Query 022028
Match_columns 304
No_of_seqs 149 out of 1873
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 12:54:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022028.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022028hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aql_A Guanine deaminase; hydr 100.0 2.3E-40 7.8E-45 306.6 23.0 283 18-302 30-333 (476)
2 4dyk_A Amidohydrolase; adenosi 100.0 1.3E-39 4.6E-44 299.5 23.2 273 17-302 6-290 (451)
3 4dzh_A Amidohydrolase; adenosi 100.0 1.7E-39 6E-44 300.6 22.8 273 18-302 13-297 (472)
4 3lnp_A Amidohydrolase family p 100.0 9.9E-39 3.4E-43 295.1 25.5 273 18-302 22-315 (468)
5 4f0r_A 5-methylthioadenosine/S 100.0 1.1E-38 3.8E-43 293.1 23.1 273 17-302 4-288 (447)
6 3h4u_A Amidohydrolase; signatu 100.0 1.7E-38 5.6E-43 294.5 24.3 278 18-302 28-328 (479)
7 3ls9_A Triazine hydrolase; atr 100.0 1.4E-37 4.6E-42 286.4 26.4 273 21-302 2-306 (456)
8 3v7p_A Amidohydrolase family p 100.0 8E-37 2.7E-41 279.2 14.5 265 21-302 2-289 (427)
9 4f0l_A Amidohydrolase; ssgcid, 100.0 2.6E-36 8.9E-41 278.2 15.5 266 16-302 9-310 (458)
10 3mdu_A N-formimino-L-glutamate 100.0 1.3E-35 4.5E-40 273.2 18.6 261 23-302 4-301 (453)
11 2i9u_A Cytosine/guanine deamin 100.0 2.4E-33 8.3E-38 257.0 23.4 276 18-301 8-300 (439)
12 2paj_A Putative cytosine/guani 100.0 9.3E-33 3.2E-37 256.7 25.8 274 19-301 10-316 (492)
13 2ood_A BLR3880 protein; PSI-II 100.0 4.1E-33 1.4E-37 258.1 23.0 275 19-301 3-304 (475)
14 2imr_A Hypothetical protein DR 100.0 1.3E-31 4.4E-36 244.3 19.7 276 6-301 23-334 (420)
15 3hpa_A Amidohydrolase; signatu 100.0 8.1E-30 2.8E-34 234.7 25.9 277 18-301 28-327 (479)
16 1p1m_A Hypothetical protein TM 100.0 3E-31 1E-35 240.7 13.6 250 21-302 1-260 (406)
17 1ra0_A Cytosine deaminase; alp 100.0 2E-28 6.7E-33 223.8 11.0 252 18-300 7-287 (430)
18 3feq_A Putative amidohydrolase 99.9 8.8E-26 3E-30 205.5 18.9 228 18-291 3-261 (423)
19 3gnh_A L-lysine, L-arginine ca 99.9 8.5E-25 2.9E-29 197.7 20.0 230 19-291 2-256 (403)
20 2r8c_A Putative amidohydrolase 99.9 1.6E-24 5.6E-29 197.6 21.1 229 17-291 2-264 (426)
21 2qt3_A N-isopropylammelide iso 99.9 3.6E-25 1.2E-29 200.3 14.6 234 18-287 4-255 (403)
22 2qs8_A XAA-Pro dipeptidase; am 99.9 6.2E-23 2.1E-27 186.6 20.1 232 19-291 7-265 (418)
23 3be7_A Zn-dependent arginine c 99.9 2.6E-22 8.9E-27 181.8 21.5 232 16-291 3-255 (408)
24 1yrr_A N-acetylglucosamine-6-p 99.9 3.3E-24 1.1E-28 192.8 6.3 229 21-291 2-258 (382)
25 2bb0_A Imidazolonepropionase; 99.9 4.5E-22 1.5E-26 181.1 18.6 250 19-299 5-301 (421)
26 2q09_A Imidazolonepropionase; 99.9 1.5E-22 5E-27 184.1 15.4 251 20-299 6-294 (416)
27 2p9b_A Possible prolidase; pro 99.9 5.3E-22 1.8E-26 182.6 19.0 245 18-291 12-276 (458)
28 2puz_A Imidazolonepropionase; 99.9 3.6E-22 1.2E-26 181.6 16.8 255 18-299 14-306 (419)
29 2vhl_A N-acetylglucosamine-6-p 99.8 2.1E-21 7.3E-26 175.3 9.3 227 18-291 2-265 (396)
30 3ooq_A Amidohydrolase; structu 99.8 1E-21 3.5E-26 177.5 3.5 114 19-145 5-118 (396)
31 2fty_A Dihydropyrimidinase; al 99.8 2E-19 6.8E-24 169.0 18.3 190 20-252 4-207 (559)
32 2vr2_A Dihydropyrimidinase; hy 99.8 8.6E-20 2.9E-24 171.2 12.4 191 19-248 27-219 (541)
33 2vm8_A Dihydropyrimidinase-rel 99.8 2.5E-18 8.6E-23 159.9 18.9 181 18-245 25-212 (501)
34 2vun_A Enamidase; nicotinate d 99.8 4.2E-19 1.4E-23 159.5 12.5 216 18-291 1-234 (386)
35 2ftw_A Dihydropyrimidine amido 99.8 6.8E-19 2.3E-23 164.4 14.2 188 18-248 7-196 (521)
36 1gkp_A Hydantoinase; hydrolase 99.8 1E-18 3.5E-23 160.5 15.1 187 21-254 2-193 (458)
37 1e9y_B Urease subunit beta; hy 99.8 2.6E-18 8.8E-23 161.1 16.9 165 18-245 65-251 (569)
38 2ogj_A Dihydroorotase; TIM bar 99.8 7.3E-19 2.5E-23 159.7 11.6 216 16-287 12-237 (417)
39 1gkr_A Hydantoinase, non-ATP d 99.8 1.5E-17 5E-22 152.7 19.5 178 19-251 2-191 (458)
40 3dc8_A Dihydropyrimidinase; TI 99.8 1.4E-17 5E-22 154.0 19.5 182 20-250 2-187 (490)
41 1rk6_A D-aminoacylase; TIM bar 99.8 1.5E-18 5E-23 161.3 11.8 203 19-246 21-267 (496)
42 3sfw_A Dihydropyrimidinase; hy 99.8 4.1E-18 1.4E-22 156.8 14.6 184 20-250 2-190 (461)
43 3icj_A Uncharacterized metal-d 99.8 9.4E-18 3.2E-22 156.4 17.1 237 20-291 37-383 (534)
44 1xrt_A Dihydroorotase, dhoase; 99.8 4.8E-18 1.7E-22 156.6 13.5 174 20-247 48-230 (467)
45 2ics_A Adenine deaminase; TIM 99.7 5.5E-18 1.9E-22 151.7 11.4 185 19-251 5-197 (379)
46 3gri_A Dihydroorotase, dhoase; 99.7 2E-17 6.8E-22 150.6 14.6 172 21-246 2-181 (424)
47 2z00_A Dihydroorotase; zinc bi 99.7 8.3E-17 2.8E-21 146.3 18.3 169 21-247 2-179 (426)
48 3mpg_A Dihydroorotase, dhoase; 99.7 1E-16 3.4E-21 146.1 18.6 173 20-246 2-182 (428)
49 3gip_A N-acyl-D-glutamate deac 99.7 1.1E-16 3.8E-21 148.0 19.1 183 17-244 5-220 (480)
50 3e74_A Allantoinase; (beta/alp 99.7 4.3E-17 1.5E-21 150.3 15.0 176 17-245 21-209 (473)
51 1o12_A N-acetylglucosamine-6-p 99.7 8.1E-19 2.8E-23 157.4 1.3 194 39-291 28-251 (376)
52 3hm7_A Allantoinase; metallo-d 99.7 1.6E-16 5.4E-21 145.7 14.9 172 18-245 5-191 (448)
53 4ac7_C Urease subunit alpha; h 99.7 4.1E-16 1.4E-20 144.7 15.4 164 18-244 66-251 (570)
54 4ubp_C Protein (urease (chain 99.7 4.1E-16 1.4E-20 144.7 15.4 164 18-244 66-251 (570)
55 3iv8_A N-acetylglucosamine-6-p 99.7 1.4E-16 4.9E-21 141.7 11.5 193 21-257 5-207 (381)
56 2gwn_A Dihydroorotase; zinc-bi 99.7 6.6E-17 2.3E-21 148.4 9.1 95 19-146 4-99 (452)
57 3nqb_A Adenine deaminase 2; PS 99.7 5.9E-16 2E-20 146.5 15.6 207 19-291 35-252 (608)
58 3mtw_A L-arginine carboxypepti 99.7 2E-15 6.9E-20 133.5 17.1 109 20-148 3-111 (403)
59 1onw_A Isoaspartyl dipeptidase 99.7 1.3E-15 4.5E-20 136.9 16.0 194 18-255 7-214 (390)
60 3ggm_A Uncharacterized protein 99.7 2.3E-16 7.9E-21 109.4 8.3 70 18-91 3-72 (81)
61 4gy7_A Urease; JACK bean, hydr 99.7 2.1E-15 7.1E-20 146.4 17.2 81 7-91 324-412 (840)
62 1nfg_A D-hydantoinase; TIM bar 99.7 2.3E-16 7.8E-21 144.8 9.4 182 20-250 2-188 (457)
63 3mkv_A Putative amidohydrolase 99.6 8.9E-16 3.1E-20 136.4 9.7 71 16-92 1-71 (426)
64 4ep8_C Urease subunit alpha; a 99.5 6.2E-15 2.1E-19 139.0 5.1 84 7-94 53-141 (566)
65 2pgf_A Adenosine deaminase; me 99.4 1.1E-12 3.8E-17 116.8 8.5 172 100-301 90-294 (371)
66 3pao_A Adenosine deaminase; st 99.0 2.2E-09 7.6E-14 93.5 10.1 170 102-301 55-253 (326)
67 3rys_A Adenosine deaminase 1; 98.9 1.5E-08 5.1E-13 88.8 11.8 169 103-301 59-256 (343)
68 2vc7_A Aryldialkylphosphatase; 98.7 3.9E-07 1.3E-11 79.1 14.7 179 81-290 17-209 (314)
69 3iar_A Adenosine deaminase; pu 98.5 1.1E-06 3.9E-11 77.5 12.8 152 119-301 72-268 (367)
70 2ob3_A Parathion hydrolase; me 98.3 5.8E-06 2E-10 72.2 12.8 144 129-290 51-206 (330)
71 3tn4_A Phosphotriesterase; lac 98.2 3E-05 1E-09 68.2 14.1 184 81-289 52-248 (360)
72 1bf6_A Phosphotriesterase homo 98.2 1.7E-05 5.9E-10 67.6 11.6 150 128-290 36-195 (291)
73 2z26_A Dihydroorotase, dhoase; 98.1 1.9E-05 6.6E-10 69.4 10.1 25 220-244 117-141 (347)
74 3pnu_A Dihydroorotase; TIM bar 98.1 3.3E-05 1.1E-09 68.0 11.5 69 221-291 134-222 (359)
75 2y1h_A Putative deoxyribonucle 97.7 0.00048 1.6E-08 58.1 13.0 137 131-290 26-177 (272)
76 3ovg_A Amidohydrolase; structu 97.7 0.00048 1.7E-08 60.6 12.6 144 129-284 53-219 (363)
77 3gtx_A Organophosphorus hydrol 97.7 0.00046 1.6E-08 60.3 12.2 182 81-287 32-227 (339)
78 3k2g_A Resiniferatoxin-binding 97.6 0.0016 5.4E-08 57.4 14.5 140 126-284 87-241 (364)
79 3pnz_A Phosphotriesterase fami 97.6 0.00028 9.6E-09 61.4 9.3 146 127-283 48-217 (330)
80 1zzm_A Putative deoxyribonucle 97.5 0.00078 2.7E-08 56.3 11.0 131 131-287 25-163 (259)
81 1xwy_A DNAse TATD, deoxyribonu 97.3 0.0002 6.9E-09 60.1 4.7 53 223-289 112-164 (264)
82 3rcm_A TATD family hydrolase; 97.3 0.0013 4.3E-08 56.1 9.3 56 222-291 113-168 (287)
83 4gxw_A Adenosine deaminase; am 97.3 0.0062 2.1E-07 53.8 14.0 155 118-300 89-273 (380)
84 3ipw_A Hydrolase TATD family p 97.1 0.0013 4.5E-08 56.8 7.4 55 223-291 154-209 (325)
85 4i6k_A Amidohydrolase family p 96.9 0.012 4.2E-07 50.0 12.0 156 78-285 23-184 (294)
86 3guw_A Uncharacterized protein 96.8 0.034 1.2E-06 46.4 14.0 53 222-282 109-161 (261)
87 3lgd_A Adenosine deaminase CEC 96.8 0.0057 1.9E-07 56.0 9.8 71 220-301 306-391 (508)
88 3rhg_A Putative phophotriester 96.7 0.0043 1.5E-07 54.6 8.2 141 127-283 77-231 (365)
89 1j6o_A TATD-related deoxyribon 96.6 0.0004 1.4E-08 58.6 0.6 56 221-290 118-173 (268)
90 1yix_A Deoxyribonuclease YCFH; 96.4 0.0026 9E-08 53.1 4.6 56 222-291 110-165 (265)
91 2xio_A Putative deoxyribonucle 96.4 0.0016 5.4E-08 55.9 3.1 54 223-290 127-180 (301)
92 2ffi_A 2-pyrone-4,6-dicarboxyl 96.4 0.019 6.5E-07 48.5 9.7 52 219-286 120-172 (288)
93 2gzx_A Putative TATD related D 95.6 0.011 3.7E-07 49.3 4.6 30 221-250 107-136 (265)
94 3gg7_A Uncharacterized metallo 95.5 0.0078 2.7E-07 50.2 3.1 55 222-291 103-158 (254)
95 4d9a_A 2-pyrone-4,6-dicarbaxyl 95.0 0.19 6.5E-06 42.8 10.5 158 77-286 22-185 (303)
96 2dvt_A Thermophilic reversible 94.9 0.072 2.5E-06 45.7 7.8 28 219-246 141-168 (327)
97 4do7_A Amidohydrolase 2; enzym 94.9 0.098 3.4E-06 44.6 8.3 51 221-286 120-171 (303)
98 2a3l_A AMP deaminase, AMPD; at 94.0 0.006 2.1E-07 57.9 -1.5 56 229-301 504-576 (701)
99 3irs_A Uncharacterized protein 93.6 2.1 7.2E-05 35.9 14.1 99 131-246 53-161 (291)
100 3e2v_A 3'-5'-exonuclease; stru 92.7 0.94 3.2E-05 40.0 10.6 27 224-250 180-210 (401)
101 2f6k_A Metal-dependent hydrola 91.5 0.58 2E-05 39.5 7.8 28 220-247 132-159 (307)
102 3cjp_A Predicted amidohydrolas 87.4 1.9 6.4E-05 35.6 7.7 25 221-245 128-153 (272)
103 2gwg_A 4-oxalomesaconate hydra 86.0 0.88 3E-05 39.4 5.0 28 220-247 156-183 (350)
104 1nfg_A D-hydantoinase; TIM bar 82.9 0.85 2.9E-05 40.8 3.6 63 218-292 212-275 (457)
105 2hnh_A DNA polymerase III alph 70.8 9.2 0.00031 37.6 7.2 66 79-171 3-71 (910)
106 1rk6_A D-aminoacylase; TIM bar 66.6 18 0.00063 32.5 8.0 25 220-244 211-235 (496)
107 2yb1_A Amidohydrolase; HET: AM 62.3 19 0.00065 30.1 6.7 61 82-171 3-66 (292)
108 3o0f_A Putative metal-dependen 53.8 23 0.00079 29.8 5.8 61 82-171 14-77 (301)
109 2ki0_A DS119; beta-alpha-beta, 52.2 13 0.00044 19.3 2.4 21 220-240 12-32 (36)
110 2yxo_A Histidinol phosphatase; 46.0 39 0.0013 27.3 6.0 11 82-92 1-11 (267)
111 2hpi_A DNA polymerase III alph 41.2 49 0.0017 33.6 6.7 63 81-170 6-73 (1220)
112 3gm8_A Glycoside hydrolase fam 40.5 2.6E+02 0.0089 27.0 14.5 112 130-243 312-423 (801)
113 3f2b_A DNA-directed DNA polyme 38.4 62 0.0021 32.3 6.8 64 81-171 115-181 (1041)
114 3dx5_A Uncharacterized protein 37.5 1.6E+02 0.0054 23.6 12.5 61 223-286 123-203 (286)
115 3noy_A 4-hydroxy-3-methylbut-2 35.5 1.2E+02 0.004 26.2 7.2 112 134-249 101-217 (366)
116 2wje_A CPS4B, tyrosine-protein 34.0 32 0.0011 27.7 3.5 12 80-91 3-14 (247)
117 3qc0_A Sugar isomerase; TIM ba 33.0 1.8E+02 0.006 23.1 8.0 107 132-243 25-143 (275)
118 2hbv_A 2-amino-3-carboxymucona 31.5 65 0.0022 27.1 5.2 28 219-246 154-181 (334)
119 1twd_A Copper homeostasis prot 30.8 2.2E+02 0.0075 23.2 8.2 52 219-286 100-153 (256)
120 3lmz_A Putative sugar isomeras 30.5 1.3E+02 0.0045 23.8 6.8 90 132-244 37-134 (257)
121 2bdq_A Copper homeostasis prot 30.3 2.1E+02 0.0071 22.8 8.7 52 219-286 103-158 (224)
122 4dci_A Uncharacterized protein 29.6 33 0.0011 25.6 2.6 17 39-55 133-149 (150)
123 3lmz_A Putative sugar isomeras 29.3 1.8E+02 0.0061 23.0 7.4 22 220-241 86-107 (257)
124 1wj6_A KIAA0049 protein, RSGI 27.6 77 0.0026 21.8 3.9 28 220-247 69-96 (101)
125 2ftp_A Hydroxymethylglutaryl-C 26.8 2.7E+02 0.0092 23.0 11.2 107 130-247 88-214 (302)
126 3tc3_A UV damage endonuclease; 26.6 1.3E+02 0.0043 25.4 5.9 14 152-165 64-77 (310)
127 3p6l_A Sugar phosphate isomera 25.5 1.2E+02 0.0043 24.0 5.8 106 149-272 23-129 (262)
128 3e74_A Allantoinase; (beta/alp 24.6 38 0.0013 30.3 2.6 58 223-291 242-299 (473)
129 3sfw_A Dihydropyrimidinase; hy 24.1 68 0.0023 28.4 4.2 58 222-293 218-278 (461)
130 3hm7_A Allantoinase; metallo-d 23.8 44 0.0015 29.4 2.8 57 224-291 225-281 (448)
131 2wm1_A 2-amino-3-carboxymucona 23.4 91 0.0031 26.1 4.7 28 219-246 151-178 (336)
132 2bkf_A Zinc-finger protein NBR 22.4 95 0.0033 20.7 3.5 26 220-245 61-86 (87)
133 1qwg_A PSL synthase;, (2R)-pho 21.5 1.5E+02 0.0052 24.0 5.3 23 224-247 86-108 (251)
134 3nur_A Amidohydrolase; TIM bar 21.1 3E+02 0.01 23.4 7.5 29 219-247 169-197 (357)
135 3kru_A NADH:flavin oxidoreduct 20.9 76 0.0026 27.2 3.6 48 246-298 134-181 (343)
136 2q01_A Uronate isomerase; stru 20.6 90 0.0031 28.3 4.1 77 225-302 292-386 (497)
137 2nx9_A Oxaloacetate decarboxyl 20.6 4.5E+02 0.016 23.4 14.1 103 130-247 105-212 (464)
138 3qy7_A Tyrosine-protein phosph 20.4 87 0.003 25.5 3.8 13 131-143 26-38 (262)
139 4gbu_A NADPH dehydrogenase 1; 20.1 68 0.0023 28.1 3.2 46 246-298 163-210 (400)
140 4inf_A Metal-dependent hydrola 20.1 2.3E+02 0.0079 24.3 6.6 29 219-247 187-215 (373)
No 1
>4aql_A Guanine deaminase; hydrolase, purine metabolism; HET: TXC; 1.99A {Homo sapiens} PDB: 2uz9_A* 3e0l_A
Probab=100.00 E-value=2.3e-40 Score=306.56 Aligned_cols=283 Identities=19% Similarity=0.277 Sum_probs=238.3
Q ss_pred cccEEEEccEEEecCC-CCceeeeeeEEEeC-CEEEEecCChhhh---hhhcCCCceEEeC-CCCEeeccccccCccchh
Q 022028 18 SSTMILHNAVIVTMDK-ESRVFRNGGVFVVQ-DRIKAIGQSADIL---QQFSQMADQIIDL-QSQILLPGFVNTHVHTSQ 91 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~-~~~~~~~~~I~I~~-g~I~~i~~~~~~~---~~~~~~~~~vID~-~g~iv~PG~ID~H~Hl~~ 91 (304)
+..++|++..|.+... +..++++++|+|+| |||++|++..+++ ..++..+.++||+ +|++|+|||||+|+|+.+
T Consensus 30 ~~~~~~~g~~i~~~~~~~~~~~~~~~v~I~~~g~I~~vg~~~~~~~~~~~~~~~~~~viD~~~g~~v~PG~ID~H~H~~~ 109 (476)
T 4aql_A 30 PLAHIFRGTFVHSTWTCPMEVLRDHLLGVSDSGKIVFLEEASQQEKLAKEWCFKPCEIRELSHHEFFMPGLVDTHIHASQ 109 (476)
T ss_dssp -CCEEEEEEEEECCSSCSCEEEEEEEEEECTTSBEEEEEEGGGHHHHHHHTTCCGGGCEECCTTCEEEECEEEEEEEGGG
T ss_pred CccEEEEccEEecCCCCceeEecCcEEEEecCCeEEEecCcchhhhhhhhccCCCceEEEcCCCCEEeCCeeccccchHH
Confidence 3457889999987643 45678999999998 9999999875431 1122235689995 589999999999999999
Q ss_pred hhhhcccCCCCccccccccccCccCCCChHHHHHHHHHH-HHHHHhcCcceeecCCCCCHHH---HHHHHHHcCCeEEee
Q 022028 92 QLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLC-GIELIHSGVTCFAEAGGQHVSE---MAKAVELLGLRACLV 167 (304)
Q Consensus 92 s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~-~~~~l~~GvTtv~d~~~~~~~~---~~~~~~~~gir~~~~ 167 (304)
+.+||...+.++.+|+...+|+.+..+++++.+...... +.+++++||||+.++...+.+. +.+++.+.|+|.+++
T Consensus 110 ~~~rg~~~d~~l~~wL~~~~~p~e~~~~~~~~~~~~~~~~~~e~l~~G~Tt~~~~~~~~~~~~~~~~~a~~~~G~r~~~~ 189 (476)
T 4aql_A 110 YSFAGSSIDLPLLEWLTKYTFPAEHRFQNIDFAEEVYTRVVRRTLKNGTTTACYFATIHTDSSLLLADITDKFGQRAFVG 189 (476)
T ss_dssp GGGTTSCCCSCHHHHHHHTHHHHHHGGGSHHHHHHHHHHHHHHHHHTTEEEEEEECCSCHHHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHhcCCCHHHHHHHhhhhHHHhcCCHHHHHHHHHHHHHHHHHCCeeEEEEecccCchHHHHHHHHHHHhCCEEEEe
Confidence 999999999999999999999999888888766555444 5789999999999886555543 688899999999999
Q ss_pred cccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCCh
Q 022028 168 QSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIP 247 (304)
Q Consensus 168 ~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~ 247 (304)
+.+++.+... +. .....++.+++.++++++|....++++++.++|+.+++++++.++++.++|+++|+++++|++|+.
T Consensus 190 ~~~~d~~~~~-p~-~~~~~~~~l~~~~~~i~~~~~~~~~~v~~~l~p~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~ 267 (476)
T 4aql_A 190 KVCMDLNDTF-PE-YKETTEESIKETERFVSEMLQKNYSRVKPIVTPRFSLSCSETLMGELGNIAKTRDLHIQSHISENR 267 (476)
T ss_dssp CEECSCCSSC-TT-SCCCHHHHHHHHHHHHHHHHHHTCSSEEECBEECCTTTSCHHHHHHHHHHHHHTTCCEEEEESCSH
T ss_pred eccccCCCCC-cc-cccCHHHHHHHHHHHHHHHhcCCCCceEEEEeCCcCCcCCHHHHHHHHHHHHHcCCceEEEecCCH
Confidence 9988865322 23 344677888899999999876666889999999999999999999999999999999999999999
Q ss_pred hhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------ccccccccccc
Q 022028 248 YENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAVH 302 (304)
Q Consensus 248 ~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~~ 302 (304)
.+.+.+++.||...++++++++.|+++++++++||++++++|++ ||.||.++++.
T Consensus 268 ~e~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~H~~~l~~~~~~~l~~~g~~v~~~P~sn~~l~~g 333 (476)
T 4aql_A 268 DEVEAVKNLYPSYKNYTSVYDKNNLLTNKTVMAHGCYLSAEELNVFHERGASIAHCPNSNLSLSSG 333 (476)
T ss_dssp HHHHHHHHHCTTSSSHHHHHHTTTCCSTTEEEEECTTCCHHHHHHHHHHTCEEEECHHHHHHTTCC
T ss_pred HHHHHHHHHhCCCCCHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHcCCEEEECchhhhhhCcc
Confidence 99999999998733499999999999999999999999999987 99999998764
No 2
>4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO PSI-biology, NEW YORK structural genomics research consorti hydrolase; 2.00A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.3e-39 Score=299.53 Aligned_cols=273 Identities=26% Similarity=0.426 Sum_probs=236.9
Q ss_pred CcccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhc
Q 022028 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (304)
Q Consensus 17 ~~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g 96 (304)
++.+++|+|++|+++++...++++++|+|+||||++|++..+. .. ..+.++||++|++|+|||||+|+|+.++.++|
T Consensus 6 ~~~~~li~~~~v~~~~~~~~~~~~~~v~i~~g~I~~ig~~~~~-~~--~~~~~viD~~g~~v~PG~ID~H~H~~~~~~~g 82 (451)
T 4dyk_A 6 NPFDLLLLPTWIVPVEPAGVVLRDHALGIRDGQIALVAPREQA-MR--HGATEIRELPGMLLAPGLVNAHGHSAMSLFRG 82 (451)
T ss_dssp CCEEEEEEEEEECCSSSTTCCEESEEEEEETTEEEEEEEHHHH-TT--TCEEEEEEEEEEEEEECEEECCCCGGGGGGTT
T ss_pred chhcEEEECCEEEeeCCCCcEEeccEEEEECCEEEEEeCcccc-cc--CCCCeEEeCCCCEEeecccchhhChhhHHhcc
Confidence 4567899999999987666788999999999999999986643 11 23568999999999999999999999999999
Q ss_pred ccCCCCccccccccccCccC-CCChHHHHHHHHHHHHHHHhcCcceeecCCCCCHHHHHHHHHHcCCeEEeecccccCCC
Q 022028 97 IADDVDLMTWLHDRIWPYES-NMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGE 175 (304)
Q Consensus 97 ~~~~~~~~~~l~~~~~~~~~-~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~gir~~~~~~~~d~g~ 175 (304)
...+.++.+|+...+|+.+. .+++++.+..++.++.+++++||||++|+. ...+.+.+++.+.|+|.+++..+++..
T Consensus 83 ~~~~~~l~~wl~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~~~~~a~~~~g~r~~~~~~~~~~~- 160 (451)
T 4dyk_A 83 LADDLPLMTWLQDHIWPAEGQWVSEDFIRDGTELAIAEQVKGGITCFSDMY-FYPQAICGVVHDSGVRAQVAIPVLDFP- 160 (451)
T ss_dssp SSCSSCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEEEC-SCHHHHHHHHHHHTCEEEEEEEECSSC-
T ss_pred CCCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEcc-cCHHHHHHHHHHcCCeEEEEchhhCCC-
Confidence 98888999999988887765 488999999999999999999999999985 567788899999999999888777632
Q ss_pred CCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHH
Q 022028 176 GLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD 255 (304)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~ 255 (304)
.. .....++.++...++++.+.. .+.+++.++++.+++++++.+++++++|+++|+++++|+.|+..+.+.+.+
T Consensus 161 ---~~-~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~ 234 (451)
T 4dyk_A 161 ---IP-GARDSAEAIRQGMALFDDLKH--HPRIRIAFGPHAPYTVSDDKLEQILVLTEELDASIQMHVHETAFEVEQAME 234 (451)
T ss_dssp ---BT-TBSSHHHHHHHHHHHHHHTTT--CSSEEEEEEECCGGGSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHH
T ss_pred ---Cc-cccCHHHHHHHHHHHHHHhcC--CCceEEEEecCCCCccCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHH
Confidence 11 123456777778888888764 478999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------ccccccccccc
Q 022028 256 TRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAVH 302 (304)
Q Consensus 256 ~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~~ 302 (304)
.+|.. +++++.+.|++++++++.||+++++++++ ||.||.+++..
T Consensus 235 ~~g~~--~i~~~~~~g~~~~~~~~~H~~~~~~~~~~~l~~~g~~v~~~p~s~~~~~~~ 290 (451)
T 4dyk_A 235 RNGER--PLARLHRLGLLGPRFQAVHMTQVDNDDLAMLVETNSSVIHCPESNLKLASG 290 (451)
T ss_dssp HHSSC--HHHHHHHTTCCSTTEEEEECCCCCHHHHHHHHHHTCEEEECHHHHHHTTCC
T ss_pred HhCCC--HHHHHHHCCCCCCCeEEEECCCCCHHHHHHHHHcCCEEEEChhhhhhccCC
Confidence 99975 99999999999999999999999999987 99999988753
No 3
>4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV}
Probab=100.00 E-value=1.7e-39 Score=300.58 Aligned_cols=273 Identities=23% Similarity=0.373 Sum_probs=237.5
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcc
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~ 97 (304)
..+++|+|++|+++++...++++++|+|+||||++|++..+.+..++ +.++||++|++|+|||||+|+|+.++.++|.
T Consensus 13 ~~d~li~~~~v~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~--~~~viD~~g~~v~PGlID~H~Hl~~~~~~g~ 90 (472)
T 4dzh_A 13 PCDLLIEAGYVVPIEPHAVVLEDHAVAVSNGVIVAVLPTADARVRFA--PARTVSRPDAALMPGLVNAHTHNPMTLLRGV 90 (472)
T ss_dssp EEEEEEEEEEECCSSSTTCCEEEEEEEEETTEEEEEEEHHHHHHHEE--EEEEEEEEEEEEEECEEEEEECGGGGGGTTS
T ss_pred cCcEEEECCEEEecCCCCcEecceEEEEECCEEEEEeCchhhhhcCC--CCeEEeCCCcEEEECccccccChhhHHhccc
Confidence 35689999999998866678899999999999999998765432222 5689999999999999999999999999998
Q ss_pred cCCCCccccccccccCccC-CCChHHHHHHHHHHHHHHHhcCcceeecCCCCCHHHHHHHHHHcCCeEEeecccccCCCC
Q 022028 98 ADDVDLMTWLHDRIWPYES-NMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEG 176 (304)
Q Consensus 98 ~~~~~~~~~l~~~~~~~~~-~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~gir~~~~~~~~d~g~~ 176 (304)
..+.++.+|+...+|+.+. .+++++.+..++.++.+++++||||+.|++ ...+...+++.+.|+|.+++..+++..
T Consensus 91 ~~~~~l~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~~~~~a~~~~g~r~~~~~~~~~~~-- 167 (472)
T 4dzh_A 91 ADDLPLMVWLQQHIWPVEAAVIGPEFVADGTTLAIAEMLRGGTTCVNENY-FFADVQAAVYKQHGFRALVGAVIIDFP-- 167 (472)
T ss_dssp SCSCCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEEEC-SCHHHHHHHHHHTTCEEEEEEEECSSC--
T ss_pred cCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEcc-cCHHHHHHHHHHhCCeEEEEecccCCC--
Confidence 8889999999988887754 488999999999999999999999999987 567788899999999998887766532
Q ss_pred CCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHh
Q 022028 177 LPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDT 256 (304)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~ 256 (304)
.. .....++.++..+++++.+.. .+.+++.++++.+++++++.+++++++|+++|+++++|+.|+..+.+.+.+.
T Consensus 168 --~~-~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~iH~~e~~~~~~~~~~~ 242 (472)
T 4dzh_A 168 --TA-WASSDDEYFARAGELHDQWRD--DPLISTAFAPHAPYTVNDANFERVRMLADQLDMPVHLHTHETAQEVADSVAQ 242 (472)
T ss_dssp --CS-SCSSHHHHHHHHHHHHHHHTT--CSSEEEEEEECCTTTSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHH
T ss_pred --cc-cccCHHHHHHHHHHHHHHhCC--CCceEEEEecCCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH
Confidence 22 223466777888888888865 4789999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------ccccccccccc
Q 022028 257 RKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAVH 302 (304)
Q Consensus 257 ~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~~ 302 (304)
+|.. +++++.+.|++++++++.||+++++++++ ||.||.+++..
T Consensus 243 ~g~~--~i~~~~~~g~~~~~~~~~H~~~l~~~~i~~l~~~g~~v~~~p~s~~~~~~~ 297 (472)
T 4dzh_A 243 YGQR--PLARLDRLGLVNDRLIAVHMTQLTEAEIHLCAERGVSVVHCPESNLKLASG 297 (472)
T ss_dssp HSSC--HHHHHHHHTCCSTTEEEEECCSCCHHHHHHHHHHTCEEEECHHHHHHTTCC
T ss_pred hCCC--HHHHHHHcCCCCCCeEEEeccCCCHHHHHHHHHcCCEEEEChHHHHhcCCC
Confidence 9975 99999999999999999999999999987 99999988754
No 4
>3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica}
Probab=100.00 E-value=9.9e-39 Score=295.11 Aligned_cols=273 Identities=25% Similarity=0.411 Sum_probs=234.8
Q ss_pred cccEEEEccEEEecCCCC------ceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchh
Q 022028 18 SSTMILHNAVIVTMDKES------RVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQ 91 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~------~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~ 91 (304)
+++++|+|++|+++++.. .++++++|+|+||||++|++..+. ...+.++||++|++|+|||||+|+|+.+
T Consensus 22 ~~~~li~~~~v~~~~~~~~~~~~~~~~~~~~v~i~~g~I~~vg~~~~~----~~~~~~viD~~g~~v~PGlID~H~H~~~ 97 (468)
T 3lnp_A 22 HADLRINSHWIIPIENTTDHNLVSNILIDHCLLIKDGIILAIEPQSSC----QIPATETLDLGQQVLMPGWVNAHGHAAM 97 (468)
T ss_dssp CEEEEEEEEEECCSSCC-----CCSCEEEEEEEEETTEEEEEEETTTC----CCCEEEEEECCSEEEEECEEECSCCGGG
T ss_pred cccEEEECCEEEeecCCcccccCccEecceEEEEECCEEEEEeCCccc----cCCCCeEEeCCCcEEEeCeechhhChhh
Confidence 456899999999988665 678999999999999999986541 1235689999999999999999999999
Q ss_pred hhhhcccCCCCccccccccccCccC-CCChHHHHHHHHHHHHHHHhcCcceeecCCCCCHHHHHHHHHHcCCeEEeeccc
Q 022028 92 QLAKGIADDVDLMTWLHDRIWPYES-NMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQST 170 (304)
Q Consensus 92 s~~~g~~~~~~~~~~l~~~~~~~~~-~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~gir~~~~~~~ 170 (304)
+.++|...+.++.+|+...+|+.+. .+++++.+..++.++.+++++||||+.|+. ...+.+.+++.+.|+|.+++..+
T Consensus 98 ~~~~g~~~~~~l~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~~~~~~~~~~g~r~~~~~~~ 176 (468)
T 3lnp_A 98 SLFRGLADDLPLMTWLQEHVWPAEAQHVDEHFVKQGTELAIAEMIQSGTTTFADMY-FYPQQSGEAALAAGIRAVCFAPV 176 (468)
T ss_dssp GGGTTSSCSCCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEECC-SCHHHHHHHHHHHTCEEEEEEEE
T ss_pred hhhccCcCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEcc-cCHHHHHHHHHHcCCeEEEeccc
Confidence 9999988888999999988887655 488899999999999999999999999986 55677888999999999888777
Q ss_pred ccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCC---CCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCCh
Q 022028 171 MDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAA---DGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIP 247 (304)
Q Consensus 171 ~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~ 247 (304)
++.. .. .....++.++..+++++.+.... .+.+++.++++.++.++++.+++++++|+++|+++++|+.|+.
T Consensus 177 ~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~ 251 (468)
T 3lnp_A 177 LDFP----TN-YAQNADEYIRKAIECNDRFNNHPMNEQGLVQIGFGPHAPYTVSDEPLKEITMLSDQLDMPVQIHLHETD 251 (468)
T ss_dssp CSSC----CS-SCSSHHHHHHHHHHHHHHHHSCGGGTTCCEEEEEEECCTTTSCHHHHHHHHHHHHHHTCCEEEEESCSH
T ss_pred cCCC----cc-cccCHHHHHHHHHHHHHHhhcCCcccCceEEEEEEcCCCCCCCHHHHHHHHHHHHHcCCcEEEEeCCCH
Confidence 6532 11 12346677788888888887643 4588999999999999999999999999999999999999999
Q ss_pred hhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------ccccccccccc
Q 022028 248 YENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAVH 302 (304)
Q Consensus 248 ~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~~ 302 (304)
.+.+.+.+.+|.. +++++++.|++++++++.||+++++++++ ||.+|.+++..
T Consensus 252 ~~~~~~~~~~g~~--~i~~~~~~g~l~~~~~~~H~~~~~~~~~~~l~~~g~~v~~~p~s~~~~~~~ 315 (468)
T 3lnp_A 252 FEVSESLETFNKR--PTQRLADIGFLNERVSCVHMTQVDDGDIKILQKTGASIIHCPESNLKLASG 315 (468)
T ss_dssp HHHHHHHHHHSSC--HHHHHHHTTCCSTTEEEEECCSCCHHHHHHHHHHCCEEEECHHHHHHTTCC
T ss_pred HHHHHHHHHhCCC--HHHHHHHcCCCCCCeEEEeccCCCHHHHHHHHhcCCEEEEChhhhhhcCCC
Confidence 9999999989985 99999999999999999999999999987 99999888754
No 5
>4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A*
Probab=100.00 E-value=1.1e-38 Score=293.06 Aligned_cols=273 Identities=24% Similarity=0.352 Sum_probs=234.0
Q ss_pred CcccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhc
Q 022028 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (304)
Q Consensus 17 ~~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g 96 (304)
|+.+++|+|++|+++++...++.+++|+|+||||++|++..+.+ . ..+.++||++|++|+|||||+|+|+.++.++|
T Consensus 4 ~~~~~li~~~~v~~~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~-~--~~~~~viD~~g~~v~PGlID~H~Hl~~~~~~g 80 (447)
T 4f0r_A 4 SRYEKIISARWIITVETDGEVLENHAIAIRDGKIAAIIPAADAA-G--LEADERLELPDHVLMPGLINLHGHSAMSLLRG 80 (447)
T ss_dssp -CEEEEEEEEEEECCSSTTCEEEEEEEEEETTEEEEEEEHHHHT-T--SCEEEEEEEEEEEEEECEEEEEECGGGGGGTT
T ss_pred CcccEEEECCEEEeeCCCCcEeeceEEEEECCEEEEEecccccc-c--CCCCeEEeCCCcEEeeCccchhhChhhHhhcc
Confidence 55678999999999887667889999999999999999876532 1 23568999999999999999999999999999
Q ss_pred ccCCCCccccccccccCccC-CCChHHHHHHHHHHHHHHHhcCcceeecCCCCCHHHHHHHHHHcCCeEEeecccccCCC
Q 022028 97 IADDVDLMTWLHDRIWPYES-NMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGE 175 (304)
Q Consensus 97 ~~~~~~~~~~l~~~~~~~~~-~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~gir~~~~~~~~d~g~ 175 (304)
...+.++.+|+...+|+.+. .+++++.+..++.++.+++++||||+.++. ...+...+++.+.|+|.+++..+.+..
T Consensus 81 ~~~~~~~~~wl~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~~~~~~~~~~g~r~~~~~~~~~~~- 158 (447)
T 4f0r_A 81 LADDKALMDWLTNYIWPTEGKHVHDDFVFDGSLLAMGEMIRGGTTTINDMY-FYNAAVARAGLASGMRTFVGCSILEFP- 158 (447)
T ss_dssp SSCSSCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEECB-SCHHHHHHHHHHHTCEEEEEEEECSSC-
T ss_pred CCCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEcc-cCHHHHHHHHHHcCCeEEEEchhcCCC-
Confidence 88888999999988887654 478999999999999999999999999986 557778888999999998887766532
Q ss_pred CCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHH
Q 022028 176 GLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD 255 (304)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~ 255 (304)
.. .....++.++..+++++++.. .+.+++.++++.++.++++.+++++++|+++|+++++|+.|+..+.+.+.+
T Consensus 159 ---~~-~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~iH~~~~~~~~~~~~~ 232 (447)
T 4f0r_A 159 ---TN-YASNADDYIAKGMAERSQFLG--EDLLTFTLAPHAPYTVSDDTFRKVVTLAEQEDMLIHCHIHETADEVNNSVK 232 (447)
T ss_dssp ---CS-SCSSHHHHHHHHHHHHHTTTT--CTTEEEEEEECCGGGSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHH
T ss_pred ---cc-cccCHHHHHHHHHHHHHHhcC--CCceEEEEecCCCCCCCHHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHH
Confidence 11 123456777777788777653 478899999999999999999999999999999999999999988999998
Q ss_pred hcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------ccccccccccc
Q 022028 256 TRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAVH 302 (304)
Q Consensus 256 ~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~~ 302 (304)
.+|.. +++++++.|+++++.++.||+++++++++ ||.+|.+++..
T Consensus 233 ~~g~~--~i~~~~~~g~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~ 288 (447)
T 4f0r_A 233 EHGQR--PLARLQRLGLLSPRLVAAHMVHLNDAEVELAARHGLSTAHNPASNMKLASG 288 (447)
T ss_dssp HHSSC--HHHHHHHHTCCSTTEEEEECCSCCHHHHHHHHHHTCEEEECHHHHHHTTCC
T ss_pred HcCCC--HHHHHHHcCCCCCCcEEEeccCCCHHHHHHHHHcCCEEEECchhhhhcCCC
Confidence 89885 99999999999999999999999999887 99999887653
No 6
>3h4u_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified} PDB: 3hpa_A
Probab=100.00 E-value=1.7e-38 Score=294.45 Aligned_cols=278 Identities=24% Similarity=0.449 Sum_probs=222.5
Q ss_pred cccEEEEccEE-EecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhc
Q 022028 18 SSTMILHNAVI-VTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (304)
Q Consensus 18 ~~~~li~~~~i-i~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g 96 (304)
|++++|+|+++ +++++...++++++|+|+||||++|++..+.+ ..+.++||++|++|+|||||+|+|+.++.+++
T Consensus 28 m~~~li~n~~vv~t~d~~~~~~~~~~V~I~~g~I~~Vg~~~~~~----~~~~~viD~~g~~v~PGlID~H~Hl~~~~~rg 103 (479)
T 3h4u_A 28 PKTLLVKHADVLVTMDDTRRELRDAGLYIEDNRIVAVGPSAELP----ETADEVLDLRGHLVIPGLVNTHHHMYQSLTRA 103 (479)
T ss_dssp -CEEEEEEEEEEECCCTTCCEEEEEEEEEETTEEEEEEEGGGSC----SCCSEEEECTTEEEEECEEECCCCGGGGGSCS
T ss_pred hhhheeECCeEEEeeCCCCceecccEEEEECCEEEEEeCCcccC----CCCCeEEeCCCCEEecceeecccccchhhhcc
Confidence 56789999985 56665567889999999999999999876432 23578999999999999999999999999988
Q ss_pred ccC--CCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC-----CHHHHHHHHHHcCCeEEeecc
Q 022028 97 IAD--DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-----HVSEMAKAVELLGLRACLVQS 169 (304)
Q Consensus 97 ~~~--~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~-----~~~~~~~~~~~~gir~~~~~~ 169 (304)
... +.++.+|+... ++.+..+++++++..++.++.+++++||||+.+++.. ..+...+++.+.|+|.+++..
T Consensus 104 ~~~~~~~~l~~~l~~~-~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~g~r~~~~~~ 182 (479)
T 3h4u_A 104 VPAAQNAELFGWLTNL-YKIWAHLTPEMIEVSTLTAMAELLQSGCTTSSDHLYIYPNGSRLDDSIGAAQRIGMRFHASRG 182 (479)
T ss_dssp CTTTTTCCHHHHHHHH-HHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEECCBCCCCTTCCHHHHHHHHHHHTCEEEEEEE
T ss_pred ccccCCCCHHHHHHHh-hhhhhhCCHHHHHHHHHHHHHHHHhCCeEEEEECccccCCcchHHHHHHHHHHcCCEEEEEee
Confidence 765 78899999875 6666779999999999999999999999999997422 245678889999999988776
Q ss_pred cccCCC---CCCCCcccCChHHHHHHHHHHHHHHcCCC-CCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecC
Q 022028 170 TMDCGE---GLPASWAVRTTDDCIQSQKELYAKHHHAA-DGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAE 245 (304)
Q Consensus 170 ~~d~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E 245 (304)
.++.+. ++++.......++.++..+++++.+.... .+++++.++++.+++++++.+++++++|+++|+++++|+.|
T Consensus 183 ~~~~~~~~g~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~e 262 (479)
T 3h4u_A 183 AMSVGQRDGGLPPDSVVEREPDILRDTQRLIETYHDEGRYAMLRVVVAPCSPFSVSRDLMRDAAVLAREYGVSLHTHLAE 262 (479)
T ss_dssp ECC----------------CHHHHHHHHHHHHHHCCCSTTCSEEEEEEESCTTSSCHHHHHHHHHHHHHHTCEEEEEESC
T ss_pred ecccccccccCCcccccccHHHHHHHHHHHHHHhhccCCCCceEEEEecCCCCCCCHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 655321 12233333345677778888888887643 46889999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------ccccccccccc
Q 022028 246 IPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAVH 302 (304)
Q Consensus 246 ~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~~ 302 (304)
+..+.+.+.+.+|.+ +++++.+.|++++++++.||+++++++++ ||.||.+++..
T Consensus 263 ~~~~~~~~~~~~g~~--~~~~~~~~g~~~~~~~i~H~~~~~~~~~~~l~~~g~~v~~~p~s~~~l~~~ 328 (479)
T 3h4u_A 263 NVNDIAYSREKFGMT--PAEYAEDLGWVGHDVWHAHCVQLDDAGIGLFARTGTGVAHCPCSNMRLASG 328 (479)
T ss_dssp SHHHHHC-------C--HHHHHHHTTCCSTTEEEEECTTCCHHHHHHHHHHTCEEEECHHHHHHTTCC
T ss_pred CHHHHHHHHHHcCCC--HHHHHHHcCCCCCCeEEEEecCCCHHHHHHHHHcCCeEEEChhHhhhcCCC
Confidence 999999999999985 99999999999999999999999999987 99999988754
No 7
>3ls9_A Triazine hydrolase; atrazine chlorohydrolase TRZN; 1.40A {Arthrobacter aurescens} PDB: 3lsc_A* 3lsb_A*
Probab=100.00 E-value=1.4e-37 Score=286.39 Aligned_cols=273 Identities=20% Similarity=0.292 Sum_probs=230.7
Q ss_pred EEEEcc-EEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccC
Q 022028 21 MILHNA-VIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (304)
Q Consensus 21 ~li~~~-~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~ 99 (304)
++|+|+ .|+++++...++++++|+|+||||++|++..+. +.+.++||++|++|+|||||+|+|+.++.+||..+
T Consensus 2 ~li~n~~~v~t~d~~~~~~~~~~v~i~~g~I~~vg~~~~~-----~~~~~viD~~g~~v~PG~ID~H~H~~~~~~~g~~~ 76 (456)
T 3ls9_A 2 ILIRGLTRVITFDDQERELEDADILIDGPKIVAVGKDLSD-----RSVSRTIDGRGMIALPGLINSHQHLYEGAMRAIPQ 76 (456)
T ss_dssp EEEEEEEEEECCCTTCCEEEEEEEEEETTEEEEEESSCCC-----TTCSEEEECTTEEEEECEEEEEECGGGGGGBTCGG
T ss_pred EEEEcCcEEEEcCCCCceeccceEEEECCEEEEeCCCCCC-----CCCCeEEeCCCCEEecCeeecccccchhhhccccc
Confidence 689999 888888767788999999999999999987431 23578999999999999999999999999998754
Q ss_pred --CCCcccccccc------ccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC--------CCHHHHHHHHHHcCCe
Q 022028 100 --DVDLMTWLHDR------IWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--------QHVSEMAKAVELLGLR 163 (304)
Q Consensus 100 --~~~~~~~l~~~------~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~--------~~~~~~~~~~~~~gir 163 (304)
+.++.+|+... +++. ..+++++++..++.++.+++++||||+.++.. ...+...+++.+.|+|
T Consensus 77 ~~~~~l~~~l~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~a~~~~g~r 155 (456)
T 3ls9_A 77 LERVTMASWLEGVLTRSAGWWRD-GKFGPDVIREVARAVLLESLLGGITTVADQHLFFPGATADSYIDATIEAATDLGIR 155 (456)
T ss_dssp GSSCCHHHHHHHHHHHHHHHHHT-TSSSHHHHHHHHHHHHHHHHHTTEEEEEEEECCCCSSSCCTHHHHHHHHHHHHTCE
T ss_pred CCCCCHHHHHHHhcccccccccc-ccCCHHHHHHHHHHHHHHHHhCCeeEEEeccccccCcccchhHHHHHHHHHHcCCE
Confidence 78899999876 3332 26899999999999999999999999998732 1234568889999999
Q ss_pred EEeecccccCC---CCCCCCcccCChHHHHHHHHHHHHHHcCC-CCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCee
Q 022028 164 ACLVQSTMDCG---EGLPASWAVRTTDDCIQSQKELYAKHHHA-ADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGI 239 (304)
Q Consensus 164 ~~~~~~~~d~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~ 239 (304)
.+++...++.+ .+.++........+.++...++++.+... ..+.+.+.++++++++++++.+++++++|+++|+++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v 235 (456)
T 3ls9_A 156 FHAARSSMTLGKSEGGFCDDLFVEPVDRVVQHCLGLIDQYHEPEPFGMVRIALGPCGVPYDKPELFEAFAQMAADYDVRL 235 (456)
T ss_dssp EEEEECCCCCCGGGTCSSCGGGCCCHHHHHHHHHHHHHHHCCCSTTCSEEEEECCCCTTTSCHHHHHHHHHHHHHHTCEE
T ss_pred EEEEccccccccccccCCccccccCHHHHHHHHHHHHHHhhCcCCCCceEEEEecCCCCCCCHHHHHHHHHHHHHCCCCE
Confidence 98877766542 12344444456677888888999998762 357889999999999999999999999999999999
Q ss_pred eEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------ccccccccccc
Q 022028 240 HMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAVH 302 (304)
Q Consensus 240 ~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~~ 302 (304)
++|+.|+..+ +.+.+.+|.+ +++++.+.|++++++.+.||+++++++++ ||.||.+++..
T Consensus 236 ~~H~~e~~~~-~~~~~~~~~~--~~~~~~~~g~~~~~~~i~H~~~~~~~~~~~l~~~g~~~~~~p~s~~~l~~~ 306 (456)
T 3ls9_A 236 HTHFYEPLDA-GMSDHLYGMT--PWRFLEKHGWASDRVWLAHAVVPPREEIPEFADAGVAIAHLIAPDLRMGWG 306 (456)
T ss_dssp EEEECCTTHH-HHHHHHHSSC--HHHHHHHTTCSSTTEEEEECCSCCGGGHHHHHHHTCEEEECHHHHHHTTCC
T ss_pred EEEeCCCchH-HHHHHHhCCC--HHHHHHHcCCCCCCcEEEeccCCCHHHHHHHHHcCCEEEEChhHHhhcCCC
Confidence 9999999998 8999999985 99999999999999999999999999987 99999988754
No 8
>3v7p_A Amidohydrolase family protein; iron binding site, enzyme functio initiative, EFI; HET: TLA; 1.35A {Nitratiruptor SP}
Probab=100.00 E-value=8e-37 Score=279.22 Aligned_cols=265 Identities=19% Similarity=0.256 Sum_probs=212.3
Q ss_pred EEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCC
Q 022028 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (304)
Q Consensus 21 ~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~ 100 (304)
++|+|++|+++++ ++++++|+| ||||++|++..+.+..++ +.++||++|++|+|||||+|+|+.++.+||....
T Consensus 2 ~~i~~~~v~~~~~---~~~~~~v~i-~g~I~~Vg~~~~~~~~~~--~~~vid~~g~~v~PGlId~H~H~~~~~~rg~~~~ 75 (427)
T 3v7p_A 2 RIIKPFAILTPQT---IIQDKAVAF-DKKIEAIDTVENLIKKYP--NAAVEHDENSLLLPGFANPHLHLEFSANKATLQY 75 (427)
T ss_dssp EEEEEEEEECSSS---EEESCEEEE-SSBEEEEECHHHHHHHCT--TSEEEEEEEEEEEECEEEEEECGGGTTCSSCSCC
T ss_pred EEEECCEEEcCCC---EEeCcEEEE-CCEEEEecChhhhccccC--CceEEeCCCCEEecCEeecccCcchhhccccccc
Confidence 5799999999873 788999999 999999998765443333 5689999999999999999999999999998888
Q ss_pred CCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCCCHHHHHHHHHHcCCeEEeecccccCCCCCCCC
Q 022028 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPAS 180 (304)
Q Consensus 101 ~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~ 180 (304)
.++.+|+...+++... +++++.+..++.++.+++++||||+.|+.... ...+++.+.|+|.+++...++.. +.
T Consensus 76 ~~l~~wl~~~~~~~~~-~~~~~~~~~~~~~~~e~l~~GvTtv~d~~~~~--~~~~a~~~~Gir~~~~~~~~~~~----~~ 148 (427)
T 3v7p_A 76 GDFIPWLYSVIRHRED-LLPLCDGACLEQTLSSIIQTGTTAIGAISSYG--EDLQACIDSALKVVYFNEVIGSN----AA 148 (427)
T ss_dssp SSHHHHHHHHHHHHHH-HHHHSCHHHHHHHHHHHHHTTEEEEEEEESSS--TTHHHHHHBSSEEEEEEEECBCC----GG
T ss_pred CCHHHHHHHHHHhHHh-cCHHHHHHHHHHHHHHHHHhCCEEEEEecCcH--HHHHHHHhcCCeEEEeccccCCC----hh
Confidence 8999999988776653 55677888889999999999999999986432 23688899999998877665422 11
Q ss_pred cccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCC-
Q 022028 181 WAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKV- 259 (304)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~- 259 (304)
...+.+++..+.++.+....++.+++.++++++++++++.++.+.++|+++|+++++|++|+..+.+.+++.+|.
T Consensus 149 ----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~E~~~e~~~~~~~~g~~ 224 (427)
T 3v7p_A 149 ----TADVMYASFLERFHQSKKHENERFKAAVAIHSPYSVHYILAKRALDIAKKYGSLVSVHFMESRAEREWLDKGSGEF 224 (427)
T ss_dssp ----GHHHHHHHHHHHHHHHHTTCBTTEEEEEEECCTTTBCHHHHHHHHHHHHHHTCCEEEEESCSHHHHHHHHHSCSHH
T ss_pred ----hhhHHHHHHHHHHHHhhhccCCceEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHhcCcc
Confidence 123344445555555555556789999999999999999999999999999999999999999999999887661
Q ss_pred ---------CCCHHHHHHH-hCC-CCCCeeEEEeccCCcchhc-----------ccccccccccc
Q 022028 260 ---------DHGTVTFLDK-IEF-LQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAVH 302 (304)
Q Consensus 260 ---------~~~~~~~l~~-~g~-l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~~ 302 (304)
..++++.+.+ +++ ++++++++||++++++|++ ||.||.++++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~H~~~~~~~~~~~l~~~g~~~~~~p~s~~~~~~~ 289 (427)
T 3v7p_A 225 AKFFKEFLNQTRPVNDTKSFLELFKELHTLFVHMVWANEEEIQTIASYNAHIIHCPISNRLLGNG 289 (427)
T ss_dssp HHHHHHHTCCCSCSSCHHHHHHTTTTSEEEEEECTTCCHHHHHHHHHSEEEEEECHHHHHHTTCC
T ss_pred hhhhhhhccCCCcccCHHHHHhhhcCCCEEEEECCCCCHHHHHHHHHcCCEEEECHHHHHHhcCC
Confidence 1123333333 455 7899999999999999987 99999988764
No 9
>4f0l_A Amidohydrolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Brucella melitensis biovar abortus}
Probab=100.00 E-value=2.6e-36 Score=278.24 Aligned_cols=266 Identities=15% Similarity=0.143 Sum_probs=214.3
Q ss_pred CCcccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhh
Q 022028 16 GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAK 95 (304)
Q Consensus 16 ~~~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~ 95 (304)
++|..++++|+.+. + ..+++++|+|+||||++|++..+ .++||++|++|+|||||+|+|+.++.+|
T Consensus 9 ~~m~~l~~~~~~~~--~---~~~~~~~v~I~~g~I~~Ig~~~~---------~~~iD~~g~~v~PGlID~H~H~~~~~~r 74 (458)
T 4f0l_A 9 SSQHFIHARQALLP--D---GWAENVRIGIAGGVICSIETGVL---------AGPDDERQSVVVAGMANLHSHAFQYGMA 74 (458)
T ss_dssp --CEEEEEEEEEET--T---EEEEEEEEEEETTEEEEEECSCC---------CCTTCEEEEEEEECEEEEEECGGGGGGT
T ss_pred cchhHhhhcceecc--C---ccccCceEEEECCEEEEEeCCCc---------cccccCCCCEEccCceecccchhhhhhc
Confidence 34556777887663 2 46789999999999999998642 2468999999999999999999999999
Q ss_pred cccC-----CCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC--------------CHHHHHHH
Q 022028 96 GIAD-----DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------------HVSEMAKA 156 (304)
Q Consensus 96 g~~~-----~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~--------------~~~~~~~~ 156 (304)
|... +.++.+|+. .+|+....+++++.+..++.++.+++++||||+.|+... ..+...++
T Consensus 75 g~~~~~~~~~~~~~~w~~-~~~~~~~~~~~e~~~~~~~~~~~e~l~~GvTtv~d~~~~~~~~~g~~~~~~~~~~~~~~~a 153 (458)
T 4f0l_A 75 GLAERRGPSADSFWSWRE-IMYKFALTMTPEQAEAVALRLYVDMLEAGFTRVGEFHYLHHDCDGTPYANLSEMADRIAAA 153 (458)
T ss_dssp TSSCBCCSCSSTTHHHHH-HHHHHHHHCCHHHHHHHHHHHHHHHHHTTEEEEEEEECCCSCTTSCCCSSTTHHHHHHHHH
T ss_pred ccccccccCCCcHHHHHH-HhhhhhhhCCHHHHHHHHHHHHHHHHhcCCcEEEeeeeeccccccccccchhhhHHHHHHH
Confidence 8765 678889975 467777779999999999999999999999999985321 14577889
Q ss_pred HHHcCCeEEeecccccCCC--CCCCC----cccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHH
Q 022028 157 VELLGLRACLVQSTMDCGE--GLPAS----WAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRD 230 (304)
Q Consensus 157 ~~~~gir~~~~~~~~d~g~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~ 230 (304)
+.+.|+|.+++..+++.+. +.++. ......++.++..+++.+.+.. .+.+.++++++++++++++.++.+.+
T Consensus 154 ~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~ 231 (458)
T 4f0l_A 154 ATTAGMGLTLLPVFYAHSGFGGAAANEGQRRFINDPERFARLIEGCRKTLEG--FEGAVLGVAPHSLRAVTPDELDSVTQ 231 (458)
T ss_dssp HHHHTCEEEEEEEECCEEETTTEECCGGGTTTCCCHHHHHHHHHHHHHHHTT--CTTCEECBEECBTTTSCHHHHHHHTT
T ss_pred HHHcCCeEEEecchhccccccccCCchhhhhhhcCHHHHHHHHHHHHHHhcc--CCceEEEEecCCcCcCCHHHHHHHHH
Confidence 9999999988766654221 01111 1123445555555566665543 35778889999999999999999999
Q ss_pred HHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------cccccccc
Q 022028 231 MAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKY 299 (304)
Q Consensus 231 ~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l 299 (304)
+|+ ++++++|++|+..+.+.+.+.+|.+ +++++.+.|+++++++++||++++++|++ ||.||.++
T Consensus 232 ~a~--g~~v~~H~~e~~~~~~~~~~~~g~~--~~~~l~~~g~l~~~~~~~H~~~~~~~~~~~l~~~g~~~~~~p~s~~~l 307 (458)
T 4f0l_A 232 LLP--DAPVHIHVAEQVKEVEDCIAWSGKR--PVEWLLDHQDVTARWCLIHATHMSDEETKHMAKAGAIAGLCPVTEANL 307 (458)
T ss_dssp SST--TSCEEEEESCSHHHHHHHHHHHSSC--HHHHHHHHSCCCTTEEEEECCSCCHHHHHHHHHHTCEEEECHHHHHHT
T ss_pred Hhc--CCCEEEEeCCCHHHHHHHHHHhCCC--HHHHHHHcCCCCCCeEEEEeccCCHHHHHHHHHcCCeEEECccccccc
Confidence 998 9999999999999999999999985 99999999999999999999999999987 99999998
Q ss_pred ccc
Q 022028 300 AVH 302 (304)
Q Consensus 300 ~~~ 302 (304)
++.
T Consensus 308 ~~~ 310 (458)
T 4f0l_A 308 GDG 310 (458)
T ss_dssp TCC
T ss_pred cCC
Confidence 764
No 10
>3mdu_A N-formimino-L-glutamate iminohydrolase; amonohydralase family, N-formimino-L-glutamate iminohydrolas guanidino-L-glutamate; HET: NGQ; 1.40A {Pseudomonas aeruginosa} PDB: 3mdw_A*
Probab=100.00 E-value=1.3e-35 Score=273.21 Aligned_cols=261 Identities=18% Similarity=0.215 Sum_probs=212.0
Q ss_pred EEccEEEecCCCCceeeeeeEEE-eCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccC--
Q 022028 23 LHNAVIVTMDKESRVFRNGGVFV-VQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD-- 99 (304)
Q Consensus 23 i~~~~ii~~~~~~~~~~~~~I~I-~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~-- 99 (304)
+...+++..+ .++++++|.| +||+|++|++..++ .+++|++| +|+|||||+|+|+.++.+||...
T Consensus 4 ~~~~~~~~~~---~~~~~~~v~i~~~g~I~~ig~~~~~--------~~~~d~~g-~v~PGfId~H~H~~~~~~rg~~~~~ 71 (453)
T 3mdu_A 4 IFAERALLPE---GWARNVRFEISADGVLAEIRPDANA--------DGAERLGG-AVLPGMPNLHSHAFQRAMAGLAEVA 71 (453)
T ss_dssp EEEEEEEETT---EEEEEEEEEECTTSBEEEEESSCCC--------TTSEECSS-CEEECEEEEEECGGGGGGTTTTCCC
T ss_pred cchhheecCC---ceecCeEEEEecCCEEEEecCCCCc--------ccccccCC-cccccceecccchHHHhhccccccc
Confidence 3455566544 4788999999 89999999987531 23579999 99999999999999999999764
Q ss_pred ---CCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCCC--------------HHHHHHHHHHcCC
Q 022028 100 ---DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH--------------VSEMAKAVELLGL 162 (304)
Q Consensus 100 ---~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~--------------~~~~~~~~~~~gi 162 (304)
+.+|.+|+. .+|+....+++++++..++.++.+++++||||+.++...+ .+.+++++++.|+
T Consensus 72 ~~~~~~l~~wl~-~~~~~~~~~~~e~~~~~a~~~~~e~l~~GvTtv~d~~~~~~~~~g~~~~~~~~~~~~~~~a~~~~Gi 150 (453)
T 3mdu_A 72 GNPNDSFWTWRE-LMYRMVARLSPEQIEVIACQLYIEMLKAGYTAVAEFHYVHHDLDGRSYADPAELSLRISRAASAAGI 150 (453)
T ss_dssp SSTTCCHHHHHH-HHHHHHTTCCHHHHHHHHHHHHHHHHHHTEEEEEEEECCCSCTTSCCCSSTTHHHHHHHHHHHHHTC
T ss_pred cCCCCcHHHHHH-HHhhhhhhCCHHHHHHHHHHHHHHHHHcCCcEEEEeeEeccccccccccchhhHHHHHHHHHHHhCC
Confidence 467899975 4678888899999999999999999999999999853211 3577889999999
Q ss_pred eEEeecccccCCC-C-CCCCc----ccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhC
Q 022028 163 RACLVQSTMDCGE-G-LPASW----AVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFK 236 (304)
Q Consensus 163 r~~~~~~~~d~g~-~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~ 236 (304)
|.+++..+++.+. + .++.. .....+..++..+++.+.+... +. .+.++|+++++++++.+++++++|+ +|
T Consensus 151 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~p~~~~~~~~e~l~~~~~~A~-~g 226 (453)
T 3mdu_A 151 GLTLLPVLYSHAGFGGQPASEGQRRFINGSEAYLELLQRLRAPLEAA--GH-SLGLCFHSLRAVTPQQIATVLAAGH-DD 226 (453)
T ss_dssp EEEEEECBCCBSSTTTCBCCGGGGGGCCCHHHHHHHHHHHHHHHHHH--TC-EECEEEEETTTSCHHHHHHHHTSSC-TT
T ss_pred eEEEecchhccccccCCCCchhhhhccCCHHHHHHHHHHHHHHhhcC--CC-eEEEecCCCCcCCHHHHHHHHHHHh-cC
Confidence 9998876665421 1 12221 1234556666566666555432 34 7788999999999999999999999 99
Q ss_pred CeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------ccccccccccc
Q 022028 237 TGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAVH 302 (304)
Q Consensus 237 ~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~~ 302 (304)
+++++|++|+..+.+.+.+.+|.+ +++++.+.|+++++++++||++++++|++ ||.||.++++.
T Consensus 227 ~~v~~H~~e~~~e~~~~~~~~g~~--~v~~l~~~g~~~~~~~~~H~~~~~~~~i~~la~~g~~v~~~P~sn~~lg~g 301 (453)
T 3mdu_A 227 LPVHIHIAEQQKEVDDCQAWSGRR--PLQWLYENVAVDQRWCLVHATHADPAEVAAMARSGAVAGLCLSTEANLGDG 301 (453)
T ss_dssp SCEEEEESCSHHHHHHHHHHHSSC--HHHHHHHHSCCCTTEEEEECCSCCHHHHHHHHHHTCEEEECHHHHHHTTCC
T ss_pred CCEEEEeCCCHHHHHHHHHHhCCC--HHHHHHHcCCCCCCeEEEEcCCCCHHHHHHHHHcCCEEEECchhHhhcCCC
Confidence 999999999999999999999985 99999999999999999999999999987 99999998864
No 11
>2i9u_A Cytosine/guanine deaminase related protein; protein structure initiative II (PSI-II), amidohydrol guanine deaminase; HET: GUN; 2.05A {Clostridium acetobutylicum} SCOP: b.92.1.4 c.1.9.9
Probab=100.00 E-value=2.4e-33 Score=257.04 Aligned_cols=276 Identities=20% Similarity=0.292 Sum_probs=213.3
Q ss_pred cccEEEEccEEEecCC-CCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhc
Q 022028 18 SSTMILHNAVIVTMDK-ESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~-~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g 96 (304)
|.+++|+|++|++++. ..+++.+++|+|+||||++|++..+. +..+.++||++|++|+|||||+|+|+..+.++|
T Consensus 8 m~~~li~~~~v~~~~~~~~~~~~~~~v~I~~g~I~~ig~~~~~----~~~~~~viD~~G~~v~PGlID~H~H~~~~~~~g 83 (439)
T 2i9u_A 8 INLKIFKGNLIFTKTSDKFTIMKDSYIVVIDGKIASVSSNLPD----KYKGNPIIDFRNNIIIPGMNDLHAHASQYKNLG 83 (439)
T ss_dssp -CEEEEEEEEEEEEETTEEEEEEEEEEEEETTEEEEEESSCCG----GGTTSCEEEEEEEEEEECEEEEEEEGGGGGGTT
T ss_pred cccEEEEeeEEEecCCccceEEeccEEEEECCEEEEecccccc----cCCCceEEcCCCeEEEecceecccccchHhhhC
Confidence 4568999999999762 23466889999999999999864321 112457999999999999999999999888877
Q ss_pred ccCCCCccccccccccCccCCC-ChHHHHHHHHHHHHHHHhcCcceeecCCCCC---HHHHHHHHHHcCCeEEeeccccc
Q 022028 97 IADDVDLMTWLHDRIWPYESNM-TEEDSYISTLLCGIELIHSGVTCFAEAGGQH---VSEMAKAVELLGLRACLVQSTMD 172 (304)
Q Consensus 97 ~~~~~~~~~~l~~~~~~~~~~~-~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~---~~~~~~~~~~~gir~~~~~~~~d 172 (304)
...+.++.+|+....|+.+..+ ++++++..+..++.+++++||||++++.... ....++++.+.|+|.+.+..+++
T Consensus 84 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~g~r~~~~~~~~~ 163 (439)
T 2i9u_A 84 IGMDKELLPWLNNYTFPEEAKFLNVDYAKKTYGRLIKDLIKNGTTRVALFATLHKDSTIELFNMLIKSGIGAYVGKVNMD 163 (439)
T ss_dssp CCCSSCHHHHHHHTHHHHHHGGGSHHHHHHHHHHHHHHHHHTTEEEEEEECCSCHHHHHHHHHHHHHHTCEEEEECEECC
T ss_pred CcCCCCHHHHHHhcccchhhccCCHHHHHHHHHHHHHHHHhcCceEEEEccccccchHHHHHHHHHHcCCEEEEEeeecc
Confidence 6666788888876555544333 6777888888889999999999999976433 24567778889999877655544
Q ss_pred CCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHH
Q 022028 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQV 252 (304)
Q Consensus 173 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~ 252 (304)
.. .+..+ .......++...++++.+... .+.+++.++++.+..++++.++++++.|+++|+++.+|+.|+..+.+.
T Consensus 164 ~~--~p~~~-~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~ 239 (439)
T 2i9u_A 164 YN--CPDYL-TENYITSLNDTEEIILKYKDK-SNIVKPIITPRFVPSCSNELMDGLGKLSYKYRLPVQSHLSENLDEIAV 239 (439)
T ss_dssp SS--CCTTS-CCCHHHHHHHHHHHHHHHTTT-CSSEEECBEECCGGGCCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHH
T ss_pred cc--CCccc-chhHHHHHHHHHHHHHHHhCC-CCceEEEEecCCcCcCCHHHHHHHHHHHHhcCCcEEEeecCChHHHHH
Confidence 21 11111 112334556677777777542 467777788887778899999999999999999999999999988999
Q ss_pred HHHhcCCCCCHHHHHHHhCCCC-CCeeEEEeccCCcchhc-----------cccccccccc
Q 022028 253 VMDTRKVDHGTVTFLDKIEFLQ-NNLLSAHTVWVNHTEVN-----------CTFGNFKYAV 301 (304)
Q Consensus 253 ~~~~~g~~~~~~~~l~~~g~l~-~~~~~~H~~~l~~~di~-----------~p~sN~~l~~ 301 (304)
+.+.+|....+++.+.+.|+++ +++++.||+++++++++ ||.+|..++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~g~~~~~~~~i~H~~~~~~~~~~~l~~~g~~~~~~p~~~~~l~~ 300 (439)
T 2i9u_A 240 VKSLHKKSNFYGEVYDKFGLFGNTPTLMAHCIHSSKEEINLIKRNNVTIVHCPTSNFNLGS 300 (439)
T ss_dssp HHHHCTTCSSHHHHHHHTTCSSSSCEEEEECCSCCHHHHHHHHHTTCEEEECHHHHHHTTC
T ss_pred HHHHhCCCCCHHHHHHHcCCCCCCCeEEEEEecCCHHHHHHHHHcCCEEEECccchhhccc
Confidence 8888887445899999999998 99999999999998876 8888877754
No 12
>2paj_A Putative cytosine/guanine deaminase; NYSGXRC, PSI-II, amidohydrolase, sargasso SEA, enviro sample, structural genomics; 2.70A {Unidentified} SCOP: b.92.1.4 c.1.9.9
Probab=100.00 E-value=9.3e-33 Score=256.65 Aligned_cols=274 Identities=24% Similarity=0.331 Sum_probs=192.9
Q ss_pred ccEEEEccE-EEecCCCCc-----eeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhh
Q 022028 19 STMILHNAV-IVTMDKESR-----VFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQ 92 (304)
Q Consensus 19 ~~~li~~~~-ii~~~~~~~-----~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s 92 (304)
.+++|+|++ |++++ ... .+.+++|+|+||||++|++..+ + .+.++||++|++|+|||||+|+|+..+
T Consensus 10 ~~~li~n~~~i~~~~-~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~-----~-~~~~viD~~G~~v~PG~ID~H~H~~~~ 82 (492)
T 2paj_A 10 PSTLIRNAAAIMTGG-RGTADDPSRVPGPDIRIVGDTIDAIGALAP-----R-PGETIVDATDCVIYPAWVNTHHHLFQS 82 (492)
T ss_dssp CEEEEECBSEEBCCC-CSSSSSCSBCCCCCEEEETTEEEEESSCCC-----C-TTCEEEECBTCEEEECEECCCCCGGGG
T ss_pred CCeEEECCEEEEecC-CccccccceecccEEEEECCEEEEEcCCCC-----C-CCCeEEECCCcEEeeCccccccChhhH
Confidence 357899999 99976 220 3468899999999999997642 1 246899999999999999999999887
Q ss_pred hhhccc--CCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC-C-------CHHHHHHHHHHcCC
Q 022028 93 LAKGIA--DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-Q-------HVSEMAKAVELLGL 162 (304)
Q Consensus 93 ~~~g~~--~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~-~-------~~~~~~~~~~~~gi 162 (304)
..++.. .+.++.+|+....|+....+++++++..++.++.+++++||||++++.. . ..+...++.++.|+
T Consensus 83 ~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~g~ 162 (492)
T 2paj_A 83 LLKGEPAGLDATLTPWLAATPYRFRALFDERRFRLAARIGLIELARSGCATVADHNYVYYPGMPFDSSAILFEEAEKLGL 162 (492)
T ss_dssp GCCSCC-----------------CGGGCCHHHHHHHHHHHHHHHHTTTEEEEEECCCCCCTTCSSCHHHHHHHHHHHTTC
T ss_pred hhcCccCCCCCCHHHHHHhcccchhhcCCHHHHHHHHHHHHHHHHhcCcEEEEechhhcccccccchHHHHHHHHHHcCC
Confidence 766654 4567788988877888888899999999999999999999999999753 1 13556777788999
Q ss_pred eEEeecccccCCC----CCCCCcccCChHHHHHHHHHHHHHHcCCCC-CCeEEEEeeCcc-cCCCHHHHHHHHHHHHHhC
Q 022028 163 RACLVQSTMDCGE----GLPASWAVRTTDDCIQSQKELYAKHHHAAD-GRIRIWFGIRQI-MNATDRLLLETRDMAREFK 236 (304)
Q Consensus 163 r~~~~~~~~d~g~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~-~~~~~e~l~~~~~~a~~~~ 236 (304)
|.++.....+.+. +..+........+.++...++++.+....+ +.+++.++++.. ..++++.++++++.|+++|
T Consensus 163 r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g 242 (492)
T 2paj_A 163 RFVLLRGGATQTRQLEADLPTALRPETLDAYVADIERLAARYHDASPRAMRRVVMAPTTVLYSISPREMRETAAVARRLG 242 (492)
T ss_dssp EEEEEECCCSCCCSCSTTSCGGGCCCCHHHHHHHHHHHHHHTCCCSTTCSEEEEECCTTTTTSSCHHHHHHHHHHHHHTT
T ss_pred EEEEEchhhcccccccccCCccccccCHHHHHHHHHHHHHHhccCCCCCceEEEEecccCCCCCCHHHHHHHHHHHHHcC
Confidence 9987665543221 111111122234556667777777654333 568888888887 7899999999999999999
Q ss_pred CeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------cccccccccc
Q 022028 237 TGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAV 301 (304)
Q Consensus 237 ~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~ 301 (304)
+++.+|+.++..+.+.+.+.+|.+ +++++.+.|+++++.++.||+++++++++ ||.+|.+++.
T Consensus 243 ~~v~~H~~~~~~~~~~~~~~~g~~--~~~~~~~~g~~~~~~~i~H~~~~~~~~i~~l~~~gv~v~~~p~~~~~l~~ 316 (492)
T 2paj_A 243 LRMHSHLSETVGYQDSAYSMYGKS--PVAFCGEHDWLGSDVWYAHLVKVDADEIALLAQTGTGVAHCPQSNGRLGS 316 (492)
T ss_dssp CEEEEECC-------------CCC--HHHHHHHTTCCSTTEEEESCCSCCHHHHHHHHHHTCEEEECHHHHHCC--
T ss_pred CcEEEEeCCChHHHHHHHHHcCCC--HHHHHHHCCCCCCCcEEEEEecCCHHHHHHHHHcCCEEEECchhhcccCC
Confidence 999999999888888888888874 99999999999999999999999999887 8999888763
No 13
>2ood_A BLR3880 protein; PSI-II, PSI-2, guanine deaminase, guanine, structural genomics, protein structure initiative; HET: GUN; 2.62A {Bradyrhizobium japonicum} SCOP: b.92.1.4 c.1.9.9
Probab=100.00 E-value=4.1e-33 Score=258.06 Aligned_cols=275 Identities=19% Similarity=0.284 Sum_probs=215.8
Q ss_pred ccEEEEccEEEecCCC-----------CceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCc
Q 022028 19 STMILHNAVIVTMDKE-----------SRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHV 87 (304)
Q Consensus 19 ~~~li~~~~ii~~~~~-----------~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~ 87 (304)
..++|.+++|+++... .+++++++|+|+||||++|++..+.+..+ .+.++||++|++|+|||||+|+
T Consensus 3 ~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~V~I~~G~I~~Vg~~~~~~~~~--~~~~viD~~G~~v~PG~ID~H~ 80 (475)
T 2ood_A 3 LTTVGIRGTFFDFVDDPWKHIGNEQAAARFHQDGLMVVTDGVIKAFGPYEKIAAAH--PGVEITHIKDRIIVPGFIDGHI 80 (475)
T ss_dssp CCEEEEEEEEEEESSCGGGSTTCGGGGEEEEEEEEEEEESSBEEEEEEHHHHHHHS--TTCEEEEEEEEEEEECEEEEEE
T ss_pred ccceEEEEEEEecCCccccccccCCCcceEEECCEEEEECCEEEEEeChhhhcccc--CCCeEEeCCCcEEecceecCcc
Confidence 4456889999987641 34678999999999999999764432111 2468999999999999999999
Q ss_pred cchhhhhhcccCCCCccccccccccCccCCC-ChHHHHHHHHHHHHHHHhcCcceeecCCCCC---HHHHHHHHHHcCCe
Q 022028 88 HTSQQLAKGIADDVDLMTWLHDRIWPYESNM-TEEDSYISTLLCGIELIHSGVTCFAEAGGQH---VSEMAKAVELLGLR 163 (304)
Q Consensus 88 Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~-~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~---~~~~~~~~~~~gir 163 (304)
|+.++.++|.. +.++.+|+....|+.+..+ ++++++..+..++.+++++||||++++.... .+.+.+++++.|+|
T Consensus 81 Hl~~~~~~g~~-~~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~g~r 159 (475)
T 2ood_A 81 HLPQTRVLGAY-GEQLLPWLQKSIYPEEIKYKDRNYAREGVKRFLDALLAAGTTTCQAFTSSSPVATEELFEEASRRNMR 159 (475)
T ss_dssp EGGGTTCTTCC-SCCHHHHHHHHTHHHHGGGGSHHHHHHHHHHHHHHHHHTTEEEEEEECCSSHHHHHHHHHHHHHHTCC
T ss_pred cHHhHhhcCCC-CCCHHHHHHHhccchhhccCCHHHHHHHHHHHHHHHHhcCceEEEEecccCchhHHHHHHHHHHcCCe
Confidence 99988777654 4467788877666554443 5788888888999999999999999975433 34567788889999
Q ss_pred EEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHh-CCeeeEE
Q 022028 164 ACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF-KTGIHMH 242 (304)
Q Consensus 164 ~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~-~~~~~~H 242 (304)
.+++..+.+.+ . +.......++.+++..++++.+.. .+.++..++++..++++++.++++.++|+++ |+++++|
T Consensus 160 ~~~g~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~g~~v~~H 234 (475)
T 2ood_A 160 VIAGLTGIDRN--A-PAEFIDTPENFYRDSKRLIAQYHD--KGRNLYAITPRFAFGASPELLKACQRLKHEHPDCWVNTH 234 (475)
T ss_dssp EEECCEECCSS--S-CTTTCCCHHHHHHHHHHHHHHHTT--BTTEEEEEEECBGGGCCHHHHHHHHHHHHHCTTSEEEEE
T ss_pred EEEEeeecccC--C-CcccccCHHHHHHHHHHHHHHhcc--CCceEEEEeccccCcCCHHHHHHHHHHHHhCCCCcEEEe
Confidence 87665554422 1 111223345667777888887754 3578888899988899999999999999999 9999999
Q ss_pred ecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------cccccccccc
Q 022028 243 VAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAV 301 (304)
Q Consensus 243 ~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~ 301 (304)
+.|+..+.+.+.+.+|....+++.+++.|+++.++++.||+++++++++ ||.+|.+++.
T Consensus 235 ~~e~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~i~H~~~~~~~~i~~~~~~g~~~~~~P~~~~~l~~ 304 (475)
T 2ood_A 235 ISENPAECSGVLVEHPDCQDYLGVYEKFDLVGPKFSGGHGVYLSNNEFRRMSKKGAAVVFCPCSNLFLGS 304 (475)
T ss_dssp CSCCHHHHHHHHHHCTTCSSHHHHHHTTTCCSTTEEEECCTTCCHHHHHHHHHHTCEEEECHHHHHHTTC
T ss_pred eCCChHHHHHHHHHcCCCccHHHHHHHcCCCCCCcEEEEeecCCHHHHHHHHHcCCEEEEChhhhhhccc
Confidence 9999988999998887544589999999999999999999999998886 8988887664
No 14
>2imr_A Hypothetical protein DR_0824; zinc, NYSGXRC, PSI2, structural genomics, protein structure initiative; 1.78A {Deinococcus radiodurans} SCOP: b.92.1.11 c.1.9.16
Probab=99.98 E-value=1.3e-31 Score=244.26 Aligned_cols=276 Identities=17% Similarity=0.175 Sum_probs=193.4
Q ss_pred CCCCCCCCCC-CCcccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccc
Q 022028 6 SGGGSSSGSL-GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVN 84 (304)
Q Consensus 6 ~~~~~~~~~~-~~~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID 84 (304)
+|++.+.++. ..|.+++|+|++|++++. ..+.+++|+|+||||++|++..+.+..+ .+.++||++ ++|+|||||
T Consensus 23 ~~~~~~~~~~~~~~~~~li~n~~v~~~~~--~~~~~~~V~I~~g~I~~vg~~~~~~~~~--~~~~viD~~-~~v~PGlID 97 (420)
T 2imr_A 23 SEATTPDALTPDAHTPRLLTCDVLYTGMG--GAQSPGGVVVVGETVAAAGHPDELRRQY--PHAAEERAG-AVIAPPPVN 97 (420)
T ss_dssp -------------CCEEEEEESEEECC-----EESSEEEEEETTEEEEEECHHHHHHHC--TTCEEEECC-SEESSCCCE
T ss_pred cccccccccCCcccccEEEECCEEEeCCC--CeeeccEEEEECCEEEEecCcccccccC--CCCeeecCC-eEECCCCEe
Confidence 3444444443 235568999999998763 3567899999999999999764321111 246899999 999999999
Q ss_pred cCccchhhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCCCHHHHHHHHHHcCCeE
Q 022028 85 THVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRA 164 (304)
Q Consensus 85 ~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~gir~ 164 (304)
+|+|+..+.++|.. .++.+|+....++....+++ ..++.++.+++++||||++|+.. ....+.+++.+.|+|.
T Consensus 98 ~H~H~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~GvTtv~d~~~-~~~~~~~~~~~~g~r~ 170 (420)
T 2imr_A 98 AHTHLDMSAYEFQA--LPYFQWIPEVVIRGRHLRGV----AAAQAGADTLTRLGAGGVGDIVW-APEVMDALLAREDLSG 170 (420)
T ss_dssp EEEESSCCHHHHHH--CHHHHTSHHHHHHHTTCCHH----HHHHHHHHHHHHTTCCCEEEEEC-SHHHHHHHHTCTTCCE
T ss_pred cCcCcchhhhhhcc--CCHHHHHHHhhhhhhhccCH----HHHHHHHHHHHhcCcEEEEEccC-CHHHHHHHHHhcCcEE
Confidence 99999887666543 44567765433322212222 44566788899999999999863 2333322466778888
Q ss_pred EeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEec
Q 022028 165 CLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVA 244 (304)
Q Consensus 165 ~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~ 244 (304)
+++..+.+. ++.. ..+.+++..++++.+.....+.+++.++++..+.++++.++++++.|+++|+++++|+.
T Consensus 171 ~~~~~~~~~----~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~ 242 (420)
T 2imr_A 171 TLYFEVLNP----FPDK----ADEVFAAARTHLERWRRLERPGLRLGLSPHTPFTVSHRLMRLLSDYAAGEGLPLQIHVA 242 (420)
T ss_dssp EEEEEECBC----CGGG----HHHHHHHHHHHHHHHHTTCBTTEEEEEEECCSSSBCHHHHHHHHHHHHHHTCCBEEEES
T ss_pred EEEeeecCC----Cchh----hHHHHHHHHHHHHHHhcccCCceEEEecCCcCCCcCHHHHHHHHHHHHHCCCcEEEEeC
Confidence 776554431 1211 22344566677777766555778888999888888999999999999999999999999
Q ss_pred CChhhHHHHHHhcCC------------------------CCCHHHHHHHhCCCCCCeeEEEeccCCcchhc---------
Q 022028 245 EIPYENQVVMDTRKV------------------------DHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN--------- 291 (304)
Q Consensus 245 E~~~~~~~~~~~~g~------------------------~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~--------- 291 (304)
|+..+.+.+.+.+|. ..++++++.+.|+++++.++.||+++++++++
T Consensus 243 e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~i~H~~~l~~~~i~~l~~~g~~~ 322 (420)
T 2imr_A 243 EHPTELEMFRTGGGPLWDNRMPALYPHTLAEVIGREPGPDLTPVRYLDELGVLAARPTLVHMVNVTPDDIARVARAGCAV 322 (420)
T ss_dssp CSHHHHHHHHHSCSTTGGGSCGGGSCSSHHHHHTSCCCTTCCHHHHHHHHTCGGGCCEEEECCSCCHHHHHHHHHHTCCE
T ss_pred CCHHHHHHHHHhhccccccccccchhhhhhhhccccccCCCCHHHHHHHcCCCCCCeEEEecCcCCHHHHHHHHHcCCeE
Confidence 998888888776531 12488999999999999999999999998876
Q ss_pred --cccccccccc
Q 022028 292 --CTFGNFKYAV 301 (304)
Q Consensus 292 --~p~sN~~l~~ 301 (304)
||.+|..++.
T Consensus 323 ~~~p~~~~~~~~ 334 (420)
T 2imr_A 323 VTCPRSNHHLEC 334 (420)
T ss_dssp EECHHHHHHTTC
T ss_pred EECHHHHHHhcc
Confidence 7888877653
No 15
>3hpa_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified}
Probab=99.97 E-value=8.1e-30 Score=234.68 Aligned_cols=277 Identities=25% Similarity=0.465 Sum_probs=205.7
Q ss_pred cccEEEEccEE-EecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhc
Q 022028 18 SSTMILHNAVI-VTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (304)
Q Consensus 18 ~~~~li~~~~i-i~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g 96 (304)
..+++|+|++| +|+|+..+++++++|+|+||||++|++..+. +..+.++||++|++|+|||||+|+|+.++..++
T Consensus 28 p~~llI~na~vi~T~D~~~~vi~~gdV~I~dgrI~aVG~~~~~----~~~~~~vIDa~G~~v~PG~ID~H~H~~~~~~~g 103 (479)
T 3hpa_A 28 PKTLLVKHADVLVTMDDTRRELRDAGLYIEDNRIVAVGPSAEL----PETADEVLDLRGHLVIPGLVNTHHHMYQSLTRA 103 (479)
T ss_dssp -CEEEEEEEEEEECCCTTCCEEEEEEEEEETTEEEEEEEGGGS----CSCCSEEEECTTEEEEECEEECCCCGGGGGSCS
T ss_pred CCCEEEECCEEEEeeCCCCCEEcCcEEEEECCEEEEEeCCccC----CCCCCeEEECCCCEEeeCceeHhhCcchhcccc
Confidence 45799999985 5788777889999999999999999987653 234679999999999999999999999988888
Q ss_pred cc--CCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC-----CCHHHHHHHHHHcCCeEEeecc
Q 022028 97 IA--DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-----QHVSEMAKAVELLGLRACLVQS 169 (304)
Q Consensus 97 ~~--~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~-----~~~~~~~~~~~~~gir~~~~~~ 169 (304)
.. .+.++..|+.. +++.......++.+.....++.+++..|+|++.+... .......+++...|++......
T Consensus 104 ~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 182 (479)
T 3hpa_A 104 VPAAQNAELFGWLTN-LYKIWAHLTPEMIEVSTLTAMAELLQSGCTTSSDHLYIYPNGSRLDDSIGAAQRIGMRFHASRG 182 (479)
T ss_dssp CTTTTTCCHHHHHHH-HHHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEECCBCCCCTTCCHHHHHHHHHHHTCEEEEEEE
T ss_pred cccCCCcchHHHHhh-hhhhhhhcCHHHHHHHHHHHHHHHHHhCCceecceeeeccchhhHHHHHHHHHHhcchhhhhhh
Confidence 65 35677788764 3445556778888888888999999999999988643 2356677888889998866554
Q ss_pred cccCCC---CCCCCcccCChHHHHHHHHHHHHHHcCCC-CCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecC
Q 022028 170 TMDCGE---GLPASWAVRTTDDCIQSQKELYAKHHHAA-DGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAE 245 (304)
Q Consensus 170 ~~d~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E 245 (304)
....+. ..++...........+...++...+.... .......++++.....+++.+.++.+.|.+.+..+.+|+++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~~~h~~~ 262 (479)
T 3hpa_A 183 AMSVGQRDGGLPPDSVVEREPDILRDTQRLIETYHDEGRYAMLRVVVAPCSPFSVSRDLMRDAAVLAREYGVSLHTHLAE 262 (479)
T ss_dssp ECC----------------CHHHHHHHHHHHHHHCCCSTTCSEEEEEEESCTTTSCHHHHHHHHHHHHHHTCEEEEEESC
T ss_pred eeeccccccCCCchhhhhhhhhHHHHHHHHHHHhhhhcccccceeEecccccccCCHHHHHHHHHHHHhcCCeEEeeccc
Confidence 433211 11111112223344455566666665543 34456778888889999999999999999999999999999
Q ss_pred ChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------cccccccccc
Q 022028 246 IPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKYAV 301 (304)
Q Consensus 246 ~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l~~ 301 (304)
...+...+.+.+|.. +++++.+.+.++++..+.||+++++.++. ||.++...+.
T Consensus 263 ~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 327 (479)
T 3hpa_A 263 NVNDIAYSREKFGMT--PAEYAEDLGWVGHDVWHAHCVQLDDAGIGLFARTGTGVAHCPCSNMRLAS 327 (479)
T ss_dssp SHHHHHC-------C--HHHHHHHTTCCSTTEEEEECTTCCHHHHHHHHHHTCEEEECHHHHHHTTC
T ss_pred chHHHHHHHHHcCCc--hHHHHhhhccccccceeeeeEecchhHHHHHHhcCCceeecccccccccc
Confidence 998888888888874 89999999999999999999999998876 6776665543
No 16
>1p1m_A Hypothetical protein TM0936; putative metal dependent hydrolase, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: b.92.1.4 c.1.9.9 PDB: 2plm_A* 1j6p_A
Probab=99.97 E-value=3e-31 Score=240.66 Aligned_cols=250 Identities=24% Similarity=0.379 Sum_probs=195.0
Q ss_pred EEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCC
Q 022028 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (304)
Q Consensus 21 ~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~ 100 (304)
++|+|++|+++++. . ..+++|+|+||||++|++.. + +.+ ||++|++|+|||||+|+|+..+..++...+
T Consensus 1 ~li~n~~v~~~~~~-~-~~~~~v~I~~g~I~~vg~~~------~--~~~-iD~~g~~v~PG~ID~H~H~~~~~~~~~~~~ 69 (406)
T 1p1m_A 1 MIIGNCLILKDFSS-E-PFWGAVEIENGTIKRVLQGE------V--KVD-LDLSGKLVMPALFNTHTHAPMTLLRGVAED 69 (406)
T ss_dssp CEEEEEEECCSTTS-C-CEEEEEEEETTEEEEEEESS------C--CCS-EECTTEEEEECEEEEEECGGGGGGTTSSCS
T ss_pred CEEEccEEEecCcc-c-cccceEEEECCEEEEeeCCC------C--cce-ecCCCcEEeecccchhhccchhhhccccCC
Confidence 37899999997643 2 56789999999999998653 1 346 999999999999999999999888887777
Q ss_pred CCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCCCHHHHHHHHHHcCCeEEeecccccCCCCCCCC
Q 022028 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPAS 180 (304)
Q Consensus 101 ~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~ 180 (304)
.++.+|+....|+.....++++++..++.++.+++++||||++++. ...+...+++.+.|+|.+++..+++.+. .
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~~~~~~~~~~g~r~~~~~~~~~~~~----~ 144 (406)
T 1p1m_A 70 LSFEEWLFSKVLPIEDRLTEKMAYYGTILAQMEMARHGIAGFVDMY-FHEEWIAKAVRDFGMRALLTRGLVDSNG----D 144 (406)
T ss_dssp CCHHHHHHTTHHHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEEEEE-SSHHHHHHHHHHHCCEEEEEEEECCBTT----B
T ss_pred CCHHHHHHhhhccchhcCCHHHHHHHHHHHHHHHHhcCcEEEEech-hCHHHHHHHHHHcCCEEEEEcccccCCC----C
Confidence 7889999888888777788999999988899999999999999976 3456677778889999877665554321 1
Q ss_pred cccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHH--hcC
Q 022028 181 WAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD--TRK 258 (304)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~--~~g 258 (304)
..+.++...+.++.+.+.. +.++..++++.++.++++.+++++++|+++|+++++|+.|+..+.+.+.+ .+|
T Consensus 145 -----~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g 218 (406)
T 1p1m_A 145 -----DGGRLEENLKLYNEWNGFE-GRIFVGFGPHSPYLCSEEYLKRVFDTAKSLNAPVTIHLYETSKEEYDLEDILNIG 218 (406)
T ss_dssp -----CTTHHHHHHHHHHHHTTGG-GTEEEEEEECCTTTSCHHHHHHHHHHHHHTTCCEEEEESCSTTCCCCTHHHHTTT
T ss_pred -----HHHHHHHHHHHHHHhhCCC-CcEEEEEecCccCcCCHHHHHHHHHHHHHCCCcEEEEcCCCchHHHHHHHhhhCC
Confidence 1234455556677665432 56888888988888999999999999999999999999987655544433 232
Q ss_pred CCCCHHHHHHHhCCCCCCeeEEEec---cCCcchhc-----ccccccccccc
Q 022028 259 VDHGTVTFLDKIEFLQNNLLSAHTV---WVNHTEVN-----CTFGNFKYAVH 302 (304)
Q Consensus 259 ~~~~~~~~l~~~g~l~~~~~~~H~~---~l~~~di~-----~p~sN~~l~~~ 302 (304)
+++.|+++ .++.||+ ++++++++ ||.+|.+++..
T Consensus 219 --------~~~~g~~~--~~~~H~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 260 (406)
T 1p1m_A 219 --------LKEVKTIA--AHCVHLPERYFGVLKDIPFFVSHNPASNLKLGNG 260 (406)
T ss_dssp --------TTTSCEEE--EECTTCCGGGTTTTTTSSEEEEECHHHHHHTTCC
T ss_pred --------HhHcCcce--eEeeeccCcccCCHHHHHHHHHhCcHHHhhcCCC
Confidence 23456554 6899999 99999886 77788877653
No 17
>1ra0_A Cytosine deaminase; alpha-beta barrel, hexamer, conformation change, D314G mutant, hydrolase; 1.12A {Escherichia coli} SCOP: b.92.1.2 c.1.9.5 PDB: 1r9x_A 1ra5_A 1r9y_A 1r9z_A 1rak_A 3r0d_A* 3o7u_A* 3rn6_A* 1k6w_A 1k70_A 3g77_A
Probab=99.95 E-value=2e-28 Score=223.79 Aligned_cols=252 Identities=13% Similarity=0.111 Sum_probs=171.1
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcc
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~ 97 (304)
+.+++|+|++|++++ .+++|+|+||||++|++..+. +..+.++||++|++|+|||||+|+|+..+.+++.
T Consensus 7 ~~~~li~n~~v~~~~------~~~~v~I~~g~I~~vg~~~~~----~~~~~~viD~~G~~v~PGlID~H~Hl~~~~~~~~ 76 (430)
T 1ra0_A 7 NALQTIINARLPGEE------GLWQIHLQDGKISAIDAQSGV----MPITENSLDAEQGLVIPPFVEPHIHLDTTQTAGQ 76 (430)
T ss_dssp -CCCEEEEEBCTTCC------SEEEEEEETTEEEEEEEESSC----CCCCTTEEECTTCEEESCEEEEEECTTTTTCTTS
T ss_pred CCcEEEEeeEecCCC------ceeEEEEECCEEEEeecCCCC----CCCCcceEccCCCEecccccccccchhhhhhcCC
Confidence 345889999999743 578999999999999875432 1124579999999999999999999988777765
Q ss_pred cC---CCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC-C-----HHHHHHHHHHcCCeEEeec
Q 022028 98 AD---DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-H-----VSEMAKAVELLGLRACLVQ 168 (304)
Q Consensus 98 ~~---~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~-~-----~~~~~~~~~~~gir~~~~~ 168 (304)
.. +.++.+|+.. .++....+++++++..++.++.+++++||||++++... . .+.+.++.+..+.+....
T Consensus 77 ~~~~~~~~~~~~l~~-~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 154 (430)
T 1ra0_A 77 PNWNQSGTLFEGIER-WAERKALLTHDDVKQRAWQTLKWQIANGIQHVRTHVDVSDATLTALKAMLEVKQEVAPWIDLQ- 154 (430)
T ss_dssp SSCCSSCCHHHHHHH-HHHHHTTCCHHHHHHHHHHHHHHHHHTTEEEEEEEEECCSTTCHHHHHHHHHHHHHTTTCEEE-
T ss_pred CcCCCCCCHHHHHHH-hHHhhhhcCHHHHHHHHHHHHHHHHhcCccEEeeccccCChHHHHHHHHHHHHHhhhhhEEEE-
Confidence 43 5677888864 45556678899999999999999999999999986522 1 233333333322222111
Q ss_pred ccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccC--CCHHHHHHHHHHHHHhCCeeeEEecCC
Q 022028 169 STMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMN--ATDRLLLETRDMAREFKTGIHMHVAEI 246 (304)
Q Consensus 169 ~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~e~l~~~~~~a~~~~~~~~~H~~E~ 246 (304)
+.+... ...+... ...+..++.++. +.+.+. ..++.+++ ++++.++++++.|+++|+++.+|+.|+
T Consensus 155 -~~~~~~--~~~~~~~---~~~~~~~~~~~~----g~~~~~--~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~ 222 (430)
T 1ra0_A 155 -IVAFPQ--EGILSYP---NGEALLEEALRL----GADVVG--AIPHFEFTREYGVESLHKTFALAQKYDRLIDVHCDEI 222 (430)
T ss_dssp -EEEECT--TCSSSST---THHHHHHHHHHT----TCSEEC--CCGGGSSSHHHHHHHHHHHHHHHHHHTCEEEEEECCS
T ss_pred -EEecCC--cccccCc---hHHHHHHHHHHh----CCCeEe--eeecccccccccHHHHHHHHHHHHHcCCCEEEEECCC
Confidence 111000 0001011 111122222222 223332 23555665 789999999999999999999999887
Q ss_pred hhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcc-------hhc-----------ccccccccc
Q 022028 247 PYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHT-------EVN-----------CTFGNFKYA 300 (304)
Q Consensus 247 ~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~-------di~-----------~p~sN~~l~ 300 (304)
..+.+.+.+. +++++.+.|+ ++++.+.||++++++ +++ ||.+|.+++
T Consensus 223 ~~~~~~~~~~------~~~~~~~~g~-~~~~~i~H~~~~~~~~~~~~~~~i~~~~~~gv~v~~~p~~~~~~~ 287 (430)
T 1ra0_A 223 DDEQSRFVET------VAALAHHEGM-GARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHLQ 287 (430)
T ss_dssp SCTTCCHHHH------HHHHHHHHTC-GGGEEEEECGGGGGSCHHHHHHHHHHHHHHTCEEEECHHHHHHHT
T ss_pred CchhHHHHHH------HHHHHHHhCC-CCCEEEEeccccccCChHhHHHHHHHHHHcCCEEEECchhhhhhc
Confidence 6554433331 5678888896 888999999999986 554 899888776
No 18
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=99.94 E-value=8.8e-26 Score=205.51 Aligned_cols=228 Identities=17% Similarity=0.176 Sum_probs=156.4
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcc
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~ 97 (304)
|++++|+|++|++++. .+++++++|+|+||||++|++.... +.+.++||++|++|+|||||+|+|+..+..
T Consensus 3 ~~~~~i~n~~v~~~~~-~~~~~~~~v~I~~g~I~~vg~~~~~-----~~~~~viD~~G~~v~PGlID~H~H~~~~~~--- 73 (423)
T 3feq_A 3 LTITVLQGGNVLDLER-GVLLEHHHVVIDGERIVEVTDRPVD-----LPNAQAIDVRGKTVMPGFIDCHVHVLASNA--- 73 (423)
T ss_dssp -CEEEEEEEEEEETTT-TEEEEEEEEEEETTEEEEEECSCCC-----CSSCEEEECTTCEEEECEEEEEECTTCCSS---
T ss_pred ceEEEEEccEEEeCCC-CcccCCceEEEECCEEEEecCCCCC-----CCCCeEEeCCCCEECCCeeeeEeeecccCC---
Confidence 6678999999999764 3577889999999999999985321 246799999999999999999999976432
Q ss_pred cCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCCCHHHHHHHHH---HcCCeEEeecccccCC
Q 022028 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVE---LLGLRACLVQSTMDCG 174 (304)
Q Consensus 98 ~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~---~~gir~~~~~~~~d~g 174 (304)
++ +....+++++.+..+...+.+++++||||++|++... ..+.++.+ ..|+|.+.+...++..
T Consensus 74 ----~~---------~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~-~~l~~~~~~~~~~g~r~~~~g~~~~~~ 139 (423)
T 3feq_A 74 ----NL---------GVNATQPNILAAIRSLPILDAMLSRGFTSVRDAGGAD-WSLMQAVETGLVSGPRIFPSGKALSQT 139 (423)
T ss_dssp ----CH---------HHHHHSCHHHHHHTHHHHHHHHHHTTEEEEEECSSCC-HHHHHHHHTTSSCSCEEECCCSEEECT
T ss_pred ----Ch---------hhhhcCCHHHHHHHHHHHHHHHHhCCeEEEEeCCCch-HHHHHHHHcCCCCCCeEEecCcccccC
Confidence 11 0112355677788888889999999999999987543 33344433 3588887766554421
Q ss_pred CCCCCC--------------------cccCChHHHHHHHHHHHHHHcCCCCCCeEEEEe--------eCcccCCCHHHHH
Q 022028 175 EGLPAS--------------------WAVRTTDDCIQSQKELYAKHHHAADGRIRIWFG--------IRQIMNATDRLLL 226 (304)
Q Consensus 175 ~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--------~~~~~~~~~e~l~ 226 (304)
.+.... ......++..+..++.+ ..+.+.+++... |++...++++.++
T Consensus 140 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~----~~g~~~ik~~~~g~~~~~~~p~~~~~~~~e~l~ 215 (423)
T 3feq_A 140 GGHGDFRPRGDLLEPCSCCFRTGAIARVVDGVEGVRLAVREEI----QKGATQIKIMASGGVASPTDPIANTQYSEDEIR 215 (423)
T ss_dssp TSTTCCCCC---CCCCCSSCCTTCSEEECCSHHHHHHHHHHHH----HTTCSSEEEECBCCSSSSSCCTTSBCSCHHHHH
T ss_pred CCCccccccccccccccccccccccceecCCHHHHHHHHHHHH----HcCCCEEEEeccCCcCCCCCCcccccCCHHHHH
Confidence 111100 00122333333333333 334567887654 5566789999999
Q ss_pred HHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc
Q 022028 227 ETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN 291 (304)
Q Consensus 227 ~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~ 291 (304)
++++.|+++|+++.+|+.+. ... +...+.|. ..+.||.++++++++
T Consensus 216 ~~~~~A~~~g~~v~~H~~~~-~~i--------------~~~l~~g~----~~i~H~~~~~~~~~~ 261 (423)
T 3feq_A 216 AIVDEAEAANTYVMAHAYTG-RAI--------------ARAVRCGV----RTIEHGNLVDEAAAK 261 (423)
T ss_dssp HHHHHHHHTTCCEEEEEEEH-HHH--------------HHHHHHTC----CEEEEEEECCHHHHH
T ss_pred HHHHHHHHCCCeEEEEeCCh-HHH--------------HHHHHcCC----CEEeccCcCCHHHHH
Confidence 99999999999999999743 222 22223444 268899999988765
No 19
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=99.93 E-value=8.5e-25 Score=197.75 Aligned_cols=230 Identities=16% Similarity=0.165 Sum_probs=157.8
Q ss_pred ccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhccc
Q 022028 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (304)
Q Consensus 19 ~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~ 98 (304)
.+++|+|++|++++. .+++.+++|+|+||||++|++..+. .+.+.++||++|++|+|||||+|+|+.....
T Consensus 2 ~~~~i~~~~i~~~~~-~~~~~~~~v~I~~g~I~~vg~~~~~----~~~~~~viD~~G~~v~PGlID~H~H~~~~~~---- 72 (403)
T 3gnh_A 2 EIKAVSAARLLDVAS-GKYVDNPLVIVTDGRITSIGKKGDA----VPAGATAVDLPGVTLLPGLIDMHVHLDSLAE---- 72 (403)
T ss_dssp CEEEEEEEEEEETTT-TEEEESEEEEEETTEEEEEEETTSC----CCTTCEEEEEEEEEEEECEEEEEECTTCCTT----
T ss_pred ccEEEEccEEEECCC-CcccCCCEEEEECCEEEEEeCCCCC----CCCCCeEEECCCCEEcCCeEeeeEccccCcc----
Confidence 358899999999774 3567899999999999999986531 1236799999999999999999999975321
Q ss_pred CCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC-CHHHHHHHHHHc----CCeEEeecccccC
Q 022028 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-HVSEMAKAVELL----GLRACLVQSTMDC 173 (304)
Q Consensus 99 ~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~-~~~~~~~~~~~~----gir~~~~~~~~d~ 173 (304)
..|... ...++++.+..+...+.+++++||||++|++.. ......+.+.+. |.|.+.+...++.
T Consensus 73 -----~~~~~~------~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~g~~~gpr~~~~~~~~~~ 141 (403)
T 3gnh_A 73 -----VGGYNS------LEYSDRFWSVVQTANAKKTLEAGFTTVRNVGAADYDDVGLREAIDAGYVPGPRIVTAAISFGA 141 (403)
T ss_dssp -----CCSGGG------GGSCHHHHHHHHHHHHHHHHHTTEEEEEECCCSTTHHHHHHHHHHTTSSCCCEEEECCSCEES
T ss_pred -----cchhhh------hcCCHHHHHHHHHHHHHHHHhCCeeEEEeCCCCccccHHHHHHHHCCCCCCCeEEecCccccc
Confidence 112111 134677777777888999999999999998753 233334444444 4588776554432
Q ss_pred CCC------CCCC------cccCChHHHHHHHHHHHHHHcCCCCCCeEEEEe--------eCcccCCCHHHHHHHHHHHH
Q 022028 174 GEG------LPAS------WAVRTTDDCIQSQKELYAKHHHAADGRIRIWFG--------IRQIMNATDRLLLETRDMAR 233 (304)
Q Consensus 174 g~~------~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--------~~~~~~~~~e~l~~~~~~a~ 233 (304)
..+ +++. ......++..+..+++++ .+.+.+|+... +.+...++++.++++++.|+
T Consensus 142 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~~~ik~~~~G~~~~~~~~~~~~~~~~e~l~~~~~~A~ 217 (403)
T 3gnh_A 142 TGGHCDSTFFPPSMDQKNPFNSDSPDEARKAVRTLKK----YGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAH 217 (403)
T ss_dssp TTSTTSCCSSCGGGCCCCTTCCCSHHHHHHHHHHHHH----TTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHH
T ss_pred CCCCcccccCchhhcccCCcccCCHHHHHHHHHHHHH----cCCCEEEEeecCCcCCCCCCCccccCCHHHHHHHHHHHH
Confidence 111 1111 112233444444444443 34567777653 34567789999999999999
Q ss_pred HhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc
Q 022028 234 EFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN 291 (304)
Q Consensus 234 ~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~ 291 (304)
++|+++.+|+.+... ++...+.|. ..+.||+++++++++
T Consensus 218 ~~g~~v~~H~~~~~~---------------i~~~~~~g~----~~i~H~~~~~~~~~~ 256 (403)
T 3gnh_A 218 MAGIKVAAHAHGASG---------------IREAVRAGV----DTIEHASLVDDEGIK 256 (403)
T ss_dssp HTTCEEEEEECSHHH---------------HHHHHHTTC----SEEEECTTCCHHHHH
T ss_pred HCCCEEEEEeCCHHH---------------HHHHHHhCC----CEEecCCcCCHHHHH
Confidence 999999999966432 233334454 368999999999887
No 20
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=99.93 E-value=1.6e-24 Score=197.58 Aligned_cols=229 Identities=14% Similarity=0.177 Sum_probs=157.6
Q ss_pred CcccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhc
Q 022028 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (304)
Q Consensus 17 ~~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g 96 (304)
+|.+++|+|++|++++. ..++++++|+|+||||++|++.... +.+.++||++|++|+|||||+|+|+..+..
T Consensus 2 ~m~~~~i~n~~i~~~~~-~~~~~~~~i~i~~g~I~~i~~~~~~-----~~~~~~iD~~g~~v~PGliD~H~H~~~~~~-- 73 (426)
T 2r8c_A 2 SLTTFLFRNGALLDPDH-PDLLQGFEILIEDGFIREVSDKPIK-----SSNAHVIDVKGKTIMPGLIDLHVHVVAIEF-- 73 (426)
T ss_dssp --CEEEEEEEEECCTTS-SSCEEEEEEEEESSBEEEEESSCCC-----CSSCEEEECTTCEEEECEEEEEECTTCCSS--
T ss_pred CcccEEEEeeEEEeCCC-CcccCCceEEEECCEEEEEcCCCCC-----CCCCeEEECCCCEEcCCeEeeeeccccccC--
Confidence 35678999999999753 3567889999999999999985321 236799999999999999999999976432
Q ss_pred ccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCCCHHHHHHHHHH---cCCeEEeecccccC
Q 022028 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVEL---LGLRACLVQSTMDC 173 (304)
Q Consensus 97 ~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~---~gir~~~~~~~~d~ 173 (304)
.+. ....+++++.+..+...+.+++++||||++|++... ..+.++.+. .|+|.+.+...++.
T Consensus 74 -----~~~---------~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~-~~l~~~i~~~~~~gpri~~~g~~i~~ 138 (426)
T 2r8c_A 74 -----NLP---------RVATLPNVLVTLRAVPIMRAMLRRGFTTVRDAGGAG-YPFKQAVESGLVEGPRLFVSGRALSQ 138 (426)
T ss_dssp -----CHH---------HHHHSCHHHHHHHHHHHHHHHHHTTEEEEEECSSCC-HHHHHHHHTTSSCCCEEEECCSEEEC
T ss_pred -----Cch---------hhccCCHHHHHHHHHHHHHHHHhCCeEEEEeCCCch-HHHHHHHHcCCCCCCeEEecCCcccC
Confidence 110 112356777888888899999999999999998543 233444333 57888776555432
Q ss_pred CCCCCC-----------------------CcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEe--------eCcccCCCH
Q 022028 174 GEGLPA-----------------------SWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFG--------IRQIMNATD 222 (304)
Q Consensus 174 g~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--------~~~~~~~~~ 222 (304)
..+... .......++..+..++.++. +.+.++++.. |++...+++
T Consensus 139 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----g~~~ik~~~~G~~~~~~~p~~~~~~~~ 214 (426)
T 2r8c_A 139 TGGHADPRARSDYMPPDSPCGCCVRVGALGRVADGVDEVRRAVREELQM----GADQIKIMASGGVASPTDPVGVFGYSE 214 (426)
T ss_dssp TTSTTCCCCCSSBCCCSCSSSSBCCTTCCEEECCSHHHHHHHHHHHHHH----TCSSEEEECBCCSSSSSCCSSCBCSCH
T ss_pred CCCCcccccccccccccccccccccccccccccCCHHHHHHHHHHHHHc----CCCEEEEEecCCCCCCCCCcccccCCH
Confidence 111100 00112344555555555543 3456777654 555668999
Q ss_pred HHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc
Q 022028 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN 291 (304)
Q Consensus 223 e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~ 291 (304)
+.++++++.|+++|+++.+|+.+. ... +...+.|. ..+.||.++++++++
T Consensus 215 e~l~~~~~~A~~~g~~v~~H~~~~-~~i--------------~~al~~G~----~~i~H~~~~~~~~~~ 264 (426)
T 2r8c_A 215 DEIRAIVAEAQGRGTYVLAHAYTP-AAI--------------ARAVRCGV----RTIEHGNLIDDETAR 264 (426)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSH-HHH--------------HHHHHTTC----SEEEECTTCCHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEEeCCh-HHH--------------HHHHHcCC----CEEecCCcCCHHHHH
Confidence 999999999999999999999743 222 22223443 258899999988765
No 21
>2qt3_A N-isopropylammelide isopropyl amidohydrolase; N-isopropylammelide isopropylaminohydrolase ATZC, structural genomics, NYSGXRC, target 9364B; 2.24A {Pseudomonas SP}
Probab=99.92 E-value=3.6e-25 Score=200.29 Aligned_cols=234 Identities=16% Similarity=0.128 Sum_probs=153.4
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhh---
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLA--- 94 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~--- 94 (304)
+.+++|+|++|++++ . .++|+|+||||++|++..+. .+.++||++|++|+|||||+|+|+..+.+
T Consensus 4 ~~~~li~n~~v~~~~---~---~~~v~I~~g~I~~vg~~~~~------~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~ 71 (403)
T 2qt3_A 4 DFDLIIRNAYLSEKD---S---VYDIGIVGDRIIKIEAKIEG------TVKDEIDAKGNLVSPGFVDAHTHMDKSFTSTG 71 (403)
T ss_dssp CEEEEEEEEEETTTT---E---EEEEEEETTEEEEEESSCCS------CEEEEEECTTCBEEECEEEEEECGGGTTTTCS
T ss_pred ccceEEEeeEecCCC---e---eEEEEEECCEEEEeecCCCC------CccceEcCCCCEecccceeeeeccchhhcccc
Confidence 356899999999743 1 17999999999999976431 13579999999999999999999988764
Q ss_pred ------hccc--CCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC---CC----HHHHHHHHHH
Q 022028 95 ------KGIA--DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG---QH----VSEMAKAVEL 159 (304)
Q Consensus 95 ------~g~~--~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~---~~----~~~~~~~~~~ 159 (304)
++.. ...++.+|+.. ++ .. ++++++..+...+.+++++||||++++.. .. .+.+.++.++
T Consensus 72 ~~~~~~~g~~~~~~~~l~~~~~~--~~--~~-~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~ 146 (403)
T 2qt3_A 72 ERLPKFWSRPYTRDAAIEDGLKY--YK--NA-THEEIKRHVIEHAHMQVLHGTLYTRTHVDVDSVAKTKAVEAVLEAKEE 146 (403)
T ss_dssp SSSCTTCSSCCCHHHHHHHHHHH--HH--HC-CHHHHHHHHHHHHHHHHHTTEEEEEEEEECSTTTTTHHHHHHHHHHHH
T ss_pred cccccccCCCcccCcCHHHHHHH--hh--hc-CHHHHHHHHHHHHHHHHHcCCcEEEEEEcccCccccchHHHHHHHHHH
Confidence 2211 11235666653 22 22 78899999999999999999999965432 11 2344455554
Q ss_pred cCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCee
Q 022028 160 LGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGI 239 (304)
Q Consensus 160 ~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~ 239 (304)
.+..... .+... +.... ....+ .+++++++...+.+.+ ..+.|+..+.++++.+++++++|+++|+++
T Consensus 147 ~~~~~~~--~~~~~----~~~~~-~~~~~----~~~~~~~~~~~g~~~~-~~~~p~~~~~~~~~~l~~~~~~A~~~g~~v 214 (403)
T 2qt3_A 147 LKDLIDI--QVVAF----AQSGF-FVDLE----SESLIRKSLDMGCDLV-GGVDPATRENNVEGSLDLCFKLAKEYDVDI 214 (403)
T ss_dssp HTTTCEE--EEEEE----CTTCT-TTSTT----HHHHHHHHHHTTCSEE-ECBCTTTTTSCHHHHHHHHHHHHHHTTCEE
T ss_pred hhcceeE--EEEEc----CCccc-ccCcc----hHHHHHHHHhcCCCeE-EEecCCCCCCChHHHHHHHHHHHHHcCCCe
Confidence 3321111 01110 00000 00111 1223333222222222 235576667778899999999999999999
Q ss_pred eEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCc
Q 022028 240 HMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH 287 (304)
Q Consensus 240 ~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~ 287 (304)
++|+.|...+.....+. .++++.+.|+ ++++.+.||+++++
T Consensus 215 ~~H~~~~~~~~~~~~~~------~~~~~~~~g~-~~~~~i~H~~~~~~ 255 (403)
T 2qt3_A 215 DYHIHDIGTVGVYSINR------LAQKTIENGY-KGRVTTSHAWCFAD 255 (403)
T ss_dssp EEEECCCHHHHHHHHHH------HHHHHHHTTC-TTSEEEEECTHHHH
T ss_pred EEEeCCcccchhHHHHH------HHHHHHHcCC-CCCeEEEehhhhcc
Confidence 99999987755443331 4677778887 78899999999986
No 22
>2qs8_A XAA-Pro dipeptidase; amidohydrolase, TIM barrel, protein structure initiative, PSI-2, NYSGXRC, structural genomics; 2.33A {Alteromonas macleodii} SCOP: b.92.1.9 c.1.9.18
Probab=99.91 E-value=6.2e-23 Score=186.60 Aligned_cols=232 Identities=16% Similarity=0.143 Sum_probs=149.3
Q ss_pred ccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCc--eEEeCCCCEeeccccccCccchhhhhhc
Q 022028 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMAD--QIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (304)
Q Consensus 19 ~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~--~vID~~g~iv~PG~ID~H~Hl~~s~~~g 96 (304)
.+++|+|++|++++.. .++.+++|+|+||||++|++.. . + .+. ++||++|++|+|||||+|+|+..+.
T Consensus 7 ~~~li~n~~v~~~~~~-~~~~~~~v~I~~g~I~~vg~~~-~----~-~~~~~~viD~~g~~v~PGlID~H~H~~~~~--- 76 (418)
T 2qs8_A 7 SKTLIHAGKLIDGKSD-QVQSRISIVIDGNIISDIKKGF-I----S-SNDFEDYIDLRDHTVLPGLMDMHVHFGQEY--- 76 (418)
T ss_dssp CCEEEEEEEECCSSCS-SCEEEEEEEEETTEEEEEEESC-C----C-CTTSSEEEEEEEEEEEECEEEEEECTTCCC---
T ss_pred ccEEEEeeEEEeCCCC-ccccCcEEEEECCEEEEEeCCC-C----C-CCCcceEEECCCCEECCCeeeeeeccccCC---
Confidence 3578999999997643 4667899999999999998753 1 1 245 8999999999999999999997632
Q ss_pred ccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC-CHHHHHHHHHHcC----CeEEeecccc
Q 022028 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-HVSEMAKAVELLG----LRACLVQSTM 171 (304)
Q Consensus 97 ~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~-~~~~~~~~~~~~g----ir~~~~~~~~ 171 (304)
.+..| .. ...++++.+..+..++.+++++||||++|+... .....++.+.+.| .|.+.+...+
T Consensus 77 -----~~~~~-~~------~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~g~~~~~r~~~~~~~~ 144 (418)
T 2qs8_A 77 -----QSKAQ-AP------IKVEREMQAILATQHAYVTFKSGFTTVRQVGDSGLVAISLRDAINSGKLAGPRIFAAGKTI 144 (418)
T ss_dssp -----CCTTT-SC------SCCCHHHHHHHHHHHHHHHHHTTEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEECCSCB
T ss_pred -----CCCch-hh------hcCCHHHHHHHHHHHHHHHHHcCCCEEEeCCCCccccHHHHHHHHCCCCCCCeEEecCccc
Confidence 22334 11 124677778888888999999999999998642 2333444445544 3665543222
Q ss_pred -------cCCCCCCCCcccC-----ChHHHHHHHHHHHHHHcCCCCCCeEEEEe-----eC---cccCCCHHHHHHHHHH
Q 022028 172 -------DCGEGLPASWAVR-----TTDDCIQSQKELYAKHHHAADGRIRIWFG-----IR---QIMNATDRLLLETRDM 231 (304)
Q Consensus 172 -------d~g~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-----~~---~~~~~~~e~l~~~~~~ 231 (304)
+.++.+.+.+... ......++.++.+++....+.+.++++.. ++ +...++++.++++++.
T Consensus 145 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~g~~~~~~~~~g~~~~~~~~l~~~~~~ 224 (418)
T 2qs8_A 145 ATTGGHADPTNGKAVDDYDYPVPEQGVVNGPYEVYAAVRQRYKDGADGIKITVTGGVLSVAKSGQNPQFTQEEVDAVVSA 224 (418)
T ss_dssp EETTCTTCTTTTCCGGGCCCCCGGGTEECSHHHHHHHHHHHHHHTCSEEEEECBCCSSSSSSCSSCBCSCHHHHHHHHHH
T ss_pred cccCCCccccccccccccccccccccccCCHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCCCCcccCCHHHHHHHHHH
Confidence 1012122211110 00111222333333222122356776542 22 2356899999999999
Q ss_pred HHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc
Q 022028 232 AREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN 291 (304)
Q Consensus 232 a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~ 291 (304)
|+++|+++.+|+.+ ... ++.+.+.|. ..+.||+++++++++
T Consensus 225 A~~~g~~v~~H~~~-~~~--------------i~~~~~~g~----~~i~H~~~~~~~~i~ 265 (418)
T 2qs8_A 225 AKDYGMWVAVHAHG-AEG--------------MKRAIKAGV----DSIEHGTFMDLEAMD 265 (418)
T ss_dssp HHHTTCEEEEEECS-HHH--------------HHHHHHHTC----SEEEECTTCCHHHHH
T ss_pred HHHcCCEEEEEECC-HHH--------------HHHHHHcCC----CEEEECCCCCHHHHH
Confidence 99999999999853 222 222223443 368999999998887
No 23
>3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A*
Probab=99.90 E-value=2.6e-22 Score=181.83 Aligned_cols=232 Identities=13% Similarity=0.192 Sum_probs=148.2
Q ss_pred CCcccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhh
Q 022028 16 GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAK 95 (304)
Q Consensus 16 ~~~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~ 95 (304)
.|+.+++|+|++|++++.. .+++ ++|+|+||||++|++. . + .+.++||++|++|+|||||+|+|+. +.
T Consensus 3 ~~~~~~~i~n~~v~~~~~~-~~~~-~~v~I~~g~I~~ig~~-~-----~-~~~~viD~~g~~v~PGlID~H~H~~-~~-- 70 (408)
T 3be7_A 3 LTSEDFLIKSKGYLDIQTG-EIIK-ADLLIRNGKIAEIGKI-N-----T-KDATVISIPDLILIPGLMDSHVHIV-GN-- 70 (408)
T ss_dssp --CCCEEEEEEEEECTTTC-CEEC-CEEEEETTEEEEEECC-C-----C-SSSEEEEEEEEEEEECEEEEEECCS-SC--
T ss_pred cccceEEEEeeEEEeCCCC-ceee-eEEEEECCEEEEEeCC-C-----C-CCCeEEECCCCEECcCceeeeEccc-CC--
Confidence 3456789999999987642 4566 8999999999999876 2 1 2468999999999999999999996 32
Q ss_pred cccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC-CHHHHHHHHHHcCC----eEEeeccc
Q 022028 96 GIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-HVSEMAKAVELLGL----RACLVQST 170 (304)
Q Consensus 96 g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~-~~~~~~~~~~~~gi----r~~~~~~~ 170 (304)
.+..| .. + ..++++.+..+...+.+++++||||++++... .....++.+.+.|. |.+.....
T Consensus 71 ------~~~~~-~~-~-----~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 137 (408)
T 3be7_A 71 ------DSKGE-ES-I-----ADSSHMGTVWGVVNAEKTLMAGFTTVRNVGAANYADVSVRDAIERGVINGPTMLVSGPA 137 (408)
T ss_dssp ------CCCSG-GG-T-----TCCTHHHHHHHHHHHHHHHTTTEEEEEECCCSTTHHHHHHHHHHTTSSCCCEEEECCSC
T ss_pred ------CCcch-hh-h-----cCCHHHHHHHHHHHHHHHHHcCCCEEEeCCCccccCHHHHHHHHCCCCCCCEEEEccce
Confidence 11233 21 1 24677778888888999999999999998752 23333444455554 55443211
Q ss_pred c-cCC-----CCCCCCcccCC--hHHHHHHHHHHHHHHcCCCCCCeEEEEe-----eC---cccCCCHHHHHHHHHHHHH
Q 022028 171 M-DCG-----EGLPASWAVRT--TDDCIQSQKELYAKHHHAADGRIRIWFG-----IR---QIMNATDRLLLETRDMARE 234 (304)
Q Consensus 171 ~-d~g-----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~-----~~---~~~~~~~e~l~~~~~~a~~ 234 (304)
. ..+ +.+.+.+.... .....++.++.+++....+.+.+++... +. +...++++.+++++++|++
T Consensus 138 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~g~~~~~~~~~g~~~~~~~~l~~~~~~A~~ 217 (408)
T 3be7_A 138 LGITGGHCDHNLLPPEFNYSSEGVVDSPWEARKMVRKNRKYGADLIKFCATGGVMSRNTDVNAKQFTLEEMKAIVDEAHN 217 (408)
T ss_dssp BBCTTSTTSCCCSCTTTCCCCTTBCCSHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHH
T ss_pred eeccCCCCccccccccccccCCcccCCHHHHHHHHHHHHhcCCCEEEEEecCCcCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 1 111 11111111000 0111233444444433333456666532 21 2356789999999999999
Q ss_pred hCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc
Q 022028 235 FKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN 291 (304)
Q Consensus 235 ~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~ 291 (304)
+|+++.+|+.+.. .++.+.+.|. ..+.||+++++++++
T Consensus 218 ~g~~v~~H~~~~~---------------~i~~~~~~g~----~~i~H~~~~~~~~i~ 255 (408)
T 3be7_A 218 HGMKVAAHAHGLI---------------GIKAAIKAGV----DSVEHASFIDDETID 255 (408)
T ss_dssp TTCEEEEEECSHH---------------HHHHHHHHTC----SEEEECTTCCHHHHH
T ss_pred CCCEEEEEeCCHH---------------HHHHHHHcCC----CEEEECCCCCHHHHH
Confidence 9999999996532 2333334554 368999999988876
No 24
>1yrr_A N-acetylglucosamine-6-phosphate deacetylase; (beta/alpha)8 barrel, beta sandwich, hydrolase; 2.00A {Escherichia coli} SCOP: b.92.1.5 c.1.9.10 PDB: 1ymy_A 2p50_A 2p53_A*
Probab=99.89 E-value=3.3e-24 Score=192.84 Aligned_cols=229 Identities=14% Similarity=0.073 Sum_probs=137.8
Q ss_pred EEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCC
Q 022028 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (304)
Q Consensus 21 ~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~ 100 (304)
++|+|++|++++ .++++++|+|+||||++|++..+. + .+.++||++|++|+|||||+|+|+...
T Consensus 2 ~li~~~~v~~~~---~~~~~~~v~I~~g~I~~vg~~~~~----~-~~~~viD~~g~~v~PGlID~H~H~~~g-------- 65 (382)
T 1yrr_A 2 YALTQGRIFTGH---EFLDDHAVVIADGLIKSVCPVAEL----P-PEIEQRSLNGAILSPGFIDVQLNGCGG-------- 65 (382)
T ss_dssp EEEESSEEECSS---CEESSEEEEEETTEEEEEEEGGGS----C-TTCCEEECTTCEEEECEEEEEESEETT--------
T ss_pred EEEEeeEEEcCC---ceeeCCEEEEECCEEEEEecCCCC----C-ccceeecCCCCEEccCEEEEeecccCC--------
Confidence 579999999865 367889999999999999875432 1 245799999999999999999998641
Q ss_pred CCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC-CH-------HHHHHHHHHcCCeEEeeccccc
Q 022028 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-HV-------SEMAKAVELLGLRACLVQSTMD 172 (304)
Q Consensus 101 ~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~-~~-------~~~~~~~~~~gir~~~~~~~~d 172 (304)
..+..|+ ..+++++++. .+.+++++||||++++... .. ..+.++.++.|.|.. +. .-
T Consensus 66 ~~~~~~~--------~~~~~~~~~~----~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-g~--~~ 130 (382)
T 1yrr_A 66 VQFNDTA--------EAVSVETLEI----MQKANEKSGCTNYLPTLITTSDELMKQGVRVMREYLAKHPNQAL-GL--HL 130 (382)
T ss_dssp EESSSST--------TTSSHHHHHH----HHHHHHHTTEEEEEEEEECCCHHHHHHHHHHHHHHHHHCTTSBC-CE--EE
T ss_pred cCccccc--------cCCCHHHHHH----HHHHHHhCCeEEEEeecCCCCHHHHHHHHHHHHHHhhccCCcee-EE--EE
Confidence 1122221 2345665543 5678999999999986432 11 122333333466632 21 11
Q ss_pred CCCCCCCCcccCChHHHHH-HHHHHHHHHcCCCCCCeEEE-EeeCcccCCCHHHHHHHHHHHHHhCCeeeE-EecCChhh
Q 022028 173 CGEGLPASWAVRTTDDCIQ-SQKELYAKHHHAADGRIRIW-FGIRQIMNATDRLLLETRDMAREFKTGIHM-HVAEIPYE 249 (304)
Q Consensus 173 ~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~-H~~E~~~~ 249 (304)
.++.+.+.+.+....+.++ ..++.++ +...+.+.++.. ++|. +.+.++.+.|+++|+++++ |+.|+..+
T Consensus 131 ~g~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~ik~~~~~~~-------~~~~~~~~~a~~~g~~v~~gH~~~~~~~ 202 (382)
T 1yrr_A 131 EGPWLNLVKKGTHNPNFVRKPDAALVD-FLCENADVITKVTLAPE-------MVPAEVISKLANAGIVVSAGHSNATLKE 202 (382)
T ss_dssp ECSSCCCSCC-CCCSCSCCHHHHHHHH-HHHHTTTTEEEEEECGG-------GSCHHHHHHHHHTTCEEEECSCCCCHHH
T ss_pred eCCcCCccccCCCCHHHccCCCHHHHH-HHHhcCCCEEEEEECCC-------CChHHHHHHHHHCCCEEEEECCCCCHHH
Confidence 2322222111110000011 1123333 222244677642 3332 4455688999999999999 99988887
Q ss_pred HHHHHHhcCCCCCHHHHHH---------HhCCCCC-----Ce---eEEEeccCCcchhc
Q 022028 250 NQVVMDTRKVDHGTVTFLD---------KIEFLQN-----NL---LSAHTVWVNHTEVN 291 (304)
Q Consensus 250 ~~~~~~~~g~~~~~~~~l~---------~~g~l~~-----~~---~~~H~~~l~~~di~ 291 (304)
...+.+ .|.+ .++++. +.|++++ ++ ++.||+++++++++
T Consensus 203 ~~~~~~-~G~~--~~~h~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~h~~~~~~~~~~ 258 (382)
T 1yrr_A 203 AKAGFR-AGIT--FATHLYNAMPYITGREPGLAGAILDEADIYCGIIADGLHVDYANIR 258 (382)
T ss_dssp HHHHHH-HTCC--EESSTTTTSCCBCSSCCHHHHHHHHCTTCEEEEECSSSSSCHHHHH
T ss_pred HHHHHH-cCCC--eeEECCCCCCccccCCcchhhHhhcCCcceeeecCcccccCHHHHH
Confidence 766665 3542 333331 1222221 33 78999999998875
No 25
>2bb0_A Imidazolonepropionase; TIM barrel, hydrolase; 2.00A {Bacillus subtilis} SCOP: b.92.1.10 c.1.9.17 PDB: 2g3f_A
Probab=99.89 E-value=4.5e-22 Score=181.12 Aligned_cols=250 Identities=18% Similarity=0.204 Sum_probs=152.4
Q ss_pred ccEEEEc-cEEEecCCCC----------ceeeeeeEEEeCCEEEEecCCh-hhhhhhcCCCceEEeCCCCEeeccccccC
Q 022028 19 STMILHN-AVIVTMDKES----------RVFRNGGVFVVQDRIKAIGQSA-DILQQFSQMADQIIDLQSQILLPGFVNTH 86 (304)
Q Consensus 19 ~~~li~~-~~ii~~~~~~----------~~~~~~~I~I~~g~I~~i~~~~-~~~~~~~~~~~~vID~~g~iv~PG~ID~H 86 (304)
.+++|+| ++|+++++.. .++.+++|+|+||||++|++.. +. ..+ ..++||++|++|+|||||+|
T Consensus 5 ~d~li~n~g~I~t~~~~~~~~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~--~~~--~~~viD~~G~~v~PGfID~H 80 (421)
T 2bb0_A 5 IDTILINIGQLLTMESSGPRAGKSMQDLHVIEDAVVGIHEQKIVFAGQKGAEA--GYE--ADEIIDCSGRLVTPGLVDPH 80 (421)
T ss_dssp EEEEEEEEEEECCCCCSSCCCGGGGTCCCCEEEEEEEEETTEEEEEEETTTTT--TCE--EEEEEECTTCEEEECEEECC
T ss_pred ccEEEECCcEEEecCCCccccccccccccccccceEEEECCEEEEEecccccc--cCC--CCeEEeCCCCEeccCeeccC
Confidence 4588999 9999876432 3467899999999999998753 10 001 25799999999999999999
Q ss_pred ccchhhhhhcccCCCCcccccccccc--------------CccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC--CCH
Q 022028 87 VHTSQQLAKGIADDVDLMTWLHDRIW--------------PYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--QHV 150 (304)
Q Consensus 87 ~Hl~~s~~~g~~~~~~~~~~l~~~~~--------------~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~--~~~ 150 (304)
+|+.....+. ..+..|+....+ ......++++++..+..++.+++++||||+.+... ...
T Consensus 81 ~H~~~~~~~~----~~~~~~~~g~~~~~~~~~gggi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~~~~~~~ 156 (421)
T 2bb0_A 81 THLVFGGSRE----KEMNLKLQGISYLDILAQGGGILSTVKDTRAASEEELLQKAHFHLQRMLSYGTTTAEVKSGYGLEK 156 (421)
T ss_dssp BCCCCCSCCG----GGHHHHHTTCCHHHHHHTTCTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTTEEEEEEECCSCCSH
T ss_pred cCccccccch----HHHHHHHhCCCHHHHhhcCCCcccchhhhhcCCHHHHHHHHHHHHHHHHhcCceEEEeccccCcCc
Confidence 9997543221 112222211000 00112467777878888899999999999988531 111
Q ss_pred ---HHHHHH----HHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCC-CCCeEEEEeeCcccCCCH
Q 022028 151 ---SEMAKA----VELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAA-DGRIRIWFGIRQIMNATD 222 (304)
Q Consensus 151 ---~~~~~~----~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~ 222 (304)
....++ ....++|........ ...++.+. ......++...+.++.+...+ .+.+.. .. ....+++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~ 229 (421)
T 2bb0_A 157 ETELKQLRVAKKLHESQPVDLVSTFMGA---HAIPPEYQ-NDPDDFLDQMLSLLPEIKEQELASFADI-FT--ETGVFTV 229 (421)
T ss_dssp HHHHHHHHHHHHHHHHSSSEEEEEEEEE---SSCCGGGT-TCHHHHHHHHHTTHHHHHHTTCCSEEEE-BB--CTTSBCH
T ss_pred cchHHHHHHHHHHHhhcCceEEEEeecc---ccCChhhc-ccHHHHHHHHHHhhHHhhccCccccccc-cC--CcCCCCH
Confidence 122223 344466654322110 01122221 112333333222333332111 111211 11 2234588
Q ss_pred HHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------
Q 022028 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN----------- 291 (304)
Q Consensus 223 e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~----------- 291 (304)
+.++++++.|+++|+++++|+.|... + ..++.+.+.|.+ .+.||+++++++++
T Consensus 230 e~l~~~~~~a~~~g~~v~~H~~~~~~--------~----~~~~~~~~~g~~----~~~H~~~~~~~~i~~~~~~g~~~~~ 293 (421)
T 2bb0_A 230 SQSRRYLQKAAEAGFGLKIHADEIDP--------L----GGAELAGKLKAV----SADHLVGTSDEGIKKLAEAGTIAVL 293 (421)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECSSSC--------C----SHHHHHHHTTCS----EEEECTTCCHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHCCCCEEEEeccccc--------c----CHHHHHHHcCCc----EEhhhhcCCHHHHHHHHHcCCeEEE
Confidence 99999999999999999999987542 1 156666666643 58999999999987
Q ss_pred cccccccc
Q 022028 292 CTFGNFKY 299 (304)
Q Consensus 292 ~p~sN~~l 299 (304)
||.+|.++
T Consensus 294 ~p~~~~~l 301 (421)
T 2bb0_A 294 LPGTTFYL 301 (421)
T ss_dssp CHHHHHHT
T ss_pred CCchhhhh
Confidence 88888776
No 26
>2q09_A Imidazolonepropionase; 9252H, NYSGXRC, 3-(2, 5-dioxo-imidazo 4YL)-propionic acid, PSI-2 community, structural genomics, structure initiative; HET: DI6; 1.97A {Unidentified} SCOP: b.92.1.10 c.1.9.17 PDB: 2oof_A*
Probab=99.89 E-value=1.5e-22 Score=184.08 Aligned_cols=251 Identities=14% Similarity=0.142 Sum_probs=154.6
Q ss_pred cEEEEccEEEecCCC---CceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhc
Q 022028 20 TMILHNAVIVTMDKE---SRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (304)
Q Consensus 20 ~~li~~~~ii~~~~~---~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g 96 (304)
+++|+|++++++++. ..++.+++|+|+||||++|++..+.+. + .+.++||++|++|+|||||+|+|+..+..++
T Consensus 6 ~~li~n~~i~t~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~-~--~~~~viD~~G~~v~PG~ID~H~H~~~~~~~~ 82 (416)
T 2q09_A 6 ERVWLNVTPATLRSDLADYGLLEPHALGVHEGRIHALVPMQDLKG-P--YPAHWQDMKGKLVTPGLIDCHTHLIFAGSRA 82 (416)
T ss_dssp SEEEEEEEEBCCCTTSSTTCBCSSEEEEEETTEEEEEEEGGGCC-----CCTTSEECTTCEEEECEEEEEECCCCCSCCH
T ss_pred cEEEEcCeEeccCcccccccccccceEEEECCEEEEEcChhhccc-c--CCCeEEeCCCCEECCcccccccCcchhhhhH
Confidence 578999999987753 245678899999999999997643210 0 1347899999999999999999997643321
Q ss_pred ccCCCCcccccccccc--------------CccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC--CCH-------HHH
Q 022028 97 IADDVDLMTWLHDRIW--------------PYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--QHV-------SEM 153 (304)
Q Consensus 97 ~~~~~~~~~~l~~~~~--------------~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~--~~~-------~~~ 153 (304)
..+..|+....| .....+++++++..++.++.+++++||||+.++.. ... +.+
T Consensus 83 ----~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~ 158 (416)
T 2q09_A 83 ----EEFELRQKGVPYAEIARKGGGIISTVRATRAASEDQLFELALPRVKSLIREGVTTVEIKSGYGLTLEDELKMLRVA 158 (416)
T ss_dssp ----HHHHHHHTTCCHHHHHHTTCTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHTEEEEEEECCSCCSHHHHHHHHHHH
T ss_pred ----HHHHHHHhcCCHHHhhhcCCcEeehhhhccCCCHHHHHHHHHHHHHHHHHcCCcEEEeccCcccChHhHHHHHHHH
Confidence 011122211000 00113467888888888899999999999998542 111 122
Q ss_pred HHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHH-HHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHH
Q 022028 154 AKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQK-ELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMA 232 (304)
Q Consensus 154 ~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a 232 (304)
.++....++|......... .+++.+.. ...+.++... ++++.+... +.....-.......++++.++++++.|
T Consensus 159 ~~~~~~~~~r~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~a 232 (416)
T 2q09_A 159 RRLGEALPIRVKTTLLAAH---AVPPEYRD-DPDSWVETICQEIIPAAAEA--GLADAVDVFCEHIGFSLAQTEQVYLAA 232 (416)
T ss_dssp HHHHHHSSSEEEEEEEEET---SCCGGGTT-CHHHHHHHHHHTHHHHHHHT--TCCSEEEEBBSTTSBCHHHHHHHHHHH
T ss_pred HHHHhhCCceEEEeeeccc---cCCccccC-CHHHHHHHHHhhhhHHHHhc--ccccccccccCCCcCCHHHHHHHHHHH
Confidence 2233456777653321110 11222211 1233444322 234443321 111111112223356889999999999
Q ss_pred HHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------cccccccc
Q 022028 233 REFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKY 299 (304)
Q Consensus 233 ~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l 299 (304)
+++|+++.+|+.+.... ..++.+.+.|. ..+.||+++++++++ ||.+|.++
T Consensus 233 ~~~g~~v~~H~~~~~~~------------~~~~~~~~~g~----~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~ 294 (416)
T 2q09_A 233 DQYGLAVKGHMDQLSNL------------GGSTLAANFGA----LSVDHLEYLDPEGIQALAHRGVVATLLPTAFYFL 294 (416)
T ss_dssp HHTTCEEEEEESSSCCC------------SHHHHHHHTTC----SEEEECTTCCHHHHHHHHHHTCEEEECHHHHHHT
T ss_pred HHCCCcEEEEECCCCch------------HHHHHHHHcCC----CEEeecccCCHHHHHHHHHcCCeEEEcCccHHhh
Confidence 99999999999875420 14555556665 258999999998886 78888766
No 27
>2p9b_A Possible prolidase; protein structure initiative II, PSI-2, amidohydrolase, structural genomics; 1.70A {Bifidobacterium longum NCC2705} SCOP: b.92.1.10 c.1.9.17
Probab=99.89 E-value=5.3e-22 Score=182.61 Aligned_cols=245 Identities=16% Similarity=0.108 Sum_probs=138.6
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEE-eCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhh-
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFV-VQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAK- 95 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I-~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~- 95 (304)
..+++|+|++|++++.. .++.+++|+| +||||++|++..... .+.+.++||++|++|+|||||+|+|+..+..+
T Consensus 12 ~~~~li~n~~i~~~~~~-~~~~~~~v~I~~~g~I~~Vg~~~~~~---~~~~~~viD~~G~~v~PG~ID~H~H~~~~~~~~ 87 (458)
T 2p9b_A 12 EPFALAHATIVTGDKAG-TILRNMTIVVGADGRIEQVAPSIETS---IPAEYHYLDGTGKIVMPGLINAHTHLFSQGKPL 87 (458)
T ss_dssp CCEEEEEEEEECCCTTC-CEEEEEEEEECTTSBEEEEEEGGGCC---CCTTCEEEECTTCEEEECEEEEEECSCC-----
T ss_pred CCcEEEEeeEEEeCCCC-ccccCcEEEEecCCEEEEEeccccCC---CCCCCeEEECCCCEEccceeeeeeccccccccc
Confidence 45689999999997643 5667889999 999999998732211 01246899999999999999999999875533
Q ss_pred cccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC-CHHHHHHHHHHcC----CeEEeeccc
Q 022028 96 GIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-HVSEMAKAVELLG----LRACLVQST 170 (304)
Q Consensus 96 g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~-~~~~~~~~~~~~g----ir~~~~~~~ 170 (304)
+...+.....|+....| ...+++++.+...+.++.+++++||||++++... ......+.+.+.| .|.+.....
T Consensus 88 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~g~~~g~r~~~~g~~ 165 (458)
T 2p9b_A 88 NPKLATPKGQRMVATFA--HSPLGKPYMAATVKHNATTLLESGVTTIRTLGDVGYEVVTLRDQIDAGQILGPRILASGPL 165 (458)
T ss_dssp --------------------------CHHHHHHHHHHHHHHTTEEEEEESCCSSSHHHHHHHHHHTTSSCCCEEECCCSC
T ss_pred cccccchhhhhhhhhhh--hhcccccHHHHHHHHHHHHHHHcCCcEEEeCCCCccccHHHHHHHHcCCCCCCeEEecccc
Confidence 11112222222221111 1123334455566678899999999999998642 2333344444444 355543322
Q ss_pred ccCCCCCCC-Cc--ccCChHHHHHHHHHHHHHHcCCCCCCeEEEEe-----eC-----cccCCCHHHHHHHHHHHHHhCC
Q 022028 171 MDCGEGLPA-SW--AVRTTDDCIQSQKELYAKHHHAADGRIRIWFG-----IR-----QIMNATDRLLLETRDMAREFKT 237 (304)
Q Consensus 171 ~d~g~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-----~~-----~~~~~~~e~l~~~~~~a~~~~~ 237 (304)
+....+... .+ .....++. .+.+++....+.+.+|++.. +. +...++++.++++++.|+++|+
T Consensus 166 ~~~~g~~~~~~~~~~~~~~~~~----~~~~~~~~~~g~~~ik~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~ 241 (458)
T 2p9b_A 166 MAIPEGHGAPLIALTSGTPEEA----RTAVAQNLKAGVNAIKIAATGGVTDAQEIGEAGSPQMSVEQMRAICDEAHQYGV 241 (458)
T ss_dssp EECCCSSCCCCEECCSCCHHHH----HHHHHHHHHTTCSCEEEECSCCTTSCCCC------CCCHHHHHHHHHHHHHTTC
T ss_pred cccCCCCCccccCccCCCHHHH----HHHHHHHHHcCCCEEEEEecCCcCCCCccCCCCCCcCCHHHHHHHHHHHHHCCC
Confidence 211101110 00 11122222 22233322233456776543 22 2346789999999999999999
Q ss_pred eeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc
Q 022028 238 GIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN 291 (304)
Q Consensus 238 ~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~ 291 (304)
++.+|+.+ .... +...+.|. ..+.||+++++++++
T Consensus 242 ~v~~H~~~-~~~i--------------~~~~~~G~----~~i~H~~~~~~~~~~ 276 (458)
T 2p9b_A 242 IVGAHAQS-PEGV--------------RRSLLAGV----DTIEHGSVLDDELIG 276 (458)
T ss_dssp CEEEEECS-HHHH--------------HHHHHHTC----SEEEECCCCCHHHHH
T ss_pred eEEEEeCC-HHHH--------------HHHHHcCC----CEEEECCCCCHHHHH
Confidence 99999853 3222 22223453 368999999987765
No 28
>2puz_A Imidazolonepropionase; NYSGXRC, PSI-2, N-formimino-L- glutamate, product-bound, structural genomics, protein STRU initiative; HET: NIG; 1.83A {Agrobacterium tumefaciens str} SCOP: b.92.1.10 c.1.9.17 PDB: 2gok_A
Probab=99.88 E-value=3.6e-22 Score=181.57 Aligned_cols=255 Identities=16% Similarity=0.181 Sum_probs=151.7
Q ss_pred cccEEEEccEEEecCCC---CceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhh
Q 022028 18 SSTMILHNAVIVTMDKE---SRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLA 94 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~---~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~ 94 (304)
+.+++|+|+.++++++. ..++.+++|+|+||||++|++..+.+..++ .+.++||++|++|+|||||+|+|+.....
T Consensus 14 ~~~~li~n~~i~t~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~-~~~~viD~~G~~v~PG~ID~H~H~~~~~~ 92 (419)
T 2puz_A 14 NATALWRNAQLATLNPAMDGIGAVENAVIAVRNGRIAFAGPESDLPDDLS-TADETTDCGGRWITPALIDCHTHLVFGGN 92 (419)
T ss_dssp -CEEEEEEEEEECCCTTSSTTCEEEEEEEEEETTEEEEEEETTSCCGGGS-CCSEEEECTTCEEEECEEECCCCCCCSSC
T ss_pred CCcEEEECCeEeccCcccccCCcccceEEEEECCEEEEEcChhhhhhhcc-CCCeEEeCCCCEeCcCceecccCccchhh
Confidence 35689999999998753 356678999999999999997643211111 13589999999999999999999965322
Q ss_pred hcccCCCCccccccccc--------------cCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC--CCH---HHHHH
Q 022028 95 KGIADDVDLMTWLHDRI--------------WPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--QHV---SEMAK 155 (304)
Q Consensus 95 ~g~~~~~~~~~~l~~~~--------------~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~--~~~---~~~~~ 155 (304)
+. ..+..|+.... .......++++++..+..++.+++++|+|++.+... ... ....+
T Consensus 93 ~~----~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~ 168 (419)
T 2puz_A 93 RA----MEFEMRLNGATYEEIAKAGGGIVSSVRDTRALSDEVLVAQALPRLDTLLSEGVSTIEIKSGYGLDIETELKMLR 168 (419)
T ss_dssp CH----HHHHHHHTTCCHHHHHHTTCSHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTTEEEEEEECCSCCSHHHHHHHHH
T ss_pred hH----HHHHHHhcCCCHHHHHhcCCCeecchhhhccCCHHHHHHHHHHHHHHHHhcCCeEEEeCCCCCCCchhHHHHHH
Confidence 11 00111111000 000112457777777788889999999999987432 111 12334
Q ss_pred HHHH----cCCeEEeecccccCCCCCCCCcccCChHHHHHHH-HHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHH
Q 022028 156 AVEL----LGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQ-KELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRD 230 (304)
Q Consensus 156 ~~~~----~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~ 230 (304)
++.+ .++|....... ....++.+. ......++.. .+.++.+... +.....-.......++++.++++++
T Consensus 169 ~~~~~~~~~~~r~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (419)
T 2puz_A 169 VARRLETLRPVRIVTSYLA---AHATPADYK-GRNADYITDVVLPGLEKAHAE--GLADAVDGFCEGIAFSVKEIDRVFA 242 (419)
T ss_dssp HHHHHTTTSSCEEEEEECC---TTCCCGGGT-TCHHHHHHHTHHHHHHHHHHT--TCCSEECCEESTTSBCHHHHHHHHH
T ss_pred HHHHHhhhcCceEEEEecc---cccCchhhc-ccHHHHHHHHHhhhhhhhhhc--ccccccccccCCCCcCHHHHHHHHH
Confidence 4433 34554322111 011122221 1123333322 2233333321 1111110111123457899999999
Q ss_pred HHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc-----------cccccccc
Q 022028 231 MAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN-----------CTFGNFKY 299 (304)
Q Consensus 231 ~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~-----------~p~sN~~l 299 (304)
.|+++|+++.+|+.+.... ..++.+.+.|.. .+.||.++++++++ ||.+|..+
T Consensus 243 ~a~~~g~~v~~H~~~~~~~------------~~~~~~~~~g~~----~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~l 306 (419)
T 2puz_A 243 AAQQRGLPVKLHAEQLSNL------------GGAELAASYNAL----SADHLEYLDETGAKALAKAGTVAVLLPGAFYAL 306 (419)
T ss_dssp HHHHTTCCBEEEESSSSCC------------SHHHHHHHTTCS----EEEECTTCCHHHHHHHHHHTCEEEECHHHHHHH
T ss_pred HHHHCCCcEEEEecccccC------------CHHHHHHhcCCc----eehHhccCCHHHHHHHHHcCCcEEECCchhhhh
Confidence 9999999999999875320 156666666653 47899999999886 78777665
No 29
>2vhl_A N-acetylglucosamine-6-phosphate deacetylase; N- acetyleglucosamine-6-phosphate, carbohydrate metabolism, hydrolase; HET: GLP PGE; 2.05A {Bacillus subtilis}
Probab=99.84 E-value=2.1e-21 Score=175.26 Aligned_cols=227 Identities=16% Similarity=0.194 Sum_probs=133.6
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCC-CCEeeccccccCccchhhhhhc
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQ-SQILLPGFVNTHVHTSQQLAKG 96 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~-g~iv~PG~ID~H~Hl~~s~~~g 96 (304)
+.+++|+|++|++++ .++.+++|+|+||||++|++..+. . .+.++||++ |++|+|||||+|+|+..+.
T Consensus 2 ~~~~li~~~~v~~~~---~~~~~~~v~I~~g~I~~ig~~~~~----~-~~~~viD~~~g~~v~PGlID~H~H~~~~~--- 70 (396)
T 2vhl_A 2 AESLLIKDIAIVTEN---EVIKNGYVGINDGKISTVSTERPK----E-PYSKEIQAPADSVLLPGMIDIHIHGGYGA--- 70 (396)
T ss_dssp -CCEEEEEEEEECSS---CEEEEEEEEEETTEEEEEESSCCS----S-CCSEEEECCTTCEEEECEEEEEECEETTE---
T ss_pred CccEEEEeeEEEcCC---ccccCceEEEECCEEEEEECCCCC----C-CCCceEcCCCCCEEcCCEEEEeecCCcCc---
Confidence 346899999999865 356789999999999999832110 1 145899999 9999999999999996631
Q ss_pred ccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC-CHH-------HHHHHHHH-c----CC-
Q 022028 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-HVS-------EMAKAVEL-L----GL- 162 (304)
Q Consensus 97 ~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~-~~~-------~~~~~~~~-~----gi- 162 (304)
+ +. ..++++++ .++.+++++||||++++... ... ...+...+ . |.
T Consensus 71 -----~---~~---------~~~~e~~~----~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~g~~ 129 (396)
T 2vhl_A 71 -----D---TM---------DASFSTLD----IMSSRLPEEGTTSFLATTITQEHGNISQALVNAREWKAAEESSLLGAE 129 (396)
T ss_dssp -----E---GG---------GCSHHHHH----HHHHHGGGGTEEEEEEECCSCCHHHHHHHHHHHHHHHHHCSGGGSSSE
T ss_pred -----c---cc---------CCCHHHHH----HHHHHHHcCCeeEEEecccCCCHHHHHHHHHHHHHHHhcccccccccc
Confidence 1 10 13456554 35778999999999997632 221 12222222 2 32
Q ss_pred -eEE-eecccccC-CCCCC-CCcccCChHHHHHHHHHHHHHHcCCCCCCeE-EEEeeCcccCCCHHHHHHHHHHHHHhCC
Q 022028 163 -RAC-LVQSTMDC-GEGLP-ASWAVRTTDDCIQSQKELYAKHHHAADGRIR-IWFGIRQIMNATDRLLLETRDMAREFKT 237 (304)
Q Consensus 163 -r~~-~~~~~~d~-g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~e~l~~~~~~a~~~~~ 237 (304)
+.+ ....+.+. ..+.. ...... ...+.++++.....+.++ +.++|+.+.. + ++.+.|+++|+
T Consensus 130 ~~~~~~~~~~~~~~~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~ik~~~~~p~~~~~-----~-~~~~~a~~~g~ 196 (396)
T 2vhl_A 130 LLGIHLEGPFVSPKRAGAQPKEWIRP-------SDVELFKKWQQEAGGLIKIVTLAPEEDQH-----F-ELIRHLKDESI 196 (396)
T ss_dssp EEEEEEECSSSCGGGCTTSCGGGCCC-------CCHHHHHHHHHHTTTCEEEEEECGGGSGG-----G-HHHHHHHHTTC
T ss_pred eEEEeeecCccCccccCCCCHHHccC-------CCHHHHHHHHHhcCCcceEEEECCCCCCH-----H-HHHHHHHHCCC
Confidence 221 11111110 00100 011100 112233333322346676 4456654432 2 46788899999
Q ss_pred eeeE-EecCChhhHHHHHHhcCCC--------CCHHHHHHHhCCCC-----CCe---eEEEeccCCcchhc
Q 022028 238 GIHM-HVAEIPYENQVVMDTRKVD--------HGTVTFLDKIEFLQ-----NNL---LSAHTVWVNHTEVN 291 (304)
Q Consensus 238 ~~~~-H~~E~~~~~~~~~~~~g~~--------~~~~~~l~~~g~l~-----~~~---~~~H~~~l~~~di~ 291 (304)
++++ |+.|+..+.+.+.+ .|.. .+++++ ++.|+++ +++ ++.||++++++++.
T Consensus 197 ~v~~gH~~~~~~~~~~a~~-~G~~~i~H~~~~~~~~~~-~~~G~~~~~~~~~~~~~e~~~h~~~l~~~~~~ 265 (396)
T 2vhl_A 197 IASMGHTDADSALLSDAAK-AGASHMTHLYNAMSPFHH-REPGVIGTALAHDGFVTELIADGIHSHPLAAK 265 (396)
T ss_dssp EEEECSBCCCHHHHHHHHH-TTCCEESSTTSSBCCCCS-SSCHHHHHHHHCTTCEEEEECSSSSSCHHHHH
T ss_pred EEeecccCCCHHHHHHHHH-cCCCEeEeCCccCccccc-CCCCchhhhhcCCCcEEEEcCCccccCHHHHH
Confidence 9999 99999888877766 3321 012221 2233332 444 78999999988765
No 30
>3ooq_A Amidohydrolase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, H PSI-2; 2.06A {Thermotoga maritima}
Probab=99.83 E-value=1e-21 Score=177.47 Aligned_cols=114 Identities=21% Similarity=0.389 Sum_probs=90.9
Q ss_pred ccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhccc
Q 022028 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (304)
Q Consensus 19 ~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~ 98 (304)
.+++|+|++|+++++ .... ++|+|+||||++|++..+ +.+.++||++|++|+|||||+|+|+..+.. +..
T Consensus 5 ~~~~i~~~~i~~~~~--~~~~-~~v~i~~g~I~~i~~~~~------~~~~~~id~~g~~~~Pg~~d~h~h~~~~~~-~~~ 74 (396)
T 3ooq_A 5 VKILFKNATVFPITS--RPFK-GDVLVSNGKVEKVGENIE------DPDAEIVDLTGKFLFPGFVDAHSHIGLFEE-GVG 74 (396)
T ss_dssp -CEEEEEEEECCSSS--CCEE-EEEEEETTEEEEEESCCC------CTTSEEEECTTCEEEECEEEEEECTTTSCT-TSC
T ss_pred ceEEEECcEEEeCCC--CeEE-eEEEEECCEEEEecCCCC------CCCCeEEECCCCEEecCEEecccccCcccc-Ccc
Confidence 457899999999763 3444 899999999999998653 135789999999999999999999987554 111
Q ss_pred CCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecC
Q 022028 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEA 145 (304)
Q Consensus 99 ~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~ 145 (304)
.-..|+.+..++....++.++.+.....++.+++++||||+.++
T Consensus 75 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~ 118 (396)
T 3ooq_A 75 ---YYYSDGNEATDPVTPHVKALDGFNPQDPAIERALAGGVTSVMIV 118 (396)
T ss_dssp ---GGGCCSCCTTCSBCTTCBGGGGCCTTCHHHHHHHTTTEEEEEEC
T ss_pred ---ccccccccccCccCccccHhhhcCcCcHHHHHHHhCCeEEEecc
Confidence 11467777777887888888877777778889999999999987
No 31
>2fty_A Dihydropyrimidinase; alpha/beta barrel, beta-sandwich, hydrolase; HET: KCX; 2.40A {Lachancea kluyveri} SCOP: b.92.1.3 c.1.9.6 PDB: 2fvk_A* 2fvm_A*
Probab=99.83 E-value=2e-19 Score=169.01 Aligned_cols=190 Identities=15% Similarity=0.178 Sum_probs=123.1
Q ss_pred cEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccC
Q 022028 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (304)
Q Consensus 20 ~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~ 99 (304)
+++|+|++|++++. . .+++|+|+||||++|++..+. + .+.++||++|++|+|||||+|+|+..+...+
T Consensus 4 ~~li~n~~vv~~~~---~-~~~~v~I~~g~I~~Ig~~~~~----~-~~~~viD~~g~~v~PGlID~H~H~~~~~~~~--- 71 (559)
T 2fty_A 4 DLIIKNGIICTASD---I-YAAEIAVNNGKVQLIAASIDP----S-LGSEVIDAEGAFITPGGIDAHVHVDEPLKLL--- 71 (559)
T ss_dssp EEEEESCEEECSSC---E-EECEEEEETTEEEEEESCCCG----G-GEEEEEECTTCEEEECEEECCBCCCCTTCTT---
T ss_pred eEEEECcEEEcCCC---c-eeeeEEEECCEEEEecCCCCC----C-CCCeEEeCCCCEEEcCEEeeccCcCcccccc---
Confidence 57999999998652 2 578999999999999875431 1 2458999999999999999999997632100
Q ss_pred CCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCCC-----HHHHHHHH----HHcCCe-EEeecc
Q 022028 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-----VSEMAKAV----ELLGLR-ACLVQS 169 (304)
Q Consensus 100 ~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~-----~~~~~~~~----~~~gir-~~~~~~ 169 (304)
..++++++.. ...++++||||++++.... ...+.+++ ++.+.+ ..+...
T Consensus 72 -----------------~~~~e~~~~~----~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 130 (559)
T 2fty_A 72 -----------------GDVVDTMEHA----TRSAVAGGTTTVVAFSTQDVSKKGPSALAESVKLDVDEYSEQTLYCDYG 130 (559)
T ss_dssp -----------------SCCSCCHHHH----HHHHHHTTEEEEEEEEECCTTCCSTTHHHHHHHHHHHHHTTSCCSSEEE
T ss_pred -----------------CCCHHHHHHH----HHHHHhCcEEEEEECcCcccCCcchHHHHHHHHHHHHHHHhhcceeEEE
Confidence 0023333333 3456899999999975322 12244555 555554 211110
Q ss_pred cccCCCCCCCCcccCChHH---HH-HHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecC
Q 022028 170 TMDCGEGLPASWAVRTTDD---CI-QSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAE 245 (304)
Q Consensus 170 ~~d~g~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E 245 (304)
+... ...+. ....+ .+ ++..++++++ +...+++.+++++ +.++++.++++++.|+++|+++++|+ |
T Consensus 131 ~~~~----~~~~~-~~~~~~g~~l~~~~~~l~~~~---G~~~iki~~~~~~-~~~s~e~l~~~~~~A~~~g~~v~~H~-e 200 (559)
T 2fty_A 131 LHLI----LFQIE-KPSVEARELLDVQLQAAYNDY---GVSSVKMFMTYPG-LQISDYDIMSAMYATRKNGFTTMLHA-E 200 (559)
T ss_dssp EEEE----CCCCC-SSHHHHHHHHHHHHHHHHHHH---CCCEEEEESSSTT-TBCCHHHHHHHHHHHHHHTCEEEEEC-C
T ss_pred eeee----eccCc-CCCchhhhhHHHHHHHHHHHC---CCCEEEEEecCCC-CcCCHHHHHHHHHHHHhCCCEEEEEC-C
Confidence 1000 00110 01233 45 5566666444 2356787777766 67899999999999999999999998 5
Q ss_pred ChhhHHH
Q 022028 246 IPYENQV 252 (304)
Q Consensus 246 ~~~~~~~ 252 (304)
.......
T Consensus 201 ~~~~i~~ 207 (559)
T 2fty_A 201 NGDMVKW 207 (559)
T ss_dssp CHHHHHH
T ss_pred ChHHHHH
Confidence 5554443
No 32
>2vr2_A Dihydropyrimidinase; hydantoinase, metal-binding, disease mutation, dihydropyrimi amidohydrolase, nucleotide metabolism, DPYS, dhpase, hydrolase; 2.80A {Homo sapiens}
Probab=99.81 E-value=8.6e-20 Score=171.22 Aligned_cols=191 Identities=17% Similarity=0.214 Sum_probs=113.2
Q ss_pred ccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhccc
Q 022028 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (304)
Q Consensus 19 ~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~ 98 (304)
.+++|+|++|++.+ .. .+++|+|+||||++|++..+.+... ..+.++||++|++|+|||||+|+|+..... +
T Consensus 27 ~~~lI~ng~Vv~~~---~~-~~~dV~I~dGrI~~Ig~~~~~~~~~-~~~~~vIDa~G~~V~PG~ID~H~Hl~~~~~-~-- 98 (541)
T 2vr2_A 27 SRLLIRGGRVVNDD---FS-EVADVLVEDGVVRALGHDLLPPGGA-PAGLRVLDAAGKLVLPGGIDTHTHMQFPFM-G-- 98 (541)
T ss_dssp CEEEEESCEEECSS---CE-EECEEEEETTEEEEEEC------------CEEEECTTSEEEECEEEEEECTTCBCS-S--
T ss_pred CCEEEECcEEEcCC---Cc-eEeeEEEECCEEEEeccCCCCCccc-ccCceEEECCCCEEccCEEEecccCCCCCC-C--
Confidence 56899999999854 23 4689999999999999764321000 012389999999999999999999965210 0
Q ss_pred CCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCCC-HHHHHHHHHHcCCeEEeecccccCCCCC
Q 022028 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-VSEMAKAVELLGLRACLVQSTMDCGEGL 177 (304)
Q Consensus 99 ~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~-~~~~~~~~~~~gir~~~~~~~~d~g~~~ 177 (304)
..++++++.. ...++++||||++++.... ...+.++++..+.+.. .....+.+...
T Consensus 99 ------------------~~~~e~~~~~----~~~al~~GvTtv~d~~~~~~~~~~~~a~~~~~~~~~-~~~~~~~g~h~ 155 (541)
T 2vr2_A 99 ------------------SRSIDDFHQG----TKAALSGGTTMIIDFAIPQKGGSLIEAFETWRSWAD-PKVCCDYSLHV 155 (541)
T ss_dssp ------------------SBCSCCTTHH----HHHHHTTTEEEEEEEECCCTTCCHHHHHHHHHHHHT-TTCSSEEEEEE
T ss_pred ------------------CcCHHHHHHH----HHHHHhCCeeeeccccCCCCCCCHHHHHHHHHHHhc-cCceEEEeeee
Confidence 0112223322 2346789999999864211 1112222222222110 00011110000
Q ss_pred -CCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChh
Q 022028 178 -PASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPY 248 (304)
Q Consensus 178 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~ 248 (304)
.+.+ .....++..++++. .+...+++++++++.+.++++.++++++.|+++++.+++|+ |...
T Consensus 156 ~~~~~----~~~~~~el~~l~~~---~G~~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-e~~~ 219 (541)
T 2vr2_A 156 AVTWW----SDQVKEEMKILVQD---KGVNSFKMFMAYKDLYMVTDLELYEAFSRCKEIGAIAQVHA-ENGD 219 (541)
T ss_dssp EECSC----SHHHHHHHHHHHHT---SCCCEEEEESSSTTTTBCCHHHHHHHHHHHHHHTCEEEEEC-SCHH
T ss_pred cccCC----CHHHHHHHHHHHHh---CCCCEEEEEeccCCccCCCHHHHHHHHHHHHHcCCEEEEEc-CCHH
Confidence 0011 12333444444432 23456777777777788999999999999999999999997 6654
No 33
>2vm8_A Dihydropyrimidinase-related protein 2; neurogenesis, phosphoprotein, differentiation, CRMP, cytoplasm, TIM barrel, polymorphism, axonal pathfinding; 1.9A {Homo sapiens} PDB: 2gse_A 1kcx_A
Probab=99.80 E-value=2.5e-18 Score=159.85 Aligned_cols=181 Identities=13% Similarity=0.190 Sum_probs=113.4
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcc
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~ 97 (304)
+.+++|+|++|++++ .. .+++|+|+||||++|++..+. +.+.++||++|++|+|||||+|+|+....+ +.
T Consensus 25 ~~~~li~n~~v~~~~---~~-~~~~V~I~~grI~~Ig~~~~~-----~~~~~vID~~G~~v~PGlID~H~H~~~~~~-~~ 94 (501)
T 2vm8_A 25 SDRLLIKGGKIVNDD---QS-FYADIYMEDGLIKQIGENLIV-----PGGVKTIEAHSRMVIPGGIDVHTRFQMPDQ-GM 94 (501)
T ss_dssp CCCEEEEEEEEECSS---CE-EEEEEEEETTEEEEEESSCCC-----CSSSCEEECTTCEEEECEEEEEECTTCEET-TE
T ss_pred cCCEEEEeeEEECCC---Cc-eEeeEEEECCEEEEeccCCCC-----CCCCeEEECCCCEEeeCEEEeeeccccccc-CC
Confidence 356899999999865 23 568999999999999975431 124589999999999999999999965321 10
Q ss_pred cCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC----CHHHHHHHHHHcCCe---EEeeccc
Q 022028 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----HVSEMAKAVELLGLR---ACLVQST 170 (304)
Q Consensus 98 ~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~----~~~~~~~~~~~~gir---~~~~~~~ 170 (304)
.++++++. ...+++++||||++++... .....++...+.+.+ ...+..
T Consensus 95 --------------------~~~e~~~~----~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~- 149 (501)
T 2vm8_A 95 --------------------TSADDFFQ----GTKAALAGGTTMIIDHVVPEPGTSLLAAFDQWREWADSKSCCDYSLH- 149 (501)
T ss_dssp --------------------ECSSCHHH----HHHHHHHTTEEEEEEEECCCTTSCHHHHHHHHHHHHHHHCSSEEEEE-
T ss_pred --------------------CcHHHHHH----HHHHHHhCCcEEEEeCCCCCCCCChHHHHHHHHHHHhcCCeeEEEEE-
Confidence 01223332 2347899999999986421 122223222222111 011110
Q ss_pred ccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecC
Q 022028 171 MDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAE 245 (304)
Q Consensus 171 ~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E 245 (304)
..+++ + .....++.++++++ .+...+++++++......+++.++++++.|+++++++.+|+.+
T Consensus 150 -~~~~~----~----~~~~~~e~~~l~~~---~G~~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~ 212 (501)
T 2vm8_A 150 -VDISE----W----HKGIQEEMEALVKD---HGVNSFLVYMAFKDRFQLTDCQIYEVLSVIRDIGAIAQVHAEN 212 (501)
T ss_dssp -EECCS----C----SHHHHHHHHHHHHH---SCCCEEEEESSSTTTTBCCHHHHHHHHHHHHHHTCEEEEECCC
T ss_pred -EEecC----C----CcccHHHHHHHHHh---CCceEEEEeeccCCCCCCCHHHHHHHHHHHHHhCCEEEEEccC
Confidence 01111 1 11223344444433 2334566666555556789999999999999999999999743
No 34
>2vun_A Enamidase; nicotinate degradation, binuclear metal center, amidohydrolases, stereospecificity, hydrolase; 1.89A {Eubacterium barkeri}
Probab=99.79 E-value=4.2e-19 Score=159.51 Aligned_cols=216 Identities=19% Similarity=0.142 Sum_probs=124.9
Q ss_pred cccEEEEccEE-EecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCC-ceEEeCCCCEeeccccccCccchhhhhh
Q 022028 18 SSTMILHNAVI-VTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMA-DQIIDLQSQILLPGFVNTHVHTSQQLAK 95 (304)
Q Consensus 18 ~~~~li~~~~i-i~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~-~~vID~~g~iv~PG~ID~H~Hl~~s~~~ 95 (304)
|.+++|+|++| ++++....++.+++|+|+||||++|++..... +.+ .++||++|++|+|||||+|+|+...
T Consensus 1 m~~~li~n~~v~~~~~~~~~~~~~~~v~I~~g~I~~Ig~~~~~~----~~~~~~viD~~g~~v~PGlID~H~H~~~~--- 73 (386)
T 2vun_A 1 MSKTIIKNIGKIVSGDIKSPVLQADTIVVEDGLIAAIGGEELMK----DAGDATIIDAAGSTVTPGLLDTHVHVSGG--- 73 (386)
T ss_dssp -CEEEEESCSEEECSCTTSCEECCSEEEEETTEEEEEESGGGGT----TCTTCEEEECTTCEEEECEEEEEECCCST---
T ss_pred CccEEEeccEEEEcCCCCccccccceEEEECCEEEEecCccccC----CCCCceEEcCCCCEEccceeeccccccCC---
Confidence 35689999999 98764323467899999999999998743211 123 5899999999999999999999631
Q ss_pred cccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCC-----CCC--HHHHH--HHHHH---cCCe
Q 022028 96 GIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-----GQH--VSEMA--KAVEL---LGLR 163 (304)
Q Consensus 96 g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~-----~~~--~~~~~--~~~~~---~gir 163 (304)
.|.. +..+..++.+++++||||++++. ... ...+. +.... .+.+
T Consensus 74 ---------~~~~---------------~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (386)
T 2vun_A 74 ---------DYAP---------------RQKTMDFISSALHGGVTTMISAGSPHFPGRPKDAAGTKALAITLSKSYYNAR 129 (386)
T ss_dssp ---------TEEG---------------GGTEESHHHHHHTTTEEEEEECCCTTSTTCCCSHHHHHHHHHHHHHHHHHCC
T ss_pred ---------CcCh---------------hHHHHHHHHHHHhCCceEEEeccccccCCChhhHHHHHHHHHHhhccccccc
Confidence 2210 01111245678999999999965 111 21111 11111 1111
Q ss_pred EEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEe
Q 022028 164 ACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHV 243 (304)
Q Consensus 164 ~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~ 243 (304)
. +......| .+ .... ... .+..+++++ .+.+.++.... + ..++++.+++++++|+++|+++.+|+
T Consensus 130 ~--~~~~~~~g--~~-~~~~-~~~--~~~~~~~~~----~g~~~ik~~~~--~-~~~~~~~l~~~~~~a~~~g~~v~~H~ 194 (386)
T 2vun_A 130 P--AGVKVHGG--AV-ILEK-GLT--EEDFIEMKK----EGVWIVGEVGL--G-TIKNPEDAAPMVEWAHKHGFKVQMHT 194 (386)
T ss_dssp G--GGCEEECC--EE-CCCT-TCC--HHHHHHHHH----TTCCEEEEETS--S-SCCSHHHHHHHHHHHHHTTCEEEEEC
T ss_pred c--cceeeccC--cc-cccC-CcC--HHHHHHHHH----hCCCeEEEeec--C-CCCCHHHHHHHHHHHHHCCCeEEEec
Confidence 0 00000001 00 0000 011 122333332 23345664422 1 12588999999999999999999999
Q ss_pred cCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEecc----CCcchhc
Q 022028 244 AEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVW----VNHTEVN 291 (304)
Q Consensus 244 ~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~----l~~~di~ 291 (304)
.|..... .+. ..++.+.+.|. + .+.||++ +++++++
T Consensus 195 ~~~~~~~------~~~--~~i~~~~~~G~---~-~i~H~~~~~~~~~~~~~~ 234 (386)
T 2vun_A 195 GGTSIPG------SST--VTADDVIKTKP---D-VVSHINGGPTAISVQEVD 234 (386)
T ss_dssp SCCSCST------TCS--CCHHHHHHHCC---S-EEETTTCSSSCCCHHHHH
T ss_pred CCccccc------cCH--HHHHHHHHcCC---C-EEEEccCCCCCCCHHHHH
Confidence 7542110 000 13444555665 3 5899988 7777665
No 35
>2ftw_A Dihydropyrimidine amidohydrolase; (beta-alpha)8-barrel, beta-sandwich; HET: KCX; 2.05A {Dictyostelium discoideum} SCOP: b.92.1.3 c.1.9.6
Probab=99.79 E-value=6.8e-19 Score=164.42 Aligned_cols=188 Identities=18% Similarity=0.236 Sum_probs=115.4
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcc
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~ 97 (304)
+.+++|+|++|++.+ .. .+++|+|+||||++|++..+. +.+.++||++|++|+|||||+|+|+.....
T Consensus 7 ~~~~lI~n~~vv~~~---~~-~~~~V~I~dG~I~~Ig~~~~~-----~~~~~vIDa~G~~v~PGlID~H~H~~~~~~--- 74 (521)
T 2ftw_A 7 TGTILIKNGTVVNDD---RY-FKSDVLVENGIIKEISKNIEP-----KEGIKVVDATDKLLLPGGIDTHTHFQLPFM--- 74 (521)
T ss_dssp CCCEEEESCEEECSS---CE-EECEEEEETTEEEEEESCCCC-----CSSCCEEECTTCEEEECEEEEEECTTCEET---
T ss_pred cCCEEEECcEEECCC---Cc-eeeeEEEECCEEEEecCCCCC-----CCCCeEEECCCCEEecCEEeeecccCcCCC---
Confidence 456899999999854 23 478999999999999875421 124589999999999999999999965210
Q ss_pred cCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCCC-HHHHHHHHHHcCCeEEeecccccCCCC
Q 022028 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-VSEMAKAVELLGLRACLVQSTMDCGEG 176 (304)
Q Consensus 98 ~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~-~~~~~~~~~~~gir~~~~~~~~d~g~~ 176 (304)
. ..++++++..+ ..++++||||++++.... ...+.+++...+.+.. .....+.+..
T Consensus 75 -------~-----------~~~~e~~~~~~----~~a~~~G~Ttv~d~~~~~~~~~~~~a~~~~~~~~~-~~~~~~~g~h 131 (521)
T 2ftw_A 75 -------G-----------TVSVDDFDIGT----QAAVAGGTTFIIDFVIPTRGQSLLEAYDQWKKWAD-EKVNCDYSLH 131 (521)
T ss_dssp -------T-----------EECSSCHHHHH----HHHHHTTEEEEEEEECCCTTCCHHHHHHHHHHHHH-TTCSSEEEEE
T ss_pred -------C-----------ccCHHHHHHHH----HHHHhCCcceecCcCCCCCCcCHHHHHHHHHHHhh-cCceeeEeeE
Confidence 0 01233444433 446789999999864211 1112222222211110 0000010000
Q ss_pred C-CCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChh
Q 022028 177 L-PASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPY 248 (304)
Q Consensus 177 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~ 248 (304)
. .+.+ .....++..+++++ .+...++++++++..+.++++.++++++.|+++++++.+|+ |...
T Consensus 132 ~~~~~~----~~~~~~~l~~l~~~---~G~~~~k~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~vH~-e~~~ 196 (521)
T 2ftw_A 132 VAITWW----SEQVSREMEILVKE---RGVNSFKCFMAYKNSFMVTDQEMYHIFKRCKELGAIAQVHA-ENGD 196 (521)
T ss_dssp EECCSC----CHHHHHHHHHHHHH---SCCCEEEEESSCTTTTBCCHHHHHHHHHHHHHHTCEEEEEC-SCHH
T ss_pred EeecCC----ChhHHHHHHHHHHh---CCCCEEEEEeccCCCcCCCHHHHHHHHHHHHHcCCEEEEEc-CCHH
Confidence 0 0111 12333444455543 23356777777777778999999999999999999999997 5543
No 36
>1gkp_A Hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX EPE; 1.29A {Thermus SP} SCOP: b.92.1.3 c.1.9.6 PDB: 1gkq_A*
Probab=99.79 E-value=1e-18 Score=160.48 Aligned_cols=187 Identities=16% Similarity=0.238 Sum_probs=117.2
Q ss_pred EEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCC
Q 022028 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (304)
Q Consensus 21 ~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~ 100 (304)
++|+|++|++++ .. .+++|+|+||||++|++..+. +.+.++||++|++|+|||||+|+|+..... +
T Consensus 2 ~li~n~~vv~~~---~~-~~~~v~I~~g~I~~ig~~~~~-----~~~~~viD~~G~~v~PGlID~H~H~~~~~~-~---- 67 (458)
T 1gkp_A 2 LLIKNGEIITAD---SR-YKADIYAEGETITRIGQNLEA-----PPGTEVIDATGKYVFPGFIDPHVHIYLPFM-A---- 67 (458)
T ss_dssp EEEESCEEEETT---EE-EECEEEESSSBCCEEESCCCC-----CTTCEEEECTTSEEEECEEEEEECSSCEET-T----
T ss_pred EEEEeeEEECCC---Cc-eEeeEEEECCEEEEecCCCCC-----CCCCeEEECCCCEEecCEEecccCCCcCCC-C----
Confidence 689999999865 22 578999999999999875421 124689999999999999999999965210 0
Q ss_pred CCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC----CHHHHHHHHHHc-CCeEEeecccccCCC
Q 022028 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----HVSEMAKAVELL-GLRACLVQSTMDCGE 175 (304)
Q Consensus 101 ~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~----~~~~~~~~~~~~-gir~~~~~~~~d~g~ 175 (304)
..++++++..+ ..++++||||++++... .....++...+. .-+......+....+
T Consensus 68 ----------------~~~~~~~~~~~----~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (458)
T 1gkp_A 68 ----------------TFAKDTHETGS----KAALMGGTTTYIEMCCPSRNDDALEGYQLWKSKAEGNSYCDYTFHMAVS 127 (458)
T ss_dssp ----------------EECSCCHHHHH----HHHHHTTEEEEEEEECCCTTSCHHHHHHHHHHHHTTTCSSEEEEEEECC
T ss_pred ----------------CcCHhHHHHHH----HHHHhCCccEEEeCCCCCCCCCHHHHHHHHHHHhccCceeeEEEEEeec
Confidence 01123333332 34578999999986421 222222222211 111110000000000
Q ss_pred CCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHH
Q 022028 176 GLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVM 254 (304)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~ 254 (304)
.. .++.+++.+++++. +...+++.+.++....++++.+.++.+.|+++++++++|+ |+..+.+.+.
T Consensus 128 ----~~----~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~-e~~~~~~~~~ 193 (458)
T 1gkp_A 128 ----KF----DEKTEGQLREIVAD----GISSFKIFLSYKNFFGVDDGEMYQTLRLAKELGVIVTAHC-ENAELVGRLQ 193 (458)
T ss_dssp ----CC----CTTHHHHHHHHHHT----TCCEEEEEECSTTTTBCCHHHHHHHHHHHHHHTCEEEEEE-SCHHHHHHHH
T ss_pred ----CC----chhhHHHHHHHHHh----CCCEEEEEeccCCCcCCCHHHHHHHHHHHHhcCCEEEEEc-CCHHHHHHHH
Confidence 01 11233444455443 2345677777777678899999999999999999999998 7776665543
No 37
>1e9y_B Urease subunit beta; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.92.1.1 c.1.9.2 PDB: 1e9z_B* 3qga_C* 3qgk_C*
Probab=99.78 E-value=2.6e-18 Score=161.14 Aligned_cols=165 Identities=19% Similarity=0.254 Sum_probs=111.7
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhh-------hhhcCCCceEEeCCCCEeeccccccCccch
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADIL-------QQFSQMADQIIDLQSQILLPGFVNTHVHTS 90 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~-------~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~ 90 (304)
..+++|+|++|++.. . +.+++|+|+||||++|++..++. ....+.+.++||++|++|+|||||+|+|+.
T Consensus 65 ~~dllI~n~~Vid~~---g-i~~~dI~I~dGrI~~IG~~~~~~~~~~~~~~~~~~~~~evIDa~G~iV~PGlID~HvHl~ 140 (569)
T 1e9y_B 65 ELDLIITNALIVDYT---G-IYKADIGIKDGKIAGIGKGGNKDMQDGVKNNLSVGPATEALAGEGLIVTAGGIDTHIHFI 140 (569)
T ss_dssp CCSEEEEEEEEEETT---E-EEEEEEEEETTEEEEEECCBCTTTSSSCCGGGBCCTTCEEEECTTCEEEECEEEEEEETT
T ss_pred cCCEEEEeeEEECCC---C-cEeeeEEEECCEEEEeecCCCccccccccccccCCCCCeEEECCCCEEecCEEEEeecCC
Confidence 446899999999843 3 46789999999999999764310 000122568999999999999999999984
Q ss_pred hhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC---------------CHHHHHH
Q 022028 91 QQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---------------HVSEMAK 155 (304)
Q Consensus 91 ~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~---------------~~~~~~~ 155 (304)
. +.. +.+++++||||+++++.. ..+.+.+
T Consensus 141 ~----------------------------p~~--------~~~al~~GvTTv~d~g~~p~~~t~~~~~~~g~~~l~~~~~ 184 (569)
T 1e9y_B 141 S----------------------------PQQ--------IPTAFASGVTTMIGGGTGPADGTNATTITPGRRNLKWMLR 184 (569)
T ss_dssp C----------------------------TTH--------HHHHHHTTEEEEEEECCSSCHHHHHCCCCCHHHHHHHHHH
T ss_pred C----------------------------cHH--------HHHHHhCCeeEEEcCCcCCCCCCcCcccCCcHHHHHHHHH
Confidence 2 101 356899999999997421 1233456
Q ss_pred HHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHh
Q 022028 156 AVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF 235 (304)
Q Consensus 156 ~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~ 235 (304)
+++..+++..+... + .. ... +..+++++. |. .++.++..+.++++.++++++.|+++
T Consensus 185 a~~~~~~~~~~~g~----g--~~-----~~~----~~l~e~~~~------Ga--~gik~~~~~~~t~e~l~~~l~~A~~~ 241 (569)
T 1e9y_B 185 AAEEYSMNLGFLAK----G--NA-----SND----ASLADQIEA------GA--IGFKIHEDWGTTPSAINHALDVADKY 241 (569)
T ss_dssp HHTTSSSEEEEEEE----C--CC-----SCH----HHHHHHHHT------TC--SEEEECGGGCCCHHHHHHHHHHHHHT
T ss_pred HhcccCceEEEECC----C--Cc-----CCH----HHHHHHHHc------CC--CEEEecCCCCCCHHHHHHHHHHHHHh
Confidence 66666777533211 1 10 011 223333331 22 24555666778999999999999999
Q ss_pred CCeeeEEecC
Q 022028 236 KTGIHMHVAE 245 (304)
Q Consensus 236 ~~~~~~H~~E 245 (304)
|+++.+|+.+
T Consensus 242 g~~V~iHa~~ 251 (569)
T 1e9y_B 242 DVQVAIHTDT 251 (569)
T ss_dssp TCEEEECCCT
T ss_pred CCEEEEEcCC
Confidence 9999999864
No 38
>2ogj_A Dihydroorotase; TIM barrel, binuclear zinc, imidazole complex, amido hydrola 9244B, structural genomics, PSI-2; HET: KCX; 2.62A {Agrobacterium tumefaciens}
Probab=99.78 E-value=7.3e-19 Score=159.71 Aligned_cols=216 Identities=18% Similarity=0.174 Sum_probs=123.9
Q ss_pred CCcccEEEEccEEEecCCCCceeeeeeEEEe-CCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhh
Q 022028 16 GSSSTMILHNAVIVTMDKESRVFRNGGVFVV-QDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLA 94 (304)
Q Consensus 16 ~~~~~~li~~~~ii~~~~~~~~~~~~~I~I~-~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~ 94 (304)
+|+.+++|+|++|++++.. ....+++|+|+ ||||++|++..+. +.+.++||++|++|+|||||+|+|+..+..
T Consensus 12 ~~~~~~li~n~~vv~~~~~-~~~~~~~v~I~~~g~I~~Ig~~~~~-----~~~~~viD~~g~~v~PGlID~H~H~~~~~~ 85 (417)
T 2ogj_A 12 PLQAPILLTNVKPVGFGKG-ASQSSTDILIGGDGKIAAVGSALQA-----PADTQRIDAKGAFISPGWVDLHVHIWHGGT 85 (417)
T ss_dssp --CCCEEEEEEEECSSCTT-CCCSCEEEEECTTSBEEEEETTCCC-----SSCEEECCC--CEEEECEEEEEECCCBTTB
T ss_pred cCCCcEEEECCEEEcCCCC-ccCccceEEEecCCEEEEeccCCCC-----CCCCeEEECCCCEEccCeeecccccccccc
Confidence 3455789999999986531 14568899999 9999999875321 124589999999999999999999965321
Q ss_pred hcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC---CHHHHHHHH-HHc--CCeEEeec
Q 022028 95 KGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---HVSEMAKAV-ELL--GLRACLVQ 168 (304)
Q Consensus 95 ~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~---~~~~~~~~~-~~~--gir~~~~~ 168 (304)
+ .| .+++ ..++++||||++|+... ..+.+.+.. +.. +++.++..
T Consensus 86 ~---------~~-----------~~~~----------~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 135 (417)
T 2ogj_A 86 D---------IS-----------IRPS----------ECGAERGVTTLVDAGSAGEANFHGFREYIIEPSRERIKAFLNL 135 (417)
T ss_dssp S---------SC-----------CCGG----------GTSGGGTEEEEEEESSCCSTTHHHHHHHTTTTCSSEEEEEEES
T ss_pred c---------cC-----------CCHH----------HHHHhCCcCeEEeCCcCCCcCHHHHHHHHhhccccCeEEEecc
Confidence 1 00 1111 13689999999986532 222333321 211 23444432
Q ss_pred ccccCCCCC---CCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecC
Q 022028 169 STMDCGEGL---PASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAE 245 (304)
Q Consensus 169 ~~~d~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E 245 (304)
... |... ..+.... .....+..+++++.+... ...+++.+.+.....++.+.++++.++|+++++++.+|+.+
T Consensus 136 ~~~--G~~~~~~~~e~~~~-~~~~~~~~~~~~~~~~~~-~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~ 211 (417)
T 2ogj_A 136 GSI--GLVACNRVPELRDI-KDIDLDRILECYAENSEH-IVGLKVRASHVITGSWGVTPVKLGKKIAKILKVPMMVHVGE 211 (417)
T ss_dssp STT--TTTTTTTSCSCSSG-GGCCHHHHHHHHHTCTTT-EEEEEEEESHHHHTTCTTHHHHHHHHHHHHHTCCEEEEECS
T ss_pred ccC--cCCCCCCcccccch-hhcCHHHHHHHHHhCCCc-eEEEEEEecCCccccccHHHHHHHHHHHHHcCCcEEEEcCC
Confidence 111 1100 0011000 000122344455543321 11255555654445678888888999999999999999977
Q ss_pred ChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCc
Q 022028 246 IPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH 287 (304)
Q Consensus 246 ~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~ 287 (304)
+....+... +++.++.++.||++..+
T Consensus 212 ~~~~~~~~~----------------~~l~~g~~~~H~~~~~~ 237 (417)
T 2ogj_A 212 PPALYDEVL----------------EILGPGDVVTHCFNGKS 237 (417)
T ss_dssp SSSCHHHHH----------------HHCCTTCEEETTTCCCT
T ss_pred CcccHHHHH----------------HHhcCCCEEEeccCCCc
Confidence 543222211 12333467889888544
No 39
>1gkr_A Hydantoinase, non-ATP dependent L-selective hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX; 2.60A {Arthrobacter aurescens} SCOP: b.92.1.3 c.1.9.6
Probab=99.77 E-value=1.5e-17 Score=152.72 Aligned_cols=178 Identities=16% Similarity=0.137 Sum_probs=113.2
Q ss_pred ccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhccc
Q 022028 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (304)
Q Consensus 19 ~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~ 98 (304)
.+++|+|++|++++ .. .+++|+|+||||++|++..+. +.+.++||++|++|+|||||+|+|+....
T Consensus 2 ~~~li~~~~v~~~~---~~-~~~~v~I~~g~I~~ig~~~~~-----~~~~~viD~~g~~v~PGlID~H~H~~~~~----- 67 (458)
T 1gkr_A 2 FDVIVKNCRLVSSD---GI-TEADILVKDGKVAAISADTSD-----VEASRTIDAGGKFVMPGVVDEHVHIIDMD----- 67 (458)
T ss_dssp EEEEEEEEEEEETT---EE-EEEEEEEETTEEEEEESCCTT-----CCEEEEEECTTCEEEECEEEEEEECCCGG-----
T ss_pred ceEEEECcEEECCC---Cc-eeeeEEEECCEEEEecCCCCC-----CCCCeEEeCCCCEEecCEEEeeecccCCC-----
Confidence 46889999999865 23 688999999999999875421 12457999999999999999999996421
Q ss_pred CCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCC-CCC-----H---HHHHHHHHHcCCeEEeecc
Q 022028 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-GQH-----V---SEMAKAVELLGLRACLVQS 169 (304)
Q Consensus 99 ~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~-~~~-----~---~~~~~~~~~~gir~~~~~~ 169 (304)
.+ .++++++. ....++++||||++++. ... . ....+.+...+++......
T Consensus 68 ---~~--------------~~~~~~~~----~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (458)
T 1gkr_A 68 ---LK--------------NRYGRFEL----DSESAAVGGITTIIEMPITFPPTTTLDAFLEKKKQAGQRLKVDFALYGG 126 (458)
T ss_dssp ---GT--------------TTSCCHHH----HHHHHHHHTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEEEEEEE
T ss_pred ---CC--------------CchhHHHH----HHHHHHcCCEEEEEeCCCCCCCCCCcHHHHHHHHHHhhhCceeEEEEec
Confidence 00 01122222 23456789999999976 221 1 2223333333332211100
Q ss_pred cccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCc---ccCCCHHHHHHHHHHHHHhCCeeeEEecCC
Q 022028 170 TMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQ---IMNATDRLLLETRDMAREFKTGIHMHVAEI 246 (304)
Q Consensus 170 ~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~ 246 (304)
. .+ .. +++.+++++. +...++++++++. .+.++++.++++++.|+++++++.+|+ |.
T Consensus 127 ~-------~~----~~----~~~~~~~~~~----g~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-~~ 186 (458)
T 1gkr_A 127 G-------VP----GN----LPEIRKMHDA----GAVGFKSMMAASVPGMFDAVSDGELFEIFQEIAACGSVIVVHA-EN 186 (458)
T ss_dssp C-------CT----TC----HHHHHHHHHT----TCCEEEEESSCSBTTTBCBCCHHHHHHHHHHHHHHTCEEEEEC-CC
T ss_pred c-------CC----CC----HHHHHHHHHc----CCcEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEC-CC
Confidence 0 00 01 2233444432 2345666666653 357899999999999999999999998 55
Q ss_pred hhhHH
Q 022028 247 PYENQ 251 (304)
Q Consensus 247 ~~~~~ 251 (304)
....+
T Consensus 187 ~~~~~ 191 (458)
T 1gkr_A 187 ETIIQ 191 (458)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 54443
No 40
>3dc8_A Dihydropyrimidinase; TIM-barrel, hydrolase; HET: KCX; 1.85A {Sinorhizobium meliloti}
Probab=99.77 E-value=1.4e-17 Score=154.02 Aligned_cols=182 Identities=15% Similarity=0.142 Sum_probs=116.1
Q ss_pred cEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccC
Q 022028 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (304)
Q Consensus 20 ~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~ 99 (304)
+++|+|++|++++. . .+++|+|+||||++|++..+ +.++||++|++|+|||||+|+|+.....
T Consensus 2 ~~~i~~~~v~~~~~---~-~~~~v~I~~G~I~~i~~~~~--------~~~viD~~g~~v~PG~ID~H~H~~~~~~----- 64 (490)
T 3dc8_A 2 STVIKGGTIVTADL---T-YKADVKVEGGRIVEIGPNLS--------GAETLDATGCYVMPGGIDPHTHLEMPFM----- 64 (490)
T ss_dssp CEEEESCEEECSSC---E-EECEEEEETTEEEEEESSCC--------CSEEEECTTCEEEECEEEEEECTTCEET-----
T ss_pred cEEEEccEEECCCC---c-eeeeEEEECCEEEEeccCCC--------CCeEEECCCCEEecCEEeeccccCCCCC-----
Confidence 47899999998652 2 57899999999999987542 4689999999999999999999965221
Q ss_pred CCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC----CHHHHHHHHHHcCCeEEeecccccCCC
Q 022028 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----HVSEMAKAVELLGLRACLVQSTMDCGE 175 (304)
Q Consensus 100 ~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~----~~~~~~~~~~~~gir~~~~~~~~d~g~ 175 (304)
. ..++++++..+ ..++.+||||++++... .....++.......+..+...+..
T Consensus 65 -----~-----------~~~~e~~~~~~----~aa~~~GvTtv~~~~~~~p~~~~~~~~~~~~~~a~~~~~d~~~~~--- 121 (490)
T 3dc8_A 65 -----G-----------TYSSDDFESGT----RAALAGGTTMVVDFALPSPGQSLLEALTMWDNKSTRANCDYSFHM--- 121 (490)
T ss_dssp -----T-----------EECSCCHHHHH----HHHHHTTEEEEEEEECCC-CCCHHHHHHHHHHHTTTCSSEEEEEE---
T ss_pred -----C-----------CCCHHHHHHHH----HHHHHcCEEeecccCCCCCCcCHHHHHHHHHHHhhcccceeeeEE---
Confidence 0 01233444333 34578999999986422 122333333222212111000000
Q ss_pred CCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhH
Q 022028 176 GLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (304)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~ 250 (304)
++. . ...+.+++..+++++ .+...++.++++.....++++.+.++++.|+++|.++.+| +|.....
T Consensus 122 ~~~-~----~~~~~l~el~~l~~~---~G~~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H-aE~~~~i 187 (490)
T 3dc8_A 122 AIT-W----WGEQVFNEMETIVKD---KGINTFKHFMAYKGALMVDDDEMFSSFQRCAALGALPLVH-AENGDVV 187 (490)
T ss_dssp ECC-S----CSHHHHHHHHHHHHH---SCCCEEEEESCSTTTTBCCHHHHHHHHHHHHHHTCEEEEE-CSCHHHH
T ss_pred EEe-c----CcHHHHHHHHHHHHh---CCCCEEEEEecCCCCccCCHHHHHHHHHHHHhcCCEEEEe-cCChHHH
Confidence 000 0 122334444454422 2334567777777777789999999999999999999999 6776544
No 41
>1rk6_A D-aminoacylase; TIM barrel, beta barrel, insertion, hydrolase; 1.43A {Alcaligenes faecalis} SCOP: b.92.1.6 b.92.1.6 c.1.9.11 PDB: 1rjp_A 1v51_A 1rjq_A 1rjr_A 1rk5_A 1v4y_A 1m7j_A
Probab=99.77 E-value=1.5e-18 Score=161.26 Aligned_cols=203 Identities=19% Similarity=0.176 Sum_probs=115.7
Q ss_pred ccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhccc
Q 022028 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (304)
Q Consensus 19 ~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~ 98 (304)
.+++|+|++|++++. ....+++|+|+||||++|++..+ ..+.++||++|++|+|||||+|+|+..+..++..
T Consensus 21 ~~~~i~~~~v~~~~~--~~~~~~~v~i~~g~I~~i~~~~~------~~~~~~iD~~g~~v~PG~iD~H~H~~~~~~~~~~ 92 (496)
T 1rk6_A 21 FDYILSGGTVIDGTN--APGRLADVGVRGDRIAAVGDLSA------SSARRRIDVAGKVVSPGFIDSHTHDDNYLLKHRD 92 (496)
T ss_dssp BSEEEESSEECCSSS--CCCEECEEEEETTEEEEEECCTT------SCBSCEEECTTCEEEECEEESSCCCTTHHHHCTT
T ss_pred ccEEEECCEEEeCCC--CceeccEEEEECCEEEEecCCCC------CCCCeEEeCCCCEEecCEeeeeecCCccccccHH
Confidence 368999999998653 34568899999999999987532 1245799999999999999999999876544311
Q ss_pred C-------------------CCCcc-ccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCC------------
Q 022028 99 D-------------------DVDLM-TWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG------------ 146 (304)
Q Consensus 99 ~-------------------~~~~~-~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~------------ 146 (304)
. ..++. +|+.+.+ +... .+++++..+.....++++.|.+++....
T Consensus 93 ~~~~~~~G~Tt~~~~~~g~~~~p~~~~~l~~~i-~~~~--~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~g~~~~~~~~~ 169 (496)
T 1rk6_A 93 MTPKISQGVTTVVTGNCGISLAPLAHANPPAPL-DLLD--EGGSFRFARFSDYLEALRAAPPAVNAACMVGHSTLRAAVM 169 (496)
T ss_dssp CHHHHTTTEEEEEESCTTCCSCSEECSSCCTTG-GGGC--SSSCCEESSHHHHHHHHHHSCCSSEEEEEEEHHHHHHHHC
T ss_pred HHHHHcCCeEEEEeCCCCCCCCCCChHHHHHhh-cccC--cccccCccCHHHHHHHHhccCCccceEEecccccceeeec
Confidence 0 11222 2544433 2111 1222233444555667777665542210
Q ss_pred ---C--CC---HH---HHHHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeC
Q 022028 147 ---G--QH---VS---EMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIR 215 (304)
Q Consensus 147 ---~--~~---~~---~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 215 (304)
. .. .. .+.+.+.+.|.+.+...... ++. .....++..+.. +...++ + ..+.+.+.
T Consensus 170 ~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~------~~~-~~~~~~el~~~~-~~a~~~-----g-~~v~~H~~ 235 (496)
T 1rk6_A 170 PDLRREATADEIQAMQALADDALASGAIGISTGAFY------PPA-AHASTEEIIEVC-RPLITH-----G-GVYATHMR 235 (496)
T ss_dssp SCCSSCCCHHHHHHHHHHHHHHHHHTCCEEEEETTS------GGG-TTCCHHHHHHHH-THHHHH-----T-CEEEEECS
T ss_pred cccccCCCHHHHHHHHHHHHHHHHcCCcEEeecccc------CCC-CCCCHHHHHHHH-HHHHHc-----C-CEEEEEeC
Confidence 0 01 11 22333335677664321111 010 011222332222 222222 1 22334443
Q ss_pred cccCCCHHHHHHHHHHHHHhCCeeeE-EecCC
Q 022028 216 QIMNATDRLLLETRDMAREFKTGIHM-HVAEI 246 (304)
Q Consensus 216 ~~~~~~~e~l~~~~~~a~~~~~~~~~-H~~E~ 246 (304)
....+..+.++++.++|++.|.++++ |+.+.
T Consensus 236 ~~~~~~~~~l~~~~~~a~~~g~~v~i~H~~~~ 267 (496)
T 1rk6_A 236 DEGEHIVQALEETFRIGRELDVPVVISHHKVM 267 (496)
T ss_dssp CSSTTHHHHHHHHHHHHHHHTSCEEECSCCCC
T ss_pred CCcccHHHHHHHHHHHHHHcCCeEEEEEEecc
Confidence 44566778888899999999999888 98775
No 42
>3sfw_A Dihydropyrimidinase; hydrolase, zinc binding; HET: KCX; 1.73A {Brevibacillus agri} PDB: 1yny_A 1k1d_A*
Probab=99.77 E-value=4.1e-18 Score=156.80 Aligned_cols=184 Identities=16% Similarity=0.218 Sum_probs=114.2
Q ss_pred cEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccC
Q 022028 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (304)
Q Consensus 20 ~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~ 99 (304)
.++|+|++|++.+ .. .+++|+|+||||++|++..+ +.+.++||++|++|+|||||+|+|+.....
T Consensus 2 ~~~i~n~~v~~~~---~~-~~~~v~i~~g~I~~i~~~~~------~~~~~viD~~g~~v~PG~ID~H~H~~~~~~----- 66 (461)
T 3sfw_A 2 KKWIRNGTVVTAS---DT-YQADVLIDGEKVVAIGSDLQ------ATDAEVIDATGYYLLPGGIDPHTHLDMPFG----- 66 (461)
T ss_dssp EEEEESCEEECSS---CE-EECEEEEETTEEEEEESCCC------CSSCEEEECTTCEEEECEEEEEECTTCEET-----
T ss_pred cEEEECeEEECCC---Cc-EEEEEEEECCEEEEEeCCCC------CCCCeEEECCCCEEEeeeEEeEeccCcCCC-----
Confidence 4789999999854 23 57899999999999998653 135789999999999999999999965210
Q ss_pred CCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC----CHHHHHHHH-HHcCCeEEeecccccCC
Q 022028 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----HVSEMAKAV-ELLGLRACLVQSTMDCG 174 (304)
Q Consensus 100 ~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~----~~~~~~~~~-~~~gir~~~~~~~~d~g 174 (304)
.+ ...++++. ....++.+||||++++... .....++.. ....-+......+. +
T Consensus 67 -----~~-----------~~~e~~~~----~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~--~ 124 (461)
T 3sfw_A 67 -----GT-----------VTSDNFFT----GTKAAAFGGTTSIVDFCLTSKGESLHSAIATWHEKARGKAVIDYGFH--L 124 (461)
T ss_dssp -----TE-----------ECSCCHHH----HHHHHHHTTEEEEEEEECCCTTSCHHHHHHHHHHHHTTTCSSEEEEE--E
T ss_pred -----Cc-----------ccHhHHHH----HHHHHHhCCEEEEEccCCCCCcchHHHHHHHHHHHhhcCcEEEEEEE--E
Confidence 00 11223332 2344689999999986431 122222221 11111110000000 0
Q ss_pred CCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhH
Q 022028 175 EGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (304)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~ 250 (304)
.+. ....+.+++.++++++ .+...++.++...+...++++.+.++++.|+++|+++.+| +|.....
T Consensus 125 -~~~-----~~~~~~~~~~~~l~~~---~G~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H-ae~~~~~ 190 (461)
T 3sfw_A 125 -MVS-----DANDHVLEELESVVNN---EGITSLKVFMAYKNVLMADDETLFKTLIRAKELGALVQVH-AENGDVL 190 (461)
T ss_dssp -ECS-----CCCHHHHHHHHHHHHT---SCCCEEEEESSSTTTTBCCHHHHHHHHHHHHHHTCEEEEE-CSCHHHH
T ss_pred -EEe-----CCCHHHHHHHHHHHHh---CCCCEEEEEEecCCCcccCHHHHHHHHHHHHhcCCEEEEE-cCCHHHH
Confidence 000 0123444555555542 2334566666665556789999999999999999999999 5665443
No 43
>3icj_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structur initiative; HET: KCX; 1.95A {Pyrococcus furiosus} PDB: 3etk_A* 3igh_X*
Probab=99.77 E-value=9.4e-18 Score=156.39 Aligned_cols=237 Identities=16% Similarity=0.183 Sum_probs=140.6
Q ss_pred cEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhc---
Q 022028 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG--- 96 (304)
Q Consensus 20 ~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g--- 96 (304)
+++|+|++|+++++. .....+|.|+||||++|++..+......+.+.++||++|++|+|||||+|+|+.......
T Consensus 37 ~~li~ng~I~t~~~~--~~~~~~v~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~G~~v~PGfiD~H~H~~~~g~~~~~~ 114 (534)
T 3icj_A 37 MKALINGTIYTSFSP--VKKVSGLVISNERVLYAGDSSTALRIAELAGGEIIDLKGKFVMPAFFDSHLHLDELGMSLEMV 114 (534)
T ss_dssp EEEEESSEEEEEETT--EEEESEEEEETTEEEEEECHHHHHHHHHHHTCEEEECTTCEEEECEEEEEECHHHHHHHHHSE
T ss_pred CEEEECCEEECCCCC--CceeeEEEEECCEEEEEcChHHHHhhccCCCCEEEECCCCEEecCEeehhhhhhhhhhhcCcc
Confidence 378999999998753 224679999999999999876532211012568999999999999999999986533210
Q ss_pred -ccCCCCccc-----------cccccccCc--------------------------------------------------
Q 022028 97 -IADDVDLMT-----------WLHDRIWPY-------------------------------------------------- 114 (304)
Q Consensus 97 -~~~~~~~~~-----------~l~~~~~~~-------------------------------------------------- 114 (304)
+....++.+ |+....|..
T Consensus 115 dl~~~~s~~e~~~~l~~~~~~wi~g~G~~~~~~~~~pt~~~LD~~~~Pv~l~~~~~H~~~~Ns~AL~~~gi~~t~~p~G~ 194 (534)
T 3icj_A 115 DLRGVKSMEELVERVKKGRGRIIFGFGWDQDELGRWPTREDLDVIDRPVFLYRRCFHVAVMNSKMIDLLNLKPSKDFDES 194 (534)
T ss_dssp ECTTCCSHHHHHHHHHTCCSSSEEEEEECHHHHSSCCCHHHHTTSSSCEEEEETTSSEEEECHHHHHHHCCCCCTTEETT
T ss_pred CCCCCCCHHHHHHHHHHHHhhCEEEcccCHHHhcCCCCHHHHhhCCCeEEEEecCCcHhHHhHHHHHHcCCCCCCCCCCC
Confidence 000000000 111100000
Q ss_pred ---------------cCC-C-ChHHHHHHHHHHHHHHHhcCcceeecCCCC--CHHHHHHHHH--HcCCeEEeecccccC
Q 022028 115 ---------------ESN-M-TEEDSYISTLLCGIELIHSGVTCFAEAGGQ--HVSEMAKAVE--LLGLRACLVQSTMDC 173 (304)
Q Consensus 115 ---------------~~~-~-~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~--~~~~~~~~~~--~~gir~~~~~~~~d~ 173 (304)
... . ++++.....+.+..++++.|+|++.|.... ..+...+..+ ++.+|.+.....
T Consensus 195 tG~l~e~A~~~v~~~~p~~~l~~~~~~~~l~~a~~~~~~~GiTsv~d~~~~~~~~~~~~~l~~~g~l~~rv~~~~~~--- 271 (534)
T 3icj_A 195 TGIVRERALEESRKIINEKILTVKDYKHYIESAQEHLLSLGVHSVGFMSVGEKALKALFELEREGRLKMNVFAYLSP--- 271 (534)
T ss_dssp TTEEEHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTTEEEEEEEEECHHHHHHHHHHHHTTCCCSEEEEEECG---
T ss_pred CceeeHHHHHHHHHhccccCCCHHHHHHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHHHHhCCCCcEEEEEecCH---
Confidence 000 2 566667777788899999999999987522 1112222222 245666432110
Q ss_pred CCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeE-----EEEe-------------------eCcccCCCHHHHHHHH
Q 022028 174 GEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIR-----IWFG-------------------IRQIMNATDRLLLETR 229 (304)
Q Consensus 174 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-----~~~~-------------------~~~~~~~~~e~l~~~~ 229 (304)
+.++...+... ...++++++ ++.. ..+...++++.+++++
T Consensus 272 --------------~~~~~~~~~~~--~~~~~~~~~~~gvK~~~DG~~~~~tA~l~~pY~d~~~~~g~~~~~~e~l~~~v 335 (534)
T 3icj_A 272 --------------ELLDKLEELNL--GKFEGRRLRIWGVKLFVDGSLGARTALLSEPYTDNPTTSGELVMNKDEIVEVI 335 (534)
T ss_dssp --------------GGHHHHHHHTC--CSEECSSEEEEEEEEESCCCTTTTCSCCSSCBTTBTTCCCCCSSCHHHHHHHH
T ss_pred --------------HHHHHHHHhcc--ccCCCCcEEEEeEEEEEeCCCCccchhhcCCccCCCCCCCcccCCHHHHHHHH
Confidence 00111111100 011122322 2211 0123457999999999
Q ss_pred HHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc
Q 022028 230 DMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN 291 (304)
Q Consensus 230 ~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~ 291 (304)
+.|+++|.++++|+.+. ...+. .++.+.+.+ .+..+.||.++++++++
T Consensus 336 ~~A~~~G~~v~~Ha~gd-~ai~~----------~l~a~~~~~---~r~~ieH~~~~~~e~i~ 383 (534)
T 3icj_A 336 ERAKPLGLDVAVHAIGD-KAVDV----------ALDAFEEAE---FSGRIEHASLVRDDQLE 383 (534)
T ss_dssp HHHTTTTCEEEEEECSH-HHHHH----------HHHHHHHHT---CCCEEEECCBCCHHHHH
T ss_pred HHHHHCCCEEEEEEcCh-HHHHH----------HHHHHHhcc---CCCEEEECCCCCHHHHH
Confidence 99999999999998743 33433 334444444 68899999999999998
No 44
>1xrt_A Dihydroorotase, dhoase; amidohydrolase, metalloenzyme, pyrimidine; 1.61A {Aquifex aeolicus} SCOP: b.92.1.3 c.1.9.6 PDB: 1xrf_A 3d6n_A*
Probab=99.76 E-value=4.8e-18 Score=156.59 Aligned_cols=174 Identities=18% Similarity=0.211 Sum_probs=114.5
Q ss_pred cEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccC
Q 022028 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (304)
Q Consensus 20 ~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~ 99 (304)
+++|+|++|++.+ ..++.+++|+|+||||++|++..+ + .+.++||++|++|+|||||+|+|+.....
T Consensus 48 ~~~i~~~~v~~~~--~~~~~~~~v~i~~g~I~~i~~~~~-----~-~~~~~iD~~g~~v~PGlID~H~H~~~~~~----- 114 (467)
T 1xrt_A 48 KLIVKNGYVIDPS--QNLEGEFDILVENGKIKKIDKNIL-----V-PEAEIIDAKGLIVCPGFIDIHVHLRDPGQ----- 114 (467)
T ss_dssp EEEEESCEEEEGG--GTEEEECEEEEETTEEEEEESSCC-----C-SSEEEEECTTSEEEECEEEEEECCCTTTC-----
T ss_pred eEEEEeeEEECCC--CCceecceEEEECCEEEEecCCCC-----C-CCCcEEeCCCCEEccCEEEEeecccCCCC-----
Confidence 4789999999865 235678999999999999987532 1 24589999999999999999999964210
Q ss_pred CCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC--------CHHHHHHHHHHcC-CeEEeeccc
Q 022028 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------HVSEMAKAVELLG-LRACLVQST 170 (304)
Q Consensus 100 ~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~--------~~~~~~~~~~~~g-ir~~~~~~~ 170 (304)
.| .++++. ....++++||||++++... ..+...+.++..| +|.+....+
T Consensus 115 -----~~-------------~~~~~~----~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~ 172 (467)
T 1xrt_A 115 -----TY-------------KEDIES----GSRCAVAGGFTTIVCMPNTNPPIDNTTVVNYILQKSKSVGLCRVLPTGTI 172 (467)
T ss_dssp -----TT-------------TCCHHH----HHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEEEECBCS
T ss_pred -----Cc-------------hhhHHH----HHHHHHhCCeEEEEecCCCCCCCChHHHHHHHHHHhcccCcceEEEEeee
Confidence 11 112222 2345789999999997632 1244566667777 776443221
Q ss_pred ccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCCh
Q 022028 171 MDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIP 247 (304)
Q Consensus 171 ~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~ 247 (304)
.. + .... .. ++.+++++. +. ..+.+++...++++.+++++++|+++|+++.+|+.+..
T Consensus 173 ~~-~--~~~~----~~----~~~~~l~~~------g~--~~i~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~ 230 (467)
T 1xrt_A 173 TK-G--RKGK----EI----ADFYSLKEA------GC--VAFTDDGSPVMDSSVMRKALELASQLGVPIMDHCEDDK 230 (467)
T ss_dssp BG-G--GCSS----SB----CCHHHHHHH------TC--CCBCCTTSCCCCHHHHHHHHHHHHHHTCEEEECCCGGG
T ss_pred cC-C--CCcc----cH----HHHHHHHHc------CC--EEEEcCCCCCCCHHHHHHHHHHHHhcCCEEEEECCCHH
Confidence 11 1 0001 11 112233321 11 12344555678999999999999999999999997754
No 45
>2ics_A Adenine deaminase; TIM barrel, binuclear zinc, adenine complex, amidohydrolase, structural genomics, PSI, protein structure initiative; HET: KCX ADE; 2.30A {Enterococcus faecalis} SCOP: b.92.1.8 c.1.9.14
Probab=99.74 E-value=5.5e-18 Score=151.74 Aligned_cols=185 Identities=15% Similarity=0.152 Sum_probs=114.2
Q ss_pred ccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCC-CEeeccccccCccchhhhhhcc
Q 022028 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQS-QILLPGFVNTHVHTSQQLAKGI 97 (304)
Q Consensus 19 ~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g-~iv~PG~ID~H~Hl~~s~~~g~ 97 (304)
.+++|+|++|++.+ +++|+|+||||++|++..+ ..+.++||++| ++|+|||||+|+|+.....
T Consensus 5 ~~~~i~~~~v~~~~-------~~~v~i~~g~I~~ig~~~~------~~~~~~iD~~g~~~v~PG~ID~H~H~~~~~~--- 68 (379)
T 2ics_A 5 YDLLIKNGQTVNGM-------PVEIAIKEKKIAAVAATIS------GSAKETIHLEPGTYVSAGWIDDHVHCFEKMA--- 68 (379)
T ss_dssp EEEEEEEEECTTSC-------EEEEEEETTEEEEEESCCC------CCEEEEEECCTTCEEEECEEEEEECCCTTSS---
T ss_pred ccEEEECCEEEcCC-------cceEEEECCEEEEecCCCC------CCCCcEEeCCCCEEEccCEEEeccccCccCc---
Confidence 35789999999731 6799999999999987532 12457999999 9999999999999965310
Q ss_pred cCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC---CCHHHHHHHHHHcCC--eEEeeccccc
Q 022028 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG---QHVSEMAKAVELLGL--RACLVQSTMD 172 (304)
Q Consensus 98 ~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~---~~~~~~~~~~~~~gi--r~~~~~~~~d 172 (304)
. .| . +. ..+++++||||+++++. ...+.+.+.+++.+. +.++.....
T Consensus 69 ----~--~~------~-----~~----------~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~- 120 (379)
T 2ics_A 69 ----L--YY------D-----YP----------DEIGVKKGVTTVIDAGTTGAENIHEFYDLAQQAKTNVFGLVNISKW- 120 (379)
T ss_dssp ----S--SC------C-----CH----------HHHTGGGTEEEEEEESSSCTTTHHHHHHHHHTSSSEEEEEEESSTT-
T ss_pred ----c--cc------C-----ch----------hhhHhhCceeEEEcCCCCCccCHHHHHHHHHhhcccEEEEcccccc-
Confidence 0 01 0 11 13578999999998642 234556677677664 333332221
Q ss_pred CCCCCCC-CcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHH-hCCeeeEEecCChhhH
Q 022028 173 CGEGLPA-SWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMARE-FKTGIHMHVAEIPYEN 250 (304)
Q Consensus 173 ~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~-~~~~~~~H~~E~~~~~ 250 (304)
|. .+. .... ......+..+++++.+.. +...++....+.....++.+.++++.++|++ +++++.+|+.++....
T Consensus 121 -G~-~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~a~~~~g~~v~~H~~~~~~~~ 196 (379)
T 2ics_A 121 -GI-VAQDELAD-LSKVQASLVKKAIQELPD-FVVGIKARMSRTVIGDNGITPLELAKQIQQENQEIPLMVHIGSAPPHL 196 (379)
T ss_dssp -TT-SSSCTTSS-GGGCCHHHHHHHHHHCTT-TEEEEEEEESHHHHTTCTTHHHHHHHHHHHTTTTCCEEEEECSSSSCH
T ss_pred -CC-CCHHHHHH-HHHHHHHHHHHHHHhhhC-cceEEEEeccccccccchHHHHHHHHHHHHHhcCCeEEEeCCCCcchH
Confidence 11 111 1110 011112334444544321 1112344444333345778888899999999 9999999998765433
Q ss_pred H
Q 022028 251 Q 251 (304)
Q Consensus 251 ~ 251 (304)
+
T Consensus 197 ~ 197 (379)
T 2ics_A 197 D 197 (379)
T ss_dssp H
T ss_pred H
Confidence 3
No 46
>3gri_A Dihydroorotase, dhoase; hydrolase, IDP00795, metal-binding, pyrimidine biosynthesis, structural genomics; 2.00A {Staphylococcus aureus subsp}
Probab=99.74 E-value=2e-17 Score=150.65 Aligned_cols=172 Identities=16% Similarity=0.196 Sum_probs=113.2
Q ss_pred EEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCC
Q 022028 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (304)
Q Consensus 21 ~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~ 100 (304)
++|+|++|++ . ....+++|+|+||||++|++..++ +.+.++||++|++|+|||||+|+|+.....
T Consensus 2 ~~i~~~~v~~-~---~~~~~~~v~i~~g~I~~i~~~~~~-----~~~~~~id~~g~~v~PG~iD~H~H~~~~g~------ 66 (424)
T 3gri_A 2 KLIKNGKVLQ-N---GELQQADILIDGKVIKQIAPAIEP-----SNGVDIIDAKGHFVSPGFVDVHVHLREPGG------ 66 (424)
T ss_dssp EEEESCEEEE-T---TEEEECEEEEETTEEEEEESCCCC-----CSSCEEEECTTCEEEECEEEEEECCCTTTC------
T ss_pred EEEEeeEEEc-C---CCceeeeEEEECCEEEEecCCCCC-----CCCCeEEECCCCEEEeCeEEeeecCCCCCC------
Confidence 6899999998 3 356789999999999999986542 235789999999999999999999864210
Q ss_pred CCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC--------CHHHHHHHHHHcCCeEEeeccccc
Q 022028 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------HVSEMAKAVELLGLRACLVQSTMD 172 (304)
Q Consensus 101 ~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~--------~~~~~~~~~~~~gir~~~~~~~~d 172 (304)
...++++. ....++++|||+++++... ..+...+.++..+.+.+.....+.
T Consensus 67 -----------------~~~~~~~~----~~~~~~~~G~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (424)
T 3gri_A 67 -----------------EYKETIET----GTKAAARGGFTTVCPMPNTRPVPDSVEHFEALQKLIDDNAQVRVLPYASIT 125 (424)
T ss_dssp -----------------TTTCCHHH----HHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEECCCEESB
T ss_pred -----------------CCHHHHHH----HHHHHHhCCEEEEeECcCCCCCCChHHHHHHHHHHhccCCCceEEEEEEEe
Confidence 01122222 2334688999999987631 133455666777775443222221
Q ss_pred CCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCC
Q 022028 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEI 246 (304)
Q Consensus 173 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~ 246 (304)
.+. .... +.+..++.+ . |.+ .+++.+.+.++++.++++++.|+++|+++++|+.+.
T Consensus 126 ~~~--~~~~--------l~~l~~l~~----~--G~~--~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~ 181 (424)
T 3gri_A 126 TRQ--LGKE--------LVDFPALVK----E--GAF--AFTDDGVGVQTASMMYEGMIEAAKVNKAIVAHCEDN 181 (424)
T ss_dssp GGG--CSSS--------BCCHHHHHT----T--TCC--CEEECSSCCCSHHHHHHHHHHHHHHTCCEEECCCCG
T ss_pred cCC--Ccch--------HHHHHHHHh----c--CcE--EEecCCcCcCCHHHHHHHHHHHHhcCCEEEEeCCCH
Confidence 110 0010 011222221 1 222 245667778899999999999999999999997543
No 47
>2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus}
Probab=99.74 E-value=8.3e-17 Score=146.33 Aligned_cols=169 Identities=17% Similarity=0.208 Sum_probs=113.4
Q ss_pred EEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCC
Q 022028 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (304)
Q Consensus 21 ~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~ 100 (304)
++|+|++|++++ ..+.+++|+|+||||++|++. + +.++||++|++|+|||||+|+|+....
T Consensus 2 ~~i~~~~v~~~~---~~~~~~~v~i~~g~I~~i~~~-~--------~~~~id~~g~~v~PG~iD~H~H~~~~~------- 62 (426)
T 2z00_A 2 ILIRNVRLVDAR---GERGPADVLIGEGRILSLEGG-E--------AKQVVDGTGCFLAPGFLDLHAHLREPG------- 62 (426)
T ss_dssp EEEEEEEEEETT---EEEEEEEEEEETTEEEESBCC-C--------CSEEEECTTCEEEECEEEEEECCCTTT-------
T ss_pred EEEEeeEEECCC---CceecceEEEECCEEEEEecC-C--------CceEEeCCCCEEecCEEEeccccCCCC-------
Confidence 689999999854 356789999999999999864 1 357999999999999999999996521
Q ss_pred CCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC--------CHHHHHHHHHHcC-CeEEeecccc
Q 022028 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------HVSEMAKAVELLG-LRACLVQSTM 171 (304)
Q Consensus 101 ~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~--------~~~~~~~~~~~~g-ir~~~~~~~~ 171 (304)
..| .++++ .....++++||||++++... ..+...+++++.+ +|.+....+
T Consensus 63 ---~~~-------------~~~~~----~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 121 (426)
T 2z00_A 63 ---EEV-------------KEDLF----SGLLAAVRGGYTDLVSMPNTKPPVDTPEAVRALKEKAKALGLARLHPAAAL- 121 (426)
T ss_dssp ---CTT-------------TCCHH----HHHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHTSSEECCEECS-
T ss_pred ---CCc-------------hHHHH----HHHHHHHhCCccEEEecCCCCCCcChHHHHHHHHHHhcccCcccEEEEEEe-
Confidence 011 11222 23356789999999987632 1345566667777 776332211
Q ss_pred cCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCCh
Q 022028 172 DCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIP 247 (304)
Q Consensus 172 d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~ 247 (304)
..+ ..... +++.+++++. +. ..++++..+.++++.++++++.|+++|+++.+|+.+..
T Consensus 122 ~~~--~~~~~--------~~~~~~l~~~------g~--~~i~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~ 179 (426)
T 2z00_A 122 TEK--QEGKT--------LTPAGLLREA------GA--VLLTDDGRTNEDAGVLAAGLLMAAPLGLPVAVHAEDAG 179 (426)
T ss_dssp BGG--GCSSS--------BCCHHHHHHH------TC--CEEECTTSCCCCHHHHHHHHHHHGGGTCCEEECCCCHH
T ss_pred ecC--CChhh--------HHHHHHHHHc------CC--EEEECCCcCCCCHHHHHHHHHHHHhhCCEEEEeCCCHH
Confidence 100 01111 1112233331 22 23455666678999999999999999999999987654
No 48
>3mpg_A Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus anthracis}
Probab=99.74 E-value=1e-16 Score=146.15 Aligned_cols=173 Identities=13% Similarity=0.208 Sum_probs=113.6
Q ss_pred cEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccC
Q 022028 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (304)
Q Consensus 20 ~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~ 99 (304)
+++|+|++|++.. ....+++|+|+||||++|++..+ +.+.++||++|++|+|||||+|+|+.....
T Consensus 2 ~~~i~~~~v~~~~---~~~~~~~v~i~~g~I~~i~~~~~------~~~~~~id~~g~~v~PG~iD~H~H~~~~~~----- 67 (428)
T 3mpg_A 2 NYLFKNGRYMNEE---GKIVATDLLVQDGKIAKVAENIT------ADNAEVIDVNGKLIAPGLVDVHVHLREPGG----- 67 (428)
T ss_dssp EEEEEEEEEECSS---SCEEEEEEEEESSBEEECCSSCC------CTTSEEEECTTCEEEECEEEEEECCCTTTC-----
T ss_pred cEEEEeeEEEeCC---CCeeeeeEEEECCEEEEecCCCC------CCCCeEEECCCCEEeeCEEEEeeccCCCCC-----
Confidence 4789999999733 35678999999999999998653 135789999999999999999999854210
Q ss_pred CCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC-----C---HHHHHHHHHHcCCeEEeecccc
Q 022028 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-----H---VSEMAKAVELLGLRACLVQSTM 171 (304)
Q Consensus 100 ~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~-----~---~~~~~~~~~~~gir~~~~~~~~ 171 (304)
...++++. ....++++|||+++++... . .+...+.++..+.+.+.....+
T Consensus 68 ------------------~~~~~~~~----~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (428)
T 3mpg_A 68 ------------------EHKETIET----GTLAAAKGGFTTICAMPNTRPVPDCREHMEDLQNRIKEKAHVNVLPYGAI 125 (428)
T ss_dssp ------------------TTTCCHHH----HHHHHHHHTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEEEECEES
T ss_pred ------------------CchhHHHH----HHHHHHhCCeEEEEeCCCCCCCCCcHHHHHHHHHHhcccCCcEEEEEeeE
Confidence 01122222 2344688999999986421 1 3345556666676654433222
Q ss_pred cCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCC
Q 022028 172 DCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEI 246 (304)
Q Consensus 172 d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~ 246 (304)
..+. .... +.+..++.+. |.+ .+++.+.+.++++.++++++.|+++|+++.+|+.+.
T Consensus 126 ~~~~--~~~~--------l~~~~~l~~~------G~~--~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~vH~~~~ 182 (428)
T 3mpg_A 126 TVRQ--AGSE--------MTDFETLKEL------GAF--AFTDDGVGVQDASMMLAAMKRAAKLNMAVVAHCEEN 182 (428)
T ss_dssp BGGG--CSSS--------BCCHHHHHHT------TCC--CEECTTSCCCCHHHHHHHHHHHHHTTCCEEECCCCG
T ss_pred ecCC--Ccch--------HHHHHHHHHh------CCE--EEECCCcCCCCHHHHHHHHHHHHhcCCeEEEECCCh
Confidence 2110 0000 0112223322 222 235666677899999999999999999999998654
No 49
>3gip_A N-acyl-D-glutamate deacylase; amidohydrolase family, hydrolase; 1.50A {Bordetella bronchiseptica} PDB: 3giq_A*
Probab=99.74 E-value=1.1e-16 Score=147.95 Aligned_cols=183 Identities=15% Similarity=0.099 Sum_probs=111.6
Q ss_pred CcccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhc
Q 022028 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (304)
Q Consensus 17 ~~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g 96 (304)
|+.+++|+|++|++++. ....+++|+|+||||++|++..+ ..+.++||++|++|+|||||+|+|+..+.++.
T Consensus 5 ~~~~~~i~~~~v~~~~~--~~~~~~~v~i~~g~I~~i~~~~~------~~~~~~id~~g~~v~PG~iD~H~H~~~~~~~~ 76 (480)
T 3gip_A 5 EKLDFKITGGWIIDGTG--APRRRADLGVRDGRIAAIGELGA------HPARHAWDASGKIVAPGFIDVHGHDDLMFVEK 76 (480)
T ss_dssp CCEEEEEESSEECCSSS--CCCEECEEEEETTEEEEEECCTT------SCEEEEEECTTSEEEECEEESSCCCTTHHHHS
T ss_pred ccCCEEEECcEEECCCC--CeeeeeEEEEECCEEEEecCCCC------CCCCeEEECCCCEEccCEEeccccccccccCC
Confidence 44578999999998653 34568899999999999998643 23568999999999999999999997654332
Q ss_pred ccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecC---------CC-----------------CCH
Q 022028 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEA---------GG-----------------QHV 150 (304)
Q Consensus 97 ~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~---------~~-----------------~~~ 150 (304)
.. ....+.+|+||+++. .. ...
T Consensus 77 ~~--------------------------------~~~~~~~G~Tt~~~g~cG~~~~p~~~~~~~~~~~~l~~~~~~~~~~ 124 (480)
T 3gip_A 77 PD--------------------------------LRWKTSQGITTVVVGNCGVSAAPAPLPGNTAAALALLGETPLFADV 124 (480)
T ss_dssp TT--------------------------------CHHHHTTTEEEEEECCTTCCSCSCCCTTCCCGGGGGTCSSCCCSSH
T ss_pred hh--------------------------------HHHHhcCCeeEEEecCCCcCCCCCCcccchhhhhhhhccCccccCH
Confidence 00 012388999999872 10 113
Q ss_pred HHHHHHHHHcC--CeEEeecccc-----cCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHH
Q 022028 151 SEMAKAVELLG--LRACLVQSTM-----DCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDR 223 (304)
Q Consensus 151 ~~~~~~~~~~g--ir~~~~~~~~-----d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e 223 (304)
....+.....+ +......... -.|. . . .....+.+++..+++++....+.-.++..+.+......+.+
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~g~~~~r~~~~g~-~---~-~~~~~~~l~~m~~l~~~~~~~Ga~g~~~~~~y~p~~~~~~~ 199 (480)
T 3gip_A 125 PAYFAALDAQRPMINVAALVGHANLRLAAMRD-P---Q-AAPTAAEQQAMQDMLQAALEAGAVGFSTGLAYQPGAVAQAA 199 (480)
T ss_dssp HHHHHHHHHSCCSSEEEEEEEHHHHHHHHCSS-T---T-SCCCHHHHHHHHHHHHHHHHHTCCEEEEETTSTTGGGCCHH
T ss_pred HHHHHHHHhCCCCceEEEccccHHHHHHhcCC-c---C-CCCCHHHHHHHHHHHHHHHHCCCcEEeecCccCCcccCCHH
Confidence 34444544433 3222110000 0010 0 0 11123444555555554333322234433333222335777
Q ss_pred HHHHHHHHHHHhCCeeeEEec
Q 022028 224 LLLETRDMAREFKTGIHMHVA 244 (304)
Q Consensus 224 ~l~~~~~~a~~~~~~~~~H~~ 244 (304)
.+.++.+.++++|..+.+|+-
T Consensus 200 el~~~~~~a~~~g~~v~~H~~ 220 (480)
T 3gip_A 200 ELEGLARVAAERRRLHTSHIR 220 (480)
T ss_dssp HHHHHHHHHHHTTCEEEEECS
T ss_pred HHHHHHHHHHHcCCEEEEEec
Confidence 777888999999999999984
No 50
>3e74_A Allantoinase; (beta/alpha)8-barrel domain, small beta-sheet domain, hydrolase, metal-binding, purine metabolism, zinc; HET: KCX; 2.10A {Escherichia coli}
Probab=99.73 E-value=4.3e-17 Score=150.34 Aligned_cols=176 Identities=18% Similarity=0.222 Sum_probs=103.7
Q ss_pred CcccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhc
Q 022028 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (304)
Q Consensus 17 ~~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g 96 (304)
|+.+++|+|++|++++. ..+++|+|+||||++|++..+. ..++||++|++|+|||||+|+|+.....
T Consensus 21 m~~~~~i~~~~v~~~~~----~~~~~v~i~~g~I~~i~~~~~~-------~~~~id~~g~~v~PG~iD~H~H~~~~g~-- 87 (473)
T 3e74_A 21 MSFDLIIKNGTVILENE----ARVVDIAVKGGKIAAIGQDLGD-------AKEVMDASGLVVSPGMVDAHTHISEPGR-- 87 (473)
T ss_dssp -CEEEEEESCEEECSSC----EEECEEEEETTEEEEEESCCCC-------EEEEEECTTCEEEECEEEEEECC-------
T ss_pred CcCCEEEEeeEEECCCC----ceeeeEEEECCEEEEEcCCCCC-------CCcEEECCCCEEecCEEEEecccCCCCC--
Confidence 44568999999998652 4588999999999999986531 3689999999999999999999965211
Q ss_pred ccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCC-CC-----CHHHHHHHHHHcCCeEEeeccc
Q 022028 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-GQ-----HVSEMAKAVELLGLRACLVQST 170 (304)
Q Consensus 97 ~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~-~~-----~~~~~~~~~~~~gir~~~~~~~ 170 (304)
...++++ .....++.+||||++++. .. ..+.+........-+..+...+
T Consensus 88 ---------------------~~~~~~~----~~~~~~~~~G~Tt~~~~~~~t~p~~~~~~~~~~~~~~a~~~~~~d~~~ 142 (473)
T 3e74_A 88 ---------------------SHWEGYE----TGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQ 142 (473)
T ss_dssp -------------------------CHH----HHHHHHHHTTEEEEEECCSSSSSCSCSHHHHHHHHHHHTTTCSSEEEE
T ss_pred ---------------------CcHHHHH----HHHHHHHhCCEEEEEcCcccCCCCcccHHHHHHHHHHhccCCeEEEEE
Confidence 0012222 233456899999999986 21 1222222222111111000000
Q ss_pred ccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEe-------eCcccCCCHHHHHHHHHHHHHhCCeeeEEe
Q 022028 171 MDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFG-------IRQIMNATDRLLLETRDMAREFKTGIHMHV 243 (304)
Q Consensus 171 ~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-------~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~ 243 (304)
. + +..+.. +++..++.+. +...+|.++. ++..+.++++.++++++.|+++|.++.+|+
T Consensus 143 ~--~-~~~~~~--------~~~l~~l~~~----G~~~~K~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~ 207 (473)
T 3e74_A 143 L--G-GLVSYN--------IDRLHELDEV----GVVGFKCFVATCGDRGIDNDFRDVNDWQFFKGAQKLGELGQPVLVHC 207 (473)
T ss_dssp C--E-ECCTTC--------TTTHHHHHHH----TCSCEEEEC------------CCCCHHHHHHHHHHHHHHTCCEEEEC
T ss_pred E--e-ecccch--------HHHHHHHHHc----CCCEEEEeccccCCcccccccCCCCHHHHHHHHHHHHhcCCeEEEEe
Confidence 0 0 000110 1222333332 2234665554 234567789999999999999999999997
Q ss_pred cC
Q 022028 244 AE 245 (304)
Q Consensus 244 ~E 245 (304)
.+
T Consensus 208 e~ 209 (473)
T 3e74_A 208 EN 209 (473)
T ss_dssp SC
T ss_pred cC
Confidence 54
No 51
>1o12_A N-acetylglucosamine-6-phosphate deacetylase; structural genomics, TM0814, JCSG, PSI, protein structure initiative; 2.50A {Thermotoga maritima} SCOP: b.92.1.5 c.1.9.10
Probab=99.71 E-value=8.1e-19 Score=157.35 Aligned_cols=194 Identities=14% Similarity=0.106 Sum_probs=113.8
Q ss_pred eeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCCCCccccccccccCccCCC
Q 022028 39 RNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNM 118 (304)
Q Consensus 39 ~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~ 118 (304)
.+++|+|+||||++|++ + + || +|++|+|||||+|+|+..+.. +.+ .
T Consensus 28 ~~~~V~I~~g~I~~vg~-----------~-~-iD-~g~~v~PGlID~H~H~~~~~~--------~~~------------~ 73 (376)
T 1o12_A 28 FTGDVEIEEGKIVKVEK-----------R-E-CI-PRGVLMPGFVDPHIHGVVGAD--------TMN------------C 73 (376)
T ss_dssp EEEEEEEETTEEEEEEE-----------C-C-SC-CSSEEEECEEEEEECEETTEE--------TTT------------T
T ss_pred cCceEEEECCEEEEeCC-----------C-c-cC-CCCEEccCeEEEeecCCCCCC--------CCh------------h
Confidence 68899999999999974 1 4 89 999999999999999965321 000 0
Q ss_pred ChHHHHHHHHHHHHHHHhcCcceeecCCCCC--------HHHHHHHHHH-cC--CeEEeecccccCCCCCCCCcccCChH
Q 022028 119 TEEDSYISTLLCGIELIHSGVTCFAEAGGQH--------VSEMAKAVEL-LG--LRACLVQSTMDCGEGLPASWAVRTTD 187 (304)
Q Consensus 119 ~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~--------~~~~~~~~~~-~g--ir~~~~~~~~d~g~~~~~~~~~~~~~ 187 (304)
+ ....+.+++++||||++++.... .+...+++++ .| ++.+... |+.+.+........
T Consensus 74 ~-------l~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~g~~~~-----g~~~~~~~~g~~~~ 141 (376)
T 1o12_A 74 D-------FSEMEEFLYSQGVTTFLATTVSTSLEKMKEILRKARDYILENPSTSLLGVHLE-----GPYISKEKKGAHSE 141 (376)
T ss_dssp C-------HHHHHHHHHTTTEEEEEEECCSCCHHHHHHHHHHHHHHHHHCTTCSEEEEEEE-----CSSSCGGGCTTSCT
T ss_pred h-------HHHHHHHHHhCCcEEEEeccCCCCHHHHHHHHHHHHHHhhccCCCceEEEEEE-----cCcCCcccCCCCCH
Confidence 1 11246778999999999976321 1233445555 46 4433221 11111111110111
Q ss_pred HHHHHH-HHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeE-EecCChhhHHHHHHh--------c
Q 022028 188 DCIQSQ-KELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHM-HVAEIPYENQVVMDT--------R 257 (304)
Q Consensus 188 ~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~-H~~E~~~~~~~~~~~--------~ 257 (304)
+.++.. .+.++++. +....+.++|..+.. ++.++|+++|+++++ |+.|+.++.+.+++. |
T Consensus 142 ~~~~~~~~~~~~~~~---~~~~~~~~~pe~~~~-------~~i~~A~~~g~~v~igH~~~~~~~i~~a~~~G~~~itH~~ 211 (376)
T 1o12_A 142 KHIRPPSERELSEID---SPAKMLTFAPEIESS-------ELLLRLVKRDIVLSAGHSIATFEEFMKFYKEGVKRITHFP 211 (376)
T ss_dssp TTCCCCCHHHHTTCC---TTEEEEEECTTSTTG-------GGGGGGGGGTCEEEECSBCCCHHHHHHHHTTTCCEESSTT
T ss_pred HHhcCCCHHHHHHhh---CCeEEEEEccCCccH-------HHHHHHHHCCCEEEeecCccCHHHHHHHHHCCCCeEEecc
Confidence 111111 34444441 222334555543322 467889999999999 999998877777664 2
Q ss_pred -CCCCCHHHHHHHhCCCC-----CCe---eEEEeccCCcchhc
Q 022028 258 -KVDHGTVTFLDKIEFLQ-----NNL---LSAHTVWVNHTEVN 291 (304)
Q Consensus 258 -g~~~~~~~~l~~~g~l~-----~~~---~~~H~~~l~~~di~ 291 (304)
+.+ +++++ +.|+++ +++ ++.||+++++.+++
T Consensus 212 ~~~~--~~~~~-~~g~~~~~l~~~~~~~~~~~~~~~~~p~~~~ 251 (376)
T 1o12_A 212 NGLK--PLHHR-EIGITGAGLLLDDVKLELICDGVHLSREMVK 251 (376)
T ss_dssp TTBC--CCCSS-CCHHHHHHHHCTTCEEEEECSSSSSCHHHHH
T ss_pred cCcC--Chhhc-ccchhhhhhcCCcceEEEeCCCcCcCHHHHH
Confidence 332 34433 333332 565 57899999887443
No 52
>3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research CON nysgxrc; 2.60A {Bacillus halodurans}
Probab=99.70 E-value=1.6e-16 Score=145.66 Aligned_cols=172 Identities=16% Similarity=0.138 Sum_probs=105.3
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecC--ChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhh
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQ--SADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAK 95 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~--~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~ 95 (304)
+.+++|+|++|++++. . .+++|+|+||||++|++ ..+ +.+.++||++|++|+|||||+|+|+.....
T Consensus 5 ~~~~~i~~~~v~~~~~---~-~~~~v~i~~g~I~~i~~~~~~~------~~~~~~id~~g~~v~PG~ID~H~H~~~~~~- 73 (448)
T 3hm7_A 5 RFDLIIRSSTVVTETT---T-YRADVAIRNGIVSAITEPGSIS------SDDGPAIDGTGLHLFPGMVDVHVHFNEPGR- 73 (448)
T ss_dssp CCSEEEEEEEEECSSC---E-EEEEEEEETTEEEEEESTTCSC------TTSSCEEECTTCEEEECEEEEEECCCTTTS-
T ss_pred cccEEEEeeEEECCCC---c-eEeEEEEECCEEEEeeCccCCC------CCCCeEEECCCCEEecCEEEeeeccCCCCC-
Confidence 3468999999998652 3 68899999999999998 332 135689999999999999999999965210
Q ss_pred cccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCC-CC-----CHHHH---HHHHHH-cCCeEE
Q 022028 96 GIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-GQ-----HVSEM---AKAVEL-LGLRAC 165 (304)
Q Consensus 96 g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~-~~-----~~~~~---~~~~~~-~gir~~ 165 (304)
. + .+++. .....++..|||+++++. .. ..+.+ .+.+.. ..++..
T Consensus 74 --------~-~-------------~~~~~----~~~~~~~~~Gvtt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (448)
T 3hm7_A 74 --------T-E-------------WEGFA----SGSKSLAAGGVTTYFDMPLNSNPPTITREELDKKRQLANEKSLVDYR 127 (448)
T ss_dssp --------G-G-------------GCCSH----HHHHHHHTTTEEEEEECSSSSSSCSCSHHHHHHHHTHHHHHCSSEEE
T ss_pred --------C-c-------------HhHHH----HHHHHHHhCCEEEEEeCCCCCCCCCChHHHHHHHHHHhccCCeeEEE
Confidence 0 0 01111 123457899999999876 21 12222 222222 223332
Q ss_pred eecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcc---cCCCHHHHHHHHHHHHHhCCeeeEE
Q 022028 166 LVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQI---MNATDRLLLETRDMAREFKTGIHMH 242 (304)
Q Consensus 166 ~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~e~l~~~~~~a~~~~~~~~~H 242 (304)
...... +.. +++..++.+ .+.-.++.++..... ...+++.+.+++++|+++|+++.+|
T Consensus 128 ~~~~~~-------~~~--------~~~l~~l~~----~g~~~~~~~l~~~~~~~~~~~~~~~l~~~l~~a~~~g~~v~vH 188 (448)
T 3hm7_A 128 FWGGLV-------PGN--------IDHLQDLHD----GGVIGFKAFMSECGTDDFQFSHDETLLKGMKKIAALGSILAVH 188 (448)
T ss_dssp EEEECC-------TTC--------GGGHHHHHH----TTCSEEEEESSSCSSSSSCCCCHHHHHHHHHHHHHHTCCEEEE
T ss_pred EEEEec-------ccC--------HHHHHHHHH----cCCCEEEEeeccccCCccCcCCHHHHHHHHHHHHhcCCEEEEE
Confidence 211111 110 122223332 111224444433221 3458899999999999999999999
Q ss_pred ecC
Q 022028 243 VAE 245 (304)
Q Consensus 243 ~~E 245 (304)
+.+
T Consensus 189 ~~~ 191 (448)
T 3hm7_A 189 AES 191 (448)
T ss_dssp CCC
T ss_pred eCC
Confidence 744
No 53
>4ac7_C Urease subunit alpha; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 4ubp_C* 1ie7_C*
Probab=99.69 E-value=4.1e-16 Score=144.71 Aligned_cols=164 Identities=20% Similarity=0.238 Sum_probs=105.4
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhh-------hhcCCCceEEeCCCCEeeccccccCccch
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQ-------QFSQMADQIIDLQSQILLPGFVNTHVHTS 90 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~-------~~~~~~~~vID~~g~iv~PG~ID~H~Hl~ 90 (304)
..+++|+|++|++.. . +..++|+|+||||++|++..++.. ...+.+.++||++|++|+|||||+|+|+.
T Consensus 66 ~~dllI~n~~vvd~~---g-~~~~dI~I~dG~I~~Ig~~~~~~~~~~v~~~~~~~~~~~vIDa~G~~v~PG~ID~HvH~~ 141 (570)
T 4ac7_C 66 VLDLLLTNALILDYT---G-IYKADIGVKDGYIVGIGKGGNPDIMDGVTPNMIVGTATEVIAAEGKIVTAGGIDTHVHFI 141 (570)
T ss_dssp BCSEEEEEEEEEETT---E-EEEEEEEEETTEEEEEECCBCTTTCSSCCTTCBCCTTCEEEECTTCEEEECEEEEEEECC
T ss_pred CCCEEEECeEEECCC---C-cEEEEEEEECCEEEEeecCCCccccccccccccCCCCceEEeCCCCEEeeCEEecccccC
Confidence 457899999999843 3 367899999999999998643200 00123568999999999999999999983
Q ss_pred hhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC---------------CHHHHHH
Q 022028 91 QQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---------------HVSEMAK 155 (304)
Q Consensus 91 ~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~---------------~~~~~~~ 155 (304)
. +... ..++.+||||+++.+.. ....+.+
T Consensus 142 ~----------------------------Pg~~--------~aAl~gGvTTvv~gg~~p~~~~n~~p~~~~~~~l~~~l~ 185 (570)
T 4ac7_C 142 N----------------------------PDQV--------DVALANGITTLFGGGTGPAEGSKATTVTPGPWNIEKMLK 185 (570)
T ss_dssp C----------------------------TTHH--------HHHHHTTEEEEEEECSSSCHHHHHSSCCCHHHHHHHHHH
T ss_pred C----------------------------cchH--------HHHHhcCCeEEEecCcCcccccCCcCcCCcHHHHHHHHH
Confidence 2 1110 35789999999953210 1123344
Q ss_pred HHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHh
Q 022028 156 AVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF 235 (304)
Q Consensus 156 ~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~ 235 (304)
+++...++..+..... . ..+++..++++. |.+ ++..+..+..+++.+++++++|+++
T Consensus 186 aa~~~~v~~~~~g~~~-------~--------~~l~el~el~~a------Ga~--gfK~~~~~~~~~~~L~~aL~~A~~~ 242 (570)
T 4ac7_C 186 STEGLPINVGILGKGH-------G--------SSIAPIMEQIDA------GAA--GLKIHEDWGATPASIDRSLTVADEA 242 (570)
T ss_dssp HHTTCSSEEEEEEECC-------C--------SSHHHHHHHHHH------TCC--EEEEEGGGCCCHHHHHHHHHHHHHH
T ss_pred HhhhCCeeEEEEeccC-------C--------cCHHHHHHHHHc------CCC--eEeeccCCCCCHHHHHHHHHHHHHc
Confidence 4454455442221110 0 012233344432 221 2222334567999999999999999
Q ss_pred CCeeeEEec
Q 022028 236 KTGIHMHVA 244 (304)
Q Consensus 236 ~~~~~~H~~ 244 (304)
++++.+|+.
T Consensus 243 g~~V~iHae 251 (570)
T 4ac7_C 243 DVQVAIHSD 251 (570)
T ss_dssp TCEEEEECC
T ss_pred CCEEEEEcC
Confidence 999999975
No 54
>4ubp_C Protein (urease (chain C)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.92.1.1 c.1.9.2 PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 1ie7_C*
Probab=99.69 E-value=4.1e-16 Score=144.71 Aligned_cols=164 Identities=20% Similarity=0.238 Sum_probs=105.4
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhh-------hhcCCCceEEeCCCCEeeccccccCccch
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQ-------QFSQMADQIIDLQSQILLPGFVNTHVHTS 90 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~-------~~~~~~~~vID~~g~iv~PG~ID~H~Hl~ 90 (304)
..+++|+|++|++.. . +..++|+|+||||++|++..++.. ...+.+.++||++|++|+|||||+|+|+.
T Consensus 66 ~~dllI~n~~vvd~~---g-~~~~dI~I~dG~I~~Ig~~~~~~~~~~v~~~~~~~~~~~vIDa~G~~v~PG~ID~HvH~~ 141 (570)
T 4ubp_C 66 VLDLLLTNALILDYT---G-IYKADIGVKDGYIVGIGKGGNPDIMDGVTPNMIVGTATEVIAAEGKIVTAGGIDTHVHFI 141 (570)
T ss_dssp BCSEEEEEEEEEETT---E-EEEEEEEEETTEEEEEECCBCTTTCTTCCTTCBCCTTCEEEECTTCEEEECEEEEEEECC
T ss_pred CCCEEEECeEEECCC---C-cEEEEEEEECCEEEEeecCCCccccccccccccCCCCceEEeCCCCEEeeCEEEcccCCC
Confidence 457899999999843 3 367899999999999998643200 00123568999999999999999999983
Q ss_pred hhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC---------------CHHHHHH
Q 022028 91 QQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---------------HVSEMAK 155 (304)
Q Consensus 91 ~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~---------------~~~~~~~ 155 (304)
. +... ..++.+||||+++.+.. ....+.+
T Consensus 142 ~----------------------------Pg~~--------~aAl~gGvTTvv~gg~~p~~~~n~~p~~~~~~~l~~~l~ 185 (570)
T 4ubp_C 142 N----------------------------PDQV--------DVALANGITTLFGGGTGPAEGSKATTVTPGPWNIEKMLK 185 (570)
T ss_dssp C----------------------------TTHH--------HHHHHTTEEEEEEECCSSCHHHHHSSCCCHHHHHHHHHH
T ss_pred C----------------------------cchH--------HHHHhcCCeEEEecCccccccCCCcCCCCcHHHHHHHHH
Confidence 2 1110 35789999999953210 1223344
Q ss_pred HHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHh
Q 022028 156 AVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF 235 (304)
Q Consensus 156 ~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~ 235 (304)
+++...++..+..... . ..+++..++++. |.+ ++..+..+..+++.+++++++|+++
T Consensus 186 aa~~~~v~~~~~g~~~-------~--------~~l~el~el~~a------Ga~--gfK~~~~~~~~~~~L~~aL~~A~~~ 242 (570)
T 4ubp_C 186 STEGLPINVGILGKGH-------G--------SSIAPIMEQIDA------GAA--GLKIHEDWGATPASIDRSLTVADEA 242 (570)
T ss_dssp HHTTCSSEEEEEEECC-------C--------SSHHHHHHHHHH------TCC--EEEEEGGGCCCHHHHHHHHHHHHHH
T ss_pred HhhhCCeeEEEEeccC-------C--------cCHHHHHHHHHc------CCC--eEeeccCCCCCHHHHHHHHHHHHHc
Confidence 4454455442221110 0 012233344432 221 2222334567999999999999999
Q ss_pred CCeeeEEec
Q 022028 236 KTGIHMHVA 244 (304)
Q Consensus 236 ~~~~~~H~~ 244 (304)
++++.+|+.
T Consensus 243 g~~V~iHae 251 (570)
T 4ubp_C 243 DVQVAIHSD 251 (570)
T ss_dssp TCEEEEECC
T ss_pred CCEEEEEcC
Confidence 999999975
No 55
>3iv8_A N-acetylglucosamine-6-phosphate deacetylase; IDP01334, fruct phosphate, carbohydrate metabolism, hydrolase; HET: F6P; 2.53A {Vibrio cholerae} PDB: 3egj_A*
Probab=99.68 E-value=1.4e-16 Score=141.72 Aligned_cols=193 Identities=15% Similarity=0.087 Sum_probs=112.7
Q ss_pred EEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccCC
Q 022028 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (304)
Q Consensus 21 ~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~~ 100 (304)
++|+|++|++.+ ..+.+++|+|+||||.+|++..+. +.+.++||++|++|+|||||+|+|.....
T Consensus 5 ~~i~n~~i~~~~---~~~~~~~i~I~dG~I~~i~~~~~~-----~~~~~viD~~G~~v~PGfID~HvHg~~G~------- 69 (381)
T 3iv8_A 5 YALTNCKIYTGN---DVLVKHAVIINGDKIEAVCPIESL-----PSEMNVVDLNGANLSPGFIDLQLNGCGGV------- 69 (381)
T ss_dssp EEEEEEEEECSS---CEESSEEEEEETTEEEEEEEGGGS-----CTTCEEEEEEEEEEEECEEEEEECEETTE-------
T ss_pred EEEEccEEEcCC---CeEeccEEEEECCEEEEEeCCCCC-----CCCCeEEECCCCEEccCeEeeeecccCCC-------
Confidence 689999999854 466788999999999999876432 23568999999999999999999986421
Q ss_pred CCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC-CCHHH-------HHHHHHHcCCeEEeeccccc
Q 022028 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-QHVSE-------MAKAVELLGLRACLVQSTMD 172 (304)
Q Consensus 101 ~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~-~~~~~-------~~~~~~~~gir~~~~~~~~d 172 (304)
.|. ...+.|++.. ....+++.|||+++.... ...+. +.+..+. +...+++.. =
T Consensus 70 -~~~-----------d~~~~e~l~~----~~~a~~~~GvTt~l~t~~T~~~e~l~~al~~~~~~~~~-~~~~ilGiH--l 130 (381)
T 3iv8_A 70 -MFN-----------DEITAETIDT----MHKANLKSGCTSFLPTLITSSDENMRQAIAAAREYQAK-YPNQSLGLH--L 130 (381)
T ss_dssp -ETT-----------TSCSHHHHHH----HHHHHHHTTEEEEEEEEESCCHHHHHHHHHHHHHHHHH-CSSSBCCEE--E
T ss_pred -CCC-----------CCCCHHHHHH----HHHHHHhCCccccccccCCCCHHHHHHHHHHHHHHHhc-CCCceeEee--c
Confidence 111 0122344333 334567899999987531 11221 2222222 111111111 1
Q ss_pred CCCCCCCCcccCChHHHHH-HHHHHHHHHcCCCCCCeE-EEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhH
Q 022028 173 CGEGLPASWAVRTTDDCIQ-SQKELYAKHHHAADGRIR-IWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (304)
Q Consensus 173 ~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~ 250 (304)
+||++++.+.+.++.++++ -..+.++++.... +.++ +.++|.. ...+ +.+.++++|+.+.+ .++....
T Consensus 131 EGPfis~~~~Ga~~~~~i~~p~~~~~~~~~~~~-~~i~~vTlAPE~---~~~~----~i~~l~~~gi~vs~--GHs~A~~ 200 (381)
T 3iv8_A 131 EGPYLNVMKKGIHSVDFIRPSDDTMIDTICANS-DVIAKVTLAPEN---NKPE----HIEKLVKAGIVVSI--GHTNATY 200 (381)
T ss_dssp ECSSCCGGGCTTSCTTTCCCCCHHHHHHHHHTT-TSEEEEEECCTT---SCHH----HHHHHHHTTCEEEE--CSBCCCH
T ss_pred cCcccCHhhcCCCCHHHcCCCCHHHHHHHHhcc-CCeEEEEECCCC---CcHH----HHHHHHHCCCEEEe--cCCCCCH
Confidence 7888777776666555443 2233444443333 3454 4455542 2233 34455667877665 4444555
Q ss_pred HHHHHhc
Q 022028 251 QVVMDTR 257 (304)
Q Consensus 251 ~~~~~~~ 257 (304)
+++++.+
T Consensus 201 e~~~~a~ 207 (381)
T 3iv8_A 201 SEARKSF 207 (381)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555543
No 56
>2gwn_A Dihydroorotase; zinc-binding prote structural genomics, PSI, protein structure initiative, MID center for structural genomics, MCSG; HET: KCX GOL; 1.85A {Porphyromonas gingivalis}
Probab=99.68 E-value=6.6e-17 Score=148.39 Aligned_cols=95 Identities=22% Similarity=0.291 Sum_probs=68.0
Q ss_pred ccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecC-ChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcc
Q 022028 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQ-SADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (304)
Q Consensus 19 ~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~-~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~ 97 (304)
++++|+|++|++.+ . +.+++|+|+||||++|++ ..+... +..+.++||++|++|+|||||+|+|+....
T Consensus 4 m~~li~~~~v~~~~---~-~~~~~v~i~~g~I~~i~~~~~~~~~--~~~~~~viD~~g~~v~PGlID~H~H~~~~~---- 73 (452)
T 2gwn_A 4 MKILLRNALITNEG---K-TFPGSVMIDGAFISRIIEGELPADD--NLSADEVIECSGLRLFPGCIDDQVHFREPG---- 73 (452)
T ss_dssp SEEEEEEEEEEETT---E-EEEEEEEEETTEEEEEEESCCCTTC--CTTCSEEEECTTCEEEECEEEEEECCCTTT----
T ss_pred ccEEEECeEEECCC---c-eeeeeEEEECCEEEEEecCCCcccc--CCCCCeEEeCCCCEEecCEEeeccccCCCC----
Confidence 36789999999854 3 468899999999999986 432100 012458999999999999999999996421
Q ss_pred cCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCC
Q 022028 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG 146 (304)
Q Consensus 98 ~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~ 146 (304)
+ .++++++..+ ..++++||||++++.
T Consensus 74 -----~--------------~~~e~~~~~~----~~~~~~GvTt~~~~~ 99 (452)
T 2gwn_A 74 -----L--------------THKATIASES----RAAVAGGVTSFMDMP 99 (452)
T ss_dssp -----C--------------TTTCCHHHHH----HHHHHTTEEEEEECS
T ss_pred -----C--------------CcHHHHHHHH----HHHHhCCeEEEEcCC
Confidence 0 1123333333 345689999999876
No 57
>3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} PDB: 3t81_A 3t8l_A
Probab=99.68 E-value=5.9e-16 Score=146.46 Aligned_cols=207 Identities=19% Similarity=0.190 Sum_probs=121.6
Q ss_pred ccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhccc
Q 022028 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (304)
Q Consensus 19 ~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~ 98 (304)
.+++|+|++|++... ..+..++|+|+||||++|++... ...+.++||++|++|+|||||+|+|+..+.
T Consensus 35 ~dlli~n~~ivd~~~--~~~~~~dI~I~~G~I~~Vg~~~~-----~~~~~~vID~~G~~v~PG~ID~H~Hl~~~~----- 102 (608)
T 3nqb_A 35 FDVLITGGTLVDVVT--GELRPADIGIVGALIASVHEPAS-----RRDAAQVIDAGGAYVSPGLIDTHMHIESSM----- 102 (608)
T ss_dssp EEEEEESCEEECTTT--CCEEECEEEEETTEEEEEECTTS-----CCCEEEEEECTTSEEEECEEEEEECGGGGT-----
T ss_pred CCEEEECeEEEECCC--CeEEeeEEEEECCEEEEecCCCC-----CCCCCeEEeCCCCEEecCeEecccCccccc-----
Confidence 468999999998653 33457799999999999997542 123568999999999999999999996521
Q ss_pred CCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC--------CCHHHHHHHHHHcCCeEEeec-c
Q 022028 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--------QHVSEMAKAVELLGLRACLVQ-S 169 (304)
Q Consensus 99 ~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~--------~~~~~~~~~~~~~gir~~~~~-~ 169 (304)
+++++. ...++.+|+||+++... .....+.+.++..+++.+... .
T Consensus 103 -------------------~~~~~~-------~~~al~~GvTtvv~~p~~~~~v~g~~~~~~~l~~a~~~~~~v~~~~p~ 156 (608)
T 3nqb_A 103 -------------------ITPAAY-------AAAVVARGVTTIVWDPHEFGNVHGVDGVRWAAKAIENLPLRAILLAPS 156 (608)
T ss_dssp -------------------SCHHHH-------HHHHHTTTEEEEEECCHHHHHHHTHHHHHHHHHHHTTCSSEEEEEECC
T ss_pred -------------------CCHHHH-------HHHHHhCCeEEEEcCCccccccCCHHHHHHHHHHhhhcCcEEEEeccc
Confidence 123322 24578999999986431 112334555566677776543 2
Q ss_pred cccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEE--EeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCCh
Q 022028 170 TMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIW--FGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIP 247 (304)
Q Consensus 170 ~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~ 247 (304)
+...+.++........ .++.+++++. .+.+.+. ....+. ...++.+.+.++.|++.++++.+|+.+..
T Consensus 157 ~~P~~~~~~~~g~~~~----~~el~~l~~~-----~~v~glgE~~~~~~v-~~~d~~l~~~l~~A~~~g~pV~~Ha~~~~ 226 (608)
T 3nqb_A 157 CVPSAPGLERGGADFD----AAILADLLSW-----PEIGGIAEIMNMRGV-IERDPRMSGIVQAGLAAEKLVCGHARGLK 226 (608)
T ss_dssp CSSSSTTSCCCSCCCC----HHHHHHHHTS-----TTEEEEEEECCHHHH-HTTCHHHHHHHHHHHHHTCEEEECCTTCC
T ss_pred cCCCCCccccCcccCC----HHHHHHHHhc-----cCcceeeEeeccCCc-CCCcHHHHHHHHHHHHcCCEEEEcCCCCC
Confidence 2111111111111111 1222233221 1222221 111111 23456677789999999999999976543
Q ss_pred hhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc
Q 022028 248 YENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN 291 (304)
Q Consensus 248 ~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~ 291 (304)
.+ .+..+.+.|+. ..||+..+++.++
T Consensus 227 ~~-------------~L~~~~~aGv~-----~~H~~~~~eea~e 252 (608)
T 3nqb_A 227 NA-------------DLNAFMAAGVS-----SDHELVSGEDLMA 252 (608)
T ss_dssp HH-------------HHHHHHHTTCC-----EECCCCSHHHHHH
T ss_pred HH-------------HHHHHHHcCCC-----eeeccCCHHHHHH
Confidence 21 23334445542 3688777655554
No 58
>3mtw_A L-arginine carboxypeptidase CC2672; hydrolase; HET: KCX M3R; 1.70A {Caulobacter vibrioides}
Probab=99.67 E-value=2e-15 Score=133.48 Aligned_cols=109 Identities=20% Similarity=0.316 Sum_probs=77.1
Q ss_pred cEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccC
Q 022028 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (304)
Q Consensus 20 ~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~ 99 (304)
...|+|++|+++.. .+++++++|+|+||||++|++..+. .+.+.++||++|++|+|||||+|+|+......+...
T Consensus 3 ~~aI~narviD~~~-g~~i~~~~V~I~dG~I~~Ig~~~~~----~~~~~~vID~~G~~v~PG~ID~H~H~~~~~~~~~~~ 77 (403)
T 3mtw_A 3 IKAVSAARLLDVAS-GKYVDNPLVIVTDGRITSIGKKGDA----VPAGATAVDLPGVTLLPGLIDMHVHLDSLAEVGGYN 77 (403)
T ss_dssp EEEEEEEEEEETTT-TEEEESEEEEEETTEEEEEEETTCC----CCTTCEEEEEEEEEEEECEEEEEECTTCCTTCCGGG
T ss_pred cEEEEceEEEECCC-CcEecCcEEEEECCEEEEEeCCCCC----CCCCCEEEECCCCEEEeChheeeeCCccccccCccc
Confidence 36799999998653 3688999999999999999986543 124679999999999999999999997654332111
Q ss_pred CCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC
Q 022028 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ 148 (304)
Q Consensus 100 ~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~ 148 (304)
.. ..................+..++++..+....
T Consensus 78 ~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (403)
T 3mtw_A 78 SL---------------EYSDRFWSVVQTANAKKTLEAGFTTVRNVGAA 111 (403)
T ss_dssp GG---------------GSCHHHHHHHHHHHHHHHHHTTEEEEEECCCS
T ss_pred cc---------------cccHHHHhhhhhhhhhhccccccceeeccccc
Confidence 11 11122222333344566788899998877643
No 59
>1onw_A Isoaspartyl dipeptidase; amidohydrolase, hydrolase, metalloprotease; HET: KCX; 1.65A {Escherichia coli} SCOP: b.92.1.7 c.1.9.13 PDB: 1onx_A* 1po9_A* 1poj_A* 1pok_B* 2aqo_A* 1ybq_A* 2aqv_A*
Probab=99.67 E-value=1.3e-15 Score=136.95 Aligned_cols=194 Identities=18% Similarity=0.191 Sum_probs=116.1
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcc
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~ 97 (304)
|.+++|+|++|++++ . ..+++|+|+||||++|++..+.. . +.+.++||++|++|+|||||+|+|+....
T Consensus 7 ~~~~~i~n~~v~~~~---~-~~~~~v~i~~g~I~~ig~~~~~~--~-~~~~~viD~~g~~v~PG~iD~H~H~~~~~---- 75 (390)
T 1onw_A 7 AGFTLLQGAHLYAPE---D-RGICDVLVANGKIIAVASNIPSD--I-VPNCTVVDLSGQILCPGFIDQHVHLIGGG---- 75 (390)
T ss_dssp GCCEEEESCEEESSS---E-EEECEEEEETTEEEEEETTCCTT--S-SSSCEEEECTTCEEEECEEEEEECTTCCB----
T ss_pred cceEEEECcEEECCC---C-CccceEEEECCEEEEEecCcccC--C-CCCCeEEeCCCCEECcCeeEeeECccccC----
Confidence 346789999999854 2 46789999999999998754210 1 12458999999999999999999985311
Q ss_pred cCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC-----CH---HHHHHHHHHcCCeEEeecc
Q 022028 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-----HV---SEMAKAVELLGLRACLVQS 169 (304)
Q Consensus 98 ~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~-----~~---~~~~~~~~~~gir~~~~~~ 169 (304)
....+. . .+++ ..+.+++++|+||++++... .. ....+++.+.|++.+....
T Consensus 76 -~~~~~~---~---------~~~~-------~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~g 135 (390)
T 1onw_A 76 -GEAGPT---T---------RTPE-------VALSRLTEAGVTSVVGLLGTDSISRHPESLLAKTRALNEEGISAWMLTG 135 (390)
T ss_dssp -CTTSGG---G---------BCCC-------CCHHHHHHTTEEEEEECCCSCCSSCCHHHHHHHHHHHHHHTSEEEEEEE
T ss_pred -cccccc---c---------cCHH-------HHHHHHHHCCeeEEecCCCcccccCcHHHHHHHHHHHHhcCCceEEecc
Confidence 011110 0 1111 13456789999999987532 12 2345556677888654322
Q ss_pred cccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCC------eeeEEe
Q 022028 170 TMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKT------GIHMHV 243 (304)
Q Consensus 170 ~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~------~~~~H~ 243 (304)
.... +....... +......++.+. +. ++.++++.....+.+.++++.+.+++.+. .+++|+
T Consensus 136 ~~~~----~~~~~~~~----~~~~~~~~~~~~----g~-~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~g~~~~h~ 202 (390)
T 1onw_A 136 AYHV----PSRTITGS----VEKDVAIIDRVI----GV-KCAISDHRSAAPDVYHLANMAAESRVGGLLGGKPGVTVFHM 202 (390)
T ss_dssp CSCS----SCCCSSSC----HHHHHHHCTTEE----EE-EEEESSTTSCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEEE
T ss_pred ccCC----Cchhhhhh----hcchhhhHHHhh----cc-eeeecCCCCCCCCHHHHHHHHHHHhhhhhhhccCceEEEEe
Confidence 1111 11110111 111112222221 22 55667766667888888888888776543 367898
Q ss_pred cCChhhHHHHHH
Q 022028 244 AEIPYENQVVMD 255 (304)
Q Consensus 244 ~E~~~~~~~~~~ 255 (304)
.++....+...+
T Consensus 203 ~~~~~~~~~~~~ 214 (390)
T 1onw_A 203 GDSKKALQPIYD 214 (390)
T ss_dssp CSCTTTTHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 776665554443
No 60
>3ggm_A Uncharacterized protein BT9727_2919; bacillus cereus group., structural genomics, PSI-2, protein structure initiative; 2.00A {Bacillus thuringiensis serovarkonkukian}
Probab=99.66 E-value=2.3e-16 Score=109.38 Aligned_cols=70 Identities=24% Similarity=0.372 Sum_probs=56.2
Q ss_pred cccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchh
Q 022028 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQ 91 (304)
Q Consensus 18 ~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~ 91 (304)
+.+++|+|++|++++.. ...+++|+|+||||++|++..+.... ..+.++||++|++|+|||||+|+|+..
T Consensus 3 ~~~~li~n~~i~~~~~~--~~~~~~i~I~~g~I~~ig~~~~~~~~--~~~~~viD~~g~~v~PG~ID~H~H~~~ 72 (81)
T 3ggm_A 3 VPDMILYNGKITTLDPS--QPEVSAIAITDGLITAVGGDELLNSA--TEKTKKIDLKRKRAIPGLNDSHIHVIR 72 (81)
T ss_dssp CCSEEEESSEEECSCTT--CSEESEEEEETTEEEEEESGGGGGGC--CTTCEEEECTTCEEEECCCCTTEEEEC
T ss_pred cCCEEEECCEEEeCCCC--CccccEEEEECCEEEEEeCchHhccc--CCCCEEEECCCCEEeeCeEeeeeCCCC
Confidence 56789999999997643 22478999999999999986543211 235689999999999999999999976
No 61
>4gy7_A Urease; JACK bean, hydrolase, ME binding, nickel; HET: CME KCX; 1.49A {Canavalia ensiformis} PDB: 3la4_A* 4h9m_A*
Probab=99.66 E-value=2.1e-15 Score=146.39 Aligned_cols=81 Identities=22% Similarity=0.289 Sum_probs=60.7
Q ss_pred CCCCCCCCCC-CcccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhh-------hhcCCCceEEeCCCCEe
Q 022028 7 GGGSSSGSLG-SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQ-------QFSQMADQIIDLQSQIL 78 (304)
Q Consensus 7 ~~~~~~~~~~-~~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~-------~~~~~~~~vID~~g~iv 78 (304)
|+++++..+. ...+++|+|++|++.+ .+ .+++|.|+||||++||+...+.. ...+.+.++||++|++|
T Consensus 324 gmgq~~~~~~~~~~DLVItNA~IVD~t---Gi-~kADI~IkDGRIaAIGkagnpD~~dgV~pdl~ig~gtEVIDA~GkiV 399 (840)
T 4gy7_A 324 GMGQSCGHPPAISLDTVITNAVIIDYT---GI-IKADIGIKDGLIASIGKAGNPDIMNGVFSNMIIGANTEVIAGEGLIV 399 (840)
T ss_dssp TTTBCSSSCGGGSCSEEEEEEEEEETT---EE-EEEEEEEETTEEEEEECCBCTTTCSSCCTTSBCCTTCEEEECTTCEE
T ss_pred cCCcCCCCCCcccCCEEEeCeEEECCC---Ce-EEeeEEEECCEEEEEeccCCcccccccccccccCCCCEEEECCCCEE
Confidence 5566655432 3457999999999964 34 57899999999999997532210 01134679999999999
Q ss_pred eccccccCccchh
Q 022028 79 LPGFVNTHVHTSQ 91 (304)
Q Consensus 79 ~PG~ID~H~Hl~~ 91 (304)
+|||||+|+|+..
T Consensus 400 tPGfID~HvHl~~ 412 (840)
T 4gy7_A 400 TAGAIDCHVHYIC 412 (840)
T ss_dssp EECEEEEEEECCC
T ss_pred ccCeeeeccCCCC
Confidence 9999999999843
No 62
>1nfg_A D-hydantoinase; TIM barrel, hydrolase; HET: KCX; 2.70A {Ralstonia pickettii} SCOP: b.92.1.3 c.1.9.6
Probab=99.65 E-value=2.3e-16 Score=144.83 Aligned_cols=182 Identities=18% Similarity=0.184 Sum_probs=104.9
Q ss_pred cEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhhhhhcccC
Q 022028 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (304)
Q Consensus 20 ~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s~~~g~~~ 99 (304)
+++|+|++|++++ .. .+++|+|+||||++|++..+ .+.++||++|++|+|||||+|+|+..+....
T Consensus 2 ~~li~n~~v~~~~---~~-~~~~v~I~~g~I~~ig~~~~-------~~~~viD~~G~~v~PGlID~H~H~~~~~~~~--- 67 (457)
T 1nfg_A 2 DIIIKNGTIVTAD---GI-SRADLGIKDGKITQIGGALG-------PAERTIDAAGRYVFPGGIDVHTHVETVSFNT--- 67 (457)
T ss_dssp CEEEEEEEEEETT---EE-EEEEEEEETTEEEEESSCCC-------CCSEEEECTTCEEEECEEEEEECCSCEETTE---
T ss_pred cEEEEeeEEEeCC---Cc-eeeeEEEECCEEEEecCCCC-------CCCeEEeCCCCEEccceEeeccccccCcCCC---
Confidence 4789999999965 23 57899999999999987531 2458999999999999999999996421100
Q ss_pred CCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC----CHHHHHHHHHHcCC-eEEeecccccCC
Q 022028 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----HVSEMAKAVELLGL-RACLVQSTMDCG 174 (304)
Q Consensus 100 ~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~----~~~~~~~~~~~~gi-r~~~~~~~~d~g 174 (304)
+++++++.. ...++++||||++++... .....++...+... +......+.-.+
T Consensus 68 ------------------~~~e~~~~~----~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (457)
T 1nfg_A 68 ------------------QSADTFATA----TVAAACGGTTTIVDFCQQDRGHSLAEAVAKWDGMAGGKSAIDYGYHIIV 125 (457)
T ss_dssp ------------------ECSCCHHHH----HHHHHHTTEEEEEEEEECCTTSCHHHHHHHHHHHHTTTCSSEEEEEEEC
T ss_pred ------------------CChhhHHHH----HHHHHhCCcEEEEeCCCCCCCCChHHHHHHHHHHhcccCccCEEEEEee
Confidence 112333332 344678999999986522 11122222211100 110000000011
Q ss_pred CCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhH
Q 022028 175 EGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (304)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~ 250 (304)
+ .. .. +.. +.++++...+...++..+........+++.+.++++.+++.+..+.+|. |.....
T Consensus 126 ~----~~---~~-~~~----~~~~~~~~~G~~~~k~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~H~-e~~~~~ 188 (457)
T 1nfg_A 126 L----DP---TD-SVI----EELEVLPDLGITSFKVFMAYRGMNMIDDVTLLKTLDKAVKTGSLVMVHA-ENGDAA 188 (457)
T ss_dssp S----SC---CH-HHH----HHTTTGGGGTCCEEEEESSSTTTTBCCHHHHHHHHHHHHHHTCEEEEEC-CCHHHH
T ss_pred c----CC---ch-hHH----HHHHHHHHcCCCEEEEeeccCCCCCCCHHHHHHHHHHHHhcCCEEEEeC-CCHHHH
Confidence 1 00 11 211 2222222222234555444332234567778888899999999999996 665443
No 63
>3mkv_A Putative amidohydrolase; sargasso SEA, structural genomics, protein structure initiat NEW YORK structural genomix research consortium, nysgxrc; HET: KCX; 2.40A {Undefined}
Probab=99.62 E-value=8.9e-16 Score=136.42 Aligned_cols=71 Identities=17% Similarity=0.390 Sum_probs=59.3
Q ss_pred CCcccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhhhcCCCceEEeCCCCEeeccccccCccchhh
Q 022028 16 GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQ 92 (304)
Q Consensus 16 ~~~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~~~~~vID~~g~iv~PG~ID~H~Hl~~s 92 (304)
|+|++++|+|++|++++. .+++++++|+|+||||++|++.... +.+.++||++|++|+|||||+|+|+..+
T Consensus 1 MsM~~lli~ng~i~d~~~-~~~~~~~dV~I~~G~I~~Ig~~~~~-----~~~~~vID~~G~~v~PGfID~H~H~~~~ 71 (426)
T 3mkv_A 1 MSLTTFLFRNGALLDPDH-PDLLQGFEILIEDGFIREVSDKPIK-----SSNAHVIDVKGKTIMPGLIDLHVHVVAI 71 (426)
T ss_dssp --CCEEEEEEEEECCTTS-SSCEEEEEEEEETTEEEEEESSCCC-----CSSCEEEECTTCEEEECEEEEEECTTCC
T ss_pred CCcCcEEEECeEEEeCCC-CcEecCcEEEEECCEEEEecCCCCC-----CCCCEEEECCCCEEEeChhhhhhCcccc
Confidence 357889999999998764 3577899999999999999986542 2367999999999999999999998653
No 64
>4ep8_C Urease subunit alpha; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1ef2_A* 4epb_C* 4epd_C* 4epe_C* 1ejx_C* 1ejw_C* 1fwj_C* 1kra_C 2kau_C* 1a5k_C 1ejv_C* 1ejt_C* 1eju_C* 1ejs_C* 1a5m_C 1a5n_C 1ejr_C* 1a5l_C 1a5o_C 1fwa_C* ...
Probab=99.51 E-value=6.2e-15 Score=138.98 Aligned_cols=84 Identities=25% Similarity=0.270 Sum_probs=62.7
Q ss_pred CCCCCCCCCCCcccEEEEccEEEecCCCCceeeeeeEEEeCCEEEEecCChhhhhh-----hcCCCceEEeCCCCEeecc
Q 022028 7 GGGSSSGSLGSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQ-----FSQMADQIIDLQSQILLPG 81 (304)
Q Consensus 7 ~~~~~~~~~~~~~~~li~~~~ii~~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~-----~~~~~~~vID~~g~iv~PG 81 (304)
|++++........+++|+|++|++.+ .+ .+++|+|+||||++||+..++... ..+.+.++||++|++|+||
T Consensus 53 ~~~~~~~~~~~~~DlvI~Na~Ivd~~---Gi-~kaDIlIkDGrIaaIG~ag~pd~~d~vdl~~~~g~eVIDA~GkiV~PG 128 (566)
T 4ep8_C 53 GMGQGQMLAADCVDLVLTNALIVDHW---GI-VKADIGVKDGRIFAIGKAGNPDIQPNVTIPIGAATEVIAAEGKIVTAG 128 (566)
T ss_dssp TTTBCCCCGGGSCSEEEEEEEEEETT---EE-EEEEEEEETTEEEEEECEECTTTCSSCCEECCTTCEEEECTTCEEEEC
T ss_pred ccCCCCCCCCCCCCEEEECcEEECCC---Ce-EEeEEEEECCEEEEeecCCCcccccccccccCCCCEEEECCCCEEEcC
Confidence 44555443344668999999999864 44 478999999999999975432100 0134679999999999999
Q ss_pred ccccCccchhhhh
Q 022028 82 FVNTHVHTSQQLA 94 (304)
Q Consensus 82 ~ID~H~Hl~~s~~ 94 (304)
|||+|+|+.....
T Consensus 129 ~ID~HvH~~~~~~ 141 (566)
T 4ep8_C 129 GIDTHIHWICPQQ 141 (566)
T ss_dssp EEEEEEECSCTTH
T ss_pred EEEecccccCCCc
Confidence 9999999976544
No 65
>2pgf_A Adenosine deaminase; metallo-dependent hydrolase, structural genomics, medical ST genomics of pathogenic protozoa consortium, MSGPP; HET: MSE ADN; 1.89A {Plasmodium vivax} PDB: 2pgr_A* 2qvn_A* 3ewc_A* 3ewd_A* 2amx_A
Probab=99.36 E-value=1.1e-12 Score=116.81 Aligned_cols=172 Identities=16% Similarity=0.089 Sum_probs=113.7
Q ss_pred CCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCccee---ecCC----C--CC----H----HHHHHHHHHc--
Q 022028 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCF---AEAG----G--QH----V----SEMAKAVELL-- 160 (304)
Q Consensus 100 ~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv---~d~~----~--~~----~----~~~~~~~~~~-- 160 (304)
..++.+|+....+......++++++..++.++.++++.|||++ .+.. . .. . +.+.++.++.
T Consensus 90 ~~~L~~~l~~~~~~~~~~~t~ed~~~~a~~~l~e~~~~GV~y~E~r~dp~~~~~~~gl~~~~~~~a~~~~~~~a~~~~~~ 169 (371)
T 2pgf_A 90 GKSLGEFVEKAIKVADIFHDYEVIEDLAKHAVFNKYKEGVVLMEFRYSPTFVAFKYNLDIELIHQAIVKGIKEVVELLDH 169 (371)
T ss_dssp CSCHHHHHHHHHHHGGGCCSHHHHHHHHHHHHHHHHHHTEEEEEEEECHHHHHTTTTCCHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCEEEEEEECcccccccCCCCHHHHHHHHHHHHHHHHHHccC
Confidence 3466778777666666678899999999999999999999997 3321 1 11 1 2333344567
Q ss_pred CCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeee
Q 022028 161 GLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIH 240 (304)
Q Consensus 161 gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~ 240 (304)
|++..+...+... .+++ ...+.++ ....+ .++ .+++.+.+.+.. ++.++.+++.|+++|+++.
T Consensus 170 gi~~~li~~~~r~---~~~~----~~~~~~~----~a~~~---~~~--vvg~dl~g~e~~-~~~~~~~~~~A~~~gl~~~ 232 (371)
T 2pgf_A 170 KIHVALMCIGDTG---HEAA----NIKASAD----FCLKH---KAD--FVGFDHGGHEVD-LKEYKEIFDYVRESGVPLS 232 (371)
T ss_dssp SSEEEEEEEEEES---STTC----CHHHHHH----HHHHT---TTT--EEEEEEEESCCC-GGGGHHHHHHHHHTTCCBE
T ss_pred CCEEEEEEEecCC---CCHH----HHHHHHH----HHHhC---CCC--EEEEecCCCccc-HHHHHHHHHHHHHcCCcEE
Confidence 8887555444321 1221 2223322 22221 122 345666677666 7889999999999999999
Q ss_pred EEecCChhhHHHHHHhcCCCCCH-HHHHHHhCCCCCCeeEEEeccCCcch--hc-----------cccccccccc
Q 022028 241 MHVAEIPYENQVVMDTRKVDHGT-VTFLDKIEFLQNNLLSAHTVWVNHTE--VN-----------CTFGNFKYAV 301 (304)
Q Consensus 241 ~H~~E~~~~~~~~~~~~g~~~~~-~~~l~~~g~l~~~~~~~H~~~l~~~d--i~-----------~p~sN~~l~~ 301 (304)
+|++|+.. | .+ ....+..++++++ .+.||+++++++ ++ ||.||.++++
T Consensus 233 ~HagE~~~---------~---~~~~~i~~al~~lg~~-ri~Hgv~l~~~~~l~~~l~~~~i~v~~cP~SN~~l~~ 294 (371)
T 2pgf_A 233 VHAGEDVT---------L---PNLNTLYSAIQVLKVE-RIGHGIRVAESQELIDMVKEKNILLEVCPISNVLLKN 294 (371)
T ss_dssp EEESCCTT---------S---SSSHHHHHHHHTSCCS-EEEECGGGGGCHHHHHHHHHTTCEEEECHHHHHHTTS
T ss_pred EeeCCCCC---------C---CchHHHHHHHhccCCC-EEecchhccccHHHHHHHHHcCCeEEECcchhHHhCC
Confidence 99999841 1 02 2333445566766 699999999887 54 9999999875
No 66
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=98.97 E-value=2.2e-09 Score=93.47 Aligned_cols=170 Identities=18% Similarity=0.132 Sum_probs=101.1
Q ss_pred CccccccccccCccCCCChHHHHHHHHHHHHHHHhcCccee---ecC-----CCCCHH--------HHHHHHHHcCCeEE
Q 022028 102 DLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCF---AEA-----GGQHVS--------EMAKAVELLGLRAC 165 (304)
Q Consensus 102 ~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv---~d~-----~~~~~~--------~~~~~~~~~gir~~ 165 (304)
++.+++..+.+...-..++++++..+...+.++.+.||+.+ .+. .+...+ .+.++.++.|++..
T Consensus 55 ~l~~fl~~~~~~~~vl~t~ed~~~~a~~~~~~~~~dgV~y~Eir~~P~~~~~~gl~~~~~v~~v~~~~~~a~~~~gi~~~ 134 (326)
T 3pao_A 55 NLQEFLDLYYAGADVLRTEQDFYDLTWAYLQKCKAQNVVHVEPFFDPQTHTDRGIPFEVVLAGIRAALRDGEKLLGIRHG 134 (326)
T ss_dssp SHHHHHHHHHHHGGGCCSHHHHHHHHHHHHHHHHHTTEEEECCEECHHHHHTTTCCHHHHHHHHHHHHHHHHHHHCCEEC
T ss_pred CHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCeEEEEEEChHHhccCCCCHHHHHHHHHHHHHHHHhhCceEEE
Confidence 44455554444444556788999999999999999999986 211 111122 22334455677553
Q ss_pred eecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecC
Q 022028 166 LVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAE 245 (304)
Q Consensus 166 ~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E 245 (304)
+-..++.. . .++. ..+..++...+.+ ..+.+.++- .....+++.++.+++.|++.|+++.+|++|
T Consensus 135 lI~~~~R~---~-------~~~~-a~~~~~~a~~~~~---~vvG~dL~g-~E~~~~~~~~~~~~~~A~~~gl~~~~HagE 199 (326)
T 3pao_A 135 LILSFLRH---L-------SEEQ-AQKTLDQALPFRD---AFIAVGLDS-SEVGHPPSKFQRVFDRARSEGFLTVAHAGE 199 (326)
T ss_dssp CEEEEETT---S-------CHHH-HHHHHHHHGGGGG---GCSEEEEES-CCTTCCGGGGHHHHHHHHHTTCEECEEESS
T ss_pred EEEEeCCC---C-------CHHH-HHHHHHHHhhccc---cceeeCCCC-CCCCCCHHHHHHHHHHHHHcCCceeeecCC
Confidence 32222211 1 1222 2233333334432 333333331 123456778889999999999999999999
Q ss_pred ChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcc--hhc-----------cccccccccc
Q 022028 246 IPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHT--EVN-----------CTFGNFKYAV 301 (304)
Q Consensus 246 ~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~--di~-----------~p~sN~~l~~ 301 (304)
+..... ..+..++|+.+ -+.||++++++ +++ ||.||.++++
T Consensus 200 ~~~~~~--------------i~~al~~lg~~-rigHgv~l~~d~~l~~~l~~~~i~le~cP~SN~~l~~ 253 (326)
T 3pao_A 200 EGPPEY--------------IWEALDLLKVE-RIDHGVRAFEDERLMRRLIDEQIPLTVCPLSNTKLCV 253 (326)
T ss_dssp SSCHHH--------------HHHHHHTTCCS-SEEECGGGGGCHHHHHHHHHHTCCEEECHHHHHHTTS
T ss_pred CCCHHH--------------HHHHHhcCCCc-eeeeeeeecccHHHHHHHHHcCCeEEECchhHHHhCC
Confidence 864221 12233445544 37999999954 554 9999999975
No 67
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=98.88 E-value=1.5e-08 Score=88.84 Aligned_cols=169 Identities=14% Similarity=0.080 Sum_probs=99.2
Q ss_pred ccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceee---cC-----CCCCHHH----HHH----HHHHcCCeEEe
Q 022028 103 LMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFA---EA-----GGQHVSE----MAK----AVELLGLRACL 166 (304)
Q Consensus 103 ~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~---d~-----~~~~~~~----~~~----~~~~~gir~~~ 166 (304)
+.+++....+...-..++++++..+...+.++.+.||..+- +. .+...+. +.+ +.++.|++..+
T Consensus 59 l~~fl~~f~~~~~vl~~~e~~~~~~~~~l~~~~~dgV~y~Eir~~P~~~~~~gl~~~~~v~~v~~~~~~a~~~~gi~~~l 138 (343)
T 3rys_A 59 LQSFLDLYYANMAVLQTEQDFTDMTRAYLERAAAGGVRHAEIMMDPQAHTSRGVALETCVNGVANALATSEEDFGVSTLL 138 (343)
T ss_dssp HHHHHHHHHHHGGGCCSHHHHHHHHHHHHHHHHHTTEEEEEEEECHHHHHTTTCCHHHHHHHHHHHHTTHHHHHSCEEEE
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCEEEEEEecHHHhccCCCCHHHHHHHHHHHHHHHhhcCceeEEE
Confidence 33444433332333457888999999999999999999872 11 1112222 222 33455765543
Q ss_pred ecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCC
Q 022028 167 VQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEI 246 (304)
Q Consensus 167 ~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~ 246 (304)
-..++.. . .++.. .+..++...+ .+..+.+.++- .....+++.++.+++.|++.|+++.+|++|+
T Consensus 139 I~~~~R~---~-------~~~~a-~~~l~~a~~~---~~~vvG~dL~g-~E~~~~~~~~~~~~~~A~~~gl~~~~HagE~ 203 (343)
T 3rys_A 139 IAAFLRD---M-------SEDSA-LEVLDQLLAM---HAPIAGIGLDS-AEVGNPPSKFERLYQRAAEAGLRRIAHAGEE 203 (343)
T ss_dssp EEEEETT---S-------CHHHH-HHHHHHHHHT---TCCCCEEEEES-CCTTCCGGGGHHHHHHHHHTTCEEEEEESSS
T ss_pred EEEeCCC---C-------CHHHH-HHHHHHHHhC---CCCEEEEecCC-cccCCCHHHHHHHHHHHHHCCCeEEEeeCCC
Confidence 3333211 1 12222 2333333334 23444444432 2245577888999999999999999999998
Q ss_pred hhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCc--chhc-----------cccccccccc
Q 022028 247 PYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH--TEVN-----------CTFGNFKYAV 301 (304)
Q Consensus 247 ~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~--~di~-----------~p~sN~~l~~ 301 (304)
.... ...+..++++.+ -+.||+++++ ++++ ||.||.++++
T Consensus 204 ~~~~--------------~i~~al~~lg~~-rIgHgv~l~~d~~l~~~l~~~~i~le~cP~SN~~l~~ 256 (343)
T 3rys_A 204 GPAS--------------YITEALDVLHVE-RIDHGIRCMEDTDVVQRLVAEQVPLTVCPLSNVRLRA 256 (343)
T ss_dssp SCHH--------------HHHHHHHTSCCS-EEEECGGGGGCHHHHHHHHHHTCCEEECHHHHHHTTS
T ss_pred CCHH--------------HHHHHHhcCCcc-eeeeeeeecCChHHHHHHHhcCCCeeEchhHHHHhCC
Confidence 6422 112234445554 4899999985 3444 9999999986
No 68
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=98.69 E-value=3.9e-07 Score=79.07 Aligned_cols=179 Identities=14% Similarity=0.073 Sum_probs=96.2
Q ss_pred cccccCccchhhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCCC----CHHHHHHH
Q 022028 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----HVSEMAKA 156 (304)
Q Consensus 81 G~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~----~~~~~~~~ 156 (304)
||||+|+|+.....+....+. ..| ..+ .+ ...+...+.++.++|||++++.+.. ....+.+.
T Consensus 17 G~iD~H~Hl~~~~~~~~~~~~--~~~---------~~~--~~-~~~~~~~l~~~~~~Gv~~iv~~~~~~~~~~~~~~~~~ 82 (314)
T 2vc7_A 17 GFTLIHEHLRVFSEAVRQQWP--HLY---------NED--EE-FRNAVNEVKRAMQFGVKTIVDPTVMGLGRDIRFMEKV 82 (314)
T ss_dssp CSEESSCBSCBCCHHHHHHCG--GGC---------CHH--HH-HHHHHHHHHHHHHTTCCEEEECCCBTTTCCHHHHHHH
T ss_pred CCcccccccccCcchhcccCc--chh---------hhc--cc-HHHHHHHHHHHHHcCCCEEEecCCCCCCcCHHHHHHH
Confidence 999999999753221100000 012 011 11 2344555677889999999887632 35666777
Q ss_pred HHHcCCeEEeecccccCCCCCCCCcc-cCChHHHHHHHHHHHHHH--cCC-----CCCCeEEEEeeCcccCCCHHHHHHH
Q 022028 157 VELLGLRACLVQSTMDCGEGLPASWA-VRTTDDCIQSQKELYAKH--HHA-----ADGRIRIWFGIRQIMNATDRLLLET 228 (304)
Q Consensus 157 ~~~~gir~~~~~~~~d~g~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~-----~~~~i~~~~~~~~~~~~~~e~l~~~ 228 (304)
+++.|++.+.+..+.... ..+.+. ... ++...++++.. ... ..+.+++.+..........+.+++.
T Consensus 83 ~~~~~~~v~~~~G~hp~~--~~~~~~~~~~----~~~l~~~~~~~~~~gige~G~~~g~i~~~ld~~~~~~~q~~~~~~~ 156 (314)
T 2vc7_A 83 VKATGINLVAGTGIYIYI--DLPFYFLNRS----IDEIADLFIHDIKEGIQGTLNKAGFVKIAADEPGITKDVEKVIRAA 156 (314)
T ss_dssp HHHHCCEEEECEEBCCSS--CCCGGGTTCC----HHHHHHHHHHHHHTCSSSSSCCCCSEEEECCTTCSCHHHHHHHHHH
T ss_pred HHHcCCeEEEEeecCCCC--CCchhhhccC----HHHHHHHHHHHHHhhcccCCCCCCeEEEeecCCCCCHHHHHHHHHH
Confidence 788888776443322110 001111 111 12222222221 111 1234444444432222223457788
Q ss_pred HHHHHHhCCeeeEEecC-ChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccC-Ccchh
Q 022028 229 RDMAREFKTGIHMHVAE-IPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV-NHTEV 290 (304)
Q Consensus 229 ~~~a~~~~~~~~~H~~E-~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l-~~~di 290 (304)
.++|+++++++.+|+.+ .....+ .++.+++.|+...++++.||... +.++.
T Consensus 157 ~~lA~~~~~pv~iH~~~~~~~~~~-----------~~~~l~~~~~~~~~~~i~H~~~~~~~~~~ 209 (314)
T 2vc7_A 157 AIANKETKVPIITHSNAHNNTGLE-----------QQRILTEEGVDPGKILIGHLGDTDNIDYI 209 (314)
T ss_dssp HHHHHHHCCCEEEECCTTTTHHHH-----------HHHHHHHTTCCGGGEEETTGGGCCCHHHH
T ss_pred HHHHHHHCCEEEEeCCCcccChHH-----------HHHHHHHcCCCcccEEEECCCCCCCHHHH
Confidence 99999999999999863 122111 56777777875557788899863 44433
No 69
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ...
Probab=98.52 E-value=1.1e-06 Score=77.50 Aligned_cols=152 Identities=12% Similarity=0.074 Sum_probs=90.9
Q ss_pred ChHHHHHHHHHHHHHHHhcCcceee---cC---C--------------CCCHHH----HH----HHHHHcCCeEEeeccc
Q 022028 119 TEEDSYISTLLCGIELIHSGVTCFA---EA---G--------------GQHVSE----MA----KAVELLGLRACLVQST 170 (304)
Q Consensus 119 ~~e~~~~~~~~~~~~~l~~GvTtv~---d~---~--------------~~~~~~----~~----~~~~~~gir~~~~~~~ 170 (304)
++++++..+...+.++.+.||..+- +. . +...+. +. ++..+.|+..-+-..+
T Consensus 72 ~~edl~~~a~e~~ed~a~dgV~Y~Eir~~P~~~~~~~~~~~~~~~~~~gl~~~~vv~~v~~~~~~a~~~~gi~~~lI~~~ 151 (367)
T 3iar_A 72 CREAIKRIAYEFVEMKAKEGVVYVEVRYSPHLLANSKVEPIPWNQAEGDLTPDEVVALVGQGLQEGERDFGVKARSILCC 151 (367)
T ss_dssp CHHHHHHHHHHHHHHHHTTTEEEEEEEECGGGGCSSSCSSCGGGCCCCSCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHcCCEEEEEEecHHHhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHhcCCeEEEEEEe
Confidence 5788998899999999999999862 11 0 112222 22 2334457665332222
Q ss_pred ccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCccc-CCCH---HHHHHHHHHHHHhCCeeeEEecCC
Q 022028 171 MDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIM-NATD---RLLLETRDMAREFKTGIHMHVAEI 246 (304)
Q Consensus 171 ~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~---e~l~~~~~~a~~~~~~~~~H~~E~ 246 (304)
+-. .+ . .. .+..++...+.. ++.+ ++...+.. ..++ +.+..+++.|++.|+++.+|++|+
T Consensus 152 ~R~---~~-~-------~a-~e~~~la~~~~~--~~vv--G~dL~g~E~~~~~~~~~~f~~~f~~A~~~gl~~~~HagE~ 215 (367)
T 3iar_A 152 MRH---QP-N-------WS-PKVVELCKKYQQ--QTVV--AIDLAGDETIPGSSLLPGHVQAYQEAVKSGIHRTVHAGEV 215 (367)
T ss_dssp ETT---CG-G-------GH-HHHHHHHHHTTT--TTEE--EEEEESCTTSTTGGGCHHHHHHHHHHHHHTCEEEEEESSS
T ss_pred CCC---CC-H-------HH-HHHHHHHHhhCC--CCEE--EEcCCCcccCCCcchHHHHHHHHHHHHHcCCeeEEecCCc
Confidence 211 11 1 11 233444444432 2333 44443432 2343 678889999999999999999998
Q ss_pred hhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCc--chhc-----------cccccccccc
Q 022028 247 PYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH--TEVN-----------CTFGNFKYAV 301 (304)
Q Consensus 247 ~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~--~di~-----------~p~sN~~l~~ 301 (304)
..... ..+..++++.+ -+.||+++.+ +.++ ||.||.++++
T Consensus 216 ~~~~~--------------i~~al~~lg~~-RIgHgv~l~~d~~l~~~l~~~~i~le~cP~SN~~l~~ 268 (367)
T 3iar_A 216 GSAEV--------------VKEAVDILKTE-RLGHGYHTLEDQALYNRLRQENMHFEICPWSSYLTGA 268 (367)
T ss_dssp SCHHH--------------HHHHHHTSCCS-EEEECGGGGGCHHHHHHHHHTTCEEEECHHHHHHTSS
T ss_pred CChHH--------------HHHHHHccCCc-eeeeeeeecCCHHHHHHHHhCCcEEEECHHHHHHhCC
Confidence 75322 11233345544 4899999975 3444 9999999975
No 70
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...
Probab=98.34 E-value=5.8e-06 Score=72.22 Aligned_cols=144 Identities=13% Similarity=0.030 Sum_probs=75.0
Q ss_pred HHHHHHHhcCcceeecCCC----CCHHHHHHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcC-C
Q 022028 129 LCGIELIHSGVTCFAEAGG----QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHH-A 203 (304)
Q Consensus 129 ~~~~~~l~~GvTtv~d~~~----~~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 203 (304)
..+.++.++|||++++.+. .....+.+.++..+++.+.+..+.- ..|........++..+...+.+..... .
T Consensus 51 ~~l~~~~~aGV~~iv~~~~~~~~~~~~~~~~la~~~~~~i~~~~G~hp---~~p~~~~~~~~~~l~~~l~~~~~~gi~~~ 127 (330)
T 2ob3_A 51 RGLRRARAAGVRTIVDVSTFDIGRDVSLLAEVSRAADVHIVAATGLWF---DPPLSMRLRSVEELTQFFLREIQYGIEDT 127 (330)
T ss_dssp HHHHHHHHTTCCEEEECCCGGGTCCHHHHHHHHHHHTCEEECEEECCS---CCCHHHHTCCHHHHHHHHHHHHHTCSTTS
T ss_pred HHHHHHHHcCCCEEEeCCCCCcCCCHHHHHHHHHHhCCcEEEEecCCc---CCCchhccCCHHHHHHHHHHHHHhhcccc
Confidence 3456788999999998764 2355666667777766543322210 011111111111111222222211111 1
Q ss_pred --CCCCeEEEEeeCcccCCCHHH---HHHHHHHHHHhCCeeeEEec-CChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCe
Q 022028 204 --ADGRIRIWFGIRQIMNATDRL---LLETRDMAREFKTGIHMHVA-EIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNL 277 (304)
Q Consensus 204 --~~~~i~~~~~~~~~~~~~~e~---l~~~~~~a~~~~~~~~~H~~-E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~ 277 (304)
..+.+.+++. +..++.+ +++..++|++.|+++.+|.. .+....+ .++.|++.|.-..++
T Consensus 128 ~~k~~aiEiGld----~~~~~~q~~~f~~q~~lA~~~glPv~iH~~~~~r~a~e-----------~l~iL~~~g~~~~~~ 192 (330)
T 2ob3_A 128 GIRAGIIKVATT----GKATPFQELVLKAAARASLATGVPVTTHTAASQRDGEQ-----------QAAIFESEGLSPSRV 192 (330)
T ss_dssp CCCCSEEEEECS----SSCCHHHHHHHHHHHHHHHHHCCCEEEECCGGGTHHHH-----------HHHHHHHTTCCGGGE
T ss_pred ccceeEEEEeCC----CCCCHHHHHHHHHHHHHHHHhCCeEEEECCCCCCCHHH-----------HHHHHHHcCcCcccE
Confidence 1122344443 2334554 77889999999999999974 1222111 466677767522355
Q ss_pred eEEEec-cCCcchh
Q 022028 278 LSAHTV-WVNHTEV 290 (304)
Q Consensus 278 ~~~H~~-~l~~~di 290 (304)
.+.||. ..+.+..
T Consensus 193 ~i~H~f~~~~~e~a 206 (330)
T 2ob3_A 193 CIGHSDDTDDLSYL 206 (330)
T ss_dssp EECSGGGCCCHHHH
T ss_pred EEeCCCCCCCHHHH
Confidence 788998 4554333
No 71
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=98.20 E-value=3e-05 Score=68.16 Aligned_cols=184 Identities=14% Similarity=0.111 Sum_probs=100.7
Q ss_pred cccccCccchhhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC----CCHHHHHHH
Q 022028 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG----QHVSEMAKA 156 (304)
Q Consensus 81 G~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~----~~~~~~~~~ 156 (304)
|++.+|=|+.... .+...+.+ ...+..++....+...+.++-..|+.|++|... .....+.+.
T Consensus 52 G~tl~HEHl~~~~-~~~~~~~~------------~~~~~~~~~~~~~~~~l~~~k~~Gg~tIVd~T~~g~GRd~~~l~~i 118 (360)
T 3tn4_A 52 GKTLIHEHFLFGY-PGFQGDVT------------RGTFREDESLRVAVEAAEKMKRHGIQTVVDPTPNDCGRNPAFLRRV 118 (360)
T ss_dssp CSEESSCEEEECC-TTGGGGTT------------TSCCCHHHHHHHHHHHHHHHHHTTCCEEEECCCTTTTCCHHHHHHH
T ss_pred CCceeccCeeecC-hhhhcccc------------cchhhhhhHHHHHHHHHHHHHhcCCCeEEECCCCCcCcCHHHHHHH
Confidence 8999999986421 11000000 011223333444555567778899999998754 457788888
Q ss_pred HHHcCCeEEeecccccCCCCCCCCcc------cCChHHHHHHHHHHHHHHcC---CCCCCeEEEEeeCcccCCCHHHHHH
Q 022028 157 VELLGLRACLVQSTMDCGEGLPASWA------VRTTDDCIQSQKELYAKHHH---AADGRIRIWFGIRQIMNATDRLLLE 227 (304)
Q Consensus 157 ~~~~gir~~~~~~~~d~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~~~e~l~~ 227 (304)
.++.|++.+.+-.+.-.+. .++.+. ....++..+...+.+....+ ...|.|+.+.........-++.+++
T Consensus 119 s~~tGv~IV~~TG~y~~~~-~~p~~~~~~~~~~~~~e~l~~~~i~Ei~~Gi~~tgikaG~I~~~~~~~~~t~~E~k~frA 197 (360)
T 3tn4_A 119 AEETGLNIICATGYYYEGE-GAPPYFQFRRLLGTAEDDIYDMFMAELTEGIADTGIKAGVIKLASSKGRITEYEKMFFRA 197 (360)
T ss_dssp HHHHCCEEEEEECCCCGGG-SCTHHHHHHHHHTCHHHHHHHHHHHHHHTCSTTSCCCCSEEEEECBTTBCCHHHHHHHHH
T ss_pred HHHcCCCEEEeCccccCcc-cCCcccchhhhcccCHHHHHHHHHHHHHhccccCCCcceEEEEEccCCCCCHHHHHHHHH
Confidence 9999999976644332111 111111 01111222222222222211 2235555443322221222336889
Q ss_pred HHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcch
Q 022028 228 TRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTE 289 (304)
Q Consensus 228 ~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~d 289 (304)
..+++++.|+++.+|..+.....+ .++.|.+.|+--+++++.|++.-++.+
T Consensus 198 ~a~aa~etG~Pv~iHt~~~~~~~e-----------~l~iL~eeG~~~~~vvi~H~~~~~d~~ 248 (360)
T 3tn4_A 198 AARAQKETGAVIITHTQEGTMGPE-----------QAAYLLEHGADPKKIVIGHMCDNTDPD 248 (360)
T ss_dssp HHHHHHHHCCEEEEECSTTCCHHH-----------HHHHHHHTTCCGGGEEECCGGGCCCHH
T ss_pred HHHHHHHhCCcEEEEcCcccCCHH-----------HHHHHHHcCCCCCceEEEcCCCCCCHH
Confidence 999999999999999866543222 356677888755688889954444333
No 72
>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3
Probab=98.16 E-value=1.7e-05 Score=67.63 Aligned_cols=150 Identities=11% Similarity=0.051 Sum_probs=73.4
Q ss_pred HHHHHHHHhcCcceeecCCCC----CHHHHHHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCC
Q 022028 128 LLCGIELIHSGVTCFAEAGGQ----HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHA 203 (304)
Q Consensus 128 ~~~~~~~l~~GvTtv~d~~~~----~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (304)
...+..+.+.|+|++++.+.. ..+...+.++..|++.+.+..+...+ ..|........++..+..++.++.....
T Consensus 36 ~~~~~~~~~~Gv~~iv~~~~~~~~~~~~~~~~~~~~~~~~v~~~~G~~~~~-~hP~~~~~~~~~~l~~~~~~~l~~gi~~ 114 (291)
T 1bf6_A 36 CQEMNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGINVVACTGYYQDA-FFPEHVATRSVQELAQEMVDEIEQGIDG 114 (291)
T ss_dssp HHHHHHHHHTTEEEEEECCCGGGTCCHHHHHHHHHHHCCEEEEEECCCCGG-GCCTHHHHSCHHHHHHHHHHHHHTCSTT
T ss_pred HHHHHHHHHcCCCEEEecCCCcCCCCHHHHHHHHHhcCCeEEEeeccccCc-cCcHhhhcCCHHHHHHHHHHHHHhccCC
Confidence 334556778999999887642 24556666677777665432221100 0111101111111112222222221000
Q ss_pred CCCCeEEEEeeCcc--cCCCH---HHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCee
Q 022028 204 ADGRIRIWFGIRQI--MNATD---RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLL 278 (304)
Q Consensus 204 ~~~~i~~~~~~~~~--~~~~~---e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~ 278 (304)
..-.+. .++-.+. +..++ +.+++..++|+++|+++.+|........+ .++.+.+.|+...+++
T Consensus 115 ~~~~~~-~iGe~gld~~~~~~~~~~~~~~~~~~a~~~~~pv~iH~~~~~~~~~-----------~~~~l~~~~~~~~~~~ 182 (291)
T 1bf6_A 115 TELKAG-IIAEIGTSEGKITPLEEKVFIAAALAHNQTGRPISTHTSFSTMGLE-----------QLALLQAHGVDLSRVT 182 (291)
T ss_dssp SSCCEE-EEEEEECBTTBCCHHHHHHHHHHHHHHHHHCCCEEEECGGGCSHHH-----------HHHHHHHTTCCGGGEE
T ss_pred cCccee-eEEEEecCCCCCCHHHHHHHHHHHHHHHHHCCeEEEeCCCCCChHH-----------HHHHHHHcCCCchhEE
Confidence 001111 1221111 12233 45888999999999999999842111111 4566666676444678
Q ss_pred EEEecc-CCcchh
Q 022028 279 SAHTVW-VNHTEV 290 (304)
Q Consensus 279 ~~H~~~-l~~~di 290 (304)
+.||.. .+.+.+
T Consensus 183 i~H~~~~~~~~~~ 195 (291)
T 1bf6_A 183 VGHCDLKDNLDNI 195 (291)
T ss_dssp ECCCCSSCCHHHH
T ss_pred EECCCCCCCHHHH
Confidence 889854 444443
No 73
>2z26_A Dihydroorotase, dhoase; TIM barrel, hydrolase; HET: KCX DOR NCD; 1.29A {Escherichia coli} PDB: 2z24_A* 2z25_A* 2eg6_A* 1xge_A* 2eg7_A* 2eg8_A* 2z27_A* 2e25_A* 2z28_A* 2z29_A* 3mjm_A* 2z2a_A* 1j79_A* 2z2b_A* 3ihn_A* 3jze_A*
Probab=98.06 E-value=1.9e-05 Score=69.42 Aligned_cols=25 Identities=4% Similarity=0.074 Sum_probs=21.6
Q ss_pred CCHHHHHHHHHHHHHhCCeeeEEec
Q 022028 220 ATDRLLLETRDMAREFKTGIHMHVA 244 (304)
Q Consensus 220 ~~~e~l~~~~~~a~~~~~~~~~H~~ 244 (304)
.+.+.+..+++.+++.+.++.+|+-
T Consensus 117 ~~~~~l~~~~~~~~~~~~~v~vH~e 141 (347)
T 2z26_A 117 TSVDAIMPVLERMEKIGMPLLVHGE 141 (347)
T ss_dssp SCGGGGHHHHHHHHHHTCCEEECCC
T ss_pred CCHHHHHHHHHHHHHhCCEEEEEec
Confidence 3667788899999999999999974
No 74
>3pnu_A Dihydroorotase; TIM barrel, zinc binding, hydrolase, structu genomics, center for structural genomics of infectious DISE csgid; HET: KCX; 2.40A {Campylobacter jejuni subsp}
Probab=98.06 E-value=3.3e-05 Score=68.04 Aligned_cols=69 Identities=10% Similarity=0.063 Sum_probs=41.4
Q ss_pred CHHHHHHHHHHHHHhCCeeeEEecCChhh--------HH---HHHHhc-CCC--------CCHHHHHHHhCCCCCCeeEE
Q 022028 221 TDRLLLETRDMAREFKTGIHMHVAEIPYE--------NQ---VVMDTR-KVD--------HGTVTFLDKIEFLQNNLLSA 280 (304)
Q Consensus 221 ~~e~l~~~~~~a~~~~~~~~~H~~E~~~~--------~~---~~~~~~-g~~--------~~~~~~l~~~g~l~~~~~~~ 280 (304)
+.+.+.++++.+++.|.++.+|+ |..+. .. ...+.+ |.. ...++.+++. +----.++.
T Consensus 134 ~~~~l~~~l~~~~~~g~~v~vHa-Ed~~~i~~~E~~ai~r~~~la~~~~g~~lhi~HvSt~~~v~~I~~A-~~VtaEv~p 211 (359)
T 3pnu_A 134 DIEYLKPTLEAMSDLNIPLLVHG-ETNDFVMDRESNFAKIYEKLAKHFPRLKIVMEHITTKTLCELLKDY-ENLYATITL 211 (359)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECC-CCSSCGGGTTGGGHHHHHHHHHHCTTSCEEECSCCSHHHHHHHHHC-TTEEEEECS
T ss_pred CHHHHHHHHHHHHHcCCEEEEec-CCchHhHHHHHHHHHHHHHHHHHcCCCcEEEEecCcHHHHHHHHhc-CCceEEEec
Confidence 77889999999999999999996 54321 11 111223 431 1245555554 100123467
Q ss_pred EeccCCcchhc
Q 022028 281 HTVWVNHTEVN 291 (304)
Q Consensus 281 H~~~l~~~di~ 291 (304)
|...|+++++.
T Consensus 212 hhL~lt~~~~~ 222 (359)
T 3pnu_A 212 HHLIITLDDVI 222 (359)
T ss_dssp GGGTCCHHHHH
T ss_pred hhhEEcHHHhc
Confidence 77888888764
No 75
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=97.74 E-value=0.00048 Score=58.08 Aligned_cols=137 Identities=7% Similarity=0.016 Sum_probs=69.6
Q ss_pred HHHHHhcCcceeecCCCC--CHHHHHHHHHHcCCeEEeecccccCCCCCCCCc-ccC-----ChHHHHHHHHHHHHHHcC
Q 022028 131 GIELIHSGVTCFAEAGGQ--HVSEMAKAVELLGLRACLVQSTMDCGEGLPASW-AVR-----TTDDCIQSQKELYAKHHH 202 (304)
Q Consensus 131 ~~~~l~~GvTtv~d~~~~--~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~ 202 (304)
+.++-.+||++++..+.. ..+.+.+.++..+.+.+.+..+ -|.+ ... ...+.++..++.+++...
T Consensus 26 l~~~~~~Gv~~~v~~~~~~~~~~~~~~l~~~~~~~i~~~~Gi-------hP~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 98 (272)
T 2y1h_A 26 LEKAKKANVVALVAVAEHSGEFEKIMQLSERYNGFVLPCLGV-------HPVQGLPPEDQRSVTLKDLDVALPIIENYKD 98 (272)
T ss_dssp HHHHHHTTEEEEEECCSSGGGHHHHHHHHHHTTTTEEEEECC-------CSBC-------CBCCHHHHHHHHHHHHHHGG
T ss_pred HHHHHHCCCCEEEEeCCCHHHHHHHHHHHHHCCCCEEEEEEE-------CCCccccccccccCCHHHHHHHHHHHHhCCC
Confidence 345678999998877532 2345566666666444332211 1111 110 112334455555544321
Q ss_pred CCCCCeEEEEeeCccc-------CCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCC
Q 022028 203 AADGRIRIWFGIRQIM-------NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQN 275 (304)
Q Consensus 203 ~~~~~i~~~~~~~~~~-------~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~ 275 (304)
...+.--+++..+..+ ....+.++...++|+++++++.+|......+ .++.+.+.+. .
T Consensus 99 ~~~~iGE~Gld~~~~~~~~~~~~~~q~~~f~~~~~la~~~~lPv~iH~~~a~~~-------------~~~il~~~~~--~ 163 (272)
T 2y1h_A 99 RLLAIGEVGLDFSPRFAGTGEQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAGRP-------------TINLLQEQGA--E 163 (272)
T ss_dssp GCSEEEEEECCCCTTTCCSHHHHHHHHHHHHHHHHHHHHHTCCEEEECTTCHHH-------------HHHHHHHTTC--C
T ss_pred CEEEEEeccCCCccccCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCcHHH-------------HHHHHHhCCC--C
Confidence 1111001223221011 1123468889999999999999998754332 3455666552 2
Q ss_pred CeeEEEeccCCcchh
Q 022028 276 NLLSAHTVWVNHTEV 290 (304)
Q Consensus 276 ~~~~~H~~~l~~~di 290 (304)
+.++ ||..-+.+..
T Consensus 164 ~~v~-H~~~g~~~~~ 177 (272)
T 2y1h_A 164 KVLL-HAFDGRPSVA 177 (272)
T ss_dssp SEEE-ETCCSCHHHH
T ss_pred CEEE-EccCCCHHHH
Confidence 4444 9876554333
No 76
>3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A*
Probab=97.70 E-value=0.00048 Score=60.59 Aligned_cols=144 Identities=13% Similarity=0.018 Sum_probs=86.7
Q ss_pred HHHHHHHhcCcceeecCCC----CCHHHHHHHHHHc---CCeEEeecccccCCCCC--CCCccc-CChHHHHHHHHHHHH
Q 022028 129 LCGIELIHSGVTCFAEAGG----QHVSEMAKAVELL---GLRACLVQSTMDCGEGL--PASWAV-RTTDDCIQSQKELYA 198 (304)
Q Consensus 129 ~~~~~~l~~GvTtv~d~~~----~~~~~~~~~~~~~---gir~~~~~~~~d~g~~~--~~~~~~-~~~~~~~~~~~~~~~ 198 (304)
.-+..+.+.|++|+++... .....+.+.+++. |++.+.+-.+.... .+ .+.|.. ...++..+...+.+.
T Consensus 53 ~el~~~~~~G~~tiVd~t~~~~GRd~~~l~~is~~t~~~Gv~Iv~~TG~y~~~-~~~~~~~~~~~~~~e~l~~~~~~ei~ 131 (363)
T 3ovg_A 53 KEFKEFIDRGGSTIVTMDPPNVGRDVLKTLEIANAVKNLGGNVIMSTGFHKAK-FYDKYSSWLAVVPTEEIVKMCVAEIE 131 (363)
T ss_dssp HHHHHHHHTTEEEEEECCCTTTTCCHHHHHHHHHHHGGGTCEEEEEEECCCGG-GSCTTTSHHHHSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCeEEEeCCCccCCCHHHHHHHHHhcccCCcEEEEeCCCCcCc-ccccCcHhhhcCCHHHHHHHHHHHHH
Confidence 3445566889999998653 3456667777776 99987664443211 11 123321 233444444444444
Q ss_pred HHcC-------------CCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHH
Q 022028 199 KHHH-------------AADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVT 265 (304)
Q Consensus 199 ~~~~-------------~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~ 265 (304)
...+ ...|.|+++++...+...-.+.+++..++|++.|+++.+|........+ .++
T Consensus 132 ~Gi~~~~~~gp~~~~t~ikaG~ikig~s~~~~t~~Q~~~f~aq~~~A~e~glPViiH~r~gr~a~d-----------~l~ 200 (363)
T 3ovg_A 132 EGMDEYNYNGPVVKRSKAKAGIIKAGTGYGAIDRLELKALEVAARTSILTGCPILVHTQLGTMALE-----------VAK 200 (363)
T ss_dssp TCCBTTTTSSSCCCBCSCCCCEEEEEEEETBEEHHHHHHHHHHHHHHHHHCCCEEEEEETTCSHHH-----------HHH
T ss_pred hcccccccccccccCCCccCCEEEEEeCCCCCCHHHHHHHHHHHHHHHHhCCEEEEeCCCCCCHHH-----------HHH
Confidence 4222 2346778777765443334446888899999999999999865322212 456
Q ss_pred HHHHhCCCCCCeeEEEecc
Q 022028 266 FLDKIEFLQNNLLSAHTVW 284 (304)
Q Consensus 266 ~l~~~g~l~~~~~~~H~~~ 284 (304)
.|++.|+--.+++..||..
T Consensus 201 iL~e~g~~~~~vvi~H~~~ 219 (363)
T 3ovg_A 201 HLIGFGANPDKIQISHLNK 219 (363)
T ss_dssp HHHHHTCCGGGEEEECGGG
T ss_pred HHHhcCCCCCcEEEEcCCC
Confidence 6777776434677788884
No 77
>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A*
Probab=97.68 E-value=0.00046 Score=60.25 Aligned_cols=182 Identities=16% Similarity=0.119 Sum_probs=96.3
Q ss_pred cccccCccchhhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC----CCHHHHHHH
Q 022028 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG----QHVSEMAKA 156 (304)
Q Consensus 81 G~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~----~~~~~~~~~ 156 (304)
|+..+|=|+.... .+...+.++. .|..++.+..+..-+..+.++|++++++... .....+.+.
T Consensus 32 G~t~~HEHl~~~~-~~~~~~~~~~------------~~~~~~~~~~~~~el~~a~~aGv~tiV~~~~~~~~r~~~~l~~l 98 (339)
T 3gtx_A 32 GATLPHEHVIFGY-PGYAGDVTLG------------PFDHAAALASCTETARALLARGIQTVVDATPNGCGRNPAFLREV 98 (339)
T ss_dssp CEEEEEEEEEECC-TTGGGGTTTS------------CCCHHHHHHHHHHHHHHHHHTTEEEEEECCCTTTTCCHHHHHHH
T ss_pred CCeeeccCeeccC-cccccCCCcc------------ccchHHHHHHHHHHHHHHHHhCCCeEEecCCCccCcCHHHHHHH
Confidence 8889999996421 1111111111 1234455666777788899999999998652 456777888
Q ss_pred HHHcCCeEEeecccccCC--CCCCCCcccCChHHHHHHHHHHHHH-H-cCCC-----CCCeEEEEeeCcccCCCHHHHHH
Q 022028 157 VELLGLRACLVQSTMDCG--EGLPASWAVRTTDDCIQSQKELYAK-H-HHAA-----DGRIRIWFGIRQIMNATDRLLLE 227 (304)
Q Consensus 157 ~~~~gir~~~~~~~~d~g--~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~-----~~~i~~~~~~~~~~~~~~e~l~~ 227 (304)
+++.|+..+.+..+.-.. ..+.+.+... ....+++..+++.. . ...+ .+.|.+++..+.+...-.+.+++
T Consensus 99 a~~~g~~i~~~tG~hp~~~~~~~~~~~~~~-~~~~~~~L~~~~~~e~~~gIg~tg~k~g~IEigld~~~~~~~q~~~f~a 177 (339)
T 3gtx_A 99 SEATGLQILCATGFYYEGGGATTYFKFRAS-LGDAESEIYEMMRTEVTEGIAGTGIRAGVIKLASSRDAITPYEQLFFRA 177 (339)
T ss_dssp HHHHCCEEECEECCCCTTTSSCHHHHHHHH-HSCHHHHHHHHHHHHHHTCSTTSSCCCSEEEEECCSSCCCHHHHHHHHH
T ss_pred HHHcCCcEEEEcCCCccCccCCcCCccccc-ccCCHHHHHHHHHHHHHhcccccCcccceEEEEcCCCCCCHHHHHHHHH
Confidence 888888775443221100 0000010000 00012222222221 1 1111 23345555544222222335777
Q ss_pred HHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEec-cCCc
Q 022028 228 TRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTV-WVNH 287 (304)
Q Consensus 228 ~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~-~l~~ 287 (304)
-.++|++.|+++.+|........+ .++.|++.|+-..++++.||. +-+.
T Consensus 178 q~~lA~~~glPViiH~~~gr~a~~-----------~~~iL~~~~~~~~~~vi~H~~~~~~~ 227 (339)
T 3gtx_A 178 AARVQRETGVPIITHTQEGQQGPQ-----------QAELLTSLGADPARIMIGHMDGNTDP 227 (339)
T ss_dssp HHHHHHHHCCCEEEECSTTCCHHH-----------HHHHHHHTTCCGGGEEECCGGGCCCH
T ss_pred HHHHHHHHCCeEEEeCCCCcCHHH-----------HHHHHHHcCCCcccEEEEccCCCCCH
Confidence 889999999999999844322222 356666766643466678997 4443
No 78
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=97.60 E-value=0.0016 Score=57.40 Aligned_cols=140 Identities=10% Similarity=0.024 Sum_probs=77.8
Q ss_pred HHHHHHHHHHhcCcceeecCC----CCCHHHHHHHHHHcCCeEEeecccccCCCCCCCCccc-CChHHHHHHHHHHHHHH
Q 022028 126 STLLCGIELIHSGVTCFAEAG----GQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAV-RTTDDCIQSQKELYAKH 200 (304)
Q Consensus 126 ~~~~~~~~~l~~GvTtv~d~~----~~~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~-~~~~~~~~~~~~~~~~~ 200 (304)
.+..-+.++.++|++++++.. +.....+.+.++..|++.+.+-.+.... +.|.+.. ...++..+...+.+...
T Consensus 87 ~~~~~l~~~~~aGv~tiV~~t~~g~gr~~~~l~~la~~~gv~i~~~tG~y~~~--~~P~~~~~~~~~~L~~~~~~ei~~G 164 (364)
T 3k2g_A 87 LAIAEVKQFAAVGGRSIVDPTCRGIGRDPVKLRRISAETGVQVVMGAGYYLAS--SMPETAARLSADDIADEIVAEALEG 164 (364)
T ss_dssp HHHHHHHHHHHTTCCEEEECCCBTTTCCHHHHHHHHHHHCCEEEECCSBCCGG--GCCGGGGTCCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhcCCCeEEEeCCCcccCCHHHHHHHHHHhCCcEEEEeCccCCC--CCchhhccCCHHHHHHHHHHHHHhc
Confidence 344566778899999999876 3466777888888998876543332111 1122221 12322222222222211
Q ss_pred c---CCCCCCeE-EEEeeCcccCCCHH---HHHHHHHHHHHhCCeeeEEec---CChhhHHHHHHhcCCCCCHHHHHHHh
Q 022028 201 H---HAADGRIR-IWFGIRQIMNATDR---LLLETRDMAREFKTGIHMHVA---EIPYENQVVMDTRKVDHGTVTFLDKI 270 (304)
Q Consensus 201 ~---~~~~~~i~-~~~~~~~~~~~~~e---~l~~~~~~a~~~~~~~~~H~~---E~~~~~~~~~~~~g~~~~~~~~l~~~ 270 (304)
. +...+.|+ +++.. ..++. .+++..++|++.|+++.+|.. +...+ .++.|++.
T Consensus 165 i~~~~vkag~IGEiGld~----~~t~~q~~~f~aq~~~A~~~glPV~iH~~gr~~a~~e-------------~l~iL~e~ 227 (364)
T 3k2g_A 165 TDGTDARIGLIGEIGVSS----DFTAEEEKSLRGAARAQVRTGLPLMVHLPGWFRLAHR-------------VLDLVEEE 227 (364)
T ss_dssp BTTBSCCCSSEEEEECCT----TCCHHHHHHHHHHHHHHHHHCCCEEEECCTTSCCHHH-------------HHHHHHHT
T ss_pred cccCCcceeEEEEEEcCC----CCCHHHHHHHHHHHHHHHHHCCeEEEecCCCCccHHH-------------HHHHHHHc
Confidence 1 11223342 33332 22333 578888999999999999972 22222 45666666
Q ss_pred CCCCCCeeEEEecc
Q 022028 271 EFLQNNLLSAHTVW 284 (304)
Q Consensus 271 g~l~~~~~~~H~~~ 284 (304)
|+--.++++.||..
T Consensus 228 g~~~~~vvi~H~~~ 241 (364)
T 3k2g_A 228 GADLRHTVLCHMNP 241 (364)
T ss_dssp TCCGGGEEECCCGG
T ss_pred CCCCCceEEECCCC
Confidence 66334566678883
No 79
>3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0
Probab=97.58 E-value=0.00028 Score=61.35 Aligned_cols=146 Identities=14% Similarity=0.131 Sum_probs=80.7
Q ss_pred HHHHHHHHHhcCcceeecCCC----CCHHHHHHHHHHcCCeEEeecccccCC---CCCC-------------CCccc-CC
Q 022028 127 TLLCGIELIHSGVTCFAEAGG----QHVSEMAKAVELLGLRACLVQSTMDCG---EGLP-------------ASWAV-RT 185 (304)
Q Consensus 127 ~~~~~~~~l~~GvTtv~d~~~----~~~~~~~~~~~~~gir~~~~~~~~d~g---~~~~-------------~~~~~-~~ 185 (304)
+..-+.++...|++|++|... .....+.+..++.|++.+.+-.+.... .++. +.|.. ..
T Consensus 48 ~~~el~~~~~~G~~tiVd~t~~~~gR~~~~l~~is~~tgv~iv~~TG~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (330)
T 3pnz_A 48 SQLDVQDFADLGGKTIVDATAVDYGRRVLDVAQISKETGIQIVGTAGFNKSFLWDGKIKPELKPIIGDFETYYEWIENTT 127 (330)
T ss_dssp HHHHHHHHHHTTCCEEEECCCGGGCBCHHHHHHHHHHHCCEEEEEEECCCGGGGGSBCCGGGHHHHCSCSBHHHHHHTSC
T ss_pred HHHHHHHHHHhCCCEEEECCCCccccCHHHHHHHHHHhCCEEEEeCCCCccccccccccccccccccccccCchhhccCC
Confidence 344566678899999999754 456778888899999997664443211 0000 12211 12
Q ss_pred hHHHHHHHHHHHHHHcCC---CCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCC
Q 022028 186 TDDCIQSQKELYAKHHHA---ADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHG 262 (304)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~ 262 (304)
.++..+...+.+...... ..|.|.+++..+.+...-.+.+++-.++|++.|+++.+|..+.....+
T Consensus 128 ~e~l~~~~~~ei~~Gi~~t~vkaGvIEiGld~~~~~~~q~~~f~aq~~~A~~~glPViiH~r~g~~a~~----------- 196 (330)
T 3pnz_A 128 TDKLTEFVVNEVENGLEGTPYKAGQVKFGTGYNMITPLEEKTIRAVARAHHETKAPIHSHTEAGTMALE----------- 196 (330)
T ss_dssp HHHHHHHHHHHHHTCSTTSSCCEEEEEEECBTTBCCHHHHHHHHHHHHHHHHHCCCEEEECGGGCCHHH-----------
T ss_pred HHHHHHHHHHHHHhhCCCcCcCcCeEEEEcCCCCCCHHHHHHHHHHHHHHHHHCCeEEEeCCCCcChHH-----------
Confidence 233323333333332221 123344444433222222346788899999999999999865322121
Q ss_pred HHHHHHHhCCCCCCeeEEEec
Q 022028 263 TVTFLDKIEFLQNNLLSAHTV 283 (304)
Q Consensus 263 ~~~~l~~~g~l~~~~~~~H~~ 283 (304)
.++.|++.|+-..++++.||.
T Consensus 197 ~l~iL~e~~~~~~~vvi~H~~ 217 (330)
T 3pnz_A 197 QIEILKQENIPLEYLSIGHMD 217 (330)
T ss_dssp HHHHHHHTTCCGGGEEETTGG
T ss_pred HHHHHHHcCCCCCeEEEecCC
Confidence 245566666533455666886
No 80
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=97.52 E-value=0.00078 Score=56.33 Aligned_cols=131 Identities=11% Similarity=0.092 Sum_probs=65.1
Q ss_pred HHHHHhcCcceeecCCCC--CHHHHHHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCe
Q 022028 131 GIELIHSGVTCFAEAGGQ--HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRI 208 (304)
Q Consensus 131 ~~~~l~~GvTtv~d~~~~--~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 208 (304)
+.++.++||++++..+.. ....+.+.+++.+ ..+.+. | +-|.+.....+..+++.+++++... ...+
T Consensus 25 l~~~~~~Gv~~~v~~~~~~~~~~~~~~l~~~~~-~~~~~~-----G--~hP~~~~~~~~~~~~~l~~~~~~~~---~~~~ 93 (259)
T 1zzm_A 25 LQRAAQAGVGKIIVPATEAENFARVLALAENYQ-PLYAAL-----G--LHPGMLEKHSDVSLEQLQQALERRP---AKVV 93 (259)
T ss_dssp HHHHHHTTEEEEEEECCSGGGHHHHHHHHHHCT-TEEEEE-----C--CCGGGGGGCCHHHHHHHHHHHHHCC---SSEE
T ss_pred HHHHHHcCCCEEEEecCCHHHHHHHHHHHHhCC-CeEEEE-----E--ecccccccCCHHHHHHHHHHHhcCC---CCEE
Confidence 345778999998766432 2344455555544 222221 1 1121111112234445555554311 1111
Q ss_pred E---EEEeeCcc---cCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEe
Q 022028 209 R---IWFGIRQI---MNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHT 282 (304)
Q Consensus 209 ~---~~~~~~~~---~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~ 282 (304)
. +++..+.. .....+.++...++|+++++++.+|......+ .++.+++.+. ..+ .+.||
T Consensus 94 ~iGEiGld~~~~~~~~~~q~~~f~~~~~~a~~~~~Pv~iH~~~a~~~-------------~~~il~~~~~-~~~-~i~H~ 158 (259)
T 1zzm_A 94 AVGEIGLDLFGDDPQFERQQWLLDEQLKLAKRYDLPVILHSRRTHDK-------------LAMHLKRHDL-PRT-GVVHG 158 (259)
T ss_dssp EEEEEEEECCSSCCCHHHHHHHHHHHHHHHHHTTCCEEEEEESCHHH-------------HHHHHHHHCC-TTC-EEETT
T ss_pred EEEEeccCCCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEecccHHH-------------HHHHHHhcCC-CCC-EEEEc
Confidence 1 22332111 11123468888999999999999999765432 3455555553 123 34487
Q ss_pred ccCCc
Q 022028 283 VWVNH 287 (304)
Q Consensus 283 ~~l~~ 287 (304)
..-+.
T Consensus 159 ~~g~~ 163 (259)
T 1zzm_A 159 FSGSL 163 (259)
T ss_dssp CCSCH
T ss_pred CCCCH
Confidence 65543
No 81
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=97.30 E-value=0.0002 Score=60.14 Aligned_cols=53 Identities=15% Similarity=0.130 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcch
Q 022028 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTE 289 (304)
Q Consensus 223 e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~d 289 (304)
+.++...++|+++++++.+|..+...+ .++.+++.+.-..+. +.||..-+.+.
T Consensus 112 ~~f~~~l~~a~~~~lpv~iH~~~a~~~-------------~~~il~~~~~~~~~~-v~H~~~g~~~~ 164 (264)
T 1xwy_A 112 RAFVAQLRIAADLNMPVFMHCRDAHER-------------FMTLLEPWLDKLPGA-VLHCFTGTREE 164 (264)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEESCHHH-------------HHHHHGGGGGGSSCE-EECSCCCCHHH
T ss_pred HHHHHHHHHHHHhCCcEEEEcCCchHH-------------HHHHHHhcCCCCCcE-EEEccCCCHHH
Confidence 458889999999999999998755332 345555554312243 44876544433
No 82
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=97.27 E-value=0.0013 Score=56.08 Aligned_cols=56 Identities=9% Similarity=0.104 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc
Q 022028 222 DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN 291 (304)
Q Consensus 222 ~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~ 291 (304)
.+.+++.+++|+++++++.+|.-+...+ .++.+++.+.-..+ .+.||..-+.++..
T Consensus 113 ~~~F~~ql~lA~e~~lPv~iH~r~a~~~-------------~l~il~~~~~~~~~-~V~H~fsG~~e~a~ 168 (287)
T 3rcm_A 113 EKALEAQLTLAAQLRLPVFLHERDASER-------------LLAILKDYRDHLTG-AVVHCFTGEREALF 168 (287)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEESCHHH-------------HHHHHHTTGGGCSC-EEECSCCCCHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCcHHH-------------HHHHHHHcCCCCCe-EEEEeCCCCHHHHH
Confidence 5578889999999999999999876543 34444444331123 34587665554443
No 83
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=97.26 E-value=0.0062 Score=53.85 Aligned_cols=155 Identities=14% Similarity=0.066 Sum_probs=89.2
Q ss_pred CChHHHHHHHHHHHHHHHhcCcceeec---------CCCCCHH--------HHHHHHHHcCCeEEeecccccCCCCCCCC
Q 022028 118 MTEEDSYISTLLCGIELIHSGVTCFAE---------AGGQHVS--------EMAKAVELLGLRACLVQSTMDCGEGLPAS 180 (304)
Q Consensus 118 ~~~e~~~~~~~~~~~~~l~~GvTtv~d---------~~~~~~~--------~~~~~~~~~gir~~~~~~~~d~g~~~~~~ 180 (304)
.++++++..+...+.++.+.||..+-- ..+...+ .+.++.++.|+..-+-..++-.
T Consensus 89 ~t~ed~~r~a~e~~ed~a~dgV~Y~Eirf~P~~~~~~~Gl~~~~vv~av~~g~~~a~~~~gi~~rlI~~~~R~------- 161 (380)
T 4gxw_A 89 TRPDDLRRIAYEYLEDAAAHNVRHAEFFWNPTGTVRVSGIPYADAQAAIVTGMRDAARDFGIGARLIPSIDRE------- 161 (380)
T ss_dssp CSHHHHHHHHHHHHHHHHTTTEEEEEEEECHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEETT-------
T ss_pred CCHHHHHHHHHHHHHHHHHCCCeEEEEEcCHHHhccccCCCHHHHHHHHHHHHHHHHHhcCCcEEEEEeecCC-------
Confidence 467888888888899999999998621 1111111 2334445667765433222211
Q ss_pred cccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCC
Q 022028 181 WAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVD 260 (304)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~ 260 (304)
..++... +..++...+.. ++.+.+.++- .....+++.+..+++.|++.|+++.+|+.|.....+.+.+
T Consensus 162 ---~~~e~a~-~~~~~a~~~~~--~~VvG~dL~g-~E~~~p~~~f~~~f~~ar~~Gl~~t~HAGE~~~p~~~i~~----- 229 (380)
T 4gxw_A 162 ---QDPDEAV-AIVDWMKANRA--DEVAGIGIDY-RENDRPPELFWKAYRDARAAGFRTTAHAGEFGMPWRNVET----- 229 (380)
T ss_dssp ---SCHHHHH-HHHHHHHHTCC--TTBCEEEEES-CCTTCCGGGGHHHHHHHHHTTCEEEEEESCTTCCHHHHHH-----
T ss_pred ---CCHHHHH-HHHHHHHHhCC--CCEEEEeecC-CCCCCCHHHHHHHHHHHHHcCCCeeeeccccCCchHHHHH-----
Confidence 1223332 23334444332 3444444442 1234456678889999999999999999997532222211
Q ss_pred CCHHHHHHHhCCCCCCeeEEEeccCCcchh--c-----------ccccccccc
Q 022028 261 HGTVTFLDKIEFLQNNLLSAHTVWVNHTEV--N-----------CTFGNFKYA 300 (304)
Q Consensus 261 ~~~~~~l~~~g~l~~~~~~~H~~~l~~~di--~-----------~p~sN~~l~ 300 (304)
-++ +|+.+ =+.|++.+.+++- + ||.||..++
T Consensus 230 -----al~---~lga~-RIgHG~~~~~d~~L~~~l~~~~I~lEvCP~SN~~l~ 273 (380)
T 4gxw_A 230 -----AVD---LLHVD-RVDHGYTIVDNPELCARYAERGIVFTVVPTNSYYLR 273 (380)
T ss_dssp -----HHH---TSCCS-EEEECGGGGGCHHHHHHHHHHTCEEEECTTCHHHHH
T ss_pred -----HHH---HcCCc-ccccceeeccChHHHHHHHHhCceeEECCcchhhhc
Confidence 122 23322 3889999965432 1 999998775
No 84
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=97.06 E-value=0.0013 Score=56.84 Aligned_cols=55 Identities=7% Similarity=-0.058 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHH-hCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc
Q 022028 223 RLLLETRDMARE-FKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN 291 (304)
Q Consensus 223 e~l~~~~~~a~~-~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~ 291 (304)
+.+++-+++|++ +++++.+|.-+...+ .++.|++.+.-..+ .+.||..-+.++..
T Consensus 154 ~~F~~ql~lA~e~~~lPviiH~r~A~~d-------------~l~iL~~~~~~~~~-gViH~FsGs~e~a~ 209 (325)
T 3ipw_A 154 SGYRTLSILHQKYPYLPFFFHCRKSWSD-------------LCQLNKELGYNGCK-GVVHCFDGTEEEMN 209 (325)
T ss_dssp HHHHHTHHHHHHCTTCCEEEEEESCHHH-------------HHHHHHHTTCTTSC-EEECSCCCCHHHHH
T ss_pred HHHHHHHHHHHHhhCCeEEEEeCchHHH-------------HHHHHHhcCCCCCc-EEEEECCCCHHHHH
Confidence 467788999999 999999999776543 45556555432223 45598877766655
No 85
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=96.87 E-value=0.012 Score=50.01 Aligned_cols=156 Identities=10% Similarity=0.009 Sum_probs=80.3
Q ss_pred eeccccccCccchhhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCCC----CCHHHH
Q 022028 78 LLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG----QHVSEM 153 (304)
Q Consensus 78 v~PG~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~----~~~~~~ 153 (304)
+=|++||+|+|++... +.|.....+......+.+++. ..+-..||...+-... ...+.+
T Consensus 23 ~p~~~iDtH~Hl~~~~----------~p~~~~~~~~p~~~~~~e~~l-------~~~~~~GV~~~V~v~~~~~~~~n~~~ 85 (294)
T 4i6k_A 23 MKMNCIDTHAHVFSTQ----------DHSIETARYAPDYEATVQSFI-------SHLDEHNFTHGVLVQPSFLGTNNQAM 85 (294)
T ss_dssp --CCSEEEEECCBCTT----------SCCCTTCSCCCCSCBCHHHHH-------HHHHHTTCCEEEEECCGGGTTCCHHH
T ss_pred CCCCceEeeeEeecCC----------CCCCCCCCCCCCCCCCHHHHH-------HHHHHcCCCeEEEecCcccccchHHH
Confidence 4457899999997521 223332222111123444433 3355678887754432 222445
Q ss_pred HHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcc--cCCCHHHHHHHHHH
Q 022028 154 AKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQI--MNATDRLLLETRDM 231 (304)
Q Consensus 154 ~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~e~l~~~~~~ 231 (304)
.+.+++..-|.+... . +.+.. .. +.++++... +...+.+.+... .....+.++...++
T Consensus 86 ~~~~~~~p~r~~g~~-~------v~P~~----~~-------~eL~~l~~~--gv~Gi~l~~~~~~~~~~~~~~~~~~~~~ 145 (294)
T 4i6k_A 86 LNAIQQYPDRLKGIA-V------VQHTT----TF-------NELVNLKAQ--GIVGVRLNLFGLNLPALNTPDWQKFLRN 145 (294)
T ss_dssp HHHHHHSTTTEEEEE-C------CCTTC----CH-------HHHHHHHTT--TEEEEEEECTTSCCCCSSSHHHHHHHHH
T ss_pred HHHHHHCCCeEEEEE-E------eCCcc----cH-------HHHHHHHHC--CCcEEEeccCCCCCCCcccHHHHHHHHH
Confidence 666666644442111 1 11211 11 223333332 444555554322 23456788999999
Q ss_pred HHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccC
Q 022028 232 AREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV 285 (304)
Q Consensus 232 a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l 285 (304)
|+++|+++.+|+.... ... ..+.+++.+ + ++++.|+...
T Consensus 146 a~~~glpv~iH~~~~~--l~~----------~~~~l~~~p-~--~~Vi~H~g~p 184 (294)
T 4i6k_A 146 VESLNWQVELHAPPKY--LVQ----------LLPQLNEYS-F--DVVIDHFGRV 184 (294)
T ss_dssp HHHTTCEEEEECCHHH--HHH----------HHHHHTTSS-S--CEEESGGGCC
T ss_pred HHHcCCEEEEeeCcch--HHH----------HHHHHHHCC-C--CEEEECCCCC
Confidence 9999999999986321 111 234444555 2 5667777664
No 86
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=96.82 E-value=0.034 Score=46.44 Aligned_cols=53 Identities=13% Similarity=0.219 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEe
Q 022028 222 DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHT 282 (304)
Q Consensus 222 ~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~ 282 (304)
.+.+++..++|+++++++.+|.-... ..+...+ .++.+++.|.-..+.++.||
T Consensus 109 ~~~f~~ql~lA~e~~lPv~iH~r~~~-~~~a~~~-------~~~il~~~~~~~~~~vi~H~ 161 (261)
T 3guw_A 109 IEVLKSQLELAKRMDVPCIIHTPRGN-KLKATRK-------TLEILESLDFPADLAVIDHV 161 (261)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCSSS-TTHHHHH-------HHHHHHHTTCCTTSEEEESC
T ss_pred HHHHHHHHHHHHHhCCeEEEEcCCCc-ccchHHH-------HHHHHHHcCCCCCCEEEEeC
Confidence 34688899999999999999986431 0111111 56777777664345667899
No 87
>3lgd_A Adenosine deaminase CECR1; TIM barrel, dimerization and receptor binding domains, glyco hydrolase, growth factor, secreted; HET: NAG; 2.00A {Homo sapiens} PDB: 3lgg_A*
Probab=96.82 E-value=0.0057 Score=56.02 Aligned_cols=71 Identities=11% Similarity=0.073 Sum_probs=45.7
Q ss_pred CCHHHHHHHHHH--HHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCc--chhc----
Q 022028 220 ATDRLLLETRDM--AREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH--TEVN---- 291 (304)
Q Consensus 220 ~~~e~l~~~~~~--a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~--~di~---- 291 (304)
.+++.+..+++. |++.|+++.+|+.|+... |.. +.+.+.+.-.|+.+ -+.||+++.+ +.++
T Consensus 306 ~p~~~f~~~f~~~~A~~~gl~~t~HAGE~~~~--------g~~--~~~~i~~Al~Lga~-RIgHGv~l~~dp~l~~~l~~ 374 (508)
T 3lgd_A 306 HSLHDYKEALMIPAKDGVKLPYFFHAGETDWQ--------GTS--IDRNILDALMLNTT-RIGHGFALSKHPAVRTYSWK 374 (508)
T ss_dssp CCTGGGHHHHTHHHHTTCCCCBCCEECCSSCC--------SST--TTTHHHHHHHTTCS-SEEECTTGGGCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCceeeecccccCC--------CCC--cHHHHHHHHhcCCc-eeeeeEecCccHHHHHHHHh
Confidence 356667778887 788999999999998531 100 11111111124443 3799999974 3333
Q ss_pred -------cccccccccc
Q 022028 292 -------CTFGNFKYAV 301 (304)
Q Consensus 292 -------~p~sN~~l~~ 301 (304)
||.||.+++.
T Consensus 375 ~~I~levCP~SN~~l~~ 391 (508)
T 3lgd_A 375 KDIPIEVCPISNQVLKL 391 (508)
T ss_dssp TTCCEEECHHHHHHTTS
T ss_pred cCCeEEECcchHHHhCC
Confidence 9999999974
No 88
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}
Probab=96.74 E-value=0.0043 Score=54.62 Aligned_cols=141 Identities=12% Similarity=0.072 Sum_probs=74.9
Q ss_pred HHHHHHHHHhcCcceeecCC-----CCCHHHHHHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHc
Q 022028 127 TLLCGIELIHSGVTCFAEAG-----GQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHH 201 (304)
Q Consensus 127 ~~~~~~~~l~~GvTtv~d~~-----~~~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (304)
+..-+.++..+|++|+++.. +.....+.+.+++.|+..+.+..+.... +.|.+.....++..+...+.+....
T Consensus 77 ~~~el~~~~~aGv~tiV~~~g~~g~~r~~~~l~~la~~~gi~i~~~tG~y~~~--~~P~~~~~~~~~L~~~~~~ei~~gi 154 (365)
T 3rhg_A 77 VIFELNNFKELGGKTIVDATGSSSIGRDIRKLKQVAELTGINVVASSGLYIEK--FEGKRLADDIDAMAKMIDDELNIGI 154 (365)
T ss_dssp HHHHHHHHHHTTEEEEEECCCSGGGTCCHHHHHHHHHHHCCEEECEECCCCHH--HHGGGGGSCHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHhcCCCeEEEcCCCCCCCCCHHHHHHHHHHHCCcEEEEeCccCCC--CCchhhcCCHHHHHHHHHHHHHhcc
Confidence 33456778899999999887 2456777788888998876543322100 0022221122222222222222111
Q ss_pred C---CCCCCeEEEEeeCcccCCCHH---HHHHHHHHHHHh-CCeeeEEe-cCChhhHHHHHHhcCCCCCHHHHHHHh-CC
Q 022028 202 H---AADGRIRIWFGIRQIMNATDR---LLLETRDMAREF-KTGIHMHV-AEIPYENQVVMDTRKVDHGTVTFLDKI-EF 272 (304)
Q Consensus 202 ~---~~~~~i~~~~~~~~~~~~~~e---~l~~~~~~a~~~-~~~~~~H~-~E~~~~~~~~~~~~g~~~~~~~~l~~~-g~ 272 (304)
. ...+.|+ -++.. +..+++ .+++..++|++. |+++.+|. .......+ .++.|.+. |+
T Consensus 155 ~~t~vkag~IG-EiGld--~~~t~~q~~~f~aq~~~A~~~~glPV~iH~~r~~~a~~e-----------~l~iL~e~~~~ 220 (365)
T 3rhg_A 155 DGTDIRAGMIG-EIGVS--PFFTDGEKNSLRAAALAQNNNPYASMNIHMPGWQRRGDE-----------VLDILLTEMGC 220 (365)
T ss_dssp TTSSCCCCEEE-EEECC--TTCCHHHHHHHHHHHHHHTTCTTCEEEEECCTTSCCHHH-----------HHHHHTTTTCC
T ss_pred ccCCceeEEEE-EEEcC--CCCCHHHHHHHHHHHHHHHHhcCCcEEEECCCCCcCHHH-----------HHHHHHhccCC
Confidence 1 1112231 12222 123333 577788899999 99999997 42111111 45566655 65
Q ss_pred CCCCeeEEEec
Q 022028 273 LQNNLLSAHTV 283 (304)
Q Consensus 273 l~~~~~~~H~~ 283 (304)
--.++++.||.
T Consensus 221 ~~~~vvi~H~~ 231 (365)
T 3rhg_A 221 DPAKISLAHSD 231 (365)
T ss_dssp CGGGEEESCCG
T ss_pred CCCceEEecCC
Confidence 33456677888
No 89
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=96.62 E-value=0.0004 Score=58.59 Aligned_cols=56 Identities=13% Similarity=0.176 Sum_probs=37.0
Q ss_pred CHHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchh
Q 022028 221 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEV 290 (304)
Q Consensus 221 ~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di 290 (304)
..+.++...++|+++|+++.+|..+...+ .++.+++.+.-..+.++ ||..-+.+.+
T Consensus 118 q~~~f~~~~~~a~~~~lPv~iH~~~~~~~-------------~~~il~~~p~~~~~~I~-H~~~g~~~~~ 173 (268)
T 1j6o_A 118 QKRVFVEQIELAGKLNLPLVVHIRDAYSE-------------AYEILRTESLPEKRGVI-HAFSSDYEWA 173 (268)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEESCHHH-------------HHHHHHHSCCCSSCEEE-TTCCSCHHHH
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCchHHH-------------HHHHHHhcCCCCCCEEE-EcCCCCHHHH
Confidence 44568889999999999999998765433 34455555432234555 8766554443
No 90
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12
Probab=96.44 E-value=0.0026 Score=53.12 Aligned_cols=56 Identities=9% Similarity=0.179 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc
Q 022028 222 DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN 291 (304)
Q Consensus 222 ~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~ 291 (304)
.+.++...++|+++|+++.+|..+...+. ++.+++.+.-..+++ .||...+.+++.
T Consensus 110 ~~~~~~~~~~a~~~~~pv~iH~~~~~~~~-------------~~~l~~~~~p~~~~v-~H~~~~~~~~~~ 165 (265)
T 1yix_A 110 QESFIHHIQIGRELNKPVIVHTRDARADT-------------LAILREEKVTDCGGV-LHCFTEDRETAG 165 (265)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEESCHHHH-------------HHHHHHTTGGGTCEE-ETTCCSCHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEEecCchHHH-------------HHHHHhcCCCCCCEE-EEcCCCCHHHHH
Confidence 45688899999999999999998665433 334444333222433 377666555443
No 91
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=96.42 E-value=0.0016 Score=55.87 Aligned_cols=54 Identities=7% Similarity=0.004 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchh
Q 022028 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEV 290 (304)
Q Consensus 223 e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di 290 (304)
+.++...++|+++++++.+|..+...+ .++.+++.+. .....+.||..-+.+..
T Consensus 127 ~~f~~ql~lA~~~~lPv~iH~r~a~~~-------------~~~il~~~~~-~~~~~i~H~f~g~~~~~ 180 (301)
T 2xio_A 127 KYFEKQFELSEQTKLPMFLHCRNSHAE-------------FLDITKRNRD-RCVGGVVHSFDGTKEAA 180 (301)
T ss_dssp HHHHHTHHHHHHHCCCEEEEEESCHHH-------------HHHHHHHTGG-GSSCEEETTCCCCHHHH
T ss_pred HHHHHHHHHHHHhCCcEEEEecCchHH-------------HHHHHHhccC-CCCcEEEEccCCCHHHH
Confidence 567888999999999999998654433 3455554432 11235688865554443
No 92
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15
Probab=96.39 E-value=0.019 Score=48.48 Aligned_cols=52 Identities=13% Similarity=0.008 Sum_probs=36.2
Q ss_pred CCCHHHHHHHHHHHHHhCCeeeEEecCCh-hhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCC
Q 022028 219 NATDRLLLETRDMAREFKTGIHMHVAEIP-YENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN 286 (304)
Q Consensus 219 ~~~~e~l~~~~~~a~~~~~~~~~H~~E~~-~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~ 286 (304)
....+.++.+.++|+++|+++.+|..... .. ..+.+++.+ + ++++.||....
T Consensus 120 ~~~~~~~~~~~~~a~~~~lpv~iH~~~~~~~~-------------~~~~~~~~p-l--~~vi~H~g~~~ 172 (288)
T 2ffi_A 120 DLTGAQWRPLLERIGEQGWHVELHRQVADIPV-------------LVRALQPYG-L--DIVIDHFGRPD 172 (288)
T ss_dssp CTTSTTTHHHHHHHHHHTCEEEECSCTTTHHH-------------HHHHHTTTT-C--CEEESGGGSCC
T ss_pred CcccHHHHHHHHHHHHCCCeEEEeechhhHHH-------------HHHHHHHCC-C--CEEEECCCCCC
Confidence 34556788899999999999999987542 11 234455555 3 56777887765
No 93
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=95.61 E-value=0.011 Score=49.26 Aligned_cols=30 Identities=17% Similarity=0.237 Sum_probs=24.0
Q ss_pred CHHHHHHHHHHHHHhCCeeeEEecCChhhH
Q 022028 221 TDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (304)
Q Consensus 221 ~~e~l~~~~~~a~~~~~~~~~H~~E~~~~~ 250 (304)
..+.++...++|+++|+++.+|......+.
T Consensus 107 ~~~~~~~~~~~a~~~~~pv~iH~~~~~~~~ 136 (265)
T 2gzx_A 107 QKEVFRKQIALAKRLKLPIIIHNREATQDC 136 (265)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEESCHHHH
T ss_pred HHHHHHHHHHHHHHcCCcEEEEecccHHHH
Confidence 445688899999999999999997654433
No 94
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=95.47 E-value=0.0078 Score=50.16 Aligned_cols=55 Identities=13% Similarity=-0.011 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHhCCeee-EEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc
Q 022028 222 DRLLLETRDMAREFKTGIH-MHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN 291 (304)
Q Consensus 222 ~e~l~~~~~~a~~~~~~~~-~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~ 291 (304)
.+.+++.+++|+++++++. +|.-+...+ .++.+++.+.. ...+.||..-+.++..
T Consensus 103 ~~~F~~ql~lA~e~~lPviSiH~r~a~~~-------------~~~il~~~~~~--~~~v~H~fsG~~e~a~ 158 (254)
T 3gg7_A 103 FAVFQHILRRCEDHGGRILSIHSRRAESE-------------VLNCLEANPRS--GTPILHWYSGSVTELR 158 (254)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTCHHH-------------HHHHHHHCGGG--EEEEEETCCSCHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEcCCcHHH-------------HHHHHHHcCCC--CcEEEEeCCCCHHHHH
Confidence 3457888999999999998 998765433 45555555321 1246698877765554
No 95
>4d9a_A 2-pyrone-4,6-dicarbaxylate hydrolase; structural genomics, protein structure initiative; HET: 0GY; 1.35A {Sphingomonas paucimobilis} PDB: 4d95_A* 4di8_A* 4di9_A* 4d9d_A 4dia_A 2qah_A 4d8l_A
Probab=94.98 E-value=0.19 Score=42.84 Aligned_cols=158 Identities=14% Similarity=0.105 Sum_probs=82.3
Q ss_pred EeeccccccCccchhhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceeecCC----CCCHHH
Q 022028 77 ILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG----GQHVSE 152 (304)
Q Consensus 77 iv~PG~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~----~~~~~~ 152 (304)
.+=||.||+|.|++... .-+.|+...-+. ...++.+++... +-..||+..+-+. ...-+.
T Consensus 22 ~~p~~~iDaH~H~~~~~--------~~~p~~~~~~~~-~~~~~~e~l~~~-------m~~~GI~~~Vlvq~~~~~~dN~~ 85 (303)
T 4d9a_A 22 TPPPGAIDAHCHVFGPM--------AQFPFSPKAKYL-PRDAGPDMLFAL-------RDHLGFARNVIVQASCHGTDNAA 85 (303)
T ss_dssp CCCTTCEEEEECCBCCT--------TTSCCCTTCSCC-BCCBCHHHHHHH-------HHHHTCSEEEEECCGGGTTCCHH
T ss_pred CCCCCceEeeeEeecCc--------ccCCCCCCCCCc-CCCCCHHHHHHH-------HHHcCCCeEEEeccccccccHHH
Confidence 34568999999997521 122444322111 124566664433 3345776654322 122244
Q ss_pred HHHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcc--cCCCHHHHHHHHH
Q 022028 153 MAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQI--MNATDRLLLETRD 230 (304)
Q Consensus 153 ~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~e~l~~~~~ 230 (304)
+.+++.+.+-|.. +....+ +.. .. +.++++... |...+-+.+... .....+.++.+.+
T Consensus 86 ll~~l~~~~~r~~-Gva~vd------p~~----~~-------~eL~~l~~~--G~rGvR~~~~~~~~~~~~~~~~~~~~~ 145 (303)
T 4d9a_A 86 TLDAIARAQGKAR-GIAVVD------PAI----DE-------AELAALHEG--GMRGIRFNFLKRLVDDAPKDKFLEVAG 145 (303)
T ss_dssp HHHHHHHTTTSEE-EEECCC------TTC----CH-------HHHHHHHHT--TEEEEEEECCTTTCSCCCHHHHHHHHT
T ss_pred HHHHHHhCCCcEE-EEEEeC------CCC----CH-------HHHHHHHHC--CCCEEEeecccCCccccCHHHHHHHHH
Confidence 5665666655542 222222 111 11 122222221 333333443322 4567888999999
Q ss_pred HHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCC
Q 022028 231 MAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN 286 (304)
Q Consensus 231 ~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~ 286 (304)
.+.+ |..+.+|+.... ... ..+.+.+.++ ++++.|+....
T Consensus 146 ~l~~-gl~v~l~~~~~~--l~~----------l~~~~~~~~~---~iVidH~G~p~ 185 (303)
T 4d9a_A 146 RLPA-GWHVVIYFEADI--LEE----------LRPFMDAIPV---PIVIDHMGRPD 185 (303)
T ss_dssp SCCT-TCEEEEECCGGG--HHH----------HHHHHHHCSS---CEEEGGGGCCC
T ss_pred HHhc-CCEEEEeccccc--HHH----------HHHHHHHCCC---cEEEeCCCCCC
Confidence 9999 999999985321 111 2344455433 78889988764
No 96
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=94.93 E-value=0.072 Score=45.65 Aligned_cols=28 Identities=4% Similarity=-0.145 Sum_probs=23.6
Q ss_pred CCCHHHHHHHHHHHHHhCCeeeEEecCC
Q 022028 219 NATDRLLLETRDMAREFKTGIHMHVAEI 246 (304)
Q Consensus 219 ~~~~e~l~~~~~~a~~~~~~~~~H~~E~ 246 (304)
....+.++.+.++|+++|+++.+|....
T Consensus 141 ~~~~~~~~~~~~~a~~~~lpv~iH~~~~ 168 (327)
T 2dvt_A 141 YYDLPQYRPFWGEVEKLDVPFYLHPRNP 168 (327)
T ss_dssp CTTSGGGHHHHHHHHHHTCCEEEECCCC
T ss_pred CCCCcchHHHHHHHHHcCCeEEECCCCC
Confidence 4566778999999999999999998644
No 97
>4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A
Probab=94.85 E-value=0.098 Score=44.56 Aligned_cols=51 Identities=12% Similarity=-0.020 Sum_probs=33.6
Q ss_pred CHHHHHHHHHHHHHhCCeeeEEecCCh-hhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCC
Q 022028 221 TDRLLLETRDMAREFKTGIHMHVAEIP-YENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN 286 (304)
Q Consensus 221 ~~e~l~~~~~~a~~~~~~~~~H~~E~~-~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~ 286 (304)
..+.+....+.++++|+++.+|+.... .+ ..+.+.+.. +-++++.|+....
T Consensus 120 ~~~~~~~~~~~~~~~glpv~ih~~~~~l~~-------------l~~ll~~~P--~l~iVi~H~G~p~ 171 (303)
T 4do7_A 120 DDADFARGVAWLQANDYVYDVLVFERQLPD-------------VQAFCARHD--AHWLVLDHAGKPA 171 (303)
T ss_dssp HCHHHHHHHHHHHHTTCEEEECCCGGGHHH-------------HHHHHHHCC--SSCEEEGGGGCCC
T ss_pred cCHHHHHHHHHHHHCCCeEEEecCHHHHHH-------------HHHHHHHCC--CCCEEEeCCCCCC
Confidence 345678899999999999999986542 22 233444442 1167777877754
No 98
>2a3l_A AMP deaminase, AMPD; atampd, AT2G38280, adenosine 5'-monophosphate deaminase, COF 5'-phosphate, structural genomics; HET: CF5; 3.34A {Arabidopsis thaliana} SCOP: c.1.9.1
Probab=93.96 E-value=0.006 Score=57.88 Aligned_cols=56 Identities=20% Similarity=0.193 Sum_probs=38.6
Q ss_pred HHHHHH-hCC---eeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchh--c-----------
Q 022028 229 RDMARE-FKT---GIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEV--N----------- 291 (304)
Q Consensus 229 ~~~a~~-~~~---~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di--~----------- 291 (304)
+..+++ .|+ ++++|++|+.. ++++.+. +|+++. ++||+++.+++. +
T Consensus 504 Ln~ar~~~Gl~~i~~t~HaGE~~~---------------~e~l~~a-lLg~~R-IgHGv~l~edp~Li~lla~~~I~vev 566 (701)
T 2a3l_A 504 LNKLRESKGMTTITLRPHSGEAGD---------------IDHLAAT-FLTCHS-IAHGINLRKSPVLQYLYYLAQIGLAM 566 (701)
T ss_dssp HHHHHTTTTCCCCEECCCCSSSSC---------------THHHHHH-HHHCSS-CSCCGGGGGCHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHcCCCCCCcccccCCCCC---------------HHHHHHH-hcCCCe-EEEEeecccCHHHHHHHHHcCCcEEE
Confidence 345554 677 89999999853 2222222 366665 699999998883 3
Q ss_pred cccccccccc
Q 022028 292 CTFGNFKYAV 301 (304)
Q Consensus 292 ~p~sN~~l~~ 301 (304)
||.||..++.
T Consensus 567 CP~SN~kl~~ 576 (701)
T 2a3l_A 567 SPLSNNSLFL 576 (701)
T ss_dssp CHHHHTTTTC
T ss_pred Cccchhhhcc
Confidence 9999997754
No 99
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=93.64 E-value=2.1 Score=35.92 Aligned_cols=99 Identities=15% Similarity=0.077 Sum_probs=54.7
Q ss_pred HHHHHhcCcceeecCCC-------CCHHHHHHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCC
Q 022028 131 GIELIHSGVTCFAEAGG-------QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHA 203 (304)
Q Consensus 131 ~~~~l~~GvTtv~d~~~-------~~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (304)
+..+-..||...+-+.. ..-+.+.+.+++..-|.+.... +.+. ..++.+++.++ ++..
T Consensus 53 l~~md~~GV~~~V~~~~~~~~~~~~~N~~~~~~~~~~p~r~~~~~~-------v~p~----~~~~a~~eL~~-~~~~--- 117 (291)
T 3irs_A 53 FEEMAAAGIEQGVCVGRNSSVLGSVSNADVAAVAKAYPDKFHPVGS-------IEAA----TRKEAMAQMQE-ILDL--- 117 (291)
T ss_dssp HHHHHHTTCCEEEEECCEETTTEECCHHHHHHHHHHSTTTEEEEEE-------CCCS----SHHHHHHHHHH-HHHT---
T ss_pred HHHHHHCCCCEEEEcCCCccccccccHHHHHHHHHHCCCcEEEEEe-------cCcc----CHHHHHHHHHH-HHhC---
Confidence 45566788877654321 2345566666666544421111 1121 12334444444 3321
Q ss_pred CCCCeEEEEeeCc---ccCCCHHHHHHHHHHHHHhCCeeeEEecCC
Q 022028 204 ADGRIRIWFGIRQ---IMNATDRLLLETRDMAREFKTGIHMHVAEI 246 (304)
Q Consensus 204 ~~~~i~~~~~~~~---~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~ 246 (304)
+...+.+.+.. .....++.+..+.++|.++|+++.+|....
T Consensus 118 --g~~Gi~~~~~~~~~~~~~~d~~~~~~~~~a~e~glpv~iH~~~~ 161 (291)
T 3irs_A 118 --GIRIVNLEPGVWATPMHVDDRRLYPLYAFCEDNGIPVIMMTGGN 161 (291)
T ss_dssp --TCCCEEECGGGSSSCCCTTCGGGHHHHHHHHHTTCCEEEECSSS
T ss_pred --CCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHcCCeEEEeCCCC
Confidence 33334444321 233456778899999999999999998764
No 100
>3e2v_A 3'-5'-exonuclease; structural genomics, hydrolase, PSI-2, protein initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.50A {Saccharomyces cerevisiae}
Probab=92.71 E-value=0.94 Score=40.05 Aligned_cols=27 Identities=7% Similarity=0.012 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHh----CCeeeEEecCChhhH
Q 022028 224 LLLETRDMAREF----KTGIHMHVAEIPYEN 250 (304)
Q Consensus 224 ~l~~~~~~a~~~----~~~~~~H~~E~~~~~ 250 (304)
.+++-+++|+++ ++++.+|.-+...+.
T Consensus 180 ~F~~QL~LA~e~~~~~~lPv~IH~R~A~~d~ 210 (401)
T 3e2v_A 180 FFEEQLKISCLNDKLSSYPLFLHMRSACDDF 210 (401)
T ss_dssp HHHHHHHHTTSSHHHHTSCEEEEEESCHHHH
T ss_pred HHHHHHHHHHhhhccCCCeEEEEecchHHHH
Confidence 466778899999 999999997765543
No 101
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=91.55 E-value=0.58 Score=39.46 Aligned_cols=28 Identities=11% Similarity=0.001 Sum_probs=23.5
Q ss_pred CCHHHHHHHHHHHHHhCCeeeEEecCCh
Q 022028 220 ATDRLLLETRDMAREFKTGIHMHVAEIP 247 (304)
Q Consensus 220 ~~~e~l~~~~~~a~~~~~~~~~H~~E~~ 247 (304)
..++.++.+.++|+++++++.+|.....
T Consensus 132 ~~~~~~~~~~~~a~~~~lpv~iH~~~~~ 159 (307)
T 2f6k_A 132 FGSPVLERVYQELDARQAIVALHPNEPA 159 (307)
T ss_dssp TTCGGGHHHHHHHHTTTCEEEEECCCCS
T ss_pred CCcHhHHHHHHHHHHcCCeEEECCCCCc
Confidence 4556788999999999999999987543
No 102
>3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824}
Probab=87.41 E-value=1.9 Score=35.60 Aligned_cols=25 Identities=12% Similarity=0.024 Sum_probs=21.8
Q ss_pred CHHHHHHHHHHHHHh-CCeeeEEecC
Q 022028 221 TDRLLLETRDMAREF-KTGIHMHVAE 245 (304)
Q Consensus 221 ~~e~l~~~~~~a~~~-~~~~~~H~~E 245 (304)
..+.++.+.++|+++ |+++.+|...
T Consensus 128 ~~~~~~~~~~~a~~~~~lpv~iH~~~ 153 (272)
T 3cjp_A 128 QIKSLKPIFKYSMDSGSLPIWIHAFN 153 (272)
T ss_dssp CGGGGHHHHHHHHHTTCCCEEECCST
T ss_pred ccHHHHHHHHHHHhccCCcEEEeCCC
Confidence 556788999999999 9999999864
No 103
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=86.00 E-value=0.88 Score=39.36 Aligned_cols=28 Identities=21% Similarity=0.228 Sum_probs=23.0
Q ss_pred CCHHHHHHHHHHHHHhCCeeeEEecCCh
Q 022028 220 ATDRLLLETRDMAREFKTGIHMHVAEIP 247 (304)
Q Consensus 220 ~~~e~l~~~~~~a~~~~~~~~~H~~E~~ 247 (304)
..++.++.+.++|.++|+++.+|.....
T Consensus 156 l~d~~~~p~~~~a~e~~lpv~iH~~~~~ 183 (350)
T 2gwg_A 156 LTDRIWYPIYEKMVELEIPAMIHVSTSC 183 (350)
T ss_dssp TTSGGGHHHHHHHHHHTCCEEECCCC--
T ss_pred CCCHHHHHHHHHHHHcCCeEEECCCCCC
Confidence 5667788999999999999999987653
No 104
>1nfg_A D-hydantoinase; TIM barrel, hydrolase; HET: KCX; 2.70A {Ralstonia pickettii} SCOP: b.92.1.3 c.1.9.6
Probab=82.91 E-value=0.85 Score=40.81 Aligned_cols=63 Identities=10% Similarity=0.040 Sum_probs=42.1
Q ss_pred cCCCHHHHHHHHHHHHHhCCeeeE-EecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhcc
Q 022028 218 MNATDRLLLETRDMAREFKTGIHM-HVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVNC 292 (304)
Q Consensus 218 ~~~~~e~l~~~~~~a~~~~~~~~~-H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~~ 292 (304)
..+..+.++++.++|++.|+++++ |+. +..+.+ .++.+++.|+----.++.||.+++++++..
T Consensus 212 ~~~~~~~~~~~~~~a~~~g~~~~~~H~~-~~~~~~-----------~~~~~~~~G~~v~~~~~~h~~~~~~~~~~~ 275 (457)
T 1nfg_A 212 PRVEAEATARALALAEIVNAPIYIVHVT-CEESLE-----------EVMRAKSRGVRALAETCTHYLYLTKEDLER 275 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEECCCC-SHHHHH-----------HHHHHHHHTCCEEECEEGGGGTCCGGGGGC
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEEeCC-cHHHHH-----------HHHHHHHcCCeEEEEEchHHhEeCHHHhcc
Confidence 345667888999999999999887 876 333333 233344455410112579999999998853
No 105
>2hnh_A DNA polymerase III alpha subunit; DNA replication, nucleotidyltransferase, beta, PHP, transferase; HET: DNA; 2.30A {Escherichia coli} PDB: 2hqa_A*
Probab=70.79 E-value=9.2 Score=37.64 Aligned_cols=66 Identities=15% Similarity=0.149 Sum_probs=43.1
Q ss_pred eccccccCccchhhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceee--cCCCC-CHHHHHH
Q 022028 79 LPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFA--EAGGQ-HVSEMAK 155 (304)
Q Consensus 79 ~PG~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~--d~~~~-~~~~~~~ 155 (304)
|+.|||+|+|..+|.+.| ..+++++... +...|...+. |+... ......+
T Consensus 3 M~~~vdLH~HT~~S~lDG--------------------~~~~~elv~~-------A~~~Gl~alAITDH~~~~G~~~~~~ 55 (910)
T 2hnh_A 3 EPRFVHLRVHSDYSMIDG--------------------LAKTAPLVKK-------AAALGMPALAITDFTNLCGLVKFYG 55 (910)
T ss_dssp CCCCCCCCBCCGGGSSSC--------------------CSCHHHHHHH-------HHHTTCSEEEECCBTCCTTHHHHHH
T ss_pred CCceeeecccccCchhcc--------------------cCCHHHHHHH-------HHHCCCCEEEEEeCCcchhHHHHHH
Confidence 456999999998875433 2445554433 4456776653 55432 3455667
Q ss_pred HHHHcCCeEEeecccc
Q 022028 156 AVELLGLRACLVQSTM 171 (304)
Q Consensus 156 ~~~~~gir~~~~~~~~ 171 (304)
+++..|++.+.|..+.
T Consensus 56 ~~~~~gIk~I~G~Ei~ 71 (910)
T 2hnh_A 56 AGHGAGIKPIVGADFN 71 (910)
T ss_dssp HHHHHTCEEEEEEEEE
T ss_pred HHHHCCCeEEEEEEEE
Confidence 7788999998887653
No 106
>1rk6_A D-aminoacylase; TIM barrel, beta barrel, insertion, hydrolase; 1.43A {Alcaligenes faecalis} SCOP: b.92.1.6 b.92.1.6 c.1.9.11 PDB: 1rjp_A 1v51_A 1rjq_A 1rjr_A 1rk5_A 1v4y_A 1m7j_A
Probab=66.57 E-value=18 Score=32.53 Aligned_cols=25 Identities=12% Similarity=0.021 Sum_probs=20.5
Q ss_pred CCHHHHHHHHHHHHHhCCeeeEEec
Q 022028 220 ATDRLLLETRDMAREFKTGIHMHVA 244 (304)
Q Consensus 220 ~~~e~l~~~~~~a~~~~~~~~~H~~ 244 (304)
.+.+.+.++++.+++++.++.+|+.
T Consensus 211 ~~~~el~~~~~~a~~~g~~v~~H~~ 235 (496)
T 1rk6_A 211 ASTEEIIEVCRPLITHGGVYATHMR 235 (496)
T ss_dssp CCHHHHHHHHTHHHHHTCEEEEECS
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEeC
Confidence 4566677788888999999999985
No 107
>2yb1_A Amidohydrolase; HET: AMP; 1.90A {Chromobacterium violaceum} PDB: 2yb4_A
Probab=62.34 E-value=19 Score=30.06 Aligned_cols=61 Identities=13% Similarity=0.094 Sum_probs=38.8
Q ss_pred ccccCccchhhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceee--cCCCC-CHHHHHHHHH
Q 022028 82 FVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFA--EAGGQ-HVSEMAKAVE 158 (304)
Q Consensus 82 ~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~--d~~~~-~~~~~~~~~~ 158 (304)
++|+|+|...| - ...+++++. ..+.+.|+..++ |+... ......++++
T Consensus 3 ~~DLH~Ht~~S--D--------------------g~~~~~elv-------~~A~~~Gl~~iaiTDH~~~~g~~~~~~~~~ 53 (292)
T 2yb1_A 3 NIDLHFHSRTS--D--------------------GALTPTEVI-------DRAAARAPALLALTDHDCTGGLAEAAAAAA 53 (292)
T ss_dssp CEECCBCCTTT--T--------------------CSSCHHHHH-------HHHHTTCCSEEEECCBTCCTTHHHHHHHHH
T ss_pred ccccccCCCcc--C--------------------CCCCHHHHH-------HHHHHCCCCEEEEecCCccccHHHHHHHHH
Confidence 78999999764 1 123455533 345678988764 44322 2445566667
Q ss_pred HcCCeEEeecccc
Q 022028 159 LLGLRACLVQSTM 171 (304)
Q Consensus 159 ~~gir~~~~~~~~ 171 (304)
..|++.+.|..+.
T Consensus 54 ~~gi~vi~G~Ei~ 66 (292)
T 2yb1_A 54 RRGIPFLNGVEVS 66 (292)
T ss_dssp HTTCCEEEEEEEE
T ss_pred HcCCEEEEEEEEE
Confidence 7899988887654
No 108
>3o0f_A Putative metal-dependent phosphoesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: AMP; 1.94A {Bifidobacterium adolescentis} PDB: 3e0f_A*
Probab=53.84 E-value=23 Score=29.81 Aligned_cols=61 Identities=20% Similarity=0.085 Sum_probs=39.5
Q ss_pred ccccCccchhhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCcceee--cCCC-CCHHHHHHHHH
Q 022028 82 FVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFA--EAGG-QHVSEMAKAVE 158 (304)
Q Consensus 82 ~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~--d~~~-~~~~~~~~~~~ 158 (304)
++|+|+|..+|- ...+++++.. .+...|+..+. |+.. .......++++
T Consensus 14 ~~DLH~Hs~~SD----------------------G~~~~~elv~-------~A~~~Gl~~iaiTDH~~~~g~~~~~~~~~ 64 (301)
T 3o0f_A 14 GWDIHCHTVFSD----------------------GTETPRTLVE-------QARKLGLHGVAIADHDTTAGWDEATEASE 64 (301)
T ss_dssp SEEEEECCTTTT----------------------CSSCHHHHHH-------HHHHTTCSEEEECCBTCCTTHHHHHHHHH
T ss_pred eEEeeECCCCCC----------------------CCCCHHHHHH-------HHHHcCCCEEEEcCCCccccHHHHHHHHH
Confidence 699999997641 1244555433 35567887764 5543 23456677778
Q ss_pred HcCCeEEeecccc
Q 022028 159 LLGLRACLVQSTM 171 (304)
Q Consensus 159 ~~gir~~~~~~~~ 171 (304)
+.|++.+.|..+.
T Consensus 65 ~~gi~~i~GvEis 77 (301)
T 3o0f_A 65 EIGLPLLLGTEIT 77 (301)
T ss_dssp HHTCCEEEEEEEE
T ss_pred hcCCEEEEEEEEE
Confidence 8899998887654
No 109
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=52.16 E-value=13 Score=19.27 Aligned_cols=21 Identities=14% Similarity=0.178 Sum_probs=18.2
Q ss_pred CCHHHHHHHHHHHHHhCCeee
Q 022028 220 ATDRLLLETRDMAREFKTGIH 240 (304)
Q Consensus 220 ~~~e~l~~~~~~a~~~~~~~~ 240 (304)
-++|.++.+.+.|++.++++.
T Consensus 12 gtpeelkklkeeakkanirvt 32 (36)
T 2ki0_A 12 GTPEELKKLKEEAKKANIRVT 32 (36)
T ss_dssp CCHHHHHHHHHHHHHHCCCCC
T ss_pred CCHHHHHHHHHHHHhccEEEE
Confidence 488999999999999988765
No 110
>2yxo_A Histidinol phosphatase; metal-dependent, hydrolase; 1.60A {Thermus thermophilus} PDB: 2yz5_A 2z4g_A
Probab=46.00 E-value=39 Score=27.25 Aligned_cols=11 Identities=45% Similarity=0.697 Sum_probs=9.0
Q ss_pred ccccCccchhh
Q 022028 82 FVNTHVHTSQQ 92 (304)
Q Consensus 82 ~ID~H~Hl~~s 92 (304)
++|.|+|...|
T Consensus 1 ~~DlH~Ht~~S 11 (267)
T 2yxo_A 1 MVDSHVHTPLC 11 (267)
T ss_dssp CEEEEECCGGG
T ss_pred CCccCcCcCCC
Confidence 58999999764
No 111
>2hpi_A DNA polymerase III alpha subunit; POL-beta-like nucleotidyltransferase fold, transferase; HET: DNA; 3.00A {Thermus aquaticus} PDB: 2hpm_A* 3e0d_A*
Probab=41.23 E-value=49 Score=33.64 Aligned_cols=63 Identities=17% Similarity=0.230 Sum_probs=40.9
Q ss_pred cccccCccchhhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHh--cCccee--ecCCCC-CHHHHHH
Q 022028 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIH--SGVTCF--AEAGGQ-HVSEMAK 155 (304)
Q Consensus 81 G~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~--~GvTtv--~d~~~~-~~~~~~~ 155 (304)
.|+|+|+|..+|.+.| ..+++++... +.. .|...+ .|++.. ......+
T Consensus 6 ~fvdLH~HT~~SlLDG--------------------~~~~~elv~~-------A~~~~~G~~alAITDH~~~~G~~~f~~ 58 (1220)
T 2hpi_A 6 KFAHLHQHTQFSLLDG--------------------AAKLQDLLKW-------VKETTPEDPALAMTDHGNLFGAVEFYK 58 (1220)
T ss_dssp CCCCCSBCCTTSTTTC--------------------CCCHHHHHHH-------HHHHCCSSCEEEEEEETCCTTHHHHHH
T ss_pred cEeEcccccCCCcccc--------------------cCCHHHHHHH-------HHhccCCCCEEEEEecCcchhHHHHHH
Confidence 4999999998875533 2345554432 344 566555 455532 3456677
Q ss_pred HHHHcCCeEEeeccc
Q 022028 156 AVELLGLRACLVQST 170 (304)
Q Consensus 156 ~~~~~gir~~~~~~~ 170 (304)
+++..|++.++|..+
T Consensus 59 ~a~~~gIk~I~G~E~ 73 (1220)
T 2hpi_A 59 KATAMGVKPIIGYEA 73 (1220)
T ss_dssp HHHTTTCEEEEEEEE
T ss_pred HHHHcCCeEEEEEEE
Confidence 788899999888765
No 112
>3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus}
Probab=40.48 E-value=2.6e+02 Score=26.99 Aligned_cols=112 Identities=6% Similarity=-0.031 Sum_probs=65.4
Q ss_pred HHHHHHhcCcceeecCCCCCHHHHHHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCeE
Q 022028 130 CGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIR 209 (304)
Q Consensus 130 ~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 209 (304)
-+..+...|+.+++-.+....+.+.++|++.|+-.+......-..+..+..+.....+...+..++++++..+.. ..+.
T Consensus 312 dl~~~K~~G~N~iR~~h~p~~~~~~dlcDe~GilV~~E~~~~w~~~~~~~~~~~~~~~~~~~~~~~mv~r~rNHP-SIi~ 390 (801)
T 3gm8_A 312 RLKLLKDMGCNAIRTSHNPFSPAFYNLCDTMGIMVLNEGLDGWNQPKAADDYGNYFDEWWQKDMTDFIKRDRNHP-SIIM 390 (801)
T ss_dssp HHHHHHHTTCCEEEETTSCCCHHHHHHHHHHTCEEEEECCSSSSSCSSTTSGGGTHHHHHHHHHHHHHHHHTTCT-TEEE
T ss_pred HHHHHHHCCCcEEEecCCCCcHHHHHHHHHCCCEEEECCchhhcCCCCcccccHHHHHHHHHHHHHHHHhcCCCC-eEEE
Confidence 345577889999997765667889999999999886542110001111111111112222346778888877643 2333
Q ss_pred EEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEe
Q 022028 210 IWFGIRQIMNATDRLLLETRDMAREFKTGIHMHV 243 (304)
Q Consensus 210 ~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~ 243 (304)
..+.-.. ...+.+.++++.+++++++-.--+|.
T Consensus 391 Ws~gNE~-~g~~~~~~~~l~~~~k~~DptRpvt~ 423 (801)
T 3gm8_A 391 WSIGNEV-TGATPEIQHNLVSLFHQLDPDRPVTQ 423 (801)
T ss_dssp EEEEESC-SSCCHHHHHHHHHHHHHHCTTSCEEE
T ss_pred EECccCC-CCcHHHHHHHHHHHHHHHCCCCCEEE
Confidence 3444332 23335788889999999875444443
No 113
>3f2b_A DNA-directed DNA polymerase III alpha chain; DNA polymerase C, DNA polymerase III; HET: DGT; 2.39A {Geobacillus kaustophilus} PDB: 3f2c_A* 3f2d_A*
Probab=38.41 E-value=62 Score=32.30 Aligned_cols=64 Identities=13% Similarity=0.050 Sum_probs=41.4
Q ss_pred cccccCccchhhhhhcccCCCCccccccccccCccCCCChHHHHHHHHHHHHHHHhcCccee--ecCCCC-CHHHHHHHH
Q 022028 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCF--AEAGGQ-HVSEMAKAV 157 (304)
Q Consensus 81 G~ID~H~Hl~~s~~~g~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv--~d~~~~-~~~~~~~~~ 157 (304)
-++|+|+|..+|.+.| ..+++++... +...|...+ .|+... ......+++
T Consensus 115 ~~vdLH~HT~~S~lDG--------------------~~~~~eLv~~-------A~~~G~~aiAITDH~~~~G~~~~~~~a 167 (1041)
T 3f2b_A 115 KRVELHLHTPMSQMDA--------------------VTSVTKLIEQ-------AKKWGHPAIAVTDHAVVQSFPEAYSAA 167 (1041)
T ss_dssp CCCBCCBCCTTSTTTC--------------------CSCHHHHHHH-------HHHTTCSCEEECCBSCCTTHHHHHHHH
T ss_pred ceEEcccCCcCccccc--------------------cCCHHHHHHH-------HHHCCCCEEEEecccchhhHHHHHHHH
Confidence 3899999998865433 2345554433 345566655 465532 345667778
Q ss_pred HHcCCeEEeecccc
Q 022028 158 ELLGLRACLVQSTM 171 (304)
Q Consensus 158 ~~~gir~~~~~~~~ 171 (304)
+..|++.+.|..+.
T Consensus 168 ~~~gIk~I~G~E~~ 181 (1041)
T 3f2b_A 168 KKHGMKVIYGLEAN 181 (1041)
T ss_dssp HHHTCCEEEEEEEE
T ss_pred HHCCCEEEEEEEEE
Confidence 88999998887653
No 114
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=37.49 E-value=1.6e+02 Score=23.65 Aligned_cols=61 Identities=3% Similarity=-0.029 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHhCCeeeEEecC-----ChhhHHHHHHhcCC---------------CCCHHHHHHHhCCCCCCeeEEEe
Q 022028 223 RLLLETRDMAREFKTGIHMHVAE-----IPYENQVVMDTRKV---------------DHGTVTFLDKIEFLQNNLLSAHT 282 (304)
Q Consensus 223 e~l~~~~~~a~~~~~~~~~H~~E-----~~~~~~~~~~~~g~---------------~~~~~~~l~~~g~l~~~~~~~H~ 282 (304)
+.++++.+.|+++|+.+.+|-.. +..+.....+..+. +..+.+.+++.+ +++..+|.
T Consensus 123 ~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~~~~~l~~~~~~~~vg~~~D~~h~~~~g~d~~~~l~~~~---~~i~~vHl 199 (286)
T 3dx5_A 123 NRIRMICELFAQHNMYVLLETHPNTLTDTLPSTLELLGEVDHPNLKINLDFLHIWESGADPVDSFQQLR---PWIQHYHF 199 (286)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCTTSTTSSHHHHHHHHHHHCCTTEEEEEEHHHHHHTTCCHHHHHHHHG---GGEEEEEE
T ss_pred HHHHHHHHHHHHhCCEEEEecCCCcCcCCHHHHHHHHHhcCCCCeEEEeccccHhhcCCCHHHHHHHHH---hHheEEEe
Confidence 44667788888889999888653 33333333333321 123556665554 56666776
Q ss_pred ccCC
Q 022028 283 VWVN 286 (304)
Q Consensus 283 ~~l~ 286 (304)
.-..
T Consensus 200 ~D~~ 203 (286)
T 3dx5_A 200 KNIS 203 (286)
T ss_dssp CEES
T ss_pred cCCc
Confidence 5543
No 115
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=35.47 E-value=1.2e+02 Score=26.21 Aligned_cols=112 Identities=11% Similarity=0.072 Sum_probs=65.4
Q ss_pred HHhcCcceeec----CCC-CCHHHHHHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCCe
Q 022028 134 LIHSGVTCFAE----AGG-QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRI 208 (304)
Q Consensus 134 ~l~~GvTtv~d----~~~-~~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 208 (304)
++.+|+-.++= .+. .....+.+++++.++-..++....+....+...|....++..++.+.+.++...+.+-..+
T Consensus 101 a~e~G~dklRINPGNig~~~~~~~vv~~ak~~~~piRIGvN~GSL~~~ll~~yg~~~~eamVeSAl~~~~~~e~~gf~~i 180 (366)
T 3noy_A 101 SMEKGVHGIRINPGNIGKEEIVREIVEEAKRRGVAVRIGVNSGSLEKDLLEKYGYPSAEALAESALRWSEKFEKWGFTNY 180 (366)
T ss_dssp HHHTTCSEEEECHHHHSCHHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCE
T ss_pred HHHhCCCeEEECCcccCchhHHHHHHHHHHHcCCCEEEecCCcCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHhCCCCeE
Confidence 56778877641 111 1235688889999988777644332111111123334566666766666666655433445
Q ss_pred EEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEecCChhh
Q 022028 209 RIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYE 249 (304)
Q Consensus 209 ~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~E~~~~ 249 (304)
.+.+.. +.....+++-+.++++.+.|+++-+.|-...
T Consensus 181 viS~K~----S~v~~~i~ayr~la~~~dyPLHlGvTEAG~~ 217 (366)
T 3noy_A 181 KVSIKG----SDVLQNVRANLIFAERTDVPLHIGITEAGMG 217 (366)
T ss_dssp EEEEEC----SSHHHHHHHHHHHHHHCCCCEEECCSSCCSH
T ss_pred EEeeec----CChHHHHHHHHHHHhccCCCEEEccCCCCCC
Confidence 433321 2334577778888989899987777775443
No 116
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=34.02 E-value=32 Score=27.70 Aligned_cols=12 Identities=25% Similarity=0.481 Sum_probs=9.4
Q ss_pred ccccccCccchh
Q 022028 80 PGFVNTHVHTSQ 91 (304)
Q Consensus 80 PG~ID~H~Hl~~ 91 (304)
.|++|.|+|...
T Consensus 3 ~~m~D~H~Ht~~ 14 (247)
T 2wje_A 3 MGMIDIHSHIVF 14 (247)
T ss_dssp -CEEECCBCCST
T ss_pred CCCEEEecccCC
Confidence 468999999954
No 117
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=32.98 E-value=1.8e+02 Score=23.11 Aligned_cols=107 Identities=10% Similarity=-0.002 Sum_probs=56.5
Q ss_pred HHHHhcCcceeecCC----CCCHHHHHHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCCCC
Q 022028 132 IELIHSGVTCFAEAG----GQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGR 207 (304)
Q Consensus 132 ~~~l~~GvTtv~d~~----~~~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (304)
..+...|...+--.. ......+.+.+++.|+.........+. ..++ .......++...+.++.....+...
T Consensus 25 ~~~~~~G~~~vEl~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~---~~~d--~~~r~~~~~~~~~~i~~a~~lG~~~ 99 (275)
T 3qc0_A 25 DICLKHGITAIAPWRDQVAAIGLGEAGRIVRANGLKLTGLCRGGFF---PAPD--ASGREKAIDDNRRAVDEAAELGADC 99 (275)
T ss_dssp HHHHHTTCCEEECBHHHHHHHCHHHHHHHHHHHTCEESCEEEEECC---CCSS--HHHHHHHHHHHHHHHHHHHHTTCSC
T ss_pred HHHHHcCCCEEEeccccccccCHHHHHHHHHHcCCceEEeecCCCc---CCCC--HHHHHHHHHHHHHHHHHHHHhCCCE
Confidence 344567887763211 123566788888999986422111110 0111 0112233444555555555555555
Q ss_pred eEEEEeeCcccCCC--------HHHHHHHHHHHHHhCCeeeEEe
Q 022028 208 IRIWFGIRQIMNAT--------DRLLLETRDMAREFKTGIHMHV 243 (304)
Q Consensus 208 i~~~~~~~~~~~~~--------~e~l~~~~~~a~~~~~~~~~H~ 243 (304)
+.+..+.......+ -+.++++.+.|+++|+.+.+|-
T Consensus 100 v~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~ 143 (275)
T 3qc0_A 100 LVLVAGGLPGGSKNIDAARRMVVEGIAAVLPHARAAGVPLAIEP 143 (275)
T ss_dssp EEEECBCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEECC
T ss_pred EEEeeCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeE
Confidence 55443221111112 2457778889999999999995
No 118
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=31.52 E-value=65 Score=27.05 Aligned_cols=28 Identities=14% Similarity=0.050 Sum_probs=24.0
Q ss_pred CCCHHHHHHHHHHHHHhCCeeeEEecCC
Q 022028 219 NATDRLLLETRDMAREFKTGIHMHVAEI 246 (304)
Q Consensus 219 ~~~~e~l~~~~~~a~~~~~~~~~H~~E~ 246 (304)
...++.++.+.++|.++|+++.+|....
T Consensus 154 ~l~d~~~~p~~~~~~e~~lpv~iH~~~~ 181 (334)
T 2hbv_A 154 DLDDATLEAFLTHCANEDIPILVHPWDM 181 (334)
T ss_dssp CTTSHHHHHHHHHHHHTTCCEEEECCSC
T ss_pred CCCcHHHHHHHHHHHHCCCEEEECCCCC
Confidence 4566789999999999999999998753
No 119
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=30.76 E-value=2.2e+02 Score=23.20 Aligned_cols=52 Identities=10% Similarity=-0.018 Sum_probs=34.2
Q ss_pred CCCHHHHHHHHHHHHHhCCeeeEEe--cCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCC
Q 022028 219 NATDRLLLETRDMAREFKTGIHMHV--AEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN 286 (304)
Q Consensus 219 ~~~~e~l~~~~~~a~~~~~~~~~H~--~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~ 286 (304)
..+.+.++++.+.|. ++++.+|- +...+..+ .+++|.++|+ .-++.++...+
T Consensus 100 ~iD~~~~~~Li~~a~--~~~vTFHRAfD~~~d~~~-----------ale~L~~lG~---~rILTSG~~~~ 153 (256)
T 1twd_A 100 NVDMPRMEKIMAAAG--PLAVTFHRAFDMCANPLY-----------TLNNLAELGI---ARVLTSGQKSD 153 (256)
T ss_dssp SBCHHHHHHHHHHHT--TSEEEECGGGGGCSCHHH-----------HHHHHHHHTC---CEEEECTTSSS
T ss_pred CcCHHHHHHHHHHhC--CCcEEEECchhccCCHHH-----------HHHHHHHcCC---CEEECCCCCCC
Confidence 468888998988775 78899994 33433332 4666777776 44666665444
No 120
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=30.46 E-value=1.3e+02 Score=23.82 Aligned_cols=90 Identities=9% Similarity=0.019 Sum_probs=50.7
Q ss_pred HHHHhcCcceeecCCC--------CCHHHHHHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCC
Q 022028 132 IELIHSGVTCFAEAGG--------QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHA 203 (304)
Q Consensus 132 ~~~l~~GvTtv~d~~~--------~~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (304)
..+.+.|...+--... ...+.+.+.+++.|+.......... ...+.++...+..+..
T Consensus 37 ~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~------------~~~~~~~~~i~~A~~l--- 101 (257)
T 3lmz_A 37 KTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYAVGPIYM------------KSEEEIDRAFDYAKRV--- 101 (257)
T ss_dssp HHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEEEEEEEE------------CSHHHHHHHHHHHHHH---
T ss_pred HHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEEEecccc------------CCHHHHHHHHHHHHHh---
Confidence 3455678877632111 1124667788888998753221111 1223344444444443
Q ss_pred CCCCeEEEEeeCcccCCCHHHHHHHHHHHHHhCCeeeEEec
Q 022028 204 ADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVA 244 (304)
Q Consensus 204 ~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~~~~H~~ 244 (304)
+...+.+ .| ..+.++++.+.|+++|+.+.+|-.
T Consensus 102 Ga~~v~~--~p------~~~~l~~l~~~a~~~gv~l~lEn~ 134 (257)
T 3lmz_A 102 GVKLIVG--VP------NYELLPYVDKKVKEYDFHYAIHLH 134 (257)
T ss_dssp TCSEEEE--EE------CGGGHHHHHHHHHHHTCEEEEECC
T ss_pred CCCEEEe--cC------CHHHHHHHHHHHHHcCCEEEEecC
Confidence 2233432 22 146788899999999999999966
No 121
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=30.34 E-value=2.1e+02 Score=22.81 Aligned_cols=52 Identities=10% Similarity=0.106 Sum_probs=36.4
Q ss_pred CCCHHHHHHHHHHHHHhCCeeeEEe--cCC--hhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCC
Q 022028 219 NATDRLLLETRDMAREFKTGIHMHV--AEI--PYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN 286 (304)
Q Consensus 219 ~~~~e~l~~~~~~a~~~~~~~~~H~--~E~--~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~ 286 (304)
..+.+.++++.+.|. ++++.+|- ++. .+..+ .+++|.++|+ .-++.|+...+
T Consensus 103 ~iD~~~~~~Li~~a~--~~~vTFHRAFD~~~~~d~~~-----------ale~L~~lGv---~rILTSG~~~~ 158 (224)
T 2bdq_A 103 HIDTEAIEQLLPATQ--GLPLVFHMAFDVIPKSDQKK-----------SIDQLVALGF---TRILLHGSSNG 158 (224)
T ss_dssp SBCHHHHHHHHHHHT--TCCEEECGGGGGSCTTTHHH-----------HHHHHHHTTC---CEEEECSCSSC
T ss_pred CcCHHHHHHHHHHhC--CCeEEEECchhccCCcCHHH-----------HHHHHHHcCC---CEEECCCCCCC
Confidence 468889999998775 78899994 333 33222 5777888887 45778877665
No 122
>4dci_A Uncharacterized protein; PSI-biology, midwest center for structural genomics, MCSG, S genomics, unknown function; 2.82A {Synechococcus SP}
Probab=29.65 E-value=33 Score=25.55 Aligned_cols=17 Identities=18% Similarity=0.223 Sum_probs=14.3
Q ss_pred eeeeEEEeCCEEEEecC
Q 022028 39 RNGGVFVVQDRIKAIGQ 55 (304)
Q Consensus 39 ~~~~I~I~~g~I~~i~~ 55 (304)
-+..|+|+||+|++|..
T Consensus 133 m~~EIvv~DGvV~eIR~ 149 (150)
T 4dci_A 133 MQVAIVVRDGVIQSIEE 149 (150)
T ss_dssp SCEEEEEETTEEEEEEC
T ss_pred cCcEEEEeCCEEEEeeC
Confidence 36789999999999863
No 123
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=29.26 E-value=1.8e+02 Score=22.98 Aligned_cols=22 Identities=9% Similarity=0.125 Sum_probs=15.8
Q ss_pred CCHHHHHHHHHHHHHhCCeeeE
Q 022028 220 ATDRLLLETRDMAREFKTGIHM 241 (304)
Q Consensus 220 ~~~e~l~~~~~~a~~~~~~~~~ 241 (304)
.+.+.++..+++|++.|.+..+
T Consensus 86 ~~~~~~~~~i~~A~~lGa~~v~ 107 (257)
T 3lmz_A 86 KSEEEIDRAFDYAKRVGVKLIV 107 (257)
T ss_dssp CSHHHHHHHHHHHHHHTCSEEE
T ss_pred CCHHHHHHHHHHHHHhCCCEEE
Confidence 4567778888888888875443
No 124
>1wj6_A KIAA0049 protein, RSGI RUH-024; PB1 domain, protein binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: d.15.2.2
Probab=27.58 E-value=77 Score=21.75 Aligned_cols=28 Identities=21% Similarity=0.137 Sum_probs=24.0
Q ss_pred CCHHHHHHHHHHHHHhCCeeeEEecCCh
Q 022028 220 ATDRLLLETRDMAREFKTGIHMHVAEIP 247 (304)
Q Consensus 220 ~~~e~l~~~~~~a~~~~~~~~~H~~E~~ 247 (304)
.++..+++++++|.+.+-.+++|+.++.
T Consensus 69 ~Sq~E~eEAlkva~k~~n~L~m~V~~~~ 96 (101)
T 1wj6_A 69 NSQGEYEEALKMAVKQGNQLQMQVHEGS 96 (101)
T ss_dssp CSHHHHHHHHHHHHHHTSEEEEECCBCC
T ss_pred ecHHHHHHHHHHhccCCCEEEEEEeecc
Confidence 4788899999999998888999998753
No 125
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=26.78 E-value=2.7e+02 Score=23.00 Aligned_cols=107 Identities=9% Similarity=-0.058 Sum_probs=52.6
Q ss_pred HHHHHHhcCcceeecCCCCC------------------HHHHHHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHH
Q 022028 130 CGIELIHSGVTCFAEAGGQH------------------VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQ 191 (304)
Q Consensus 130 ~~~~~l~~GvTtv~d~~~~~------------------~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~ 191 (304)
.+..++.+|++.+.-+.+.. .....+.+++.|+..-...... .+ ++......++..
T Consensus 88 ~i~~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~-~~---~e~~~~~~~~~~-- 161 (302)
T 2ftp_A 88 GFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCV-LG---CPYDGDVDPRQV-- 161 (302)
T ss_dssp HHHHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECT-TC---BTTTBCCCHHHH--
T ss_pred HHHHHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEE-ee---CCcCCCCCHHHH--
Confidence 34456778999875322111 1345666778888763222111 11 111111223332
Q ss_pred HHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHHHHHHHHH-h-CCeeeEEecCCh
Q 022028 192 SQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMARE-F-KTGIHMHVAEIP 247 (304)
Q Consensus 192 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~a~~-~-~~~~~~H~~E~~ 247 (304)
.++++...+.+.+.+.+. ..++. .+|+...++++..++ . ++++.+|.+.+.
T Consensus 162 --~~~~~~~~~~G~d~i~l~-DT~G~--~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~ 214 (302)
T 2ftp_A 162 --AWVARELQQMGCYEVSLG-DTIGV--GTAGATRRLIEAVASEVPRERLAGHFHDTY 214 (302)
T ss_dssp --HHHHHHHHHTTCSEEEEE-ESSSC--CCHHHHHHHHHHHTTTSCGGGEEEEEBCTT
T ss_pred --HHHHHHHHHcCCCEEEEe-CCCCC--cCHHHHHHHHHHHHHhCCCCeEEEEeCCCc
Confidence 233332223333444433 33343 567776666665554 4 578999986654
No 126
>3tc3_A UV damage endonuclease; TIM-barrel, hydrolase; 1.50A {Sulfolobus acidocaldarius}
Probab=26.57 E-value=1.3e+02 Score=25.39 Aligned_cols=14 Identities=0% Similarity=-0.294 Sum_probs=9.1
Q ss_pred HHHHHHHHcCCeEE
Q 022028 152 EMAKAVELLGLRAC 165 (304)
Q Consensus 152 ~~~~~~~~~gir~~ 165 (304)
.+++-..+-||+.+
T Consensus 64 ~il~~n~~~~I~~y 77 (310)
T 3tc3_A 64 NILEWNLKHEILFF 77 (310)
T ss_dssp HHHHHHHHTTCCEE
T ss_pred HHHHHHHHcCCEEE
Confidence 34555677788775
No 127
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=25.53 E-value=1.2e+02 Score=23.99 Aligned_cols=106 Identities=11% Similarity=0.042 Sum_probs=53.0
Q ss_pred CHHHHHHHHHHcCCeEEeecccccCCCCCC-CCcccCChHHHHHHHHHHHHHHcCCCCCCeEEEEeeCcccCCCHHHHHH
Q 022028 149 HVSEMAKAVELLGLRACLVQSTMDCGEGLP-ASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLE 227 (304)
Q Consensus 149 ~~~~~~~~~~~~gir~~~~~~~~d~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~ 227 (304)
.....++.+.+.|...+--......+.++. ..|........+++.++.+++. |.-...+.+. ...+.+.++.
T Consensus 23 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----gl~i~~~~~~--~~~~~~~~~~ 95 (262)
T 3p6l_A 23 PLTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASK-----GIKIVGTGVY--VAEKSSDWEK 95 (262)
T ss_dssp CHHHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHT-----TCEEEEEEEE--CCSSTTHHHH
T ss_pred CHHHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHc-----CCeEEEEecc--CCccHHHHHH
Confidence 466778888889988753321110000000 0011112234445555555543 2222223322 2235567889
Q ss_pred HHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCC
Q 022028 228 TRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEF 272 (304)
Q Consensus 228 ~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~ 272 (304)
.+++|++.|.+..+-.. +.... .+ ..++.++.|+
T Consensus 96 ~i~~A~~lGa~~v~~~~-~~~~~---~~-------l~~~a~~~gv 129 (262)
T 3p6l_A 96 MFKFAKAMDLEFITCEP-ALSDW---DL-------VEKLSKQYNI 129 (262)
T ss_dssp HHHHHHHTTCSEEEECC-CGGGH---HH-------HHHHHHHHTC
T ss_pred HHHHHHHcCCCEEEecC-CHHHH---HH-------HHHHHHHhCC
Confidence 99999999986544322 21111 11 5667777887
No 128
>3e74_A Allantoinase; (beta/alpha)8-barrel domain, small beta-sheet domain, hydrolase, metal-binding, purine metabolism, zinc; HET: KCX; 2.10A {Escherichia coli}
Probab=24.62 E-value=38 Score=30.32 Aligned_cols=58 Identities=10% Similarity=-0.007 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc
Q 022028 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN 291 (304)
Q Consensus 223 e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~ 291 (304)
+.+..+.+++++.+.++++....+....+ .++.+++.|+.-...++.|+..++++++.
T Consensus 242 ~av~~~l~la~~~g~~lhi~Hvst~~~l~-----------li~~ak~~G~~vt~e~~ph~l~l~~~~~~ 299 (473)
T 3e74_A 242 EAIRRVLYLAKVAGCRLHVCHVSSPEGVE-----------EVTRARQEGQDITCESCPHYFVLDTDQFE 299 (473)
T ss_dssp HHHHHHHHHHHHHTCCEEECSCCSHHHHH-----------HHHHHHHTTCCEEEEECTHHHHCCHHHHH
T ss_pred HHHHHHHHHHHHhCCcEEEEeCCCHHHHH-----------HHHHHHHcCCCeEEEEchHhhhcCHHHHh
Confidence 34667889999999776552222333222 45566667763333456788889988865
No 129
>3sfw_A Dihydropyrimidinase; hydrolase, zinc binding; HET: KCX; 1.73A {Brevibacillus agri} PDB: 1yny_A 1k1d_A*
Probab=24.14 E-value=68 Score=28.36 Aligned_cols=58 Identities=3% Similarity=-0.047 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCe---eEEEeccCCcchhccc
Q 022028 222 DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNL---LSAHTVWVNHTEVNCT 293 (304)
Q Consensus 222 ~e~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~---~~~H~~~l~~~di~~p 293 (304)
.+.+....+++++.+.++++....+....+ .++.+++.|+ ++ ++.|..+++++++..+
T Consensus 218 ~~av~~~~~la~~~g~~~hi~H~s~~~~l~-----------~i~~ak~~G~---~vt~e~~ph~l~l~~~~~~~~ 278 (461)
T 3sfw_A 218 GEATGRAIALTALADAQLYVVHVSCADAVR-----------RIAEAREKGW---NVYGETCPQYLVLDITALEKP 278 (461)
T ss_dssp HHHHHHHHHHHHHTTCEEEECSCCSHHHHH-----------HHHHHHHTTC---EEEEEECHHHHHCCGGGGGCT
T ss_pred HHHHHHHHHHHHHhCCCEEEEecCcHHHHH-----------HHHHHHhcCC---cEEEeeccceEEEcHHHhcCc
Confidence 345667888999988886552222322222 3555666666 55 5667777898887643
No 130
>3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research CON nysgxrc; 2.60A {Bacillus halodurans}
Probab=23.84 E-value=44 Score=29.41 Aligned_cols=57 Identities=9% Similarity=-0.083 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhc
Q 022028 224 LLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVN 291 (304)
Q Consensus 224 ~l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~ 291 (304)
.++++.+++++.+.++++....+....+ .++.+.+.|+.-.-.++.|...++++++.
T Consensus 225 av~~~~~la~~~g~~~~i~H~s~~~~~~-----------~i~~ak~~G~~v~~e~~ph~l~l~~~~~~ 281 (448)
T 3hm7_A 225 AVERILRFAQLTCCPIHICHVSSRKVLK-----------RIKQAKGEGVNVSVETCPHYLLFSLDEFA 281 (448)
T ss_dssp HHHHHHHHHHHHTCCEEECCCCCHHHHH-----------HHHHHHHTTCCEEEEECHHHHHCCHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEEeCCCHHHHH-----------HHHHHHhcCCCEEEEechHHHccCHHHhc
Confidence 4667888999999886653333433333 35555666763223345666678877664
No 131
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=23.38 E-value=91 Score=26.07 Aligned_cols=28 Identities=14% Similarity=0.252 Sum_probs=23.5
Q ss_pred CCCHHHHHHHHHHHHHhCCeeeEEecCC
Q 022028 219 NATDRLLLETRDMAREFKTGIHMHVAEI 246 (304)
Q Consensus 219 ~~~~e~l~~~~~~a~~~~~~~~~H~~E~ 246 (304)
...++.++.+.++|.++++++.+|....
T Consensus 151 ~l~d~~~~~~~~~~~e~~lpv~iH~~~~ 178 (336)
T 2wm1_A 151 DLNAQELFPVYAAAERLKCSLFVHPWDM 178 (336)
T ss_dssp ETTCGGGHHHHHHHHHHTCEEEEECCSC
T ss_pred CCCCccHHHHHHHHHHcCCEEEECCCCC
Confidence 3456678889999999999999998753
No 132
>2bkf_A Zinc-finger protein NBR1 (NEXT to breast cancer 1; PB1 domain, interaction domain, Z finger; 1.56A {Homo sapiens} SCOP: d.15.2.2 PDB: 2g4s_A
Probab=22.40 E-value=95 Score=20.66 Aligned_cols=26 Identities=23% Similarity=0.199 Sum_probs=22.2
Q ss_pred CCHHHHHHHHHHHHHhCCeeeEEecC
Q 022028 220 ATDRLLLETRDMAREFKTGIHMHVAE 245 (304)
Q Consensus 220 ~~~e~l~~~~~~a~~~~~~~~~H~~E 245 (304)
.|+..+++++++|.+.+-.+++|+.+
T Consensus 61 ~Sq~E~eEAlkva~k~~n~L~m~v~~ 86 (87)
T 2bkf_A 61 NSQGEYEEALKMAVKQGNQLQMQVHE 86 (87)
T ss_dssp CSHHHHHHHHHHHHHTTTEEEEEEEE
T ss_pred ecHHHHHHHHHHhccCCCEEEEEEec
Confidence 47888999999999988889998864
No 133
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=21.48 E-value=1.5e+02 Score=24.03 Aligned_cols=23 Identities=4% Similarity=-0.008 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHhCCeeeEEecCCh
Q 022028 224 LLLETRDMAREFKTGIHMHVAEIP 247 (304)
Q Consensus 224 ~l~~~~~~a~~~~~~~~~H~~E~~ 247 (304)
.+++.++.|+++|... +-++.+.
T Consensus 86 ~~~~yl~~~k~lGf~~-iEiS~G~ 108 (251)
T 1qwg_A 86 KFDEFLNECEKLGFEA-VEISDGS 108 (251)
T ss_dssp CHHHHHHHHHHHTCCE-EEECCSS
T ss_pred cHHHHHHHHHHcCCCE-EEECCCc
Confidence 4666777777777653 3555443
No 134
>3nur_A Amidohydrolase; TIM barrel; 1.75A {Staphylococcus aureus}
Probab=21.14 E-value=3e+02 Score=23.41 Aligned_cols=29 Identities=14% Similarity=0.015 Sum_probs=24.1
Q ss_pred CCCHHHHHHHHHHHHHhCCeeeEEecCCh
Q 022028 219 NATDRLLLETRDMAREFKTGIHMHVAEIP 247 (304)
Q Consensus 219 ~~~~e~l~~~~~~a~~~~~~~~~H~~E~~ 247 (304)
...++.+..+.+.|.++|+++.+|.....
T Consensus 169 ~~~d~~~~p~~~~~~e~g~pV~iH~g~~~ 197 (357)
T 3nur_A 169 FLDQDKYDIIFKTAENLDVPIYLHPAPVN 197 (357)
T ss_dssp CTTSGGGHHHHHHHHHHTCCEEEECCCCC
T ss_pred CCCCccHHHHHHHHHhcCCeEEEecCCCC
Confidence 34566788899999999999999987654
No 135
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=20.93 E-value=76 Score=27.15 Aligned_cols=48 Identities=10% Similarity=0.034 Sum_probs=29.8
Q ss_pred ChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEeccCCcchhcccccccc
Q 022028 246 IPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEVNCTFGNFK 298 (304)
Q Consensus 246 ~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~l~~~di~~p~sN~~ 298 (304)
+.++++.+.+.|.. ..+.+.+.|+-+=.+.+.|+.-+ +++-||.+|.+
T Consensus 134 t~~eI~~ii~~f~~---AA~~a~~aGfDgVEih~ahGYLl--~qFlsp~~N~R 181 (343)
T 3kru_A 134 SVEEIKSIVKAFGE---AAKRANLAGYDVVEIHAAHGYLI--HEFLSPLSNKR 181 (343)
T ss_dssp CHHHHHHHHHHHHH---HHHHHHHHTCSEEEEEECTTSHH--HHHHCTTTCCC
T ss_pred CHHHHHHHHHHHHH---HHhhccccCCceEEEecccchhH--HHhhccccccc
Confidence 44667777777764 67777888984433444444333 45678888765
No 136
>2q01_A Uronate isomerase; structural genomics, protein structure initiative NEW YORK SGX research center for structural genomics, nysgx; 2.34A {Caulobacter crescentus}
Probab=20.63 E-value=90 Score=28.27 Aligned_cols=77 Identities=12% Similarity=0.042 Sum_probs=45.4
Q ss_pred HHHHHHHHHHhCCeeeEEecCChhhHHHHHHhcCCC------------CCHHHHHHHhCCCC-CCeeEEEeccCC-cchh
Q 022028 225 LLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVD------------HGTVTFLDKIEFLQ-NNLLSAHTVWVN-HTEV 290 (304)
Q Consensus 225 l~~~~~~a~~~~~~~~~H~~E~~~~~~~~~~~~g~~------------~~~~~~l~~~g~l~-~~~~~~H~~~l~-~~di 290 (304)
+..+.+.+.++|.++++|+.-..+.+....+.+|.. .....+|+...-.+ +++++-|+..-+ ..++
T Consensus 292 l~~l~~~~~e~gw~mQlH~Ga~Rn~n~~m~~~~G~d~G~D~~~~~~~a~~L~~lL~~l~~~~~pktILy~Lnp~~y~~el 371 (497)
T 2q01_A 292 LTEMAKMSLDDGLVMQIHPGSHRNHNVGLLNSHGRDKGADIPMRTEYVDALKPLLTRLGNDPRLSIILFTLDETTYSREL 371 (497)
T ss_dssp HHHHHHHHHHHCCEEEECCCEECCCCHHHHHHTCSSSSCCEECCCCCTTTSHHHHHHHTTCTTCCEEECCSCTTHHHHTH
T ss_pred HHHHHHHHHhcCCcEEEeeccCCCCCHHHHHHcCCCCCCCCCCchHHHHHHHHHHHHHhhcCCCCeEEEeCCcchhHHHH
Confidence 344566778889999999865455555555566621 11344555544333 788886665554 4445
Q ss_pred c----ccccccccccc
Q 022028 291 N----CTFGNFKYAVH 302 (304)
Q Consensus 291 ~----~p~sN~~l~~~ 302 (304)
. +.. |.++|+.
T Consensus 372 atlag~Fp-kvq~G~~ 386 (497)
T 2q01_A 372 APLAGHYP-VLKLGPS 386 (497)
T ss_dssp HHHHTTCT-TEEECCC
T ss_pred HHHHccCC-ccccCCc
Confidence 2 443 6666653
No 137
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=20.60 E-value=4.5e+02 Score=23.39 Aligned_cols=103 Identities=12% Similarity=0.074 Sum_probs=55.5
Q ss_pred HHHHHHhcCcceeecCCC--C--CHHHHHHHHHHcCCeEEeecccccCCCCCCCCcccCChHHHHHHHHHHHHHHcCCCC
Q 022028 130 CGIELIHSGVTCFAEAGG--Q--HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAAD 205 (304)
Q Consensus 130 ~~~~~l~~GvTtv~d~~~--~--~~~~~~~~~~~~gir~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (304)
.+..++.+|+..++-+.. . .....++.+++.|.+......+.+ ++ .+ ..+..++.++++.+ .+.
T Consensus 105 ~v~~a~~~Gvd~i~if~~~sd~~ni~~~i~~ak~~G~~v~~~i~~~~-~~----~~---~~e~~~~~a~~l~~----~Ga 172 (464)
T 2nx9_A 105 FVERAVKNGMDVFRVFDAMNDVRNMQQALQAVKKMGAHAQGTLCYTT-SP----VH---NLQTWVDVAQQLAE----LGV 172 (464)
T ss_dssp HHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCC-CT----TC---CHHHHHHHHHHHHH----TTC
T ss_pred HHHHHHhCCcCEEEEEEecCHHHHHHHHHHHHHHCCCEEEEEEEeee-CC----CC---CHHHHHHHHHHHHH----CCC
Confidence 445567889987764432 1 234567778888988754443333 21 11 23333333433333 233
Q ss_pred CCeEEEEeeCcccCCCHHHHHHHHHHHH-HhCCeeeEEecCCh
Q 022028 206 GRIRIWFGIRQIMNATDRLLLETRDMAR-EFKTGIHMHVAEIP 247 (304)
Q Consensus 206 ~~i~~~~~~~~~~~~~~e~l~~~~~~a~-~~~~~~~~H~~E~~ 247 (304)
..| .+.-. .-..+|..+.++++..+ +.++++.+|.+.+.
T Consensus 173 d~I--~l~DT-~G~~~P~~v~~lv~~l~~~~~~~i~~H~Hnd~ 212 (464)
T 2nx9_A 173 DSI--ALKDM-AGILTPYAAEELVSTLKKQVDVELHLHCHSTA 212 (464)
T ss_dssp SEE--EEEET-TSCCCHHHHHHHHHHHHHHCCSCEEEEECCTT
T ss_pred CEE--EEcCC-CCCcCHHHHHHHHHHHHHhcCCeEEEEECCCC
Confidence 333 22211 12346777666665554 46899999987765
No 138
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=20.42 E-value=87 Score=25.53 Aligned_cols=13 Identities=8% Similarity=0.258 Sum_probs=9.6
Q ss_pred HHHHHhcCcceee
Q 022028 131 GIELIHSGVTCFA 143 (304)
Q Consensus 131 ~~~~l~~GvTtv~ 143 (304)
+..+.+.|++.++
T Consensus 26 ~~~a~~~G~~~i~ 38 (262)
T 3qy7_A 26 ARAAVRQGIRTII 38 (262)
T ss_dssp HHHHHHTTCCEEE
T ss_pred HHHHHHCCCCEEE
Confidence 3456778999985
No 139
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=20.14 E-value=68 Score=28.07 Aligned_cols=46 Identities=7% Similarity=-0.135 Sum_probs=30.4
Q ss_pred ChhhHHHHHHhcCCCCCHHHHHHHhCCCCCCeeEEEecc--CCcchhcccccccc
Q 022028 246 IPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVW--VNHTEVNCTFGNFK 298 (304)
Q Consensus 246 ~~~~~~~~~~~~g~~~~~~~~l~~~g~l~~~~~~~H~~~--l~~~di~~p~sN~~ 298 (304)
+.++++.+.+.|+. ......+.|+-+ +=+|+.+ |= +++-.|.+|.+
T Consensus 163 t~~eI~~ii~~F~~---AA~rA~~AGFDg---VEIH~AhGYLl-~QFLSp~tN~R 210 (400)
T 4gbu_A 163 TKDEIKQYIKEYVQ---AAKNSIAAGADG---VEIHSANGYLL-NQFLDPHSNTR 210 (400)
T ss_dssp CHHHHHHHHHHHHH---HHHHHHHTTCSE---EEEECCTTSHH-HHHHCTTTCCC
T ss_pred CHHHHHHHHHHHHH---HHHHHHhcCcCe---eeecccccchH-HheecCcCCCC
Confidence 45677777777775 688888999944 5555543 21 44557777764
No 140
>4inf_A Metal-dependent hydrolase; amidohydrolase, metal binding site, enzyme functi initiative, EFI; 1.48A {Novosphingobium aromaticivorans} PDB: 4ing_A*
Probab=20.13 E-value=2.3e+02 Score=24.31 Aligned_cols=29 Identities=14% Similarity=0.117 Sum_probs=24.2
Q ss_pred CCCHHHHHHHHHHHHHhCCeeeEEecCCh
Q 022028 219 NATDRLLLETRDMAREFKTGIHMHVAEIP 247 (304)
Q Consensus 219 ~~~~e~l~~~~~~a~~~~~~~~~H~~E~~ 247 (304)
...++.+..+.+.|.++|+++.+|.....
T Consensus 187 ~l~d~~~~pi~~~~~e~g~pV~iH~g~~~ 215 (373)
T 4inf_A 187 YLDEEFFDPIFRALVEVDQPLYIHPATSP 215 (373)
T ss_dssp CTTSGGGHHHHHHHHHHTCCEEECCCCCC
T ss_pred CCCCcchHHHHHHHHHcCCeEEECCCCCC
Confidence 45666788899999999999999987654
Done!