------------VV-STG------LESPGGLAVDWVH 170 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEE-----------------EE-CSS------CSCCCCEEEETTT
T ss_pred CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEE-----------------EE-eCC------CCCccEEEEEeCC
Confidence 34577899997544 44455567888888876432100 00 000 013344455654
Q ss_pred ccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-cC-CeEEEEEcCCCCccceeeeee
Q 022019 138 SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YN-KSVRVFDVHRPGRDFEKYSTL 214 (304)
Q Consensus 138 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d-~~i~v~d~~~~~~~~~~~~~~ 214 (304)
+.++++-...+.|.+.++........+... ......++++|.+..|+ +. .. +.|..+++.... .. .+
T Consensus 171 g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~-----l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~--~~---~~ 240 (386)
T 3v65_B 171 DKLYWTDSGTSRIEVANLDGAHRKVLLWQS-----LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG--RR---II 240 (386)
T ss_dssp TEEEEEETTTTEEEECBTTSCSCEEEECSS-----CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS--CE---EE
T ss_pred CeEEEEcCCCCeEEEEeCCCCceEEeecCC-----CCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCC--cE---EE
Confidence 455555556778888887644322222211 12567999999877776 43 44 788888876421 11 11
Q ss_pred eccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEe
Q 022019 215 KGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWD 294 (304)
Q Consensus 215 ~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd 294 (304)
. .........++|+|+++.++++-+..+.|..+|+........+.........+++. .+...++-. ..+.|..++
T Consensus 241 ~---~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~-~~~~V~~~~ 315 (386)
T 3v65_B 241 A---DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDW-HTKSINSAN 315 (386)
T ss_dssp E---CSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEE-TTEEEEEET-TTTEEEEEE
T ss_pred E---ECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEE-CCEEEEeeC-CCCeEEEEE
Confidence 1 11123467899998677777777778899999986543333333333456778883 344444444 788898888
Q ss_pred cccce
Q 022019 295 LRKAV 299 (304)
Q Consensus 295 ~~~~~ 299 (304)
..+|+
T Consensus 316 ~~~G~ 320 (386)
T 3v65_B 316 KFTGK 320 (386)
T ss_dssp TTTCC
T ss_pred CCCCc
Confidence 55553
No 250
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.67 E-value=2e-05 Score=64.28 Aligned_cols=158 Identities=12% Similarity=-0.021 Sum_probs=99.6
Q ss_pred CeEEEEeecCccceeCC-CccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-cCCeE
Q 022019 120 ESVYDFCWFPHMSASDP-TSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSV 196 (304)
Q Consensus 120 ~~v~~~~~~~~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~i 196 (304)
.....++| ++ ++.++++-...+.|+.+++..+.....+.... .....+++++.+..|+ +- ..+.|
T Consensus 116 ~~~~gl~~-------d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~-----~~p~glavd~~~g~lY~~d~~~~~I 183 (386)
T 3v65_B 116 ENAIALDF-------HHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGL-----ESPGGLAVDWVHDKLYWTDSGTSRI 183 (386)
T ss_dssp SCEEEEEE-------ETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSC-----SCCCCEEEETTTTEEEEEETTTTEE
T ss_pred CccEEEEE-------ecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCC-----CCccEEEEEeCCCeEEEEcCCCCeE
Confidence 34556666 43 44555555567889999987665433322111 1446789998666665 54 67788
Q ss_pred EEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecC-CeEEEEecCCceEeEEeccccCCeEEEEECC
Q 022019 197 RVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS-QTSAIYREDNMELLYVLHGQEGGVTHVQFSR 275 (304)
Q Consensus 197 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d-g~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~ 275 (304)
.++++.... . ..+. .........++++|.++.++++-... +.|..+++............-.....++|+|
T Consensus 184 ~~~~~dg~~--~---~~l~---~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~ 255 (386)
T 3v65_B 184 EVANLDGAH--R---KVLL---WQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDY 255 (386)
T ss_dssp EECBTTSCS--C---EEEE---CSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEG
T ss_pred EEEeCCCCc--e---EEee---cCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeC
Confidence 888876421 1 1111 11223468899999667666666555 7899998865433322333334578999998
Q ss_pred CCcEEEEeeccCCeEEEEeccc
Q 022019 276 DGNYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 276 ~~~~l~~~~~~d~~i~vwd~~~ 297 (304)
++..|+.+....+.|..+++..
T Consensus 256 ~~~~lY~aD~~~~~I~~~d~dG 277 (386)
T 3v65_B 256 AGRRMYWVDAKHHVIERANLDG 277 (386)
T ss_dssp GGTEEEEEETTTTEEEEECTTS
T ss_pred CCCEEEEEECCCCEEEEEeCCC
Confidence 8887777764678899999864
No 251
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.67 E-value=4.8e-06 Score=68.95 Aligned_cols=156 Identities=16% Similarity=0.164 Sum_probs=99.2
Q ss_pred cCccceeCC-CccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-c-CC----eEEEEE
Q 022019 128 FPHMSASDP-TSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-Y-NK----SVRVFD 200 (304)
Q Consensus 128 ~~~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~-d~----~i~v~d 200 (304)
.|..++++| ++..|.++...+.|+.+|+..+........ . .....++|+++++.|+++ . ++ .+.+++
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~-~-----~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~ 211 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSG-L-----SKVRTICWTHEADSMIITNDQNNNDRPNNYILT 211 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECC-C-----SCEEEEEECTTSSEEEEEECCSCTTSEEEEEEE
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecC-C-----CCcceEEEeCCCCEEEEEeCCCCcccceEEEEe
Confidence 566777887 355565555558899999987765443331 1 267899999999966644 2 22 344444
Q ss_pred cCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEec-cccCCeEEEEECCCCcE
Q 022019 201 VHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH-GQEGGVTHVQFSRDGNY 279 (304)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~ 279 (304)
.... +.....+. .......++++|+++.++++-..++.|..++...+....... +.......++|+|+|++
T Consensus 212 ~~g~---~~~~~~l~-----~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~ 283 (430)
T 3tc9_A 212 RESG---FKVITELT-----KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNY 283 (430)
T ss_dssp GGGT---SCSEEEEE-----ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSE
T ss_pred CCCc---eeeeeeec-----cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCE
Confidence 3221 11001111 112356788999667777777778999999998765422222 12234689999999997
Q ss_pred EEEeeccCCeEEEEeccc
Q 022019 280 LYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 280 l~~~~~~d~~i~vwd~~~ 297 (304)
|+.+....+.|..++...
T Consensus 284 lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 284 AYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp EEEEETTTTEEEEEEEET
T ss_pred EEEEECCCCEEEEEeCCc
Confidence 766654788999988763
No 252
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.65 E-value=1.8e-06 Score=68.68 Aligned_cols=142 Identities=10% Similarity=0.077 Sum_probs=91.9
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccceeeeee
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTL 214 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~~~ 214 (304)
.+++. +..++.++.|..+|.. ++....+..... .+.++..++++..++++ +.+..+| ..+.. . ...
T Consensus 145 ~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~-----~~~~~~~d~~g~l~v~t--~~l~~~d-~~g~~-~---~~~ 210 (330)
T 3hxj_A 145 SEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDA-----ITSAASIGKDGTIYFGS--DKVYAIN-PDGTE-K---WNF 210 (330)
T ss_dssp CTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSC-----CCSCCEECTTCCEEEES--SSEEEEC-TTSCE-E---EEE
T ss_pred cCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCC-----ceeeeEEcCCCEEEEEe--CEEEEEC-CCCcE-E---EEE
Confidence 44555 5567778889999988 776655554332 56677888888866655 8899999 43221 1 111
Q ss_pred eccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEe
Q 022019 215 KGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWD 294 (304)
Q Consensus 215 ~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd 294 (304)
......+.++...+ ++ .+.+++.++.|..+|. +++.+..+......+.++.+.++|. |+.++ .+|.|..+|
T Consensus 211 ----~~~~~~~~~~~~~~-~g-~l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t-~~ggl~~~d 281 (330)
T 3hxj_A 211 ----YAGYWTVTRPAISE-DG-TIYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTDT-IYFGS-YDGHLYAIN 281 (330)
T ss_dssp ----CCSSCCCSCCEECT-TS-CEEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTSC-EEEEC-TTCEEEEEC
T ss_pred ----ccCCcceeceEECC-CC-eEEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCCe-EEEec-CCCCEEEEC
Confidence 11224467778887 44 4566777888988885 5566666654444445566666665 66676 788899999
Q ss_pred ccccee
Q 022019 295 LRKAVQ 300 (304)
Q Consensus 295 ~~~~~~ 300 (304)
. +++.
T Consensus 282 ~-~g~~ 286 (330)
T 3hxj_A 282 P-DGTE 286 (330)
T ss_dssp T-TSCE
T ss_pred C-CCcE
Confidence 6 5544
No 253
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.65 E-value=5.7e-06 Score=62.01 Aligned_cols=144 Identities=12% Similarity=0.101 Sum_probs=94.2
Q ss_pred ccEEEEEeCCC--CEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-cCCeEEEEEcCCCCccceeeee
Q 022019 138 SCVFASTTRDH--PIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGRDFEKYST 213 (304)
Q Consensus 138 ~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~v~d~~~~~~~~~~~~~ 213 (304)
+.++.+.+.+| .|+.+|+.+++........... .-..+++. +..|+ .. .++.+.+||..+. +.+..
T Consensus 31 ~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~----fgeGi~~~--~~~ly~ltw~~~~v~v~D~~tl----~~~~t 100 (243)
T 3mbr_X 31 GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPY----FGAGIVAW--RDRLIQLTWRNHEGFVYDLATL----TPRAR 100 (243)
T ss_dssp TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTC----CEEEEEEE--TTEEEEEESSSSEEEEEETTTT----EEEEE
T ss_pred CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCc----ceeEEEEe--CCEEEEEEeeCCEEEEEECCcC----cEEEE
Confidence 55667767654 8999999999998887765421 11234443 55566 44 8999999999763 22333
Q ss_pred eeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEecccc-----CCeEEEEECCCCcEEEEeeccCC
Q 022019 214 LKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQE-----GGVTHVQFSRDGNYLYTGGRKDP 288 (304)
Q Consensus 214 ~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~~~d~ 288 (304)
+... + .+ ..++ ++++.+ +++..++.|.++|..+.+.+.++.... ..++.+.|. +|+..+..- .+.
T Consensus 101 i~~~--~-~G--wglt--~dg~~L-~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw-~s~ 170 (243)
T 3mbr_X 101 FRYP--G-EG--WALT--SDDSHL-YMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVW-LTS 170 (243)
T ss_dssp EECS--S-CC--CEEE--ECSSCE-EEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEET-TTT
T ss_pred EeCC--C-Cc--eEEe--eCCCEE-EEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEEC-CCC
Confidence 3221 1 11 2343 534444 445568899999999998888876422 245677776 666444444 678
Q ss_pred eEEEEecccceee
Q 022019 289 YILCWDLRKAVQV 301 (304)
Q Consensus 289 ~i~vwd~~~~~~~ 301 (304)
.|.+.|.++|+.+
T Consensus 171 ~I~vIDp~tG~V~ 183 (243)
T 3mbr_X 171 RIARIDPASGKVV 183 (243)
T ss_dssp EEEEECTTTCBEE
T ss_pred eEEEEECCCCCEE
Confidence 9999999999764
No 254
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.64 E-value=8.7e-07 Score=67.03 Aligned_cols=144 Identities=12% Similarity=0.088 Sum_probs=95.8
Q ss_pred CccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-cCCeEEEEEcCCCCccceeeeee
Q 022019 137 TSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGRDFEKYSTL 214 (304)
Q Consensus 137 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~v~d~~~~~~~~~~~~~~ 214 (304)
++.++++.+.+|.|+.+|+.+++....+ .... .....+++. +..|+ +. .++.+.+||..+. +.+..+
T Consensus 64 ~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~----~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~Tl----~~~~ti 132 (268)
T 3nok_A 64 QGHFFESTGHQGTLRQLSLESAQPVWME-RLGN----IFAEGLASD--GERLYQLTWTEGLLFTWSGMPP----QRERTT 132 (268)
T ss_dssp TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTT----CCEEEEEEC--SSCEEEEESSSCEEEEEETTTT----EEEEEE
T ss_pred CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCC----cceeEEEEe--CCEEEEEEccCCEEEEEECCcC----cEEEEE
Confidence 4567888888899999999999988877 4331 012345554 44555 34 8999999999763 222333
Q ss_pred eccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEecccc-----CCeEEEEECCCCcEEEEeeccCCe
Q 022019 215 KGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQE-----GGVTHVQFSRDGNYLYTGGRKDPY 289 (304)
Q Consensus 215 ~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~~~d~~ 289 (304)
... + . -..++ ++++ .|+.+..++.|.++|..+.+.+.++.... ..++.+.|. +|+ |++....++.
T Consensus 133 ~~~--~-e--GwGLt--~Dg~-~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~-lyanvw~s~~ 202 (268)
T 3nok_A 133 RYS--G-E--GWGLC--YWNG-KLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGV-IYANIWHSSD 202 (268)
T ss_dssp ECS--S-C--CCCEE--EETT-EEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE-EEEEETTCSE
T ss_pred eCC--C-c--eeEEe--cCCC-EEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCE-EEEEECCCCe
Confidence 221 1 1 12344 4244 55555668999999999998888876322 245778887 775 4444436889
Q ss_pred EEEEecccceee
Q 022019 290 ILCWDLRKAVQV 301 (304)
Q Consensus 290 i~vwd~~~~~~~ 301 (304)
|.+.|.++++.+
T Consensus 203 I~vIDp~TG~V~ 214 (268)
T 3nok_A 203 VLEIDPATGTVV 214 (268)
T ss_dssp EEEECTTTCBEE
T ss_pred EEEEeCCCCcEE
Confidence 999999999754
No 255
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.63 E-value=6.5e-05 Score=59.49 Aligned_cols=151 Identities=15% Similarity=0.032 Sum_probs=90.7
Q ss_pred CCC-ccEEEEEeCCCCEEEEEcCCC---eeeEEeecccccccccceEEEEECCCCcEEE-EE-cCCeEEEEEcCCCCccc
Q 022019 135 DPT-SCVFASTTRDHPIHLWDATTG---LLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGRDF 208 (304)
Q Consensus 135 ~~~-~~~l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~v~d~~~~~~~~ 208 (304)
++. +.++++-...+.|+.+++... .....+.... .....++++++.+..|+ +- ..+.|.++|+... ..
T Consensus 38 d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~----~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~--~~ 111 (316)
T 1ijq_A 38 EVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD----IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV--KR 111 (316)
T ss_dssp ETTTTEEEEEETTTTEEEEEEC--------CEEEECSS----CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS--SE
T ss_pred EeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCC----CCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC--ce
Confidence 544 445555556788999998751 2222221111 11456899997665555 54 7789999998642 11
Q ss_pred eeeeeeeccccccccceeEEEeecCCCcEEEEEecC-CeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccC
Q 022019 209 EKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS-QTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKD 287 (304)
Q Consensus 209 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d-g~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d 287 (304)
. .+. .........++++|.++.++++.... +.|..+++............-.....++++|++..|+.+....
T Consensus 112 ~---~~~---~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~ 185 (316)
T 1ijq_A 112 K---TLF---RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKL 185 (316)
T ss_dssp E---EEE---ECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred E---EEE---ECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCC
Confidence 1 111 11123468899999666666665444 7898888754322222222234578999999888887776467
Q ss_pred CeEEEEeccc
Q 022019 288 PYILCWDLRK 297 (304)
Q Consensus 288 ~~i~vwd~~~ 297 (304)
+.|..+|+..
T Consensus 186 ~~I~~~d~dg 195 (316)
T 1ijq_A 186 HSISSIDVNG 195 (316)
T ss_dssp TEEEEEETTS
T ss_pred CeEEEEecCC
Confidence 7999999864
No 256
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.60 E-value=0.00014 Score=60.25 Aligned_cols=163 Identities=12% Similarity=0.105 Sum_probs=97.9
Q ss_pred ecCccceeCC-CccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-cCCeEEEEEcCC
Q 022019 127 WFPHMSASDP-TSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHR 203 (304)
Q Consensus 127 ~~~~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~v~d~~~ 203 (304)
..|..++++| ++.++++-..++.|+.+|..++.....+..... ......++|+|+++.|+ +. ..+.|+.++...
T Consensus 228 ~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~---~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~ 304 (433)
T 4hw6_A 228 RGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDT---KGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNR 304 (433)
T ss_dssp SSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSC---CSSCEEEEECTTSSEEEEEETTTTEEEEEEBCT
T ss_pred CCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCC---CCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCC
Confidence 3466677788 677666666778899999887765222221111 11334799999999666 44 678999988763
Q ss_pred CCccceeeeeeecc--c---------cccccceeEEEe---------ecCCCcEEEEEecCCeEEEEecCCceEeEEecc
Q 022019 204 PGRDFEKYSTLKGN--K---------EGQAGIMSAIAF---------SPTHTGMLAIGSYSQTSAIYREDNMELLYVLHG 263 (304)
Q Consensus 204 ~~~~~~~~~~~~~~--~---------~~~~~~v~~~~~---------~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 263 (304)
....+.....+... . ...-.....+++ .+ ++.++++-..++.|+.++. ++... ++-+
T Consensus 305 ~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~-~g~lyvaD~~n~~I~~~~~-~G~v~-t~~G 381 (433)
T 4hw6_A 305 ETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEED-EYDFYFCDRDSHTVRVLTP-EGRVT-TYAG 381 (433)
T ss_dssp TTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSC-CEEEEEEETTTTEEEEECT-TSEEE-EEEC
T ss_pred CCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCC-CCcEEEEECCCCEEEEECC-CCCEE-EEEe
Confidence 22211111111110 0 011223567888 55 6767777777889999985 45432 3321
Q ss_pred c------------------cCCeEEEEEC-CCCcEEEEeeccCCeEEEEecc
Q 022019 264 Q------------------EGGVTHVQFS-RDGNYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 264 ~------------------~~~v~~~~~~-~~~~~l~~~~~~d~~i~vwd~~ 296 (304)
. -.....++++ ++|.++++=. .+++|+.++++
T Consensus 382 ~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~-~n~rIr~i~~e 432 (433)
T 4hw6_A 382 RGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDC-DNHRVRKIAPE 432 (433)
T ss_dssp CCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEG-GGTEEEEEEEC
T ss_pred CCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeC-CCCEEEEEecC
Confidence 1 1236789999 5565444444 77889888764
No 257
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.60 E-value=0.00016 Score=59.92 Aligned_cols=164 Identities=9% Similarity=0.099 Sum_probs=94.9
Q ss_pred cCccceeCC-CccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-cCCeEEEEEcCCC
Q 022019 128 FPHMSASDP-TSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRP 204 (304)
Q Consensus 128 ~~~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~v~d~~~~ 204 (304)
.|..++++| ++.++++-..++.|..++...+.......... ......++|+|++++|+ +. ..+.|..++....
T Consensus 227 ~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~----~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~ 302 (430)
T 3tc9_A 227 NCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQD----SGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWK 302 (430)
T ss_dssp SCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSS----SSCCEEEEECTTSSEEEEEETTTTEEEEEEEETT
T ss_pred CceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCC----CCcceeEEEcCCCCEEEEEECCCCEEEEEeCCcc
Confidence 466667788 67777776678899999988765432222211 12467899999999666 44 7889999887642
Q ss_pred Cccceeeeeeeccc--cc---------ccccee-EEEeec-------CCCcEEEEEecCCeEEEEecCCceEeEEecc--
Q 022019 205 GRDFEKYSTLKGNK--EG---------QAGIMS-AIAFSP-------THTGMLAIGSYSQTSAIYREDNMELLYVLHG-- 263 (304)
Q Consensus 205 ~~~~~~~~~~~~~~--~~---------~~~~v~-~~~~~p-------~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-- 263 (304)
...+.....+.... .+ .-.... .++..+ ..+.++++=..++.|+.++. .+......-.
T Consensus 303 ~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~-~G~v~~~~g~g~ 381 (430)
T 3tc9_A 303 TKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTP-QGRVTTFAGRGS 381 (430)
T ss_dssp TTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECT-TSEEEEEEECCT
T ss_pred cccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECC-CCcEEEEEeCCC
Confidence 11111111111110 00 011123 455532 13556666666788999984 4543322210
Q ss_pred --c----c---------CCeEEEEECCCCcEEEEeeccCCeEEEEecc
Q 022019 264 --Q----E---------GGVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 264 --~----~---------~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~ 296 (304)
. . .....++++|++..|+.+...+..|+.++++
T Consensus 382 ~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 382 NGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp TSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 0 1 1468899999544455554377888888764
No 258
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.59 E-value=4.8e-07 Score=72.94 Aligned_cols=148 Identities=12% Similarity=0.038 Sum_probs=96.8
Q ss_pred cCccceeCCCccEEEEEe----------CCCCEEEEEcCCCeeeEEeecccccc--cccceEEEEECCCCcEEEEE-c--
Q 022019 128 FPHMSASDPTSCVFASTT----------RDHPIHLWDATTGLLRCTYRAYDAVD--EITAAFSVAFNPTGTKIFAG-Y-- 192 (304)
Q Consensus 128 ~~~~~~~~~~~~~l~~~~----------~dg~i~i~d~~~~~~~~~~~~~~~~~--~~~~v~~i~~~~~~~~l~~~-~-- 192 (304)
.| .+.++|++++++++. .++.|.+||+.+++....+....... .......+.++|||++++++ .
T Consensus 67 ~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~ 145 (368)
T 1mda_H 67 LS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGS 145 (368)
T ss_dssp TC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSS
T ss_pred CC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCC
Confidence 34 456799999888886 36889999999999998887541100 00134579999999999965 2
Q ss_pred CCeEEE--EEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCC-----ceEeE----Ee
Q 022019 193 NKSVRV--FDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN-----MELLY----VL 261 (304)
Q Consensus 193 d~~i~v--~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~-----~~~~~----~~ 261 (304)
+..+.+ +|+.+ . ..+.. .+ +..+.|++...+++.+.||.+.+.|+.. ++... .+
T Consensus 146 ~~~v~V~~iD~~t----v---~~i~v--~~------~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i 210 (368)
T 1mda_H 146 SAAAGLSVPGASD----D---QLTKS--AS------CFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQ 210 (368)
T ss_dssp SCEEEEEETTTEE----E---EEEEC--SS------CCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTS
T ss_pred CCeEEEEEEchhh----c---eEEEC--CC------ceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeee
Confidence 467888 88854 1 11110 11 1223454566677778899998899886 44331 12
Q ss_pred ccccCCeEEEEECCCCcEEEEeeccCCeEEEEeccc
Q 022019 262 HGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 262 ~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~ 297 (304)
.....+. . ++++..++..+ . +.+.+.|+.+
T Consensus 211 ~vg~~P~---~-~~~~~~~~~vs-~-~~V~viD~~~ 240 (368)
T 1mda_H 211 NCSSQAA---Q-ANYPGMLVWAV-A-SSILQGDIPA 240 (368)
T ss_dssp CBCSCCE---E-ETTTTEEEECB-S-SCCEEEECCS
T ss_pred eCCCCcc---c-cccCCEEEEEc-C-CEEEEEECCC
Confidence 2223343 3 66677777777 6 8999999864
No 259
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.58 E-value=8.4e-06 Score=66.26 Aligned_cols=200 Identities=6% Similarity=0.025 Sum_probs=107.7
Q ss_pred CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeE-EEEeecCccceeCCCccEEEEEeCCCC
Q 022019 71 DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESV-YDFCWFPHMSASDPTSCVFASTTRDHP 149 (304)
Q Consensus 71 ~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~~~~~~l~~~~~dg~ 149 (304)
.+..++.++.++.|..+|..+++.............. ......+ .... .++..+++++.++.
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~--------~~~~~~~~~~~~---------~~~~~v~v~~~~g~ 114 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWF--------SKEPALLSGGVT---------VSGGHVYIGSEKAQ 114 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CC--------SCCCCCEEEEEE---------EETTEEEEEETTSE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccc--------cccCcccccCce---------EeCCEEEEEcCCCE
Confidence 4567778888999999999887654332211100000 0000111 1111 13446777888999
Q ss_pred EEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccceeeeeeecccccc-ccceeEE
Q 022019 150 IHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQ-AGIMSAI 228 (304)
Q Consensus 150 i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~-~~~v~~~ 228 (304)
|..+|..+++........... ....... ++..++.+.++.|..+|.+++..... ........ .......
T Consensus 115 l~a~d~~tG~~~W~~~~~~~~-----~~~p~~~-~~~v~v~~~~g~l~~~d~~tG~~~W~----~~~~~~~~~~~~~~~~ 184 (376)
T 3q7m_A 115 VYALNTSDGTVAWQTKVAGEA-----LSRPVVS-DGLVLIHTSNGQLQALNEADGAVKWT----VNLDMPSLSLRGESAP 184 (376)
T ss_dssp EEEEETTTCCEEEEEECSSCC-----CSCCEEE-TTEEEEECTTSEEEEEETTTCCEEEE----EECCC-----CCCCCC
T ss_pred EEEEECCCCCEEEEEeCCCce-----EcCCEEE-CCEEEEEcCCCeEEEEECCCCcEEEE----EeCCCCceeecCCCCc
Confidence 999999999887766554321 1111121 34444445899999999977532221 11100000 0000112
Q ss_pred EeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCC----eE---EEEECC--CCcEEEEeeccCCeEEEEecccce
Q 022019 229 AFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGG----VT---HVQFSR--DGNYLYTGGRKDPYILCWDLRKAV 299 (304)
Q Consensus 229 ~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~----v~---~~~~~~--~~~~l~~~~~~d~~i~vwd~~~~~ 299 (304)
... ++ .+++++.++.+..+|..+++.+......... +. .+.-.| .+..++.++ .++.|..+|.++|+
T Consensus 185 ~~~--~~-~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~-~~g~l~~~d~~tG~ 260 (376)
T 3q7m_A 185 TTA--FG-AAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALA-YNGNLTALDLRSGQ 260 (376)
T ss_dssp EEE--TT-EEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEEC-TTSCEEEEETTTCC
T ss_pred EEE--CC-EEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEe-cCcEEEEEECCCCc
Confidence 222 23 5777888999999999988877665422100 00 000111 244566666 67788888887776
Q ss_pred ee
Q 022019 300 QV 301 (304)
Q Consensus 300 ~~ 301 (304)
.+
T Consensus 261 ~~ 262 (376)
T 3q7m_A 261 IM 262 (376)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 260
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.58 E-value=0.00013 Score=57.70 Aligned_cols=205 Identities=7% Similarity=0.003 Sum_probs=116.6
Q ss_pred CCceeEEEEcCCCC-eEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCC-C
Q 022019 60 NNFLKGIKWSPDGS-SFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDP-T 137 (304)
Q Consensus 60 ~~~V~~i~~s~~~~-~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~ 137 (304)
...+.+++|++++. .+++-...+.|..+++...... .... ...... .-.|..+++++ .
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~-------------~~~~-~~~~~~------~~~p~glavd~~~ 88 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV-------------SSYD-TVISRD------IQAPDGLAVDWIH 88 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC---------------------CE-EEECSS------CSCCCEEEEETTT
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCC-------------cccE-EEEeCC------CCCcCEEEEeecC
Confidence 44578999998655 4455556789999988642100 0000 001000 01234445554 4
Q ss_pred ccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-cC-CeEEEEEcCCCCccceeeeee
Q 022019 138 SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YN-KSVRVFDVHRPGRDFEKYSTL 214 (304)
Q Consensus 138 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d-~~i~v~d~~~~~~~~~~~~~~ 214 (304)
++++++-...+.|.++++............. .....++++|.+..|+ +. .. +.|..+++.... . ..+
T Consensus 89 ~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~-----~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~--~---~~~ 158 (316)
T 1ijq_A 89 SNIYWTDSVLGTVSVADTKGVKRKTLFRENG-----SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD--I---YSL 158 (316)
T ss_dssp TEEEEEETTTTEEEEEETTSSSEEEEEECTT-----CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC--E---EEE
T ss_pred CeEEEEECCCCEEEEEeCCCCceEEEEECCC-----CCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC--e---EEE
Confidence 4555565677889999987543332222111 1567999999766666 44 33 788888875421 1 111
Q ss_pred eccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceE--eEEeccccCCeEEEEECCCCcEEEEeeccCCeEEE
Q 022019 215 KGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMEL--LYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILC 292 (304)
Q Consensus 215 ~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~v 292 (304)
. .........++++|+++.++++-+..+.|..+|+..... +......-.....+++. .+...++-. ..+.|..
T Consensus 159 ~---~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~-~~~~V~~ 233 (316)
T 1ijq_A 159 V---TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDI-INEAIFS 233 (316)
T ss_dssp E---CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEET-TTTEEEE
T ss_pred E---ECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEEC-CCCeEEE
Confidence 1 112234779999996777777777788999999864322 22211122345677774 344444444 7889999
Q ss_pred Eecccce
Q 022019 293 WDLRKAV 299 (304)
Q Consensus 293 wd~~~~~ 299 (304)
++..+|+
T Consensus 234 ~~~~~g~ 240 (316)
T 1ijq_A 234 ANRLTGS 240 (316)
T ss_dssp EETTTCC
T ss_pred EeCCCCc
Confidence 9876664
No 261
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.55 E-value=7e-05 Score=59.00 Aligned_cols=191 Identities=10% Similarity=0.075 Sum_probs=105.8
Q ss_pred CceeEEEEcCCCCeEEEecC-CC-eEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCc
Q 022019 61 NFLKGIKWSPDGSSFLTSSE-DK-TLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS 138 (304)
Q Consensus 61 ~~V~~i~~s~~~~~l~s~~~-dg-~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 138 (304)
..+.++++.++|+++++... ++ .|..++..++...... ..........++ ..+++
T Consensus 72 ~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~----------------~~~~~~~~~g~~-------~~~~~ 128 (306)
T 2p4o_A 72 GKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLL----------------TLPDAIFLNGIT-------PLSDT 128 (306)
T ss_dssp SEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEE----------------ECTTCSCEEEEE-------ESSSS
T ss_pred CCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEE----------------eCCCccccCccc-------ccCCC
Confidence 46889999999986665433 22 4666666554321100 000001111111 12344
Q ss_pred cEEEEEeCCCCEEEEEcCCCeeeEE-eecc----cccccccceEEEEECCCCcEEEEE--cCCeEEEEEcCCCCccceee
Q 022019 139 CVFASTTRDHPIHLWDATTGLLRCT-YRAY----DAVDEITAAFSVAFNPTGTKIFAG--YNKSVRVFDVHRPGRDFEKY 211 (304)
Q Consensus 139 ~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~----~~~~~~~~v~~i~~~~~~~~l~~~--~d~~i~v~d~~~~~~~~~~~ 211 (304)
..+++-..++.|+.+|...++.... .... ...........+ +|+++.|+++ ..+.|..||+...+. ....
T Consensus 129 ~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~-~~~~ 205 (306)
T 2p4o_A 129 QYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDK-PGEP 205 (306)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSC-BCCC
T ss_pred cEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCC-CCcc
Confidence 4455555678899999775532111 1100 000111134555 7888877744 678999999874211 1111
Q ss_pred eeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceE--eEEeccccCCeEEEEEC---CCCcEEEEee
Q 022019 212 STLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMEL--LYVLHGQEGGVTHVQFS---RDGNYLYTGG 284 (304)
Q Consensus 212 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~---~~~~~l~~~~ 284 (304)
..+.. ......+++++ ++.++++....+.|.++|.. ++. +..+.......++++|. |++..|+.+.
T Consensus 206 ~~~~~-----~~~P~gi~vd~-dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~ 276 (306)
T 2p4o_A 206 EIFVE-----QTNIDDFAFDV-EGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVT 276 (306)
T ss_dssp EEEEE-----SCCCSSEEEBT-TCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEE
T ss_pred EEEec-----cCCCCCeEECC-CCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEEEecccCCCCEEEEEC
Confidence 11110 12356789999 56677776678899999975 544 22344333568999998 8988887766
No 262
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.55 E-value=7.9e-06 Score=71.88 Aligned_cols=209 Identities=15% Similarity=0.171 Sum_probs=120.8
Q ss_pred CCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEE
Q 022019 72 GSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIH 151 (304)
Q Consensus 72 ~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~ 151 (304)
+..++.++.++.|..+|..+++.............. ... ....+ ....+ ..+..+++++.|+.|+
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~--~~~-----~~~~~------~~~~~--~~~g~v~v~~~dg~l~ 134 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRA--GEA-----CCDAV------NRGVA--VWKGKVYVGVLDGRLE 134 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGG--GGC-----TTCSC------CCCCE--EETTEEEEECTTSEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCcccc--ccc-----cccCC------CCccE--EECCEEEEEccCCEEE
Confidence 556777778899999999988765443321100000 000 00000 00001 1345688888999999
Q ss_pred EEEcCCCeeeEEeecc-cccccccceEEEEECC---CCcEEEEE------cCCeEEEEEcCCCCccceeeeeeecccc--
Q 022019 152 LWDATTGLLRCTYRAY-DAVDEITAAFSVAFNP---TGTKIFAG------YNKSVRVFDVHRPGRDFEKYSTLKGNKE-- 219 (304)
Q Consensus 152 i~d~~~~~~~~~~~~~-~~~~~~~~v~~i~~~~---~~~~l~~~------~d~~i~v~d~~~~~~~~~~~~~~~~~~~-- 219 (304)
.+|.++|+.+..+... .. . ....+..+| ++..++.+ .++.|+.||.+++...............
T Consensus 135 AlDa~TG~~~W~~~~~~~~-~---~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~ 210 (689)
T 1yiq_A 135 AIDAKTGQRAWSVDTRADH-K---RSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPP 210 (689)
T ss_dssp EEETTTCCEEEEEECCSCT-T---SCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCC
T ss_pred EEECCCCCEeeeecCcCCC-C---CCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCccccc
Confidence 9999999988776653 11 0 001111122 45555432 2689999999886433221110000000
Q ss_pred ---------------------ccccceeEEEeecCCCcEEEEEecCCe-------------------EEEEecCCceEeE
Q 022019 220 ---------------------GQAGIMSAIAFSPTHTGMLAIGSYSQT-------------------SAIYREDNMELLY 259 (304)
Q Consensus 220 ---------------------~~~~~v~~~~~~p~~~~~l~~~~~dg~-------------------i~i~d~~~~~~~~ 259 (304)
+.......++++| ...++++++.++. |..+|.++++.+-
T Consensus 211 ~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W 289 (689)
T 1yiq_A 211 EGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDP-ELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVW 289 (689)
T ss_dssp CSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEE
T ss_pred ccccccccccccCCceeeecCCCCccccceeEcC-CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeE
Confidence 1111123678899 5567888887763 9999999999887
Q ss_pred Eecc--cc-------CCeEEEEECCCCc---EEEEeeccCCeEEEEecccceee
Q 022019 260 VLHG--QE-------GGVTHVQFSRDGN---YLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 260 ~~~~--~~-------~~v~~~~~~~~~~---~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
.+.. |. ..+.-.....+|+ .|+.++ .+|.++++|.++|+.+
T Consensus 290 ~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~-~~G~l~~lD~~tG~~l 342 (689)
T 1yiq_A 290 HYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAP-KNGFFYVIDRATGELL 342 (689)
T ss_dssp EEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECC-TTSEEEEEETTTCCEE
T ss_pred eeecCCcccccccCCCCcEEEeeccCCcEEEEEEEEC-CCCeEEEEECCCCCEe
Confidence 7763 22 1222222223565 788888 9999999999999876
No 263
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.55 E-value=0.00014 Score=59.61 Aligned_cols=207 Identities=7% Similarity=0.014 Sum_probs=116.7
Q ss_pred CCCceeEEEEcCCCCe-EEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCC-
Q 022019 59 PNNFLKGIKWSPDGSS-FLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDP- 136 (304)
Q Consensus 59 h~~~V~~i~~s~~~~~-l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~- 136 (304)
....+..|+|++.+.. +++-...+.|..+++...... .....+....-.. |..+++++
T Consensus 110 ~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~-------------~~~~~~~~~~~~~-------p~glavD~~ 169 (400)
T 3p5b_L 110 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV-------------SSYDTVISRDIQA-------PDGLAVDWI 169 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-------------------CCCEEEECSSCSC-------EEEEEEETT
T ss_pred ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCC-------------CcceEEEeCCCCC-------cccEEEEec
Confidence 3456889999985554 444455778888887642100 0000011101122 22334454
Q ss_pred CccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE--cCCeEEEEEcCCCCccceeeee
Q 022019 137 TSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG--YNKSVRVFDVHRPGRDFEKYST 213 (304)
Q Consensus 137 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~--~d~~i~v~d~~~~~~~~~~~~~ 213 (304)
.++++++-...+.|.+.++........+.... .....|+++|.+..|+ +- ..+.|...++.... .. .
T Consensus 170 ~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~-----~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~--~~---~ 239 (400)
T 3p5b_L 170 HSNIYWTDSVLGTVSVADTKGVKRKTLFRENG-----SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD--IY---S 239 (400)
T ss_dssp TTEEEEEETTTTEEEEECTTTCSEEEEEECSS-----CCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCS--CE---E
T ss_pred CCceEEEECCCCeEEEEeCCCCceEEEEeCCC-----CCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCc--cE---E
Confidence 45556666667889999987554333332211 1567999999776666 43 24788888886421 11 1
Q ss_pred eeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEecc--ccCCeEEEEECCCCcEEEEeeccCCeEE
Q 022019 214 LKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHG--QEGGVTHVQFSRDGNYLYTGGRKDPYIL 291 (304)
Q Consensus 214 ~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~d~~i~ 291 (304)
+. ...-.....++++|+++.++++-+..+.|..+|+........+.. .-....++++. +..|+.+....+.|.
T Consensus 240 ~~---~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~--~~~lywtd~~~~~V~ 314 (400)
T 3p5b_L 240 LV---TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIF 314 (400)
T ss_dssp EE---CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE--TTEEEEEESSSCSEE
T ss_pred EE---ECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe--CCEEEEecCCCCeEE
Confidence 11 112234788999986776777666778999999865433222222 22345677763 334444433678898
Q ss_pred EEeccccee
Q 022019 292 CWDLRKAVQ 300 (304)
Q Consensus 292 vwd~~~~~~ 300 (304)
.+|..+|+.
T Consensus 315 ~~~~~~G~~ 323 (400)
T 3p5b_L 315 SANRLTGSD 323 (400)
T ss_dssp EEESSSCCC
T ss_pred EEEcCCCCc
Confidence 888666643
No 264
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.54 E-value=7.9e-05 Score=66.24 Aligned_cols=206 Identities=6% Similarity=-0.021 Sum_probs=117.1
Q ss_pred CCCceeEEEEcCC-CCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCC
Q 022019 59 PNNFLKGIKWSPD-GSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPT 137 (304)
Q Consensus 59 h~~~V~~i~~s~~-~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 137 (304)
....+..|+|.+. +.++++-...+.|+.+++....... ... ..+.. -...|..+++++.
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~-------------~~~-~vi~~------~l~~P~GLAvD~~ 481 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS-------------SYD-TVISR------DIQAPDGLAVDWI 481 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC---------------------CE-EEECS------SCSCCCEEEEETT
T ss_pred CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCc-------------cee-EEEec------CCCCcceeeeeec
Confidence 3456778999884 4445555566788888876321100 000 01100 0123444555655
Q ss_pred c-cEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-c-CCeEEEEEcCCCCccceeeee
Q 022019 138 S-CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-Y-NKSVRVFDVHRPGRDFEKYST 213 (304)
Q Consensus 138 ~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~-d~~i~v~d~~~~~~~~~~~~~ 213 (304)
+ +++++-...+.|.+.++........+.... .....|+++|.+..|+ +- . .+.|...++.... . ..
T Consensus 482 ~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l-----~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~--~---~~ 551 (791)
T 3m0c_C 482 HSNIYWTDSVLGTVSVADTKGVKRKTLFRENG-----SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD--I---YS 551 (791)
T ss_dssp TTEEEEEETTTTEEEEEETTSSSEEEEEECTT-----CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC--E---EE
T ss_pred CCcEEEEecCCCeEEEEeCCCCeEEEEEeCCC-----CCcceEEEecCCCCEEEecCCCCCeEEEEecCCCc--e---EE
Confidence 5 455555667889999987544332222111 1577999999866666 43 3 3778888886421 1 11
Q ss_pred eeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEecc--ccCCeEEEEECCCCcEEEEeeccCCeEE
Q 022019 214 LKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHG--QEGGVTHVQFSRDGNYLYTGGRKDPYIL 291 (304)
Q Consensus 214 ~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~d~~i~ 291 (304)
+. .........|++++..+.++++=...+.|..+++........+.. .-....+|++. +.+|+.+....+.|.
T Consensus 552 lv---~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~--~~~lYwtD~~~~~I~ 626 (791)
T 3m0c_C 552 LV---TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIF 626 (791)
T ss_dssp EE---CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEE
T ss_pred EE---eCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEe--CCEEEEEECCCCEEE
Confidence 11 112245789999986776777666678899999865443333332 12234566663 445666554678888
Q ss_pred EEecccce
Q 022019 292 CWDLRKAV 299 (304)
Q Consensus 292 vwd~~~~~ 299 (304)
..+..+|+
T Consensus 627 ~~dk~tG~ 634 (791)
T 3m0c_C 627 SANRLTGS 634 (791)
T ss_dssp EEETTTCC
T ss_pred EEeCCCCc
Confidence 88866664
No 265
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.53 E-value=0.00018 Score=56.98 Aligned_cols=201 Identities=8% Similarity=0.047 Sum_probs=118.1
Q ss_pred ceeEEEEcCC-CCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCC-Ccc
Q 022019 62 FLKGIKWSPD-GSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDP-TSC 139 (304)
Q Consensus 62 ~V~~i~~s~~-~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~ 139 (304)
.+..++|.+. +..+.+-...+.|..+++....... .+.... ...|..+++++ .+.
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~----------------~~~~~~-------l~~p~glavd~~~g~ 92 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQ----------------NVVVSG-------LLSPDGLACDWLGEK 92 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCC----------------EEEEEC-------CSCCCEEEEETTTTE
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceE----------------EEEcCC-------CCCccEEEEEcCCCe
Confidence 4678999985 4455555667889888886432100 010000 01234445554 455
Q ss_pred EEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE--cCCeEEEEEcCCCCccceeeeeeec
Q 022019 140 VFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG--YNKSVRVFDVHRPGRDFEKYSTLKG 216 (304)
Q Consensus 140 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~--~d~~i~v~d~~~~~~~~~~~~~~~~ 216 (304)
++++-...+.|.++++............ ......++++|.+..|+ +. ..+.|..+++.... .. .+.
T Consensus 93 ly~~d~~~~~I~~~~~dG~~~~~l~~~~-----~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~--~~---~~~- 161 (318)
T 3sov_A 93 LYWTDSETNRIEVSNLDGSLRKVLFWQE-----LDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS--RF---III- 161 (318)
T ss_dssp EEEEETTTTEEEEEETTSCSCEEEECSS-----CSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS--CE---EEE-
T ss_pred EEEEECCCCEEEEEECCCCcEEEEEeCC-----CCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC--eE---EEE-
Confidence 5566566788999998654322222111 12567999999766666 43 25788888876421 11 111
Q ss_pred cccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEecc
Q 022019 217 NKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 217 ~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~ 296 (304)
...-.....++++|+++.++++=+..+.|..+|+........+.+.......+++.. +..+.+-. ..+.|..++..
T Consensus 162 --~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~-~~~~V~~~~~~ 237 (318)
T 3sov_A 162 --NSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDW-STHSILACNKY 237 (318)
T ss_dssp --CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEET-TTTEEEEEETT
T ss_pred --ECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEec-CCCeEEEEECC
Confidence 111234679999997777777777788999999864332222232334456777753 33334444 78899999987
Q ss_pred ccee
Q 022019 297 KAVQ 300 (304)
Q Consensus 297 ~~~~ 300 (304)
+|+.
T Consensus 238 ~G~~ 241 (318)
T 3sov_A 238 TGEG 241 (318)
T ss_dssp TCCS
T ss_pred CCCc
Confidence 6653
No 266
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.53 E-value=1.6e-05 Score=64.64 Aligned_cols=148 Identities=12% Similarity=0.098 Sum_probs=89.8
Q ss_pred ccEEEEEeCCCCEEEEEcCCCeeeEEeeccccccc--ccceEEEEECC--CCcEEE-EEcCCeEEEEEcCCCCccceeee
Q 022019 138 SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDE--ITAAFSVAFNP--TGTKIF-AGYNKSVRVFDVHRPGRDFEKYS 212 (304)
Q Consensus 138 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~--~~~v~~i~~~~--~~~~l~-~~~d~~i~v~d~~~~~~~~~~~~ 212 (304)
+..++++..++.+..+|..+++............. ...+..+.-.| .+..++ ++.++.+..+|.+++....
T Consensus 188 ~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w---- 263 (376)
T 3q7m_A 188 FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMW---- 263 (376)
T ss_dssp TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEE----
T ss_pred CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEe----
Confidence 34677788899999999999988766654321000 00000011111 134455 5588999999998753221
Q ss_pred eeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEecc-ccCCeEEEEECCCCcEEEEeeccCCeEE
Q 022019 213 TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHG-QEGGVTHVQFSRDGNYLYTGGRKDPYIL 291 (304)
Q Consensus 213 ~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~d~~i~ 291 (304)
... ......+... +..+++++.++.|..+|..+++.+..... ....+..... .+..|+.++ .+|.|.
T Consensus 264 ~~~------~~~~~~~~~~---~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~-~~g~l~ 331 (376)
T 3q7m_A 264 KRE------LGSVNDFIVD---GNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGD-SEGYLH 331 (376)
T ss_dssp EEC------CCCEEEEEEE---TTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEEC-TTSEEE
T ss_pred ecc------CCCCCCceEE---CCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEe-CCCeEE
Confidence 111 1112333333 33677788899999999999988776652 2222333333 256788888 899999
Q ss_pred EEecccceee
Q 022019 292 CWDLRKAVQV 301 (304)
Q Consensus 292 vwd~~~~~~~ 301 (304)
++|..+|+.+
T Consensus 332 ~~d~~tG~~~ 341 (376)
T 3q7m_A 332 WINVEDGRFV 341 (376)
T ss_dssp EEETTTCCEE
T ss_pred EEECCCCcEE
Confidence 9999998765
No 267
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.48 E-value=3.4e-05 Score=60.37 Aligned_cols=165 Identities=13% Similarity=0.094 Sum_probs=104.6
Q ss_pred cCccceeCCCc-cEEEEEeCCCCEEEEEcCCCeeeEEeecccc---cccccceEEEEE---CCCCcEEEEEc--------
Q 022019 128 FPHMSASDPTS-CVFASTTRDHPIHLWDATTGLLRCTYRAYDA---VDEITAAFSVAF---NPTGTKIFAGY-------- 192 (304)
Q Consensus 128 ~~~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~---~~~~~~v~~i~~---~~~~~~l~~~~-------- 192 (304)
.|.+..+++.. .++++.-..++|..||...+..... ..... ......+.++.| +|+++++++..
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~ 92 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFA 92 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTT
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccc
Confidence 34445555544 4444444799999999876644433 22210 111224679999 78888877543
Q ss_pred ------CCeEEEEEcC---CCCccceeeeeeeccccc-------cccceeEEEeecCCCcEEEEEecC-CeEEEEecCCc
Q 022019 193 ------NKSVRVFDVH---RPGRDFEKYSTLKGNKEG-------QAGIMSAIAFSPTHTGMLAIGSYS-QTSAIYREDNM 255 (304)
Q Consensus 193 ------d~~i~v~d~~---~~~~~~~~~~~~~~~~~~-------~~~~v~~~~~~p~~~~~l~~~~~d-g~i~i~d~~~~ 255 (304)
+..+..||+. ++..... ..+.....+ .......++..+ .++.+++++.- +.|..++....
T Consensus 93 g~~~~g~~~v~~~Dl~~~~tg~~~~~--~dL~~~~~~~~~~~g~~~~~~nDvavD~-~GnaYVt~s~~~~~I~rV~pdG~ 169 (334)
T 2p9w_A 93 DQSSHGASSFHSFNLPLSENSKPVWS--VNFEKVQDEFEKKAGKRPFGVVQSAQDR-DGNSYVAFALGMPAIARVSADGK 169 (334)
T ss_dssp SCCSSSCCEEEEEESSCCTTCCCSEE--EESHHHHHHHHHHHSSCCEEEEEEEECT-TSCEEEEEEESSCEEEEECTTSC
T ss_pred ccccCCCCEEEEEcCCcCCCCCEEEE--ecCccccccccccccccccCCceeEECC-CCCEEEeCCCCCCeEEEEeCCCC
Confidence 5789999998 4322111 111111011 123478999999 78888989988 88888887543
Q ss_pred eEeEEec------cccCCeEEEEECCCCcEEEEeeccCCeEEEEecccc
Q 022019 256 ELLYVLH------GQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 256 ~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~ 298 (304)
.+..+. ......+.|+++|+|..|++.. ..|.|..+|+++.
T Consensus 170 -~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~-~~g~L~~fD~~~p 216 (334)
T 2p9w_A 170 -TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFG-GPRALTAFDVSKP 216 (334)
T ss_dssp -CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEES-SSSSEEEEECSSS
T ss_pred -EEeeeeecCCCcccccCcceEEEeCCCCEEEEEc-CCCeEEEEcCCCC
Confidence 222221 1122467999999999999998 6999999998743
No 268
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.47 E-value=0.00025 Score=58.08 Aligned_cols=159 Identities=14% Similarity=0.021 Sum_probs=96.7
Q ss_pred CeEEEEeecCccceeCC-CccEEEEEeCCCCEEEEEcCCCe----eeEEeecccccccccceEEEEECCCCcEEE-EE-c
Q 022019 120 ESVYDFCWFPHMSASDP-TSCVFASTTRDHPIHLWDATTGL----LRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-Y 192 (304)
Q Consensus 120 ~~v~~~~~~~~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~ 192 (304)
..+..++| ++ ++.++++-...+.|+.+++.... ........ ......+++++.+..|+ +- .
T Consensus 112 ~~~~~l~~-------d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~-----~~~p~glavD~~~~~lY~~d~~ 179 (400)
T 3p5b_L 112 RNVVALDT-------EVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD-----IQAPDGLAVDWIHSNIYWTDSV 179 (400)
T ss_dssp SCEEEEEE-------ETTTTEEEEEETTTTEEEEEEC------CCCEEEECSS-----CSCEEEEEEETTTTEEEEEETT
T ss_pred CcceEEee-------eeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCC-----CCCcccEEEEecCCceEEEECC
Confidence 45566666 44 34455555567788888886521 22222211 12567899998655555 54 6
Q ss_pred CCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEec-CCeEEEEecCCceEeEEeccccCCeEEE
Q 022019 193 NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSY-SQTSAIYREDNMELLYVLHGQEGGVTHV 271 (304)
Q Consensus 193 d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~v~~~ 271 (304)
.+.|.+.++.... . ..+. .........++++|.++.++++-.. .+.|...++........+...-.....|
T Consensus 180 ~~~I~~~~~~g~~--~---~~l~---~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~gl 251 (400)
T 3p5b_L 180 LGTVSVADTKGVK--R---KTLF---RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGI 251 (400)
T ss_dssp TTEEEEECTTTCS--E---EEEE---ECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEE
T ss_pred CCeEEEEeCCCCc--e---EEEE---eCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEE
Confidence 7899999886421 1 1111 1122336899999966656655433 4789999886543333333333567899
Q ss_pred EECCCCcEEEEeeccCCeEEEEecccc
Q 022019 272 QFSRDGNYLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 272 ~~~~~~~~l~~~~~~d~~i~vwd~~~~ 298 (304)
+++|++..|+.+....+.|..+|+...
T Consensus 252 avd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (400)
T 3p5b_L 252 TLDLLSGRLYWVDSKLHSISSIDVNGG 278 (400)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred EEEeCCCEEEEEECCCCEEEEEeCCCC
Confidence 999988888877646788999998643
No 269
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.44 E-value=0.00042 Score=62.21 Aligned_cols=215 Identities=10% Similarity=0.103 Sum_probs=127.0
Q ss_pred CCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCcc
Q 022019 60 NNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSC 139 (304)
Q Consensus 60 ~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 139 (304)
...|.++...++|.+.+ |+.++-+.+||..++.......... ... ......|.++.. +++|.
T Consensus 214 ~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~----~~~------~l~~~~i~~i~~-------d~~g~ 275 (795)
T 4a2l_A 214 TKQIQAILQQSPTRIWV-ATEGAGLFLINPKTKEIKNYLHSPS----NPK------SISSNYIRSLAM-------DSQNR 275 (795)
T ss_dssp CCCEEEEEEEETTEEEE-EEBSSCEEEEETTTTEEEEECCCTT----CTT------SCSCSBEEEEEE-------CTTSC
T ss_pred CCeeEEEEEcCCCCEEE-EECCCCeEEEeCCCCeEEEeecCCC----Ccc------ccCCCeEEEEEE-------cCCCC
Confidence 45688888888776555 4444448888876543211100000 000 001245666654 55666
Q ss_pred EEEEEeCCCCEEEEEcCCCeeeEEeeccc--ccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccceeeeeeecc
Q 022019 140 VFASTTRDHPIHLWDATTGLLRCTYRAYD--AVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGN 217 (304)
Q Consensus 140 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~~~~~~ 217 (304)
+.+ |+.+| |.+||..++.......... .......|.++..+++|.+.+++.++.|..|+.... .+..+......
T Consensus 276 lWi-gt~~G-l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~--~~~~~~~~~~~ 351 (795)
T 4a2l_A 276 LWI-GTFND-LNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRN--RFKNIRNIPYK 351 (795)
T ss_dssp EEE-EESSC-EEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGGG--SSEEECCCTTS
T ss_pred EEE-EeCCh-hheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcc--cceEEcCCCCC
Confidence 544 44454 8999988776543322111 111223799999999998887777788999987542 11111111000
Q ss_pred ccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEec--------cccCCeEEEEECCCCcEEEEeeccCCe
Q 022019 218 KEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH--------GQEGGVTHVQFSRDGNYLYTGGRKDPY 289 (304)
Q Consensus 218 ~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--------~~~~~v~~~~~~~~~~~l~~~~~~d~~ 289 (304)
..-....|.++...+ ++ .|.+|+.++-|..||..++....-.. .....|.++...++|..|..|+ .++-
T Consensus 352 ~~l~~~~V~~i~~d~-~g-~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt-~~~G 428 (795)
T 4a2l_A 352 NSLSDNVVSCIVEDK-DK-NLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGT-HAGG 428 (795)
T ss_dssp SSCSCSSEEEEEECT-TS-CEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEE-TTTE
T ss_pred CCCCCCeeEEEEECC-CC-CEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEe-CcCc
Confidence 011234588888887 44 35668888889999987654322211 1235689999988998566666 6677
Q ss_pred EEEEecccce
Q 022019 290 ILCWDLRKAV 299 (304)
Q Consensus 290 i~vwd~~~~~ 299 (304)
|..||..+++
T Consensus 429 l~~~d~~~~~ 438 (795)
T 4a2l_A 429 LSILHRNSGQ 438 (795)
T ss_dssp EEEEETTTCC
T ss_pred eeEEeCCCCc
Confidence 9999987764
No 270
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.41 E-value=5.7e-05 Score=66.22 Aligned_cols=167 Identities=14% Similarity=0.104 Sum_probs=98.7
Q ss_pred eeCCCccEEEEEeCCC-------------------CEEEEEcCCCeeeEEeecccccc----cccceEEEEECCCCc---
Q 022019 133 ASDPTSCVFASTTRDH-------------------PIHLWDATTGLLRCTYRAYDAVD----EITAAFSVAFNPTGT--- 186 (304)
Q Consensus 133 ~~~~~~~~l~~~~~dg-------------------~i~i~d~~~~~~~~~~~~~~~~~----~~~~v~~i~~~~~~~--- 186 (304)
+++++..+++.+..++ .|..+|.++|+.+..++...... ...+.....+..+|+
T Consensus 236 a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~ 315 (668)
T 1kv9_A 236 AYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRK 315 (668)
T ss_dssp EEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEE
T ss_pred EEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEE
Confidence 4556667788887665 39999999999887776532100 011222223333564
Q ss_pred EEEEE-cCCeEEEEEcCCCCccceee------e-eee--------c-c-c-cc--------c--ccceeEEEeecCCCcE
Q 022019 187 KIFAG-YNKSVRVFDVHRPGRDFEKY------S-TLK--------G-N-K-EG--------Q--AGIMSAIAFSPTHTGM 237 (304)
Q Consensus 187 ~l~~~-~d~~i~v~d~~~~~~~~~~~------~-~~~--------~-~-~-~~--------~--~~~v~~~~~~p~~~~~ 237 (304)
.++.+ .+|.++++|..++....... . .+. . . . .+ . ...-..++++|+.+.+
T Consensus 316 ~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~ 395 (668)
T 1kv9_A 316 VLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLV 395 (668)
T ss_dssp EEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEE
T ss_pred EEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEE
Confidence 45554 99999999988753221000 0 000 0 0 0 00 0 0001236788844433
Q ss_pred EEEE-----------------------------------ecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEE
Q 022019 238 LAIG-----------------------------------SYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYT 282 (304)
Q Consensus 238 l~~~-----------------------------------~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 282 (304)
++.. ..+|.|..||+.+++.+-....+. ......+...+.+|+.
T Consensus 396 yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~~~~~t~gg~vf~ 474 (668)
T 1kv9_A 396 YIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPT-HWNGGTLSTAGNLVFQ 474 (668)
T ss_dssp EEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEE
T ss_pred EEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCC-CCcCceeEeCCCEEEE
Confidence 3311 123789999999999887776432 3333344456788888
Q ss_pred eeccCCeEEEEecccceee
Q 022019 283 GGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 283 ~~~~d~~i~vwd~~~~~~~ 301 (304)
++ .|+.|++||.++|+.+
T Consensus 475 g~-~dg~l~a~d~~tG~~l 492 (668)
T 1kv9_A 475 GT-AAGQMHAYSADKGEAL 492 (668)
T ss_dssp EC-TTSEEEEEETTTCCEE
T ss_pred EC-CcccchhhhhhcChhh
Confidence 98 9999999999999765
No 271
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.40 E-value=0.00031 Score=53.36 Aligned_cols=164 Identities=11% Similarity=0.109 Sum_probs=101.5
Q ss_pred CeEEEEeecCccceeCCCc-cEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cCCeEE
Q 022019 120 ESVYDFCWFPHMSASDPTS-CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVR 197 (304)
Q Consensus 120 ~~v~~~~~~~~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~ 197 (304)
..+..++| +|++ .++++...++.|...|+. ++....+..... .....|++.+++.++++. .++.+.
T Consensus 27 ~~lSGla~-------~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~----~D~EGIa~~~~g~~~vs~E~~~~l~ 94 (255)
T 3qqz_A 27 NNISSLTW-------SAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFV----KDLETIEYIGDNQFVISDERDYAIY 94 (255)
T ss_dssp SCEEEEEE-------ETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSC----SSEEEEEECSTTEEEEEETTTTEEE
T ss_pred cCcceeEE-------eCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCC----CChHHeEEeCCCEEEEEECCCCcEE
Confidence 45777777 4444 456667788999999987 887777765332 256789999999877776 778999
Q ss_pred EEEcCCCCccceeeeeeecc--ccccccceeEEEeecCCCcEEEEEecCCeEEEEecCC---ceEeEEec-------ccc
Q 022019 198 VFDVHRPGRDFEKYSTLKGN--KEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN---MELLYVLH-------GQE 265 (304)
Q Consensus 198 v~d~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~---~~~~~~~~-------~~~ 265 (304)
++++..... .......... ..........++|+|.++ .|+++.+.....||..+. ...+..+. .+.
T Consensus 95 ~~~v~~~~~-i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~-~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~ 172 (255)
T 3qqz_A 95 VISLTPNSE-VKILKKIKIPLQESPTNCGFEGLAYSRQDH-TFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTL 172 (255)
T ss_dssp EEEECTTCC-EEEEEEEECCCSSCCCSSCCEEEEEETTTT-EEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCS
T ss_pred EEEcCCCCe-eeeeeeeccccccccccCCcceEEEeCCCC-EEEEEECcCCceEEEEcccccCCceeeecchhhcccccc
Confidence 999876442 1111222111 112344578999999544 455555544445554431 11111111 123
Q ss_pred CCeEEEEECCCCcEEEEeeccCCeEEEEeccc
Q 022019 266 GGVTHVQFSRDGNYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 266 ~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~ 297 (304)
..+.+++++|....|+..+.....|.++|...
T Consensus 173 ~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g 204 (255)
T 3qqz_A 173 DDVSGAEFNQQKNTLLVLSHESRALQEVTLVG 204 (255)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEECTTC
T ss_pred CCceeEEEcCCCCeEEEEECCCCeEEEEcCCC
Confidence 35789999997666555554777888888653
No 272
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.40 E-value=9.7e-05 Score=63.48 Aligned_cols=56 Identities=7% Similarity=0.048 Sum_probs=40.7
Q ss_pred CCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEecccceee
Q 022019 244 SQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 244 dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
+|.|..||+.+++.+.++... ..+.+..+...+..++.++ .||.|+.||.++|+.+
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~v~~g~-~dg~l~a~D~~tG~~l 498 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWEK-FAAWGGTLYTKGGLVWYAT-LDGYLKALDNKDGKEL 498 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEEC-TTSEEEEEETTTCCEE
T ss_pred CCeEEEEECCCCCEEEEecCC-CCccceeEEECCCEEEEEc-CCCeEEEEECCCCCEE
Confidence 478999999999887777532 2222222233466788888 8999999999999876
No 273
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.39 E-value=0.0003 Score=55.64 Aligned_cols=159 Identities=12% Similarity=0.034 Sum_probs=96.5
Q ss_pred eEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-cCCeEEE
Q 022019 121 SVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRV 198 (304)
Q Consensus 121 ~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~v 198 (304)
....+.|.+. ++.++++-...+.|+.+++..+.....+.... .....++++++.+..|+ +- ..+.|.+
T Consensus 36 ~~~~ld~d~~------~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~----l~~p~glavd~~~g~ly~~d~~~~~I~~ 105 (318)
T 3sov_A 36 DAAAVDFVFS------HGLIYWSDVSEEAIKRTEFNKTESVQNVVVSG----LLSPDGLACDWLGEKLYWTDSETNRIEV 105 (318)
T ss_dssp EEEEEEEEGG------GTEEEEEETTTTEEEEEETTSSSCCCEEEEEC----CSCCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred ccEEEEEEeC------CCEEEEEECCCCcEEEEEccCCCceEEEEcCC----CCCccEEEEEcCCCeEEEEECCCCEEEE
Confidence 4556666332 34555555667889999987653211111111 11456899998665555 54 7789999
Q ss_pred EEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEe-cCCeEEEEecCCceEeEEeccccCCeEEEEECCCC
Q 022019 199 FDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS-YSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDG 277 (304)
Q Consensus 199 ~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~ 277 (304)
+++..... ..+. .........++++|.++.++++-. ..+.|..+++........+...-..-..++++|++
T Consensus 106 ~~~dG~~~-----~~l~---~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~ 177 (318)
T 3sov_A 106 SNLDGSLR-----KVLF---WQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEE 177 (318)
T ss_dssp EETTSCSC-----EEEE---CSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTT
T ss_pred EECCCCcE-----EEEE---eCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccC
Confidence 99864211 1111 122234688999995565555542 35789888876432222222223456899999988
Q ss_pred cEEEEeeccCCeEEEEeccc
Q 022019 278 NYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 278 ~~l~~~~~~d~~i~vwd~~~ 297 (304)
..|+.+....+.|..+|+..
T Consensus 178 ~~lY~aD~~~~~I~~~d~dG 197 (318)
T 3sov_A 178 QKLYWADAKLNFIHKSNLDG 197 (318)
T ss_dssp TEEEEEETTTTEEEEEETTS
T ss_pred CEEEEEECCCCEEEEEcCCC
Confidence 88877764778999999864
No 274
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.37 E-value=0.00014 Score=63.78 Aligned_cols=207 Identities=12% Similarity=0.047 Sum_probs=114.2
Q ss_pred EEEEcC-CCCeEEEecCCC-----------eEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccc
Q 022019 65 GIKWSP-DGSSFLTSSEDK-----------TLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMS 132 (304)
Q Consensus 65 ~i~~s~-~~~~l~s~~~dg-----------~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 132 (304)
.+++.+ +++.++.|+.++ .+.+||..++...... .....+.... ...
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~--------------~~~~~~~~~~-------~~~ 248 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRT--------------VTVTKHDMFC-------PGI 248 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCE--------------EEECSCCCSS-------CEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCc--------------ccCCCCCCcc-------ccc
Confidence 566777 888888877543 5788888766432110 0000000000 012
Q ss_pred eeCCCccEEEEEeC-CCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE--cC-----CeEEEEEcCCC
Q 022019 133 ASDPTSCVFASTTR-DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG--YN-----KSVRVFDVHRP 204 (304)
Q Consensus 133 ~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~--~d-----~~i~v~d~~~~ 204 (304)
++..++++++.|+. +..+.+||..+.+....-..... ..-.++...+++++++.| .+ ..+.+||..+.
T Consensus 249 ~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~----R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~ 324 (656)
T 1k3i_A 249 SMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVA----RGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSK 324 (656)
T ss_dssp EECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSC----CSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTT
T ss_pred cCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCcc----ccccceEEecCCeEEEEeCcccCCcccccceEeCCCCC
Confidence 33568889999984 55899999987764432221111 122356666788888854 33 56899998753
Q ss_pred Cccceeee-----eeecc-------c-------ccc---------------------------------------cccee
Q 022019 205 GRDFEKYS-----TLKGN-------K-------EGQ---------------------------------------AGIMS 226 (304)
Q Consensus 205 ~~~~~~~~-----~~~~~-------~-------~~~---------------------------------------~~~v~ 226 (304)
. ...+. .+... . .+. ...-.
T Consensus 325 ~--W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~ 402 (656)
T 1k3i_A 325 T--WTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGN 402 (656)
T ss_dssp E--EEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCE
T ss_pred c--ceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCc
Confidence 1 11110 00000 0 000 00112
Q ss_pred EEEeecCCCcEEEEEecCC-----------eEEEEecCCceEeEEe--ccccC-CeEEEEECCCCcEEEEeeccC-----
Q 022019 227 AIAFSPTHTGMLAIGSYSQ-----------TSAIYREDNMELLYVL--HGQEG-GVTHVQFSRDGNYLYTGGRKD----- 287 (304)
Q Consensus 227 ~~~~~p~~~~~l~~~~~dg-----------~i~i~d~~~~~~~~~~--~~~~~-~v~~~~~~~~~~~l~~~~~~d----- 287 (304)
++.|...++++++.|+.++ .|.+||..+..-.... ..+.. .-.++...|+|+.++.|| .+
T Consensus 403 av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG-~~~~~~~ 481 (656)
T 1k3i_A 403 AVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGG-QRRGIPF 481 (656)
T ss_dssp EEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECC-BSBCCTT
T ss_pred eEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECC-cccCcCc
Confidence 3344444677888887543 6888888765533322 11222 234556778999999998 44
Q ss_pred ------CeEEEEecccce
Q 022019 288 ------PYILCWDLRKAV 299 (304)
Q Consensus 288 ------~~i~vwd~~~~~ 299 (304)
..+.+||..+.+
T Consensus 482 ~~~~~~~~v~~ydp~t~~ 499 (656)
T 1k3i_A 482 EDSTPVFTPEIYVPEQDT 499 (656)
T ss_dssp CCCSBCCCCEEEEGGGTE
T ss_pred CCCCcccceEEEcCCCCc
Confidence 468999987765
No 275
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.32 E-value=3.8e-05 Score=63.60 Aligned_cols=154 Identities=13% Similarity=0.097 Sum_probs=94.4
Q ss_pred cCccceeCCC---ccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcCC-----eEEEE
Q 022019 128 FPHMSASDPT---SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNK-----SVRVF 199 (304)
Q Consensus 128 ~~~~~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~-----~i~v~ 199 (304)
.|..++++|+ +.+++ +...+.|+.+|+.++......... .....++++++|+++++...+ .+..+
T Consensus 140 ~P~gvavd~~s~~g~Lyv-~D~~~~I~~id~~~g~v~~~~~~~------~~P~giavd~dG~lyVad~~~~~~~~gv~~~ 212 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYW-VGQRDAFRHVDFVNQYVDIKTTNI------GQCADVNFTLNGDMVVVDDQSSDTNTGIYLF 212 (433)
T ss_dssp CCCEEEECTTTTTCEEEE-ECBTSCEEEEETTTTEEEEECCCC------SCEEEEEECTTCCEEEEECCSCTTSEEEEEE
T ss_pred CCceEEEccccCCCEEEE-EeCCCCEEEEECCCCEEEEeecCC------CCccEEEECCCCCEEEEcCCCCcccceEEEE
Confidence 4666777874 55444 443388999999877765443311 157899999999944444321 23333
Q ss_pred EcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEe-c-cccCCeEEEEECCCC
Q 022019 200 DVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVL-H-GQEGGVTHVQFSRDG 277 (304)
Q Consensus 200 d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~-~~~~~v~~~~~~~~~ 277 (304)
+.... +.....+. .......++++|.++.++++-..++.|+.+|..++.....+ . +....-..++|+|+|
T Consensus 213 ~~~~~---~~~~~~~~-----~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG 284 (433)
T 4hw6_A 213 TRASG---FTERLSLC-----NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTG 284 (433)
T ss_dssp CGGGT---TCCEEEEE-----ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTS
T ss_pred ECCCC---eecccccc-----ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCC
Confidence 33211 11001110 12235678899966667666667889999998866552222 2 112234579999999
Q ss_pred cEEEEeeccCCeEEEEecc
Q 022019 278 NYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 278 ~~l~~~~~~d~~i~vwd~~ 296 (304)
++|+.+....+.|+.+++.
T Consensus 285 ~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 285 DWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp SEEEEEETTTTEEEEEEBC
T ss_pred CEEEEEeCCCCEEEEEeCC
Confidence 9777666467899998865
No 276
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.31 E-value=0.00011 Score=61.25 Aligned_cols=159 Identities=14% Similarity=0.149 Sum_probs=98.0
Q ss_pred CccceeCCC-c-cEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEE-------CCCCcEEEEE-cCC----
Q 022019 129 PHMSASDPT-S-CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAF-------NPTGTKIFAG-YNK---- 194 (304)
Q Consensus 129 ~~~~~~~~~-~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~-------~~~~~~l~~~-~d~---- 194 (304)
|..++++|. . +++++-...+.|++.|+.++.......... ........++| ++++..|+++ ..+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~--~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~ 218 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINT--IPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGD 218 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTT--SSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGG
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCc--cccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcc
Confidence 556677873 4 444444445679999998877665444321 12225789999 9999866644 222
Q ss_pred ---eEEEEEcCCCCcccee---eeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecC-------CceE----
Q 022019 195 ---SVRVFDVHRPGRDFEK---YSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED-------NMEL---- 257 (304)
Q Consensus 195 ---~i~v~d~~~~~~~~~~---~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~-------~~~~---- 257 (304)
.|.+++....+ .+.. ...+. . ......++++|+++.++++-..++.|..+|+. ++..
T Consensus 219 ~~~~V~~i~r~~~G-~~~~~~~~~~v~-~----~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~ 292 (496)
T 3kya_A 219 ESPSVYIIKRNADG-TFDDRSDIQLIA-A----YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPI 292 (496)
T ss_dssp GEEEEEEEECCTTS-CCSTTSCEEEEE-E----ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCB
T ss_pred cCceEEEEecCCCC-ceeecccceeec-c----CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccc
Confidence 26677633311 1110 01111 1 11245788999777778888888999999987 4432
Q ss_pred ----------eEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEecc
Q 022019 258 ----------LYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 258 ----------~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~ 296 (304)
+... +.....+.++|+|+|++|+.+.....+|+.++..
T Consensus 293 ~~~~~g~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 293 VKNNPNTFKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp GGGCTTTEEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ccccccccceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 2222 2234568999999999766665367889886654
No 277
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.31 E-value=0.0015 Score=58.67 Aligned_cols=211 Identities=8% Similarity=0.105 Sum_probs=123.9
Q ss_pred CCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCcc
Q 022019 60 NNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSC 139 (304)
Q Consensus 60 ~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 139 (304)
...|.++...++|.+. .|+.++-|..|+..++....-..... ... .......|.++.. +++++
T Consensus 356 ~~~V~~i~~d~~g~lW-iGt~~~Gl~~~~~~~~~~~~~~~~~~----~~~-----~~l~~~~v~~i~~-------d~~g~ 418 (795)
T 4a2l_A 356 DNVVSCIVEDKDKNLW-IGTNDGGLNLYNPITQRFTSYTLQED----ESA-----RGIGSNNIKAVYV-------DEKKS 418 (795)
T ss_dssp CSSEEEEEECTTSCEE-EEESSSCEEEECTTTCCEEEECCC---------------CCSCSCEEEEEE-------ETTTT
T ss_pred CCeeEEEEECCCCCEE-EEECCCCeEEEcCCCCcEEEEecCCC----Ccc-----cCCCCccEEEEEE-------cCCCC
Confidence 4569999998888644 46777779999887543311100000 000 0001245666654 45677
Q ss_pred EEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccceeeeeeecccc
Q 022019 140 VFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKE 219 (304)
Q Consensus 140 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~ 219 (304)
.|..|+.++-|..+|..+++.......... .....|.++..+++|.+.+++. +.+.+||..+. .+..+........
T Consensus 419 ~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~-l~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~--~~~~~~~~~~~~~ 494 (795)
T 4a2l_A 419 LVYIGTHAGGLSILHRNSGQVENFNQRNSQ-LVNENVYAILPDGEGNLWLGTL-SALVRFNPEQR--SFTTIEKEKDGTP 494 (795)
T ss_dssp EEEEEETTTEEEEEETTTCCEEEECTTTSC-CSCSCEEEEEECSSSCEEEEES-SCEEEEETTTT--EEEECCBCTTCCB
T ss_pred EEEEEeCcCceeEEeCCCCcEEEeecCCCC-cCCCeeEEEEECCCCCEEEEec-CceeEEeCCCC--eEEEccccccccc
Confidence 466677766699999887765432211111 1223789999999988777665 56889997652 1111110000001
Q ss_pred ccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEec-------cccCCeEEEEECCCCcEEEEeeccCCeEEE
Q 022019 220 GQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH-------GQEGGVTHVQFSRDGNYLYTGGRKDPYILC 292 (304)
Q Consensus 220 ~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~~d~~i~v 292 (304)
-....|.++...+ ++.+ ..|+. +-+..||..+++. .+. .....|.++...++|...+++. . -|..
T Consensus 495 ~~~~~i~~i~~d~-~g~l-Wigt~-~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~--~-Gl~~ 566 (795)
T 4a2l_A 495 VVSKQITTLFRDS-HKRL-WIGGE-EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVGTR--E-GFYC 566 (795)
T ss_dssp CCCCCEEEEEECT-TCCE-EEEES-SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEES--S-CEEE
T ss_pred cCCceEEEEEECC-CCCE-EEEeC-CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC--C-Ccee
Confidence 1234588888888 5544 44555 5688899876654 222 1235799999999998655443 3 4778
Q ss_pred Eecccce
Q 022019 293 WDLRKAV 299 (304)
Q Consensus 293 wd~~~~~ 299 (304)
||..+++
T Consensus 567 ~d~~~~~ 573 (795)
T 4a2l_A 567 FNEKDKQ 573 (795)
T ss_dssp EETTTTE
T ss_pred ECCCCCc
Confidence 8876654
No 278
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.31 E-value=0.00066 Score=60.41 Aligned_cols=149 Identities=14% Similarity=0.026 Sum_probs=93.0
Q ss_pred CccEEEEEeCCCCEEEEEcCCC----eeeEEeecccccccccceEEEEECCCCcEEE-EE-cCCeEEEEEcCCCCcccee
Q 022019 137 TSCVFASTTRDHPIHLWDATTG----LLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGRDFEK 210 (304)
Q Consensus 137 ~~~~l~~~~~dg~i~i~d~~~~----~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~v~d~~~~~~~~~~ 210 (304)
++.++++-...+.|+.+++... .....+... ......|++++.+..|+ +- ..+.|.+.++.... .
T Consensus 435 ~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~-----l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~--~-- 505 (791)
T 3m0c_C 435 SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD-----IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK--R-- 505 (791)
T ss_dssp TTEEEEEETTTTEEEEEEC--------CEEEECSS-----CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS--E--
T ss_pred CCeeEEeeccceeEEEEeccCCCCCcceeEEEecC-----CCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCe--E--
Confidence 4455555556678888888643 112222211 11556899998887676 44 77899999987421 1
Q ss_pred eeeeeccccccccceeEEEeecCCCcEEEEEecC-CeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCe
Q 022019 211 YSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS-QTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPY 289 (304)
Q Consensus 211 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d-g~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~ 289 (304)
..+. .........|+++|..+.++++-..+ +.|...++........+...-.....|++++.+..|+.+....+.
T Consensus 506 -~~l~---~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~ 581 (791)
T 3m0c_C 506 -KTLF---RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 581 (791)
T ss_dssp -EEEE---ECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred -EEEE---eCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCc
Confidence 1111 11223478999999656666655443 789999986544433344333567899999888888877646778
Q ss_pred EEEEecccc
Q 022019 290 ILCWDLRKA 298 (304)
Q Consensus 290 i~vwd~~~~ 298 (304)
|...++...
T Consensus 582 I~~~d~dG~ 590 (791)
T 3m0c_C 582 ISSIDVNGG 590 (791)
T ss_dssp EEEEETTSC
T ss_pred EEEEecCCC
Confidence 998888543
No 279
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.29 E-value=7.8e-05 Score=65.39 Aligned_cols=211 Identities=14% Similarity=0.117 Sum_probs=119.1
Q ss_pred CCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCCEE
Q 022019 72 GSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIH 151 (304)
Q Consensus 72 ~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~ 151 (304)
+..++.++.++.|..+|..+++................. ....+ ....++ .+..+++++.|+.|.
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~-------~~~~~------~~~~~~--~~~~v~v~~~dg~l~ 130 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTS-------CCDAV------NRGVAL--WGDKVYVGTLDGRLI 130 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGC-------TTCSC------CCCCEE--EBTEEEEECTTSEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccc-------cccCC------ccceEE--ECCEEEEEcCCCEEE
Confidence 456667777889999999888765443321100000000 00000 000011 344677888899999
Q ss_pred EEEcCCCeeeEEeecccccccccceE-EEEECCCCcEEEEEc------CCeEEEEEcCCCCccceeeeeeecccc-----
Q 022019 152 LWDATTGLLRCTYRAYDAVDEITAAF-SVAFNPTGTKIFAGY------NKSVRVFDVHRPGRDFEKYSTLKGNKE----- 219 (304)
Q Consensus 152 i~d~~~~~~~~~~~~~~~~~~~~~v~-~i~~~~~~~~l~~~~------d~~i~v~d~~~~~~~~~~~~~~~~~~~----- 219 (304)
.+|..+|+.+..+....... ...+. ...+ .++..++... ++.|+.+|.+++...............
T Consensus 131 alD~~tG~~~W~~~~~~~~~-~~~~~~~P~v-~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~ 208 (668)
T 1kv9_A 131 ALDAKTGKAIWSQQTTDPAK-PYSITGAPRV-VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHP 208 (668)
T ss_dssp EEETTTCCEEEEEECSCTTS-SCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSH
T ss_pred EEECCCCCEeeeeccCCCCC-cceecCCCEE-ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCcccccc
Confidence 99999999887776532100 00111 0011 1344444222 589999999876433221110000000
Q ss_pred ------------------ccccceeEEEeecCCCcEEEEEecCC-------------------eEEEEecCCceEeEEec
Q 022019 220 ------------------GQAGIMSAIAFSPTHTGMLAIGSYSQ-------------------TSAIYREDNMELLYVLH 262 (304)
Q Consensus 220 ------------------~~~~~v~~~~~~p~~~~~l~~~~~dg-------------------~i~i~d~~~~~~~~~~~ 262 (304)
+.......++++| ...+++.++.++ .|..+|.++++.+-.+.
T Consensus 209 ~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~ 287 (668)
T 1kv9_A 209 ELREAAKTWQGDQYWKLGGGGTVWDSMAYDP-ELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQ 287 (668)
T ss_dssp HHHHHHTTCCSSCHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEE
T ss_pred ccccccccCCccceeeeCCCCccccceEEcC-CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEee
Confidence 0111123578888 555777777766 39999999999887776
Q ss_pred c--cc-------CCeEEEEECCCCc---EEEEeeccCCeEEEEecccceee
Q 022019 263 G--QE-------GGVTHVQFSRDGN---YLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 263 ~--~~-------~~v~~~~~~~~~~---~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
. |. .+.....+..+|+ .|+.++ .+|.++++|..+|+.+
T Consensus 288 ~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~-~~G~l~~lD~~tG~~l 337 (668)
T 1kv9_A 288 VTPGDSWDFTATQQITLAELNIDGKPRKVLMQAP-KNGFFYVLDRTNGKLI 337 (668)
T ss_dssp SSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECC-TTSEEEEEETTTCCEE
T ss_pred cCCCccccccCCCCcEEEEeccCCcEEEEEEEEC-CCCEEEEEECCCCCEe
Confidence 3 22 2222233333665 688888 9999999999999876
No 280
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.28 E-value=1.1e-05 Score=71.11 Aligned_cols=206 Identities=8% Similarity=-0.012 Sum_probs=114.2
Q ss_pred CceeEEEEcCCCCeEEEe-cCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCC-Cc
Q 022019 61 NFLKGIKWSPDGSSFLTS-SEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDP-TS 138 (304)
Q Consensus 61 ~~V~~i~~s~~~~~l~s~-~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~ 138 (304)
..+..|+|++.+..|+.+ ...+.|..+++.......... .... .-...|..+++++ .+
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~--------------~~i~------~~~~~P~glavD~~~g 465 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYD--------------TVIS------RDIQAPDGLAVDWIHS 465 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCC--------------CBCC------SCC--CCCEECCCSSS
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceE--------------EEEe------CCCCCcceEEEEeeCC
Confidence 346788999866655544 456788888876411000000 0000 0001244445564 34
Q ss_pred cEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE--c-CCeEEEEEcCCCCccceeeeeee
Q 022019 139 CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG--Y-NKSVRVFDVHRPGRDFEKYSTLK 215 (304)
Q Consensus 139 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~--~-d~~i~v~d~~~~~~~~~~~~~~~ 215 (304)
+++++-...+.|.++++........+.... .....|+++|.+.+|+.+ . .+.|.++++..... . .+.
T Consensus 466 ~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~-----~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~--~---~l~ 535 (699)
T 1n7d_A 466 NIYWTDSVLGTVSVADTKGVKRKTLFREQG-----SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI--Y---SLV 535 (699)
T ss_dssp BCEECCTTTSCEEEEBSSSCCEEEECCCSS-----CCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC--C---EES
T ss_pred cEEEEeccCCeEEEEecCCCceEEEEeCCC-----CCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe--e---EEE
Confidence 555555567889999987554332222111 145688999976666633 2 37788887754211 1 111
Q ss_pred ccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEec--cccCCeEEEEECCCCcEEEEeeccCCeEEEE
Q 022019 216 GNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH--GQEGGVTHVQFSRDGNYLYTGGRKDPYILCW 293 (304)
Q Consensus 216 ~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vw 293 (304)
.........|+|+|+++.++++-+..+.|..+++........+. ..-.....|++..+ .|+.+....+.|..+
T Consensus 536 ---~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~--~lywtd~~~~~V~~~ 610 (699)
T 1n7d_A 536 ---TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED--KVFWTDIINEAIFSA 610 (699)
T ss_dssp ---CSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT--EEEEECSTTTCEEEE
T ss_pred ---eCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC--EEEEEeCCCCeEEEE
Confidence 11123467899999777787877778899999986533222222 11122345555443 444443367899999
Q ss_pred ecccceee
Q 022019 294 DLRKAVQV 301 (304)
Q Consensus 294 d~~~~~~~ 301 (304)
+..+|+.+
T Consensus 611 d~~~G~~~ 618 (699)
T 1n7d_A 611 NRLTGSDV 618 (699)
T ss_dssp ETTTEEEE
T ss_pred EccCCCce
Confidence 98776543
No 281
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.24 E-value=0.001 Score=52.66 Aligned_cols=196 Identities=12% Similarity=0.181 Sum_probs=112.4
Q ss_pred CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCcc---EEEEEe-C
Q 022019 71 DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSC---VFASTT-R 146 (304)
Q Consensus 71 ~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---~l~~~~-~ 146 (304)
..++++.....+-+.+||+ +++....+. ...+..+...|.. .-.|+ ++++.. .
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~-------------------~g~~nnVD~r~~~---~l~g~~~dla~as~R~ 95 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYN-------------------TGKLNNVDIRYDF---PLNGKKVDIAAASNRS 95 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEEC-------------------CSCEEEEEEEEEE---EETTEEEEEEEEEECS
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEcc-------------------CCCcccEEEeccc---ccCCceEeEEEEeCCC
Confidence 3456666667788999999 444322211 1233333333211 11222 223333 3
Q ss_pred --CCCEEEEEcC--CCeeeEEeecc--cccccccceEEEEE--CCC-Cc-EEEEE-cCCeEEEEEcCCCC---ccceeee
Q 022019 147 --DHPIHLWDAT--TGLLRCTYRAY--DAVDEITAAFSVAF--NPT-GT-KIFAG-YNKSVRVFDVHRPG---RDFEKYS 212 (304)
Q Consensus 147 --dg~i~i~d~~--~~~~~~~~~~~--~~~~~~~~v~~i~~--~~~-~~-~l~~~-~d~~i~v~d~~~~~---~~~~~~~ 212 (304)
+++|.+|++. ++. +..+... ........++.+++ +|. +. ++++. .+|.+..|++.... ...+...
T Consensus 96 ~~~n~l~vf~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR 174 (355)
T 3amr_A 96 EGKNTIEIYAIDGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVR 174 (355)
T ss_dssp TTCCEEEEEEECTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEE
T ss_pred CCCCeEEEEEECCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEE
Confidence 5789999774 333 3333110 00001125677777 774 44 45554 88999999985321 1222222
Q ss_pred eeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecC-----CceEeEEec-cc-cCCeEEEEE--CCCCc-EEEE
Q 022019 213 TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED-----NMELLYVLH-GQ-EGGVTHVQF--SRDGN-YLYT 282 (304)
Q Consensus 213 ~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~-----~~~~~~~~~-~~-~~~v~~~~~--~~~~~-~l~~ 282 (304)
.+. ..+.+..|...+ ....|+++-++.-|..|+.+ +++.+..+. ++ ...+..|++ .++++ ||++
T Consensus 175 ~f~-----lgsq~EgcvvDd-~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLiv 248 (355)
T 3amr_A 175 AFK-----MNSQTEGMAADD-EYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMA 248 (355)
T ss_dssp EEE-----CSSCEEEEEEET-TTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEE
T ss_pred Eec-----CCCCcceEEEcC-CCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEE
Confidence 222 124578899998 56688889888778888855 345665553 22 236788887 56666 7777
Q ss_pred eeccCCeEEEEecc
Q 022019 283 GGRKDPYILCWDLR 296 (304)
Q Consensus 283 ~~~~d~~i~vwd~~ 296 (304)
++..++++.+||..
T Consensus 249 SsQG~~s~~Vydr~ 262 (355)
T 3amr_A 249 SSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEGGGTEEEEEESS
T ss_pred EcCCCCEEEEEECC
Confidence 77678899999997
No 282
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.19 E-value=0.00013 Score=64.98 Aligned_cols=149 Identities=12% Similarity=0.073 Sum_probs=84.5
Q ss_pred eC-CCccEEEEEeC-CC----CEEEEEcCCC-eeeEE-eecccccccccceEEEEECCCCcEEE-EEcC-----CeEEEE
Q 022019 134 SD-PTSCVFASTTR-DH----PIHLWDATTG-LLRCT-YRAYDAVDEITAAFSVAFNPTGTKIF-AGYN-----KSVRVF 199 (304)
Q Consensus 134 ~~-~~~~~l~~~~~-dg----~i~i~d~~~~-~~~~~-~~~~~~~~~~~~v~~i~~~~~~~~l~-~~~d-----~~i~v~ 199 (304)
+| |||++|+.+.. +| .|+++|+.++ +.+.. +.. ...++.|+|||+.|+ +..+ ..|+++
T Consensus 181 ~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~--------~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~ 252 (751)
T 2xe4_A 181 PAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG--------TNGEIVWGPDHTSLFYVTKDETLRENKVWRH 252 (751)
T ss_dssp ECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE--------ECSCCEECSSTTEEEEEEECTTCCEEEEEEE
T ss_pred ecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC--------ceeeEEEecCCCEEEEEEECCCCCCCEEEEE
Confidence 38 89998876543 33 4999999988 63211 110 234789999998887 4443 257778
Q ss_pred EcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEec---CCeEEEEecCCc--eE-eEEe-ccccCCeEEEE
Q 022019 200 DVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSY---SQTSAIYREDNM--EL-LYVL-HGQEGGVTHVQ 272 (304)
Q Consensus 200 d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~---dg~i~i~d~~~~--~~-~~~~-~~~~~~v~~~~ 272 (304)
++.++......+. . .........+.|+| ++++|+..+. ...|+++|+.++ .. +..+ ........++.
T Consensus 253 ~lgt~~~~~~lv~--~---~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~ 326 (751)
T 2xe4_A 253 VMGKLQSEDVCLY--E---EHNPLFSAFMYKAA-DTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQ 326 (751)
T ss_dssp ETTSCGGGCEEEE--E---CCCTTCEEEEEECT-TSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEE
T ss_pred ECCCCchhcEEEE--e---cCCCceEEEEEECC-CCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEe
Confidence 8765321111111 1 11123356789999 4555554442 345888898765 22 1333 33445566676
Q ss_pred ECCCCcEEEEeeccC----CeEEEEeccc
Q 022019 273 FSRDGNYLYTGGRKD----PYILCWDLRK 297 (304)
Q Consensus 273 ~~~~~~~l~~~~~~d----~~i~vwd~~~ 297 (304)
|+..+.+++.+. .+ ..|..+++.+
T Consensus 327 ~~~g~~l~~~t~-~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 327 MHGTSHLVILTN-EGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp EETTTEEEEEEC-TTTCTTCEEEEEETTS
T ss_pred eeeCCEEEEEeC-CCCCCCcEEEEEcCCC
Confidence 654444444443 43 3677777764
No 283
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.18 E-value=0.0015 Score=51.97 Aligned_cols=147 Identities=9% Similarity=0.028 Sum_probs=80.4
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccceeeeee
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTL 214 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~~~ 214 (304)
.+++.+++++. +|.++.-+-..+..-..+... ....+..+.+.+++..++++.+|.+++.+... +... ..+
T Consensus 171 ~~~~~~~~~g~-~G~~~~S~d~gG~tW~~~~~~----~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~-G~tW---~~~ 241 (327)
T 2xbg_A 171 SPSGEYVAVSS-RGSFYSTWEPGQTAWEPHNRT----TSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDN-SENW---GEL 241 (327)
T ss_dssp CTTSCEEEEET-TSSEEEEECTTCSSCEEEECC----SSSCEEEEEECTTSCEEEEETTTEEEEEETTE-EEEE---CCC
T ss_pred cCCCcEEEEEC-CCcEEEEeCCCCCceeECCCC----CCCccceeEECCCCCEEEEeCCceEEEecCCC-CCee---Eec
Confidence 56777776654 454443321112222222111 12267889999999888888888887764221 1111 111
Q ss_pred eccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEec---cccCCeEEEEECCCCcEEEEeeccCCeEE
Q 022019 215 KGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH---GQEGGVTHVQFSRDGNYLYTGGRKDPYIL 291 (304)
Q Consensus 215 ~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~~d~~i~ 291 (304)
..........+.++.+.| ++.+++++ .+|.| ++..+.++.-..+. .....+.++.|.+++. +++++ .+|.|.
T Consensus 242 ~~~~~~~~~~~~~v~~~~-~~~~~~~g-~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G-~~G~i~ 316 (327)
T 2xbg_A 242 LSPLRRNSVGFLDLAYRT-PNEVWLAG-GAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILG-QKGILL 316 (327)
T ss_dssp BCTTSSCCSCEEEEEESS-SSCEEEEE-STTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEEC-STTEEE
T ss_pred cCCcccCCcceEEEEecC-CCEEEEEe-CCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEc-CCceEE
Confidence 110001223478888988 56566655 46766 34444454433333 2345678898876655 55566 689877
Q ss_pred EEec
Q 022019 292 CWDL 295 (304)
Q Consensus 292 vwd~ 295 (304)
-++-
T Consensus 317 ~~~~ 320 (327)
T 2xbg_A 317 RYVT 320 (327)
T ss_dssp EECC
T ss_pred EEcC
Confidence 6653
No 284
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.17 E-value=0.00094 Score=57.56 Aligned_cols=56 Identities=13% Similarity=0.090 Sum_probs=39.1
Q ss_pred CCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEecccceee
Q 022019 244 SQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQV 301 (304)
Q Consensus 244 dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~ 301 (304)
+|.|..||+.+++.+-+... ..++..-.....+..++.++ .|+.|+.||.++|+.+
T Consensus 452 ~G~l~A~D~~tG~~~W~~~~-~~~~~~g~~~tagg~vf~gt-~dg~l~A~D~~tG~~l 507 (599)
T 1w6s_A 452 LGQIKAYNAITGDYKWEKME-RFAVWGGTMATAGDLVFYGT-LDGYLKARDSDTGDLL 507 (599)
T ss_dssp CEEEEEECTTTCCEEEEEEE-SSCCCSBCEEETTTEEEEEC-TTSEEEEEETTTCCEE
T ss_pred cCeEEEEECCCCCEEeEecC-CCCccCcceEecCCEEEEEC-CCCeEEEEECCCCCEE
Confidence 47888999999887766642 11221111222467788888 8999999999999876
No 285
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.15 E-value=0.0015 Score=56.15 Aligned_cols=166 Identities=13% Similarity=0.114 Sum_probs=89.5
Q ss_pred CCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeC-----
Q 022019 72 GSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTR----- 146 (304)
Q Consensus 72 ~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~----- 146 (304)
+..++.++.|+.|..+|..+++............ ...+ .-.|. +. ++ .+++++.
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~-------------~~~~---~~~P~---v~-~g-~v~vg~~~~~~~ 173 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKV-------------GSTL---TQAPF---VA-KD-TVLMGCSGAELG 173 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGG-------------TCBC---CSCCE---EE-TT-EEEEECBCGGGT
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCc-------------ccee---ccCCE---EE-CC-EEEEEecCCccC
Confidence 4467777788999999988876643322111000 0000 00000 00 33 3444443
Q ss_pred -CCCEEEEEcCCCeeeEEeecccccc---------------------------------cccceEEEEECCCCcEEEEE-
Q 022019 147 -DHPIHLWDATTGLLRCTYRAYDAVD---------------------------------EITAAFSVAFNPTGTKIFAG- 191 (304)
Q Consensus 147 -dg~i~i~d~~~~~~~~~~~~~~~~~---------------------------------~~~~v~~i~~~~~~~~l~~~- 191 (304)
++.|+.+|..+|+.+..+....... .......++++++...++.+
T Consensus 174 ~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~ 253 (571)
T 2ad6_A 174 VRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGS 253 (571)
T ss_dssp CCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEEC
T ss_pred CCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEEC
Confidence 7899999999999887765432110 00000235677766666644
Q ss_pred cC----------------CeEEEEEcCCCCccceeeeeeecc----ccccccceeEEEeecCCC---cEEEEEecCCeEE
Q 022019 192 YN----------------KSVRVFDVHRPGRDFEKYSTLKGN----KEGQAGIMSAIAFSPTHT---GMLAIGSYSQTSA 248 (304)
Q Consensus 192 ~d----------------~~i~v~d~~~~~~~~~~~~~~~~~----~~~~~~~v~~~~~~p~~~---~~l~~~~~dg~i~ 248 (304)
.+ +.|..+|.+++..... ...... ......++ -+...+ ++ .+++.++.+|.++
T Consensus 254 g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~--~~~~~~d~~d~~~~~~p~-l~~~~~-~G~~~~~v~~~~~~G~l~ 329 (571)
T 2ad6_A 254 GNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWG--YQKTPHDEWDFAGVNQMV-LTDQPV-NGKMTPLLSHIDRNGILY 329 (571)
T ss_dssp CCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEE--EESSTTCSSCCCCCCCCE-EEEEEE-TTEEEEEEEEECTTSEEE
T ss_pred CCCccccCCccCCCceeEEEEEEEecCCCcEEEE--ecCCCCcccccccCCCCE-EEeccc-CCcEEEEEEEeCCCcEEE
Confidence 21 3589999887532221 111000 00111222 122234 34 4677889999999
Q ss_pred EEecCCceEeEEec
Q 022019 249 IYREDNMELLYVLH 262 (304)
Q Consensus 249 i~d~~~~~~~~~~~ 262 (304)
++|..+++.+..+.
T Consensus 330 ~lD~~tG~~~w~~~ 343 (571)
T 2ad6_A 330 TLNRENGNLIVAEK 343 (571)
T ss_dssp EEETTTCCEEEEEE
T ss_pred EEECCCCCEEeeec
Confidence 99999998876654
No 286
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=98.12 E-value=0.00072 Score=54.72 Aligned_cols=153 Identities=16% Similarity=0.254 Sum_probs=95.6
Q ss_pred CccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCcccee------
Q 022019 137 TSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEK------ 210 (304)
Q Consensus 137 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~------ 210 (304)
+|..++.+- ++.||..++..+..-+.+...... ....+..+..+|+|++||...+..|.|..+..+......
T Consensus 31 n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i-~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~ 108 (452)
T 3pbp_A 31 NGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHL-VLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDA 108 (452)
T ss_dssp TTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTC-CCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHT
T ss_pred CCCEEEEEE-CCEEEEEECCCCCcceEEecCccc-ccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccccc
Confidence 454555543 477888888754433444433100 011567899999999999888889999998732211110
Q ss_pred ee--eee--ccccccccceeEEEeecCC--CcEEEEEecCCeEEEEecCCc--eEeEEec---------cccCCeEEEEE
Q 022019 211 YS--TLK--GNKEGQAGIMSAIAFSPTH--TGMLAIGSYSQTSAIYREDNM--ELLYVLH---------GQEGGVTHVQF 273 (304)
Q Consensus 211 ~~--~~~--~~~~~~~~~v~~~~~~p~~--~~~l~~~~~dg~i~i~d~~~~--~~~~~~~---------~~~~~v~~~~~ 273 (304)
+. ... ........+|..+.|||-+ +..|++-..|+.|++||+... +|. .++ .....|.+++|
T Consensus 109 ~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~F 187 (452)
T 3pbp_A 109 FQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEF 187 (452)
T ss_dssp TEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEE
T ss_pred cceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEE
Confidence 01 111 0111135679999999943 348999999999999999752 233 332 22257899999
Q ss_pred CCCCcEEEE--eeccCCeEEEE
Q 022019 274 SRDGNYLYT--GGRKDPYILCW 293 (304)
Q Consensus 274 ~~~~~~l~~--~~~~d~~i~vw 293 (304)
.+++-.|+. .. .+|-|+-.
T Consensus 188 g~~~lTLYvl~~t-~~GDIYAl 208 (452)
T 3pbp_A 188 SKDGLTLYCLNTT-EGGDIFAF 208 (452)
T ss_dssp CTTSSCEEEEECT-TSCEEEEE
T ss_pred cCCCcEEEEEecC-CCCCEEEE
Confidence 998876666 54 56766654
No 287
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.11 E-value=0.0026 Score=56.97 Aligned_cols=205 Identities=11% Similarity=0.074 Sum_probs=118.8
Q ss_pred CCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCc
Q 022019 59 PNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS 138 (304)
Q Consensus 59 h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 138 (304)
....|.++...++|.+.+ |+.++-+..++..++........ ......|.++.. ++++
T Consensus 405 ~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~---------------~~~~~~v~~i~~-------d~~g 461 (781)
T 3v9f_A 405 LSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQIIELE---------------KNELLDVRVFYE-------DKNK 461 (781)
T ss_dssp CCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEECCST---------------TTCCCCEEEEEE-------CTTS
T ss_pred CCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEEeccC---------------CCCCCeEEEEEE-------CCCC
Confidence 346788998888876554 66666788888765432111000 001234555544 5566
Q ss_pred cEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccceeeeeeeccc
Q 022019 139 CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNK 218 (304)
Q Consensus 139 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~ 218 (304)
.+.+ |+.. -|..+|..+++................|.++..+++|.+.+++.++.+..||.... .+ .......
T Consensus 462 ~lwi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~--~~---~~~~~~~ 534 (781)
T 3v9f_A 462 KIWI-GTHA-GVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQ--LV---RKFNQYE 534 (781)
T ss_dssp EEEE-EETT-EEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCC--EE---EEECTTT
T ss_pred CEEE-EECC-ceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCC--eE---EEccCCC
Confidence 5444 4454 48899988765543322211001123788999999998887776556888887642 11 1121111
Q ss_pred cccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccc----cCCeEEEEECCCCcEEEEeeccCCeEEEEe
Q 022019 219 EGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQ----EGGVTHVQFSRDGNYLYTGGRKDPYILCWD 294 (304)
Q Consensus 219 ~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd 294 (304)
.-....|.++...+ ++. |..|+.+|.|..||..+++. ..+... ...|.++...++|.+.++ + .+| |..++
T Consensus 535 ~l~~~~i~~i~~d~-~g~-lWi~T~~Glv~~~d~~~~~~-~~~~~~~gl~~~~i~~i~~d~~g~lW~~-t-~~G-l~~~~ 608 (781)
T 3v9f_A 535 GFCSNTINQIYRSS-KGQ-MWLATGEGLVCFPSARNFDY-QVFQRKEGLPNTHIRAISEDKNGNIWAS-T-NTG-ISCYI 608 (781)
T ss_dssp TCSCSCEEEEEECT-TSC-EEEEETTEEEEESCTTTCCC-EEECGGGTCSCCCCCEEEECSSSCEEEE-C-SSC-EEEEE
T ss_pred CCCCCeeEEEEECC-CCC-EEEEECCCceEEECCCCCcE-EEccccCCCCCceEEEEEECCCCCEEEE-c-CCc-eEEEE
Confidence 11234588888888 554 44455566658899876542 233211 235788999988875554 4 455 66677
Q ss_pred cccce
Q 022019 295 LRKAV 299 (304)
Q Consensus 295 ~~~~~ 299 (304)
..+++
T Consensus 609 ~~~~~ 613 (781)
T 3v9f_A 609 TSKKC 613 (781)
T ss_dssp TTTTE
T ss_pred CCCCc
Confidence 66543
No 288
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.10 E-value=0.0012 Score=52.78 Aligned_cols=195 Identities=11% Similarity=0.111 Sum_probs=103.9
Q ss_pred CceeEEEEcCCCCeEEEec------------CCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeec
Q 022019 61 NFLKGIKWSPDGSSFLTSS------------EDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWF 128 (304)
Q Consensus 61 ~~V~~i~~s~~~~~l~s~~------------~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 128 (304)
...-+|...|+|..+++++ .+|.|.++|+++...... .+..... ....-.|+
T Consensus 50 ~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~---------------~l~~~g~-~~~~~~f~ 113 (355)
T 3sre_A 50 NGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVS---------------ELEIIGN-TLDISSFN 113 (355)
T ss_dssp SCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEE---------------ECEEECS-SCCGGGCC
T ss_pred CCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceE---------------EEEccCC-CCCcCcee
Confidence 3456777888886666552 689999999874321100 0110000 00001234
Q ss_pred CccceeCC--Cc--cEEEEEeC--CCCEEEEEcCCCe-eeEEeecccccccccceEEEEECCCCcEEEEEc---------
Q 022019 129 PHMSASDP--TS--CVFASTTR--DHPIHLWDATTGL-LRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGY--------- 192 (304)
Q Consensus 129 ~~~~~~~~--~~--~~l~~~~~--dg~i~i~d~~~~~-~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~--------- 192 (304)
|+.+.+.+ ++ .++++-.. +.+|-+|++..+. ....+..... ......+.+.+.++|.+.++..
T Consensus 114 PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g-~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~ 192 (355)
T 3sre_A 114 PHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRH-KLLPSVNDIVAVGPEHFYATNDHYFIDPYLK 192 (355)
T ss_dssp EEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECC-TTCSSEEEEEEEETTEEEEEESCSCSSHHHH
T ss_pred eeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEecccc-CCCCCCceEEEeCCCCEEecCCcEeCCcccc
Confidence 44444322 33 24444333 4567787776432 1111211111 2233678999999998777542
Q ss_pred ---------CCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCC-ce--EeEE
Q 022019 193 ---------NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN-ME--LLYV 260 (304)
Q Consensus 193 ---------d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~-~~--~~~~ 260 (304)
.|.|+-+|.. .. ..+. ..-...+.++|+|++..++++-+..+.|+.|++.. ++ ....
T Consensus 193 ~~e~~~~~~~g~vyr~d~~----~~---~~~~----~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~ 261 (355)
T 3sre_A 193 SWEMHLGLAWSFVTYYSPN----DV---RVVA----EGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRV 261 (355)
T ss_dssp HHHHHTTCCCEEEEEECTT----CC---EEEE----EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEE
T ss_pred cchhhccCCccEEEEEECC----eE---EEee----cCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEE
Confidence 1344444431 11 1111 11233688999996556666666789999999863 32 2223
Q ss_pred eccccCCeEEEEECC-CCcEEEEee
Q 022019 261 LHGQEGGVTHVQFSR-DGNYLYTGG 284 (304)
Q Consensus 261 ~~~~~~~v~~~~~~~-~~~~l~~~~ 284 (304)
+. ..+..-.+++.+ +|.+.+++.
T Consensus 262 ~~-~~g~PDGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 262 LS-FDTLVDNISVDPVTGDLWVGCH 285 (355)
T ss_dssp EE-CSSEEEEEEECTTTCCEEEEEE
T ss_pred Ee-CCCCCceEEEeCCCCcEEEEec
Confidence 32 245568899999 588766554
No 289
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.09 E-value=0.002 Score=50.51 Aligned_cols=180 Identities=11% Similarity=0.122 Sum_probs=100.7
Q ss_pred cCCCCceeEEEEcCCCC-eEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeC
Q 022019 57 SIPNNFLKGIKWSPDGS-SFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASD 135 (304)
Q Consensus 57 ~~h~~~V~~i~~s~~~~-~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 135 (304)
....-.--+++|.+... ++++.-..++|..|+...+..... .......... .......+.|..+ .
T Consensus 9 ~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~---------~~~~~sGl~~~~~----D 74 (334)
T 2p9w_A 9 KVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGD---------GEQQMSGLSLLTH----D 74 (334)
T ss_dssp CCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSC---------CSEEEEEEEESSS----S
T ss_pred cCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCC---------CcceeeEEEEecc----C
Confidence 34444556789988444 444444799999999874432111 0000000000 0012234444100 3
Q ss_pred CCccEEEEEe-------------CCCCEEEEEcC---CCeeeEEeecccccc--------cccceEEEEECCCCcEEEEE
Q 022019 136 PTSCVFASTT-------------RDHPIHLWDAT---TGLLRCTYRAYDAVD--------EITAAFSVAFNPTGTKIFAG 191 (304)
Q Consensus 136 ~~~~~l~~~~-------------~dg~i~i~d~~---~~~~~~~~~~~~~~~--------~~~~v~~i~~~~~~~~l~~~ 191 (304)
|+++++++.. .+..|..||+. +++............ ....+..++.+++|+..+++
T Consensus 75 ~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~ 154 (334)
T 2p9w_A 75 NSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAF 154 (334)
T ss_dssp SCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEE
T ss_pred CCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeC
Confidence 5677776543 25779999998 777665554321110 11257899999999988855
Q ss_pred -cC-CeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCC
Q 022019 192 -YN-KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN 254 (304)
Q Consensus 192 -~d-~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~ 254 (304)
.. +.|..++... .....+. ............+.|+++| ++..|++....|.+..+|+..
T Consensus 155 s~~~~~I~rV~pdG--~~~~~~~-~~~~~~~~~~G~nGIv~~p-dg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 155 ALGMPAIARVSADG--KTVSTFA-WESGNGGQRPGYSGITFDP-HSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp EESSCEEEEECTTS--CCEEEEE-ECCCCSSSCCSCSEEEEET-TTTEEEEESSSSSEEEEECSS
T ss_pred CCCCCeEEEEeCCC--CEEeeee-ecCCCcccccCcceEEEeC-CCCEEEEEcCCCeEEEEcCCC
Confidence 55 6766666543 2222111 1111112223477999999 565666665599999999874
No 290
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.09 E-value=0.0032 Score=52.58 Aligned_cols=166 Identities=10% Similarity=0.090 Sum_probs=95.7
Q ss_pred cCccceeCC-CccEEEEEeCCCCEEEEEcC-------CCee-----------eEE-eecccccccccceEEEEECCCCcE
Q 022019 128 FPHMSASDP-TSCVFASTTRDHPIHLWDAT-------TGLL-----------RCT-YRAYDAVDEITAAFSVAFNPTGTK 187 (304)
Q Consensus 128 ~~~~~~~~~-~~~~l~~~~~dg~i~i~d~~-------~~~~-----------~~~-~~~~~~~~~~~~v~~i~~~~~~~~ 187 (304)
+|..++++| ++.++++-..++.|+.+|+. ++.. ... +.... ....+.|+|+|+|+.
T Consensus 248 ~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~----~~~p~~ia~~p~G~~ 323 (496)
T 3kya_A 248 QCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIAD----PSWEFQIFIHPTGKY 323 (496)
T ss_dssp CCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSS----SSCCEEEEECTTSSE
T ss_pred CceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCC----CCCceEEEEcCCCCE
Confidence 455666788 45666666678889999987 5543 111 22111 124679999999997
Q ss_pred EEEE--cCCeEEEEEcCCCCccceeeeeeecc--ccc---------ccccee-EEEeec------CCCcEEEEEecCCeE
Q 022019 188 IFAG--YNKSVRVFDVHRPGRDFEKYSTLKGN--KEG---------QAGIMS-AIAFSP------THTGMLAIGSYSQTS 247 (304)
Q Consensus 188 l~~~--~d~~i~v~d~~~~~~~~~~~~~~~~~--~~~---------~~~~v~-~~~~~p------~~~~~l~~~~~dg~i 247 (304)
|+.+ ..+.|+.++.......+.....+... ..+ .-.... .+...+ ..+.++++=..+..|
T Consensus 324 lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rI 403 (496)
T 3kya_A 324 AYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCV 403 (496)
T ss_dssp EEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEE
T ss_pred EEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEE
Confidence 6643 77889987764321111000111110 001 111233 444541 256677777778899
Q ss_pred EEEecCCceEeEEeccc------------------------cCCeEEEEECCC-CcEEEEeeccCCeEEEEeccccee
Q 022019 248 AIYREDNMELLYVLHGQ------------------------EGGVTHVQFSRD-GNYLYTGGRKDPYILCWDLRKAVQ 300 (304)
Q Consensus 248 ~i~d~~~~~~~~~~~~~------------------------~~~v~~~~~~~~-~~~l~~~~~~d~~i~vwd~~~~~~ 300 (304)
+.++. ++. +.++-+. -.....|+++++ |.+.++=. .+.+|+.+++.....
T Consensus 404 r~i~~-~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~-~N~rIrki~~~~~~~ 478 (496)
T 3kya_A 404 RKVTP-EGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQ-VGHTIRTISMEQEEN 478 (496)
T ss_dssp EEECT-TCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEET-TTTEEEEEEECCCC-
T ss_pred EEEeC-CCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeC-CCCEEEEEECCCCcc
Confidence 99994 453 3344221 023678999997 65444444 788999999876544
No 291
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.07 E-value=0.0012 Score=52.72 Aligned_cols=145 Identities=12% Similarity=0.105 Sum_probs=84.6
Q ss_pred CCCCEEEEEcCCCe-eeEEeecccc--cccccceEEEEECC--CCc-EEE-EE---cCCeEEEEEcCCCCccceeeeeee
Q 022019 146 RDHPIHLWDATTGL-LRCTYRAYDA--VDEITAAFSVAFNP--TGT-KIF-AG---YNKSVRVFDVHRPGRDFEKYSTLK 215 (304)
Q Consensus 146 ~dg~i~i~d~~~~~-~~~~~~~~~~--~~~~~~v~~i~~~~--~~~-~l~-~~---~d~~i~v~d~~~~~~~~~~~~~~~ 215 (304)
.+|.|.++|+.+.. ....+..... .........+.+.+ ++. +|+ +. .+..|.+|++...+..........
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 68999999987421 1222332210 01122456777755 443 344 43 367899999876544433333332
Q ss_pred ccccccccceeEEEeecCCCcEEEEEe-----------------cCCeEEEEecCCceEeEEeccccCCeEEEEECCCCc
Q 022019 216 GNKEGQAGIMSAIAFSPTHTGMLAIGS-----------------YSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGN 278 (304)
Q Consensus 216 ~~~~~~~~~v~~~~~~p~~~~~l~~~~-----------------~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~ 278 (304)
. ..-.....+.+.+ ++.++++.. ..|.|.-+|.. +.. .+...-..-+.++|+||++
T Consensus 161 g---~~~~~pND~~v~~-~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~-~~~~~l~~pNGia~spDg~ 233 (355)
T 3sre_A 161 H---KLLPSVNDIVAVG-PEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVR-VVAEGFDFANGINISPDGK 233 (355)
T ss_dssp C---TTCSSEEEEEEEE-TTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCE-EEEEEESSEEEEEECTTSS
T ss_pred c---CCCCCCceEEEeC-CCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEE-EeecCCcccCcceECCCCC
Confidence 2 1233478899999 666666654 12455555553 222 2222233468999999999
Q ss_pred EEEEeeccCCeEEEEeccc
Q 022019 279 YLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 279 ~l~~~~~~d~~i~vwd~~~ 297 (304)
+|+.+....+.|..|++..
T Consensus 234 ~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 234 YVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp EEEEEEGGGTEEEEEEECT
T ss_pred EEEEEeCCCCeEEEEEECC
Confidence 8887765788999999863
No 292
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.07 E-value=0.0011 Score=57.17 Aligned_cols=57 Identities=12% Similarity=0.181 Sum_probs=40.5
Q ss_pred CCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEecccceeee
Q 022019 244 SQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVV 302 (304)
Q Consensus 244 dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~~ 302 (304)
+|.|..||+.+++.+-+..... ++..-.....+..++.++ .||.++.||.++|+.+-
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~-~dg~l~A~D~~tG~~lW 521 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGT-GDGYFKAFDAKSGKELW 521 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEEC-TTSEEEEEETTTCCEEE
T ss_pred cceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEEC-CCCcEEEEECCCCCEEE
Confidence 5789999999998877665322 222111122466788888 99999999999998763
No 293
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.07 E-value=9.7e-05 Score=63.60 Aligned_cols=135 Identities=16% Similarity=0.154 Sum_probs=80.4
Q ss_pred cEEEEEeCCCCEEEEEcCCCeeeEEeecccccc--------ccc--------------------------------ceEE
Q 022019 139 CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVD--------EIT--------------------------------AAFS 178 (304)
Q Consensus 139 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~--------~~~--------------------------------~v~~ 178 (304)
..++.++.+|.++++|..+|+.+.......... ... .-..
T Consensus 337 ~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~ 416 (582)
T 1flg_A 337 KATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNP 416 (582)
T ss_dssp EEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSC
T ss_pred EEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCC
Confidence 368888999999999999998876665432000 000 0014
Q ss_pred EEECCCCcEEEEE-c---------------------------------CCeEEEEEcCCCCccceeeeeeeccccccccc
Q 022019 179 VAFNPTGTKIFAG-Y---------------------------------NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGI 224 (304)
Q Consensus 179 i~~~~~~~~l~~~-~---------------------------------d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~ 224 (304)
++++|+...+++. . +|.|.-||+.++....+ ..... +
T Consensus 417 ~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~----~~~~~-----~ 487 (582)
T 1flg_A 417 MAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWE----HKEHL-----P 487 (582)
T ss_dssp CEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEE----EEESS-----C
T ss_pred ceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEE----ecCCC-----C
Confidence 5777765555432 1 46788888877532222 11110 1
Q ss_pred eeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCe-EEEEECCCCc-EEEEe
Q 022019 225 MSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGV-THVQFSRDGN-YLYTG 283 (304)
Q Consensus 225 v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v-~~~~~~~~~~-~l~~~ 283 (304)
+..-.... .+.++++|+.||.++.||.++++.+.+++...+.. .-+.|..+|+ |+++.
T Consensus 488 ~~~g~~~t-agglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~~~ 547 (582)
T 1flg_A 488 LWAGVLAT-AGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGVT 547 (582)
T ss_dssp CCSCCEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred CcccceEe-CCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEEEEEE
Confidence 11111112 23477779999999999999999998887543221 2256667886 44433
No 294
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.06 E-value=0.0016 Score=56.52 Aligned_cols=203 Identities=9% Similarity=0.033 Sum_probs=113.9
Q ss_pred CCceeEEEEcCCCCeEE-EecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCC-
Q 022019 60 NNFLKGIKWSPDGSSFL-TSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPT- 137 (304)
Q Consensus 60 ~~~V~~i~~s~~~~~l~-s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~- 137 (304)
-+.+..|+|++.+..|+ +-...+.|..+++...... . .....+ ...|..+++++.
T Consensus 39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~----------------~-~v~~~~------~~~P~GlAvD~~~ 95 (619)
T 3s94_A 39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESV----------------Q-NVVVSG------LLSPDGLACDWLG 95 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----C----------------E-EEECSS------CSCEEEEEEETTT
T ss_pred CCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCce----------------E-EEEeCC------CCCcCeEEEEecC
Confidence 44578999998655554 4445678888887633110 0 011110 012444455664
Q ss_pred ccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE--cCCeEEEEEcCCCCccceeeeee
Q 022019 138 SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG--YNKSVRVFDVHRPGRDFEKYSTL 214 (304)
Q Consensus 138 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~--~d~~i~v~d~~~~~~~~~~~~~~ 214 (304)
++++++-...+.|.+.++............. .....|+++|.+..|+ +. ..+.|...++... .... +
T Consensus 96 ~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l-----~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~--~~~~---l 165 (619)
T 3s94_A 96 EKLYWTDSETNRIEVSNLDGSLRKVLFWQEL-----DQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS--SRFI---I 165 (619)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECSSC-----SCCCCEEEETTTTEEEEEECSSSCEEEEEETTSC--SCEE---E
T ss_pred CEEEEEeCCCCEEEEEECCCCCEEEEEeCCC-----CCCceEEEecCCCeEEEeccCCCCEEEEEECCCC--ceEE---E
Confidence 4455555667889999987543322221111 1566899999766665 44 2467777776532 1111 1
Q ss_pred eccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEe
Q 022019 215 KGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWD 294 (304)
Q Consensus 215 ~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd 294 (304)
. .........++++++++.++++-...+.|..+|+..........+......++++..+ .|+.+....+.|...|
T Consensus 166 ~---~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~--~ly~td~~~~~V~~~d 240 (619)
T 3s94_A 166 I---NSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED--ILYWTDWSTHSILACN 240 (619)
T ss_dssp E---CSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS--EEEEECTTTCSEEEEE
T ss_pred E---eCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC--EEEEecCCCCEEEEEE
Confidence 1 1122346889999966777777777788999998765443333222222356777655 5555554778899999
Q ss_pred ccccee
Q 022019 295 LRKAVQ 300 (304)
Q Consensus 295 ~~~~~~ 300 (304)
..+++.
T Consensus 241 ~~tg~~ 246 (619)
T 3s94_A 241 KYTGEG 246 (619)
T ss_dssp SSSCCC
T ss_pred CCCCcc
Confidence 877753
No 295
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.05 E-value=0.00097 Score=52.76 Aligned_cols=152 Identities=9% Similarity=0.118 Sum_probs=95.0
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECC----CCc---EEEEE--c--CCeEEEEEcCC
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNP----TGT---KIFAG--Y--NKSVRVFDVHR 203 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~----~~~---~l~~~--~--d~~i~v~d~~~ 203 (304)
+|...+++.....+-+.+||+ +|+.+..+.. . .++.+..-| .|+ +++++ . +++|.+|++..
T Consensus 37 dp~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~-g------~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp 108 (355)
T 3amr_A 37 TPQNSKLITTNKKSGLVVYSL-DGKMLHSYNT-G------KLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDG 108 (355)
T ss_dssp CGGGCEEEEEETTTEEEEEET-TSCEEEEECC-S------CEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECT
T ss_pred CCCccEEEEEcCCCCEEEEcC-CCcEEEEccC-C------CcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECC
Confidence 445556777777788999999 7888877754 2 344444444 222 23344 4 68999998853
Q ss_pred CCccceeeeeeeccccccccceeEEEe--ecCCC-cEEEEEecCCeEEEEecC-------CceEeEEeccccCCeEEEEE
Q 022019 204 PGRDFEKYSTLKGNKEGQAGIMSAIAF--SPTHT-GMLAIGSYSQTSAIYRED-------NMELLYVLHGQEGGVTHVQF 273 (304)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~v~~~~~--~p~~~-~~l~~~~~dg~i~i~d~~-------~~~~~~~~~~~~~~v~~~~~ 273 (304)
....+..+.............+..+++ +|..+ .++++...+|.+..|++. +.+.+.+|.. .+.+-.+..
T Consensus 109 ~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~Egcvv 187 (355)
T 3amr_A 109 KNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAA 187 (355)
T ss_dssp TTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEE
T ss_pred CCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEE
Confidence 222222221100000011144667777 77444 468888889999999883 3466777774 456889999
Q ss_pred CCCCcEEEEeeccCCeEEEEecc
Q 022019 274 SRDGNYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 274 ~~~~~~l~~~~~~d~~i~vwd~~ 296 (304)
.+...+|+.+- .+.-|..++.+
T Consensus 188 Dd~~g~Lyv~e-Ed~GIw~~da~ 209 (355)
T 3amr_A 188 DDEYGRLYIAE-EDEAIWKFSAE 209 (355)
T ss_dssp ETTTTEEEEEE-TTTEEEEEECS
T ss_pred cCCCCeEEEec-ccceEEEEeCC
Confidence 99888999998 77555555543
No 296
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.01 E-value=0.0052 Score=53.38 Aligned_cols=157 Identities=13% Similarity=0.023 Sum_probs=99.2
Q ss_pred eEEEEeecCccceeCCC-ccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-cCCeEE
Q 022019 121 SVYDFCWFPHMSASDPT-SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVR 197 (304)
Q Consensus 121 ~v~~~~~~~~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~ 197 (304)
....+.| ++. +.++++-..++.|+.+++........+.... .....+++++.+..|+ +- ..+.|.
T Consensus 38 ~~~~l~~-------d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~-----~~P~GlAvD~~~~~LY~tD~~~~~I~ 105 (628)
T 4a0p_A 38 EASALDF-------DVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGL-----DYPEGMAVDWLGKNLYWADTGTNRIE 105 (628)
T ss_dssp CEEEEEE-------ETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSC-----SCCCEEEEETTTTEEEEEETTTTEEE
T ss_pred ceEEEEE-------ECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCC-----CCcceEEEEeCCCEEEEEECCCCEEE
Confidence 4455655 443 4455555667889999887554333332211 1456899998776666 44 678899
Q ss_pred EEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEE-ecCCeEEEEecCCceEeEEeccccCCeEEEEECCC
Q 022019 198 VFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIG-SYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRD 276 (304)
Q Consensus 198 v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~ 276 (304)
+.++..... ..+. .........++++|..+.++++- +..+.|...++........+. .-.....++++++
T Consensus 106 v~~~dG~~~-----~~l~---~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~-~~~~P~GlalD~~ 176 (628)
T 4a0p_A 106 VSKLDGQHR-----QVLV---WKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYA 176 (628)
T ss_dssp EEETTSTTC-----EEEE---CSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC-SCSSEEEEEEETT
T ss_pred EEecCCCcE-----EEEE---eCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEEC-CCCCcceEEEccc
Confidence 999864321 1111 11223468999999666665554 235788888876543332233 3456789999998
Q ss_pred CcEEEEeeccCCeEEEEecccc
Q 022019 277 GNYLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 277 ~~~l~~~~~~d~~i~vwd~~~~ 298 (304)
+..|+.+....+.|...++...
T Consensus 177 ~~~LY~aD~~~~~I~~~d~dG~ 198 (628)
T 4a0p_A 177 KRRLYWTDLDTNLIESSNMLGL 198 (628)
T ss_dssp TTEEEEEETTTTEEEEEETTSC
T ss_pred cCEEEEEECCCCEEEEEcCCCC
Confidence 8888877657788999998653
No 297
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.97 E-value=0.0071 Score=52.56 Aligned_cols=198 Identities=10% Similarity=0.037 Sum_probs=118.1
Q ss_pred CceeEEEEcCCCCe-EEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCC-c
Q 022019 61 NFLKGIKWSPDGSS-FLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPT-S 138 (304)
Q Consensus 61 ~~V~~i~~s~~~~~-l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~ 138 (304)
..+..|+|++.+.. +++-..++.|..++++..... .....+ ...|..+++++. +
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~------------------~v~~~g------~~~P~GlAvD~~~~ 92 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALE------------------HVVEFG------LDYPEGMAVDWLGK 92 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE------------------EEECSS------CSCCCEEEEETTTT
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcE------------------EEEeCC------CCCcceEEEEeCCC
Confidence 45789999985554 455556788988887643211 000000 013444455544 4
Q ss_pred cEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE--cCCeEEEEEcCCCCccceeeeeee
Q 022019 139 CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG--YNKSVRVFDVHRPGRDFEKYSTLK 215 (304)
Q Consensus 139 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~--~d~~i~v~d~~~~~~~~~~~~~~~ 215 (304)
+++++-...+.|.+.++............ ......|+++|....|+ +- ..+.|...++.... .. .+.
T Consensus 93 ~LY~tD~~~~~I~v~~~dG~~~~~l~~~~-----l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~--~~---~l~ 162 (628)
T 4a0p_A 93 NLYWADTGTNRIEVSKLDGQHRQVLVWKD-----LDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE--RT---TLV 162 (628)
T ss_dssp EEEEEETTTTEEEEEETTSTTCEEEECSS-----CCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS--CE---EEE
T ss_pred EEEEEECCCCEEEEEecCCCcEEEEEeCC-----CCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc--eE---EEE
Confidence 45555556778999998754322222111 12567999999655666 43 35678888876422 11 111
Q ss_pred ccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEec
Q 022019 216 GNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDL 295 (304)
Q Consensus 216 ~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~ 295 (304)
. .......++++++++.++++-...+.|..+|+..... ..+...-.....+++.. ..|+.+....+.|...|.
T Consensus 163 ~----~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~--~~ly~tD~~~~~I~~~dk 235 (628)
T 4a0p_A 163 P----NVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ--DYIYWTDWSRRSIERANK 235 (628)
T ss_dssp C----SCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET--TEEEEEETTTTEEEEEET
T ss_pred C----CCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC--CEEEEecCCCCEEEEEEC
Confidence 1 2234789999996677777777788999999865433 23332333456777754 355555536888999987
Q ss_pred ccce
Q 022019 296 RKAV 299 (304)
Q Consensus 296 ~~~~ 299 (304)
.+|+
T Consensus 236 ~tg~ 239 (628)
T 4a0p_A 236 TSGQ 239 (628)
T ss_dssp TTCC
T ss_pred CCCC
Confidence 6664
No 298
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.97 E-value=0.0089 Score=53.55 Aligned_cols=211 Identities=9% Similarity=0.022 Sum_probs=120.4
Q ss_pred CCCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCc
Q 022019 59 PNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS 138 (304)
Q Consensus 59 h~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 138 (304)
....|.++...++|. |..|+.++-|..++........-...... .... ......|.++.. +++|
T Consensus 311 ~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~--~~~~------~l~~~~v~~i~~-------d~~g 374 (781)
T 3v9f_A 311 SNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQ--MNES------SLSNKVVSSVCD-------DGQG 374 (781)
T ss_dssp SSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----C--CCSS------CCSSSCEEEEEE-------CTTS
T ss_pred CCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccc--cccC------CCCCcceEEEEE-------cCCC
Confidence 356799999998886 44566667788888765433111000000 0000 001244666654 4455
Q ss_pred cEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccceeeeeeeccc
Q 022019 139 CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNK 218 (304)
Q Consensus 139 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~ 218 (304)
. |..|+.++-|..||..++.... +.... ......|.++..++++.+.++..++.+..+|..+. .+ ......
T Consensus 375 ~-lWigt~~~Gl~~~~~~~~~~~~-~~~~~-~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~--~~---~~~~~~- 445 (781)
T 3v9f_A 375 K-LWIGTDGGGINVFENGKRVAIY-NKENR-ELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLK--KF---QIIELE- 445 (781)
T ss_dssp C-EEEEEBSSCEEEEETTEEEEEC-C------CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSC--EE---EECCST-
T ss_pred C-EEEEeCCCcEEEEECCCCeEEE-ccCCC-CCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCC--cE---EEeccC-
Confidence 5 4456655569999976543322 11110 11223789999998888777666678999987652 11 111110
Q ss_pred cccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccc-----cCCeEEEEECCCCcEEEEeeccCCeEEEE
Q 022019 219 EGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQ-----EGGVTHVQFSRDGNYLYTGGRKDPYILCW 293 (304)
Q Consensus 219 ~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~~d~~i~vw 293 (304)
......|.++...+ ++. |..|+. +-|..||..+++........ ...|.++...++|...+... .+| |..|
T Consensus 446 ~~~~~~v~~i~~d~-~g~-lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~~G-l~~~ 520 (781)
T 3v9f_A 446 KNELLDVRVFYEDK-NKK-IWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTF-GGG-VGIY 520 (781)
T ss_dssp TTCCCCEEEEEECT-TSE-EEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEES-SSC-EEEE
T ss_pred CCCCCeEEEEEECC-CCC-EEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEc-CCC-EEEE
Confidence 11234588888887 454 555666 56889998765433222211 35799999999998655433 244 7778
Q ss_pred ecccce
Q 022019 294 DLRKAV 299 (304)
Q Consensus 294 d~~~~~ 299 (304)
|..+++
T Consensus 521 ~~~~~~ 526 (781)
T 3v9f_A 521 TPDMQL 526 (781)
T ss_dssp CTTCCE
T ss_pred eCCCCe
Confidence 876653
No 299
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.90 E-value=0.0031 Score=54.43 Aligned_cols=157 Identities=15% Similarity=0.112 Sum_probs=91.1
Q ss_pred EEEEeCCCCEEEEEcCCCeeeEEeecccccccccceE-EEEECCCCcEEEEE------cCCeEEEEEcCCCCccceeeee
Q 022019 141 FASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAF-SVAFNPTGTKIFAG------YNKSVRVFDVHRPGRDFEKYST 213 (304)
Q Consensus 141 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~-~i~~~~~~~~l~~~------~d~~i~v~d~~~~~~~~~~~~~ 213 (304)
+++++.|+.|..+|..+|+.+.......... ...+. ...+ .++..++.+ .++.|+-+|.+++....+....
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~-~~~~~ssP~v-~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~ 201 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKV-GSTLTIAPYV-VKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYAT 201 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGG-TCBCCSCCEE-ETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCc-cceeecCCEE-ECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCC
Confidence 7778889999999999999887665432100 00111 1111 145444432 2789999999886433221111
Q ss_pred eeccc------------------------------cccccceeEEEeecCCCcEEEEEecC----------------CeE
Q 022019 214 LKGNK------------------------------EGQAGIMSAIAFSPTHTGMLAIGSYS----------------QTS 247 (304)
Q Consensus 214 ~~~~~------------------------------~~~~~~v~~~~~~p~~~~~l~~~~~d----------------g~i 247 (304)
..... .+....-..+++.+ ...+++.++.+ +.|
T Consensus 202 ~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~-~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv 280 (599)
T 1w6s_A 202 GPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDP-GTNLIYFGTGNPAPWNETMRPGDNKWTMTI 280 (599)
T ss_dssp SCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEET-TTTEEEEECCCCSCSCGGGSCSCCTTSSEE
T ss_pred CCccccccccccccccccccccccccccCCCcceecCCCccccceeEeC-CCCEEEEeCCCCccccCcccCCCccccceE
Confidence 00000 00000012356667 44466666655 379
Q ss_pred EEEecCCceEeEEeccccC----------CeEEEEEC-CCC---cEEEEeeccCCeEEEEecccceeee
Q 022019 248 AIYREDNMELLYVLHGQEG----------GVTHVQFS-RDG---NYLYTGGRKDPYILCWDLRKAVQVV 302 (304)
Q Consensus 248 ~i~d~~~~~~~~~~~~~~~----------~v~~~~~~-~~~---~~l~~~~~~d~~i~vwd~~~~~~~~ 302 (304)
.-+|.++++.+-.+..... ++. +... .+| ..++.++ .+|.++++|.++|+.+.
T Consensus 281 ~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~-~~G~l~~lD~~tG~~lw 347 (599)
T 1w6s_A 281 FGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPD-RNGIVYTLDRTDGALVS 347 (599)
T ss_dssp EEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEEC-TTSEEEEEETTTCCEEE
T ss_pred EEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEEC-CCcEEEEEECCCCCEee
Confidence 9999999998877763211 121 2222 567 5677787 89999999999998763
No 300
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.87 E-value=5e-05 Score=66.83 Aligned_cols=155 Identities=14% Similarity=-0.002 Sum_probs=89.2
Q ss_pred ccceeCCCccEEEEE-eCCCCEEEEEcCC----CeeeEEeecccccccccceEEEEECCCCcEEE-EE-cCCeEEEEEcC
Q 022019 130 HMSASDPTSCVFAST-TRDHPIHLWDATT----GLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVH 202 (304)
Q Consensus 130 ~~~~~~~~~~~l~~~-~~dg~i~i~d~~~----~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~v~d~~ 202 (304)
..+++++.+..|+.+ ...+.|+.+++.. ......+... ......|++++.+..|+ +- ..+.|.++++.
T Consensus 409 ~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~-----~~~P~glavD~~~g~LY~tD~~~~~I~v~d~d 483 (699)
T 1n7d_A 409 VALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD-----IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 483 (699)
T ss_dssp CCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSC-----C--CCCEECCCSSSBCEECCTTTSCEEEEBSS
T ss_pred EEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCC-----CCCcceEEEEeeCCcEEEEeccCCeEEEEecC
Confidence 344556655444444 4567899999875 1111111110 11345788887555555 43 67889999986
Q ss_pred CCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecC-CeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEE
Q 022019 203 RPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS-QTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLY 281 (304)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d-g~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 281 (304)
... . ..+. .........++++|.++.++++-... +.|..+++........+...-.....|+|+|++..|+
T Consensus 484 g~~--~---~~l~---~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY 555 (699)
T 1n7d_A 484 GVK--R---KTLF---REQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLY 555 (699)
T ss_dssp SCC--E---EEEC---CCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEE
T ss_pred CCc--e---EEEE---eCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEE
Confidence 421 1 1111 11122357889999666666554333 7888888754322222222223457899999877776
Q ss_pred EeeccCCeEEEEeccc
Q 022019 282 TGGRKDPYILCWDLRK 297 (304)
Q Consensus 282 ~~~~~d~~i~vwd~~~ 297 (304)
.+....+.|.++++..
T Consensus 556 ~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 556 WVDSKLHSISSIDVNG 571 (699)
T ss_dssp EEETTTTEEEEECSSS
T ss_pred EEecCCCeEEEEccCC
Confidence 6654678899999864
No 301
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.82 E-value=0.00094 Score=58.52 Aligned_cols=193 Identities=10% Similarity=0.028 Sum_probs=96.7
Q ss_pred EEEEcCCCCeEEEec-CC-----CeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCc
Q 022019 65 GIKWSPDGSSFLTSS-ED-----KTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS 138 (304)
Q Consensus 65 ~i~~s~~~~~l~s~~-~d-----g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 138 (304)
+++..++|+.++.|+ .+ ..+.+||..++.......... .+.... . ....+..++
T Consensus 291 s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~-----------------~p~~~~-~--~~~~~~~~~ 350 (656)
T 1k3i_A 291 SSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKV-----------------NPMLTA-D--KQGLYRSDN 350 (656)
T ss_dssp EEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCS-----------------GGGCCC-C--TTGGGTTTC
T ss_pred ceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccc-----------------cccccc-c--ccceeecCC
Confidence 345557888888888 34 468889887654321100000 000000 0 001112344
Q ss_pred cEEEEEeCCC---------CEEEEEcCCCeeeEEeecccc----cccccceEEEEECC-CCcEEEEE-cCC---------
Q 022019 139 CVFASTTRDH---------PIHLWDATTGLLRCTYRAYDA----VDEITAAFSVAFNP-TGTKIFAG-YNK--------- 194 (304)
Q Consensus 139 ~~l~~~~~dg---------~i~i~d~~~~~~~~~~~~~~~----~~~~~~v~~i~~~~-~~~~l~~~-~d~--------- 194 (304)
..++.++.+| .+..||..+............ ......-.++.|.. ++++++.| .++
T Consensus 351 ~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~ 430 (656)
T 1k3i_A 351 HAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTN 430 (656)
T ss_dssp SCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCC
T ss_pred ceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCc
Confidence 4555554443 467888877654332221110 00001223455544 56666654 332
Q ss_pred --eEEEEEcCCCCccceeeeeee-ccccccccceeEEEeecCCCcEEEEEecC-----------CeEEEEecCCceE--e
Q 022019 195 --SVRVFDVHRPGRDFEKYSTLK-GNKEGQAGIMSAIAFSPTHTGMLAIGSYS-----------QTSAIYREDNMEL--L 258 (304)
Q Consensus 195 --~i~v~d~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~p~~~~~l~~~~~d-----------g~i~i~d~~~~~~--~ 258 (304)
.|.+||..+. .. .... .... ....-.+++..| ++.+++.|+.+ ..+.+||..+.+- +
T Consensus 431 ~~~v~~yd~~~~--~W---~~~~~~~mp-~~R~~~~~~~l~-~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~ 503 (656)
T 1k3i_A 431 AHIITLGEPGTS--PN---TVFASNGLY-FARTFHTSVVLP-DGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQ 503 (656)
T ss_dssp EEEEECCSTTSC--CE---EEECTTCCS-SCCBSCEEEECT-TSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEEC
T ss_pred ceEEEcCCCCCC--Ce---eEEccCCCC-CCcccCCeEECC-CCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeec
Confidence 5777877652 11 1111 0111 111123445667 67788888764 4689999877552 2
Q ss_pred EEeccccCCeEEEEECCCCcEEEEee
Q 022019 259 YVLHGQEGGVTHVQFSRDGNYLYTGG 284 (304)
Q Consensus 259 ~~~~~~~~~v~~~~~~~~~~~l~~~~ 284 (304)
..+...........+.|+|+.++.||
T Consensus 504 ~~~~~~R~~hs~a~ll~dg~v~v~GG 529 (656)
T 1k3i_A 504 NPNSIVRVYHSISLLLPDGRVFNGGG 529 (656)
T ss_dssp CCCSSCCCTTEEEEECTTSCEEEEEC
T ss_pred CCCCCccccccHhhcCCCcEEEecCC
Confidence 22222223334566789999999988
No 302
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.78 E-value=0.014 Score=50.67 Aligned_cols=152 Identities=13% Similarity=0.036 Sum_probs=90.3
Q ss_pred CCCc-cEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-cCCeEEEEEcCCCCccceee
Q 022019 135 DPTS-CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGRDFEKY 211 (304)
Q Consensus 135 ~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~v~d~~~~~~~~~~~ 211 (304)
++.+ .++++=...+.|..+++........+.... ......+++++.+..|+ +. ..+.|.+.++.....
T Consensus 48 ~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~----~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~----- 118 (619)
T 3s94_A 48 VFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSG----LLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR----- 118 (619)
T ss_dssp ETTTTEEEEEETTTTEEEEEEC-----CEEEECSS----CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-----
T ss_pred EeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCC----CCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCE-----
Confidence 4444 444444456778888876543211221111 11677999999776666 54 778999999875211
Q ss_pred eeeeccccccccceeEEEeecCCCcEEEEEe-cCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeE
Q 022019 212 STLKGNKEGQAGIMSAIAFSPTHTGMLAIGS-YSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYI 290 (304)
Q Consensus 212 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i 290 (304)
..+. .........++++|.++.++++-- ..+.|...++............-.....+++++++..|+.+....+.|
T Consensus 119 ~~l~---~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I 195 (619)
T 3s94_A 119 KVLF---WQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFI 195 (619)
T ss_dssp EEEE---CSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCE
T ss_pred EEEE---eCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeE
Confidence 1111 112233678999996666666542 246787777754333222322334678999999887887776567889
Q ss_pred EEEecccc
Q 022019 291 LCWDLRKA 298 (304)
Q Consensus 291 ~vwd~~~~ 298 (304)
...++...
T Consensus 196 ~~~~~dG~ 203 (619)
T 3s94_A 196 HKSNLDGT 203 (619)
T ss_dssp EEESSSCC
T ss_pred EEecCCCC
Confidence 99888653
No 303
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.74 E-value=0.0097 Score=49.50 Aligned_cols=111 Identities=13% Similarity=0.207 Sum_probs=57.0
Q ss_pred cceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeeccccc---ccccceEEEEECCC---CcEEEEE-c-----------
Q 022019 131 MSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAV---DEITAAFSVAFNPT---GTKIFAG-Y----------- 192 (304)
Q Consensus 131 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~---~~~~~v~~i~~~~~---~~~l~~~-~----------- 192 (304)
.+++.|+|+++++-...+.|++++..++............ .....+..|+|+|+ +..|+++ .
T Consensus 31 ~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~ 110 (454)
T 1cru_A 31 ALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDKEL 110 (454)
T ss_dssp EEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--CCS
T ss_pred EEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCcccc
Confidence 3455889987776544456888876555543322222111 12236779999996 5555533 2
Q ss_pred --CCeEEEEEcCCCCccceeeeeeec-cccccccceeEEEeecCCCcEEEEEe
Q 022019 193 --NKSVRVFDVHRPGRDFEKYSTLKG-NKEGQAGIMSAIAFSPTHTGMLAIGS 242 (304)
Q Consensus 193 --d~~i~v~d~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~p~~~~~l~~~~ 242 (304)
...|.-|+.............+.. ...........|+|.| ++.++++.+
T Consensus 111 ~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~p-DG~Lyv~~G 162 (454)
T 1cru_A 111 PNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGP-DQKIYYTIG 162 (454)
T ss_dssp CEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECT-TSCEEEEEC
T ss_pred ccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECC-CCeEEEEEC
Confidence 235666665432211111111111 1111122367899999 555555543
No 304
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.56 E-value=0.018 Score=45.03 Aligned_cols=197 Identities=15% Similarity=0.195 Sum_probs=121.9
Q ss_pred EEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeC
Q 022019 67 KWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTR 146 (304)
Q Consensus 67 ~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~ 146 (304)
-.+|..+.+|.-. ..++.|+|+++..... ...-...|.-..|. + .+.|+..+
T Consensus 73 IMnP~~~ViALra-g~~LQiFnletK~klk------------------s~~~~e~VvfWkWi------s--~~~L~lVT- 124 (365)
T 2xzh_A 73 IMNPASKVIALKA-GKTLQIFNIEMKSKMK------------------AHTMTDDVTFWKWI------S--LNTVALVT- 124 (365)
T ss_dssp EECSSSSEEEEEE-TTEEEEEETTTTEEEE------------------EEECSSCEEEEEEC------S--SSEEEEEE-
T ss_pred eeCCCccEEEEec-CCeEEEechHHhhhhc------------------ceecCCccEEEEec------C--CCeEEEEc-
Confidence 3467766666544 5689999998653321 11223577777773 2 22454444
Q ss_pred CCCEEEEEcCC-CeeeEEeecccccccccceEEEEECCCCcEEE-EE---cC----CeEEEEEcCCCCccceeeeeeecc
Q 022019 147 DHPIHLWDATT-GLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG---YN----KSVRVFDVHRPGRDFEKYSTLKGN 217 (304)
Q Consensus 147 dg~i~i~d~~~-~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~---~d----~~i~v~d~~~~~~~~~~~~~~~~~ 217 (304)
+..|+-|++.. ..+...+..+.... ...|..-..+++.+.++ +| .+ |.+.+|..+.. ....
T Consensus 125 ~taVyHWs~~~~s~P~kvFdR~~~L~-~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~---------~sQ~ 194 (365)
T 2xzh_A 125 DNAVYHWSMEGESQPVKMFDRHSSLA-GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK---------VSQP 194 (365)
T ss_dssp SSEEEEEESSTTCCCEEEEECCGGGT-TCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT---------EEEE
T ss_pred CCcEEEEcccCCCCCceeeecchhcc-cceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc---------ccce
Confidence 45699999975 34556666655543 34788888899999888 44 23 67889988752 1122
Q ss_pred ccccccceeEEEeec--CCCcEEEEEecC---CeEEEEecCCc---eE------eEEec---cccCCeEEEEECCCCcEE
Q 022019 218 KEGQAGIMSAIAFSP--THTGMLAIGSYS---QTSAIYREDNM---EL------LYVLH---GQEGGVTHVQFSRDGNYL 280 (304)
Q Consensus 218 ~~~~~~~v~~~~~~p--~~~~~l~~~~~d---g~i~i~d~~~~---~~------~~~~~---~~~~~v~~~~~~~~~~~l 280 (304)
.++|.+....+.+.. ....+++.+... +.++|.++... .+ +..+- ...+--.++..++.-..+
T Consensus 195 ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygvi 274 (365)
T 2xzh_A 195 IEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVV 274 (365)
T ss_dssp ECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEE
T ss_pred eeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEE
Confidence 266665544444332 112344444432 58999988432 11 11111 113345678888888888
Q ss_pred EEeeccCCeEEEEecccceeee
Q 022019 281 YTGGRKDPYILCWDLRKAVQVV 302 (304)
Q Consensus 281 ~~~~~~d~~i~vwd~~~~~~~~ 302 (304)
+... .-|.|++||+.++.++.
T Consensus 275 yviT-K~G~ihlyDleTgt~i~ 295 (365)
T 2xzh_A 275 FLIT-KYGYIHLYDLETGTCIY 295 (365)
T ss_dssp EEEE-TTSEEEEEETTTCCEEE
T ss_pred EEEe-CCcEEEEEEcccCcEEE
Confidence 8888 99999999999998875
No 305
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.54 E-value=0.0052 Score=49.36 Aligned_cols=148 Identities=14% Similarity=0.117 Sum_probs=75.4
Q ss_pred CccceeCCCccEEEEEeCCCCEEEEEcCCCe-eeEEeecccccccccceEEEEECCC---CcEEEEE-c----C----Ce
Q 022019 129 PHMSASDPTSCVFASTTRDHPIHLWDATTGL-LRCTYRAYDAVDEITAAFSVAFNPT---GTKIFAG-Y----N----KS 195 (304)
Q Consensus 129 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~~~~~v~~i~~~~~---~~~l~~~-~----d----~~ 195 (304)
|..+++.|+|++++ +..+|.|++++ .+++ ....+.... ........|+++|+ +..|+++ . + +.
T Consensus 31 P~~ia~~pdG~l~V-~e~~g~I~~~d-~~G~~~~~~~~v~~--~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 31 PWSIAPLGGGRYLV-TERPGRLVLIS-PSGKKLVASFDVAN--VGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp EEEEEEEETTEEEE-EETTTEEEEEC-SSCEEEEEECCCCC--STTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CeEEEEcCCCeEEE-EeCCCEEEEEe-CCCceEeeccceee--cCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 33445577888555 45669999887 4454 111111000 11226789999998 5555533 3 2 57
Q ss_pred EEEEEcCCCCccceeeeeeec-cccccccceeEEEeecCCCcEEEEEec-------------CCeEEEEecCCc------
Q 022019 196 VRVFDVHRPGRDFEKYSTLKG-NKEGQAGIMSAIAFSPTHTGMLAIGSY-------------SQTSAIYREDNM------ 255 (304)
Q Consensus 196 i~v~d~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~p~~~~~l~~~~~-------------dg~i~i~d~~~~------ 255 (304)
|..|+.............+.. ...........++|.| ++.++++.+. .|.|.-++....
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~p-DG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~np 185 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGP-DGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNP 185 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECT-TSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSS
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECC-CCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCC
Confidence 778887543111111111111 0011111246799999 5556665332 245666665421
Q ss_pred ---eEeEEeccccCCeEEEEECC-CCcEEEEe
Q 022019 256 ---ELLYVLHGQEGGVTHVQFSR-DGNYLYTG 283 (304)
Q Consensus 256 ---~~~~~~~~~~~~v~~~~~~~-~~~~l~~~ 283 (304)
..+. ..++.. ...++|+| +|...++-
T Consensus 186 f~~~~i~-a~G~rn-p~Gla~d~~~g~l~v~d 215 (354)
T 3a9g_A 186 FPNSPIW-SYGHRN-PQGIDWHRASGVMVATE 215 (354)
T ss_dssp STTCCEE-EECCSC-CCEEEECTTTCCEEEEE
T ss_pred CCCCcEE-EEccCC-cceEEEeCCCCCEEEEe
Confidence 0111 123433 46899999 56644443
No 306
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.51 E-value=0.0046 Score=49.64 Aligned_cols=107 Identities=15% Similarity=0.074 Sum_probs=56.5
Q ss_pred CccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCC---CcEEEEE--cC-----CeEEE
Q 022019 129 PHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPT---GTKIFAG--YN-----KSVRV 198 (304)
Q Consensus 129 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~---~~~l~~~--~d-----~~i~v 198 (304)
|..+++.|+|+++++ ..+|.|++++ +++........-..........|+|+|+ +..|+++ .. +.|..
T Consensus 33 P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r 109 (352)
T 2ism_A 33 PWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVR 109 (352)
T ss_dssp EEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEE
T ss_pred ceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEE
Confidence 444556889985554 5669999998 4543221111100011236789999998 5555533 22 67888
Q ss_pred EEcCCCCccceeeeeeecccc---ccccceeEEEeecCCCcEEEEE
Q 022019 199 FDVHRPGRDFEKYSTLKGNKE---GQAGIMSAIAFSPTHTGMLAIG 241 (304)
Q Consensus 199 ~d~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~p~~~~~l~~~ 241 (304)
|+.... .......+..... +.......++|.| ++.++++.
T Consensus 110 ~~~~~~--~~~~~~~l~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~ 152 (352)
T 2ism_A 110 LRHLGE--RGVLDRVVLDGIPARPHGLHSGGRIAFGP-DGMLYVTT 152 (352)
T ss_dssp EEECSS--CEEEEEEEEEEECCCTTCCCCCCCEEECT-TSCEEEEC
T ss_pred EEeCCC--CcCceEEEEEeCCCCCCCCcCCceEEECC-CCCEEEEE
Confidence 887632 1111111111011 1112246899999 55565553
No 307
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.42 E-value=0.008 Score=48.24 Aligned_cols=152 Identities=11% Similarity=0.075 Sum_probs=76.6
Q ss_pred cCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccc--cccccceEEEEECCC---CcEEEEE--c-------C
Q 022019 128 FPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDA--VDEITAAFSVAFNPT---GTKIFAG--Y-------N 193 (304)
Q Consensus 128 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~~~~~~v~~i~~~~~---~~~l~~~--~-------d 193 (304)
.|..+++.|+|+.|+++...|.|++++. .+.....+..... .........|+++|+ +..|+++ . .
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~-~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQA-GKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEET-TTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeC-CCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 3455566889983445556799999985 3432211111100 011225689999996 5555532 2 2
Q ss_pred CeEEEEEcCCCCccceeeeeeecccc---ccccceeEEEeecCCCcEEEEEec-------------CCeEEEEecCCce-
Q 022019 194 KSVRVFDVHRPGRDFEKYSTLKGNKE---GQAGIMSAIAFSPTHTGMLAIGSY-------------SQTSAIYREDNME- 256 (304)
Q Consensus 194 ~~i~v~d~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~p~~~~~l~~~~~-------------dg~i~i~d~~~~~- 256 (304)
..|..|++............+..... ........++|.| ++.++++.+. .|.|.-++....-
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p 176 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDG-KGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIP 176 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECS-SSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCC
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECC-CCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCC
Confidence 35777776543222222222211111 1111245799999 5655555433 2467667664320
Q ss_pred -----------EeEEe-ccccCCeEEEEECC-CCcEEEEe
Q 022019 257 -----------LLYVL-HGQEGGVTHVQFSR-DGNYLYTG 283 (304)
Q Consensus 257 -----------~~~~~-~~~~~~v~~~~~~~-~~~~l~~~ 283 (304)
....+ .++. ....++|+| +|. |+++
T Consensus 177 ~~npf~~~~~~~~~i~a~G~r-np~gl~~d~~~g~-l~~~ 214 (353)
T 2g8s_A 177 DDNPFIKESGVRAEIWSYGIR-NPQGMAMNPWSNA-LWLN 214 (353)
T ss_dssp TTCTTTTSTTSCTTEEEECCS-EEEEEEEETTTTE-EEEE
T ss_pred CCCCCcCCCCCCccEEEEcCc-CccceEEECCCCC-EEEE
Confidence 11111 2333 358899999 555 4443
No 308
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.24 E-value=0.045 Score=42.69 Aligned_cols=146 Identities=13% Similarity=0.120 Sum_probs=76.5
Q ss_pred CccEEEEEeCC------CCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-c---------CCeEEEEE
Q 022019 137 TSCVFASTTRD------HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-Y---------NKSVRVFD 200 (304)
Q Consensus 137 ~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~---------d~~i~v~d 200 (304)
++.+++.|+.+ ..+.+||+.+.+....-...... .....+.+ ++++++.| . -..+.+||
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r---~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd 175 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQR---CSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYD 175 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCC---BSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEE
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCc---ceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeC
Confidence 56677777654 45899999887654432221110 01122222 45555543 2 34588999
Q ss_pred cCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecC-----CeEEEEecCCce--EeEEeccccCCeEEEEE
Q 022019 201 VHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS-----QTSAIYREDNME--LLYVLHGQEGGVTHVQF 273 (304)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d-----g~i~i~d~~~~~--~~~~~~~~~~~v~~~~~ 273 (304)
+.+. ....+..+. . ..... +++.. ++.+++.|+.+ ..+.+||+.+.+ .+..+.........+.+
T Consensus 176 ~~~~--~W~~~~~~p---~-~r~~~-~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 246 (306)
T 3ii7_A 176 PATE--TWTELCPMI---E-ARKNH-GLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV 246 (306)
T ss_dssp TTTT--EEEEECCCS---S-CCBSC-EEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE
T ss_pred CCCC--eEEECCCcc---c-hhhcc-eEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE
Confidence 8763 222222111 1 11111 22222 45677777654 358999988754 33223222223334444
Q ss_pred CCCCcEEEEeeccC-----CeEEEEecccce
Q 022019 274 SRDGNYLYTGGRKD-----PYILCWDLRKAV 299 (304)
Q Consensus 274 ~~~~~~l~~~~~~d-----~~i~vwd~~~~~ 299 (304)
++..++.|| .+ ..+.+||+.+.+
T Consensus 247 --~~~i~v~GG-~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 247 --GSIVYVLAG-FQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp --TTEEEEEEC-BCSSSBCCEEEEEETTTTE
T ss_pred --CCEEEEEeC-cCCCeeeeeEEEEcCCCCe
Confidence 567777777 44 468889987754
No 309
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.22 E-value=0.025 Score=45.38 Aligned_cols=105 Identities=18% Similarity=0.255 Sum_probs=63.6
Q ss_pred ceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccceeeeeeeccccccccceeEEEeecC---CCcEEEEEecC-----Ce
Q 022019 175 AAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPT---HTGMLAIGSYS-----QT 246 (304)
Q Consensus 175 ~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~---~~~~l~~~~~d-----g~ 246 (304)
....++|.|+|+++++..++.|++++ .. . ...+..+. ...........++|+|+ ++.++++-+.+ +.
T Consensus 32 ~P~~ia~~pdG~l~V~e~~g~I~~i~-~g--~-~~~~~~~~-v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 32 VPWALAFLPDGGMLIAERPGRIRLFR-EG--R-LSTYAELS-VYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp CEEEEEECTTSCEEEEETTTEEEEEE-TT--E-EEEEEECC-CCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CceEEEEcCCCeEEEEeCCCeEEEEE-CC--C-ccEeecce-EeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 55799999999977777779999998 22 1 11111111 11122345789999995 35565555543 67
Q ss_pred EEEEecCCc-----eEe-EEec---cccCCeEEEEECCCCcEEEEee
Q 022019 247 SAIYREDNM-----ELL-YVLH---GQEGGVTHVQFSRDGNYLYTGG 284 (304)
Q Consensus 247 i~i~d~~~~-----~~~-~~~~---~~~~~v~~~~~~~~~~~l~~~~ 284 (304)
|..|+.... +.+ ..+. +.......++|.|||.+.++.+
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 888887643 122 2233 1112346899999997666544
No 310
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.22 E-value=0.047 Score=42.47 Aligned_cols=146 Identities=15% Similarity=0.192 Sum_probs=76.3
Q ss_pred CccEEEEEeCC-----CCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cC-----CeEEEEEcCCCC
Q 022019 137 TSCVFASTTRD-----HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YN-----KSVRVFDVHRPG 205 (304)
Q Consensus 137 ~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d-----~~i~v~d~~~~~ 205 (304)
++.+++.|+.+ ..+.+||+.+.+....-...... .....+.+ +++.++.| .+ ..+.+||+.+.
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r---~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~- 185 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAR---EGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTG- 185 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCC---BSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTT-
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCc---ccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCC-
Confidence 56677777654 35889998887654432222111 01122222 45555543 33 46889998762
Q ss_pred ccceeeeeeeccccccccceeEEEeecCCCcEEEEEecC-----CeEEEEecCCceE--eEEeccccCCeEEEEECCCCc
Q 022019 206 RDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS-----QTSAIYREDNMEL--LYVLHGQEGGVTHVQFSRDGN 278 (304)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d-----g~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~~~~~ 278 (304)
....+..+. . .......+. . ++.+++.|+.+ ..+.+||+.+.+- +..+.........+.+ +++
T Consensus 186 -~W~~~~~~p---~-~r~~~~~~~-~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~ 255 (301)
T 2vpj_A 186 -HWTNVTPMA---T-KRSGAGVAL-L--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGR 255 (301)
T ss_dssp -EEEEECCCS---S-CCBSCEEEE-E--TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTE
T ss_pred -cEEeCCCCC---c-ccccceEEE-E--CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCE
Confidence 222221111 1 111112222 2 45677888764 4689999987653 2222222222233333 577
Q ss_pred EEEEeeccC-----CeEEEEecccce
Q 022019 279 YLYTGGRKD-----PYILCWDLRKAV 299 (304)
Q Consensus 279 ~l~~~~~~d-----~~i~vwd~~~~~ 299 (304)
.++.|| .+ ..+.+||+++.+
T Consensus 256 i~v~GG-~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 256 LYAIAG-YDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp EEEECC-BCSSSBEEEEEEEETTTTE
T ss_pred EEEEcC-cCCCcccccEEEEcCCCCe
Confidence 777777 54 467888887654
No 311
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.18 E-value=0.06 Score=42.88 Aligned_cols=149 Identities=14% Similarity=0.101 Sum_probs=79.1
Q ss_pred CccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeeccc-ccccccceEEEEECCC---CcEEEEE----cCCeEEEEE
Q 022019 129 PHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYD-AVDEITAAFSVAFNPT---GTKIFAG----YNKSVRVFD 200 (304)
Q Consensus 129 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~~~~~~v~~i~~~~~---~~~l~~~----~d~~i~v~d 200 (304)
|..+++.|+|.++++--..|.|++++...++......... ..........|+++|+ +..|++. .++.|.-|.
T Consensus 34 P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~ 113 (347)
T 3das_A 34 PWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRML 113 (347)
T ss_dssp EEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEE
T ss_pred ceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEEE
Confidence 3344558899877766558999999866555432211110 0112236789999996 3444432 455666676
Q ss_pred cCCCC---cc---ceeee-eeeccccccccceeEEEeecCCCcEEEEEec-------------CCeEEEEecCCc-----
Q 022019 201 VHRPG---RD---FEKYS-TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSY-------------SQTSAIYREDNM----- 255 (304)
Q Consensus 201 ~~~~~---~~---~~~~~-~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~-------------dg~i~i~d~~~~----- 255 (304)
+.... .. .+.+. .+. ....| ....|.|.| ++.++++.+. .|.|.-++....
T Consensus 114 ~~~~~~~~~~~~~~~~i~~~~p-~~~~H--~g~~l~fgp-DG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~n 189 (347)
T 3das_A 114 YDEKKPSGEQLGAPDTVFRGIP-KGVIH--NGGRIAFGP-DKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGN 189 (347)
T ss_dssp BCTTSCTTCCBCCCEEEEEEEC-CCSSC--CCCCEEECT-TSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTC
T ss_pred eCCCCcccccCCCcEEEEEcCC-CCCCc--cCccccCCC-CCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCC
Confidence 65411 11 11111 111 11223 246799999 5556665432 355555555422
Q ss_pred ----eEeEEeccccCCeEEEEECCCCcEEEEe
Q 022019 256 ----ELLYVLHGQEGGVTHVQFSRDGNYLYTG 283 (304)
Q Consensus 256 ----~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 283 (304)
..+.. .+|.. ...++|+|+|.+.++=
T Consensus 190 Pf~~~~i~a-~G~RN-p~Gla~dp~G~L~~~d 219 (347)
T 3das_A 190 PFPGSPVYS-YGHRN-VQGLAWDDKQRLFASE 219 (347)
T ss_dssp SSTTCCEEE-BCCSB-CCEEEECTTCCEEEEE
T ss_pred CCCCCeEEe-eCCCC-cceEEECCCCCEEEEe
Confidence 11211 24544 4689999988755543
No 312
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.03 E-value=0.09 Score=42.14 Aligned_cols=213 Identities=11% Similarity=0.059 Sum_probs=102.8
Q ss_pred CCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCcc
Q 022019 60 NNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSC 139 (304)
Q Consensus 60 ~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 139 (304)
-.....|+|.|+|+++++ ..+|.|++++.. +. ..+.... +..........+++.|.+ ..++.
T Consensus 28 l~~P~~ia~~pdG~l~V~-e~~g~I~~~d~~-G~--~~~~~~~-----------v~~~g~~g~~gia~~pdf---~~~g~ 89 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLVT-ERPGRLVLISPS-GK--KLVASFD-----------VANVGEAGLLGLALHPEF---PKKSW 89 (354)
T ss_dssp CSCEEEEEEEETTEEEEE-ETTTEEEEECSS-CE--EEEEECC-----------CCCSTTCSEEEEEECTTT---TTSCE
T ss_pred CCCCeEEEEcCCCeEEEE-eCCCEEEEEeCC-Cc--eEeeccc-----------eeecCCCceeeEEeCCCC---CcCCE
Confidence 345789999999986555 556899988732 21 0000000 000111334556654321 11244
Q ss_pred EEEEEeC---C----CCEEEEEcCCC--ee---eEEee-cccccccccceEEEEECCCCcEEEEEcC-------------
Q 022019 140 VFASTTR---D----HPIHLWDATTG--LL---RCTYR-AYDAVDEITAAFSVAFNPTGTKIFAGYN------------- 193 (304)
Q Consensus 140 ~l~~~~~---d----g~i~i~d~~~~--~~---~~~~~-~~~~~~~~~~v~~i~~~~~~~~l~~~~d------------- 193 (304)
++++-+. + ..|..|+.... .. ...+. ......| ....|.|.|+|.++++..+
T Consensus 90 lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h--~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~ 167 (354)
T 3a9g_A 90 VYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIH--NGGRIRFGPDGMLYITTGDAADPRLAQDLSSL 167 (354)
T ss_dssp EEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSC--CCCCEEECTTSCEEEECCCTTCGGGGTCTTCC
T ss_pred EEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCc--CCceEEECCCCcEEEEECCCCCCccccCCCCC
Confidence 4444432 3 56777777654 11 11111 1111111 3457999999986664222
Q ss_pred -CeEEEEEcCCCC---ccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCC---eEEEEecCC------------
Q 022019 194 -KSVRVFDVHRPG---RDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQ---TSAIYREDN------------ 254 (304)
Q Consensus 194 -~~i~v~d~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg---~i~i~d~~~------------ 254 (304)
|.|.-++....- ..+.....+ ..++.. ...++|+|+.+.++++-...+ .|.+.....
T Consensus 168 ~G~I~ri~~dG~~p~~npf~~~~i~---a~G~rn-p~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~ 243 (354)
T 3a9g_A 168 AGKILRVDEEGRPPADNPFPNSPIW---SYGHRN-PQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAG 243 (354)
T ss_dssp SSEEEEECTTSCCCTTSSSTTCCEE---EECCSC-CCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCC
T ss_pred CeEEEEEcCCCCCCCCCCCCCCcEE---EEccCC-cceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCC
Confidence 345555543210 000000000 022222 467999995555555433222 244332211
Q ss_pred ----ceEeEEeccccCCeEEEEEC-------CCCcEEEEeeccCCeEEEEeccc
Q 022019 255 ----MELLYVLHGQEGGVTHVQFS-------RDGNYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 255 ----~~~~~~~~~~~~~v~~~~~~-------~~~~~l~~~~~~d~~i~vwd~~~ 297 (304)
..++..+.........+.|. .+|.++++.- ..+.|...++..
T Consensus 244 ~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~-~~~~v~~~~~~~ 296 (354)
T 3a9g_A 244 RGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACL-RGSMLAAVNFGD 296 (354)
T ss_dssp CTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEET-TTTEEEEEEECG
T ss_pred CCCCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEc-CCCEEEEEEECC
Confidence 02333441122356788883 4676666655 677888888875
No 313
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.02 E-value=0.011 Score=48.08 Aligned_cols=129 Identities=9% Similarity=0.099 Sum_probs=79.7
Q ss_pred ceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEee-----cCCeEEEEeecCccceeCC
Q 022019 62 FLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVT-----EGESVYDFCWFPHMSASDP 136 (304)
Q Consensus 62 ~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~~ 136 (304)
.|..+..||+|++||..+. ..|.|-.+..+.......... ..-.......+ ...+|..+.|+|...
T Consensus 67 ~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~----~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~---- 137 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQ----DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSY---- 137 (452)
T ss_dssp TTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHH----HTTEEEEEEGGGCC--CCCCEEEEEECTTBG----
T ss_pred ceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccc----cccceeEEEcCCcccCCCCceeEEEeccccC----
Confidence 5888999999999998865 478988887432211100000 00001111111 246799999999743
Q ss_pred CccEEEEEeCCCCEEEEEcCCCeeeE-Eeecccc----cccccceEEEEECCCCcEEEE-E--cCCeEEEE
Q 022019 137 TSCVFASTTRDHPIHLWDATTGLLRC-TYRAYDA----VDEITAAFSVAFNPTGTKIFA-G--YNKSVRVF 199 (304)
Q Consensus 137 ~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~----~~~~~~v~~i~~~~~~~~l~~-~--~d~~i~v~ 199 (304)
.+..|++-..|+.|++||+....... .+..... ......|.+++|.+++-.|++ . ..|.|+-.
T Consensus 138 ~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 138 RDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp GGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred CCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 57789999999999999998632111 2221110 011247889999998876664 3 56777654
No 314
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.77 E-value=0.075 Score=39.06 Aligned_cols=113 Identities=12% Similarity=0.080 Sum_probs=60.5
Q ss_pred CceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecC-ccceeCCCcc
Q 022019 61 NFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFP-HMSASDPTSC 139 (304)
Q Consensus 61 ~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~ 139 (304)
..+.+++|+|+|.+.+. .+|.+.-.+..+.....- ......|-..-|.- ..+.|.|+|.
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W------------------~~s~t~IG~~Gw~~F~a~~fD~~G~ 100 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNW------------------MGRAKKIGNGGWNQFQFLFFDPNGY 100 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCH------------------HHHCEEEECSCGGGCSEEEECTTSC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccc------------------cccccEecccccccceEEEECCCCC
Confidence 46889999999986666 677655555432111000 00001111111111 1224588998
Q ss_pred EEEEEeCCCCEEEEEcCCCeeeEEeeccccc---ccccceEEEEECCCCcEEEEEcCCeEE
Q 022019 140 VFASTTRDHPIHLWDATTGLLRCTYRAYDAV---DEITAAFSVAFNPTGTKIFAGYNKSVR 197 (304)
Q Consensus 140 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~---~~~~~v~~i~~~~~~~~l~~~~d~~i~ 197 (304)
+.++ .||.|+-++-.+.... .+...... ..-..+..|.|.|+|.+.++. |+.++
T Consensus 101 LYav--~dG~iyr~~pP~~~~~-~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~ly 157 (236)
T 1tl2_A 101 LYAV--SKDKLYKASPPQSDTD-NWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQFY 157 (236)
T ss_dssp EEEE--ETTEEEEESCCCSTTC-CHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEEE
T ss_pred EEEe--CCCEEEEeCCCcCCCC-ceeccccEeccCCCCceEEEEECCCceEEEEe-CCcEE
Confidence 8888 5688877764321110 00000000 011267899999999999988 88854
No 315
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.74 E-value=0.086 Score=49.67 Aligned_cols=196 Identities=14% Similarity=0.190 Sum_probs=112.9
Q ss_pred EcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCC
Q 022019 68 WSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRD 147 (304)
Q Consensus 68 ~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~d 147 (304)
.+|..+.+|.-. ..++.|||+.+........ -..+|.-..|. +++ .|+..+ +
T Consensus 73 MnP~~~iiALra-g~~lQiFnl~~k~klks~~------------------~~e~VvfWkWi------s~~--~l~lVT-~ 124 (1630)
T 1xi4_A 73 MNPASKVIALKA-GKTLQIFNIEMKSKMKAHT------------------MTDDVTFWKWI------SLN--TVALVT-D 124 (1630)
T ss_pred cCCCcceEEEec-CCeEEEeehHHhhhhcccc------------------cCCCceEEEec------CCC--eeEEEc-C
Confidence 455555555443 5689999987553322111 12456666773 222 444443 4
Q ss_pred CCEEEEEcCCC-eeeEEeecccccccccceEEEEECCCCcEEE-EE-------cCCeEEEEEcCCCCccceeeeeeeccc
Q 022019 148 HPIHLWDATTG-LLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-------YNKSVRVFDVHRPGRDFEKYSTLKGNK 218 (304)
Q Consensus 148 g~i~i~d~~~~-~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-------~d~~i~v~d~~~~~~~~~~~~~~~~~~ 218 (304)
..|+.|++... .+...+..+.... ...|..-..+++.+.++ +| ..|.+.+|..+.. .....
T Consensus 125 ~aVyHW~~~~~s~P~k~fdR~~~L~-~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~---------~sQ~i 194 (1630)
T 1xi4_A 125 NAVYHWSMEGESQPVKMFDRHSSLA-GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK---------VSQPI 194 (1630)
T ss_pred CeEEEeccCCCCccHHHHhcchhcc-cCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc---------cchhh
Confidence 56999999642 3333444443322 23677888899998888 44 2377888888642 22222
Q ss_pred cccccceeEEEee--cCCCcEEEEEec---CCeEEEEecCCc---eEeEE------ecc---ccCCeEEEEECCCCcEEE
Q 022019 219 EGQAGIMSAIAFS--PTHTGMLAIGSY---SQTSAIYREDNM---ELLYV------LHG---QEGGVTHVQFSRDGNYLY 281 (304)
Q Consensus 219 ~~~~~~v~~~~~~--p~~~~~l~~~~~---dg~i~i~d~~~~---~~~~~------~~~---~~~~v~~~~~~~~~~~l~ 281 (304)
.||.+....+... +....+++.+.. .+.++|.++... .+... +.. ...--.++..++.-..++
T Consensus 195 egha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy 274 (1630)
T 1xi4_A 195 EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVF 274 (1630)
T ss_pred hHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEE
Confidence 5555544444432 212223333332 268899888542 11111 111 122345677788888888
Q ss_pred EeeccCCeEEEEecccceeee
Q 022019 282 TGGRKDPYILCWDLRKAVQVV 302 (304)
Q Consensus 282 ~~~~~d~~i~vwd~~~~~~~~ 302 (304)
... .-|.|.++|+.+|.++.
T Consensus 275 ~it-k~G~~~~~d~~t~~~i~ 294 (1630)
T 1xi4_A 275 LIT-KYGYIHLYDLETGTCIY 294 (1630)
T ss_pred EEe-cCceEEEEecccchhhh
Confidence 888 89999999999998764
No 316
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.66 E-value=0.087 Score=38.74 Aligned_cols=144 Identities=11% Similarity=0.006 Sum_probs=72.5
Q ss_pred ceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccc-c--ccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccc
Q 022019 132 SASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDA-V--DEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDF 208 (304)
Q Consensus 132 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~--~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~ 208 (304)
++|+|+|.+.++ .+|.++-.+..+..... +..... . ..-.....+.|+|+|.+.++ .||.|+-++--+.+..
T Consensus 46 laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~-W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav-~dG~iyr~~pP~~~~~- 120 (236)
T 1tl2_A 46 LFLSPGGELYGV--LNDKIYKGTPPTHDNDN-WMGRAKKIGNGGWNQFQFLFFDPNGYLYAV-SKDKLYKASPPQSDTD- 120 (236)
T ss_dssp EEECTTSCEEEE--ETTEEEEESCCCSTTCC-HHHHCEEEECSCGGGCSEEEECTTSCEEEE-ETTEEEEESCCCSTTC-
T ss_pred EEECCCccEEEE--eCCeEEEECCCCCCccc-ccccccEecccccccceEEEECCCCCEEEe-CCCEEEEeCCCcCCCC-
Confidence 355888887777 66766665554321110 000000 0 00012368999999998888 7798887775332111
Q ss_pred eeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCce------EeEEec-cccCCeEEEEECCCCcEEE
Q 022019 209 EKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME------LLYVLH-GQEGGVTHVQFSRDGNYLY 281 (304)
Q Consensus 209 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~------~~~~~~-~~~~~v~~~~~~~~~~~l~ 281 (304)
..+..-......-=..+..+.|.| ++.+.++. |+.++-....+.. ....+- ..-...+.+.|.|+|...+
T Consensus 121 ~Wl~~a~~vg~~gw~~~~~lff~p-~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~ 197 (236)
T 1tl2_A 121 NWIARATEVGSGGWSGFKFLFFHP-NGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFG 197 (236)
T ss_dssp CHHHHSEEEECSSGGGEEEEEECT-TSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEE
T ss_pred ceeccccEeccCCCCceEEEEECC-CceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEE
Confidence 000000000011113478999999 67666655 7875433222111 011111 2222345577999887655
Q ss_pred Ee
Q 022019 282 TG 283 (304)
Q Consensus 282 ~~ 283 (304)
+.
T Consensus 198 v~ 199 (236)
T 1tl2_A 198 VQ 199 (236)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 317
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.64 E-value=0.16 Score=39.45 Aligned_cols=146 Identities=9% Similarity=0.119 Sum_probs=75.0
Q ss_pred CccEEEEEeCCC-----CEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEE-Ec-------CCeEEEEEcCC
Q 022019 137 TSCVFASTTRDH-----PIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA-GY-------NKSVRVFDVHR 203 (304)
Q Consensus 137 ~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~-~~-------d~~i~v~d~~~ 203 (304)
++.+++.|+.++ .+.+||+.+.+....-..... ......+.+ +++.++. |. -..+.+||+.+
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~---r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~ 182 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTR---RSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATT 182 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSC---CBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTT
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCc---ccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCC
Confidence 566777777553 478899887765443222111 111122222 4555554 32 24588999875
Q ss_pred CCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecC-----CeEEEEecCCceE--eEEeccccCCeEEEEECCC
Q 022019 204 PGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS-----QTSAIYREDNMEL--LYVLHGQEGGVTHVQFSRD 276 (304)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d-----g~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~~~ 276 (304)
. .......+. .. .... +++.. ++.+++.|+.+ ..+.+||+.+.+- +..+.........+.+ +
T Consensus 183 ~--~W~~~~~~p---~~-r~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~ 251 (302)
T 2xn4_A 183 N--EWTYIAEMS---TR-RSGA-GVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAV--N 251 (302)
T ss_dssp T--EEEEECCCS---SC-CBSC-EEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--T
T ss_pred C--cEEECCCCc---cc-cccc-cEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEE--C
Confidence 2 222221111 11 1111 22222 45678888765 3689999987642 2222211112222333 5
Q ss_pred CcEEEEeeccCC-----eEEEEecccce
Q 022019 277 GNYLYTGGRKDP-----YILCWDLRKAV 299 (304)
Q Consensus 277 ~~~l~~~~~~d~-----~i~vwd~~~~~ 299 (304)
+..++.|| .++ .+.+||+.+.+
T Consensus 252 ~~i~v~GG-~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 252 GLLYVVGG-DDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp TEEEEECC-BCSSSBCCCEEEEETTTTE
T ss_pred CEEEEECC-cCCCcccccEEEEcCCCCe
Confidence 77777777 543 48899987764
No 318
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.64 E-value=0.21 Score=40.84 Aligned_cols=202 Identities=11% Similarity=0.095 Sum_probs=118.9
Q ss_pred EEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEe
Q 022019 66 IKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTT 145 (304)
Q Consensus 66 i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~ 145 (304)
.-.+|..+.+|.-. ..++.|||+++..... ...-...|.-..|. + .+.|+..+
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnle~K~klk------------------s~~~~e~VvfWkWi------s--~~~l~lVT 123 (494)
T 1bpo_A 71 AIMNPASKVIALKA-GKTLQIFNIEMKSKMK------------------AHTMTDDVTFWKWI------S--LNTVALVT 123 (494)
T ss_dssp EEECSSSSCEEEEE-TTEEEEEETTTTEEEE------------------EEECSSCCCEEEEE------E--TTEEEEEC
T ss_pred eeeCCCCcEEEEec-CCeEEEEchHHhhhhc------------------ceecCCCceEEEec------C--CCeEEEEc
Confidence 34566666665544 5689999998543221 11112455556663 2 22444444
Q ss_pred CCCCEEEEEcCC-CeeeEEeecccccccccceEEEEECCCCcEEE-EE---cC----CeEEEEEcCCCCccc--------
Q 022019 146 RDHPIHLWDATT-GLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG---YN----KSVRVFDVHRPGRDF-------- 208 (304)
Q Consensus 146 ~dg~i~i~d~~~-~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~---~d----~~i~v~d~~~~~~~~-------- 208 (304)
+..|+-|++.. ..+...+.-+.... ...|..-..+++.+.++ +| .+ |.+.+|..+......
T Consensus 124 -~taVyHWsi~~~s~P~kvFdR~~~L~-~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F 201 (494)
T 1bpo_A 124 -DNAVYHWSMEGESQPVKMFDRHSSLA-GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASF 201 (494)
T ss_dssp -SSEEEEEESSSSCCCEEEEECCGGGT-TCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEECCSEEEE
T ss_pred -CCeeEEecccCCCCchhheecchhcc-cceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchheeeeeee
Confidence 45699999874 34555555555433 34677777788888777 43 22 456666665421000
Q ss_pred -----------eeeee--------------------------------eeccccccccceeEEEeecCCCcEEEEEecCC
Q 022019 209 -----------EKYST--------------------------------LKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQ 245 (304)
Q Consensus 209 -----------~~~~~--------------------------------~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg 245 (304)
..+.. +....+...+-..++..++ .-.++..-+.-|
T Consensus 202 ~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~-kygviyviTK~G 280 (494)
T 1bpo_A 202 AQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISE-KHDVVFLITKYG 280 (494)
T ss_dssp EEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEET-TTTEEEEEETTS
T ss_pred EEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecc-cCCEEEEEecCc
Confidence 00000 0000011122344666677 444778889999
Q ss_pred eEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEecccc
Q 022019 246 TSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 246 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~ 298 (304)
.|++||+.++.++..-+-....|...+-+....-++... ..|.|.--.++..
T Consensus 281 ~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vn-r~GqVl~v~v~e~ 332 (494)
T 1bpo_A 281 YIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVN-RKGQVLSVCVEEE 332 (494)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEE-TTCEEEEEEECTT
T ss_pred eEEEEecccceeeeeecccCCceEEecccCCCCcEEEEc-cCceEEEEEEccc
Confidence 999999999999988876677777766666655666677 7888776666554
No 319
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.62 E-value=0.2 Score=40.14 Aligned_cols=70 Identities=9% Similarity=0.082 Sum_probs=43.2
Q ss_pred ceeEEEeecC------CCcEEEEEecCCeEEEEecCCceEeEE--e-ccccCCeEEEEECCCCcEEEEeeccCCeEEEEe
Q 022019 224 IMSAIAFSPT------HTGMLAIGSYSQTSAIYREDNMELLYV--L-HGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWD 294 (304)
Q Consensus 224 ~v~~~~~~p~------~~~~l~~~~~dg~i~i~d~~~~~~~~~--~-~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd 294 (304)
.+..+.|.+. .+.++++.-..+.|...++..++.+.. + ......+..+++.|||.+.++....+| +||.
T Consensus 272 ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td~~~g--~I~r 349 (353)
T 2g8s_A 272 AVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTDESSG--ELLK 349 (353)
T ss_dssp CEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEECSTTE--EEEE
T ss_pred CcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEEeCCCC--EEEE
Confidence 4667777641 255666666678888888876544322 2 222347899999999985554321344 4554
Q ss_pred c
Q 022019 295 L 295 (304)
Q Consensus 295 ~ 295 (304)
+
T Consensus 350 i 350 (353)
T 2g8s_A 350 V 350 (353)
T ss_dssp E
T ss_pred E
Confidence 4
No 320
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.56 E-value=0.19 Score=39.25 Aligned_cols=146 Identities=10% Similarity=0.193 Sum_probs=75.0
Q ss_pred CccEEEEEeCC-----CCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cC-----CeEEEEEcCCCC
Q 022019 137 TSCVFASTTRD-----HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YN-----KSVRVFDVHRPG 205 (304)
Q Consensus 137 ~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d-----~~i~v~d~~~~~ 205 (304)
++.+++.|+.+ ..+.+||+.+.+....-..... ......+.+ ++++++.| .+ ..+.+||+.+.
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~---r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~- 194 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTR---RIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERN- 194 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSC---CBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTT-
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCcc---ccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCC-
Confidence 55667776543 3588999987764432221111 011122333 45555543 33 46889998752
Q ss_pred ccceeeeeeeccccccccceeEEEeecCCCcEEEEEecC-----CeEEEEecCCceE--eEEeccccCCeEEEEECCCCc
Q 022019 206 RDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS-----QTSAIYREDNMEL--LYVLHGQEGGVTHVQFSRDGN 278 (304)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d-----g~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~~~~~ 278 (304)
.......+. ........+.+ ++.+++.|+.+ ..+.+||+.+.+- +..+.........+.+ +++
T Consensus 195 -~W~~~~~~p----~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~ 264 (308)
T 1zgk_A 195 -EWRMITAMN----TIRSGAGVCVL---HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVH--QGR 264 (308)
T ss_dssp -EEEECCCCS----SCCBSCEEEEE---TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTE
T ss_pred -eEeeCCCCC----CccccceEEEE---CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEE--CCE
Confidence 222221111 11111222222 45677888765 4699999887643 2222221222233333 567
Q ss_pred EEEEeeccC-----CeEEEEecccce
Q 022019 279 YLYTGGRKD-----PYILCWDLRKAV 299 (304)
Q Consensus 279 ~l~~~~~~d-----~~i~vwd~~~~~ 299 (304)
.++.|| .+ ..+.+||+.+.+
T Consensus 265 i~v~GG-~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 265 IYVLGG-YDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp EEEECC-BCSSCBCCEEEEEETTTTE
T ss_pred EEEEcC-cCCCcccceEEEEcCCCCE
Confidence 777777 43 457888887754
No 321
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.52 E-value=0.2 Score=39.16 Aligned_cols=146 Identities=8% Similarity=0.155 Sum_probs=73.8
Q ss_pred CccEEEEEeCC--------CCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-c-C-----CeEEEEEc
Q 022019 137 TSCVFASTTRD--------HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-Y-N-----KSVRVFDV 201 (304)
Q Consensus 137 ~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~-d-----~~i~v~d~ 201 (304)
++.+++.|+.+ ..+.+||+.+.+....-..+.. . .-.++.. -+++.++.| . + ..+.+||+
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~---r-~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~ 172 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYV---V-YGHTVLS-HMDLVYVIGGKGSDRKCLNKMCVYDP 172 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSC---C-BSCEEEE-ETTEEEEECCBCTTSCBCCCEEEEET
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCc---c-cceeEEE-ECCEEEEEeCCCCCCcccceEEEEeC
Confidence 55667777632 4589999988764332221111 0 1112222 245555544 4 2 46889998
Q ss_pred CCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCC-----eEEEEecCCce--EeEEeccccCCeEEEEEC
Q 022019 202 HRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQ-----TSAIYREDNME--LLYVLHGQEGGVTHVQFS 274 (304)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg-----~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~ 274 (304)
.+. .......+. . ..... +++.. ++.+++.|+.++ .+.+||+.+.+ .+..+.........+.+
T Consensus 173 ~~~--~W~~~~~~p---~-~r~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~- 242 (315)
T 4asc_A 173 KKF--EWKELAPMQ---T-ARSLF-GATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSL- 242 (315)
T ss_dssp TTT--EEEECCCCS---S-CCBSC-EEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE-
T ss_pred CCC--eEEECCCCC---C-chhce-EEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEEE-
Confidence 762 222221111 1 11111 22222 456788887654 58899987764 22222222222233333
Q ss_pred CCCcEEEEeeccC--------------CeEEEEecccce
Q 022019 275 RDGNYLYTGGRKD--------------PYILCWDLRKAV 299 (304)
Q Consensus 275 ~~~~~l~~~~~~d--------------~~i~vwd~~~~~ 299 (304)
+++.++.|| .+ ..+.+||+.+.+
T Consensus 243 -~~~l~v~GG-~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 279 (315)
T 4asc_A 243 -VGTLYAIGG-FATLETESGELVPTELNDIWRYNEEEKK 279 (315)
T ss_dssp -TTEEEEEEE-EEEEECTTSCEEEEEEEEEEEEETTTTE
T ss_pred -CCEEEEECC-ccccCcCCccccccccCcEEEecCCCCh
Confidence 567777777 43 246788887653
No 322
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.45 E-value=0.24 Score=39.13 Aligned_cols=194 Identities=9% Similarity=0.047 Sum_probs=100.0
Q ss_pred CCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCcc
Q 022019 60 NNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSC 139 (304)
Q Consensus 60 ~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 139 (304)
...+.+|.|.+++..+++ +.+|.| +...+.++.-....... ......+..+.+ ++ +.
T Consensus 35 ~~~~~~v~~~~~~~~~~~-G~~g~i-~~s~DgG~tW~~~~~~~-------------~~~~~~~~~i~~-------~~-~~ 91 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWLV-GVNATL-METRDGGQTWEPRTLVL-------------DHSDYRFNSVSF-------QG-NE 91 (327)
T ss_dssp SSCEEEEEESSSSCEEEE-ETTTEE-EEESSTTSSCEECCCCC-------------SCCCCEEEEEEE-------ET-TE
T ss_pred CCcEEEEEECCCCcEEEE-cCCCeE-EEeCCCCCCCeECCCCC-------------CCCCccEEEEEe-------cC-Ce
Confidence 346899999877777774 456654 33333222111110000 001234566655 33 33
Q ss_pred EEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccceeeeeeecccc
Q 022019 140 VFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKE 219 (304)
Q Consensus 140 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~ 219 (304)
.++ ++..+.|+. ....|+.-....... .....+..+.+.+++..++++.++.|. --...+....... .
T Consensus 92 ~~~-~g~~g~i~~-S~DgG~tW~~~~~~~--~~~~~~~~i~~~~~~~~~~~~~~g~v~--~S~DgG~tW~~~~------~ 159 (327)
T 2xbg_A 92 GWI-VGEPPIMLH-TTDGGQSWSQIPLDP--KLPGSPRLIKALGNGSAEMITNVGAIY--RTKDSGKNWQALV------Q 159 (327)
T ss_dssp EEE-EEETTEEEE-ESSTTSSCEECCCCT--TCSSCEEEEEEEETTEEEEEETTCCEE--EESSTTSSEEEEE------C
T ss_pred EEE-EECCCeEEE-ECCCCCCceECcccc--CCCCCeEEEEEECCCCEEEEeCCccEE--EEcCCCCCCEEee------c
Confidence 344 445564433 333344322222111 011246678777777777777666543 2233333333222 1
Q ss_pred ccccceeEEEeecCCCcEEEEEecCCeEEE-Eec--CCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEe
Q 022019 220 GQAGIMSAIAFSPTHTGMLAIGSYSQTSAI-YRE--DNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWD 294 (304)
Q Consensus 220 ~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i-~d~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd 294 (304)
.....+..+.+.| ++.+++++. +|.+.. .|- .+.+.+. ......+..+.+.+++..++. + .+|.+++.+
T Consensus 160 ~~~~~~~~~~~~~-~~~~~~~g~-~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~~-~-~~G~~~~s~ 231 (327)
T 2xbg_A 160 EAIGVMRNLNRSP-SGEYVAVSS-RGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLWMI-V-NGGKIAFSD 231 (327)
T ss_dssp SCCCCEEEEEECT-TSCEEEEET-TSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEEEE-E-TTTEEEEEE
T ss_pred CCCcceEEEEEcC-CCcEEEEEC-CCcEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEEEE-e-CCceEEEec
Confidence 2334578899999 666666554 454443 442 3444442 234567899999999876654 4 578777764
No 323
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.45 E-value=0.13 Score=42.82 Aligned_cols=108 Identities=11% Similarity=0.135 Sum_probs=63.0
Q ss_pred ceEEEEECCCCcEEEEEcCC-eEEEEEcCCCCccceeeeeeecccc--ccccceeEEEeecC---CCcEEEEEec-----
Q 022019 175 AAFSVAFNPTGTKIFAGYNK-SVRVFDVHRPGRDFEKYSTLKGNKE--GQAGIMSAIAFSPT---HTGMLAIGSY----- 243 (304)
Q Consensus 175 ~v~~i~~~~~~~~l~~~~d~-~i~v~d~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~p~---~~~~l~~~~~----- 243 (304)
..+.|+|.|+|+++++...+ .|++++...+. ...+..+..... .....+..|+|+|+ ++.++++-+.
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~--~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGS--VKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCC--EEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCc--EeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 55799999999988887654 78888764321 122222211111 12345779999995 5655555543
Q ss_pred -------CCeEEEEecCCc-------eEeE-Eec-cccCCeEEEEECCCCcEEEEee
Q 022019 244 -------SQTSAIYREDNM-------ELLY-VLH-GQEGGVTHVQFSRDGNYLYTGG 284 (304)
Q Consensus 244 -------dg~i~i~d~~~~-------~~~~-~~~-~~~~~v~~~~~~~~~~~l~~~~ 284 (304)
...|.-|+.... +.+. .+. ........|.|.|||.+.++.+
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 234555554321 1222 122 1123578999999998777665
No 324
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.44 E-value=0.25 Score=39.37 Aligned_cols=54 Identities=13% Similarity=0.063 Sum_probs=29.5
Q ss_pred eEEEEecCCce--EeEEeccccCCeEEEEECCCCcEEEEeeccCC------eEEEEecccceeee
Q 022019 246 TSAIYREDNME--LLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDP------YILCWDLRKAVQVV 302 (304)
Q Consensus 246 ~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~------~i~vwd~~~~~~~~ 302 (304)
.+.+||+.+.+ .+..+......-.++.+ +++.++.|| .++ .|.++++++++.+.
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG-~~~~~~~~~~v~~l~~~~~~~~~ 347 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAYGVSLPW--NNSLLIIGG-ETAGGKAVTDSVLITVKDNKVTV 347 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBSSEEEEE--TTEEEEEEE-ECGGGCEEEEEEEEEC-CCSCEE
T ss_pred eEEEEecCCCceeeCCCCCCCcccceeEEe--CCEEEEEee-eCCCCCEeeeEEEEEEcCcEeEe
Confidence 57889987643 44444432222233333 677778887 442 46667888877654
No 325
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.31 E-value=0.35 Score=39.61 Aligned_cols=107 Identities=9% Similarity=0.089 Sum_probs=63.7
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccceeeeee
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTL 214 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~~~ 214 (304)
+|..+.+|.=. ..++.+||+++.+....+.... .|.--.|-.+ +.|+.-.+..|+-|++.....+.+.+..
T Consensus 74 nP~~~iiALra-g~~lQiFnle~K~klks~~~~e------~VvfWkWis~-~~l~lVT~taVyHWsi~~~s~P~kvFdR- 144 (494)
T 1bpo_A 74 NPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD------DVTFWKWISL-NTVALVTDNAVYHWSMEGESQPVKMFDR- 144 (494)
T ss_dssp CSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSS------CCCEEEEEET-TEEEEECSSEEEEEESSSSCCCEEEEEC-
T ss_pred CCCCcEEEEec-CCeEEEEchHHhhhhcceecCC------CceEEEecCC-CeEEEEcCCeeEEecccCCCCchhheec-
Confidence 56666666654 6789999999998888777655 5666666543 4555556788999999763333322221
Q ss_pred eccccccccceeEEEeecCCCcEEE-EEe------cCCeEEEEecC
Q 022019 215 KGNKEGQAGIMSAIAFSPTHTGMLA-IGS------YSQTSAIYRED 253 (304)
Q Consensus 215 ~~~~~~~~~~v~~~~~~p~~~~~l~-~~~------~dg~i~i~d~~ 253 (304)
..... ...|..-..++ +.++++ +|- -.|.+.+|..+
T Consensus 145 ~~~L~--~~QIInY~~d~-~~kW~~l~GI~~~~~~v~G~mQLYS~e 187 (494)
T 1bpo_A 145 HSSLA--GCQIINYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSVD 187 (494)
T ss_dssp CGGGT--TCEEEEEEECT-TSSEEEEEEEEEETTEEEEEEEEEEST
T ss_pred chhcc--cceEEEEEECC-CCCeEEEEeecccCCcccceEEEeecc
Confidence 11111 23466666677 333333 332 13456666654
No 326
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.19 E-value=0.64 Score=41.43 Aligned_cols=200 Identities=8% Similarity=0.062 Sum_probs=108.0
Q ss_pred CCceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCcc
Q 022019 60 NNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSC 139 (304)
Q Consensus 60 ~~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 139 (304)
...|.++.-..+| .|..|+.+| +..||..+...... . .. ....|.++.. .++.
T Consensus 62 ~~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~~~----~----~~---------~~~~i~~i~~--------~~g~ 114 (758)
T 3ott_A 62 NTRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYEQP----E----TD---------FPTDVRTMAL--------QGDT 114 (758)
T ss_dssp SSCEEEEEEETTT-EEEEEETTE-EEEEETTTTEECCC----S----CC---------CCSCEEEEEE--------ETTE
T ss_pred CceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEECc----c----cC---------CCceEEEEEe--------cCCc
Confidence 4568898887776 455556555 78899875432210 0 00 0122333321 1343
Q ss_pred EEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccceeeeeeecccc
Q 022019 140 VFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKE 219 (304)
Q Consensus 140 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~ 219 (304)
|..++.+ -+..+|..+++... +...........|.++..++++.+.++.. +.+..||.... .+..+. ......
T Consensus 115 -lWigt~~-Gl~~~~~~~~~~~~-~~~~~~~l~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~~~--~~~~~~-~~~~~~ 187 (758)
T 3ott_A 115 -LWLGALN-GLYTYQLQSRKLTS-FDTRRNGLPNNTIYSIIRTKDNQIYVGTY-NGLCRYIPSNG--KFEGIP-LPVHSS 187 (758)
T ss_dssp -EEEEETT-EEEEEETTTCCEEE-ECHHHHCCSCSCEEEEEECTTCCEEEEET-TEEEEEETTTT--EEEEEC-CCCCTT
T ss_pred -EEEEcCC-cceeEeCCCCeEEE-eccCCCCcCCCeEEEEEEcCCCCEEEEeC-CCHhhCccCCC--ceEEec-CCCccc
Confidence 5555555 48889987665432 21110001123688888888888776544 46888887542 111111 000000
Q ss_pred ccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEecccc
Q 022019 220 GQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 220 ~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~ 298 (304)
.....|.++...+ .+..|.+|+. +-+..+|..+++...........|.++...++|.+.+ |. .+| |.+++..++
T Consensus 188 ~~~~~i~~i~~d~-~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gT-~~G-l~~~~~~~~ 261 (758)
T 3ott_A 188 QSNLFVNSLLEDT-TRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLA-GT-DNG-LYVYHNDTT 261 (758)
T ss_dssp CSSCCEEEEEEET-TTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEE-EE-TTE-EEEECCTTS
T ss_pred cccceeEEEEEEC-CCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEE-Ee-CCc-eeEEecCCC
Confidence 1123477887777 4444555664 4688899876643221111234588888888887554 44 444 777877654
No 327
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.09 E-value=0.23 Score=38.51 Aligned_cols=146 Identities=10% Similarity=0.173 Sum_probs=75.7
Q ss_pred CccEEEEEeCC-----CCEEEEEcCCCe---eeEEeecccccccccceEEEEECCCCcEEEEE-cC-----CeEEEEEcC
Q 022019 137 TSCVFASTTRD-----HPIHLWDATTGL---LRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YN-----KSVRVFDVH 202 (304)
Q Consensus 137 ~~~~l~~~~~d-----g~i~i~d~~~~~---~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d-----~~i~v~d~~ 202 (304)
++.+++.|+.+ ..+.+||+.+.+ ....-..... ......+.+ +++.++.| .+ ..+.+||+.
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~---r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~ 136 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVR---RGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPN 136 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSC---CBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETT
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCC---ccceeEEEE--CCEEEEEcccCCCcccceEEEEcCC
Confidence 56677777754 468999998776 4332221111 011122222 45555544 32 468889986
Q ss_pred CCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecC-----CeEEEEecCCceE--eEEeccccCCeEEEEECC
Q 022019 203 RPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS-----QTSAIYREDNMEL--LYVLHGQEGGVTHVQFSR 275 (304)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d-----g~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~~ 275 (304)
+. ....+..+.... ... +++.. ++.+++.|+.+ ..+.+||+.+.+- +..+.........+.+
T Consensus 137 ~~--~W~~~~~~p~~r----~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-- 205 (301)
T 2vpj_A 137 ID--QWSMLGDMQTAR----EGA-GLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL-- 205 (301)
T ss_dssp TT--EEEEEEECSSCC----BSC-EEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--
T ss_pred CC--eEEECCCCCCCc----ccc-eEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--
Confidence 52 222222221111 111 22222 45677777765 4589999877643 2222221222233333
Q ss_pred CCcEEEEeeccC-----CeEEEEecccce
Q 022019 276 DGNYLYTGGRKD-----PYILCWDLRKAV 299 (304)
Q Consensus 276 ~~~~l~~~~~~d-----~~i~vwd~~~~~ 299 (304)
++..++.|+ .+ ..+.+||+.+.+
T Consensus 206 ~~~i~v~GG-~~~~~~~~~v~~yd~~~~~ 233 (301)
T 2vpj_A 206 NDHIYVVGG-FDGTAHLSSVEAYNIRTDS 233 (301)
T ss_dssp TTEEEEECC-BCSSSBCCCEEEEETTTTE
T ss_pred CCEEEEEeC-CCCCcccceEEEEeCCCCc
Confidence 567777777 43 468899987764
No 328
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.02 E-value=0.048 Score=45.92 Aligned_cols=108 Identities=10% Similarity=0.046 Sum_probs=67.9
Q ss_pred ceEEEEECCCCcEEEE-E-cCCeEEEEEcCCCCccce-----eeeeeeccccccccceeEEEeecCCCcEEEEEecCCeE
Q 022019 175 AAFSVAFNPTGTKIFA-G-YNKSVRVFDVHRPGRDFE-----KYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTS 247 (304)
Q Consensus 175 ~v~~i~~~~~~~~l~~-~-~d~~i~v~d~~~~~~~~~-----~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i 247 (304)
....+..+|||+++++ | .+.++.++|++.....+. .-..+..... -.-.....+|.+ .+..+.+-.-|..|
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~-~G~aYTtlfidSqv 401 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDG-RGNAYTTLFIDSQV 401 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECS-SSEEEEEETTTTEE
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECC-CCceEeeeeecceE
Confidence 4567899999999995 5 899999999974211000 0011111111 122356789999 66666666789999
Q ss_pred EEEecCCc----------eEeEEeccccCCeEEEE-----ECCCCcEEEEee
Q 022019 248 AIYREDNM----------ELLYVLHGQEGGVTHVQ-----FSRDGNYLYTGG 284 (304)
Q Consensus 248 ~i~d~~~~----------~~~~~~~~~~~~v~~~~-----~~~~~~~l~~~~ 284 (304)
.-|++... ..+..+..|-.+-.-.+ -.|||+||++..
T Consensus 402 vkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 402 VKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp EEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred EEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 99998653 35566665544322221 257888888876
No 329
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=95.94 E-value=0.25 Score=38.43 Aligned_cols=146 Identities=8% Similarity=0.106 Sum_probs=75.0
Q ss_pred CccEEEEEeCC----CCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEE-EcC------CeEEEEEcCCCC
Q 022019 137 TSCVFASTTRD----HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA-GYN------KSVRVFDVHRPG 205 (304)
Q Consensus 137 ~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~-~~d------~~i~v~d~~~~~ 205 (304)
++.+++.|+.+ ..+.+||+.+.+....-...... .....+.+ ++++++. |.+ ..+.+||..+.
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r---~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~- 128 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPR---DSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTE- 128 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCC---BSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTT-
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccc---cceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCC-
Confidence 56677777754 56889999887654432222111 01122232 4555554 443 45889998763
Q ss_pred ccceeeeeeeccccccccceeEEEeecCCCcEEEEEec---------CCeEEEEecCCceE--eEEeccccCCeEEEEEC
Q 022019 206 RDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSY---------SQTSAIYREDNMEL--LYVLHGQEGGVTHVQFS 274 (304)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~---------dg~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~ 274 (304)
.......+.. . .... +++.. ++.+++.|+. -..+.+||+.+.+- +..+......-..+.+
T Consensus 129 -~W~~~~~~p~---~-r~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~- 199 (306)
T 3ii7_A 129 -SWHTKPSMLT---Q-RCSH-GMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV- 199 (306)
T ss_dssp -EEEEECCCSS---C-CBSC-EEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-
T ss_pred -ceEeCCCCcC---C-ccee-EEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE-
Confidence 2222211111 1 1111 22222 4567777764 34588999887642 2222211122223333
Q ss_pred CCCcEEEEeeccC-----CeEEEEecccce
Q 022019 275 RDGNYLYTGGRKD-----PYILCWDLRKAV 299 (304)
Q Consensus 275 ~~~~~l~~~~~~d-----~~i~vwd~~~~~ 299 (304)
+++.++.|| .+ ..+.+||+.+.+
T Consensus 200 -~~~i~v~GG-~~~~~~~~~~~~yd~~~~~ 227 (306)
T 3ii7_A 200 -KDKIFAVGG-QNGLGGLDNVEYYDIKLNE 227 (306)
T ss_dssp -TTEEEEECC-EETTEEBCCEEEEETTTTE
T ss_pred -CCEEEEEeC-CCCCCCCceEEEeeCCCCc
Confidence 567777776 43 358888887754
No 330
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.93 E-value=0.012 Score=46.54 Aligned_cols=198 Identities=12% Similarity=0.104 Sum_probs=94.7
Q ss_pred CeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEE-eCCCCEE
Q 022019 73 SSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFAST-TRDHPIH 151 (304)
Q Consensus 73 ~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~-~~dg~i~ 151 (304)
..++.++.||.|.-.|..+++.......... .++..... + +...++..++.. ..||.|+
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~----------------~p~~~~~~-~---~~~~~~~~~vv~p~~dG~l~ 70 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENF----------------QPLIEIQE-P---SRLETYETLIIEPFGDGNIY 70 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGS----------------CCSEECCC-S---CTTTSSEEEEECCSTTTEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCcc----------------CCcEEecC-C---ccccCCcEEEEEECCCCEEE
Confidence 3677788899999999888766544432200 01111000 0 001133444444 5899999
Q ss_pred EEEcCCCeeeEEeecccccccccceEE---EEE------CCCCcEEEEEcCCeEEEEEcCCCCccceeeeeeeccccccc
Q 022019 152 LWDATTGLLRCTYRAYDAVDEITAAFS---VAF------NPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQA 222 (304)
Q Consensus 152 i~d~~~~~~~~~~~~~~~~~~~~~v~~---i~~------~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~ 222 (304)
.++..+|.....+...... ...++.. ... +.++..++.+.++.+...|++++.... .... ....
T Consensus 71 a~~~~~G~~~~~~~~~~lv-~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W----~~~~--~~~~ 143 (339)
T 2be1_A 71 YFNAHQGLQKLPLSIRQLV-STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIIS----AFGP--GSKN 143 (339)
T ss_dssp EEETTTEEEEEEEEHHHHH-TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEE----EEST--TCBC
T ss_pred EEECCCCcEEeeeccccce-eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEE----EEec--CCCc
Confidence 9999888655444433211 1111111 001 133444445599999999998863222 1111 0000
Q ss_pred cc-----eeEEE---eec-CCCcEEEEEecCCeEEEEecCCceEeEEec-----cccCC--e-EEEEECCCCcEEEEeec
Q 022019 223 GI-----MSAIA---FSP-THTGMLAIGSYSQTSAIYREDNMELLYVLH-----GQEGG--V-THVQFSRDGNYLYTGGR 285 (304)
Q Consensus 223 ~~-----v~~~~---~~p-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-----~~~~~--v-~~~~~~~~~~~l~~~~~ 285 (304)
.. ..|.. +.. ..+..++.+..+..+.+.+ ++++ +..+. ..... + ..-..+.|+.+++ ++
T Consensus 144 ~~~~~~~e~~~~~~d~~~d~~~~~v~ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~~~-~~- 219 (339)
T 2be1_A 144 GYFGSQSVDCSPEEKIKLQECENMIVIGKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMCIA-PF- 219 (339)
T ss_dssp C--------------------CCEEEEEEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCCEE-EE-
T ss_pred ccccccccccccccccccccCCCeEEEecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcEEE-EC-
Confidence 00 00111 100 1234677777777777766 4443 21111 00000 0 0001123466644 56
Q ss_pred cCCeEEEEecccceee
Q 022019 286 KDPYILCWDLRKAVQV 301 (304)
Q Consensus 286 ~d~~i~vwd~~~~~~~ 301 (304)
.||.|..+|..+|+.+
T Consensus 220 ~dg~v~A~d~~~G~~~ 235 (339)
T 2be1_A 220 RDKSLLASDLDFRIAR 235 (339)
T ss_dssp TTTEEEEECSTTCCEE
T ss_pred CCCEEEEEECCCCcEE
Confidence 7888888888887654
No 331
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.80 E-value=0.32 Score=37.69 Aligned_cols=146 Identities=14% Similarity=0.243 Sum_probs=74.4
Q ss_pred CccEEEEEeCC-----CCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EEcC-----CeEEEEEcCCCC
Q 022019 137 TSCVFASTTRD-----HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AGYN-----KSVRVFDVHRPG 205 (304)
Q Consensus 137 ~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~~d-----~~i~v~d~~~~~ 205 (304)
++.+++.|+.+ ..+.+||..+.+....-...... .....+.+ ++..++ .|.+ ..+.+||+.+.
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r---~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~- 134 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRR---STLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSN- 134 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCC---BSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTT-
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccc---cceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCC-
Confidence 56677777654 35889999887654332221110 01122222 455555 4443 25778888652
Q ss_pred ccceeeeeeeccccccccceeEEEeecCCCcEEEEEecC-------CeEEEEecCCceE--eEEeccccCCeEEEEECCC
Q 022019 206 RDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS-------QTSAIYREDNMEL--LYVLHGQEGGVTHVQFSRD 276 (304)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d-------g~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~~~ 276 (304)
.......+. . ..... +++.. ++.+++.|+.+ ..+.+||+.+.+- +..+.........+.+ +
T Consensus 135 -~W~~~~~~p---~-~r~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~ 204 (302)
T 2xn4_A 135 -EWFHVAPMN---T-RRSSV-GVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--N 204 (302)
T ss_dssp -EEEEECCCS---S-CCBSC-EEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--T
T ss_pred -eEeecCCCC---C-cccCc-eEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--C
Confidence 222222111 1 11111 22222 45677777653 3588999887642 2222222222233333 5
Q ss_pred CcEEEEeeccC-----CeEEEEecccce
Q 022019 277 GNYLYTGGRKD-----PYILCWDLRKAV 299 (304)
Q Consensus 277 ~~~l~~~~~~d-----~~i~vwd~~~~~ 299 (304)
+..++.|| .+ ..+.+||+.+.+
T Consensus 205 ~~iyv~GG-~~~~~~~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 205 NLLYAVGG-HDGPLVRKSVEVYDPTTNA 231 (302)
T ss_dssp TEEEEECC-BSSSSBCCCEEEEETTTTE
T ss_pred CEEEEECC-CCCCcccceEEEEeCCCCC
Confidence 67777777 44 368889987754
No 332
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=95.68 E-value=0.57 Score=39.01 Aligned_cols=109 Identities=12% Similarity=0.121 Sum_probs=62.0
Q ss_pred ceEEEEECCCCc--EEEEEcCCeEEEEEcCCCCccceeeeeeecccc-----ccccceeEEEeecC---CCcEEEEEecC
Q 022019 175 AAFSVAFNPTGT--KIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKE-----GQAGIMSAIAFSPT---HTGMLAIGSYS 244 (304)
Q Consensus 175 ~v~~i~~~~~~~--~l~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~p~---~~~~l~~~~~d 244 (304)
..+.|+|.|++. ++++...|.|++++.... .....+..+..... .....+..|+|+|+ ++.++++-+.+
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~-~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGE-IFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSC-BCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCC-eeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 567999999985 666778999999975321 11111111111111 12345789999994 24455554432
Q ss_pred ------------CeEEEEecCC----------ceEeEEec--cccCCeEEEEECCCCcEEEEee
Q 022019 245 ------------QTSAIYREDN----------MELLYVLH--GQEGGVTHVQFSRDGNYLYTGG 284 (304)
Q Consensus 245 ------------g~i~i~d~~~----------~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~ 284 (304)
..|.-|.+.. .+.+..+. ........|.|.|||.+.++.+
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~G 157 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILG 157 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEEC
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeC
Confidence 1344454431 23333332 2223568899999998777766
No 333
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.66 E-value=0.63 Score=37.04 Aligned_cols=112 Identities=10% Similarity=0.040 Sum_probs=59.0
Q ss_pred ceEEEEECCCCcEEEE--EcCCeEEEEEcCCCCcc---ce-------eeeeeeccccccccceeEEEeecCCCcEEEEEe
Q 022019 175 AAFSVAFNPTGTKIFA--GYNKSVRVFDVHRPGRD---FE-------KYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS 242 (304)
Q Consensus 175 ~v~~i~~~~~~~~l~~--~~d~~i~v~d~~~~~~~---~~-------~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~ 242 (304)
....++|+|+|.++++ +.++.=.|--+..+..- .. .+.........+......++|.. +.++...-
T Consensus 203 Np~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~G~~~~~--g~~~~~~l 280 (347)
T 3das_A 203 NVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPSGIAYAE--GSVWMAGL 280 (347)
T ss_dssp BCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEEEEEEET--TEEEEEES
T ss_pred CcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCCcceEEEc--Cceeeccc
Confidence 4568999998887774 34443344333332110 00 00000000011112355677764 44555555
Q ss_pred cCCeEEEEecCCceE----eEEeccccCCeEEEEECCCCcEEEEeeccCC
Q 022019 243 YSQTSAIYREDNMEL----LYVLHGQEGGVTHVQFSRDGNYLYTGGRKDP 288 (304)
Q Consensus 243 ~dg~i~i~d~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~ 288 (304)
..+.|....+..... ...+.+....+..+...|||.+.++..+.||
T Consensus 281 ~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td~~~g 330 (347)
T 3das_A 281 RGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTSNTDG 330 (347)
T ss_dssp TTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEECTTSS
T ss_pred cCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEcCCCC
Confidence 556676666655432 2234444567999999999987666553454
No 334
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.62 E-value=0.14 Score=40.61 Aligned_cols=117 Identities=10% Similarity=0.046 Sum_probs=68.3
Q ss_pred cEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEE---CCCCcEEEE--EcCCeEEEEEcCCCCccceeeee
Q 022019 139 CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAF---NPTGTKIFA--GYNKSVRVFDVHRPGRDFEKYST 213 (304)
Q Consensus 139 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~---~~~~~~l~~--~~d~~i~v~d~~~~~~~~~~~~~ 213 (304)
.++++++.||.|+-+|..+|+....+..... .++....- ..++..++. ..||.++.++...+... ..
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~----~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~----~~ 82 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENF----QPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQK----LP 82 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGS----CCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEE----EE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCcc----CCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEE----ee
Confidence 3688899999999999999999888765410 01111110 013344444 37899999997653111 11
Q ss_pred eeccccccccceeE---EEe-ec---CCCcEEEEEecCCeEEEEecCCceEeEEecc
Q 022019 214 LKGNKEGQAGIMSA---IAF-SP---THTGMLAIGSYSQTSAIYREDNMELLYVLHG 263 (304)
Q Consensus 214 ~~~~~~~~~~~v~~---~~~-~p---~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 263 (304)
......-...++.. ... .+ ..+..+++|+.+|.+...|+++|+.+.++..
T Consensus 83 ~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 83 LSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp EEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred eccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 11000001111111 000 00 0234788999999999999999999988873
No 335
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.44 E-value=1.3 Score=39.15 Aligned_cols=154 Identities=14% Similarity=0.148 Sum_probs=79.8
Q ss_pred CccEEEEEeCC------CCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEE-EcCC--eEEEEEcCCCCcc
Q 022019 137 TSCVFASTTRD------HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA-GYNK--SVRVFDVHRPGRD 207 (304)
Q Consensus 137 ~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~-~~d~--~i~v~d~~~~~~~ 207 (304)
++.+++.|+.+ ..+.+||..+.+....-..... ..-.++..-.+++.++. |.++ .+.+||..+. .
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~----R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~--~ 524 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHT----RFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEE--I 524 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBC----CBSCEEEECTTSCEEEECCBCSSCSEEEEETTTT--E
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCC----cccceEEEEcCCEEEEECCCCCCCCEEEEECCCC--c
Confidence 56677777654 3578999988654433211111 11123333236666664 4332 7899998762 2
Q ss_pred ceeeeeeeccccccccceeEEEeecCCCcEEEEEec--C-----CeEEEEecCCce--------EeEEec-cccCCeEEE
Q 022019 208 FEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSY--S-----QTSAIYREDNME--------LLYVLH-GQEGGVTHV 271 (304)
Q Consensus 208 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~--d-----g~i~i~d~~~~~--------~~~~~~-~~~~~v~~~ 271 (304)
+...... ...........++.+....+.+++.|+. + +.+.+||+.+.. .+.... ........+
T Consensus 525 W~~~~~~-g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~ 603 (695)
T 2zwa_A 525 FKDVTPK-DEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIK 603 (695)
T ss_dssp EEECCCS-SGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEE
T ss_pred eEEccCC-CCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEE
Confidence 2211110 0011111223345666633778888876 2 458999988765 122211 111122233
Q ss_pred EECCCCcEEEEeecc--------CCeEEEEecccce
Q 022019 272 QFSRDGNYLYTGGRK--------DPYILCWDLRKAV 299 (304)
Q Consensus 272 ~~~~~~~~l~~~~~~--------d~~i~vwd~~~~~ 299 (304)
.+ .++..++.|| . ...+.+||+.+.+
T Consensus 604 ~~-~~~~iyv~GG-~~~~~~~~~~~~v~~yd~~t~~ 637 (695)
T 2zwa_A 604 YI-TPRKLLIVGG-TSPSGLFDRTNSIISLDPLSET 637 (695)
T ss_dssp EE-ETTEEEEECC-BCSSCCCCTTTSEEEEETTTTE
T ss_pred Ee-CCCEEEEECC-ccCCCCCCCCCeEEEEECCCCe
Confidence 33 3367777777 3 3458899988754
No 336
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=95.23 E-value=0.53 Score=36.61 Aligned_cols=146 Identities=12% Similarity=0.167 Sum_probs=74.5
Q ss_pred CccEEEEEeC----C-----CCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cC-----CeEEEEEc
Q 022019 137 TSCVFASTTR----D-----HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YN-----KSVRVFDV 201 (304)
Q Consensus 137 ~~~~l~~~~~----d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d-----~~i~v~d~ 201 (304)
++.+++.|+. + ..+.+||+.+.+....-..... ......+.+ +++.++.| .+ ..+.+||+
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~---r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~ 144 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVP---RNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEP 144 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSC---CBTCEEEEE--TTEEEEECCEETTEECCCEEEEET
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcC---ccccEEEEE--CCEEEEEcCCCCCcccccEEEECC
Confidence 4556666665 2 4688999987764432221111 111222333 45555543 22 46888998
Q ss_pred CCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecC-----CeEEEEecCCceE--eEEeccccCCeEEEEEC
Q 022019 202 HRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS-----QTSAIYREDNMEL--LYVLHGQEGGVTHVQFS 274 (304)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d-----g~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~ 274 (304)
.+. .......+.. . ......+.+ ++.+++.|+.+ ..+.+||+.+.+- +..+.........+.+
T Consensus 145 ~~~--~W~~~~~~p~---~-r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~- 214 (308)
T 1zgk_A 145 ERD--EWHLVAPMLT---R-RIGVGVAVL---NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL- 214 (308)
T ss_dssp TTT--EEEECCCCSS---C-CBSCEEEEE---TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-
T ss_pred CCC--eEeECCCCCc---c-ccceEEEEE---CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE-
Confidence 752 2222211111 1 111122222 45677777764 4589999876642 2222222222233333
Q ss_pred CCCcEEEEeeccC-----CeEEEEecccce
Q 022019 275 RDGNYLYTGGRKD-----PYILCWDLRKAV 299 (304)
Q Consensus 275 ~~~~~l~~~~~~d-----~~i~vwd~~~~~ 299 (304)
++..++.|| .+ ..+.+||+.+.+
T Consensus 215 -~~~iyv~GG-~~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 215 -HNCIYAAGG-YDGQDQLNSVERYDVETET 242 (308)
T ss_dssp -TTEEEEECC-BCSSSBCCCEEEEETTTTE
T ss_pred -CCEEEEEeC-CCCCCccceEEEEeCCCCc
Confidence 567777777 44 568899987754
No 337
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.22 E-value=0.59 Score=36.43 Aligned_cols=139 Identities=6% Similarity=0.021 Sum_probs=73.3
Q ss_pred CCCccEEEEEeCC--------------CCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE--cCCeEE
Q 022019 135 DPTSCVFASTTRD--------------HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG--YNKSVR 197 (304)
Q Consensus 135 ~~~~~~l~~~~~d--------------g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~--~d~~i~ 197 (304)
++++.+|.-+... ..|+..++..++... +... .+..|+++++.|+ +. .++.-.
T Consensus 61 ~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~-l~~~---------~~~~~s~~g~~Iy~~~~~~~~~~~ 130 (302)
T 3s25_A 61 NADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTV-LDPD---------PCIYASLIGNYIYYLHYDTQTATS 130 (302)
T ss_dssp EECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEE-EECS---------CEEEEEEETTEEEEEEESSSSCEE
T ss_pred EEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceE-eecC---------CccEEEEeCCEEEEEeecCCCCce
Confidence 4566666666442 457777777654332 2211 1346778888888 44 244444
Q ss_pred EEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCC
Q 022019 198 VFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDG 277 (304)
Q Consensus 198 v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~ 277 (304)
||-+...+...+ .+.. +. + ..|+|+++.++.+......|...++..+.....+.+ ... ..++|++
T Consensus 131 Iy~~~~dGs~~~---~lt~----~~--~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~---~~~-~~~~P~g 195 (302)
T 3s25_A 131 LYRIRIDGEEKK---KIKN----HY--L--FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDC---NCY-KPVVLDD 195 (302)
T ss_dssp EEEEETTSCCCE---EEES----SC--C--CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECS---CEE-EEEEEET
T ss_pred EEEEECCCCCeE---EEeC----CC--c--eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCC---Ccc-ceeeecC
Confidence 444433332222 1211 11 1 346775565555554467788888876654433332 222 2355888
Q ss_pred cEEEEeeccC-CeEEEEecccc
Q 022019 278 NYLYTGGRKD-PYILCWDLRKA 298 (304)
Q Consensus 278 ~~l~~~~~~d-~~i~vwd~~~~ 298 (304)
.+|+-....+ ..|..-++..+
T Consensus 196 ~~iy~t~~~~~~~I~~~~ldG~ 217 (302)
T 3s25_A 196 TNVYYMDVNRDNAIVHVNINNP 217 (302)
T ss_dssp TEEEEEEGGGTTEEEEECSSSC
T ss_pred CEEEEEEcCCCcEEEEEECCCC
Confidence 8887665222 35555555443
No 338
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=94.87 E-value=1.1 Score=35.08 Aligned_cols=146 Identities=12% Similarity=0.198 Sum_probs=73.4
Q ss_pred CccEEEEEeCC-------CCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-c------CCeEEEEEcC
Q 022019 137 TSCVFASTTRD-------HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-Y------NKSVRVFDVH 202 (304)
Q Consensus 137 ~~~~l~~~~~d-------g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~------d~~i~v~d~~ 202 (304)
++.+++.|+.+ ..+.+||+.+.+....-....... . .++.. .++++++.| . -..+.+||+.
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~---~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~ 183 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVY---G-HNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPK 183 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEE---S-CEEEE-ETTEEEEECCEESSSCBCCCEEEEETT
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCccc---c-cEEEE-ECCEEEEEcCCCCCCCccceEEEEcCC
Confidence 55677777653 247889988776544322211100 1 12222 345555543 2 2358899987
Q ss_pred CCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecC-----CeEEEEecCCce--EeEEeccccCCeEEEEECC
Q 022019 203 RPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS-----QTSAIYREDNME--LLYVLHGQEGGVTHVQFSR 275 (304)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d-----g~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~ 275 (304)
+. .......+.. . .... +++.. ++.+++.|+.+ ..+.+||+.+.+ .+..+.........+.+
T Consensus 184 ~~--~W~~~~~~p~---~-r~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-- 252 (318)
T 2woz_A 184 KG--DWKDLAPMKT---P-RSMF-GVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVSL-- 252 (318)
T ss_dssp TT--EEEEECCCSS---C-CBSC-EEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEEE--
T ss_pred CC--EEEECCCCCC---C-cccc-eEEEE--CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEEE--
Confidence 62 2222211111 1 1111 22222 45677777654 357789987654 33223222222233333
Q ss_pred CCcEEEEeeccC--------------CeEEEEecccce
Q 022019 276 DGNYLYTGGRKD--------------PYILCWDLRKAV 299 (304)
Q Consensus 276 ~~~~l~~~~~~d--------------~~i~vwd~~~~~ 299 (304)
+++.++.|| .+ ..+.+||+.+.+
T Consensus 253 ~~~i~v~GG-~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 289 (318)
T 2woz_A 253 AGSLYAIGG-FAMIQLESKEFAPTEVNDIWKYEDDKKE 289 (318)
T ss_dssp TTEEEEECC-BCCBC----CCBCCBCCCEEEEETTTTE
T ss_pred CCEEEEECC-eeccCCCCceeccceeeeEEEEeCCCCE
Confidence 567777776 43 357888887653
No 339
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=94.74 E-value=1.1 Score=34.84 Aligned_cols=147 Identities=12% Similarity=0.018 Sum_probs=73.5
Q ss_pred CCccEEEEEeC-----C------CCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE-cC--------Ce
Q 022019 136 PTSCVFASTTR-----D------HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YN--------KS 195 (304)
Q Consensus 136 ~~~~~l~~~~~-----d------g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d--------~~ 195 (304)
.++.+++.|+. . ..+..||..+.+....-..... .. ....+.+ +++.++.| .+ ..
T Consensus 44 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~--~~~~~~~--~~~lyv~GG~~~~~~~~~~~~ 118 (315)
T 4asc_A 44 KENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSP-RC--LFGLGEA--LNSIYVVGGREIKDGERCLDS 118 (315)
T ss_dssp TTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSC-EE--SCEEEEE--TTEEEEECCEESSTTCCBCCC
T ss_pred ECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcc-hh--ceeEEEE--CCEEEEEeCCcCCCCCcccce
Confidence 36677777773 1 1277889887765332111111 00 1112222 45555543 21 45
Q ss_pred EEEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEec-C-----CeEEEEecCCce--EeEEeccccCC
Q 022019 196 VRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSY-S-----QTSAIYREDNME--LLYVLHGQEGG 267 (304)
Q Consensus 196 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~-d-----g~i~i~d~~~~~--~~~~~~~~~~~ 267 (304)
+.+||..+. .......+... .... +++.. ++.+++.|+. + ..+.+||+.+.+ .+..+......
T Consensus 119 ~~~~d~~~~--~W~~~~~~p~~----r~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~ 189 (315)
T 4asc_A 119 VMCYDRLSF--KWGESDPLPYV----VYGH-TVLSH--MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSL 189 (315)
T ss_dssp EEEEETTTT--EEEECCCCSSC----CBSC-EEEEE--TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBS
T ss_pred EEEECCCCC--cEeECCCCCCc----ccce-eEEEE--CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhc
Confidence 889998763 22222211111 1111 22222 5567777776 2 468999988764 22222221222
Q ss_pred eEEEEECCCCcEEEEeeccCC-----eEEEEecccce
Q 022019 268 VTHVQFSRDGNYLYTGGRKDP-----YILCWDLRKAV 299 (304)
Q Consensus 268 v~~~~~~~~~~~l~~~~~~d~-----~i~vwd~~~~~ 299 (304)
...+.+ +++.++.|| .++ .+.+||+.+.+
T Consensus 190 ~~~~~~--~~~iyv~GG-~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 190 FGATVH--DGRIIVAAG-VTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp CEEEEE--TTEEEEEEE-ECSSSEEEEEEEEETTTTE
T ss_pred eEEEEE--CCEEEEEec-cCCCCccceEEEEECCCCe
Confidence 233333 567777777 443 57888887653
No 340
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=94.45 E-value=1.3 Score=34.59 Aligned_cols=147 Identities=13% Similarity=0.105 Sum_probs=71.4
Q ss_pred CCccEEEEEeC----CC-------CEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EEcC-------CeE
Q 022019 136 PTSCVFASTTR----DH-------PIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AGYN-------KSV 196 (304)
Q Consensus 136 ~~~~~l~~~~~----dg-------~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~~d-------~~i 196 (304)
.++.+++.|+. ++ .+..||..+.+....-..... . .....+.+ +++.++ .|.+ ..+
T Consensus 55 ~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r--~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~ 129 (318)
T 2woz_A 55 QQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSA-R--CLFGLGEV--DDKIYVVAGKDLQTEASLDSV 129 (318)
T ss_dssp SSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSC-B--CSCEEEEE--TTEEEEEEEEBTTTCCEEEEE
T ss_pred ECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCcc-c--cccceEEE--CCEEEEEcCccCCCCcccceE
Confidence 36677777773 12 177889887765432111111 1 01122222 455555 4432 347
Q ss_pred EEEEcCCCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEec------CCeEEEEecCCceE--eEEeccccCCe
Q 022019 197 RVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSY------SQTSAIYREDNMEL--LYVLHGQEGGV 268 (304)
Q Consensus 197 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~------dg~i~i~d~~~~~~--~~~~~~~~~~v 268 (304)
.+||+.+. .......+.....+| +++. . ++.+++.|+. -..+.+||+.+.+- +..+.......
T Consensus 130 ~~yd~~~~--~W~~~~~~p~~r~~~-----~~~~-~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~ 200 (318)
T 2woz_A 130 LCYDPVAA--KWSEVKNLPIKVYGH-----NVIS-H-NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMF 200 (318)
T ss_dssp EEEETTTT--EEEEECCCSSCEESC-----EEEE-E-TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSC
T ss_pred EEEeCCCC--CEeECCCCCCccccc-----EEEE-E-CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccc
Confidence 88888652 222222111111111 2222 2 5667777764 23589999987642 22222111222
Q ss_pred EEEEECCCCcEEEEeeccC-----CeEEEEecccce
Q 022019 269 THVQFSRDGNYLYTGGRKD-----PYILCWDLRKAV 299 (304)
Q Consensus 269 ~~~~~~~~~~~l~~~~~~d-----~~i~vwd~~~~~ 299 (304)
..+.+ +++.++.|| .+ ..+.+||+.+.+
T Consensus 201 ~~~~~--~~~iyv~GG-~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 201 GVAIH--KGKIVIAGG-VTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp EEEEE--TTEEEEEEE-EETTEEEEEEEEEETTTCC
T ss_pred eEEEE--CCEEEEEcC-cCCCCccceEEEEECCCCe
Confidence 23333 567777776 33 346788887653
No 341
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=94.11 E-value=1.7 Score=34.25 Aligned_cols=154 Identities=13% Similarity=0.086 Sum_probs=93.7
Q ss_pred CCCccEEEEEeC-------CCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCC-----cEEE-EE---cCCeEEE
Q 022019 135 DPTSCVFASTTR-------DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTG-----TKIF-AG---YNKSVRV 198 (304)
Q Consensus 135 ~~~~~~l~~~~~-------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~-----~~l~-~~---~d~~i~v 198 (304)
+++.++++..+- .|.+.+|..+.+ ..+.+++|.. .. ..+-.+| ..++ +. ..+.++|
T Consensus 160 d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa-----~F--~~~~~~g~~~~~~lf~fa~r~~~g~kLhI 231 (365)
T 2xzh_A 160 DAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAA-----SF--AQFKMEGNAEESTLFCFAVRGQAGGKLHI 231 (365)
T ss_dssp CTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEE-----EE--EEECCTTCSSCEEEEEEEEEETTEEEEEE
T ss_pred CCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceeeeeee-----ee--EEEecCCCCCCceEEEEEEecCCCcEEEE
Confidence 666776555432 367899998754 3345555432 11 2232222 2333 22 2368999
Q ss_pred EEcCCC--Cc-cce-eeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEEC
Q 022019 199 FDVHRP--GR-DFE-KYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFS 274 (304)
Q Consensus 199 ~d~~~~--~~-~~~-~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~ 274 (304)
.++..+ +. .+. ....+....+...+-..++..++ .-.++..-+.-|.|++||+.++.++..-+-....|...+-+
T Consensus 232 iEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~-kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~ 310 (365)
T 2xzh_A 232 IEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISE-KHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPH 310 (365)
T ss_dssp EECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEET-TTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE
T ss_pred EEcCCCCCCCCCcccccceeeCCccccCCceEEEEecc-cCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEeccc
Confidence 998653 11 111 11111122233445566888888 45588888999999999999999998887667777766665
Q ss_pred CCCcEEEEeeccCCeEEEEecccc
Q 022019 275 RDGNYLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 275 ~~~~~l~~~~~~d~~i~vwd~~~~ 298 (304)
....-++... ..|.|.--.++..
T Consensus 311 ~~~~Gi~~Vn-r~GqVl~v~v~~~ 333 (365)
T 2xzh_A 311 EATAGIIGVN-RKGQVLSVCVEEE 333 (365)
T ss_dssp GGGTEEEEEE-TTCEEEEEEECTT
T ss_pred CCCCcEEEEc-CCCEEEEEEECcc
Confidence 5555566666 7888777666554
No 342
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=93.43 E-value=5.7 Score=38.11 Aligned_cols=155 Identities=11% Similarity=0.063 Sum_probs=83.6
Q ss_pred CCCccEEEEEe-------CCCCEEEEEcCCCeeeEEeecccccccccceEEEEEC--CC-CcEEEEE----cCCeEEEEE
Q 022019 135 DPTSCVFASTT-------RDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFN--PT-GTKIFAG----YNKSVRVFD 200 (304)
Q Consensus 135 ~~~~~~l~~~~-------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~--~~-~~~l~~~----~d~~i~v~d 200 (304)
+++.++++..+ -.|.+.+|+.+.+. .+.+.+|.. ....+... +. ...++-+ ..+.++|.+
T Consensus 159 d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~iegha~-----~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~E 232 (1630)
T 1xi4_A 159 DAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAA-----SFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIE 232 (1630)
T ss_pred CCCCCeEEEEeeccCCCcccceeeeeeccccc-chhhhHhHh-----hhheeccCCCCCCceEEEEEEecCCCceEEEEe
Confidence 55666655443 24788999886542 233444332 11122221 11 1233312 237889988
Q ss_pred cCCC--C-ccce-eeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCC
Q 022019 201 VHRP--G-RDFE-KYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRD 276 (304)
Q Consensus 201 ~~~~--~-~~~~-~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~ 276 (304)
+..+ + ..+. ....+........+-..++..++ .-.++..-+.-|.|++||+.++.++..-+-...+|...+-++.
T Consensus 233 i~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~-k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~ 311 (1630)
T 1xi4_A 233 VGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISE-KHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEA 311 (1630)
T ss_pred cCCCccCCCCCccccccccCCcccccCcceEEEecc-ccCEEEEEecCceEEEEecccchhhhhccccCCceEEeccCCC
Confidence 8653 1 1111 00111111122234456788888 4457888899999999999999987766655555555554444
Q ss_pred CcEEEEeeccCCeEEEEeccc
Q 022019 277 GNYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 277 ~~~l~~~~~~d~~i~vwd~~~ 297 (304)
..-++... ..|.|.--.+..
T Consensus 312 ~~g~~~vn-r~G~vl~v~v~~ 331 (1630)
T 1xi4_A 312 TAGIIGVN-RKGQVLSVCVEE 331 (1630)
T ss_pred CCceEEEc-CCceEEEEEEcc
Confidence 33344455 566665555544
No 343
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=93.14 E-value=5.8 Score=37.35 Aligned_cols=150 Identities=13% Similarity=0.180 Sum_probs=86.9
Q ss_pred eeCCCccEEEEEeC-C--------CCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCC
Q 022019 133 ASDPTSCVFASTTR-D--------HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHR 203 (304)
Q Consensus 133 ~~~~~~~~l~~~~~-d--------g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~ 203 (304)
.|..+...|+++.- + ..|++.+...+.....+..... ..|...+.+. ..++.+.++.+.++.+..
T Consensus 468 gf~~~~~TL~~~~l~~~~ivQVt~~~Irli~~~~~~~~~~w~~p~~----~~I~~As~n~--~~vvva~g~~l~~fel~~ 541 (1158)
T 3ei3_A 468 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQA----KNISVASCNS--SQVVVAVGRALYYLQIHP 541 (1158)
T ss_dssp TCCSSSCEEEEEEETTTEEEEEESSCEEEEESSSCCEEEEECCTTC----CCCCEEEECS--SEEEEEETTEEEEEEEET
T ss_pred cccCCCCcEEEEEcCCCeEEEEecCEEEEEECCCCeEEEEEECCCC----CEEEEEEeCC--CEEEEEECCEEEEEEeeC
Confidence 34455566666643 1 2356666554444545543322 1455666553 355544567888888764
Q ss_pred CCccceeeeeeeccccccccceeEEEeecCC-----CcEEEEEec-CCeEEEEecCCceEeEEecc-ccCCeEEEEEC--
Q 022019 204 PGRDFEKYSTLKGNKEGQAGIMSAIAFSPTH-----TGMLAIGSY-SQTSAIYREDNMELLYVLHG-QEGGVTHVQFS-- 274 (304)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-----~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~-~~~~v~~~~~~-- 274 (304)
+ ....... ......|.|+++.|.. +.++++|.. |++|+|+++...+.+....- ......++.+.
T Consensus 542 ~--~L~~~~~-----~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~ 614 (1158)
T 3ei3_A 542 Q--ELRQISH-----TEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTF 614 (1158)
T ss_dssp T--EEEEEEE-----EECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEE
T ss_pred C--ceeeecc-----cCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEe
Confidence 2 1222111 1123458999998632 468999996 99999999987766544321 11233343332
Q ss_pred CCCcEEEEeeccCCeEEEEecc
Q 022019 275 RDGNYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 275 ~~~~~l~~~~~~d~~i~vwd~~ 296 (304)
....+|..|- .||.+.-+.+.
T Consensus 615 ~~~~~L~igl-~dG~l~~~~~d 635 (1158)
T 3ei3_A 615 ESSHYLLCAL-GDGALFYFGLN 635 (1158)
T ss_dssp TTEEEEEEEE-TTSEEEEEEEC
T ss_pred CCCcEEEEEe-CCCeEEEEEEc
Confidence 2346788887 89988766654
No 344
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=93.09 E-value=2 Score=34.07 Aligned_cols=26 Identities=8% Similarity=0.107 Sum_probs=17.3
Q ss_pred CccEEEEEeC-C---------CCEEEEEcCCCeeeE
Q 022019 137 TSCVFASTTR-D---------HPIHLWDATTGLLRC 162 (304)
Q Consensus 137 ~~~~l~~~~~-d---------g~i~i~d~~~~~~~~ 162 (304)
++.+++.|+. + ..+.+||+.+.+...
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~ 100 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVK 100 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEE
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEE
Confidence 4556666665 2 468999998876443
No 345
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=92.60 E-value=1.5 Score=36.42 Aligned_cols=112 Identities=11% Similarity=0.121 Sum_probs=55.6
Q ss_pred CccceeCCCcc-EEEEEeCCCCEEEEEcCCCe---eeEEeeccccc----ccccceEEEEECCC---CcEEEE--E--cC
Q 022019 129 PHMSASDPTSC-VFASTTRDHPIHLWDATTGL---LRCTYRAYDAV----DEITAAFSVAFNPT---GTKIFA--G--YN 193 (304)
Q Consensus 129 ~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~----~~~~~v~~i~~~~~---~~~l~~--~--~d 193 (304)
|..+++.|++. .|+++...|.|++++..... .+..+...-.. ........|+|+|+ +..|++ + .+
T Consensus 16 P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~ 95 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQE 95 (463)
T ss_dssp EEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCC
T ss_pred ceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCCC
Confidence 44455678885 45566788999999754221 11111110000 01236789999996 233332 2 12
Q ss_pred ----------CeEEEEEcCCCC-c-----cceeeeeeeccccccccceeEEEeecCCCcEEEEEec
Q 022019 194 ----------KSVRVFDVHRPG-R-----DFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSY 243 (304)
Q Consensus 194 ----------~~i~v~d~~~~~-~-----~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~ 243 (304)
..|.-|.+.... . ..+.+.........|. ...|+|.| ++.++++.+.
T Consensus 96 ~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~--g~~l~fgp-DG~LYv~~Gd 158 (463)
T 2wg3_C 96 RWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHL--GGQLLFGP-DGFLYIILGD 158 (463)
T ss_dssp SSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSC--EEEEEECT-TSCEEEEECC
T ss_pred CcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCccc--CCcEeECC-CCcEEEEeCC
Confidence 145556664321 1 1122222221223343 57899999 5555555443
No 346
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=92.11 E-value=5.9 Score=34.94 Aligned_cols=154 Identities=10% Similarity=0.100 Sum_probs=80.0
Q ss_pred CccEEEEEeCC----CCEEEEEcCCCeeeEEe-ecc--cccccccceEEEEECCCCcEEEE-EcC------CeEEEEEcC
Q 022019 137 TSCVFASTTRD----HPIHLWDATTGLLRCTY-RAY--DAVDEITAAFSVAFNPTGTKIFA-GYN------KSVRVFDVH 202 (304)
Q Consensus 137 ~~~~l~~~~~d----g~i~i~d~~~~~~~~~~-~~~--~~~~~~~~v~~i~~~~~~~~l~~-~~d------~~i~v~d~~ 202 (304)
++.+++.|+.+ ..+.+||..+++....- ... ...........+.+..+++.++. |.+ ..+.+||..
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~ 476 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMK 476 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETT
T ss_pred CCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCC
Confidence 56677777753 46889999887654432 200 00011112223333325666664 432 357888887
Q ss_pred CCCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCC--eEEEEecCCceEeEE-----eccccCCeEEEEECC
Q 022019 203 RPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQ--TSAIYREDNMELLYV-----LHGQEGGVTHVQFSR 275 (304)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg--~i~i~d~~~~~~~~~-----~~~~~~~v~~~~~~~ 275 (304)
+. .+.....+.. ..... +++.-. ++.+++.|+.++ .+.+||..+.+-... +.........+.+..
T Consensus 477 t~--~W~~~~~~p~----~R~~h-~~~~~~-~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~ 548 (695)
T 2zwa_A 477 TR--EWSMIKSLSH----TRFRH-SACSLP-DGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDP 548 (695)
T ss_dssp TT--EEEECCCCSB----CCBSC-EEEECT-TSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEET
T ss_pred CC--cEEECCCCCC----Ccccc-eEEEEc-CCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeC
Confidence 62 2222211111 11112 222223 566888887755 699999987653221 111122233455555
Q ss_pred C-CcEEEEeecc--C-----CeEEEEecccce
Q 022019 276 D-GNYLYTGGRK--D-----PYILCWDLRKAV 299 (304)
Q Consensus 276 ~-~~~l~~~~~~--d-----~~i~vwd~~~~~ 299 (304)
+ ++.++.|| . + +.+.+||+.+.+
T Consensus 549 ~~~~iyv~GG-~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 549 VSKQGIILGG-GFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp TTTEEEEECC-BCTTSSCBCCEEEEEEECTTC
T ss_pred CCCEEEEECC-cCCCCCeeeCcEEEEEccCCc
Confidence 5 66777777 4 2 468899987765
No 347
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=92.09 E-value=0.18 Score=42.59 Aligned_cols=118 Identities=11% Similarity=0.101 Sum_probs=64.6
Q ss_pred CceeEEEEcCCCCeEEEec-CCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCcc
Q 022019 61 NFLKGIKWSPDGSSFLTSS-EDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSC 139 (304)
Q Consensus 61 ~~V~~i~~s~~~~~l~s~~-~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 139 (304)
....++..+|||++++.++ .+.++.++|+............ ........... +-.-|.+.+|+++|.
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~-----~~~~~~~ae~e-------~GlGPlHt~Fd~~G~ 390 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLA-----DPRDVIVGEPE-------LGLGPLHTTFDGRGN 390 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCS-----CGGGGEEECCB-------CCSCEEEEEECSSSE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhcccc-----CcccceEeecc-------CCCcccEEEECCCCc
Confidence 4456899999999887765 5889999998732110000000 00000000011 222344456688886
Q ss_pred EEEEEeCCCCEEEEEcCCC----------eeeEEeecccccccccceEEEEECCCCcEEEE
Q 022019 140 VFASTTRDHPIHLWDATTG----------LLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA 190 (304)
Q Consensus 140 ~l~~~~~dg~i~i~d~~~~----------~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~ 190 (304)
-..+.--|..|.-|++... ..+..+..+-..+|.....+=.-.|+|++|++
T Consensus 391 aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ 451 (638)
T 3sbq_A 391 AYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVA 451 (638)
T ss_dssp EEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEE
T ss_pred eEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEE
Confidence 6677778999999999642 34445555543332211111122567777774
No 348
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=90.74 E-value=5.6 Score=32.05 Aligned_cols=146 Identities=12% Similarity=0.134 Sum_probs=80.5
Q ss_pred CEEEEEcCCC--eeeEEeecccc-cccccceEEEEEC---CC----CcEEEEE--cCCeEEEEEcCCCCccceeeeeeec
Q 022019 149 PIHLWDATTG--LLRCTYRAYDA-VDEITAAFSVAFN---PT----GTKIFAG--YNKSVRVFDVHRPGRDFEKYSTLKG 216 (304)
Q Consensus 149 ~i~i~d~~~~--~~~~~~~~~~~-~~~~~~v~~i~~~---~~----~~~l~~~--~d~~i~v~d~~~~~~~~~~~~~~~~ 216 (304)
+|.+||+.++ +.++.+..... ....+.+..+.++ |. +.+++.+ ....|.|+|+.++. ..+.......
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~-swRv~~~~~~ 202 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQD-SWNVTHPTFK 202 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTE-EEEEECGGGS
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCc-EEEEccCCCc
Confidence 5889999999 88888877533 2233467888887 32 3455544 67899999998742 2111110000
Q ss_pred c-------cccc----ccceeEEEeecCC---CcEEEEEecCC-eEEEEe---cCCce---EeEEecccc---CCeEEEE
Q 022019 217 N-------KEGQ----AGIMSAIAFSPTH---TGMLAIGSYSQ-TSAIYR---EDNME---LLYVLHGQE---GGVTHVQ 272 (304)
Q Consensus 217 ~-------~~~~----~~~v~~~~~~p~~---~~~l~~~~~dg-~i~i~d---~~~~~---~~~~~~~~~---~~v~~~~ 272 (304)
. ..+. ...+..++++|+. ++.|.-....+ .++-.. +++.. .+..+ +.. ..-..++
T Consensus 203 pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~-G~kg~~s~~~~~~ 281 (381)
T 3q6k_A 203 AERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELL-GNRGKYNDAIALA 281 (381)
T ss_dssp CCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEE-EECCTTCCEEEEE
T ss_pred cccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEe-eecCCCCCcceEE
Confidence 0 0011 2357788898851 33343333322 333332 12211 11111 222 2334567
Q ss_pred EC-CCCcEEEEeeccCCeEEEEeccc
Q 022019 273 FS-RDGNYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 273 ~~-~~~~~l~~~~~~d~~i~vwd~~~ 297 (304)
.. .+|...++-- ..+.|..|+..+
T Consensus 282 ~D~~~G~ly~~~~-~~~aI~~w~~~~ 306 (381)
T 3q6k_A 282 YDPKTKVIFFAEA-NTKQVSCWNTQK 306 (381)
T ss_dssp ECTTTCEEEEEES-SSSEEEEEETTS
T ss_pred EeCCCCeEEEEec-cCCeEEEEeCCC
Confidence 75 5676666665 888999999875
No 349
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=90.28 E-value=5.3 Score=31.02 Aligned_cols=134 Identities=8% Similarity=0.119 Sum_probs=68.9
Q ss_pred CCCccEEEEEeC-CCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEE-EE-cC-CeEEEEEcCCCCcccee
Q 022019 135 DPTSCVFASTTR-DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YN-KSVRVFDVHRPGRDFEK 210 (304)
Q Consensus 135 ~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d-~~i~v~d~~~~~~~~~~ 210 (304)
+++++.|.-.+. ...|...++..+.....+.. .. ...++|++..|+ +. .+ ..|..-++.... .
T Consensus 153 ~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~--------~~-~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~--~-- 219 (302)
T 3s25_A 153 NTSDRYFYYNNPKNGQLYRYDTASQSEALFYDC--------NC-YKPVVLDDTNVYYMDVNRDNAIVHVNINNPN--P-- 219 (302)
T ss_dssp EEETTEEEEECTTTCCEEEEETTTTEEEEEECS--------CE-EEEEEEETTEEEEEEGGGTTEEEEECSSSCC--C--
T ss_pred eEECCEEEEEeCCCceEEEEECCCCCEEEEeCC--------Cc-cceeeecCCEEEEEEcCCCcEEEEEECCCCC--e--
Confidence 557777776654 57888888876654433321 11 223569888888 55 33 356666665422 1
Q ss_pred eeeeeccccccccceeEEEeecCCCcEEEEE-ecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCe
Q 022019 211 YSTLKGNKEGQAGIMSAIAFSPTHTGMLAIG-SYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPY 289 (304)
Q Consensus 211 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~ 289 (304)
..+.. ..+ ..|+|++..++.+. ...+.|..-++..........+ .+.. +++.+.+|+-.....+.
T Consensus 220 -~~Lt~------~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~~r~~l~~~---~~~~--i~i~~d~Iy~td~~~~~ 285 (302)
T 3s25_A 220 -VVLTE------ANI--EHYNVYGSLIFYQRGGDNPALCVVKNDGTGFKELAKG---EFCN--INVTSQYVYFTDFVSNK 285 (302)
T ss_dssp -EECSC------SCE--EEEEEETTEEEEEECSSSCEEEEEETTSCCCEEEEES---CEEE--EEECSSEEEEEETTTCC
T ss_pred -EEEeC------CCc--ceEEECCCEEEEEECCCCcEEEEEECCCCccEEeeCC---ccce--EEEeCCEEEEEECCCCe
Confidence 11111 112 34778444444332 2345677777754332222222 2333 44466777766534455
Q ss_pred EEEEec
Q 022019 290 ILCWDL 295 (304)
Q Consensus 290 i~vwd~ 295 (304)
|..-++
T Consensus 286 i~~~~~ 291 (302)
T 3s25_A 286 EYCTST 291 (302)
T ss_dssp EEEEES
T ss_pred EEEEEC
Confidence 554443
No 350
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=90.18 E-value=5.8 Score=36.47 Aligned_cols=32 Identities=19% Similarity=0.049 Sum_probs=27.4
Q ss_pred CCCccEEEEEeCCCCEEEEEcCCCeeeEEeec
Q 022019 135 DPTSCVFASTTRDHPIHLWDATTGLLRCTYRA 166 (304)
Q Consensus 135 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 166 (304)
.++..++++.+.|+++++|++.+++++.+...
T Consensus 244 ~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL 275 (950)
T 4gq2_M 244 LSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 275 (950)
T ss_dssp ETTTTEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred cCCCcEEEEEECCCEEEEEECCCCCeEeeecc
Confidence 45667899999999999999999998887654
No 351
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=89.47 E-value=1.7 Score=39.94 Aligned_cols=38 Identities=16% Similarity=0.193 Sum_probs=31.6
Q ss_pred CceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCcccc
Q 022019 61 NFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDV 98 (304)
Q Consensus 61 ~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~ 98 (304)
..|.++...++..+++|-+.|+++|+|++.++.+....
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 45777888888889999999999999999988765443
No 352
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=88.04 E-value=8.4 Score=30.33 Aligned_cols=152 Identities=9% Similarity=0.015 Sum_probs=80.3
Q ss_pred CccEEEEEeCCCCEEEEEcCCCee-----eEEeecccccccccceEEE-EECCCCcEEEEEcCCeEEEEEcC--CC---C
Q 022019 137 TSCVFASTTRDHPIHLWDATTGLL-----RCTYRAYDAVDEITAAFSV-AFNPTGTKIFAGYNKSVRVFDVH--RP---G 205 (304)
Q Consensus 137 ~~~~l~~~~~dg~i~i~d~~~~~~-----~~~~~~~~~~~~~~~v~~i-~~~~~~~~l~~~~d~~i~v~d~~--~~---~ 205 (304)
+...++.++.+|.++--.+..-.. ...+.... ...+..+ ..+.+...++.+..|.+..+... .- +
T Consensus 108 ~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke----~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~g 183 (327)
T 3uc1_A 108 DAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD----NDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMG 183 (327)
T ss_dssp SSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT----TCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCC
T ss_pred CCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC----CCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCC
Confidence 466899999999999888754211 11111111 1133333 34444455557889998888776 21 1
Q ss_pred ccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCc-------eEeEEec--cccCCeEEEEECCC
Q 022019 206 RDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM-------ELLYVLH--GQEGGVTHVQFSRD 276 (304)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~-------~~~~~~~--~~~~~v~~~~~~~~ 276 (304)
+...-...+ .+ .....|.++...+ ....++..+..|.++.-.+... +-+..++ .-.+.+..+....+
T Consensus 184 r~a~Gv~~i--~L-~~~d~Vv~~~~~~-~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~ 259 (327)
T 3uc1_A 184 RATSGVQGM--RF-NIDDRLLSLNVVR-EGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDD 259 (327)
T ss_dssp TTSBCEESS--CC-CTTCCEEEEEECC-TTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECT
T ss_pred cCCCCeeee--cC-CCCCEEEEEEEEC-CCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCC
Confidence 111111101 11 1233465655554 4457888999999988875422 1122222 21334555444334
Q ss_pred CcEEEEeeccCCeEEEEeccc
Q 022019 277 GNYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 277 ~~~l~~~~~~d~~i~vwd~~~ 297 (304)
...++..+ .+|.+.-++...
T Consensus 260 ~~~i~l~T-~~G~~ir~~~~~ 279 (327)
T 3uc1_A 260 DSELYAVT-SGGGVIRTAARQ 279 (327)
T ss_dssp TCEEEEEE-GGGCEEEEEGGG
T ss_pred CccEEEEc-CCCeEEEEehhh
Confidence 44555556 677777776543
No 353
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=85.56 E-value=10 Score=28.93 Aligned_cols=151 Identities=9% Similarity=-0.033 Sum_probs=80.8
Q ss_pred CccEEEEEeCCCCEEEEEcCCCe----eeEEeecccccccccceEEEEECCCC-cEEEEEcCCeEEEEEcCCCCc---cc
Q 022019 137 TSCVFASTTRDHPIHLWDATTGL----LRCTYRAYDAVDEITAAFSVAFNPTG-TKIFAGYNKSVRVFDVHRPGR---DF 208 (304)
Q Consensus 137 ~~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~~~~~~v~~i~~~~~~-~~l~~~~d~~i~v~d~~~~~~---~~ 208 (304)
+...++.++.+|.++-..+..-. -...+.. .....+..+...... ..++.+..|.+..+....-.. ..
T Consensus 79 ~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~l----kegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a 154 (276)
T 3no0_A 79 FGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKL----TEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGA 154 (276)
T ss_dssp SCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCC----CTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTC
T ss_pred CCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEec----CCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCC
Confidence 34578889999999998875432 0111111 111244455444444 444477999988887643211 10
Q ss_pred eeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCC-------ceEeEEeccccCCeEEEEECCCCcEEE
Q 022019 209 EKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN-------MELLYVLHGQEGGVTHVQFSRDGNYLY 281 (304)
Q Consensus 209 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~ 281 (304)
.-...+ .+. ....|.++...+ +...++..+..|.++...+.. ++-+..+ ...+.+..+....+...++
T Consensus 155 ~Gv~~i--~L~-~~d~vv~~~~~~-~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~~~~i~ 229 (276)
T 3no0_A 155 RGVQGI--KLE-KNDETSGLRIWN-GEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKEEVELL 229 (276)
T ss_dssp CCEECC--CCC-TTCCEEEEEEES-SCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESSEEEEE
T ss_pred CCEEEE--ccC-CCCEEEEEEEeC-CCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCCCCEEE
Confidence 111111 111 123455555444 345788889999998887642 2223333 2234455544333334566
Q ss_pred EeeccCCeEEE--Eeccc
Q 022019 282 TGGRKDPYILC--WDLRK 297 (304)
Q Consensus 282 ~~~~~d~~i~v--wd~~~ 297 (304)
..+ .+|.+.. +++..
T Consensus 230 ~~t-~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 230 ITT-KNGKAFYDKINQKD 246 (276)
T ss_dssp EEE-TTSCEEEEEEEGGG
T ss_pred EEc-CCCeEEEeeeCHHH
Confidence 666 6888777 76654
No 354
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=83.20 E-value=16 Score=29.30 Aligned_cols=106 Identities=8% Similarity=-0.039 Sum_probs=51.9
Q ss_pred EEEEEeCCCCEEEEEcCC-CeeeEEeecccccccccceEEEEECC--CCcEEEEEcCC----eEEEEEcCCCCccceeee
Q 022019 140 VFASTTRDHPIHLWDATT-GLLRCTYRAYDAVDEITAAFSVAFNP--TGTKIFAGYNK----SVRVFDVHRPGRDFEKYS 212 (304)
Q Consensus 140 ~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~~~v~~i~~~~--~~~~l~~~~d~----~i~v~d~~~~~~~~~~~~ 212 (304)
.|.+|...| +.+++-.. +..-...... .....|.+|.++| .+..++++..+ .|.. ....+..+..+.
T Consensus 24 ~l~vgt~~G-l~~~~~~~~g~~W~~~~~~---~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~--s~D~G~tW~~~~ 97 (394)
T 3b7f_A 24 MLLVATIKG-AWFLASDPARRTWELRGPV---FLGHTIHHIVQDPREPERMLMAARTGHLGPTVFR--SDDGGGNWTEAT 97 (394)
T ss_dssp EEEEEETTE-EEEEEECTTSCSEEEEEEE---STTSEEEEEEECSSSTTCEEEEEEC--CCEEEEE--ESSTTSCCEECS
T ss_pred EEEEEecCc-eEEEECCCCCCCceECCcc---CCCCceEEEEECCCCCCeEEEEecCCCCCccEEE--eCCCCCCceECC
Confidence 566677777 65665433 2222111110 0112789999999 55566555544 3433 333344433322
Q ss_pred eeeccccc-------cccceeEEEeecCC-CcEEEEEecCCeEEEEe
Q 022019 213 TLKGNKEG-------QAGIMSAIAFSPTH-TGMLAIGSYSQTSAIYR 251 (304)
Q Consensus 213 ~~~~~~~~-------~~~~v~~~~~~p~~-~~~l~~~~~dg~i~i~d 251 (304)
........ ....|.++++.|.+ ...+.+++..+.|...+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~ 144 (394)
T 3b7f_A 98 RPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRST 144 (394)
T ss_dssp BCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEES
T ss_pred ccccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEc
Confidence 11000000 11247788998743 44566666667665553
No 355
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=81.21 E-value=37 Score=32.08 Aligned_cols=104 Identities=11% Similarity=0.045 Sum_probs=59.7
Q ss_pred ccEEEEEeCCCCEEEEEcCCCeeeEEeecccccccccceEEEEECCC------CcEEEEE--cCCeEEEEEcCCCCccce
Q 022019 138 SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPT------GTKIFAG--YNKSVRVFDVHRPGRDFE 209 (304)
Q Consensus 138 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~------~~~l~~~--~d~~i~v~d~~~~~~~~~ 209 (304)
+..++.++ ++.+.++.+..++.....+. .-...|.|+++.|. +.++++| .|++++|+++..... .
T Consensus 523 ~~~vvva~-g~~l~~fel~~~~L~~~~~~----~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~-~- 595 (1158)
T 3ei3_A 523 SSQVVVAV-GRALYYLQIHPQELRQISHT----EMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFEL-L- 595 (1158)
T ss_dssp SSEEEEEE-TTEEEEEEEETTEEEEEEEE----ECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCE-E-
T ss_pred CCEEEEEE-CCEEEEEEeeCCceeeeccc----CCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCe-E-
Confidence 34565554 67788888876643322111 11237899999864 3678876 499999999974211 1
Q ss_pred eeeeeeccccccccceeEEEeec-CCCcEEEEEecCCeEEEEecC
Q 022019 210 KYSTLKGNKEGQAGIMSAIAFSP-THTGMLAIGSYSQTSAIYRED 253 (304)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~~~~~p-~~~~~l~~~~~dg~i~i~d~~ 253 (304)
....+ . ......++.+.. .+..+|.+|-.||.+.-+.+.
T Consensus 596 ~~~~L----~-~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d 635 (1158)
T 3ei3_A 596 HKEML----G-GEIIPRSILMTTFESSHYLLCALGDGALFYFGLN 635 (1158)
T ss_dssp EEEEC----C-SSCCEEEEEEEEETTEEEEEEEETTSEEEEEEEC
T ss_pred EEEEC----C-CCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEc
Confidence 11111 1 111233343321 145688899999997665543
No 356
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=80.23 E-value=7.1 Score=33.58 Aligned_cols=60 Identities=20% Similarity=0.254 Sum_probs=39.4
Q ss_pred cCccceeCCCccEEEEEeCC------------CCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE
Q 022019 128 FPHMSASDPTSCVFASTTRD------------HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG 191 (304)
Q Consensus 128 ~~~~~~~~~~~~~l~~~~~d------------g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~ 191 (304)
.|.-+.|+|.|++++.-..+ ..+.+.+..+++....+..+.. ..++.+.|+||++.|++.
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~g----aE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIG----CEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTT----CEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCC----ccCcCeeECCCCCEEEEE
Confidence 34556778899866654332 1345556667776665554432 388999999999888753
No 357
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=79.89 E-value=41 Score=31.73 Aligned_cols=35 Identities=20% Similarity=0.059 Sum_probs=29.1
Q ss_pred CeEEEEECCCCcEEEEeeccCCeEEEEecccceeee
Q 022019 267 GVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVV 302 (304)
Q Consensus 267 ~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~~ 302 (304)
.+.+++..++..+|++-+ .|+++++|++.+++++.
T Consensus 239 ~~vs~~~~~~~~~lftL~-~D~~LRiWsl~t~~~v~ 273 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLS-LDYKLKVLDLSTNQCVE 273 (1139)
T ss_dssp CBSCCEEETTTTEEEEEB-TTCEEEEEETTTTEEEE
T ss_pred eeEEeeccCCccEEEEEe-CCCEEEEEECCCCCeEE
Confidence 345556667889999999 99999999999998764
No 358
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=79.33 E-value=34 Score=30.41 Aligned_cols=216 Identities=10% Similarity=0.047 Sum_probs=109.9
Q ss_pred CceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccE
Q 022019 61 NFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCV 140 (304)
Q Consensus 61 ~~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 140 (304)
..|.++.-..+|.+-+ |+.+| +..++..++.... ...... ...... .....|.++.- +.+|++
T Consensus 324 ~~v~~i~~D~~g~lWi-Gt~~G-l~~~~~~~~~~~~-~~~~~~-~~~~~~------l~~~~v~~i~~-------d~~g~l 386 (758)
T 3ott_A 324 NQFYSLFRDSKGFYWF-GGANG-LIRFTDPAGERHD-AIWYRM-GDKTYP------LSHNRIRHIYE-------DKEQQL 386 (758)
T ss_dssp CBEEEEEECTTCCEEE-EETTE-EEEESCTTSSCCC-CEEECT-TCSSSC------CSCSCEEEEEE-------CTTSCE
T ss_pred ceEEEEEEcCCCCEEE-eeCCc-ceeecccccccce-eEEecc-CCcCCC------CCCCceEEEEE-------CCCCCE
Confidence 4688888887776544 44455 5566654321100 000000 000000 01134555543 445654
Q ss_pred EEEEeCCCCEEEEEcCCCeeeEEeeccc-ccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCC----Cccceeeeeee
Q 022019 141 FASTTRDHPIHLWDATTGLLRCTYRAYD-AVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRP----GRDFEKYSTLK 215 (304)
Q Consensus 141 l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~----~~~~~~~~~~~ 215 (304)
.+ |+.. -+..||..+++......... .......|.++..++++.+.+++..+.+.++|.... ...+.......
T Consensus 387 Wi-gt~~-GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~ 464 (758)
T 3ott_A 387 WI-ATDG-SINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWISTCLGGIFVVDKHKLMQSTSGQYIAEQNYS 464 (758)
T ss_dssp EE-EETT-EEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEEEESSSCEEEEEHHHHHHCCSSEEECSEEEC
T ss_pred EE-EeCC-cHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEEEECCCceEEEccccccccCCcceecccccc
Confidence 44 4444 59999988776543221111 000123688898888887776666677888986420 00010000100
Q ss_pred ccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEec-c--ccCCeEEEEECCCCcEEEEeeccCCeEEE
Q 022019 216 GNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH-G--QEGGVTHVQFSRDGNYLYTGGRKDPYILC 292 (304)
Q Consensus 216 ~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~--~~~~v~~~~~~~~~~~l~~~~~~d~~i~v 292 (304)
....-....|.++...+ .+.+.+.++..+-|..+|..+++...... . ....+.++....+|...+ |+ .+| |..
T Consensus 465 ~~~~l~~~~i~~i~~d~-~g~lWi~~~t~~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWi-gt-~~G-l~~ 540 (758)
T 3ott_A 465 VHNGLSGMFINQIIPDN-EGNVWVLLYNNKGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWV-GF-HGG-VMR 540 (758)
T ss_dssp GGGTCSCSCEEEEEECT-TSCEEEEETTCSSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEE-EE-TTE-EEE
T ss_pred cccccccceeeeEEEcC-CCCEEEEccCCCCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEE-Ee-cCc-eEE
Confidence 00011123488888888 55555433334558888987765433221 1 124678888888887554 44 444 778
Q ss_pred Eecccce
Q 022019 293 WDLRKAV 299 (304)
Q Consensus 293 wd~~~~~ 299 (304)
++..+++
T Consensus 541 ~~~~~~~ 547 (758)
T 3ott_A 541 INPKDES 547 (758)
T ss_dssp ECC--CC
T ss_pred EecCCCc
Confidence 8876553
No 359
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=78.70 E-value=9.6 Score=32.80 Aligned_cols=59 Identities=17% Similarity=0.188 Sum_probs=39.2
Q ss_pred eeEEEeecCCCcEEEEEec------------CCeEEEEecCCceEeEEeccc-cCCeEEEEECCCCcEEEEee
Q 022019 225 MSAIAFSPTHTGMLAIGSY------------SQTSAIYREDNMELLYVLHGQ-EGGVTHVQFSRDGNYLYTGG 284 (304)
Q Consensus 225 v~~~~~~p~~~~~l~~~~~------------dg~i~i~d~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~ 284 (304)
.-.|+|+| .+.++++-.. +..+.+.+..+++...-+.++ ...++.++|+||++.|+..-
T Consensus 478 PDNL~fd~-~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 478 PDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEEECT-TCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CcceEECC-CCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEE
Confidence 45689999 5554443221 124666677777665555544 35799999999999988764
No 360
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=78.43 E-value=46 Score=31.43 Aligned_cols=37 Identities=8% Similarity=0.099 Sum_probs=29.8
Q ss_pred eeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEec
Q 022019 225 MSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH 262 (304)
Q Consensus 225 v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 262 (304)
+.+++..+ +..++++-+.|+++|+|++.+++++.+..
T Consensus 240 ~vs~~~~~-~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 240 IISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp BSCCEEET-TTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eEEeeccC-CccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 44555666 66799999999999999999998877743
No 361
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=78.09 E-value=9.6 Score=32.59 Aligned_cols=59 Identities=19% Similarity=0.260 Sum_probs=37.7
Q ss_pred CccceeCCCccEEEEEeC------------CCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEE
Q 022019 129 PHMSASDPTSCVFASTTR------------DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG 191 (304)
Q Consensus 129 ~~~~~~~~~~~~l~~~~~------------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~ 191 (304)
|..+.|+++|.+.+.... ...+..++..+++....+..... ..++.++|+||++.|++.
T Consensus 478 PDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~----aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIG----CEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTT----CEEEEEEECTTSSEEEEE
T ss_pred CCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCC----ccccCCEECCCCCEEEEE
Confidence 444566888887774322 11466666667776555543221 268999999999988854
No 362
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=77.87 E-value=26 Score=28.26 Aligned_cols=136 Identities=10% Similarity=0.106 Sum_probs=73.7
Q ss_pred CCCCEEEEEcCCCeeeEEeecccccc-------------cccceEEEEECCC----CcEEE-EE-cCCeEEEEEc---CC
Q 022019 146 RDHPIHLWDATTGLLRCTYRAYDAVD-------------EITAAFSVAFNPT----GTKIF-AG-YNKSVRVFDV---HR 203 (304)
Q Consensus 146 ~dg~i~i~d~~~~~~~~~~~~~~~~~-------------~~~~v~~i~~~~~----~~~l~-~~-~d~~i~v~d~---~~ 203 (304)
..+-|.++|+.+++..+.....-... -...+..|+++|+ ++.|+ .. ....++--.. +.
T Consensus 179 ~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~ 258 (381)
T 3q6k_A 179 LRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQ 258 (381)
T ss_dssp TTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSS
T ss_pred CCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhC
Confidence 46679999999987766542111000 0237889999998 77777 33 3334443332 21
Q ss_pred CCccceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCC-c---eEeEEec--cccCCeEEEEECCCC
Q 022019 204 PGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN-M---ELLYVLH--GQEGGVTHVQFSRDG 277 (304)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~-~---~~~~~~~--~~~~~v~~~~~~~~~ 277 (304)
.. ....+..+ .. .+....-..+++++..+.++++--..+.|..|+... . .....+. ..-.....+.+.++|
T Consensus 259 ~~-~~~~v~~~-G~-kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g 335 (381)
T 3q6k_A 259 KG-GKLNPELL-GN-RGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKG 335 (381)
T ss_dssp TT-CCCCCEEE-EE-CCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTS
T ss_pred cc-hhhceEEe-ee-cCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCC
Confidence 11 01111111 10 111122335667643677777777889999999875 1 1112221 122357888888888
Q ss_pred cEEEEee
Q 022019 278 NYLYTGG 284 (304)
Q Consensus 278 ~~l~~~~ 284 (304)
..-+.++
T Consensus 336 ~Lwv~sn 342 (381)
T 3q6k_A 336 GLWFMSN 342 (381)
T ss_dssp CEEEEEC
T ss_pred eEEEEEC
Confidence 7555544
No 363
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=72.21 E-value=32 Score=26.67 Aligned_cols=155 Identities=8% Similarity=-0.023 Sum_probs=77.9
Q ss_pred CccEEEEEeCCCCEEEEEcCCCe-----eeEEeecccccccccceEEE-EECCCCcEEEEEcCCeEEEEEcCCCCcccee
Q 022019 137 TSCVFASTTRDHPIHLWDATTGL-----LRCTYRAYDAVDEITAAFSV-AFNPTGTKIFAGYNKSVRVFDVHRPGRDFEK 210 (304)
Q Consensus 137 ~~~~l~~~~~dg~i~i~d~~~~~-----~~~~~~~~~~~~~~~~v~~i-~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~ 210 (304)
+..+++.++..|.++--.+..-. -...+.... . ..+..+ ..+.+...++.+.+|.+..+....-......
T Consensus 108 ~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~---~-d~lv~~~~~~~~~~i~l~T~~G~~irf~~~~v~~~gr~ 183 (307)
T 1zi0_A 108 EGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVD---G-DELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCN 183 (307)
T ss_dssp TTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCT---T-CCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTT
T ss_pred CCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECC---C-CEEEEEEEeCCCCEEEEECCCCcEEEEEHHHcCccCCC
Confidence 34568888999999988774211 111111111 1 133333 3344455555788999888877431110000
Q ss_pred eeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCc---------eEeEEeccccCCeEEEEECCCCcEEE
Q 022019 211 YSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM---------ELLYVLHGQEGGVTHVQFSRDGNYLY 281 (304)
Q Consensus 211 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~---------~~~~~~~~~~~~v~~~~~~~~~~~l~ 281 (304)
-.-...........|.++...+ +...+++.+..|.++-.++... .....+....+.+..+....+...|+
T Consensus 184 a~Gv~~i~L~~~d~Vv~~~~~~-~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG~~~~~~~~~~~~lv~~~~v~~~~~l~ 262 (307)
T 1zi0_A 184 TTGVRGIRLGEGDKVVSLIVPR-GDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIM 262 (307)
T ss_dssp CCCEECCCCCTTCCEEEEECCC-SSCEEEEEETTSEEEEECGGGSCCCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEE
T ss_pred CCCeEeEEeCCCCEEEEEEEec-CCCEEEEEEcCCceEEEEHHHhccCCCCCCCEEeeEecCCCCeEEEEEEeCCCceEE
Confidence 0000000011233455555444 3446888899999988876321 11222332234555544433334444
Q ss_pred EeeccCCeEEEEeccc
Q 022019 282 TGGRKDPYILCWDLRK 297 (304)
Q Consensus 282 ~~~~~d~~i~vwd~~~ 297 (304)
..+ .+|.+.-+.+..
T Consensus 263 ~~t-~~g~~ir~~~~~ 277 (307)
T 1zi0_A 263 MIT-DAGTLVRTRVSE 277 (307)
T ss_dssp EEE-SSCCEEEEEGGG
T ss_pred EEc-CCCcEEEEeccc
Confidence 555 577766666544
No 364
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=71.51 E-value=23 Score=30.34 Aligned_cols=60 Identities=17% Similarity=0.169 Sum_probs=40.5
Q ss_pred ceeEEEeecCCCcEEE-EEec-----------CCeEEEEecCCceEeEEeccc-cCCeEEEEECCCCcEEEEee
Q 022019 224 IMSAIAFSPTHTGMLA-IGSY-----------SQTSAIYREDNMELLYVLHGQ-EGGVTHVQFSRDGNYLYTGG 284 (304)
Q Consensus 224 ~v~~~~~~p~~~~~l~-~~~~-----------dg~i~i~d~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~ 284 (304)
....|.|++ .+.+.+ +=.. ...+..++..+++....+.+. ...++.++|+||++.|+++-
T Consensus 477 sPDnL~fd~-~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECT-TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECC-CCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 356799999 555555 3111 225777777777765555443 34689999999999998765
No 365
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=69.99 E-value=36 Score=26.37 Aligned_cols=156 Identities=10% Similarity=-0.035 Sum_probs=76.1
Q ss_pred CccEEEEEeCCCCEEEEEcCCCeeeEE----eecccccccccce-EEEEECCCCcEEEEEcCCeEEEEEcC---CCCccc
Q 022019 137 TSCVFASTTRDHPIHLWDATTGLLRCT----YRAYDAVDEITAA-FSVAFNPTGTKIFAGYNKSVRVFDVH---RPGRDF 208 (304)
Q Consensus 137 ~~~~l~~~~~dg~i~i~d~~~~~~~~~----~~~~~~~~~~~~v-~~i~~~~~~~~l~~~~d~~i~v~d~~---~~~~~~ 208 (304)
+...+++.+.+|.|+--.+..-+.... ..... ......+ ..+..+.....++.+..|.++-+... ..+...
T Consensus 2 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~-~ke~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a 80 (307)
T 1zi0_A 2 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAAR-IKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGA 80 (307)
T ss_dssp CCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSS
T ss_pred CCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeee-eCCCCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCC
Confidence 445788889999998777654221110 00000 0011133 33334444555557788887666553 221110
Q ss_pred ee--eeeeeccccccccceeEEEeec--CCCcEEEEEecCCeEEEEecCC-------ceEeEEeccccCCeEEEEECCCC
Q 022019 209 EK--YSTLKGNKEGQAGIMSAIAFSP--THTGMLAIGSYSQTSAIYREDN-------MELLYVLHGQEGGVTHVQFSRDG 277 (304)
Q Consensus 209 ~~--~~~~~~~~~~~~~~v~~~~~~p--~~~~~l~~~~~dg~i~i~d~~~-------~~~~~~~~~~~~~v~~~~~~~~~ 277 (304)
.- +..... .. ....|.++..-+ ....+++..+.+|.++--.+.. +.....+..+ ..+..+......
T Consensus 81 ~G~~i~~~l~-l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~ 157 (307)
T 1zi0_A 81 RGRPIVNLLP-LE-QDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGE 157 (307)
T ss_dssp CCEEGGGTSC-CC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTT
T ss_pred CCeEhhhccC-CC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCC
Confidence 00 000101 11 223354443321 1345788899999999987642 2222233333 455555544444
Q ss_pred cEEEEeeccCCeEEEEeccc
Q 022019 278 NYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 278 ~~l~~~~~~d~~i~vwd~~~ 297 (304)
..|+..+ .+|.+..++...
T Consensus 158 ~~i~l~T-~~G~~irf~~~~ 176 (307)
T 1zi0_A 158 DEVMLFS-AEGKVVRFKESS 176 (307)
T ss_dssp CEEEEEE-TTSEEEEEEGGG
T ss_pred CEEEEEC-CCCcEEEEEHHH
Confidence 5566666 788888777654
No 366
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=68.03 E-value=8.3 Score=33.95 Aligned_cols=33 Identities=18% Similarity=0.281 Sum_probs=26.8
Q ss_pred CeEEEEECCCCcEEEEeeccCCeEEEEecccceeee
Q 022019 267 GVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVV 302 (304)
Q Consensus 267 ~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~~~~~~~ 302 (304)
.|.++.+ +..+|++-+ .|.++|+|++++++++.
T Consensus 223 ~Is~~~~--~~~fLftL~-~Dh~LRiWsL~t~~lv~ 255 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLT-QNCHLKIWDLTSFTLIQ 255 (729)
T ss_dssp EEEEEEE--TTTEEEEEE-TTCEEEEEETTTTEEEE
T ss_pred eEEEecc--CCcEEEEEE-cCCeEEEEEcCCCceEE
Confidence 4555555 367999999 99999999999998764
No 367
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=67.18 E-value=13 Score=32.68 Aligned_cols=30 Identities=20% Similarity=0.298 Sum_probs=26.6
Q ss_pred CccEEEEEeCCCCEEEEEcCCCeeeEEeec
Q 022019 137 TSCVFASTTRDHPIHLWDATTGLLRCTYRA 166 (304)
Q Consensus 137 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 166 (304)
+..++++.+.|.++++|++++++++.+...
T Consensus 230 ~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 230 HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 466899999999999999999998877766
No 368
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=63.78 E-value=50 Score=25.67 Aligned_cols=108 Identities=13% Similarity=0.025 Sum_probs=58.8
Q ss_pred ccEEEEEeCCCCEEEEEcCCCe-----eeEEeecccccccccceEEEEE-CCCCcEEEEEcCCeEEEEEcCCC---Cccc
Q 022019 138 SCVFASTTRDHPIHLWDATTGL-----LRCTYRAYDAVDEITAAFSVAF-NPTGTKIFAGYNKSVRVFDVHRP---GRDF 208 (304)
Q Consensus 138 ~~~l~~~~~dg~i~i~d~~~~~-----~~~~~~~~~~~~~~~~v~~i~~-~~~~~~l~~~~d~~i~v~d~~~~---~~~~ 208 (304)
...++..+..|.++-..+..-. -...+.... ...+..+.. +++...++++.+|.+..+....- ++..
T Consensus 114 ~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~----~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~ 189 (312)
T 1suu_A 114 DAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND----KDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGT 189 (312)
T ss_dssp TCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT----TCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTB
T ss_pred CCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC----CCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCC
Confidence 4567788899999888774321 111111111 123444433 44555556789999999987541 1111
Q ss_pred eeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecC
Q 022019 209 EKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED 253 (304)
Q Consensus 209 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~ 253 (304)
.-...+. .. ....+.++..-+ .+..+++.+..|..+..++.
T Consensus 190 ~Gv~~i~--L~-~~d~vv~~~~v~-~~~~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 190 QGVCGMK--LK-EGDLFVKVLSVK-ENPYLLIVSENGYGKRLNMS 230 (312)
T ss_dssp CCEECCC--CC-TTCCEEEEEECT-TCSEEEEEETTSEEEEEEGG
T ss_pred CCeEeEE--eC-CCCEEEEEEEEC-CCCeEEEEECCCceEEEEHH
Confidence 1111111 11 133455554444 34467788999999988874
No 369
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=63.15 E-value=57 Score=26.14 Aligned_cols=62 Identities=8% Similarity=-0.034 Sum_probs=35.6
Q ss_pred CccEEEEEeCCCCEEEEEcCCCee-----eEEeecccccccccceEE-EEECCCCcEEEEEcCCeEEEEEcC
Q 022019 137 TSCVFASTTRDHPIHLWDATTGLL-----RCTYRAYDAVDEITAAFS-VAFNPTGTKIFAGYNKSVRVFDVH 202 (304)
Q Consensus 137 ~~~~l~~~~~dg~i~i~d~~~~~~-----~~~~~~~~~~~~~~~v~~-i~~~~~~~~l~~~~d~~i~v~d~~ 202 (304)
+..+|+.++..|.++-..+..-.. ...+.... ...+.. ...+.+...++.+.+|.+..|...
T Consensus 112 ~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~----~d~lv~v~~~~~~~~i~l~T~~G~~irf~~~ 179 (370)
T 3l6v_A 112 DNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE----GDALVGVALTDGDRDVLLFASNGKTVRFGES 179 (370)
T ss_dssp TTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT----TCCEEEEEEECSCCEEEEEETTSEEEEEEGG
T ss_pred CCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC----CCEEEEEEEeCCCceEEEEeCCCeEEEEEcc
Confidence 345788999999999888643211 11111111 113333 333444455557788888888764
No 370
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=60.33 E-value=59 Score=25.42 Aligned_cols=154 Identities=8% Similarity=0.028 Sum_probs=77.1
Q ss_pred ccEEEEEeCCCCEEEEEcCCCe------eeEEeecccccccccceEEEE-ECCCCcEEEEEcCCeEEEEEcCCCCcccee
Q 022019 138 SCVFASTTRDHPIHLWDATTGL------LRCTYRAYDAVDEITAAFSVA-FNPTGTKIFAGYNKSVRVFDVHRPGRDFEK 210 (304)
Q Consensus 138 ~~~l~~~~~dg~i~i~d~~~~~------~~~~~~~~~~~~~~~~v~~i~-~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~ 210 (304)
+.+++.++..|.++-..+..-. -...+..... ..+..+. .+.+...++.+.+|.+..+....-......
T Consensus 106 ~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~----d~lv~~~~~~~~~~i~l~T~~G~~irf~~~ev~~~gR~ 181 (323)
T 1wp5_A 106 NGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKND----DQVVDVHLTDGMNELFLVTHNGYALWFDESEVSIVGVR 181 (323)
T ss_dssp SCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTT----CCEEEEEEECSCSEEEEEETTSEEEEEEGGGSCBCCSS
T ss_pred CceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCC----CEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHCcccCCC
Confidence 4578888999999998875211 1111222111 1333433 344555555789999988887531110000
Q ss_pred eeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCc-------eEeEEe---ccccCCeEEE-EECCCCcE
Q 022019 211 YSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM-------ELLYVL---HGQEGGVTHV-QFSRDGNY 279 (304)
Q Consensus 211 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~-------~~~~~~---~~~~~~v~~~-~~~~~~~~ 279 (304)
-.-...........|.++..-+.+...+++.+..|..+..++... +-+..+ +.....+..+ .+.++ ..
T Consensus 182 a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e~~~~~Rg~kGv~~~~~~~~~~~~l~~~~~v~~~-~~ 260 (323)
T 1wp5_A 182 AAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTEFEKATRAKRGVVILRELKANPHRISGFVVAQDS-DT 260 (323)
T ss_dssp CCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGGSCCCCTTSCCEECSCCCSSSCCCEEEEEEECTT-CE
T ss_pred CcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHHccccCCCCCCEECeeecCCCCceEEEEEEeCCC-Ce
Confidence 000111101123345555444423326778888998888776431 112222 2222245533 34444 44
Q ss_pred EEEeeccCCeEEEEeccc
Q 022019 280 LYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 280 l~~~~~~d~~i~vwd~~~ 297 (304)
++..+ ..|.+.-..+..
T Consensus 261 i~~it-~~g~~ir~~~~~ 277 (323)
T 1wp5_A 261 IYLQT-EKSFIETIKVGD 277 (323)
T ss_dssp EEEEE-TTSCEEEEEGGG
T ss_pred EEEEe-CCCeEEEEEhhh
Confidence 55555 677766666644
No 371
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=58.94 E-value=63 Score=25.32 Aligned_cols=168 Identities=7% Similarity=-0.027 Sum_probs=83.8
Q ss_pred CceeEE-EEcC--CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCC
Q 022019 61 NFLKGI-KWSP--DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPT 137 (304)
Q Consensus 61 ~~V~~i-~~s~--~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 137 (304)
..|..+ .... +..++++++.+|.++.-.+.+-..... .....+.+..+..+..+... + .
T Consensus 95 e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r-----------~G~~~i~lke~D~lv~~~~~------~-~ 156 (327)
T 3uc1_A 95 ERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRS-----------GGIVAVNLRDNDELVGAVLC------S-A 156 (327)
T ss_dssp CCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCS-----------SCEESCBCCTTCCEEEEEEE------C-T
T ss_pred CEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhcccc-----------CceEEEEECCCCEEEEEEEe------c-C
Confidence 445554 4442 567999999999999988764321110 01111222223333333221 2 2
Q ss_pred ccEEEEEeCCCCEEEEEcC--CC----ee---eEEeecccccccccceEEEEECCCCcEEE-EEcCCeEEEEEcCCCCcc
Q 022019 138 SCVFASTTRDHPIHLWDAT--TG----LL---RCTYRAYDAVDEITAAFSVAFNPTGTKIF-AGYNKSVRVFDVHRPGRD 207 (304)
Q Consensus 138 ~~~l~~~~~dg~i~i~d~~--~~----~~---~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~~d~~i~v~d~~~~~~~ 207 (304)
...++..+..|.+..+... .- .. ...+.. .....|.++..-+++..++ ++..|.++.-.+..-...
T Consensus 157 ~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L----~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~ 232 (327)
T 3uc1_A 157 GDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRF----NIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQ 232 (327)
T ss_dssp TCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCC----CTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBC
T ss_pred CCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecC----CCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHcccc
Confidence 3457777788888877766 21 10 111111 1122566665555454454 779999988876532111
Q ss_pred ---ceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecC
Q 022019 208 ---FEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED 253 (304)
Q Consensus 208 ---~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~ 253 (304)
..-...+. .....+.+..+.... +...++..+.+|.+.-++..
T Consensus 233 ~R~~~G~~~~~--l~~~~d~lv~~~~~~-~~~~i~l~T~~G~~ir~~~~ 278 (327)
T 3uc1_A 233 GRGGKGVLTVM--YDRRRGRLVGALIVD-DDSELYAVTSGGGVIRTAAR 278 (327)
T ss_dssp CTTSCCEESSC--CCTTTCSEEEEEEEC-TTCEEEEEEGGGCEEEEEGG
T ss_pred CcCCCcEEEEE--ecCCCCeEEEEEEeC-CCccEEEEcCCCeEEEEehh
Confidence 01111111 111122244444333 34456667778887777654
No 372
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=57.42 E-value=1.1e+02 Score=27.52 Aligned_cols=158 Identities=14% Similarity=0.180 Sum_probs=76.5
Q ss_pred CCeEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccc--cccceEEEEECCCC-cEEEEE-cCC
Q 022019 119 GESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVD--EITAAFSVAFNPTG-TKIFAG-YNK 194 (304)
Q Consensus 119 ~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~--~~~~v~~i~~~~~~-~~l~~~-~d~ 194 (304)
...|..+.+.|. +...++++...+-|...+ ..|+.-..+....... ....+.+|+++|.. ..++++ .+.
T Consensus 14 ~g~i~~i~~~p~------~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~ 86 (789)
T 1sqj_A 14 GGYITGIVAHPK------TKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRY 86 (789)
T ss_dssp CSCEEEEEECSS------STTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSC
T ss_pred CCcEEEEEECCC------CCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCcc
Confidence 357778877553 233566666667665554 3343322222111000 12368899999853 444433 221
Q ss_pred e----EEEEEcCCCCccceeeeeeeccc--cccccceeEEEeecCCCcEEEEEecCCeEEEEecCCc---eEeEEec---
Q 022019 195 S----VRVFDVHRPGRDFEKYSTLKGNK--EGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM---ELLYVLH--- 262 (304)
Q Consensus 195 ~----i~v~d~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~---~~~~~~~--- 262 (304)
. -.||--...+............. ......+..++++|.+...++++...+.|.. ..+.+ +.+..+.
T Consensus 87 ~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~~-S~DgG~TW~~~~~~~~~~ 165 (789)
T 1sqj_A 87 VGDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIWK-SSDRAKTWTNVTSIPDAF 165 (789)
T ss_dssp TTSSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEEE-ESSTTSSCEEETTSCCCC
T ss_pred CCCcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEEE-ECCCCcccCCCccCcccc
Confidence 1 44555454455444332110000 0001135678888865667777764444322 22222 3322211
Q ss_pred cccCCeEEEEECCC-CcEEEEee
Q 022019 263 GQEGGVTHVQFSRD-GNYLYTGG 284 (304)
Q Consensus 263 ~~~~~v~~~~~~~~-~~~l~~~~ 284 (304)
.....+..+.++|. +..|+.+.
T Consensus 166 ~~~~~~~~i~~~p~~~~~~~~~~ 188 (789)
T 1sqj_A 166 TNGIGYTSVIFDPERNGTIYASA 188 (789)
T ss_dssp STTTCEEEEEECTTSTTCEEEEE
T ss_pred CCCCCeEEEEECCCCCCEEEEEE
Confidence 11245888999884 34565555
No 373
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=53.31 E-value=47 Score=27.89 Aligned_cols=56 Identities=16% Similarity=0.143 Sum_probs=36.7
Q ss_pred cEEEEEecCCeEEEEec-CCc-------eEeEEecc--ccCCeEEEEECCCCcEEEEeeccCCeEEE
Q 022019 236 GMLAIGSYSQTSAIYRE-DNM-------ELLYVLHG--QEGGVTHVQFSRDGNYLYTGGRKDPYILC 292 (304)
Q Consensus 236 ~~l~~~~~dg~i~i~d~-~~~-------~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~d~~i~v 292 (304)
..++.|+.+|.|.-.-+ ... ..+.++.. ...+|..|.+++++.+|+.++ .++.++|
T Consensus 422 tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s-~~~V~~v 487 (495)
T 1q47_A 422 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGS-TAGVAQL 487 (495)
T ss_dssp EEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEB-SSCEEEE
T ss_pred EEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEE-CCeEEEE
Confidence 46788999998754432 221 12333332 356899999999999999998 6765544
No 374
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=50.46 E-value=86 Score=24.30 Aligned_cols=203 Identities=8% Similarity=0.005 Sum_probs=101.2
Q ss_pred CCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCCCC
Q 022019 70 PDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHP 149 (304)
Q Consensus 70 ~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~dg~ 149 (304)
++..++++.+.+|.|+--.+.+-..... .......+....+..+..+.. ......++..+..|.
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~---------~~~g~~~~~lke~D~l~~~~~-------~~~~~~ll~~T~~G~ 69 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGT---------GGKGLSSFDLNDGDEIVIALC-------VNTHDYLFMISNEGK 69 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCS---------SCCCEECCCCCTTCCEEEEEE-------EETTCEEEEEETTSE
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhcccc---------CCCCceecccCCCCEEEEEEE-------ECCCCEEEEEECCCe
Confidence 4666888899999999877643221100 000111111222233333221 112335666677887
Q ss_pred EEEEEcCC---C------eeeE-EeecccccccccceEEE-EEC---CCCcEEEEEcCCeEEEEEcCCCCccceeeeeee
Q 022019 150 IHLWDATT---G------LLRC-TYRAYDAVDEITAAFSV-AFN---PTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLK 215 (304)
Q Consensus 150 i~i~d~~~---~------~~~~-~~~~~~~~~~~~~v~~i-~~~---~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~~~~ 215 (304)
++-+.... . ..+. .+.. .....|.++ ... ++..+++++..|.++...+..-.... ......
T Consensus 70 ~~~~~~~~ip~~~r~~~G~~i~~~l~l----~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r-~~G~~~ 144 (312)
T 1suu_A 70 LYLINAYEIKDSSRASKGQNISELINL----GDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVK-SRGVIV 144 (312)
T ss_dssp EEEEEGGGSCC-------CBGGGTSCC----CTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC-----CEEC
T ss_pred EEEEEHHHCCCCCccCCCcChhhccCC----CCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccC-CCcEEE
Confidence 76665532 1 1000 0111 111234443 332 33344557799999998875421110 001111
Q ss_pred ccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCC---------ceEeEEeccccCCeEEEEECCCCcEEEEeecc
Q 022019 216 GNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN---------MELLYVLHGQEGGVTHVQFSRDGNYLYTGGRK 286 (304)
Q Consensus 216 ~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~ 286 (304)
..... .+.+..+.... +...++..+.+|.+..+.... |.....+.. ...|.++..-+++..|++.+ .
T Consensus 145 i~L~~-~d~lv~~~~~~-~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~-~d~vv~~~~v~~~~~l~~vt-~ 220 (312)
T 1suu_A 145 IKLND-KDFVTSAEIVF-KDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKE-GDLFVKVLSVKENPYLLIVS-E 220 (312)
T ss_dssp BCCCT-TCCEEEEEEEC-TTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCT-TCCEEEEEECTTCSEEEEEE-T
T ss_pred EecCC-CCEEEEEEEeC-CCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCC-CCEEEEEEEECCCCeEEEEE-C
Confidence 11122 33455555444 445678889999998887643 222223332 34566666655566777788 8
Q ss_pred CCeEEEEeccc
Q 022019 287 DPYILCWDLRK 297 (304)
Q Consensus 287 d~~i~vwd~~~ 297 (304)
.|.+....+..
T Consensus 221 ~G~~kr~~~~e 231 (312)
T 1suu_A 221 NGYGKRLNMSK 231 (312)
T ss_dssp TSEEEEEEGGG
T ss_pred CCceEEEEHHH
Confidence 89988888754
No 375
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=49.78 E-value=1.4e+02 Score=26.52 Aligned_cols=116 Identities=12% Similarity=0.103 Sum_probs=57.5
Q ss_pred eEEEEeecCccceeCCCccEEEEEeCCCCEEEEEcCCCeeeEEeecccccc--cccceEEEEECCC-CcEEEEE-cC---
Q 022019 121 SVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVD--EITAAFSVAFNPT-GTKIFAG-YN--- 193 (304)
Q Consensus 121 ~v~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~--~~~~v~~i~~~~~-~~~l~~~-~d--- 193 (304)
.|..+.+.|. +...+.++...+.|+..+= .++.-..+....... ....+.+|+++|. ...++++ ..
T Consensus 24 ~i~~i~~~p~------~~~~~~~~~~~ggv~rS~D-~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~ 96 (737)
T 2cn3_A 24 FMPGIVFNET------EKDLIYARAAIGGAYRWDP-STETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTN 96 (737)
T ss_dssp CCCEEEECSS------STTCEEEECSSSCEEEEET-TTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSS
T ss_pred eeeEEEECCC------CCCEEEEEecCCcEEEeCC-CCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEeccccc
Confidence 5666666443 2234555665666666552 333222222111000 1236889999984 3344433 21
Q ss_pred ----CeEEEEEcCCCCccceeeeeeeccccc---cccceeEEEeecCCCcEEEEEecC
Q 022019 194 ----KSVRVFDVHRPGRDFEKYSTLKGNKEG---QAGIMSAIAFSPTHTGMLAIGSYS 244 (304)
Q Consensus 194 ----~~i~v~d~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~p~~~~~l~~~~~d 244 (304)
+...||.-...+..+........ ..+ ....+..++++|.+...++++...
T Consensus 97 ~~~~~~~~l~~S~DgG~TW~~~~~~~~-~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~ 153 (737)
T 2cn3_A 97 DWLPNMGAILRSTDRGETWEKTILPFK-MGGNMPGRSMGERLAIDPNDNRILYLGTRC 153 (737)
T ss_dssp SSSCCCCEEEEESSSSSSCEEEECSSC-CCTTSTTTTSCCCEEECSSCTTCEEEECST
T ss_pred ccccCCccEEEeCCCCCCcccCCCCcc-cCCCcCcccccceEEECCCCCCEEEEeecc
Confidence 13566766666666554432110 000 011246789999766677777643
No 376
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=48.06 E-value=1e+02 Score=24.52 Aligned_cols=96 Identities=10% Similarity=0.039 Sum_probs=47.3
Q ss_pred ceEEEEECCC--CcEEEEEc-----------CCeEEEEEcCCCCccceeeeeeeccccccc----cceeEEEeecCCCcE
Q 022019 175 AAFSVAFNPT--GTKIFAGY-----------NKSVRVFDVHRPGRDFEKYSTLKGNKEGQA----GIMSAIAFSPTHTGM 237 (304)
Q Consensus 175 ~v~~i~~~~~--~~~l~~~~-----------d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~----~~v~~~~~~p~~~~~ 237 (304)
.+.++.++|. +..+++.. ++...+|.....+..+..+.. ...... .....++++|.+...
T Consensus 279 ~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~---glp~~~~~~~~~~~~~~~~p~~~~~ 355 (394)
T 3b7f_A 279 IGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDR---GLPTDQAWLTVKRQAMTADAHAPVG 355 (394)
T ss_dssp CEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECB---TSCCSSCCCCCCTBSEEECCSSSCC
T ss_pred ceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCC---CCCCccccceEEEEEEEECCCCCCE
Confidence 4567888863 33444332 334566666554554443321 111100 012467888855455
Q ss_pred EEEEecCCeEEEEecCCceEeEEeccccCCeEEEEEC
Q 022019 238 LAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFS 274 (304)
Q Consensus 238 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~ 274 (304)
|++++.++.|..-+ ..++.-..+..+-..+.++.|.
T Consensus 356 l~~g~~~g~l~~S~-D~G~tW~~~~~~lp~~~~v~~~ 391 (394)
T 3b7f_A 356 VYFGTTGGEIWASA-DEGEHWQCIASHLPHIYAVQSA 391 (394)
T ss_dssp EEEECTTSCEEEES-STTSBCEEEECSCSCEEEEEEE
T ss_pred EEEEeCCCeEEEEC-CCCCCceEcccCCCCeeEEEEe
Confidence 66676666655433 2333333343334457777663
No 377
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=47.78 E-value=89 Score=23.71 Aligned_cols=127 Identities=10% Similarity=0.037 Sum_probs=60.6
Q ss_pred CCCEEEEEcCCCeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccceeeeeeecccccccccee
Q 022019 147 DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMS 226 (304)
Q Consensus 147 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~v~ 226 (304)
||.|+.|-....-... ++ . .....|..++.-.... ++.. +|.|+.|-....+.... . ......|.
T Consensus 80 ~G~v~~wG~n~~Gqlg-~P--~--~~~~~v~~ia~G~~hs-~al~-~G~v~~wG~n~~gqlg~----~----~~~~~~i~ 144 (282)
T 3qhy_B 80 DGEVIAWGGNEDGQTT-VP--A--EARSGVDAIAAGAWAS-YALK-DGKVIAWGDDSDGQTTV----P----AEAQSGVT 144 (282)
T ss_dssp TTEEEEEECCTTSTTC-CC--G--GGSSSEEEEEEETTEE-EEEE-TTEEEEEECCTTSTTSC----C----GGGGSSEE
T ss_pred CCEEEEeeCCCCCCCC-CC--c--ccCCCeEEEECcCCEE-EEEe-CCeEEEecCCCCCcCCC----C----ccCCCCeE
Confidence 8888888754321111 01 0 0112566777654433 3344 99999998765332110 0 11123366
Q ss_pred EEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccccCCeEEEEECCCCcEEEEeeccCCeEEEEecc
Q 022019 227 AIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLR 296 (304)
Q Consensus 227 ~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~d~~i~vwd~~ 296 (304)
.++... ...+.-. ||.|+.|-......+..-..-...|..++-..+.. ++. . ||.|..|-..
T Consensus 145 ~i~~G~---~~~~~l~-~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~hs-~al-~--~G~v~~wG~n 206 (282)
T 3qhy_B 145 ALDGGV---YTALAVK-NGGVIAWGDNYFGQTTVPAEAQSGVDDVAGGIFHS-LAL-K--DGKVIAWGDN 206 (282)
T ss_dssp EEEECS---SEEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEE-EEE-E--TTEEEEEECC
T ss_pred EEEccc---CEEEEEE-CCEEEEecCCCCCCCCCceecCCCeEEEEecCCEE-EEE-E--CCeEEEEECC
Confidence 665543 2223334 78888886543211111111123466666543322 222 3 6777777543
No 378
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=46.62 E-value=82 Score=27.64 Aligned_cols=56 Identities=16% Similarity=0.196 Sum_probs=36.6
Q ss_pred cEEEEEecCCeEE-EEecCCce-------EeEEec--cccCCeEEEEECCCCcEEEEeeccCCeEEE
Q 022019 236 GMLAIGSYSQTSA-IYREDNME-------LLYVLH--GQEGGVTHVQFSRDGNYLYTGGRKDPYILC 292 (304)
Q Consensus 236 ~~l~~~~~dg~i~-i~d~~~~~-------~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~d~~i~v 292 (304)
..++.|+.+|.|. +.-..... .+.++. ....+|..|.+++++.+|+.++ .++.++|
T Consensus 430 tVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t-~~~V~kV 495 (667)
T 4gz8_A 430 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGS-TAGVAQL 495 (667)
T ss_dssp EEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEB-SSCEEEE
T ss_pred EEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEE-CCEEEEE
Confidence 4678899999875 33322111 222222 3456799999999999999998 7765544
No 379
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=43.19 E-value=53 Score=27.95 Aligned_cols=67 Identities=15% Similarity=0.151 Sum_probs=41.1
Q ss_pred eeEEEeecC-CCcEEEEEecCCeEEEEecCCc----eEeEEec--cccCCeE-EEEECCCCcEEEEeeccCCeEEE
Q 022019 225 MSAIAFSPT-HTGMLAIGSYSQTSAIYREDNM----ELLYVLH--GQEGGVT-HVQFSRDGNYLYTGGRKDPYILC 292 (304)
Q Consensus 225 v~~~~~~p~-~~~~l~~~~~dg~i~i~d~~~~----~~~~~~~--~~~~~v~-~~~~~~~~~~l~~~~~~d~~i~v 292 (304)
+++++.... +-..++.|+.+|.|.-..+... ..+.++. ....+|. .|.+++++.+|+.++ .++.++|
T Consensus 402 lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s-~~~V~kv 476 (539)
T 3al9_A 402 LTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMS-ERQVTRV 476 (539)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEEC-SSEEEEE
T ss_pred eEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEe-cccccee
Confidence 444544431 3347788999998765544321 2233332 2245775 899999999999998 5554443
No 380
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=42.60 E-value=1.2e+02 Score=23.69 Aligned_cols=152 Identities=10% Similarity=0.015 Sum_probs=78.9
Q ss_pred CCccEEEEEeCCCCEEEEEcCCCe----eeEEeecccccccccce-EEEEECCCCcEEEEEcCCeEEEEEcCC---CCcc
Q 022019 136 PTSCVFASTTRDHPIHLWDATTGL----LRCTYRAYDAVDEITAA-FSVAFNPTGTKIFAGYNKSVRVFDVHR---PGRD 207 (304)
Q Consensus 136 ~~~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~~~~~~v-~~i~~~~~~~~l~~~~d~~i~v~d~~~---~~~~ 207 (304)
|+...+++.+.+|.|+--.+..-+ ....+... ..+ ..+..+.....++.+..|.++-+.... .+..
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~------D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~ 76 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDT------DRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWK 76 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTT------CCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTT
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCCC------CEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCC
Confidence 355678888999999877654211 00111111 133 333444455566677888877665532 1111
Q ss_pred cee--eeeeeccccccccceeEEEeecC--CCcEEEEEecCCeEEEEecCCc--------eEeEEeccccCCeEEEEECC
Q 022019 208 FEK--YSTLKGNKEGQAGIMSAIAFSPT--HTGMLAIGSYSQTSAIYREDNM--------ELLYVLHGQEGGVTHVQFSR 275 (304)
Q Consensus 208 ~~~--~~~~~~~~~~~~~~v~~~~~~p~--~~~~l~~~~~dg~i~i~d~~~~--------~~~~~~~~~~~~v~~~~~~~ 275 (304)
..- +..... +. ....|.++..-++ ...+++.++.+|.++-..+... .....+.. ...+..+....
T Consensus 77 a~G~~i~~~i~-L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e-~d~lv~~~~~~ 153 (323)
T 1wp5_A 77 DLGQHIANIIP-ID-RDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKN-DDQVVDVHLTD 153 (323)
T ss_dssp SCCEEGGGTSC-CC-TTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCT-TCCEEEEEEEC
T ss_pred CCCcChhhccC-CC-CCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCC-CCEEEEEEEeC
Confidence 000 001110 11 1223444432231 2457888999999999877422 22223332 24555555544
Q ss_pred CCcEEEEeeccCCeEEEEeccc
Q 022019 276 DGNYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 276 ~~~~l~~~~~~d~~i~vwd~~~ 297 (304)
....|+..+ .+|.+..+....
T Consensus 154 ~~~~i~l~T-~~G~~irf~~~e 174 (323)
T 1wp5_A 154 GMNELFLVT-HNGYALWFDESE 174 (323)
T ss_dssp SCSEEEEEE-TTSEEEEEEGGG
T ss_pred CCCEEEEEe-CCCcEEEEEHHH
Confidence 455666677 789888887754
No 381
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=42.18 E-value=1.3e+02 Score=24.05 Aligned_cols=162 Identities=9% Similarity=0.023 Sum_probs=77.4
Q ss_pred EcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEEEEEeCC
Q 022019 68 WSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRD 147 (304)
Q Consensus 68 ~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~d 147 (304)
+-|+..++++.+.+|.|+--.+.+.... ..............+..+..+.. ......++..+..
T Consensus 3 lI~~e~~~v~lT~~GyIKr~~l~~y~~~---------~r~g~g~~~~~lke~D~l~~~~~-------~~t~d~ll~fT~~ 66 (370)
T 3l6v_A 3 LIAPEDVVVTLSHAGYAKRQPVSAYRAQ---------RRGGRGRSAASTKEEDFIDQLWL-------VNTHDTLLTFTSS 66 (370)
T ss_dssp CCCCCCEEEEEESSCEEEEEEHHHHHHT---------CCCCCCSEEEECSCCCCEEEEEE-------ECTTCEEEEEETT
T ss_pred cccCCCEEEEEeCCCEEEEeeHHHhhhh---------ccCCCCceecccCCCCEEEEEEE-------ecCCCEEEEEeCC
Confidence 3467788999999999997654321000 00011122233333444443322 1133455556677
Q ss_pred CCEEEEEcC---C------CeeeEE-eecccccccccceEEEE-ECC--CCcEEE-EEcCCeEEEEEcCCCCccc-eeee
Q 022019 148 HPIHLWDAT---T------GLLRCT-YRAYDAVDEITAAFSVA-FNP--TGTKIF-AGYNKSVRVFDVHRPGRDF-EKYS 212 (304)
Q Consensus 148 g~i~i~d~~---~------~~~~~~-~~~~~~~~~~~~v~~i~-~~~--~~~~l~-~~~d~~i~v~d~~~~~~~~-~~~~ 212 (304)
|.++-+... . |..... +.. .....|.++. ... ++.+++ ++..|.++...+..-.... ....
T Consensus 67 G~~~~~~~~eip~~~r~a~G~~i~~ll~L----~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ 142 (370)
T 3l6v_A 67 GKVFWLPVHQLPEAGSNARGRPIINWIPL----ESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKI 142 (370)
T ss_dssp SEEEEEEGGGSCBCCTTSCCEEGGGSCCC----CTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEE
T ss_pred CeEEEEEHHHCcCCCcccCCcCHhhccCC----CCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceE
Confidence 766655432 1 111111 111 1112444443 321 233444 7799999998875321110 1111
Q ss_pred eeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecC
Q 022019 213 TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED 253 (304)
Q Consensus 213 ~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~ 253 (304)
.+ .... .+.+..+.... +...++..+.+|.+..|+..
T Consensus 143 ai--~L~~-~d~lv~v~~~~-~~~~i~l~T~~G~~irf~~~ 179 (370)
T 3l6v_A 143 AI--NLDE-GDALVGVALTD-GDRDVLLFASNGKTVRFGES 179 (370)
T ss_dssp SS--CCCT-TCCEEEEEEEC-SCCEEEEEETTSEEEEEEGG
T ss_pred EE--EeCC-CCEEEEEEEeC-CCceEEEEeCCCeEEEEEcc
Confidence 11 1111 23344444444 44567778888988888653
No 382
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=41.12 E-value=95 Score=26.76 Aligned_cols=56 Identities=7% Similarity=0.046 Sum_probs=37.1
Q ss_pred cEEEEEecCCeEEEE-ecCCc-----eEeEEec--cccCCeEEEEECCCCcEEEEeeccCCeEEE
Q 022019 236 GMLAIGSYSQTSAIY-REDNM-----ELLYVLH--GQEGGVTHVQFSRDGNYLYTGGRKDPYILC 292 (304)
Q Consensus 236 ~~l~~~~~dg~i~i~-d~~~~-----~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~d~~i~v 292 (304)
..++.|+.+|.|.-. ..... ..+..+. ....+|..+.++++..+|+.++ .++.++|
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s-~~~V~qV 444 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSS-QWEVSQV 444 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEEC-SSEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEe-cceEEEc
Confidence 477889999987643 32222 1222332 2456799999999999999988 6665554
No 383
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=39.37 E-value=52 Score=23.23 Aligned_cols=35 Identities=9% Similarity=0.107 Sum_probs=25.7
Q ss_pred ccceeEEEeecCCCcEEEEEecCCeEEEEecCCce
Q 022019 222 AGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME 256 (304)
Q Consensus 222 ~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~ 256 (304)
...+.++.|...+.+-+++.+.+|++.+||..-|+
T Consensus 118 ~~hllsl~f~~g~aHaia~S~~g~~~tlFDPN~GE 152 (188)
T 1ukf_A 118 RKHLLSLRFANVQGHAIACSCEGSQFKLFDPNLGE 152 (188)
T ss_dssp CEEEEEEEETTTEEEEEEEEEETTEEEEEETTTEE
T ss_pred CceEEEEEecCCCceeEEeccCCCeEEEeCCCCce
Confidence 34466677776445667777789999999998775
No 384
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=36.81 E-value=2e+02 Score=24.69 Aligned_cols=43 Identities=7% Similarity=0.029 Sum_probs=26.1
Q ss_pred ccccceeEEEeecCC-CcEEEEEecCC----eEEEEecCCceEeEEec
Q 022019 220 GQAGIMSAIAFSPTH-TGMLAIGSYSQ----TSAIYREDNMELLYVLH 262 (304)
Q Consensus 220 ~~~~~v~~~~~~p~~-~~~l~~~~~dg----~i~i~d~~~~~~~~~~~ 262 (304)
+|...+....|.|+. +.-++.+.+++ -..+.|.++++.+....
T Consensus 361 gHGDa~hv~dldP~r~GlEv~~~~E~~~~~~G~~~~dA~tG~vlw~~~ 408 (591)
T 2zux_A 361 GHGDALHTGDLDPGRPGLEVFQVHEDKNAKYGLSFRDAATGKILWGVY 408 (591)
T ss_dssp CCCSCEEEECCCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEEC
T ss_pred CCCCeeEEeecCCCCCCcEEEEEecCCCCCCccEEEECCCCcEEEEcC
Confidence 566667777777743 34455555441 34557777777776654
No 385
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=34.80 E-value=1.5e+02 Score=22.49 Aligned_cols=165 Identities=10% Similarity=0.011 Sum_probs=83.3
Q ss_pred CCceeEEEEcC-CCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCc
Q 022019 60 NNFLKGIKWSP-DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS 138 (304)
Q Consensus 60 ~~~V~~i~~s~-~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 138 (304)
...|..+-... +..+++..+.+|.++...+.+-. .. ......+.+..+..+..+.. ....
T Consensus 67 ~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~-~~-----------~~G~~~i~lkegD~l~~~~~-------~~~~ 127 (276)
T 3no0_A 67 EEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFE-YK-----------AQGMPIIKLTEGDEVVSIAS-------SVDE 127 (276)
T ss_dssp TCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTT-TC-----------STTEECSCCCTTCCEEEEEE-------CCSS
T ss_pred CCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhh-hh-----------cCCeEEEecCCCCEEEEEEE-------eCCC
Confidence 45566654421 46789999999999998876432 10 01111122223344444332 1234
Q ss_pred cEEEEEeCCCCEEEEEcCCC-------eeeEEeecccccccccceEEEEE-CCCCcEEEEEcCCeEEEEEcCCCC---cc
Q 022019 139 CVFASTTRDHPIHLWDATTG-------LLRCTYRAYDAVDEITAAFSVAF-NPTGTKIFAGYNKSVRVFDVHRPG---RD 207 (304)
Q Consensus 139 ~~l~~~~~dg~i~i~d~~~~-------~~~~~~~~~~~~~~~~~v~~i~~-~~~~~~l~~~~d~~i~v~d~~~~~---~~ 207 (304)
..++..+..|.++.++...- .-...+... ....|.++.. .++...++++..|.++...+..-. +.
T Consensus 128 ~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~----~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~ 203 (276)
T 3no0_A 128 THILLFTKKGRVARFSVREVPPSTPGARGVQGIKLE----KNDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRG 203 (276)
T ss_dssp CEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC----TTCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTT
T ss_pred CEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccC----CCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCC
Confidence 46777788898888876421 111111111 1124545443 333444447789999888875321 11
Q ss_pred ceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEE--EecC
Q 022019 208 FEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAI--YRED 253 (304)
Q Consensus 208 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i--~d~~ 253 (304)
.+-...+ ...+.+..+.... +...++..+.+|.+.. ++..
T Consensus 204 gkGv~~i-----~~~~~lv~~~~~~-~~~~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 204 VKGTEVS-----GTKDTLVDLIPIK-EEVELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp CCCEECC-----CSSSCEEEEEEES-SEEEEEEEETTSCEEEEEEEGG
T ss_pred CcceEEE-----cCCCcEEEEEEeC-CCCEEEEEcCCCeEEEeeeCHH
Confidence 1111111 1122344443333 3446667777888777 7654
No 386
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=32.78 E-value=2e+02 Score=25.31 Aligned_cols=56 Identities=7% Similarity=0.126 Sum_probs=36.8
Q ss_pred cEEEEEecCCeEEE-EecCCce-EeEEec--cccCCeEEEEECCCC--cEEEEeeccCCeEEE
Q 022019 236 GMLAIGSYSQTSAI-YREDNME-LLYVLH--GQEGGVTHVQFSRDG--NYLYTGGRKDPYILC 292 (304)
Q Consensus 236 ~~l~~~~~dg~i~i-~d~~~~~-~~~~~~--~~~~~v~~~~~~~~~--~~l~~~~~~d~~i~v 292 (304)
..++.|+.+|.|.- ....... .+..+. ....+|..|.++++. .+|+.++ .++.++|
T Consensus 416 tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s-~~~V~~v 477 (663)
T 1olz_A 416 DVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGS-NSGVVQA 477 (663)
T ss_dssp EEEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEEC-SSCEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEE-cCeEEEE
Confidence 47888999998743 3443332 222222 234688899999988 8999988 6665544
No 387
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=31.73 E-value=1.7e+02 Score=22.17 Aligned_cols=92 Identities=11% Similarity=0.037 Sum_probs=47.7
Q ss_pred EEEEeCCCCEEEEEcCC-CeeeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEcCCCCccceeeeeeecccc
Q 022019 141 FASTTRDHPIHLWDATT-GLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKE 219 (304)
Q Consensus 141 l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~ 219 (304)
.+... ||.|+.|=... ++.- .+. .....|..++.-..... +.. ||.|+.|-....+.... . .
T Consensus 114 s~al~-~G~v~~wG~n~~gqlg--~~~----~~~~~i~~i~~G~~~~~-~l~-~G~v~~wG~n~~gqlg~----p----~ 176 (282)
T 3qhy_B 114 SYALK-DGKVIAWGDDSDGQTT--VPA----EAQSGVTALDGGVYTAL-AVK-NGGVIAWGDNYFGQTTV----P----A 176 (282)
T ss_dssp EEEEE-TTEEEEEECCTTSTTS--CCG----GGGSSEEEEEECSSEEE-EEE-TTEEEEEECCTTSTTSC----C----G
T ss_pred EEEEe-CCeEEEecCCCCCcCC--CCc----cCCCCeEEEEcccCEEE-EEE-CCEEEEecCCCCCCCCC----c----e
Confidence 33344 88898887543 2211 110 11125667766544332 233 89999998765332210 0 1
Q ss_pred ccccceeEEEeecCCCcEEEEEecCCeEEEEecC
Q 022019 220 GQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED 253 (304)
Q Consensus 220 ~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~ 253 (304)
.....|..++... ...++. .||.|+.|=..
T Consensus 177 ~~~~~v~~i~~G~--~hs~al--~~G~v~~wG~n 206 (282)
T 3qhy_B 177 EAQSGVDDVAGGI--FHSLAL--KDGKVIAWGDN 206 (282)
T ss_dssp GGGSSEEEEEECS--SEEEEE--ETTEEEEEECC
T ss_pred ecCCCeEEEEecC--CEEEEE--ECCeEEEEECC
Confidence 1123466666543 223444 69999999643
No 388
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=31.46 E-value=2.8e+02 Score=24.62 Aligned_cols=100 Identities=10% Similarity=0.017 Sum_probs=55.2
Q ss_pred CCeEEEEEcCCCCcc---ceeeeeeeccccccccceeEEEeecCCCcEEEEEecCCe--EEEEecCCce-EeEE-eccc-
Q 022019 193 NKSVRVFDVHRPGRD---FEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQT--SAIYREDNME-LLYV-LHGQ- 264 (304)
Q Consensus 193 d~~i~v~d~~~~~~~---~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~--i~i~d~~~~~-~~~~-~~~~- 264 (304)
.+.|...|+...... ......+.. ......+..+.|.+ + .++++...++. +.++|+.++. .... +...
T Consensus 319 ~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~-~-~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~ 394 (711)
T 4hvt_A 319 AGSLVALHFTDLLKTESDKTSLKILFT--PTANEVFNFISTTK-D-RVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPY 394 (711)
T ss_dssp TTCEEEEEGGGGGSCGGGCTTCEEEEC--CCTTEEEEEEEECS-S-CEEEEEEETTEEEEEEECEETTEECCCEEECCCS
T ss_pred CCeEEEEECCcccccccccccceEEEC--CCCCCeEEEEEEEC-C-EEEEEEEECCEEEEEEEECCCCceEEEeccCCCC
Confidence 566888888653110 011111111 22334577888887 4 57788888875 6777776664 2223 2211
Q ss_pred cCCeEEEEECCCCcEE-EEee--ccCCeEEEEecc
Q 022019 265 EGGVTHVQFSRDGNYL-YTGG--RKDPYILCWDLR 296 (304)
Q Consensus 265 ~~~v~~~~~~~~~~~l-~~~~--~~d~~i~vwd~~ 296 (304)
.+.+.....++++..+ ++.+ ..-+.+..+|+.
T Consensus 395 ~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 395 QNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp TTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred CeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 2457777777776544 3333 134577888775
No 389
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=27.78 E-value=1.6e+02 Score=25.00 Aligned_cols=67 Identities=12% Similarity=0.074 Sum_probs=41.7
Q ss_pred eeEEEeecC-CCcEEEEEecCCeEEEEecC-Cc--eEeEEec-cccCCe-EEEEECCCCcEEEEeeccCCeEEE
Q 022019 225 MSAIAFSPT-HTGMLAIGSYSQTSAIYRED-NM--ELLYVLH-GQEGGV-THVQFSRDGNYLYTGGRKDPYILC 292 (304)
Q Consensus 225 v~~~~~~p~-~~~~l~~~~~dg~i~i~d~~-~~--~~~~~~~-~~~~~v-~~~~~~~~~~~l~~~~~~d~~i~v 292 (304)
.+.|+.... +-..++.|+.+|.|.-.-.. +. ..+..+. ....+| ..+.++++..+|+.++ .++.++|
T Consensus 389 lT~IaVd~~~g~tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v~~~~pi~~~l~l~~~~~~Lyv~s-~~~V~~v 461 (528)
T 3ol2_B 389 LTAVAVTMEDGHTIAFLGDSQGQLHRVYLGPGSDGHPYSTQSIQQGSAVSRDLTFDGTFEHLYVMT-QSTLLKV 461 (528)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEECSSSCCSCCSEEEESSTTSCCCSCCEECTTSSEEEEEC-SSCEEEE
T ss_pred eEEEEEEeecCeEEEEEECCCCeEEEEEEcCCCCeeEEeeeccCCCCcceeeEEEecCCCEEEEEe-CCEEEEE
Confidence 455554432 33567789999997644432 21 1222222 234567 4899999999999998 7776655
No 390
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=26.55 E-value=2.3e+02 Score=24.29 Aligned_cols=67 Identities=15% Similarity=0.149 Sum_probs=42.0
Q ss_pred eeEEEeecC-----CCcEEEEEecCCeEE-EEecCC-------ceEeEEecc-----------ccCCeEEEEECCCCcEE
Q 022019 225 MSAIAFSPT-----HTGMLAIGSYSQTSA-IYREDN-------MELLYVLHG-----------QEGGVTHVQFSRDGNYL 280 (304)
Q Consensus 225 v~~~~~~p~-----~~~~l~~~~~dg~i~-i~d~~~-------~~~~~~~~~-----------~~~~v~~~~~~~~~~~l 280 (304)
.+.|+.... .-..++.|+.+|.|+ +..... ...+.++.. ...+|..+.++++...|
T Consensus 405 lT~IaVd~~~g~~~~ytVlFLGTd~G~l~Kvv~~~~~~~~~~~~~~iEEi~vf~~~~~~~~~~~~~pI~~L~ls~~~~~L 484 (565)
T 3oky_B 405 LTKIAVDNAAGPYQNHTVVFLGSEKGIILKFLARIGSSGFLNGSLFLEEMNVYNPEKCSYDGVEDKRIMGMQLDRASGSL 484 (565)
T ss_dssp EEEEEEEEEETTTTCEEEEEEEETTSEEEEEEECC-----CCCCEEEEEEECCCHHHHCBTTBCCCCCCEEEEEGGGTEE
T ss_pred eEEEEEEEEecCCCceEEEEEECCCCeEEEEEecCCCCccccccEEEEEEEEeccccccccccCCCceEEEEEcCCCCEE
Confidence 466666641 135778899999975 433221 112222221 14578899999999999
Q ss_pred EEeeccCCeEEE
Q 022019 281 YTGGRKDPYILC 292 (304)
Q Consensus 281 ~~~~~~d~~i~v 292 (304)
+.++ .++.++|
T Consensus 485 YV~s-~~~V~qV 495 (565)
T 3oky_B 485 YVAF-STCVIKV 495 (565)
T ss_dssp EEEC-SSCEEEE
T ss_pred EEEe-cCeEEEe
Confidence 9998 7776655
No 391
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=25.74 E-value=2.9e+02 Score=24.53 Aligned_cols=52 Identities=15% Similarity=0.133 Sum_probs=33.5
Q ss_pred ceeEEEeecCCCcEEEEEecCCeEEEEecCCceEeEEeccc-------cCCeEEEEECCC
Q 022019 224 IMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQ-------EGGVTHVQFSRD 276 (304)
Q Consensus 224 ~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------~~~v~~~~~~~~ 276 (304)
.|..++++|.+...++++...+.|...+- .++.-..+..+ ...|.+++++|.
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D-~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~ 82 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDP-STETWIPLLDHFQMDEYSYYGVESIATDPV 82 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEET-TTTEEEECCTTCCGGGGGGGCEEEEEECSS
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCC-CCCCEEECcCccCcccccCCCcceEEeCCC
Confidence 68999999976667777877777666653 23222222211 246899999983
No 392
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=24.44 E-value=1.6e+02 Score=26.13 Aligned_cols=74 Identities=5% Similarity=0.035 Sum_probs=40.6
Q ss_pred eeEEE-eecCCCcEEEEEecCC----eEEEEecCCceEeE-Eec-cccC------CeEEEEECCCCcEEEEee-------
Q 022019 225 MSAIA-FSPTHTGMLAIGSYSQ----TSAIYREDNMELLY-VLH-GQEG------GVTHVQFSRDGNYLYTGG------- 284 (304)
Q Consensus 225 v~~~~-~~p~~~~~l~~~~~dg----~i~i~d~~~~~~~~-~~~-~~~~------~v~~~~~~~~~~~l~~~~------- 284 (304)
...+. ++|++...+++-|..| .++++|+.+++.+. .+. ..+. ....++|..+..++++..
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~ 210 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEIT 210 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBC
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcC
Confidence 34444 7886666666656555 49999999987653 122 0011 113347764444444321
Q ss_pred --ccCCeEEEEecccc
Q 022019 285 --RKDPYILCWDLRKA 298 (304)
Q Consensus 285 --~~d~~i~vwd~~~~ 298 (304)
.....|+.|.+.+.
T Consensus 211 ~~~~~~~v~~~~~Gt~ 226 (711)
T 4hvt_A 211 SSLYPNSLYIWKRGES 226 (711)
T ss_dssp TTSSBCEEEEEETTSC
T ss_pred cCCCCCEEEEEECCCC
Confidence 12356888877653
No 393
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=24.21 E-value=3.4e+02 Score=23.30 Aligned_cols=157 Identities=14% Similarity=0.127 Sum_probs=81.9
Q ss_pred cEEEEEeCCCCEEEEEcCCCeeeEEeecccc-----------c---cc------ccceEEEEECCCCc-EEEEE---cCC
Q 022019 139 CVFASTTRDHPIHLWDATTGLLRCTYRAYDA-----------V---DE------ITAAFSVAFNPTGT-KIFAG---YNK 194 (304)
Q Consensus 139 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-----------~---~~------~~~v~~i~~~~~~~-~l~~~---~d~ 194 (304)
..+++|+.||.++.++.. |+....+..... . .| ...+..+.+...-+ +|+.+ ...
T Consensus 86 ~~VyvGaNDGmLHaF~a~-G~E~wAfiP~~~l~~L~~l~~~~y~~~~h~Y~VDG~p~~~Dv~~~g~wrtvLvggmg~GG~ 164 (570)
T 3hx6_A 86 PRVYVGANDGMLHGFDTD-GNETFAFIPSAVFEKMHKLTARGYQGGAHQFYVDGSPVVADAFFGGAWHTVLIGSLRAGGK 164 (570)
T ss_dssp CEEEEECSSSCEEECCSS-CCCCEEECCHHHHHHCC-------CCHHHHHHHHCCCEEEEEEETTEEEEEEEEECTTSCS
T ss_pred cEEEEECCCceEEEECCC-CcEEEEECCHHHHHHHHHHhccCccccCcceecCCCCEEEEEEeCCcceEEEEEecCCCCc
Confidence 478899999999999976 544333221110 0 01 11223343332222 34444 344
Q ss_pred eEEEEEcCCCCccceeeeeeecc---ccccccceeEEEeecCCCcEEEEEec------CCeEEEEecCCceEeEEecccc
Q 022019 195 SVRVFDVHRPGRDFEKYSTLKGN---KEGQAGIMSAIAFSPTHTGMLAIGSY------SQTSAIYREDNMELLYVLHGQE 265 (304)
Q Consensus 195 ~i~v~d~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~p~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~ 265 (304)
.++..|+..+.. ...+..+... ..++.-.-..+.--+++...++.|+. ...|+|.|+.++.++..+....
T Consensus 165 ~~yALDVT~P~~-p~~LWe~~~~~~~~LG~t~s~P~I~~~~~g~w~~vfG~GY~~~~~~~~Lyv~d~~tG~li~~i~~~~ 243 (570)
T 3hx6_A 165 GLFALDVTDPAN-IKLLWEIGVDQEPDLGYSFPKPTVARLHNGKWAVVTGNGYSSMNDKAALLIIDMETGAITRKLEVTG 243 (570)
T ss_dssp EEEEEECSSGGG-CEEEEEEETTTCTTCCBCCSCCEEEECTTSSEEEEEECCBSCTTCCEEEEEEETTTCCEEEEEEECC
T ss_pred EEEEEECCCCCC-CceeEEECCCCccccCccccCCEEEEecCCCEEEEEccccCCCCCccEEEEEECCCCceEEEEecCC
Confidence 678888866433 2222333210 01111111122222324444444442 3469999999999988875321
Q ss_pred -----CCeEEEE-ECC--CC--cEEEEeeccCCeEEEEecccc
Q 022019 266 -----GGVTHVQ-FSR--DG--NYLYTGGRKDPYILCWDLRKA 298 (304)
Q Consensus 266 -----~~v~~~~-~~~--~~--~~l~~~~~~d~~i~vwd~~~~ 298 (304)
..+..+. +.. || .++++|. ..|.|.-+|+...
T Consensus 244 ~~~~~~Gls~~~~~D~d~Dg~~D~~YaGD-l~GnlWRfDl~~~ 285 (570)
T 3hx6_A 244 RTGVPNGLSSPRLADNNSDGVADYAYAGD-LQGNLWRFDLIAG 285 (570)
T ss_dssp STTSCCCEEEEEEECTTSSSBCCEEEEEE-TTSEEEEEECSCS
T ss_pred CCccCCccccceEEecCCCCceeEEEEEe-CCCcEEEEEcCCC
Confidence 2333333 333 33 4789998 8999988888764
No 394
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=24.11 E-value=2e+02 Score=25.41 Aligned_cols=57 Identities=16% Similarity=0.158 Sum_probs=36.8
Q ss_pred CcEEEEEecCCeEEEEecCC----ceEeEEecc--ccCCe-EEEEECCCCcEEEEeeccCCeEEE
Q 022019 235 TGMLAIGSYSQTSAIYREDN----MELLYVLHG--QEGGV-THVQFSRDGNYLYTGGRKDPYILC 292 (304)
Q Consensus 235 ~~~l~~~~~dg~i~i~d~~~----~~~~~~~~~--~~~~v-~~~~~~~~~~~l~~~~~~d~~i~v 292 (304)
-..++.|+.+|.|+-.-+.. ...+..+.. ...+| ..+.++++..+|+.++ .++.++|
T Consensus 412 ~tVlFLGT~~G~l~Kv~~~~~~~~~~~~ee~~v~~~~~pI~~~l~l~~~~~~Lyv~s-~~~V~qv 475 (681)
T 3oky_A 412 YSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMS-ERQVTRV 475 (681)
T ss_dssp EEEEEEEBTTSEEEEEECCCTTTCCEEEEEEECCTTCCCCCSCCEECTTSSEEEEEC-SSEEEEE
T ss_pred eEEEEEECCCceEEEEEECCCCCceEEEEEeeeccCCCceeeeeEEcCCCCEEEEEe-cCEEEEE
Confidence 34778899999986544332 123333321 34566 6899999989999888 6655544
No 395
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=22.47 E-value=3.6e+02 Score=22.93 Aligned_cols=63 Identities=11% Similarity=0.065 Sum_probs=39.0
Q ss_pred CccEEEEEeCCCCEEEEEcCCCe----eeEEeecccccccccceE-EEEECCCCcEEEEEcCCeEEEEEcC
Q 022019 137 TSCVFASTTRDHPIHLWDATTGL----LRCTYRAYDAVDEITAAF-SVAFNPTGTKIFAGYNKSVRVFDVH 202 (304)
Q Consensus 137 ~~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~~~~~~v~-~i~~~~~~~~l~~~~d~~i~v~d~~ 202 (304)
+...++.|..+|.|.-..+.... ....+.... ...+|. .|.+++++.+|+++.+..|.-..+.
T Consensus 412 ~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~---~~~pv~~~l~~~~~~~~Lyv~s~~~V~kvpl~ 479 (539)
T 3al9_A 412 GYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFK---DGSPILRDMAFSINQLYLYVMSERQVTRVPVE 479 (539)
T ss_dssp TEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCT---TCCCCCSCCEECTTSSEEEEECSSEEEEEESC
T ss_pred CeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeec---CCCccccceEEccCCCeEEEEeccccceeehh
Confidence 44568888899987655443221 122222211 123674 8999999999998877766655554
No 396
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=22.47 E-value=2.8e+02 Score=23.28 Aligned_cols=60 Identities=12% Similarity=0.080 Sum_probs=35.1
Q ss_pred cEEEEEeCCCCEEEEEcC-CCe-------eeEEeecccccccccceEEEEECCCCcEEEEEcCCeEEEEEc
Q 022019 139 CVFASTTRDHPIHLWDAT-TGL-------LRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDV 201 (304)
Q Consensus 139 ~~l~~~~~dg~i~i~d~~-~~~-------~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~v~d~ 201 (304)
..++.|..+|.|.=.-+. .+. ....+... ....+|..|.++++..+|+++.+..|.-.-+
T Consensus 422 tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~---~~~~pI~~m~l~~~~~~Lyv~s~~~V~~vpv 489 (495)
T 1q47_A 422 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVF---REPTTISAMELSTKQQQLYIGSTAGVAQLPL 489 (495)
T ss_dssp EEEEEEETTSCEEEEECC-----------CCEEECCS---SSCCCCCEEEEETTTTEEEEEBSSCEEEEES
T ss_pred EEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeec---CCCCccceEEEcCCCCEEEEEECCeEEEEEH
Confidence 458888999987544332 221 11222221 1123789999999999999875555544333
No 397
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=20.38 E-value=3.3e+02 Score=21.65 Aligned_cols=215 Identities=11% Similarity=0.041 Sum_probs=98.3
Q ss_pred ceeEEEEcCCCCeEEEecCCCeEEEeeCCCCCCccccccccccccCCccceEEEeecCCeEEEEeecCccceeCCCccEE
Q 022019 62 FLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVF 141 (304)
Q Consensus 62 ~V~~i~~s~~~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l 141 (304)
.+..++.+....+.+.-..||.|..|-.............. ......+....+..|..++- ...+.
T Consensus 106 ~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~-----~~~p~~v~~l~~~~i~~va~---------G~~hs 171 (389)
T 3kci_A 106 FIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP-----CDRPRVIESLRGIEVVDVAA---------GGAHS 171 (389)
T ss_dssp CEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSSSCCC-----EEEEEECGGGTTSCEEEEEE---------CSSEE
T ss_pred ceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCCCCcc-----CcCCeEecccCCCeEEEEEe---------CcCeE
Confidence 35556676656666666789999999654321110000000 00000000011123444432 33455
Q ss_pred EEEeCCCCEEEEEcCC-Ce-------eeEEeecccccccccceEEEEECCC-CcEEEEEcCCeEEEEEcCCCCccc----
Q 022019 142 ASTTRDHPIHLWDATT-GL-------LRCTYRAYDAVDEITAAFSVAFNPT-GTKIFAGYNKSVRVFDVHRPGRDF---- 208 (304)
Q Consensus 142 ~~~~~dg~i~i~d~~~-~~-------~~~~~~~~~~~~~~~~v~~i~~~~~-~~~l~~~~d~~i~v~d~~~~~~~~---- 208 (304)
+....+|.|+.|=... ++ .......... .....|..++.-.. ...++...+|.|+.|-....+...
T Consensus 172 ~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~-~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~ 250 (389)
T 3kci_A 172 ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGS 250 (389)
T ss_dssp EEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGG-GTTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSC
T ss_pred EEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecc-cCCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCC
Confidence 5666789999996432 11 0000000000 11125666766542 334446689999999754321100
Q ss_pred eeeeeeeccccccccceeEEEeecCCCcEEEEEecCCeEEEEecCCc-----------eEeEEeccc-cCCeEEEEECCC
Q 022019 209 EKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM-----------ELLYVLHGQ-EGGVTHVQFSRD 276 (304)
Q Consensus 209 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~i~d~~~~-----------~~~~~~~~~-~~~v~~~~~~~~ 276 (304)
.....+..........|..++.. ....++-..+|.|+.|=.... .....+... ...|..++-...
T Consensus 251 ~~~~~p~~v~~~~~~~v~~v~~G---~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~ia~G~~ 327 (389)
T 3kci_A 251 DGCKVPMKIDSLTGLGVVKVECG---SQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSL 327 (389)
T ss_dssp CCEEEEEECGGGTTSCEEEEEEE---TTEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEECSS
T ss_pred CCccccEEecccCCCcEEEEeCC---CCEEEEEeCCCeEEEEeCCCCCCCCCCCCccccCCeEeccCCCCCEEEEEeccC
Confidence 00001111001111235555543 334555678999999954211 111222211 235666666433
Q ss_pred CcEEEEeeccCCeEEEEeccc
Q 022019 277 GNYLYTGGRKDPYILCWDLRK 297 (304)
Q Consensus 277 ~~~l~~~~~~d~~i~vwd~~~ 297 (304)
..++.. .||.|+.|-...
T Consensus 328 --h~~al~-~~G~v~~wG~n~ 345 (389)
T 3kci_A 328 --HCVCCT-EDGEVYTWGDND 345 (389)
T ss_dssp --EEEEEE-TTCCEEEEECCT
T ss_pred --eEEEEC-CCCCEEEeeCCC
Confidence 333345 688888886543
Done!