Your job contains 1 sequence.
>022027
MEKKSVETEGDDDEPITEQELEIVEAIEAAYELSITRKRQLSPPVHNNHTHRPMSITSRR
LPSSLVASPSSPSFSLSHCQGANMRLKYPAMRFGGQILYSRTSTEVEMAAIELRRILEAN
KSEAGQVVVGFDIEWKPTFRKGVLPRKAAVMQICGDSNHCYVMQIIHSGIPPSLQLLLED
STILKVGVGIGSDAGKVYRDYNVSVKASEDLSYLAKHKIGGDSQKWGLASLTEMLVCKEL
KKPNRIRLGNWEADVLSKDQLLYAATDAFASWHLYQVLKSLPEPVKDATDQGNQRCSRLD
LHNC
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 022027
(304 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2119525 - symbol:WRNEXO "Werner syndrome-like ... 712 2.6e-70 1
ZFIN|ZDB-GENE-070702-2 - symbol:wrn "Werner syndrome" spe... 346 4.6e-30 1
UNIPROTKB|F1NAR0 - symbol:F1NAR0 "Uncharacterized protein... 332 1.3e-28 1
UNIPROTKB|E1BEE6 - symbol:WRN "Uncharacterized protein" s... 316 7.0e-27 1
UNIPROTKB|F1RX70 - symbol:WRN "Uncharacterized protein" s... 316 7.1e-27 1
UNIPROTKB|I3LC91 - symbol:WRN "Uncharacterized protein" s... 316 7.8e-27 1
UNIPROTKB|O93530 - symbol:wrn "Werner syndrome ATP-depend... 315 9.3e-27 1
UNIPROTKB|Q14191 - symbol:WRN "Werner syndrome ATP-depend... 303 1.8e-25 1
RGD|1564788 - symbol:Wrn "Werner syndrome, RecQ helicase-... 303 1.8e-25 1
UNIPROTKB|F1PZR2 - symbol:WRN "Uncharacterized protein" s... 292 2.4e-24 1
MGI|MGI:109635 - symbol:Wrn "Werner syndrome homolog (hum... 292 2.5e-24 1
UNIPROTKB|F1PZR3 - symbol:WRN "Uncharacterized protein" s... 292 2.8e-24 1
UNIPROTKB|F1PUF8 - symbol:WRN "Uncharacterized protein" s... 292 3.0e-24 1
TAIR|locus:504955532 - symbol:AT4G13885 species:3702 "Ara... 183 7.4e-20 2
UNIPROTKB|B3NZ68 - symbol:WRNexo "Werner Syndrome-like ex... 235 9.7e-20 1
FB|FBgn0038608 - symbol:WRNexo "WRN exonuclease" species:... 232 2.2e-19 1
UNIPROTKB|B4PLB3 - symbol:WRNexo "Werner Syndrome-like ex... 228 6.7e-19 1
UNIPROTKB|B4I298 - symbol:WRNexo "Werner Syndrome-like ex... 226 1.2e-18 1
UNIPROTKB|B4QUF6 - symbol:WRNexo "Werner Syndrome-like ex... 226 1.2e-18 1
UNIPROTKB|B4M401 - symbol:WRNexo "Werner Syndrome-like ex... 223 1.7e-18 1
UNIPROTKB|B4JF25 - symbol:WRNexo "Werner Syndrome-like ex... 221 2.8e-18 1
UNIPROTKB|B3LWP6 - symbol:WRNexo "Werner Syndrome-like ex... 222 3.6e-18 1
UNIPROTKB|B4K934 - symbol:WRNexo "Werner Syndrome-like ex... 216 1.0e-17 1
UNIPROTKB|F1S4B8 - symbol:EXD2 "Uncharacterized protein" ... 224 1.3e-17 1
UNIPROTKB|B4G5C9 - symbol:WRNexo "Werner Syndrome-like ex... 216 1.8e-17 1
UNIPROTKB|Q299L3 - symbol:WRNexo "Werner Syndrome-like ex... 216 1.8e-17 1
UNIPROTKB|B4N9D3 - symbol:WRNexo "Werner Syndrome-like ex... 213 4.0e-17 1
UNIPROTKB|E1BEQ0 - symbol:EXD2 "Uncharacterized protein" ... 208 1.4e-15 1
TIGR_CMR|SO_1153 - symbol:SO_1153 "exonuclease, putative"... 201 2.2e-15 1
UNIPROTKB|E1BXG2 - symbol:EXD2 "Uncharacterized protein" ... 206 4.5e-15 1
RGD|1311087 - symbol:Exd2 "exonuclease 3'-5' domain conta... 206 4.8e-15 1
UNIPROTKB|J9NWB3 - symbol:EXD2 "Uncharacterized protein" ... 200 8.2e-15 2
UNIPROTKB|E2QXX4 - symbol:EXD2 "Uncharacterized protein" ... 200 1.1e-14 2
FB|FBgn0037901 - symbol:CG6744 species:7227 "Drosophila m... 203 1.7e-14 1
UNIPROTKB|Q9NVH0 - symbol:EXD2 "Exonuclease 3'-5' domain-... 197 3.9e-14 2
ZFIN|ZDB-GENE-030131-6387 - symbol:exd2 "exonuclease 3'-5... 200 5.9e-14 1
DICTYBASE|DDB_G0278593 - symbol:exdl2B "3'-5' exonuclease... 191 1.4e-12 1
DICTYBASE|DDB_G0278079 - symbol:exdl2A "3'-5' exonuclease... 186 6.2e-12 1
MGI|MGI:1922485 - symbol:Exd2 "exonuclease 3'-5' domain c... 181 1.4e-11 1
UNIPROTKB|C9JLF4 - symbol:EXD2 "Exonuclease 3'-5' domain-... 147 4.9e-10 1
TAIR|locus:2053519 - symbol:AT2G36110 species:3702 "Arabi... 158 6.6e-10 1
GENEDB_PFALCIPARUM|PFA0290w - symbol:PFA0290w "DNA bindin... 134 3.8e-06 1
UNIPROTKB|Q8I282 - symbol:PFA_0290w "DNA binding protein,... 134 3.8e-06 1
DICTYBASE|DDB_G0285657 - symbol:DDB_G0285657 species:4468... 130 9.6e-06 1
TAIR|locus:2092482 - symbol:AT3G12410 species:3702 "Arabi... 119 4.5e-05 1
UNIPROTKB|Q8N9H8 - symbol:EXD3 "Probable exonuclease mut-... 91 0.00015 2
ZFIN|ZDB-GENE-091204-349 - symbol:exd3 "exonuclease 3'-5'... 90 0.00048 2
>TAIR|locus:2119525 [details] [associations]
symbol:WRNEXO "Werner syndrome-like exonuclease"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA;ISS] [GO:0005622 "intracellular"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0008408 "3'-5' exonuclease activity" evidence=IEA;ISS;IDA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 SMART:SM00474 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0003677
SUPFAM:SSF53098 GO:GO:0008408 EMBL:AL035528 EMBL:AL161537
EMBL:AJ404476 EMBL:AF531179 EMBL:BT010908 EMBL:AY530745
IPI:IPI00525961 IPI:IPI00547001 PIR:T05256 RefSeq:NP_193123.2
RefSeq:NP_974543.1 UniGene:At.2728 UniGene:At.33330
UniGene:At.45865 ProteinModelPortal:Q84LH3 SMR:Q84LH3 IntAct:Q84LH3
STRING:Q84LH3 EnsemblPlants:AT4G13870.2 GeneID:827021
KEGG:ath:AT4G13870 TAIR:At4g13870 eggNOG:NOG266861
HOGENOM:HOG000240617 InParanoid:Q84LH3 OMA:ICIDNDA PhylomeDB:Q84LH3
ProtClustDB:CLSN2690907 Genevestigator:Q84LH3 Uniprot:Q84LH3
Length = 288
Score = 712 (255.7 bits), Expect = 2.6e-70, P = 2.6e-70
Identities = 149/280 (53%), Positives = 184/280 (65%)
Query: 13 DEPITEQELEIVEAIEAAYELSITRKRQLS--PPVH-----NNHTHRPMSITXXXXXXXX 65
D+ TE+EL ++AIEA+Y S + S P V + H P I
Sbjct: 8 DDAFTEEELLAIDAIEASYNFSRSSSSSSSAAPTVQATTSVHGHEEDPNQIPNNIRRQLP 67
Query: 66 XXXXXXXXXXXXHCQGANMRLKYPAMRFGGQILYSRTSTEVEMAAIELRRILEANKSEAG 125
R +PAMRFGG+ILYS+T+TEV+ A++L ++L+ + E+G
Sbjct: 68 RSITSSTSYKRFPLSRCRAR-NFPAMRFGGRILYSKTATEVDKRAMQLIKVLDTKRDESG 126
Query: 126 QVVVGFDIEWKPTFRKGVLPRKAAVMQICGDSNHCYVMQIIHSGIPPSLQLLLEDSTILK 185
VG DIEW+P+FRKGVLP K A +QIC DSN+C VM I HSGIP SLQ L+EDST++K
Sbjct: 127 IAFVGLDIEWRPSFRKGVLPGKVATVQICVDSNYCDVMHIFHSGIPQSLQHLIEDSTLVK 186
Query: 186 VGVGIGSDAGKVYRDYNVSVKASEDLSYLAKHKIGGDSQKWGLASLTEMLVCKELKKPNR 245
VG+GI D+ K++ DY VS+K EDLS LA KIGGD +KWGLASLTE LVCKEL KPNR
Sbjct: 187 VGIGIDGDSVKLFHDYGVSIKDVEDLSDLANQKIGGD-KKWGLASLTETLVCKELLKPNR 245
Query: 246 IRLGNWEADVLSKDQLLYAATDAFASWHLYQVLKSLPEPV 285
IRLGNWE LSK QL YAATDA+ASWHLY+VLK LP+ V
Sbjct: 246 IRLGNWEFYPLSKQQLQYAATDAYASWHLYKVLKDLPDAV 285
>ZFIN|ZDB-GENE-070702-2 [details] [associations]
symbol:wrn "Werner syndrome" species:7955 "Danio
rerio" [GO:0043140 "ATP-dependent 3'-5' DNA helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0006139 "nucleobase-containing compound
metabolic process" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002121
InterPro:IPR002562 InterPro:IPR004589 InterPro:IPR010997
InterPro:IPR011545 InterPro:IPR012337 InterPro:IPR018982
Pfam:PF00270 Pfam:PF00271 Pfam:PF00570 Pfam:PF01612 Pfam:PF09382
PROSITE:PS50967 PROSITE:PS51194 SMART:SM00474 SMART:SM00490
SMART:SM00956 ZFIN:ZDB-GENE-070702-2 GO:GO:0005524 GO:GO:0006260
GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676
GO:GO:0005622 GO:GO:0006310 SUPFAM:SSF53098 GO:GO:0008408
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043140
GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80 SUPFAM:SSF47819
TIGRFAMs:TIGR00614 EMBL:BX537303 IPI:IPI00993584
ProteinModelPortal:E9QGF6 Ensembl:ENSDART00000136531 Uniprot:E9QGF6
Length = 1436
Score = 346 (126.9 bits), Expect = 4.6e-30, P = 4.6e-30
Identities = 75/194 (38%), Positives = 113/194 (58%)
Query: 89 PAMRFGGQILYSRTSTEVEMAAIELRRILEANKSEAGQVVVGFDIEWKPTFRKGVLPRKA 148
P + FGG ++YS+ + + +LR L + + VGFD+EW P+F KG +K
Sbjct: 33 PYLEFGGTVVYSQERHDCSFLSEDLRSALSSGSA------VGFDLEWPPSFTKGKT-KKV 85
Query: 149 AVMQICGDSNHCYVMQIIH-SGIPPSLQLLLEDSTILKVGVGIGSDAGKVYRDYNVSVKA 207
A++Q+C + CY+ I SG PP L++ LED I+KVGVGI D K+ DY++ +K
Sbjct: 86 AMVQLCASEDKCYLFHISSMSGFPPGLKMFLEDENIMKVGVGIEGDKWKLLSDYDIKLKN 145
Query: 208 SEDLSYLAKHKIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAATD 267
DLS LA K+ +KW L L + L+ K+L K +R +W+ L++DQ YAATD
Sbjct: 146 IVDLSDLANEKLRC-CEKWSLDGLVKHLLKKQLFKDKLVRCSHWDDFSLTEDQKRYAATD 204
Query: 268 AFASWHLYQVLKSL 281
A+A +YQ L+ +
Sbjct: 205 AYAGLLIYQKLQEM 218
>UNIPROTKB|F1NAR0 [details] [associations]
symbol:F1NAR0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0043140 "ATP-dependent 3'-5' DNA helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000287
"magnesium ion binding" evidence=IEA] [GO:0000403 "Y-form DNA
binding" evidence=IEA] [GO:0000405 "bubble DNA binding"
evidence=IEA] [GO:0000723 "telomere maintenance" evidence=IEA]
[GO:0000731 "DNA synthesis involved in DNA repair" evidence=IEA]
[GO:0001302 "replicative cell aging" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0006284 "base-excision
repair" evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] [GO:0009267 "cellular response to starvation"
evidence=IEA] [GO:0009378 "four-way junction helicase activity"
evidence=IEA] [GO:0010225 "response to UV-C" evidence=IEA]
[GO:0010259 "multicellular organismal aging" evidence=IEA]
[GO:0030145 "manganese ion binding" evidence=IEA] [GO:0031297
"replication fork processing" evidence=IEA] [GO:0032066 "nucleolus
to nucleoplasm transport" evidence=IEA] [GO:0032389 "MutLalpha
complex" evidence=IEA] [GO:0032403 "protein complex binding"
evidence=IEA] [GO:0040009 "regulation of growth rate" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0051345 "positive regulation of hydrolase activity"
evidence=IEA] [GO:0051880 "G-quadruplex DNA binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002121 InterPro:IPR002562
InterPro:IPR004589 InterPro:IPR010997 InterPro:IPR011545
InterPro:IPR012337 InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271
Pfam:PF00570 Pfam:PF01612 Pfam:PF09382 PROSITE:PS51194
SMART:SM00341 SMART:SM00474 SMART:SM00490 SMART:SM00956
GO:GO:0005524 GO:GO:0005813 GO:GO:0005654 GO:GO:0006979
GO:GO:0005730 GO:GO:0042981 GO:GO:0000287 GO:GO:0006284
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0001302 GO:GO:0030145
GO:GO:0006310 GO:GO:0009267 SUPFAM:SSF53098 GO:GO:0040009
GO:GO:0008408 GO:GO:0051345 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043140 GO:GO:0000723 GO:GO:0010225
GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80 SUPFAM:SSF47819
TIGRFAMs:TIGR00614 GO:GO:0000403 GO:GO:0000731 GO:GO:0000405
GO:GO:0009378 GO:GO:0051880 GO:GO:0031297 GO:GO:0032389
GO:GO:0032066 OMA:GIEGDQW EMBL:AADN02016143 IPI:IPI01017120
Ensembl:ENSGALT00000016720 Uniprot:F1NAR0
Length = 1367
Score = 332 (121.9 bits), Expect = 1.3e-28, P = 1.3e-28
Identities = 77/194 (39%), Positives = 114/194 (58%)
Query: 89 PAMRFGGQILYSRTSTEVEMAAIELRRILEANKSEAGQVVVGFDIEWKPTFRKGVLPRKA 148
P + F G I+YS +++ + + ++R+ L S+ VGFDIEW P++ KG + K
Sbjct: 10 PFLAFRGSIVYSYEASDCSLLSEDIRQTL----SDGA--AVGFDIEWPPSYTKGKMA-KI 62
Query: 149 AVMQICGDSNHCYVMQIIH-SGIPPSLQLLLEDSTILKVGVGIGSDAGKVYRDYNVSVKA 207
A++Q+C CY+ I SG P L+ LLED TI KVGVGI D K+ D+ V +K+
Sbjct: 63 ALIQLCVTEEKCYLFHISSMSGFPKGLKRLLEDETIKKVGVGIEGDHWKLMGDFEVKLKS 122
Query: 208 SEDLSYLAKHKIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAATD 267
+L+ +A K+ + W L L + L K+L K IR GNWE L ++Q LYAATD
Sbjct: 123 FVELADVANEKLKC-KEVWSLNGLVKHLFGKQLLKDKSIRCGNWEKFPLDEEQKLYAATD 181
Query: 268 AFASWHLYQVLKSL 281
A+A + +YQ LK++
Sbjct: 182 AYAGFIIYQKLKTM 195
>UNIPROTKB|E1BEE6 [details] [associations]
symbol:WRN "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051880 "G-quadruplex DNA binding" evidence=IEA]
[GO:0051345 "positive regulation of hydrolase activity"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0040009 "regulation of growth rate" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0032389
"MutLalpha complex" evidence=IEA] [GO:0032066 "nucleolus to
nucleoplasm transport" evidence=IEA] [GO:0031297 "replication fork
processing" evidence=IEA] [GO:0030145 "manganese ion binding"
evidence=IEA] [GO:0010259 "multicellular organismal aging"
evidence=IEA] [GO:0010225 "response to UV-C" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0009267 "cellular response to starvation" evidence=IEA]
[GO:0008408 "3'-5' exonuclease activity" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=IEA] [GO:0006284
"base-excision repair" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0001302 "replicative cell aging"
evidence=IEA] [GO:0000731 "DNA synthesis involved in DNA repair"
evidence=IEA] [GO:0000723 "telomere maintenance" evidence=IEA]
[GO:0000405 "bubble DNA binding" evidence=IEA] [GO:0000403 "Y-form
DNA binding" evidence=IEA] [GO:0000287 "magnesium ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] InterPro:IPR001650
InterPro:IPR002121 InterPro:IPR002562 InterPro:IPR004589
InterPro:IPR010997 InterPro:IPR011545 InterPro:IPR012337
InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271 Pfam:PF00570
Pfam:PF01612 Pfam:PF09382 PROSITE:PS50967 PROSITE:PS51194
SMART:SM00341 SMART:SM00474 SMART:SM00490 SMART:SM00956
GO:GO:0005524 GO:GO:0005813 GO:GO:0005654 GO:GO:0006979
GO:GO:0005730 GO:GO:0042981 GO:GO:0000287 GO:GO:0006284
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0001302 GO:GO:0030145
GO:GO:0006310 GO:GO:0009267 SUPFAM:SSF53098 GO:GO:0040009
GO:GO:0008408 GO:GO:0051345 GO:GO:0010259 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043140 GO:GO:0000723
GO:GO:0010225 GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80
SUPFAM:SSF47819 TIGRFAMs:TIGR00614 GO:GO:0000403 GO:GO:0000731
GO:GO:0000405 GO:GO:0009378 GO:GO:0051880 GO:GO:0031297
GO:GO:0032389 GO:GO:0032066 OMA:GIEGDQW EMBL:DAAA02060458
EMBL:DAAA02060459 EMBL:DAAA02060460 EMBL:DAAA02060461
EMBL:DAAA02060462 EMBL:DAAA02060463 EMBL:DAAA02060464
EMBL:DAAA02060465 EMBL:DAAA02060466 EMBL:DAAA02060467
EMBL:DAAA02060468 EMBL:DAAA02060469 EMBL:DAAA02060470
EMBL:DAAA02060471 EMBL:DAAA02060472 EMBL:DAAA02060473
EMBL:DAAA02060474 EMBL:DAAA02060475 EMBL:DAAA02060476
EMBL:DAAA02060477 EMBL:DAAA02060478 EMBL:DAAA02060479
EMBL:DAAA02060480 EMBL:DAAA02060481 EMBL:DAAA02060482
EMBL:DAAA02060483 EMBL:DAAA02060484 EMBL:DAAA02060485
EMBL:DAAA02060486 EMBL:DAAA02060487 EMBL:DAAA02060488
EMBL:DAAA02060489 EMBL:DAAA02060490 EMBL:DAAA02060491
EMBL:DAAA02060492 EMBL:DAAA02060493 EMBL:DAAA02060494
IPI:IPI00920936 Ensembl:ENSBTAT00000028778 Uniprot:E1BEE6
Length = 1404
Score = 316 (116.3 bits), Expect = 7.0e-27, P = 7.0e-27
Identities = 74/199 (37%), Positives = 116/199 (58%)
Query: 89 PAMRFGGQILYSRTSTEVEMAAIELRRILEANKSEAGQVVVGFDIEWKPTFRKGVLPRKA 148
P + F G +YS + + + + ++ L S+ VVGFDIEW P F+KG L R
Sbjct: 43 PFLEFTGSTVYSYEANDCSLLSEDISMSL----SDGD--VVGFDIEWPP-FKKGTLSR-V 94
Query: 149 AVMQICGDSNHCYVMQIIH-SGIPPSLQLLLEDSTILKVGVGIGSDAGKVYRDYNVSVKA 207
A++Q+C + CY+ I SG P L++LLE+ I K GVGI D K+ RD+++++K+
Sbjct: 95 ALIQLCVAESKCYLFHISSMSGFPQGLKMLLENEAIKKAGVGIEQDQWKLLRDFDINLKS 154
Query: 208 SEDLSYLAKHKIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAATD 267
+L+ +A K+ + W L L + L K+L K IR +W L++DQ +YAATD
Sbjct: 155 IVELTDVANEKLKC-IETWSLNGLVKYLFGKQLLKDRSIRCSDWSRFPLTEDQKVYAATD 213
Query: 268 AFASWHLYQVLKSLPEPVK 286
A+A + +YQ L +L +PV+
Sbjct: 214 AYAGFIIYQKLANLSDPVQ 232
>UNIPROTKB|F1RX70 [details] [associations]
symbol:WRN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
[GO:0008408 "3'-5' exonuclease activity" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002121
InterPro:IPR002562 InterPro:IPR004589 InterPro:IPR010997
InterPro:IPR011545 InterPro:IPR012337 InterPro:IPR018982
Pfam:PF00270 Pfam:PF00271 Pfam:PF00570 Pfam:PF01612 Pfam:PF09382
PROSITE:PS50967 PROSITE:PS51194 SMART:SM00341 SMART:SM00474
SMART:SM00490 SMART:SM00956 GO:GO:0005524 GO:GO:0006260
GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676
GO:GO:0005622 GO:GO:0006310 SUPFAM:SSF53098 GO:GO:0008408
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043140
GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80 SUPFAM:SSF47819
TIGRFAMs:TIGR00614 EMBL:FP102088 EMBL:FP565873
Ensembl:ENSSSCT00000017248 Uniprot:F1RX70
Length = 1409
Score = 316 (116.3 bits), Expect = 7.1e-27, P = 7.1e-27
Identities = 70/199 (35%), Positives = 114/199 (57%)
Query: 89 PAMRFGGQILYSRTSTEVEMAAIELRRILEANKSEAGQVVVGFDIEWKPTFRKGVLPRKA 148
P + F G I+YS +++ + ++ L + VVGFD+EW P + KG L R
Sbjct: 45 PFLEFTGSIVYSYEASDCSFLSEDISLSLSSGD------VVGFDMEWPPVYNKGKLGR-I 97
Query: 149 AVMQICGDSNHCYVMQIIHSGI-PPSLQLLLEDSTILKVGVGIGSDAGKVYRDYNVSVKA 207
A++Q+C + CY+ I + P L++LLE+ I K GVGI D K+ RD+++ +K+
Sbjct: 98 ALIQLCVSESKCYLFHISSMSVFPQGLKMLLENEAIKKAGVGIKGDQSKLLRDFDIKLKS 157
Query: 208 SEDLSYLAKHKIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAATD 267
+L+ +A K+ ++ W L L + L K+L K IR NW L++DQ LYAATD
Sbjct: 158 FVELTDVANEKLKC-AETWSLNGLVKHLFSKQLLKDKSIRCSNWSNFPLTEDQKLYAATD 216
Query: 268 AFASWHLYQVLKSLPEPVK 286
A+A + +YQ L++L + ++
Sbjct: 217 AYAGFIIYQKLENLGDAIQ 235
>UNIPROTKB|I3LC91 [details] [associations]
symbol:WRN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051880 "G-quadruplex DNA binding" evidence=IEA]
[GO:0051345 "positive regulation of hydrolase activity"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0040009 "regulation of growth rate" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0032389
"MutLalpha complex" evidence=IEA] [GO:0032066 "nucleolus to
nucleoplasm transport" evidence=IEA] [GO:0031297 "replication fork
processing" evidence=IEA] [GO:0030145 "manganese ion binding"
evidence=IEA] [GO:0010259 "multicellular organismal aging"
evidence=IEA] [GO:0010225 "response to UV-C" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0009267 "cellular response to starvation" evidence=IEA]
[GO:0008408 "3'-5' exonuclease activity" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=IEA] [GO:0006284
"base-excision repair" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0001302 "replicative cell aging"
evidence=IEA] [GO:0000731 "DNA synthesis involved in DNA repair"
evidence=IEA] [GO:0000723 "telomere maintenance" evidence=IEA]
[GO:0000405 "bubble DNA binding" evidence=IEA] [GO:0000403 "Y-form
DNA binding" evidence=IEA] [GO:0000287 "magnesium ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] InterPro:IPR001650
InterPro:IPR002121 InterPro:IPR002562 InterPro:IPR004589
InterPro:IPR010997 InterPro:IPR011545 InterPro:IPR012337
InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271 Pfam:PF00570
Pfam:PF01612 Pfam:PF09382 PROSITE:PS50967 PROSITE:PS51194
SMART:SM00341 SMART:SM00474 SMART:SM00490 SMART:SM00956
GO:GO:0005524 GO:GO:0005813 GO:GO:0005654 GO:GO:0006979
GO:GO:0005730 GO:GO:0042981 GO:GO:0000287 GO:GO:0006284
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0001302 GO:GO:0030145
GO:GO:0006310 GO:GO:0009267 SUPFAM:SSF53098 GO:GO:0040009
GO:GO:0008408 GO:GO:0051345 GO:GO:0010259 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043140 GO:GO:0000723
GO:GO:0010225 GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80
SUPFAM:SSF47819 TIGRFAMs:TIGR00614 GO:GO:0000403 GO:GO:0000731
GO:GO:0000405 GO:GO:0009378 GO:GO:0051880 GO:GO:0031297
GO:GO:0032389 GO:GO:0032066 OMA:GIEGDQW EMBL:FP102088 EMBL:FP565873
Ensembl:ENSSSCT00000022344 Uniprot:I3LC91
Length = 1507
Score = 316 (116.3 bits), Expect = 7.8e-27, P = 7.8e-27
Identities = 70/199 (35%), Positives = 114/199 (57%)
Query: 89 PAMRFGGQILYSRTSTEVEMAAIELRRILEANKSEAGQVVVGFDIEWKPTFRKGVLPRKA 148
P + F G I+YS +++ + ++ L + VVGFD+EW P + KG L R
Sbjct: 45 PFLEFTGSIVYSYEASDCSFLSEDISLSLSSGD------VVGFDMEWPPVYNKGKLGR-I 97
Query: 149 AVMQICGDSNHCYVMQIIHSGI-PPSLQLLLEDSTILKVGVGIGSDAGKVYRDYNVSVKA 207
A++Q+C + CY+ I + P L++LLE+ I K GVGI D K+ RD+++ +K+
Sbjct: 98 ALIQLCVSESKCYLFHISSMSVFPQGLKMLLENEAIKKAGVGIKGDQSKLLRDFDIKLKS 157
Query: 208 SEDLSYLAKHKIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAATD 267
+L+ +A K+ ++ W L L + L K+L K IR NW L++DQ LYAATD
Sbjct: 158 FVELTDVANEKLKC-AETWSLNGLVKHLFSKQLLKDKSIRCSNWSNFPLTEDQKLYAATD 216
Query: 268 AFASWHLYQVLKSLPEPVK 286
A+A + +YQ L++L + ++
Sbjct: 217 AYAGFIIYQKLENLGDAIQ 235
>UNIPROTKB|O93530 [details] [associations]
symbol:wrn "Werner syndrome ATP-dependent helicase homolog"
species:8355 "Xenopus laevis" [GO:0000287 "magnesium ion binding"
evidence=ISS] [GO:0006259 "DNA metabolic process" evidence=ISS]
[GO:0008408 "3'-5' exonuclease activity" evidence=ISS] [GO:0030145
"manganese ion binding" evidence=ISS] InterPro:IPR001650
InterPro:IPR002121 InterPro:IPR002562 InterPro:IPR004589
InterPro:IPR010997 InterPro:IPR011545 InterPro:IPR012337
InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271 Pfam:PF00570
Pfam:PF01612 Pfam:PF09382 PROSITE:PS00690 PROSITE:PS50967
PROSITE:PS51194 SMART:SM00341 SMART:SM00474 SMART:SM00490
SMART:SM00956 GO:GO:0005524 GO:GO:0005634 GO:GO:0000287
GO:GO:0003677 GO:GO:0006260 GO:GO:0006259 GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0030145 GO:GO:0006310
SUPFAM:SSF53098 GO:GO:0008408 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043140 Gene3D:1.10.150.80 SUPFAM:SSF47819
TIGRFAMs:TIGR00614 KO:K10900 CTD:7486 HOVERGEN:HBG000325
EMBL:AF067418 PIR:T14895 RefSeq:NP_001081838.1 UniGene:Xl.404
ProteinModelPortal:O93530 SMR:O93530 GeneID:398079 KEGG:xla:398079
Xenbase:XB-GENE-992879 Uniprot:O93530
Length = 1436
Score = 315 (115.9 bits), Expect = 9.3e-27, P = 9.3e-27
Identities = 77/218 (35%), Positives = 119/218 (54%)
Query: 89 PAMRFGGQILYSRTSTEVEMAAIELRR-ILEANKSEAGQVVVGFDIEWKPTFRKGVLPRK 147
P M+F G I+YS S + + + ++R +LE + V+GFDIEW P + KG K
Sbjct: 39 PFMKFNGSIVYSYESNDCSLLSEDIRSSLLEED-------VLGFDIEWPPVYTKGKTG-K 90
Query: 148 AAVMQICGDSNHCYVMQIIH-SGIPPSLQLLLEDSTILKVGVGIGSDAGKVYRDYNVSVK 206
A++Q+C CY+ I +G P L+ LLED ++ KVGVGI D K+ DY + +K
Sbjct: 91 VALIQVCVSEKKCYLFHISPMAGFPKGLKRLLEDESVRKVGVGIEGDQWKLMSDYELKLK 150
Query: 207 ASEDLSYLAKHKIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAAT 266
+LS +A K+ +KW L + L ++L K R NW+ +L++DQ LYAAT
Sbjct: 151 GFIELSEMANQKLRC-KEKWTFNGLIKHLFKEQLYKRKSYRCSNWDIFLLTEDQKLYAAT 209
Query: 267 DAFASWHLYQVLKSLPEPVKDATDQGNQRCSRLDLHNC 304
DA+A +Y+ L+ + DA + + R R + +C
Sbjct: 210 DAYAGLLIYKKLEGM-----DAHESDSFRVGREGVADC 242
>UNIPROTKB|Q14191 [details] [associations]
symbol:WRN "Werner syndrome ATP-dependent helicase"
species:9606 "Homo sapiens" [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0043140 "ATP-dependent 3'-5' DNA helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001302 "replicative cell aging" evidence=IEA] [GO:0040009
"regulation of growth rate" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0031297 "replication fork processing" evidence=IMP;IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0000723 "telomere
maintenance" evidence=IMP] [GO:0007569 "cell aging" evidence=IMP]
[GO:0010259 "multicellular organismal aging" evidence=IMP]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IDA]
[GO:0007568 "aging" evidence=NAS] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003678 "DNA helicase activity" evidence=IDA;IMP]
[GO:0004386 "helicase activity" evidence=IDA] [GO:0008408 "3'-5'
exonuclease activity" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0032403 "protein
complex binding" evidence=IDA] [GO:0000731 "DNA synthesis involved
in DNA repair" evidence=IDA] [GO:0010225 "response to UV-C"
evidence=IDA] [GO:0006974 "response to DNA damage stimulus"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IMP]
[GO:0032389 "MutLalpha complex" evidence=IDA] [GO:0000403 "Y-form
DNA binding" evidence=IDA] [GO:0043138 "3'-5' DNA helicase
activity" evidence=IDA] [GO:0000405 "bubble DNA binding"
evidence=IDA] [GO:0009378 "four-way junction helicase activity"
evidence=IDA] [GO:0051880 "G-quadruplex DNA binding" evidence=IDA]
[GO:0006284 "base-excision repair" evidence=IDA] [GO:0051345
"positive regulation of hydrolase activity" evidence=IDA]
[GO:0006979 "response to oxidative stress" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0000287 "magnesium ion
binding" evidence=IDA] [GO:0030145 "manganese ion binding"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=IMP] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0071480 "cellular response to gamma
radiation" evidence=IDA] [GO:0004527 "exonuclease activity"
evidence=IDA] [GO:0009267 "cellular response to starvation"
evidence=IDA] [GO:0032066 "nucleolus to nucleoplasm transport"
evidence=IDA] [GO:0042981 "regulation of apoptotic process"
evidence=IGI] [GO:0005634 "nucleus" evidence=IDA] [GO:0006200 "ATP
catabolic process" evidence=IDA] [GO:0032508 "DNA duplex unwinding"
evidence=IMP;IDA] InterPro:IPR001650 InterPro:IPR002121
InterPro:IPR002562 InterPro:IPR004589 InterPro:IPR010997
InterPro:IPR011545 InterPro:IPR012337 InterPro:IPR018982
Pfam:PF00270 Pfam:PF00271 Pfam:PF00570 Pfam:PF01612 Pfam:PF09382
PROSITE:PS00690 PROSITE:PS50967 PROSITE:PS51194 SMART:SM00341
SMART:SM00474 SMART:SM00490 SMART:SM00956 GO:GO:0005524
GO:GO:0005813 Pathway_Interaction_DB:telomerasepathway
GO:GO:0042803 GO:GO:0005654 GO:GO:0006979 GO:GO:0005730
GO:GO:0042981 GO:GO:0032403 GO:GO:0000287 GO:GO:0006284
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0001302 GO:GO:0030145
GO:GO:0006310 GO:GO:0009267 GO:GO:0004003 SUPFAM:SSF53098
MIM:114500 GO:GO:0040009 GO:GO:0008408 GO:GO:0051345 GO:GO:0010259
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043140
GO:GO:0000723 GO:GO:0010225 GO:GO:0007569 eggNOG:COG0514
Gene3D:1.10.150.80 SUPFAM:SSF47819 TIGRFAMs:TIGR00614 GO:GO:0000403
GO:GO:0000731 GO:GO:0000405 GO:GO:0009378 GO:GO:0051880
GO:GO:0031297 GO:GO:0043138 GO:GO:0032066 KO:K10900 EMBL:L76937
EMBL:AY818673 EMBL:AF091214 EMBL:AF181897 EMBL:AF181896
EMBL:AY442327 EMBL:AC084736 IPI:IPI00029107 RefSeq:NP_000544.2
UniGene:Hs.632050 PDB:2AXL PDB:2DGZ PDB:2E1E PDB:2E1F PDB:2FBT
PDB:2FBV PDB:2FBX PDB:2FBY PDB:2FC0 PDB:3AAF PDBsum:2AXL
PDBsum:2DGZ PDBsum:2E1E PDBsum:2E1F PDBsum:2FBT PDBsum:2FBV
PDBsum:2FBX PDBsum:2FBY PDBsum:2FC0 PDBsum:3AAF DisProt:DP00443
ProteinModelPortal:Q14191 SMR:Q14191 DIP:DIP-31380N IntAct:Q14191
MINT:MINT-95856 STRING:Q14191 PhosphoSite:Q14191 DMDM:6136393
PaxDb:Q14191 PRIDE:Q14191 Ensembl:ENST00000298139 GeneID:7486
KEGG:hsa:7486 UCSC:uc003xio.4 CTD:7486 GeneCards:GC08P030948
H-InvDB:HIX0007441 HGNC:HGNC:12791 HPA:HPA028661 MIM:277700
MIM:604611 neXtProt:NX_Q14191 Orphanet:902 PharmGKB:PA367
HOGENOM:HOG000146447 HOVERGEN:HBG000325 InParanoid:Q14191
OMA:GIEGDQW OrthoDB:EOG4DNF3J PhylomeDB:Q14191
EvolutionaryTrace:Q14191 GenomeRNAi:7486 NextBio:29326 Bgee:Q14191
CleanEx:HS_WRN Genevestigator:Q14191 GermOnline:ENSG00000165392
Uniprot:Q14191
Length = 1432
Score = 303 (111.7 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 69/199 (34%), Positives = 115/199 (57%)
Query: 89 PAMRFGGQILYSRTSTEVEMAAIELRRILEANKSEAGQVVVGFDIEWKPTFRKGVLPRKA 148
P + F G I+YS +++ + ++ L S+ VVGFD+EW P + +G L K
Sbjct: 45 PFLEFTGSIVYSYDASDCSFLSEDISMSL----SDGD--VVGFDMEWPPLYNRGKLG-KV 97
Query: 149 AVMQICGDSNHCYVMQIIHSGI-PPSLQLLLEDSTILKVGVGIGSDAGKVYRDYNVSVKA 207
A++Q+C + CY+ + + P L++LLE+ + K GVGI D K+ RD+++ +K
Sbjct: 98 ALIQLCVSESKCYLFHVSSMSVFPQGLKMLLENKAVKKAGVGIEGDQWKLLRDFDIKLKN 157
Query: 208 SEDLSYLAKHKIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAATD 267
+L+ +A K+ ++ W L SL + L+ K+L K IR NW L++DQ LYAATD
Sbjct: 158 FVELTDVANKKLKC-TETWSLNSLVKHLLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATD 216
Query: 268 AFASWHLYQVLKSLPEPVK 286
A+A + +Y+ L+ L + V+
Sbjct: 217 AYAGFIIYRNLEILDDTVQ 235
>RGD|1564788 [details] [associations]
symbol:Wrn "Werner syndrome, RecQ helicase-like" species:10116
"Rattus norvegicus" [GO:0000287 "magnesium ion binding"
evidence=ISO] [GO:0000403 "Y-form DNA binding" evidence=ISO]
[GO:0000405 "bubble DNA binding" evidence=ISO] [GO:0000723
"telomere maintenance" evidence=ISO] [GO:0000731 "DNA synthesis
involved in DNA repair" evidence=ISO] [GO:0001302 "replicative cell
aging" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003678
"DNA helicase activity" evidence=ISO] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=ISO] [GO:0004386 "helicase
activity" evidence=ISO] [GO:0004527 "exonuclease activity"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006259 "DNA metabolic
process" evidence=ISO] [GO:0006260 "DNA replication"
evidence=IEA;ISO] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=ISO] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0006979 "response to oxidative stress"
evidence=ISO] [GO:0007569 "cell aging" evidence=ISO] [GO:0008408
"3'-5' exonuclease activity" evidence=IEA;ISO] [GO:0009267
"cellular response to starvation" evidence=ISO] [GO:0009378
"four-way junction helicase activity" evidence=ISO] [GO:0010225
"response to UV-C" evidence=ISO] [GO:0010259 "multicellular
organismal aging" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0030145 "manganese ion binding" evidence=ISO]
[GO:0031297 "replication fork processing" evidence=ISO] [GO:0032066
"nucleolus to nucleoplasm transport" evidence=ISO] [GO:0032403
"protein complex binding" evidence=ISO] [GO:0032508 "DNA duplex
unwinding" evidence=ISO] [GO:0040009 "regulation of growth rate"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0042981 "regulation of apoptotic process"
evidence=ISO] [GO:0043138 "3'-5' DNA helicase activity"
evidence=ISO] [GO:0043140 "ATP-dependent 3'-5' DNA helicase
activity" evidence=IEA] [GO:0051345 "positive regulation of
hydrolase activity" evidence=ISO] [GO:0051880 "G-quadruplex DNA
binding" evidence=ISO] [GO:0071480 "cellular response to gamma
radiation" evidence=ISO] [GO:0032389 "MutLalpha complex"
evidence=ISO] InterPro:IPR001650 InterPro:IPR002121
InterPro:IPR002562 InterPro:IPR004589 InterPro:IPR010997
InterPro:IPR011545 InterPro:IPR012337 InterPro:IPR018982
Pfam:PF00270 Pfam:PF00271 Pfam:PF00570 Pfam:PF01612 Pfam:PF09382
PROSITE:PS50967 PROSITE:PS51194 SMART:SM00341 SMART:SM00474
SMART:SM00490 SMART:SM00956 RGD:1564788 GO:GO:0005524 GO:GO:0005813
GO:GO:0005654 GO:GO:0006979 GO:GO:0005730 GO:GO:0042981
GO:GO:0000287 GO:GO:0006284 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0001302 GO:GO:0030145 GO:GO:0006310 GO:GO:0009267
SUPFAM:SSF53098 GO:GO:0040009 GO:GO:0008408 GO:GO:0051345
GO:GO:0010259 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043140 GO:GO:0000723 GO:GO:0010225
GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80 SUPFAM:SSF47819
TIGRFAMs:TIGR00614 GO:GO:0000403 GO:GO:0000731 GO:GO:0000405
GO:GO:0009378 GO:GO:0051880 GO:GO:0031297 GO:GO:0032389
GO:GO:0032066 IPI:IPI00960063 ProteinModelPortal:F1LTH9
Ensembl:ENSRNOT00000058805 Uniprot:F1LTH9
Length = 1448
Score = 303 (111.7 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 70/199 (35%), Positives = 116/199 (58%)
Query: 89 PAMRFGGQILYSRTSTEVEMAAIELRRILEANKSEAGQVVVGFDIEWKPTFRKGVLPRKA 148
P + F G ++YS +++ + ++ L S+ VVGFD+EW P +++G R
Sbjct: 46 PFLEFTGSVVYSYEASDCSFLSEDISMHL----SDGD--VVGFDMEWPPIYKQGKRSR-V 98
Query: 149 AVMQICGDSNHCYVMQIIHSGI-PPSLQLLLEDSTILKVGVGIGSDAGKVYRDYNVSVKA 207
AV+Q+C + CY+ I + P L++LLE+ +I K GVGI D K+ RD++V +++
Sbjct: 99 AVIQLCVSESKCYLFHISSMSVFPQGLKMLLENKSIRKAGVGIEGDQWKLLRDFDVKLES 158
Query: 208 SEDLSYLAKHKIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAATD 267
+L+ +A K+ ++ W L L + ++ K+L K IR NW LS+DQ LYAATD
Sbjct: 159 FVELTDVANRKLKC-AETWSLNGLVKHVLGKQLLKDKSIRCSNWSDFPLSEDQKLYAATD 217
Query: 268 AFASWHLYQVLKSLPEPVK 286
A+A +YQ L++L + V+
Sbjct: 218 AYAGLIIYQKLENLGDAVQ 236
>UNIPROTKB|F1PZR2 [details] [associations]
symbol:WRN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0043140 "ATP-dependent 3'-5' DNA helicase activity"
evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002121 InterPro:IPR002562
InterPro:IPR004589 InterPro:IPR010997 InterPro:IPR011545
InterPro:IPR012337 InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271
Pfam:PF00570 Pfam:PF01612 Pfam:PF09382 PROSITE:PS50967
PROSITE:PS51194 SMART:SM00341 SMART:SM00474 SMART:SM00490
SMART:SM00956 GO:GO:0005524 GO:GO:0006260 GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676 GO:GO:0005622
GO:GO:0006310 SUPFAM:SSF53098 GO:GO:0008408 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043140
GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80 SUPFAM:SSF47819
TIGRFAMs:TIGR00614 EMBL:AAEX03010418 Ensembl:ENSCAFT00000010396
Uniprot:F1PZR2
Length = 1336
Score = 292 (107.8 bits), Expect = 2.4e-24, P = 2.4e-24
Identities = 71/197 (36%), Positives = 107/197 (54%)
Query: 91 MRFGGQILYSRTSTEVEMAAIELRRILEANKSEAGQVVVGFDIEWKPTFRKGVLPRKAAV 150
+ F G I+YS +++ L + N S G VVGFD+EW P + K P + A+
Sbjct: 52 LEFTGSIVYSYEASDCSF----LSEDISMNLSTGG--VVGFDMEWPPVYTKRK-PSRVAL 104
Query: 151 MQICGDSNHCYVMQIIHSGI-PPSLQLLLEDSTILKVGVGIGSDAGKVYRDYNVSVKASE 209
+Q+C N CY+ I + P L++LLE+ I K GVGI D K+ D+++ +K
Sbjct: 105 IQLCVSENKCYLFHISSMSVFPQGLKMLLENEAIKKAGVGIKGDQRKLLCDFDIDLKNFV 164
Query: 210 DLSYLAKHKIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAATDAF 269
+L+ +A K+ ++ W L L + L K+L K IR NW L++DQ LYAATDA+
Sbjct: 165 ELTDVANEKLKC-TETWSLNGLVKHLFGKQLLKDRSIRCSNWGDFPLTEDQKLYAATDAY 223
Query: 270 ASWHLYQVLKSLPEPVK 286
A +YQ L+ L V+
Sbjct: 224 AGLIIYQKLEILGNAVE 240
>MGI|MGI:109635 [details] [associations]
symbol:Wrn "Werner syndrome homolog (human)" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000287 "magnesium ion binding" evidence=ISO] [GO:0000403
"Y-form DNA binding" evidence=ISO] [GO:0000405 "bubble DNA binding"
evidence=ISO] [GO:0000723 "telomere maintenance"
evidence=ISO;IGI;IMP] [GO:0000731 "DNA synthesis involved in DNA
repair" evidence=ISO] [GO:0001302 "replicative cell aging"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003678 "DNA helicase
activity" evidence=ISO] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISO] [GO:0004386 "helicase activity" evidence=ISO]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=ISO;IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0005813 "centrosome" evidence=ISO]
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=IEA] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0006259 "DNA metabolic process" evidence=ISO;IMP] [GO:0006260
"DNA replication" evidence=ISO;IMP] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=ISO]
[GO:0006302 "double-strand break repair" evidence=ISO] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=ISO] [GO:0006979 "response to oxidative
stress" evidence=ISO] [GO:0007569 "cell aging" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0008408 "3'-5'
exonuclease activity" evidence=ISO;IDA] [GO:0009267 "cellular
response to starvation" evidence=ISO] [GO:0009378 "four-way
junction helicase activity" evidence=ISO] [GO:0010225 "response to
UV-C" evidence=ISO] [GO:0010259 "multicellular organismal aging"
evidence=ISO;IGI] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0030145 "manganese
ion binding" evidence=ISO] [GO:0031297 "replication fork
processing" evidence=ISO] [GO:0032066 "nucleolus to nucleoplasm
transport" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032508 "DNA duplex unwinding" evidence=ISO]
[GO:0040009 "regulation of growth rate" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0042981
"regulation of apoptotic process" evidence=ISO] [GO:0043138 "3'-5'
DNA helicase activity" evidence=ISO] [GO:0043140 "ATP-dependent
3'-5' DNA helicase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051345 "positive regulation of hydrolase
activity" evidence=ISO] [GO:0051880 "G-quadruplex DNA binding"
evidence=ISO] [GO:0071480 "cellular response to gamma radiation"
evidence=ISO] InterPro:IPR001650 InterPro:IPR002121
InterPro:IPR002562 InterPro:IPR004589 InterPro:IPR010997
InterPro:IPR011545 InterPro:IPR012337 InterPro:IPR018982
Pfam:PF00270 Pfam:PF00271 Pfam:PF00570 Pfam:PF01612 Pfam:PF09382
PROSITE:PS00690 PROSITE:PS50967 PROSITE:PS51194 SMART:SM00341
SMART:SM00474 SMART:SM00490 SMART:SM00956 MGI:MGI:109635
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 GO:GO:0000287
GO:GO:0003677 GO:GO:0006260 GO:GO:0006281 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0001302 GO:GO:0030145 GO:GO:0006310
GO:GO:0009267 SUPFAM:SSF53098 GO:GO:0040009 GO:GO:0008408
GO:GO:0010259 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043140 GO:GO:0000723 eggNOG:COG0514
GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80 SUPFAM:SSF47819
TIGRFAMs:TIGR00614 GO:GO:0032066 KO:K10900 CTD:7486
HOGENOM:HOG000146447 HOVERGEN:HBG000325 OMA:GIEGDQW
OrthoDB:EOG4DNF3J EMBL:D86527 EMBL:D86526 EMBL:AF091215
EMBL:AF091216 EMBL:AF241636 EMBL:AC153789 EMBL:AC115809
EMBL:BC050921 EMBL:BC060700 IPI:IPI00113830 PIR:T17452 PIR:T30247
RefSeq:NP_001116294.1 RefSeq:NP_035851.3 UniGene:Mm.228805 PDB:2E6L
PDB:2E6M PDBsum:2E6L PDBsum:2E6M ProteinModelPortal:O09053
SMR:O09053 DIP:DIP-27642N STRING:O09053 PhosphoSite:O09053
PaxDb:O09053 PRIDE:O09053 Ensembl:ENSMUST00000033990
Ensembl:ENSMUST00000033991 GeneID:22427 KEGG:mmu:22427
InParanoid:Q80YP9 EvolutionaryTrace:O09053 NextBio:302865
Bgee:O09053 CleanEx:MM_WRN Genevestigator:O09053
GermOnline:ENSMUSG00000031583 Uniprot:O09053
Length = 1401
Score = 292 (107.8 bits), Expect = 2.5e-24, P = 2.5e-24
Identities = 69/194 (35%), Positives = 111/194 (57%)
Query: 89 PAMRFGGQILYSRTSTEVEMAAIELRRILEANKSEAGQVVVGFDIEWKPTFRKGVLPRKA 148
P + F G I+YS +++ + ++ L S+ VVGFD+EW P ++ G R
Sbjct: 39 PFLEFPGSIVYSYEASDCSFLSEDISMRL----SDGD--VVGFDMEWPPIYKPGKRSR-V 91
Query: 149 AVMQICGDSNHCYVMQIIHSGI-PPSLQLLLEDSTILKVGVGIGSDAGKVYRDYNVSVKA 207
AV+Q+C + CY+ I + P L++LLE+ +I K GVGI D K+ RD++V +++
Sbjct: 92 AVIQLCVSESKCYLFHISSMSVFPQGLKMLLENKSIKKAGVGIEGDQWKLLRDFDVKLES 151
Query: 208 SEDLSYLAKHKIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAATD 267
+L+ +A K+ ++ W L L + ++ K+L K IR NW L++DQ LYAATD
Sbjct: 152 FVELTDVANEKLKC-AETWSLNGLVKHVLGKQLLKDKSIRCSNWSNFPLTEDQKLYAATD 210
Query: 268 AFASWHLYQVLKSL 281
A+A +YQ L +L
Sbjct: 211 AYAGLIIYQKLGNL 224
>UNIPROTKB|F1PZR3 [details] [associations]
symbol:WRN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0043140 "ATP-dependent 3'-5' DNA helicase activity"
evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002121 InterPro:IPR002562
InterPro:IPR004589 InterPro:IPR010997 InterPro:IPR011545
InterPro:IPR012337 InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271
Pfam:PF00570 Pfam:PF01612 Pfam:PF09382 PROSITE:PS50967
PROSITE:PS51194 SMART:SM00341 SMART:SM00474 SMART:SM00490
SMART:SM00956 GO:GO:0005524 GO:GO:0006260 GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676 GO:GO:0005622
GO:GO:0006310 SUPFAM:SSF53098 GO:GO:0008408 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043140
GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80 SUPFAM:SSF47819
TIGRFAMs:TIGR00614 EMBL:AAEX03010418 Ensembl:ENSCAFT00000010395
Uniprot:F1PZR3
Length = 1499
Score = 292 (107.8 bits), Expect = 2.8e-24, P = 2.8e-24
Identities = 71/197 (36%), Positives = 107/197 (54%)
Query: 91 MRFGGQILYSRTSTEVEMAAIELRRILEANKSEAGQVVVGFDIEWKPTFRKGVLPRKAAV 150
+ F G I+YS +++ L + N S G VVGFD+EW P + K P + A+
Sbjct: 47 LEFTGSIVYSYEASDCSF----LSEDISMNLSTGG--VVGFDMEWPPVYTKRK-PSRVAL 99
Query: 151 MQICGDSNHCYVMQIIHSGI-PPSLQLLLEDSTILKVGVGIGSDAGKVYRDYNVSVKASE 209
+Q+C N CY+ I + P L++LLE+ I K GVGI D K+ D+++ +K
Sbjct: 100 IQLCVSENKCYLFHISSMSVFPQGLKMLLENEAIKKAGVGIKGDQRKLLCDFDIDLKNFV 159
Query: 210 DLSYLAKHKIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAATDAF 269
+L+ +A K+ ++ W L L + L K+L K IR NW L++DQ LYAATDA+
Sbjct: 160 ELTDVANEKLKC-TETWSLNGLVKHLFGKQLLKDRSIRCSNWGDFPLTEDQKLYAATDAY 218
Query: 270 ASWHLYQVLKSLPEPVK 286
A +YQ L+ L V+
Sbjct: 219 AGLIIYQKLEILGNAVE 235
>UNIPROTKB|F1PUF8 [details] [associations]
symbol:WRN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0043140 "ATP-dependent 3'-5' DNA helicase activity"
evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002121 InterPro:IPR002562
InterPro:IPR004589 InterPro:IPR010997 InterPro:IPR011545
InterPro:IPR012337 InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271
Pfam:PF00570 Pfam:PF01612 Pfam:PF09382 PROSITE:PS50967
PROSITE:PS51194 SMART:SM00341 SMART:SM00474 SMART:SM00490
SMART:SM00956 GO:GO:0005524 GO:GO:0006260 GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676 GO:GO:0005622
GO:GO:0006310 SUPFAM:SSF53098 GO:GO:0008408 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043140
GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80 SUPFAM:SSF47819
TIGRFAMs:TIGR00614 EMBL:AAEX03010418 Ensembl:ENSCAFT00000037050
OMA:TERICLM Uniprot:F1PUF8
Length = 1574
Score = 292 (107.8 bits), Expect = 3.0e-24, P = 3.0e-24
Identities = 71/197 (36%), Positives = 107/197 (54%)
Query: 91 MRFGGQILYSRTSTEVEMAAIELRRILEANKSEAGQVVVGFDIEWKPTFRKGVLPRKAAV 150
+ F G I+YS +++ L + N S G VVGFD+EW P + K P + A+
Sbjct: 166 LEFTGSIVYSYEASDCSF----LSEDISMNLSTGG--VVGFDMEWPPVYTKRK-PSRVAL 218
Query: 151 MQICGDSNHCYVMQIIHSGI-PPSLQLLLEDSTILKVGVGIGSDAGKVYRDYNVSVKASE 209
+Q+C N CY+ I + P L++LLE+ I K GVGI D K+ D+++ +K
Sbjct: 219 IQLCVSENKCYLFHISSMSVFPQGLKMLLENEAIKKAGVGIKGDQRKLLCDFDIDLKNFV 278
Query: 210 DLSYLAKHKIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAATDAF 269
+L+ +A K+ ++ W L L + L K+L K IR NW L++DQ LYAATDA+
Sbjct: 279 ELTDVANEKLKC-TETWSLNGLVKHLFGKQLLKDRSIRCSNWGDFPLTEDQKLYAATDAY 337
Query: 270 ASWHLYQVLKSLPEPVK 286
A +YQ L+ L V+
Sbjct: 338 AGLIIYQKLEILGNAVE 354
>TAIR|locus:504955532 [details] [associations]
symbol:AT4G13885 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612
EMBL:CP002687 GO:GO:0003676 GO:GO:0005622 SUPFAM:SSF53098
GO:GO:0008408 UniGene:At.45865 IPI:IPI00532076 RefSeq:NP_680682.1
ProteinModelPortal:F4JTU8 SMR:F4JTU8 EnsemblPlants:AT4G13885.1
GeneID:827023 KEGG:ath:AT4G13885 Uniprot:F4JTU8
Length = 263
Score = 183 (69.5 bits), Expect = 7.4e-20, Sum P(2) = 7.4e-20
Identities = 35/46 (76%), Positives = 38/46 (82%)
Query: 240 LKKPNRIRLGNWEADVLSKDQLLYAATDAFASWHLYQVLKSLPEPV 285
L KPNRIRLGNWE LSK QL YAATDA+ASWHL+QVLK LP+ V
Sbjct: 215 LLKPNRIRLGNWEVHPLSKQQLQYAATDAYASWHLHQVLKDLPDAV 260
Score = 89 (36.4 bits), Expect = 7.4e-20, Sum P(2) = 7.4e-20
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 174 LQLLLEDSTILKVGVGIGSDAGKVYRDYNV 203
LQ L+EDST++KVG+GI D+ K++ DY +
Sbjct: 186 LQHLIEDSTLVKVGIGIDGDSVKLFHDYGL 215
>UNIPROTKB|B3NZ68 [details] [associations]
symbol:WRNexo "Werner Syndrome-like exonuclease"
species:7220 "Drosophila erecta" [GO:0005634 "nucleus"
evidence=ISS] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISS] [GO:0045950 "negative regulation of mitotic
recombination" evidence=ISS] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 GO:GO:0005634 GO:GO:0046872
GO:GO:0003676 SUPFAM:SSF53098 GO:GO:0008408 EMBL:CH954181
GO:GO:0045950 OrthoDB:EOG473N7C RefSeq:XP_001979652.1
ProteinModelPortal:B3NZ68 EnsemblMetazoa:FBtr0136534 GeneID:6551855
KEGG:der:Dere_GG16480 FlyBase:FBgn0108711 Uniprot:B3NZ68
Length = 354
Score = 235 (87.8 bits), Expect = 9.7e-20, P = 9.7e-20
Identities = 62/201 (30%), Positives = 103/201 (51%)
Query: 87 KYPAMRFGGQILYSRTSTEVEMAAIELRRILEANKSEAGQVVVGFDIEWKPTFRKGVLPR 146
K P +++ G I Y S ++ +A ++ + +E K E V + FD+EW +F+ G P
Sbjct: 120 KLPFIKYKGAIKYYTESQDIAASADDVLQWVEKQKDEV--VPMAFDMEWPFSFQTG--PG 175
Query: 147 KAAVMQICGDSNHCYVMQIIH-SGIPPSLQLLLEDSTILKVGVGIGSDAGKVYRDY-NVS 204
K+AV+QIC D CY+ Q+ + +P L L+ S + GV I +D K+ RD+ VS
Sbjct: 176 KSAVIQICVDEKCCYIYQLTNLKKLPAVLVALINHSKVRLHGVNIKNDFRKLARDFPEVS 235
Query: 205 ----VKASEDLSYLAKH--KIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSK 258
++ DL + GG +W L LT + K + K ++R+ W L +
Sbjct: 236 AEPLIEKCVDLGVWCNEVCETGG---RWSLERLTNFIAKKAMDKSKKVRMSKWHVIPLDE 292
Query: 259 DQLLYAATDAFASWHLYQVLK 279
+QL+YAA D + +Y+ L+
Sbjct: 293 NQLMYAAIDVYIGQVIYRELE 313
>FB|FBgn0038608 [details] [associations]
symbol:WRNexo "WRN exonuclease" species:7227 "Drosophila
melanogaster" [GO:0008408 "3'-5' exonuclease activity"
evidence=ISS;IMP] [GO:0000738 "DNA catabolic process,
exonucleolytic" evidence=IC] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0045950 "negative regulation of mitotic
recombination" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612 SMART:SM00474
EMBL:AE014297 GO:GO:0005634 GO:GO:0046872 GO:GO:0003676
SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0045950 GO:GO:0000738
eggNOG:NOG266861 OrthoDB:EOG473N7C EMBL:EF680279 EMBL:EF680280
EMBL:AY051647 EMBL:BT050502 RefSeq:NP_001163646.1
RefSeq:NP_650715.3 UniGene:Dm.4528 ProteinModelPortal:Q9VE86
SMR:Q9VE86 MINT:MINT-1678399 STRING:Q9VE86
EnsemblMetazoa:FBtr0083586 GeneID:42208 KEGG:dme:Dmel_CG7670
UCSC:CG7670-RA CTD:42208 FlyBase:FBgn0038608
GeneTree:ENSGT00660000096992 InParanoid:Q961E1 PhylomeDB:Q9VE86
ChiTaRS:WRNexo GenomeRNAi:42208 NextBio:827674 Bgee:Q9VE86
Uniprot:Q9VE86
Length = 353
Score = 232 (86.7 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 62/206 (30%), Positives = 107/206 (51%)
Query: 87 KYPAMRFGGQILYSRTSTEVEMAAIELRRILEANKSEAGQVVVGFDIEWKPTFRKGVLPR 146
K P +++ G I Y S ++ +A ++ + +E K E V + FD+EW +F+ G P
Sbjct: 119 KLPFIKYKGAIKYFTESQDIAASADDVLQWVEKQKDEV--VPMAFDMEWPFSFQTG--PG 174
Query: 147 KAAVMQICGDSNHCYVMQIIH-SGIPPSLQLLLEDSTILKVGVGIGSDAGKVYRDY-NVS 204
K+AV+QIC D CY+ Q+ + +P +L L+ + GV I +D K+ RD+ V+
Sbjct: 175 KSAVIQICVDEKCCYIYQLTNVKKLPAALVALINHPKVRLHGVNIKNDFRKLARDFPEVT 234
Query: 205 ----VKASEDLSYLAKHKIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQ 260
++ DL L +++ +W L LT + K + K ++R+ W L ++Q
Sbjct: 235 AEPLIEKCVDLG-LWCNEVCETGGRWSLERLTNFIAKKAMDKSKKVRMSKWHVIPLDENQ 293
Query: 261 LLYAATDAFASWHLYQVLKSLPEPVK 286
L+YAA D + +Y+ L+ E VK
Sbjct: 294 LMYAAIDVYIGQVIYRELERR-EKVK 318
>UNIPROTKB|B4PLB3 [details] [associations]
symbol:WRNexo "Werner Syndrome-like exonuclease"
species:7245 "Drosophila yakuba" [GO:0005634 "nucleus"
evidence=ISS] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISS] [GO:0045950 "negative regulation of mitotic
recombination" evidence=ISS] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 GO:GO:0005634 GO:GO:0046872
GO:GO:0003676 SUPFAM:SSF53098 EMBL:CM000160 GO:GO:0008408
GO:GO:0045950 eggNOG:NOG266861 OrthoDB:EOG473N7C
RefSeq:XP_002096183.1 ProteinModelPortal:B4PLB3 STRING:B4PLB3
EnsemblMetazoa:FBtr0271725 GeneID:6535554 KEGG:dya:Dyak_GE25207
FlyBase:FBgn0242291 Uniprot:B4PLB3
Length = 354
Score = 228 (85.3 bits), Expect = 6.7e-19, P = 6.7e-19
Identities = 59/199 (29%), Positives = 103/199 (51%)
Query: 87 KYPAMRFGGQILYSRTSTEVEMAAIELRRILEANKSEAGQVVVGFDIEWKPTFRKGVLPR 146
K P +++ G I Y + ++ +A ++ + +E K E V + FD+EW +F+ G P
Sbjct: 120 KLPFIKYKGAIKYYTENQDIAASADDVLQWVEKQKDEV--VPMAFDMEWPFSFQTG--PG 175
Query: 147 KAAVMQICGDSNHCYVMQIIH-SGIPPSLQLLLEDSTILKVGVGIGSDAGKVYRDY-NVS 204
K+AV+QIC D CY+ Q+ + +P L L+ + GV I +D K+ RD+ VS
Sbjct: 176 KSAVIQICVDEKCCYIYQLTNLKKLPAVLVALINHPKVRLHGVNIKNDFRKLARDFPEVS 235
Query: 205 ----VKASEDLSYLAKHKIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQ 260
++ DL L +++ +W L LT + K + K ++R+ W L ++Q
Sbjct: 236 AEPLIEKCVDLG-LWCNEVCETGGRWSLERLTNFIAKKAMDKSKKVRMSKWHVIPLDENQ 294
Query: 261 LLYAATDAFASWHLYQVLK 279
L+YAA D + +Y+ L+
Sbjct: 295 LMYAAIDVYIGQVIYRELE 313
>UNIPROTKB|B4I298 [details] [associations]
symbol:WRNexo "Werner Syndrome-like exonuclease"
species:7238 "Drosophila sechellia" [GO:0005634 "nucleus"
evidence=ISS] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISS] [GO:0045950 "negative regulation of mitotic
recombination" evidence=ISS] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 GO:GO:0005634 GO:GO:0046872
GO:GO:0003676 SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0045950
EMBL:CH480820 OrthoDB:EOG473N7C RefSeq:XP_002038237.1
ProteinModelPortal:B4I298 GeneID:6613768 KEGG:dse:Dsec_GM18710
FlyBase:FBgn0173615 Uniprot:B4I298
Length = 354
Score = 226 (84.6 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 60/206 (29%), Positives = 107/206 (51%)
Query: 87 KYPAMRFGGQILYSRTSTEVEMAAIELRRILEANKSEAGQVVVGFDIEWKPTFRKGVLPR 146
K P +++ G I Y S ++ +A ++ + +E K + V + FD+EW +F+ G P
Sbjct: 120 KLPFIKYKGAIKYFTESQDIAASADDVLQWVEKQKDDV--VPMAFDMEWPFSFQTG--PG 175
Query: 147 KAAVMQICGDSNHCYVMQIIH-SGIPPSLQLLLEDSTILKVGVGIGSDAGKVYRDY-NVS 204
K++V+QIC D CY+ Q+ + +P +L L+ + GV I +D K+ RD+ V+
Sbjct: 176 KSSVIQICVDEKCCYIYQLTNVKKLPAALVALINHPKVRLHGVNIKNDFRKLARDFPEVT 235
Query: 205 ----VKASEDLSYLAKHKIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQ 260
++ DL L +++ +W L LT + K + K ++R+ W L ++Q
Sbjct: 236 AEPLIEKCVDLG-LWCNEVCETGGRWSLERLTNFIAKKAMDKSKKVRMSKWHVIPLDENQ 294
Query: 261 LLYAATDAFASWHLYQVLKSLPEPVK 286
L+YAA D + +Y+ L+ E VK
Sbjct: 295 LMYAAIDVYIGQVIYRELERR-EKVK 319
>UNIPROTKB|B4QUF6 [details] [associations]
symbol:WRNexo "Werner Syndrome-like exonuclease"
species:7240 "Drosophila simulans" [GO:0005634 "nucleus"
evidence=ISS] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISS] [GO:0045950 "negative regulation of mitotic
recombination" evidence=ISS] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 GO:GO:0005634 GO:GO:0046872
GO:GO:0003676 SUPFAM:SSF53098 GO:GO:0008408 EMBL:CM000364
GO:GO:0045950 OrthoDB:EOG473N7C RefSeq:XP_002102953.1 PRIDE:B4QUF6
EnsemblMetazoa:FBtr0220088 GeneID:6727574 KEGG:dsi:Dsim_GD20178
FlyBase:FBgn0191656 Uniprot:B4QUF6
Length = 354
Score = 226 (84.6 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 60/206 (29%), Positives = 107/206 (51%)
Query: 87 KYPAMRFGGQILYSRTSTEVEMAAIELRRILEANKSEAGQVVVGFDIEWKPTFRKGVLPR 146
K P +++ G I Y S ++ +A ++ + +E K + V + FD+EW +F+ G P
Sbjct: 120 KLPFIKYKGAIKYFTESQDIAASADDVLQWVEKQKDDV--VPMAFDMEWPFSFQTG--PG 175
Query: 147 KAAVMQICGDSNHCYVMQIIH-SGIPPSLQLLLEDSTILKVGVGIGSDAGKVYRDY-NVS 204
K++V+QIC D CY+ Q+ + +P +L L+ + GV I +D K+ RD+ V+
Sbjct: 176 KSSVIQICVDEKCCYIYQLTNVKKLPAALVALINHPKVRLHGVNIKNDFRKLARDFPEVT 235
Query: 205 ----VKASEDLSYLAKHKIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQ 260
++ DL L +++ +W L LT + K + K ++R+ W L ++Q
Sbjct: 236 AEPLIEKCVDLG-LWCNEVCETGGRWSLERLTNFIAKKAMDKSKKVRMSKWHVIPLDENQ 294
Query: 261 LLYAATDAFASWHLYQVLKSLPEPVK 286
L+YAA D + +Y+ L+ E VK
Sbjct: 295 LMYAAIDVYIGQVIYRELERR-EKVK 319
>UNIPROTKB|B4M401 [details] [associations]
symbol:WRNexo "Werner Syndrome-like exonuclease"
species:7244 "Drosophila virilis" [GO:0005634 "nucleus"
evidence=ISS] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISS] [GO:0045950 "negative regulation of mitotic
recombination" evidence=ISS] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 GO:GO:0005634 GO:GO:0046872
GO:GO:0003676 SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0045950
EMBL:CH940652 eggNOG:NOG266861 OrthoDB:EOG473N7C
RefSeq:XP_002056250.1 ProteinModelPortal:B4M401 STRING:B4M401
GeneID:6632852 KEGG:dvi:Dvir_GJ10837 FlyBase:FBgn0198106
InParanoid:B4M401 Uniprot:B4M401
Length = 330
Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 61/198 (30%), Positives = 101/198 (51%)
Query: 87 KYPAMRFGGQILYSRTSTEVEMAAIELRRILEANKSEAGQVVVGFDIEWKPTFRKGVLPR 146
K P +++ G I Y S E+ +A E+ + +E ++ A V + FD+EW +F+ G P
Sbjct: 95 KLPFIKYRGAIKYYTESHEIAASADEVMQWVE-KQTNADVVPLAFDMEWPFSFQTG--PG 151
Query: 147 KAAVMQICGDSNHCYVMQIIH-SGIPPSLQLLLEDSTILKVGVGIGSDAGKVYRDY-NVS 204
K++V+QIC + CYV Q+ IP +L LL S + GV I +D K+ RD+ V+
Sbjct: 152 KSSVIQICVEERCCYVYQLSKLKRIPAALVALLNHSKVRLHGVNIKADFRKLERDFPEVA 211
Query: 205 ----VKASEDLSYLAKH--KIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSK 258
++ DL + GG +W L L + K + K ++R+ W L +
Sbjct: 212 AEPLIEKCIDLGVWCNEVCETGG---RWSLERLANFIAKKAMDKSKKVRMSKWHVIPLDE 268
Query: 259 DQLLYAATDAFASWHLYQ 276
+QL+YAA D + +Y+
Sbjct: 269 NQLMYAAIDVYIGQVIYR 286
>UNIPROTKB|B4JF25 [details] [associations]
symbol:WRNexo "Werner Syndrome-like exonuclease"
species:7222 "Drosophila grimshawi" [GO:0005634 "nucleus"
evidence=ISS] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISS] [GO:0045950 "negative regulation of mitotic
recombination" evidence=ISS] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 GO:GO:0005634 GO:GO:0046872
GO:GO:0003676 SUPFAM:SSF53098 GO:GO:0008408 EMBL:CH916369
GO:GO:0045950 eggNOG:NOG266861 OrthoDB:EOG473N7C
RefSeq:XP_001990244.1 ProteinModelPortal:B4JF25 STRING:B4JF25
EnsemblMetazoa:FBtr0154645 GeneID:6563370 KEGG:dgr:Dgri_GH19231
FlyBase:FBgn0126697 InParanoid:B4JF25 OMA:FIAKKAM Uniprot:B4JF25
Length = 331
Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 62/208 (29%), Positives = 104/208 (50%)
Query: 87 KYPAMRFGGQILYSRTSTEVEMAAIELRRILEANKSEAGQVVVGFDIEWKPTFRKGVLPR 146
K P +++ G I Y S E+ +A E+ + +E + V + FD+EW +F+ G P
Sbjct: 96 KLPFIKYSGAIKYFTESQEIAASADEVMQWVE-KQINMDVVPMAFDMEWPFSFQTG--PG 152
Query: 147 KAAVMQICGDSNHCYVMQIIH-SGIPPSLQLLLEDSTILKVGVGIGSDAGKVYRDY-NVS 204
K++V+QIC D CYV Q+ + IP +L L+ + GV I +D K+ RD+ +S
Sbjct: 153 KSSVIQICVDERCCYVYQLSKLNKIPAALAALINHPKVRLHGVNIKADFRKLERDFPEMS 212
Query: 205 ----VKASEDLSYLAKH--KIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSK 258
++ DL + GG +W L L + K + K ++R+ W L +
Sbjct: 213 AEPLIEKCVDLGVWCNQVCETGG---RWSLERLANFIAKKAMDKSKKVRMSKWHVIPLDE 269
Query: 259 DQLLYAATDAFASWHLYQVLKSLPEPVK 286
+QL+YAA D + +Y+ ++ E VK
Sbjct: 270 NQLMYAAIDVYIGQVIYREIEQR-ETVK 296
>UNIPROTKB|B3LWP6 [details] [associations]
symbol:WRNexo "Werner Syndrome-like exonuclease"
species:7217 "Drosophila ananassae" [GO:0005634 "nucleus"
evidence=ISS] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISS] [GO:0045950 "negative regulation of mitotic
recombination" evidence=ISS] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 GO:GO:0005634 GO:GO:0046872
GO:GO:0003676 SUPFAM:SSF53098 GO:GO:0008408 EMBL:CH902617
GO:GO:0045950 eggNOG:NOG266861 RefSeq:XP_001954123.1
ProteinModelPortal:B3LWP6 STRING:B3LWP6 PRIDE:B3LWP6 GeneID:6500896
KEGG:dan:Dana_GF18118 FlyBase:FBgn0095136 InParanoid:B3LWP6
OrthoDB:EOG473N7C Uniprot:B3LWP6
Length = 355
Score = 222 (83.2 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 61/211 (28%), Positives = 105/211 (49%)
Query: 87 KYPAMRFGGQILYSRTSTEVEMAAIELRRILEANKSEAGQVVVGFDIEWKPTFRKGVLPR 146
K P +++ G I Y S ++ +A ++ + +E K + V + FD+EW +F+ G P
Sbjct: 121 KLPFIKYKGAIKYYTESQDIAASADDVMQWVEKQKEDV--VPMAFDMEWPFSFQTG--PG 176
Query: 147 KAAVMQICGDSNHCYVMQIIH-SGIPPSLQLLLEDSTILKVGVGIGSDAGKVYRDY-NVS 204
K++V+QIC D CY+ Q+ + +P +L L+ + GV I +D K+ RD+ VS
Sbjct: 177 KSSVIQICVDEKCCYIYQLTNLKKLPSALVALINHPKVRLHGVNIKADFRKLQRDFPEVS 236
Query: 205 VKA----SEDLSYLAKHKIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQ 260
A DL + I +W L L + K + K ++R+ W L ++Q
Sbjct: 237 ADALIEKCVDLGVWC-NVICQTGGRWSLERLANFICRKAMDKSKKVRMSKWHVIPLDENQ 295
Query: 261 LLYAATDAFASWHLYQVLKSLPEPVKDATDQ 291
L+YAA D + +Y+ L+ E K A ++
Sbjct: 296 LMYAAIDVYIGQVIYRDLEQR-EKTKLANEE 325
>UNIPROTKB|B4K934 [details] [associations]
symbol:WRNexo "Werner Syndrome-like exonuclease"
species:7230 "Drosophila mojavensis" [GO:0005634 "nucleus"
evidence=ISS] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISS] [GO:0045950 "negative regulation of mitotic
recombination" evidence=ISS] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 GO:GO:0005634 GO:GO:0046872
GO:GO:0003676 SUPFAM:SSF53098 GO:GO:0008408 EMBL:CH933806
GO:GO:0045950 OrthoDB:EOG473N7C RefSeq:XP_001998986.1
ProteinModelPortal:B4K934 PRIDE:B4K934 EnsemblMetazoa:FBtr0174989
GeneID:6572881 KEGG:dmo:Dmoj_GI24264 FlyBase:FBgn0146987
InParanoid:B4K934 Uniprot:B4K934
Length = 329
Score = 216 (81.1 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 58/201 (28%), Positives = 102/201 (50%)
Query: 87 KYPAMRFGGQILYSRTSTEVEMAAIELRRILEANKSEAGQVVVGFDIEWKPTFRKGVLPR 146
K P +++ G I Y S E+ +A E+ + ++ ++ V + FD+EW +F+ G P
Sbjct: 94 KLPFIKYRGAIKYFTESQEIAASADEVMQWVD-QQTHTEIVPMAFDMEWPFSFQTG--PG 150
Query: 147 KAAVMQICGDSNHCYVMQIIH-SGIPPSLQLLLEDSTILKVGVGIGSDAGKVYRDY-NVS 204
K++V+QIC D CYV Q+ + IP +L L+ + GV I +D K+ RD+ V+
Sbjct: 151 KSSVIQICVDERCCYVYQLSNLKKIPAALVALINHPKVRLHGVNIKADFRKLARDFPEVA 210
Query: 205 ----VKASEDLSYLAKH--KIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSK 258
++ DL + GG +W L L + K + K ++R+ W L +
Sbjct: 211 AEPLIEKCVDLGVWCNEVCETGG---RWSLERLANFIAKKAMDKSKKVRMSKWHVIPLDE 267
Query: 259 DQLLYAATDAFASWHLYQVLK 279
+QL+YAA D + +Y+ ++
Sbjct: 268 NQLMYAAIDVYIGQVIYREIE 288
>UNIPROTKB|F1S4B8 [details] [associations]
symbol:EXD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008408 "3'-5' exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 GO:GO:0003676 GO:GO:0005622
SUPFAM:SSF53098 GO:GO:0008408 CTD:55218 OMA:QVIYAAR
GeneTree:ENSGT00390000014318 EMBL:CU468204 EMBL:CU633187
RefSeq:XP_001925126.4 Ensembl:ENSSSCT00000002567 GeneID:100155300
KEGG:ssc:100155300 Uniprot:F1S4B8
Length = 624
Score = 224 (83.9 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 65/184 (35%), Positives = 94/184 (51%)
Query: 128 VVGFDIEWKPTFRKGVLPRKAAVMQICGDSNHCYVMQI---IHSG--IPPSLQLLLEDST 182
V+G D EW K P +++Q+ S C ++++ I G +P +L +L D T
Sbjct: 107 VLGIDCEWVNLEGKAS-P--LSLLQMASPSGFCVLVRLPKLISGGKTLPKTLLDILADGT 163
Query: 183 ILKVGVGIGSDAGKVYRDYNVSVKASEDLSYLA-KHKIGGDSQKWGLASLTEMLVCKELK 241
ILKVGVG DA K+ +DY + VK DL YLA +H+ S L SL E ++ L
Sbjct: 164 ILKVGVGCSEDASKLLQDYGLVVKGCLDLRYLAMRHRNNLLSNGLSLKSLAETVLNFPLD 223
Query: 242 KPNRIRLGNWEADVLSKDQLLYAATDAFASWHLYQVLKSLPEPVKDATDQGNQRCS-RLD 300
K +R NW+A+ L++DQ++YAA DA S L+ L P ++ N R R
Sbjct: 224 KSLLLRCSNWDAENLTEDQVIYAARDAQISVALFLRLLGYPFSRNSTPEENNDRIGWRKV 283
Query: 301 LHNC 304
L C
Sbjct: 284 LEKC 287
>UNIPROTKB|B4G5C9 [details] [associations]
symbol:WRNexo "Werner Syndrome-like exonuclease"
species:7234 "Drosophila persimilis" [GO:0005634 "nucleus"
evidence=ISS] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISS] [GO:0045950 "negative regulation of mitotic
recombination" evidence=ISS] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 GO:GO:0005634 GO:GO:0046872
GO:GO:0003676 SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0045950
EMBL:CH479179 OrthoDB:EOG473N7C RefSeq:XP_002013809.1
ProteinModelPortal:B4G5C9 PRIDE:B4G5C9 GeneID:6588337
KEGG:dpe:Dper_GL23198 FlyBase:FBgn0160788 Uniprot:B4G5C9
Length = 355
Score = 216 (81.1 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 56/199 (28%), Positives = 102/199 (51%)
Query: 87 KYPAMRFGGQILYSRTSTEVEMAAIELRRILEANKSEAGQVVVGFDIEWKPTFRKGVLPR 146
K P +++ G I Y + ++ +A ++ + ++ +++ V + FD+EW +F+ G P
Sbjct: 120 KLPFIKYRGAIKYFTENQDIAASADDVMQWVD-KQTDVDVVPMAFDMEWPFSFQTG--PG 176
Query: 147 KAAVMQICGDSNHCYVMQIIH-SGIPPSLQLLLEDSTILKVGVGIGSDAGKVYRDY-NVS 204
K++V+QIC D CYV Q+ + +P +L L+ + GV I +D K+ RD+ VS
Sbjct: 177 KSSVIQICVDEKCCYVYQLTNLKKLPAALVALINHPKVRLHGVNIKADFRKLQRDFPEVS 236
Query: 205 VKA----SEDLSYLAKHKIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQ 260
A DL ++I +W L L + K + K ++R+ W L ++Q
Sbjct: 237 ADALIEKCVDLGVWC-NEICETGGRWSLERLANFIAKKAMDKSKKVRMSKWHVIPLDENQ 295
Query: 261 LLYAATDAFASWHLYQVLK 279
L+YAA D + +Y+ L+
Sbjct: 296 LMYAAIDVYIGQVIYRDLE 314
>UNIPROTKB|Q299L3 [details] [associations]
symbol:WRNexo "Werner Syndrome-like exonuclease"
species:46245 "Drosophila pseudoobscura pseudoobscura" [GO:0005634
"nucleus" evidence=ISS] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISS] [GO:0045950 "negative regulation of mitotic
recombination" evidence=ISS] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 GO:GO:0005634 GO:GO:0046872
GO:GO:0003676 EMBL:CM000070 SUPFAM:SSF53098 GO:GO:0008408
GenomeReviews:CM000070_GR GO:GO:0045950 eggNOG:NOG266861
OrthoDB:EOG473N7C RefSeq:XP_001358549.2 ProteinModelPortal:Q299L3
GeneID:4801455 KEGG:dpo:Dpse_GA20513 FlyBase:FBgn0080507
InParanoid:Q299L3 Uniprot:Q299L3
Length = 356
Score = 216 (81.1 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 56/199 (28%), Positives = 102/199 (51%)
Query: 87 KYPAMRFGGQILYSRTSTEVEMAAIELRRILEANKSEAGQVVVGFDIEWKPTFRKGVLPR 146
K P +++ G I Y + ++ +A ++ + ++ +++ V + FD+EW +F+ G P
Sbjct: 121 KLPFIKYRGAIKYFTENQDIAASADDVMQWVD-KQTDVDVVPMAFDMEWPFSFQTG--PG 177
Query: 147 KAAVMQICGDSNHCYVMQIIH-SGIPPSLQLLLEDSTILKVGVGIGSDAGKVYRDY-NVS 204
K++V+QIC D CYV Q+ + +P +L L+ + GV I +D K+ RD+ VS
Sbjct: 178 KSSVIQICVDEKCCYVYQLTNLKKLPAALVALINHPKVRLHGVNIKADFRKLQRDFPEVS 237
Query: 205 VKA----SEDLSYLAKHKIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQ 260
A DL ++I +W L L + K + K ++R+ W L ++Q
Sbjct: 238 ADALIEKCVDLGVWC-NEICETGGRWSLERLANFIAKKAMDKSKKVRMSKWHVIPLDENQ 296
Query: 261 LLYAATDAFASWHLYQVLK 279
L+YAA D + +Y+ L+
Sbjct: 297 LMYAAIDVYIGQVIYRDLE 315
>UNIPROTKB|B4N9D3 [details] [associations]
symbol:WRNexo "Werner Syndrome-like exonuclease"
species:7260 "Drosophila willistoni" [GO:0005634 "nucleus"
evidence=ISS] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISS] [GO:0045950 "negative regulation of mitotic
recombination" evidence=ISS] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 GO:GO:0005634 GO:GO:0046872
GO:GO:0003676 SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0045950
EMBL:CH964232 eggNOG:NOG266861 OrthoDB:EOG473N7C
RefSeq:XP_002069580.1 ProteinModelPortal:B4N9D3 STRING:B4N9D3
GeneID:6648207 KEGG:dwi:Dwil_GK11496 FlyBase:FBgn0213507
InParanoid:B4N9D3 Uniprot:B4N9D3
Length = 356
Score = 213 (80.0 bits), Expect = 4.0e-17, P = 4.0e-17
Identities = 59/206 (28%), Positives = 104/206 (50%)
Query: 87 KYPAMRFGGQILYSRTSTEVEMAAIELRRILEANKSEAGQVVVGFDIEWKPTFRKGVLPR 146
K P +++ G I Y + E+ +A ++ + ++ ++ V + FD+EW +F+ G P
Sbjct: 121 KLPFIKYKGAIKYYTENHEIAASADDVIQWID-KQTTLDVVPMAFDMEWPFSFQTG--PG 177
Query: 147 KAAVMQICGDSNHCYVMQIIH-SGIPPSLQLLLEDSTILKVGVGIGSDAGKVYRDY-NVS 204
K++V+Q+C D CYV Q+ +P +L LL + GV I +D K+ RD+ VS
Sbjct: 178 KSSVIQVCVDERCCYVYQLSKLKKLPAALVALLNHPKVRLHGVNIKADFRKLQRDFPEVS 237
Query: 205 ----VKASEDLSYLAKHKIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQ 260
++ DL ++I +W L L + K + K ++R+ W L ++Q
Sbjct: 238 ADPLIEKCVDLGVWC-NEICETGGRWSLERLANFIAKKAMDKSKKVRMSKWHVIPLDENQ 296
Query: 261 LLYAATDAFASWHLYQVLKSLPEPVK 286
L+YAA D + +Y+ L+ E VK
Sbjct: 297 LMYAAIDVYIGQVIYRDLEQR-EKVK 321
>UNIPROTKB|E1BEQ0 [details] [associations]
symbol:EXD2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008408 "3'-5' exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 GO:GO:0003676 GO:GO:0005622
SUPFAM:SSF53098 GO:GO:0008408 CTD:55218 OMA:QVIYAAR
GeneTree:ENSGT00390000014318 EMBL:DAAA02029492 IPI:IPI00714556
RefSeq:XP_002691029.1 RefSeq:XP_587937.2 ProteinModelPortal:E1BEQ0
Ensembl:ENSBTAT00000013255 GeneID:539532 KEGG:bta:539532
NextBio:20878052 Uniprot:E1BEQ0
Length = 628
Score = 208 (78.3 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 68/201 (33%), Positives = 104/201 (51%)
Query: 89 PAMRFGGQILYSRTSTEVEMAAIELRRILEANKSEAGQV-VVGFDIEWKPTFRKGVLPRK 147
P + +IL ++ T + A E +I + +SE V+G D EW + K P
Sbjct: 73 PRASWEERILGAKVMTVSQEA--EWDQIEPSLRSEIEDFPVLGIDCEWVNSEGKAS-P-- 127
Query: 148 AAVMQICGDSNHCYVMQI---IHSG--IPPSLQLLLEDSTILKVGVGIGSDAGKVYRDYN 202
+++Q+ S C ++++ I G +P +L +L D TILKVGVG DA K+ +DY
Sbjct: 128 LSLLQMASPSGFCVLVRLPKLICGGKTLPKTLLDILADGTILKVGVGCSEDASKLLQDYG 187
Query: 203 VSVKASEDLSYLAKHKIGGD-SQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQL 261
+ VK DL YLA + S L SL+E ++ L K +R NW+A+ L++DQ+
Sbjct: 188 LVVKGCLDLRYLAMRQRNNLLSNGLSLKSLSETVLNFPLDKSLLLRCSNWDAENLTEDQV 247
Query: 262 LYAATDAFASWHLYQVLKSLP 282
+YAA DA S L+ L P
Sbjct: 248 IYAARDAQISVALFLHLLGYP 268
>TIGR_CMR|SO_1153 [details] [associations]
symbol:SO_1153 "exonuclease, putative" species:211586
"Shewanella oneidensis MR-1" [GO:0005622 "intracellular"
evidence=ISS] [GO:0006308 "DNA catabolic process" evidence=ISS]
[GO:0008408 "3'-5' exonuclease activity" evidence=ISS]
InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612 SMART:SM00474
GO:GO:0003676 GO:GO:0005622 EMBL:AE014299 GenomeReviews:AE014299_GR
SUPFAM:SSF53098 GO:GO:0008408 RefSeq:NP_716778.2
ProteinModelPortal:Q8EHR4 GeneID:1168982 KEGG:son:SO_1153
PATRIC:23521944 HOGENOM:HOG000288499 OMA:KEMGTRQ
ProtClustDB:CLSK906115 Uniprot:Q8EHR4
Length = 291
Score = 201 (75.8 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 59/184 (32%), Positives = 95/184 (51%)
Query: 100 SRTSTEVEMAAIELRRILEANKSEAGQVVVGFDIEWKPTFRKGVLPRKAAVMQICGDSNH 159
S S VE+ E + A + + + V+GFD E + +F V + V D+
Sbjct: 84 SLESRHVELVTPEY--LATALQQLSRESVLGFDTETRASFEPSVQHPLSLVQLATADT-- 139
Query: 160 CYVMQIIHSGIP-PSLQLLLEDSTILKVGVGIGSDAGKVYRDYNVSVKASEDLSYLAKHK 218
CY+ Q G L+ LLE+ ILKVG+G+ D + RD+N+ V DL++ A +
Sbjct: 140 CYLFQQAVLGDAFAQLKPLLENEQILKVGIGLRGDGQALKRDWNILVSPRLDLNW-AMAQ 198
Query: 219 IGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAATDAFASWHLY-QV 277
+G ++ G L +L+ + + KP +I L NW+ LS Q+ YAA DA A+ H + Q+
Sbjct: 199 LGA-GKEMGTRQLVAVLLHQRIDKPKKITLSNWQQVPLSPAQIQYAALDALAANHCFWQL 257
Query: 278 LKSL 281
++ L
Sbjct: 258 IEKL 261
>UNIPROTKB|E1BXG2 [details] [associations]
symbol:EXD2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008408 "3'-5'
exonuclease activity" evidence=IEA] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 GO:GO:0003676 GO:GO:0005622
SUPFAM:SSF53098 GO:GO:0008408 CTD:55218 OMA:QVIYAAR
GeneTree:ENSGT00390000014318 EMBL:AADN02003163 IPI:IPI00593059
RefSeq:NP_001186629.1 UniGene:Gga.9546 ProteinModelPortal:E1BXG2
Ensembl:ENSGALT00000015388 GeneID:423264 KEGG:gga:423264
NextBio:20825760 Uniprot:E1BXG2
Length = 621
Score = 206 (77.6 bits), Expect = 4.5e-15, P = 4.5e-15
Identities = 61/176 (34%), Positives = 90/176 (51%)
Query: 128 VVGFDIEWKPTFRKGVLPRKAAVMQICGDSNHCYVMQI---IHSG--IPPSLQLLLEDST 182
V+G D EW K +++Q+ S C ++++ + SG +P +L ++ D
Sbjct: 106 VLGMDCEWVSVEGKA---NPVSLLQMASASGLCVLVRLPRLVASGQPVPKTLLDIMADDA 162
Query: 183 ILKVGVGIGSDAGKVYRDYNVSVKASEDLSYLAKHKIGGDSQKW-GLASLTEMLVCKELK 241
+LKVGVG DA K+ +DY++ VK S DL YLA + L SL E ++ L
Sbjct: 163 VLKVGVGCWEDACKLLQDYSLPVKGSVDLRYLAMRQRKDLLHNCLSLKSLAEKVLNCPLD 222
Query: 242 KPNRIRLGNWEADVLSKDQLLYAATDAFASWHLYQVLKSLPEPVKDATDQGNQRCS 297
K +R NWEA+ L++DQ+LYAA DA S L+ L L AT +G S
Sbjct: 223 KSPHMRCSNWEAEELTQDQVLYAARDAQVSVALF--LHLLGFACLPATSKGENSVS 276
>RGD|1311087 [details] [associations]
symbol:Exd2 "exonuclease 3'-5' domain containing 2"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0008408 "3'-5' exonuclease activity" evidence=IEA]
InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612 SMART:SM00474
RGD:1311087 GO:GO:0003676 GO:GO:0005622 SUPFAM:SSF53098
GO:GO:0008408 EMBL:CH473982 CTD:55218 eggNOG:NOG68878
HOGENOM:HOG000046597 OMA:QVIYAAR OrthoDB:EOG4GTKD1
GeneTree:ENSGT00390000014318 EMBL:BC166432 IPI:IPI00365636
RefSeq:NP_001102185.1 UniGene:Rn.102 STRING:B2GUW4
Ensembl:ENSRNOT00000033378 GeneID:362759 KEGG:rno:362759
UCSC:RGD:1311087 HOVERGEN:HBG051023 NextBio:681137
Genevestigator:B2GUW4 Uniprot:B2GUW4
Length = 648
Score = 206 (77.6 bits), Expect = 4.8e-15, P = 4.8e-15
Identities = 71/205 (34%), Positives = 103/205 (50%)
Query: 86 LKYPAMRFGGQILYSRTSTEVEMAAIELRRILEANKSEAGQV-VVGFDIEWKPTFRKGVL 144
L+ P + +IL + T + A E +I K E V+G D EW K
Sbjct: 90 LRTPRASWEERILQAEVVTVSQEA--EWNQIQPFLKRELEDFPVLGIDCEWVNLEGKAS- 146
Query: 145 PRKAAVMQICGDSNHCYVMQI---IHSG--IPPSLQLLLEDSTILKVGVGIGSDAGKVYR 199
P +++Q+ S C ++++ I+ G +P +L +L D TILKVGVG DA K+ +
Sbjct: 147 P--LSLLQMASPSGFCALVRLPRLIYGGKTLPRTLLDILADGTILKVGVGCSEDANKLLQ 204
Query: 200 DYNVSVKASEDLSYLAKHKIGGDSQKWGLA--SLTEMLVCKELKKPNRIRLGNWEADVLS 257
DY + V+ DL YLA K G GL+ SL E L+ L K +R NW+A+ L+
Sbjct: 205 DYGLIVRGCLDLRYLAM-KQGNSVLCNGLSLKSLAETLLNFPLDKSLLLRCSNWDAENLT 263
Query: 258 KDQLLYAATDAFASWHLYQVLKSLP 282
+DQ+ YAA DA S L+ L P
Sbjct: 264 EDQVTYAARDAQISVALFLHLLGYP 288
>UNIPROTKB|J9NWB3 [details] [associations]
symbol:EXD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 SMART:SM00474 GO:GO:0003676
GO:GO:0005622 SUPFAM:SSF53098 GO:GO:0008408
GeneTree:ENSGT00390000014318 EMBL:AAEX03005807
Ensembl:ENSCAFT00000048173 Uniprot:J9NWB3
Length = 577
Score = 200 (75.5 bits), Expect = 8.2e-15, Sum P(2) = 8.2e-15
Identities = 62/184 (33%), Positives = 91/184 (49%)
Query: 128 VVGFDIEWKPTFRKGVLPRKAAVMQICGDSNHCYVMQI---IHSG--IPPSLQLLLEDST 182
V+G D EW + + P +++Q+ S C ++++ I G +P +L +L D T
Sbjct: 109 VLGIDCEWVNSEGRAS-P--LSLLQMASPSGFCVLVRLPKLICGGKTLPKTLLDILADGT 165
Query: 183 ILKVGVGIGSDAGKVYRDYNVSVKASEDLSYLA-KHKIGGDSQKWGLASLTEMLVCKELK 241
ILKVGVG DA K+ +DY + VK DL YLA + + L SL E ++ L
Sbjct: 166 ILKVGVGCSEDASKLLQDYGLVVKGCLDLRYLAVRQRNNLLCNGLSLKSLAETVLNFPLD 225
Query: 242 KPNRIRLGNWEADVLSKDQLLYAATDAFASWHLYQVLKSLPEPVKDATDQGNQRCS-RLD 300
K +R NW+A+ L++DQ++YAA DA S L+ L P D N R
Sbjct: 226 KSLLLRCSNWDAENLTEDQVIYAARDAQISVALFLHLLGYPFSRNSTLDGYNDHIGWRKV 285
Query: 301 LHNC 304
L C
Sbjct: 286 LEKC 289
Score = 40 (19.1 bits), Expect = 8.2e-15, Sum P(2) = 8.2e-15
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 5 SVETEGDDDEPITEQELE 22
S E E D EP+ ELE
Sbjct: 88 SQEAEWDQIEPLLRSELE 105
>UNIPROTKB|E2QXX4 [details] [associations]
symbol:EXD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 SMART:SM00474 GO:GO:0003676
GO:GO:0005622 SUPFAM:SSF53098 GO:GO:0008408 CTD:55218 OMA:QVIYAAR
GeneTree:ENSGT00390000014318 EMBL:AAEX03005807 RefSeq:XP_547872.2
Ensembl:ENSCAFT00000026226 GeneID:490750 KEGG:cfa:490750
Uniprot:E2QXX4
Length = 623
Score = 200 (75.5 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 62/184 (33%), Positives = 91/184 (49%)
Query: 128 VVGFDIEWKPTFRKGVLPRKAAVMQICGDSNHCYVMQI---IHSG--IPPSLQLLLEDST 182
V+G D EW + + P +++Q+ S C ++++ I G +P +L +L D T
Sbjct: 106 VLGIDCEWVNSEGRAS-P--LSLLQMASPSGFCVLVRLPKLICGGKTLPKTLLDILADGT 162
Query: 183 ILKVGVGIGSDAGKVYRDYNVSVKASEDLSYLA-KHKIGGDSQKWGLASLTEMLVCKELK 241
ILKVGVG DA K+ +DY + VK DL YLA + + L SL E ++ L
Sbjct: 163 ILKVGVGCSEDASKLLQDYGLVVKGCLDLRYLAVRQRNNLLCNGLSLKSLAETVLNFPLD 222
Query: 242 KPNRIRLGNWEADVLSKDQLLYAATDAFASWHLYQVLKSLPEPVKDATDQGNQRCS-RLD 300
K +R NW+A+ L++DQ++YAA DA S L+ L P D N R
Sbjct: 223 KSLLLRCSNWDAENLTEDQVIYAARDAQISVALFLHLLGYPFSRNSTLDGYNDHIGWRKV 282
Query: 301 LHNC 304
L C
Sbjct: 283 LEKC 286
Score = 40 (19.1 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 5 SVETEGDDDEPITEQELE 22
S E E D EP+ ELE
Sbjct: 85 SQEAEWDQIEPLLRSELE 102
>FB|FBgn0037901 [details] [associations]
symbol:CG6744 species:7227 "Drosophila melanogaster"
[GO:0005622 "intracellular" evidence=IEA] [GO:0008408 "3'-5'
exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016444 "somatic cell DNA recombination"
evidence=IMP] InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612
SMART:SM00474 EMBL:AE014297 GO:GO:0003676 GO:GO:0005622
SUPFAM:SSF53098 GO:GO:0008408 eggNOG:NOG68878 OMA:QVIYAAR
GO:GO:0016444 EMBL:AY089433 RefSeq:NP_001247048.1
RefSeq:NP_650075.1 UniGene:Dm.5018 SMR:Q9VGN7 DIP:DIP-23707N
IntAct:Q9VGN7 MINT:MINT-965203 EnsemblMetazoa:FBtr0082402
EnsemblMetazoa:FBtr0308211 GeneID:41374 KEGG:dme:Dmel_CG6744
UCSC:CG6744-RA FlyBase:FBgn0037901 GeneTree:ENSGT00390000014318
InParanoid:Q9VGN7 OrthoDB:EOG4VDNDR GenomeRNAi:41374 NextBio:823540
Uniprot:Q9VGN7
Length = 583
Score = 203 (76.5 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 55/152 (36%), Positives = 78/152 (51%)
Query: 128 VVGFDIEWKPTFRKGVLPRKAAVMQICGDSNHCYVMQIIH-SGIPPSLQLLLEDSTILKV 186
V+GFD EW G R A++Q+ C + ++ H IP L+ LLED +++KV
Sbjct: 79 VLGFDCEW---ITVGGSRRPVALLQLSSHRGLCALFRLCHMKQIPQDLRELLEDDSVIKV 135
Query: 187 GVGIGSDAGKVYRDYNVSVKASEDLSYLAKHKIGGDSQKWGLASLTEMLVCKELKKPNRI 246
GV DA K+ DY V V ++ DL +L + G + GL L++ + L K R+
Sbjct: 136 GVAPQEDAMKLSHDYGVGVASTLDLRFLCV--MAGHKPE-GLGKLSKTHLNYTLDKHWRL 192
Query: 247 RLGNWEADVLSKDQLLYAATDAFASWHLYQVL 278
NWEA L QL YAA DA + +YQ L
Sbjct: 193 ACSNWEAKTLEPKQLDYAANDALMAVAIYQKL 224
>UNIPROTKB|Q9NVH0 [details] [associations]
symbol:EXD2 "Exonuclease 3'-5' domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008408
"3'-5' exonuclease activity" evidence=IEA] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 SMART:SM00474 EMBL:CH471061
GO:GO:0003676 GO:GO:0005622 GO:GO:0090305 SUPFAM:SSF53098
GO:GO:0008408 EMBL:AK001600 EMBL:AK295601 EMBL:AL834434
EMBL:BX647767 EMBL:AL359317 EMBL:BC001962 IPI:IPI00465113
IPI:IPI00915852 RefSeq:NP_001180289.1 RefSeq:NP_001180290.1
RefSeq:NP_001180291.1 RefSeq:NP_001180292.1 RefSeq:NP_060669.1
UniGene:Hs.533878 ProteinModelPortal:Q9NVH0 STRING:Q9NVH0
PhosphoSite:Q9NVH0 DMDM:37999798 PaxDb:Q9NVH0 PRIDE:Q9NVH0
DNASU:55218 Ensembl:ENST00000312994 Ensembl:ENST00000409014
Ensembl:ENST00000409018 Ensembl:ENST00000409242
Ensembl:ENST00000409675 Ensembl:ENST00000409949
Ensembl:ENST00000449989 GeneID:55218 KEGG:hsa:55218 UCSC:uc001xkt.3
CTD:55218 GeneCards:GC14P069658 HGNC:HGNC:20217 HPA:HPA002906
HPA:HPA005848 neXtProt:NX_Q9NVH0 PharmGKB:PA164719421
eggNOG:NOG68878 HOGENOM:HOG000046597 InParanoid:Q9NVH0 OMA:QVIYAAR
OrthoDB:EOG4GTKD1 ChiTaRS:EXD2 GenomeRNAi:55218 NextBio:59188
ArrayExpress:Q9NVH0 Bgee:Q9NVH0 CleanEx:HS_EXDL2
Genevestigator:Q9NVH0 GermOnline:ENSG00000081177 Uniprot:Q9NVH0
Length = 621
Score = 197 (74.4 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 61/184 (33%), Positives = 91/184 (49%)
Query: 128 VVGFDIEWKPTFRKGVLPRKAAVMQICGDSNHCYVMQI---IHSG--IPPSLQLLLEDST 182
V+G D EW K P +++Q+ S C ++++ I G +P +L +L D T
Sbjct: 104 VLGIDCEWVNLEGKAS-P--LSLLQMASPSGLCVLVRLPKLICGGKTLPRTLLDILADGT 160
Query: 183 ILKVGVGIGSDAGKVYRDYNVSVKASEDLSYLAKHKIGGD-SQKWGLASLTEMLVCKELK 241
ILKVGVG DA K+ +DY + V+ DL YLA + L SL E ++ L
Sbjct: 161 ILKVGVGCSEDASKLLQDYGLVVRGCLDLRYLAMRQRNNLLCNGLSLKSLAETVLNFPLD 220
Query: 242 KPNRIRLGNWEADVLSKDQLLYAATDAFASWHLYQVLKSLPEPVKDATDQGNQRCS-RLD 300
K +R NW+A+ L++DQ++YAA DA S L+ L P ++ + S R
Sbjct: 221 KSLLLRCSNWDAETLTEDQVIYAARDAQISVALFLHLLGYPFSRNSPGEKNDDHSSWRKV 280
Query: 301 LHNC 304
L C
Sbjct: 281 LEKC 284
Score = 40 (19.1 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 5 SVETEGDDDEPITEQELE 22
S E E D EP+ ELE
Sbjct: 83 SQEAEWDQIEPLLRSELE 100
>ZFIN|ZDB-GENE-030131-6387 [details] [associations]
symbol:exd2 "exonuclease 3'-5' domain containing
2" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612 SMART:SM00474
ZFIN:ZDB-GENE-030131-6387 GO:GO:0003676 GO:GO:0005622
SUPFAM:SSF53098 GO:GO:0008408 OMA:QVIYAAR
GeneTree:ENSGT00390000014318 EMBL:CU302376 IPI:IPI00886631
Ensembl:ENSDART00000111389 ArrayExpress:F1QBW6 Bgee:F1QBW6
Uniprot:F1QBW6
Length = 617
Score = 200 (75.5 bits), Expect = 5.9e-14, P = 5.9e-14
Identities = 53/155 (34%), Positives = 85/155 (54%)
Query: 128 VVGFDIEWKPTFRKGVLPRKAAV--MQICGDSNHCYVMQII---HSGIPPSLQLLLEDST 182
V+G D EW R V R +AV +Q+ + C +++++ ++ +P SL +LL D
Sbjct: 105 VLGLDCEWVKRVRVSVKGRVSAVSLLQLSSFTGRCVLVRLLAFQNAQLPKSLIVLLRDQR 164
Query: 183 ILKVGVGIGSDAGKVYRDYNVSVKASEDLSYLA--KHKIGGDSQKWGLASLTEMLVCKEL 240
+LKVGVG D ++ +D+ +++ + DL YLA + K + L SL E L+ L
Sbjct: 165 VLKVGVGCYEDGKRLAQDHGLTLSCTVDLRYLALRRSKQAVLTNGLSLKSLAEDLLNVTL 224
Query: 241 KKPNRIRLGNWEADVLSKDQLLYAATDAFASWHLY 275
K +R +WEA+ LS +Q+ YAA DA S L+
Sbjct: 225 DKSVELRCSDWEAEELSPEQITYAARDAQISIALF 259
>DICTYBASE|DDB_G0278593 [details] [associations]
symbol:exdl2B "3'-5' exonuclease domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008408
"3'-5' exonuclease activity" evidence=IEA] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0004527 "exonuclease activity" evidence=IEA]
InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612 SMART:SM00474
dictyBase:DDB_G0278593 GenomeReviews:CM000152_GR EMBL:AAFI02000023
GO:GO:0003676 GO:GO:0005622 SUPFAM:SSF53098 GO:GO:0008408
eggNOG:NOG68878 ProtClustDB:CLSZ2430753 RefSeq:XP_642107.2
ProteinModelPortal:Q54YU5 EnsemblProtists:DDB0238341 GeneID:8621318
KEGG:ddi:DDB_G0278593 OMA:ASKENIC Uniprot:Q54YU5
Length = 686
Score = 191 (72.3 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 52/163 (31%), Positives = 86/163 (52%)
Query: 128 VVGFDIEW-KPT--F--------RKGVLPRKAAVMQICGDSNHCYVMQIIH-SGIPPSLQ 175
++GFD EW P F K K A++Q+ N +++Q+ IP SL+
Sbjct: 163 IIGFDAEWGNPNSIFDDKIDDKTTKTHYNHKVALIQL-SSKNETFLIQVSQMEKIPISLE 221
Query: 176 LLLEDSTILKVGVGIGSDAGKVYRDYNVSVKASEDLSYLAKHKIGGDSQKWGLASLTEML 235
+L D ++KVGV + DA +++ ++V K DL +A+ + + GLASL +
Sbjct: 222 QILTDPRLIKVGVAVSQDAATIFQTFSVVTKGYVDLVPIARLT---NYEGNGLASLALNV 278
Query: 236 VCKELKKPNRIRLGNWEADVLSKDQLLYAATDAFASWHLYQVL 278
+ L K N+IR G+WE LS DQ+ YAA DA+ +++++
Sbjct: 279 MNVTLNKSNKIRCGHWENKKLSNDQIHYAAADAWVGREIFEIM 321
>DICTYBASE|DDB_G0278079 [details] [associations]
symbol:exdl2A "3'-5' exonuclease domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008408
"3'-5' exonuclease activity" evidence=IEA] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0004527
"exonuclease activity" evidence=IEA] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 SMART:SM00474
dictyBase:DDB_G0278079 GenomeReviews:CM000152_GR EMBL:AAFI02000023
GO:GO:0003676 GO:GO:0005622 SUPFAM:SSF53098 GO:GO:0008408
eggNOG:NOG68878 RefSeq:XP_642108.1 ProteinModelPortal:Q54YU4
EnsemblProtists:DDB0238340 GeneID:8621319 KEGG:ddi:DDB_G0278079
OMA:RCSHWEN ProtClustDB:CLSZ2430753 Uniprot:Q54YU4
Length = 718
Score = 186 (70.5 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 56/196 (28%), Positives = 94/196 (47%)
Query: 94 GGQILYSRTSTEVEMAAIELRRILEANKSEAGQVVVGFDIEWK----------PTFRKGV 143
G IL + T E A+ E N ++ ++GFD EW T
Sbjct: 162 GADILNQQQIT-TESNALLFPNCSEIN-NDGLDFIIGFDAEWSNFNSIDDSTTTTTTTSK 219
Query: 144 LPRKAAVMQICGDSNHCYVMQIIH-SGIPPSLQLLLEDSTILKVGVGIGSDAGKVYRDYN 202
K A++Q+ N +++Q+ IP SL+ +L D ++KVGV + DA +++ ++
Sbjct: 220 YNHKVALIQL-SSKNETFLIQVSQMEKIPTSLEQILTDPRLIKVGVAVSQDAATIFQTFS 278
Query: 203 VSVKASEDLSYLAKHKIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLL 262
V K DL +A+ + + GLASL ++ L K N IR +WE L+ DQ+
Sbjct: 279 VVTKGCVDLVPIARLT---NYEGNGLASLALNVMNVTLDKSNLIRCSHWENKDLTNDQIH 335
Query: 263 YAATDAFASWHLYQVL 278
YAA DA+ +++++
Sbjct: 336 YAAADAWVGREIFEIM 351
>MGI|MGI:1922485 [details] [associations]
symbol:Exd2 "exonuclease 3'-5' domain containing 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008408 "3'-5' exonuclease activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 MGI:MGI:1922485 GO:GO:0003676
GO:GO:0005622 GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0008408
eggNOG:NOG68878 OrthoDB:EOG4GTKD1 EMBL:BC018508 IPI:IPI00124568
UniGene:Mm.206631 ProteinModelPortal:Q8VEG4 SMR:Q8VEG4
STRING:Q8VEG4 PhosphoSite:Q8VEG4 PaxDb:Q8VEG4 PRIDE:Q8VEG4
InParanoid:Q8VEG4 Bgee:Q8VEG4 CleanEx:MM_EXDL2
Genevestigator:Q8VEG4 GermOnline:ENSMUSG00000032705 Uniprot:Q8VEG4
Length = 496
Score = 181 (68.8 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 53/138 (38%), Positives = 77/138 (55%)
Query: 164 QIIHSG--IPPSLQLLLEDSTILKVGVGIGSDAGKVYRDYNVSVKASEDLSYLAKHKIGG 221
++I+ G +P +L +L D ILKVGVG DA K+ +DY + V+ DL YLA K G
Sbjct: 15 RLIYGGRTLPRTLLDILADGAILKVGVGCSEDANKLLQDYGLIVRGCLDLRYLAM-KQGN 73
Query: 222 DSQKWGLA--SLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAATDAFASWHLYQVLK 279
+ GL+ SL E ++ L K +R NW+A+ L++DQ+ YAA DA S L+ L
Sbjct: 74 NILCNGLSLKSLAETILNFPLDKSLLLRCSNWDAENLTEDQVTYAARDAQISVALFLHLL 133
Query: 280 SLP----EPVKDATDQGN 293
P +++TDQ N
Sbjct: 134 GYPFSRDSYEEESTDQIN 151
>UNIPROTKB|C9JLF4 [details] [associations]
symbol:EXD2 "Exonuclease 3'-5' domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008408
"3'-5' exonuclease activity" evidence=IEA] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 GO:GO:0003676 GO:GO:0005622
SUPFAM:SSF53098 GO:GO:0008408 EMBL:AL359317 HGNC:HGNC:20217
ChiTaRS:EXD2 IPI:IPI00916247 ProteinModelPortal:C9JLF4 SMR:C9JLF4
STRING:C9JLF4 Ensembl:ENST00000413191 HOGENOM:HOG000122146
ArrayExpress:C9JLF4 Bgee:C9JLF4 Uniprot:C9JLF4
Length = 114
Score = 147 (56.8 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 36/92 (39%), Positives = 51/92 (55%)
Query: 170 IPPSLQLLLEDSTILKVGVGIGSDAGKVYRDYNVSVKASEDLSYLAKHKIGGD-SQKWGL 228
+P +L +L D TILKVGVG DA K+ +DY + V+ DL YLA + L
Sbjct: 23 LPRTLLDILADGTILKVGVGCSEDASKLLQDYGLVVRGCLDLRYLAMRQRNNLLCNGLSL 82
Query: 229 ASLTEMLVCKELKKPNRIRLGNWEADVLSKDQ 260
SL E ++ L K +R NW+A+ L++DQ
Sbjct: 83 KSLAETVLNFPLDKSLLLRCSNWDAETLTEDQ 114
>TAIR|locus:2053519 [details] [associations]
symbol:AT2G36110 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA;ISS] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 EMBL:CP002685 GO:GO:0016740
GO:GO:0003676 GO:GO:0005622 SUPFAM:SSF53098 GO:GO:0008408
EMBL:AC007135 EMBL:AY649245 IPI:IPI00518056 PIR:A84777
RefSeq:NP_181155.1 UniGene:At.37587 ProteinModelPortal:Q9SIH3
SMR:Q9SIH3 PRIDE:Q9SIH3 EnsemblPlants:AT2G36110.1 GeneID:818184
KEGG:ath:AT2G36110 TAIR:At2g36110 InParanoid:Q9SIH3 OMA:FRHQLEI
PhylomeDB:Q9SIH3 ProtClustDB:CLSN2913262 Genevestigator:Q9SIH3
Uniprot:Q9SIH3
Length = 239
Score = 158 (60.7 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 54/181 (29%), Positives = 86/181 (47%)
Query: 93 FGGQILYSRTSTEVEMAA-IELRRILEANKSEAGQVVVGFDIEWKPTFRKGVLPRKAAVM 151
FG +++ + T T + I R +S + +VVG D++W P G P ++
Sbjct: 22 FGERLIVTVTHTTSTIRRWIHSIRFFSRLRS-SHPLVVGLDVQWTPG---GSDP-PPDIL 76
Query: 152 QICGDSNHCYVMQIIH-SGIPPSLQLLLEDSTILKVGVGIGSDAGKVYR-DYNVSVKASE 209
Q+C N C ++Q+ H IP L+ LED TI VGV D GK+ R + + +
Sbjct: 77 QLCV-GNRCLIIQLSHCKRIPEVLRSFLEDETITFVGVWNSQDQGKLERFRHQLEIWRLL 135
Query: 210 DLS-YLAKHKIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAATDA 268
D+ YL + +K + E L K ++K I + NW A LS DQ++ A+ D
Sbjct: 136 DIRHYLPTRLLNSSFEK----IVEECLGYKGVRKDKEICMSNWGARSLSHDQIVQASDDV 191
Query: 269 F 269
+
Sbjct: 192 Y 192
>GENEDB_PFALCIPARUM|PFA0290w [details] [associations]
symbol:PFA0290w "DNA binding protein, putative"
species:5833 "Plasmodium falciparum" [GO:0003677 "DNA binding"
evidence=ISS] InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612
SMART:SM00474 GO:GO:0003677 GO:GO:0005622 SUPFAM:SSF53098
GO:GO:0008408 EMBL:AL844501 RefSeq:XP_001350990.2
ProteinModelPortal:Q8I282 EnsemblProtists:PFA0290w:mRNA
GeneID:813195 KEGG:pfa:PFA_0290w HOGENOM:HOG000283827
ProtClustDB:CLSZ2432236 Uniprot:Q8I282
Length = 448
Score = 134 (52.2 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 43/129 (33%), Positives = 72/129 (55%)
Query: 150 VMQICGDSNHCYVMQI--IHSGIPPSLQLLLEDSTILKVGVGIGSDAGKVYRDYNVSVKA 207
++Q+C S+ C+V I ++ IP S++ +LE+ I+KV I ++ ++ N+ +K
Sbjct: 142 LIQLCS-SDLCFVFNIHKLNGHIPISVKNILENEEIIKVAHDIKNEKD-MFLSNNIQIKN 199
Query: 208 SEDL-SYLAKHKIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAAT 266
DL +Y + I S L SL ++ + K L K + RL NW L ++Q+LYAA
Sbjct: 200 VFDLYNYAIDNFIYPPS----LQSLVKIYLNKFLDK--KFRLSNWLNYSLLQEQILYAAV 253
Query: 267 DAFASWHLY 275
DA+AS +Y
Sbjct: 254 DAYASRQIY 262
>UNIPROTKB|Q8I282 [details] [associations]
symbol:PFA_0290w "DNA binding protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003677 "DNA binding"
evidence=ISS] InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612
SMART:SM00474 GO:GO:0003677 GO:GO:0005622 SUPFAM:SSF53098
GO:GO:0008408 EMBL:AL844501 RefSeq:XP_001350990.2
ProteinModelPortal:Q8I282 EnsemblProtists:PFA0290w:mRNA
GeneID:813195 KEGG:pfa:PFA_0290w HOGENOM:HOG000283827
ProtClustDB:CLSZ2432236 Uniprot:Q8I282
Length = 448
Score = 134 (52.2 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 43/129 (33%), Positives = 72/129 (55%)
Query: 150 VMQICGDSNHCYVMQI--IHSGIPPSLQLLLEDSTILKVGVGIGSDAGKVYRDYNVSVKA 207
++Q+C S+ C+V I ++ IP S++ +LE+ I+KV I ++ ++ N+ +K
Sbjct: 142 LIQLCS-SDLCFVFNIHKLNGHIPISVKNILENEEIIKVAHDIKNEKD-MFLSNNIQIKN 199
Query: 208 SEDL-SYLAKHKIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAAT 266
DL +Y + I S L SL ++ + K L K + RL NW L ++Q+LYAA
Sbjct: 200 VFDLYNYAIDNFIYPPS----LQSLVKIYLNKFLDK--KFRLSNWLNYSLLQEQILYAAV 253
Query: 267 DAFASWHLY 275
DA+AS +Y
Sbjct: 254 DAYASRQIY 262
>DICTYBASE|DDB_G0285657 [details] [associations]
symbol:DDB_G0285657 species:44689 "Dictyostelium
discoideum" [GO:0008408 "3'-5' exonuclease activity" evidence=IEA]
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612
dictyBase:DDB_G0285657 EMBL:AAFI02000079 GO:GO:0003676
GO:GO:0005622 SUPFAM:SSF53098 GO:GO:0008408 RefSeq:XP_638200.1
ProteinModelPortal:Q54MU3 EnsemblProtists:DDB0186642 GeneID:8625246
KEGG:ddi:DDB_G0285657 InParanoid:Q54MU3 OMA:NSCININ Uniprot:Q54MU3
Length = 419
Score = 130 (50.8 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 43/160 (26%), Positives = 71/160 (44%)
Query: 127 VVVGFDIEWKPTFRKGVLPRKAAVMQICGDSNHC--YVMQIIHSGIPPSLQL--LLEDST 182
+V+GFD+EW R +K + +N C + ++ H+G+ + +L LL+
Sbjct: 243 IVLGFDLEWSALERYTTKTKKETKTALITLTNGCETVLFRVCHTGLDENSELGKLLKSGV 302
Query: 183 ILKVGVGIGSDAGKVYRDYNVSVKASEDLSYLAKHKIGGDSQKWGLASLTEMLVCKELKK 242
I K G G G DA K+ +D+ V DL Y K I + + +T L +K+
Sbjct: 303 ITKTGFGAGKDANKICKDFGFEVDGIFDLKYTPK--ILALFKNRAVEYVTAGLFGVNIKR 360
Query: 243 PNRIRLGNW-EADVLSKDQLLYAATDAFASWHLYQVLKSL 281
+ + L W + L Q+ +A S Y +L SL
Sbjct: 361 NSTLILSAWGTSHQLKPRQIHSSALYTIYSLKTYFMLPSL 400
>TAIR|locus:2092482 [details] [associations]
symbol:AT3G12410 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612
SMART:SM00474 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003676
GO:GO:0005622 SUPFAM:SSF53098 EMBL:AP002047 GO:GO:0008408
EMBL:AC069474 HOGENOM:HOG000152188 ProtClustDB:CLSN2683821
EMBL:AK176143 IPI:IPI00544772 RefSeq:NP_187847.1 UniGene:At.50891
ProteinModelPortal:Q9LHG7 PRIDE:Q9LHG7 EnsemblPlants:AT3G12410.1
GeneID:820420 KEGG:ath:AT3G12410 TAIR:At3g12410 eggNOG:NOG253679
InParanoid:Q9LHG7 OMA:YNTHLEY PhylomeDB:Q9LHG7
Genevestigator:Q9LHG7 Uniprot:Q9LHG7
Length = 230
Score = 119 (46.9 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 49/212 (23%), Positives = 91/212 (42%)
Query: 83 NMRLKYPAMRFGGQILYSRTSTEVEMAAIELRRILEANKSEAGQVVVGFDIEWKP-TFRK 141
N L+Y FG + + + T + + + +R +L N+ + +VVG ++W P ++
Sbjct: 13 NTHLEYSVDFFGDEFIVTVT-WDSSVISRWIRNVLFNNRFSSHPLVVGVGVQWTPFSYYS 71
Query: 142 GVLPRK---------------AAVMQICGDSNHCYVMQIIHSG-IPPSLQLLLEDSTILK 185
P A ++Q+C N C ++Q+ + +P +L+ L D
Sbjct: 72 DPRPNNYYADPPPIRYYSDNPADILQLCV-GNRCLIIQLGYCDQVPNNLRSFLADPETTF 130
Query: 186 VGVGIGSDAGKVYRD-YNVSVKASEDLSYLAKHKIGGDSQKWGLASLTEMLVCKE--LKK 242
VGV G DAGK+ R + + + D+ G ++ + E + + +
Sbjct: 131 VGVWNGQDAGKLARCCHQLEIGELLDIRRYVTDSWGRSMRRSSFEEIVEECMGYQGVMLD 190
Query: 243 PNRIRLGNWEADVLSKDQLLYAATDAFASWHL 274
P I + +W A L DQ+L A+ DA+ L
Sbjct: 191 PE-ISMSDWTAYDLDLDQILQASLDAYVCHQL 221
>UNIPROTKB|Q8N9H8 [details] [associations]
symbol:EXD3 "Probable exonuclease mut-7 homolog"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008408
"3'-5' exonuclease activity" evidence=IEA] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 SMART:SM00474 GO:GO:0003676
GO:GO:0005622 GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0008408
EMBL:BX322799 UniGene:Hs.495553 GeneCards:GC09M140201
HGNC:HGNC:26023 ChiTaRS:EXD3 eggNOG:NOG241966 InterPro:IPR002782
Pfam:PF01927 EMBL:AB061798 EMBL:AK055004 EMBL:AK094438
EMBL:BC037355 EMBL:BC110879 IPI:IPI00413242 IPI:IPI00884892
IPI:IPI00884936 IPI:IPI00885207 RefSeq:NP_060290.3 HSSP:Q14191
ProteinModelPortal:Q8N9H8 SMR:Q8N9H8 STRING:Q8N9H8 DMDM:308153580
PeptideAtlas:Q2TAK4 PRIDE:Q8N9H8 Ensembl:ENST00000340951
Ensembl:ENST00000342129 Ensembl:ENST00000479452 GeneID:54932
KEGG:hsa:54932 UCSC:uc004cmp.2 UCSC:uc004cmr.3 UCSC:uc010ncf.1
CTD:54932 HPA:HPA047395 neXtProt:NX_Q8N9H8 PharmGKB:PA164719422
HOVERGEN:HBG108161 InParanoid:Q8N9H8 OMA:QENWADH OrthoDB:EOG4MPHPR
GenomeRNAi:54932 NextBio:58039 ArrayExpress:Q8N9H8 Bgee:Q8N9H8
Genevestigator:Q8N9H8 Uniprot:Q8N9H8
Length = 876
Score = 91 (37.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 31/104 (29%), Positives = 51/104 (49%)
Query: 128 VVGFDIEWKPTFRKGVLPRKAAVMQICGDSNHCYVMQIIHSGIPPSLQ----------LL 177
VVG D+EW P F G PR + ++Q+ + H +++ ++ PP+ Q L
Sbjct: 395 VVGVDVEWTPVFVAGGRPRPS-LLQVAVEG-HVFLLDVLALSQPPTGQGAQAFSRLVAQL 452
Query: 178 LEDSTILKVGVGIGSDAGKVYRDYNVSVKASEDLSYLAKHKIGG 221
L D +I K+G G+ D K+ S A L+++ K +GG
Sbjct: 453 LSDPSITKLGYGMVGDLQKL----GTSCPA---LAHVEKQILGG 489
Score = 78 (32.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 21/72 (29%), Positives = 35/72 (48%)
Query: 227 GLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAATDAFASWHLYQVLKSLPEPVK 286
GL+ L + ++ L K + L NW+ L ++Q++YAA DA+ ++Q L P
Sbjct: 517 GLSLLVQQVLGTALDKTQQ--LSNWDRRPLCEEQVIYAAADAYCLLEVHQALCREPARFH 574
Query: 287 DATDQGNQRCSR 298
+ D R R
Sbjct: 575 LSEDLAGSRRPR 586
>ZFIN|ZDB-GENE-091204-349 [details] [associations]
symbol:exd3 "exonuclease 3'-5' domain containing 3"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612 SMART:SM00474
ZFIN:ZDB-GENE-091204-349 GO:GO:0003676 GO:GO:0005622
SUPFAM:SSF53098 GO:GO:0008408 GeneTree:ENSGT00390000006843
InterPro:IPR002782 Pfam:PF01927 EMBL:BX005370 IPI:IPI00491719
Ensembl:ENSDART00000092011 Uniprot:E7EY45
Length = 861
Score = 90 (36.7 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 221 GDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAATDAFASWHLYQVLKS 280
G ++K GL+ L + ++ K L K + L NWE L QL YAA DA+ +Y +L
Sbjct: 512 GPAEK-GLSLLVQQVLGKPLNKSEQ--LSNWERRPLRTSQLRYAAADAYCLLDIYLILSR 568
Query: 281 LPE 283
P+
Sbjct: 569 DPK 571
Score = 74 (31.1 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 21/72 (29%), Positives = 37/72 (51%)
Query: 128 VVGFDIEWKPTFRKGVLPRKAAVMQICGDSNHCYVMQII------HSGIPPSLQLLLEDS 181
VVG D+EW+ F V ++ A++Q+ + +++ + HS ++ LL D
Sbjct: 394 VVGMDMEWRAGFGT-VSSQRVALIQLAVQ-DQVFLLDLCAHAISHHSTTVDFIRALLSDK 451
Query: 182 TILKVGVGIGSD 193
ILK+G G+ D
Sbjct: 452 KILKLGYGMSGD 463
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.133 0.390 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 304 284 0.00085 115 3 11 22 0.39 34
33 0.42 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 47
No. of states in DFA: 614 (65 KB)
Total size of DFA: 211 KB (2117 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.44u 0.16s 21.60t Elapsed: 00:00:01
Total cpu time: 21.44u 0.16s 21.60t Elapsed: 00:00:01
Start: Sat May 11 02:08:59 2013 End: Sat May 11 02:09:00 2013