BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022027
(304 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84LH3|WEX_ARATH Werner Syndrome-like exonuclease OS=Arabidopsis thaliana GN=WEX
PE=1 SV=1
Length = 288
Score = 304 bits (779), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 159/284 (55%), Positives = 199/284 (70%), Gaps = 17/284 (5%)
Query: 13 DEPITEQELEIVEAIEAAYELSITRKR--------QLSPPVHNNHTHRPMSITS---RRL 61
D+ TE+EL ++AIEA+Y S + Q + VH H P I + R+L
Sbjct: 8 DDAFTEEELLAIDAIEASYNFSRSSSSSSSAAPTVQATTSVHG-HEEDPNQIPNNIRRQL 66
Query: 62 PSSLVASPSSPSFSLSHCQGANMRLKYPAMRFGGQILYSRTSTEVEMAAIELRRILEANK 121
P S+ +S S F LS C+ N +PAMRFGG+ILYS+T+TEV+ A++L ++L+ +
Sbjct: 67 PRSITSSTSYKRFPLSRCRARN----FPAMRFGGRILYSKTATEVDKRAMQLIKVLDTKR 122
Query: 122 SEAGQVVVGFDIEWKPTFRKGVLPRKAAVMQICGDSNHCYVMQIIHSGIPPSLQLLLEDS 181
E+G VG DIEW+P+FRKGVLP K A +QIC DSN+C VM I HSGIP SLQ L+EDS
Sbjct: 123 DESGIAFVGLDIEWRPSFRKGVLPGKVATVQICVDSNYCDVMHIFHSGIPQSLQHLIEDS 182
Query: 182 TILKVGVGIGSDAGKVYRDYNVSVKASEDLSYLAKHKIGGDSQKWGLASLTEMLVCKELK 241
T++KVG+GI D+ K++ DY VS+K EDLS LA KIGGD +KWGLASLTE LVCKEL
Sbjct: 183 TLVKVGIGIDGDSVKLFHDYGVSIKDVEDLSDLANQKIGGD-KKWGLASLTETLVCKELL 241
Query: 242 KPNRIRLGNWEADVLSKDQLLYAATDAFASWHLYQVLKSLPEPV 285
KPNRIRLGNWE LSK QL YAATDA+ASWHLY+VLK LP+ V
Sbjct: 242 KPNRIRLGNWEFYPLSKQQLQYAATDAYASWHLYKVLKDLPDAV 285
>sp|O93530|WRN_XENLA Werner syndrome ATP-dependent helicase homolog OS=Xenopus laevis
GN=wrn PE=2 SV=1
Length = 1436
Score = 129 bits (324), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 123/230 (53%), Gaps = 16/230 (6%)
Query: 77 SHCQGANMRLKYPAMRFGGQILYSRTSTEVEMAAIELRR-ILEANKSEAGQVVVGFDIEW 135
S C+ + P M+F G I+YS S + + + ++R +LE + V+GFDIEW
Sbjct: 27 SFCKKNILEDNLPFMKFNGSIVYSYESNDCSLLSEDIRSSLLEED-------VLGFDIEW 79
Query: 136 KPTFRKGVLPRKAAVMQICGDSNHCYVMQII-HSGIPPSLQLLLEDSTILKVGVGIGSDA 194
P + KG K A++Q+C CY+ I +G P L+ LLED ++ KVGVGI D
Sbjct: 80 PPVYTKGKTG-KVALIQVCVSEKKCYLFHISPMAGFPKGLKRLLEDESVRKVGVGIEGDQ 138
Query: 195 GKVYRDYNVSVKASEDLSYLAKHKIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEAD 254
K+ DY + +K +LS +A K+ +KW L + L ++L K R NW+
Sbjct: 139 WKLMSDYELKLKGFIELSEMANQKLRC-KEKWTFNGLIKHLFKEQLYKRKSYRCSNWDIF 197
Query: 255 VLSKDQLLYAATDAFASWHLYQVLKSLPEPVKDATDQGNQRCSRLDLHNC 304
+L++DQ LYAATDA+A +Y+ L+ + DA + + R R + +C
Sbjct: 198 LLTEDQKLYAATDAYAGLLIYKKLEGM-----DAHESDSFRVGREGVADC 242
>sp|Q14191|WRN_HUMAN Werner syndrome ATP-dependent helicase OS=Homo sapiens GN=WRN PE=1
SV=2
Length = 1432
Score = 120 bits (302), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 113/199 (56%), Gaps = 9/199 (4%)
Query: 89 PAMRFGGQILYSRTSTEVEMAAIELRRILEANKSEAGQVVVGFDIEWKPTFRKGVLPRKA 148
P + F G I+YS +++ + ++ L VVGFD+EW P + +G L K
Sbjct: 45 PFLEFTGSIVYSYDASDCSFLSEDISMSLSDGD------VVGFDMEWPPLYNRGKLG-KV 97
Query: 149 AVMQICGDSNHCYVMQIIH-SGIPPSLQLLLEDSTILKVGVGIGSDAGKVYRDYNVSVKA 207
A++Q+C + CY+ + S P L++LLE+ + K GVGI D K+ RD+++ +K
Sbjct: 98 ALIQLCVSESKCYLFHVSSMSVFPQGLKMLLENKAVKKAGVGIEGDQWKLLRDFDIKLKN 157
Query: 208 SEDLSYLAKHKIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAATD 267
+L+ +A K+ ++ W L SL + L+ K+L K IR NW L++DQ LYAATD
Sbjct: 158 FVELTDVANKKLKC-TETWSLNSLVKHLLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATD 216
Query: 268 AFASWHLYQVLKSLPEPVK 286
A+A + +Y+ L+ L + V+
Sbjct: 217 AYAGFIIYRNLEILDDTVQ 235
>sp|O09053|WRN_MOUSE Werner syndrome ATP-dependent helicase homolog OS=Mus musculus
GN=Wrn PE=1 SV=3
Length = 1401
Score = 118 bits (295), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 109/194 (56%), Gaps = 9/194 (4%)
Query: 89 PAMRFGGQILYSRTSTEVEMAAIELRRILEANKSEAGQVVVGFDIEWKPTFRKGVLPRKA 148
P + F G I+YS +++ + ++ L VVGFD+EW P ++ G R
Sbjct: 39 PFLEFPGSIVYSYEASDCSFLSEDISMRLSDGD------VVGFDMEWPPIYKPGKRSR-V 91
Query: 149 AVMQICGDSNHCYVMQIIH-SGIPPSLQLLLEDSTILKVGVGIGSDAGKVYRDYNVSVKA 207
AV+Q+C + CY+ I S P L++LLE+ +I K GVGI D K+ RD++V +++
Sbjct: 92 AVIQLCVSESKCYLFHISSMSVFPQGLKMLLENKSIKKAGVGIEGDQWKLLRDFDVKLES 151
Query: 208 SEDLSYLAKHKIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAATD 267
+L+ +A K+ ++ W L L + ++ K+L K IR NW L++DQ LYAATD
Sbjct: 152 FVELTDVANEKLKC-AETWSLNGLVKHVLGKQLLKDKSIRCSNWSNFPLTEDQKLYAATD 210
Query: 268 AFASWHLYQVLKSL 281
A+A +YQ L +L
Sbjct: 211 AYAGLIIYQKLGNL 224
>sp|B3NZ68|WRNXO_DROER Werner Syndrome-like exonuclease OS=Drosophila erecta GN=WRNexo
PE=3 SV=1
Length = 354
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 102/200 (51%), Gaps = 15/200 (7%)
Query: 87 KYPAMRFGGQILYSRTSTEVEMAAIELRRILEANKSEAGQVVVGFDIEWKPTFRKGVLPR 146
K P +++ G I Y S ++ +A ++ + +E K E V + FD+EW +F+ G P
Sbjct: 120 KLPFIKYKGAIKYYTESQDIAASADDVLQWVEKQKDEV--VPMAFDMEWPFSFQTG--PG 175
Query: 147 KAAVMQICGDSNHCYVMQIIH-SGIPPSLQLLLEDSTILKVGVGIGSDAGKVYRDY-NVS 204
K+AV+QIC D CY+ Q+ + +P L L+ S + GV I +D K+ RD+ VS
Sbjct: 176 KSAVIQICVDEKCCYIYQLTNLKKLPAVLVALINHSKVRLHGVNIKNDFRKLARDFPEVS 235
Query: 205 ----VKASEDLSYLAKH--KIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSK 258
++ DL + GG +W L LT + K + K ++R+ W L +
Sbjct: 236 AEPLIEKCVDLGVWCNEVCETGG---RWSLERLTNFIAKKAMDKSKKVRMSKWHVIPLDE 292
Query: 259 DQLLYAATDAFASWHLYQVL 278
+QL+YAA D + +Y+ L
Sbjct: 293 NQLMYAAIDVYIGQVIYREL 312
>sp|Q9VE86|WRNXO_DROME Werner Syndrome-like exonuclease OS=Drosophila melanogaster
GN=WRNexo PE=1 SV=2
Length = 353
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 100/200 (50%), Gaps = 15/200 (7%)
Query: 87 KYPAMRFGGQILYSRTSTEVEMAAIELRRILEANKSEAGQVVVGFDIEWKPTFRKGVLPR 146
K P +++ G I Y S ++ +A ++ + +E K E V + FD+EW +F+ G P
Sbjct: 119 KLPFIKYKGAIKYFTESQDIAASADDVLQWVEKQKDEV--VPMAFDMEWPFSFQTG--PG 174
Query: 147 KAAVMQICGDSNHCYVMQIIH-SGIPPSLQLLLEDSTILKVGVGIGSDAGKVYRDY---- 201
K+AV+QIC D CY+ Q+ + +P +L L+ + GV I +D K+ RD+
Sbjct: 175 KSAVIQICVDEKCCYIYQLTNVKKLPAALVALINHPKVRLHGVNIKNDFRKLARDFPEVT 234
Query: 202 -NVSVKASEDLSYLAKH--KIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSK 258
++ DL + GG +W L LT + K + K ++R+ W L +
Sbjct: 235 AEPLIEKCVDLGLWCNEVCETGG---RWSLERLTNFIAKKAMDKSKKVRMSKWHVIPLDE 291
Query: 259 DQLLYAATDAFASWHLYQVL 278
+QL+YAA D + +Y+ L
Sbjct: 292 NQLMYAAIDVYIGQVIYREL 311
>sp|B4PLB3|WRNXO_DROYA Werner Syndrome-like exonuclease OS=Drosophila yakuba GN=WRNexo
PE=3 SV=1
Length = 354
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 15/200 (7%)
Query: 87 KYPAMRFGGQILYSRTSTEVEMAAIELRRILEANKSEAGQVVVGFDIEWKPTFRKGVLPR 146
K P +++ G I Y + ++ +A ++ + +E K E V + FD+EW +F+ G P
Sbjct: 120 KLPFIKYKGAIKYYTENQDIAASADDVLQWVEKQKDEV--VPMAFDMEWPFSFQTG--PG 175
Query: 147 KAAVMQICGDSNHCYVMQIIH-SGIPPSLQLLLEDSTILKVGVGIGSDAGKVYRDY-NVS 204
K+AV+QIC D CY+ Q+ + +P L L+ + GV I +D K+ RD+ VS
Sbjct: 176 KSAVIQICVDEKCCYIYQLTNLKKLPAVLVALINHPKVRLHGVNIKNDFRKLARDFPEVS 235
Query: 205 ----VKASEDLSYLAKH--KIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSK 258
++ DL + GG +W L LT + K + K ++R+ W L +
Sbjct: 236 AEPLIEKCVDLGLWCNEVCETGG---RWSLERLTNFIAKKAMDKSKKVRMSKWHVIPLDE 292
Query: 259 DQLLYAATDAFASWHLYQVL 278
+QL+YAA D + +Y+ L
Sbjct: 293 NQLMYAAIDVYIGQVIYREL 312
>sp|B4I298|WRNXO_DROSE Werner Syndrome-like exonuclease OS=Drosophila sechellia GN=WRNexo
PE=3 SV=2
Length = 354
Score = 88.2 bits (217), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 100/200 (50%), Gaps = 15/200 (7%)
Query: 87 KYPAMRFGGQILYSRTSTEVEMAAIELRRILEANKSEAGQVVVGFDIEWKPTFRKGVLPR 146
K P +++ G I Y S ++ +A ++ + +E K + V + FD+EW +F+ G P
Sbjct: 120 KLPFIKYKGAIKYFTESQDIAASADDVLQWVEKQKDDV--VPMAFDMEWPFSFQTG--PG 175
Query: 147 KAAVMQICGDSNHCYVMQIIH-SGIPPSLQLLLEDSTILKVGVGIGSDAGKVYRDY---- 201
K++V+QIC D CY+ Q+ + +P +L L+ + GV I +D K+ RD+
Sbjct: 176 KSSVIQICVDEKCCYIYQLTNVKKLPAALVALINHPKVRLHGVNIKNDFRKLARDFPEVT 235
Query: 202 -NVSVKASEDLSYLAKH--KIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSK 258
++ DL + GG +W L LT + K + K ++R+ W L +
Sbjct: 236 AEPLIEKCVDLGLWCNEVCETGG---RWSLERLTNFIAKKAMDKSKKVRMSKWHVIPLDE 292
Query: 259 DQLLYAATDAFASWHLYQVL 278
+QL+YAA D + +Y+ L
Sbjct: 293 NQLMYAAIDVYIGQVIYREL 312
>sp|B4M401|WRNXO_DROVI Werner Syndrome-like exonuclease OS=Drosophila virilis GN=WRNexo
PE=3 SV=2
Length = 330
Score = 88.2 bits (217), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 118/254 (46%), Gaps = 26/254 (10%)
Query: 37 RKRQLSPPV----HNNHTHRPMSITSRRLPSSL--VASPSSPSFSLSHCQGANMRLKYPA 90
RK + +P + N T P S RL S +A +PS + K P
Sbjct: 45 RKNKDTPEIIKDKENADTENPPKRRSARLTRSTRSMAEDGTPS------PEKEIPEKLPF 98
Query: 91 MRFGGQILYSRTSTEVEMAAIELRRILEANKSEAGQVVVGFDIEWKPTFRKGVLPRKAAV 150
+++ G I Y S E+ +A E+ + +E ++ A V + FD+EW +F+ G P K++V
Sbjct: 99 IKYRGAIKYYTESHEIAASADEVMQWVE-KQTNADVVPLAFDMEWPFSFQTG--PGKSSV 155
Query: 151 MQICGDSNHCYVMQIIH-SGIPPSLQLLLEDSTILKVGVGIGSDAGKVYRDY-----NVS 204
+QIC + CYV Q+ IP +L LL S + GV I +D K+ RD+
Sbjct: 156 IQICVEERCCYVYQLSKLKRIPAALVALLNHSKVRLHGVNIKADFRKLERDFPEVAAEPL 215
Query: 205 VKASEDLSYLAKH--KIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLL 262
++ DL + GG +W L L + K + K ++R+ W L ++QL+
Sbjct: 216 IEKCIDLGVWCNEVCETGG---RWSLERLANFIAKKAMDKSKKVRMSKWHVIPLDENQLM 272
Query: 263 YAATDAFASWHLYQ 276
YAA D + +Y+
Sbjct: 273 YAAIDVYIGQVIYR 286
>sp|B4QUF6|WRNXO_DROSI Werner Syndrome-like exonuclease OS=Drosophila simulans GN=WRNexo
PE=3 SV=1
Length = 354
Score = 88.2 bits (217), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 100/200 (50%), Gaps = 15/200 (7%)
Query: 87 KYPAMRFGGQILYSRTSTEVEMAAIELRRILEANKSEAGQVVVGFDIEWKPTFRKGVLPR 146
K P +++ G I Y S ++ +A ++ + +E K + V + FD+EW +F+ G P
Sbjct: 120 KLPFIKYKGAIKYFTESQDIAASADDVLQWVEKQKDDV--VPMAFDMEWPFSFQTG--PG 175
Query: 147 KAAVMQICGDSNHCYVMQIIH-SGIPPSLQLLLEDSTILKVGVGIGSDAGKVYRDY---- 201
K++V+QIC D CY+ Q+ + +P +L L+ + GV I +D K+ RD+
Sbjct: 176 KSSVIQICVDEKCCYIYQLTNVKKLPAALVALINHPKVRLHGVNIKNDFRKLARDFPEVT 235
Query: 202 -NVSVKASEDLSYLAKH--KIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSK 258
++ DL + GG +W L LT + K + K ++R+ W L +
Sbjct: 236 AEPLIEKCVDLGLWCNEVCETGG---RWSLERLTNFIAKKAMDKSKKVRMSKWHVIPLDE 292
Query: 259 DQLLYAATDAFASWHLYQVL 278
+QL+YAA D + +Y+ L
Sbjct: 293 NQLMYAAIDVYIGQVIYREL 312
>sp|B4JF25|WRNXO_DROGR Werner Syndrome-like exonuclease OS=Drosophila grimshawi GN=WRNexo
PE=3 SV=1
Length = 331
Score = 87.8 bits (216), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 117/256 (45%), Gaps = 30/256 (11%)
Query: 37 RKRQLSPPV----HNNHTHRPMSITSRRLPSSLVA----SPSSPSFSLSHCQGANMRLKY 88
RK Q +P + N + P S R+ S+ + P+SP + K
Sbjct: 46 RKNQDTPEMIKDKENAESENPPKRRSSRVTRSMRSMAEDGPASPEKEIPK--------KL 97
Query: 89 PAMRFGGQILYSRTSTEVEMAAIELRRILEANKSEAGQVVVGFDIEWKPTFRKGVLPRKA 148
P +++ G I Y S E+ +A E+ + +E + V + FD+EW +F+ G P K+
Sbjct: 98 PFIKYSGAIKYFTESQEIAASADEVMQWVE-KQINMDVVPMAFDMEWPFSFQTG--PGKS 154
Query: 149 AVMQICGDSNHCYVMQIIH-SGIPPSLQLLLEDSTILKVGVGIGSDAGKVYRDY-----N 202
+V+QIC D CYV Q+ + IP +L L+ + GV I +D K+ RD+
Sbjct: 155 SVIQICVDERCCYVYQLSKLNKIPAALAALINHPKVRLHGVNIKADFRKLERDFPEMSAE 214
Query: 203 VSVKASEDLSYLAKH--KIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQ 260
++ DL + GG +W L L + K + K ++R+ W L ++Q
Sbjct: 215 PLIEKCVDLGVWCNQVCETGG---RWSLERLANFIAKKAMDKSKKVRMSKWHVIPLDENQ 271
Query: 261 LLYAATDAFASWHLYQ 276
L+YAA D + +Y+
Sbjct: 272 LMYAAIDVYIGQVIYR 287
>sp|B3LWP6|WRNXO_DROAN Werner Syndrome-like exonuclease OS=Drosophila ananassae GN=WRNexo
PE=3 SV=2
Length = 355
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 99/198 (50%), Gaps = 11/198 (5%)
Query: 87 KYPAMRFGGQILYSRTSTEVEMAAIELRRILEANKSEAGQVVVGFDIEWKPTFRKGVLPR 146
K P +++ G I Y S ++ +A ++ + +E K + V + FD+EW +F+ G P
Sbjct: 121 KLPFIKYKGAIKYYTESQDIAASADDVMQWVEKQKEDV--VPMAFDMEWPFSFQTG--PG 176
Query: 147 KAAVMQICGDSNHCYVMQIIH-SGIPPSLQLLLEDSTILKVGVGIGSDAGKVYRDY---- 201
K++V+QIC D CY+ Q+ + +P +L L+ + GV I +D K+ RD+
Sbjct: 177 KSSVIQICVDEKCCYIYQLTNLKKLPSALVALINHPKVRLHGVNIKADFRKLQRDFPEVS 236
Query: 202 -NVSVKASEDLSYLAKHKIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQ 260
+ ++ DL + I +W L L + K + K ++R+ W L ++Q
Sbjct: 237 ADALIEKCVDLGVWC-NVICQTGGRWSLERLANFICRKAMDKSKKVRMSKWHVIPLDENQ 295
Query: 261 LLYAATDAFASWHLYQVL 278
L+YAA D + +Y+ L
Sbjct: 296 LMYAAIDVYIGQVIYRDL 313
>sp|B4K934|WRNXO_DROMO Werner Syndrome-like exonuclease OS=Drosophila mojavensis GN=WRNexo
PE=3 SV=1
Length = 329
Score = 85.1 bits (209), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 98/198 (49%), Gaps = 14/198 (7%)
Query: 87 KYPAMRFGGQILYSRTSTEVEMAAIELRRILEANKSEAGQVVVGFDIEWKPTFRKGVLPR 146
K P +++ G I Y S E+ +A E+ + ++ ++ V + FD+EW +F+ G P
Sbjct: 94 KLPFIKYRGAIKYFTESQEIAASADEVMQWVD-QQTHTEIVPMAFDMEWPFSFQTG--PG 150
Query: 147 KAAVMQICGDSNHCYVMQIIH-SGIPPSLQLLLEDSTILKVGVGIGSDAGKVYRDY---- 201
K++V+QIC D CYV Q+ + IP +L L+ + GV I +D K+ RD+
Sbjct: 151 KSSVIQICVDERCCYVYQLSNLKKIPAALVALINHPKVRLHGVNIKADFRKLARDFPEVA 210
Query: 202 -NVSVKASEDLSYLAKH--KIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSK 258
++ DL + GG +W L L + K + K ++R+ W L +
Sbjct: 211 AEPLIEKCVDLGVWCNEVCETGG---RWSLERLANFIAKKAMDKSKKVRMSKWHVIPLDE 267
Query: 259 DQLLYAATDAFASWHLYQ 276
+QL+YAA D + +Y+
Sbjct: 268 NQLMYAAIDVYIGQVIYR 285
>sp|B4G5C9|WRNXO_DROPE Werner Syndrome-like exonuclease OS=Drosophila persimilis GN=WRNexo
PE=3 SV=2
Length = 355
Score = 84.7 bits (208), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 101/198 (51%), Gaps = 10/198 (5%)
Query: 87 KYPAMRFGGQILYSRTSTEVEMAAIELRRILEANKSEAGQVVVGFDIEWKPTFRKGVLPR 146
K P +++ G I Y + ++ +A ++ + ++ +++ V + FD+EW +F+ G P
Sbjct: 120 KLPFIKYRGAIKYFTENQDIAASADDVMQWVD-KQTDVDVVPMAFDMEWPFSFQTG--PG 176
Query: 147 KAAVMQICGDSNHCYVMQIIH-SGIPPSLQLLLEDSTILKVGVGIGSDAGKVYRDY---- 201
K++V+QIC D CYV Q+ + +P +L L+ + GV I +D K+ RD+
Sbjct: 177 KSSVIQICVDEKCCYVYQLTNLKKLPAALVALINHPKVRLHGVNIKADFRKLQRDFPEVS 236
Query: 202 -NVSVKASEDLSYLAKHKIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQ 260
+ ++ DL ++I +W L L + K + K ++R+ W L ++Q
Sbjct: 237 ADALIEKCVDLGVWC-NEICETGGRWSLERLANFIAKKAMDKSKKVRMSKWHVIPLDENQ 295
Query: 261 LLYAATDAFASWHLYQVL 278
L+YAA D + +Y+ L
Sbjct: 296 LMYAAIDVYIGQVIYRDL 313
>sp|Q299L3|WRNXO_DROPS Werner Syndrome-like exonuclease OS=Drosophila pseudoobscura
pseudoobscura GN=WRNexo PE=3 SV=2
Length = 356
Score = 84.3 bits (207), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 101/198 (51%), Gaps = 10/198 (5%)
Query: 87 KYPAMRFGGQILYSRTSTEVEMAAIELRRILEANKSEAGQVVVGFDIEWKPTFRKGVLPR 146
K P +++ G I Y + ++ +A ++ + ++ +++ V + FD+EW +F+ G P
Sbjct: 121 KLPFIKYRGAIKYFTENQDIAASADDVMQWVD-KQTDVDVVPMAFDMEWPFSFQTG--PG 177
Query: 147 KAAVMQICGDSNHCYVMQIIH-SGIPPSLQLLLEDSTILKVGVGIGSDAGKVYRDY---- 201
K++V+QIC D CYV Q+ + +P +L L+ + GV I +D K+ RD+
Sbjct: 178 KSSVIQICVDEKCCYVYQLTNLKKLPAALVALINHPKVRLHGVNIKADFRKLQRDFPEVS 237
Query: 202 -NVSVKASEDLSYLAKHKIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQ 260
+ ++ DL ++I +W L L + K + K ++R+ W L ++Q
Sbjct: 238 ADALIEKCVDLGVWC-NEICETGGRWSLERLANFIAKKAMDKSKKVRMSKWHVIPLDENQ 296
Query: 261 LLYAATDAFASWHLYQVL 278
L+YAA D + +Y+ L
Sbjct: 297 LMYAAIDVYIGQVIYRDL 314
>sp|B4N9D3|WRNXO_DROWI Werner Syndrome-like exonuclease OS=Drosophila willistoni GN=WRNexo
PE=3 SV=2
Length = 356
Score = 82.0 bits (201), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 100/198 (50%), Gaps = 10/198 (5%)
Query: 87 KYPAMRFGGQILYSRTSTEVEMAAIELRRILEANKSEAGQVVVGFDIEWKPTFRKGVLPR 146
K P +++ G I Y + E+ +A ++ + ++ ++ V + FD+EW +F+ G P
Sbjct: 121 KLPFIKYKGAIKYYTENHEIAASADDVIQWID-KQTTLDVVPMAFDMEWPFSFQTG--PG 177
Query: 147 KAAVMQICGDSNHCYVMQIIH-SGIPPSLQLLLEDSTILKVGVGIGSDAGKVYRDY-NVS 204
K++V+Q+C D CYV Q+ +P +L LL + GV I +D K+ RD+ VS
Sbjct: 178 KSSVIQVCVDERCCYVYQLSKLKKLPAALVALLNHPKVRLHGVNIKADFRKLQRDFPEVS 237
Query: 205 ----VKASEDLSYLAKHKIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQ 260
++ DL ++I +W L L + K + K ++R+ W L ++Q
Sbjct: 238 ADPLIEKCVDLGVWC-NEICETGGRWSLERLANFIAKKAMDKSKKVRMSKWHVIPLDENQ 296
Query: 261 LLYAATDAFASWHLYQVL 278
L+YAA D + +Y+ L
Sbjct: 297 LMYAAIDVYIGQVIYRDL 314
>sp|Q9NVH0|EXD2_HUMAN Exonuclease 3'-5' domain-containing protein 2 OS=Homo sapiens
GN=EXD2 PE=1 SV=2
Length = 621
Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 84/161 (52%), Gaps = 9/161 (5%)
Query: 128 VVGFDIEWKPTFRKGVLPRKAAVMQICGDSNHCYVM---QIIHSG--IPPSLQLLLEDST 182
V+G D EW K +++Q+ S C ++ ++I G +P +L +L D T
Sbjct: 104 VLGIDCEWVNLEGKA---SPLSLLQMASPSGLCVLVRLPKLICGGKTLPRTLLDILADGT 160
Query: 183 ILKVGVGIGSDAGKVYRDYNVSVKASEDLSYLA-KHKIGGDSQKWGLASLTEMLVCKELK 241
ILKVGVG DA K+ +DY + V+ DL YLA + + L SL E ++ L
Sbjct: 161 ILKVGVGCSEDASKLLQDYGLVVRGCLDLRYLAMRQRNNLLCNGLSLKSLAETVLNFPLD 220
Query: 242 KPNRIRLGNWEADVLSKDQLLYAATDAFASWHLYQVLKSLP 282
K +R NW+A+ L++DQ++YAA DA S L+ L P
Sbjct: 221 KSLLLRCSNWDAETLTEDQVIYAARDAQISVALFLHLLGYP 261
>sp|Q8VEG4|EXD2_MOUSE Exonuclease 3'-5' domain-containing protein 2 OS=Mus musculus
GN=Exd2 PE=2 SV=1
Length = 496
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 81/149 (54%), Gaps = 14/149 (9%)
Query: 164 QIIHSG--IPPSLQLLLEDSTILKVGVGIGSDAGKVYRDYNVSVKASEDLSYLAKHKIGG 221
++I+ G +P +L +L D ILKVGVG DA K+ +DY + V+ DL YLA K G
Sbjct: 15 RLIYGGRTLPRTLLDILADGAILKVGVGCSEDANKLLQDYGLIVRGCLDLRYLAM-KQGN 73
Query: 222 DSQKWGLA--SLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAATDAFASWHLYQVLK 279
+ GL+ SL E ++ L K +R NW+A+ L++DQ+ YAA DA S L+ L
Sbjct: 74 NILCNGLSLKSLAETILNFPLDKSLLLRCSNWDAENLTEDQVTYAARDAQISVALFLHLL 133
Query: 280 SLP----EPVKDATDQGN-----QRCSRL 299
P +++TDQ N +RC +
Sbjct: 134 GYPFSRDSYEEESTDQINWQKALERCRNM 162
>sp|Q5UQM4|YR431_MIMIV Putative 3'-5' exonuclease R431 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_R431 PE=4 SV=1
Length = 399
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 16/174 (9%)
Query: 117 LEANKSEAGQVVVGFDIEWKPTFRKGVLPRKAAVMQICGDSNHCYVMQIIH-SGIPPSLQ 175
+E N + Q ++G D E T G K +++Q+ S H ++Q+ + +P +L
Sbjct: 125 IENNIYDLKQEIIGLDTE---TLISGK-SEKISIIQLST-SKHNIIIQVNQMNTLPQNLN 179
Query: 176 LLLEDSTILKVGVGIGSDAGKVYRDYNV--SVKASEDLSYL------AKHKIGGDSQKWG 227
+ D +I+KVGV I DA K+ + + +K + DLS L KH + G
Sbjct: 180 KVFFDESIIKVGVAIDIDAKKLLQYFPTINQIKKTLDLSDLFKQTNFTKHISINPKESIG 239
Query: 228 LASLTEMLV--CKELKKPNRIRLGNWEADVLSKDQLLYAATDAFASWHLYQVLK 279
L L ++ E K + I+ NW VL+ DQ+ YA TD++ S +Y L+
Sbjct: 240 LKILAAHVLDLYIENKGDSEIKKSNWNNPVLTSDQVKYAITDSYLSLMIYNELQ 293
>sp|Q8N9H8|MUT7_HUMAN Probable exonuclease mut-7 homolog OS=Homo sapiens GN=EXD3 PE=1
SV=3
Length = 876
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 43/203 (21%)
Query: 128 VVGFDIEWKPTFRKGVLPRKAAVMQICGDSNHCYVMQIIHSGIPPSLQ----------LL 177
VVG D+EW P F G PR +++Q+ + H +++ ++ PP+ Q L
Sbjct: 395 VVGVDVEWTPVFVAGGRPRP-SLLQVAVE-GHVFLLDVLALSQPPTGQGAQAFSRLVAQL 452
Query: 178 LEDSTILKVGVGIGSDAGKVYRDYNVSVKASEDLSYLAKHKIGG---------------- 221
L D +I K+G G+ D K+ S A L+++ K +GG
Sbjct: 453 LSDPSITKLGYGMVGDLQKL----GTSCPA---LAHVEKQILGGMDLLLVHRQMRVASVP 505
Query: 222 ------DSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAATDAFASWHLY 275
+ GL+ L + ++ L K +L NW+ L ++Q++YAA DA+ ++
Sbjct: 506 APAVDRARELRGLSLLVQQVLGTALDKTQ--QLSNWDRRPLCEEQVIYAAADAYCLLEVH 563
Query: 276 QVLKSLPEPVKDATDQGNQRCSR 298
Q L P + D R R
Sbjct: 564 QALCREPARFHLSEDLAGSRRPR 586
>sp|Q179T2|MUT7_AEDAE Probable exonuclease mut-7 homolog OS=Aedes aegypti GN=AAEL005527
PE=3 SV=1
Length = 719
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 90/212 (42%), Gaps = 43/212 (20%)
Query: 126 QVVVGFDIEWKPTFRKGVLPRKAAVMQICGDSNHCYVMQIIHSGIPPS-----LQLLLED 180
Q ++ FD EWKPTF + +++Q+ + Y++ ++ S + P + +
Sbjct: 456 QSMIAFDSEWKPTFGGA---NEVSLIQLAT-WDDVYMIDVMVSQLEPLDWAALAKNVFNR 511
Query: 181 STILKVGVGIGSDAG---KVYRDYNV-----SVKASEDLSYLAKHKIGGDSQKW------ 226
+LK+ +D K +NV S A DL L +H DS ++
Sbjct: 512 DDVLKLSFAPSTDISMFQKALPSFNVMYSSQSTSAILDLQLLWRHVERFDSFRFPYHEES 571
Query: 227 ---GLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAATDAFASWHLY-------- 275
LA+L + + K+L K N+ NW L K+QL YAA DAF +Y
Sbjct: 572 VNQNLANLVRLCLGKKLDKSNQ--FSNWAQRPLRKEQLRYAALDAFCLLEIYDAIEKQLT 629
Query: 276 -------QVLKSLPEPVKDATDQGNQRCSRLD 300
++L +L V+ +D G +R R D
Sbjct: 630 HIQLDPNEILNALLNDVRPPSDSGTRRAGRQD 661
>sp|P34607|MUT7_CAEEL Probable exonuclease mut-7 OS=Caenorhabditis elegans GN=mut-7 PE=1
SV=1
Length = 910
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 107/264 (40%), Gaps = 32/264 (12%)
Query: 55 SITSRRLPSSLVASPSSPSFSLSHCQGANMRLKYPAMRFGGQILY---SRTSTEVEMAAI 111
S +S +LP+ + P L + +R K + G+ L+ + T++ M
Sbjct: 350 SSSSYQLPNVMRDFFRQPDSKLREAKELLVRRKTLQVPLNGEQLFVFENERRTQIHMVKT 409
Query: 112 E-----LRRILEANKSEAGQVVVGFDIEWKPTFRKGVLPRKAAVMQI----CGDSNHCYV 162
E L +++ E V VGFD EWKP+ V K A++Q+ C C
Sbjct: 410 ESEMNYLCSEIKSLSDEPAPVYVGFDSEWKPSNLTAVHDSKIAIIQLFFKNCVWLVDCVE 469
Query: 163 MQ---IIHSGIPPSLQLLLEDSTILKVGVGIGS--DAGKVYRDYNVSVKASE-----DLS 212
++ + L DS + VG + + DA S+K + DL
Sbjct: 470 LEKANMADDWWQKFASRLFGDSPVKVVGFDMRNDLDAMATIPALKSSMKIEDTKNAFDLK 529
Query: 213 YLAKHKIGGD-------SQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAA 265
LA++ D + + LA LT L+ EL K + NW+ L K Q++YAA
Sbjct: 530 RLAENVCDIDMEILELPKKTFKLADLTHYLLGLELDKTEQC--SNWQCRPLRKKQIVYAA 587
Query: 266 TDAFASWHLY-QVLKSLPEPVKDA 288
DA + ++L + E KDA
Sbjct: 588 LDAVVVVETFKKILSIVEEKNKDA 611
>sp|Q03MB1|DER_STRTD GTPase Der OS=Streptococcus thermophilus (strain ATCC BAA-491 /
LMD-9) GN=der PE=3 SV=1
Length = 436
Score = 40.4 bits (93), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 218 KIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAATDAFASWHLYQV 277
+I G + + G + + +KK N + NWEAD+ + Q L A F S Q
Sbjct: 277 RIAGFAHEAGKGIIIVVNKWDTIKKDNHT-VANWEADIRDQFQFLSYAPIVFVSAKTKQR 335
Query: 278 LKSLPEPVKDATDQGNQRCSRLDLHNC 304
L LPE +K ++ N+R S L++
Sbjct: 336 LNKLPEMIKRISESQNRRISSAVLNDV 362
>sp|Q5M5X5|DER_STRT2 GTPase Der OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG
18311) GN=der PE=3 SV=1
Length = 436
Score = 40.4 bits (93), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 218 KIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAATDAFASWHLYQV 277
+I G + + G + + +KK N + NWEAD+ + Q L A F S Q
Sbjct: 277 RIAGFAHEAGKGIIIVVNKWDTIKKDNHT-VANWEADIRDQFQFLSYAPIVFVSAKTKQR 335
Query: 278 LKSLPEPVKDATDQGNQRCSRLDLHNC 304
L LPE +K ++ N+R S L++
Sbjct: 336 LNKLPEMIKRISESQNRRISSAVLNDV 362
>sp|Q5M1D9|DER_STRT1 GTPase Der OS=Streptococcus thermophilus (strain CNRZ 1066) GN=der
PE=3 SV=1
Length = 436
Score = 40.4 bits (93), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 218 KIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAATDAFASWHLYQV 277
+I G + + G + + +KK N + NWEAD+ + Q L A F S Q
Sbjct: 277 RIAGFAHEAGKGIIIVVNKWDTIKKDNHT-VANWEADIRDQFQFLSYAPIVFVSAKTKQR 335
Query: 278 LKSLPEPVKDATDQGNQRCSRLDLHNC 304
L LPE +K ++ N+R S L++
Sbjct: 336 LNKLPEMIKRISESQNRRISSAVLNDV 362
>sp|P34603|YO63_CAEEL Uncharacterized protein ZK1098.3 OS=Caenorhabditis elegans
GN=ZK1098.3 PE=4 SV=2
Length = 784
Score = 37.0 bits (84), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 78/169 (46%), Gaps = 23/169 (13%)
Query: 129 VGFDIEWKPTFRKGVLPRKAAVMQICGDSN----HCYVMQIIHSGIPPSLQL---LLEDS 181
+G+D E+KP V + A++Q+ +C + + S ++L L E +
Sbjct: 447 IGYDSEFKPYHLIDVSTSRLAIIQLFFKDKAWLINCVAIDNLASRDDVWIRLYKGLFESN 506
Query: 182 TILKVGVGIGSDAGKVY------RDYNVS-------VKA-SEDLSYLAKHKIGGDSQKWG 227
VG I D ++ +++ + VK+ +E+++ L+ + ++
Sbjct: 507 KFSIVGFDIRQDIEAMFTVPSINKNFKIENIQNVICVKSLAENVNALSMDILNLSTKTSK 566
Query: 228 LASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAATDAFASWHLYQ 276
L+ L + LV ++ K + GNW+ L ++Q++YA DA A + ++Q
Sbjct: 567 LSVLADHLVGLKMDKSE--QCGNWQCRPLRRNQIIYAVMDAVAVFEVFQ 613
>sp|A0RPN4|HSLV_CAMFF ATP-dependent protease subunit HslV OS=Campylobacter fetus subsp.
fetus (strain 82-40) GN=hslV PE=3 SV=1
Length = 180
Score = 36.6 bits (83), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 15/141 (10%)
Query: 51 HRPMSITSRRLPSSLVASPSSPSFSLSHCQGANMRLKYPAMRFGGQIL--YSRTSTEVEM 108
H + + S++ SF + +G ++++ GG+IL ++ ++ +
Sbjct: 3 HATTILAYKGNKGSIIGGDGQVSFGNTVLKGNAVKIRKL---LGGKILAGFAGSTADAFN 59
Query: 109 AAIELRRILEANKSEAGQVVVGFDIEWKPTFRKGVLPRKAAVMQICGDSNHCYVMQIIHS 168
RILE+ K + + V+ F EW RK + RK M + D H +++
Sbjct: 60 LFDMFERILESTKGDLLKAVIEFSKEW----RKDKVLRKLEAMMLVLDREHIFLLSGTGD 115
Query: 169 GIPPSLQLLLEDSTILKVGVG 189
+ P ED I +G G
Sbjct: 116 VVEP------EDGKIAAIGSG 130
>sp|Q7VJD3|HSLV_HELHP ATP-dependent protease subunit HslV OS=Helicobacter hepaticus
(strain ATCC 51449 / 3B1) GN=hslV PE=3 SV=1
Length = 180
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 10/77 (12%)
Query: 113 LRRILEANKSEAGQVVVGFDIEWKPTFRKGVLPRKAAVMQICGDSNHCYVMQIIHSGIPP 172
RILE K + + V+ F EW RK RK M I ++ H Y++ + P
Sbjct: 68 FERILEGRKGDLVRSVLEFSKEW----RKDKYLRKLEAMMIVLNTEHIYILSGTGDVVEP 123
Query: 173 SLQLLLEDSTILKVGVG 189
ED TI +G G
Sbjct: 124 ------EDGTIAAIGSG 134
>sp|P25859|CKB11_ARATH Cyclin-dependent kinase B1-1 OS=Arabidopsis thaliana GN=CDKB1-1
PE=1 SV=2
Length = 309
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 15/78 (19%)
Query: 138 TFRKGVLPR-------KAAVMQICGDSNHCYVMQIIHSGIPPSLQLLLEDSTILKVG-VG 189
++RKG P+ + + Q+C HC+ ++H + P LL++D +LK+ +G
Sbjct: 104 SYRKGPNPKPLEPFLIQKLMFQLCKGVAHCHSHGVLHRDLKPQNLLLVKDKELLKIADLG 163
Query: 190 IGSDAGKVYRDYNVSVKA 207
+G R + V +K+
Sbjct: 164 LG-------RAFTVPLKS 174
>sp|Q38774|CDC2C_ANTMA Cell division control protein 2 homolog C OS=Antirrhinum majus
GN=CDC2C PE=2 SV=1
Length = 305
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 17/96 (17%)
Query: 140 RKGVLPR-------KAAVMQICGDSNHCYVMQIIHSGIPPSLQLLLEDSTILKVGVGIGS 192
RKG PR ++ + Q+C +HC+ ++H + P LL +D +LK+ +
Sbjct: 102 RKGPNPRPLPPQQIQSFLFQLCKGVSHCHAHGVLHRDLKPQNLLLDKDKGVLKI-----A 156
Query: 193 DAGKVYRDYNVSVKASE----DLSYLAKHKIGGDSQ 224
D G + R + V +K+ LSY A + G S
Sbjct: 157 DLG-LARAFTVPLKSYTHEIVTLSYRAPEVLLGSSH 191
>sp|B9DTQ3|DER_STRU0 GTPase Der OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J)
GN=der PE=3 SV=1
Length = 436
Score = 33.1 bits (74), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Query: 218 KIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAATDAFASWHLYQV 277
+I G + + G + + L+K N + WEAD+ + Q L A F S Q
Sbjct: 277 RIAGFAHEAGKGMIIVVNKWDLLEKDNHT-VAKWEADIRDQFQFLSYAPIIFVSALTKQR 335
Query: 278 LKSLPEPVKDATDQGNQRCSRLDLHNC 304
L LPE +K ++ N+R L++
Sbjct: 336 LNKLPELIKKISESQNKRIPSAVLNDV 362
>sp|Q8DS90|DER_STRMU GTPase Der OS=Streptococcus mutans serotype c (strain ATCC 700610 /
UA159) GN=der PE=3 SV=1
Length = 436
Score = 32.3 bits (72), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Query: 218 KIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAATDAFASWHLYQV 277
+I G + + G + + +KK NR + WEAD+ Q + A F S Q
Sbjct: 277 RIAGFAHEAGKGIVVVVNKWDAIKKDNRT-VAQWEADIRDNFQYIPYAPIVFVSAVTKQR 335
Query: 278 LKSLPEPVKDATDQGNQRCSRLDLHNC 304
L LP+ +K + N R L++
Sbjct: 336 LHKLPDVIKQVSQSQNTRIPSAVLNDV 362
>sp|Q14332|FZD2_HUMAN Frizzled-2 OS=Homo sapiens GN=FZD2 PE=2 SV=1
Length = 565
Score = 32.3 bits (72), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
Query: 89 PAMRFGGQILYSRTSTEVEMAAIELRRILEANKSEAGQVVVGFDIEWKPTFRKGVLPRKA 148
P +RF +Y+ T +E A R I E + ++ F +W R PR
Sbjct: 86 PELRFFLCSMYAPVCTVLEQAIPPCRSICERARQGCEALMNKFGFQWPERLRCEHFPRHG 145
Query: 149 AVMQICGDSNHCY--VMQIIHSGIPPSLQ 175
A QIC NH ++ + PP LQ
Sbjct: 146 A-EQICVGQNHSEDGAPALLTTAPPPGLQ 173
>sp|C1CSX0|DER_STRZT GTPase Der OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=der
PE=3 SV=1
Length = 436
Score = 32.3 bits (72), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Query: 218 KIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAATDAFASWHLYQV 277
+I G + + G + + L+K N + NWE D+ + Q L A F S Q
Sbjct: 277 RIAGFAHEAGKGMIIVVNKWDTLEKDNHT-MKNWEEDIREQFQYLPYAPIIFVSALTKQR 335
Query: 278 LKSLPEPVKDATDQGNQRCSRLDLHNC 304
L LPE +K ++ N R L++
Sbjct: 336 LHKLPEMIKQISESQNTRIPSAVLNDV 362
>sp|C1CM45|DER_STRZP GTPase Der OS=Streptococcus pneumoniae (strain P1031) GN=der PE=3
SV=1
Length = 436
Score = 32.3 bits (72), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Query: 218 KIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAATDAFASWHLYQV 277
+I G + + G + + L+K N + NWE D+ + Q L A F S Q
Sbjct: 277 RIAGFAHEAGKGMIIVVNKWDTLEKDNHT-MKNWEEDIREQFQYLPYAPIIFVSALTKQR 335
Query: 278 LKSLPEPVKDATDQGNQRCSRLDLHNC 304
L LPE +K ++ N R L++
Sbjct: 336 LHKLPEMIKQISESQNTRIPSAVLNDV 362
>sp|C1CFT0|DER_STRZJ GTPase Der OS=Streptococcus pneumoniae (strain JJA) GN=der PE=3
SV=1
Length = 436
Score = 32.3 bits (72), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Query: 218 KIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAATDAFASWHLYQV 277
+I G + + G + + L+K N + NWE D+ + Q L A F S Q
Sbjct: 277 RIAGFAHEAGKGMIIVVNKWDTLEKDNHT-MKNWEEDIREQFQYLPYAPIIFVSALTKQR 335
Query: 278 LKSLPEPVKDATDQGNQRCSRLDLHNC 304
L LPE +K ++ N R L++
Sbjct: 336 LHKLPEMIKQISESQNTRIPSAVLNDV 362
>sp|P64063|DER_STRR6 GTPase Der OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
GN=der PE=3 SV=1
Length = 436
Score = 32.3 bits (72), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Query: 218 KIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAATDAFASWHLYQV 277
+I G + + G + + L+K N + NWE D+ + Q L A F S Q
Sbjct: 277 RIAGFAHEAGKGMIIVVNKWDTLEKDNHT-MKNWEEDIREQFQYLPYAPIIFVSALTKQR 335
Query: 278 LKSLPEPVKDATDQGNQRCSRLDLHNC 304
L LPE +K ++ N R L++
Sbjct: 336 LHKLPEMIKQISESQNTRIPSAVLNDV 362
>sp|B2IRW4|DER_STRPS GTPase Der OS=Streptococcus pneumoniae (strain CGSP14) GN=der PE=3
SV=1
Length = 436
Score = 32.3 bits (72), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Query: 218 KIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAATDAFASWHLYQV 277
+I G + + G + + L+K N + NWE D+ + Q L A F S Q
Sbjct: 277 RIAGFAHEAGKGMIIVVNKWDTLEKDNHT-MKNWEEDIREQFQYLPYAPIIFVSALTKQR 335
Query: 278 LKSLPEPVKDATDQGNQRCSRLDLHNC 304
L LPE +K ++ N R L++
Sbjct: 336 LHKLPEMIKQISESQNTRIPSAVLNDV 362
>sp|P64062|DER_STRPN GTPase Der OS=Streptococcus pneumoniae serotype 4 (strain ATCC
BAA-334 / TIGR4) GN=der PE=3 SV=1
Length = 436
Score = 32.3 bits (72), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Query: 218 KIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAATDAFASWHLYQV 277
+I G + + G + + L+K N + NWE D+ + Q L A F S Q
Sbjct: 277 RIAGFAHEAGKGMIIVVNKWDTLEKDNHT-MKNWEEDIREQFQYLPYAPIIFVSALTKQR 335
Query: 278 LKSLPEPVKDATDQGNQRCSRLDLHNC 304
L LPE +K ++ N R L++
Sbjct: 336 LHKLPEMIKQISESQNTRIPSAVLNDV 362
>sp|B8ZMH4|DER_STRPJ GTPase Der OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain
23F-1) GN=der PE=3 SV=1
Length = 436
Score = 32.3 bits (72), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Query: 218 KIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAATDAFASWHLYQV 277
+I G + + G + + L+K N + NWE D+ + Q L A F S Q
Sbjct: 277 RIAGFAHEAGKGMIIVVNKWDTLEKDNHT-MKNWEEDIREQFQYLPYAPIIFVSALTKQR 335
Query: 278 LKSLPEPVKDATDQGNQRCSRLDLHNC 304
L LPE +K ++ N R L++
Sbjct: 336 LHKLPEMIKQISESQNTRIPSAVLNDV 362
>sp|B1I766|DER_STRPI GTPase Der OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=der
PE=3 SV=1
Length = 436
Score = 32.3 bits (72), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Query: 218 KIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAATDAFASWHLYQV 277
+I G + + G + + L+K N + NWE D+ + Q L A F S Q
Sbjct: 277 RIAGFAHEAGKGMIIVVNKWDTLEKDNHT-MKNWEEDIREQFQYLPYAPIIFVSALTKQR 335
Query: 278 LKSLPEPVKDATDQGNQRCSRLDLHNC 304
L LPE +K ++ N R L++
Sbjct: 336 LHKLPEMIKQISESQNTRIPSAVLNDV 362
>sp|C1C8U6|DER_STRP7 GTPase Der OS=Streptococcus pneumoniae (strain 70585) GN=der PE=3
SV=1
Length = 436
Score = 32.3 bits (72), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Query: 218 KIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAATDAFASWHLYQV 277
+I G + + G + + L+K N + NWE D+ + Q L A F S Q
Sbjct: 277 RIAGFAHEAGKGMIIVVNKWDTLEKDNHT-MKNWEEDIREQFQYLPYAPIIFVSALTKQR 335
Query: 278 LKSLPEPVKDATDQGNQRCSRLDLHNC 304
L LPE +K ++ N R L++
Sbjct: 336 LHKLPEMIKQISESQNTRIPSAVLNDV 362
>sp|B5E756|DER_STRP4 GTPase Der OS=Streptococcus pneumoniae serotype 19F (strain G54)
GN=der PE=3 SV=1
Length = 436
Score = 32.3 bits (72), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Query: 218 KIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAATDAFASWHLYQV 277
+I G + + G + + L+K N + NWE D+ + Q L A F S Q
Sbjct: 277 RIAGFAHEAGKGMIIVVNKWDTLEKDNHT-MKNWEEDIREQFQYLPYAPIIFVSALTKQR 335
Query: 278 LKSLPEPVKDATDQGNQRCSRLDLHNC 304
L LPE +K ++ N R L++
Sbjct: 336 LHKLPEMIKQISESQNTRIPSAVLNDV 362
>sp|Q04J64|DER_STRP2 GTPase Der OS=Streptococcus pneumoniae serotype 2 (strain D39 /
NCTC 7466) GN=der PE=3 SV=1
Length = 436
Score = 32.3 bits (72), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Query: 218 KIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAATDAFASWHLYQV 277
+I G + + G + + L+K N + NWE D+ + Q L A F S Q
Sbjct: 277 RIAGFAHEAGKGMIIVVNKWDTLEKDNHT-MKNWEEDIREQFQYLPYAPIIFVSALTKQR 335
Query: 278 LKSLPEPVKDATDQGNQRCSRLDLHNC 304
L LPE +K ++ N R L++
Sbjct: 336 LHKLPEMIKQISESQNTRIPSAVLNDV 362
>sp|Q9VIF1|MUT7_DROME Probable exonuclease mut-7 homolog OS=Drosophila melanogaster
GN=CG9247 PE=1 SV=1
Length = 625
Score = 32.0 bits (71), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 48/118 (40%), Gaps = 18/118 (15%)
Query: 177 LLEDSTILKVGVGIGSDAGKVYRDYNVSVKASEDLSYL---------AKHKIG-----GD 222
+ + I KVG + SD + R + ++ YL K + G G+
Sbjct: 482 IFNNVNIRKVGFSMVSDLSVLQRSLPLQLRLQMPHHYLDLRNLWLELKKQRFGVELPFGN 541
Query: 223 SQKWGLASLTEMLVC--KELKKPNRIRLGNWEADVLSKDQLLYAATDAFASWHLYQVL 278
+ G A L C K+L K N+ NW L ++Q+LYAA DA +Y L
Sbjct: 542 VNRAGDALTDLSLACLGKKLNKSNQC--SNWANRPLRREQILYAAIDARCLMLIYNTL 597
>sp|Q8DY73|DER_STRA5 GTPase Der OS=Streptococcus agalactiae serotype V (strain ATCC
BAA-611 / 2603 V/R) GN=der PE=3 SV=1
Length = 436
Score = 31.6 bits (70), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Query: 218 KIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAATDAFASWHLYQV 277
+I G + + G + + ++K N + WEAD+ Q L A F S Q
Sbjct: 277 RIAGFAHETGKGIIIVVNKWDTIEKDNHT-VSQWEADIRDNFQFLSYAPIIFVSAETKQR 335
Query: 278 LKSLPEPVKDATDQGNQRCSRLDLHNC 304
L LP+ +K ++ N+R L++
Sbjct: 336 LHKLPDMIKRISESQNKRIPSAVLNDV 362
>sp|Q3JZR6|DER_STRA1 GTPase Der OS=Streptococcus agalactiae serotype Ia (strain ATCC
27591 / A909 / CDC SS700) GN=der PE=3 SV=1
Length = 436
Score = 31.6 bits (70), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Query: 218 KIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAATDAFASWHLYQV 277
+I G + + G + + ++K N + WEAD+ Q L A F S Q
Sbjct: 277 RIAGFAHETGKGIIIVVNKWDTIEKDNHT-VSQWEADIRDNFQFLSYAPIIFVSAETKQR 335
Query: 278 LKSLPEPVKDATDQGNQRCSRLDLHNC 304
L LP+ +K ++ N+R L++
Sbjct: 336 LHKLPDMIKRISESQNKRIPSAVLNDV 362
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110,174,655
Number of Sequences: 539616
Number of extensions: 4415408
Number of successful extensions: 11790
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 11723
Number of HSP's gapped (non-prelim): 63
length of query: 304
length of database: 191,569,459
effective HSP length: 117
effective length of query: 187
effective length of database: 128,434,387
effective search space: 24017230369
effective search space used: 24017230369
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)