Query 022020
Match_columns 304
No_of_seqs 145 out of 1142
Neff 8.7
Searched_HMMs 46136
Date Fri Mar 29 07:24:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022020.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022020hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03002 oxidoreductase, 2OG-F 100.0 8.6E-74 1.9E-78 521.5 31.3 289 12-304 12-304 (332)
2 PTZ00273 oxidase reductase; Pr 100.0 7.9E-72 1.7E-76 507.7 28.6 279 12-304 3-295 (320)
3 COG3491 PcbC Isopenicillin N s 100.0 1.3E-71 2.9E-76 481.5 27.3 276 11-304 2-293 (322)
4 PLN02254 gibberellin 3-beta-di 100.0 3E-70 6.4E-75 501.4 25.8 265 12-304 54-328 (358)
5 PLN02997 flavonol synthase 100.0 5.9E-70 1.3E-74 493.8 27.4 265 12-304 30-300 (325)
6 PLN02750 oxidoreductase, 2OG-F 100.0 9.5E-70 2.1E-74 497.7 27.5 275 12-304 24-312 (345)
7 PLN02485 oxidoreductase 100.0 3.5E-69 7.6E-74 491.8 28.8 281 9-304 2-309 (329)
8 PLN02276 gibberellin 20-oxidas 100.0 2.3E-69 5E-74 497.2 26.8 275 12-304 38-323 (361)
9 PLN02515 naringenin,2-oxogluta 100.0 8.1E-69 1.8E-73 491.9 27.9 268 13-304 36-313 (358)
10 PLN02216 protein SRG1 100.0 6.4E-69 1.4E-73 493.2 25.8 267 13-304 51-328 (357)
11 PLN02758 oxidoreductase, 2OG-F 100.0 7.4E-69 1.6E-73 493.5 26.2 269 11-304 49-330 (361)
12 PLN02639 oxidoreductase, 2OG-F 100.0 2.7E-68 5.8E-73 486.6 26.8 267 11-304 34-308 (337)
13 PLN02156 gibberellin 2-beta-di 100.0 7.3E-68 1.6E-72 481.1 26.3 268 13-304 25-298 (335)
14 PLN02704 flavonol synthase 100.0 4.2E-68 9E-73 485.0 24.6 269 11-304 39-316 (335)
15 PLN00417 oxidoreductase, 2OG-F 100.0 1E-67 2.3E-72 483.6 26.2 267 13-304 43-321 (348)
16 PLN02912 oxidoreductase, 2OG-F 100.0 1.3E-67 2.9E-72 483.0 26.3 263 12-301 39-311 (348)
17 PLN02904 oxidoreductase 100.0 1.7E-67 3.8E-72 483.4 27.1 269 13-304 50-325 (357)
18 PLN03178 leucoanthocyanidin di 100.0 1E-67 2.2E-72 486.5 25.0 268 12-304 45-329 (360)
19 PLN02393 leucoanthocyanidin di 100.0 1.8E-67 3.9E-72 484.8 25.7 268 11-304 48-331 (362)
20 PLN02947 oxidoreductase 100.0 1.7E-67 3.7E-72 485.3 24.8 268 11-304 63-342 (374)
21 PLN02299 1-aminocyclopropane-1 100.0 7.5E-67 1.6E-71 473.1 25.6 260 11-300 3-272 (321)
22 PLN02365 2-oxoglutarate-depend 100.0 8.5E-66 1.8E-70 463.1 26.3 259 13-304 4-269 (300)
23 KOG0143 Iron/ascorbate family 100.0 2.6E-65 5.6E-70 461.6 26.4 269 11-304 14-294 (322)
24 PLN02403 aminocyclopropanecarb 100.0 4.5E-64 9.7E-69 450.8 25.5 254 14-298 2-266 (303)
25 PLN02984 oxidoreductase, 2OG-F 100.0 4E-63 8.6E-68 451.1 25.9 259 11-292 35-306 (341)
26 PLN03001 oxidoreductase, 2OG-F 100.0 2.5E-56 5.5E-61 392.8 18.8 225 57-304 1-233 (262)
27 PF14226 DIOX_N: non-haem diox 99.9 6.7E-26 1.5E-30 176.4 5.1 111 15-131 1-116 (116)
28 PF03171 2OG-FeII_Oxy: 2OG-Fe( 99.9 3.2E-24 6.9E-29 161.9 8.5 93 181-284 2-98 (98)
29 PLN03176 flavanone-3-hydroxyla 99.8 4.4E-18 9.5E-23 132.3 9.0 73 13-85 36-115 (120)
30 PF13640 2OG-FeII_Oxy_3: 2OG-F 96.5 0.004 8.7E-08 46.4 4.1 80 183-283 1-100 (100)
31 PRK05467 Fe(II)-dependent oxyg 95.3 0.16 3.4E-06 43.9 9.3 46 220-282 129-176 (226)
32 PF12851 Tet_JBP: Oxygenase do 95.2 0.3 6.6E-06 40.3 10.4 66 201-283 85-170 (171)
33 smart00702 P4Hc Prolyl 4-hydro 94.7 0.52 1.1E-05 38.9 10.7 82 181-283 83-178 (178)
34 PRK15401 alpha-ketoglutarate-d 93.4 1.8 4E-05 37.0 11.6 86 182-281 117-211 (213)
35 PF13532 2OG-FeII_Oxy_2: 2OG-F 88.8 2.4 5.1E-05 35.3 7.8 85 182-280 98-193 (194)
36 TIGR02466 conserved hypothetic 87.7 8.5 0.00019 32.6 10.4 36 235-282 160-198 (201)
37 PRK08130 putative aldolase; Va 82.7 1.7 3.6E-05 37.2 3.9 38 13-50 126-163 (213)
38 PRK08333 L-fuculose phosphate 82.6 1.7 3.7E-05 36.3 3.8 38 13-50 119-156 (184)
39 PF13759 2OG-FeII_Oxy_5: Putat 78.5 3.4 7.4E-05 30.6 3.9 35 234-280 63-100 (101)
40 PRK05874 L-fuculose-phosphate 76.9 3 6.4E-05 35.9 3.6 37 14-50 127-163 (217)
41 TIGR00568 alkb DNA alkylation 73.6 30 0.00065 28.5 8.5 62 182-253 96-162 (169)
42 PRK06833 L-fuculose phosphate 72.7 4.4 9.4E-05 34.7 3.6 50 13-62 123-174 (214)
43 PRK08660 L-fuculose phosphate 71.6 5.3 0.00011 33.1 3.7 37 13-50 114-150 (181)
44 PRK06755 hypothetical protein; 70.5 5.7 0.00012 33.9 3.7 37 14-50 136-172 (209)
45 PRK08087 L-fuculose phosphate 70.2 5.5 0.00012 34.1 3.7 37 14-50 122-158 (215)
46 PF00596 Aldolase_II: Class II 69.2 2.9 6.3E-05 34.6 1.7 38 13-50 122-160 (184)
47 PRK03634 rhamnulose-1-phosphat 68.2 6 0.00013 35.3 3.6 50 13-62 178-229 (274)
48 PF07350 DUF1479: Protein of u 67.1 4.8 0.0001 37.9 2.8 55 11-66 46-100 (416)
49 TIGR02624 rhamnu_1P_ald rhamnu 63.9 12 0.00025 33.4 4.5 38 13-50 176-213 (270)
50 TIGR01086 fucA L-fuculose phos 63.0 8.4 0.00018 32.9 3.4 37 14-50 121-157 (214)
51 PRK06357 hypothetical protein; 63.0 10 0.00023 32.5 3.9 38 13-50 129-172 (216)
52 PRK06557 L-ribulose-5-phosphat 62.0 8 0.00017 33.2 3.1 49 13-61 129-181 (221)
53 TIGR03328 salvage_mtnB methylt 60.4 11 0.00025 31.5 3.7 36 14-50 126-164 (193)
54 cd00398 Aldolase_II Class II A 58.1 8.3 0.00018 32.7 2.5 38 13-50 121-160 (209)
55 TIGR02409 carnitine_bodg gamma 55.8 16 0.00035 33.9 4.2 52 11-65 106-158 (366)
56 PRK06754 mtnB methylthioribulo 52.6 16 0.00034 31.1 3.2 36 14-50 137-173 (208)
57 PRK07490 hypothetical protein; 51.4 16 0.00036 31.9 3.3 38 13-50 132-170 (245)
58 PRK09553 tauD taurine dioxygen 49.6 29 0.00063 30.8 4.7 54 11-67 12-65 (277)
59 PRK06661 hypothetical protein; 45.4 24 0.00051 30.6 3.3 37 14-50 123-161 (231)
60 COG2140 Thermophilic glucose-6 44.4 60 0.0013 27.7 5.4 70 179-258 88-157 (209)
61 PLN00052 prolyl 4-hydroxylase; 40.5 2E+02 0.0044 26.2 8.6 45 237-285 206-253 (310)
62 PRK09220 methylthioribulose-1- 38.4 40 0.00087 28.5 3.6 48 14-62 134-186 (204)
63 PF01471 PG_binding_1: Putativ 37.4 29 0.00063 22.4 2.1 42 28-69 4-45 (57)
64 cd00379 Ribosomal_L10_P0 Ribos 35.5 1.3E+02 0.0028 23.9 6.0 39 25-63 3-42 (155)
65 PRK05834 hypothetical protein; 35.3 48 0.001 27.9 3.5 37 14-50 121-161 (194)
66 COG3128 PiuC Uncharacterized i 35.2 2E+02 0.0043 24.2 6.9 35 236-282 143-179 (229)
67 PRK08193 araD L-ribulose-5-pho 32.5 62 0.0013 28.0 3.9 38 13-50 123-173 (231)
68 COG3695 Predicted methylated D 32.1 16 0.00036 27.2 0.2 29 249-278 41-69 (103)
69 TIGR02410 carnitine_TMLD trime 32.0 65 0.0014 29.9 4.2 50 13-65 99-150 (362)
70 COG1402 Uncharacterized protei 31.4 1.5E+02 0.0033 26.1 6.0 43 23-65 86-131 (250)
71 PRK07044 aldolase II superfami 31.0 60 0.0013 28.5 3.6 37 14-50 138-175 (252)
72 PF11243 DUF3045: Protein of u 30.2 48 0.001 23.4 2.2 21 30-50 36-56 (89)
73 COG0289 DapB Dihydrodipicolina 30.0 1.3E+02 0.0029 26.6 5.4 44 17-63 73-117 (266)
74 PRK06486 hypothetical protein; 27.9 67 0.0014 28.4 3.3 37 14-50 148-186 (262)
75 PRK15331 chaperone protein Sic 26.3 66 0.0014 26.4 2.8 43 24-67 8-50 (165)
76 PF11043 DUF2856: Protein of u 26.2 92 0.002 22.1 3.1 24 51-74 20-43 (97)
77 cd05797 Ribosomal_L10 Ribosoma 26.0 2.2E+02 0.0047 22.7 5.8 40 24-63 4-44 (157)
78 PF03460 NIR_SIR_ferr: Nitrite 25.1 1.1E+02 0.0025 20.4 3.5 38 26-63 23-68 (69)
79 PF01113 DapB_N: Dihydrodipico 24.0 1E+02 0.0022 23.6 3.4 43 17-62 71-114 (124)
80 PRK00099 rplJ 50S ribosomal pr 23.2 2.7E+02 0.0059 22.6 6.0 40 24-63 5-45 (172)
81 PRK08324 short chain dehydroge 22.6 2.5E+02 0.0054 28.5 6.7 37 13-50 154-193 (681)
82 TIGR00760 araD L-ribulose-5-ph 22.2 1.1E+02 0.0025 26.3 3.7 38 13-50 124-174 (231)
83 PF12368 DUF3650: Protein of u 22.2 39 0.00086 18.9 0.5 17 42-58 9-25 (28)
84 PF01361 Tautomerase: Tautomer 21.9 1E+02 0.0022 20.0 2.6 26 146-171 14-39 (60)
85 COG3145 AlkB Alkylated DNA rep 21.5 5E+02 0.011 21.9 7.6 62 182-253 107-173 (194)
86 PRK02289 4-oxalocrotonate taut 20.9 1.3E+02 0.0028 19.7 3.0 26 146-171 15-40 (60)
87 cd00491 4Oxalocrotonate_Tautom 20.4 1.4E+02 0.0031 18.9 3.1 27 145-171 13-39 (58)
88 TIGR01573 cas2 CRISPR-associat 20.2 1E+02 0.0022 22.5 2.6 48 18-65 7-59 (95)
No 1
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=8.6e-74 Score=521.47 Aligned_cols=289 Identities=54% Similarity=0.932 Sum_probs=248.1
Q ss_pred CCCCceeeCCCcchHHHHHHHHHHHHhcceEEEEecCCChHHHHHHHHHHHHHhcCCHHHHhhhhhc-CCCCcccCCccc
Q 022020 12 SAALNCIDLSDPDIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFELPFDEKMKLWVE-RNRGYKQPLKNQ 90 (304)
Q Consensus 12 ~~~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~GY~~~~~e~ 90 (304)
..+||+|||+...+..++++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++... .++||.+.+.+
T Consensus 12 ~~~iP~IDl~~~~~~~~~~~l~~Ac~~~GFf~l~nHGI~~~l~~~~~~~~~~FF~LP~e~K~k~~~~~~~~GY~~~~~e- 90 (332)
T PLN03002 12 VSSLNCIDLANDDLNHSVASLKQACLDCGFFYVINHGINEEFMDDVFEQSKKFFALPLEEKMKVLRNEKHRGYTPVLDE- 90 (332)
T ss_pred CCCCCEEeCCchhHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHHcCCHHHHHhhccCCCCCCcCccccc-
Confidence 4589999998766777899999999999999999999999999999999999999999999999766 78999988776
Q ss_pred ccccccccCccc-chhhhcCCC-CCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCc
Q 022020 91 FFDQETNQQAHG-EAYSLVGPE-TEDDLDPEKPLCGPNVWPSADVLPGWKETMLRYQQEALNLGRKIGRIIALALDLDVD 168 (304)
Q Consensus 91 ~~~~~~~~~~d~-E~~~~~~~~-~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~ 168 (304)
..+.......|+ |.|. ++.+ |.+++.......++|.||+.+.+|+||+++++|+++|.+|+..||++|+++||++++
T Consensus 91 ~~~~~~~~~~d~kE~f~-~~~~~p~~~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~ 169 (332)
T PLN03002 91 KLDPKNQINGDHKEGYY-IGIEVPKDDPHWDKPFYGPNPWPDADVLPGWRETMEKYHQEALRVSMAIAKLLALALDLDVG 169 (332)
T ss_pred ccccccCCCCcceeeeE-ecccCCCCCccccccccCCCCCcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChH
Confidence 443221123688 9998 8765 444332222345789999864578999999999999999999999999999999999
Q ss_pred ccCCCcccCCCcceEEEEecCCCCCCCCcccccccccccCCCceeEEeeCCCCceeEEeCCCCCCCceEEccCCCCeEEE
Q 022020 169 FFGKPEILGNAMPYVSFNHYGVQDADPSKEYILGTPAHSDPSLITLLATDEVPGLQICRNIHANPRVWENVVPLKDAFIV 248 (304)
Q Consensus 169 ~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~~HtD~~~lTll~~d~~~GLqv~~~~~~~~~~W~~v~~~~g~~iV 248 (304)
+|.+...+..+.+.||++|||+++.. .. ..+|+++|||+|+||||+||+++||||+.++...+|+|++|+|+||++||
T Consensus 170 ~f~~~~~~~~~~~~lrl~~YP~~~~~-~~-~~~g~~~HTD~g~lTlL~qd~v~GLQV~~~~~~~~g~Wi~Vpp~pg~~VV 247 (332)
T PLN03002 170 YFDRTEMLGKPIATMRLLRYQGISDP-SK-GIYACGAHSDFGMMTLLATDGVMGLQICKDKNAMPQKWEYVPPIKGAFIV 247 (332)
T ss_pred HhccccccCCCchheeeeeCCCCCCc-cc-CccccccccCCCeEEEEeeCCCCceEEecCCCCCCCcEEECCCCCCeEEE
Confidence 99832245666789999999998753 22 57999999999999999999999999987642123789999999999999
Q ss_pred EcchhHHHHhCCcccccccccC-CCCceeEEEeeecCCCCceeecCCCCCCCCCCCC
Q 022020 249 NIGDMLERMSNCVFRSTMHRVL-FRQERYTIAYFVYPSNDAMIECFPTCKSEEKPPK 304 (304)
Q Consensus 249 n~Gd~l~~~T~G~~~s~~HRV~-~~~~R~S~~~f~~p~~d~~i~p~~~~~~~~~p~~ 304 (304)
|+||+|++||||+|+|++|||+ ++.+|||++||+.|+.|++|.|+++|+++++|++
T Consensus 248 NiGD~L~~wTng~~kSt~HRVv~~~~~R~Sia~F~~p~~d~~i~pl~~~~~~~~p~~ 304 (332)
T PLN03002 248 NLGDMLERWSNGFFKSTLHRVLGNGQERYSIPFFVEPNHDCLVECLPTCKSESDLPK 304 (332)
T ss_pred EHHHHHHHHhCCeeECcCCeecCCCCCeeEEEEEecCCCCeeEecCCcccCCCCccc
Confidence 9999999999999999999999 8789999999999999999999999999988864
No 2
>PTZ00273 oxidase reductase; Provisional
Probab=100.00 E-value=7.9e-72 Score=507.67 Aligned_cols=279 Identities=35% Similarity=0.602 Sum_probs=245.3
Q ss_pred CCCCceeeCCC------cchHHHHHHHHHHHHhcceEEEEecCCChHHHHHHHHHHHHHhcCCHHHHhhhhhc---CCCC
Q 022020 12 SAALNCIDLSD------PDIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFELPFDEKMKLWVE---RNRG 82 (304)
Q Consensus 12 ~~~iPvIDl~~------~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~---~~~G 82 (304)
.++||||||+. ..+.+++++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++... ..+|
T Consensus 3 ~~~iPvIDl~~~~~~~~~~~~~~~~~l~~A~~~~Gff~v~nhgi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~~G 82 (320)
T PTZ00273 3 RASLPVIDVSPLFGGESAEKMRVAKQIDEACRTWGFFYIVGHPIPQERIEKVLKMAKTFFSLPMEEKLKIDIRKSRLHRG 82 (320)
T ss_pred CCCCCEEecHHhcCCChHHHHHHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccCCCCCCCC
Confidence 45899999952 24567899999999999999999999999999999999999999999999998543 5789
Q ss_pred cccCCcccccccccccCccc-chhhhcCCC-CCCCCC--CCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHH
Q 022020 83 YKQPLKNQFFDQETNQQAHG-EAYSLVGPE-TEDDLD--PEKPLCGPNVWPSADVLPGWKETMLRYQQEALNLGRKIGRI 158 (304)
Q Consensus 83 Y~~~~~e~~~~~~~~~~~d~-E~~~~~~~~-~~~~~~--~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~la~~ll~~ 158 (304)
|.+.+.+ ..... ...|+ |+|. ++.. +.+++. ......++|.||+. +|+|++++++|+++|.+++..|+++
T Consensus 83 Y~~~~~e-~~~~~--~~~d~kE~~~-~~~~~~~~~~~~~~~~~~~~~n~wP~~--~p~fr~~~~~y~~~~~~l~~~ll~~ 156 (320)
T PTZ00273 83 YGAFGAE-QLDPS--KPYDYKETFD-MGCHLPKDHPDVMAGKPLRGPNNHPTQ--VEGWMELMETHYRDMQALALVLLRA 156 (320)
T ss_pred CCCcccc-ccCCC--CCCCccceEE-eeccCCcccchhhccccccCCCCCCCc--chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998876 44333 56688 9999 8754 433322 12234678999976 7899999999999999999999999
Q ss_pred HHHhCCCCCcccCCCcccCCCcceEEEEecCCCCCCCCcccccccccccCCCceeEEeeCCCCceeEEeCCCCCCCceEE
Q 022020 159 IALALDLDVDFFGKPEILGNAMPYVSFNHYGVQDADPSKEYILGTPAHSDPSLITLLATDEVPGLQICRNIHANPRVWEN 238 (304)
Q Consensus 159 l~~~Lgl~~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~~HtD~~~lTll~~d~~~GLqv~~~~~~~~~~W~~ 238 (304)
|+++||+++++|. +.+..+.+.||++|||+++..+. ..+|+++|||+|+||||+||.++||||+..+ |+|++
T Consensus 157 la~~Lgl~~~~f~--~~~~~~~~~lrl~~YP~~~~~~~--~~~g~~~HTD~g~lTlL~qd~~~GLqV~~~~----g~Wi~ 228 (320)
T PTZ00273 157 LALAIGLREDFFD--SKFMEPLSVFRMKHYPALPQTKK--GRTVCGEHTDYGIITLLYQDSVGGLQVRNLS----GEWMD 228 (320)
T ss_pred HHHHhCcCHHHHH--HhhCCCcceeeeeecCCCCCccc--cCcccccccCCCeEEEEecCCCCceEEECCC----CCEEe
Confidence 9999999999998 77788889999999999875432 6899999999999999999999999999865 67999
Q ss_pred ccCCCCeEEEEcchhHHHHhCCcccccccccC-CCCceeEEEeeecCCCCceeecCCCCCCCCCCCC
Q 022020 239 VVPLKDAFIVNIGDMLERMSNCVFRSTMHRVL-FRQERYTIAYFVYPSNDAMIECFPTCKSEEKPPK 304 (304)
Q Consensus 239 v~~~~g~~iVn~Gd~l~~~T~G~~~s~~HRV~-~~~~R~S~~~f~~p~~d~~i~p~~~~~~~~~p~~ 304 (304)
|+|.||++|||+||+|++||||+|||++|||+ ++.+|||++||+.|+.|++|.|+++|+++++|++
T Consensus 229 V~p~pg~lvVNvGD~l~~~TnG~~kSt~HRVv~~~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~~~ 295 (320)
T PTZ00273 229 VPPLEGSFVVNIGDMMEMWSNGRYRSTPHRVVNTGVERYSMPFFCEPNPNVIIKCLDNCHSEENPPK 295 (320)
T ss_pred CCCCCCeEEEEHHHHHHHHHCCeeeCCCccccCCCCCeEEEEEEEcCCCCceEecCccccCCCCccc
Confidence 99999999999999999999999999999999 8889999999999999999999999999988764
No 3
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only]
Probab=100.00 E-value=1.3e-71 Score=481.45 Aligned_cols=276 Identities=37% Similarity=0.646 Sum_probs=246.9
Q ss_pred cCCCCceeeCC------CcchHHHHHHHHHHHHhcceEEEEecCCChHHHHHHHHHHHHHhcCCHHHHhhhhhc---CCC
Q 022020 11 VSAALNCIDLS------DPDIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFELPFDEKMKLWVE---RNR 81 (304)
Q Consensus 11 ~~~~iPvIDl~------~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~---~~~ 81 (304)
++..||+|||+ +.++..++++|++||+++|||||+||||+..++++++++++.||+||.|+|.++... ..+
T Consensus 2 ~~~~lp~idls~~~~~~~~~~~~~~~~l~~A~r~~GFf~l~~~~i~~~~~~~~~~~arqFFaLp~eeK~~~~~~~~~~~r 81 (322)
T COG3491 2 STRDLPIIDLSELAGSDPGARRRVAQELRAACREIGFFYLVNHGIDAALIDEAFALARQFFALPVEEKLKILMVLGRQHR 81 (322)
T ss_pred CCCcCceeccHHhcCCCcHHHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHhcCcccc
Confidence 46789999995 236788999999999999999999999999999999999999999999999999877 689
Q ss_pred CcccCCcccccccccccCccc-chhhhcCCC-CCCCCC--CCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHH
Q 022020 82 GYKQPLKNQFFDQETNQQAHG-EAYSLVGPE-TEDDLD--PEKPLCGPNVWPSADVLPGWKETMLRYQQEALNLGRKIGR 157 (304)
Q Consensus 82 GY~~~~~e~~~~~~~~~~~d~-E~~~~~~~~-~~~~~~--~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~la~~ll~ 157 (304)
||.+.+.| ..+ +..|| |.+. ++.+ +...+. +..+.+++|.|| . +|+||+.+.+|+++|.+++.+||+
T Consensus 82 GY~~~~~E-~t~----g~~d~kE~~d-~g~~~~~~~~~~~~~~~~~gpN~wP-~--ip~~r~~ll~~~~~~~~~~~rLL~ 152 (322)
T COG3491 82 GYTPHGGE-LTD----GEPDYKEGLD-MGPDLDAELAGVRAGTPLHGPNLWP-A--IPGLRDALLQYYRAMTAVGLRLLR 152 (322)
T ss_pred ccccCccc-ccC----Cccchhhhcc-cccccccccCCCccCCCcCCCCCCc-c--chhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988 544 55699 9999 9987 533333 334778999999 4 899999999999999999999999
Q ss_pred HHHHhCCCCCcccCCCcccCCCcceEEEEecCCCCCCCCcccccccccccCCCceeEEeeCCCCceeEEeCCCCCCCceE
Q 022020 158 IIALALDLDVDFFGKPEILGNAMPYVSFNHYGVQDADPSKEYILGTPAHSDPSLITLLATDEVPGLQICRNIHANPRVWE 237 (304)
Q Consensus 158 ~l~~~Lgl~~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~~HtD~~~lTll~~d~~~GLqv~~~~~~~~~~W~ 237 (304)
+||.+|+|++++|+ ..+.++.+.||+++||+.+... +..+.|+|||+|+||||+||.++||||+++. |+|+
T Consensus 153 aiA~~LdL~~d~Fd--~~~~d~~~~~RLlrYP~~~~~~---~~~~~GaHtD~G~lTLl~Qd~~~GLqv~~~~----g~Wl 223 (322)
T COG3491 153 AIALGLDLPEDFFD--KRTSDPNSVLRLLRYPSRPARE---GADGVGAHTDYGLLTLLFQDDVGGLEVRPPN----GGWL 223 (322)
T ss_pred HHHHHcCCChhhhh--hccCCchheEEEEecCCCcccc---cccccccccCCCeEEEEEecccCCeEEecCC----CCee
Confidence 99999999999999 7799999999999999877543 6678899999999999999999999999996 6799
Q ss_pred EccCCCCeEEEEcchhHHHHhCCcccccccccC-C-CCceeEEEeeecCCCCceeecCC-CCCCCCCCCC
Q 022020 238 NVVPLKDAFIVNIGDMLERMSNCVFRSTMHRVL-F-RQERYTIAYFVYPSNDAMIECFP-TCKSEEKPPK 304 (304)
Q Consensus 238 ~v~~~~g~~iVn~Gd~l~~~T~G~~~s~~HRV~-~-~~~R~S~~~f~~p~~d~~i~p~~-~~~~~~~p~~ 304 (304)
+|+|.||++||||||+||+||||+|+||+|||+ | +.+||||+||+.|+.|+.|.|+. .+.+.+++++
T Consensus 224 ~v~P~pgtlvVNiGdmLe~~Tng~lrST~HRV~~~~~~~R~SipfF~~p~~Da~I~Pl~~l~~~~a~~~~ 293 (322)
T COG3491 224 DVPPIPGTLVVNIGDMLERWTNGRLRSTVHRVRNPPGVDRYSIPFFLEPNFDAEIAPLLPLCPEAANEPR 293 (322)
T ss_pred ECCCCCCeEEEeHHHHHHHHhCCeeccccceeecCCCccceeeeeeccCCCCccccccCCCCcccccCCc
Confidence 999999999999999999999999999999999 4 66999999999999999999866 5556556543
No 4
>PLN02254 gibberellin 3-beta-dioxygenase
Probab=100.00 E-value=3e-70 Score=501.40 Aligned_cols=265 Identities=28% Similarity=0.464 Sum_probs=231.3
Q ss_pred CCCCceeeCCCcchHHHHHHHHHHHHhcceEEEEecCCChHHHHHHHHHHHHHhcCCHHHHhhhhhc--CCCCcccCCcc
Q 022020 12 SAALNCIDLSDPDIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFELPFDEKMKLWVE--RNRGYKQPLKN 89 (304)
Q Consensus 12 ~~~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~--~~~GY~~~~~e 89 (304)
..+||||||+.. .++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... .++||......
T Consensus 54 ~~~iPvIDl~~~---~~~~~l~~Ac~~~GFF~vvnHGI~~~l~~~~~~~~~~FF~LP~EeK~k~~~~~~~~~Gy~~~~~~ 130 (358)
T PLN02254 54 DESIPVIDLSDP---NALTLIGHACETWGVFQVTNHGIPLSLLDDIESQTRRLFSLPAQRKLKAARSPDGVSGYGVARIS 130 (358)
T ss_pred CCCCCeEeCCCH---HHHHHHHHHHHHCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHhhccCCCCcccccccccc
Confidence 357999999753 4789999999999999999999999999999999999999999999998765 56788664433
Q ss_pred cccccccccCccc-chhhhcCCCCCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCc
Q 022020 90 QFFDQETNQQAHG-EAYSLVGPETEDDLDPEKPLCGPNVWPSADVLPGWKETMLRYQQEALNLGRKIGRIIALALDLDVD 168 (304)
Q Consensus 90 ~~~~~~~~~~~d~-E~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~ 168 (304)
.. . .+.|| |.|. +...|.. ..+|.||+. +++||+++++|+++|.+|+.+||++|+++||++++
T Consensus 131 -~~--~--~~~~w~e~~~-~~~~p~~--------~~~~~wP~~--~~~fr~~~~~Y~~~~~~L~~~ll~~la~~Lgl~~~ 194 (358)
T PLN02254 131 -SF--F--NKKMWSEGFT-IMGSPLE--------HARQLWPQD--HTKFCDVMEEYQKEMKKLAERLMWLMLGSLGITEE 194 (358)
T ss_pred -cc--c--CCCCceeeEE-eecCccc--------cchhhCCCC--chHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 11 1 45678 9998 7533221 246899987 68999999999999999999999999999999988
Q ss_pred ccCCCccc-----CCCcceEEEEecCCCCCCCCcccccccccccCCCceeEEeeCCCCceeEEeCCCCCCCceEEccCCC
Q 022020 169 FFGKPEIL-----GNAMPYVSFNHYGVQDADPSKEYILGTPAHSDPSLITLLATDEVPGLQICRNIHANPRVWENVVPLK 243 (304)
Q Consensus 169 ~~~~~~~~-----~~~~~~lr~~~Yp~~~~~~~~~~~~~~~~HtD~~~lTll~~d~~~GLqv~~~~~~~~~~W~~v~~~~ 243 (304)
+|. ..+ .++.+.||+|||||++.. + ..+|+++|||+|+||||+||+++||||+.++ |+|++|+|+|
T Consensus 195 ~~~--~~~~~~~~~~~~~~lRl~~YPp~p~~-~--~~~G~~~HtD~g~lTiL~Qd~v~GLQV~~~~----~~Wi~V~p~p 265 (358)
T PLN02254 195 DIK--WAGPKSGSQGAQAALQLNSYPVCPDP-D--RAMGLAPHTDSSLLTILYQSNTSGLQVFREG----VGWVTVPPVP 265 (358)
T ss_pred HHH--HHhhcccccCcceeEEEecCCCCCCc-c--cccCcCCccCCCcEEEEecCCCCCceEECCC----CEEEEcccCC
Confidence 886 433 456789999999999753 2 6899999999999999999999999999875 5799999999
Q ss_pred CeEEEEcchhHHHHhCCcccccccccC-C-CCceeEEEeeecCCCCceeecCCCCCCCCCCCC
Q 022020 244 DAFIVNIGDMLERMSNCVFRSTMHRVL-F-RQERYTIAYFVYPSNDAMIECFPTCKSEEKPPK 304 (304)
Q Consensus 244 g~~iVn~Gd~l~~~T~G~~~s~~HRV~-~-~~~R~S~~~f~~p~~d~~i~p~~~~~~~~~p~~ 304 (304)
|++|||+||+||+||||+|||++|||+ + .++|||++||+.|+.|++|.|+++|+++++|++
T Consensus 266 galVVNiGD~lq~~SNg~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~i~pl~~lv~~~~p~~ 328 (358)
T PLN02254 266 GSLVVNVGDLLHILSNGRFPSVLHRAVVNKTRHRISVAYFYGPPSDVQISPLPKLVDPNHPPL 328 (358)
T ss_pred CCEEEEhHHHHHHHhCCeeccccceeecCCCCCEEEEEEEecCCCCcEEeCcHHhcCCCCCcc
Confidence 999999999999999999999999999 5 579999999999999999999999999988864
No 5
>PLN02997 flavonol synthase
Probab=100.00 E-value=5.9e-70 Score=493.78 Aligned_cols=265 Identities=30% Similarity=0.451 Sum_probs=232.5
Q ss_pred CCCCceeeCCCcchHHHHHHHHHHHHhcceEEEEecCCChHHHHHHHHHHHHHhcCCHHHHhhhhhc-CCCCcccCCccc
Q 022020 12 SAALNCIDLSDPDIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFELPFDEKMKLWVE-RNRGYKQPLKNQ 90 (304)
Q Consensus 12 ~~~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~GY~~~~~e~ 90 (304)
..+||+|||+..+++.++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... .++||.+...+
T Consensus 30 ~~~IPvIDls~~~~~~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~GY~~~~~~- 108 (325)
T PLN02997 30 AVDVPVVDLSVSDEDFLVREVVKASEEWGVFQVVNHGIPTELMRQLQMVGKQFFELPEAEKETVAKEEDFEGYKRNYLG- 108 (325)
T ss_pred CCCCCeEECCCCCHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccCCCccccCccccc-
Confidence 3479999998766778999999999999999999999999999999999999999999999998766 68899875443
Q ss_pred ccccccccCccc-chhhhcCCCCCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcc
Q 022020 91 FFDQETNQQAHG-EAYSLVGPETEDDLDPEKPLCGPNVWPSADVLPGWKETMLRYQQEALNLGRKIGRIIALALDLDVDF 169 (304)
Q Consensus 91 ~~~~~~~~~~d~-E~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~ 169 (304)
+..|+ |.|. ....+.. ....|.||+. +++||+++++|++.|.+|+.+|+++|+++||+++++
T Consensus 109 -------~~~d~~e~~~-~~~~p~~-------~~~~n~wP~~--~~~fr~~~~~y~~~~~~l~~~ll~~ia~~Lgl~~~~ 171 (325)
T PLN02997 109 -------GINNWDEHLF-HRLSPPS-------IINYKYWPKN--PPQYREVTEEYTKHMKRLTEKILGWLSEGLGLPRET 171 (325)
T ss_pred -------CCCCccceeE-eeecCcc-------ccccccCCCC--cchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 55567 7665 4322221 1346899976 689999999999999999999999999999999999
Q ss_pred cCCCcccCC--CcceEEEEecCCCCCCCCcccccccccccCCCceeEEeeCCCCceeEEeCCCCCCCceEEccCCCCeEE
Q 022020 170 FGKPEILGN--AMPYVSFNHYGVQDADPSKEYILGTPAHSDPSLITLLATDEVPGLQICRNIHANPRVWENVVPLKDAFI 247 (304)
Q Consensus 170 ~~~~~~~~~--~~~~lr~~~Yp~~~~~~~~~~~~~~~~HtD~~~lTll~~d~~~GLqv~~~~~~~~~~W~~v~~~~g~~i 247 (304)
|. +.+.. ..+.||++||||++.. + ..+|+++|||+|+||||+||+++||||+.+ |+|++|+|.||++|
T Consensus 172 f~--~~~~~~~~~~~lRl~~YP~~~~~--~-~~~g~~~HTD~g~lTlL~Qd~v~GLQV~~~-----g~Wi~V~p~pgalv 241 (325)
T PLN02997 172 FT--QSIGGETAEYVLRVNFYPPTQDT--E-LVIGAAAHSDMGAIALLIPNEVPGLQAFKD-----EQWLDLNYINSAVV 241 (325)
T ss_pred HH--HHhcCCcccceeeeecCCCCCCc--c-cccCccCccCCCceEEEecCCCCCEEEeEC-----CcEEECCCCCCeEE
Confidence 98 66553 3468999999998753 2 679999999999999999999999999964 56999999999999
Q ss_pred EEcchhHHHHhCCcccccccccC-C-CCceeEEEeeecCCCCceeecCCCCCCCCCCCC
Q 022020 248 VNIGDMLERMSNCVFRSTMHRVL-F-RQERYTIAYFVYPSNDAMIECFPTCKSEEKPPK 304 (304)
Q Consensus 248 Vn~Gd~l~~~T~G~~~s~~HRV~-~-~~~R~S~~~f~~p~~d~~i~p~~~~~~~~~p~~ 304 (304)
||+||+||+||||+|+|++|||+ + ...|||++||+.|+.|+.|.|+++|+++++|++
T Consensus 242 VNiGD~Le~~TNG~~kSt~HRVv~~~~~~R~Si~fF~~P~~d~~i~Plp~~v~~~~p~~ 300 (325)
T PLN02997 242 VIIGDQLMRMTNGRFKNVLHRAKTDKERLRISWPVFVAPRADMSVGPLPELTGDENPPK 300 (325)
T ss_pred EEechHHHHHhCCccccccceeeCCCCCCEEEEEEEecCCCCCeEeCChHHcCCCCCCc
Confidence 99999999999999999999999 5 568999999999999999999999999998864
No 6
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=9.5e-70 Score=497.66 Aligned_cols=275 Identities=31% Similarity=0.491 Sum_probs=236.2
Q ss_pred CCCCceeeCCC---cchHHHHHHHHHHHHhcceEEEEecCCChHHHHHHHHHHHHHhcCCHHHHhhhhhc--CCCCcccC
Q 022020 12 SAALNCIDLSD---PDIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFELPFDEKMKLWVE--RNRGYKQP 86 (304)
Q Consensus 12 ~~~iPvIDl~~---~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~--~~~GY~~~ 86 (304)
..+||+|||+. .++.+++++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++... ..+||...
T Consensus 24 ~~~iPvIDls~~~~~~~~~~~~~l~~Ac~~~GFf~v~nHGi~~~l~~~~~~~~~~FF~LP~eeK~~~~~~~~~~~GY~~~ 103 (345)
T PLN02750 24 DEEIPVIDLSVSTSHDKTEVASKIGEACKKWGFFQVINHGVPSELRQRVEKVAKEFFDQTTEEKRKVKRDEVNPMGYHDS 103 (345)
T ss_pred CCCCCeEECCCCCcccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHhhccCCCCccCcCcc
Confidence 45899999963 35677899999999999999999999999999999999999999999999998655 45799642
Q ss_pred CcccccccccccCccc-chhhhcCCC-CCCCCC-----CCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHH
Q 022020 87 LKNQFFDQETNQQAHG-EAYSLVGPE-TEDDLD-----PEKPLCGPNVWPSADVLPGWKETMLRYQQEALNLGRKIGRII 159 (304)
Q Consensus 87 ~~e~~~~~~~~~~~d~-E~~~~~~~~-~~~~~~-----~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~la~~ll~~l 159 (304)
.. .. +..|+ |.|. ++.. +...+. .......+|.||+. +++||+++++|++.|.+|+..|+++|
T Consensus 104 ~~-----~~--~~~d~kE~~~-~~~~~~~~~p~~~~~~~~~~~~~~n~wP~~--~~~fr~~~~~y~~~~~~l~~~ll~~l 173 (345)
T PLN02750 104 EH-----TK--NIRDWKEVFD-FLVQDPTLVPASPDPEDTELRKLTNQWPQN--PSHFRELCQEYARQVEKLAFKLLELI 173 (345)
T ss_pred cc-----cc--cCCCceeEEE-EeecccccccccccccccccccccccCCCC--cHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 11 45688 9998 7643 221111 00011237999986 68999999999999999999999999
Q ss_pred HHhCCCCCcccCCCcccCCCcceEEEEecCCCCCCCCcccccccccccCCCceeEEeeCCCCceeEEeCCCCCCCceEEc
Q 022020 160 ALALDLDVDFFGKPEILGNAMPYVSFNHYGVQDADPSKEYILGTPAHSDPSLITLLATDEVPGLQICRNIHANPRVWENV 239 (304)
Q Consensus 160 ~~~Lgl~~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~~HtD~~~lTll~~d~~~GLqv~~~~~~~~~~W~~v 239 (304)
+++||+++++|. +.+.+..+.||++||||++.. + ..+|+++|||+|+||||+||+++||||+...+ |+|++|
T Consensus 174 a~~Lgl~~~~f~--~~~~~~~~~lR~~~YPp~~~~--~-~~~g~~~HtD~g~lTlL~qd~v~GLQV~~~~~---g~Wi~V 245 (345)
T PLN02750 174 SLSLGLPADRLN--GYFKDQISFARFNHYPPCPAP--H-LALGVGRHKDGGALTVLAQDDVGGLQISRRSD---GEWIPV 245 (345)
T ss_pred HHHcCCCHHHHH--HHhcCcceEEEEEecCCCCCc--c-cccCcCCCCCCCeEEEEecCCCCceEEeecCC---CeEEEc
Confidence 999999999999 778888899999999998753 2 67999999999999999999999999987432 789999
Q ss_pred cCCCCeEEEEcchhHHHHhCCcccccccccC-C-CCceeEEEeeecCCCCceeecCCCCCCCCCCCC
Q 022020 240 VPLKDAFIVNIGDMLERMSNCVFRSTMHRVL-F-RQERYTIAYFVYPSNDAMIECFPTCKSEEKPPK 304 (304)
Q Consensus 240 ~~~~g~~iVn~Gd~l~~~T~G~~~s~~HRV~-~-~~~R~S~~~f~~p~~d~~i~p~~~~~~~~~p~~ 304 (304)
+|.||++|||+||+|++||||+|+|++|||+ + +++|||++||+.|+.|++|.|+++|+++++|++
T Consensus 246 ~p~pg~~vVNiGD~L~~~Tng~~~St~HRVv~~~~~~R~Si~~F~~P~~d~~i~pl~~~v~~~~p~~ 312 (345)
T PLN02750 246 KPIPDAFIINIGNCMQVWTNDLYWSAEHRVVVNSQKERFSIPFFFFPSHYVNIKPLDELINEQNPPK 312 (345)
T ss_pred cCCCCeEEEEhHHHHHHHhCCeeecccceeccCCCCCEEEEEEeecCCCCCeecCcHHhcCCCCCCc
Confidence 9999999999999999999999999999999 4 679999999999999999999999999988864
No 7
>PLN02485 oxidoreductase
Probab=100.00 E-value=3.5e-69 Score=491.82 Aligned_cols=281 Identities=32% Similarity=0.484 Sum_probs=237.4
Q ss_pred cccCCCCceeeCCCc-------------chHHHHHHHHHHHHhcceEEEEecCCChHHHHHHHHHHHHHhcCCHHHHhhh
Q 022020 9 TKVSAALNCIDLSDP-------------DIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFELPFDEKMKL 75 (304)
Q Consensus 9 ~~~~~~iPvIDl~~~-------------~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~ 75 (304)
|+.-..||||||+.- .+.+++++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++
T Consensus 2 ~~~~~~iPvIDl~~l~~~~~~~~~~~~~~~~~~~~~l~~Ac~~~GFf~l~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~ 81 (329)
T PLN02485 2 ATDFKSIPVIDISPLVAKCDDPDMAEDPDVAEVVRQLDKACRDAGFFYVKGHGISDSLIKKVREVTHEFFELPYEEKLKI 81 (329)
T ss_pred CCCCCCCCeEechhhhccCcccccccchHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHHhh
Confidence 445568999999521 2456899999999999999999999999999999999999999999999998
Q ss_pred hhc---CCCCcccCCcccccccccccCccc-chhhhcCCC-CCCCCC-CCCCCCCCCCCCCCCCcccHHHHHHHHHHHHH
Q 022020 76 WVE---RNRGYKQPLKNQFFDQETNQQAHG-EAYSLVGPE-TEDDLD-PEKPLCGPNVWPSADVLPGWKETMLRYQQEAL 149 (304)
Q Consensus 76 ~~~---~~~GY~~~~~e~~~~~~~~~~~d~-E~~~~~~~~-~~~~~~-~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~ 149 (304)
... .++||.+.+.+ ... +..|+ |.|. ++.+ +..... .......+|.||+. +|+||+.+++|+++|.
T Consensus 82 ~~~~~~~~rGY~~~g~~-~~~----~~~d~~E~~~-~~~~~~~~~~~~~~~~~~~~n~wP~~--~~~fr~~~~~y~~~~~ 153 (329)
T PLN02485 82 KMTPAAGYRGYQRIGEN-VTK----GKPDMHEAID-CYREFKPGKYGDLGKVMEGPNQWPEN--PQEFKALMEEYIKLCT 153 (329)
T ss_pred cccCCCCCCCccccccc-ccC----CCCCcchhhh-hcccCCCCcccccccccCCCCCCCCc--cHHHHHHHHHHHHHHH
Confidence 654 56899987765 321 56788 9998 7653 111111 11234578999986 7899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCcccCCCcc-cCCCcceEEEEecCCCCCCC--CcccccccccccCCCceeEEeeC-CCCceeE
Q 022020 150 NLGRKIGRIIALALDLDVDFFGKPEI-LGNAMPYVSFNHYGVQDADP--SKEYILGTPAHSDPSLITLLATD-EVPGLQI 225 (304)
Q Consensus 150 ~la~~ll~~l~~~Lgl~~~~~~~~~~-~~~~~~~lr~~~Yp~~~~~~--~~~~~~~~~~HtD~~~lTll~~d-~~~GLqv 225 (304)
+++.+||++|+++||+++++|. +. ..++.+.||++|||+++... .+ ..+|+++|||+|+||||+|+ .++||||
T Consensus 154 ~l~~~ll~~~a~~Lgl~~~~f~--~~~~~~~~~~lrl~~YP~~~~~~~~~~-~~~g~~~HTD~g~lTlL~qd~~~~GLqV 230 (329)
T PLN02485 154 DLSRKILRGIALALGGSPDEFE--GKMAGDPFWVMRIIGYPGVSNLNGPPE-NDIGCGAHTDYGLLTLVNQDDDITALQV 230 (329)
T ss_pred HHHHHHHHHHHHHcCCChHHhh--hhhccCccceEEEEeCCCCccccCCcc-cCcccccccCCCeEEEEeccCCCCeeeE
Confidence 9999999999999999998887 54 34567899999999987522 22 68999999999999999997 5899999
Q ss_pred EeCCCCCCCceEEccCCCCeEEEEcchhHHHHhCCcccccccccC-C-CCceeEEEeeecCCCCceeecCCCCCC--CCC
Q 022020 226 CRNIHANPRVWENVVPLKDAFIVNIGDMLERMSNCVFRSTMHRVL-F-RQERYTIAYFVYPSNDAMIECFPTCKS--EEK 301 (304)
Q Consensus 226 ~~~~~~~~~~W~~v~~~~g~~iVn~Gd~l~~~T~G~~~s~~HRV~-~-~~~R~S~~~f~~p~~d~~i~p~~~~~~--~~~ 301 (304)
+..+ |+|++|+|.||++|||+||+|++||||+|+|++|||+ + +.+|||++||++|+.|++|.|+++|++ +++
T Consensus 231 ~~~~----g~Wi~V~p~pg~~vVNiGD~L~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~~ 306 (329)
T PLN02485 231 RNLS----GEWIWAIPIPGTFVCNIGDMLKIWSNGVYQSTLHRVINNSPKYRVCVAFFYETNFDAAVEPLDICKEKRTGG 306 (329)
T ss_pred EcCC----CcEEECCCCCCcEEEEhHHHHHHHHCCEeeCCCceecCCCCCCeEEEEEEecCCCCceeecchhhcccccCC
Confidence 9865 6799999999999999999999999999999999999 5 679999999999999999999999987 566
Q ss_pred CCC
Q 022020 302 PPK 304 (304)
Q Consensus 302 p~~ 304 (304)
|++
T Consensus 307 ~~~ 309 (329)
T PLN02485 307 SQV 309 (329)
T ss_pred CCC
Confidence 653
No 8
>PLN02276 gibberellin 20-oxidase
Probab=100.00 E-value=2.3e-69 Score=497.23 Aligned_cols=275 Identities=26% Similarity=0.456 Sum_probs=237.1
Q ss_pred CCCCceeeCCC------cchHHHHHHHHHHHHhcceEEEEecCCChHHHHHHHHHHHHHhcCCHHHHhhhhhc--CCCCc
Q 022020 12 SAALNCIDLSD------PDIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFELPFDEKMKLWVE--RNRGY 83 (304)
Q Consensus 12 ~~~iPvIDl~~------~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~--~~~GY 83 (304)
..+||+|||+. ..+.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ..+||
T Consensus 38 ~~~iPvIDls~~~~~~~~~~~~~~~~l~~Ac~~~GFF~l~nHGI~~~l~~~~~~~~~~FF~LP~eeK~k~~~~~~~~~GY 117 (361)
T PLN02276 38 ELAVPLIDLGGFLSGDEAATAEAARLVREACLKHGFFQVVNHGVDAALIRAAHEYMDAFFKLPLSEKQRAQRKPGESCGY 117 (361)
T ss_pred CCCCCeEEChhhcCCChHHHHHHHHHHHHHHHHCcEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHhhccCCCCcccc
Confidence 36899999963 23567899999999999999999999999999999999999999999999998655 67899
Q ss_pred ccCCcccccccccccCccc-chhhhcCCCCCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 022020 84 KQPLKNQFFDQETNQQAHG-EAYSLVGPETEDDLDPEKPLCGPNVWPSADVLPGWKETMLRYQQEALNLGRKIGRIIALA 162 (304)
Q Consensus 84 ~~~~~e~~~~~~~~~~~d~-E~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~la~~ll~~l~~~ 162 (304)
.+.+.+ ... ...|+ |.|. ++..+............+|.||.. +++||+.+++|++.|.+++.+||++|+++
T Consensus 118 ~~~~~~-~~~----~~~d~~E~~~-~~~~~~~~~~~~~~~~~~~~~p~~--~~~fr~~~~~y~~~~~~l~~~ll~~la~~ 189 (361)
T PLN02276 118 ASSHTG-RFS----SKLPWKETLS-FGYHADGGSSPVVVDYFKSVLGED--FEQFGKVYQEYCEAMKTLSLKIMELLGIS 189 (361)
T ss_pred CccCcc-ccC----CCCCeeeeEE-EeccCcccccccchhcccccCCcc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 887655 321 44678 9998 875422111111112345788875 68899999999999999999999999999
Q ss_pred CCCCCcccCCCcccCCCcceEEEEecCCCCCCCCcccccccccccCCCceeEEeeCCCCceeEEeCCCCCCCceEEccCC
Q 022020 163 LDLDVDFFGKPEILGNAMPYVSFNHYGVQDADPSKEYILGTPAHSDPSLITLLATDEVPGLQICRNIHANPRVWENVVPL 242 (304)
Q Consensus 163 Lgl~~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~~HtD~~~lTll~~d~~~GLqv~~~~~~~~~~W~~v~~~ 242 (304)
||+++++|. +.+..+.+.||++|||+++.. + ..+|+++|||+|+||||+||.++||||+.. |+|++|+|+
T Consensus 190 Lgl~~~~f~--~~~~~~~~~lrl~~YP~~~~~--~-~~~g~~~HTD~g~lTlL~Qd~v~GLQV~~~-----g~Wi~V~p~ 259 (361)
T PLN02276 190 LGVDRGYYR--KFFEDGDSIMRCNYYPPCQEP--E-LTLGTGPHCDPTSLTILHQDQVGGLQVFVD-----NKWRSVRPR 259 (361)
T ss_pred cCCCHHHHH--HHhcCccceeeeEeCCCCCCc--c-cccCCccccCCceeEEEEecCCCceEEEEC-----CEEEEcCCC
Confidence 999999999 777788899999999998653 2 679999999999999999999999999953 569999999
Q ss_pred CCeEEEEcchhHHHHhCCcccccccccC-C-CCceeEEEeeecCCCCceeecCCCCCCCCCCCC
Q 022020 243 KDAFIVNIGDMLERMSNCVFRSTMHRVL-F-RQERYTIAYFVYPSNDAMIECFPTCKSEEKPPK 304 (304)
Q Consensus 243 ~g~~iVn~Gd~l~~~T~G~~~s~~HRV~-~-~~~R~S~~~f~~p~~d~~i~p~~~~~~~~~p~~ 304 (304)
||++|||+||+|++||||+|+|++|||+ + .++|||++||+.|+.|+.|.|+++|+++++|++
T Consensus 260 pgalVVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~ 323 (361)
T PLN02276 260 PGALVVNIGDTFMALSNGRYKSCLHRAVVNSERERRSLAFFLCPKEDKVVRPPQELVDREGPRK 323 (361)
T ss_pred CCeEEEEcHHHHHHHhCCccccccceeecCCCCCEEEEEEEecCCCCCEEeCChHhcCCCCCCc
Confidence 9999999999999999999999999999 5 679999999999999999999999999988864
No 9
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase
Probab=100.00 E-value=8.1e-69 Score=491.89 Aligned_cols=268 Identities=26% Similarity=0.426 Sum_probs=230.3
Q ss_pred CCCceeeCCC-----cchHHHHHHHHHHHHhcceEEEEecCCChHHHHHHHHHHHHHhcCCHHHHhhhhhc--CCCCccc
Q 022020 13 AALNCIDLSD-----PDIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFELPFDEKMKLWVE--RNRGYKQ 85 (304)
Q Consensus 13 ~~iPvIDl~~-----~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~--~~~GY~~ 85 (304)
.+||+|||+. ..+.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ..+||..
T Consensus 36 ~~iPvIDls~~~~~~~~~~~~~~~l~~Ac~~~GFf~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~Gy~~ 115 (358)
T PLN02515 36 DEIPVISLAGIDEVGGRRGEICRKIVEACEDWGIFQVVDHGVDANLVADMTRLARDFFALPAEEKLRFDMSGGKKGGFIV 115 (358)
T ss_pred CCCCEEEChhccCCchHHHHHHHHHHHHHHHCcEEEEEcCCCCHHHHHHHHHHHHHHhcCCHHHHhhhCcCCCCccCccc
Confidence 4799999963 23677899999999999999999999999999999999999999999999998655 4579963
Q ss_pred CCcccccccccccCccc-chhhhcCCCCCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 022020 86 PLKNQFFDQETNQQAHG-EAYSLVGPETEDDLDPEKPLCGPNVWPSADVLPGWKETMLRYQQEALNLGRKIGRIIALALD 164 (304)
Q Consensus 86 ~~~e~~~~~~~~~~~d~-E~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~la~~ll~~l~~~Lg 164 (304)
.+ ..... ...|| |.|. +...+.. ....|.||+. ++.||+++++|+++|.+|+.+||++|+++||
T Consensus 116 --~~-~~~~~--~~~d~kE~~~-~~~~~~~-------~~~~n~WP~~--~~~fr~~~~~y~~~~~~L~~~ll~~la~~Lg 180 (358)
T PLN02515 116 --SS-HLQGE--AVQDWREIVT-YFSYPVR-------TRDYSRWPDK--PEGWRAVTEEYSEKLMGLACKLLEVLSEAMG 180 (358)
T ss_pred --cc-ccccc--cccCceeeec-cccCccc-------cccccccccc--chHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 12 22222 45788 9887 5422211 1235899986 6899999999999999999999999999999
Q ss_pred CCCcccCCCcccCCCcceEEEEecCCCCCCCCcccccccccccCCCceeEEeeCCCCceeEEeCCCCCCCceEEccCCCC
Q 022020 165 LDVDFFGKPEILGNAMPYVSFNHYGVQDADPSKEYILGTPAHSDPSLITLLATDEVPGLQICRNIHANPRVWENVVPLKD 244 (304)
Q Consensus 165 l~~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~~HtD~~~lTll~~d~~~GLqv~~~~~~~~~~W~~v~~~~g 244 (304)
+++++|. +.+....+.+|++|||+++.. + ..+|+++|||+|+||||+||+++||||+.+++ |+|++|+|.||
T Consensus 181 l~~~~f~--~~~~~~~~~lrl~~YP~~~~~--~-~~~G~~~HTD~g~lTlL~Qd~v~GLQV~~~~~---~~Wi~Vpp~pg 252 (358)
T PLN02515 181 LEKEALT--KACVDMDQKVVVNYYPKCPQP--D-LTLGLKRHTDPGTITLLLQDQVGGLQATRDGG---KTWITVQPVEG 252 (358)
T ss_pred CChhhHH--HhhcCccceEEEeecCCCCCh--h-hccCCCCCCCCCeEEEEecCCCCceEEEECCC---CeEEECCCCCC
Confidence 9999998 777777789999999998642 2 68999999999999999999999999998763 57999999999
Q ss_pred eEEEEcchhHHHHhCCcccccccccC-C-CCceeEEEeeecCCCCceeecCCCCCCCCCCCC
Q 022020 245 AFIVNIGDMLERMSNCVFRSTMHRVL-F-RQERYTIAYFVYPSNDAMIECFPTCKSEEKPPK 304 (304)
Q Consensus 245 ~~iVn~Gd~l~~~T~G~~~s~~HRV~-~-~~~R~S~~~f~~p~~d~~i~p~~~~~~~~~p~~ 304 (304)
++|||+||+||+||||+|||++|||+ + ..+|||++||+.|+.|++|.|++ ++++++|++
T Consensus 253 alVVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Si~~F~~P~~d~~i~Pl~-~~~~~~p~~ 313 (358)
T PLN02515 253 AFVVNLGDHGHYLSNGRFKNADHQAVVNSNCSRLSIATFQNPAPDATVYPLK-VREGEKPIL 313 (358)
T ss_pred eEEEEccHHHHHHhCCeeeeecceEECCCCCCEEEEEEEecCCCCCEEECCC-cCCCCCCCc
Confidence 99999999999999999999999998 4 67999999999999999999997 667667653
No 10
>PLN02216 protein SRG1
Probab=100.00 E-value=6.4e-69 Score=493.23 Aligned_cols=267 Identities=27% Similarity=0.474 Sum_probs=231.3
Q ss_pred CCCceeeCCC----cchHHHHHHHHHHHHhcceEEEEecCCChHHHHHHHHHHHHHhcCCHHHHhhhhhc--CCCCcccC
Q 022020 13 AALNCIDLSD----PDIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFELPFDEKMKLWVE--RNRGYKQP 86 (304)
Q Consensus 13 ~~iPvIDl~~----~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~--~~~GY~~~ 86 (304)
.+||+|||+. ..+.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ..+||...
T Consensus 51 ~~iPvIDls~~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~Gy~~~ 130 (357)
T PLN02216 51 SEIPIIDMKRLCSSTAMDSEVEKLDFACKEWGFFQLVNHGIDSSFLDKVKSEIQDFFNLPMEEKKKLWQRPGEIEGFGQA 130 (357)
T ss_pred CCCCeEEChhccCCccHHHHHHHHHHHHHHCcEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHHhhhcCCCCccccCcc
Confidence 5899999963 12456899999999999999999999999999999999999999999999998654 56788653
Q ss_pred CcccccccccccCccc-chhhhcCCCCCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 022020 87 LKNQFFDQETNQQAHG-EAYSLVGPETEDDLDPEKPLCGPNVWPSADVLPGWKETMLRYQQEALNLGRKIGRIIALALDL 165 (304)
Q Consensus 87 ~~e~~~~~~~~~~~d~-E~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~la~~ll~~l~~~Lgl 165 (304)
... ... +..|+ |.|. ++..|.. ...+|.||.. ++.||+++++|+++|.+|+.+||++|+++||+
T Consensus 131 ~~~---~~~--~~~d~~e~~~-~~~~p~~-------~~~~~~WP~~--p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl 195 (357)
T PLN02216 131 FVV---SED--QKLDWADMFF-LTMQPVR-------LRKPHLFPKL--PLPFRDTLETYSAEVKSIAKILFAKMASALEI 195 (357)
T ss_pred ccc---ccc--ccCCceeeee-eeccCcc-------cccchhcccc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 321 111 45678 9987 7644321 2568999975 68999999999999999999999999999999
Q ss_pred CCcccCCCcccCC-CcceEEEEecCCCCCCCCcccccccccccCCCceeEEee-CCCCceeEEeCCCCCCCceEEccCCC
Q 022020 166 DVDFFGKPEILGN-AMPYVSFNHYGVQDADPSKEYILGTPAHSDPSLITLLAT-DEVPGLQICRNIHANPRVWENVVPLK 243 (304)
Q Consensus 166 ~~~~~~~~~~~~~-~~~~lr~~~Yp~~~~~~~~~~~~~~~~HtD~~~lTll~~-d~~~GLqv~~~~~~~~~~W~~v~~~~ 243 (304)
++++|. +.+.. ..+.||++||||++.. + ..+|+++|||+|+||||+| ++++||||+.. |+|++|+|+|
T Consensus 196 ~~~~f~--~~~~~~~~~~lRl~~YPp~p~~-~--~~~G~~~HtD~g~lTlL~q~~~v~GLQV~~~-----g~Wi~V~p~p 265 (357)
T PLN02216 196 KPEEME--KLFDDDLGQSIRMNYYPPCPQP-D--QVIGLTPHSDAVGLTILLQVNEVEGLQIKKD-----GKWVSVKPLP 265 (357)
T ss_pred CHHHHH--HHhccCchheeEEeecCCCCCc-c--cccCccCcccCceEEEEEecCCCCceeEEEC-----CEEEECCCCC
Confidence 999998 76665 4578999999998753 2 6899999999999999999 57999999853 5699999999
Q ss_pred CeEEEEcchhHHHHhCCcccccccccC-C-CCceeEEEeeecCCCCceeecCCCCCCCCCCCC
Q 022020 244 DAFIVNIGDMLERMSNCVFRSTMHRVL-F-RQERYTIAYFVYPSNDAMIECFPTCKSEEKPPK 304 (304)
Q Consensus 244 g~~iVn~Gd~l~~~T~G~~~s~~HRV~-~-~~~R~S~~~f~~p~~d~~i~p~~~~~~~~~p~~ 304 (304)
|++|||+||+||+||||+|||++|||+ + .++|||++||+.|+.|++|.|+++|+++++|++
T Consensus 266 galvVNiGD~L~~~TNG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~~i~p~~~lv~~~~p~~ 328 (357)
T PLN02216 266 NALVVNVGDILEIITNGTYRSIEHRGVVNSEKERLSVATFHNTGMGKEIGPAKSLVERQKAAL 328 (357)
T ss_pred CeEEEEcchhhHhhcCCeeeccCceeecCCCCCEEEEEEEecCCCCCeEeCcHHHcCCCCCCC
Confidence 999999999999999999999999999 4 679999999999999999999999999998864
No 11
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=7.4e-69 Score=493.48 Aligned_cols=269 Identities=32% Similarity=0.549 Sum_probs=234.1
Q ss_pred cCCCCceeeCCC------cchHHHHHHHHHHHHhcceEEEEecCCChHHHHHHHHHHHHHhcCCHHHHhhhhhc--CCCC
Q 022020 11 VSAALNCIDLSD------PDIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFELPFDEKMKLWVE--RNRG 82 (304)
Q Consensus 11 ~~~~iPvIDl~~------~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~--~~~G 82 (304)
...+||+|||+. ..+.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ..+|
T Consensus 49 ~~~~IPvIDl~~l~~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~LP~eeK~k~~~~~~~~~G 128 (361)
T PLN02758 49 APDDIPVIDFSRLVKGDNDELFSEILKLRLACEEWGFFQVINHGIELELLEEIEKVAREFFMLPLEEKQKYPMAPGTVQG 128 (361)
T ss_pred CCCCCCeEEchhhcCCChHHHHHHHHHHHHHHHhCeEEEEecCCCCHHHHHHHHHHHHHHhcCCHHHHHHhcccCCCccc
Confidence 345799999962 12355789999999999999999999999999999999999999999999998765 5789
Q ss_pred cccCCcccccccccccCccc-chhhhcCCCCCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 022020 83 YKQPLKNQFFDQETNQQAHG-EAYSLVGPETEDDLDPEKPLCGPNVWPSADVLPGWKETMLRYQQEALNLGRKIGRIIAL 161 (304)
Q Consensus 83 Y~~~~~e~~~~~~~~~~~d~-E~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~la~~ll~~l~~ 161 (304)
|...... . .. ...|| |.|. ++..+.. ...+|.||+. .+.||+.+++|+++|.+|+..||++|++
T Consensus 129 Y~~~~~~-~--~~--~~~d~~e~~~-~~~~p~~-------~~~~~~WP~~--~~~fr~~~~~y~~~~~~l~~~ll~~la~ 193 (361)
T PLN02758 129 YGQAFVF-S--ED--QKLDWCNMFA-LGVEPHF-------IRNPKLWPTK--PARFSETLEVYSREIRELCQRLLKYIAM 193 (361)
T ss_pred cCccccc-c--cc--cccCeeEEEE-eeccCcc-------ccccccCccc--cHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9654322 1 11 45678 9888 7654322 1357999986 6899999999999999999999999999
Q ss_pred hCCCCCcccCCCcccCCCcceEEEEecCCCCCCCCcccccccccccCCCceeEEeeCC--CCceeEEeCCCCCCCceEEc
Q 022020 162 ALDLDVDFFGKPEILGNAMPYVSFNHYGVQDADPSKEYILGTPAHSDPSLITLLATDE--VPGLQICRNIHANPRVWENV 239 (304)
Q Consensus 162 ~Lgl~~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~~HtD~~~lTll~~d~--~~GLqv~~~~~~~~~~W~~v 239 (304)
+||+++++|. +.+....+.||++|||+++.. + ..+|+++|||+|+||||+|+. ++||||+.+ |+|++|
T Consensus 194 ~Lgl~~~~f~--~~~~~~~~~lR~~~YP~~~~~-~--~~~g~~~HtD~g~lTlL~qd~~~v~GLQV~~~-----g~Wi~V 263 (361)
T PLN02758 194 TLGLKEDRFE--EMFGEAVQAVRMNYYPPCSRP-D--LVLGLSPHSDGSALTVLQQGKGSCVGLQILKD-----NTWVPV 263 (361)
T ss_pred HcCCChhhhH--HHhcCccceeeeecCCCCCCc-c--cccCccCccCCceeEEEEeCCCCCCCeeeeeC-----CEEEeC
Confidence 9999999999 777788899999999998753 2 689999999999999999984 889999874 569999
Q ss_pred cCCCCeEEEEcchhHHHHhCCcccccccccC-C-CCceeEEEeeecCCCCceeecCCCCCCCCCCCC
Q 022020 240 VPLKDAFIVNIGDMLERMSNCVFRSTMHRVL-F-RQERYTIAYFVYPSNDAMIECFPTCKSEEKPPK 304 (304)
Q Consensus 240 ~~~~g~~iVn~Gd~l~~~T~G~~~s~~HRV~-~-~~~R~S~~~f~~p~~d~~i~p~~~~~~~~~p~~ 304 (304)
+|.||++|||+||+||+||||+|||+.|||+ + +++|||++||++|+.|++|.|+++|+++++|++
T Consensus 264 ~p~pgalVVNiGD~L~~~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~i~pl~elv~~~~p~~ 330 (361)
T PLN02758 264 HPVPNALVINIGDTLEVLTNGKYKSVEHRAVTNKEKDRLSIVTFYAPSYEVELGPMPELVDDENPCK 330 (361)
T ss_pred CCCCCeEEEEccchhhhhcCCeeecccceeecCCCCCEEEEEEEecCCCCCeEeCCHHHcCCCCCCc
Confidence 9999999999999999999999999999999 5 679999999999999999999999999998864
No 12
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=2.7e-68 Score=486.64 Aligned_cols=267 Identities=31% Similarity=0.527 Sum_probs=229.7
Q ss_pred cCCCCceeeCCCcchHHHHHHHHHHHHhcceEEEEecCCChHHHHHHHHHHHHHhcCCHHHHhhhhhc----CCCCcccC
Q 022020 11 VSAALNCIDLSDPDIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFELPFDEKMKLWVE----RNRGYKQP 86 (304)
Q Consensus 11 ~~~~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~----~~~GY~~~ 86 (304)
...+||+|||+...+.+++++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++... ..++|...
T Consensus 34 ~~~~iPvIDls~~~~~~~~~~l~~Ac~~~GFf~v~nHGI~~~l~~~~~~~~~~fF~LP~e~K~~~~~~~~~~~~~~~~~~ 113 (337)
T PLN02639 34 TCENVPVIDLGSPDRAQVVQQIGDACRRYGFFQVINHGVSAELVEKMLAVAHEFFRLPVEEKMKLYSDDPTKTMRLSTSF 113 (337)
T ss_pred cCCCCCeEECCCccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHhcCCHHHHhhhhccCCCCcccccccc
Confidence 34689999998777888999999999999999999999999999999999999999999999997543 22333332
Q ss_pred CcccccccccccCccc-chhhhcCCCCCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 022020 87 LKNQFFDQETNQQAHG-EAYSLVGPETEDDLDPEKPLCGPNVWPSADVLPGWKETMLRYQQEALNLGRKIGRIIALALDL 165 (304)
Q Consensus 87 ~~e~~~~~~~~~~~d~-E~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~la~~ll~~l~~~Lgl 165 (304)
+.. .. ...++ |.|. +...|.. ..+|.||+. ++.|++.+++|+++|.+|+.+||++|+++||+
T Consensus 114 ~~~----~~--~~~~~~e~~~-~~~~p~~--------~~~n~wP~~--~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl 176 (337)
T PLN02639 114 NVR----KE--KVHNWRDYLR-LHCYPLD--------KYVPEWPSN--PPSFKEIVSTYCREVRELGFRLQEAISESLGL 176 (337)
T ss_pred ccc----cC--cccCchheEE-eeecCCc--------ccchhCccc--chHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 211 11 34466 7776 5432211 236899986 68999999999999999999999999999999
Q ss_pred CCcccCCCcccCCCcceEEEEecCCCCCCCCcccccccccccCCCceeEEeeC-CCCceeEEeCCCCCCCceEEccCCCC
Q 022020 166 DVDFFGKPEILGNAMPYVSFNHYGVQDADPSKEYILGTPAHSDPSLITLLATD-EVPGLQICRNIHANPRVWENVVPLKD 244 (304)
Q Consensus 166 ~~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~~HtD~~~lTll~~d-~~~GLqv~~~~~~~~~~W~~v~~~~g 244 (304)
++++|. +.+....+.||++|||+++.. + ..+|+++|||+|+||||+|| +++||||+.. |+|++|+|.||
T Consensus 177 ~~~~f~--~~~~~~~~~lrl~~YP~~~~~--~-~~~g~~~HTD~g~lTlL~qd~~v~GLQV~~~-----g~Wi~V~p~pg 246 (337)
T PLN02639 177 EKDYIK--NVLGEQGQHMAVNYYPPCPEP--E-LTYGLPAHTDPNALTILLQDQQVAGLQVLKD-----GKWVAVNPHPG 246 (337)
T ss_pred CHHHHH--HHhCCCccEEEEEcCCCCCCc--c-cccCCCCCcCCCceEEEEecCCcCceEeecC-----CeEEeccCCCC
Confidence 999998 777778889999999998753 2 67999999999999999998 4999999853 56999999999
Q ss_pred eEEEEcchhHHHHhCCcccccccccC--CCCceeEEEeeecCCCCceeecCCCCCCCCCCCC
Q 022020 245 AFIVNIGDMLERMSNCVFRSTMHRVL--FRQERYTIAYFVYPSNDAMIECFPTCKSEEKPPK 304 (304)
Q Consensus 245 ~~iVn~Gd~l~~~T~G~~~s~~HRV~--~~~~R~S~~~f~~p~~d~~i~p~~~~~~~~~p~~ 304 (304)
++|||+||+|++||||+|||++|||+ +.++|||++||++|+.|++|.|+++|+++++|++
T Consensus 247 ~lVVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~~~~~~~p~~ 308 (337)
T PLN02639 247 AFVINIGDQLQALSNGRYKSVWHRAVVNTDKERMSVASFLCPCDDAVISPAKKLTDDGTAAV 308 (337)
T ss_pred eEEEechhHHHHHhCCeeeccCcccccCCCCCEEEEEEEecCCCCceEeCchHHcCCCCCCC
Confidence 99999999999999999999999999 4679999999999999999999999999988864
No 13
>PLN02156 gibberellin 2-beta-dioxygenase
Probab=100.00 E-value=7.3e-68 Score=481.11 Aligned_cols=268 Identities=25% Similarity=0.423 Sum_probs=226.5
Q ss_pred CCCceeeCCCcchHHHHHHHHHHHHhcceEEEEecCCChHHHHHHHHHHHHHhcCCHHHHhhhhhcCCCCcccCCccccc
Q 022020 13 AALNCIDLSDPDIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFELPFDEKMKLWVERNRGYKQPLKNQFF 92 (304)
Q Consensus 13 ~~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~GY~~~~~e~~~ 92 (304)
..||+|||+.. +..++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++.....+||......
T Consensus 25 ~~iPvIDls~~---~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~LP~e~K~~~~~~~~~Gy~~~~~~--- 98 (335)
T PLN02156 25 VLIPVIDLTDS---DAKTQIVKACEEFGFFKVINHGVRPDLLTQLEQEAIGFFALPHSLKDKAGPPDPFGYGTKRIG--- 98 (335)
T ss_pred CCCCcccCCCh---HHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhcCCCCCcccCccccC---
Confidence 46999999853 246799999999999999999999999999999999999999999999865545588542211
Q ss_pred ccccccCccc-chhhhcCCCCCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC-ccc
Q 022020 93 DQETNQQAHG-EAYSLVGPETEDDLDPEKPLCGPNVWPSADVLPGWKETMLRYQQEALNLGRKIGRIIALALDLDV-DFF 170 (304)
Q Consensus 93 ~~~~~~~~d~-E~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~la~~ll~~l~~~Lgl~~-~~~ 170 (304)
.. ...++ |.|. +..++... ....+|.||.. ++.|++++++|+++|.+|+.+|+++|+++||+++ ++|
T Consensus 99 -~~--~~~~~~e~~~-~~~~~~~~-----~~~~~~~wp~~--p~~fr~~~~~Y~~~~~~L~~~ll~~la~~LGl~~~~~f 167 (335)
T PLN02156 99 -PN--GDVGWLEYIL-LNANLCLE-----SHKTTAVFRHT--PAIFREAVEEYMKEMKRMSSKVLEMVEEELKIEPKEKL 167 (335)
T ss_pred -CC--CCCCceeeEe-eecCCccc-----cccchhcCccc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcCcHHHH
Confidence 11 33466 8887 66442111 01247899986 5789999999999999999999999999999974 678
Q ss_pred CCCcccC--CCcceEEEEecCCCCCCCCcccccccccccCCCceeEEeeCCCCceeEEeCCCCCCCceEEccCCCCeEEE
Q 022020 171 GKPEILG--NAMPYVSFNHYGVQDADPSKEYILGTPAHSDPSLITLLATDEVPGLQICRNIHANPRVWENVVPLKDAFIV 248 (304)
Q Consensus 171 ~~~~~~~--~~~~~lr~~~Yp~~~~~~~~~~~~~~~~HtD~~~lTll~~d~~~GLqv~~~~~~~~~~W~~v~~~~g~~iV 248 (304)
. +.+. ...+.||+||||+++..+.. ..+|+++|||+|+||||+||+++||||+..+ |+|++|+|.||++||
T Consensus 168 ~--~~~~~~~~~~~lRl~~YP~~~~~~~~-~~~g~~~HTD~g~lTlL~Qd~v~GLQV~~~~----g~Wi~Vpp~pga~VV 240 (335)
T PLN02156 168 S--KLVKVKESDSCLRMNHYPEKEETPEK-VEIGFGEHTDPQLISLLRSNDTAGLQICVKD----GTWVDVPPDHSSFFV 240 (335)
T ss_pred H--HHhcCCCccceEeEEeCCCCCCCccc-cccCCCCccCCCceEEEEeCCCCceEEEeCC----CCEEEccCCCCcEEE
Confidence 7 5543 45689999999999854333 5799999999999999999999999998654 679999999999999
Q ss_pred EcchhHHHHhCCcccccccccC-C-CCceeEEEeeecCCCCceeecCCCCCCCCCCCC
Q 022020 249 NIGDMLERMSNCVFRSTMHRVL-F-RQERYTIAYFVYPSNDAMIECFPTCKSEEKPPK 304 (304)
Q Consensus 249 n~Gd~l~~~T~G~~~s~~HRV~-~-~~~R~S~~~f~~p~~d~~i~p~~~~~~~~~p~~ 304 (304)
|+||+||+||||+|+|+.|||+ + +++|||++||+.|+.|++|.|+++|+++++|++
T Consensus 241 NiGD~l~~wTNg~~kSt~HRVv~~~~~~R~SiafF~~P~~d~~i~pl~~~v~~~~p~~ 298 (335)
T PLN02156 241 LVGDTLQVMTNGRFKSVKHRVVTNTKRSRISMIYFAGPPLSEKIAPLSCLVPKQDDCL 298 (335)
T ss_pred EhHHHHHHHhCCeeeccceeeecCCCCCEEEEEEeecCCCCCEEeCChHhcCCCCCcc
Confidence 9999999999999999999999 5 568999999999999999999999999998864
No 14
>PLN02704 flavonol synthase
Probab=100.00 E-value=4.2e-68 Score=485.00 Aligned_cols=269 Identities=29% Similarity=0.454 Sum_probs=229.8
Q ss_pred cCCCCceeeCCCcchHHHHHHHHHHHHhcceEEEEecCCChHHHHHHHHHHHHHhcCCHHHHhhhhhc----CCCCcccC
Q 022020 11 VSAALNCIDLSDPDIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFELPFDEKMKLWVE----RNRGYKQP 86 (304)
Q Consensus 11 ~~~~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~----~~~GY~~~ 86 (304)
...+||+|||+..++.+++++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++... .++||...
T Consensus 39 ~~~~iPvIDls~~~~~~~~~~l~~Ac~~~GFf~l~nHGI~~~l~~~~~~~~~~FF~LP~e~K~~~~~~~~~~~~~Gy~~~ 118 (335)
T PLN02704 39 VDPQVPTIDLSDPDEEKLTRLIAEASKEWGMFQIVNHGIPSEVISKLQKVGKEFFELPQEEKEVYAKPPDSKSIEGYGTK 118 (335)
T ss_pred cCCCCCeEECCCccHHHHHHHHHHHHHHcCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHHhhccCCCccccccccc
Confidence 34579999998766777899999999999999999999999999999999999999999999998754 35898764
Q ss_pred CcccccccccccCccc-chhhhcCCCCCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 022020 87 LKNQFFDQETNQQAHG-EAYSLVGPETEDDLDPEKPLCGPNVWPSADVLPGWKETMLRYQQEALNLGRKIGRIIALALDL 165 (304)
Q Consensus 87 ~~e~~~~~~~~~~~d~-E~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~la~~ll~~l~~~Lgl 165 (304)
..+ .. . +..++ |.+. ....+.. ....|.||.. +|+||+.+++|+++|.+|+.+||++|+++||+
T Consensus 119 ~~~-~~--~--~~~~~~d~~~-~~~~p~~-------~~~~n~wP~~--~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl 183 (335)
T PLN02704 119 LQK-EP--E--GKKAWVDHLF-HRIWPPS-------AINYQFWPKN--PPSYREVNEEYAKYLRGVADKLFKTLSLGLGL 183 (335)
T ss_pred ccc-cc--c--CcccceeeeE-eeecCCc-------ccchhhCccc--cchhHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 433 11 1 44455 6554 3211111 1245899986 68999999999999999999999999999999
Q ss_pred CCcccCCCcccCC--CcceEEEEecCCCCCCCCcccccccccccCCCceeEEeeCCCCceeEEeCCCCCCCceEEccCCC
Q 022020 166 DVDFFGKPEILGN--AMPYVSFNHYGVQDADPSKEYILGTPAHSDPSLITLLATDEVPGLQICRNIHANPRVWENVVPLK 243 (304)
Q Consensus 166 ~~~~~~~~~~~~~--~~~~lr~~~Yp~~~~~~~~~~~~~~~~HtD~~~lTll~~d~~~GLqv~~~~~~~~~~W~~v~~~~ 243 (304)
++++|. +.+.. ..+.||++||||++.. + ..+|+++|||+|+||||+||.++||||+.. |+|++|+|.|
T Consensus 184 ~~~~f~--~~~~~~~~~~~lrl~~YP~~~~~--~-~~~g~~~HtD~g~lTlL~qd~v~GLQV~~~-----g~Wi~V~p~p 253 (335)
T PLN02704 184 EEDELK--EAVGGEELEYLLKINYYPPCPRP--D-LALGVVAHTDMSAITILVPNEVQGLQVFRD-----DHWFDVKYIP 253 (335)
T ss_pred CHHHHH--HHhcCCchhhhhhhhcCCCCCCc--c-cccCccCccCCcceEEEecCCCCceeEeEC-----CEEEeCCCCC
Confidence 999998 65543 3468999999998643 2 689999999999999999999999999853 5699999999
Q ss_pred CeEEEEcchhHHHHhCCcccccccccC-C-CCceeEEEeeecCCCCceeecCCCCCCCCCCCC
Q 022020 244 DAFIVNIGDMLERMSNCVFRSTMHRVL-F-RQERYTIAYFVYPSNDAMIECFPTCKSEEKPPK 304 (304)
Q Consensus 244 g~~iVn~Gd~l~~~T~G~~~s~~HRV~-~-~~~R~S~~~f~~p~~d~~i~p~~~~~~~~~p~~ 304 (304)
|++|||+||+||+||||+|||++|||+ + .++|||++||+.|+.|+.|.|+++|+++++|++
T Consensus 254 g~lvVNvGD~L~~~TNg~~kSt~HRVv~~~~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~p~~ 316 (335)
T PLN02704 254 NALVIHIGDQIEILSNGKYKSVLHRTTVNKEKTRMSWPVFLEPPSELAVGPLPKLINEDNPPK 316 (335)
T ss_pred CeEEEEechHHHHHhCCeeecccceeecCCCCCeEEEEEEecCCCCceEeCChHhcCCCCCcc
Confidence 999999999999999999999999999 5 679999999999999999999999999999864
No 15
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1e-67 Score=483.64 Aligned_cols=267 Identities=30% Similarity=0.483 Sum_probs=227.7
Q ss_pred CCCceeeCCC-----cchHHHHHHHHHHHHhcceEEEEecCCChHHHHHHHHHHHHHhcCCHHHHhhhhhc--CCCCccc
Q 022020 13 AALNCIDLSD-----PDIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFELPFDEKMKLWVE--RNRGYKQ 85 (304)
Q Consensus 13 ~~iPvIDl~~-----~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~--~~~GY~~ 85 (304)
++||+|||+. ..+...+++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++... .++||..
T Consensus 43 ~~IPvIDls~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nHGI~~~l~~~~~~~~~~FF~LP~eeK~~~~~~~~~~~GY~~ 122 (348)
T PLN00417 43 MDIPAIDLSLLLSSSDDGREELSKLHSALSTWGVVQVMNHGITEAFLDKIYKLTKQFFALPTEEKQKCAREIGSIQGYGN 122 (348)
T ss_pred CCCCeEEChhhcCCCchHHHHHHHHHHHHHHCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHHhhcCCCCcccccc
Confidence 4899999962 22344678999999999999999999999999999999999999999999999765 5689965
Q ss_pred CCcccccccccccCccc-chhhhcCCCCCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 022020 86 PLKNQFFDQETNQQAHG-EAYSLVGPETEDDLDPEKPLCGPNVWPSADVLPGWKETMLRYQQEALNLGRKIGRIIALALD 164 (304)
Q Consensus 86 ~~~e~~~~~~~~~~~d~-E~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~la~~ll~~l~~~Lg 164 (304)
.. ..... ...|+ |.|. ++..|.+. ..+|.||+. +++||+++++|+++|.+|+.+||++|+++||
T Consensus 123 ~~---~~~~~--~~~d~~e~~~-~~~~p~~~-------~~~n~wP~~--~~~fr~~~~~y~~~~~~l~~~ll~~la~~LG 187 (348)
T PLN00417 123 DM---ILSDD--QVLDWIDRLY-LTTYPEDQ-------RQLKFWPQV--PVGFRETLHEYTMKQRLVIEKFFKAMARSLE 187 (348)
T ss_pred cc---ccccC--CCcCccceee-cccCCccc-------ccccccccc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 22 11111 44566 8776 55333221 346999986 6899999999999999999999999999999
Q ss_pred CCCcccCCCcccCC-CcceEEEEecCCCCCCCCcccccccccccCCCceeEEeeC-CCCceeEEeCCCCCCCceEEccCC
Q 022020 165 LDVDFFGKPEILGN-AMPYVSFNHYGVQDADPSKEYILGTPAHSDPSLITLLATD-EVPGLQICRNIHANPRVWENVVPL 242 (304)
Q Consensus 165 l~~~~~~~~~~~~~-~~~~lr~~~Yp~~~~~~~~~~~~~~~~HtD~~~lTll~~d-~~~GLqv~~~~~~~~~~W~~v~~~ 242 (304)
+++++|. +.+.. ..+.||++||||++.. . ..+|+++|||+|+||||+|| .++||||+.. |+|++|+|.
T Consensus 188 l~~~~f~--~~~~~~~~~~lRl~~YPp~~~~--~-~~~g~~~HTD~g~lTlL~qd~~v~GLQV~~~-----g~Wi~V~p~ 257 (348)
T PLN00417 188 LEENCFL--EMYGENATMDTRFNMYPPCPRP--D-KVIGVKPHADGSAFTLLLPDKDVEGLQFLKD-----GKWYKAPIV 257 (348)
T ss_pred CCHHHHH--HHhccCccceeeeeecCCCCCc--c-cccCCcCccCCCceEEEEecCCCCceeEeEC-----CeEEECCCC
Confidence 9999988 66554 3467999999998753 2 67999999999999999997 6999999853 569999999
Q ss_pred CCeEEEEcchhHHHHhCCcccccccccC-C-CCceeEEEeeecCCCCceeecCCCCCCCCCCCC
Q 022020 243 KDAFIVNIGDMLERMSNCVFRSTMHRVL-F-RQERYTIAYFVYPSNDAMIECFPTCKSEEKPPK 304 (304)
Q Consensus 243 ~g~~iVn~Gd~l~~~T~G~~~s~~HRV~-~-~~~R~S~~~f~~p~~d~~i~p~~~~~~~~~p~~ 304 (304)
||++|||+||+||+||||+|+|++|||+ + ..+|||++||+.|+.|++|+|+++|+++++|++
T Consensus 258 pg~lVVNiGD~Le~~Tng~~kSt~HRVv~~~~~~R~Si~fF~~P~~d~~i~pl~~~v~~~~p~~ 321 (348)
T PLN00417 258 PDTILINVGDQMEIMSNGIYKSPVHRVVTNREKERISVATFCIPGADKEIQPVDGLVSEARPRL 321 (348)
T ss_pred CCcEEEEcChHHHHHhCCeecccceEEecCCCCCEEEEEEEecCCCCceecCchHhcCCCCCCC
Confidence 9999999999999999999999999999 5 579999999999999999999999999988875
No 16
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.3e-67 Score=482.98 Aligned_cols=263 Identities=28% Similarity=0.433 Sum_probs=225.2
Q ss_pred CCCCceeeCCC---cchHHHHHHHHHHHHhcceEEEEecCCChHHHHHHHHHHHHHhcCCHHHHhhhhhc----CCCCcc
Q 022020 12 SAALNCIDLSD---PDIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFELPFDEKMKLWVE----RNRGYK 84 (304)
Q Consensus 12 ~~~iPvIDl~~---~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~----~~~GY~ 84 (304)
..+||+|||+. .++.+++++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++... ..+||.
T Consensus 39 ~~~iPvIDls~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGI~~~l~~~~~~~~~~FF~LP~eeK~k~~~~~~~~~~~~~~ 118 (348)
T PLN02912 39 GDSIPLIDLRDLHGPNRADIINQFAHACSSYGFFQIKNHGVPEETIKKMMNVAREFFHQSESERVKHYSADTKKTTRLST 118 (348)
T ss_pred CCCCCeEECcccCCcCHHHHHHHHHHHHHHCCEEEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHhHhhcCCCCcccccc
Confidence 35799999963 34677899999999999999999999999999999999999999999999995432 233443
Q ss_pred cCCcccccccccccCccc-chhhhcCCCCCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 022020 85 QPLKNQFFDQETNQQAHG-EAYSLVGPETEDDLDPEKPLCGPNVWPSADVLPGWKETMLRYQQEALNLGRKIGRIIALAL 163 (304)
Q Consensus 85 ~~~~e~~~~~~~~~~~d~-E~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~la~~ll~~l~~~L 163 (304)
..... .. ...++ |.+. +...+.. ..+|.||.. +++||+++++|+++|.+|+.+||++|+++|
T Consensus 119 ~~~~~----~~--~~~~~~e~~~-~~~~~~~--------~~~n~wP~~--~~~fr~~~~~y~~~~~~l~~~il~~la~~L 181 (348)
T PLN02912 119 SFNVS----KE--KVSNWRDFLR-LHCYPIE--------DFIEEWPST--PISFREVTAEYATSVRALVLTLLEAISESL 181 (348)
T ss_pred ccccc----cc--ccCCchheEE-EeecCcc--------cccccCcch--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 33211 11 34566 7776 6422211 246899986 689999999999999999999999999999
Q ss_pred CCCCcccCCCcccCCCcceEEEEecCCCCCCCCcccccccccccCCCceeEEeeCCCCceeEEeCCCCCCCceEEccCCC
Q 022020 164 DLDVDFFGKPEILGNAMPYVSFNHYGVQDADPSKEYILGTPAHSDPSLITLLATDEVPGLQICRNIHANPRVWENVVPLK 243 (304)
Q Consensus 164 gl~~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~~HtD~~~lTll~~d~~~GLqv~~~~~~~~~~W~~v~~~~ 243 (304)
|+++++|. +.+....+.||++||||++... ..+|+++|||+|+||||+||+++||||+.. |+|++|+|.|
T Consensus 182 gl~~~~f~--~~~~~~~~~lrl~~YPp~~~~~---~~~G~~~HtD~g~lTlL~Qd~v~GLQV~~~-----g~Wi~V~p~p 251 (348)
T PLN02912 182 GLEKDRVS--NTLGKHGQHMAINYYPPCPQPE---LTYGLPGHKDANLITVLLQDEVSGLQVFKD-----GKWIAVNPIP 251 (348)
T ss_pred CCCHHHHH--HHhcCccceeeeeecCCCCChh---hcCCcCCCcCCCceEEEEECCCCceEEEEC-----CcEEECCCcC
Confidence 99999998 7777778899999999987532 679999999999999999999999999953 5699999999
Q ss_pred CeEEEEcchhHHHHhCCcccccccccC-C-CCceeEEEeeecCCCCceeecCCCCCCCCC
Q 022020 244 DAFIVNIGDMLERMSNCVFRSTMHRVL-F-RQERYTIAYFVYPSNDAMIECFPTCKSEEK 301 (304)
Q Consensus 244 g~~iVn~Gd~l~~~T~G~~~s~~HRV~-~-~~~R~S~~~f~~p~~d~~i~p~~~~~~~~~ 301 (304)
|++|||+||+|++||||+|||++|||+ + .++|||++||++|+.|+.|.|+++|+++++
T Consensus 252 galvVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~~v~~~~ 311 (348)
T PLN02912 252 NTFIVNLGDQMQVISNDKYKSVLHRAVVNTDKERISIPTFYCPSEDAVIGPAQELINEEE 311 (348)
T ss_pred CeEEEEcCHHHHHHhCCEEEcccccccCCCCCCEEEEEEEecCCCCCeEeCCHHHhCcCC
Confidence 999999999999999999999999998 4 679999999999999999999999998764
No 17
>PLN02904 oxidoreductase
Probab=100.00 E-value=1.7e-67 Score=483.36 Aligned_cols=269 Identities=28% Similarity=0.381 Sum_probs=224.8
Q ss_pred CCCceeeCCC----cchHHHHHHHHHHHHhcceEEEEecCCChHHHHHHHHHHHHHhcCCHHHHhhhhhcCCCCcccCCc
Q 022020 13 AALNCIDLSD----PDIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFELPFDEKMKLWVERNRGYKQPLK 88 (304)
Q Consensus 13 ~~iPvIDl~~----~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~GY~~~~~ 88 (304)
.+||+|||+. ..+..++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++......||.+.+.
T Consensus 50 ~~iPvIDls~~~~~~~r~~~~~~l~~Ac~~~GFf~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~~~~g~ 129 (357)
T PLN02904 50 ITLPVIDLSLLHDPLLRSCVIHEIEMACKGFGFFQVINHGIPSSVVKDALDAATRFFDLPVDEKMLLVSDNVHEPVRYGT 129 (357)
T ss_pred CCCCEEECcccCCchhHHHHHHHHHHHHHHCceEEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHhhhcccCCCCcccccc
Confidence 5799999963 345678999999999999999999999999999999999999999999999986542223222222
Q ss_pred ccccccccccCccc-chhhhcCCCCCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Q 022020 89 NQFFDQETNQQAHG-EAYSLVGPETEDDLDPEKPLCGPNVWPSADVLPGWKETMLRYQQEALNLGRKIGRIIALALDLDV 167 (304)
Q Consensus 89 e~~~~~~~~~~~d~-E~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~la~~ll~~l~~~Lgl~~ 167 (304)
+ .. .......+| |.+. ....|. ...+|.||+. +|.||+++++|+++|.+|+..||++|+++||+++
T Consensus 130 ~-~~-~~~~~~~~~~d~~~-~~~~p~--------~~~~n~WP~~--~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~ 196 (357)
T PLN02904 130 S-LN-HSTDRVHYWRDFIK-HYSHPL--------SKWINLWPSN--PPCYKEKVGKYAEATHVLHKQLIEAISESLGLEK 196 (357)
T ss_pred c-cc-ccCCCCCCceEEee-eccCCc--------ccccccCccc--chHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 2 11 000022344 5443 221111 0236999976 7899999999999999999999999999999999
Q ss_pred cccCCCcccCCCcceEEEEecCCCCCCCCcccccccccccCCCceeEEeeCCCCceeEEeCCCCCCCceEEccCCCCeEE
Q 022020 168 DFFGKPEILGNAMPYVSFNHYGVQDADPSKEYILGTPAHSDPSLITLLATDEVPGLQICRNIHANPRVWENVVPLKDAFI 247 (304)
Q Consensus 168 ~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~~HtD~~~lTll~~d~~~GLqv~~~~~~~~~~W~~v~~~~g~~i 247 (304)
++|. +.+....+.||++||||++.. + ..+|+++|||+|+||||+|+ .+||||+.++ |+|++|+|.||++|
T Consensus 197 ~~f~--~~~~~~~~~lrl~~YPp~p~~--~-~~~g~~~HtD~g~lTlL~qd-~~GLQV~~~~----g~Wi~V~p~pgalV 266 (357)
T PLN02904 197 NYLQ--EEIEEGSQVMAVNCYPACPEP--E-IALGMPPHSDFGSLTILLQS-SQGLQIMDCN----KNWVCVPYIEGALI 266 (357)
T ss_pred HHHH--HHhcCcccEEEeeecCCCCCc--c-cccCCcCccCCCceEEEecC-CCeeeEEeCC----CCEEECCCCCCeEE
Confidence 9998 777777789999999999753 2 68999999999999999997 5899999875 67999999999999
Q ss_pred EEcchhHHHHhCCcccccccccC-C-CCceeEEEeeecCCCCceeecCCCCCCCCCCCC
Q 022020 248 VNIGDMLERMSNCVFRSTMHRVL-F-RQERYTIAYFVYPSNDAMIECFPTCKSEEKPPK 304 (304)
Q Consensus 248 Vn~Gd~l~~~T~G~~~s~~HRV~-~-~~~R~S~~~f~~p~~d~~i~p~~~~~~~~~p~~ 304 (304)
||+||+||+||||+|||++|||+ + .++|||++||+.|+.|+.|.|+++++++++|++
T Consensus 267 VNiGD~Le~~TNG~~kSt~HRVv~~~~~~R~Si~~F~~p~~d~~i~Pl~~~v~~~~p~~ 325 (357)
T PLN02904 267 VQLGDQVEVMSNGIYKSVVHRVTVNKDYKRLSFASLHSLPLHKKISPAPELVNENKPAA 325 (357)
T ss_pred EEccHHHHHHhCCeeeccCCcccCCCCCCEEEEEEeecCCCCCeEeCCHHHcCCCCCCc
Confidence 99999999999999999999999 5 679999999999999999999999999998864
No 18
>PLN03178 leucoanthocyanidin dioxygenase; Provisional
Probab=100.00 E-value=1e-67 Score=486.47 Aligned_cols=268 Identities=28% Similarity=0.455 Sum_probs=228.8
Q ss_pred CCCCceeeCCC------cchHHHHHHHHHHHHhcceEEEEecCCChHHHHHHHHHHHHHhcCCHHHHhhhhhc----CCC
Q 022020 12 SAALNCIDLSD------PDIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFELPFDEKMKLWVE----RNR 81 (304)
Q Consensus 12 ~~~iPvIDl~~------~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~----~~~ 81 (304)
...||+|||+. ..+..++++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++... .++
T Consensus 45 ~~~iPvIDls~~~~~~~~~~~~~~~~l~~Ac~~~GFF~l~nHGI~~~l~~~~~~~~~~FF~LP~e~K~~~~~~~~~~~~~ 124 (360)
T PLN03178 45 GPQVPVVDLSNIESDDEVVREACVEAVRAAAAEWGVMHLVGHGIPADLLDRVRKAGEAFFRLPIEEKEKYANDQARGAAQ 124 (360)
T ss_pred CCCCCEEEchhhcCCChhhHHHHHHHHHHHHHHCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHHhhccCCCCCcc
Confidence 45799999962 13678999999999999999999999999999999999999999999999998764 367
Q ss_pred CcccCCcccccccccccCccc-chhhhcCCCCCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHH
Q 022020 82 GYKQPLKNQFFDQETNQQAHG-EAYSLVGPETEDDLDPEKPLCGPNVWPSADVLPGWKETMLRYQQEALNLGRKIGRIIA 160 (304)
Q Consensus 82 GY~~~~~e~~~~~~~~~~~d~-E~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~la~~ll~~l~ 160 (304)
||.....+ . .. +..|+ |.|. ....|.+ ...+|.||+. +|+||+.+++|+++|.+++.+||++|+
T Consensus 125 Gy~~~~~~-~--~~--~~~d~~e~~~-~~~~p~~-------~~~~n~wP~~--~p~fr~~~~~y~~~~~~l~~~ll~~la 189 (360)
T PLN03178 125 GYGSKLAA-N--AS--GQLEWEDYFF-HLTLPED-------KRDPSLWPKT--PPDYVPATSEYSRSLRSLATKLLAILS 189 (360)
T ss_pred cccccccc-c--cc--cccchhHhhc-cccCCcc-------ccccccCCCC--chHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88653332 1 11 45567 7665 4222222 1357999986 789999999999999999999999999
Q ss_pred HhCCCCCcccCCCcccC---CCcceEEEEecCCCCCCCCcccccccccccCCCceeEEeeCCCCceeEEeCCCCCCCceE
Q 022020 161 LALDLDVDFFGKPEILG---NAMPYVSFNHYGVQDADPSKEYILGTPAHSDPSLITLLATDEVPGLQICRNIHANPRVWE 237 (304)
Q Consensus 161 ~~Lgl~~~~~~~~~~~~---~~~~~lr~~~Yp~~~~~~~~~~~~~~~~HtD~~~lTll~~d~~~GLqv~~~~~~~~~~W~ 237 (304)
++||+++++|. +.+. ...+.||++|||+++.. + ..+|+++|||+|+||||+||.++||||+.+ |+|+
T Consensus 190 ~~Lgl~~~~f~--~~~~~~~~~~~~lrl~~YP~~~~~-~--~~~g~~~HTD~g~lTlL~qd~v~GLQV~~~-----g~Wi 259 (360)
T PLN03178 190 LGLGLPEDRLE--KEVGGLEELLLQMKINYYPRCPQP-D--LALGVEAHTDVSALTFILHNMVPGLQVLYE-----GKWV 259 (360)
T ss_pred HHcCCCHHHHH--HHhcCcccchhhhheeccCCCCCC-c--cccCcCCccCCCceEEEeeCCCCceeEeEC-----CEEE
Confidence 99999999998 6665 34678999999998753 2 679999999999999999999999999964 5699
Q ss_pred EccCCCCeEEEEcchhHHHHhCCcccccccccC--CCCceeEEEeeecCCCCce-eecCCCCCCCCCCCC
Q 022020 238 NVVPLKDAFIVNIGDMLERMSNCVFRSTMHRVL--FRQERYTIAYFVYPSNDAM-IECFPTCKSEEKPPK 304 (304)
Q Consensus 238 ~v~~~~g~~iVn~Gd~l~~~T~G~~~s~~HRV~--~~~~R~S~~~f~~p~~d~~-i~p~~~~~~~~~p~~ 304 (304)
+|+|.||++|||+||+||+||||+|||++|||+ +..+|||++||+.|+.|+. +.|+++|+++++|++
T Consensus 260 ~V~p~pg~lvVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Si~~F~~P~~d~~v~~pl~~~v~~~~p~~ 329 (360)
T PLN03178 260 TAKCVPDSIVVHIGDTLEILSNGRYKSILHRGLVNKEKVRISWAVFCEPPKEKIILKPLPELVSKEEPPK 329 (360)
T ss_pred EcCCCCCeEEEEccHHHHHHhCCccccccceeecCCCCCeEEEEEEecCCcccccccCcHHHcCCCCccc
Confidence 999999999999999999999999999999998 4678999999999999965 699999999888764
No 19
>PLN02393 leucoanthocyanidin dioxygenase like protein
Probab=100.00 E-value=1.8e-67 Score=484.85 Aligned_cols=268 Identities=31% Similarity=0.517 Sum_probs=230.8
Q ss_pred cCCCCceeeCCC------cchHHHHHHHHHHHHhcceEEEEecCCChHHHHHHHHHHHHHhcCCHHHHhhhhhc--CCCC
Q 022020 11 VSAALNCIDLSD------PDIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFELPFDEKMKLWVE--RNRG 82 (304)
Q Consensus 11 ~~~~iPvIDl~~------~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~--~~~G 82 (304)
..++||+|||+. ..+.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... .++|
T Consensus 48 ~~~~iPvIDls~l~~~~~~~r~~~~~~l~~Ac~~~GFF~l~nHGI~~~li~~~~~~~~~FF~LP~eeK~~~~~~~~~~~G 127 (362)
T PLN02393 48 AEINIPVIDLSSLFSDDARLRDATLRAISEACREWGFFQVVNHGVRPELMDRAREAWREFFHLPLEVKQRYANSPATYEG 127 (362)
T ss_pred cCCCCCeEECccccCCChHHHHHHHHHHHHHHHHCcEEEEEeCCCCHHHHHHHHHHHHHHHcCCHHHHHhhhcccCcccc
Confidence 346899999963 13578999999999999999999999999999999999999999999999998765 5789
Q ss_pred cc-cCCcccccccccccCccc-chhhhcCCCCCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHH
Q 022020 83 YK-QPLKNQFFDQETNQQAHG-EAYSLVGPETEDDLDPEKPLCGPNVWPSADVLPGWKETMLRYQQEALNLGRKIGRIIA 160 (304)
Q Consensus 83 Y~-~~~~e~~~~~~~~~~~d~-E~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~la~~ll~~l~ 160 (304)
|. ..+.+ . . ...|+ |.|. ++..+.. ...+|.||+. +++|++++++|+++|.+++.+||++|+
T Consensus 128 y~~~~~~~-~---~--~~~d~~e~~~-~~~~~~~-------~~~~n~wP~~--~~~fr~~~~~y~~~~~~la~~ll~~la 191 (362)
T PLN02393 128 YGSRLGVE-K---G--AILDWSDYYF-LHYLPSS-------LKDPNKWPSL--PPSCRELIEEYGEEVVKLCGRLMKVLS 191 (362)
T ss_pred cccccccc-c---c--cccCchhhee-eeecCcc-------ccchhhCccc--chHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 94 33333 1 1 44567 8887 6532211 2457999986 689999999999999999999999999
Q ss_pred HhCCCCCcccCCCcccCC---CcceEEEEecCCCCCCCCcccccccccccCCCceeEEeeC-CCCceeEEeCCCCCCCce
Q 022020 161 LALDLDVDFFGKPEILGN---AMPYVSFNHYGVQDADPSKEYILGTPAHSDPSLITLLATD-EVPGLQICRNIHANPRVW 236 (304)
Q Consensus 161 ~~Lgl~~~~~~~~~~~~~---~~~~lr~~~Yp~~~~~~~~~~~~~~~~HtD~~~lTll~~d-~~~GLqv~~~~~~~~~~W 236 (304)
++||+++++|. +.+.. +.+.||++|||+++.. + ..+|+++|||+|+||||+|+ +++||||+.. |+|
T Consensus 192 ~~Lgl~~~~f~--~~~~~~~~~~~~lRl~~YP~~p~~--~-~~~g~~~HtD~g~lTlL~q~~~v~GLQV~~~-----g~W 261 (362)
T PLN02393 192 VNLGLEEDRLQ--NAFGGEDGVGACLRVNYYPKCPQP--D-LTLGLSPHSDPGGMTILLPDDNVAGLQVRRD-----DAW 261 (362)
T ss_pred HHcCCCHHHHH--HHhCCCccccceeeeeecCCCCCc--c-cccccccccCCceEEEEeeCCCCCcceeeEC-----CEE
Confidence 99999999998 65544 3479999999998753 2 67999999999999999984 7899999943 569
Q ss_pred EEccCCCCeEEEEcchhHHHHhCCcccccccccC-C-CCceeEEEeeecCCCCceeecCCCCCCCCCCCC
Q 022020 237 ENVVPLKDAFIVNIGDMLERMSNCVFRSTMHRVL-F-RQERYTIAYFVYPSNDAMIECFPTCKSEEKPPK 304 (304)
Q Consensus 237 ~~v~~~~g~~iVn~Gd~l~~~T~G~~~s~~HRV~-~-~~~R~S~~~f~~p~~d~~i~p~~~~~~~~~p~~ 304 (304)
++|++.||++|||+||+|++||||+|||++|||+ + +++|||++||+.|+.|++|.|+++|+++++|++
T Consensus 262 ~~V~p~pgalVVNiGD~l~~~Tng~~kSt~HRVv~~~~~~R~SiafF~~P~~d~~i~pl~~~v~~~~p~~ 331 (362)
T PLN02393 262 ITVKPVPDAFIVNIGDQIQVLSNAIYKSVEHRVIVNSAKERVSLAFFYNPKSDLPIEPLKELVTPDRPAL 331 (362)
T ss_pred EECCCCCCeEEEEcchhhHhhcCCeeeccceecccCCCCCEEEEEEEecCCCCceEeCcHHhcCCCCCCC
Confidence 9999999999999999999999999999999999 5 679999999999999999999999999988864
No 20
>PLN02947 oxidoreductase
Probab=100.00 E-value=1.7e-67 Score=485.30 Aligned_cols=268 Identities=27% Similarity=0.408 Sum_probs=227.1
Q ss_pred cCCCCceeeCCC---cchHHHHHHHHHHHHhcceEEEEecCCChHHHHHHHHHHHHHhcCCHHHHhhhhhc---CCCCcc
Q 022020 11 VSAALNCIDLSD---PDIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFELPFDEKMKLWVE---RNRGYK 84 (304)
Q Consensus 11 ~~~~iPvIDl~~---~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~---~~~GY~ 84 (304)
...+||+|||+. ..+..++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ...||.
T Consensus 63 ~~~~iPvIDls~l~~~~~~~~~~~l~~Ac~~~GFF~v~nHGIp~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~~gyg 142 (374)
T PLN02947 63 GNLKLPVIDLAELRGSNRPHVLATLAAACREYGFFQVVNHGVPSEVIGGMIDVARRFFELPLEERAKYMSADMRAPVRYG 142 (374)
T ss_pred CCCCCCeEECcccCCccHHHHHHHHHHHHHHCcEEEEEcCCCCHHHHHHHHHHHHHHhcCCHHHHhhhhcccCCCCeeec
Confidence 345899999974 34677999999999999999999999999999999999999999999999998543 345664
Q ss_pred cCCcccccccccccCccc-chhhhcCCCCCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 022020 85 QPLKNQFFDQETNQQAHG-EAYSLVGPETEDDLDPEKPLCGPNVWPSADVLPGWKETMLRYQQEALNLGRKIGRIIALAL 163 (304)
Q Consensus 85 ~~~~e~~~~~~~~~~~d~-E~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~la~~ll~~l~~~L 163 (304)
..... . .. ...+| |.+. +...|.. ...|.||+. +++||+++++|+++|.+|+.+|+++|+++|
T Consensus 143 ~~~~~-~--~~--~~~~~~e~~~-~~~~p~~--------~~~~~WP~~--~~~fr~~~~~Y~~~~~~L~~~ll~~la~~L 206 (374)
T PLN02947 143 TSFNQ-N--KD--AVFCWRDFLK-LVCHPLS--------DVLPHWPSS--PADLRKVAATYAKATKRLFLELMEAILESL 206 (374)
T ss_pred ccccc-c--cc--cccCceecee-eecCCcc--------cccccCccc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 32111 1 11 34456 7776 5433211 136899986 689999999999999999999999999999
Q ss_pred CCCC---cccCCCcccCCCcceEEEEecCCCCCCCCcccccccccccCCCceeEEeeCCCCceeEEeCCCCCCCceEEcc
Q 022020 164 DLDV---DFFGKPEILGNAMPYVSFNHYGVQDADPSKEYILGTPAHSDPSLITLLATDEVPGLQICRNIHANPRVWENVV 240 (304)
Q Consensus 164 gl~~---~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~~HtD~~~lTll~~d~~~GLqv~~~~~~~~~~W~~v~ 240 (304)
|+++ ++|. +.+....+.||+||||||+.. + ..+|+++|||+|+||||+||+++||||+.+ |+|++|+
T Consensus 207 gl~~~~~~~~~--~~~~~~~~~lrln~YPp~p~~-~--~~~G~~~HTD~g~lTlL~Qd~v~GLQV~~~-----g~Wi~V~ 276 (374)
T PLN02947 207 GIVKRGSDELL--EEFEAGSQMMVVNCYPACPEP-E--LTLGMPPHSDYGFLTLLLQDEVEGLQIMHA-----GRWVTVE 276 (374)
T ss_pred CCCccchHHHH--HHhcCcceeeeeecCCCCCCc-c--cccCCCCccCCCceEEEEecCCCCeeEeEC-----CEEEeCC
Confidence 9974 3455 555667789999999999753 2 689999999999999999999999999984 5699999
Q ss_pred CCCCeEEEEcchhHHHHhCCcccccccccC-C-CCceeEEEeeecCCCCceeecCCCCCCCCCCCC
Q 022020 241 PLKDAFIVNIGDMLERMSNCVFRSTMHRVL-F-RQERYTIAYFVYPSNDAMIECFPTCKSEEKPPK 304 (304)
Q Consensus 241 ~~~g~~iVn~Gd~l~~~T~G~~~s~~HRV~-~-~~~R~S~~~f~~p~~d~~i~p~~~~~~~~~p~~ 304 (304)
|+||++|||+||+||+||||+|||++|||+ + .++|||++||+.|+.|++|.|+++|+++++|++
T Consensus 277 p~pga~VVNvGD~Lq~~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~i~Pl~~lv~~~~p~~ 342 (374)
T PLN02947 277 PIPGSFVVNVGDHLEIFSNGRYKSVLHRVRVNSTKPRISVASLHSLPFERVVGPAPELVDEQNPRR 342 (374)
T ss_pred CCCCeEEEEeCceeeeeeCCEEeccccccccCCCCCEEEEEEEecCCCCCEEeCChHhcCCCCCCc
Confidence 999999999999999999999999999999 4 679999999999999999999999999998874
No 21
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase
Probab=100.00 E-value=7.5e-67 Score=473.10 Aligned_cols=260 Identities=26% Similarity=0.419 Sum_probs=224.7
Q ss_pred cCCCCceeeCCC---cchHHHHHHHHHHHHhcceEEEEecCCChHHHHHHHHHHHHHhcCCHHHHhhhhhcCCCCcccCC
Q 022020 11 VSAALNCIDLSD---PDIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFELPFDEKMKLWVERNRGYKQPL 87 (304)
Q Consensus 11 ~~~~iPvIDl~~---~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~GY~~~~ 87 (304)
++++||+|||+. .++.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++.. ..+||.+..
T Consensus 3 ~~~~iPvIDls~~~~~~~~~~~~~l~~A~~~~GFF~v~nHGI~~~l~~~~~~~~~~fF~LP~e~K~~~~~-~~~gy~~~~ 81 (321)
T PLN02299 3 KMESFPVIDMEKLNGEERAATMELIKDACENWGFFELVNHGISHELMDEVEKMTKEHYKKCMEQRFKEMV-ASKGLEGVQ 81 (321)
T ss_pred CCCCCCEEECcCCCcccHHHHHHHHHHHHHhcCEEEEECCCCCHHHHHHHHHHHHHHhCCCHHHHHhccc-CCCCccccc
Confidence 356799999963 3466789999999999999999999999999999999999999999999999743 457887654
Q ss_pred cccccccccccCccc-chhhhcCCCCCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 022020 88 KNQFFDQETNQQAHG-EAYSLVGPETEDDLDPEKPLCGPNVWPSADVLPGWKETMLRYQQEALNLGRKIGRIIALALDLD 166 (304)
Q Consensus 88 ~e~~~~~~~~~~~d~-E~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~la~~ll~~l~~~Lgl~ 166 (304)
.+ . ...|+ |.|. ++..|. ...|.||+. ++.||+.+++|++.|.+++.+||++|+++||++
T Consensus 82 ~~-~------~~~d~ke~~~-~~~~~~---------~~~~~wP~~--~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~ 142 (321)
T PLN02299 82 TE-V------EDLDWESTFF-LRHLPE---------SNLADIPDL--DDEYRKVMKDFALELEKLAEELLDLLCENLGLE 142 (321)
T ss_pred cc-C------CCcCHHHHcc-cccCCc---------cccccCccc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 43 1 34578 9888 752221 235789986 689999999999999999999999999999999
Q ss_pred CcccCCCcccC---CCcceEEEEecCCCCCCCCcccccccccccCCCceeEEeeC-CCCceeEEeCCCCCCCceEEccCC
Q 022020 167 VDFFGKPEILG---NAMPYVSFNHYGVQDADPSKEYILGTPAHSDPSLITLLATD-EVPGLQICRNIHANPRVWENVVPL 242 (304)
Q Consensus 167 ~~~~~~~~~~~---~~~~~lr~~~Yp~~~~~~~~~~~~~~~~HtD~~~lTll~~d-~~~GLqv~~~~~~~~~~W~~v~~~ 242 (304)
+++|. +.+. ...+.||++||||++... ...|+++|||+|+||||+|+ .++||||+.+ |+|++|+|.
T Consensus 143 ~~~f~--~~~~~~~~~~~~lRl~~YPp~~~~~---~~~G~~~HTD~g~lTlL~qd~~v~GLQV~~~-----g~Wi~V~p~ 212 (321)
T PLN02299 143 KGYLK--KAFHGSKGPTFGTKVSNYPPCPKPD---LVKGLRAHTDAGGIILLFQDDKVSGLQLLKD-----GEWVDVPPM 212 (321)
T ss_pred HHHHH--HHhcCCCCccceeeeEecCCCCCcc---cccCccCccCCCeEEEEEecCCCCCcCcccC-----CeEEECCCC
Confidence 99997 6553 245689999999987532 56899999999999999997 5999999843 679999999
Q ss_pred CCeEEEEcchhHHHHhCCcccccccccC-C-CCceeEEEeeecCCCCceeecCCCCCCCC
Q 022020 243 KDAFIVNIGDMLERMSNCVFRSTMHRVL-F-RQERYTIAYFVYPSNDAMIECFPTCKSEE 300 (304)
Q Consensus 243 ~g~~iVn~Gd~l~~~T~G~~~s~~HRV~-~-~~~R~S~~~f~~p~~d~~i~p~~~~~~~~ 300 (304)
||++|||+||+|++||||+|||++|||+ + .++|||++||+.|+.|++|.|+++|++++
T Consensus 213 pg~lvVNiGD~l~~~Tng~~kS~~HRVv~~~~~~R~Si~~F~~p~~d~~i~pl~~~v~~~ 272 (321)
T PLN02299 213 RHSIVVNLGDQLEVITNGKYKSVMHRVVAQTDGNRMSIASFYNPGSDAVIYPAPALVEKE 272 (321)
T ss_pred CCeEEEEeCHHHHHHhCCceecccceeecCCCCCEEEEEEEecCCCCceEeCchHhcCcc
Confidence 9999999999999999999999999999 5 56899999999999999999999999876
No 22
>PLN02365 2-oxoglutarate-dependent dioxygenase
Probab=100.00 E-value=8.5e-66 Score=463.07 Aligned_cols=259 Identities=27% Similarity=0.375 Sum_probs=218.2
Q ss_pred CCCceeeCCCcchHHHHHHHHHHHHhcceEEEEecCCChHHHHHHHHHHHHHhcCCHHHHhhhhhc-CCCCcccCCcccc
Q 022020 13 AALNCIDLSDPDIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFELPFDEKMKLWVE-RNRGYKQPLKNQF 91 (304)
Q Consensus 13 ~~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~GY~~~~~e~~ 91 (304)
..||+|||+... ..+++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ..+||.+.+.+
T Consensus 4 ~~iPvIDls~~~--~~~~~l~~Ac~~~GfF~l~nHGi~~~l~~~~~~~~~~FF~LP~e~K~~~~~~~~~~GY~~~~~~-- 79 (300)
T PLN02365 4 VNIPTIDLEEFP--GQIEKLREACERWGCFRVVNHGVSLSLMAEMKKVVRSLFDLPDEVKRRNTDVILGSGYMAPSEV-- 79 (300)
T ss_pred CCCCEEEChhhH--HHHHHHHHHHHHCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhccCCCCCCCCCCcCCC--
Confidence 359999998642 2468999999999999999999999999999999999999999999997544 66899875543
Q ss_pred cccccccCccc-chhhhcCCCCCCCCCCCCCCCCCCCCCCC-CCcccHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CCc
Q 022020 92 FDQETNQQAHG-EAYSLVGPETEDDLDPEKPLCGPNVWPSA-DVLPGWKETMLRYQQEALNLGRKIGRIIALALDL-DVD 168 (304)
Q Consensus 92 ~~~~~~~~~d~-E~~~~~~~~~~~~~~~~~~~~~~n~wP~~-~~~~~f~~~~~~y~~~~~~la~~ll~~l~~~Lgl-~~~ 168 (304)
.++ |.|. +...... ..++.||.. +.+|+||+.+++|+++|.+|+.+|+++|+++||+ +++
T Consensus 80 --------~~~~e~~~-~~~~~~~--------~~~~~~~~~~~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~ 142 (300)
T PLN02365 80 --------NPLYEALG-LYDMASP--------QAVDTFCSQLDASPHQRETIKKYAKAIHDLAMDLARKLAESLGLVEGD 142 (300)
T ss_pred --------CCchhhee-cccccCc--------hhhhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChH
Confidence 234 7776 5421000 012334321 1147899999999999999999999999999999 777
Q ss_pred ccCCCcccCCCcceEEEEecCCCCCCCCcccccccccccCCCceeEEeeC-CCCceeEEeCCCCCCCceEEccCCCCeEE
Q 022020 169 FFGKPEILGNAMPYVSFNHYGVQDADPSKEYILGTPAHSDPSLITLLATD-EVPGLQICRNIHANPRVWENVVPLKDAFI 247 (304)
Q Consensus 169 ~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~~HtD~~~lTll~~d-~~~GLqv~~~~~~~~~~W~~v~~~~g~~i 247 (304)
+|+ +. .+.||++|||+++.. + ..+|+++|||+|+||||+|| .++||||+.+++ |+|++|+|.||++|
T Consensus 143 ~f~--~~----~~~lr~~~YP~~p~~--~-~~~g~~~HtD~g~lTlL~qd~~~~GLqV~~~~~---g~Wi~V~p~pga~v 210 (300)
T PLN02365 143 FFQ--GW----PSQFRINKYNFTPET--V-GSSGVQIHTDSGFLTILQDDENVGGLEVMDPSS---GEFVPVDPLPGTLL 210 (300)
T ss_pred HHh--hc----ccceeeeecCCCCCc--c-ccccccCccCCCceEEEecCCCcCceEEEECCC---CeEEecCCCCCeEE
Confidence 887 42 478999999998753 2 67899999999999999998 499999998732 78999999999999
Q ss_pred EEcchhHHHHhCCcccccccccC-C-CCceeEEEeeecCCCCceeecCCCCCCCCCCCC
Q 022020 248 VNIGDMLERMSNCVFRSTMHRVL-F-RQERYTIAYFVYPSNDAMIECFPTCKSEEKPPK 304 (304)
Q Consensus 248 Vn~Gd~l~~~T~G~~~s~~HRV~-~-~~~R~S~~~f~~p~~d~~i~p~~~~~~~~~p~~ 304 (304)
||+||+||+||||+|||++|||+ + +.+|||++||+.|+.|++|.|+++|+++++|++
T Consensus 211 VNiGD~l~~~TNG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~p~~~~v~~~~p~~ 269 (300)
T PLN02365 211 VNLGDVATAWSNGRLCNVKHRVQCKEATMRISIASFLLGPKDDDVEAPPEFVDAEHPRL 269 (300)
T ss_pred EEhhHHHHHHhCCceecccceeEcCCCCCEEEEEEEecCCCCCeEeCCHHHcCCCCCcc
Confidence 99999999999999999999999 5 568999999999999999999999999888764
No 23
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=100.00 E-value=2.6e-65 Score=461.64 Aligned_cols=269 Identities=36% Similarity=0.616 Sum_probs=228.2
Q ss_pred cCCCCceeeCCCc-----chHHHHHHHHHHHHhcceEEEEecCCChHHHHHHHHHHHHHhcCCHHHHhhhhhc--CCCCc
Q 022020 11 VSAALNCIDLSDP-----DIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFELPFDEKMKLWVE--RNRGY 83 (304)
Q Consensus 11 ~~~~iPvIDl~~~-----~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~--~~~GY 83 (304)
...+||+|||+.. .+..++++|++||++||||||+|||||.++++++++.+++||+||.|+|+++... ...||
T Consensus 14 ~~~~iPvIDls~~~~~~~~~~~~~~~i~~Ace~wGfFqviNHGI~~~l~~~~~~~~~~fF~lP~eeK~k~~~~~~~~~gY 93 (322)
T KOG0143|consen 14 SELDIPVIDLSCLDSDDPGREEVVEKLREACEEWGFFQVINHGISLELLDKVKEASKEFFELPLEEKLKVASEPGKYRGY 93 (322)
T ss_pred cCCCcCeEECCCCCCcchhHHHHHHHHHHHHHHCCeeEEEcCCCCHHHHHHHHHHHHHHhcCCHHHHHhhccCCCCcccc
Confidence 4568999999732 2677899999999999999999999999999999999999999999999999876 46888
Q ss_pred ccCCcccccccccccCccc-chhhhcCCCCCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 022020 84 KQPLKNQFFDQETNQQAHG-EAYSLVGPETEDDLDPEKPLCGPNVWPSADVLPGWKETMLRYQQEALNLGRKIGRIIALA 162 (304)
Q Consensus 84 ~~~~~e~~~~~~~~~~~d~-E~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~la~~ll~~l~~~ 162 (304)
...... ... ...+| +.+. +...|.. ...++.||+. ++.||++|++|.++|.+++..|+++|+++
T Consensus 94 ~~~~~~---~~~--~~~~w~d~~~-~~~~p~~-------~~~~~~wp~~--p~~~re~~~eY~~~~~~L~~~l~~~l~es 158 (322)
T KOG0143|consen 94 GTSFIL---SPL--KELDWRDYLT-LLSAPES-------SFDPNLWPEG--PPEFRETMEEYAKEVMELSEKLLRLLSES 158 (322)
T ss_pred cccccc---ccc--ccccchhhee-eeccCcc-------ccCcccCccc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 764322 111 33445 5554 3222221 1567899997 78999999999999999999999999999
Q ss_pred CCCCCcccCCCcccCC-CcceEEEEecCCCCCCCCcccccccccccCCCceeEEeeC-CCCceeEEeCCCCCCCceEEcc
Q 022020 163 LDLDVDFFGKPEILGN-AMPYVSFNHYGVQDADPSKEYILGTPAHSDPSLITLLATD-EVPGLQICRNIHANPRVWENVV 240 (304)
Q Consensus 163 Lgl~~~~~~~~~~~~~-~~~~lr~~~Yp~~~~~~~~~~~~~~~~HtD~~~lTll~~d-~~~GLqv~~~~~~~~~~W~~v~ 240 (304)
||+++.++. +.+.. ....||+||||||+... .++|+++|||.++||+|+|| +++||||+. .+ |+|++|+
T Consensus 159 lgl~~~~~~--~~~~~~~~~~~r~n~Yp~cp~pe---~~lGl~~HtD~~~lTiLlqd~~V~GLQv~~-~d---g~Wi~V~ 229 (322)
T KOG0143|consen 159 LGLEPEYLE--KLFGETGGQVMRLNYYPPCPEPE---LTLGLGAHTDKSFLTILLQDDDVGGLQVFT-KD---GKWIDVP 229 (322)
T ss_pred cCCChHHHH--HhhCCccceEEEEeecCCCcCcc---ccccccCccCcCceEEEEccCCcCceEEEe-cC---CeEEECC
Confidence 999876555 55555 56799999999998643 79999999999999999998 899999997 22 6799999
Q ss_pred CCCCeEEEEcchhHHHHhCCcccccccccC-CC-CceeEEEeeecCCCCceeecCCCCCCCCCCCC
Q 022020 241 PLKDAFIVNIGDMLERMSNCVFRSTMHRVL-FR-QERYTIAYFVYPSNDAMIECFPTCKSEEKPPK 304 (304)
Q Consensus 241 ~~~g~~iVn~Gd~l~~~T~G~~~s~~HRV~-~~-~~R~S~~~f~~p~~d~~i~p~~~~~~~~~p~~ 304 (304)
|+||++||||||+||+||||+|||+.|||+ ++ ++|+|+|+|+.|+.|.+|.|+++++++. |++
T Consensus 230 P~p~a~vVNiGD~l~~lSNG~ykSv~HRV~~n~~~~R~Sia~F~~p~~d~~i~p~~elv~~~-~~~ 294 (322)
T KOG0143|consen 230 PIPGAFVVNIGDMLQILSNGRYKSVLHRVVVNGEKERISVAFFVFPPLDKVIGPPEELVDEE-PPK 294 (322)
T ss_pred CCCCCEEEEcccHHhHhhCCcccceEEEEEeCCCCceEEEEEEecCCCCceecChhhhCCCC-CCc
Confidence 999999999999999999999999999999 65 5699999999999999999999999887 654
No 24
>PLN02403 aminocyclopropanecarboxylate oxidase
Probab=100.00 E-value=4.5e-64 Score=450.81 Aligned_cols=254 Identities=28% Similarity=0.423 Sum_probs=214.3
Q ss_pred CCceeeCCC---cchHHHHHHHHHHHHhcceEEEEecCCChHHHHHHHHHHHHHhcCCHHHHhhhhhcCCCCcccCCccc
Q 022020 14 ALNCIDLSD---PDIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFELPFDEKMKLWVERNRGYKQPLKNQ 90 (304)
Q Consensus 14 ~iPvIDl~~---~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~GY~~~~~e~ 90 (304)
+||+|||+. ..+.+++++|.+||++||||||+||||+.++++++++.++.||+||.|+|. +......++...+..
T Consensus 2 ~iPvIDls~~~~~~~~~~~~~l~~Ac~~~GFf~v~nHGI~~~l~~~~~~~~~~FF~LP~e~k~-~~~~~~~~~~~~~~~- 79 (303)
T PLN02403 2 EIPVIDFDQLDGEKRSKTMSLLHQACEKWGFFQVENHGIDKKLMEKVKQLVNSHYEENLKESF-YESEIAKALDNEGKT- 79 (303)
T ss_pred CCCeEeCccCCcccHHHHHHHHHHHHHhCceEEEECCCCCHHHHHHHHHHHHHHhcCCHHHHh-hcccccCcccccCCC-
Confidence 699999964 346778999999999999999999999999999999999999999999986 221121222211111
Q ss_pred ccccccccCccc-chhhhcCCCCCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcc
Q 022020 91 FFDQETNQQAHG-EAYSLVGPETEDDLDPEKPLCGPNVWPSADVLPGWKETMLRYQQEALNLGRKIGRIIALALDLDVDF 169 (304)
Q Consensus 91 ~~~~~~~~~~d~-E~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~ 169 (304)
...|+ |.|. ++..|. ...|.||+. +|+||+++++|+++|.+++..|+++|+++||+++++
T Consensus 80 -------~~~d~kE~~~-~~~~p~---------~~~~~wP~~--~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~ 140 (303)
T PLN02403 80 -------SDVDWESSFF-IWHRPT---------SNINEIPNL--SEDLRKTMDEYIAQLIKLAEKLSELMSENLGLDKDY 140 (303)
T ss_pred -------CCccHhhhcc-cccCCc---------cchhhCCCC--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 44577 9998 764321 246889975 689999999999999999999999999999999999
Q ss_pred cCCCcccC---CCcceEEEEecCCCCCCCCcccccccccccCCCceeEEeeC-CCCceeEEeCCCCCCCceEEccCCC-C
Q 022020 170 FGKPEILG---NAMPYVSFNHYGVQDADPSKEYILGTPAHSDPSLITLLATD-EVPGLQICRNIHANPRVWENVVPLK-D 244 (304)
Q Consensus 170 ~~~~~~~~---~~~~~lr~~~Yp~~~~~~~~~~~~~~~~HtD~~~lTll~~d-~~~GLqv~~~~~~~~~~W~~v~~~~-g 244 (304)
|. +.+. ...+.||++|||+++.. + ...|+++|||+|+||||+|+ .++||||+.. |+|++|+|.| |
T Consensus 141 f~--~~~~~~~~~~~~lrl~~YP~~~~~--~-~~~G~~~HtD~g~lTlL~q~~~v~GLqV~~~-----g~Wi~V~p~p~~ 210 (303)
T PLN02403 141 IK--EAFSGNKGPSVGTKVAKYPECPRP--E-LVRGLREHTDAGGIILLLQDDQVPGLEFLKD-----GKWVPIPPSKNN 210 (303)
T ss_pred HH--HHhccCCCccceeeeEcCCCCCCc--c-cccCccCccCCCeEEEEEecCCCCceEeccC-----CeEEECCCCCCC
Confidence 88 6554 34457999999998642 2 56899999999999999997 5999999743 6799999999 6
Q ss_pred eEEEEcchhHHHHhCCcccccccccC-C-CCceeEEEeeecCCCCceeecCCCCCC
Q 022020 245 AFIVNIGDMLERMSNCVFRSTMHRVL-F-RQERYTIAYFVYPSNDAMIECFPTCKS 298 (304)
Q Consensus 245 ~~iVn~Gd~l~~~T~G~~~s~~HRV~-~-~~~R~S~~~f~~p~~d~~i~p~~~~~~ 298 (304)
++|||+||+||+||||+|+|++|||+ + +++|||++||+.|+.|++|.|+++++.
T Consensus 211 ~lvVNvGD~L~~~Tng~~~S~~HRVv~~~~~~R~Si~~F~~p~~d~~i~pl~~~~~ 266 (303)
T PLN02403 211 TIFVNTGDQLEVLSNGRYKSTLHRVMADKNGSRLSIATFYNPAGDAIISPAPKLLY 266 (303)
T ss_pred EEEEEehHHHHHHhCCeeecccceeecCCCCCEEEEEEEEcCCCCCeEeCchhhCC
Confidence 99999999999999999999999999 5 568999999999999999999999875
No 25
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=4e-63 Score=451.14 Aligned_cols=259 Identities=26% Similarity=0.428 Sum_probs=210.6
Q ss_pred cCCCCceeeCCCcchHHHHHHHHHHHHhcceEEEEecCCChHHHHHHHHHHHHHhcCCHHHHhhhhh-cCCC----Cccc
Q 022020 11 VSAALNCIDLSDPDIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFELPFDEKMKLWV-ERNR----GYKQ 85 (304)
Q Consensus 11 ~~~~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~-~~~~----GY~~ 85 (304)
...+||+|||+.. .+++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++.. .... ||..
T Consensus 35 ~~~~IPvIDls~~----~~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~s~~FF~LP~eeK~k~~~~~~~~~~~~g~~~ 110 (341)
T PLN02984 35 KDIDIPVIDMECL----DMEKLREACKDWGIFRLENHGIPLTLMSQLKEISESLLSLPFESKRELFGVNSPLSYFWGTPA 110 (341)
T ss_pred ccCCCCeEeCcHH----HHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhhcccCCCCccccCccc
Confidence 4567999999754 35899999999999999999999999999999999999999999999852 2222 3322
Q ss_pred CCccc--ccccccccCccc-chhhhcCCCCCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 022020 86 PLKNQ--FFDQETNQQAHG-EAYSLVGPETEDDLDPEKPLCGPNVWPSADVLPGWKETMLRYQQEALNLGRKIGRIIALA 162 (304)
Q Consensus 86 ~~~e~--~~~~~~~~~~d~-E~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~la~~ll~~l~~~ 162 (304)
...+. ..........|+ |.|. ++..+.. ...+.||..+.+|+||+++++|+++|.+|+..||++||++
T Consensus 111 ~~~~~~~~~~~~~~~~~D~kE~f~-~~~~~~~--------~~~~~p~~~~~~p~fr~~~~~y~~~~~~La~~ll~~lA~~ 181 (341)
T PLN02984 111 LTPSGKALSRGPQESNVNWVEGFN-IPLSSLS--------LLQTLSCSDPKLESFRVLMEEYGKHLTRIAVTLFEAIAKT 181 (341)
T ss_pred ccccccccccccccCCCCeeeEEe-CcCCchh--------hhhhcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11110 000000125688 9998 8643111 0111122222368999999999999999999999999999
Q ss_pred CCCC--CcccCCCcccCCCcceEEEEecCCCCCCCCcccccccccccCCCceeEEeeCCCCceeEEeCCCCCCCceEEcc
Q 022020 163 LDLD--VDFFGKPEILGNAMPYVSFNHYGVQDADPSKEYILGTPAHSDPSLITLLATDEVPGLQICRNIHANPRVWENVV 240 (304)
Q Consensus 163 Lgl~--~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~~HtD~~~lTll~~d~~~GLqv~~~~~~~~~~W~~v~ 240 (304)
||++ +++|. +.+..+.+.||++||||++.. + ..+|+++|||+|+||||+||+++||||+.. |+|++|+
T Consensus 182 Lgl~~~~~~f~--~~~~~~~~~lRl~~YPp~~~~--~-~~~g~~aHTD~g~lTlL~Qd~v~GLQV~~~-----g~Wv~V~ 251 (341)
T PLN02984 182 LSLELSGDQKM--SYLSESTGVIRVYRYPQCSNE--A-EAPGMEVHTDSSVISILNQDEVGGLEVMKD-----GEWFNVK 251 (341)
T ss_pred cCCCcchhHHH--HHhcCccceEEEEeCCCCCCc--c-cccCccCccCCCceEEEEeCCCCCeeEeeC-----CceEECC
Confidence 9999 88998 777788889999999998753 2 679999999999999999999999999853 5699999
Q ss_pred CCCCeEEEEcchhHHHHhCCcccccccccC---CCCceeEEEeeecCCCCceeec
Q 022020 241 PLKDAFIVNIGDMLERMSNCVFRSTMHRVL---FRQERYTIAYFVYPSNDAMIEC 292 (304)
Q Consensus 241 ~~~g~~iVn~Gd~l~~~T~G~~~s~~HRV~---~~~~R~S~~~f~~p~~d~~i~p 292 (304)
|+||++|||+||+||+||||+|||++|||+ +.++|||++||+.|+.|++|.|
T Consensus 252 p~pgalVVNiGD~Le~wTNg~~kSt~HRVv~~~~~~~R~Sia~F~~P~~d~~i~p 306 (341)
T PLN02984 252 PIANTLVVNLGDMMQVISDDEYKSVLHRVGKRNKKKERYSICYFVFPEEDCVIKS 306 (341)
T ss_pred CCCCeEEEECChhhhhhcCCeeeCCCCccccCCCCCCeEEEEEEecCCCCCEEcc
Confidence 999999999999999999999999999996 3569999999999999999986
No 26
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=2.5e-56 Score=392.85 Aligned_cols=225 Identities=24% Similarity=0.395 Sum_probs=191.9
Q ss_pred HHHHHHHHhc-CCHHHHhhhhhc----CCCCcccCCcccccccccccCccc-chhhhcCCCCCCCCCCCCCCCCCCCCCC
Q 022020 57 VFAQSKKFFE-LPFDEKMKLWVE----RNRGYKQPLKNQFFDQETNQQAHG-EAYSLVGPETEDDLDPEKPLCGPNVWPS 130 (304)
Q Consensus 57 ~~~~~~~fF~-lp~e~K~~~~~~----~~~GY~~~~~e~~~~~~~~~~~d~-E~~~~~~~~~~~~~~~~~~~~~~n~wP~ 130 (304)
|.+.+++||+ ||.|+|+++... .++||.....+ ..... ...|+ |.|. +...|.. ...+|.||+
T Consensus 1 ~~~~~~~FF~~LP~eeK~~~~~~~~~~~~~GY~~~~~~-~~~~~--~~~d~kE~~~-~~~~p~~-------~~~~n~wP~ 69 (262)
T PLN03001 1 MRSLGLSFFKDSPMEEKLRYACDPGSAASEGYGSRMLL-GAKDD--TVLDWRDFFD-HHTFPLS-------RRNPSHWPD 69 (262)
T ss_pred ChHHHHHHHhhCCHHHHHHhhcCCCCCCcccccccccc-ccCCC--CccCchheeE-eeecCcc-------ccchhhCCC
Confidence 3577899997 999999998765 36799543322 11111 45688 9998 7533221 135799998
Q ss_pred CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCcccCCCcceEEEEecCCCCCCCCcccccccccccCCC
Q 022020 131 ADVLPGWKETMLRYQQEALNLGRKIGRIIALALDLDVDFFGKPEILGNAMPYVSFNHYGVQDADPSKEYILGTPAHSDPS 210 (304)
Q Consensus 131 ~~~~~~f~~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~~HtD~~ 210 (304)
. +|.|++++++|+++|.+|+.+|+++|+++||+++++|. +.+....+.||++||||++.. + ..+|+++|||+|
T Consensus 70 ~--~~~f~~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~--~~~~~~~~~lrl~~YP~~~~~--~-~~~g~~~HtD~g 142 (262)
T PLN03001 70 F--PPDYREVVGEYGDCMKALAQKLLAFISESLGLPCSCIE--DAVGDFYQNITVSYYPPCPQP--E-LTLGLQSHSDFG 142 (262)
T ss_pred C--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH--HHhcCcchhheeecCCCCCCc--c-cccCCcCCcCCC
Confidence 6 68999999999999999999999999999999999998 777777788999999998753 2 689999999999
Q ss_pred ceeEEeeCCCCceeEEeCCCCCCCceEEccCCCCeEEEEcchhHHHHhCCcccccccccC-C-CCceeEEEeeecCCCCc
Q 022020 211 LITLLATDEVPGLQICRNIHANPRVWENVVPLKDAFIVNIGDMLERMSNCVFRSTMHRVL-F-RQERYTIAYFVYPSNDA 288 (304)
Q Consensus 211 ~lTll~~d~~~GLqv~~~~~~~~~~W~~v~~~~g~~iVn~Gd~l~~~T~G~~~s~~HRV~-~-~~~R~S~~~f~~p~~d~ 288 (304)
+||||+||+++||||+.. |+|++|+|.||++||||||+|++||||+|+|++|||+ + .++|||++||+.|+.|+
T Consensus 143 ~lTlL~qd~v~GLqV~~~-----g~Wi~V~p~p~a~vVNiGD~l~~~tng~~~S~~HRVv~~~~~~R~Sia~F~~p~~d~ 217 (262)
T PLN03001 143 AITLLIQDDVEGLQLLKD-----AEWLMVPPISDAILIIIADQTEIITNGNYKSAQHRAIANANKARLSVATFHDPAKTA 217 (262)
T ss_pred eeEEEEeCCCCceEEeeC-----CeEEECCCCCCcEEEEccHHHHHHhCCccccccceEEcCCCCCEEEEEEEEcCCCCC
Confidence 999999999999999853 5699999999999999999999999999999999999 5 57899999999999999
Q ss_pred eeecCCCCCCCCCCCC
Q 022020 289 MIECFPTCKSEEKPPK 304 (304)
Q Consensus 289 ~i~p~~~~~~~~~p~~ 304 (304)
+|.|+++|+++++|++
T Consensus 218 ~i~p~~e~v~~~~p~~ 233 (262)
T PLN03001 218 KIAPASALSTESFPPR 233 (262)
T ss_pred EEeCChHhcCCCCCCc
Confidence 9999999999988864
No 27
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=99.92 E-value=6.7e-26 Score=176.41 Aligned_cols=111 Identities=42% Similarity=0.817 Sum_probs=91.7
Q ss_pred CceeeCC--CcchHHHHHHHHHHHHhcceEEEEecCCChHHHHHHHHHHHHHhcCCHHHHhhhhhc-CCCCcccCCcccc
Q 022020 15 LNCIDLS--DPDIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFELPFDEKMKLWVE-RNRGYKQPLKNQF 91 (304)
Q Consensus 15 iPvIDl~--~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~GY~~~~~e~~ 91 (304)
||||||+ ...+..++++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++... .++||.+.+.+ .
T Consensus 1 iPvIDls~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~l~~~~~~~~~~fF~lp~e~K~~~~~~~~~~Gy~~~~~~-~ 79 (116)
T PF14226_consen 1 IPVIDLSPDPADREEVAEQLRDACEEWGFFYLVNHGIPQELIDRVFAAAREFFALPLEEKQKYARSPSYRGYSPPGSE-S 79 (116)
T ss_dssp --EEEHGGCHHHHHHHHHHHHHHHHHTSEEEEESSSSSHHHHHHHHHHHHHHHCSHHHHHHHHBCCTTCSEEEESEEE-C
T ss_pred CCeEECCCCCccHHHHHHHHHHHHHhCCEEEEecccccchhhHHHHHHHHHHHHhhHHHHHHhcCCCCCcccccCCcc-c
Confidence 8999998 456788999999999999999999999999999999999999999999999999666 89999998877 4
Q ss_pred cccccccCccc-chhhhcCCC-CCCCCCCCCCCCCCCCCCCC
Q 022020 92 FDQETNQQAHG-EAYSLVGPE-TEDDLDPEKPLCGPNVWPSA 131 (304)
Q Consensus 92 ~~~~~~~~~d~-E~~~~~~~~-~~~~~~~~~~~~~~n~wP~~ 131 (304)
... +..|+ |+|. ++.+ +.+++. ......+|+||++
T Consensus 80 ~~~---~~~d~~E~~~-~~~~~~~~~p~-~~~~~~~n~WP~~ 116 (116)
T PF14226_consen 80 TDG---GKPDWKESFN-IGPDLPEDDPA-YPPLYGPNIWPDE 116 (116)
T ss_dssp CTT---CCCCSEEEEE-EECC-STTCHH-TGCTS-GGGS-TT
T ss_pred cCC---CCCCceEEeE-EECCCCccccc-cccccCCCCCCCC
Confidence 332 37889 9999 9877 555433 4456899999974
No 28
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit. The holoenzyme has the activity (1.14.11.2 from EC) catalysing the reaction: Procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2. The full enzyme consists of a alpha2 beta2 complex with the alpha subunit contributing most of the parts of the active site []. The family also includes lysyl hydrolases, isopenicillin synthases and AlkB. ; GO: 0016491 oxidoreductase activity, 0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, 0055114 oxidation-reduction process; PDB: 3ON7_D 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=99.91 E-value=3.2e-24 Score=161.92 Aligned_cols=93 Identities=39% Similarity=0.687 Sum_probs=73.8
Q ss_pred ceEEEEecCCCCCCCCcccccccccccCC--CceeEEeeCCCCceeEEeCCCCCCCceEEccCCCCeEEEEcchhHHHHh
Q 022020 181 PYVSFNHYGVQDADPSKEYILGTPAHSDP--SLITLLATDEVPGLQICRNIHANPRVWENVVPLKDAFIVNIGDMLERMS 258 (304)
Q Consensus 181 ~~lr~~~Yp~~~~~~~~~~~~~~~~HtD~--~~lTll~~d~~~GLqv~~~~~~~~~~W~~v~~~~g~~iVn~Gd~l~~~T 258 (304)
+.||+++|++ + . ...++++|+|. +++|+|+|+..+|||++..++ |+.|++.++.++||+||+|++||
T Consensus 2 ~~~~~~~Y~~----~-~-~~~~~~~H~D~~~~~~Til~~~~~~gL~~~~~~~-----~~~v~~~~~~~~v~~G~~l~~~t 70 (98)
T PF03171_consen 2 SQLRLNRYPP----P-E-NGVGIGPHTDDEDGLLTILFQDEVGGLQVRDDGE-----WVDVPPPPGGFIVNFGDALEILT 70 (98)
T ss_dssp -EEEEEEE-S----C-C-GCEEEEEEEES--SSEEEEEETSTS-EEEEETTE-----EEE----TTCEEEEEBHHHHHHT
T ss_pred CEEEEEECCC----c-c-cCCceeCCCcCCCCeEEEEecccchheecccccc-----ccCccCccceeeeeceeeeeccc
Confidence 5799999998 1 1 77899999999 999999999999999999874 99999999999999999999999
Q ss_pred CCcccccccccC-C-CCceeEEEeeecC
Q 022020 259 NCVFRSTMHRVL-F-RQERYTIAYFVYP 284 (304)
Q Consensus 259 ~G~~~s~~HRV~-~-~~~R~S~~~f~~p 284 (304)
||.++|+.|||+ + ...|+|++||++|
T Consensus 71 ~g~~~~~~HrV~~~~~~~R~s~~~f~~p 98 (98)
T PF03171_consen 71 NGRYPATLHRVVPPTEGERYSLTFFLRP 98 (98)
T ss_dssp TTSS----EEEE--STS-EEEEEEEEE-
T ss_pred CCccCCceeeeEcCCCCCEEEEEEEECC
Confidence 999999999999 5 5899999999987
No 29
>PLN03176 flavanone-3-hydroxylase; Provisional
Probab=99.75 E-value=4.4e-18 Score=132.33 Aligned_cols=73 Identities=22% Similarity=0.532 Sum_probs=64.2
Q ss_pred CCCceeeCCC-----cchHHHHHHHHHHHHhcceEEEEecCCChHHHHHHHHHHHHHhcCCHHHHhhhhhc--CCCCccc
Q 022020 13 AALNCIDLSD-----PDIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFELPFDEKMKLWVE--RNRGYKQ 85 (304)
Q Consensus 13 ~~iPvIDl~~-----~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~--~~~GY~~ 85 (304)
.+||+|||+. ..+.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ...||..
T Consensus 36 ~~iPvIDls~~~~~~~~~~~~~~~L~~A~~~~GFf~l~nhGi~~elid~~~~~~~~FF~LP~e~K~k~~~~~~~~~gy~~ 115 (120)
T PLN03176 36 NEIPVISIAGIDDGGEKRAEICNKIVEACEEWGVFQIVDHGVDAKLVSEMTTLAKEFFALPPEEKLRFDMSGGKKGGFIV 115 (120)
T ss_pred CCCCeEECccccCCchHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHhcccCCCccCCcch
Confidence 5799999963 23567899999999999999999999999999999999999999999999998765 4567743
No 30
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A ....
Probab=96.45 E-value=0.004 Score=46.38 Aligned_cols=80 Identities=20% Similarity=0.257 Sum_probs=52.9
Q ss_pred EEEEecCCCCCCCCcccccccccccCC-----CceeEEee--CC-----CCceeEEeCCCCCCCceEEcc-----CCCCe
Q 022020 183 VSFNHYGVQDADPSKEYILGTPAHSDP-----SLITLLAT--DE-----VPGLQICRNIHANPRVWENVV-----PLKDA 245 (304)
Q Consensus 183 lr~~~Yp~~~~~~~~~~~~~~~~HtD~-----~~lTll~~--d~-----~~GLqv~~~~~~~~~~W~~v~-----~~~g~ 245 (304)
|++++|.+ .-.+.+|+|. ..+|+++. +. .|.|++.... ...+....+. |.+|.
T Consensus 1 ~~~~~y~~---------G~~~~~H~D~~~~~~~~~t~llyL~~~~~~~~GG~l~~~~~~-~~~~~~~~~~~~~~~p~~g~ 70 (100)
T PF13640_consen 1 MQLNRYPP---------GGFFGPHTDNSYDPHRRVTLLLYLNDPEWEFEGGELEFYPSK-DSDDVSREVEDFDIVPKPGR 70 (100)
T ss_dssp -EEEEEET---------TEEEEEEESSSCCCSEEEEEEEESS-CS-HCEE--EEETTTS--TSSTCEEEGGGSEE-BTTE
T ss_pred CEEEEECc---------CCEEeeeECCCCCCcceEEEEEEECCCCcccCCCEEEEeccc-cCCCcceEEEeccccCCCCE
Confidence 46788863 3357799999 48888853 22 2568887642 0014466666 99999
Q ss_pred EEEEcchhHHHHhCCcccccccccC-C--CCceeEEEeeec
Q 022020 246 FIVNIGDMLERMSNCVFRSTMHRVL-F--RQERYTIAYFVY 283 (304)
Q Consensus 246 ~iVn~Gd~l~~~T~G~~~s~~HRV~-~--~~~R~S~~~f~~ 283 (304)
+|++-+ ...+|+|. . +..|+++..|+.
T Consensus 71 ~v~F~~-----------~~~~H~v~~v~~~~~R~~l~~~~~ 100 (100)
T PF13640_consen 71 LVIFPS-----------DNSLHGVTPVGEGGRRYSLTFWFH 100 (100)
T ss_dssp EEEEES-----------CTCEEEEEEE-EESEEEEEEEEEE
T ss_pred EEEEeC-----------CCCeecCcccCCCCCEEEEEEEEC
Confidence 998876 55799999 4 469999999863
No 31
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional
Probab=95.28 E-value=0.16 Score=43.91 Aligned_cols=46 Identities=17% Similarity=0.163 Sum_probs=34.9
Q ss_pred CCceeEEeCCCCCCCceEEccCCCCeEEEEcchhHHHHhCCcccccccccC--CCCceeEEEeee
Q 022020 220 VPGLQICRNIHANPRVWENVVPLKDAFIVNIGDMLERMSNCVFRSTMHRVL--FRQERYTIAYFV 282 (304)
Q Consensus 220 ~~GLqv~~~~~~~~~~W~~v~~~~g~~iVn~Gd~l~~~T~G~~~s~~HRV~--~~~~R~S~~~f~ 282 (304)
.|.|.+.+..+ =..|.|..|.+|+.-. +.+|+|. ....||++.+..
T Consensus 129 GGEl~~~~~~g-----~~~Vkp~aG~~vlfps------------~~lH~v~pVt~G~R~~~~~Wi 176 (226)
T PRK05467 129 GGELVIEDTYG-----EHRVKLPAGDLVLYPS------------TSLHRVTPVTRGVRVASFFWI 176 (226)
T ss_pred CCceEEecCCC-----cEEEecCCCeEEEECC------------CCceeeeeccCccEEEEEecH
Confidence 45587776542 3688999999998875 4789999 456899988775
No 32
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro []. Interestingly TET2 is considered as an oncogene, as it is found mutated in some types of cancer []. This entry represents the double-stranded beta helix (DSBH) fold of the 2-oxoglutarate (2OG) - Fe(II) oxygenases. DSBH comprises a part of the catalytic domain in TETS. It is found in many organisms including fruit fly, African malaria mosquito, zebrafish, mouse and human.
Probab=95.18 E-value=0.3 Score=40.35 Aligned_cols=66 Identities=14% Similarity=0.087 Sum_probs=47.8
Q ss_pred cccccccCC----CceeEEeeC----CCCceeEEeC-----CCCCCCceEEccCCCCeEEEEcchhHHHHhCCccccccc
Q 022020 201 LGTPAHSDP----SLITLLATD----EVPGLQICRN-----IHANPRVWENVVPLKDAFIVNIGDMLERMSNCVFRSTMH 267 (304)
Q Consensus 201 ~~~~~HtD~----~~lTll~~d----~~~GLqv~~~-----~~~~~~~W~~v~~~~g~~iVn~Gd~l~~~T~G~~~s~~H 267 (304)
.....|+|. ..+|++..- ..+|+-+... .+ +.|.+.+|++++..|.. -.|
T Consensus 85 r~t~~HrD~~~~~~~~~~~~t~~~gd~~~g~l~lp~~~~~~~g------~~~~~~~GtVl~~~~~~-----------~~H 147 (171)
T PF12851_consen 85 RCTHSHRDTHNMPNGYDVLCTLGRGDYDGGRLELPGLDPNILG------VAFAYQPGTVLIFCAKR-----------ELH 147 (171)
T ss_pred cCccceecCCCCCCCeEEEEecCCccccCceEeccccccccCC------EEEecCCCcEEEEcccc-----------eee
Confidence 456779988 677777652 3467777766 53 88899999999999843 345
Q ss_pred ccC----C---CCceeEEEeeec
Q 022020 268 RVL----F---RQERYTIAYFVY 283 (304)
Q Consensus 268 RV~----~---~~~R~S~~~f~~ 283 (304)
-|. | ...|+|++||++
T Consensus 148 gvtpv~~~~~~~~~R~slvfy~h 170 (171)
T PF12851_consen 148 GVTPVESPNRNHGTRISLVFYQH 170 (171)
T ss_pred ecCcccCCCCCCCeEEEEEEEeE
Confidence 555 1 259999999985
No 33
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues. Mammalian enzymes catalyse hydroxylation of collagen, for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases, requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor.
Probab=94.68 E-value=0.52 Score=38.93 Aligned_cols=82 Identities=22% Similarity=0.197 Sum_probs=54.5
Q ss_pred ceEEEEecCCCCCCCCcccccccccccCCC--------ceeEEee--C-CC-CceeEEeCCCCCCCceEEccCCCCeEEE
Q 022020 181 PYVSFNHYGVQDADPSKEYILGTPAHSDPS--------LITLLAT--D-EV-PGLQICRNIHANPRVWENVVPLKDAFIV 248 (304)
Q Consensus 181 ~~lr~~~Yp~~~~~~~~~~~~~~~~HtD~~--------~lTll~~--d-~~-~GLqv~~~~~~~~~~W~~v~~~~g~~iV 248 (304)
..+++++|.+.. ...+|.|.. .+|+++. + .. |.|.+...+. .....|.|..|.+|+
T Consensus 83 ~~~~~~~Y~~g~---------~~~~H~D~~~~~~~~~r~~T~~~yLn~~~~GG~~~f~~~~~---~~~~~v~P~~G~~v~ 150 (178)
T smart00702 83 EDAQVARYGPGG---------HYGPHVDNFEDDENGDRIATFLLYLNDVEEGGELVFPGLGL---MVCATVKPKKGDLLF 150 (178)
T ss_pred cceEEEEECCCC---------cccCcCCCCCCCCCCCeEEEEEEEeccCCcCceEEecCCCC---ccceEEeCCCCcEEE
Confidence 468889998521 346788866 5888875 2 23 3466655431 235689999999888
Q ss_pred EcchhHHHHhCCcccccccccC--CCCceeEEEeeec
Q 022020 249 NIGDMLERMSNCVFRSTMHRVL--FRQERYTIAYFVY 283 (304)
Q Consensus 249 n~Gd~l~~~T~G~~~s~~HRV~--~~~~R~S~~~f~~ 283 (304)
.-... +.++|.|. ....|+++..+++
T Consensus 151 f~~~~---------~~~~H~v~pv~~G~r~~~~~W~~ 178 (178)
T smart00702 151 FPSGR---------GRSLHGVCPVTRGSRWAITGWIR 178 (178)
T ss_pred EeCCC---------CCccccCCcceeCCEEEEEEEEC
Confidence 65321 16789999 3468999988763
No 34
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional
Probab=93.39 E-value=1.8 Score=36.99 Aligned_cols=86 Identities=10% Similarity=0.029 Sum_probs=47.9
Q ss_pred eEEEEecCCCCCCCCcccccccccccCCC-----ceeEEeeCCCCc-eeEEeCCCCCCCceEEccCCCCeEEEEcchhHH
Q 022020 182 YVSFNHYGVQDADPSKEYILGTPAHSDPS-----LITLLATDEVPG-LQICRNIHANPRVWENVVPLKDAFIVNIGDMLE 255 (304)
Q Consensus 182 ~lr~~~Yp~~~~~~~~~~~~~~~~HtD~~-----~lTll~~d~~~G-Lqv~~~~~~~~~~W~~v~~~~g~~iVn~Gd~l~ 255 (304)
.+-+|+|.+ +. +++.|.|-. ..-+-+.=+.+. +.+..... .+.+..+....|+++|.-|++ +
T Consensus 117 a~LvN~Y~~--------G~-~mg~H~D~~E~~~~~pI~SvSLG~~~~F~~~~~~~--~~~~~~l~L~~Gdllvm~G~s-r 184 (213)
T PRK15401 117 ACLINRYAP--------GA-KLSLHQDKDERDFRAPIVSVSLGLPAVFQFGGLKR--SDPLQRILLEHGDVVVWGGPS-R 184 (213)
T ss_pred EEEEEeccC--------cC-ccccccCCCcccCCCCEEEEeCCCCeEEEecccCC--CCceEEEEeCCCCEEEECchH-h
Confidence 356888984 44 899999942 111111112222 22221111 256899999999999999985 4
Q ss_pred HHhCCcccccccccC-C--CCceeEEEee
Q 022020 256 RMSNCVFRSTMHRVL-F--RQERYTIAYF 281 (304)
Q Consensus 256 ~~T~G~~~s~~HRV~-~--~~~R~S~~~f 281 (304)
.|=+|.-+- .+.. | +..|+++.|-
T Consensus 185 ~~~HgVp~~--~~~~~p~~g~~RINLTFR 211 (213)
T PRK15401 185 LRYHGILPL--KAGEHPLTGECRINLTFR 211 (213)
T ss_pred heeccCCcC--CCCcCCCCCCCeEEEEeE
Confidence 333333221 1111 1 3479999874
No 35
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A ....
Probab=88.80 E-value=2.4 Score=35.35 Aligned_cols=85 Identities=14% Similarity=0.060 Sum_probs=45.0
Q ss_pred eEEEEecCCCCCCCCcccccccccccCCCce-------eEEeeCCCCceeEEeCCCCCCCceEEccCCCCeEEEEcchhH
Q 022020 182 YVSFNHYGVQDADPSKEYILGTPAHSDPSLI-------TLLATDEVPGLQICRNIHANPRVWENVVPLKDAFIVNIGDML 254 (304)
Q Consensus 182 ~lr~~~Yp~~~~~~~~~~~~~~~~HtD~~~l-------Tll~~d~~~GLqv~~~~~~~~~~W~~v~~~~g~~iVn~Gd~l 254 (304)
.+-+|+|.+ +. ++++|.|.-.+ +|-+.. ..-+.+..... .+..+.+...+|+++|+-|++=
T Consensus 98 ~~liN~Y~~--------g~-~i~~H~D~~~~~~~~~I~slSLG~-~~~~~f~~~~~--~~~~~~~~L~~gsl~vm~g~~r 165 (194)
T PF13532_consen 98 QCLINYYRD--------GS-GIGPHSDDEEYGFGPPIASLSLGS-SRVFRFRNKSD--DDEPIEVPLPPGSLLVMSGEAR 165 (194)
T ss_dssp EEEEEEESS--------TT--EEEE---TTC-CCSEEEEEEEES--EEEEEEECGG--TS-EEEEEE-TTEEEEEETTHH
T ss_pred EEEEEecCC--------CC-CcCCCCCcccccCCCcEEEEEEcc-CceEEEeeccC--CCccEEEEcCCCCEEEeChHHh
Confidence 567889984 44 89999998743 222211 11234444321 3579999999999999999886
Q ss_pred HHHhCCcccccccccC----CCCceeEEEe
Q 022020 255 ERMSNCVFRSTMHRVL----FRQERYTIAY 280 (304)
Q Consensus 255 ~~~T~G~~~s~~HRV~----~~~~R~S~~~ 280 (304)
..| .|..+... ... ....|+||.|
T Consensus 166 ~~~-H~I~~~~~-~~~~~~~~~~~RislTf 193 (194)
T PF13532_consen 166 YDW-HGIPPVKK-DTHPSHYVRGRRISLTF 193 (194)
T ss_dssp HHE-EEE-S-SC-EEEESTEE-S-EEEEEE
T ss_pred hhe-eEcccccC-CccccccCCCCEEEEEe
Confidence 665 44433211 000 0237999987
No 36
>TIGR02466 conserved hypothetical protein. This family consists of uncharacterized proteins in Caulobacter crescentus CB15, Bdellovibrio bacteriovorus HD100, Synechococcus sp. WH 8102 (2), Silicibacter pomeroyi DSS-3 (2), and Hyphomonas neptunium ATCC 15444. The context of nearby genes differs substantially between members and does point to any specific biological role.
Probab=87.73 E-value=8.5 Score=32.65 Aligned_cols=36 Identities=17% Similarity=0.172 Sum_probs=29.3
Q ss_pred ceEEccCCCCeEEEEcchhHHHHhCCcccccccccC-C--CCceeEEEeee
Q 022020 235 VWENVVPLKDAFIVNIGDMLERMSNCVFRSTMHRVL-F--RQERYTIAYFV 282 (304)
Q Consensus 235 ~W~~v~~~~g~~iVn~Gd~l~~~T~G~~~s~~HRV~-~--~~~R~S~~~f~ 282 (304)
.|+.|.|.+|.+|++-+. -.|+|. + ..+|+|++|=+
T Consensus 160 ~~~~v~P~~G~lvlFPS~------------L~H~v~p~~~~~~RISiSFNl 198 (201)
T TIGR02466 160 RFVYVPPQEGRVLLFESW------------LRHEVPPNESEEERISVSFNY 198 (201)
T ss_pred ccEEECCCCCeEEEECCC------------CceecCCCCCCCCEEEEEEee
Confidence 489999999999988763 379999 3 46999999854
No 37
>PRK08130 putative aldolase; Validated
Probab=82.69 E-value=1.7 Score=37.22 Aligned_cols=38 Identities=18% Similarity=0.132 Sum_probs=32.9
Q ss_pred CCCceeeCCCcchHHHHHHHHHHHHhcceEEEEecCCC
Q 022020 13 AALNCIDLSDPDIQKSAASLKQACMDSGFFYVINHGIS 50 (304)
Q Consensus 13 ~~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~ 50 (304)
..||++++......++++.+.+++++...+.+.|||+-
T Consensus 126 g~i~v~~y~~~g~~~la~~~~~~l~~~~~vll~nHGvi 163 (213)
T PRK08130 126 GHVPLIPYYRPGDPAIAEALAGLAARYRAVLLANHGPV 163 (213)
T ss_pred CccceECCCCCChHHHHHHHHHHhccCCEEEEcCCCCe
Confidence 46899998766667899999999999999999999954
No 38
>PRK08333 L-fuculose phosphate aldolase; Provisional
Probab=82.61 E-value=1.7 Score=36.26 Aligned_cols=38 Identities=13% Similarity=0.160 Sum_probs=32.8
Q ss_pred CCCceeeCCCcchHHHHHHHHHHHHhcceEEEEecCCC
Q 022020 13 AALNCIDLSDPDIQKSAASLKQACMDSGFFYVINHGIS 50 (304)
Q Consensus 13 ~~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~ 50 (304)
..||++++......++++.+.+++++...+.|.|||+-
T Consensus 119 ~~v~v~~~~~~g~~~la~~~~~~l~~~~~vll~nHGv~ 156 (184)
T PRK08333 119 KKIPILPFRPAGSVELAEQVAEAMKEYDAVIMERHGIV 156 (184)
T ss_pred CCEeeecCCCCCcHHHHHHHHHHhccCCEEEEcCCCCE
Confidence 47999998766667899999999999999999999954
No 39
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A.
Probab=78.46 E-value=3.4 Score=30.62 Aligned_cols=35 Identities=20% Similarity=0.209 Sum_probs=23.5
Q ss_pred CceEEccCCCCeEEEEcchhHHHHhCCcccccccccC-C--CCceeEEEe
Q 022020 234 RVWENVVPLKDAFIVNIGDMLERMSNCVFRSTMHRVL-F--RQERYTIAY 280 (304)
Q Consensus 234 ~~W~~v~~~~g~~iVn~Gd~l~~~T~G~~~s~~HRV~-~--~~~R~S~~~ 280 (304)
..+..+.|.+|.+||+-+. ..|+|. . ..+|+||+|
T Consensus 63 ~~~~~~~p~~G~lvlFPs~------------l~H~v~p~~~~~~Risisf 100 (101)
T PF13759_consen 63 SPYYIVEPEEGDLVLFPSW------------LWHGVPPNNSDEERISISF 100 (101)
T ss_dssp -SEEEE---TTEEEEEETT------------SEEEE----SSS-EEEEEE
T ss_pred CceEEeCCCCCEEEEeCCC------------CEEeccCcCCCCCEEEEEc
Confidence 4588999999999999874 379999 2 459999997
No 40
>PRK05874 L-fuculose-phosphate aldolase; Validated
Probab=76.86 E-value=3 Score=35.86 Aligned_cols=37 Identities=14% Similarity=0.278 Sum_probs=32.7
Q ss_pred CCceeeCCCcchHHHHHHHHHHHHhcceEEEEecCCC
Q 022020 14 ALNCIDLSDPDIQKSAASLKQACMDSGFFYVINHGIS 50 (304)
Q Consensus 14 ~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~ 50 (304)
.||++++......++++.+.+++++...+.|.|||+-
T Consensus 127 ~v~~~~y~~~gs~ela~~v~~~l~~~~~vlL~nHGv~ 163 (217)
T PRK05874 127 DVRCTEYAASGTPEVGRNAVRALEGRAAALIANHGLV 163 (217)
T ss_pred ceeeecCCCCCcHHHHHHHHHHhCcCCEEEEcCCCCe
Confidence 5899998766677899999999999999999999954
No 41
>TIGR00568 alkb DNA alkylation damage repair protein AlkB. Proteins in this family have an as of yet undetermined function in the repair of alkylation damage to DNA. Alignment and family designation based on phylogenomic analysis of Jonathan A. Eisen (PhD Thesis, Stanford University, 1999).
Probab=73.63 E-value=30 Score=28.47 Aligned_cols=62 Identities=13% Similarity=0.108 Sum_probs=36.8
Q ss_pred eEEEEecCCCCCCCCcccccccccccCCCcee----EEe-eCCCCceeEEeCCCCCCCceEEccCCCCeEEEEcchh
Q 022020 182 YVSFNHYGVQDADPSKEYILGTPAHSDPSLIT----LLA-TDEVPGLQICRNIHANPRVWENVVPLKDAFIVNIGDM 253 (304)
Q Consensus 182 ~lr~~~Yp~~~~~~~~~~~~~~~~HtD~~~lT----ll~-~d~~~GLqv~~~~~~~~~~W~~v~~~~g~~iVn~Gd~ 253 (304)
..-+|+|++ + -++++|.|-.-+. |+- .=+.+..-..... ...+....+...+|+++|+-|+.
T Consensus 96 ~~LvN~Y~~--------G-d~mg~H~D~~e~~~~~pI~SvSLG~~r~F~~~~~-~~~~~~~~l~L~sGsllvM~G~s 162 (169)
T TIGR00568 96 ACLVNRYAP--------G-ATLSLHQDRDEPDLRAPLLSVSLGLPAIFLIGGL-KRNDPPKRLRLHSGDVVIMGGES 162 (169)
T ss_pred EEEEEeecC--------C-CccccccccccccCCCCEEEEeCCCCEEEEecCC-cCCCceEEEEeCCCCEEEECCch
Confidence 466899985 3 4689999953321 111 1122222222211 11355889999999999999874
No 42
>PRK06833 L-fuculose phosphate aldolase; Provisional
Probab=72.70 E-value=4.4 Score=34.69 Aligned_cols=50 Identities=16% Similarity=0.276 Sum_probs=36.7
Q ss_pred CCCceeeCCCcchHHHHHHHHHHHHhcceEEEEecCCC--hHHHHHHHHHHH
Q 022020 13 AALNCIDLSDPDIQKSAASLKQACMDSGFFYVINHGIS--KEFMDEVFAQSK 62 (304)
Q Consensus 13 ~~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~--~~~~~~~~~~~~ 62 (304)
..||++++......++++.+.+++++...+.+.|||+- -+.+++++..+.
T Consensus 123 ~~i~~~~y~~~gs~~la~~v~~~l~~~~~vll~nHGv~~~G~~~~eA~~~~e 174 (214)
T PRK06833 123 PNVRCAEYATFGTKELAENAFEAMEDRRAVLLANHGLLAGANNLKNAFNIAE 174 (214)
T ss_pred CCeeeccCCCCChHHHHHHHHHHhCcCCEEEECCCCCEEEeCCHHHHHHHHH
Confidence 46888888766667788999999999999999999954 233444444333
No 43
>PRK08660 L-fuculose phosphate aldolase; Provisional
Probab=71.56 E-value=5.3 Score=33.14 Aligned_cols=37 Identities=16% Similarity=0.111 Sum_probs=30.4
Q ss_pred CCCceeeCCCcchHHHHHHHHHHHHhcceEEEEecCCC
Q 022020 13 AALNCIDLSDPDIQKSAASLKQACMDSGFFYVINHGIS 50 (304)
Q Consensus 13 ~~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~ 50 (304)
..||++ +......++++.+.+++++.-.+.|.|||+-
T Consensus 114 ~~ipv~-~~~~~~~~la~~v~~~l~~~~~vll~nHG~~ 150 (181)
T PRK08660 114 GTIPVV-GGDIGSGELAENVARALSEHKGVVVRGHGTF 150 (181)
T ss_pred CCEeEE-eCCCCCHHHHHHHHHHHhhCCEEEEcCCCce
Confidence 468998 5445566789999999999999999999954
No 44
>PRK06755 hypothetical protein; Validated
Probab=70.46 E-value=5.7 Score=33.92 Aligned_cols=37 Identities=11% Similarity=0.085 Sum_probs=31.2
Q ss_pred CCceeeCCCcchHHHHHHHHHHHHhcceEEEEecCCC
Q 022020 14 ALNCIDLSDPDIQKSAASLKQACMDSGFFYVINHGIS 50 (304)
Q Consensus 14 ~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~ 50 (304)
.||+|++.....+++++.+.+++++...+.|.|||+-
T Consensus 136 ~IPiv~~~~~~~~~la~~~~~~~~~~~avLl~~HGv~ 172 (209)
T PRK06755 136 TIPIVEDEKKFADLLENNVPNFIEGGGVVLVHNYGMI 172 (209)
T ss_pred EEEEEeCCCchhHHHHHHHHhhccCCCEEEEcCCCeE
Confidence 5999998766667788888888888899999999965
No 45
>PRK08087 L-fuculose phosphate aldolase; Provisional
Probab=70.24 E-value=5.5 Score=34.08 Aligned_cols=37 Identities=11% Similarity=0.197 Sum_probs=31.6
Q ss_pred CCceeeCCCcchHHHHHHHHHHHHhcceEEEEecCCC
Q 022020 14 ALNCIDLSDPDIQKSAASLKQACMDSGFFYVINHGIS 50 (304)
Q Consensus 14 ~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~ 50 (304)
.||++.+......++++.+.+++.+...+.+.|||+-
T Consensus 122 ~v~~~~y~~~gs~~la~~~~~~l~~~~~vLl~nHGv~ 158 (215)
T PRK08087 122 SIPCAPYATFGTRELSEHVALALKNRKATLLQHHGLI 158 (215)
T ss_pred CceeecCCCCCCHHHHHHHHHHhCcCCEEEecCCCCE
Confidence 5899988666667789999999999999999999964
No 46
>PF00596 Aldolase_II: Class II Aldolase and Adducin N-terminal domain; InterPro: IPR001303 This entry represents the alpha/beta/alpha domain found in class II aldolases and adducin, usually at the N terminus. These proteins form part of a family that includes: rhamnulose-1-phosphate aldolase (4.1.2.19 from EC), L-fuculose phosphate aldolase (4.1.2.17 from EC) [, ] that is involved in the third step in fucose metabolism, L-ribulose- 5-phosphate 4-epimerase (5.1.3.4 from EC) involved in the third step of L-arabinose catabolism, a probable sugar isomerase SgbE, hypothetical proteins and the metazoan adducins which have not been ascribed any enzymatic function but which play a role in cell membrane cytoskeleton organisation. Adducins are members of the Ig superfamily and encode cell surface sialoglycoproteins expressed by cytokine-activated endothelium. This type I membrane protein mediates leukocyte-endothelial cell adhesion and signal transduction, and may play a role in the development of artherosclerosis and rheumatoid arthritis. Adducin is a cell-membrane skeletal protein that was first purified from human erythrocytes and subsequently isolated from bovine brain membranes. Isoforms of this protein have been detected in lung, kidney, testes and liver. Erythrocyte adducin is a 200kDa heterodimer protein, composed of alpha and beta subunits, present at about 30,000 copies per cell. It binds with high affinity to Ca(2+)/calmodulin and is a substrate for protein kinases A and C. Both alpha-adducin and beta-adducin show alternative splicing. Thus, there may be several different heterodimeric or homodimeric forms of adducin, each with a different functional specificity. It is thought to play a role in assembly of the spectrin-actin lattice that underlies the plasma membrane []. Missense mutations in both the alpha- and beta-adducin genes that alter amino acids that are normally phosphorylated have been associated with the regulation of blood pressure in the Milan hypertensive strain (MHS) of rats. Gamma adducin was isolated from human foetal brain []. It shows a high degree of similarity to the alpha and beta adducins.; GO: 0046872 metal ion binding; PDB: 2V9N_B 1GT7_B 2V9O_E 2V9M_B 2V9F_A 2UYV_A 1OJR_A 2V9G_C 2V29_B 2V9I_A ....
Probab=69.21 E-value=2.9 Score=34.65 Aligned_cols=38 Identities=18% Similarity=0.309 Sum_probs=31.2
Q ss_pred CCCceeeCCCcchHHHHHHHHHHHH-hcceEEEEecCCC
Q 022020 13 AALNCIDLSDPDIQKSAASLKQACM-DSGFFYVINHGIS 50 (304)
Q Consensus 13 ~~iPvIDl~~~~~~~~~~~l~~A~~-~~Gff~l~nhGi~ 50 (304)
..||+|++......++++.|.++++ +...+.+.|||+-
T Consensus 122 ~~v~~~~~~~~~~~~l~~~i~~~l~~~~~~vll~nHG~~ 160 (184)
T PF00596_consen 122 GEVPVVPYAPPGSEELAEAIAEALGEDRKAVLLRNHGVV 160 (184)
T ss_dssp SCEEEE-THSTTCHHHHHHHHHHHTCTSSEEEETTTEEE
T ss_pred ccceeeccccccchhhhhhhhhhhcCCceEEeecCCceE
Confidence 6899999976555667899999999 8899999999943
No 47
>PRK03634 rhamnulose-1-phosphate aldolase; Provisional
Probab=68.16 E-value=6 Score=35.28 Aligned_cols=50 Identities=12% Similarity=0.190 Sum_probs=37.1
Q ss_pred CCCceeeCCCcchHHHHHHHHHHHHhcceEEEEecCCC--hHHHHHHHHHHH
Q 022020 13 AALNCIDLSDPDIQKSAASLKQACMDSGFFYVINHGIS--KEFMDEVFAQSK 62 (304)
Q Consensus 13 ~~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~--~~~~~~~~~~~~ 62 (304)
..||++.+......++++.+.+++++...+.+.|||+- -+.+++++..+.
T Consensus 178 ~~i~vvpy~~pgs~eLa~~v~~~l~~~~avLL~nHGvv~~G~~l~eA~~~~e 229 (274)
T PRK03634 178 DGVGIVPWMVPGTDEIGQATAEKMQKHDLVLWPKHGVFGSGPTLDEAFGLID 229 (274)
T ss_pred CceeEecCCCCCCHHHHHHHHHHhccCCEEEEcCCCCeEecCCHHHHHHHHH
Confidence 45889988766677899999999999999999999965 233444444333
No 48
>PF07350 DUF1479: Protein of unknown function (DUF1479); InterPro: IPR010856 This family consists of several hypothetical Enterobacterial proteins, of around 420 residues in length. Members of this family are often known as YbiU. The function of this family is unknown.; PDB: 2CSG_A 2DBI_A 2DBN_A.
Probab=67.15 E-value=4.8 Score=37.93 Aligned_cols=55 Identities=13% Similarity=0.110 Sum_probs=37.0
Q ss_pred cCCCCceeeCCCcchHHHHHHHHHHHHhcceEEEEecCCChHHHHHHHHHHHHHhc
Q 022020 11 VSAALNCIDLSDPDIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFE 66 (304)
Q Consensus 11 ~~~~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~ 66 (304)
-+..||.||++......+.++..+.+++.|++.|.|. ||.+......+..++|..
T Consensus 46 G~~~IP~i~f~di~~~~~~~~~~~~ir~rG~~VIR~V-vp~~ea~~w~~e~~~Y~~ 100 (416)
T PF07350_consen 46 GSSIIPEIDFADIENGGVSEEFLAEIRRRGCVVIRGV-VPREEALAWKQELKEYLK 100 (416)
T ss_dssp T--SS-EEEHHHHHCT---HHHHHHHHHHSEEEECTS-S-HHHHHHHHHHHHHHHH
T ss_pred CCCCCceeeHHHHhCCCCCHHHHHHHHhcCEEEEeCC-CCHHHHHHHHHHHHHHHH
Confidence 3467999999755444466788899999999988643 788888888877777753
No 49
>TIGR02624 rhamnu_1P_ald rhamnulose-1-phosphate aldolase. Members of this family are the enzyme RhaD, rhamnulose-1-phosphate aldolase.
Probab=63.93 E-value=12 Score=33.42 Aligned_cols=38 Identities=13% Similarity=0.170 Sum_probs=32.8
Q ss_pred CCCceeeCCCcchHHHHHHHHHHHHhcceEEEEecCCC
Q 022020 13 AALNCIDLSDPDIQKSAASLKQACMDSGFFYVINHGIS 50 (304)
Q Consensus 13 ~~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~ 50 (304)
..||++.+..+...++++.+.+++++..-+.|.|||+-
T Consensus 176 ~~i~vvp~~~pGs~eLA~~v~~~l~~~~avLL~nHGvv 213 (270)
T TIGR02624 176 DGVGIIPWMVPGTNEIGEATAEKMKEHRLVLWPHHGIF 213 (270)
T ss_pred CccccccCcCCCCHHHHHHHHHHhccCCEEEEcCCCCe
Confidence 35889988777777899999999999999999999954
No 50
>TIGR01086 fucA L-fuculose phosphate aldolase. Members of this family are L-fuculose phosphate aldolase from various Proteobacteria, encoded in fucose utilization operons. Homologs in other bacteria given similar annotation may share extensive sequence similarity but are not experimenally characterized and are not found in apparent fucose utilization operons; we consider their annotation as L-fuculose phosphate aldolase to be tenuous. This model has been narrowed in scope from the previous version.
Probab=63.02 E-value=8.4 Score=32.93 Aligned_cols=37 Identities=16% Similarity=0.341 Sum_probs=30.8
Q ss_pred CCceeeCCCcchHHHHHHHHHHHHhcceEEEEecCCC
Q 022020 14 ALNCIDLSDPDIQKSAASLKQACMDSGFFYVINHGIS 50 (304)
Q Consensus 14 ~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~ 50 (304)
.||++.+......++++.+.+++.+...+.|.|||+-
T Consensus 121 ~i~~v~y~~~gs~~la~~v~~~~~~~~~vLL~nHG~~ 157 (214)
T TIGR01086 121 NIPCVPYATFGSTKLASEVVAGILKSKAILLLHHGLI 157 (214)
T ss_pred CccccCCCCCChHHHHHHHHHHhhhCCEEehhcCCCE
Confidence 4888888765566788899999999999999999954
No 51
>PRK06357 hypothetical protein; Provisional
Probab=62.97 E-value=10 Score=32.46 Aligned_cols=38 Identities=13% Similarity=0.277 Sum_probs=29.7
Q ss_pred CCCceeeCCCcchHHHHHHHHHHHHhc------ceEEEEecCCC
Q 022020 13 AALNCIDLSDPDIQKSAASLKQACMDS------GFFYVINHGIS 50 (304)
Q Consensus 13 ~~iPvIDl~~~~~~~~~~~l~~A~~~~------Gff~l~nhGi~ 50 (304)
..||++.+......++++.+.+++++. ..+.+.|||+-
T Consensus 129 g~i~~~p~~~~gs~ela~~v~~~l~~~~~~~~~~~vLl~nHGvv 172 (216)
T PRK06357 129 GKIPTLPFAPATSPELAEIVRKHLIELGDKAVPSAFLLNSHGIV 172 (216)
T ss_pred CCcceecccCCCcHHHHHHHHHHHhhcCcccCCCEEEECCCCCe
Confidence 357888886555678888888888864 58999999954
No 52
>PRK06557 L-ribulose-5-phosphate 4-epimerase; Validated
Probab=62.00 E-value=8 Score=33.18 Aligned_cols=49 Identities=8% Similarity=0.039 Sum_probs=35.7
Q ss_pred CCCceeeCCCcchHHHHHHHHHHH--HhcceEEEEecCCCh--HHHHHHHHHH
Q 022020 13 AALNCIDLSDPDIQKSAASLKQAC--MDSGFFYVINHGISK--EFMDEVFAQS 61 (304)
Q Consensus 13 ~~iPvIDl~~~~~~~~~~~l~~A~--~~~Gff~l~nhGi~~--~~~~~~~~~~ 61 (304)
..||++.+......++++.+.+++ .+...+.|.|||+-. +.+++++..+
T Consensus 129 ~~ip~~~y~~~g~~ela~~i~~~l~~~~~~~vll~nHG~~~~G~~~~eA~~~~ 181 (221)
T PRK06557 129 GPIPVGPFALIGDEAIGKGIVETLKGGRSPAVLMQNHGVFTIGKDAEDAVKAA 181 (221)
T ss_pred CCeeccCCcCCCcHHHHHHHHHHhCcCCCCEEEECCCCceEEcCCHHHHHHHH
Confidence 568998887656667889999999 788899999999652 2344444433
No 53
>TIGR03328 salvage_mtnB methylthioribulose-1-phosphate dehydratase. Members of this family are the methylthioribulose-1-phosphate dehydratase of the methionine salvage pathway. This pathway allows methylthioadenosine, left over from polyamine biosynthesis, to be recycled to methionine.
Probab=60.40 E-value=11 Score=31.50 Aligned_cols=36 Identities=19% Similarity=0.209 Sum_probs=28.9
Q ss_pred CCceeeCCCcchHHHHHHHHHHHH---hcceEEEEecCCC
Q 022020 14 ALNCIDLSDPDIQKSAASLKQACM---DSGFFYVINHGIS 50 (304)
Q Consensus 14 ~iPvIDl~~~~~~~~~~~l~~A~~---~~Gff~l~nhGi~ 50 (304)
.||+++. .....++++.+.++++ +...+.|.|||+=
T Consensus 126 ~vp~~~~-~~gs~ela~~~~~~l~~~~~~~avll~nHGv~ 164 (193)
T TIGR03328 126 TIPIFEN-TQDIARLADSVAPYLEAYPDVPGVLIRGHGLY 164 (193)
T ss_pred EEeeecC-CCChHHHHHHHHHHHhcCCCCCEEEEcCCcce
Confidence 5889975 4455678999999996 4789999999964
No 54
>cd00398 Aldolase_II Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). Class II enzymes are further divided into two sub-classes A and B. This family includes class II A aldolases and adducins which has not been ascribed any enzymatic function. Members of this class are primarily bacterial and eukaryotic in origin and include L-fuculose-1-phosphate, L-rhamnulose-1-phosphate aldolases and L-ribulose-5-phosphate 4-epimerases. They all share the ability to promote carbon-carbon bond cleavage and stabilize enolate intermediates using divalent cations.
Probab=58.05 E-value=8.3 Score=32.74 Aligned_cols=38 Identities=16% Similarity=0.243 Sum_probs=31.1
Q ss_pred CCCceeeCCCc--chHHHHHHHHHHHHhcceEEEEecCCC
Q 022020 13 AALNCIDLSDP--DIQKSAASLKQACMDSGFFYVINHGIS 50 (304)
Q Consensus 13 ~~iPvIDl~~~--~~~~~~~~l~~A~~~~Gff~l~nhGi~ 50 (304)
..||++++..+ ...++++.+.+++.+.-.+.+.|||+-
T Consensus 121 ~~ip~~~~~~~~~~~~~la~~~~~~l~~~~~vll~nHG~~ 160 (209)
T cd00398 121 GDIPCTPYMTPETGEDEIGTQRALGFPNSKAVLLRNHGLF 160 (209)
T ss_pred CCeeecCCcCCCccHHHHHHHHhcCCCcCCEEEEcCCCCe
Confidence 57999999765 556677888888888899999999954
No 55
>TIGR02409 carnitine_bodg gamma-butyrobetaine hydroxylase. Members of this protein family are gamma-butyrobetaine hydroxylase, both bacterial and eukarytotic. This enzyme catalyzes the last step in the conversion of lysine to carnitine. Carnitine can serve as a compatible solvent in bacteria and also participates in fatty acid metabolism.
Probab=55.78 E-value=16 Score=33.92 Aligned_cols=52 Identities=13% Similarity=-0.002 Sum_probs=37.7
Q ss_pred cCCCCceeeCCCc-chHHHHHHHHHHHHhcceEEEEecCCChHHHHHHHHHHHHHh
Q 022020 11 VSAALNCIDLSDP-DIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFF 65 (304)
Q Consensus 11 ~~~~iPvIDl~~~-~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF 65 (304)
..+++|.||++.. ...+...++.+++.++|++.+.+-.++.+. +.+.++.|-
T Consensus 106 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~G~v~~rg~~~~~~~---~~~~~~~~G 158 (366)
T TIGR02409 106 IELSLPKFDHEAVMKDDSVLLDWLSAVRDVGIAVLKGAPTKPGA---VEKLGKRIG 158 (366)
T ss_pred hcccCCceeHHHHhCCHHHHHHHHHHHHhccEEEEeCCCCCHHH---HHHHHHHhc
Confidence 4577899999642 234567889999999999999998886654 344555553
No 56
>PRK06754 mtnB methylthioribulose-1-phosphate dehydratase; Reviewed
Probab=52.60 E-value=16 Score=31.15 Aligned_cols=36 Identities=31% Similarity=0.431 Sum_probs=28.1
Q ss_pred CCceeeCCCcchHHHHHHHHHHHH-hcceEEEEecCCC
Q 022020 14 ALNCIDLSDPDIQKSAASLKQACM-DSGFFYVINHGIS 50 (304)
Q Consensus 14 ~iPvIDl~~~~~~~~~~~l~~A~~-~~Gff~l~nhGi~ 50 (304)
.||+++.-. ..+++++.+.++++ +...+.+.|||+=
T Consensus 137 ~vpv~~~~~-~~~eLa~~v~~~l~~~~~avLl~nHG~v 173 (208)
T PRK06754 137 HIPIIENHA-DIPTLAEEFAKHIQGDSGAVLIRNHGIT 173 (208)
T ss_pred EEEEecCCC-CHHHHHHHHHHHhccCCcEEEECCCceE
Confidence 488886322 34679999999998 8889999999954
No 57
>PRK07490 hypothetical protein; Provisional
Probab=51.36 E-value=16 Score=31.88 Aligned_cols=38 Identities=13% Similarity=0.093 Sum_probs=30.4
Q ss_pred CCCcee-eCCCcchHHHHHHHHHHHHhcceEEEEecCCC
Q 022020 13 AALNCI-DLSDPDIQKSAASLKQACMDSGFFYVINHGIS 50 (304)
Q Consensus 13 ~~iPvI-Dl~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~ 50 (304)
..||++ ++......++++.+.+++.+.-.+.|.|||+-
T Consensus 132 g~v~~~~~y~~~~~~ela~~v~~~l~~~~avlL~nHG~v 170 (245)
T PRK07490 132 NRVAVDTLYGGMALEEEGERLAGLLGDKRRLLMGNHGVL 170 (245)
T ss_pred CCeeeccCCCCcCcHHHHHHHHHHhCcCCEEEECCCCcE
Confidence 357775 56655566789999999999999999999954
No 58
>PRK09553 tauD taurine dioxygenase; Reviewed
Probab=49.63 E-value=29 Score=30.83 Aligned_cols=54 Identities=19% Similarity=0.296 Sum_probs=39.4
Q ss_pred cCCCCceeeCCCcchHHHHHHHHHHHHhcceEEEEecCCChHHHHHHHHHHHHHhcC
Q 022020 11 VSAALNCIDLSDPDIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFEL 67 (304)
Q Consensus 11 ~~~~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~l 67 (304)
.-++|.=+||+.....+..++|.+++.++|++.+.|..++. ++..+.++.|-.+
T Consensus 12 ~Gaev~g~dl~~~l~~~~~~~l~~~l~~~Gvlvfr~q~l~~---~~~~~~~~~~G~~ 65 (277)
T PRK09553 12 IGAQISGIDLTRPLSDNQFEQLYHALLRHQVLFFRDQPITP---QQQRDLAARFGDL 65 (277)
T ss_pred ceeEEeCcccCCcCCHHHHHHHHHHHHHCCEEEECCCCCCH---HHHHHHHHHhCCC
Confidence 34566667886543455788899999999999999998875 4455566666543
No 59
>PRK06661 hypothetical protein; Provisional
Probab=45.44 E-value=24 Score=30.59 Aligned_cols=37 Identities=14% Similarity=0.209 Sum_probs=28.4
Q ss_pred CCceeeCCCcch--HHHHHHHHHHHHhcceEEEEecCCC
Q 022020 14 ALNCIDLSDPDI--QKSAASLKQACMDSGFFYVINHGIS 50 (304)
Q Consensus 14 ~iPvIDl~~~~~--~~~~~~l~~A~~~~Gff~l~nhGi~ 50 (304)
.||..++..... .+.++.+.+++++...+.|.|||+-
T Consensus 123 ~i~~~~~~~~~~~~~~~~~~~a~~l~~~~avll~nHG~v 161 (231)
T PRK06661 123 RISYHNYNSLALDADKQSSRLVNDLKQNYVMLLRNHGAI 161 (231)
T ss_pred CceecCCCccccCchhHHHHHHHHhCCCCEEEECCCCCe
Confidence 467776653322 5678889999999999999999954
No 60
>COG2140 Thermophilic glucose-6-phosphate isomerase and related metalloenzymes [Carbohydrate transport and metabolism / General function prediction only]
Probab=44.37 E-value=60 Score=27.66 Aligned_cols=70 Identities=13% Similarity=0.004 Sum_probs=41.6
Q ss_pred CcceEEEEecCCCCCCCCcccccccccccCCCceeEEeeCCCCceeEEeCCCCCCCceEEccCCCCeEEEEcchhHHHHh
Q 022020 179 AMPYVSFNHYGVQDADPSKEYILGTPAHSDPSLITLLATDEVPGLQICRNIHANPRVWENVVPLKDAFIVNIGDMLERMS 258 (304)
Q Consensus 179 ~~~~lr~~~Yp~~~~~~~~~~~~~~~~HtD~~~lTll~~d~~~GLqv~~~~~~~~~~W~~v~~~~g~~iVn~Gd~l~~~T 258 (304)
..-.+|.+||.|...++. -.+.+. |--.++.++..+-..+..-+ .|.=+.||+.=|+.++|+||.==.+.
T Consensus 88 t~G~~~~~H~Hp~ade~E--~y~vi~-----G~g~m~v~~~~G~~~v~~~~---~Gd~iyVPp~~gH~t~N~Gd~pLvf~ 157 (209)
T COG2140 88 TPGAMRELHYHPNADEPE--IYYVLK-----GEGRMLVQKPEGEARVIAVR---AGDVIYVPPGYGHYTINTGDEPLVFL 157 (209)
T ss_pred cCCcccccccCCCCCccc--EEEEEe-----ccEEEEEEcCCCcEEEEEec---CCcEEEeCCCcceEeecCCCCCEEEE
Confidence 444678888887664421 112211 22233444444445555554 37789999999999999998543333
No 61
>PLN00052 prolyl 4-hydroxylase; Provisional
Probab=40.49 E-value=2e+02 Score=26.15 Aligned_cols=45 Identities=13% Similarity=0.121 Sum_probs=29.9
Q ss_pred EEccCCCCeEEEEcchhHHHHhCCc-ccccccccCC--CCceeEEEeeecCC
Q 022020 237 ENVVPLKDAFIVNIGDMLERMSNCV-FRSTMHRVLF--RQERYTIAYFVYPS 285 (304)
Q Consensus 237 ~~v~~~~g~~iVn~Gd~l~~~T~G~-~~s~~HRV~~--~~~R~S~~~f~~p~ 285 (304)
+.|.|..|..|+.-= ...||. =+.++|.+-| ...++++...++-.
T Consensus 206 l~VkPkkG~ALlF~n----l~~dG~~D~~SlHagcPVi~G~Kw~atkWi~~~ 253 (310)
T PLN00052 206 LAVKPVKGDAVLFFS----LHIDGVPDPLSLHGSCPVIEGEKWSAPKWIHIR 253 (310)
T ss_pred eEeccCcceEEEEec----cCCCCCCCcccccCCCeeecCeEEEEEEeeecc
Confidence 789999998777543 223453 2467888773 34788887777664
No 62
>PRK09220 methylthioribulose-1-phosphate dehydratase; Provisional
Probab=38.37 E-value=40 Score=28.50 Aligned_cols=48 Identities=21% Similarity=0.190 Sum_probs=31.2
Q ss_pred CCceeeCCCcchHHHHHHHHHHHHhcc---eEEEEecCCC--hHHHHHHHHHHH
Q 022020 14 ALNCIDLSDPDIQKSAASLKQACMDSG---FFYVINHGIS--KEFMDEVFAQSK 62 (304)
Q Consensus 14 ~iPvIDl~~~~~~~~~~~l~~A~~~~G---ff~l~nhGi~--~~~~~~~~~~~~ 62 (304)
.||++.- ....+++++.+.+++++.. .+.|.|||+- -+.+++++..+.
T Consensus 134 ~vp~~~~-~~~~~eLa~~v~~~l~~~~~~~avlL~nHGvi~~G~~~~eA~~~~e 186 (204)
T PRK09220 134 VVPIFDN-DQDIARLAARVAPYLDAQPLRYGYLIRGHGLYCWGRDMAEARRHLE 186 (204)
T ss_pred EEeeecC-CCCHHHHHHHHHHHHHhCCCCcEEEECCCceEEEcCCHHHHHHHHH
Confidence 4566543 2234678999999999864 8999999954 233444444443
No 63
>PF01471 PG_binding_1: Putative peptidoglycan binding domain; InterPro: IPR002477 This entry represents peptidoglycan binding domain (PGBD), as well as related domains that share the same structure. PGBD may have a general peptidoglycan binding function, has a core structure consisting of a closed, three-helical bundle with a left-handed twist. It is found at the N or C terminus of a variety of enzymes involved in bacterial cell wall degradation [, , ]. Examples are: Muramoyl-pentapeptide carboxypeptidase (3.4.17.8 from EC) N-acetylmuramoyl-L-alanine amidase cwlA precursor (cell wall hydrolase, autolysin, 3.5.1.28 from EC) Autolytic lysozyme (1,4-beta-N-acetylmuramidase, autolysin, 3.2.1.17 from EC) Membrane-bound lytic murein transglycosylase B Zinc-containing D-alanyl-D-alanine-cleaving carboxypeptidase, VanX []. Many of the proteins having this domain are as yet uncharacterised. However, some are known to belong to MEROPS peptidase family M15 (clan MD), subfamily M15A metallopeptidases. A number of the proteins belonging to subfamily M15A are non-peptidase homologues as they either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. Eukaryotic enzymes can contain structurally similar PGBD-like domains. Matrix metalloproteinases (MMP), which catalyse extracellular matrix degradation, have N-terminal domains that resemble PGBD. Examples are gelatinase A (MMP-2), which degrades type IV collagen [], stromelysin-1 (MMP-3), which plays a role in arthritis and tumour invasion [, ], and gelatinase B (MMP-9) secreted by neutrophils as part of the innate immune defence mechanism []. Several MMPs are implicated in cancer progression, since degradation of the extracellular matrix is an essential step in the cascade of metastasis [].; GO: 0008152 metabolic process; PDB: 1L6J_A 3BKH_A 3BKV_A 1GXD_A 1EAK_D 1CK7_A 1SLM_A 1LBU_A 1SU3_B.
Probab=37.39 E-value=29 Score=22.35 Aligned_cols=42 Identities=21% Similarity=0.167 Sum_probs=31.4
Q ss_pred HHHHHHHHHHhcceEEEEecCCChHHHHHHHHHHHHHhcCCH
Q 022020 28 SAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFELPF 69 (304)
Q Consensus 28 ~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~ 69 (304)
.+..|...+...||......|+-.....+++...+.++.|+.
T Consensus 4 ~v~~lq~~L~~~gy~~~~~~g~~~~~t~~Av~~fQ~~~gL~~ 45 (57)
T PF01471_consen 4 DVKALQQYLNRLGYYPGPVDGIFDPETREAVKAFQKANGLPV 45 (57)
T ss_dssp HHHHHHHHHHHTTTT-SSTTSBSHHHHHHHHHHHHHHTTS-S
T ss_pred HHHHHHHHHHHcCCCCCCCCCCcCHHHHHHHHHHHHHcCcCC
Confidence 567889999999998555556667777888888888887763
No 64
>cd00379 Ribosomal_L10_P0 Ribosomal protein L10 family; composed of the large subunit ribosomal protein called L10 in bacteria, P0 in eukaryotes, and L10e in archaea, as well as uncharacterized P0-like eukaryotic proteins. In all three kingdoms, L10 forms a tight complex with multiple copies of the small acidic protein L12(e). This complex forms a stalk structure on the large subunit of the ribosome. The N-terminal domain (NTD) of L10 interacts with L11 protein and forms the base of the L7/L12 stalk, while the extended C-terminal helix binds to two or three dimers of the NTD of L7/L12 (L7 and L12 are identical except for an acetylated N-terminus). The L7/L12 stalk is known to contain the binding site for elongation factors G and Tu (EF-G and EF-Tu, respectively); however, there is disagreement as to whether or not L10 is involved in forming the binding site. The stalk is believed to be associated with GTPase activities in protein synthesis. In a neuroblastoma cell line, L10 has been sho
Probab=35.47 E-value=1.3e+02 Score=23.85 Aligned_cols=39 Identities=13% Similarity=0.162 Sum_probs=32.0
Q ss_pred hHHHHHHHHHHHHhcceEEEEec-CCChHHHHHHHHHHHH
Q 022020 25 IQKSAASLKQACMDSGFFYVINH-GISKEFMDEVFAQSKK 63 (304)
Q Consensus 25 ~~~~~~~l~~A~~~~Gff~l~nh-Gi~~~~~~~~~~~~~~ 63 (304)
+...++++.+.++++.++++.++ |++...+.++....+.
T Consensus 3 K~~~v~~l~~~l~~~~~v~v~~~~~l~~~~~~~lR~~l~~ 42 (155)
T cd00379 3 KEELVEELKELLKKYKSVVVVDYRGLTVAQLTELRKELRE 42 (155)
T ss_pred hHHHHHHHHHHHHhCCEEEEEecCCCcHHHHHHHHHHHHH
Confidence 45688999999999999988886 8998888877776554
No 65
>PRK05834 hypothetical protein; Provisional
Probab=35.31 E-value=48 Score=27.88 Aligned_cols=37 Identities=14% Similarity=0.235 Sum_probs=25.7
Q ss_pred CCceeeCCCcch--HHHHHHHHHHHHhcc--eEEEEecCCC
Q 022020 14 ALNCIDLSDPDI--QKSAASLKQACMDSG--FFYVINHGIS 50 (304)
Q Consensus 14 ~iPvIDl~~~~~--~~~~~~l~~A~~~~G--ff~l~nhGi~ 50 (304)
.||++++..... +..++.+.+++++.. .+.|.|||+-
T Consensus 121 ~ipv~~~~~~~~~~~~la~~v~~~l~~~~~~avLL~nHGvv 161 (194)
T PRK05834 121 EISIYDPKDFDDWYERADTEILRYLQEKNKNFVVIKGYGVY 161 (194)
T ss_pred eeeecCccccchHHHhHHHHHHHHHhhcCCCEEEEcCCcce
Confidence 488886543322 235677888888755 9999999954
No 66
>COG3128 PiuC Uncharacterized iron-regulated protein [Function unknown]
Probab=35.19 E-value=2e+02 Score=24.20 Aligned_cols=35 Identities=17% Similarity=0.329 Sum_probs=22.5
Q ss_pred eEEccCCCCeEEEEcchhHHHHhCCcccccccccC--CCCceeEEEeee
Q 022020 236 WENVVPLKDAFIVNIGDMLERMSNCVFRSTMHRVL--FRQERYTIAYFV 282 (304)
Q Consensus 236 W~~v~~~~g~~iVn~Gd~l~~~T~G~~~s~~HRV~--~~~~R~S~~~f~ 282 (304)
=..|+.+.|.+|..-+ .++|+|. ....|+.+.|++
T Consensus 143 ~h~VklPAGdLVlypS------------tSlH~VtPVTRg~R~asffW~ 179 (229)
T COG3128 143 NHRVKLPAGDLVLYPS------------TSLHEVTPVTRGERFASFFWI 179 (229)
T ss_pred ceEEeccCCCEEEccc------------ccceeccccccCceEEEeeeh
Confidence 3455555577765433 3589999 456899876654
No 67
>PRK08193 araD L-ribulose-5-phosphate 4-epimerase; Reviewed
Probab=32.55 E-value=62 Score=27.96 Aligned_cols=38 Identities=11% Similarity=0.052 Sum_probs=27.0
Q ss_pred CCCceeeCCCc------chHHHHHHHHHHHHhc-------ceEEEEecCCC
Q 022020 13 AALNCIDLSDP------DIQKSAASLKQACMDS-------GFFYVINHGIS 50 (304)
Q Consensus 13 ~~iPvIDl~~~------~~~~~~~~l~~A~~~~-------Gff~l~nhGi~ 50 (304)
..||++++... ...+.++.+.+++++. ..+.+.|||+-
T Consensus 123 ~~ip~~~~~~~~~~~~~~~~~~~~~ia~~l~~~~~~~~~~~avLl~nHG~v 173 (231)
T PRK08193 123 GDIPCTRKMTDEEINGEYEWETGKVIVETFEKRGIDPAAVPGVLVHSHGPF 173 (231)
T ss_pred CCcceecCCCcccccccchhhHHHHHHHHHhhccCCcccCCEEEEcCCCce
Confidence 36899876322 2235778888888864 58999999954
No 68
>COG3695 Predicted methylated DNA-protein cysteine methyltransferase [DNA replication, recombination, and repair]
Probab=32.08 E-value=16 Score=27.15 Aligned_cols=29 Identities=21% Similarity=0.379 Sum_probs=19.1
Q ss_pred EcchhHHHHhCCcccccccccCCCCceeEE
Q 022020 249 NIGDMLERMSNCVFRSTMHRVLFRQERYTI 278 (304)
Q Consensus 249 n~Gd~l~~~T~G~~~s~~HRV~~~~~R~S~ 278 (304)
.+|-.|..++-|..- ++|||++..-|+|+
T Consensus 41 qVG~il~~l~~~s~l-PWhRVvns~G~isl 69 (103)
T COG3695 41 QVGRILKHLPEGSDL-PWHRVVNSDGRISL 69 (103)
T ss_pred HHHHHHhhCCCCCCC-ChhheecCCCcccC
Confidence 467777777777644 59999954445543
No 69
>TIGR02410 carnitine_TMLD trimethyllysine dioxygenase. Members of this family with known function act as trimethyllysine dioxygenase, an enzyme in the pathway for carnitine biosynthesis from lysine. This enzyme is homologous to gamma-butyrobetaine,2-oxoglutarate dioxygenase, which catalyzes the last step in carnitine biosynthesis. Members of this family appear to be eukaryotic only.
Probab=32.00 E-value=65 Score=29.88 Aligned_cols=50 Identities=14% Similarity=0.208 Sum_probs=34.8
Q ss_pred CCCceeeCCCc-c-hHHHHHHHHHHHHhcceEEEEecCCChHHHHHHHHHHHHHh
Q 022020 13 AALNCIDLSDP-D-IQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFF 65 (304)
Q Consensus 13 ~~iPvIDl~~~-~-~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF 65 (304)
..+|.+|++.- . ..+...++.+++.++|+..+.|-.++++.+. +.++.|.
T Consensus 99 ~~~~~~~~~~~~~~~d~~l~~~l~~l~~~G~v~~~g~~~~~~~~~---~~a~riG 150 (362)
T TIGR02410 99 LKDPSVHFKTTYDHTDSTLKSFSKNIYKYGFTFVDNVPVTPEATE---KLCERIS 150 (362)
T ss_pred ccCCceeHHHHhccCHHHHHHHHHHHHhhCEEEEcCCCCCHHHHH---HHHHHhc
Confidence 34688887421 1 1356788999999999999999888765544 4444553
No 70
>COG1402 Uncharacterized protein, putative amidase [General function prediction only]
Probab=31.35 E-value=1.5e+02 Score=26.09 Aligned_cols=43 Identities=19% Similarity=0.304 Sum_probs=28.0
Q ss_pred cchHHHHHHHHHHHHhcce--EEEEe-cCCChHHHHHHHHHHHHHh
Q 022020 23 PDIQKSAASLKQACMDSGF--FYVIN-HGISKEFMDEVFAQSKKFF 65 (304)
Q Consensus 23 ~~~~~~~~~l~~A~~~~Gf--f~l~n-hGi~~~~~~~~~~~~~~fF 65 (304)
..-......+.+++..+|| |+++| ||=-...+..+.+..+..+
T Consensus 86 ~t~~~~~~~~~~Sl~~~Gfrk~v~vNgHGGN~~~l~~v~~el~~~~ 131 (250)
T COG1402 86 ETLIALLVELVESLARHGFRKFVIVNGHGGNSAALEIVARELRAEL 131 (250)
T ss_pred HHHHHHHHHHHHHHHhcCccEEEEEecCCCcHHHHHHHHHHHHHhc
Confidence 3344577888899999999 55555 7755555555555554443
No 71
>PRK07044 aldolase II superfamily protein; Provisional
Probab=31.00 E-value=60 Score=28.45 Aligned_cols=37 Identities=19% Similarity=0.094 Sum_probs=28.1
Q ss_pred CCceeeCCCc-chHHHHHHHHHHHHhcceEEEEecCCC
Q 022020 14 ALNCIDLSDP-DIQKSAASLKQACMDSGFFYVINHGIS 50 (304)
Q Consensus 14 ~iPvIDl~~~-~~~~~~~~l~~A~~~~Gff~l~nhGi~ 50 (304)
.||++++... ...++++.+.+++++...+.|.|||+-
T Consensus 138 ~i~~~~y~~~~~~~e~~~~va~~l~~~~avLL~nHGvi 175 (252)
T PRK07044 138 RLAYHDYEGIALDLDEGERLVADLGDKPAMLLRNHGLL 175 (252)
T ss_pred CceeeCCCCCcCCHHHHHHHHHHhccCCEEEECCCCce
Confidence 5788877432 134567888889999999999999954
No 72
>PF11243 DUF3045: Protein of unknown function (DUF3045); InterPro: IPR021405 This entry is represented by Bacteriophage T4, Gp30.1; it is a family of uncharacterised viral proteins.
Probab=30.22 E-value=48 Score=23.43 Aligned_cols=21 Identities=24% Similarity=0.619 Sum_probs=17.3
Q ss_pred HHHHHHHHhcceEEEEecCCC
Q 022020 30 ASLKQACMDSGFFYVINHGIS 50 (304)
Q Consensus 30 ~~l~~A~~~~Gff~l~nhGi~ 50 (304)
+.|-..|.+.||.||+.|-+.
T Consensus 36 ~~if~eCVeqGFiYVs~~~~~ 56 (89)
T PF11243_consen 36 EPIFKECVEQGFIYVSKYWMD 56 (89)
T ss_pred cHHHHHHHhcceEEEEeeeec
Confidence 457788999999999888654
No 73
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]
Probab=30.05 E-value=1.3e+02 Score=26.64 Aligned_cols=44 Identities=20% Similarity=0.385 Sum_probs=34.4
Q ss_pred eeeCCCcchHHHHHHHHHHHHhcceEEEEec-CCChHHHHHHHHHHHH
Q 022020 17 CIDLSDPDIQKSAASLKQACMDSGFFYVINH-GISKEFMDEVFAQSKK 63 (304)
Q Consensus 17 vIDl~~~~~~~~~~~l~~A~~~~Gff~l~nh-Gi~~~~~~~~~~~~~~ 63 (304)
+|||+.+. ..-++.+-|.+.|.-.|++. |.+++.++.+.+.++.
T Consensus 73 ~IDFT~P~---~~~~~l~~~~~~~~~lVIGTTGf~~e~~~~l~~~a~~ 117 (266)
T COG0289 73 LIDFTTPE---ATLENLEFALEHGKPLVIGTTGFTEEQLEKLREAAEK 117 (266)
T ss_pred EEECCCch---hhHHHHHHHHHcCCCeEEECCCCCHHHHHHHHHHHhh
Confidence 57887653 45667788888998888886 9999998888887776
No 74
>PRK06486 hypothetical protein; Provisional
Probab=27.89 E-value=67 Score=28.41 Aligned_cols=37 Identities=14% Similarity=0.197 Sum_probs=27.9
Q ss_pred CCceee-CCC-cchHHHHHHHHHHHHhcceEEEEecCCC
Q 022020 14 ALNCID-LSD-PDIQKSAASLKQACMDSGFFYVINHGIS 50 (304)
Q Consensus 14 ~iPvID-l~~-~~~~~~~~~l~~A~~~~Gff~l~nhGi~ 50 (304)
.||++. +.. ....++++.+.+++++...+.|.|||+-
T Consensus 148 ~i~~~~~~~~~~~s~ela~~va~al~~~~avLL~nHG~v 186 (262)
T PRK06486 148 RTAVDEDYNGLALDAAEGDRIARAMGDADIVFLKNHGVM 186 (262)
T ss_pred CeeeccCCCCccCchhHHHHHHHHhCcCCEEEECCCCCe
Confidence 477764 421 2235688999999999999999999954
No 75
>PRK15331 chaperone protein SicA; Provisional
Probab=26.29 E-value=66 Score=26.36 Aligned_cols=43 Identities=23% Similarity=0.417 Sum_probs=34.7
Q ss_pred chHHHHHHHHHHHHhcceEEEEecCCChHHHHHHHHHHHHHhcC
Q 022020 24 DIQKSAASLKQACMDSGFFYVINHGISKEFMDEVFAQSKKFFEL 67 (304)
Q Consensus 24 ~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~l 67 (304)
+.+++++.|.+|+.+ |-=.-.-|||+++.++.++..+..||..
T Consensus 8 ~~~~~~~~i~~al~~-G~tlk~l~gis~~~le~iY~~Ay~~y~~ 50 (165)
T PRK15331 8 SEERVAEMIWDAVSE-GATLKDVHGIPQDMMDGLYAHAYEFYNQ 50 (165)
T ss_pred hHHHHHHHHHHHHHC-CCCHHHHhCCCHHHHHHHHHHHHHHHHC
Confidence 345678889999987 5444456999999999999999999964
No 76
>PF11043 DUF2856: Protein of unknown function (DUF2856); InterPro: IPR020500 This phage protein modulates the activity of the host recBCD nuclease and thus protects the linear double stranded DNA from exonuclease degradation [].
Probab=26.22 E-value=92 Score=22.05 Aligned_cols=24 Identities=25% Similarity=0.463 Sum_probs=20.4
Q ss_pred hHHHHHHHHHHHHHhcCCHHHHhh
Q 022020 51 KEFMDEVFAQSKKFFELPFDEKMK 74 (304)
Q Consensus 51 ~~~~~~~~~~~~~fF~lp~e~K~~ 74 (304)
.++++.+...-..|.+||.|.|..
T Consensus 20 sEVL~~~k~N~D~~~aL~~ETKaE 43 (97)
T PF11043_consen 20 SEVLDNIKNNYDAFMALPPETKAE 43 (97)
T ss_pred HHHHHHHHHHHHHHHcCChhhHHH
Confidence 577888888888999999998876
No 77
>cd05797 Ribosomal_L10 Ribosomal protein L10 family, L10 subfamily; composed of bacterial 50S ribosomal protein and eukaryotic mitochondrial 39S ribosomal protein, L10. L10 occupies the L7/L12 stalk of the ribosome. The N-terminal domain (NTD) of L10 interacts with L11 protein and forms the base of the L7/L12 stalk, while the extended C-terminal helix binds to two or three dimers of the NTD of L7/L12 (L7 and L12 are identical except for an acetylated N-terminus). The L7/L12 stalk is known to contain the binding site for elongation factors G and Tu (EF-G and EF-Tu, respectively); however, there is disagreement as to whether or not L10 is involved in forming the binding site. The stalk is believed to be associated with GTPase activities in protein synthesis. In a neuroblastoma cell line, L10 has been shown to interact with the SH3 domain of Src and to activate the binding of the Nck1 adaptor protein with skeletal proteins such as the Wiskott-Aldrich Syndrome Protein (WASP) and the WASP-in
Probab=26.04 E-value=2.2e+02 Score=22.73 Aligned_cols=40 Identities=15% Similarity=0.202 Sum_probs=32.4
Q ss_pred chHHHHHHHHHHHHhcceEEEEec-CCChHHHHHHHHHHHH
Q 022020 24 DIQKSAASLKQACMDSGFFYVINH-GISKEFMDEVFAQSKK 63 (304)
Q Consensus 24 ~~~~~~~~l~~A~~~~Gff~l~nh-Gi~~~~~~~~~~~~~~ 63 (304)
.....+++|.+.++++.++++.++ |++...+.++....+.
T Consensus 4 ~K~~~v~~l~~~l~~~~~v~v~~~~gl~~~~~~~lR~~lr~ 44 (157)
T cd05797 4 KKEEIVAELKEKLKEAKSVVVADYRGLTVAQLTELRKELRE 44 (157)
T ss_pred HHHHHHHHHHHHHHhCCEEEEEecCCCcHHHHHHHHHHHHH
Confidence 356788999999999998888886 8998888887776664
No 78
>PF03460 NIR_SIR_ferr: Nitrite/Sulfite reductase ferredoxin-like half domain; InterPro: IPR005117 Sulphite reductases (SiRs) and related nitrite reductases (NiRs) catalyse the six-electron reduction reactions of sulphite to sulphide, and nitrite to ammonia, respectively. The Escherichia coli SiR enzyme is a complex composed of two proteins, a flavoprotein alpha-component (SiR-FP) and a hemoprotein beta-component (SiR-HP), and has an alpha(8)beta(4) quaternary structure []. SiR-FP contains both FAD and FMN, while SiR-HP contains a Fe(4)S(4) cluster coupled to a sirohaem through a cysteine bridge. Electrons are transferred from NADPH to FAD, and on to FMN in SiR-FP, from which they are transferred to the metal centre of SiR-HP, where they reduce the siroheme-bound sulphite. SiR-HP has a two-fold symmetry, which generates a distinctive three-domain alpha/beta fold that controls assembly and reactivity []. This entry describes the ferrodoxin-like (alpha/beta sandwich) domain, which consists of a duplication containing two subdomains of this fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3B0H_A 4GEP_A 2GEP_A 2AOP_A 5AOP_A 6GEP_A 4AOP_A 1AOP_A 3AOP_A 8GEP_A ....
Probab=25.05 E-value=1.1e+02 Score=20.38 Aligned_cols=38 Identities=16% Similarity=0.302 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHhcc--eEEEEe------cCCChHHHHHHHHHHHH
Q 022020 26 QKSAASLKQACMDSG--FFYVIN------HGISKEFMDEVFAQSKK 63 (304)
Q Consensus 26 ~~~~~~l~~A~~~~G--ff~l~n------hGi~~~~~~~~~~~~~~ 63 (304)
.+..+.|.+.++++| .+.++. +||+.+.+..+++..++
T Consensus 23 ~~~l~~la~ia~~yg~~~irlT~~Q~l~l~~v~~~~~~~i~~~L~~ 68 (69)
T PF03460_consen 23 AEQLRALAEIAEKYGDGEIRLTTRQNLQLRGVPEENLPAIFEELKE 68 (69)
T ss_dssp HHHHHHHHHHHHHHSTSEEEEETTSCEEEEEEEGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCeEEECCCCeEEEeCCCHHHHHHHHHHHHc
Confidence 346677888888776 676654 56888888887776543
No 79
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=24.03 E-value=1e+02 Score=23.61 Aligned_cols=43 Identities=28% Similarity=0.413 Sum_probs=29.1
Q ss_pred eeeCCCcchHHHHHHHHHHHHhcceEEEEec-CCChHHHHHHHHHHH
Q 022020 17 CIDLSDPDIQKSAASLKQACMDSGFFYVINH-GISKEFMDEVFAQSK 62 (304)
Q Consensus 17 vIDl~~~~~~~~~~~l~~A~~~~Gff~l~nh-Gi~~~~~~~~~~~~~ 62 (304)
+||++.+ +.+..+.+.|.++|.=.|+.. |.+.+..+.+.++++
T Consensus 71 vIDfT~p---~~~~~~~~~~~~~g~~~ViGTTG~~~~~~~~l~~~a~ 114 (124)
T PF01113_consen 71 VIDFTNP---DAVYDNLEYALKHGVPLVIGTTGFSDEQIDELEELAK 114 (124)
T ss_dssp EEEES-H---HHHHHHHHHHHHHT-EEEEE-SSSHHHHHHHHHHHTT
T ss_pred EEEcCCh---HHhHHHHHHHHhCCCCEEEECCCCCHHHHHHHHHHhc
Confidence 5677743 355566677777899999975 888888877777554
No 80
>PRK00099 rplJ 50S ribosomal protein L10; Reviewed
Probab=23.21 E-value=2.7e+02 Score=22.63 Aligned_cols=40 Identities=15% Similarity=0.162 Sum_probs=32.1
Q ss_pred chHHHHHHHHHHHHhcceEEEEec-CCChHHHHHHHHHHHH
Q 022020 24 DIQKSAASLKQACMDSGFFYVINH-GISKEFMDEVFAQSKK 63 (304)
Q Consensus 24 ~~~~~~~~l~~A~~~~Gff~l~nh-Gi~~~~~~~~~~~~~~ 63 (304)
.....+++|.+.++++-++++.++ |++...+.++....+.
T Consensus 5 ~K~~~v~~l~~~l~~~~~v~v~~~~gl~~~~~~~lR~~lr~ 45 (172)
T PRK00099 5 EKKEIVAELAEKLKKAQSAVVADYRGLTVAQMTELRKKLRE 45 (172)
T ss_pred HHHHHHHHHHHHHHhCCEEEEEecCCCcHHHHHHHHHHHHH
Confidence 456788999999999988877776 8998888887776665
No 81
>PRK08324 short chain dehydrogenase; Validated
Probab=22.59 E-value=2.5e+02 Score=28.48 Aligned_cols=37 Identities=14% Similarity=0.142 Sum_probs=28.4
Q ss_pred CCCceeeCCCcchHHHHHHHHHHHHhcc---eEEEEecCCC
Q 022020 13 AALNCIDLSDPDIQKSAASLKQACMDSG---FFYVINHGIS 50 (304)
Q Consensus 13 ~~iPvIDl~~~~~~~~~~~l~~A~~~~G---ff~l~nhGi~ 50 (304)
..||++++..+. .++++++.++++..+ .+.|.|||+-
T Consensus 154 ~~v~~~py~~pg-~~l~~~~~~~~~~~~~~~~~lL~nHG~~ 193 (681)
T PRK08324 154 DRVGWVPYVRPG-FDLALAIAEAVRANPGAEGVVLGKHGLF 193 (681)
T ss_pred CceEEcCccCCC-hHHHHHHHHHHHhCCCCcEEEECCCCCe
Confidence 468999887655 456778888887665 8999999965
No 82
>TIGR00760 araD L-ribulose-5-phosphate 4-epimerase. The homolog to this family from Mycobacterium smegmatis is flanked by putative araB and araA genes, consistent with it also being araD.
Probab=22.25 E-value=1.1e+02 Score=26.30 Aligned_cols=38 Identities=11% Similarity=0.070 Sum_probs=25.8
Q ss_pred CCCceeeCC------CcchHHHHHHHHHHHHhc-------ceEEEEecCCC
Q 022020 13 AALNCIDLS------DPDIQKSAASLKQACMDS-------GFFYVINHGIS 50 (304)
Q Consensus 13 ~~iPvIDl~------~~~~~~~~~~l~~A~~~~-------Gff~l~nhGi~ 50 (304)
..||++++. .....+.++.|.+++.+. -.+.+.|||+-
T Consensus 124 g~ip~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~avlL~nHGvv 174 (231)
T TIGR00760 124 GTIPCTRPMTDEEINGEYELETGKVIVETFEKRGIDPAQIPGVLVHSHGPF 174 (231)
T ss_pred CceeeecCCCcccccccchHhHHHHHHHHHhhccCCcccCCEEEEcCCCce
Confidence 358887542 222235678888888775 57999999954
No 83
>PF12368 DUF3650: Protein of unknown function (DUF3650) ; InterPro: IPR022111 This domain family is found in bacteria, and is approximately 30 amino acids in length. The family is found in association with PF00581 from PFAM. There is a single completely conserved residue N that may be functionally important.
Probab=22.25 E-value=39 Score=18.89 Aligned_cols=17 Identities=41% Similarity=0.593 Sum_probs=12.4
Q ss_pred EEEEecCCChHHHHHHH
Q 022020 42 FYVINHGISKEFMDEVF 58 (304)
Q Consensus 42 f~l~nhGi~~~~~~~~~ 58 (304)
.||..||++.+.+.+-+
T Consensus 9 rYV~eh~ls~ee~~~RL 25 (28)
T PF12368_consen 9 RYVKEHGLSEEEVAERL 25 (28)
T ss_pred hhHHhcCCCHHHHHHHH
Confidence 47788999987766544
No 84
>PF01361 Tautomerase: Tautomerase enzyme; InterPro: IPR004370 4-Oxalocrotonate tautomerase (4-OT) catalyzes the isomerisation of beta,gamma-unsaturated enones to their alpha,beta-isomers. The enzyme is part of a plasmid-encoded pathway, which enables bacteria harbouring the plasmid to use various aromatic hydrocarbons as their sole sources of carbon and energy. The enzyme is a barrel-shaped hexamer, which can be viewed as a trimer of dimers. The hexamer contains a hydrophobic core formed by three beta-sheets and surrounded by three pairs of alpha-helices. Each 4-OT monomer of 62 amino acids has a relatively simple beta-alpha-beta fold as described by the structure of the enzyme from Pseudomonas putida []. The monomer begins with a conserved proline at the start of a beta-strand, followed by an alpha-helix and a 310 helix preceding a second parallel beta-strand, and ends with a beta-hairpin near the C terminus. The dimer results from antiparallel interactions between the beta-sheets and alpha-helices of the two monomers, forming a four-stranded beta-sheet with antiparallel alpha-helices on one side, creating two active sites, one at each end of the beta-sheet. Three dimers further associate to form a hexamer by the interactions of the strands of the C-terminal beta-hairpin loops with the edges of the four-stranded beta-sheets of neighbouring dimers, creating a series of cross-links that stabilise the hexamer Pro-1 of the mature protein functions as the general base while Arg-39 and an ordered water molecule each provide a hydrogen bond to the C-2 oxygen of substrate. Arg-39 plays an additional role in the binding of the C-1 carboxylate group. Arg-11 participates both in substrate binding and in catalysis. It interacts with the C-6 carboxylate group, thereby holding the substrate in place and drawing electron density to the C-5 position. The hydrophobic nature of the active site, which lowers the pKa of Pro-1 and provides a favourable environment for catalysis, is largely maintained by Phe-50. Because several Arg residues located near the active site are not conserved among all members of this family and because of the presence of fairly distantly related paralogs in Campylobacter jejuni, the family is regarded as not necessarily uniform in function.; GO: 0016853 isomerase activity, 0006725 cellular aromatic compound metabolic process; PDB: 4OTA_H 4OTC_G 4OTB_J 2FM7_A 1BJP_B 1S0Y_K 3EJ9_E 3EJ7_K 3EJ3_I 3MB2_A ....
Probab=21.89 E-value=1e+02 Score=20.03 Aligned_cols=26 Identities=12% Similarity=0.179 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCcccC
Q 022020 146 QEALNLGRKIGRIIALALDLDVDFFG 171 (304)
Q Consensus 146 ~~~~~la~~ll~~l~~~Lgl~~~~~~ 171 (304)
.+..+++..|.+++++.||.+++...
T Consensus 14 e~K~~l~~~it~~~~~~lg~~~~~i~ 39 (60)
T PF01361_consen 14 EQKRELAEAITDAVVEVLGIPPERIS 39 (60)
T ss_dssp HHHHHHHHHHHHHHHHHHTS-GGGEE
T ss_pred HHHHHHHHHHHHHHHHHhCcCCCeEE
Confidence 45678888999999999999877544
No 85
>COG3145 AlkB Alkylated DNA repair protein [DNA replication, recombination, and repair]
Probab=21.45 E-value=5e+02 Score=21.90 Aligned_cols=62 Identities=15% Similarity=-0.040 Sum_probs=36.0
Q ss_pred eEEEEecCCCCCCCCcccccccccccCCCc--ee---EEeeCCCCceeEEeCCCCCCCceEEccCCCCeEEEEcchh
Q 022020 182 YVSFNHYGVQDADPSKEYILGTPAHSDPSL--IT---LLATDEVPGLQICRNIHANPRVWENVVPLKDAFIVNIGDM 253 (304)
Q Consensus 182 ~lr~~~Yp~~~~~~~~~~~~~~~~HtD~~~--lT---ll~~d~~~GLqv~~~~~~~~~~W~~v~~~~g~~iVn~Gd~ 253 (304)
..-+|+|.|- -++++|.|-.- .+ +.++=+....-.....+ ..+.+..+...+|+++|.-|..
T Consensus 107 a~Lvn~Y~pG---------d~ig~HqD~~e~~~~~~v~slSLg~~~~F~~~~~~-r~~~~~~~~L~~Gdvvvm~G~~ 173 (194)
T COG3145 107 AVLVNRYRPG---------ASIGWHQDKDEEDDRPPVASLSLGAPCIFRLRGRR-RRGPGLRLRLEHGDVVVMGGPS 173 (194)
T ss_pred heeEEeccCC---------CccccccccccccCCCceEEEecCCCeEEEecccc-CCCCceeEEecCCCEEEecCCc
Confidence 3557888863 35777877531 11 11111222333332221 1478999999999999998854
No 86
>PRK02289 4-oxalocrotonate tautomerase; Provisional
Probab=20.87 E-value=1.3e+02 Score=19.67 Aligned_cols=26 Identities=8% Similarity=0.162 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCcccC
Q 022020 146 QEALNLGRKIGRIIALALDLDVDFFG 171 (304)
Q Consensus 146 ~~~~~la~~ll~~l~~~Lgl~~~~~~ 171 (304)
++-++|+..|.+++++.+|.|++.+.
T Consensus 15 EqK~~L~~~it~a~~~~~~~p~~~v~ 40 (60)
T PRK02289 15 EQKNALAREVTEVVSRIAKAPKEAIH 40 (60)
T ss_pred HHHHHHHHHHHHHHHHHhCcCcceEE
Confidence 45568888999999999999877644
No 87
>cd00491 4Oxalocrotonate_Tautomerase 4-Oxalocrotonate Tautomerase: Catalyzes the isomerization of unsaturated ketones. The structure is a homohexamer that is arranged as a trimer of dimers. The hexamer contains six active sites, each formed by residues from three monomers, two from one dimer and the third from a neighboring monomer. Each monomer is a beta-alpha-beta fold with two small beta strands at the C-terminus that fold back on themselves. A pair of monomers form a dimer with two-fold symmetry, consisting of a 4-stranded beta sheet with two helices on one side and two additional small beta strands at each end. The dimers are assembled around a 3-fold axis of rotation to form a hexamer, with the short beta strands from each dimer contacting the neighboring dimers.
Probab=20.35 E-value=1.4e+02 Score=18.90 Aligned_cols=27 Identities=7% Similarity=0.038 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCcccC
Q 022020 145 QQEALNLGRKIGRIIALALDLDVDFFG 171 (304)
Q Consensus 145 ~~~~~~la~~ll~~l~~~Lgl~~~~~~ 171 (304)
.++-++++..|.+++++.+|.+++.+.
T Consensus 13 ~eqk~~l~~~i~~~l~~~~g~~~~~v~ 39 (58)
T cd00491 13 DEQKRELIERVTEAVSEILGAPEATIV 39 (58)
T ss_pred HHHHHHHHHHHHHHHHHHhCcCcccEE
Confidence 345567888899999999999876543
No 88
>TIGR01573 cas2 CRISPR-associated endoribonuclease Cas2. This model describes most members of the family of Cas2, one of the first four protein families found to mark prokaryotic genomes that contain multiple CRISPR elements. It is an endoribonuclease, capable of cleaving single-stranded RNA. CRISPR is an acronym for Clustered Regularly Interspaced Short Palindromic Repeats. The cas genes are found near the repeats. A distinct branch of the Cas2 family shows a very low level of sequence identity and is modeled by TIGR01873 instead.
Probab=20.16 E-value=1e+02 Score=22.47 Aligned_cols=48 Identities=15% Similarity=0.242 Sum_probs=31.2
Q ss_pred eeCCCcchHHHHHHHHHHHHhcceEEEEec---C-CChHHHH-HHHHHHHHHh
Q 022020 18 IDLSDPDIQKSAASLKQACMDSGFFYVINH---G-ISKEFMD-EVFAQSKKFF 65 (304)
Q Consensus 18 IDl~~~~~~~~~~~l~~A~~~~Gff~l~nh---G-i~~~~~~-~~~~~~~~fF 65 (304)
-|++.........++.+.|+.+||+.+-.. | ++..... .+.+......
T Consensus 7 YDI~~~~~~k~r~kv~k~L~~~G~~rvQ~SVf~~~~~~~~~~~~l~~~l~~~i 59 (95)
T TIGR01573 7 YDIPTDGERKRRRKLRKLLEKYGLQRVQYSVFEGILEPNQLARKLIERLKRII 59 (95)
T ss_pred EECCCCchHHHHHHHHHHHHHcchhheeccEEEEEcCHHHHHHHHHHHHHHhC
Confidence 356543224568899999999998876553 2 5555555 5666666553
Done!