Query 022022
Match_columns 304
No_of_seqs 173 out of 577
Neff 6.8
Searched_HMMs 13730
Date Mon Mar 25 12:50:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022022.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/022022hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2qj2a2 g.14.1.1 (A:127-209) N 35.7 6.3 0.00046 27.0 1.3 18 268-285 48-65 (83)
2 d2hpqp_ g.14.1.1 (P:) Meizothr 30.8 9.2 0.00067 25.9 1.5 19 268-286 47-65 (79)
3 d5hpga_ g.14.1.1 (A:) Plasmino 29.5 9 0.00065 26.2 1.3 17 268-284 49-65 (84)
4 d1h8pa2 g.14.1.2 (A:68-109) PD 28.2 10 0.00074 22.8 1.2 26 270-300 15-40 (42)
5 d1nl1a1 g.14.1.1 (A:66-147) Pr 26.9 11 0.00077 25.7 1.3 21 268-288 47-67 (82)
6 d1l6ja3 g.14.1.2 (A:216-274) G 26.3 12 0.00085 24.2 1.3 26 271-300 29-54 (59)
7 d1ki0a1 g.14.1.1 (A:81-163) Pl 25.7 12 0.00084 25.6 1.3 19 268-286 50-68 (83)
8 d1e88a2 g.14.1.2 (A:102-160) F 24.8 14 0.001 23.8 1.5 27 270-300 28-54 (59)
9 d1pmla_ g.14.1.1 (A:) Plasmino 22.5 13 0.00095 25.4 1.0 17 267-284 51-67 (86)
10 d1eaka5 g.14.1.2 (A:336-393) G 22.4 15 0.0011 23.5 1.3 27 270-300 27-53 (58)
11 d1i71a_ g.14.1.1 (A:) Apolipop 21.7 15 0.0011 24.9 1.3 18 268-286 48-65 (83)
12 d1a0ha1 g.14.1.1 (A:164-270) M 21.2 16 0.0011 26.3 1.3 19 268-286 53-71 (109)
13 d2i9aa2 g.14.1.1 (A:50-132) Ur 21.0 14 0.001 25.0 0.9 17 267-284 49-65 (83)
14 d1ki0a2 g.14.1.1 (A:164-250) P 20.1 17 0.0013 24.9 1.3 18 268-286 49-66 (87)
No 1
>d2qj2a2 g.14.1.1 (A:127-209) NK1 fragment of hepatocyte growth factor {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.70 E-value=6.3 Score=27.00 Aligned_cols=18 Identities=33% Similarity=0.724 Sum_probs=12.3
Q ss_pred hhccCCCCCCCCcccccc
Q 022022 268 FNMCLGRSPDEMRPWCKA 285 (304)
Q Consensus 268 ~~fC~~~~~~~~~~WC~~ 285 (304)
+.||.....+..+|||--
T Consensus 48 hNyCRNP~~~~~~PWCy~ 65 (83)
T d2qj2a2 48 ENYCRNPRGEEGGPWCFT 65 (83)
T ss_dssp TTCCBCSSCCTTCSEEEB
T ss_pred cccccCCCCCCCCcceEe
Confidence 689975444446899954
No 2
>d2hpqp_ g.14.1.1 (P:) Meizothrombin {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.81 E-value=9.2 Score=25.89 Aligned_cols=19 Identities=32% Similarity=0.632 Sum_probs=12.4
Q ss_pred hhccCCCCCCCCccccccc
Q 022022 268 FNMCLGRSPDEMRPWCKAK 286 (304)
Q Consensus 268 ~~fC~~~~~~~~~~WC~~~ 286 (304)
+.||...+.+..+|||--.
T Consensus 47 ~NyCRNP~~~~~~PWCyt~ 65 (79)
T d2hpqp_ 47 ENFCRNPDGDEEGVWCYVA 65 (79)
T ss_dssp TTCCBCSSCCSSCCBCBCS
T ss_pred cccccCCCCCCCCcceEeC
Confidence 5799754444458999643
No 3
>d5hpga_ g.14.1.1 (A:) Plasminogen {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.49 E-value=9 Score=26.22 Aligned_cols=17 Identities=35% Similarity=0.735 Sum_probs=11.6
Q ss_pred hhccCCCCCCCCccccc
Q 022022 268 FNMCLGRSPDEMRPWCK 284 (304)
Q Consensus 268 ~~fC~~~~~~~~~~WC~ 284 (304)
+.||...+.+..+|||-
T Consensus 49 ~NyCRNP~~~~~~PWCy 65 (84)
T d5hpga_ 49 KNYCRNPDGDVGGPWCY 65 (84)
T ss_dssp TTCCBCTTCCTTCCEEE
T ss_pred cccccCCCCCcCCCCeE
Confidence 67997544344589995
No 4
>d1h8pa2 g.14.1.2 (A:68-109) PDC-109, collagen-binding type II domain {Cow (Bos taurus) [TaxId: 9913]}
Probab=28.18 E-value=10 Score=22.78 Aligned_cols=26 Identities=19% Similarity=0.509 Sum_probs=14.0
Q ss_pred ccCCCCCCCCcccccccCCcchHHHhhhhcc
Q 022022 270 MCLGRSPDEMRPWCKAKVPLLYNFIQSHYWF 300 (304)
Q Consensus 270 fC~~~~~~~~~~WC~~~~P~~Ys~vQ~~YWn 300 (304)
=|.....+ .+|||.-+ .+|=|++-|+
T Consensus 15 ~Ct~~~~~-~~~WCatt----~nyd~d~~W~ 40 (42)
T d1h8pa2 15 TCTKIGSM-WMSWCSLS----PNYDKDRAWK 40 (42)
T ss_dssp SCBCTTCS-SSCEEESS----SBHHHHCCEE
T ss_pred CccCCCCC-CCcCcCcc----cccccCCccc
Confidence 36543222 37999987 3343444453
No 5
>d1nl1a1 g.14.1.1 (A:66-147) Prothrombin {Cow (Bos taurus) [TaxId: 9913]}
Probab=26.94 E-value=11 Score=25.71 Aligned_cols=21 Identities=29% Similarity=0.697 Sum_probs=13.1
Q ss_pred hhccCCCCCCCCcccccccCC
Q 022022 268 FNMCLGRSPDEMRPWCKAKVP 288 (304)
Q Consensus 268 ~~fC~~~~~~~~~~WC~~~~P 288 (304)
+.||...+.+..+|||--+-|
T Consensus 47 ~NyCRNP~~~~~~PWCyv~~~ 67 (82)
T d1nl1a1 47 ENFCRNPDGSITGPWCYTTSP 67 (82)
T ss_dssp TTCCBCTTCCTTCSEEEBSST
T ss_pred cccccCCCCCCCCCCeEeCCC
Confidence 579975433445899964433
No 6
>d1l6ja3 g.14.1.2 (A:216-274) Gelatinase B (MMP-9) type II modules {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.28 E-value=12 Score=24.23 Aligned_cols=26 Identities=19% Similarity=0.517 Sum_probs=14.8
Q ss_pred cCCCCCCCCcccccccCCcchHHHhhhhcc
Q 022022 271 CLGRSPDEMRPWCKAKVPLLYNFIQSHYWF 300 (304)
Q Consensus 271 C~~~~~~~~~~WC~~~~P~~Ys~vQ~~YWn 300 (304)
|......+.+|||.-+ .+|=+++.|+
T Consensus 29 Ct~~~~~~~~~WCaTT----~nyd~d~~W~ 54 (59)
T d1l6ja3 29 CTTDGRSDGLPWCSTT----ANYDTDDRFG 54 (59)
T ss_dssp CBCTTCSSCCCEEESS----SBHHHHCCEE
T ss_pred CccCCCCCCcCEeCcc----cccccCCccc
Confidence 5543222348999987 3444455564
No 7
>d1ki0a1 g.14.1.1 (A:81-163) Plasminogen {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.71 E-value=12 Score=25.55 Aligned_cols=19 Identities=32% Similarity=0.740 Sum_probs=12.3
Q ss_pred hhccCCCCCCCCccccccc
Q 022022 268 FNMCLGRSPDEMRPWCKAK 286 (304)
Q Consensus 268 ~~fC~~~~~~~~~~WC~~~ 286 (304)
+.||...+.+..+|||--+
T Consensus 50 hNyCRNP~~~~~~PWCy~~ 68 (83)
T d1ki0a1 50 ENYCRNPDNDPQGPWCYTT 68 (83)
T ss_dssp TTCCBCTTCCTTCCEEEBS
T ss_pred cccccCCCCCCCCCceEec
Confidence 6799754434457999643
No 8
>d1e88a2 g.14.1.2 (A:102-160) Fibronectin {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.77 E-value=14 Score=23.83 Aligned_cols=27 Identities=15% Similarity=0.395 Sum_probs=15.1
Q ss_pred ccCCCCCCCCcccccccCCcchHHHhhhhcc
Q 022022 270 MCLGRSPDEMRPWCKAKVPLLYNFIQSHYWF 300 (304)
Q Consensus 270 fC~~~~~~~~~~WC~~~~P~~Ys~vQ~~YWn 300 (304)
=|......+.+|||.-+ .+|=+++-|+
T Consensus 28 ~Ct~~g~~~~~~WCaTT----~nyd~d~~W~ 54 (59)
T d1e88a2 28 DCTSEGRRDNMKWCGTT----QNYDADQKFG 54 (59)
T ss_dssp SCCCTTCCSSCCEEESS----TBHHHHCCEE
T ss_pred cccCCCCCCCcCCcCCc----cccccCCccc
Confidence 36543222348999987 3444455564
No 9
>d1pmla_ g.14.1.1 (A:) Plasminogen {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.47 E-value=13 Score=25.42 Aligned_cols=17 Identities=35% Similarity=0.974 Sum_probs=11.6
Q ss_pred HhhccCCCCCCCCccccc
Q 022022 267 YFNMCLGRSPDEMRPWCK 284 (304)
Q Consensus 267 y~~fC~~~~~~~~~~WC~ 284 (304)
-+.||...+.+ .+|||-
T Consensus 51 ~hNyCRNP~g~-~~PWCy 67 (86)
T d1pmla_ 51 KHNYCRNPDGD-AKPWCH 67 (86)
T ss_dssp SSCCCBCSSCC-SSCEEE
T ss_pred ccccccCCCCC-ccceEE
Confidence 36899764433 589994
No 10
>d1eaka5 g.14.1.2 (A:336-393) Gelatinase A (MMP-2) type II modules {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.41 E-value=15 Score=23.50 Aligned_cols=27 Identities=19% Similarity=0.567 Sum_probs=14.9
Q ss_pred ccCCCCCCCCcccccccCCcchHHHhhhhcc
Q 022022 270 MCLGRSPDEMRPWCKAKVPLLYNFIQSHYWF 300 (304)
Q Consensus 270 fC~~~~~~~~~~WC~~~~P~~Ys~vQ~~YWn 300 (304)
=|......+.+|||.-+ .+|=+++-|+
T Consensus 27 ~Ct~~~~~~~~~WCatt----~nyd~d~~W~ 53 (58)
T d1eaka5 27 SCTSAGRSDGKMWCATT----ANYDDDRKWG 53 (58)
T ss_dssp SCBCTTCSSSCCEEESS----SCHHHHCCEE
T ss_pred CCccCCCCCCccCcCcc----cccccCCccc
Confidence 36543222348999987 3344445564
No 11
>d1i71a_ g.14.1.1 (A:) Apolipoprotein A {Human (Homo sapiens), IV-7 variant [TaxId: 9606]}
Probab=21.67 E-value=15 Score=24.88 Aligned_cols=18 Identities=33% Similarity=0.931 Sum_probs=12.1
Q ss_pred hhccCCCCCCCCccccccc
Q 022022 268 FNMCLGRSPDEMRPWCKAK 286 (304)
Q Consensus 268 ~~fC~~~~~~~~~~WC~~~ 286 (304)
+.||...+.+ .+|||--+
T Consensus 48 hNyCRNP~~~-~~PWCyv~ 65 (83)
T d1i71a_ 48 RNYCRNPDAE-IRPWCYTM 65 (83)
T ss_dssp TTCCBCSSSC-SSCEEEBS
T ss_pred cccccCCCCC-CCceEEec
Confidence 6799764433 59999643
No 12
>d1a0ha1 g.14.1.1 (A:164-270) Meizothrombin {Cow (Bos taurus) [TaxId: 9913]}
Probab=21.18 E-value=16 Score=26.30 Aligned_cols=19 Identities=32% Similarity=0.669 Sum_probs=12.3
Q ss_pred hhccCCCCCCCCccccccc
Q 022022 268 FNMCLGRSPDEMRPWCKAK 286 (304)
Q Consensus 268 ~~fC~~~~~~~~~~WC~~~ 286 (304)
+.||...+.+..+|||--.
T Consensus 53 hNyCRNPdg~~~~PWCYv~ 71 (109)
T d1a0ha1 53 ENFCRNPDGDEEGAWCYVA 71 (109)
T ss_dssp TTSCBCTTCCTTCCEEECS
T ss_pred cccccCCCCCCCCceeEec
Confidence 6799754334457999543
No 13
>d2i9aa2 g.14.1.1 (A:50-132) Urokinase-type plasminogen activator {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.97 E-value=14 Score=25.04 Aligned_cols=17 Identities=35% Similarity=0.856 Sum_probs=11.4
Q ss_pred HhhccCCCCCCCCccccc
Q 022022 267 YFNMCLGRSPDEMRPWCK 284 (304)
Q Consensus 267 y~~fC~~~~~~~~~~WC~ 284 (304)
-+.||...+.+ .+|||-
T Consensus 49 ~hNyCRNP~~~-~~PWCy 65 (83)
T d2i9aa2 49 KHNYCRNPDNR-RRPWCY 65 (83)
T ss_dssp SSCCCBCTTCB-SSCEEE
T ss_pred CcccccCCCCC-cCceeE
Confidence 35799754433 489994
No 14
>d1ki0a2 g.14.1.1 (A:164-250) Plasminogen {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.14 E-value=17 Score=24.90 Aligned_cols=18 Identities=33% Similarity=0.918 Sum_probs=12.1
Q ss_pred hhccCCCCCCCCccccccc
Q 022022 268 FNMCLGRSPDEMRPWCKAK 286 (304)
Q Consensus 268 ~~fC~~~~~~~~~~WC~~~ 286 (304)
+.||...+.+ .+|||--.
T Consensus 49 hNyCRNP~~~-~~PWCy~~ 66 (87)
T d1ki0a2 49 KNYCRNPDRE-LRPWCFTT 66 (87)
T ss_dssp TTCCBCSSSC-SSCEEEBS
T ss_pred cccccCCCCC-cccceEec
Confidence 6799764433 59999643
Done!