BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022029
(304 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6P829|NOSIP_XENTR Nitric oxide synthase-interacting protein OS=Xenopus tropicalis
GN=nosip PE=2 SV=1
Length = 298
Score = 161 bits (408), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 152/291 (52%), Gaps = 7/291 (2%)
Query: 4 RHSKNNNDLAFFTYDEKRK----LGYGTQKERLGKDSIKPFDACCLCLKPFIDPLCCQKG 59
RH KN A +TY EK+K GYGTQ RL KD++K FD CCL L+P DP+ G
Sbjct: 3 RHGKNCTAGAVYTYYEKKKDTAASGYGTQTVRLSKDAVKDFDCCCLSLQPCKDPVVTSDG 62
Query: 60 HIYCKECILECLLSQKKDIQRKLVAHAAQQKQEKEEEEERLMLQKARELDAFDQQNHGAV 119
+IY KE ILE +L QKK+I R++ A+ Q+ +K E +E K ++ AF + V
Sbjct: 63 YIYEKEAILEYILHQKKEIARQMKAYDKQKNAKKAEMDELNKAAKESQMKAFLDKEMTIV 122
Query: 120 PQYNDRNHSQDKNGFHGANSVKVTSYEEEALRTMKAFWLPSATPEAPVK-VEAPSASTIC 178
+ + + +G A EE + + +FW+PS TPEA V+ P + C
Sbjct: 123 SKPLNPFTRKSDSGADTAEPSGSQQSSEEKGKQLPSFWIPSLTPEAKTSLVKKPDKTVYC 182
Query: 179 PEGKEKLKLKSLFPVYFT--EDKSEEKKSSSNDKSFICPSCKVTLTNTLSLVALSSCGHV 236
P + LK+K L PV+FT ++K + + ++C + L N++ L G V
Sbjct: 183 PMSGKPLKMKDLIPVHFTAVDEKVDRVGLINRQDRYVCAVTRDMLGNSVPCAVLRPSGAV 242
Query: 237 FCKKCADKFMAVDKVCLVCNKPCKERNLVNVEKGGTGFAAHGDRLEARDFK 287
+C +K + D + + ER+++ +++GGTGF+ G L+A++ +
Sbjct: 243 VTMECVEKLIKKDMIDPISGDKLHERDIIMLQRGGTGFSGSGVLLQAKEAR 293
>sp|Q6NUH3|NOSIP_XENLA Nitric oxide synthase-interacting protein OS=Xenopus laevis
GN=nosip PE=2 SV=1
Length = 298
Score = 160 bits (406), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 151/293 (51%), Gaps = 7/293 (2%)
Query: 4 RHSKNNNDLAFFTYDEKRK----LGYGTQKERLGKDSIKPFDACCLCLKPFIDPLCCQKG 59
RH KN A +TY EK+K GYGTQ RL KD++K FD CCL L+P DP+ G
Sbjct: 3 RHGKNCTAGAVYTYYEKKKDTVASGYGTQTVRLSKDAVKDFDCCCLSLQPCKDPVVTSDG 62
Query: 60 HIYCKECILECLLSQKKDIQRKLVAHAAQQKQEKEEEEERLMLQKARELDAFDQQNHGAV 119
+IY KE ILE +L QKK+I R++ A+ Q+ +K E EE K ++ AF + V
Sbjct: 63 YIYEKESILEYILHQKKEIARQMKAYEKQKNSKKAEMEELNKAAKESKMKAFLDKEMTIV 122
Query: 120 PQYNDRNHSQDKNGFHGANSVKVTSYEEEALRTMKAFWLPSATPEAPVK-VEAPSASTIC 178
+ + + +G A EE + + +FW+PS TPEA V+ P + C
Sbjct: 123 SKPLNPFTRKSDSGIDAAEPSCSQQSSEEKNKQLPSFWIPSLTPEAKTSLVKKPDKTVYC 182
Query: 179 PEGKEKLKLKSLFPVYFT--EDKSEEKKSSSNDKSFICPSCKVTLTNTLSLVALSSCGHV 236
P LK+K L PV FT ++K + + ++C + L N++ L G V
Sbjct: 183 PMSGRPLKMKDLMPVNFTRVDEKVDRVGLINRQDRYVCAVTRDMLGNSVPCAVLRPSGAV 242
Query: 237 FCKKCADKFMAVDKVCLVCNKPCKERNLVNVEKGGTGFAAHGDRLEARDFKHL 289
+C +K + D + + ER+++ +++GGTGF+ G L+A++ + +
Sbjct: 243 VTMECVEKLIKKDMIDPISGDKLSERDIIMLQRGGTGFSGSGVLLQAKEARPV 295
>sp|Q4R7H4|NOSIP_MACFA Nitric oxide synthase-interacting protein OS=Macaca fascicularis
GN=NOSIP PE=2 SV=1
Length = 301
Score = 155 bits (393), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 156/293 (53%), Gaps = 16/293 (5%)
Query: 4 RHSKNNNDLAFFTYDEKRK----LGYGTQKERLGKDSIKPFDACCLCLKPFIDPLCCQKG 59
RH KN A +TY EK+K GYGTQ RL +D++K FD CCL L+P DP+ G
Sbjct: 3 RHGKNCTAGAVYTYHEKKKDTAASGYGTQNIRLSRDAVKDFDCCCLSLQPCHDPVVTPDG 62
Query: 60 HIYCKECILECLLSQKKDIQRKLVAHAAQQKQEKEEEEERLMLQKARELD---AFDQQNH 116
++Y +E ILE +L QKK+I R++ A+ Q+ +EE++E LQ+A D F ++
Sbjct: 63 YLYEREAILEYILHQKKEIARQMKAYEKQRGTRREEQKE---LQRAASQDHVRGFLEKES 119
Query: 117 GAVPQYNDRNHSQDKNGFHGANS---VKVTSYEEEALRTMKAFWLPSATPEA-PVKVEAP 172
V + + ++ +G N+ V ++ + + +FW+PS TPEA K+E P
Sbjct: 120 AIVSRPLNPFTAKALSGTSPDNAQPGPSVGPPSKDKDKVLPSFWIPSLTPEAKATKLEKP 179
Query: 173 SASTICPEGKEKLKLKSLFPVYFTEDKSEEKKSS--SNDKSFICPSCKVTLTNTLSLVAL 230
S + CP + L++ L PV+FT S + + + ++C + +L+N L
Sbjct: 180 SRTVTCPMSGKPLRMSDLTPVHFTPLDSSVDRVGLITRSERYVCAVTRDSLSNATPCAVL 239
Query: 231 SSCGHVFCKKCADKFMAVDKVCLVCNKPCKERNLVNVEKGGTGFAAHGDRLEA 283
G V +C +K + D V V +R+++ +++GGTGFA G +L+A
Sbjct: 240 RPSGAVVTLECVEKLIRKDMVDPVTGDKLTDRDIIVLQRGGTGFAGSGVKLQA 292
>sp|Q9Y314|NOSIP_HUMAN Nitric oxide synthase-interacting protein OS=Homo sapiens GN=NOSIP
PE=1 SV=1
Length = 301
Score = 154 bits (390), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 157/295 (53%), Gaps = 20/295 (6%)
Query: 4 RHSKNNNDLAFFTYDEKRK----LGYGTQKERLGKDSIKPFDACCLCLKPFIDPLCCQKG 59
RH KN A +TY EK+K GYGTQ RL +D++K FD CCL L+P DP+ G
Sbjct: 3 RHGKNCTAGAVYTYHEKKKDTAASGYGTQNIRLSRDAVKDFDCCCLSLQPCHDPVVTPDG 62
Query: 60 HIYCKECILECLLSQKKDIQRKLVAHAAQQKQEKEEEEERLMLQKARELD---AFDQQNH 116
++Y +E ILE +L QKK+I R++ A+ Q+ +EE++E LQ+A D F ++
Sbjct: 63 YLYEREAILEYILHQKKEIARQMKAYEKQRGTRREEQKE---LQRAASQDHVRGFLEKES 119
Query: 117 GAVPQYNDRNHSQDKNG-----FHGANSVKVTSYEEEALRTMKAFWLPSATPEA-PVKVE 170
V + + ++ +G SV S +++ + + +FW+PS TPEA K+E
Sbjct: 120 AIVSRPLNPFTAKALSGTSPDDVQPGPSVGPPSKDKD--KVLPSFWIPSLTPEAKATKLE 177
Query: 171 APSASTICPEGKEKLKLKSLFPVYFTEDKSEEKKSS--SNDKSFICPSCKVTLTNTLSLV 228
PS + CP + L++ L PV+FT S + + + ++C + +L+N
Sbjct: 178 KPSRTVTCPMSGKPLRMSDLTPVHFTPLDSSVDRVGLITRSERYVCAVTRDSLSNATPCA 237
Query: 229 ALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKERNLVNVEKGGTGFAAHGDRLEA 283
L G V +C +K + D V V +R+++ +++GGTGFA G +L+A
Sbjct: 238 VLRPSGAVVTLECVEKLIRKDMVDPVTGDKLTDRDIIVLQRGGTGFAGSGVKLQA 292
>sp|Q3SWY5|NOSIP_BOVIN Nitric oxide synthase-interacting protein OS=Bos taurus GN=NOSIP
PE=2 SV=1
Length = 302
Score = 153 bits (386), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/294 (32%), Positives = 154/294 (52%), Gaps = 17/294 (5%)
Query: 4 RHSKNNNDLAFFTYDEKRK----LGYGTQKERLGKDSIKPFDACCLCLKPFIDPLCCQKG 59
RH KN A +TY EK+K GYGTQ RL +D++K FD CCL L+P DP+ G
Sbjct: 3 RHGKNCTAGAVYTYHEKKKDTAASGYGTQNIRLSRDAVKDFDCCCLSLQPCHDPVVTPDG 62
Query: 60 HIYCKECILECLLSQKKDIQRKLVAHAAQQKQEKEEEEERLMLQKARELD---AFDQQNH 116
++Y +E ILE +L QKK+I R++ A+ Q+ +EE++E LQ+A D F ++
Sbjct: 63 YLYEREAILEYILHQKKEIARQMKAYEKQRGARREEQKE---LQRAAAQDHVRGFLEKEA 119
Query: 117 GAVPQYNDRNHSQDKNGFHGANSVKVTSYEEEAL----RTMKAFWLPSATPEA-PVKVEA 171
V + + + + +G + + S A + + +FW+PS TPEA K+E
Sbjct: 120 AIVSRPLNPFTPKAASAGNGPDDAQPGSSAGPAGKDKDKALPSFWIPSLTPEAKATKLEK 179
Query: 172 PSASTICPEGKEKLKLKSLFPVYFTEDKSEEKKSS--SNDKSFICPSCKVTLTNTLSLVA 229
PS CP + L++ L PV FT S + + + ++C + +L+N
Sbjct: 180 PSRIVTCPMSGKPLRMSDLTPVRFTPLDSSVDRVGLITRSERYVCAVTRDSLSNATPCAV 239
Query: 230 LSSCGHVFCKKCADKFMAVDKVCLVCNKPCKERNLVNVEKGGTGFAAHGDRLEA 283
L G V +C +K + D V V + +R+++ +++GGTGFA G +L+A
Sbjct: 240 LRPSGAVVTLECVEKLIRKDMVDPVTGEKLTDRDIIVLQRGGTGFAGSGVKLQA 293
>sp|Q5U3S7|NOSIP_DANRE Nitric oxide synthase-interacting protein OS=Danio rerio GN=nosip
PE=2 SV=1
Length = 304
Score = 152 bits (384), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 160/297 (53%), Gaps = 13/297 (4%)
Query: 4 RHSKNNNDLAFFTYDEKRK----LGYGTQKERLGKDSIKPFDACCLCLKPFIDPLCCQKG 59
RH KN A +TY EKRK GYGTQ RLGKD+IK FD C L L+P DP+ + G
Sbjct: 3 RHGKNCTAGAVYTYHEKRKDTAASGYGTQSVRLGKDAIKDFDCCSLSLQPCRDPVLTEDG 62
Query: 60 HIYCKECILECLLSQKKDIQRKLVAHAAQQKQEKEEEEERLMLQKARELDAFDQQNHGAV 119
++Y KE IL+ +L QK +I +K+ A+ Q++ K E + ++ + F Q+ + V
Sbjct: 63 YLYEKEAILQYILHQKTEIAKKMKAYEKQKQALKSEGQLESKSEERERAEKFKQRENNIV 122
Query: 120 -----PQYNDRNHSQ-DKNGFHGANSVKVTSYEEEALRTMKAFWLPSATPEA-PVKVEAP 172
P + ++ + ++NG ++S +S E + + +FW+PS TPEA P ++ P
Sbjct: 123 SKPINPFTSGKSKDEGNQNGSTSSSSTDTSSGESSSSSALPSFWIPSLTPEAKPTLLKKP 182
Query: 173 SASTICPEGKEKLKLKSLFPVYFTE-DKSEEKKS-SSNDKSFICPSCKVTLTNTLSLVAL 230
S + CP LK+ L V FT D S ++ + + ++C K TL N++ L
Sbjct: 183 SKTVSCPMSGRPLKMSDLITVRFTPLDPSLDRVALLTRQDRYVCAVTKDTLGNSVPCAVL 242
Query: 231 SSCGHVFCKKCADKFMAVDKVCLVCNKPCKERNLVNVEKGGTGFAAHGDRLEARDFK 287
G V +C +K + D V + KE++++ +++GGTGFA G L+A++ +
Sbjct: 243 RPSGVVVTMECVEKLIKKDMVDPITGDKLKEKDIIPIQRGGTGFAGSGVDLKAKEAR 299
>sp|Q9D6T0|NOSIP_MOUSE Nitric oxide synthase-interacting protein OS=Mus musculus GN=Nosip
PE=2 SV=1
Length = 301
Score = 150 bits (378), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/295 (32%), Positives = 152/295 (51%), Gaps = 20/295 (6%)
Query: 4 RHSKNNNDLAFFTYDEKRK----LGYGTQKERLGKDSIKPFDACCLCLKPFIDPLCCQKG 59
RH KN A +TY EK+K GYGTQ RL +D++K FD CCL L+P DP+ G
Sbjct: 3 RHGKNCTAGAVYTYHEKKKDTAASGYGTQNIRLSRDAVKDFDCCCLSLQPCHDPVVTPDG 62
Query: 60 HIYCKECILECLLSQKKDIQRKLVAHAAQQKQEKEEEEERLMLQKARELD---AFDQQNH 116
++Y +E ILE +L QK++I R++ A+ Q+ +EE++E LQ+A D F ++
Sbjct: 63 YLYEREAILEYILHQKREIARQVKAYEKQRGARREEQKE---LQRAAAQDQVRGFLEKEA 119
Query: 117 GAV-----PQYNDRNHSQDKNGFHGANSVKVTSYEEEALRTMKAFWLPSATPEA-PVKVE 170
V P + G SV +++ + + +FW+PS TPEA K+E
Sbjct: 120 AIVSRPLNPFMPKAATLPNTEGEQPGPSVGPVGKDKD--KALPSFWIPSLTPEAKATKLE 177
Query: 171 APSASTICPEGKEKLKLKSLFPVYFTE--DKSEEKKSSSNDKSFICPSCKVTLTNTLSLV 228
PS + CP + L++ L V FT+ D + + + ++C + +L+N
Sbjct: 178 KPSRTVTCPMSGKPLRMSDLTSVRFTQLDDSVDRVGLITRSERYVCAVTRDSLSNATPCA 237
Query: 229 ALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKERNLVNVEKGGTGFAAHGDRLEA 283
L G V +C +K + D V V ER+++ +++GGTGFA G +L+A
Sbjct: 238 VLRPSGAVVTLECVEKLIRKDMVDPVNGDTLTERDIIVLQRGGTGFAGSGVKLQA 292
>sp|Q9VWV8|NOSIP_DROME Nitric oxide synthase-interacting protein homolog OS=Drosophila
melanogaster GN=CG6179 PE=3 SV=1
Length = 307
Score = 133 bits (335), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 156/298 (52%), Gaps = 16/298 (5%)
Query: 4 RHSKNNNDLAFFTYDEKRK----LGYGTQKERLGKDSIKPFDACCLCLKPFIDPLCCQKG 59
RH++N A +TY+EK++ GYGT +RLGKDS+K FD C L L+P P+ + G
Sbjct: 3 RHARNCTAGAVYTYNEKKRDAAESGYGTNAQRLGKDSVKSFDCCSLTLQPCRRPVITKDG 62
Query: 60 HIYCKECILECLLSQKKDIQRKLVAHAAQQKQEKEE-EEERLMLQKARELDAFDQQNHGA 118
+++ KE IL+ ++++K + R+L + ++ E+++ +E Q+AR + +
Sbjct: 63 YLFDKEAILQYIVTKKNEYSRRLKEYERLRRAEEDKLSQEANSKQQARMERFVNAEKPAM 122
Query: 119 VPQYNDRNHSQDKNGFHGANSVKVTSYEEEALRTMK--------AFWLPSATPEAPV-KV 169
P ++ S+ + A + S ++ M +FWLPS P A + K
Sbjct: 123 TPAHSSAAASEKPSTSSAAAAASSESSSASSISNMTNGHEKKLPSFWLPSECPNAGLAKA 182
Query: 170 EAPSASTICPEGKEKLKLKSLFPVYFTEDKSEEKKSS--SNDKSFICPSCKVTLTNTLSL 227
+ P A+ CP ++ L++K L V FT K + K S + + ++CP L+N +
Sbjct: 183 QKPDATIYCPVSQKPLRVKDLIDVKFTLLKDGDTKRSLIAKEARYMCPITHDVLSNAVPC 242
Query: 228 VALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKERNLVNVEKGGTGFAAHGDRLEARD 285
L G V +C ++ + D + + ++ KE++++ +++GGTG+A D L+A++
Sbjct: 243 AVLRPTGDVVTMECVERLIRKDMIHPLTDRKLKEKDIIPLQRGGTGYATTNDHLQAKE 300
>sp|Q21755|NOSIP_CAEEL Nitric oxide synthase-interacting protein homolog OS=Caenorhabditis
elegans GN=R05G6.4 PE=3 SV=1
Length = 310
Score = 129 bits (324), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 141/295 (47%), Gaps = 25/295 (8%)
Query: 4 RHSKNNNDLAFFTYDEKRK----LGYGTQKERLGKDSIKPFDACCLCLKPFIDPLCCQKG 59
RH KN+ + +TY E+R+ GYGT RLG DSIK F C L L+P +P+ G
Sbjct: 3 RHGKNSTAASVYTYHERRRDAKASGYGTLHARLGADSIKEFHCCSLTLQPCRNPVISPTG 62
Query: 60 HIYCKECILECLLSQKKDIQRKLVAHAAQQKQE----KEEEEERLMLQKARELDAFDQ-- 113
+I+ +E ILE +L+QKK +KL + Q +E K E + K + A +
Sbjct: 63 YIFDREAILENILAQKKAYAKKLKEYEKQVAEESAAAKIAEGQAETFTKRTQFSAIESTP 122
Query: 114 QNHGAVPQYNDRNHSQDKNGFHGANSV--KVTSYEEEAL---------RTMKAFWLPSAT 162
GAV S + G + + KV ++ EE + ++ +FW+P
Sbjct: 123 SRTGAVATPRPEVGSLKRQGGVMSTEIAAKVKAHGEEGVMSNMKGDKSTSLPSFWIPELN 182
Query: 163 PEA-PVKVEAPSASTICPEGKEKLKLKSLFPVYFTEDKSEEKKSSSNDKSFICPSCKVTL 221
P A K+E PS+ +CP + +KLK L V FT E ++ + F+CP + L
Sbjct: 183 PTAVATKLEKPSSKVLCPVSGKPIKLKELLEVKFTPMPGTE---TAAHRKFLCPVTRDEL 239
Query: 222 TNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKERNLVNVEKGGTGFAA 276
TNT L V +K + D + + +P E +++ +++GGTG++A
Sbjct: 240 TNTTRCAYLKKSKSVVKYDVVEKLIKGDGIDPINGEPMSEDDIIELQRGGTGYSA 294
>sp|Q55DU4|NOSIP_DICDI Nitric oxide synthase-interacting protein homolog OS=Dictyostelium
discoideum GN=nosip PE=2 SV=1
Length = 333
Score = 71.2 bits (173), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 75/143 (52%), Gaps = 8/143 (5%)
Query: 153 MKAFWLPSATPEAPVK-VEAPSASTICP-EGKEKLKLKSLFPVYFTEDKSEEKKSSSNDK 210
+ ++W+ TP+ K +E P + T+CP +GK LK L V+FT K S+ ++
Sbjct: 192 LNSYWV--ITPDNKDKAIEKPRSYTVCPADGKHPLKSAQLINVHFTNVKPSSSDSNDSNN 249
Query: 211 SFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKF---MAVDKVCLVCNKPCKERNLVNV 267
+ CP C L+N+ L CGHVFC C DKF + C VC+KP E ++ +
Sbjct: 250 QYCCPICSKVLSNSTKTRLLKRCGHVFC-SCLDKFKEDSSSQLSCYVCDKPYTEDEIIQI 308
Query: 268 EKGGTGFAAHGDRLEARDFKHLG 290
GGTGF+ G LEA+ + H
Sbjct: 309 HSGGTGFSGSGSNLEAKKYTHTA 331
>sp|Q2TBT8|RN151_BOVIN RING finger protein 151 OS=Bos taurus GN=RNF151 PE=2 SV=1
Length = 240
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 206 SSNDKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKERNLV 265
S D +F+C C L + L C H+FCKKC +++A K C C K + R +V
Sbjct: 12 SPPDCNFLCSVCHGVLKRPVRL----PCSHIFCKKCILRWLARQKTCPCCRKEVRHRKMV 67
Query: 266 NVEK 269
+V K
Sbjct: 68 HVNK 71
>sp|Q2KHN1|RN151_HUMAN RING finger protein 151 OS=Homo sapiens GN=RNF151 PE=2 SV=1
Length = 245
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 205 SSSNDKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKERNL 264
+S D +F+C C L L C H+FCKKC +++A K C C K K + +
Sbjct: 11 ASPPDSNFVCSVCHGVLKRPARL----PCSHIFCKKCILRWLARQKTCPCCRKEVKRKKV 66
Query: 265 VNVEK 269
V++ K
Sbjct: 67 VHMNK 71
>sp|Q8RXD4|BRCA1_ARATH Protein BREAST CANCER SUSCEPTIBILITY 1 homolog OS=Arabidopsis
thaliana GN=BRCA1 PE=2 SV=1
Length = 941
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 38/84 (45%), Gaps = 13/84 (15%)
Query: 214 CPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKERNLVNVEKGGTG 273
CP C + +SL SC HVFC C K M +D C VC P R + +G
Sbjct: 16 CPICLSLYNSAVSL----SCNHVFCNACIVKSMKMDATCPVCKIPYHRREI----RG--- 64
Query: 274 FAAHGDRLEARDFKHLGSGSGLGL 297
A H D L +K++ SG+ L
Sbjct: 65 -APHMDSL-VSIYKNMEDASGIKL 86
>sp|Q5AXT6|PPIL2_EMENI Peptidyl-prolyl cis-trans isomerase-like 2 OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=cyp8 PE=3 SV=1
Length = 580
Score = 40.4 bits (93), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 17 YDEKRKLGYGTQKERLGKDSIK--PFDACCLCLKPFIDPLCCQKGHIYCKECILECL 71
Y G G + +G+ S K PF C L L+PF P+C Q G I+ IL +
Sbjct: 21 YSASAGAGVGKARRGVGEASFKRLPFRFCSLSLQPFEHPVCTQSGTIFDLTSILPWI 77
>sp|Q6CF78|BRE1_YARLI E3 ubiquitin-protein ligase BRE1 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=BRE1 PE=3 SV=1
Length = 700
Score = 40.4 bits (93), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 213 ICPSCKVTLTNTLSLVALSSCGHVFCKKCA-DKFMAVDKVCLVCNKPCKERNLVNV 267
+C C +T AL CGHVFC +CA D+ A + C CNKP + +L+ V
Sbjct: 647 MCSLCSKNWKDT----ALKVCGHVFCHQCAQDRLDARLRKCPNCNKPFSQNDLLTV 698
>sp|Q9CQ29|RN151_MOUSE RING finger protein 151 OS=Mus musculus GN=Rnf151 PE=1 SV=1
Length = 239
Score = 40.0 bits (92), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Query: 205 SSSNDKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKERNL 264
+S D F+C C L L C H+FCKKC +++A C C K R +
Sbjct: 11 ASPPDCKFLCSVCHGVLKRPTRL----PCSHIFCKKCIFRWLARQNTCPCCRKEVTRRKM 66
Query: 265 VNVEK 269
V V K
Sbjct: 67 VEVNK 71
>sp|Q6P9F5|TRI40_HUMAN Tripartite motif-containing protein 40 OS=Homo sapiens GN=TRIM40
PE=1 SV=3
Length = 258
Score = 39.3 bits (90), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 19/74 (25%)
Query: 208 NDKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKV-------CLVCNKPCK 260
N + +CP C+ +L +S ++CGH+FC+ C + V+K C +C KPC
Sbjct: 8 NQEEGVCPICQESLKEAVS----TNCGHLFCRVCLTQH--VEKASASGVFCCPLCRKPCS 61
Query: 261 ERNLVNVEKGGTGF 274
E L GTG+
Sbjct: 62 EEVL------GTGY 69
>sp|Q62191|RO52_MOUSE E3 ubiquitin-protein ligase TRIM21 OS=Mus musculus GN=Trim21 PE=1
SV=1
Length = 470
Score = 38.9 bits (89), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 42 ACCLCLKPFIDPLCCQKGHIYCKECILE 69
C +CL P ++P+ + GH +CKECI E
Sbjct: 19 TCSICLDPMVEPMSIECGHCFCKECIFE 46
>sp|Q1XHT8|TRI40_PANTR Tripartite motif-containing protein 40 OS=Pan troglodytes GN=TRIM40
PE=3 SV=1
Length = 229
Score = 38.9 bits (89), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 19/74 (25%)
Query: 208 NDKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKV-------CLVCNKPCK 260
N + +CP C+ +L +S ++CGH+FC+ C + V+K C +C KPC
Sbjct: 8 NQEEGVCPICQESLKEAVS----TNCGHLFCRVCLTQH--VEKASASGVFCCPLCRKPCS 61
Query: 261 ERNLVNVEKGGTGF 274
E L GTG+
Sbjct: 62 EEVL------GTGY 69
>sp|Q8HXH0|LONF3_MACFA LON peptidase N-terminal domain and RING finger protein 3 OS=Macaca
fascicularis GN=LONRF3 PE=2 SV=1
Length = 718
Score = 38.1 bits (87), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Query: 212 FICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCN 256
F C C L++ +SL SCGH FCK C ++ A D+ C +C
Sbjct: 156 FKCRKCHGFLSDPVSL----SCGHTFCKLCLERGRAADRRCALCG 196
Score = 32.7 bits (73), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Query: 40 FDA----CCLCLKPFIDPLCCQKGHIYCKECILECL 71
FDA C LC++ F +P+ GH +C +C+ CL
Sbjct: 419 FDASDLECALCMRLFYEPVTTPCGHTFCLKCLERCL 454
>sp|Q9D787|PPIL2_MOUSE Peptidyl-prolyl cis-trans isomerase-like 2 OS=Mus musculus
GN=Ppil2 PE=2 SV=2
Length = 521
Score = 38.1 bits (87), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 25 YGTQKERLGKDSIK--PFDACCLCLKPFIDPLCCQKGHIYCKECILECL 71
YG +K + + S + PFD C L L+PF+ P+C +G ++ I+ L
Sbjct: 22 YGGRKPDISQTSFRRLPFDHCSLSLQPFVYPVCTPEGVVFDLLNIVPWL 70
>sp|Q3UWZ0|TRI75_MOUSE Tripartite motif-containing protein 75 OS=Mus musculus GN=Trim75
PE=2 SV=1
Length = 467
Score = 37.7 bits (86), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 7/54 (12%)
Query: 214 CPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKV---CLVCNKPCKERNL 264
CP C LT+ +++ CGH FC+ C F A + C VC C+ RNL
Sbjct: 16 CPICLDDLTDPVTV----ECGHNFCRSCIKDFWAGQQATSSCPVCRHQCQHRNL 65
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/74 (22%), Positives = 33/74 (44%)
Query: 43 CCLCLKPFIDPLCCQKGHIYCKECILECLLSQKKDIQRKLVAHAAQQKQEKEEEEERLML 102
C +CL DP+ + GH +C+ CI + Q+ + H Q + + + M+
Sbjct: 16 CPICLDDLTDPVTVECGHNFCRSCIKDFWAGQQATSSCPVCRHQCQHRNLRSNAQLGNMI 75
Query: 103 QKARELDAFDQQNH 116
+ A+ L + + H
Sbjct: 76 ETAQLLQGMENKRH 89
>sp|Q496Y0|LONF3_HUMAN LON peptidase N-terminal domain and RING finger protein 3 OS=Homo
sapiens GN=LONRF3 PE=1 SV=1
Length = 759
Score = 37.7 bits (86), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Query: 212 FICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCN 256
F C C L++ +SL SCGH FCK C ++ A D+ C +C
Sbjct: 156 FKCRKCHGFLSDPVSL----SCGHTFCKLCLERGRAADRRCALCG 196
Score = 32.7 bits (73), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Query: 40 FDA----CCLCLKPFIDPLCCQKGHIYCKECILECL 71
FDA C LC++ F +P+ GH +C +C+ CL
Sbjct: 460 FDASDLECALCMRLFYEPVTTPCGHTFCLKCLERCL 495
>sp|Q00940|PEX10_PICAN Peroxisome biogenesis factor 10 OS=Pichia angusta GN=PEX10 PE=3
SV=1
Length = 295
Score = 37.0 bits (84), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 42 ACCLCLKPFIDPLCCQKGHIYCKECILECL 71
C LCL P DP C + GH++C +C+L+ +
Sbjct: 244 TCMLCLSPMKDPSCGECGHVFCWKCVLDWV 273
>sp|Q6K4V3|C3H15_ORYSJ Zinc finger CCCH domain-containing protein 15 OS=Oryza sativa
subsp. japonica GN=Os02g0301000 PE=2 SV=1
Length = 326
Score = 37.0 bits (84), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Query: 212 FICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKP 258
F C C+ + + ++ C H FC+ CA K + +K C VCNKP
Sbjct: 263 FACYICREPFVDPV----VTKCKHYFCEHCALKHHSKNKKCFVCNKP 305
Score = 34.3 bits (77), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 39 PFDACCLCLKPFIDPLCCQKGHIYCKECILE 69
PF AC +C +PF+DP+ + H +C+ C L+
Sbjct: 262 PF-ACYICREPFVDPVVTKCKHYFCEHCALK 291
>sp|Q6CWM4|BRE1_KLULA E3 ubiquitin-protein ligase BRE1 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=BRE1 PE=3 SV=1
Length = 663
Score = 37.0 bits (84), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 214 CPSCKVTLTNTLSLVALSSCGHVFCKK-CADKFMAVDKVCLVCNKPCKERNLVNV 267
C C NT AL +CGHVFC C ++ A + C CNKP +L+++
Sbjct: 611 CSLCSKNWKNT----ALKTCGHVFCDVCCKERLAARMRKCPTCNKPFSSNDLLSI 661
>sp|Q3UWA4|TRI40_MOUSE Tripartite motif-containing protein 40 OS=Mus musculus GN=Trim40
PE=2 SV=1
Length = 246
Score = 37.0 bits (84), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 34/87 (39%), Gaps = 15/87 (17%)
Query: 205 SSSNDKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKV-----CLVCNKPC 259
S D ICP C L +S + C H+FC+ C + M V C VC KPC
Sbjct: 3 SLDKDNQDICPICLDPLKEAVS----TDCRHLFCRMCLTQHMDKASVSGILSCPVCRKPC 58
Query: 260 KERNLVNVEKGGTGFAAHGDRLEARDF 286
E L G + H + R F
Sbjct: 59 SEGVL------GDNYICHTHQKRVRRF 79
>sp|P19474|RO52_HUMAN E3 ubiquitin-protein ligase TRIM21 OS=Homo sapiens GN=TRIM21 PE=1
SV=1
Length = 475
Score = 37.0 bits (84), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 19/26 (73%)
Query: 42 ACCLCLKPFIDPLCCQKGHIYCKECI 67
C +CL PF++P+ + GH +C+ECI
Sbjct: 15 TCPICLDPFVEPVSIECGHSFCQECI 40
>sp|Q7S304|BRE1_NEUCR E3 ubiquitin-protein ligase bre-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=bre-1 PE=3 SV=1
Length = 707
Score = 37.0 bits (84), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Query: 212 FICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVD-KVCLVCNKP 258
+C C+ NT+ L CGHVFC +C D +A + C CNK
Sbjct: 653 VLCSVCRSNFKNTI----LKGCGHVFCNECVDNRLANRMRKCPSCNKA 696
>sp|Q6FWF3|BRE1_CANGA E3 ubiquitin-protein ligase BRE1 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=BRE1 PE=3 SV=1
Length = 693
Score = 36.6 bits (83), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 228 VALSSCGHVFCKK-CADKFMAVDKVCLVCNKPCKERNLVNV 267
+A+ +CGHVFC+ C ++ A + C CNKP +L+ V
Sbjct: 651 MAIRTCGHVFCEDCCKERLAARMRKCPTCNKPFSSNDLLMV 691
>sp|Q7YRV4|RO52_BOVIN E3 ubiquitin-protein ligase TRIM21 OS=Bos taurus GN=TRIM21 PE=2
SV=1
Length = 469
Score = 36.6 bits (83), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 42 ACCLCLKPFIDPLCCQKGHIYCKECILE 69
C +CL P ++P+ + GH +C+ECI E
Sbjct: 15 TCSICLDPMVEPMSIECGHSFCQECISE 42
>sp|Q4WDD7|BRE1_ASPFU E3 ubiquitin-protein ligase bre1 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=bre1
PE=3 SV=2
Length = 725
Score = 36.6 bits (83), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Query: 213 ICPSCKVTLTNTLSLVALSSCGHVFCKKCA-DKFMAVDKVCLVCNK 257
+C C+ NT A+ +CGHVFCK+C ++ + + C CN+
Sbjct: 672 LCTVCRRNFKNT----AIKTCGHVFCKECVEERLTSRSRKCPNCNR 713
Score = 32.0 bits (71), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 37 IKPFDACCLCLKPFIDPLCCQKGHIYCKECILECLLSQKK 76
++ C +C + F + GH++CKEC+ E L S+ +
Sbjct: 667 LRSLALCTVCRRNFKNTAIKTCGHVFCKECVEERLTSRSR 706
>sp|C8VCP8|PEX12_EMENI Peroxisome assembly protein 12 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=PEX12
PE=3 SV=1
Length = 489
Score = 36.2 bits (82), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 42 ACCLCLKPFIDPLCCQKGHIYCKECILECL 71
+C +CL +P CQ G++YC CI L
Sbjct: 383 SCPVCLNQLTNPTACQTGYVYCYVCIFHWL 412
>sp|Q9ET67|PEX12_CRILO Peroxisome assembly protein 12 OS=Cricetulus longicaudatus GN=PEX12
PE=2 SV=1
Length = 359
Score = 36.2 bits (82), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 213 ICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKERNLVNV 267
+CP C+ T N L++ G+VFC +C ++ + C + P + ++L+ +
Sbjct: 303 VCPLCRKTRVND---TVLATSGYVFCYRCVFNYVRSHQACPITGYPTEVQHLIKL 354
>sp|Q8VC48|PEX12_MOUSE Peroxisome assembly protein 12 OS=Mus musculus GN=Pex12 PE=2 SV=1
Length = 359
Score = 36.2 bits (82), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 213 ICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKERNLVNV 267
+CP C+ T N L++ G+VFC +C ++ + C + P + ++L+ +
Sbjct: 303 VCPLCRKTRVND---TVLATSGYVFCYRCVFNYVRSHQACPITGYPTEVQHLIKL 354
>sp|O00623|PEX12_HUMAN Peroxisome assembly protein 12 OS=Homo sapiens GN=PEX12 PE=1 SV=1
Length = 359
Score = 36.2 bits (82), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 213 ICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKERNLVNV 267
+CP C+ T N L++ G+VFC +C ++ + C + P + ++L+ +
Sbjct: 303 VCPLCRKTRVND---TVLATSGYVFCYRCVFHYVRSHQACPITGYPTEVQHLIKL 354
>sp|Q9D4H7|LONF3_MOUSE LON peptidase N-terminal domain and RING finger protein 3 OS=Mus
musculus GN=Lonrf3 PE=2 SV=1
Length = 753
Score = 35.8 bits (81), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 212 FICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVC 255
F C C L++ +SL CGH FCK C ++ A D+ C +C
Sbjct: 157 FKCKKCHGFLSDPVSLW----CGHTFCKLCLERGRAADRRCALC 196
Score = 32.3 bits (72), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Query: 35 DSIKPFDA----CCLCLKPFIDPLCCQKGHIYCKECILECL 71
+ + FDA C LC++ F +P+ GH +C +C+ CL
Sbjct: 449 NPLGSFDASDLECSLCMRLFYEPVTTPCGHTFCLKCLERCL 489
>sp|Q8GX84|C3H1_ARATH Zinc finger CCCH domain-containing protein 1 OS=Arabidopsis
thaliana GN=At1g01350 PE=2 SV=2
Length = 343
Score = 35.4 bits (80), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 39 PFDACCLCLKPFIDPLCCQKGHIYCKECILECLLSQKK 76
PF AC +C +PF+DP+ + H +C+ C L+ KK
Sbjct: 274 PF-ACFICREPFVDPVVTKCKHYFCEHCALKHHTKNKK 310
Score = 35.4 bits (80), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Query: 212 FICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKP 258
F C C+ + + ++ C H FC+ CA K +K C VCN+P
Sbjct: 275 FACFICREPFVDPV----VTKCKHYFCEHCALKHHTKNKKCFVCNQP 317
>sp|Q2U9B0|BRE1_ASPOR E3 ubiquitin-protein ligase bre1 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=bre1 PE=3 SV=1
Length = 760
Score = 35.4 bits (80), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 5/46 (10%)
Query: 213 ICPSCKVTLTNTLSLVALSSCGHVFCKKCA-DKFMAVDKVCLVCNK 257
+C C+ NT A+ +CGHVFCK C ++ + + C CN+
Sbjct: 707 LCTVCRRNFKNT----AIKTCGHVFCKDCVEERLTSRSRKCPNCNR 748
>sp|Q10154|RTF2_SCHPO Replication termination factor 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rtf2 PE=1 SV=1
Length = 240
Score = 35.4 bits (80), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 212 FICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKERNLVNVEKGG 271
++CP + +++T + CGHVF +F +K+C CN+ +E++++ +
Sbjct: 103 WLCPITRHVMSDTYQFAYIVPCGHVFEYSALKQFG--EKMCFQCNQVYEEKDVIPINPNA 160
Query: 272 TGFAAHGDRL 281
RL
Sbjct: 161 EQLKTLSKRL 170
>sp|Q8IZP6|R113B_HUMAN RING finger protein 113B OS=Homo sapiens GN=RNF113B PE=1 SV=3
Length = 322
Score = 35.4 bits (80), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 197 EDKSEEKKSSSNDKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCN 256
ED++ E S + F C C+ N + ++ C H FC+ CA + C +C+
Sbjct: 239 EDENHEVGSEEEEIPFRCFICRQAFQNPV----VTKCRHYFCESCALEHFRATPRCYICD 294
Query: 257 KP 258
+P
Sbjct: 295 QP 296
>sp|Q9FNG6|C3H51_ARATH Zinc finger CCCH domain-containing protein 51 OS=Arabidopsis
thaliana GN=At5g06420 PE=2 SV=1
Length = 378
Score = 35.4 bits (80), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 39 PFDACCLCLKPFIDPLCCQKGHIYCKECILECLLSQKK 76
PF AC +C +PF+DP+ + H +C+ C L+ KK
Sbjct: 309 PF-ACFICREPFLDPVVTKCKHYFCEHCALKHHTKNKK 345
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Query: 212 FICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKP 258
F C C+ + + ++ C H FC+ CA K +K C VCN+P
Sbjct: 310 FACFICREPFLDPV----VTKCKHYFCEHCALKHHTKNKKCFVCNQP 352
>sp|A6NI03|TR64B_HUMAN Putative tripartite motif-containing protein 64B OS=Homo sapiens
GN=TRIM64B PE=5 SV=3
Length = 449
Score = 35.4 bits (80), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 43 CCLCLKPFIDPLCCQKGHIYCKECILEC 70
CC+C+ FIDP+ GH +C+ C+ C
Sbjct: 15 CCICVNYFIDPVTIDCGHSFCRPCLCLC 42
>sp|Q6MFY8|TRI40_RAT Tripartite motif-containing protein 40 OS=Rattus norvegicus
GN=Trim40 PE=3 SV=1
Length = 247
Score = 35.4 bits (80), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 9/61 (14%)
Query: 209 DKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKV-----CLVCNKPCKERN 263
D ICP C L +S + C H+FC+ C + M V C VC KPC E
Sbjct: 7 DNQDICPICLDPLKEAVS----TDCRHLFCRMCLIRHMDKASVSGVLSCPVCRKPCSETV 62
Query: 264 L 264
L
Sbjct: 63 L 63
>sp|A6NGJ6|TRI64_HUMAN Tripartite motif-containing protein 64 OS=Homo sapiens GN=TRIM64
PE=2 SV=4
Length = 449
Score = 35.4 bits (80), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 43 CCLCLKPFIDPLCCQKGHIYCKECILEC 70
CC+C+ FIDP+ GH +C+ C+ C
Sbjct: 15 CCICVNYFIDPVTIDCGHSFCRPCLCLC 42
>sp|Q5AVC5|CWC24_EMENI Pre-mRNA-splicing factor cwc24 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=cwc24
PE=3 SV=1
Length = 332
Score = 35.0 bits (79), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 39 PFDACCLCLKPFIDPLCCQKGHIYCKECILE 69
PF AC +C KP+ +P+ + GH +C+ C L+
Sbjct: 238 PF-ACIICKKPYQNPIVTKCGHYFCESCALQ 267
>sp|A0JN74|TRI11_BOVIN E3 ubiquitin-protein ligase TRIM11 OS=Bos taurus GN=TRIM11 PE=2
SV=1
Length = 468
Score = 35.0 bits (79), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 43 CCLCLKPFIDPLCCQKGHIYCKECILEC 70
C +CL F DP+ GH +C+ECI C
Sbjct: 16 CAICLDYFTDPVMTDCGHNFCRECIRRC 43
>sp|P62603|TRI26_RAT Tripartite motif-containing protein 26 OS=Rattus norvegicus
GN=Trim26 PE=2 SV=1
Length = 542
Score = 34.7 bits (78), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Query: 207 SNDKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVD---KVCLVCNKPCKERN 263
S ++ C C L + +++ CGHVFC+ C + VC +C KP K+ N
Sbjct: 9 SLEEEVTCSICLDYLRDPVTI----DCGHVFCRSCTSDIRPISGNRPVCPLCKKPFKKEN 64
Query: 264 LVNV 267
+ V
Sbjct: 65 IRPV 68
>sp|B1H278|TRI11_RAT E3 ubiquitin-protein ligase TRIM11 OS=Rattus norvegicus GN=Trim11
PE=2 SV=1
Length = 467
Score = 34.7 bits (78), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 42 ACCLCLKPFIDPLCCQKGHIYCKECILEC 70
C +CL F DP+ GH +C+ECI C
Sbjct: 15 TCAICLDYFTDPVMTDCGHNFCRECIRRC 43
>sp|Q96F44|TRI11_HUMAN E3 ubiquitin-protein ligase TRIM11 OS=Homo sapiens GN=TRIM11 PE=1
SV=2
Length = 468
Score = 34.7 bits (78), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 43 CCLCLKPFIDPLCCQKGHIYCKECILEC 70
C +CL F DP+ GH +C+ECI C
Sbjct: 16 CAICLDYFTDPVMTDCGHNFCRECIRRC 43
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 119,139,308
Number of Sequences: 539616
Number of extensions: 5087513
Number of successful extensions: 23808
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 170
Number of HSP's successfully gapped in prelim test: 285
Number of HSP's that attempted gapping in prelim test: 23211
Number of HSP's gapped (non-prelim): 838
length of query: 304
length of database: 191,569,459
effective HSP length: 117
effective length of query: 187
effective length of database: 128,434,387
effective search space: 24017230369
effective search space used: 24017230369
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)