Query 022029
Match_columns 304
No_of_seqs 207 out of 1217
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 12:55:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022029.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022029hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4ap4_A E3 ubiquitin ligase RNF 99.7 1.4E-17 4.8E-22 135.8 5.7 81 176-268 49-132 (133)
2 2djb_A Polycomb group ring fin 99.3 4.4E-12 1.5E-16 93.5 5.6 61 208-271 12-72 (72)
3 2bay_A PRE-mRNA splicing facto 99.2 5.7E-12 1.9E-16 90.9 4.7 33 41-73 4-37 (61)
4 1g25_A CDK-activating kinase a 99.2 1.4E-11 4.9E-16 88.9 5.0 58 211-268 3-62 (65)
5 2ect_A Ring finger protein 126 99.2 1.2E-11 4.2E-16 92.2 4.5 65 209-274 13-77 (78)
6 3ng2_A RNF4, snurf, ring finge 99.2 1.4E-11 4.8E-16 90.0 3.5 60 209-268 8-70 (71)
7 2xeu_A Ring finger protein 4; 99.1 2.4E-11 8.4E-16 86.6 3.7 58 211-268 3-63 (64)
8 2kre_A Ubiquitin conjugation f 99.1 6.5E-11 2.2E-15 93.5 6.0 55 209-267 27-81 (100)
9 1t1h_A Gspef-atpub14, armadill 99.1 6.9E-11 2.4E-15 88.1 5.2 54 209-266 6-60 (78)
10 2yur_A Retinoblastoma-binding 99.1 5.2E-11 1.8E-15 88.3 4.1 59 209-271 13-74 (74)
11 2d8t_A Dactylidin, ring finger 99.1 2.4E-11 8.1E-16 89.3 2.2 58 209-270 13-70 (71)
12 2ecy_A TNF receptor-associated 99.1 9.2E-11 3.1E-15 84.8 5.2 52 209-264 13-65 (66)
13 2ckl_B Ubiquitin ligase protei 99.1 2.9E-11 1E-15 103.0 2.7 79 209-290 52-142 (165)
14 2kr4_A Ubiquitin conjugation f 99.1 9.1E-11 3.1E-15 89.8 4.7 55 209-267 12-66 (85)
15 2ct2_A Tripartite motif protei 99.1 1.3E-10 4.5E-15 88.1 5.0 61 208-268 12-75 (88)
16 2ysl_A Tripartite motif-contai 99.0 1.9E-10 6.4E-15 84.4 5.4 52 209-264 18-72 (73)
17 2bay_A PRE-mRNA splicing facto 99.0 9.8E-11 3.3E-15 84.4 3.0 57 211-270 3-59 (61)
18 2ea6_A Ring finger protein 4; 99.0 1.7E-10 5.9E-15 83.4 4.4 54 208-261 12-68 (69)
19 1wgm_A Ubiquitin conjugation f 99.0 2.8E-10 9.6E-15 89.5 5.9 55 209-267 20-75 (98)
20 2ep4_A Ring finger protein 24; 99.0 3.4E-10 1.2E-14 83.4 5.8 60 209-271 13-72 (74)
21 2ecw_A Tripartite motif-contai 99.0 3.6E-10 1.2E-14 84.8 5.9 55 209-267 17-77 (85)
22 2ecm_A Ring finger and CHY zin 99.0 2.2E-10 7.5E-15 79.5 4.3 52 209-260 3-54 (55)
23 2csy_A Zinc finger protein 183 99.0 3.6E-10 1.2E-14 84.9 5.9 49 208-260 12-60 (81)
24 1x4j_A Ring finger protein 38; 99.0 5.3E-10 1.8E-14 82.8 6.1 68 186-261 5-72 (75)
25 2ecn_A Ring finger protein 141 99.0 1E-10 3.5E-15 85.4 1.8 58 209-271 13-70 (70)
26 3ztg_A E3 ubiquitin-protein li 99.0 6.4E-10 2.2E-14 85.4 6.1 54 208-265 10-67 (92)
27 3lrq_A E3 ubiquitin-protein li 99.0 3.1E-10 1.1E-14 89.0 3.5 56 209-267 20-76 (100)
28 2egp_A Tripartite motif-contai 99.0 2E-10 6.9E-15 85.4 2.3 54 208-265 9-69 (79)
29 1iym_A EL5; ring-H2 finger, ub 98.9 4.4E-10 1.5E-14 78.0 3.8 52 209-260 3-54 (55)
30 2ecv_A Tripartite motif-contai 98.9 4.7E-10 1.6E-14 84.1 3.9 54 209-266 17-76 (85)
31 4ap4_A E3 ubiquitin ligase RNF 98.9 5.8E-10 2E-14 90.3 4.6 63 209-271 5-70 (133)
32 2y43_A E3 ubiquitin-protein li 98.9 4.6E-10 1.6E-14 87.5 3.7 54 210-266 21-74 (99)
33 1chc_A Equine herpes virus-1 r 98.9 1E-09 3.5E-14 79.4 5.0 60 210-274 4-63 (68)
34 1e4u_A Transcriptional repress 98.9 1.5E-09 5.2E-14 81.8 4.8 68 208-275 8-76 (78)
35 2ckl_A Polycomb group ring fin 98.9 1.2E-09 4.2E-14 86.5 4.3 51 209-262 13-63 (108)
36 2ysj_A Tripartite motif-contai 98.9 2.3E-09 8E-14 76.5 5.2 43 209-255 18-63 (63)
37 2yu4_A E3 SUMO-protein ligase 98.9 1.2E-09 4.2E-14 84.9 4.0 55 209-266 5-68 (94)
38 2kiz_A E3 ubiquitin-protein li 98.9 2.8E-09 9.5E-14 77.4 5.6 52 209-261 12-63 (69)
39 4ayc_A E3 ubiquitin-protein li 98.8 1.2E-09 4.2E-14 90.4 3.8 47 211-261 53-99 (138)
40 1v87_A Deltex protein 2; ring- 98.8 2.9E-09 9.8E-14 84.9 5.2 60 211-272 25-103 (114)
41 3fl2_A E3 ubiquitin-protein li 98.8 2E-09 7E-14 87.3 4.2 48 210-261 51-99 (124)
42 1jm7_A BRCA1, breast cancer ty 98.8 1.7E-09 5.8E-14 85.6 3.5 54 210-267 20-76 (112)
43 2l0b_A E3 ubiquitin-protein li 98.8 3.6E-09 1.2E-13 81.5 5.1 52 209-261 38-89 (91)
44 3hct_A TNF receptor-associated 98.8 2.1E-09 7E-14 86.7 3.6 54 209-266 16-70 (118)
45 2c2l_A CHIP, carboxy terminus 98.8 2E-09 6.7E-14 97.6 3.1 53 210-266 207-260 (281)
46 2f42_A STIP1 homology and U-bo 98.8 4.6E-09 1.6E-13 91.2 4.5 55 209-267 104-159 (179)
47 1z6u_A NP95-like ring finger p 98.7 4.8E-09 1.7E-13 88.4 4.3 50 210-263 77-127 (150)
48 1rmd_A RAG1; V(D)J recombinati 98.7 3.3E-09 1.1E-13 84.9 3.1 53 210-266 22-75 (116)
49 2ecj_A Tripartite motif-contai 98.7 5.8E-09 2E-13 72.8 3.8 43 209-255 13-58 (58)
50 2kr4_A Ubiquitin conjugation f 98.7 1.6E-08 5.6E-13 77.1 5.5 36 37-72 11-46 (85)
51 2yu4_A E3 SUMO-protein ligase 98.7 1.5E-08 5.2E-13 78.6 5.2 34 40-73 7-41 (94)
52 2kre_A Ubiquitin conjugation f 98.7 1.5E-08 5E-13 79.9 4.6 37 36-72 25-61 (100)
53 1wgm_A Ubiquitin conjugation f 98.6 2.4E-08 8.2E-13 78.3 5.1 36 37-72 19-55 (98)
54 1jm7_B BARD1, BRCA1-associated 98.6 3.9E-09 1.3E-13 84.9 0.3 51 210-265 21-71 (117)
55 3hcs_A TNF receptor-associated 98.6 1.5E-08 5.2E-13 86.3 3.5 54 209-266 16-70 (170)
56 2vje_B MDM4 protein; proto-onc 98.6 1.7E-08 5.9E-13 72.7 3.1 55 210-268 6-61 (63)
57 2ecl_A Ring-box protein 2; RNF 98.6 1.3E-08 4.3E-13 76.9 2.3 50 213-262 17-77 (81)
58 2vje_A E3 ubiquitin-protein li 98.6 2.6E-08 8.8E-13 72.0 3.8 55 210-268 7-62 (64)
59 3l11_A E3 ubiquitin-protein li 98.6 9.2E-09 3.1E-13 82.2 1.4 48 209-260 13-61 (115)
60 3htk_C E3 SUMO-protein ligase 98.6 1.8E-08 6.1E-13 92.1 3.2 55 209-266 179-237 (267)
61 2y1n_A E3 ubiquitin-protein li 98.6 2.1E-08 7.2E-13 96.5 3.3 56 210-269 331-387 (389)
62 3knv_A TNF receptor-associated 98.5 1.2E-08 4.1E-13 85.1 0.5 49 209-261 29-78 (141)
63 2f42_A STIP1 homology and U-bo 98.5 9E-08 3.1E-12 83.1 5.4 38 35-72 101-138 (179)
64 1t1h_A Gspef-atpub14, armadill 98.5 1.4E-07 4.7E-12 69.9 5.6 39 34-72 2-40 (78)
65 1bor_A Transcription factor PM 98.5 2E-08 6.7E-13 70.5 0.6 46 209-261 4-49 (56)
66 2ea5_A Cell growth regulator w 98.5 1.2E-07 4E-12 69.4 4.8 55 209-273 13-68 (68)
67 2ecg_A Baculoviral IAP repeat- 98.4 8.8E-08 3E-12 71.0 2.7 44 210-261 24-68 (75)
68 2c2l_A CHIP, carboxy terminus 98.4 1.8E-07 6.3E-12 84.5 4.9 37 36-72 204-240 (281)
69 4ic3_A E3 ubiquitin-protein li 98.4 1.2E-07 4E-12 70.3 2.1 44 210-261 23-67 (74)
70 1wim_A KIAA0161 protein; ring 98.4 1.1E-07 3.8E-12 73.3 2.1 58 209-267 3-72 (94)
71 3dpl_R Ring-box protein 1; ubi 98.3 5.9E-07 2E-11 71.4 4.6 49 212-260 38-100 (106)
72 2yho_A E3 ubiquitin-protein li 98.1 8.9E-07 3.1E-11 66.5 2.0 48 211-268 18-66 (79)
73 4a0k_B E3 ubiquitin-protein li 98.0 6.3E-07 2.2E-11 72.6 0.0 50 212-261 49-112 (117)
74 3hcs_A TNF receptor-associated 98.0 2.3E-06 7.7E-11 72.7 2.6 37 36-72 14-50 (170)
75 2djb_A Polycomb group ring fin 98.0 1.6E-05 5.6E-10 57.8 6.4 38 35-72 10-48 (72)
76 2yur_A Retinoblastoma-binding 97.9 1.1E-05 3.8E-10 59.2 4.7 41 33-73 8-49 (74)
77 2ecy_A TNF receptor-associated 97.9 1.2E-05 4E-10 57.6 4.5 35 37-71 12-46 (66)
78 2ecj_A Tripartite motif-contai 97.9 1E-05 3.5E-10 55.9 3.7 38 35-72 10-47 (58)
79 3htk_C E3 SUMO-protein ligase 97.9 3E-06 1E-10 77.4 1.1 35 37-71 178-213 (267)
80 3lrq_A E3 ubiquitin-protein li 97.9 1.2E-05 4.2E-10 62.5 4.4 37 37-73 19-56 (100)
81 3ng2_A RNF4, snurf, ring finge 97.8 1.4E-05 4.6E-10 57.7 4.2 33 40-72 10-49 (71)
82 2ysj_A Tripartite motif-contai 97.8 2.1E-05 7.3E-10 55.5 4.9 38 36-73 16-53 (63)
83 3t6p_A Baculoviral IAP repeat- 97.8 3.6E-06 1.2E-10 79.9 0.6 48 210-267 294-342 (345)
84 2csy_A Zinc finger protein 183 97.8 3E-05 1E-09 57.6 5.0 36 37-72 12-47 (81)
85 2d8s_A Cellular modulator of i 97.7 2.2E-05 7.7E-10 59.1 4.2 53 209-263 13-72 (80)
86 2ecv_A Tripartite motif-contai 97.7 7.5E-05 2.6E-09 55.2 7.0 38 36-73 15-52 (85)
87 2ecw_A Tripartite motif-contai 97.7 0.00012 4.1E-09 54.1 8.1 38 36-73 15-52 (85)
88 2xeu_A Ring finger protein 4; 97.7 2.1E-05 7.1E-10 55.3 3.5 32 41-72 4-42 (64)
89 3vk6_A E3 ubiquitin-protein li 97.7 2.5E-05 8.6E-10 61.1 3.5 46 213-261 3-49 (101)
90 3hct_A TNF receptor-associated 97.6 4.8E-05 1.6E-09 60.8 4.9 37 36-72 14-50 (118)
91 1jm7_A BRCA1, breast cancer ty 97.6 2.6E-05 9E-10 61.2 3.0 33 40-72 21-53 (112)
92 3ztg_A E3 ubiquitin-protein li 97.6 4.4E-05 1.5E-09 58.0 3.8 40 35-74 8-48 (92)
93 2ct2_A Tripartite motif protei 97.6 8.6E-05 2.9E-09 55.5 5.1 45 30-74 5-53 (88)
94 2d8t_A Dactylidin, ring finger 97.6 5E-05 1.7E-09 55.0 3.6 36 37-72 12-47 (71)
95 1z6u_A NP95-like ring finger p 97.5 7.4E-05 2.5E-09 62.6 5.0 34 39-72 77-110 (150)
96 1g25_A CDK-activating kinase a 97.5 7.5E-05 2.6E-09 53.1 4.0 32 41-72 4-40 (65)
97 2ct0_A Non-SMC element 1 homol 97.5 8.3E-05 2.8E-09 55.3 4.4 49 210-261 14-64 (74)
98 2ysl_A Tripartite motif-contai 97.5 6E-05 2.1E-09 54.5 3.3 36 37-72 17-52 (73)
99 1rmd_A RAG1; V(D)J recombinati 97.5 9E-05 3.1E-09 58.8 4.4 33 40-72 23-55 (116)
100 4ayc_A E3 ubiquitin-protein li 97.4 5.4E-05 1.8E-09 62.2 2.5 31 42-72 55-85 (138)
101 2ea6_A Ring finger protein 4; 97.4 8.7E-05 3E-09 52.8 3.2 39 35-73 10-55 (69)
102 2ckl_B Ubiquitin ligase protei 97.4 0.00013 4.3E-09 61.5 4.5 37 36-72 50-87 (165)
103 3fl2_A E3 ubiquitin-protein li 97.3 0.00011 3.8E-09 59.0 3.2 34 39-72 51-84 (124)
104 2ckl_A Polycomb group ring fin 97.2 5.9E-05 2E-09 59.2 0.8 37 36-72 11-48 (108)
105 2egp_A Tripartite motif-contai 97.2 4.8E-05 1.7E-09 55.8 -0.3 37 37-73 9-45 (79)
106 2y43_A E3 ubiquitin-protein li 97.1 0.00027 9.3E-09 54.4 3.2 35 38-72 20-55 (99)
107 3knv_A TNF receptor-associated 97.1 0.00023 7.9E-09 59.0 2.9 36 37-72 28-63 (141)
108 3l11_A E3 ubiquitin-protein li 97.0 0.00012 4E-09 58.0 0.0 37 37-73 12-48 (115)
109 2ep4_A Ring finger protein 24; 96.9 0.001 3.5E-08 48.1 4.8 36 38-73 13-51 (74)
110 2ect_A Ring finger protein 126 96.9 0.0011 3.6E-08 48.6 4.4 37 36-72 11-50 (78)
111 2ecm_A Ring finger and CHY zin 96.8 0.0009 3.1E-08 45.4 3.5 34 40-73 5-42 (55)
112 1v87_A Deltex protein 2; ring- 96.8 0.00056 1.9E-08 53.8 2.5 32 41-72 26-75 (114)
113 1chc_A Equine herpes virus-1 r 96.8 0.0008 2.7E-08 47.8 3.0 32 41-72 6-38 (68)
114 2kiz_A E3 ubiquitin-protein li 96.7 0.0015 5.2E-08 46.5 4.4 37 37-73 11-50 (69)
115 1jm7_B BARD1, BRCA1-associated 96.7 0.00028 9.6E-09 56.1 0.5 35 38-72 20-55 (117)
116 1bor_A Transcription factor PM 96.7 0.00057 2E-08 47.3 1.8 31 39-69 5-35 (56)
117 2ecn_A Ring finger protein 141 96.7 0.0011 3.7E-08 47.5 3.3 35 37-72 12-46 (70)
118 1vyx_A ORF K3, K3RING; zinc-bi 96.5 0.0029 9.9E-08 44.8 4.5 48 210-261 5-59 (60)
119 1x4j_A Ring finger protein 38; 96.3 0.0023 7.8E-08 46.5 3.1 36 38-73 21-59 (75)
120 2l0b_A E3 ubiquitin-protein li 96.2 0.003 1E-07 47.9 3.5 35 38-72 38-75 (91)
121 1wim_A KIAA0161 protein; ring 96.2 0.0034 1.2E-07 47.8 3.5 35 40-74 5-42 (94)
122 1iym_A EL5; ring-H2 finger, ub 96.1 0.0027 9.3E-08 43.0 2.5 34 39-72 4-41 (55)
123 2y1n_A E3 ubiquitin-protein li 96.0 0.0029 1E-07 60.8 3.0 34 39-72 331-364 (389)
124 3m62_A Ubiquitin conjugation f 95.9 0.0046 1.6E-07 65.4 4.0 36 37-72 888-924 (968)
125 2ecg_A Baculoviral IAP repeat- 95.8 0.0038 1.3E-07 45.6 2.1 28 40-67 25-53 (75)
126 3k1l_B Fancl; UBC, ring, RWD, 95.7 0.0014 4.6E-08 62.1 -0.8 52 209-260 306-372 (381)
127 2ecl_A Ring-box protein 2; RNF 95.4 0.0065 2.2E-07 45.1 2.2 35 40-74 15-64 (81)
128 1joc_A EEA1, early endosomal a 95.3 0.065 2.2E-06 43.3 8.0 33 212-244 70-102 (125)
129 4ic3_A E3 ubiquitin-protein li 95.2 0.0072 2.5E-07 44.0 1.8 30 40-69 24-54 (74)
130 3dpl_R Ring-box protein 1; ubi 95.0 0.015 5.2E-07 45.7 3.4 34 40-73 37-88 (106)
131 2ea5_A Cell growth regulator w 95.0 0.021 7E-07 41.1 3.7 30 39-68 14-44 (68)
132 1e4u_A Transcriptional repress 94.7 0.018 6.2E-07 42.7 2.9 34 38-71 9-46 (78)
133 3m62_A Ubiquitin conjugation f 94.1 0.028 9.6E-07 59.5 3.8 55 209-267 889-944 (968)
134 1m3v_A FLIN4, fusion of the LI 93.8 0.044 1.5E-06 43.6 3.6 81 176-268 6-88 (122)
135 3i2d_A E3 SUMO-protein ligase 93.6 0.052 1.8E-06 51.7 4.3 52 211-265 249-304 (371)
136 3nw0_A Non-structural maintena 93.5 0.069 2.4E-06 47.8 4.6 49 210-261 179-229 (238)
137 2yho_A E3 ubiquitin-protein li 93.1 0.036 1.2E-06 41.0 1.9 30 40-69 18-48 (79)
138 4a0k_B E3 ubiquitin-protein li 93.0 0.018 6.1E-07 46.2 0.0 34 41-74 49-100 (117)
139 2vje_B MDM4 protein; proto-onc 93.0 0.049 1.7E-06 38.4 2.3 33 39-71 6-41 (63)
140 2d8s_A Cellular modulator of i 92.9 0.15 5E-06 37.9 5.0 36 39-74 14-56 (80)
141 4fo9_A E3 SUMO-protein ligase 92.9 0.08 2.7E-06 50.2 4.3 52 211-265 215-270 (360)
142 2vje_A E3 ubiquitin-protein li 92.8 0.05 1.7E-06 38.4 2.1 32 40-71 8-42 (64)
143 2ko5_A Ring finger protein Z; 92.0 0.096 3.3E-06 40.3 2.9 65 208-277 25-89 (99)
144 3t6p_A Baculoviral IAP repeat- 91.3 0.065 2.2E-06 50.6 1.6 30 40-69 295-325 (345)
145 1weo_A Cellulose synthase, cat 88.6 0.51 1.7E-05 35.9 4.3 52 210-261 15-70 (93)
146 2xjy_A Rhombotin-2; oncoprotei 85.8 0.61 2.1E-05 36.9 3.6 52 210-263 28-80 (131)
147 2jun_A Midline-1; B-BOX, TRIM, 85.5 0.55 1.9E-05 35.6 3.1 33 211-245 3-36 (101)
148 2rgt_A Fusion of LIM/homeobox 84.8 1.9 6.7E-05 35.7 6.5 37 211-248 93-129 (169)
149 2jtn_A LIM domain-binding prot 83.9 1.5 5.3E-05 36.8 5.5 35 210-245 146-180 (182)
150 2xqn_T Testin, TESS; metal-bin 81.8 4 0.00014 31.8 6.9 73 176-263 4-77 (126)
151 1y02_A CARP2, FYVE-ring finger 81.2 0.093 3.2E-06 42.2 -3.1 45 211-255 19-63 (120)
152 1wfk_A Zinc finger, FYVE domai 81.1 0.67 2.3E-05 35.0 1.9 36 209-244 7-42 (88)
153 1z2q_A LM5-1; membrane protein 80.4 0.83 2.8E-05 34.0 2.2 34 211-244 21-54 (84)
154 3mjh_B Early endosome antigen 79.6 0.47 1.6E-05 29.7 0.5 15 211-225 5-19 (34)
155 1vfy_A Phosphatidylinositol-3- 76.6 0.81 2.8E-05 33.1 1.1 31 213-243 13-43 (73)
156 2yw8_A RUN and FYVE domain-con 76.5 0.95 3.2E-05 33.5 1.5 34 211-244 19-52 (82)
157 1rut_X Flinc4, fusion protein 76.3 1.1 3.7E-05 38.0 2.0 76 176-263 6-83 (188)
158 3t7l_A Zinc finger FYVE domain 75.7 0.86 2.9E-05 34.4 1.1 33 212-244 21-53 (90)
159 2cup_A Skeletal muscle LIM-pro 75.2 1.9 6.4E-05 32.3 2.9 74 175-263 5-80 (101)
160 3mpx_A FYVE, rhogef and PH dom 73.6 0.68 2.3E-05 44.0 0.0 49 211-259 375-430 (434)
161 2rgt_A Fusion of LIM/homeobox 73.1 3.4 0.00012 34.2 4.3 74 176-265 7-81 (169)
162 1dvp_A HRS, hepatocyte growth 72.8 0.89 3.1E-05 39.7 0.6 33 212-244 162-194 (220)
163 1x4u_A Zinc finger, FYVE domai 72.2 1.4 4.6E-05 32.8 1.4 34 211-244 14-47 (84)
164 2cs3_A Protein C14ORF4, MY039 69.9 6 0.00021 29.5 4.4 39 209-248 13-52 (93)
165 2jtn_A LIM domain-binding prot 69.0 7.9 0.00027 32.3 5.7 76 173-264 58-134 (182)
166 3zyq_A Hepatocyte growth facto 68.6 1.4 4.6E-05 38.9 0.8 32 213-244 166-197 (226)
167 2ctu_A Zinc finger protein 483 66.6 1.1 3.7E-05 30.5 -0.2 37 209-262 16-52 (73)
168 2xjy_A Rhombotin-2; oncoprotei 66.5 6 0.00021 30.9 4.2 35 211-247 94-128 (131)
169 2eps_A POZ-, at HOOK-, and zin 66.5 10 0.00035 24.3 4.7 39 208-261 9-53 (54)
170 1b8t_A Protein (CRP1); LIM dom 61.5 7.8 0.00027 32.6 4.3 60 175-247 7-67 (192)
171 1dx8_A Rubredoxin; electron tr 60.1 3.2 0.00011 30.0 1.3 59 210-276 6-65 (70)
172 4gzn_C ZFP-57, zinc finger pro 59.8 4.7 0.00016 27.6 2.1 41 210-261 3-44 (60)
173 1x5w_A Zinc finger protein 64, 59.6 5.7 0.0002 26.8 2.6 40 208-262 6-50 (70)
174 3uk3_C Zinc finger protein 217 59.2 2.8 9.4E-05 27.0 0.8 41 210-261 3-44 (57)
175 2jun_A Midline-1; B-BOX, TRIM, 57.7 5 0.00017 30.0 2.1 28 42-69 5-35 (101)
176 2jyp_A Aragonite protein AP7; 57.5 4.7 0.00016 24.5 1.5 15 34-48 2-17 (36)
177 2gqj_A Zinc finger protein KIA 57.1 4.6 0.00016 29.7 1.8 45 209-262 22-67 (98)
178 1vd4_A Transcription initiatio 56.3 1.2 4E-05 30.2 -1.6 39 209-262 12-52 (62)
179 2epr_A POZ-, at HOOK-, and zin 55.1 16 0.00053 22.6 4.0 17 208-224 9-25 (48)
180 1x6e_A Zinc finger protein 24; 54.5 7.2 0.00025 26.5 2.4 42 209-261 12-54 (72)
181 1h0z_A Serine protease inhibit 54.5 2.1 7.2E-05 30.9 -0.5 24 50-73 29-52 (68)
182 2lce_A B-cell lymphoma 6 prote 54.2 4.6 0.00016 27.7 1.3 42 209-261 15-57 (74)
183 2ee8_A Protein ODD-skipped-rel 53.1 14 0.00049 26.7 4.0 64 176-262 18-86 (106)
184 2ct0_A Non-SMC element 1 homol 51.5 8.6 0.00029 27.8 2.4 36 39-74 14-50 (74)
185 1x61_A Thyroid receptor intera 50.4 19 0.00065 24.8 4.1 34 211-247 33-66 (72)
186 1z60_A TFIIH basal transcripti 49.6 12 0.00041 26.1 2.8 43 212-256 16-59 (59)
187 2ctd_A Zinc finger protein 512 49.2 7.9 0.00027 28.6 2.0 43 209-262 32-75 (96)
188 2pv0_B DNA (cytosine-5)-methyl 49.2 15 0.00051 35.0 4.3 44 211-258 93-148 (386)
189 1x6a_A LIMK-2, LIM domain kina 47.9 32 0.0011 24.2 5.1 37 210-247 40-76 (81)
190 2d8v_A Zinc finger FYVE domain 47.7 13 0.00045 26.5 2.8 31 38-70 6-38 (67)
191 1x64_A Alpha-actinin-2 associa 47.2 64 0.0022 23.1 6.8 63 171-247 21-84 (89)
192 2fiy_A Protein FDHE homolog; F 47.0 2.1 7E-05 39.7 -2.0 24 235-258 208-231 (309)
193 1vyx_A ORF K3, K3RING; zinc-bi 46.9 11 0.00039 25.8 2.3 35 40-74 6-45 (60)
194 2yt9_A Zinc finger-containing 46.3 14 0.00048 26.1 2.9 53 209-261 5-77 (95)
195 1iml_A CRIP, cysteine rich int 45.4 15 0.00052 25.7 2.9 44 211-259 27-71 (76)
196 3pwf_A Rubrerythrin; non heme 45.2 8.7 0.0003 32.2 1.8 12 210-221 137-148 (170)
197 1yuz_A Nigerythrin; rubrythrin 44.8 7.6 0.00026 33.5 1.4 13 210-222 170-182 (202)
198 2dlq_A GLI-kruppel family memb 44.8 12 0.0004 27.9 2.4 16 209-224 5-20 (124)
199 3a1b_A DNA (cytosine-5)-methyl 42.5 26 0.00089 29.2 4.3 43 211-257 79-133 (159)
200 3pis_D Kazal-type serine prote 41.7 14 0.00047 23.9 2.0 20 51-70 7-26 (42)
201 2gmg_A Hypothetical protein PF 41.3 8.7 0.0003 29.9 1.1 30 230-264 70-99 (105)
202 3vk6_A E3 ubiquitin-protein li 41.2 16 0.00056 28.2 2.6 31 41-71 2-33 (101)
203 2dar_A PDZ and LIM domain prot 40.4 37 0.0013 24.5 4.5 60 174-247 24-84 (90)
204 1j2o_A FLIN2, fusion of rhombo 40.3 37 0.0013 25.8 4.7 62 176-249 4-67 (114)
205 2els_A Zinc finger protein 406 40.0 14 0.00048 21.0 1.7 16 209-224 7-22 (36)
206 2jne_A Hypothetical protein YF 39.7 1.8 6.1E-05 33.4 -3.0 60 212-285 33-94 (101)
207 2cs3_A Protein C14ORF4, MY039 39.4 30 0.001 25.7 3.7 36 40-75 15-54 (93)
208 2k5c_A Uncharacterized protein 39.1 1.5 5.1E-05 32.8 -3.4 49 176-224 9-64 (95)
209 2kpi_A Uncharacterized protein 38.6 11 0.00038 25.8 1.2 13 210-222 9-21 (56)
210 2lt7_A Transcriptional regulat 38.0 20 0.00067 28.2 2.8 53 210-262 21-91 (133)
211 1wjp_A Zinc finger protein 295 37.6 29 0.001 25.2 3.6 16 209-224 14-29 (107)
212 4ayb_P DNA-directed RNA polyme 37.5 2.1 7.3E-05 28.6 -2.5 12 248-259 22-33 (48)
213 2elr_A Zinc finger protein 406 37.4 17 0.00059 20.4 1.8 16 209-224 7-22 (36)
214 1pft_A TFIIB, PFTFIIBN; N-term 36.9 20 0.00069 23.4 2.3 9 211-219 5-13 (50)
215 2l3k_A Rhombotin-2, linker, LI 36.6 28 0.00097 26.9 3.5 52 210-265 35-86 (123)
216 2cur_A Skeletal muscle LIM-pro 36.1 60 0.002 21.9 4.8 34 211-247 31-64 (69)
217 1x62_A C-terminal LIM domain p 36.1 41 0.0014 23.6 4.1 60 174-247 14-74 (79)
218 2elq_A Zinc finger protein 406 35.9 19 0.00066 20.3 1.9 16 209-224 7-22 (36)
219 2xzm_6 RPS27E; ribosome, trans 35.9 17 0.00059 26.9 1.9 28 212-239 33-63 (81)
220 1b8t_A Protein (CRP1); LIM dom 35.8 32 0.0011 28.7 3.9 70 175-259 115-185 (192)
221 2kvh_A Zinc finger and BTB dom 35.8 15 0.00051 19.3 1.3 14 211-224 3-16 (27)
222 2kvf_A Zinc finger and BTB dom 35.8 15 0.00052 19.3 1.3 14 211-224 3-16 (28)
223 1llm_C Chimera of ZIF23-GCN4; 35.7 12 0.00042 26.3 1.1 40 211-261 3-43 (88)
224 2elt_A Zinc finger protein 406 35.7 19 0.00066 20.2 1.8 16 209-224 7-22 (36)
225 1lko_A Rubrerythrin all-iron(I 35.6 10 0.00035 32.3 0.7 12 211-222 155-166 (191)
226 3iay_A DNA polymerase delta ca 35.4 55 0.0019 34.5 6.5 33 52-84 577-617 (919)
227 2kvg_A Zinc finger and BTB dom 34.3 15 0.00053 19.4 1.2 14 211-224 3-16 (27)
228 2lri_C Autoimmune regulator; Z 34.0 38 0.0013 23.7 3.5 46 210-259 11-60 (66)
229 3i2d_A E3 SUMO-protein ligase 33.9 33 0.0011 32.4 4.0 32 40-71 249-283 (371)
230 2lbm_A Transcriptional regulat 33.6 55 0.0019 26.6 4.9 44 210-257 62-116 (142)
231 2dar_A PDZ and LIM domain prot 32.8 48 0.0017 23.9 4.1 45 210-266 24-68 (90)
232 1wig_A KIAA1808 protein; LIM d 32.8 16 0.00056 25.5 1.4 27 42-68 33-61 (73)
233 2elx_A Zinc finger protein 406 32.8 22 0.00074 19.7 1.7 16 209-224 5-20 (35)
234 2k16_A Transcription initiatio 32.6 13 0.00045 26.4 0.8 51 209-260 16-70 (75)
235 1a1h_A QGSR zinc finger peptid 32.6 16 0.00054 25.5 1.3 42 210-261 33-74 (90)
236 2vpb_A Hpygo1, pygopus homolog 32.3 31 0.0011 24.1 2.7 35 209-243 6-41 (65)
237 1p7a_A BF3, BKLF, kruppel-like 32.0 19 0.00066 20.4 1.4 16 209-224 9-24 (37)
238 2m0d_A Zinc finger and BTB dom 32.0 18 0.00063 19.0 1.2 14 211-224 3-16 (30)
239 2lvu_A Zinc finger and BTB dom 38.1 9.7 0.00033 19.9 0.0 14 212-225 3-16 (26)
240 3f6q_B LIM and senescent cell 31.9 24 0.00081 24.0 2.1 59 175-246 11-71 (72)
241 1ard_A Yeast transcription fac 31.9 15 0.00052 19.3 0.9 13 212-224 3-15 (29)
242 1wil_A KIAA1045 protein; ring 31.7 41 0.0014 25.2 3.3 45 211-257 15-75 (89)
243 2m0f_A Zinc finger and BTB dom 31.7 17 0.00059 19.0 1.1 14 211-224 2-15 (29)
244 2dlk_A Novel protein; ZF-C2H2 31.6 35 0.0012 23.0 3.0 41 210-260 37-79 (79)
245 1a7i_A QCRP2 (LIM1); LIM domai 31.3 18 0.00062 25.6 1.4 68 175-257 7-75 (81)
246 2elp_A Zinc finger protein 406 30.9 28 0.00095 19.7 2.0 16 209-224 7-22 (37)
247 2kkx_A Uncharacterized protein 30.8 58 0.002 25.1 4.2 55 209-266 25-84 (102)
248 1znf_A 31ST zinc finger from X 30.8 17 0.00058 18.8 0.9 13 212-224 2-14 (27)
249 1rik_A E6APC1 peptide; E6-bind 30.7 18 0.00062 19.0 1.1 14 211-224 2-15 (29)
250 2wbt_A B-129; zinc finger; 2.7 30.5 16 0.00054 27.7 1.0 37 210-261 73-112 (129)
251 2elv_A Zinc finger protein 406 30.1 27 0.00092 19.6 1.8 16 209-224 7-22 (36)
252 2m0e_A Zinc finger and BTB dom 29.5 18 0.00063 18.8 0.9 13 212-224 3-15 (29)
253 1nyp_A Pinch protein; LIM doma 29.3 26 0.00089 23.6 1.9 33 211-246 31-63 (66)
254 2d8x_A Protein pinch; LIM doma 29.3 71 0.0024 21.6 4.3 34 211-247 31-64 (70)
255 1klr_A Zinc finger Y-chromosom 29.1 19 0.00067 18.8 1.0 13 212-224 3-15 (30)
256 2elo_A Zinc finger protein 406 29.1 25 0.00086 19.9 1.6 16 209-224 7-22 (37)
257 3j21_d 50S ribosomal protein L 28.7 29 0.001 26.1 2.2 17 230-247 65-81 (89)
258 1srk_A Zinc finger protein ZFP 28.5 27 0.00091 19.4 1.6 16 209-224 5-20 (35)
259 3qex_A DNA polymerase, GP43; d 28.5 2E+02 0.0069 30.2 9.3 37 52-88 453-495 (903)
260 2dj7_A Actin-binding LIM prote 28.5 68 0.0023 22.7 4.2 62 172-247 12-74 (80)
261 2lvt_A Zinc finger and BTB dom 34.3 12 0.00042 19.9 0.0 14 212-225 3-16 (29)
262 4dgw_B PRE-mRNA-splicing facto 28.2 86 0.003 25.8 5.2 31 63-101 71-101 (152)
263 1wyh_A SLIM 2, skeletal muscle 28.0 38 0.0013 23.1 2.6 33 211-246 33-65 (72)
264 2d8z_A Four and A half LIM dom 27.9 59 0.002 22.0 3.6 33 211-246 31-63 (70)
265 1x64_A Alpha-actinin-2 associa 27.9 55 0.0019 23.5 3.6 45 210-266 24-68 (89)
266 2ept_A Zinc finger protein 32; 27.6 31 0.0011 20.1 1.9 16 209-224 8-23 (41)
267 3ql9_A Transcriptional regulat 27.5 75 0.0026 25.4 4.6 43 211-257 57-110 (129)
268 2lvr_A Zinc finger and BTB dom 33.5 13 0.00044 19.8 0.0 14 211-224 3-16 (30)
269 2pk7_A Uncharacterized protein 27.1 29 0.001 24.7 1.9 11 211-221 8-18 (69)
270 2iyb_E Testin, TESS, TES; LIM 27.0 21 0.00072 24.2 1.1 33 210-245 31-64 (65)
271 1x4l_A Skeletal muscle LIM-pro 27.0 24 0.00082 24.3 1.4 33 211-246 35-67 (72)
272 2l4z_A DNA endonuclease RBBP8, 26.7 24 0.00084 27.5 1.5 28 42-69 90-120 (123)
273 3gox_A Restriction endonucleas 26.5 51 0.0018 28.3 3.6 76 184-260 47-148 (200)
274 2l43_A N-teminal domain from h 26.4 13 0.00043 27.8 -0.2 55 209-263 23-80 (88)
275 2ytb_A Zinc finger protein 32; 26.1 28 0.00096 20.3 1.4 16 209-224 9-24 (42)
276 3s1b_A Mini-Z; VEGF, cystine k 25.5 25 0.00084 21.0 1.0 9 62-70 1-9 (34)
277 1x4k_A Skeletal muscle LIM-pro 25.5 40 0.0014 22.9 2.4 58 176-246 6-65 (72)
278 2yte_A Zinc finger protein 473 25.5 30 0.001 20.2 1.5 16 209-224 8-23 (42)
279 1paa_A Yeast transcription fac 25.4 24 0.00082 18.6 1.0 13 212-224 3-15 (30)
280 2egq_A FHL1 protein; LIM domai 25.4 27 0.00091 24.3 1.4 31 211-244 46-76 (77)
281 2q2f_A Selenoprotein S; anti-p 25.3 1.7E+02 0.0058 21.8 5.7 31 83-113 58-88 (89)
282 1v6g_A Actin binding LIM prote 25.2 38 0.0013 23.8 2.2 12 212-223 42-53 (81)
283 1x68_A FHL5 protein; four-and- 25.2 26 0.0009 24.4 1.3 26 42-67 37-63 (76)
284 1njq_A Superman protein; zinc- 25.1 30 0.001 20.0 1.4 16 209-224 4-19 (39)
285 2yu5_A Zinc finger protein 473 25.0 33 0.0011 20.3 1.6 17 209-225 10-26 (44)
286 3k1l_B Fancl; UBC, ring, RWD, 24.2 41 0.0014 31.8 2.7 35 40-74 308-350 (381)
287 2jvx_A NF-kappa-B essential mo 24.2 30 0.001 20.4 1.2 14 211-224 3-16 (28)
288 2eof_A Zinc finger protein 268 24.2 33 0.0011 20.2 1.5 16 209-224 10-25 (44)
289 1x63_A Skeletal muscle LIM-pro 24.2 49 0.0017 23.2 2.7 59 176-247 16-76 (82)
290 1rim_A E6APC2 peptide; E6-bind 24.0 25 0.00084 19.7 0.8 13 212-224 3-15 (33)
291 2epv_A Zinc finger protein 268 23.9 34 0.0012 20.4 1.6 16 209-224 10-25 (44)
292 2enf_A Zinc finger protein 347 23.9 35 0.0012 20.5 1.6 16 209-224 10-25 (46)
293 2epc_A Zinc finger protein 32; 23.4 34 0.0012 19.9 1.5 16 209-224 9-24 (42)
294 2enh_A Zinc finger protein 28 23.4 38 0.0013 20.3 1.7 16 209-224 10-25 (46)
295 1g47_A Pinch protein; LIM doma 23.4 26 0.00088 24.3 1.0 27 42-68 41-68 (77)
296 2el5_A Zinc finger protein 268 23.4 34 0.0012 20.0 1.5 16 209-224 8-23 (42)
297 2eoj_A Zinc finger protein 268 23.2 32 0.0011 20.3 1.3 16 209-224 10-25 (44)
298 2jrp_A Putative cytoplasmic pr 23.2 49 0.0017 24.4 2.5 19 249-267 51-69 (81)
299 2d8y_A Eplin protein; LIM doma 23.1 1.3E+02 0.0043 21.5 4.9 61 174-247 14-75 (91)
300 2eox_A Zinc finger protein 473 23.0 36 0.0012 20.1 1.5 17 209-225 10-26 (44)
301 2emg_A Zinc finger protein 484 23.0 35 0.0012 20.4 1.5 16 209-224 10-25 (46)
302 2kn9_A Rubredoxin; metalloprot 22.9 40 0.0014 24.9 2.0 51 210-268 26-77 (81)
303 2eoy_A Zinc finger protein 473 22.9 38 0.0013 20.3 1.6 17 209-225 10-26 (46)
304 1cgj_I Pancreatic secretory tr 22.7 60 0.002 21.8 2.7 20 50-69 19-38 (56)
305 2lv2_A Insulinoma-associated p 22.6 35 0.0012 24.8 1.6 12 212-223 29-40 (85)
306 2lcq_A Putative toxin VAPC6; P 22.6 23 0.00077 29.0 0.6 13 211-223 132-144 (165)
307 2eos_A B-cell lymphoma 6 prote 22.6 35 0.0012 19.9 1.4 16 209-224 9-24 (42)
308 2eon_A ZFP-95, zinc finger pro 22.5 39 0.0013 20.3 1.7 16 209-224 10-25 (46)
309 2hf1_A Tetraacyldisaccharide-1 22.5 31 0.001 24.6 1.2 16 251-266 28-43 (68)
310 2eow_A Zinc finger protein 347 22.4 37 0.0013 20.2 1.5 16 209-224 10-25 (46)
311 2jr6_A UPF0434 protein NMA0874 22.4 35 0.0012 24.3 1.5 38 210-267 7-44 (68)
312 2emi_A Zinc finger protein 484 22.3 37 0.0012 20.4 1.5 16 209-224 10-25 (46)
313 2yts_A Zinc finger protein 484 22.3 38 0.0013 20.2 1.5 16 209-224 10-25 (46)
314 2ytf_A Zinc finger protein 268 22.2 39 0.0013 20.2 1.6 16 209-224 10-25 (46)
315 2en7_A Zinc finger protein 268 22.2 32 0.0011 20.3 1.2 16 209-224 10-25 (44)
316 2em3_A Zinc finger protein 28 22.1 40 0.0014 20.2 1.6 16 209-224 10-25 (46)
317 2en3_A ZFP-95, zinc finger pro 22.1 41 0.0014 20.1 1.7 17 209-225 10-26 (46)
318 1qxf_A GR2, 30S ribosomal prot 22.1 40 0.0014 24.0 1.7 28 212-239 8-38 (66)
319 3iuf_A Zinc finger protein UBI 22.0 38 0.0013 21.0 1.5 16 209-224 5-20 (48)
320 2eq3_A Zinc finger protein 347 22.0 36 0.0012 20.3 1.4 16 209-224 10-25 (46)
321 2elm_A Zinc finger protein 406 22.0 33 0.0011 19.6 1.1 16 209-224 7-22 (37)
322 2emb_A Zinc finger protein 473 21.9 41 0.0014 19.9 1.6 16 209-224 10-25 (44)
323 2cuq_A Four and A half LIM dom 21.9 1.5E+02 0.0052 20.3 5.0 34 211-247 41-74 (80)
324 1ovx_A ATP-dependent CLP prote 21.9 68 0.0023 22.8 2.9 33 211-245 18-50 (67)
325 2emj_A Zinc finger protein 28 21.7 40 0.0014 20.2 1.6 16 209-224 10-25 (46)
326 2cor_A Pinch protein; LIM doma 21.7 69 0.0024 22.5 3.1 58 175-246 15-72 (79)
327 2eov_A Zinc finger protein 484 21.7 39 0.0013 20.1 1.5 16 209-224 10-25 (46)
328 2em5_A ZFP-95, zinc finger pro 21.6 42 0.0014 20.1 1.7 16 209-224 10-25 (46)
329 2yrj_A Zinc finger protein 473 21.6 41 0.0014 20.1 1.6 16 209-224 10-25 (46)
330 2eml_A Zinc finger protein 28 21.3 39 0.0013 20.2 1.5 16 209-224 10-25 (46)
331 2en2_A B-cell lymphoma 6 prote 21.3 39 0.0013 19.7 1.4 16 209-224 9-24 (42)
332 2epw_A Zinc finger protein 268 21.2 44 0.0015 19.9 1.7 17 209-225 10-26 (46)
333 2yti_A Zinc finger protein 347 21.2 36 0.0012 20.4 1.3 16 209-224 10-25 (46)
334 2en9_A Zinc finger protein 28 21.2 42 0.0014 20.1 1.6 16 209-224 10-25 (46)
335 3qtl_D Kazal-type serine prote 21.1 46 0.0016 23.9 2.0 20 51-70 7-26 (75)
336 4rxn_A Rubredoxin; electron tr 21.1 30 0.001 23.6 0.8 49 211-267 3-52 (54)
337 2ds5_A CLPX, ATP-dependent CLP 21.1 93 0.0032 20.8 3.3 33 211-245 11-43 (51)
338 2yth_A Zinc finger protein 224 21.0 40 0.0014 20.2 1.5 16 209-224 10-25 (46)
339 2ep3_A Zinc finger protein 484 21.0 41 0.0014 20.1 1.5 16 209-224 10-25 (46)
340 1fv5_A First zinc finger of U- 21.0 38 0.0013 20.5 1.3 17 209-225 6-22 (36)
341 2ely_A Zinc finger protein 224 21.0 45 0.0015 20.0 1.7 17 209-225 10-26 (46)
342 3d00_A Tungsten formylmethanof 20.9 65 0.0022 27.3 3.2 26 209-243 161-186 (191)
343 2em6_A Zinc finger protein 224 20.9 43 0.0015 20.0 1.6 16 209-224 10-25 (46)
344 2epu_A Zinc finger protein 32; 20.9 46 0.0016 19.8 1.7 16 209-224 10-25 (45)
345 2ene_A Zinc finger protein 347 20.8 44 0.0015 20.0 1.6 16 209-224 10-25 (46)
346 2ytg_A ZFP-95, zinc finger pro 20.8 42 0.0014 20.0 1.5 17 209-225 10-26 (46)
347 2ytp_A Zinc finger protein 484 20.8 43 0.0015 20.1 1.6 16 209-224 10-25 (46)
348 2em7_A Zinc finger protein 224 20.7 43 0.0015 20.0 1.6 16 209-224 10-25 (46)
349 2eme_A Zinc finger protein 473 20.6 44 0.0015 19.9 1.6 16 209-224 10-25 (46)
350 1j2o_A FLIN2, fusion of rhombo 20.6 55 0.0019 24.8 2.5 29 42-70 32-63 (114)
351 2jny_A Uncharacterized BCR; st 20.6 39 0.0013 24.0 1.4 13 210-222 9-21 (67)
352 3j20_W 30S ribosomal protein S 20.5 46 0.0016 23.4 1.8 28 212-239 16-46 (63)
353 2eq1_A Zinc finger protein 347 20.5 40 0.0014 20.2 1.4 16 209-224 10-25 (46)
354 2yu8_A Zinc finger protein 347 20.5 46 0.0016 19.9 1.6 17 209-225 10-26 (46)
355 2eq2_A Zinc finger protein 347 20.5 37 0.0013 20.3 1.2 16 209-224 10-25 (46)
356 2cr8_A MDM4 protein; ZF-ranbp 20.4 34 0.0012 23.1 1.0 17 207-224 7-23 (53)
357 2em4_A Zinc finger protein 28 20.4 42 0.0014 20.1 1.5 16 209-224 10-25 (46)
358 2epz_A Zinc finger protein 28 20.3 47 0.0016 19.8 1.7 16 209-224 10-25 (46)
359 2eop_A Zinc finger protein 268 20.3 44 0.0015 19.9 1.5 16 209-224 10-25 (46)
360 2yto_A Zinc finger protein 484 20.3 44 0.0015 20.0 1.5 16 209-224 10-25 (46)
361 2ep2_A Zinc finger protein 484 20.3 44 0.0015 20.0 1.5 16 209-224 10-25 (46)
362 2eoo_A ZFP-95, zinc finger pro 20.2 44 0.0015 20.0 1.5 17 209-225 10-26 (46)
363 2emh_A Zinc finger protein 484 20.2 43 0.0015 20.0 1.4 17 209-225 10-26 (46)
364 2eoh_A Zinc finger protein 28 20.1 43 0.0015 20.1 1.4 16 209-224 10-25 (46)
365 2l5u_A Chromodomain-helicase-D 20.1 57 0.002 22.2 2.2 45 209-257 9-57 (61)
366 1x3h_A Leupaxin; paxillin fami 20.1 1.5E+02 0.0051 20.3 4.6 58 176-246 16-73 (80)
367 2em8_A Zinc finger protein 224 20.0 48 0.0016 19.8 1.7 16 209-224 10-25 (46)
368 2el4_A Zinc finger protein 268 20.0 46 0.0016 19.8 1.6 16 209-224 10-25 (46)
No 1
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=99.69 E-value=1.4e-17 Score=135.81 Aligned_cols=81 Identities=25% Similarity=0.632 Sum_probs=68.5
Q ss_pred ccCCCCCCcCCCCCceeeecccCCCcccccCCCCCceeccCccccccCC---cceEEEccCCccchHHHHHHHhhcCCCC
Q 022029 176 TICPEGKEKLKLKSLFPVYFTEDKSEEKKSSSNDKSFICPSCKVTLTNT---LSLVALSSCGHVFCKKCADKFMAVDKVC 252 (304)
Q Consensus 176 ~~CP~sg~~l~lKDLi~l~f~~~~~~~~~~~~~~~~~~CPIc~k~~~~~---~~~v~l~~CGhVfc~~Ci~~~~k~~~~C 252 (304)
..||+-..++..+++.++.+.. ....|+||++.|.+. .+.+++.+|||+||..||.+|+.....|
T Consensus 49 ~~CP~Cr~~~~~~~l~~l~i~~------------~~~~C~iC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~C 116 (133)
T 4ap4_A 49 NTCPTCRKKINHKRYHPIYIGS------------GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTC 116 (133)
T ss_dssp SBCTTTCCBCTTTCEEECBCSS------------SSCBCTTTCCBHHHHHHTTCCEEEETTSBEEEHHHHHHHHHHCSBC
T ss_pred CCCCCCCCcCccccccccccCC------------CCCCCCCCCCccccccccCcceEeCCCCChhhHHHHHHHHHcCCCC
Confidence 4799999999999998876532 346899999999764 2344678999999999999999888999
Q ss_pred CCCCCCCCCCCceEec
Q 022029 253 LVCNKPCKERNLVNVE 268 (304)
Q Consensus 253 PvC~~~f~~~diI~L~ 268 (304)
|+|+.++..+++++|.
T Consensus 117 P~Cr~~~~~~~~~~~~ 132 (133)
T 4ap4_A 117 PTCRKKINHKRYHPIY 132 (133)
T ss_dssp TTTCCBCCGGGEEEEC
T ss_pred CCCCCcCChhcceeee
Confidence 9999999999998874
No 2
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.27 E-value=4.4e-12 Score=93.51 Aligned_cols=61 Identities=23% Similarity=0.533 Sum_probs=53.2
Q ss_pred CCCceeccCccccccCCcceEEEccCCccchHHHHHHHhhcCCCCCCCCCCCCCCCceEecCCC
Q 022029 208 NDKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKERNLVNVEKGG 271 (304)
Q Consensus 208 ~~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~~~~CPvC~~~f~~~diI~L~~~g 271 (304)
.+..+.||||++.|.++ +.+.+|||+||..||.+|+.....||+|+.++...|++...++|
T Consensus 12 ~~~~~~C~IC~~~~~~p---~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~~~~~G 72 (72)
T 2djb_A 12 LTPYILCSICKGYLIDA---TTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPLSGPSSG 72 (72)
T ss_dssp CCGGGSCTTTSSCCSSC---EECSSSCCEECHHHHHHHHHHCSSCTTTCCCCCSSCSCCCCSCC
T ss_pred cCCCCCCCCCChHHHCc---CEECCCCCHHHHHHHHHHHHcCCcCCCcCcccCcccccccCCCC
Confidence 35678999999999987 45669999999999999998888999999999999988876654
No 3
>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A
Probab=99.24 E-value=5.7e-12 Score=90.89 Aligned_cols=33 Identities=15% Similarity=0.193 Sum_probs=30.7
Q ss_pred cceecccCCCCCceec-CCCceeehhhHHHHHHH
Q 022029 41 DACCLCLKPFIDPLCC-QKGHIYCKECILECLLS 73 (304)
Q Consensus 41 ~~C~LcL~p~~dPV~t-~~G~lyckEcIle~ll~ 73 (304)
..|.||+.+.+|||++ ++||+|||+||.+||..
T Consensus 4 ~~CpIs~~~m~dPV~~~~sG~~yer~~I~~~l~~ 37 (61)
T 2bay_A 4 MLCAISGKVPRRPVLSPKSRTIFEKSLLEQYVKD 37 (61)
T ss_dssp CCCTTTCSCCSSEEEETTTTEEEEHHHHHHHHHH
T ss_pred EEecCCCCCCCCCEEeCCCCcEEcHHHHHHHHHh
Confidence 4799999999999999 89999999999999963
No 4
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=99.19 E-value=1.4e-11 Score=88.88 Aligned_cols=58 Identities=26% Similarity=0.596 Sum_probs=50.3
Q ss_pred ceeccCccc-cccCCcceEEEccCCccchHHHHHHHhh-cCCCCCCCCCCCCCCCceEec
Q 022029 211 SFICPSCKV-TLTNTLSLVALSSCGHVFCKKCADKFMA-VDKVCLVCNKPCKERNLVNVE 268 (304)
Q Consensus 211 ~~~CPIc~k-~~~~~~~~v~l~~CGhVfc~~Ci~~~~k-~~~~CPvC~~~f~~~diI~L~ 268 (304)
.+.||||++ .|.++...+++.+|||+||..||.+++. ....||+|+.++...+++...
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~~ 62 (65)
T 1g25_A 3 DQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKSNFRVQL 62 (65)
T ss_dssp TTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTTSSSCTTTCCCCSSCCCEEEC
T ss_pred CCcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHHcCCCcCCCCCCccccccceeec
Confidence 578999999 8999876667789999999999999965 456899999999999988753
No 5
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.19 E-value=1.2e-11 Score=92.20 Aligned_cols=65 Identities=26% Similarity=0.519 Sum_probs=56.4
Q ss_pred CCceeccCccccccCCcceEEEccCCccchHHHHHHHhhcCCCCCCCCCCCCCCCceEecCCCccc
Q 022029 209 DKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKERNLVNVEKGGTGF 274 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~~~~CPvC~~~f~~~diI~L~~~gtgf 274 (304)
...+.|+||++.|.+...+ ++.+|||+||..||.+|+.....||+|+.++...+++...++++|.
T Consensus 13 ~~~~~C~IC~~~~~~~~~~-~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~~~~~~~~~ 77 (78)
T 2ect_A 13 GSGLECPVCKEDYALGESV-RQLPCNHLFHDSCIVPWLEQHDSCPVCRKSLTGQNTATNPPGLTGV 77 (78)
T ss_dssp SSSCCCTTTTSCCCTTSCE-EECTTSCEEETTTTHHHHTTTCSCTTTCCCCCCSCSCCCCSSCTTC
T ss_pred CCCCCCeeCCccccCCCCE-EEeCCCCeecHHHHHHHHHcCCcCcCcCCccCCcccCCCCCCCCCC
Confidence 4578999999999887544 4558999999999999998888999999999999999888887764
No 6
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=99.16 E-value=1.4e-11 Score=89.96 Aligned_cols=60 Identities=23% Similarity=0.594 Sum_probs=52.0
Q ss_pred CCceeccCccccccCC---cceEEEccCCccchHHHHHHHhhcCCCCCCCCCCCCCCCceEec
Q 022029 209 DKSFICPSCKVTLTNT---LSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKERNLVNVE 268 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~---~~~v~l~~CGhVfc~~Ci~~~~k~~~~CPvC~~~f~~~diI~L~ 268 (304)
+..+.||||.+.|.++ ...+++.+|||+||..||.+|+.....||+|+.++...+++.|.
T Consensus 8 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~~~ 70 (71)
T 3ng2_A 8 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRYHPIY 70 (71)
T ss_dssp TTCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHHCSBCTTTCCBCCCCSCCCCC
T ss_pred CCCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHcCCCCCCCCCccChhheeecc
Confidence 4578999999999775 34557889999999999999998888999999999998888763
No 7
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=99.13 E-value=2.4e-11 Score=86.65 Aligned_cols=58 Identities=24% Similarity=0.601 Sum_probs=50.6
Q ss_pred ceeccCccccccCC---cceEEEccCCccchHHHHHHHhhcCCCCCCCCCCCCCCCceEec
Q 022029 211 SFICPSCKVTLTNT---LSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKERNLVNVE 268 (304)
Q Consensus 211 ~~~CPIc~k~~~~~---~~~v~l~~CGhVfc~~Ci~~~~k~~~~CPvC~~~f~~~diI~L~ 268 (304)
.+.||||++.|.++ ...+++.+|||+||..|+.+|+.....||+|+.++...+++.|.
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~~~ 63 (64)
T 2xeu_A 3 MVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRYHPIY 63 (64)
T ss_dssp CCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHHCSBCTTTCCBCTTTCEEECC
T ss_pred CCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHcCCCCCCCCccCCccceeeee
Confidence 57899999999874 24456789999999999999998888999999999999998874
No 8
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=99.12 E-value=6.5e-11 Score=93.45 Aligned_cols=55 Identities=13% Similarity=0.092 Sum_probs=49.6
Q ss_pred CCceeccCccccccCCcceEEEccCCccchHHHHHHHhhcCCCCCCCCCCCCCCCceEe
Q 022029 209 DKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKERNLVNV 267 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~~~~CPvC~~~f~~~diI~L 267 (304)
...|.||||+..|.++ ++.+|||+||..||..|+.....||+|+.++...++++.
T Consensus 27 p~~~~CpI~~~~m~dP----V~~~cGhtf~r~~I~~~l~~~~~cP~~~~~l~~~~L~pn 81 (100)
T 2kre_A 27 PDEFRDPLMDTLMTDP----VRLPSGTIMDRSIILRHLLNSPTDPFNRQTLTESMLEPV 81 (100)
T ss_dssp STTTBCTTTCSBCSSE----EEETTTEEEEHHHHHHHTTSCSBCSSSCCBCCTTSSEEC
T ss_pred cHhhCCcCccCcccCC----eECCCCCEEchHHHHHHHHcCCCCCCCCCCCChhhceEC
Confidence 4579999999999999 456799999999999999878899999999998888874
No 9
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=99.10 E-value=6.9e-11 Score=88.08 Aligned_cols=54 Identities=17% Similarity=0.367 Sum_probs=47.2
Q ss_pred CCceeccCccccccCCcceEEEccCCccchHHHHHHHhhc-CCCCCCCCCCCCCCCceE
Q 022029 209 DKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAV-DKVCLVCNKPCKERNLVN 266 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~-~~~CPvC~~~f~~~diI~ 266 (304)
...+.||||.+.|.++ ++.+|||+||..||.+|+.. ...||+|+.++...++++
T Consensus 6 ~~~~~C~IC~~~~~~P----v~~~CgH~fc~~Ci~~~~~~~~~~CP~C~~~~~~~~l~~ 60 (78)
T 1t1h_A 6 PEYFRCPISLELMKDP----VIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTP 60 (78)
T ss_dssp SSSSSCTTTSCCCSSE----EEETTTEEEEHHHHHHHHTTTCCBCTTTCCBCSSCCCEE
T ss_pred cccCCCCCccccccCC----EEcCCCCeecHHHHHHHHHHCcCCCCCCcCCCChhhCcc
Confidence 4579999999999998 34589999999999999875 779999999998877765
No 10
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=99.09 E-value=5.2e-11 Score=88.34 Aligned_cols=59 Identities=19% Similarity=0.574 Sum_probs=48.1
Q ss_pred CCceeccCccccccCCcceEEEcc-CCccchHHHHHHHhhcC--CCCCCCCCCCCCCCceEecCCC
Q 022029 209 DKSFICPSCKVTLTNTLSLVALSS-CGHVFCKKCADKFMAVD--KVCLVCNKPCKERNLVNVEKGG 271 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~v~l~~-CGhVfc~~Ci~~~~k~~--~~CPvC~~~f~~~diI~L~~~g 271 (304)
...+.||||++.|.++ +..+ |||+||..||..|+... ..||+|+.++...|.+.-+..|
T Consensus 13 ~~~~~C~IC~~~~~~p----~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~~~~~~~~n~sg 74 (74)
T 2yur_A 13 PDELLCLICKDIMTDA----VVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDVSPDALSGPSSG 74 (74)
T ss_dssp CGGGSCSSSCCCCTTC----EECSSSCCEECTTHHHHHHHHSSSSCCSSSCCSSCCTTTTTCTTTC
T ss_pred CCCCCCcCCChHHhCC----eEcCCCCCHHHHHHHHHHHHhcCCCcCCCCCCcCCCccccccCCCC
Confidence 4578999999999997 3456 99999999999998744 6999999998777766555443
No 11
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.09 E-value=2.4e-11 Score=89.30 Aligned_cols=58 Identities=24% Similarity=0.393 Sum_probs=48.9
Q ss_pred CCceeccCccccccCCcceEEEccCCccchHHHHHHHhhcCCCCCCCCCCCCCCCceEecCC
Q 022029 209 DKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKERNLVNVEKG 270 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~~~~CPvC~~~f~~~diI~L~~~ 270 (304)
...+.|+||++.|.++ +..+|||+||..||..|+.....||+|+..+...+++....+
T Consensus 13 ~~~~~C~IC~~~~~~~----~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~p~~s 70 (71)
T 2d8t_A 13 LTVPECAICLQTCVHP----VSLPCKHVFCYLCVKGASWLGKRCALCRQEIPEDFLDSGPSS 70 (71)
T ss_dssp SSCCBCSSSSSBCSSE----EEETTTEEEEHHHHHHCTTCSSBCSSSCCBCCHHHHSCSCSC
T ss_pred CCCCCCccCCcccCCC----EEccCCCHHHHHHHHHHHHCCCcCcCcCchhCHhhccCCCCC
Confidence 4568999999999886 345899999999999998877899999999998777665444
No 12
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.09 E-value=9.2e-11 Score=84.82 Aligned_cols=52 Identities=21% Similarity=0.729 Sum_probs=45.5
Q ss_pred CCceeccCccccccCCcceEEEccCCccchHHHHHHHhh-cCCCCCCCCCCCCCCCc
Q 022029 209 DKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMA-VDKVCLVCNKPCKERNL 264 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k-~~~~CPvC~~~f~~~di 264 (304)
...+.||||.+.+.++. ..+|||+||..||.+|+. ....||+|+.++..++|
T Consensus 13 ~~~~~C~IC~~~~~~p~----~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~i 65 (66)
T 2ecy_A 13 EDKYKCEKCHLVLCSPK----QTECGHRFCESCMAALLSSSSPKCTACQESIVKDKV 65 (66)
T ss_dssp CCCEECTTTCCEESSCC----CCSSSCCCCHHHHHHHHTTSSCCCTTTCCCCCTTTC
T ss_pred CcCCCCCCCChHhcCee----ECCCCCHHHHHHHHHHHHhCcCCCCCCCcCCChhhc
Confidence 45799999999999883 369999999999999984 56799999999998776
No 13
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=99.08 E-value=2.9e-11 Score=102.98 Aligned_cols=79 Identities=28% Similarity=0.547 Sum_probs=47.0
Q ss_pred CCceeccCccccccCCcceEEEccCCccchHHHHHHHhhc-CCCCCCCCCCCCCCC-----------ceEecCCCccccc
Q 022029 209 DKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAV-DKVCLVCNKPCKERN-----------LVNVEKGGTGFAA 276 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~-~~~CPvC~~~f~~~d-----------iI~L~~~gtgfaa 276 (304)
...+.||||++.|.++ +.+.+|||+||..||..|+.. ...||+|+.++...+ |..|.+++++++.
T Consensus 52 ~~~~~C~IC~~~~~~p---~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~l~~~~~l~~~i~~~~~~~~~~~~ 128 (165)
T 2ckl_B 52 HSELMCPICLDMLKNT---MTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEA 128 (165)
T ss_dssp HHHHBCTTTSSBCSSE---EEETTTCCEEEHHHHHHHHHTTCCBCTTTCCBCCSGGGEEECHHHHHHHHHHC--------
T ss_pred CCCCCCcccChHhhCc---CEeCCCCChhHHHHHHHHHHhCcCCCCCCCCcCCCcccCCcCHHHHHHHHHHHcchhHHHH
Confidence 3568999999999986 455699999999999999875 778999999997544 3345688899999
Q ss_pred cCCeeeeeeccccc
Q 022029 277 HGDRLEARDFKHLG 290 (304)
Q Consensus 277 ~g~~~eak~~~~~~ 290 (304)
++..+.++..++..
T Consensus 129 ~~e~~~~~~~~~~~ 142 (165)
T 2ckl_B 129 HQERVLARINKHNN 142 (165)
T ss_dssp --------------
T ss_pred HHHHHHHHHHhhhh
Confidence 98777777655443
No 14
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=99.07 E-value=9.1e-11 Score=89.76 Aligned_cols=55 Identities=15% Similarity=0.079 Sum_probs=49.3
Q ss_pred CCceeccCccccccCCcceEEEccCCccchHHHHHHHhhcCCCCCCCCCCCCCCCceEe
Q 022029 209 DKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKERNLVNV 267 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~~~~CPvC~~~f~~~diI~L 267 (304)
...|.||||.+.|.++ ++.+|||+||..||..|+.....||+|+.++...++++.
T Consensus 12 p~~~~CpI~~~~m~dP----V~~~cGhtf~r~~I~~~l~~~~~cP~~~~~l~~~~l~pn 66 (85)
T 2kr4_A 12 PDEFRDPLMDTLMTDP----VRLPSGTVMDRSIILRHLLNSPTDPFNRQMLTESMLEPV 66 (85)
T ss_dssp CTTTBCTTTCSBCSSE----EECTTSCEEEHHHHHHHHHHCSBCTTTCCBCCGGGCEEC
T ss_pred chheECcccCchhcCC----eECCCCCEECHHHHHHHHhcCCCCCCCcCCCChHhcchH
Confidence 4579999999999999 466799999999999999878899999999998888764
No 15
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.06 E-value=1.3e-10 Score=88.13 Aligned_cols=61 Identities=26% Similarity=0.607 Sum_probs=49.3
Q ss_pred CCCceeccCccccccCCcceEEEccCCccchHHHHHHHhhcC---CCCCCCCCCCCCCCceEec
Q 022029 208 NDKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVD---KVCLVCNKPCKERNLVNVE 268 (304)
Q Consensus 208 ~~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~~---~~CPvC~~~f~~~diI~L~ 268 (304)
....+.||||.+.|.+.....++.+|||+||..||..|+... ..||+|+.++...+|..|.
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~i~~l~ 75 (88)
T 2ct2_A 12 LREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITRITSLTQLT 75 (88)
T ss_dssp CCSCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHCSSCBCCTTTCCCBCCSSTTTSE
T ss_pred ccCCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcCCCCcCCCCCCCcccchhHHHHH
Confidence 355789999999999854434566999999999999998754 7999999999877665443
No 16
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.05 E-value=1.9e-10 Score=84.45 Aligned_cols=52 Identities=27% Similarity=0.647 Sum_probs=44.5
Q ss_pred CCceeccCccccccCCcceEEEccCCccchHHHHHHHhh---cCCCCCCCCCCCCCCCc
Q 022029 209 DKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMA---VDKVCLVCNKPCKERNL 264 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k---~~~~CPvC~~~f~~~di 264 (304)
...+.||||++.|.++ ++.+|||+||..||..|+. ....||+|+.++..+++
T Consensus 18 ~~~~~C~IC~~~~~~~----~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~~ 72 (73)
T 2ysl_A 18 QEEVICPICLDILQKP----VTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRKNAI 72 (73)
T ss_dssp CCCCBCTTTCSBCSSE----EECTTCCEEEHHHHHHHCSSSCSCCCCSSSCCCCCCCCC
T ss_pred ccCCEeccCCcccCCe----EEcCCCChhhHHHHHHHHHcCCCCCCCCCCCCcCCcccC
Confidence 4578999999999986 3449999999999999985 45689999999988775
No 17
>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A
Probab=99.02 E-value=9.8e-11 Score=84.36 Aligned_cols=57 Identities=12% Similarity=0.211 Sum_probs=50.5
Q ss_pred ceeccCccccccCCcceEEEccCCccchHHHHHHHhhcCCCCCCCCCCCCCCCceEecCC
Q 022029 211 SFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKERNLVNVEKG 270 (304)
Q Consensus 211 ~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~~~~CPvC~~~f~~~diI~L~~~ 270 (304)
.|.||||++.+.++ |+..+|||+|+.+||.+|+..+..||+++.+++.+|+|+++.+
T Consensus 3 ~~~CpIs~~~m~dP---V~~~~sG~~yer~~I~~~l~~~~~cP~t~~~L~~~~Lip~~~~ 59 (61)
T 2bay_A 3 HMLCAISGKVPRRP---VLSPKSRTIFEKSLLEQYVKDTGNDPITNEPLSIEEIVEIVPS 59 (61)
T ss_dssp -CCCTTTCSCCSSE---EEETTTTEEEEHHHHHHHHHHHSBCTTTCCBCCGGGCEECCCC
T ss_pred eEEecCCCCCCCCC---EEeCCCCcEEcHHHHHHHHHhCCCCcCCcCCCChhhcEECccC
Confidence 48999999999998 3444999999999999999877789999999999999999865
No 18
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.02 E-value=1.7e-10 Score=83.37 Aligned_cols=54 Identities=26% Similarity=0.651 Sum_probs=46.1
Q ss_pred CCCceeccCccccccCC---cceEEEccCCccchHHHHHHHhhcCCCCCCCCCCCCC
Q 022029 208 NDKSFICPSCKVTLTNT---LSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKE 261 (304)
Q Consensus 208 ~~~~~~CPIc~k~~~~~---~~~v~l~~CGhVfc~~Ci~~~~k~~~~CPvC~~~f~~ 261 (304)
....+.||||++.|.++ .+.+++.+|||+||..||.+|+.....||+|+.++..
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 68 (69)
T 2ea6_A 12 PSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINH 68 (69)
T ss_dssp TTCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHHCSSCTTTCCCCCC
T ss_pred CCCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHcCCCCCCCCCccCc
Confidence 35678999999999875 3455678999999999999999888899999999864
No 19
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=99.02 E-value=2.8e-10 Score=89.45 Aligned_cols=55 Identities=7% Similarity=0.088 Sum_probs=49.6
Q ss_pred CCceeccCccccccCCcceEEEccCC-ccchHHHHHHHhhcCCCCCCCCCCCCCCCceEe
Q 022029 209 DKSFICPSCKVTLTNTLSLVALSSCG-HVFCKKCADKFMAVDKVCLVCNKPCKERNLVNV 267 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~v~l~~CG-hVfc~~Ci~~~~k~~~~CPvC~~~f~~~diI~L 267 (304)
...|.||||++.|.++ |+.+|| |+||..||..|+.....||+|+.++...++++.
T Consensus 20 p~~~~CpI~~~~m~dP----V~~~cG~htf~r~cI~~~l~~~~~cP~~~~~l~~~~L~pn 75 (98)
T 1wgm_A 20 CDEFLDPIMSTLMCDP----VVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQIRPN 75 (98)
T ss_dssp CTTTBCTTTCSBCSSE----EECTTTCCEEEHHHHHHHTTTSCBCTTTCSBCCTTTSEEC
T ss_pred cHhcCCcCccccccCC----eECCCCCeEECHHHHHHHHHhCCCCCCCCCCCChhhceEc
Confidence 3579999999999999 567999 999999999999877899999999998888874
No 20
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.02 E-value=3.4e-10 Score=83.43 Aligned_cols=60 Identities=28% Similarity=0.605 Sum_probs=47.9
Q ss_pred CCceeccCccccccCCcceEEEccCCccchHHHHHHHhhcCCCCCCCCCCCCCCCceEecCCC
Q 022029 209 DKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKERNLVNVEKGG 271 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~~~~CPvC~~~f~~~diI~L~~~g 271 (304)
+....|+||++.|.+...++ +.+|||+||..||.+|+.....||+|+.++.. +..+..+.
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~-~~~C~H~f~~~Ci~~~~~~~~~CP~Cr~~~~~--~~~~~~~s 72 (74)
T 2ep4_A 13 NLHELCAVCLEDFKPRDELG-ICPCKHAFHRKCLIKWLEVRKVCPLCNMPVLQ--LAQLSGPS 72 (74)
T ss_dssp CCSCBCSSSCCBCCSSSCEE-EETTTEEEEHHHHHHHHHHCSBCTTTCCBCSS--CCSCCCSC
T ss_pred CCCCCCcCCCcccCCCCcEE-EcCCCCEecHHHHHHHHHcCCcCCCcCccccc--ccccCCCC
Confidence 45679999999998876554 44899999999999999878899999999864 44444333
No 21
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.01 E-value=3.6e-10 Score=84.78 Aligned_cols=55 Identities=27% Similarity=0.583 Sum_probs=47.3
Q ss_pred CCceeccCccccccCCcceEEEccCCccchHHHHHHHhhc------CCCCCCCCCCCCCCCceEe
Q 022029 209 DKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAV------DKVCLVCNKPCKERNLVNV 267 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~------~~~CPvC~~~f~~~diI~L 267 (304)
...+.||||.+.|.++ ++.+|||+||..||..|+.. ...||+|+.++...+++..
T Consensus 17 ~~~~~C~IC~~~~~~p----~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~~~~~n 77 (85)
T 2ecw_A 17 KEEVTCPICLELLKEP----VSADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYPFGNLKPN 77 (85)
T ss_dssp CTTTSCTTTCSCCSSC----EECTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCCTTCCEEC
T ss_pred ccCCCCcCCChhhCcc----eeCCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCCHHhCCcC
Confidence 4568999999999987 35689999999999999875 6799999999998777653
No 22
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=99.01 E-value=2.2e-10 Score=79.46 Aligned_cols=52 Identities=21% Similarity=0.593 Sum_probs=45.0
Q ss_pred CCceeccCccccccCCcceEEEccCCccchHHHHHHHhhcCCCCCCCCCCCC
Q 022029 209 DKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCK 260 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~~~~CPvC~~~f~ 260 (304)
.....||||++.|.+....+++.+|||+||..||.+|+.....||+|+.++.
T Consensus 3 ~~~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 54 (55)
T 2ecm_A 3 SGSSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLCSGPSS 54 (55)
T ss_dssp SCCCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHHTCCCTTSCCSSC
T ss_pred CCCCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHcCCcCCCCCCcCC
Confidence 3467899999999775556678899999999999999987799999998874
No 23
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.01 E-value=3.6e-10 Score=84.91 Aligned_cols=49 Identities=27% Similarity=0.786 Sum_probs=43.7
Q ss_pred CCCceeccCccccccCCcceEEEccCCccchHHHHHHHhhcCCCCCCCCCCCC
Q 022029 208 NDKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCK 260 (304)
Q Consensus 208 ~~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~~~~CPvC~~~f~ 260 (304)
.+..+.||||++.|.++ ++.+|||+||..||..|+.....||+|+.++.
T Consensus 12 ~~~~~~C~IC~~~~~~p----~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~ 60 (81)
T 2csy_A 12 EEIPFRCFICRQAFQNP----VVTKCRHYFCESCALEHFRATPRCYICDQPTG 60 (81)
T ss_dssp CCCCSBCSSSCSBCCSE----EECTTSCEEEHHHHHHHHHHCSBCSSSCCBCC
T ss_pred CCCCCCCcCCCchhcCe----eEccCCCHhHHHHHHHHHHCCCcCCCcCcccc
Confidence 35578999999999886 45799999999999999988889999999986
No 24
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.99 E-value=5.3e-10 Score=82.77 Aligned_cols=68 Identities=19% Similarity=0.507 Sum_probs=52.2
Q ss_pred CCCCceeeecccCCCcccccCCCCCceeccCccccccCCcceEEEccCCccchHHHHHHHhhcCCCCCCCCCCCCC
Q 022029 186 KLKSLFPVYFTEDKSEEKKSSSNDKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKE 261 (304)
Q Consensus 186 ~lKDLi~l~f~~~~~~~~~~~~~~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~~~~CPvC~~~f~~ 261 (304)
.++.|-.+.|..... ......|+||++.|.+... ++..+|||+||..||..|+.....||+|+.++..
T Consensus 5 ~i~~lp~~~~~~~~~-------~~~~~~C~IC~~~~~~~~~-~~~l~C~H~fh~~Ci~~w~~~~~~CP~Cr~~~~~ 72 (75)
T 1x4j_A 5 SSGQLPSYRFNPNNH-------QSEQTLCVVCMCDFESRQL-LRVLPCNHEFHAKCVDKWLKANRTCPICRADSGP 72 (75)
T ss_dssp CCSSCCCEEBCSSSC-------SSSCCEETTTTEECCBTCE-EEEETTTEEEETTHHHHHHHHCSSCTTTCCCCCC
T ss_pred hHhhCCcEEecCccc-------cCCCCCCeECCcccCCCCe-EEEECCCCHhHHHHHHHHHHcCCcCcCcCCcCCC
Confidence 345565566654331 2456799999999988754 4455899999999999999888899999998865
No 25
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.98 E-value=1e-10 Score=85.36 Aligned_cols=58 Identities=24% Similarity=0.522 Sum_probs=49.5
Q ss_pred CCceeccCccccccCCcceEEEccCCccchHHHHHHHhhcCCCCCCCCCCCCCCCceEecCCC
Q 022029 209 DKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKERNLVNVEKGG 271 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~~~~CPvC~~~f~~~diI~L~~~g 271 (304)
...+.|+||++.+.+ ++.+|||+||..||.+|+.....||+|+.++...+.+.+.++|
T Consensus 13 ~~~~~C~IC~~~~~~-----~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~~~~~G 70 (70)
T 2ecn_A 13 TDEEECCICMDGRAD-----LILPCAHSFCQKCIDKWSDRHRNCPICRLQMTGANESSGPSSG 70 (70)
T ss_dssp CCCCCCSSSCCSCCS-----EEETTTEEECHHHHHHSSCCCSSCHHHHHCTTCCCCCCCCCCC
T ss_pred CCCCCCeeCCcCccC-----cccCCCCcccHHHHHHHHHCcCcCCCcCCcccCCCccccCCCC
Confidence 456899999999987 3569999999999999988888999999999987776666554
No 26
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=98.98 E-value=6.4e-10 Score=85.35 Aligned_cols=54 Identities=20% Similarity=0.621 Sum_probs=43.8
Q ss_pred CCCceeccCccccccCCcceEEEcc-CCccchHHHHHHHhhc--CCCCCCCCCCCC-CCCce
Q 022029 208 NDKSFICPSCKVTLTNTLSLVALSS-CGHVFCKKCADKFMAV--DKVCLVCNKPCK-ERNLV 265 (304)
Q Consensus 208 ~~~~~~CPIc~k~~~~~~~~v~l~~-CGhVfc~~Ci~~~~k~--~~~CPvC~~~f~-~~diI 265 (304)
....+.||||.+.|.++ ++.+ |||+||..||..|+.. ...||+|+.++. ..+++
T Consensus 10 ~~~~~~C~IC~~~~~~p----~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~~~~~~~ 67 (92)
T 3ztg_A 10 IPDELLCLICKDIMTDA----VVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDVSPDALI 67 (92)
T ss_dssp CCTTTEETTTTEECSSC----EECTTTCCEECHHHHHHHHHHCTTCCCTTTCCSSCCTTSCE
T ss_pred CCcCCCCCCCChhhcCc----eECCCCCCHHHHHHHHHHHHhcCCCcCcCCCCcCCCccccC
Confidence 45679999999999998 3457 9999999999999863 369999999984 44443
No 27
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=98.95 E-value=3.1e-10 Score=89.04 Aligned_cols=56 Identities=25% Similarity=0.596 Sum_probs=48.0
Q ss_pred CCceeccCccccccCCcceEEEccCCccchHHHHHHHhhcC-CCCCCCCCCCCCCCceEe
Q 022029 209 DKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVD-KVCLVCNKPCKERNLVNV 267 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~~-~~CPvC~~~f~~~diI~L 267 (304)
+..+.||||++.|.++ +.+.+|||+||..||..|+... ..||+|+.++...+++..
T Consensus 20 ~~~~~C~IC~~~~~~p---~~~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~~~~l~~~ 76 (100)
T 3lrq_A 20 AEVFRCFICMEKLRDA---RLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLRELVNC 76 (100)
T ss_dssp HHHTBCTTTCSBCSSE---EECTTTCCEEEHHHHHHHHHHTCSBCTTTCCBCCGGGCEEC
T ss_pred CCCCCCccCCccccCc---cccCCCCChhhHHHHHHHHHHCcCCCCCCCCcCCHHHhHhh
Confidence 3468999999999987 3338999999999999998866 699999999998887764
No 28
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=98.95 E-value=2e-10 Score=85.44 Aligned_cols=54 Identities=28% Similarity=0.579 Sum_probs=45.5
Q ss_pred CCCceeccCccccccCCcceEEEccCCccchHHHHHHHhhc-------CCCCCCCCCCCCCCCce
Q 022029 208 NDKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAV-------DKVCLVCNKPCKERNLV 265 (304)
Q Consensus 208 ~~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~-------~~~CPvC~~~f~~~diI 265 (304)
....+.||||++.|.++. +.+|||+||..||.+|+.. ...||+|+.++...++.
T Consensus 9 ~~~~~~C~IC~~~~~~p~----~l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~~~l~ 69 (79)
T 2egp_A 9 VQEEVTCPICLELLTEPL----SLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFEHLQ 69 (79)
T ss_dssp CCCCCEETTTTEECSSCC----CCSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCSSGGG
T ss_pred cccCCCCcCCCcccCCee----ECCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCCHhhCC
Confidence 356799999999999873 3599999999999998764 57999999999876654
No 29
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=98.95 E-value=4.4e-10 Score=78.01 Aligned_cols=52 Identities=25% Similarity=0.590 Sum_probs=44.4
Q ss_pred CCceeccCccccccCCcceEEEccCCccchHHHHHHHhhcCCCCCCCCCCCC
Q 022029 209 DKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCK 260 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~~~~CPvC~~~f~ 260 (304)
+....|+||++.|.+....+.+..|||+||..||.+|+.....||+|+.++.
T Consensus 3 ~~~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~~~~CP~Cr~~~~ 54 (55)
T 1iym_A 3 DDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTVV 54 (55)
T ss_dssp CCSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTTCCSCSSSCCCSC
T ss_pred CCCCcCccCCccccCCCceEECCCCCCcccHHHHHHHHHcCCcCcCCCCEeE
Confidence 4567899999999886665656569999999999999988889999998764
No 30
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.93 E-value=4.7e-10 Score=84.11 Aligned_cols=54 Identities=30% Similarity=0.665 Sum_probs=45.9
Q ss_pred CCceeccCccccccCCcceEEEccCCccchHHHHHHHhhc------CCCCCCCCCCCCCCCceE
Q 022029 209 DKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAV------DKVCLVCNKPCKERNLVN 266 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~------~~~CPvC~~~f~~~diI~ 266 (304)
...+.||||.+.|.++. +.+|||+||..|+..|+.. ...||+|+..+...++++
T Consensus 17 ~~~~~C~IC~~~~~~p~----~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~~~~~ 76 (85)
T 2ecv_A 17 KEEVTCPICLELLTQPL----SLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPENIRP 76 (85)
T ss_dssp CCCCCCTTTCSCCSSCB----CCSSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSCSSSCCC
T ss_pred cCCCCCCCCCcccCCce----eCCCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccCHHhcCc
Confidence 45689999999999872 4599999999999999865 689999999998876654
No 31
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=98.93 E-value=5.8e-10 Score=90.28 Aligned_cols=63 Identities=24% Similarity=0.591 Sum_probs=53.9
Q ss_pred CCceeccCccccccCC---cceEEEccCCccchHHHHHHHhhcCCCCCCCCCCCCCCCceEecCCC
Q 022029 209 DKSFICPSCKVTLTNT---LSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKERNLVNVEKGG 271 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~---~~~v~l~~CGhVfc~~Ci~~~~k~~~~CPvC~~~f~~~diI~L~~~g 271 (304)
.+.+.||||++.|.++ .+.+++.+|||+||..||.+|++....||+|++.+...+++.+....
T Consensus 5 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~l~~l~i~~ 70 (133)
T 4ap4_A 5 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRYHPIYIGS 70 (133)
T ss_dssp CCSCBCTTTCCBHHHHHHTTCCEEEETTCCEEEHHHHHHHHTTCSBCTTTCCBCTTTCEEECBCSS
T ss_pred CCCCCCcccChhhhCccccccCeEecCCCChhhHHHHHHHHHhCCCCCCCCCcCccccccccccCC
Confidence 3568999999999876 34456789999999999999998888999999999999998876543
No 32
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=98.93 E-value=4.6e-10 Score=87.53 Aligned_cols=54 Identities=24% Similarity=0.594 Sum_probs=46.3
Q ss_pred CceeccCccccccCCcceEEEccCCccchHHHHHHHhhcCCCCCCCCCCCCCCCceE
Q 022029 210 KSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKERNLVN 266 (304)
Q Consensus 210 ~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~~~~CPvC~~~f~~~diI~ 266 (304)
..+.||||.+.|.++ +.+.+|||+||..||..|+.....||+|+.++...+++.
T Consensus 21 ~~~~C~IC~~~~~~p---~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~l~~ 74 (99)
T 2y43_A 21 DLLRCGICFEYFNIA---MIIPQCSHNYCSLCIRKFLSYKTQCPTCCVTVTEPDLKN 74 (99)
T ss_dssp HHTBCTTTCSBCSSE---EECTTTCCEEEHHHHHHHHTTCCBCTTTCCBCCGGGCEE
T ss_pred CCCCcccCChhhCCc---CEECCCCCHhhHHHHHHHHHCCCCCCCCCCcCChhhCCc
Confidence 458999999999986 345599999999999999987889999999998766554
No 33
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=98.92 E-value=1e-09 Score=79.44 Aligned_cols=60 Identities=23% Similarity=0.588 Sum_probs=48.0
Q ss_pred CceeccCccccccCCcceEEEccCCccchHHHHHHHhhcCCCCCCCCCCCCCCCceEecCCCccc
Q 022029 210 KSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKERNLVNVEKGGTGF 274 (304)
Q Consensus 210 ~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~~~~CPvC~~~f~~~diI~L~~~gtgf 274 (304)
....||||.+.+.++ +++.+|||+||..|+..|+.....||+|+.++. .++........|
T Consensus 4 ~~~~C~IC~~~~~~~---~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~--~~~~~~~~d~~~ 63 (68)
T 1chc_A 4 VAERCPICLEDPSNY---SMALPCLHAFCYVCITRWIRQNPTCPLCKVPVE--SVVHTIESDSEF 63 (68)
T ss_dssp CCCCCSSCCSCCCSC---EEETTTTEEESTTHHHHHHHHSCSTTTTCCCCC--CEECCCCSCCCC
T ss_pred CCCCCeeCCccccCC---cEecCCCCeeHHHHHHHHHhCcCcCcCCChhhH--hhhhccccchHh
Confidence 457899999999886 357899999999999999988889999999987 355444444444
No 34
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=98.88 E-value=1.5e-09 Score=81.80 Aligned_cols=68 Identities=21% Similarity=0.416 Sum_probs=50.1
Q ss_pred CCCceeccCccccccCCcceEEEccCCccchHHHHHHHhh-cCCCCCCCCCCCCCCCceEecCCCcccc
Q 022029 208 NDKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMA-VDKVCLVCNKPCKERNLVNVEKGGTGFA 275 (304)
Q Consensus 208 ~~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k-~~~~CPvC~~~f~~~diI~L~~~gtgfa 275 (304)
++..+.||||.+.++.....+..-+|||.||..|+..++. ....||+|+++|...+++..+.+...|+
T Consensus 8 ~~~~~~CpICle~~~~~d~~~~p~~CGH~fC~~Cl~~~~~~~~~~CP~CR~~~~~~~~~~~~~~~~~~~ 76 (78)
T 1e4u_A 8 KEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPEDPAVYKPLSQEELQ 76 (78)
T ss_dssp CCCCCBCTTTCCBCCTTTTTCCSSTTSCCCCHHHHHHHTTSSCSBCTTTCCBCSSCSSCCCSCCCSSCC
T ss_pred cccCCcCCccCccCccccccccccCCCCCcCHHHHHHHHhcCCCCCCCCCCccCCCchhhccCCHHHHh
Confidence 3567899999999864311111124999999999999874 4578999999999888876665554443
No 35
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=98.87 E-value=1.2e-09 Score=86.46 Aligned_cols=51 Identities=22% Similarity=0.688 Sum_probs=44.6
Q ss_pred CCceeccCccccccCCcceEEEccCCccchHHHHHHHhhcCCCCCCCCCCCCCC
Q 022029 209 DKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKER 262 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~~~~CPvC~~~f~~~ 262 (304)
...+.||||.+.|.++ +.+.+|||+||..||..|+.....||+|+..+...
T Consensus 13 ~~~~~C~IC~~~~~~p---~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~ 63 (108)
T 2ckl_A 13 NPHLMCVLCGGYFIDA---TTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKT 63 (108)
T ss_dssp GGGTBCTTTSSBCSSE---EEETTTCCEEEHHHHHHHHTSCSBCTTTCCBSCSS
T ss_pred CCcCCCccCChHHhCc---CEeCCCCChhhHHHHHHHHHhCCcCcCCCcccccc
Confidence 3468999999999987 44569999999999999998888999999999864
No 36
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.86 E-value=2.3e-09 Score=76.52 Aligned_cols=43 Identities=33% Similarity=0.720 Sum_probs=37.0
Q ss_pred CCceeccCccccccCCcceEEEccCCccchHHHHHHHhh---cCCCCCCC
Q 022029 209 DKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMA---VDKVCLVC 255 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k---~~~~CPvC 255 (304)
+..+.||||++.|.++ ++.+|||+||..||.+|+. ....||+|
T Consensus 18 ~~~~~C~IC~~~~~~p----~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 18 QEEVICPICLDILQKP----VTIDCGHNFCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp CCCCBCTTTCSBCSSC----EECTTSSEECHHHHHHHHHHCSSCCCCSCC
T ss_pred ccCCCCCcCCchhCCe----EEeCCCCcchHHHHHHHHHcCCCCCcCcCC
Confidence 4578999999999987 3449999999999999987 45689998
No 37
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.86 E-value=1.2e-09 Score=84.87 Aligned_cols=55 Identities=20% Similarity=0.553 Sum_probs=45.1
Q ss_pred CCceeccCccccccCCcceEEEccCCccchHHHHHHHhhc------CCCCCC--CCCC-CCCCCceE
Q 022029 209 DKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAV------DKVCLV--CNKP-CKERNLVN 266 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~------~~~CPv--C~~~-f~~~diI~ 266 (304)
...|.||||++.|.++ |.+..|||+||..||..|+.. ...||+ |... +...++++
T Consensus 5 ~~~~~CPI~~~~~~dP---V~~~~cGh~f~r~cI~~~l~~~~~~~~~~~CP~tgc~~~~l~~~~L~p 68 (94)
T 2yu4_A 5 SSGFTCPITKEEMKKP---VKNKVCGHTYEEDAIVRMIESRQKRKKKAYCPQIGCSHTDIRKSDLIQ 68 (94)
T ss_dssp SSCCBCTTTCSBCSSE---EEESSSCCEEEHHHHHHHHHHHHTTTCCBCCCSTTCCCCCBCGGGEEE
T ss_pred CcEeECcCcCchhcCC---EEcCCCCCeecHHHHHHHHHHccCcCCCCCCCcCcCcccccCHhhCcC
Confidence 4579999999999998 334459999999999999864 359999 7766 77777775
No 38
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=98.86 E-value=2.8e-09 Score=77.41 Aligned_cols=52 Identities=25% Similarity=0.559 Sum_probs=44.1
Q ss_pred CCceeccCccccccCCcceEEEccCCccchHHHHHHHhhcCCCCCCCCCCCCC
Q 022029 209 DKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKE 261 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~~~~CPvC~~~f~~ 261 (304)
+....|+||+..|.+... ++..+|||+||..||..|+.....||+|+..+..
T Consensus 12 ~~~~~C~IC~~~~~~~~~-~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 63 (69)
T 2kiz_A 12 DTEEKCTICLSILEEGED-VRRLPCMHLFHQVCVDQWLITNKKCPICRVDIEA 63 (69)
T ss_dssp TCCCSBTTTTBCCCSSSC-EEECTTSCEEEHHHHHHHHHHCSBCTTTCSBSCS
T ss_pred CCCCCCeeCCccccCCCc-EEEeCCCCHHHHHHHHHHHHcCCCCcCcCccccC
Confidence 556899999999976544 4466899999999999999888899999998864
No 39
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=98.85 E-value=1.2e-09 Score=90.42 Aligned_cols=47 Identities=26% Similarity=0.668 Sum_probs=41.9
Q ss_pred ceeccCccccccCCcceEEEccCCccchHHHHHHHhhcCCCCCCCCCCCCC
Q 022029 211 SFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKE 261 (304)
Q Consensus 211 ~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~~~~CPvC~~~f~~ 261 (304)
.+.||||.+.|.++ ++.+|||+||..||..|+.....||+|+.++..
T Consensus 53 ~~~C~iC~~~~~~~----~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 99 (138)
T 4ayc_A 53 ELQCIICSEYFIEA----VTLNCAHSFCSYCINEWMKRKIECPICRKDIKS 99 (138)
T ss_dssp HSBCTTTCSBCSSE----EEETTSCEEEHHHHHHHTTTCSBCTTTCCBCCC
T ss_pred cCCCcccCcccCCc----eECCCCCCccHHHHHHHHHcCCcCCCCCCcCCC
Confidence 46899999999887 456999999999999999888899999999864
No 40
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=98.83 E-value=2.9e-09 Score=84.87 Aligned_cols=60 Identities=20% Similarity=0.330 Sum_probs=46.5
Q ss_pred ceeccCccccccCCc--------------ceEEEccCCccchHHHHHHHhh-----cCCCCCCCCCCCCCCCceEecCCC
Q 022029 211 SFICPSCKVTLTNTL--------------SLVALSSCGHVFCKKCADKFMA-----VDKVCLVCNKPCKERNLVNVEKGG 271 (304)
Q Consensus 211 ~~~CPIc~k~~~~~~--------------~~v~l~~CGhVfc~~Ci~~~~k-----~~~~CPvC~~~f~~~diI~L~~~g 271 (304)
...||||++.|.++. .++.+.+|||+||..||..|+. ....||+|+..|... .-.++.|
T Consensus 25 ~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~~~--~g~qp~g 102 (114)
T 1v87_A 25 EEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGEK--TGTQPWG 102 (114)
T ss_dssp SCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSSSC--SSSCTTS
T ss_pred CCcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCccCCC--CCCCCCC
Confidence 358999999996642 3556889999999999999983 467999999999753 3445554
Q ss_pred c
Q 022029 272 T 272 (304)
Q Consensus 272 t 272 (304)
+
T Consensus 103 ~ 103 (114)
T 1v87_A 103 K 103 (114)
T ss_dssp S
T ss_pred e
Confidence 3
No 41
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=98.82 E-value=2e-09 Score=87.26 Aligned_cols=48 Identities=23% Similarity=0.553 Sum_probs=41.6
Q ss_pred CceeccCccccccCCcceEEEccCCccchHHHHHHHhhc-CCCCCCCCCCCCC
Q 022029 210 KSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAV-DKVCLVCNKPCKE 261 (304)
Q Consensus 210 ~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~-~~~CPvC~~~f~~ 261 (304)
..+.||||.+.|.++ +..+|||+||..||..|+.. ...||+|+.++..
T Consensus 51 ~~~~C~IC~~~~~~p----~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 51 ETFQCICCQELVFRP----ITTVCQHNVCKDCLDRSFRAQVFSCPACRYDLGR 99 (124)
T ss_dssp HHTBCTTTSSBCSSE----EECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCT
T ss_pred cCCCCCcCChHHcCc----EEeeCCCcccHHHHHHHHhHCcCCCCCCCccCCC
Confidence 357999999999987 34599999999999999874 4599999999976
No 42
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.82 E-value=1.7e-09 Score=85.63 Aligned_cols=54 Identities=28% Similarity=0.693 Sum_probs=45.7
Q ss_pred CceeccCccccccCCcceEEEccCCccchHHHHHHHhhcC---CCCCCCCCCCCCCCceEe
Q 022029 210 KSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVD---KVCLVCNKPCKERNLVNV 267 (304)
Q Consensus 210 ~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~~---~~CPvC~~~f~~~diI~L 267 (304)
..+.||||.+.|.++. +.+|||+||..||..|+... ..||+|+.++...+++..
T Consensus 20 ~~~~C~IC~~~~~~p~----~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~~~~~ 76 (112)
T 1jm7_A 20 KILECPICLELIKEPV----STKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQES 76 (112)
T ss_dssp HHTSCSSSCCCCSSCC----BCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCTTTCBCC
T ss_pred CCCCCcccChhhcCeE----ECCCCCHHHHHHHHHHHHhCCCCCCCcCCCCcCCHhhcCcc
Confidence 3579999999999873 46999999999999998743 489999999998777654
No 43
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=98.81 E-value=3.6e-09 Score=81.48 Aligned_cols=52 Identities=21% Similarity=0.454 Sum_probs=43.9
Q ss_pred CCceeccCccccccCCcceEEEccCCccchHHHHHHHhhcCCCCCCCCCCCCC
Q 022029 209 DKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKE 261 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~~~~CPvC~~~f~~ 261 (304)
.....|+||++.|.+...++ ..+|||+||..||..|+.....||+|+..+..
T Consensus 38 ~~~~~C~IC~~~~~~~~~~~-~l~C~H~Fh~~Ci~~wl~~~~~CP~Cr~~~~~ 89 (91)
T 2l0b_A 38 GQEMCCPICCSEYVKGDVAT-ELPCHHYFHKPCVSIWLQKSGTCPVCRCMFPP 89 (91)
T ss_dssp SSCSEETTTTEECCTTCEEE-EETTTEEEEHHHHHHHHTTTCBCTTTCCBSSC
T ss_pred CCCCCCcccChhhcCCCcEE-ecCCCChHHHHHHHHHHHcCCcCcCcCccCCC
Confidence 45689999999998765444 45799999999999999888899999998864
No 44
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=98.80 E-value=2.1e-09 Score=86.66 Aligned_cols=54 Identities=31% Similarity=0.644 Sum_probs=45.7
Q ss_pred CCceeccCccccccCCcceEEEccCCccchHHHHHHHhhcC-CCCCCCCCCCCCCCceE
Q 022029 209 DKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVD-KVCLVCNKPCKERNLVN 266 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~~-~~CPvC~~~f~~~diI~ 266 (304)
...+.||||...|.++ +..+|||+||..||..|+... ..||+|+.++...+++.
T Consensus 16 ~~~~~C~IC~~~~~~p----~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~ 70 (118)
T 3hct_A 16 ESKYECPICLMALREA----VQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFP 70 (118)
T ss_dssp CGGGBCTTTCSBCSSE----EECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCGGGCEE
T ss_pred CCCCCCCcCChhhcCe----EECCcCChhhHHHHHHHHhhCCCCCCCCCCCcCHHhccc
Confidence 4578999999999987 345899999999999998744 49999999998876654
No 45
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.78 E-value=2e-09 Score=97.64 Aligned_cols=53 Identities=9% Similarity=0.162 Sum_probs=46.4
Q ss_pred CceeccCccccccCCcceEEEccCCccchHHHHHHHhhc-CCCCCCCCCCCCCCCceE
Q 022029 210 KSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAV-DKVCLVCNKPCKERNLVN 266 (304)
Q Consensus 210 ~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~-~~~CPvC~~~f~~~diI~ 266 (304)
..+.||||.+.|.++ |+.+|||+||..||..++.. ...||+|+.++...++++
T Consensus 207 ~~~~c~i~~~~~~dP----v~~~~gh~f~~~~i~~~~~~~~~~cP~~~~~~~~~~l~~ 260 (281)
T 2c2l_A 207 DYLCGKISFELMREP----CITPSGITYDRKDIEEHLQRVGHFNPVTRSPLTQEQLIP 260 (281)
T ss_dssp STTBCTTTCSBCSSE----EECSSCCEEETTHHHHHHHHTCSSCTTTCCCCCGGGCEE
T ss_pred cccCCcCcCCHhcCC----eECCCCCEECHHHHHHHHHHCCCCCcCCCCCCchhcCcc
Confidence 468999999999999 56789999999999999874 345999999999878776
No 46
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=98.76 E-value=4.6e-09 Score=91.22 Aligned_cols=55 Identities=9% Similarity=0.108 Sum_probs=47.7
Q ss_pred CCceeccCccccccCCcceEEEccCCccchHHHHHHHhhcC-CCCCCCCCCCCCCCceEe
Q 022029 209 DKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVD-KVCLVCNKPCKERNLVNV 267 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~~-~~CPvC~~~f~~~diI~L 267 (304)
...|.||||+..|.++ |+.+|||+||..||..|+... ..||+|+.++...++++.
T Consensus 104 p~~f~CPI~~elm~DP----V~~~~Ghtfer~~I~~~l~~~~~tcP~t~~~l~~~~L~pN 159 (179)
T 2f42_A 104 PDYLCGKISFELMREP----CITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQDQLIPN 159 (179)
T ss_dssp CGGGBCTTTCSBCSSE----EECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCGGGCEEC
T ss_pred cHhhcccCccccCCCC----eECCCCCEECHHHHHHHHHhCCCCCCCCcCCCChhhCcch
Confidence 4579999999999998 456999999999999998753 369999999998888874
No 47
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=98.75 E-value=4.8e-09 Score=88.39 Aligned_cols=50 Identities=22% Similarity=0.583 Sum_probs=43.1
Q ss_pred CceeccCccccccCCcceEEEccCCccchHHHHHHHhhcC-CCCCCCCCCCCCCC
Q 022029 210 KSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVD-KVCLVCNKPCKERN 263 (304)
Q Consensus 210 ~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~~-~~CPvC~~~f~~~d 263 (304)
..+.||||.+.|.++ ++.+|||+||..||..|+... ..||+|+.++...+
T Consensus 77 ~~~~C~IC~~~~~~p----v~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~ 127 (150)
T 1z6u_A 77 QSFMCVCCQELVYQP----VTTECFHNVCKDCLQRSFKAQVFSCPACRHDLGQNY 127 (150)
T ss_dssp HHTBCTTTSSBCSSE----EECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCTTC
T ss_pred cCCEeecCChhhcCC----EEcCCCCchhHHHHHHHHHhCCCcCCCCCccCCCCC
Confidence 358999999999987 457999999999999998754 48999999998763
No 48
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=98.75 E-value=3.3e-09 Score=84.93 Aligned_cols=53 Identities=32% Similarity=0.761 Sum_probs=45.8
Q ss_pred CceeccCccccccCCcceEEEccCCccchHHHHHHHhhc-CCCCCCCCCCCCCCCceE
Q 022029 210 KSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAV-DKVCLVCNKPCKERNLVN 266 (304)
Q Consensus 210 ~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~-~~~CPvC~~~f~~~diI~ 266 (304)
..+.||||.+.|.++ +..+|||+||..||.+|+.. ...||+|+.++...+++.
T Consensus 22 ~~~~C~IC~~~~~~p----~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~ 75 (116)
T 1rmd_A 22 KSISCQICEHILADP----VETSCKHLFCRICILRCLKVMGSYCPSCRYPCFPTDLES 75 (116)
T ss_dssp HHTBCTTTCSBCSSE----EECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCGGGCBC
T ss_pred CCCCCCCCCcHhcCc----EEcCCCCcccHHHHHHHHhHCcCcCCCCCCCCCHhhccc
Confidence 358999999999987 34699999999999999875 679999999998877654
No 49
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.74 E-value=5.8e-09 Score=72.84 Aligned_cols=43 Identities=33% Similarity=0.768 Sum_probs=36.6
Q ss_pred CCceeccCccccccCCcceEEEccCCccchHHHHHHHhh---cCCCCCCC
Q 022029 209 DKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMA---VDKVCLVC 255 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k---~~~~CPvC 255 (304)
+..+.||||++.|.++ ++.+|||+||..||.+|+. ....||+|
T Consensus 13 ~~~~~C~IC~~~~~~p----~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 13 QVEASCSVCLEYLKEP----VIIECGHNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp CCCCBCSSSCCBCSSC----CCCSSCCCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred ccCCCCccCCcccCcc----EeCCCCCccCHHHHHHHHHhcCCCCCCCCC
Confidence 4578999999999997 3468999999999999953 45789998
No 50
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=98.70 E-value=1.6e-08 Score=77.09 Aligned_cols=36 Identities=22% Similarity=0.129 Sum_probs=33.1
Q ss_pred cCCCcceecccCCCCCceecCCCceeehhhHHHHHH
Q 022029 37 IKPFDACCLCLKPFIDPLCCQKGHIYCKECILECLL 72 (304)
Q Consensus 37 ~~~F~~C~LcL~p~~dPV~t~~G~lyckEcIle~ll 72 (304)
+-....|.||+..+.|||+++.||.||+.||..||.
T Consensus 11 ~p~~~~CpI~~~~m~dPV~~~cGhtf~r~~I~~~l~ 46 (85)
T 2kr4_A 11 APDEFRDPLMDTLMTDPVRLPSGTVMDRSIILRHLL 46 (85)
T ss_dssp CCTTTBCTTTCSBCSSEEECTTSCEEEHHHHHHHHH
T ss_pred CchheECcccCchhcCCeECCCCCEECHHHHHHHHh
Confidence 445789999999999999999999999999999985
No 51
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.69 E-value=1.5e-08 Score=78.60 Aligned_cols=34 Identities=21% Similarity=0.319 Sum_probs=30.9
Q ss_pred CcceecccCCCCCceecC-CCceeehhhHHHHHHH
Q 022029 40 FDACCLCLKPFIDPLCCQ-KGHIYCKECILECLLS 73 (304)
Q Consensus 40 F~~C~LcL~p~~dPV~t~-~G~lyckEcIle~ll~ 73 (304)
...|.||+..+.|||+++ .||.||++||.+||..
T Consensus 7 ~~~CPI~~~~~~dPV~~~~cGh~f~r~cI~~~l~~ 41 (94)
T 2yu4_A 7 GFTCPITKEEMKKPVKNKVCGHTYEEDAIVRMIES 41 (94)
T ss_dssp CCBCTTTCSBCSSEEEESSSCCEEEHHHHHHHHHH
T ss_pred EeECcCcCchhcCCEEcCCCCCeecHHHHHHHHHH
Confidence 356999999999999996 9999999999999964
No 52
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=98.67 E-value=1.5e-08 Score=79.88 Aligned_cols=37 Identities=24% Similarity=0.138 Sum_probs=33.3
Q ss_pred CcCCCcceecccCCCCCceecCCCceeehhhHHHHHH
Q 022029 36 SIKPFDACCLCLKPFIDPLCCQKGHIYCKECILECLL 72 (304)
Q Consensus 36 s~~~F~~C~LcL~p~~dPV~t~~G~lyckEcIle~ll 72 (304)
.+-....|.||+..+.|||+++.||.||+.||..||.
T Consensus 25 ~~p~~~~CpI~~~~m~dPV~~~cGhtf~r~~I~~~l~ 61 (100)
T 2kre_A 25 DAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLL 61 (100)
T ss_dssp SCSTTTBCTTTCSBCSSEEEETTTEEEEHHHHHHHTT
T ss_pred cCcHhhCCcCccCcccCCeECCCCCEEchHHHHHHHH
Confidence 3455789999999999999999999999999999874
No 53
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=98.65 E-value=2.4e-08 Score=78.32 Aligned_cols=36 Identities=14% Similarity=-0.033 Sum_probs=32.5
Q ss_pred cCCCcceecccCCCCCceecCCC-ceeehhhHHHHHH
Q 022029 37 IKPFDACCLCLKPFIDPLCCQKG-HIYCKECILECLL 72 (304)
Q Consensus 37 ~~~F~~C~LcL~p~~dPV~t~~G-~lyckEcIle~ll 72 (304)
+-....|.||+..+.|||+++.| |.||+.||..||.
T Consensus 19 ~p~~~~CpI~~~~m~dPV~~~cG~htf~r~cI~~~l~ 55 (98)
T 1wgm_A 19 ACDEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLL 55 (98)
T ss_dssp CCTTTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHTT
T ss_pred CcHhcCCcCccccccCCeECCCCCeEECHHHHHHHHH
Confidence 34577899999999999999999 9999999999874
No 54
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.63 E-value=3.9e-09 Score=84.85 Aligned_cols=51 Identities=31% Similarity=0.759 Sum_probs=43.1
Q ss_pred CceeccCccccccCCcceEEEccCCccchHHHHHHHhhcCCCCCCCCCCCCCCCce
Q 022029 210 KSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKERNLV 265 (304)
Q Consensus 210 ~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~~~~CPvC~~~f~~~diI 265 (304)
..+.||||.+.|.++ |.+.+|||+||..||..|+. ..||+|+.++...+++
T Consensus 21 ~~~~C~IC~~~~~~p---v~~~~CgH~fC~~Ci~~~~~--~~CP~Cr~~~~~~~~~ 71 (117)
T 1jm7_B 21 KLLRCSRCTNILREP---VCLGGCEHIFCSNCVSDCIG--TGCPVCYTPAWIQDLK 71 (117)
T ss_dssp HTTSCSSSCSCCSSC---BCCCSSSCCBCTTTGGGGTT--TBCSSSCCBCSCSSCC
T ss_pred hCCCCCCCChHhhCc---cEeCCCCCHHHHHHHHHHhc--CCCcCCCCcCcccccc
Confidence 468999999999998 23449999999999999875 7899999999766554
No 55
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=98.62 E-value=1.5e-08 Score=86.34 Aligned_cols=54 Identities=31% Similarity=0.646 Sum_probs=46.0
Q ss_pred CCceeccCccccccCCcceEEEccCCccchHHHHHHHhhc-CCCCCCCCCCCCCCCceE
Q 022029 209 DKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAV-DKVCLVCNKPCKERNLVN 266 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~-~~~CPvC~~~f~~~diI~ 266 (304)
+..+.||||...|.++ +..+|||+||..||.+|+.. ...||+|+.++...+++.
T Consensus 16 ~~~~~C~IC~~~~~~p----v~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~ 70 (170)
T 3hcs_A 16 ESKYECPICLMALREA----VQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFP 70 (170)
T ss_dssp CGGGBCTTTCSBCSSE----EECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCGGGCEE
T ss_pred CCCCCCCCCChhhcCc----EECCCCCHHHHHHHHHHHHhCCCCCCCCccCcchhhhhh
Confidence 4579999999999998 34699999999999999864 459999999998876654
No 56
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=98.61 E-value=1.7e-08 Score=72.66 Aligned_cols=55 Identities=20% Similarity=0.440 Sum_probs=45.2
Q ss_pred CceeccCccccccCCcceEEEccCCcc-chHHHHHHHhhcCCCCCCCCCCCCCCCceEec
Q 022029 210 KSFICPSCKVTLTNTLSLVALSSCGHV-FCKKCADKFMAVDKVCLVCNKPCKERNLVNVE 268 (304)
Q Consensus 210 ~~~~CPIc~k~~~~~~~~v~l~~CGhV-fc~~Ci~~~~k~~~~CPvC~~~f~~~diI~L~ 268 (304)
....|+||++.+.+.. +++.||||+ ||+.|+..+......||+|+.++. ++|.|.
T Consensus 6 ~~~~C~IC~~~~~~~~--~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~--~~i~i~ 61 (63)
T 2vje_B 6 LLKPCSLCEKRPRDGN--IIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQ--LVIKVF 61 (63)
T ss_dssp GGSBCTTTSSSBSCEE--EEETTEEEEEECHHHHHHHHHTTCBCTTTCCBCC--EEEEEE
T ss_pred cCCCCcccCCcCCCeE--EEecCCCCHhHHHHHHHHHHHhCCcCCCcCchhh--ceEEEe
Confidence 4578999999988762 345699998 999999999877789999999986 466654
No 57
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.60 E-value=1.3e-08 Score=76.88 Aligned_cols=50 Identities=20% Similarity=0.578 Sum_probs=39.2
Q ss_pred eccCccccccC-----------CcceEEEccCCccchHHHHHHHhhcCCCCCCCCCCCCCC
Q 022029 213 ICPSCKVTLTN-----------TLSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKER 262 (304)
Q Consensus 213 ~CPIc~k~~~~-----------~~~~v~l~~CGhVfc~~Ci~~~~k~~~~CPvC~~~f~~~ 262 (304)
.|+||+..|.+ ...++++.+|||+|+..||.+|+.....||+|+.++...
T Consensus 17 ~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~CR~~~~~~ 77 (81)
T 2ecl_A 17 TCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQDWVVQ 77 (81)
T ss_dssp CBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTTCCBCTTTCCBCCEE
T ss_pred CCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHHhCCCCCCcCCCcchh
Confidence 46666666643 334566668999999999999998888999999998643
No 58
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=98.60 E-value=2.6e-08 Score=71.97 Aligned_cols=55 Identities=27% Similarity=0.492 Sum_probs=44.4
Q ss_pred CceeccCccccccCCcceEEEccCCcc-chHHHHHHHhhcCCCCCCCCCCCCCCCceEec
Q 022029 210 KSFICPSCKVTLTNTLSLVALSSCGHV-FCKKCADKFMAVDKVCLVCNKPCKERNLVNVE 268 (304)
Q Consensus 210 ~~~~CPIc~k~~~~~~~~v~l~~CGhV-fc~~Ci~~~~k~~~~CPvC~~~f~~~diI~L~ 268 (304)
....|+||++.+.+.. ++..+|||+ ||..|+..+......||+|+.++. ++|.|.
T Consensus 7 ~~~~C~IC~~~~~~~~--~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~--~~i~i~ 62 (64)
T 2vje_A 7 AIEPCVICQGRPKNGC--IVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQ--MIVLTY 62 (64)
T ss_dssp GGSCCTTTSSSCSCEE--EEETTEEEEEECHHHHHHHHHTTCCCTTTCCCCC--EEEEEE
T ss_pred CcCCCCcCCCCCCCEE--EECCCCCChhhHHHHHHHHHHcCCcCCCcCcchh--ceEeee
Confidence 3568999999988861 223499999 899999999887889999999986 566664
No 59
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=98.59 E-value=9.2e-09 Score=82.19 Aligned_cols=48 Identities=21% Similarity=0.519 Sum_probs=41.2
Q ss_pred CCceeccCccccccCCcceEEEccCCccchHHHHHHHhhc-CCCCCCCCCCCC
Q 022029 209 DKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAV-DKVCLVCNKPCK 260 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~-~~~CPvC~~~f~ 260 (304)
...+.||||.+.|.++ +..+|||+||..||..|+.. ...||+|+..+.
T Consensus 13 ~~~~~C~iC~~~~~~p----~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~ 61 (115)
T 3l11_A 13 LSECQCGICMEILVEP----VTLPCNHTLCKPCFQSTVEKASLCCPFCRRRVS 61 (115)
T ss_dssp HHHHBCTTTCSBCSSC----EECTTSCEECHHHHCCCCCTTTSBCTTTCCBCH
T ss_pred CCCCCCccCCcccCce----eEcCCCCHHhHHHHHHHHhHCcCCCCCCCcccC
Confidence 3468999999999987 34499999999999998764 678999999986
No 60
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=98.58 E-value=1.8e-08 Score=92.12 Aligned_cols=55 Identities=18% Similarity=0.442 Sum_probs=47.4
Q ss_pred CCceeccCccccccCCcceEEEccCCccchHHHHHHHhhc--CCCCCC--CCCCCCCCCceE
Q 022029 209 DKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAV--DKVCLV--CNKPCKERNLVN 266 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~--~~~CPv--C~~~f~~~diI~ 266 (304)
...+.||||+..|.++ |.+..|||+||..||..++.. ...||+ |++.+...|+++
T Consensus 179 ~~el~CPIcl~~f~DP---Vts~~CGHsFcR~cI~~~~~~~~~~~CPvtGCr~~l~~~dL~p 237 (267)
T 3htk_C 179 KIELTCPITCKPYEAP---LISRKCNHVFDRDGIQNYLQGYTTRDCPQAACSQVVSMRDFVR 237 (267)
T ss_dssp BCCSBCTTTSSBCSSE---EEESSSCCEEEHHHHHHHSTTCSCEECSGGGCSCEECGGGEEE
T ss_pred ceeeECcCccCcccCC---eeeCCCCCcccHHHHHHHHHhCCCCCCCcccccCcCchhhCCc
Confidence 4579999999999999 345799999999999999864 358999 999999888765
No 61
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=98.56 E-value=2.1e-08 Score=96.51 Aligned_cols=56 Identities=20% Similarity=0.537 Sum_probs=48.1
Q ss_pred CceeccCccccccCCcceEEEccCCccchHHHHHHHhh-cCCCCCCCCCCCCCCCceEecC
Q 022029 210 KSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMA-VDKVCLVCNKPCKERNLVNVEK 269 (304)
Q Consensus 210 ~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k-~~~~CPvC~~~f~~~diI~L~~ 269 (304)
....|+||.+.+.++ ++.+|||+||..|+..|+. ....||+|+.++...++|.+.+
T Consensus 331 ~~~~C~ICle~~~~p----v~lpCGH~FC~~Ci~~wl~~~~~~CP~CR~~i~~~~~i~v~p 387 (389)
T 2y1n_A 331 TFQLCKICAENDKDV----KIEPCGHLMCTSCLTSWQESEGQGCPFCRCEIKGTEPIVVDP 387 (389)
T ss_dssp SSSBCTTTSSSBCCE----EEETTCCEECHHHHHHHHHHTCSBCTTTCCBCCEEEECSCCT
T ss_pred CCCCCCccCcCCCCe----EEeCCCChhhHHHHHHHHhcCCCCCCCCCCccCCceeEecCC
Confidence 347999999999876 5789999999999999987 6789999999999877776654
No 62
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=98.53 E-value=1.2e-08 Score=85.12 Aligned_cols=49 Identities=20% Similarity=0.672 Sum_probs=41.9
Q ss_pred CCceeccCccccccCCcceEEEccCCccchHHHHHHHhhcC-CCCCCCCCCCCC
Q 022029 209 DKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVD-KVCLVCNKPCKE 261 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~~-~~CPvC~~~f~~ 261 (304)
+..+.||||...|.++ +..+|||+||..||.+|+... ..||+|+.++..
T Consensus 29 ~~~~~C~IC~~~~~~p----v~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~~ 78 (141)
T 3knv_A 29 EAKYLCSACRNVLRRP----FQAQCGHRYCSFCLASILSSGPQNCAACVHEGIY 78 (141)
T ss_dssp CGGGBCTTTCSBCSSE----EECTTSCEEEHHHHHHHGGGSCEECHHHHHTTCC
T ss_pred CcCcCCCCCChhhcCc----EECCCCCccCHHHHHHHHhcCCCCCCCCCCcccc
Confidence 4679999999999998 356999999999999998744 489999997643
No 63
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=98.51 E-value=9e-08 Score=83.05 Aligned_cols=38 Identities=18% Similarity=0.217 Sum_probs=34.7
Q ss_pred CCcCCCcceecccCCCCCceecCCCceeehhhHHHHHH
Q 022029 35 DSIKPFDACCLCLKPFIDPLCCQKGHIYCKECILECLL 72 (304)
Q Consensus 35 ds~~~F~~C~LcL~p~~dPV~t~~G~lyckEcIle~ll 72 (304)
..+-++..|.||+..+.|||+++.||.||+.||..||.
T Consensus 101 ~~ip~~f~CPI~~elm~DPV~~~~Ghtfer~~I~~~l~ 138 (179)
T 2f42_A 101 REIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQ 138 (179)
T ss_dssp CCCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHH
T ss_pred cCCcHhhcccCccccCCCCeECCCCCEECHHHHHHHHH
Confidence 44567889999999999999999999999999999985
No 64
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=98.50 E-value=1.4e-07 Score=69.92 Aligned_cols=39 Identities=21% Similarity=0.378 Sum_probs=34.8
Q ss_pred CCCcCCCcceecccCCCCCceecCCCceeehhhHHHHHH
Q 022029 34 KDSIKPFDACCLCLKPFIDPLCCQKGHIYCKECILECLL 72 (304)
Q Consensus 34 ~ds~~~F~~C~LcL~p~~dPV~t~~G~lyckEcIle~ll 72 (304)
.+.+.....|.||+..+.+||+++.||.||+.||.+||.
T Consensus 2 ~~~~~~~~~C~IC~~~~~~Pv~~~CgH~fc~~Ci~~~~~ 40 (78)
T 1t1h_A 2 SPEFPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLD 40 (78)
T ss_dssp CCCCSSSSSCTTTSCCCSSEEEETTTEEEEHHHHHHHHT
T ss_pred CcCCcccCCCCCccccccCCEEcCCCCeecHHHHHHHHH
Confidence 455667789999999999999999999999999999873
No 65
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.49 E-value=2e-08 Score=70.50 Aligned_cols=46 Identities=22% Similarity=0.574 Sum_probs=38.7
Q ss_pred CCceeccCccccccCCcceEEEccCCccchHHHHHHHhhcCCCCCCCCCCCCC
Q 022029 209 DKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKE 261 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~~~~CPvC~~~f~~ 261 (304)
...+.|+||.+.|.++ ++.+|||+||..|+.. ....||+|+..+..
T Consensus 4 ~~~~~C~IC~~~~~~p----~~l~CgH~fC~~Ci~~---~~~~CP~Cr~~~~~ 49 (56)
T 1bor_A 4 FQFLRCQQCQAEAKCP----KLLPCLHTLCSGCLEA---SGMQCPICQAPWPL 49 (56)
T ss_dssp CCCSSCSSSCSSCBCC----SCSTTSCCSBTTTCSS---SSSSCSSCCSSSSC
T ss_pred ccCCCceEeCCccCCe----EEcCCCCcccHHHHcc---CCCCCCcCCcEeec
Confidence 4568899999999997 3568999999999877 35689999998863
No 66
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.49 E-value=1.2e-07 Score=69.40 Aligned_cols=55 Identities=25% Similarity=0.581 Sum_probs=44.8
Q ss_pred CCceeccCccccccCCcceEEEccCCcc-chHHHHHHHhhcCCCCCCCCCCCCCCCceEecCCCcc
Q 022029 209 DKSFICPSCKVTLTNTLSLVALSSCGHV-FCKKCADKFMAVDKVCLVCNKPCKERNLVNVEKGGTG 273 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~v~l~~CGhV-fc~~Ci~~~~k~~~~CPvC~~~f~~~diI~L~~~gtg 273 (304)
.....|+||++.+.+. ++.||||+ ||..|+..+ ..||+|+.++.. +|.|..+..|
T Consensus 13 ~~~~~C~IC~~~~~~~----v~~pCgH~~~C~~C~~~~----~~CP~CR~~i~~--~~~i~~~~sg 68 (68)
T 2ea5_A 13 ENSKDCVVCQNGTVNW----VLLPCRHTCLCDGCVKYF----QQCPMCRQFVQE--SFALSGPSSG 68 (68)
T ss_dssp CCSSCCSSSSSSCCCC----EETTTTBCCSCTTHHHHC----SSCTTTCCCCCC--EECCCSSCCC
T ss_pred CCCCCCCCcCcCCCCE----EEECCCChhhhHHHHhcC----CCCCCCCcchhc--eEEeecCCCC
Confidence 3467999999998875 68899999 999999863 689999999874 7777665443
No 67
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.42 E-value=8.8e-08 Score=70.99 Aligned_cols=44 Identities=25% Similarity=0.631 Sum_probs=37.9
Q ss_pred CceeccCccccccCCcceEEEccCCcc-chHHHHHHHhhcCCCCCCCCCCCCC
Q 022029 210 KSFICPSCKVTLTNTLSLVALSSCGHV-FCKKCADKFMAVDKVCLVCNKPCKE 261 (304)
Q Consensus 210 ~~~~CPIc~k~~~~~~~~v~l~~CGhV-fc~~Ci~~~~k~~~~CPvC~~~f~~ 261 (304)
..+.|+||++.+.++ ++.+|||+ ||..|+..+ ..||+|+.++..
T Consensus 24 ~~~~C~IC~~~~~~~----~~~pCgH~~~C~~C~~~~----~~CP~Cr~~i~~ 68 (75)
T 2ecg_A 24 EEKLCKICMDRNIAI----VFVPCGHLVTCKQCAEAV----DKCPMCYTVITF 68 (75)
T ss_dssp HHHSCSSSCSSCCCB----CCSSSCCCCBCHHHHHHC----SBCTTTCCBCCC
T ss_pred CCCCCCcCCCCCCCE----EEecCCCHHHHHHHhhCC----CCCccCCceecC
Confidence 357899999999887 46799999 999999763 689999999975
No 68
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.40 E-value=1.8e-07 Score=84.54 Aligned_cols=37 Identities=19% Similarity=0.228 Sum_probs=33.7
Q ss_pred CcCCCcceecccCCCCCceecCCCceeehhhHHHHHH
Q 022029 36 SIKPFDACCLCLKPFIDPLCCQKGHIYCKECILECLL 72 (304)
Q Consensus 36 s~~~F~~C~LcL~p~~dPV~t~~G~lyckEcIle~ll 72 (304)
.+-++..|.||+..+.|||+++.||.||+.||..||.
T Consensus 204 ~~~~~~~c~i~~~~~~dPv~~~~gh~f~~~~i~~~~~ 240 (281)
T 2c2l_A 204 DIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQ 240 (281)
T ss_dssp CCCSTTBCTTTCSBCSSEEECSSCCEEETTHHHHHHH
T ss_pred CCCcccCCcCcCCHhcCCeECCCCCEECHHHHHHHHH
Confidence 3456889999999999999999999999999999985
No 69
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=98.36 E-value=1.2e-07 Score=70.25 Aligned_cols=44 Identities=25% Similarity=0.631 Sum_probs=38.1
Q ss_pred CceeccCccccccCCcceEEEccCCcc-chHHHHHHHhhcCCCCCCCCCCCCC
Q 022029 210 KSFICPSCKVTLTNTLSLVALSSCGHV-FCKKCADKFMAVDKVCLVCNKPCKE 261 (304)
Q Consensus 210 ~~~~CPIc~k~~~~~~~~v~l~~CGhV-fc~~Ci~~~~k~~~~CPvC~~~f~~ 261 (304)
....|+||++.+.++ ++.+|||+ ||..|+..+ ..||+|+.++..
T Consensus 23 ~~~~C~iC~~~~~~~----~~~pCgH~~~C~~C~~~~----~~CP~Cr~~i~~ 67 (74)
T 4ic3_A 23 EEKLCKICMDRNIAI----VFVPCGHLVTCKQCAEAV----DKCPMCYTVITF 67 (74)
T ss_dssp HHTBCTTTSSSBCCE----EEETTCCBCCCHHHHTTC----SBCTTTCCBCSE
T ss_pred cCCCCCCCCCCCCCE----EEcCCCChhHHHHhhhcC----ccCCCcCcCccC
Confidence 357899999999886 45699999 999999886 689999999874
No 70
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.36 E-value=1.1e-07 Score=73.33 Aligned_cols=58 Identities=19% Similarity=0.496 Sum_probs=44.3
Q ss_pred CCceeccCccccccCCcceEEEccCCccchHHHHHHHhhc--------CCCCCC--CCCC--CCCCCceEe
Q 022029 209 DKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAV--------DKVCLV--CNKP--CKERNLVNV 267 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~--------~~~CPv--C~~~--f~~~diI~L 267 (304)
...+.||||.+.+..+ .++.+.+|||.||..|+..++.. ...||. |+.. +...+|..|
T Consensus 3 ~~~~~C~IC~~~~~~~-~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~~~~~~~~i~~l 72 (94)
T 1wim_A 3 SGSSGCKLCLGEYPVE-QMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQGHLQENEIECM 72 (94)
T ss_dssp CSBCCCSSSCCCCBGG-GEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSCCEECHHHHHHH
T ss_pred CCCcCCcccCcccccc-cceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCCCccCHHHHHHH
Confidence 3568999999999876 33445689999999999999752 248999 9998 665554443
No 71
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=98.28 E-value=5.9e-07 Score=71.45 Aligned_cols=49 Identities=22% Similarity=0.537 Sum_probs=41.1
Q ss_pred eeccCccccccCCc--------------ceEEEccCCccchHHHHHHHhhcCCCCCCCCCCCC
Q 022029 212 FICPSCKVTLTNTL--------------SLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCK 260 (304)
Q Consensus 212 ~~CPIc~k~~~~~~--------------~~v~l~~CGhVfc~~Ci~~~~k~~~~CPvC~~~f~ 260 (304)
-.|+||+..|.+.. -.+++.+|||+|+..||..|+.....||+|+.+|.
T Consensus 38 d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~Cr~~~~ 100 (106)
T 3dpl_R 38 DNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWE 100 (106)
T ss_dssp CCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTTCSBCSSSCSBCC
T ss_pred CCCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHHcCCcCcCCCCcce
Confidence 47999999987641 13566799999999999999988889999999875
No 72
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=98.10 E-value=8.9e-07 Score=66.50 Aligned_cols=48 Identities=27% Similarity=0.739 Sum_probs=39.9
Q ss_pred ceeccCccccccCCcceEEEccCCcc-chHHHHHHHhhcCCCCCCCCCCCCCCCceEec
Q 022029 211 SFICPSCKVTLTNTLSLVALSSCGHV-FCKKCADKFMAVDKVCLVCNKPCKERNLVNVE 268 (304)
Q Consensus 211 ~~~CPIc~k~~~~~~~~v~l~~CGhV-fc~~Ci~~~~k~~~~CPvC~~~f~~~diI~L~ 268 (304)
...|+||++.+.+. ++.||||+ ||..|+..+ ..||+|+.++.. ++.+.
T Consensus 18 ~~~C~IC~~~~~~~----v~~pCgH~~~C~~C~~~~----~~CP~Cr~~i~~--~~~i~ 66 (79)
T 2yho_A 18 AMLCMVCCEEEINS----TFCPCGHTVCCESCAAQL----QSCPVCRSRVEH--VQHVY 66 (79)
T ss_dssp HTBCTTTSSSBCCE----EEETTCBCCBCHHHHTTC----SBCTTTCCBCCE--EEECB
T ss_pred CCEeEEeCcccCcE----EEECCCCHHHHHHHHHhc----CcCCCCCchhhC--eEEEE
Confidence 46899999998875 56799999 999999875 489999999985 55554
No 73
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=98.03 E-value=6.3e-07 Score=72.58 Aligned_cols=50 Identities=22% Similarity=0.500 Sum_probs=0.0
Q ss_pred eeccCccccccCCc--------------ceEEEccCCccchHHHHHHHhhcCCCCCCCCCCCCC
Q 022029 212 FICPSCKVTLTNTL--------------SLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKE 261 (304)
Q Consensus 212 ~~CPIc~k~~~~~~--------------~~v~l~~CGhVfc~~Ci~~~~k~~~~CPvC~~~f~~ 261 (304)
-.|+||+..|.+.. -.+++.+|||+|+..||..|+.....||+|+.+|..
T Consensus 49 d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~~~~CP~Cr~~~~~ 112 (117)
T 4a0k_B 49 DNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEF 112 (117)
T ss_dssp ----------------------------------------------------------------
T ss_pred CcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHcCCcCCCCCCeeee
Confidence 47999999987631 123445899999999999999888899999998753
No 74
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=97.98 E-value=2.3e-06 Score=72.74 Aligned_cols=37 Identities=24% Similarity=0.658 Sum_probs=33.5
Q ss_pred CcCCCcceecccCCCCCceecCCCceeehhhHHHHHH
Q 022029 36 SIKPFDACCLCLKPFIDPLCCQKGHIYCKECILECLL 72 (304)
Q Consensus 36 s~~~F~~C~LcL~p~~dPV~t~~G~lyckEcIle~ll 72 (304)
.+.....|.+|+.++.+||.++-||+||+.||..+|.
T Consensus 14 ~~~~~~~C~IC~~~~~~pv~~~CgH~fC~~Ci~~~~~ 50 (170)
T 3hcs_A 14 PLESKYECPICLMALREAVQTPCGHRFCKACIIKSIR 50 (170)
T ss_dssp CCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHH
T ss_pred CCCCCCCCCCCChhhcCcEECCCCCHHHHHHHHHHHH
Confidence 4556678999999999999999999999999999885
No 75
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.95 E-value=1.6e-05 Score=57.81 Aligned_cols=38 Identities=26% Similarity=0.678 Sum_probs=33.2
Q ss_pred CCcCCCcceecccCCCCCceec-CCCceeehhhHHHHHH
Q 022029 35 DSIKPFDACCLCLKPFIDPLCC-QKGHIYCKECILECLL 72 (304)
Q Consensus 35 ds~~~F~~C~LcL~p~~dPV~t-~~G~lyckEcIle~ll 72 (304)
+.+.....|.+|+..+.+||.. +-||+||++||..||.
T Consensus 10 ~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~ 48 (72)
T 2djb_A 10 SELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFY 48 (72)
T ss_dssp CCCCGGGSCTTTSSCCSSCEECSSSCCEECHHHHHHHHH
T ss_pred hhcCCCCCCCCCChHHHCcCEECCCCCHHHHHHHHHHHH
Confidence 3456678899999999999975 8999999999999984
No 76
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=97.90 E-value=1.1e-05 Score=59.16 Aligned_cols=41 Identities=32% Similarity=0.598 Sum_probs=35.5
Q ss_pred CCCCcCCCcceecccCCCCCceecC-CCceeehhhHHHHHHH
Q 022029 33 GKDSIKPFDACCLCLKPFIDPLCCQ-KGHIYCKECILECLLS 73 (304)
Q Consensus 33 g~ds~~~F~~C~LcL~p~~dPV~t~-~G~lyckEcIle~ll~ 73 (304)
..+.+.....|.+|+..+.+||.++ -||.||++||..||..
T Consensus 8 ~~~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~ 49 (74)
T 2yur_A 8 EDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLE 49 (74)
T ss_dssp CCCCSCGGGSCSSSCCCCTTCEECSSSCCEECTTHHHHHHHH
T ss_pred ccccCCCCCCCcCCChHHhCCeEcCCCCCHHHHHHHHHHHHh
Confidence 3345566788999999999999999 7999999999999864
No 77
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.89 E-value=1.2e-05 Score=57.56 Aligned_cols=35 Identities=23% Similarity=0.530 Sum_probs=31.7
Q ss_pred cCCCcceecccCCCCCceecCCCceeehhhHHHHH
Q 022029 37 IKPFDACCLCLKPFIDPLCCQKGHIYCKECILECL 71 (304)
Q Consensus 37 ~~~F~~C~LcL~p~~dPV~t~~G~lyckEcIle~l 71 (304)
+..-..|.+|+..+.+||.++-||+||++||..+|
T Consensus 12 ~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~ 46 (66)
T 2ecy_A 12 VEDKYKCEKCHLVLCSPKQTECGHRFCESCMAALL 46 (66)
T ss_dssp CCCCEECTTTCCEESSCCCCSSSCCCCHHHHHHHH
T ss_pred CCcCCCCCCCChHhcCeeECCCCCHHHHHHHHHHH
Confidence 34557899999999999999999999999999987
No 78
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.86 E-value=1e-05 Score=55.95 Aligned_cols=38 Identities=26% Similarity=0.688 Sum_probs=33.7
Q ss_pred CCcCCCcceecccCCCCCceecCCCceeehhhHHHHHH
Q 022029 35 DSIKPFDACCLCLKPFIDPLCCQKGHIYCKECILECLL 72 (304)
Q Consensus 35 ds~~~F~~C~LcL~p~~dPV~t~~G~lyckEcIle~ll 72 (304)
+.+.....|.+|+..+.+||.++-||+||++||..|+.
T Consensus 10 ~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~ 47 (58)
T 2ecj_A 10 ENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWE 47 (58)
T ss_dssp SCSCCCCBCSSSCCBCSSCCCCSSCCCCCHHHHHHHTT
T ss_pred hccccCCCCccCCcccCccEeCCCCCccCHHHHHHHHH
Confidence 34556788999999999999999999999999999964
No 79
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=97.86 E-value=3e-06 Score=77.42 Aligned_cols=35 Identities=26% Similarity=0.399 Sum_probs=30.6
Q ss_pred cCCCcceecccCCCCCceec-CCCceeehhhHHHHH
Q 022029 37 IKPFDACCLCLKPFIDPLCC-QKGHIYCKECILECL 71 (304)
Q Consensus 37 ~~~F~~C~LcL~p~~dPV~t-~~G~lyckEcIle~l 71 (304)
...--.|.||+.+++|||.+ ..||.|||+||..|+
T Consensus 178 ~~~el~CPIcl~~f~DPVts~~CGHsFcR~cI~~~~ 213 (267)
T 3htk_C 178 GKIELTCPITCKPYEAPLISRKCNHVFDRDGIQNYL 213 (267)
T ss_dssp SBCCSBCTTTSSBCSSEEEESSSCCEEEHHHHHHHS
T ss_pred CceeeECcCccCcccCCeeeCCCCCcccHHHHHHHH
Confidence 45556799999999999974 889999999999986
No 80
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=97.85 E-value=1.2e-05 Score=62.52 Aligned_cols=37 Identities=22% Similarity=0.451 Sum_probs=32.7
Q ss_pred cCCCcceecccCCCCCcee-cCCCceeehhhHHHHHHH
Q 022029 37 IKPFDACCLCLKPFIDPLC-CQKGHIYCKECILECLLS 73 (304)
Q Consensus 37 ~~~F~~C~LcL~p~~dPV~-t~~G~lyckEcIle~ll~ 73 (304)
+.....|.+|+..+.+||. ++-||+||+.||..||..
T Consensus 19 l~~~~~C~IC~~~~~~p~~~~~CgH~FC~~Ci~~~~~~ 56 (100)
T 3lrq_A 19 IAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTE 56 (100)
T ss_dssp HHHHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHHH
T ss_pred CCCCCCCccCCccccCccccCCCCChhhHHHHHHHHHH
Confidence 4456789999999999998 889999999999999853
No 81
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=97.84 E-value=1.4e-05 Score=57.65 Aligned_cols=33 Identities=21% Similarity=0.757 Sum_probs=29.8
Q ss_pred CcceecccCCCCCc-------eecCCCceeehhhHHHHHH
Q 022029 40 FDACCLCLKPFIDP-------LCCQKGHIYCKECILECLL 72 (304)
Q Consensus 40 F~~C~LcL~p~~dP-------V~t~~G~lyckEcIle~ll 72 (304)
-..|.+|+..+.+| +.++-||+||++||.+||.
T Consensus 10 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~ 49 (71)
T 3ng2_A 10 TVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLK 49 (71)
T ss_dssp CCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHH
T ss_pred CCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHH
Confidence 36799999999988 8899999999999999974
No 82
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.82 E-value=2.1e-05 Score=55.53 Aligned_cols=38 Identities=24% Similarity=0.544 Sum_probs=33.9
Q ss_pred CcCCCcceecccCCCCCceecCCCceeehhhHHHHHHH
Q 022029 36 SIKPFDACCLCLKPFIDPLCCQKGHIYCKECILECLLS 73 (304)
Q Consensus 36 s~~~F~~C~LcL~p~~dPV~t~~G~lyckEcIle~ll~ 73 (304)
.+.....|.+|+..+.+||.++-||+||++||..||..
T Consensus 16 ~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~ 53 (63)
T 2ysj_A 16 KLQEEVICPICLDILQKPVTIDCGHNFCLKCITQIGET 53 (63)
T ss_dssp CCCCCCBCTTTCSBCSSCEECTTSSEECHHHHHHHHHH
T ss_pred hCccCCCCCcCCchhCCeEEeCCCCcchHHHHHHHHHc
Confidence 44556789999999999999999999999999999863
No 83
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=97.79 E-value=3.6e-06 Score=79.94 Aligned_cols=48 Identities=25% Similarity=0.654 Sum_probs=40.0
Q ss_pred CceeccCccccccCCcceEEEccCCcc-chHHHHHHHhhcCCCCCCCCCCCCCCCceEe
Q 022029 210 KSFICPSCKVTLTNTLSLVALSSCGHV-FCKKCADKFMAVDKVCLVCNKPCKERNLVNV 267 (304)
Q Consensus 210 ~~~~CPIc~k~~~~~~~~v~l~~CGhV-fc~~Ci~~~~k~~~~CPvC~~~f~~~diI~L 267 (304)
....|+||++.+.++ ++.+|||+ ||..|+..+ ..||+|+.++.. +|.|
T Consensus 294 ~~~~C~IC~~~~~~~----v~lpCgH~~fC~~C~~~~----~~CP~CR~~i~~--~~~i 342 (345)
T 3t6p_A 294 EERTCKVCMDKEVSV----VFIPCGHLVVCQECAPSL----RKCPICRGIIKG--TVRT 342 (345)
T ss_dssp TTCBCTTTSSSBCCE----EEETTCCEEECTTTGGGC----SBCTTTCCBCCE--EEEC
T ss_pred CCCCCCccCCcCCce----EEcCCCChhHhHHHHhcC----CcCCCCCCCccC--eEEe
Confidence 458999999999886 45699999 999999876 689999999974 4443
No 84
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.75 E-value=3e-05 Score=57.65 Aligned_cols=36 Identities=25% Similarity=0.608 Sum_probs=32.2
Q ss_pred cCCCcceecccCCCCCceecCCCceeehhhHHHHHH
Q 022029 37 IKPFDACCLCLKPFIDPLCCQKGHIYCKECILECLL 72 (304)
Q Consensus 37 ~~~F~~C~LcL~p~~dPV~t~~G~lyckEcIle~ll 72 (304)
......|.+|+..+.+||+++-||+||++||..+|.
T Consensus 12 ~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~ 47 (81)
T 2csy_A 12 EEIPFRCFICRQAFQNPVVTKCRHYFCESCALEHFR 47 (81)
T ss_dssp CCCCSBCSSSCSBCCSEEECTTSCEEEHHHHHHHHH
T ss_pred CCCCCCCcCCCchhcCeeEccCCCHhHHHHHHHHHH
Confidence 344568999999999999999999999999999984
No 85
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.75 E-value=2.2e-05 Score=59.09 Aligned_cols=53 Identities=15% Similarity=0.460 Sum_probs=42.1
Q ss_pred CCceeccCccccccCCcceEEEccCC-----ccchHHHHHHHhhc--CCCCCCCCCCCCCCC
Q 022029 209 DKSFICPSCKVTLTNTLSLVALSSCG-----HVFCKKCADKFMAV--DKVCLVCNKPCKERN 263 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~v~l~~CG-----hVfc~~Ci~~~~k~--~~~CPvC~~~f~~~d 263 (304)
.....|+||+..|..... ++.||+ |.|...||++|+.. ...||+|+..|....
T Consensus 13 ~~~~~C~IC~~~~~~~~~--l~~pC~C~Gs~h~fH~~Cl~~Wl~~~~~~~CplCr~~~~~~~ 72 (80)
T 2d8s_A 13 SSQDICRICHCEGDDESP--LITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEFIMET 72 (80)
T ss_dssp TTSCCCSSSCCCCCSSSC--EECSSSCCSSSCCEETTHHHHHHHHHCCSBCSSSCCBCCCCC
T ss_pred CCCCCCeEcCccccCCCe--eEeccccCCcCCeeCHHHHHHHHhhCCCCCCCCCCCeeecCc
Confidence 345789999999876544 357996 99999999999864 369999999997543
No 86
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.74 E-value=7.5e-05 Score=55.22 Aligned_cols=38 Identities=26% Similarity=0.640 Sum_probs=33.8
Q ss_pred CcCCCcceecccCCCCCceecCCCceeehhhHHHHHHH
Q 022029 36 SIKPFDACCLCLKPFIDPLCCQKGHIYCKECILECLLS 73 (304)
Q Consensus 36 s~~~F~~C~LcL~p~~dPV~t~~G~lyckEcIle~ll~ 73 (304)
.+.....|.+|+..+.+||.++-||+||++||..++..
T Consensus 15 ~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~ 52 (85)
T 2ecv_A 15 NVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKK 52 (85)
T ss_dssp CCCCCCCCTTTCSCCSSCBCCSSSCCBCTTHHHHHHHH
T ss_pred HccCCCCCCCCCcccCCceeCCCCCHHHHHHHHHHHHH
Confidence 34556789999999999999999999999999998864
No 87
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.74 E-value=0.00012 Score=54.09 Aligned_cols=38 Identities=29% Similarity=0.600 Sum_probs=33.6
Q ss_pred CcCCCcceecccCCCCCceecCCCceeehhhHHHHHHH
Q 022029 36 SIKPFDACCLCLKPFIDPLCCQKGHIYCKECILECLLS 73 (304)
Q Consensus 36 s~~~F~~C~LcL~p~~dPV~t~~G~lyckEcIle~ll~ 73 (304)
.+.....|.+|+..+.+||.++-||.||++||..++..
T Consensus 15 ~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~ 52 (85)
T 2ecw_A 15 MIKEEVTCPICLELLKEPVSADCNHSFCRACITLNYES 52 (85)
T ss_dssp CCCTTTSCTTTCSCCSSCEECTTSCCBCHHHHHHHHHH
T ss_pred hCccCCCCcCCChhhCcceeCCCCCHHHHHHHHHHHHh
Confidence 34556789999999999999999999999999998854
No 88
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=97.72 E-value=2.1e-05 Score=55.30 Aligned_cols=32 Identities=22% Similarity=0.804 Sum_probs=29.1
Q ss_pred cceecccCCCCCc-------eecCCCceeehhhHHHHHH
Q 022029 41 DACCLCLKPFIDP-------LCCQKGHIYCKECILECLL 72 (304)
Q Consensus 41 ~~C~LcL~p~~dP-------V~t~~G~lyckEcIle~ll 72 (304)
..|.+|+..+.+| +.++-||+||.+||.+||.
T Consensus 4 ~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~ 42 (64)
T 2xeu_A 4 VSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLK 42 (64)
T ss_dssp CBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHH
T ss_pred CCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHH
Confidence 5799999999887 8899999999999999874
No 89
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=97.66 E-value=2.5e-05 Score=61.10 Aligned_cols=46 Identities=30% Similarity=0.696 Sum_probs=39.1
Q ss_pred eccCccccccCCcceEEEccCCccchHHHHHHHhh-cCCCCCCCCCCCCC
Q 022029 213 ICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMA-VDKVCLVCNKPCKE 261 (304)
Q Consensus 213 ~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k-~~~~CPvC~~~f~~ 261 (304)
.|++|...+.--. .+.||+||||++|+..+.+ .+..||.|+.++.+
T Consensus 3 fC~~C~~Pi~iyg---RmIPCkHvFCydCa~~~~~~~~k~Cp~C~~~V~r 49 (101)
T 3vk6_A 3 FCDKCGLPIKVYG---RMIPCKHVFCYDCAILHEKKGDKMCPGCSDPVQR 49 (101)
T ss_dssp BCTTTCSBCSEEE---EEETTCCEEEHHHHHHHHHTTCCBCTTTCCBCSE
T ss_pred ecCccCCCeEEEe---eeccccccHHHHHHHHHHhccCCCCcCcCCeeee
Confidence 6999999887653 4679999999999999864 57899999999975
No 90
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=97.64 E-value=4.8e-05 Score=60.79 Aligned_cols=37 Identities=24% Similarity=0.658 Sum_probs=33.4
Q ss_pred CcCCCcceecccCCCCCceecCCCceeehhhHHHHHH
Q 022029 36 SIKPFDACCLCLKPFIDPLCCQKGHIYCKECILECLL 72 (304)
Q Consensus 36 s~~~F~~C~LcL~p~~dPV~t~~G~lyckEcIle~ll 72 (304)
.+.....|.+|+..+.+||.++-||+||+.||..+|.
T Consensus 14 ~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~ 50 (118)
T 3hct_A 14 PLESKYECPICLMALREAVQTPCGHRFCKACIIKSIR 50 (118)
T ss_dssp CCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHH
T ss_pred CCCCCCCCCcCChhhcCeEECCcCChhhHHHHHHHHh
Confidence 4555678999999999999999999999999999885
No 91
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=97.61 E-value=2.6e-05 Score=61.16 Aligned_cols=33 Identities=33% Similarity=0.773 Sum_probs=30.6
Q ss_pred CcceecccCCCCCceecCCCceeehhhHHHHHH
Q 022029 40 FDACCLCLKPFIDPLCCQKGHIYCKECILECLL 72 (304)
Q Consensus 40 F~~C~LcL~p~~dPV~t~~G~lyckEcIle~ll 72 (304)
...|.+|+..+.+||.++-||.||++||..++.
T Consensus 21 ~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~ 53 (112)
T 1jm7_A 21 ILECPICLELIKEPVSTKCDHIFCKFCMLKLLN 53 (112)
T ss_dssp HTSCSSSCCCCSSCCBCTTSCCCCSHHHHHHHH
T ss_pred CCCCcccChhhcCeEECCCCCHHHHHHHHHHHH
Confidence 457999999999999999999999999999875
No 92
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=97.59 E-value=4.4e-05 Score=57.98 Aligned_cols=40 Identities=33% Similarity=0.617 Sum_probs=34.6
Q ss_pred CCcCCCcceecccCCCCCceecC-CCceeehhhHHHHHHHh
Q 022029 35 DSIKPFDACCLCLKPFIDPLCCQ-KGHIYCKECILECLLSQ 74 (304)
Q Consensus 35 ds~~~F~~C~LcL~p~~dPV~t~-~G~lyckEcIle~ll~q 74 (304)
+.+.....|.+|+..+.+||.++ -||.||+.||.+++..+
T Consensus 8 ~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~ 48 (92)
T 3ztg_A 8 DPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLES 48 (92)
T ss_dssp CCCCTTTEETTTTEECSSCEECTTTCCEECHHHHHHHHHHC
T ss_pred ccCCcCCCCCCCChhhcCceECCCCCCHHHHHHHHHHHHhc
Confidence 34556688999999999999999 79999999999998643
No 93
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.56 E-value=8.6e-05 Score=55.52 Aligned_cols=45 Identities=24% Similarity=0.604 Sum_probs=38.3
Q ss_pred cccCCCCcCCCcceecccCCCCC----ceecCCCceeehhhHHHHHHHh
Q 022029 30 ERLGKDSIKPFDACCLCLKPFID----PLCCQKGHIYCKECILECLLSQ 74 (304)
Q Consensus 30 ~Rlg~ds~~~F~~C~LcL~p~~d----PV~t~~G~lyckEcIle~ll~q 74 (304)
..+..+.+.....|.+|+..+.+ |+.++-||.||++||..||..+
T Consensus 5 ~~~~~~~~~~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~ 53 (88)
T 2ct2_A 5 SSGNLDALREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASS 53 (88)
T ss_dssp CCCSCCCCCSCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHC
T ss_pred CccChhhccCCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcC
Confidence 34455667778899999999999 9999999999999999998653
No 94
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.56 E-value=5e-05 Score=55.05 Aligned_cols=36 Identities=19% Similarity=0.596 Sum_probs=32.3
Q ss_pred cCCCcceecccCCCCCceecCCCceeehhhHHHHHH
Q 022029 37 IKPFDACCLCLKPFIDPLCCQKGHIYCKECILECLL 72 (304)
Q Consensus 37 ~~~F~~C~LcL~p~~dPV~t~~G~lyckEcIle~ll 72 (304)
...-..|.+|+..+.+||.++-||+||++||..||.
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~~ 47 (71)
T 2d8t_A 12 SLTVPECAICLQTCVHPVSLPCKHVFCYLCVKGASW 47 (71)
T ss_dssp SSSCCBCSSSSSBCSSEEEETTTEEEEHHHHHHCTT
T ss_pred CCCCCCCccCCcccCCCEEccCCCHHHHHHHHHHHH
Confidence 344578999999999999999999999999999885
No 95
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=97.55 E-value=7.4e-05 Score=62.55 Aligned_cols=34 Identities=21% Similarity=0.448 Sum_probs=31.2
Q ss_pred CCcceecccCCCCCceecCCCceeehhhHHHHHH
Q 022029 39 PFDACCLCLKPFIDPLCCQKGHIYCKECILECLL 72 (304)
Q Consensus 39 ~F~~C~LcL~p~~dPV~t~~G~lyckEcIle~ll 72 (304)
....|.+|+..+.+||.++.||.||+.||..+|-
T Consensus 77 ~~~~C~IC~~~~~~pv~~~CgH~fC~~Ci~~~~~ 110 (150)
T 1z6u_A 77 QSFMCVCCQELVYQPVTTECFHNVCKDCLQRSFK 110 (150)
T ss_dssp HHTBCTTTSSBCSSEEECTTSCEEEHHHHHHHHH
T ss_pred cCCEeecCChhhcCCEEcCCCCchhHHHHHHHHH
Confidence 4468999999999999999999999999999884
No 96
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=97.52 E-value=7.5e-05 Score=53.05 Aligned_cols=32 Identities=22% Similarity=0.633 Sum_probs=27.9
Q ss_pred cceecccC-CCCCc----eecCCCceeehhhHHHHHH
Q 022029 41 DACCLCLK-PFIDP----LCCQKGHIYCKECILECLL 72 (304)
Q Consensus 41 ~~C~LcL~-p~~dP----V~t~~G~lyckEcIle~ll 72 (304)
..|.+|+. .+.+| |+++-||+||++||.+++.
T Consensus 4 ~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~ 40 (65)
T 1g25_A 4 QGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFV 40 (65)
T ss_dssp TCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHH
T ss_pred CcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHH
Confidence 46999999 78888 5789999999999998864
No 97
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.52 E-value=8.3e-05 Score=55.27 Aligned_cols=49 Identities=24% Similarity=0.487 Sum_probs=40.8
Q ss_pred CceeccCccccccCCcceEEEccCCccchHHHHHHHhhcC--CCCCCCCCCCCC
Q 022029 210 KSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVD--KVCLVCNKPCKE 261 (304)
Q Consensus 210 ~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~~--~~CPvC~~~f~~ 261 (304)
....|+||+..|..... -..|||.|-..||.+|++.. ..||+|+.++..
T Consensus 14 ~i~~C~IC~~~i~~g~~---C~~C~h~fH~~Ci~kWl~~~~~~~CP~Cr~~w~~ 64 (74)
T 2ct0_A 14 AVKICNICHSLLIQGQS---CETCGIRMHLPCVAKYFQSNAEPRCPHCNDYWPH 64 (74)
T ss_dssp SSCBCSSSCCBCSSSEE---CSSSCCEECHHHHHHHSTTCSSCCCTTTCSCCCS
T ss_pred CCCcCcchhhHcccCCc---cCCCCchhhHHHHHHHHHhcCCCCCCCCcCcCCC
Confidence 45689999999986532 34999999999999999865 799999998863
No 98
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.49 E-value=6e-05 Score=54.52 Aligned_cols=36 Identities=25% Similarity=0.560 Sum_probs=32.7
Q ss_pred cCCCcceecccCCCCCceecCCCceeehhhHHHHHH
Q 022029 37 IKPFDACCLCLKPFIDPLCCQKGHIYCKECILECLL 72 (304)
Q Consensus 37 ~~~F~~C~LcL~p~~dPV~t~~G~lyckEcIle~ll 72 (304)
+.....|.+|+..+.+||.++-||+||++||..+|.
T Consensus 17 ~~~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~~ 52 (73)
T 2ysl_A 17 LQEEVICPICLDILQKPVTIDCGHNFCLKCITQIGE 52 (73)
T ss_dssp CCCCCBCTTTCSBCSSEEECTTCCEEEHHHHHHHCS
T ss_pred CccCCEeccCCcccCCeEEcCCCChhhHHHHHHHHH
Confidence 455678999999999999999999999999999885
No 99
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=97.47 E-value=9e-05 Score=58.78 Aligned_cols=33 Identities=33% Similarity=0.807 Sum_probs=30.7
Q ss_pred CcceecccCCCCCceecCCCceeehhhHHHHHH
Q 022029 40 FDACCLCLKPFIDPLCCQKGHIYCKECILECLL 72 (304)
Q Consensus 40 F~~C~LcL~p~~dPV~t~~G~lyckEcIle~ll 72 (304)
...|.+|+..+.+||.++-||.||++||..+|.
T Consensus 23 ~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~ 55 (116)
T 1rmd_A 23 SISCQICEHILADPVETSCKHLFCRICILRCLK 55 (116)
T ss_dssp HTBCTTTCSBCSSEEECTTSCEEEHHHHHHHHH
T ss_pred CCCCCCCCcHhcCcEEcCCCCcccHHHHHHHHh
Confidence 467999999999999999999999999999885
No 100
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=97.42 E-value=5.4e-05 Score=62.20 Aligned_cols=31 Identities=29% Similarity=0.717 Sum_probs=29.5
Q ss_pred ceecccCCCCCceecCCCceeehhhHHHHHH
Q 022029 42 ACCLCLKPFIDPLCCQKGHIYCKECILECLL 72 (304)
Q Consensus 42 ~C~LcL~p~~dPV~t~~G~lyckEcIle~ll 72 (304)
.|.+|+..+.+||.++-||.||++||..|+.
T Consensus 55 ~C~iC~~~~~~~~~~~CgH~fc~~Ci~~~~~ 85 (138)
T 4ayc_A 55 QCIICSEYFIEAVTLNCAHSFCSYCINEWMK 85 (138)
T ss_dssp BCTTTCSBCSSEEEETTSCEEEHHHHHHHTT
T ss_pred CCcccCcccCCceECCCCCCccHHHHHHHHH
Confidence 6999999999999999999999999999975
No 101
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.41 E-value=8.7e-05 Score=52.82 Aligned_cols=39 Identities=18% Similarity=0.578 Sum_probs=33.5
Q ss_pred CCcCCCcceecccCCCCCc-------eecCCCceeehhhHHHHHHH
Q 022029 35 DSIKPFDACCLCLKPFIDP-------LCCQKGHIYCKECILECLLS 73 (304)
Q Consensus 35 ds~~~F~~C~LcL~p~~dP-------V~t~~G~lyckEcIle~ll~ 73 (304)
++...-..|.+|+..+.+| |.++-||+||++||..||..
T Consensus 10 ~~~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~ 55 (69)
T 2ea6_A 10 LRPSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN 55 (69)
T ss_dssp CCTTCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHH
T ss_pred cCCCCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHc
Confidence 3455668899999999888 88999999999999999854
No 102
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=97.39 E-value=0.00013 Score=61.55 Aligned_cols=37 Identities=24% Similarity=0.574 Sum_probs=32.2
Q ss_pred CcCCCcceecccCCCCCceec-CCCceeehhhHHHHHH
Q 022029 36 SIKPFDACCLCLKPFIDPLCC-QKGHIYCKECILECLL 72 (304)
Q Consensus 36 s~~~F~~C~LcL~p~~dPV~t-~~G~lyckEcIle~ll 72 (304)
++.....|.+|+..+.+||.+ +.||+||++||..||.
T Consensus 50 ~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~ 87 (165)
T 2ckl_B 50 SLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALR 87 (165)
T ss_dssp CCHHHHBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHH
T ss_pred hCCCCCCCcccChHhhCcCEeCCCCChhHHHHHHHHHH
Confidence 344556899999999999987 8999999999999975
No 103
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=97.32 E-value=0.00011 Score=58.99 Aligned_cols=34 Identities=21% Similarity=0.445 Sum_probs=31.3
Q ss_pred CCcceecccCCCCCceecCCCceeehhhHHHHHH
Q 022029 39 PFDACCLCLKPFIDPLCCQKGHIYCKECILECLL 72 (304)
Q Consensus 39 ~F~~C~LcL~p~~dPV~t~~G~lyckEcIle~ll 72 (304)
.-..|.+|+..+.+||.++-||.||+.||..++.
T Consensus 51 ~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~ 84 (124)
T 3fl2_A 51 ETFQCICCQELVFRPITTVCQHNVCKDCLDRSFR 84 (124)
T ss_dssp HHTBCTTTSSBCSSEEECTTSCEEEHHHHHHHHH
T ss_pred cCCCCCcCChHHcCcEEeeCCCcccHHHHHHHHh
Confidence 3467999999999999999999999999999986
No 104
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=97.25 E-value=5.9e-05 Score=59.15 Aligned_cols=37 Identities=35% Similarity=0.675 Sum_probs=32.8
Q ss_pred CcCCCcceecccCCCCCceec-CCCceeehhhHHHHHH
Q 022029 36 SIKPFDACCLCLKPFIDPLCC-QKGHIYCKECILECLL 72 (304)
Q Consensus 36 s~~~F~~C~LcL~p~~dPV~t-~~G~lyckEcIle~ll 72 (304)
.+.....|.+|+..+.+||.+ +-||.||+.||..+|.
T Consensus 11 ~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~ 48 (108)
T 2ckl_A 11 ELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE 48 (108)
T ss_dssp HHGGGTBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHT
T ss_pred ccCCcCCCccCChHHhCcCEeCCCCChhhHHHHHHHHH
Confidence 345567899999999999987 9999999999999985
No 105
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=97.18 E-value=4.8e-05 Score=55.82 Aligned_cols=37 Identities=27% Similarity=0.617 Sum_probs=33.1
Q ss_pred cCCCcceecccCCCCCceecCCCceeehhhHHHHHHH
Q 022029 37 IKPFDACCLCLKPFIDPLCCQKGHIYCKECILECLLS 73 (304)
Q Consensus 37 ~~~F~~C~LcL~p~~dPV~t~~G~lyckEcIle~ll~ 73 (304)
+.....|.+|+..+.+||.++-||.||++||..|+..
T Consensus 9 ~~~~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~~~~~ 45 (79)
T 2egp_A 9 VQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKE 45 (79)
T ss_dssp CCCCCEETTTTEECSSCCCCSSSCCCCHHHHSCCCCC
T ss_pred cccCCCCcCCCcccCCeeECCCCCHHHHHHHHHHHHh
Confidence 4456789999999999999999999999999999863
No 106
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=97.10 E-value=0.00027 Score=54.36 Aligned_cols=35 Identities=29% Similarity=0.554 Sum_probs=31.3
Q ss_pred CCCcceecccCCCCCceec-CCCceeehhhHHHHHH
Q 022029 38 KPFDACCLCLKPFIDPLCC-QKGHIYCKECILECLL 72 (304)
Q Consensus 38 ~~F~~C~LcL~p~~dPV~t-~~G~lyckEcIle~ll 72 (304)
.....|.+|+..+.+||.+ +-||.||+.||..|+.
T Consensus 20 ~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~ 55 (99)
T 2y43_A 20 DDLLRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLS 55 (99)
T ss_dssp HHHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHT
T ss_pred CCCCCcccCChhhCCcCEECCCCCHhhHHHHHHHHH
Confidence 3456899999999999987 8999999999999985
No 107
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=97.10 E-value=0.00023 Score=58.95 Aligned_cols=36 Identities=28% Similarity=0.578 Sum_probs=32.2
Q ss_pred cCCCcceecccCCCCCceecCCCceeehhhHHHHHH
Q 022029 37 IKPFDACCLCLKPFIDPLCCQKGHIYCKECILECLL 72 (304)
Q Consensus 37 ~~~F~~C~LcL~p~~dPV~t~~G~lyckEcIle~ll 72 (304)
+..-..|.+|+..+.+||.++-||+||+.||..+|-
T Consensus 28 l~~~~~C~IC~~~~~~pv~~~CgH~FC~~Ci~~~~~ 63 (141)
T 3knv_A 28 LEAKYLCSACRNVLRRPFQAQCGHRYCSFCLASILS 63 (141)
T ss_dssp CCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHGG
T ss_pred CCcCcCCCCCChhhcCcEECCCCCccCHHHHHHHHh
Confidence 344568999999999999999999999999999874
No 108
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=96.97 E-value=0.00012 Score=57.99 Aligned_cols=37 Identities=19% Similarity=0.508 Sum_probs=32.3
Q ss_pred cCCCcceecccCCCCCceecCCCceeehhhHHHHHHH
Q 022029 37 IKPFDACCLCLKPFIDPLCCQKGHIYCKECILECLLS 73 (304)
Q Consensus 37 ~~~F~~C~LcL~p~~dPV~t~~G~lyckEcIle~ll~ 73 (304)
......|.+|+..+.+||.++-||.||+.||..++..
T Consensus 12 ~~~~~~C~iC~~~~~~p~~~~CgH~fC~~Ci~~~~~~ 48 (115)
T 3l11_A 12 SLSECQCGICMEILVEPVTLPCNHTLCKPCFQSTVEK 48 (115)
T ss_dssp CHHHHBCTTTCSBCSSCEECTTSCEECHHHHCCCCCT
T ss_pred CCCCCCCccCCcccCceeEcCCCCHHhHHHHHHHHhH
Confidence 3445789999999999999999999999999988743
No 109
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.92 E-value=0.001 Score=48.13 Aligned_cols=36 Identities=19% Similarity=0.471 Sum_probs=30.4
Q ss_pred CCCcceecccCCCCCceec---CCCceeehhhHHHHHHH
Q 022029 38 KPFDACCLCLKPFIDPLCC---QKGHIYCKECILECLLS 73 (304)
Q Consensus 38 ~~F~~C~LcL~p~~dPV~t---~~G~lyckEcIle~ll~ 73 (304)
..-+.|.+|+..+.+|+.. +-||+||.+||.+||..
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~ 51 (74)
T 2ep4_A 13 NLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEV 51 (74)
T ss_dssp CCSCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHH
T ss_pred CCCCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHc
Confidence 4457899999999877644 89999999999999864
No 110
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=96.86 E-value=0.0011 Score=48.57 Aligned_cols=37 Identities=16% Similarity=0.302 Sum_probs=30.8
Q ss_pred CcCCCcceecccCCCCCc---eecCCCceeehhhHHHHHH
Q 022029 36 SIKPFDACCLCLKPFIDP---LCCQKGHIYCKECILECLL 72 (304)
Q Consensus 36 s~~~F~~C~LcL~p~~dP---V~t~~G~lyckEcIle~ll 72 (304)
....-..|.+||..+.+| +..+-||+||++||..||.
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~ 50 (78)
T 2ect_A 11 HVGSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLE 50 (78)
T ss_dssp TSSSSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHT
T ss_pred cCCCCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHH
Confidence 345567899999999866 4568999999999999984
No 111
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=96.81 E-value=0.0009 Score=45.42 Aligned_cols=34 Identities=24% Similarity=0.468 Sum_probs=29.7
Q ss_pred CcceecccCCCCC----ceecCCCceeehhhHHHHHHH
Q 022029 40 FDACCLCLKPFID----PLCCQKGHIYCKECILECLLS 73 (304)
Q Consensus 40 F~~C~LcL~p~~d----PV~t~~G~lyckEcIle~ll~ 73 (304)
-+.|.+|+..+.+ +++.+-||+|+.+||.+||..
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~ 42 (55)
T 2ecm_A 5 SSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKE 42 (55)
T ss_dssp CCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHH
T ss_pred CCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHc
Confidence 3679999999866 778999999999999999864
No 112
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=96.77 E-value=0.00056 Score=53.79 Aligned_cols=32 Identities=16% Similarity=0.460 Sum_probs=29.0
Q ss_pred cceecccCCCCCce------------------ecCCCceeehhhHHHHHH
Q 022029 41 DACCLCLKPFIDPL------------------CCQKGHIYCKECILECLL 72 (304)
Q Consensus 41 ~~C~LcL~p~~dPV------------------~t~~G~lyckEcIle~ll 72 (304)
+.|.+||.++.+|+ .++-||+||.+||.+||.
T Consensus 26 ~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~ 75 (114)
T 1v87_A 26 EDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYC 75 (114)
T ss_dssp CEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHH
T ss_pred CcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHH
Confidence 68999999998876 688999999999999985
No 113
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=96.76 E-value=0.0008 Score=47.81 Aligned_cols=32 Identities=22% Similarity=0.513 Sum_probs=29.1
Q ss_pred cceecccCCCCCc-eecCCCceeehhhHHHHHH
Q 022029 41 DACCLCLKPFIDP-LCCQKGHIYCKECILECLL 72 (304)
Q Consensus 41 ~~C~LcL~p~~dP-V~t~~G~lyckEcIle~ll 72 (304)
+.|.+|+..+.+| +..+-||+||.+||..|+.
T Consensus 6 ~~C~IC~~~~~~~~~~~~C~H~fc~~Ci~~~~~ 38 (68)
T 1chc_A 6 ERCPICLEDPSNYSMALPCLHAFCYVCITRWIR 38 (68)
T ss_dssp CCCSSCCSCCCSCEEETTTTEEESTTHHHHHHH
T ss_pred CCCeeCCccccCCcEecCCCCeeHHHHHHHHHh
Confidence 6799999999997 6888999999999999874
No 114
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=96.75 E-value=0.0015 Score=46.53 Aligned_cols=37 Identities=19% Similarity=0.404 Sum_probs=30.6
Q ss_pred cCCCcceecccCCCC---CceecCCCceeehhhHHHHHHH
Q 022029 37 IKPFDACCLCLKPFI---DPLCCQKGHIYCKECILECLLS 73 (304)
Q Consensus 37 ~~~F~~C~LcL~p~~---dPV~t~~G~lyckEcIle~ll~ 73 (304)
...-..|.+|+..+. .++.++-||+||.+||..||..
T Consensus 11 ~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~ 50 (69)
T 2kiz_A 11 EDTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLIT 50 (69)
T ss_dssp TTCCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHH
T ss_pred CCCCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHc
Confidence 344578999998874 5678999999999999999864
No 115
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=96.73 E-value=0.00028 Score=56.14 Aligned_cols=35 Identities=26% Similarity=0.815 Sum_probs=31.0
Q ss_pred CCCcceecccCCCCCceec-CCCceeehhhHHHHHH
Q 022029 38 KPFDACCLCLKPFIDPLCC-QKGHIYCKECILECLL 72 (304)
Q Consensus 38 ~~F~~C~LcL~p~~dPV~t-~~G~lyckEcIle~ll 72 (304)
.....|.+|+..+.+||.+ +-||.||+.||..++-
T Consensus 20 ~~~~~C~IC~~~~~~pv~~~~CgH~fC~~Ci~~~~~ 55 (117)
T 1jm7_B 20 EKLLRCSRCTNILREPVCLGGCEHIFCSNCVSDCIG 55 (117)
T ss_dssp HHTTSCSSSCSCCSSCBCCCSSSCCBCTTTGGGGTT
T ss_pred hhCCCCCCCChHhhCccEeCCCCCHHHHHHHHHHhc
Confidence 3457899999999999998 8999999999998863
No 116
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=96.70 E-value=0.00057 Score=47.30 Aligned_cols=31 Identities=23% Similarity=0.366 Sum_probs=28.1
Q ss_pred CCcceecccCCCCCceecCCCceeehhhHHH
Q 022029 39 PFDACCLCLKPFIDPLCCQKGHIYCKECILE 69 (304)
Q Consensus 39 ~F~~C~LcL~p~~dPV~t~~G~lyckEcIle 69 (304)
....|.+|+..+.+||.++-||.||+.||..
T Consensus 5 ~~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~ 35 (56)
T 1bor_A 5 QFLRCQQCQAEAKCPKLLPCLHTLCSGCLEA 35 (56)
T ss_dssp CCSSCSSSCSSCBCCSCSTTSCCSBTTTCSS
T ss_pred cCCCceEeCCccCCeEEcCCCCcccHHHHcc
Confidence 4567999999999999999999999999865
No 117
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.68 E-value=0.0011 Score=47.47 Aligned_cols=35 Identities=26% Similarity=0.654 Sum_probs=31.1
Q ss_pred cCCCcceecccCCCCCceecCCCceeehhhHHHHHH
Q 022029 37 IKPFDACCLCLKPFIDPLCCQKGHIYCKECILECLL 72 (304)
Q Consensus 37 ~~~F~~C~LcL~p~~dPV~t~~G~lyckEcIle~ll 72 (304)
...-..|.+|+..+.+ |.++-||+||++||..||.
T Consensus 12 ~~~~~~C~IC~~~~~~-~~~~CgH~fc~~Ci~~~~~ 46 (70)
T 2ecn_A 12 LTDEEECCICMDGRAD-LILPCAHSFCQKCIDKWSD 46 (70)
T ss_dssp CCCCCCCSSSCCSCCS-EEETTTEEECHHHHHHSSC
T ss_pred CCCCCCCeeCCcCccC-cccCCCCcccHHHHHHHHH
Confidence 3456789999999999 9999999999999999875
No 118
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=96.51 E-value=0.0029 Score=44.75 Aligned_cols=48 Identities=19% Similarity=0.548 Sum_probs=38.2
Q ss_pred CceeccCccccccCCcceEEEccCCc-----cchHHHHHHHhh--cCCCCCCCCCCCCC
Q 022029 210 KSFICPSCKVTLTNTLSLVALSSCGH-----VFCKKCADKFMA--VDKVCLVCNKPCKE 261 (304)
Q Consensus 210 ~~~~CPIc~k~~~~~~~~v~l~~CGh-----Vfc~~Ci~~~~k--~~~~CPvC~~~f~~ 261 (304)
..-.|.||+....+. ++.||.+ .|-..||.+|+. .+..||+|+.+|.-
T Consensus 5 ~~~~CrIC~~~~~~~----l~~PC~C~gs~~~~H~~Cl~~W~~~~~~~~C~~C~~~~~~ 59 (60)
T 1vyx_A 5 DVPVCWICNEELGNE----RFRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYNT 59 (60)
T ss_dssp SCCEETTTTEECSCC----CCCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBCCC
T ss_pred CCCEeEEeecCCCCc----eecCcCCCCchhhhHHHHHHHHHHhCCCCccCCCCCeeec
Confidence 456899999886554 3678754 899999999986 46899999999863
No 119
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.32 E-value=0.0023 Score=46.50 Aligned_cols=36 Identities=17% Similarity=0.364 Sum_probs=30.9
Q ss_pred CCCcceecccCCCCCc---eecCCCceeehhhHHHHHHH
Q 022029 38 KPFDACCLCLKPFIDP---LCCQKGHIYCKECILECLLS 73 (304)
Q Consensus 38 ~~F~~C~LcL~p~~dP---V~t~~G~lyckEcIle~ll~ 73 (304)
..-+.|.+||..+.++ +..+-||+|+.+||..||..
T Consensus 21 ~~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~ 59 (75)
T 1x4j_A 21 SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKA 59 (75)
T ss_dssp SSCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHH
T ss_pred CCCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHc
Confidence 3457899999999877 67889999999999999853
No 120
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=96.24 E-value=0.003 Score=47.88 Aligned_cols=35 Identities=17% Similarity=0.334 Sum_probs=30.3
Q ss_pred CCCcceecccCCCCC---ceecCCCceeehhhHHHHHH
Q 022029 38 KPFDACCLCLKPFID---PLCCQKGHIYCKECILECLL 72 (304)
Q Consensus 38 ~~F~~C~LcL~p~~d---PV~t~~G~lyckEcIle~ll 72 (304)
..-..|.+||..+.+ ++..+-||+||.+||..||.
T Consensus 38 ~~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~ 75 (91)
T 2l0b_A 38 GQEMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQ 75 (91)
T ss_dssp SSCSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHHT
T ss_pred CCCCCCcccChhhcCCCcEEecCCCChHHHHHHHHHHH
Confidence 345789999999876 77899999999999999985
No 121
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=96.17 E-value=0.0034 Score=47.78 Aligned_cols=35 Identities=23% Similarity=0.431 Sum_probs=29.9
Q ss_pred CcceecccCCCCCceec---CCCceeehhhHHHHHHHh
Q 022029 40 FDACCLCLKPFIDPLCC---QKGHIYCKECILECLLSQ 74 (304)
Q Consensus 40 F~~C~LcL~p~~dPV~t---~~G~lyckEcIle~ll~q 74 (304)
...|.+|+..+.+|+.. +-||.||++||..|+-.+
T Consensus 5 ~~~C~IC~~~~~~~~~~~l~~CgH~FC~~Cl~~~~~~~ 42 (94)
T 1wim_A 5 SSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELL 42 (94)
T ss_dssp BCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHH
T ss_pred CcCCcccCcccccccceEcCCCCCcccHHHHHHHHHHH
Confidence 35699999999999754 689999999999998653
No 122
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=96.14 E-value=0.0027 Score=43.01 Aligned_cols=34 Identities=26% Similarity=0.381 Sum_probs=29.1
Q ss_pred CCcceecccCCCCC---ceecC-CCceeehhhHHHHHH
Q 022029 39 PFDACCLCLKPFID---PLCCQ-KGHIYCKECILECLL 72 (304)
Q Consensus 39 ~F~~C~LcL~p~~d---PV~t~-~G~lyckEcIle~ll 72 (304)
.-..|.+|+..+.+ ++..+ -||+|+.+||.+||.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~ 41 (55)
T 1iym_A 4 DGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLG 41 (55)
T ss_dssp CSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTT
T ss_pred CCCcCccCCccccCCCceEECCCCCCcccHHHHHHHHH
Confidence 34679999999987 77777 799999999999874
No 123
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=96.02 E-value=0.0029 Score=60.77 Aligned_cols=34 Identities=24% Similarity=0.499 Sum_probs=31.1
Q ss_pred CCcceecccCCCCCceecCCCceeehhhHHHHHH
Q 022029 39 PFDACCLCLKPFIDPLCCQKGHIYCKECILECLL 72 (304)
Q Consensus 39 ~F~~C~LcL~p~~dPV~t~~G~lyckEcIle~ll 72 (304)
.+..|.+|+....+||.+|.||+||..||..++-
T Consensus 331 ~~~~C~ICle~~~~pv~lpCGH~FC~~Ci~~wl~ 364 (389)
T 2y1n_A 331 TFQLCKICAENDKDVKIEPCGHLMCTSCLTSWQE 364 (389)
T ss_dssp SSSBCTTTSSSBCCEEEETTCCEECHHHHHHHHH
T ss_pred CCCCCCccCcCCCCeEEeCCCChhhHHHHHHHHh
Confidence 3578999999999999999999999999988874
No 124
>3m62_A Ubiquitin conjugation factor E4; armadillo-like repeats, UBL conjugation pathway, DNA damage, nucleus, phosphoprotein; HET: 1PE; 2.40A {Saccharomyces cerevisiae} PDB: 3m63_A* 2qiz_A 2qj0_A
Probab=95.88 E-value=0.0046 Score=65.39 Aligned_cols=36 Identities=17% Similarity=0.005 Sum_probs=32.2
Q ss_pred cCCCcceecccCCCCCceecCCC-ceeehhhHHHHHH
Q 022029 37 IKPFDACCLCLKPFIDPLCCQKG-HIYCKECILECLL 72 (304)
Q Consensus 37 ~~~F~~C~LcL~p~~dPV~t~~G-~lyckEcIle~ll 72 (304)
+=+.-.|-|++...+|||++|+| +.|+|++|..||+
T Consensus 888 iP~~F~cPIs~~lM~DPVilpsG~~TydR~~I~~wl~ 924 (968)
T 3m62_A 888 VPDEFLDPLMYTIMKDPVILPASKMNIDRSTIKAHLL 924 (968)
T ss_dssp SCGGGBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHT
T ss_pred CcHHhCCcchhhHHhCCeEcCCCCEEECHHHHHHHHh
Confidence 44567899999999999999997 6899999999986
No 125
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.77 E-value=0.0038 Score=45.57 Aligned_cols=28 Identities=29% Similarity=0.684 Sum_probs=26.2
Q ss_pred CcceecccCCCCCceecCCCce-eehhhH
Q 022029 40 FDACCLCLKPFIDPLCCQKGHI-YCKECI 67 (304)
Q Consensus 40 F~~C~LcL~p~~dPV~t~~G~l-yckEcI 67 (304)
-..|.+|+....+||.+|-||+ ||.+||
T Consensus 25 ~~~C~IC~~~~~~~~~~pCgH~~~C~~C~ 53 (75)
T 2ecg_A 25 EKLCKICMDRNIAIVFVPCGHLVTCKQCA 53 (75)
T ss_dssp HHSCSSSCSSCCCBCCSSSCCCCBCHHHH
T ss_pred CCCCCcCCCCCCCEEEecCCCHHHHHHHh
Confidence 3579999999999999999999 999998
No 126
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=95.71 E-value=0.0014 Score=62.15 Aligned_cols=52 Identities=12% Similarity=0.255 Sum_probs=39.6
Q ss_pred CCceeccCccccccCCcc----eEEEccCCccchHHHHHHHhhcC-----------CCCCCCCCCCC
Q 022029 209 DKSFICPSCKVTLTNTLS----LVALSSCGHVFCKKCADKFMAVD-----------KVCLVCNKPCK 260 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~----~v~l~~CGhVfc~~Ci~~~~k~~-----------~~CPvC~~~f~ 260 (304)
++...|+||...+.+... ..-..+|||.|-..||.+|++.. ..||.|+.+++
T Consensus 306 e~~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~pIs 372 (381)
T 3k1l_B 306 NEELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAKLS 372 (381)
T ss_dssp CSCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCEEE
T ss_pred cCCccCcccceeecCCCCCccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCcCC
Confidence 567789999999887222 11234899999999999998631 47999999764
No 127
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.39 E-value=0.0065 Score=45.06 Aligned_cols=35 Identities=17% Similarity=0.421 Sum_probs=28.7
Q ss_pred CcceecccCCCCC--------------ceecC-CCceeehhhHHHHHHHh
Q 022029 40 FDACCLCLKPFID--------------PLCCQ-KGHIYCKECILECLLSQ 74 (304)
Q Consensus 40 F~~C~LcL~p~~d--------------PV~t~-~G~lyckEcIle~ll~q 74 (304)
-+.|++|+.++.+ +++.+ -||+|.++||.+||..+
T Consensus 15 ~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~ 64 (81)
T 2ecl_A 15 CDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQN 64 (81)
T ss_dssp CSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTTC
T ss_pred CCCCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHHhC
Confidence 4679999999987 44544 79999999999998653
No 128
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=95.28 E-value=0.065 Score=43.31 Aligned_cols=33 Identities=27% Similarity=0.692 Sum_probs=22.8
Q ss_pred eeccCccccccCCcceEEEccCCccchHHHHHH
Q 022029 212 FICPSCKVTLTNTLSLVALSSCGHVFCKKCADK 244 (304)
Q Consensus 212 ~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~ 244 (304)
..|.+|...|+-..+=---+.||+|||..|...
T Consensus 70 ~~C~~C~~~Fs~~~RrHHCR~CG~vfC~~Cs~~ 102 (125)
T 1joc_A 70 QNCMACGKGFSVTVRRHHCRQCGNIFCAECSAK 102 (125)
T ss_dssp CBCTTTCCBCCSSSCCEECTTTCCEECGGGSCE
T ss_pred CCCcCcCCccccccccccCCCCCeEEChHHhCC
Confidence 368888888865332234578999999888554
No 129
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=95.19 E-value=0.0072 Score=44.04 Aligned_cols=30 Identities=27% Similarity=0.607 Sum_probs=27.4
Q ss_pred CcceecccCCCCCceecCCCce-eehhhHHH
Q 022029 40 FDACCLCLKPFIDPLCCQKGHI-YCKECILE 69 (304)
Q Consensus 40 F~~C~LcL~p~~dPV~t~~G~l-yckEcIle 69 (304)
-..|.+|+....+||..|-||+ ||.+||..
T Consensus 24 ~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~ 54 (74)
T 4ic3_A 24 EKLCKICMDRNIAIVFVPCGHLVTCKQCAEA 54 (74)
T ss_dssp HTBCTTTSSSBCCEEEETTCCBCCCHHHHTT
T ss_pred CCCCCCCCCCCCCEEEcCCCChhHHHHhhhc
Confidence 4579999999999999999999 99999865
No 130
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=95.02 E-value=0.015 Score=45.70 Aligned_cols=34 Identities=24% Similarity=0.475 Sum_probs=28.8
Q ss_pred CcceecccCCCCCc------------------eecCCCceeehhhHHHHHHH
Q 022029 40 FDACCLCLKPFIDP------------------LCCQKGHIYCKECILECLLS 73 (304)
Q Consensus 40 F~~C~LcL~p~~dP------------------V~t~~G~lyckEcIle~ll~ 73 (304)
-+.|++|+.++.++ +..+-||+|..+||..||..
T Consensus 37 ~d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~ 88 (106)
T 3dpl_R 37 VDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT 88 (106)
T ss_dssp SCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTT
T ss_pred CCCCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHHc
Confidence 37899999999876 23678999999999999863
No 131
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.97 E-value=0.021 Score=41.10 Aligned_cols=30 Identities=17% Similarity=0.455 Sum_probs=27.7
Q ss_pred CCcceecccCCCCCceecCCCce-eehhhHH
Q 022029 39 PFDACCLCLKPFIDPLCCQKGHI-YCKECIL 68 (304)
Q Consensus 39 ~F~~C~LcL~p~~dPV~t~~G~l-yckEcIl 68 (304)
....|.+|+....++|..|-||+ ||.+|+.
T Consensus 14 ~~~~C~IC~~~~~~~v~~pCgH~~~C~~C~~ 44 (68)
T 2ea5_A 14 NSKDCVVCQNGTVNWVLLPCRHTCLCDGCVK 44 (68)
T ss_dssp CSSCCSSSSSSCCCCEETTTTBCCSCTTHHH
T ss_pred CCCCCCCcCcCCCCEEEECCCChhhhHHHHh
Confidence 35679999999999999999999 9999987
No 132
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=94.71 E-value=0.018 Score=42.67 Aligned_cols=34 Identities=24% Similarity=0.383 Sum_probs=27.4
Q ss_pred CCCcceecccCCC--CCceecC--CCceeehhhHHHHH
Q 022029 38 KPFDACCLCLKPF--IDPLCCQ--KGHIYCKECILECL 71 (304)
Q Consensus 38 ~~F~~C~LcL~p~--~dPV~t~--~G~lyckEcIle~l 71 (304)
.....|.+||.|+ .|++..| -||.||+.||..++
T Consensus 9 ~~~~~CpICle~~~~~d~~~~p~~CGH~fC~~Cl~~~~ 46 (78)
T 1e4u_A 9 EDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIR 46 (78)
T ss_dssp CCCCBCTTTCCBCCTTTTTCCSSTTSCCCCHHHHHHHT
T ss_pred ccCCcCCccCccCccccccccccCCCCCcCHHHHHHHH
Confidence 3456799999998 4666655 89999999998764
No 133
>3m62_A Ubiquitin conjugation factor E4; armadillo-like repeats, UBL conjugation pathway, DNA damage, nucleus, phosphoprotein; HET: 1PE; 2.40A {Saccharomyces cerevisiae} PDB: 3m63_A* 2qiz_A 2qj0_A
Probab=94.12 E-value=0.028 Score=59.50 Aligned_cols=55 Identities=9% Similarity=0.102 Sum_probs=48.8
Q ss_pred CCceeccCccccccCCcceEEEccCC-ccchHHHHHHHhhcCCCCCCCCCCCCCCCceEe
Q 022029 209 DKSFICPSCKVTLTNTLSLVALSSCG-HVFCKKCADKFMAVDKVCLVCNKPCKERNLVNV 267 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~v~l~~CG-hVfc~~Ci~~~~k~~~~CPvC~~~f~~~diI~L 267 (304)
-..|.|||+.+.+.++ |+.+.| +.|=..+|++|+.....||..+.+++..++|+-
T Consensus 889 P~~F~cPIs~~lM~DP----VilpsG~~TydR~~I~~wl~~~~tdP~Tr~~L~~~~liPN 944 (968)
T 3m62_A 889 PDEFLDPLMYTIMKDP----VILPASKMNIDRSTIKAHLLSDSTDPFNRMPLKLEDVTPN 944 (968)
T ss_dssp CGGGBCTTTCSBCSSE----EECTTTCCEEEHHHHHHHHTTCCBCTTTCCBCCGGGCEEC
T ss_pred cHHhCCcchhhHHhCC----eEcCCCCEEECHHHHHHHHhcCCCCCCCCCCCCccccccc
Confidence 3579999999999999 577887 589999999999878899999999998888873
No 134
>1m3v_A FLIN4, fusion of the LIM interacting domain of LDB1 and the N-terminal LIM domain of LMO4...; fusion protein, LMO proteins, metal binding protein; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=93.84 E-value=0.044 Score=43.60 Aligned_cols=81 Identities=14% Similarity=0.192 Sum_probs=55.0
Q ss_pred ccCCCCCCcCCCCCceeee-cccCCCcccccCCCCCceeccCccccccCC-cceEEEccCCccchHHHHHHHhhcCCCCC
Q 022029 176 TICPEGKEKLKLKSLFPVY-FTEDKSEEKKSSSNDKSFICPSCKVTLTNT-LSLVALSSCGHVFCKKCADKFMAVDKVCL 253 (304)
Q Consensus 176 ~~CP~sg~~l~lKDLi~l~-f~~~~~~~~~~~~~~~~~~CPIc~k~~~~~-~~~v~l~~CGhVfc~~Ci~~~~k~~~~CP 253 (304)
+.|+.-+.++.-..+|... -.+-. .-|.|..|.+.|.+. ..++ ..=|.+||..|+.+++....+|.
T Consensus 6 ~~C~~C~~~I~~~~~~~a~~~~wH~----------~CF~C~~C~~~L~~~~~~~~--~~~g~~yC~~cy~~~f~~~~~C~ 73 (122)
T 1m3v_A 6 KRCAGCGGKIADRFLLYAMDSYWHS----------RCLKCSSCQAQLGDIGTSSY--TKSGMILCRNDYIRLFGNSGAGG 73 (122)
T ss_dssp CCBSSSSSCCCSSCCEEETTEEECH----------HHHCCSSSCCCTTTSEECCE--EETTEEECHHHHHHHHCCCCSSS
T ss_pred CCCcccCCEeCCcEEEEECCceeHh----------hCCCcCCCCCcccccCCeEE--EECCeeecHHHHHHHcCCCCccc
Confidence 5777777777655544321 11111 247899999999742 2332 34499999999999876555899
Q ss_pred CCCCCCCCCCceEec
Q 022029 254 VCNKPCKERNLVNVE 268 (304)
Q Consensus 254 vC~~~f~~~diI~L~ 268 (304)
.|++++...+|+.+.
T Consensus 74 ~C~~~I~~~~~~~~g 88 (122)
T 1m3v_A 74 SGGHMGSGGDVMVVG 88 (122)
T ss_dssp CSSCCSCCEESSSSS
T ss_pred cCCCCcCchheEEcC
Confidence 999999987776543
No 135
>3i2d_A E3 SUMO-protein ligase SIZ1; signal transduction, replication, ring E3, PIAS, ubiquitin, UBC9, metal-binding, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=93.63 E-value=0.052 Score=51.70 Aligned_cols=52 Identities=21% Similarity=0.294 Sum_probs=38.9
Q ss_pred ceeccCccccccCCcceEEEccCCccch--HHHHHHHhh--cCCCCCCCCCCCCCCCce
Q 022029 211 SFICPSCKVTLTNTLSLVALSSCGHVFC--KKCADKFMA--VDKVCLVCNKPCKERNLV 265 (304)
Q Consensus 211 ~~~CPIc~k~~~~~~~~v~l~~CGhVfc--~~Ci~~~~k--~~~~CPvC~~~f~~~diI 265 (304)
.+.||++...|..+. --..|-|+-| ...+-.+.. ..|.||+|++.+...||+
T Consensus 249 SL~CPlS~~ri~~Pv---Rg~~C~HlQCFDl~sfL~~~~~~~~W~CPIC~k~~~~~dL~ 304 (371)
T 3i2d_A 249 SLQCPISYTRMKYPS---KSINCKHLQCFDALWFLHSQLQIPTWQCPVCQIDIALENLA 304 (371)
T ss_dssp ESBCTTTSSBCSSEE---EETTCCSSCCEEHHHHHHHHHHSCCCBCTTTCCBCCGGGEE
T ss_pred eecCCCccccccccC---cCCcCCCcceECHHHHHHHhhcCCceeCCCCCcccCHHHee
Confidence 478999999999984 4679999944 444444332 679999999999776543
No 136
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=93.45 E-value=0.069 Score=47.81 Aligned_cols=49 Identities=24% Similarity=0.491 Sum_probs=39.9
Q ss_pred CceeccCccccccCCcceEEEccCCccchHHHHHHHhhc--CCCCCCCCCCCCC
Q 022029 210 KSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAV--DKVCLVCNKPCKE 261 (304)
Q Consensus 210 ~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~--~~~CPvC~~~f~~ 261 (304)
....|.+|++..+-..+ -..|||.|-..|+.+|++. ...||.|+.++..
T Consensus 179 ~i~~C~iC~~iv~~g~~---C~~C~~~~H~~C~~~~~~~~~~~~CP~C~~~W~~ 229 (238)
T 3nw0_A 179 AVKICNICHSLLIQGQS---CETCGIRMHLPCVAKYFQSNAEPRCPHCNDYWPH 229 (238)
T ss_dssp TCCBCTTTCSBCSSCEE---CSSSCCEECHHHHHHHTTTCSSCBCTTTCCBCCS
T ss_pred CCCcCcchhhHHhCCcc---cCccChHHHHHHHHHHHHhCCCCCCCCCCCCCCC
Confidence 46789999999886532 3459999999999999864 4599999998865
No 137
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=93.15 E-value=0.036 Score=40.97 Aligned_cols=30 Identities=27% Similarity=0.681 Sum_probs=27.3
Q ss_pred CcceecccCCCCCceecCCCce-eehhhHHH
Q 022029 40 FDACCLCLKPFIDPLCCQKGHI-YCKECILE 69 (304)
Q Consensus 40 F~~C~LcL~p~~dPV~t~~G~l-yckEcIle 69 (304)
-..|.+|+....+||..|-||+ ||.+|+..
T Consensus 18 ~~~C~IC~~~~~~~v~~pCgH~~~C~~C~~~ 48 (79)
T 2yho_A 18 AMLCMVCCEEEINSTFCPCGHTVCCESCAAQ 48 (79)
T ss_dssp HTBCTTTSSSBCCEEEETTCBCCBCHHHHTT
T ss_pred CCEeEEeCcccCcEEEECCCCHHHHHHHHHh
Confidence 3579999999999999999999 99999864
No 138
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=92.98 E-value=0.018 Score=46.22 Aligned_cols=34 Identities=24% Similarity=0.501 Sum_probs=0.0
Q ss_pred cceecccCCCCCce-----------------e-cCCCceeehhhHHHHHHHh
Q 022029 41 DACCLCLKPFIDPL-----------------C-CQKGHIYCKECILECLLSQ 74 (304)
Q Consensus 41 ~~C~LcL~p~~dPV-----------------~-t~~G~lyckEcIle~ll~q 74 (304)
|.|++|+.++.+|. + .+-||+|..+||.+||..+
T Consensus 49 d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~~ 100 (117)
T 4a0k_B 49 DNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR 100 (117)
T ss_dssp ----------------------------------------------------
T ss_pred CcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHcC
Confidence 89999999998752 2 4679999999999998753
No 139
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=92.97 E-value=0.049 Score=38.36 Aligned_cols=33 Identities=27% Similarity=0.484 Sum_probs=28.6
Q ss_pred CCcceecccCCCCCceec--CCCce-eehhhHHHHH
Q 022029 39 PFDACCLCLKPFIDPLCC--QKGHI-YCKECILECL 71 (304)
Q Consensus 39 ~F~~C~LcL~p~~dPV~t--~~G~l-yckEcIle~l 71 (304)
.-+.|.+|+...+++|+. |-||+ ||.+|+....
T Consensus 6 ~~~~C~IC~~~~~~~~~~~~pCgH~~~C~~C~~~~~ 41 (63)
T 2vje_B 6 LLKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLK 41 (63)
T ss_dssp GGSBCTTTSSSBSCEEEEETTEEEEEECHHHHHHHH
T ss_pred cCCCCcccCCcCCCeEEEecCCCCHhHHHHHHHHHH
Confidence 346799999999999876 99999 9999998754
No 140
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.95 E-value=0.15 Score=37.87 Aligned_cols=36 Identities=22% Similarity=0.352 Sum_probs=29.5
Q ss_pred CCcceecccCCC--CCceecCC-----CceeehhhHHHHHHHh
Q 022029 39 PFDACCLCLKPF--IDPLCCQK-----GHIYCKECILECLLSQ 74 (304)
Q Consensus 39 ~F~~C~LcL~p~--~dPV~t~~-----G~lyckEcIle~ll~q 74 (304)
.-+.|++||..+ .+|++.|- +|.|-.+||..||...
T Consensus 14 ~~~~C~IC~~~~~~~~~l~~pC~C~Gs~h~fH~~Cl~~Wl~~~ 56 (80)
T 2d8s_A 14 SQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSS 56 (80)
T ss_dssp TSCCCSSSCCCCCSSSCEECSSSCCSSSCCEETTHHHHHHHHH
T ss_pred CCCCCeEcCccccCCCeeEeccccCCcCCeeCHHHHHHHHhhC
Confidence 357899999886 47887775 4999999999999753
No 141
>4fo9_A E3 SUMO-protein ligase PIAS2; E3 ligase, pinit domain, SP-ring domain, structural GE consortium, SGC; 2.39A {Homo sapiens} PDB: 2asq_B
Probab=92.89 E-value=0.08 Score=50.24 Aligned_cols=52 Identities=27% Similarity=0.476 Sum_probs=38.8
Q ss_pred ceeccCccccccCCcceEEEccCCcc--chHHHHHHHhh--cCCCCCCCCCCCCCCCce
Q 022029 211 SFICPSCKVTLTNTLSLVALSSCGHV--FCKKCADKFMA--VDKVCLVCNKPCKERNLV 265 (304)
Q Consensus 211 ~~~CPIc~k~~~~~~~~v~l~~CGhV--fc~~Ci~~~~k--~~~~CPvC~~~f~~~diI 265 (304)
.+.||++...+.-+. --..|-|+ |-...+-.+.. ..|.||+|++.+..+||+
T Consensus 215 SL~CPlS~~ri~~P~---Rg~~C~HlqCFDl~sfL~~~~~~~~W~CPiC~k~~~~~dL~ 270 (360)
T 4fo9_A 215 SLMCPLGKMRLTIPC---RAVTCTHLQCFDAALYLQMNEKKPTWICPVCDKKAAYESLI 270 (360)
T ss_dssp ESBCTTTCSBCSSEE---EETTCCCCCCEEHHHHHHHHHHSCCCBCTTTCSBCCGGGEE
T ss_pred eeeCCCccceeccCC---cCCCCCCCccCCHHHHHHHHhhCCCeECCCCCcccCHHHeE
Confidence 468999999998884 46799999 44444444332 579999999999876553
No 142
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=92.78 E-value=0.05 Score=38.42 Aligned_cols=32 Identities=19% Similarity=0.495 Sum_probs=28.5
Q ss_pred CcceecccCCCCCceec--CCCce-eehhhHHHHH
Q 022029 40 FDACCLCLKPFIDPLCC--QKGHI-YCKECILECL 71 (304)
Q Consensus 40 F~~C~LcL~p~~dPV~t--~~G~l-yckEcIle~l 71 (304)
-+.|.+|+....++|.. |-||+ ||.+|+..++
T Consensus 8 ~~~C~IC~~~~~~~~~~~~pCgH~~~C~~C~~~~~ 42 (64)
T 2vje_A 8 IEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLK 42 (64)
T ss_dssp GSCCTTTSSSCSCEEEEETTEEEEEECHHHHHHHH
T ss_pred cCCCCcCCCCCCCEEEECCCCCChhhHHHHHHHHH
Confidence 46799999999999977 99999 8999998765
No 143
>2ko5_A Ring finger protein Z; lassa fever virus-Z, negative regulator of EIF4E, cytoplasm, HOST-virus interaction, lipoprotein, membrane; NMR {Lassa virus josiah}
Probab=91.95 E-value=0.096 Score=40.33 Aligned_cols=65 Identities=17% Similarity=0.357 Sum_probs=49.1
Q ss_pred CCCceeccCccccccCCcceEEEccCCccchHHHHHHHhhcCCCCCCCCCCCCCCCceEecCCCcccccc
Q 022029 208 NDKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKERNLVNVEKGGTGFAAH 277 (304)
Q Consensus 208 ~~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~~~~CPvC~~~f~~~diI~L~~~gtgfaa~ 277 (304)
.-+.+-|-.|=-.+.+ +++=.-|.+|..|+..++..+..||+|+.++-.+=.+...+..--|.+.
T Consensus 25 ~~G~~nCKsCWf~~k~-----LV~C~dHYLCl~CLtlmL~~SdrCpIC~~pLPtkl~~~~~PSAPP~~~~ 89 (99)
T 2ko5_A 25 HLGPQFCKSCWFENKG-----LVECNNHYLCLNCLTLLLSVSNRCPICKMPLPTKLRPSAAPTAPPTGAA 89 (99)
T ss_dssp CSCCCCCCSSCSCCSS-----EEECSSCEEEHHHHHHTCSSSSEETTTTEECCCCSCTTTSCCCCCCSCC
T ss_pred ccCcccChhhccccCC-----eeeecchhhHHHHHHHHHhhccCCcccCCcCCcceecCcCCCCCCcccC
Confidence 4678999999776664 4555579999999999988888999999999765555555555444443
No 144
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=91.28 E-value=0.065 Score=50.61 Aligned_cols=30 Identities=23% Similarity=0.616 Sum_probs=27.6
Q ss_pred CcceecccCCCCCceecCCCce-eehhhHHH
Q 022029 40 FDACCLCLKPFIDPLCCQKGHI-YCKECILE 69 (304)
Q Consensus 40 F~~C~LcL~p~~dPV~t~~G~l-yckEcIle 69 (304)
-..|.+|+....+||..|.||+ ||..||..
T Consensus 295 ~~~C~IC~~~~~~~v~lpCgH~~fC~~C~~~ 325 (345)
T 3t6p_A 295 ERTCKVCMDKEVSVVFIPCGHLVVCQECAPS 325 (345)
T ss_dssp TCBCTTTSSSBCCEEEETTCCEEECTTTGGG
T ss_pred CCCCCccCCcCCceEEcCCCChhHhHHHHhc
Confidence 4679999999999999999999 99999864
No 145
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=88.55 E-value=0.51 Score=35.90 Aligned_cols=52 Identities=21% Similarity=0.414 Sum_probs=41.1
Q ss_pred CceeccCccccccC---CcceEEEccCCccchHHHHHHHhh-cCCCCCCCCCCCCC
Q 022029 210 KSFICPSCKVTLTN---TLSLVALSSCGHVFCKKCADKFMA-VDKVCLVCNKPCKE 261 (304)
Q Consensus 210 ~~~~CPIc~k~~~~---~~~~v~l~~CGhVfc~~Ci~~~~k-~~~~CPvC~~~f~~ 261 (304)
+.-+|-||.+...- ...||+-..|+--+|..|++--.+ .+..||.|...|+.
T Consensus 15 ~~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCktrYkr 70 (93)
T 1weo_A 15 DGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYKR 70 (93)
T ss_dssp SSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCCCC
T ss_pred CCCccccccCccccCCCCCEEEeeeccCChhhHHHHHHHHhccCccccccCCcccc
Confidence 34699999987432 236788889999999999986444 56799999999974
No 146
>2xjy_A Rhombotin-2; oncoprotein, T-cell leukemia, proto-oncogene, transcription, developmental protein; 2.40A {Homo sapiens} PDB: 2xjz_A
Probab=85.77 E-value=0.61 Score=36.89 Aligned_cols=52 Identities=19% Similarity=0.470 Sum_probs=39.0
Q ss_pred CceeccCccccccCC-cceEEEccCCccchHHHHHHHhhcCCCCCCCCCCCCCCC
Q 022029 210 KSFICPSCKVTLTNT-LSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKERN 263 (304)
Q Consensus 210 ~~~~CPIc~k~~~~~-~~~v~l~~CGhVfc~~Ci~~~~k~~~~CPvC~~~f~~~d 263 (304)
.-|.|..|.+.|... ..+ +. .=|.+||..|..++......|..|++++...+
T Consensus 28 ~CF~C~~C~~~L~~~~~~~-~~-~~g~~yC~~~y~~~~~~~~~C~~C~~~I~~~e 80 (131)
T 2xjy_A 28 DCLSCDLCGCRLGEVGRRL-YY-KLGRKLCRRDYLRLFGQDGLCASCDKRIRAYE 80 (131)
T ss_dssp TTCBCTTTCCBCSSTTCCE-EE-ETTEEECHHHHHHHHCCCEECTTTCCEECTTS
T ss_pred HHcccCcCCCccccCCCeE-EE-ECCEEeecCchhhhCCCccChhhcCCccCccc
Confidence 358999999999742 233 33 44999999999987644448999999997644
No 147
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=85.49 E-value=0.55 Score=35.57 Aligned_cols=33 Identities=15% Similarity=0.581 Sum_probs=25.4
Q ss_pred ceeccCcccc-ccCCcceEEEccCCccchHHHHHHH
Q 022029 211 SFICPSCKVT-LTNTLSLVALSSCGHVFCKKCADKF 245 (304)
Q Consensus 211 ~~~CPIc~k~-~~~~~~~v~l~~CGhVfc~~Ci~~~ 245 (304)
...|+||.+. +..++ ..-..|||.||..|+..+
T Consensus 3 e~~C~~C~~~~~~~av--~~C~~C~~~~C~~Cl~~~ 36 (101)
T 2jun_A 3 KVLCQFCDQDPAQDAV--KTCVTCEVSYCDECLKAT 36 (101)
T ss_dssp CCBCTTCCSSSCCBCC--EEETTTTEEECHHHHHHH
T ss_pred CCCCcCCCCCCCCCce--EECCcCChHHhHHHCHHH
Confidence 4789999975 55552 223799999999999984
No 148
>2rgt_A Fusion of LIM/homeobox protein LHX3, linker, INSU enhancer protein ISL-1; protein-protein complex, LIM domain, Zn finger, activator, D binding; 2.05A {Mus musculus} PDB: 3mmk_A
Probab=84.84 E-value=1.9 Score=35.68 Aligned_cols=37 Identities=22% Similarity=0.324 Sum_probs=28.1
Q ss_pred ceeccCccccccCCcceEEEccCCccchHHHHHHHhhc
Q 022029 211 SFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAV 248 (304)
Q Consensus 211 ~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~ 248 (304)
=|.|..|.+.|.....+. +..=|.+||..|..+++..
T Consensus 93 CF~C~~C~~~L~~g~~f~-~~~~g~~~C~~c~~~~~~~ 129 (169)
T 2rgt_A 93 CFACVVCKRQLATGDEFY-LMEDSRLVCKADYETAKQG 129 (169)
T ss_dssp GCBCTTTCCBCCTTCEEE-ECTTSCEEEHHHHHHHHHC
T ss_pred CCcCCCCCCCCCCCCceE-EccCCeEECHHHHHHHhhc
Confidence 489999999997544443 3345899999999998653
No 149
>2jtn_A LIM domain-binding protein 1, LIM/homeobox protein LHX3; intramolecular (fusion) protein-protein complex, protein binding/transcription complex; NMR {Mus musculus}
Probab=83.91 E-value=1.5 Score=36.77 Aligned_cols=35 Identities=20% Similarity=0.345 Sum_probs=26.4
Q ss_pred CceeccCccccccCCcceEEEccCCccchHHHHHHH
Q 022029 210 KSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKF 245 (304)
Q Consensus 210 ~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~ 245 (304)
.-|.|..|.+.|.....+.+ ..=|.+||..|..++
T Consensus 146 ~CF~C~~C~~~L~~g~~f~~-~~~g~~yC~~cy~~~ 180 (182)
T 2jtn_A 146 HCFACVVCKRQLATGDEFYL-MEDSRLVCKADYETA 180 (182)
T ss_dssp TTCCCTTTCCCCCTTCEEEE-CTTSCEECHHHHHHH
T ss_pred CCCcCCCCCCCCCCCCceEE-ccCCEEECHHHHHHh
Confidence 35899999999985444433 334899999999875
No 150
>2xqn_T Testin, TESS; metal-binding protein, cytoskeleton, focal adhesion, acrosom; 2.62A {Homo sapiens}
Probab=81.77 E-value=4 Score=31.77 Aligned_cols=73 Identities=19% Similarity=0.264 Sum_probs=50.9
Q ss_pred ccCCCCCCcCCCCCceeee-cccCCCcccccCCCCCceeccCccccccCCcceEEEccCCccchHHHHHHHhhcCCCCCC
Q 022029 176 TICPEGKEKLKLKSLFPVY-FTEDKSEEKKSSSNDKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLV 254 (304)
Q Consensus 176 ~~CP~sg~~l~lKDLi~l~-f~~~~~~~~~~~~~~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~~~~CPv 254 (304)
++|+.=++++.-.+++... -.+- ..-|.|..|.+.|.+. .+ ...=|.+||..|..++. ..+|..
T Consensus 4 ~~C~~C~~~I~~~~~~~a~~~~~H----------~~CF~C~~C~~~L~~~-~f--~~~~g~~yC~~cy~~~~--~~~C~~ 68 (126)
T 2xqn_T 4 PRCAGCDELIFSNEYTQAENQNWH----------LKHFCCFDCDSILAGE-IY--VMVNDKPVCKPCYVKNH--AVVCQG 68 (126)
T ss_dssp CBBTTTSSBCCSSCEEEETTEEEC----------GGGSBCTTTCCBCTTS-EE--EEETTEEEEHHHHHHHS--CCBCTT
T ss_pred CCCccCCCEeCCceEEeeCCCCcc----------CCCCCcCCCCCCCCcC-EE--EeECCEEechHHhCcCc--CccCcc
Confidence 5787777777755554331 1111 1358999999999875 33 23459999999998864 468999
Q ss_pred CCCCCCCCC
Q 022029 255 CNKPCKERN 263 (304)
Q Consensus 255 C~~~f~~~d 263 (304)
|++++...+
T Consensus 69 C~~~I~~~~ 77 (126)
T 2xqn_T 69 CHNAIDPEV 77 (126)
T ss_dssp TCSBCCTTS
T ss_pred cCCcCCcCc
Confidence 999998643
No 151
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=81.15 E-value=0.093 Score=42.25 Aligned_cols=45 Identities=27% Similarity=0.634 Sum_probs=29.0
Q ss_pred ceeccCccccccCCcceEEEccCCccchHHHHHHHhhcCCCCCCC
Q 022029 211 SFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVC 255 (304)
Q Consensus 211 ~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~~~~CPvC 255 (304)
...|..|...|+-..+----+.||.+||..|....+.....|-.|
T Consensus 19 ~~~C~~C~~~Fs~~~RkHHCR~CG~ifC~~Cs~~~~~~vRVC~~C 63 (120)
T 1y02_A 19 EPSCKSCGAHFANTARKQTCLDCKKNFCMTCSSQVGNGPRLCLLC 63 (120)
T ss_dssp -CCCTTTCCCCSSGGGCEECTTTCCEECGGGEEC----CCEEHHH
T ss_pred cCcccCcCCccccccccccCCCCCCeeCHHHhCCCCCCceECHHH
Confidence 358999999997653333467899999999966543333445444
No 152
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=81.13 E-value=0.67 Score=34.99 Aligned_cols=36 Identities=25% Similarity=0.510 Sum_probs=25.9
Q ss_pred CCceeccCccccccCCcceEEEccCCccchHHHHHH
Q 022029 209 DKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADK 244 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~ 244 (304)
...-.|.+|...|+-..+=---+.||.|||..|...
T Consensus 7 ~~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~ 42 (88)
T 1wfk_A 7 GMESRCYGCAVKFTLFKKEYGCKNCGRAFCNGCLSF 42 (88)
T ss_dssp CCCSBCTTTCCBCCSSSCEEECSSSCCEEETTTSCE
T ss_pred CcCCCCcCcCCcccCccccccCCCCCCEEChhHcCC
Confidence 344589999999876433334578999999988654
No 153
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=80.41 E-value=0.83 Score=33.99 Aligned_cols=34 Identities=26% Similarity=0.650 Sum_probs=25.8
Q ss_pred ceeccCccccccCCcceEEEccCCccchHHHHHH
Q 022029 211 SFICPSCKVTLTNTLSLVALSSCGHVFCKKCADK 244 (304)
Q Consensus 211 ~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~ 244 (304)
...|.+|...|+--.+=---+.||.|||..|...
T Consensus 21 ~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~ 54 (84)
T 1z2q_A 21 APACNGCGCVFTTTVRRHHCRNCGYVLCGDCSRH 54 (84)
T ss_dssp CCBCTTTCCBCCTTSCCEECTTTCCEECTGGGCC
T ss_pred CCCCcCcCCccccchhcccccCCCcEEChHHhCC
Confidence 4589999999976433334578999999998654
No 154
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=79.57 E-value=0.47 Score=29.66 Aligned_cols=15 Identities=40% Similarity=0.910 Sum_probs=13.0
Q ss_pred ceeccCccccccCCc
Q 022029 211 SFICPSCKVTLTNTL 225 (304)
Q Consensus 211 ~~~CPIc~k~~~~~~ 225 (304)
.|+||+|++.|.+..
T Consensus 5 GFiCP~C~~~l~s~~ 19 (34)
T 3mjh_B 5 GFICPQCMKSLGSAD 19 (34)
T ss_dssp EEECTTTCCEESSHH
T ss_pred ccCCcHHHHHcCCHH
Confidence 599999999998863
No 155
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=76.57 E-value=0.81 Score=33.11 Aligned_cols=31 Identities=26% Similarity=0.535 Sum_probs=20.1
Q ss_pred eccCccccccCCcceEEEccCCccchHHHHH
Q 022029 213 ICPSCKVTLTNTLSLVALSSCGHVFCKKCAD 243 (304)
Q Consensus 213 ~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~ 243 (304)
.|.+|...|+--.+----+.||.|||..|..
T Consensus 13 ~C~~C~~~F~~~~RrHHCR~CG~v~C~~Cs~ 43 (73)
T 1vfy_A 13 ACMICSKKFSLLNRKHHCRSCGGVFCQEHSS 43 (73)
T ss_dssp BCTTTCCBCBTTBCCEECTTTCCEECGGGSC
T ss_pred cccCCCCccCCccccccCCCCCEEEcccccC
Confidence 6778887776533222356788888877743
No 156
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=76.50 E-value=0.95 Score=33.51 Aligned_cols=34 Identities=24% Similarity=0.716 Sum_probs=25.6
Q ss_pred ceeccCccccccCCcceEEEccCCccchHHHHHH
Q 022029 211 SFICPSCKVTLTNTLSLVALSSCGHVFCKKCADK 244 (304)
Q Consensus 211 ~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~ 244 (304)
...|.+|...|+-..+=---+.||.|||..|...
T Consensus 19 ~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~ 52 (82)
T 2yw8_A 19 ATHCRQCEKEFSISRRKHHCRNCGHIFCNTCSSN 52 (82)
T ss_dssp CCBCTTTCCBCBTTBCCEECTTTCCEECSGGGCE
T ss_pred CCcccCcCCcccCccccccCCCCCCEEChHHhCC
Confidence 4589999999976433334578999999998654
No 157
>1rut_X Flinc4, fusion protein of LMO4 protein and LIM domain- binding protein 1; B-tandem zipper, protein binding; 1.30A {Mus musculus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3 PDB: 2dfy_X 2xjz_I 2xjy_B
Probab=76.32 E-value=1.1 Score=37.97 Aligned_cols=76 Identities=16% Similarity=0.322 Sum_probs=49.4
Q ss_pred ccCCCCCCcCCCCCceeee-cccCCCcccccCCCCCceeccCccccccC-CcceEEEccCCccchHHHHHHHhhcCCCCC
Q 022029 176 TICPEGKEKLKLKSLFPVY-FTEDKSEEKKSSSNDKSFICPSCKVTLTN-TLSLVALSSCGHVFCKKCADKFMAVDKVCL 253 (304)
Q Consensus 176 ~~CP~sg~~l~lKDLi~l~-f~~~~~~~~~~~~~~~~~~CPIc~k~~~~-~~~~v~l~~CGhVfc~~Ci~~~~k~~~~CP 253 (304)
..|..=++++.-..+|... -.+- ..-|.|..|.+.|.+ ...+ +. .=|.+||..|+.+++.....|.
T Consensus 6 ~~C~~C~~~I~~~~~~~a~~~~wH----------~~CF~C~~C~~~L~~~g~~~-~~-~~g~~yC~~cy~~~~~~~~~C~ 73 (188)
T 1rut_X 6 KRCAGCGGKIADRFLLYAMDSYWH----------SRCLKCSSCQAQLGDIGTSS-YT-KSGMILCRNDYIRLFGNSGACS 73 (188)
T ss_dssp CBBTTTCCBCCCSEEEEETTEEEC----------GGGCBCTTTCCBHHHHCSEE-EE-ETTEEECHHHHHHHHSCCEECT
T ss_pred CcCccCCCEeCCceeEEecCcEec----------ccCcccCCCCcccccCCceE-EE-eCCccccccccccccccCCccc
Confidence 5777777777644333321 1111 135899999999986 2233 33 3499999999998764323799
Q ss_pred CCCCCCCCCC
Q 022029 254 VCNKPCKERN 263 (304)
Q Consensus 254 vC~~~f~~~d 263 (304)
.|++++...+
T Consensus 74 ~C~~~I~~~e 83 (188)
T 1rut_X 74 ACGQSIPASE 83 (188)
T ss_dssp TTCCEECTTS
T ss_pred cCCCccccCc
Confidence 9999887644
No 158
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=75.73 E-value=0.86 Score=34.42 Aligned_cols=33 Identities=33% Similarity=0.713 Sum_probs=22.2
Q ss_pred eeccCccccccCCcceEEEccCCccchHHHHHH
Q 022029 212 FICPSCKVTLTNTLSLVALSSCGHVFCKKCADK 244 (304)
Q Consensus 212 ~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~ 244 (304)
..|.+|...|+-..+=---+.||.|||..|...
T Consensus 21 ~~C~~C~~~F~~~~RrhhCr~CG~v~C~~Cs~~ 53 (90)
T 3t7l_A 21 PNCMNCQVKFTFTKRRHHCRACGKVFCGVCCNR 53 (90)
T ss_dssp CBCTTTCCBCCSSSCCEECTTTCCEECGGGSCE
T ss_pred CcCcCCCCcccchhhCccccCCCCEECCcccCC
Confidence 468888888765433234567888888887554
No 159
>2cup_A Skeletal muscle LIM-protein 1; four and half LIM domains protein 1, LIM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 g.39.1.3
Probab=75.21 E-value=1.9 Score=32.33 Aligned_cols=74 Identities=20% Similarity=0.356 Sum_probs=49.1
Q ss_pred CccCCCCCCcCCC-CCceeee-cccCCCcccccCCCCCceeccCccccccCCcceEEEccCCccchHHHHHHHhhcCCCC
Q 022029 175 STICPEGKEKLKL-KSLFPVY-FTEDKSEEKKSSSNDKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVC 252 (304)
Q Consensus 175 ~~~CP~sg~~l~l-KDLi~l~-f~~~~~~~~~~~~~~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~~~~C 252 (304)
...|+.-++++.. ..+|... -.+- ..=|.|..|.+.|.+. .+ +. .=|.+||..|..+++ ..+|
T Consensus 5 ~~~C~~C~~~I~~~~~~~~a~~~~~H----------~~CF~C~~C~~~L~~~-~~-~~-~~g~~yC~~cy~~~~--~~~C 69 (101)
T 2cup_A 5 SSGCVECRKPIGADSKEVHYKNRFWH----------DTCFRCAKCLHPLANE-TF-VA-KDNKILCNKCTTRED--SPKC 69 (101)
T ss_dssp CCBCSSSCCBCCSSSCEEEETTEEEE----------TTTCCCSSSCCCTTSS-CC-EE-ETTEEECHHHHTTCC--CCBC
T ss_pred CCcCcccCCcccCCceEEEECccChh----------hcCCcccccCCCCCcC-ee-EC-cCCEEEChhHhhhhc--CCcc
Confidence 3578877777764 3333321 0111 1358999999999764 33 23 349999999987753 4689
Q ss_pred CCCCCCCCCCC
Q 022029 253 LVCNKPCKERN 263 (304)
Q Consensus 253 PvC~~~f~~~d 263 (304)
..|++++...+
T Consensus 70 ~~C~~~I~~~~ 80 (101)
T 2cup_A 70 KGCFKAIVAGD 80 (101)
T ss_dssp SSSCCBCCSSS
T ss_pred ccCCCccccCC
Confidence 99999998544
No 160
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=73.62 E-value=0.68 Score=44.00 Aligned_cols=49 Identities=24% Similarity=0.605 Sum_probs=0.0
Q ss_pred ceeccCccccccCCcceEEEccCCccchHHHHHHHhh-------cCCCCCCCCCCC
Q 022029 211 SFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMA-------VDKVCLVCNKPC 259 (304)
Q Consensus 211 ~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k-------~~~~CPvC~~~f 259 (304)
...|++|...|+-..+-..-+.||+|||..|....+. ....|-.|-..+
T Consensus 375 ~~~c~~c~~~f~~~~r~h~Cr~Cg~~~C~~Cs~~~~~~~~~~~~~~rvC~~C~~~l 430 (434)
T 3mpx_A 375 VMMCMNCGCDFSLTLRRHHCHACGKIVCRNCSRNKYPLKYLKDRMAKVCDGCFGEL 430 (434)
T ss_dssp --------------------------------------------------------
T ss_pred CCcCCCcCCCCCCcchhhhcccCcCEeehhhCCCeeeCCCCCCCcCEecHHHHHHH
Confidence 4579999999875433234578999999999875431 224566665544
No 161
>2rgt_A Fusion of LIM/homeobox protein LHX3, linker, INSU enhancer protein ISL-1; protein-protein complex, LIM domain, Zn finger, activator, D binding; 2.05A {Mus musculus} PDB: 3mmk_A
Probab=73.11 E-value=3.4 Score=34.15 Aligned_cols=74 Identities=18% Similarity=0.332 Sum_probs=50.9
Q ss_pred ccCCCCCCcCCCCCceee-ecccCCCcccccCCCCCceeccCccccccCCcceEEEccCCccchHHHHHHHhhcCCCCCC
Q 022029 176 TICPEGKEKLKLKSLFPV-YFTEDKSEEKKSSSNDKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLV 254 (304)
Q Consensus 176 ~~CP~sg~~l~lKDLi~l-~f~~~~~~~~~~~~~~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~~~~CPv 254 (304)
..|..-++++.-..+|.. .-.+- ..-|.|..|.+.|.+.. + .. =|.+||..|+.+++ ..+|..
T Consensus 7 ~~C~~C~~~I~~~~~~~a~~~~wH----------~~CF~C~~C~~~L~~~~-f--~~-~g~~yC~~~y~~~f--~~~C~~ 70 (169)
T 2rgt_A 7 PMCAGCDQHILDRFILKALDRHWH----------SKCLKCSDCHVPLAERC-F--SR-GESVYCKDDFFKRF--GTKCAA 70 (169)
T ss_dssp CBBSSSSSBCCSSSCEECSSCEEC----------TTTSBCTTTCCBCCSCC-E--ES-SSCEECHHHHHHHH--SCBCTT
T ss_pred CccccCCCccCCcEEEEECCcEEc----------cccCccCCCCCcCCCCC-c--cc-CCeeeecccccccc--cccccc
Confidence 578777777765444322 10111 23589999999998863 3 33 49999999998865 357999
Q ss_pred CCCCCCCCCce
Q 022029 255 CNKPCKERNLV 265 (304)
Q Consensus 255 C~~~f~~~diI 265 (304)
|++++...+++
T Consensus 71 C~~~I~~~~~v 81 (169)
T 2rgt_A 71 CQLGIPPTQVV 81 (169)
T ss_dssp TCCBCCTTSEE
T ss_pred cccccCCCcEE
Confidence 99988766544
No 162
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=72.81 E-value=0.89 Score=39.69 Aligned_cols=33 Identities=36% Similarity=0.800 Sum_probs=24.2
Q ss_pred eeccCccccccCCcceEEEccCCccchHHHHHH
Q 022029 212 FICPSCKVTLTNTLSLVALSSCGHVFCKKCADK 244 (304)
Q Consensus 212 ~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~ 244 (304)
..|++|...|+--.+=---+.||+|||..|...
T Consensus 162 ~~C~~C~~~F~~~~rrhhCr~CG~v~C~~Cs~~ 194 (220)
T 1dvp_A 162 RVCHRCRVEFTFTNRKHHCRNCGQVFCGQCTAK 194 (220)
T ss_dssp SBCTTTCCBCCSSSCCEECTTTCCEECSTTSCE
T ss_pred CccCCCCCccCCcccccccCCcCCEEChHHhCC
Confidence 489999999975432233578999999988543
No 163
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=72.21 E-value=1.4 Score=32.76 Aligned_cols=34 Identities=26% Similarity=0.595 Sum_probs=24.7
Q ss_pred ceeccCccccccCCcceEEEccCCccchHHHHHH
Q 022029 211 SFICPSCKVTLTNTLSLVALSSCGHVFCKKCADK 244 (304)
Q Consensus 211 ~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~ 244 (304)
...|.+|...|+--.+=---+.||.|||..|...
T Consensus 14 ~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~ 47 (84)
T 1x4u_A 14 FGNCTGCSATFSVLKKRRSCSNCGNSFCSRCCSF 47 (84)
T ss_dssp CSSCSSSCCCCCSSSCCEECSSSCCEECTTTSCE
T ss_pred CCcCcCcCCccccchhhhhhcCCCcEEChhhcCC
Confidence 4589999999965432223578999999988543
No 164
>2cs3_A Protein C14ORF4, MY039 protein; ZF-C3HC4 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.3
Probab=69.90 E-value=6 Score=29.50 Aligned_cols=39 Identities=26% Similarity=0.538 Sum_probs=31.0
Q ss_pred CCceeccCccccccCCcceEEE-ccCCccchHHHHHHHhhc
Q 022029 209 DKSFICPSCKVTLTNTLSLVAL-SSCGHVFCKKCADKFMAV 248 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~v~l-~~CGhVfc~~Ci~~~~k~ 248 (304)
...+.|.+|.+.+.+. +||-- ..-+|-||..|-+..++.
T Consensus 13 ~a~l~CtlC~erLEdt-HFVQCPsv~~HkFCFpCsr~sIk~ 52 (93)
T 2cs3_A 13 SGPLCCTICHERLEDT-HFVQCPSVPSHKFCFPCSRESIKA 52 (93)
T ss_dssp CCSCCCSSSCSCCSST-TSEECSSCSSCEECHHHHHHHHHH
T ss_pred CCeeEeecchhhhccC-ceeeCCCccCCeeeccccHHHHHh
Confidence 4578999999999885 77642 234899999999999873
No 165
>2jtn_A LIM domain-binding protein 1, LIM/homeobox protein LHX3; intramolecular (fusion) protein-protein complex, protein binding/transcription complex; NMR {Mus musculus}
Probab=68.96 E-value=7.9 Score=32.26 Aligned_cols=76 Identities=16% Similarity=0.303 Sum_probs=52.6
Q ss_pred CCCccCCCCCCcCCCCCceee-ecccCCCcccccCCCCCceeccCccccccCCcceEEEccCCccchHHHHHHHhhcCCC
Q 022029 173 SASTICPEGKEKLKLKSLFPV-YFTEDKSEEKKSSSNDKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKV 251 (304)
Q Consensus 173 ~~~~~CP~sg~~l~lKDLi~l-~f~~~~~~~~~~~~~~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~~~~ 251 (304)
...+.|..-++++.-..++.. .-.+- ..-|.|..|.+.|.+.. + .. =|.+||..|+.+++ ..+
T Consensus 58 ~~~~~C~~C~~~I~~~~~~~a~~~~wH----------~~CF~C~~C~~~L~~~~-f--~~-~g~~yC~~~y~~~f--~~k 121 (182)
T 2jtn_A 58 PEIPMCAGCDQHILDRFILKALDRHWH----------SKCLKCSDCHVPLAERC-F--SR-GESVYCKDDFFKRF--GTK 121 (182)
T ss_dssp CSCCBCBTSSSBCCCSEEEEETTEEEC----------SSTTSCTTTCCCCSSCC-E--EE-TTEEECHHHHHHTT--SCC
T ss_pred CCCCcCccCCCCccCceeEEecCCeEc----------cccCccCCCCCccCCCc-e--eE-CCEeeecCcccccc--ccc
Confidence 345788888888775444332 11111 13589999999998863 3 33 49999999998864 468
Q ss_pred CCCCCCCCCCCCc
Q 022029 252 CLVCNKPCKERNL 264 (304)
Q Consensus 252 CPvC~~~f~~~di 264 (304)
|..|++++...++
T Consensus 122 C~~C~~~I~~~~~ 134 (182)
T 2jtn_A 122 CAACQLGIPPTQV 134 (182)
T ss_dssp CTTTCCCCCSSCC
T ss_pred cccCCCccCCCce
Confidence 9999999976554
No 166
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=68.57 E-value=1.4 Score=38.86 Aligned_cols=32 Identities=31% Similarity=0.786 Sum_probs=23.9
Q ss_pred eccCccccccCCcceEEEccCCccchHHHHHH
Q 022029 213 ICPSCKVTLTNTLSLVALSSCGHVFCKKCADK 244 (304)
Q Consensus 213 ~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~ 244 (304)
.|.+|...|+--.+=---+.||.|||..|...
T Consensus 166 ~C~~C~~~F~~~~RrhHCR~CG~v~C~~Cs~~ 197 (226)
T 3zyq_A 166 ECHRCRVQFGVMTRKHHCRACGQIFCGKCSSK 197 (226)
T ss_dssp BCTTTCCBCBTTBCCEECTTTCCEECTTTCCE
T ss_pred CCcCcCCCCCccccccccCCCcCEeChhhcCC
Confidence 79999998875433334678999999988553
No 167
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=66.56 E-value=1.1 Score=30.48 Aligned_cols=37 Identities=22% Similarity=0.477 Sum_probs=26.6
Q ss_pred CCceeccCccccccCCcceEEEccCCccchHHHHHHHhhcCCCCCCCCCCCCCC
Q 022029 209 DKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKER 262 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~~~~CPvC~~~f~~~ 262 (304)
+..|.|++|.+.|.....+. . .....|++|++.|...
T Consensus 16 ~~~~~C~~C~k~f~~~~~l~---~--------------~~~~~C~~C~~~f~~~ 52 (73)
T 2ctu_A 16 DRSQKCSKCGIIFIRRSTLS---R--------------RKTPMCEKCRKDSCQE 52 (73)
T ss_dssp CSEEECSSSCCEEECCCCCC---C--------------SSSCCCHHHHHTCSCC
T ss_pred CCCeeCCcccchhCCHHHhC---c--------------CCCCCCCCCChhhcCH
Confidence 45699999999998865422 2 3456888898888654
No 168
>2xjy_A Rhombotin-2; oncoprotein, T-cell leukemia, proto-oncogene, transcription, developmental protein; 2.40A {Homo sapiens} PDB: 2xjz_A
Probab=66.53 E-value=6 Score=30.91 Aligned_cols=35 Identities=11% Similarity=0.361 Sum_probs=26.6
Q ss_pred ceeccCccccccCCcceEEEccCCccchHHHHHHHhh
Q 022029 211 SFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMA 247 (304)
Q Consensus 211 ~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k 247 (304)
-|.|..|.+.|.....++. .. |.+||..|..+++.
T Consensus 94 CF~C~~C~~~L~~g~~f~~-~~-~~~~C~~c~~~~~~ 128 (131)
T 2xjy_A 94 CFKCAACQKHFCVGDRYLL-IN-SDIVCEQDIYEWTK 128 (131)
T ss_dssp GCBCTTTCCBCCTTCEEEE-ET-TEEEEGGGHHHHHH
T ss_pred CcccCCCCCCCCCCCEEEE-EC-CEEEcHHHHHHHhh
Confidence 4889999999964445543 33 99999999988764
No 169
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=66.47 E-value=10 Score=24.33 Aligned_cols=39 Identities=18% Similarity=0.303 Sum_probs=26.6
Q ss_pred CCCceeccCccccccCCcceEEEccCCccchHHHHHHHhh------cCCCCCCCCCCCCC
Q 022029 208 NDKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMA------VDKVCLVCNKPCKE 261 (304)
Q Consensus 208 ~~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k------~~~~CPvC~~~f~~ 261 (304)
....|.|++|.+.|..... |...+. ....|++|++.|..
T Consensus 9 ~~k~~~C~~C~k~f~~~~~---------------L~~H~~~~H~~~k~~~C~~C~k~F~~ 53 (54)
T 2eps_A 9 VGKPYICQSCGKGFSRPDH---------------LNGHIKQVHTSERPHKCQVWVSGPSS 53 (54)
T ss_dssp SSCCEECSSSCCEESSHHH---------------HHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred CCCCeECCCCCcccCCHHH---------------HHHHHHHhcCCCCCccCCCCCCCCCC
Confidence 3557999999999977532 222211 34689999999864
No 170
>1b8t_A Protein (CRP1); LIM domain, muscle differentiation, contractIle; NMR {Gallus gallus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3 PDB: 1ibi_A 1qli_A 1cxx_A 1ctl_A 2o13_A
Probab=61.51 E-value=7.8 Score=32.59 Aligned_cols=60 Identities=20% Similarity=0.406 Sum_probs=40.3
Q ss_pred CccCCCCCCcCCCCCceeee-cccCCCcccccCCCCCceeccCccccccCCcceEEEccCCccchHHHHHHHhh
Q 022029 175 STICPEGKEKLKLKSLFPVY-FTEDKSEEKKSSSNDKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMA 247 (304)
Q Consensus 175 ~~~CP~sg~~l~lKDLi~l~-f~~~~~~~~~~~~~~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k 247 (304)
...|..=++++...++|... -.+- ..=|.|..|.+.|.+.. + +.. =|.+||..|+.+++.
T Consensus 7 ~~~C~~C~~~I~~~~~v~a~g~~wH----------~~CF~C~~C~~~L~~~~-~-~~~-~g~~yC~~cy~~~f~ 67 (192)
T 1b8t_A 7 GKKCGVCQKAVYFAEEVQCEGSSFH----------KSCFLCMVCKKNLDSTT-V-AVH-GDEIYCKSCYGKKYG 67 (192)
T ss_dssp CEECTTTCCEECSSCCEEETTEEEC----------TTTCBCTTTCCBCCSSS-E-EEE-TTEEEEHHHHHHHHS
T ss_pred CCcCccCCCeecceeEEEeCCceec----------CCCCcCcccCCcCCCCe-e-Eec-CCEeeChhhhHhhcC
Confidence 36788777777655554321 1111 23589999999998863 3 333 499999999998764
No 171
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=60.13 E-value=3.2 Score=29.98 Aligned_cols=59 Identities=20% Similarity=0.403 Sum_probs=35.0
Q ss_pred CceeccCccccccCCcc-eEEEccCCccchHHHHHHHhhcCCCCCCCCCCCCCCCceEecCCCccccc
Q 022029 210 KSFICPSCKVTLTNTLS-LVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKERNLVNVEKGGTGFAA 276 (304)
Q Consensus 210 ~~~~CPIc~k~~~~~~~-~v~l~~CGhVfc~~Ci~~~~k~~~~CPvC~~~f~~~diI~L~~~gtgfaa 276 (304)
..|.|++|.-++....- ...-.+-|--|- . +-.++.||+|+.+ +++++.+.....||+-
T Consensus 6 ~~y~C~vCGyiYd~~~Gdp~~gi~pGT~f~-----~-lPddw~CP~Cga~--K~~F~~~~~~~sgf~e 65 (70)
T 1dx8_A 6 GKYECEACGYIYEPEKGDKFAGIPPGTPFV-----D-LSDSFMCPACRSP--KNQFKSIKKVIAGFAE 65 (70)
T ss_dssp SCEEETTTCCEECTTTCCTTTTCCSSCCGG-----G-SCTTCBCTTTCCB--GGGEEECCCBCCCSCC
T ss_pred ceEEeCCCCEEEcCCCCCcccCcCCCCchh-----h-CCCCCcCCCCCCC--HHHceEccccCCChhh
Confidence 46999999876653210 000001233331 1 2356899999994 5678888777778875
No 172
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=59.76 E-value=4.7 Score=27.59 Aligned_cols=41 Identities=22% Similarity=0.486 Sum_probs=25.9
Q ss_pred CceeccCccccccCCcceEEEccCCccchHHHHHHHh-hcCCCCCCCCCCCCC
Q 022029 210 KSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFM-AVDKVCLVCNKPCKE 261 (304)
Q Consensus 210 ~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~-k~~~~CPvC~~~f~~ 261 (304)
..|.|++|.+.|.....+. -|. ..-. .....|++|++.|..
T Consensus 3 Kpy~C~~C~k~F~~~~~L~-----~H~------~~Ht~ekp~~C~~C~k~F~~ 44 (60)
T 4gzn_C 3 RPFFCNFCGKTYRDASGLS-----RHR------RAHLGYRPRSCPECGKCFRD 44 (60)
T ss_dssp CCEECTTTCCEESSHHHHH-----HHH------HHHHTCCCEECTTTCCEESS
T ss_pred CCccCCCCCCEeCCHHHHH-----HHH------HHhCCCcCeECCCCCCCcCC
Confidence 4699999999998863211 010 0001 134589999999975
No 173
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=59.62 E-value=5.7 Score=26.82 Aligned_cols=40 Identities=13% Similarity=0.221 Sum_probs=26.9
Q ss_pred CCCceeccCccccccCCcceEEEccCCccchHHHHHHHhh-----cCCCCCCCCCCCCCC
Q 022029 208 NDKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMA-----VDKVCLVCNKPCKER 262 (304)
Q Consensus 208 ~~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k-----~~~~CPvC~~~f~~~ 262 (304)
.+..|.|++|.+.|..... |..-+. ....|++|++.|...
T Consensus 6 ~~~~~~C~~C~k~f~~~~~---------------L~~H~~~H~~~~~~~C~~C~~~f~~~ 50 (70)
T 1x5w_A 6 SGHPEKCSECSYSCSSKAA---------------LRIHERIHCTDRPFKCNYCSFDTKQP 50 (70)
T ss_dssp CCCSEECSSSSCEESSHHH---------------HHHHHGGGCCSCSEECSSSSCEESSH
T ss_pred CCCCeECCCCCcccCCHHH---------------HHHHHHHcCCCCCEeCCCCCCccCCH
Confidence 3567999999999987532 111111 235899999998753
No 174
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=59.18 E-value=2.8 Score=27.03 Aligned_cols=41 Identities=17% Similarity=0.273 Sum_probs=24.4
Q ss_pred CceeccCccccccCCcceEEEccCCccchHHHHHHHh-hcCCCCCCCCCCCCC
Q 022029 210 KSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFM-AVDKVCLVCNKPCKE 261 (304)
Q Consensus 210 ~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~-k~~~~CPvC~~~f~~ 261 (304)
..|.|++|.+.|.....+. .|. .... .....|++|++.|..
T Consensus 3 ~~~~C~~C~~~f~~~~~l~-----~H~------~~h~~~~~~~C~~C~~~f~~ 44 (57)
T 3uk3_C 3 SSRECSYCGKFFRSNYYLN-----IHL------RTHTGEKPYKCEFCEYAAAQ 44 (57)
T ss_dssp --CBCTTTCCBCSCHHHHH-----HHH------HHHHCCCCEECSSSSCEESS
T ss_pred CCccCCCCcchhCChHHHH-----HHH------HHcCCCCCcCCCCCcchhCC
Confidence 4689999999998863211 111 1111 134589999998864
No 175
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=57.66 E-value=5 Score=30.00 Aligned_cols=28 Identities=29% Similarity=0.649 Sum_probs=23.9
Q ss_pred ceecccC-CCCCcee--cCCCceeehhhHHH
Q 022029 42 ACCLCLK-PFIDPLC--CQKGHIYCKECILE 69 (304)
Q Consensus 42 ~C~LcL~-p~~dPV~--t~~G~lyckEcIle 69 (304)
.|.+|+. +..+||. ...|+-||..|+-.
T Consensus 5 ~C~~C~~~~~~~av~~C~~C~~~~C~~Cl~~ 35 (101)
T 2jun_A 5 LCQFCDQDPAQDAVKTCVTCEVSYCDECLKA 35 (101)
T ss_dssp BCTTCCSSSCCBCCEEETTTTEEECHHHHHH
T ss_pred CCcCCCCCCCCCceEECCcCChHHhHHHCHH
Confidence 5999995 5789985 77899999999876
No 176
>2jyp_A Aragonite protein AP7; protein C-terminal fragment, unknown function; NMR {Synthetic}
Probab=57.46 E-value=4.7 Score=24.49 Aligned_cols=15 Identities=40% Similarity=1.145 Sum_probs=11.8
Q ss_pred CCCc-CCCcceecccC
Q 022029 34 KDSI-KPFDACCLCLK 48 (304)
Q Consensus 34 ~ds~-~~F~~C~LcL~ 48 (304)
+.|+ +||.-|+||..
T Consensus 2 rhsfrrpfhecalcys 17 (36)
T 2jyp_A 2 RHSFRRPFHECALCYS 17 (36)
T ss_dssp CSSSTTTTTCCSSSTT
T ss_pred cccccCccchheeEEe
Confidence 3455 78999999975
No 177
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.13 E-value=4.6 Score=29.68 Aligned_cols=45 Identities=22% Similarity=0.417 Sum_probs=27.6
Q ss_pred CCceeccCcccccc-CCcceEEEccCCccchHHHHHHHhhcCCCCCCCCCCCCCC
Q 022029 209 DKSFICPSCKVTLT-NTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKER 262 (304)
Q Consensus 209 ~~~~~CPIc~k~~~-~~~~~v~l~~CGhVfc~~Ci~~~~k~~~~CPvC~~~f~~~ 262 (304)
...|.|++|.+.|. ....+. -|+-...-. .....|++|++.|...
T Consensus 22 ~~~~~C~~C~k~f~~~~~~L~-----~H~~~h~~~----~~~~~C~~C~k~F~~~ 67 (98)
T 2gqj_A 22 RGEAVCPTCNVVTRKTLVGLK-----KHMEVCQKL----QDALKCQHCRKQFKSK 67 (98)
T ss_dssp TSCCCCTTTCCCCSSCSHHHH-----HHHHHHHHH----HHHHSCSSSCCCCSCH
T ss_pred CCCcCCCCCCCChhhhHHHHH-----HHHHHHcCC----CCCEECCCCCCccCCH
Confidence 45799999999998 653211 122111110 1235899999999764
No 178
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=56.29 E-value=1.2 Score=30.24 Aligned_cols=39 Identities=28% Similarity=0.538 Sum_probs=25.5
Q ss_pred CCceeccCccccccCCcceEEEccCCccchHHHHHHHh--hcCCCCCCCCCCCCCC
Q 022029 209 DKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFM--AVDKVCLVCNKPCKER 262 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~--k~~~~CPvC~~~f~~~ 262 (304)
+..|.|++|.+.|..... +..+- .....|++|++.|...
T Consensus 12 ~k~~~C~~C~k~F~~~~~---------------l~~~H~~~k~~~C~~C~k~f~~~ 52 (62)
T 1vd4_A 12 RASFKCPVCSSTFTDLEA---------------NQLFDPMTGTFRCTFCHTEVEED 52 (62)
T ss_dssp SSEEECSSSCCEEEHHHH---------------HHHEETTTTEEBCSSSCCBCEEC
T ss_pred CCCccCCCCCchhccHHH---------------hHhhcCCCCCEECCCCCCccccC
Confidence 457999999999866421 11110 1235899999999643
No 179
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=55.07 E-value=16 Score=22.59 Aligned_cols=17 Identities=18% Similarity=0.475 Sum_probs=14.1
Q ss_pred CCCceeccCccccccCC
Q 022029 208 NDKSFICPSCKVTLTNT 224 (304)
Q Consensus 208 ~~~~~~CPIc~k~~~~~ 224 (304)
....|.|++|.+.|...
T Consensus 9 ~~k~~~C~~C~k~f~~~ 25 (48)
T 2epr_A 9 TRKQVACEICGKIFRDV 25 (48)
T ss_dssp CCCSEEETTTTEEESSH
T ss_pred CCcCeeCCCCCcccCCH
Confidence 35679999999999875
No 180
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=54.54 E-value=7.2 Score=26.51 Aligned_cols=42 Identities=24% Similarity=0.473 Sum_probs=26.2
Q ss_pred CCceeccCccccccCCcceEEEccCCccchHHHHHHHh-hcCCCCCCCCCCCCC
Q 022029 209 DKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFM-AVDKVCLVCNKPCKE 261 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~-k~~~~CPvC~~~f~~ 261 (304)
+..|.|++|.+.|.....+. -|+ .... .....|++|++.|..
T Consensus 12 ~k~~~C~~C~k~f~~~~~L~-----~H~------~~h~~~~~~~C~~C~~~f~~ 54 (72)
T 1x6e_A 12 EKPYGCVECGKAFSRSSILV-----QHQ------RVHTGEKPYKCLECGKAFSQ 54 (72)
T ss_dssp CCCEECSSSCCEESSHHHHH-----HHH------HGGGCSCCEECSSSCCEESS
T ss_pred CCCccCCCCCCccCCHHHHH-----HHH------HhcCCCCCeECCCCCcccCC
Confidence 45799999999998753211 011 0000 134589999999875
No 181
>1h0z_A Serine protease inhibitor kazal-type 5, contains hemofiltrate peptide HF6478, hemofiltrate...; serine proteinase inhibitor; NMR {Homo sapiens} SCOP: g.68.1.2
Probab=54.48 E-value=2.1 Score=30.88 Aligned_cols=24 Identities=17% Similarity=0.260 Sum_probs=20.3
Q ss_pred CCCceecCCCceeehhhHHHHHHH
Q 022029 50 FIDPLCCQKGHIYCKECILECLLS 73 (304)
Q Consensus 50 ~~dPV~t~~G~lyckEcIle~ll~ 73 (304)
--+|||-.||..|.-+|.|-.-.-
T Consensus 29 ~y~PVCGsDGkTY~N~C~lc~a~~ 52 (68)
T 1h0z_A 29 ENDPIQGPDGKVHGNTCSMCEVFF 52 (68)
T ss_dssp CSCCCBCTTSCBCSSHHHHHHHHH
T ss_pred CCCccCCCCCCEeCCHhHHhHHHH
Confidence 569999999999999999865443
No 182
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=54.20 E-value=4.6 Score=27.68 Aligned_cols=42 Identities=19% Similarity=0.451 Sum_probs=26.3
Q ss_pred CCceeccCccccccCCcceEEEccCCccchHHHHHHHh-hcCCCCCCCCCCCCC
Q 022029 209 DKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFM-AVDKVCLVCNKPCKE 261 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~-k~~~~CPvC~~~f~~ 261 (304)
...|.|++|.+.|.....+. -|. .... .....|++|++.|..
T Consensus 15 ~~~~~C~~C~k~f~~~~~l~-----~H~------~~H~~~~~~~C~~C~k~f~~ 57 (74)
T 2lce_A 15 DKPYKCDRCQASFRYKGNLA-----SHK------TVHTGEKPYRCNICGAQFNR 57 (74)
T ss_dssp CCSBCCTTSSCCBSCHHHHH-----HHH------HHHCCCCSEECTTTCCEESC
T ss_pred CCCeECCCCCceeCCHHHHH-----HHH------HHcCCCCCEECCCCCchhCC
Confidence 56799999999998753210 111 0000 123589999999875
No 183
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=53.15 E-value=14 Score=26.73 Aligned_cols=64 Identities=11% Similarity=0.198 Sum_probs=35.7
Q ss_pred ccCCCCCCcCCCCCceeeecccCCCcccccCCCCCceeccCccccccCCcceEEEccCCccchHHHHHHHhh-----cCC
Q 022029 176 TICPEGKEKLKLKSLFPVYFTEDKSEEKKSSSNDKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMA-----VDK 250 (304)
Q Consensus 176 ~~CP~sg~~l~lKDLi~l~f~~~~~~~~~~~~~~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k-----~~~ 250 (304)
-.|+.-+.....+..+..+...- .....|.|++|.+.|..... +..-+. ...
T Consensus 18 ~~C~~C~~~f~~~~~l~~H~~~h--------~~~~~~~C~~C~~~f~~~~~---------------l~~H~~~h~~~~~~ 74 (106)
T 2ee8_A 18 FICKFCGRHFTKSYNLLIHERTH--------TDERPYTCDICHKAFRRQDH---------------LRDHRYIHSKEKPF 74 (106)
T ss_dssp CBCSSSCCBCSSHHHHHHHHHHH--------CCSCCCBCSSSCCBCSCHHH---------------HHHHGGGSCCCCTT
T ss_pred eECCCCCCccCCHHHHHHHHHHc--------CCCCCcCCCCccchhCCHHH---------------HHHHHHHhCCCCCe
Confidence 46776665554444333332211 11345888888888876421 122111 236
Q ss_pred CCCCCCCCCCCC
Q 022029 251 VCLVCNKPCKER 262 (304)
Q Consensus 251 ~CPvC~~~f~~~ 262 (304)
.|++|++.|...
T Consensus 75 ~C~~C~~~f~~~ 86 (106)
T 2ee8_A 75 KCQECGKGFCQS 86 (106)
T ss_dssp SCSSSCCCCSSH
T ss_pred ECCCcCCcccCH
Confidence 899999999753
No 184
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.49 E-value=8.6 Score=27.84 Aligned_cols=36 Identities=19% Similarity=0.459 Sum_probs=29.7
Q ss_pred CCcceecccCCCCCceecC-CCceeehhhHHHHHHHh
Q 022029 39 PFDACCLCLKPFIDPLCCQ-KGHIYCKECILECLLSQ 74 (304)
Q Consensus 39 ~F~~C~LcL~p~~dPV~t~-~G~lyckEcIle~ll~q 74 (304)
..+-|++|...+..=+-|+ -||.|-..||..||-++
T Consensus 14 ~i~~C~IC~~~i~~g~~C~~C~h~fH~~Ci~kWl~~~ 50 (74)
T 2ct0_A 14 AVKICNICHSLLIQGQSCETCGIRMHLPCVAKYFQSN 50 (74)
T ss_dssp SSCBCSSSCCBCSSSEECSSSCCEECHHHHHHHSTTC
T ss_pred CCCcCcchhhHcccCCccCCCCchhhHHHHHHHHHhc
Confidence 4688999999997556554 59999999999999654
No 185
>1x61_A Thyroid receptor interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=50.41 E-value=19 Score=24.76 Aligned_cols=34 Identities=18% Similarity=0.584 Sum_probs=26.5
Q ss_pred ceeccCccccccCCcceEEEccCCccchHHHHHHHhh
Q 022029 211 SFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMA 247 (304)
Q Consensus 211 ~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k 247 (304)
=|.|..|.+.|.+. .+ +. .=|.+||..|..+++.
T Consensus 33 CF~C~~C~~~L~~~-~~-~~-~~~~~yC~~cy~~~~~ 66 (72)
T 1x61_A 33 CFVCSTCRAQLRGQ-HF-YA-VERRAYCEGCYVATLE 66 (72)
T ss_dssp TCBCSSSCCBCTTS-CE-EE-SSSCEEEHHHHHHHHH
T ss_pred CCcccccCCcCCcC-cC-Ee-eCCeEECHHHHHHHHc
Confidence 58999999999654 33 23 3499999999998774
No 186
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=49.60 E-value=12 Score=26.05 Aligned_cols=43 Identities=28% Similarity=0.614 Sum_probs=31.8
Q ss_pred eeccCccccccCCcceEEEccCCccchHHHHHHHhhc-CCCCCCCC
Q 022029 212 FICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAV-DKVCLVCN 256 (304)
Q Consensus 212 ~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~-~~~CPvC~ 256 (304)
..|-.|...|.+... ..-..|+++||.+| +.++.. -..||-|.
T Consensus 16 ~~C~~C~~~~~~~~~-y~C~~C~~~FC~dC-D~fiHe~Lh~CPgC~ 59 (59)
T 1z60_A 16 RFCYGCQGELKDQHV-YVCAVCQNVFCVDC-DVFVHDSLHSCPGCI 59 (59)
T ss_dssp CEETTTTEECTTSEE-ECCTTTTCCBCHHH-HHTTTTTSCSSSTTC
T ss_pred CcccccCcccCCCcc-EECCccCcCcccch-hHHHHhhccCCcCCC
Confidence 469999999976532 23578999999999 666653 35899873
No 187
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=49.18 E-value=7.9 Score=28.63 Aligned_cols=43 Identities=21% Similarity=0.390 Sum_probs=26.8
Q ss_pred CCceeccCccccc-cCCcceEEEccCCccchHHHHHHHhhcCCCCCCCCCCCCCC
Q 022029 209 DKSFICPSCKVTL-TNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKER 262 (304)
Q Consensus 209 ~~~~~CPIc~k~~-~~~~~~v~l~~CGhVfc~~Ci~~~~k~~~~CPvC~~~f~~~ 262 (304)
...|.|++|.+.| .....+. -|. ...-.....|.+|++.|...
T Consensus 32 ~~~~~C~~C~k~F~~~~~~L~-----~H~------~~h~~k~~~C~~Cgk~F~~~ 75 (96)
T 2ctd_A 32 KGSVSCPTCQAVGRKTIEGLK-----KHM------ENCKQEMFTCHHCGKQLRSL 75 (96)
T ss_dssp TSCEECTTTCSCEESSHHHHH-----HHH------HHHCCCCCCCSSSCCCCSSH
T ss_pred CCCcCCCCCCCCcccCHHHHH-----HHH------HHHCCCCeECCCCCCeeCCH
Confidence 3469999999999 7753211 111 00012346899999999753
No 188
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=49.17 E-value=15 Score=34.99 Aligned_cols=44 Identities=23% Similarity=0.646 Sum_probs=33.2
Q ss_pred ceeccCccccccCCcceEEEc--cCCccchHHHHHHHhh----------cCCCCCCCCCC
Q 022029 211 SFICPSCKVTLTNTLSLVALS--SCGHVFCKKCADKFMA----------VDKVCLVCNKP 258 (304)
Q Consensus 211 ~~~CPIc~k~~~~~~~~v~l~--~CGhVfc~~Ci~~~~k----------~~~~CPvC~~~ 258 (304)
...|-+|... ..++.-. .|..+||..||+.++- ..|.|.+|.-.
T Consensus 93 ~~yCr~C~~G----g~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p~ 148 (386)
T 2pv0_B 93 QSYCSICCSG----ETLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLPS 148 (386)
T ss_dssp BCSCTTTCCC----SSCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSSC
T ss_pred cccceEcCCC----CeEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEcCCc
Confidence 4678888863 2345555 8999999999998862 35899999854
No 189
>1x6a_A LIMK-2, LIM domain kinase 2; LIM-kinase 2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=47.94 E-value=32 Score=24.16 Aligned_cols=37 Identities=27% Similarity=0.692 Sum_probs=27.5
Q ss_pred CceeccCccccccCCcceEEEccCCccchHHHHHHHhh
Q 022029 210 KSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMA 247 (304)
Q Consensus 210 ~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k 247 (304)
.-|.|..|.+.|.....++ +..=|.+||..|..+++.
T Consensus 40 ~CF~C~~C~~~L~~g~~f~-~~~~~~~~C~~c~~~~~~ 76 (81)
T 1x6a_A 40 ECFACMSCKVIIEDGDAYA-LVQHATLYCGKCHNEVVS 76 (81)
T ss_dssp TSCBCTTTCCBCCTTSCEE-ECSSSCEEEHHHHHHHHC
T ss_pred ccCCccCCCCccCCCCcEE-EeeCCEEECHHHHHHHhc
Confidence 3589999999997643443 224589999999988764
No 190
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=47.68 E-value=13 Score=26.53 Aligned_cols=31 Identities=32% Similarity=0.889 Sum_probs=24.0
Q ss_pred CCCcceecccCCCCCceecC--CCceeehhhHHHH
Q 022029 38 KPFDACCLCLKPFIDPLCCQ--KGHIYCKECILEC 70 (304)
Q Consensus 38 ~~F~~C~LcL~p~~dPV~t~--~G~lyckEcIle~ 70 (304)
-.+-+|.||+.-|. +-|. +|.|||.-|--|.
T Consensus 6 ee~pWC~ICneDAt--lrC~gCdgDLYC~rC~rE~ 38 (67)
T 2d8v_A 6 SGLPWCCICNEDAT--LRCAGCDGDLYCARCFREG 38 (67)
T ss_dssp CCCSSCTTTCSCCC--EEETTTTSEEECSSHHHHH
T ss_pred cCCCeeEEeCCCCe--EEecCCCCceehHHHHHHH
Confidence 45678999998866 4333 6999999998775
No 191
>1x64_A Alpha-actinin-2 associated LIM protein; LIM domain, PDZ and LIM domain 3, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=47.22 E-value=64 Score=23.10 Aligned_cols=63 Identities=13% Similarity=0.335 Sum_probs=39.2
Q ss_pred CCCCCccCCCCCCcCCCCCceee-ecccCCCcccccCCCCCceeccCccccccCCcceEEEccCCccchHHHHHHHhh
Q 022029 171 APSASTICPEGKEKLKLKSLFPV-YFTEDKSEEKKSSSNDKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMA 247 (304)
Q Consensus 171 kp~~~~~CP~sg~~l~lKDLi~l-~f~~~~~~~~~~~~~~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k 247 (304)
.+.....|..-++++.- ..|.. .-.+- ..-|.|..|.+.|.+.. ++ .. =|.+||..|+.+++.
T Consensus 21 ~~~~~~~C~~C~~~I~~-~~~~a~~~~~H----------~~CF~C~~C~~~L~~~~-~~-~~-~g~~yC~~~y~~~f~ 84 (89)
T 1x64_A 21 SAQRMPLCDKCGSGIVG-AVVKARDKYRH----------PECFVCADCNLNLKQKG-YF-FV-EGELYCETHARARTS 84 (89)
T ss_dssp CCCSCCBCTTTCCBCCS-CCEESSSCEEC----------TTTCCCSSSCCCTTTSC-CE-EE-TTEEECHHHHHHHSS
T ss_pred CCCcCCCcccCCCEecc-cEEEECCceEC----------ccCCEecCCCCCCCCCC-eE-eE-CCEEECHHHHHHHhC
Confidence 34455788877776663 22211 10111 23588999999998753 33 23 489999999988754
No 192
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: e.59.1.1
Probab=47.00 E-value=2.1 Score=39.70 Aligned_cols=24 Identities=25% Similarity=0.542 Sum_probs=14.8
Q ss_pred ccchHHHHHHHhhcCCCCCCCCCC
Q 022029 235 HVFCKKCADKFMAVDKVCLVCNKP 258 (304)
Q Consensus 235 hVfc~~Ci~~~~k~~~~CPvC~~~ 258 (304)
+.+|.-|-.+|--....||.|+..
T Consensus 208 ~l~Cs~C~t~W~~~R~~C~~Cg~~ 231 (309)
T 2fiy_A 208 YLSCSLCACEWHYVRIKCSHCEES 231 (309)
T ss_dssp EEEETTTCCEEECCTTSCSSSCCC
T ss_pred EEEeCCCCCEEeecCcCCcCCCCC
Confidence 345555544443345689999986
No 193
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=46.93 E-value=11 Score=25.83 Aligned_cols=35 Identities=14% Similarity=0.286 Sum_probs=27.8
Q ss_pred CcceecccCCCCCceecCC---C--ceeehhhHHHHHHHh
Q 022029 40 FDACCLCLKPFIDPLCCQK---G--HIYCKECILECLLSQ 74 (304)
Q Consensus 40 F~~C~LcL~p~~dPV~t~~---G--~lyckEcIle~ll~q 74 (304)
-+.|++|+....+|++.|- | ..|-.+|+..||...
T Consensus 6 ~~~CrIC~~~~~~~l~~PC~C~gs~~~~H~~Cl~~W~~~~ 45 (60)
T 1vyx_A 6 VPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTIS 45 (60)
T ss_dssp CCEETTTTEECSCCCCCSCCCSSGGGSCCHHHHHHHHHHH
T ss_pred CCEeEEeecCCCCceecCcCCCCchhhhHHHHHHHHHHhC
Confidence 4789999988777777772 3 489999999999753
No 194
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=46.34 E-value=14 Score=26.11 Aligned_cols=53 Identities=19% Similarity=0.402 Sum_probs=30.2
Q ss_pred CCceeccCccccccCCcce------------EEEccCCccchHHH-HHHHhh-------cCCCCCCCCCCCCC
Q 022029 209 DKSFICPSCKVTLTNTLSL------------VALSSCGHVFCKKC-ADKFMA-------VDKVCLVCNKPCKE 261 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~------------v~l~~CGhVfc~~C-i~~~~k-------~~~~CPvC~~~f~~ 261 (304)
...|.|++|.+.|.....+ ..-..||-.|...- +..-+. ....|++|++.|..
T Consensus 5 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~ 77 (95)
T 2yt9_A 5 SSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSR 77 (95)
T ss_dssp CSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSS
T ss_pred CCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCC
Confidence 4578999999998764311 11224666664322 222221 12478888888764
No 195
>1iml_A CRIP, cysteine rich intestinal protein; metal-binding protein, LIM domain protein; NMR {Rattus rattus} SCOP: g.39.1.3 g.39.1.3
Probab=45.39 E-value=15 Score=25.69 Aligned_cols=44 Identities=18% Similarity=0.342 Sum_probs=33.1
Q ss_pred ceeccCccccccCCcceEEEccCCccchH-HHHHHHhhcCCCCCCCCCCC
Q 022029 211 SFICPSCKVTLTNTLSLVALSSCGHVFCK-KCADKFMAVDKVCLVCNKPC 259 (304)
Q Consensus 211 ~~~CPIc~k~~~~~~~~v~l~~CGhVfc~-~Ci~~~~k~~~~CPvC~~~f 259 (304)
-|.|..|.+.|.+. .+. . .=|.+||. .|..+++ ..+|..|+...
T Consensus 27 CF~C~~C~~~L~~~-~~~-~-~~g~~yC~~~cy~~~f--~~~C~~C~~~~ 71 (76)
T 1iml_A 27 CLKCEKCGKTLTSG-GHA-E-HEGKPYCNHPCYSAMF--GPKGFGRGGAE 71 (76)
T ss_dssp TCBCTTTCCBCCTT-TEE-E-ETTEEEETTTHHHHHS--SCCCSSCCCSS
T ss_pred CCCccccCccCCCC-ceE-C-cCCeEeeCHHHHHHHh--CccCCCcCCce
Confidence 58999999999886 333 3 34899999 6998864 45788888543
No 196
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=45.21 E-value=8.7 Score=32.24 Aligned_cols=12 Identities=50% Similarity=1.088 Sum_probs=8.6
Q ss_pred CceeccCccccc
Q 022029 210 KSFICPSCKVTL 221 (304)
Q Consensus 210 ~~~~CPIc~k~~ 221 (304)
..|+|++|.-+.
T Consensus 137 ~~~~C~~CG~i~ 148 (170)
T 3pwf_A 137 KVYICPICGYTA 148 (170)
T ss_dssp CEEECTTTCCEE
T ss_pred CeeEeCCCCCee
Confidence 468888887654
No 197
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=44.80 E-value=7.6 Score=33.47 Aligned_cols=13 Identities=31% Similarity=0.700 Sum_probs=9.7
Q ss_pred CceeccCcccccc
Q 022029 210 KSFICPSCKVTLT 222 (304)
Q Consensus 210 ~~~~CPIc~k~~~ 222 (304)
..|.|++|.-++.
T Consensus 170 ~~~~C~~CG~i~~ 182 (202)
T 1yuz_A 170 KFHLCPICGYIHK 182 (202)
T ss_dssp CEEECSSSCCEEE
T ss_pred cEEEECCCCCEEc
Confidence 4789999887653
No 198
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=44.76 E-value=12 Score=27.85 Aligned_cols=16 Identities=19% Similarity=0.650 Sum_probs=12.0
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
...|.|++|.+.|...
T Consensus 5 ~~~~~C~~C~~~f~~~ 20 (124)
T 2dlq_A 5 SSGVECPTCHKKFLSK 20 (124)
T ss_dssp CSSCCCTTTCCCCSSH
T ss_pred CCCCCCCCCCCcCCCH
Confidence 4568888888888664
No 199
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=42.47 E-value=26 Score=29.22 Aligned_cols=43 Identities=21% Similarity=0.576 Sum_probs=31.5
Q ss_pred ceeccCccccccCCcceEEEc--cCCccchHHHHHHHhh----------cCCCCCCCCC
Q 022029 211 SFICPSCKVTLTNTLSLVALS--SCGHVFCKKCADKFMA----------VDKVCLVCNK 257 (304)
Q Consensus 211 ~~~CPIc~k~~~~~~~~v~l~--~CGhVfc~~Ci~~~~k----------~~~~CPvC~~ 257 (304)
...|-+|... ..++.-. .|-.+||.+||+.++- ..|.|.+|.-
T Consensus 79 ~~yC~wC~~G----g~l~~Cdn~~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~P 133 (159)
T 3a1b_A 79 QSYCTICCGG----REVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGH 133 (159)
T ss_dssp BSSCTTTSCC----SEEEECSSTTTCCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTTCS
T ss_pred cceeeEecCC----CeEEeeCCCCCCCchhHHHHHHhcCHhHHHHHhccCCCEEEecCC
Confidence 4578888863 2334444 6899999999998863 2489999985
No 200
>3pis_D Kazal-type serine protease inhibitor SPI-1; typical non-classical kazal type inhibitor fold; 2.00A {Carcinoscorpius rotundicauda}
Probab=41.69 E-value=14 Score=23.85 Aligned_cols=20 Identities=35% Similarity=0.883 Sum_probs=18.1
Q ss_pred CCceecCCCceeehhhHHHH
Q 022029 51 IDPLCCQKGHIYCKECILEC 70 (304)
Q Consensus 51 ~dPV~t~~G~lyckEcIle~ 70 (304)
-+|||-.+|.-|.-+|.|..
T Consensus 7 ~~PVCGsDG~TY~N~C~l~~ 26 (42)
T 3pis_D 7 YKPVCGANGEVYDNECFLNK 26 (42)
T ss_dssp CCCEEBTTSCEESSHHHHHH
T ss_pred CCceECCCCCEEccHhHHHH
Confidence 47999999999999999875
No 201
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=41.32 E-value=8.7 Score=29.93 Aligned_cols=30 Identities=23% Similarity=0.498 Sum_probs=19.2
Q ss_pred EccCCccchHHHHHHHhhcCCCCCCCCCCCCCCCc
Q 022029 230 LSSCGHVFCKKCADKFMAVDKVCLVCNKPCKERNL 264 (304)
Q Consensus 230 l~~CGhVfc~~Ci~~~~k~~~~CPvC~~~f~~~di 264 (304)
-+.||++|+ +. +.....||.|+..--..-.
T Consensus 70 C~~CG~~F~----~~-~~kPsrCP~CkSe~Ie~P~ 99 (105)
T 2gmg_A 70 CRKCGFVFK----AE-INIPSRCPKCKSEWIEEPR 99 (105)
T ss_dssp BTTTCCBCC----CC-SSCCSSCSSSCCCCBCCCC
T ss_pred hhhCcCeec----cc-CCCCCCCcCCCCCccCCcc
Confidence 357899982 22 3345799999976644333
No 202
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=41.21 E-value=16 Score=28.16 Aligned_cols=31 Identities=19% Similarity=0.388 Sum_probs=26.2
Q ss_pred cceecccCCCC-CceecCCCceeehhhHHHHH
Q 022029 41 DACCLCLKPFI-DPLCCQKGHIYCKECILECL 71 (304)
Q Consensus 41 ~~C~LcL~p~~-dPV~t~~G~lyckEcIle~l 71 (304)
..|-.|..|+. -...-|-+|+||-.|+..+.
T Consensus 2 hfC~~C~~Pi~iygRmIPCkHvFCydCa~~~~ 33 (101)
T 3vk6_A 2 HFCDKCGLPIKVYGRMIPCKHVFCYDCAILHE 33 (101)
T ss_dssp CBCTTTCSBCSEEEEEETTCCEEEHHHHHHHH
T ss_pred eecCccCCCeEEEeeeccccccHHHHHHHHHH
Confidence 46888999976 55589999999999999875
No 203
>2dar_A PDZ and LIM domain protein 5; enigma homolog protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=40.44 E-value=37 Score=24.50 Aligned_cols=60 Identities=22% Similarity=0.518 Sum_probs=37.0
Q ss_pred CCccCCCCCCcCCCCCcee-eecccCCCcccccCCCCCceeccCccccccCCcceEEEccCCccchHHHHHHHhh
Q 022029 174 ASTICPEGKEKLKLKSLFP-VYFTEDKSEEKKSSSNDKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMA 247 (304)
Q Consensus 174 ~~~~CP~sg~~l~lKDLi~-l~f~~~~~~~~~~~~~~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k 247 (304)
...+|+.-++++.- ..|. +.-.+- ..-|.|..|.+.|.+. .++ . .=|.+||..|+.+++.
T Consensus 24 ~~~~C~~C~~~I~~-~~v~a~~~~~H----------~~CF~C~~C~~~L~~~-~f~-~-~~g~~yC~~cy~~~f~ 84 (90)
T 2dar_A 24 RTPMCAHCNQVIRG-PFLVALGKSWH----------PEEFNCAHCKNTMAYI-GFV-E-EKGALYCELCYEKFFA 84 (90)
T ss_dssp CCCBBSSSCCBCCS-CEEEETTEEEC----------TTTCBCSSSCCBCSSS-CBE-E-SSSCEECHHHHHHHTS
T ss_pred CCCCCccCCCEecc-eEEEECCcccc----------ccCCccCCCCCCCCCC-EeE-e-ECCEEECHHHHHHHcC
Confidence 45678877777742 2221 111111 2358899999998865 332 3 4488999999888653
No 204
>1j2o_A FLIN2, fusion of rhombotin-2 and LIM domain-binding protein 1; LIM-interaction-domain (LID), metal binding protein; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=40.26 E-value=37 Score=25.80 Aligned_cols=62 Identities=11% Similarity=0.228 Sum_probs=38.6
Q ss_pred ccCCCCCCcCCCCCceeee-cccCCCcccccCCCCCceeccCccccccCC-cceEEEccCCccchHHHHHHHhhcC
Q 022029 176 TICPEGKEKLKLKSLFPVY-FTEDKSEEKKSSSNDKSFICPSCKVTLTNT-LSLVALSSCGHVFCKKCADKFMAVD 249 (304)
Q Consensus 176 ~~CP~sg~~l~lKDLi~l~-f~~~~~~~~~~~~~~~~~~CPIc~k~~~~~-~~~v~l~~CGhVfc~~Ci~~~~k~~ 249 (304)
++|+.-++++.-..+|... -.+- ..=|.|..|.+.|.+. ..+ +. .=|.+||..|..+++.+.
T Consensus 4 ~~C~~C~~~I~~~~~~~a~~~~wH----------~~CF~C~~C~~~L~~~g~~~-~~-~~g~~yC~~~y~~~f~~~ 67 (114)
T 1j2o_A 4 LTCGGCQQNIGDRYFLKAIDQYWH----------EDCLSCDLCGCRLGEVGRRL-YY-KLGRKLCRRDYLRLGGSG 67 (114)
T ss_dssp BCBSSSCSCBCSSEEEECSSSEEC----------TTTCCCSSSCSCCCCSSSCC-CC-BTTBCCCHHHHHHHHTSC
T ss_pred CCCcCCCCeeCCcEEEEECchhHH----------HhcCcccccCCchhcCCCee-EE-ECCeeechHHHHHHhCcc
Confidence 5677777776644333321 0111 1358999999999752 233 23 349999999999987543
No 205
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=40.02 E-value=14 Score=20.96 Aligned_cols=16 Identities=25% Similarity=0.557 Sum_probs=13.2
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 7 ~k~~~C~~C~k~f~~~ 22 (36)
T 2els_A 7 GKIFTCEYCNKVFKFK 22 (36)
T ss_dssp CCCEECTTTCCEESSH
T ss_pred CCCEECCCCCceeCCH
Confidence 4579999999999775
No 206
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=39.70 E-value=1.8 Score=33.43 Aligned_cols=60 Identities=25% Similarity=0.703 Sum_probs=39.1
Q ss_pred eeccCccccccCCcceEEEccCCccchHHHHHHHhhcCCCCCCCCCCCCCCCceEecCCC-cccc-ccCCeeeeee
Q 022029 212 FICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKERNLVNVEKGG-TGFA-AHGDRLEARD 285 (304)
Q Consensus 212 ~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~~~~CPvC~~~f~~~diI~L~~~g-tgfa-a~g~~~eak~ 285 (304)
..||+|..++.- .-|+.+|..|-..+ .....||.|+.++. .|+.=| .+|- .+|..|.+|+
T Consensus 33 ~~CP~Cq~eL~~--------~g~~~hC~~C~~~f-~~~a~CPdC~q~Le-----vLkACGAvdYFC~~chgLiSKk 94 (101)
T 2jne_A 33 LHCPQCQHVLDQ--------DNGHARCRSCGEFI-EMKALCPDCHQPLQ-----VLKACGAVDYFCQHGHGLISKK 94 (101)
T ss_dssp CBCSSSCSBEEE--------ETTEEEETTTCCEE-EEEEECTTTCSBCE-----EEEETTEEEEEETTTTEEECTT
T ss_pred ccCccCCCccee--------cCCEEECccccchh-hccccCcchhhHHH-----HHHHhcCcchhhccCCceeecc
Confidence 689999987643 22455577775543 34568999999875 355444 4554 5666777765
No 207
>2cs3_A Protein C14ORF4, MY039 protein; ZF-C3HC4 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.3
Probab=39.42 E-value=30 Score=25.74 Aligned_cols=36 Identities=25% Similarity=0.584 Sum_probs=30.9
Q ss_pred CcceecccCCCCCc--eecCC--CceeehhhHHHHHHHhh
Q 022029 40 FDACCLCLKPFIDP--LCCQK--GHIYCKECILECLLSQK 75 (304)
Q Consensus 40 F~~C~LcL~p~~dP--V~t~~--G~lyckEcIle~ll~qk 75 (304)
--.|-||-..++|- |-||. +|-||--|--++|-.|.
T Consensus 15 ~l~CtlC~erLEdtHFVQCPsv~~HkFCFpCsr~sIk~q~ 54 (93)
T 2cs3_A 15 PLCCTICHERLEDTHFVQCPSVPSHKFCFPCSRESIKAQG 54 (93)
T ss_dssp SCCCSSSCSCCSSTTSEECSSCSSCEECHHHHHHHHHHHH
T ss_pred eeEeecchhhhccCceeeCCCccCCeeeccccHHHHHhcC
Confidence 46899999999876 77885 99999999999997664
No 208
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=39.06 E-value=1.5 Score=32.80 Aligned_cols=49 Identities=22% Similarity=0.389 Sum_probs=30.0
Q ss_pred ccCCCCCCcCCCCCceeeecccCCCcc------cccC-CCCCceeccCccccccCC
Q 022029 176 TICPEGKEKLKLKSLFPVYFTEDKSEE------KKSS-SNDKSFICPSCKVTLTNT 224 (304)
Q Consensus 176 ~~CP~sg~~l~lKDLi~l~f~~~~~~~------~~~~-~~~~~~~CPIc~k~~~~~ 224 (304)
..||+-|.+|+-.+||.--++.....+ .=+. -.+--|.||+|.+.|-+.
T Consensus 9 ~~~PlCG~~L~W~eLIeQML~~en~~ei~kDr~~Fl~~~e~F~FkCP~CgEEFyG~ 64 (95)
T 2k5c_A 9 AKCPICGSPLKWEELIEEMLIIENFEEIVKDRERFLAQVEEFVFKCPVCGEEFYGK 64 (95)
T ss_dssp EECSSSCCEECHHHHHHHSTTCSTHHHHTTCHHHHHHHHHHSEEECTTTCCEEETT
T ss_pred ccCCcCCCccCHHHHHHHHHhhccHHHHHhhHHHHHHHHHHHhhcCCCccHHHhcc
Confidence 479999999999999974443322110 0000 012347888888888664
No 209
>2kpi_A Uncharacterized protein SCO3027; zinc finger, PSI-2, NESG, all beta, structural genomics, protein structure initiative; NMR {Streptomyces coelicolor}
Probab=38.62 E-value=11 Score=25.79 Aligned_cols=13 Identities=31% Similarity=0.948 Sum_probs=9.2
Q ss_pred CceeccCcccccc
Q 022029 210 KSFICPSCKVTLT 222 (304)
Q Consensus 210 ~~~~CPIc~k~~~ 222 (304)
..+.||+|+..+.
T Consensus 9 ~iL~CP~c~~~L~ 21 (56)
T 2kpi_A 9 EILACPACHAPLE 21 (56)
T ss_dssp TSCCCSSSCSCEE
T ss_pred hheeCCCCCCcce
Confidence 4578888887653
No 210
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=37.98 E-value=20 Score=28.18 Aligned_cols=53 Identities=25% Similarity=0.335 Sum_probs=31.9
Q ss_pred CceeccCccccccCCcc------------eEEEccCCccchHHH-HHHHhh-----cCCCCCCCCCCCCCC
Q 022029 210 KSFICPSCKVTLTNTLS------------LVALSSCGHVFCKKC-ADKFMA-----VDKVCLVCNKPCKER 262 (304)
Q Consensus 210 ~~~~CPIc~k~~~~~~~------------~v~l~~CGhVfc~~C-i~~~~k-----~~~~CPvC~~~f~~~ 262 (304)
..|.|++|.+.|..... ...-..||-.|...- |..-+. ....|++|++.|...
T Consensus 21 k~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~ 91 (133)
T 2lt7_A 21 VYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINY 91 (133)
T ss_dssp EEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSH
T ss_pred cCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCH
Confidence 45889999988876431 111234777775432 322222 235899999998753
No 211
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=37.59 E-value=29 Score=25.18 Aligned_cols=16 Identities=19% Similarity=0.625 Sum_probs=12.7
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 14 ~~~~~C~~C~~~f~~~ 29 (107)
T 1wjp_A 14 KEVYQCRLCNAKLSSL 29 (107)
T ss_dssp CCCCBCTTTCCBCSSH
T ss_pred CcCeECCCCCCccCCH
Confidence 4568999999998775
No 212
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=37.54 E-value=2.1 Score=28.58 Aligned_cols=12 Identities=17% Similarity=0.301 Sum_probs=8.4
Q ss_pred cCCCCCCCCCCC
Q 022029 248 VDKVCLVCNKPC 259 (304)
Q Consensus 248 ~~~~CPvC~~~f 259 (304)
+.-+||.||-.+
T Consensus 22 P~IrCpyCGyri 33 (48)
T 4ayb_P 22 PGVRCPYCGYKI 33 (48)
T ss_dssp SSSCCTTTCCSC
T ss_pred CCcccCccCcEE
Confidence 556899988543
No 213
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.37 E-value=17 Score=20.43 Aligned_cols=16 Identities=19% Similarity=0.600 Sum_probs=12.8
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 7 ~~~~~C~~C~k~f~~~ 22 (36)
T 2elr_A 7 GKTHLCDMCGKKFKSK 22 (36)
T ss_dssp CSSCBCTTTCCBCSSH
T ss_pred CCCeecCcCCCCcCch
Confidence 4568999999988775
No 214
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=36.90 E-value=20 Score=23.39 Aligned_cols=9 Identities=33% Similarity=1.180 Sum_probs=6.0
Q ss_pred ceeccCccc
Q 022029 211 SFICPSCKV 219 (304)
Q Consensus 211 ~~~CPIc~k 219 (304)
.+.||.|..
T Consensus 5 ~~~CP~C~~ 13 (50)
T 1pft_A 5 QKVCPACES 13 (50)
T ss_dssp CCSCTTTSC
T ss_pred cEeCcCCCC
Confidence 456777755
No 215
>2l3k_A Rhombotin-2, linker, LIM domain-binding protein 1; LMO2(LIM2)-LDB1(LID), chimera, fusion protein, oncoprotein; NMR {Mus musculus} PDB: 2l6y_B 2l6z_C
Probab=36.61 E-value=28 Score=26.87 Aligned_cols=52 Identities=10% Similarity=0.231 Sum_probs=33.4
Q ss_pred CceeccCccccccCCcceEEEccCCccchHHHHHHHhhcCCCCCCCCCCCCCCCce
Q 022029 210 KSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKERNLV 265 (304)
Q Consensus 210 ~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~~~~CPvC~~~f~~~diI 265 (304)
.-|.|..|.+.|.....++ +. =|.+||..|..+++.. .|..|+......|+.
T Consensus 35 ~CF~C~~C~~~L~~g~~f~-~~-~g~~yC~~cy~~~~~~--~~~~~~~~~~~~~~~ 86 (123)
T 2l3k_A 35 ECFKCAACQKHFSVGDRYL-LI-NSDIVCEQDIYEWTKI--NGGSGGSGGSGGDVM 86 (123)
T ss_dssp TTCBCTTTCCBCCTTCEEE-EC-SSSEEEGGGHHHHHHH--HTCCCCCCSCCSCCE
T ss_pred ccCccccCCCCCCCCCcEE-ee-CCEEEcHHHhHHHhcc--ccCCCCCCCccCCCc
Confidence 3589999999995433443 33 4999999999987642 344444443333443
No 216
>2cur_A Skeletal muscle LIM-protein 1; four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=36.14 E-value=60 Score=21.89 Aligned_cols=34 Identities=21% Similarity=0.681 Sum_probs=26.2
Q ss_pred ceeccCccccccCCcceEEEccCCccchHHHHHHHhh
Q 022029 211 SFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMA 247 (304)
Q Consensus 211 ~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k 247 (304)
=|.|..|.+.|.+. .+ +. .=|.+||..|..+++.
T Consensus 31 CF~C~~C~~~L~~~-~~-~~-~~~~~yC~~cy~~~f~ 64 (69)
T 2cur_A 31 CFVCVTCSKKLAGQ-RF-TA-VEDQYYCVDCYKNFVS 64 (69)
T ss_dssp TTBCTTTCCBCTTS-CE-EE-CSSCEEEHHHHHHHHT
T ss_pred cCEECCCCCCCCCC-cc-Ee-ECCEEECHHHhHHHhc
Confidence 58899999999865 33 23 3499999999988763
No 217
>1x62_A C-terminal LIM domain protein 1; PDZ and LIM domain protein 1, LIM domain protein CLP-36, contractIle protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=36.07 E-value=41 Score=23.60 Aligned_cols=60 Identities=12% Similarity=0.339 Sum_probs=37.6
Q ss_pred CCccCCCCCCcCCCCCceee-ecccCCCcccccCCCCCceeccCccccccCCcceEEEccCCccchHHHHHHHhh
Q 022029 174 ASTICPEGKEKLKLKSLFPV-YFTEDKSEEKKSSSNDKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMA 247 (304)
Q Consensus 174 ~~~~CP~sg~~l~lKDLi~l-~f~~~~~~~~~~~~~~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k 247 (304)
...+|+.-++++.-. +|.. .-.+- ..=|.|..|.+.|.+. .++ .. =|.+||..|+.+++.
T Consensus 14 ~~~~C~~C~~~I~~~-~~~a~~~~~H----------~~CF~C~~C~~~L~~~-~~~-~~-~g~~yC~~cy~~~~~ 74 (79)
T 1x62_A 14 KLPMCDKCGTGIVGV-FVKLRDRHRH----------PECYVCTDCGTNLKQK-GHF-FV-EDQIYCEKHARERVS 74 (79)
T ss_dssp CCCCCSSSCCCCCSS-CEECSSCEEC----------TTTTSCSSSCCCHHHH-CCE-ES-SSCEECHHHHHHHHS
T ss_pred CCCccccCCCCccCc-EEEECcceeC----------cCcCeeCCCCCCCCCC-CeE-eE-CCEEECHHHHHHHhC
Confidence 356888777766532 2221 11111 1347899999999764 222 33 499999999998764
No 218
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.95 E-value=19 Score=20.31 Aligned_cols=16 Identities=25% Similarity=0.627 Sum_probs=13.2
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
...|.|++|.+.|...
T Consensus 7 ~k~~~C~~C~k~f~~~ 22 (36)
T 2elq_A 7 GKPFKCSLCEYATRSK 22 (36)
T ss_dssp CCSEECSSSSCEESCH
T ss_pred CCCccCCCCCchhCCH
Confidence 4569999999999775
No 219
>2xzm_6 RPS27E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_6
Probab=35.89 E-value=17 Score=26.91 Aligned_cols=28 Identities=25% Similarity=0.707 Sum_probs=22.6
Q ss_pred eeccCccc---cccCCcceEEEccCCccchH
Q 022029 212 FICPSCKV---TLTNTLSLVALSSCGHVFCK 239 (304)
Q Consensus 212 ~~CPIc~k---~~~~~~~~v~l~~CGhVfc~ 239 (304)
..||-|.. +|++.+..|.-..||.++|.
T Consensus 33 VkCp~C~n~q~VFShA~t~V~C~~Cg~~L~~ 63 (81)
T 2xzm_6 33 VKCAQCQNIQMIFSNAQSTIICEKCSAILCK 63 (81)
T ss_dssp EECSSSCCEEEEETTCSSCEECSSSCCEEEE
T ss_pred eECCCCCCeeEEEecCccEEEccCCCCEEee
Confidence 47999986 68888877888888888874
No 220
>1b8t_A Protein (CRP1); LIM domain, muscle differentiation, contractIle; NMR {Gallus gallus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3 PDB: 1ibi_A 1qli_A 1cxx_A 1ctl_A 2o13_A
Probab=35.81 E-value=32 Score=28.70 Aligned_cols=70 Identities=20% Similarity=0.312 Sum_probs=47.5
Q ss_pred CccCCCCCCcCCCCCceeee-cccCCCcccccCCCCCceeccCccccccCCcceEEEccCCccchHHHHHHHhhcCCCCC
Q 022029 175 STICPEGKEKLKLKSLFPVY-FTEDKSEEKKSSSNDKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCL 253 (304)
Q Consensus 175 ~~~CP~sg~~l~lKDLi~l~-f~~~~~~~~~~~~~~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~~~~CP 253 (304)
..+|+.-++++...++|... -.+- ..=|.|..|.+.|.+. .++ . .=|.+||..|..+++ ..+|.
T Consensus 115 ~~~C~~C~~~I~~~~~v~a~~~~~H----------~~CF~C~~C~~~L~~~-~~~-~-~~g~~yC~~cy~~~f--~~kc~ 179 (192)
T 1b8t_A 115 SDGCPRCGQAVYAAEKVIGAGKSWH----------KSCFRCAKCGKSLEST-TLA-D-KDGEIYCKGCYAKNF--GPKGF 179 (192)
T ss_dssp CEECTTTSCEECSSSCEEETTEEEC----------TTTCBCTTTCCBCCSS-SEE-E-ETTEEEEHHHHHHHT--CCCCC
T ss_pred CCcCCCCCCEecCcEEEecCCCccc----------hhcCCccccCCCCCCC-ccc-c-cCCEEeCHHHHHHhc--CCcCC
Confidence 45688777777655555321 0111 2358999999999875 333 3 449999999999875 45799
Q ss_pred CCCCCC
Q 022029 254 VCNKPC 259 (304)
Q Consensus 254 vC~~~f 259 (304)
.|+...
T Consensus 180 ~C~~~~ 185 (192)
T 1b8t_A 180 GFGQGA 185 (192)
T ss_dssp CCCCCC
T ss_pred CCCCcc
Confidence 998764
No 221
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=35.80 E-value=15 Score=19.26 Aligned_cols=14 Identities=21% Similarity=0.532 Sum_probs=10.8
Q ss_pred ceeccCccccccCC
Q 022029 211 SFICPSCKVTLTNT 224 (304)
Q Consensus 211 ~~~CPIc~k~~~~~ 224 (304)
.|.|++|.+.|...
T Consensus 3 ~~~C~~C~k~f~~~ 16 (27)
T 2kvh_A 3 PFSCSLCPQRSRDF 16 (27)
T ss_dssp CEECSSSSCEESSH
T ss_pred CccCCCcChhhCCH
Confidence 47888888888764
No 222
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=35.78 E-value=15 Score=19.28 Aligned_cols=14 Identities=14% Similarity=0.565 Sum_probs=10.6
Q ss_pred ceeccCccccccCC
Q 022029 211 SFICPSCKVTLTNT 224 (304)
Q Consensus 211 ~~~CPIc~k~~~~~ 224 (304)
.|.|++|.+.|...
T Consensus 3 ~~~C~~C~k~f~~~ 16 (28)
T 2kvf_A 3 PYSCSVCGKRFSLK 16 (28)
T ss_dssp SEECSSSCCEESCH
T ss_pred CccCCCCCcccCCH
Confidence 47888888888764
No 223
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=35.68 E-value=12 Score=26.32 Aligned_cols=40 Identities=18% Similarity=0.445 Sum_probs=23.6
Q ss_pred ceeccCccccccCCcceEEEccCCccchHHHHHHHh-hcCCCCCCCCCCCCC
Q 022029 211 SFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFM-AVDKVCLVCNKPCKE 261 (304)
Q Consensus 211 ~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~-k~~~~CPvC~~~f~~ 261 (304)
.|.|++|.+.|.....+. -|. .... .....|++|++.|..
T Consensus 3 ~~~C~~C~k~f~~~~~L~-----~H~------~~H~~~~~~~C~~C~k~f~~ 43 (88)
T 1llm_C 3 PFQCRICMRNFSRSDHLT-----THI------RTHTGEKPFACDICGRKFAR 43 (88)
T ss_dssp CEECTTTCCEESCHHHHH-----HHH------HHHHCCCCEECTTTCCEESS
T ss_pred CCcCCCCCCccCCHHHHH-----HHH------HHcCCCCCccCCCCCCccCC
Confidence 589999999987753210 111 0001 123578889888864
No 224
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.66 E-value=19 Score=20.20 Aligned_cols=16 Identities=25% Similarity=0.685 Sum_probs=13.1
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 7 ~k~~~C~~C~k~f~~~ 22 (36)
T 2elt_A 7 GKPYKCPQCSYASAIK 22 (36)
T ss_dssp CCSEECSSSSCEESSH
T ss_pred CCCCCCCCCCcccCCH
Confidence 4569999999998775
No 225
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=35.58 E-value=10 Score=32.27 Aligned_cols=12 Identities=17% Similarity=0.559 Sum_probs=9.1
Q ss_pred ceeccCcccccc
Q 022029 211 SFICPSCKVTLT 222 (304)
Q Consensus 211 ~~~CPIc~k~~~ 222 (304)
.|.|++|+-++.
T Consensus 155 ~~~C~~CG~~~~ 166 (191)
T 1lko_A 155 KWRCRNCGYVHE 166 (191)
T ss_dssp EEEETTTCCEEE
T ss_pred eEEECCCCCEee
Confidence 689998876654
No 226
>3iay_A DNA polymerase delta catalytic subunit; protein-DNA complex, DNA replication, DNA-BI DNA-directed DNA polymerase, exonuclease, hydrolase; HET: DNA DOC DCP; 2.00A {Saccharomyces cerevisiae}
Probab=35.44 E-value=55 Score=34.48 Aligned_cols=33 Identities=24% Similarity=0.409 Sum_probs=26.0
Q ss_pred CceecCCCceeehh--------hHHHHHHHhhHHHHHHHHH
Q 022029 52 DPLCCQKGHIYCKE--------CILECLLSQKKDIQRKLVA 84 (304)
Q Consensus 52 dPV~t~~G~lyckE--------cIle~ll~qkkei~r~~~~ 84 (304)
+-+.+|.|+.|++. .||+.||..|+++|++++.
T Consensus 577 ~~~~~p~g~~f~~~~~~~gilp~~l~~ll~~R~~~K~~mk~ 617 (919)
T 3iay_A 577 DYVITPNGDYFVTTKRRRGILPIILDELISARKRAKKDLRD 617 (919)
T ss_dssp TEEECTTSCEEECTTTCCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ceeeCCCCcEEeccCCCCCchHHHHHHHHHHHHHHHHHHhh
Confidence 44578999999974 4778888888888888763
No 227
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=34.27 E-value=15 Score=19.38 Aligned_cols=14 Identities=21% Similarity=0.750 Sum_probs=11.0
Q ss_pred ceeccCccccccCC
Q 022029 211 SFICPSCKVTLTNT 224 (304)
Q Consensus 211 ~~~CPIc~k~~~~~ 224 (304)
.|.|++|.+.|...
T Consensus 3 ~~~C~~C~k~f~~~ 16 (27)
T 2kvg_A 3 PYRCPLCRAGCPSL 16 (27)
T ss_dssp TEEETTTTEEESCH
T ss_pred CcCCCCCCcccCCH
Confidence 47899998888764
No 228
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=34.02 E-value=38 Score=23.73 Aligned_cols=46 Identities=15% Similarity=0.320 Sum_probs=34.4
Q ss_pred CceeccCccccccCCcceEEEccCCccchHHHHHHHhh----cCCCCCCCCCCC
Q 022029 210 KSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMA----VDKVCLVCNKPC 259 (304)
Q Consensus 210 ~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k----~~~~CPvC~~~f 259 (304)
....|.||.+. ..++.-..|...|-..|+.--+. ..+.|+.|...-
T Consensus 11 ~~~~C~vC~~~----~~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~~~ 60 (66)
T 2lri_C 11 PGARCGVCGDG----TDVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSGDV 60 (66)
T ss_dssp TTCCCTTTSCC----TTCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTTCC
T ss_pred CCCCcCCCCCC----CeEEECCCCCCceecccCCCccCcCCCCCEECccccCCC
Confidence 34679999863 34677789999999999974332 468999997643
No 229
>3i2d_A E3 SUMO-protein ligase SIZ1; signal transduction, replication, ring E3, PIAS, ubiquitin, UBC9, metal-binding, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=33.91 E-value=33 Score=32.43 Aligned_cols=32 Identities=13% Similarity=0.126 Sum_probs=26.2
Q ss_pred CcceecccCCCCCce-ecCCCce--eehhhHHHHH
Q 022029 40 FDACCLCLKPFIDPL-CCQKGHI--YCKECILECL 71 (304)
Q Consensus 40 F~~C~LcL~p~~dPV-~t~~G~l--yckEcIle~l 71 (304)
---|-|++.++..|| ....-|+ ||.+.+|+..
T Consensus 249 SL~CPlS~~ri~~PvRg~~C~HlQCFDl~sfL~~~ 283 (371)
T 3i2d_A 249 SLQCPISYTRMKYPSKSINCKHLQCFDALWFLHSQ 283 (371)
T ss_dssp ESBCTTTSSBCSSEEEETTCCSSCCEEHHHHHHHH
T ss_pred eecCCCccccccccCcCCcCCCcceECHHHHHHHh
Confidence 356999999999999 4556788 9999998853
No 230
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=33.64 E-value=55 Score=26.61 Aligned_cols=44 Identities=25% Similarity=0.568 Sum_probs=33.3
Q ss_pred CceeccCccccccCCcceEEEccCCccchHHHHHHHh-----------hcCCCCCCCCC
Q 022029 210 KSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFM-----------AVDKVCLVCNK 257 (304)
Q Consensus 210 ~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~-----------k~~~~CPvC~~ 257 (304)
....|.||.+. ..++.-..|-.+||..||...+ ...|.||.|..
T Consensus 62 ~~d~C~vC~~G----G~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~ 116 (142)
T 2lbm_A 62 MDEQCRWCAEG----GNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHP 116 (142)
T ss_dssp CBCSCSSSCCC----SSEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCC
T ss_pred CCCeecccCCC----CcEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccC
Confidence 45689999872 2455667999999999999543 14689999974
No 231
>2dar_A PDZ and LIM domain protein 5; enigma homolog protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=32.82 E-value=48 Score=23.86 Aligned_cols=45 Identities=16% Similarity=0.380 Sum_probs=32.7
Q ss_pred CceeccCccccccCCcceEEEccCCccchHHHHHHHhhcCCCCCCCCCCCCCCCceE
Q 022029 210 KSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKERNLVN 266 (304)
Q Consensus 210 ~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~~~~CPvC~~~f~~~diI~ 266 (304)
....|+.|.+.+.+. ++..-|.++..+| ..|-.|++++.....+.
T Consensus 24 ~~~~C~~C~~~I~~~----~v~a~~~~~H~~C--------F~C~~C~~~L~~~~f~~ 68 (90)
T 2dar_A 24 RTPMCAHCNQVIRGP----FLVALGKSWHPEE--------FNCAHCKNTMAYIGFVE 68 (90)
T ss_dssp CCCBBSSSCCBCCSC----EEEETTEEECTTT--------CBCSSSCCBCSSSCBEE
T ss_pred CCCCCccCCCEecce----EEEECCccccccC--------CccCCCCCCCCCCEeEe
Confidence 356899999999654 2345588887766 47999999998655543
No 232
>1wig_A KIAA1808 protein; LIM domain, zinc finger, metal-binding protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=32.80 E-value=16 Score=25.53 Aligned_cols=27 Identities=22% Similarity=0.482 Sum_probs=21.3
Q ss_pred ceecccCCCC--CceecCCCceeehhhHH
Q 022029 42 ACCLCLKPFI--DPLCCQKGHIYCKECIL 68 (304)
Q Consensus 42 ~C~LcL~p~~--dPV~t~~G~lyckEcIl 68 (304)
.|.-|-.|+. +...-.+|.|||+.|-.
T Consensus 33 ~C~~C~~~L~~~~~f~~~~~~~yC~~C~~ 61 (73)
T 1wig_A 33 LCVRCGQMFAEGEEMYLQGSSIWHPACRQ 61 (73)
T ss_dssp CCSSSCCCCCSSCCCEEETTEEECTTHHH
T ss_pred EeCCCCCCCCCCCeeEeeCCEEEChHHCh
Confidence 6888888886 45566689999999863
No 233
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=32.76 E-value=22 Score=19.75 Aligned_cols=16 Identities=13% Similarity=0.648 Sum_probs=12.8
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 5 ~k~~~C~~C~k~f~~~ 20 (35)
T 2elx_A 5 SSGYVCALCLKKFVSS 20 (35)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CCCeECCCCcchhCCH
Confidence 3468999999998774
No 234
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=32.64 E-value=13 Score=26.43 Aligned_cols=51 Identities=20% Similarity=0.539 Sum_probs=36.4
Q ss_pred CCceeccCccccccCCcceEEEccCCccchHHHHHHHhh----cCCCCCCCCCCCC
Q 022029 209 DKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMA----VDKVCLVCNKPCK 260 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k----~~~~CPvC~~~f~ 260 (304)
+....|+||.+.-.+ ..+|.-..|..-|-..|+.--.. ..+.||.|...+.
T Consensus 16 ~~~~~C~~C~~~~~~-~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~~~ 70 (75)
T 2k16_A 16 NQIWICPGCNKPDDG-SPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANKIK 70 (75)
T ss_dssp CEEECBTTTTBCCSS-CCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHHHC
T ss_pred CCCcCCCCCCCCCCC-CCEEEcCCCCcccccccCCCCccCCCCCCEEChhccCchh
Confidence 456789999987543 34666778988888899864321 3679999976654
No 235
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=32.61 E-value=16 Score=25.46 Aligned_cols=42 Identities=19% Similarity=0.391 Sum_probs=23.3
Q ss_pred CceeccCccccccCCcceEEEccCCccchHHHHHHHhhcCCCCCCCCCCCCC
Q 022029 210 KSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKE 261 (304)
Q Consensus 210 ~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~~~~CPvC~~~f~~ 261 (304)
..|.|++|.+.|.....+. -|+. ...-.....|++|+..|..
T Consensus 33 ~~~~C~~C~~~f~~~~~l~-----~H~~-----~h~~~~~~~C~~C~~~f~~ 74 (90)
T 1a1h_A 33 KPFQCRICMRNFSRSDHLT-----THIR-----THTGEKPFACDICGRKFAR 74 (90)
T ss_dssp CCEECTTTCCEESCHHHHH-----HHHH-----HHHCCCCEECTTTCCEESS
T ss_pred CCccCCCCCcccCCHHHHH-----HHHH-----HcCCCCCccCCCCCchhCC
Confidence 4588888888876642110 1110 0000123589999998864
No 236
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=32.25 E-value=31 Score=24.11 Aligned_cols=35 Identities=20% Similarity=0.525 Sum_probs=25.4
Q ss_pred CCceeccCccccccCCcceEEEc-cCCccchHHHHH
Q 022029 209 DKSFICPSCKVTLTNTLSLVALS-SCGHVFCKKCAD 243 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~v~l~-~CGhVfc~~Ci~ 243 (304)
+..+.|++|.+..++....|.-. .|-.-|-..|+.
T Consensus 6 ~~~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvg 41 (65)
T 2vpb_A 6 DPVYPCGICTNEVNDDQDAILCEASCQKWFHRICTG 41 (65)
T ss_dssp ---CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHT
T ss_pred CCcCcCccCCCccCCCCCeEecccCccccCchhccC
Confidence 56789999999987765556666 788788888874
No 237
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=32.00 E-value=19 Score=20.42 Aligned_cols=16 Identities=31% Similarity=0.860 Sum_probs=12.8
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 9 ~k~~~C~~C~k~f~~~ 24 (37)
T 1p7a_A 9 IKPFQCPDCDRSFSRS 24 (37)
T ss_dssp SSSBCCTTTCCCBSSH
T ss_pred CCCccCCCCCcccCcH
Confidence 4568999999988764
No 238
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=31.99 E-value=18 Score=18.96 Aligned_cols=14 Identities=14% Similarity=0.672 Sum_probs=10.8
Q ss_pred ceeccCccccccCC
Q 022029 211 SFICPSCKVTLTNT 224 (304)
Q Consensus 211 ~~~CPIc~k~~~~~ 224 (304)
.|.|++|.+.|...
T Consensus 3 ~~~C~~C~~~f~~~ 16 (30)
T 2m0d_A 3 PYQCDYCGRSFSDP 16 (30)
T ss_dssp CEECTTTCCEESCH
T ss_pred CccCCCCCcccCCH
Confidence 47888888888764
No 239
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=38.15 E-value=9.7 Score=19.86 Aligned_cols=14 Identities=14% Similarity=0.705 Sum_probs=9.9
Q ss_pred eeccCccccccCCc
Q 022029 212 FICPSCKVTLTNTL 225 (304)
Q Consensus 212 ~~CPIc~k~~~~~~ 225 (304)
|.|++|.+.|....
T Consensus 3 ~~C~~C~k~f~~~~ 16 (26)
T 2lvu_A 3 YVCERCGKRFVQSS 16 (26)
Confidence 67788887776653
No 240
>3f6q_B LIM and senescent cell antigen-like-containing domain protein 1; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 2kbx_B 3ixe_B
Probab=31.91 E-value=24 Score=23.97 Aligned_cols=59 Identities=14% Similarity=0.284 Sum_probs=37.9
Q ss_pred CccCCCCCCcCCCCCce-eee-cccCCCcccccCCCCCceeccCccccccCCcceEEEccCCccchHHHHHHHh
Q 022029 175 STICPEGKEKLKLKSLF-PVY-FTEDKSEEKKSSSNDKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFM 246 (304)
Q Consensus 175 ~~~CP~sg~~l~lKDLi-~l~-f~~~~~~~~~~~~~~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~ 246 (304)
...|..-+.++...+.+ ... -..- ..-|.|..|.+.|.+. .+. ... |.+||..|..+++
T Consensus 11 ~~~C~~C~~~i~~~e~~~~~~~~~~H----------~~CF~C~~C~~~L~~~-~~~-~~~-g~~yC~~~y~~lf 71 (72)
T 3f6q_B 11 SATCERCKGGFAPAEKIVNSNGELYH----------EQCFVCAQCFQQFPEG-LFY-EFE-GRKYCEHDFQMLF 71 (72)
T ss_dssp TCBCTTTCCBCCTTCEEEEETTEEEE----------TTTSSCTTTCCCCGGG-CCE-EET-TEEECHHHHHHHT
T ss_pred CccchhcCccccCCceEEEeCcCeeC----------cCCCcccCCCCCCCCC-CeE-eEC-CeEeCHHHHHHhh
Confidence 35788777777765532 221 0111 1357899999999876 333 334 9999999988753
No 241
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=31.91 E-value=15 Score=19.27 Aligned_cols=13 Identities=23% Similarity=0.851 Sum_probs=9.8
Q ss_pred eeccCccccccCC
Q 022029 212 FICPSCKVTLTNT 224 (304)
Q Consensus 212 ~~CPIc~k~~~~~ 224 (304)
|.|++|.+.|...
T Consensus 3 ~~C~~C~~~f~~~ 15 (29)
T 1ard_A 3 FVCEVCTRAFARQ 15 (29)
T ss_dssp CBCTTTCCBCSSH
T ss_pred eECCCCCcccCCH
Confidence 6788888887664
No 242
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=31.67 E-value=41 Score=25.22 Aligned_cols=45 Identities=22% Similarity=0.553 Sum_probs=30.1
Q ss_pred ceeccCccccccCCcceEEEccCCccchHHHHHHH--hh--------------cCCCCCCCCC
Q 022029 211 SFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKF--MA--------------VDKVCLVCNK 257 (304)
Q Consensus 211 ~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~--~k--------------~~~~CPvC~~ 257 (304)
.-+|+||.- |+.... .--+.||-||-..|+++. .. .-|.||.|..
T Consensus 15 D~~C~VC~~-~t~~~l-~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~Cen 75 (89)
T 1wil_A 15 DEMCDVCEV-WTAESL-FPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDN 75 (89)
T ss_dssp SCCCTTTCC-CCSSCC-SSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCC
T ss_pred CcccCcccc-ccccce-eccccccccccHhhcccccccccHHHHHHHHccCCCCCccccccch
Confidence 468999874 333211 124679999999999995 11 1378999954
No 243
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=31.65 E-value=17 Score=18.95 Aligned_cols=14 Identities=21% Similarity=0.627 Sum_probs=10.4
Q ss_pred ceeccCccccccCC
Q 022029 211 SFICPSCKVTLTNT 224 (304)
Q Consensus 211 ~~~CPIc~k~~~~~ 224 (304)
.|.|++|.+.|...
T Consensus 2 ~~~C~~C~k~f~~~ 15 (29)
T 2m0f_A 2 PLKCRECGKQFTTS 15 (29)
T ss_dssp CEECTTTSCEESCH
T ss_pred CccCCCCCCccCCh
Confidence 47788888887664
No 244
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=31.61 E-value=35 Score=23.01 Aligned_cols=41 Identities=24% Similarity=0.378 Sum_probs=22.4
Q ss_pred CceeccC--ccccccCCcceEEEccCCccchHHHHHHHhhcCCCCCCCCCCCC
Q 022029 210 KSFICPS--CKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCK 260 (304)
Q Consensus 210 ~~~~CPI--c~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~~~~CPvC~~~f~ 260 (304)
..|.|++ |.+.|.....+. -|+- ...-.....|++|++.|.
T Consensus 37 ~~~~C~~~~C~k~f~~~~~L~-----~H~~-----~H~~~~~~~C~~C~k~F~ 79 (79)
T 2dlk_A 37 KSFSCPEPACGKSFNFKKHLK-----EHMK-----LHSDTRDYICEFSGPSSG 79 (79)
T ss_dssp CCEECSCTTTCCEESSHHHHH-----HHHH-----HHHTSCCCSCCSSSCCCC
T ss_pred CCeECCCCCCcCccCCHHHHH-----HHHH-----HhCCCCCeeCCCCCCCCC
Confidence 4578887 888776653210 1110 000013468999998873
No 245
>1a7i_A QCRP2 (LIM1); LIM domain containing proteins, metal-binding protein, zinc finger; NMR {Coturnix japonica} SCOP: g.39.1.3 g.39.1.3 PDB: 2o10_A
Probab=31.27 E-value=18 Score=25.63 Aligned_cols=68 Identities=16% Similarity=0.263 Sum_probs=39.4
Q ss_pred CccCCCCCCcCCCCCceeeec-ccCCCcccccCCCCCceeccCccccccCCcceEEEccCCccchHHHHHHHhhcCCCCC
Q 022029 175 STICPEGKEKLKLKSLFPVYF-TEDKSEEKKSSSNDKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCL 253 (304)
Q Consensus 175 ~~~CP~sg~~l~lKDLi~l~f-~~~~~~~~~~~~~~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~~~~CP 253 (304)
...|+.-++++...++|...- .+- ..=|.|..|.+.|.+.. +. .. =|.+||..|..+++ ..+|.
T Consensus 7 ~~~C~~C~~~I~~~~~~~a~~~~~H----------~~CF~C~~C~~~L~~~~-~~-~~-~~~~yC~~cy~~~f--~~~c~ 71 (81)
T 1a7i_A 7 GNKCGACGRTVYHAEEVQCDGRSFH----------RCCFLCMVCRKNLDSTT-VA-IH-DAEVYCKSCYGKKY--GPKGY 71 (81)
T ss_dssp -CBCSSSCCBCSSTTEEEETTEEEE----------SSSEECSSSCCEECSSC-CE-EE-TTEEECSHHHHHHC--C----
T ss_pred CCcCcCcCccccCceeEEeCCcccc----------cccCccCCCCCCCCCCC-eE-ee-CCEEECHHHHHHHh--CCccc
Confidence 357887788776556553310 111 13589999999998763 32 33 58999999998864 34566
Q ss_pred CCCC
Q 022029 254 VCNK 257 (304)
Q Consensus 254 vC~~ 257 (304)
-|+.
T Consensus 72 gcg~ 75 (81)
T 1a7i_A 72 GYGQ 75 (81)
T ss_dssp ----
T ss_pred ccCC
Confidence 6654
No 246
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.94 E-value=28 Score=19.73 Aligned_cols=16 Identities=19% Similarity=0.698 Sum_probs=12.9
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 7 ~k~~~C~~C~k~f~~~ 22 (37)
T 2elp_A 7 GRAMKCPYCDFYFMKN 22 (37)
T ss_dssp CCCEECSSSSCEECSS
T ss_pred CCCeECCCCChhhccC
Confidence 4568999999998775
No 247
>2kkx_A Uncharacterized protein ECS2156; methods development, U-box domain, structural genomics, PSI- protein structure initiative; NMR {Escherichia coli} PDB: 2kky_A
Probab=30.84 E-value=58 Score=25.07 Aligned_cols=55 Identities=9% Similarity=0.156 Sum_probs=40.1
Q ss_pred CCceeccCccccccCCcceEEEccCC-----ccchHHHHHHHhhcCCCCCCCCCCCCCCCceE
Q 022029 209 DKSFICPSCKVTLTNTLSLVALSSCG-----HVFCKKCADKFMAVDKVCLVCNKPCKERNLVN 266 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~v~l~~CG-----hVfc~~Ci~~~~k~~~~CPvC~~~f~~~diI~ 266 (304)
...+.|||++..-.+. |.++..+ -.|=..++.+++.....=|+.+.+|+..-||.
T Consensus 25 ee~l~CPITL~~PE~G---VFvkNs~~S~VCsLyD~~Al~~Lv~~~~~HPLSREpit~sMIv~ 84 (102)
T 2kkx_A 25 LEAIQCPITLEQPEKG---IFVKNSDGSDVCTLFDAAAFSRLVGEGLPHPLTREPITASIIVK 84 (102)
T ss_dssp TGGGCBTTTTBCCSEE---EEEEETTTTSEEEEEEHHHHHHHHHHTCCCTTTCCCCCTTTEEC
T ss_pred HHHcCCCeEEeeCCcc---eEEecCCCCccceecCHHHHHHHHhcCCCCCCccCCCCHhhEec
Confidence 4467899999876554 3445433 23567899999887778899999999865554
No 248
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=30.78 E-value=17 Score=18.80 Aligned_cols=13 Identities=15% Similarity=0.667 Sum_probs=8.6
Q ss_pred eeccCccccccCC
Q 022029 212 FICPSCKVTLTNT 224 (304)
Q Consensus 212 ~~CPIc~k~~~~~ 224 (304)
|.|++|.+.|...
T Consensus 2 ~~C~~C~k~f~~~ 14 (27)
T 1znf_A 2 YKCGLCERSFVEK 14 (27)
T ss_dssp CBCSSSCCBCSSH
T ss_pred ccCCCCCCcCCCH
Confidence 5677777777653
No 249
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=30.69 E-value=18 Score=18.99 Aligned_cols=14 Identities=29% Similarity=0.899 Sum_probs=10.8
Q ss_pred ceeccCccccccCC
Q 022029 211 SFICPSCKVTLTNT 224 (304)
Q Consensus 211 ~~~CPIc~k~~~~~ 224 (304)
.|.|++|.+.|...
T Consensus 2 ~~~C~~C~k~f~~~ 15 (29)
T 1rik_A 2 KFACPECPKRFMRS 15 (29)
T ss_dssp CEECSSSSCEESCS
T ss_pred CccCCCCCchhCCH
Confidence 37888888888765
No 250
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=30.46 E-value=16 Score=27.68 Aligned_cols=37 Identities=30% Similarity=0.750 Sum_probs=24.5
Q ss_pred CceeccCccccccCCcceEEEccCCccchHHHHHHHh---hcCCCCCCCCCCCCC
Q 022029 210 KSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFM---AVDKVCLVCNKPCKE 261 (304)
Q Consensus 210 ~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~---k~~~~CPvC~~~f~~ 261 (304)
..|.|++|.+.|..... +..-+ .....|++|++.|..
T Consensus 73 ~~~~C~~C~k~f~~~~~---------------l~~H~~~H~~~~~C~~C~k~f~~ 112 (129)
T 2wbt_A 73 SQFVCPLCLMPFSSSVS---------------LKQHIRYTEHTKVCPVCKKEFTS 112 (129)
T ss_dssp CSEECTTTCCEESSHHH---------------HHHHHHHTCCCCBCTTTCCBCSS
T ss_pred CCeECCCCCcccCCHhH---------------HHHHHHHCCCCCCCCCCCcccCC
Confidence 45889999888876531 11111 234689999999975
No 251
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.07 E-value=27 Score=19.64 Aligned_cols=16 Identities=19% Similarity=0.468 Sum_probs=12.9
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 7 ~k~~~C~~C~k~f~~~ 22 (36)
T 2elv_A 7 GLLYDCHICERKFKNE 22 (36)
T ss_dssp CCCEECSSSCCEESSH
T ss_pred CCCeECCCCCCccCCH
Confidence 4568999999988775
No 252
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=29.47 E-value=18 Score=18.77 Aligned_cols=13 Identities=23% Similarity=0.777 Sum_probs=9.3
Q ss_pred eeccCccccccCC
Q 022029 212 FICPSCKVTLTNT 224 (304)
Q Consensus 212 ~~CPIc~k~~~~~ 224 (304)
|.|++|.+.|...
T Consensus 3 ~~C~~C~~~f~~~ 15 (29)
T 2m0e_A 3 HKCPHCDKKFNQV 15 (29)
T ss_dssp CCCSSCCCCCCTT
T ss_pred CcCCCCCcccCCH
Confidence 6677777777664
No 253
>1nyp_A Pinch protein; LIM domain, protein recognition, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 PDB: 1u5s_B
Probab=29.34 E-value=26 Score=23.60 Aligned_cols=33 Identities=15% Similarity=0.518 Sum_probs=25.1
Q ss_pred ceeccCccccccCCcceEEEccCCccchHHHHHHHh
Q 022029 211 SFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFM 246 (304)
Q Consensus 211 ~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~ 246 (304)
-|.|..|.+.|.+. .++ . .=|.+||..|..+++
T Consensus 31 CF~C~~C~~~L~~~-~~~-~-~~g~~yC~~~y~~~f 63 (66)
T 1nyp_A 31 HFVCAKCEKPFLGH-RHY-E-RKGLAYCETHYNQLF 63 (66)
T ss_dssp TCBCTTTCCBCSSS-CCE-E-ETTEEECHHHHHHHC
T ss_pred cCEECCCCCCCCCC-ceE-e-ECCcEECHHHHHHHh
Confidence 48899999999874 332 3 448999999998764
No 254
>2d8x_A Protein pinch; LIM domain, pinch protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=29.26 E-value=71 Score=21.58 Aligned_cols=34 Identities=26% Similarity=0.701 Sum_probs=26.8
Q ss_pred ceeccCccccccCCcceEEEccCCccchHHHHHHHhh
Q 022029 211 SFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMA 247 (304)
Q Consensus 211 ~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k 247 (304)
=|.|..|.+.|.+. .++ ..-|.+||..|..+...
T Consensus 31 CF~C~~C~~~L~~~-~f~--~~~g~~yC~~c~~~~~~ 64 (70)
T 2d8x_A 31 CFRCDLCQEVLADI-GFV--KNAGRHLCRPCHNREKA 64 (70)
T ss_dssp TSBCSSSCCBCSSS-CCE--EETTEEECHHHHHHHHC
T ss_pred CCEeCCCCCcCCCC-ccE--eECCeEECHHHhhhhcC
Confidence 58999999999886 333 24599999999988753
No 255
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=29.10 E-value=19 Score=18.85 Aligned_cols=13 Identities=15% Similarity=0.703 Sum_probs=9.8
Q ss_pred eeccCccccccCC
Q 022029 212 FICPSCKVTLTNT 224 (304)
Q Consensus 212 ~~CPIc~k~~~~~ 224 (304)
|.|++|.+.|...
T Consensus 3 ~~C~~C~k~f~~~ 15 (30)
T 1klr_A 3 YQCQYCEFRSADS 15 (30)
T ss_dssp CCCSSSSCCCSCS
T ss_pred ccCCCCCCccCCH
Confidence 6788888887765
No 256
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.06 E-value=25 Score=19.86 Aligned_cols=16 Identities=25% Similarity=0.902 Sum_probs=13.0
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 7 ~k~~~C~~C~k~f~~~ 22 (37)
T 2elo_A 7 GRSYSCPVCEKSFSED 22 (37)
T ss_dssp CCCCEETTTTEECSSH
T ss_pred CCCcCCCCCCCccCCH
Confidence 4568999999999775
No 257
>3j21_d 50S ribosomal protein L34E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=28.66 E-value=29 Score=26.13 Aligned_cols=17 Identities=24% Similarity=0.514 Sum_probs=14.1
Q ss_pred EccCCccchHHHHHHHhh
Q 022029 230 LSSCGHVFCKKCADKFMA 247 (304)
Q Consensus 230 l~~CGhVfc~~Ci~~~~k 247 (304)
.++=| ++|..|+.+.|.
T Consensus 65 sRaYG-~lC~~Cvr~rI~ 81 (89)
T 3j21_d 65 ERPMP-HLCPRCMRKVMK 81 (89)
T ss_dssp SSSCT-TSCHHHHHHHHH
T ss_pred CCCcc-cchHHHHHHHHH
Confidence 45779 999999998764
No 258
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=28.49 E-value=27 Score=19.45 Aligned_cols=16 Identities=25% Similarity=0.762 Sum_probs=12.7
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 5 ~k~~~C~~C~k~f~~~ 20 (35)
T 1srk_A 5 KRPFVCRICLSAFTTK 20 (35)
T ss_dssp CSCEECSSSCCEESSH
T ss_pred CcCeeCCCCCcccCCH
Confidence 4468999999988764
No 259
>3qex_A DNA polymerase, GP43; difluorotoluene nucleoside; HET: DNA DOC DGT; 1.73A {Enterobacteria phage RB69} PDB: 3qei_A* 3qer_A* 3qes_A* 3qet_A* 3qep_A* 3qew_A* 3qev_A* 3s9h_A* 3sq0_A* 4dtn_A* 4dto_A* 4dtp_A* 4dtr_A* 4dts_A* 4dtu_A* 4dtx_A* 4e3s_A* 4fjm_A* 4fjl_A* 3spz_A* ...
Probab=28.49 E-value=2e+02 Score=30.24 Aligned_cols=37 Identities=19% Similarity=0.363 Sum_probs=30.3
Q ss_pred CceecCCCceeehh------hHHHHHHHhhHHHHHHHHHHHHH
Q 022029 52 DPLCCQKGHIYCKE------CILECLLSQKKDIQRKLVAHAAQ 88 (304)
Q Consensus 52 dPV~t~~G~lyckE------cIle~ll~qkkei~r~~~~~e~~ 88 (304)
+-+++|.|+.|+|. .||+.||.+|+++|+.++..++.
T Consensus 453 ~~~~~p~g~~F~k~~~GiLP~iL~~Ll~~R~~~K~~mk~~~~~ 495 (903)
T 3qex_A 453 VYSCSPNGMMYYKDRDGVVPTEITKVFNQRKEHKGYMLAAQRN 495 (903)
T ss_dssp SSEECTTSEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeeCCCCceEecCCCcchHHHHHHHHHHHHHHHHHHhhcccc
Confidence 33589999999884 57888889999999999887654
No 260
>2dj7_A Actin-binding LIM protein 3; LIM domain, Zn binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=28.47 E-value=68 Score=22.67 Aligned_cols=62 Identities=19% Similarity=0.287 Sum_probs=40.9
Q ss_pred CCCCccCCCCCCcCCCCCceeee-cccCCCcccccCCCCCceeccCccccccCCcceEEEccCCccchHHHHHHHhh
Q 022029 172 PSASTICPEGKEKLKLKSLFPVY-FTEDKSEEKKSSSNDKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMA 247 (304)
Q Consensus 172 p~~~~~CP~sg~~l~lKDLi~l~-f~~~~~~~~~~~~~~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k 247 (304)
+.....|+.=++++...++|... -.+- ..-|.|..|.+.|.+. + +.. =|.+||..|+.+++.
T Consensus 12 ~~~~~~C~~C~~~I~~~~~v~a~~~~wH----------~~CF~C~~C~~~L~~~--~-~~~-~g~~yC~~~y~~~fg 74 (80)
T 2dj7_A 12 IRGPSHCAGCKEEIKHGQSLLALDKQWH----------VSCFKCQTCSVILTGE--Y-ISK-DGVPYCESDYHAQFG 74 (80)
T ss_dssp CSSCSCCTTTCCCCSSSCCEEETTEEEC----------TTTCBCSSSCCBCSSC--C-EEE-TTEEECTTHHHHHTT
T ss_pred CCCCCCCcCcCCeeCCCeEEEECCcccc----------cccCCcCcCCCCcCCC--e-EEE-CCEEECHHHHHHHcC
Confidence 34457898888877655555321 1111 1358999999999852 3 333 489999999988753
No 261
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=34.35 E-value=12 Score=19.90 Aligned_cols=14 Identities=21% Similarity=0.444 Sum_probs=10.3
Q ss_pred eeccCccccccCCc
Q 022029 212 FICPSCKVTLTNTL 225 (304)
Q Consensus 212 ~~CPIc~k~~~~~~ 225 (304)
|.|++|.+.|....
T Consensus 3 ~~C~~C~k~f~~~~ 16 (29)
T 2lvt_A 3 CQCVMCGKAFTQAS 16 (29)
Confidence 67888888877653
No 262
>4dgw_B PRE-mRNA-splicing factor PRP21; zinc finger; 3.11A {Saccharomyces cerevisiae}
Probab=28.17 E-value=86 Score=25.78 Aligned_cols=31 Identities=16% Similarity=0.123 Sum_probs=17.8
Q ss_pred ehhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 022029 63 CKECILECLLSQKKDIQRKLVAHAAQQKQEKEEEEERLM 101 (304)
Q Consensus 63 ckEcIle~ll~qkkei~r~~~~~e~~~~~~~~~~~~~~~ 101 (304)
++-.||+.. .+..+|++++++++++++++.+
T Consensus 71 ~~~~iL~r~--------~~Rae~~k~~~~~~~k~e~~~e 101 (152)
T 4dgw_B 71 SKRTILDNC--------FERTQYWEFEKDKDREHDKLVE 101 (152)
T ss_dssp CHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHH
Confidence 455666543 3456788887666555444433
No 263
>1wyh_A SLIM 2, skeletal muscle LIM-protein 2; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=27.96 E-value=38 Score=23.09 Aligned_cols=33 Identities=21% Similarity=0.624 Sum_probs=25.8
Q ss_pred ceeccCccccccCCcceEEEccCCccchHHHHHHHh
Q 022029 211 SFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFM 246 (304)
Q Consensus 211 ~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~ 246 (304)
=|.|..|.+.|.+.. + +. .=|.+||..|..+++
T Consensus 33 CF~C~~C~~~L~~~~-~-~~-~~~~~yC~~cy~~~f 65 (72)
T 1wyh_A 33 CFLCSGCEQPLGSRS-F-VP-DKGAHYCVPCYENKF 65 (72)
T ss_dssp TCBCTTTCCBTTTSC-E-EE-ETTEEEEHHHHHHHT
T ss_pred cCeECCCCCcCCCCc-c-CC-cCCeEECHHHHHHHc
Confidence 588999999998853 3 23 358999999998865
No 264
>2d8z_A Four and A half LIM domains 2; skeletal muscle LIM-protein 3, LIM-domain protein DRAL, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=27.86 E-value=59 Score=21.97 Aligned_cols=33 Identities=18% Similarity=0.628 Sum_probs=25.5
Q ss_pred ceeccCccccccCCcceEEEccCCccchHHHHHHHh
Q 022029 211 SFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFM 246 (304)
Q Consensus 211 ~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~ 246 (304)
=|.|..|.+.|.+. .+. . .=|.+||..|..+++
T Consensus 31 CF~C~~C~~~L~~~-~~~-~-~~~~~yC~~cy~~~f 63 (70)
T 2d8z_A 31 CFVCTACRKQLSGQ-RFT-A-RDDFAYCLNCFCDLY 63 (70)
T ss_dssp TSBCSSSCCBCTTS-CCE-E-SSSSEECHHHHHHHT
T ss_pred CCccCCCCCcCCcC-ceE-e-eCCeEECHHHHHHHh
Confidence 47899999999765 332 3 348999999998865
No 265
>1x64_A Alpha-actinin-2 associated LIM protein; LIM domain, PDZ and LIM domain 3, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=27.85 E-value=55 Score=23.49 Aligned_cols=45 Identities=18% Similarity=0.406 Sum_probs=32.0
Q ss_pred CceeccCccccccCCcceEEEccCCccchHHHHHHHhhcCCCCCCCCCCCCCCCceE
Q 022029 210 KSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKERNLVN 266 (304)
Q Consensus 210 ~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~~~~CPvC~~~f~~~diI~ 266 (304)
....|..|.+.+.+. ++..-|.+|-.+| ..|-.|++.+...+.+.
T Consensus 24 ~~~~C~~C~~~I~~~----~~~a~~~~~H~~C--------F~C~~C~~~L~~~~~~~ 68 (89)
T 1x64_A 24 RMPLCDKCGSGIVGA----VVKARDKYRHPEC--------FVCADCNLNLKQKGYFF 68 (89)
T ss_dssp SCCBCTTTCCBCCSC----CEESSSCEECTTT--------CCCSSSCCCTTTSCCEE
T ss_pred cCCCcccCCCEeccc----EEEECCceECccC--------CEecCCCCCCCCCCeEe
Confidence 346899999998873 2445677776555 47899999997655443
No 266
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.65 E-value=31 Score=20.07 Aligned_cols=16 Identities=13% Similarity=0.611 Sum_probs=13.1
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 8 ~k~~~C~~C~k~f~~~ 23 (41)
T 2ept_A 8 QRVYECQECGKSFRQK 23 (41)
T ss_dssp CCCEECSSSCCEESSH
T ss_pred CCCeECCCCCCCcCCH
Confidence 4569999999998775
No 267
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=27.51 E-value=75 Score=25.39 Aligned_cols=43 Identities=26% Similarity=0.592 Sum_probs=31.7
Q ss_pred ceeccCccccccCCcceEEEccCCccchHHHHHHHh-----------hcCCCCCCCCC
Q 022029 211 SFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFM-----------AVDKVCLVCNK 257 (304)
Q Consensus 211 ~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~-----------k~~~~CPvC~~ 257 (304)
...|.||.+. ..++.-..|-.+||.+||...+ ...|.|+.|.-
T Consensus 57 ~~~C~vC~dG----G~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~ 110 (129)
T 3ql9_A 57 DEQCRWCAEG----GNLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHP 110 (129)
T ss_dssp BSSCTTTCCC----SEEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCC
T ss_pred CCcCeecCCC----CeeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCC
Confidence 4469999863 2445567899999999999642 24589999964
No 268
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=33.50 E-value=13 Score=19.78 Aligned_cols=14 Identities=14% Similarity=0.790 Sum_probs=9.4
Q ss_pred ceeccCccccccCC
Q 022029 211 SFICPSCKVTLTNT 224 (304)
Q Consensus 211 ~~~CPIc~k~~~~~ 224 (304)
.|.|++|.+.|...
T Consensus 3 ~~~C~~C~k~f~~~ 16 (30)
T 2lvr_A 3 PYVCIHCQRQFADP 16 (30)
Confidence 36677777777664
No 269
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=27.11 E-value=29 Score=24.72 Aligned_cols=11 Identities=45% Similarity=0.975 Sum_probs=6.5
Q ss_pred ceeccCccccc
Q 022029 211 SFICPSCKVTL 221 (304)
Q Consensus 211 ~~~CPIc~k~~ 221 (304)
.+.||+|+..+
T Consensus 8 iL~CP~ck~~L 18 (69)
T 2pk7_A 8 ILACPICKGPL 18 (69)
T ss_dssp TCCCTTTCCCC
T ss_pred heeCCCCCCcC
Confidence 35667766544
No 270
>2iyb_E Testin, TESS, TES; LIM domain, SH3-binding, tumour supressor LIM domain EVH1 DO cell motility, phosphorylation, cytoskeleton; 2.35A {Homo sapiens}
Probab=27.02 E-value=21 Score=24.22 Aligned_cols=33 Identities=27% Similarity=0.803 Sum_probs=24.4
Q ss_pred CceeccCccccccCCcceEEEccCCccch-HHHHHHH
Q 022029 210 KSFICPSCKVTLTNTLSLVALSSCGHVFC-KKCADKF 245 (304)
Q Consensus 210 ~~~~CPIc~k~~~~~~~~v~l~~CGhVfc-~~Ci~~~ 245 (304)
.=|.|..|.+.|.+. .++ ... |.+|| ..|.+++
T Consensus 31 ~CF~C~~C~~~L~~~-~f~-~~~-g~~yC~~~C~~k~ 64 (65)
T 2iyb_E 31 ECFLCSCCSKCLIGQ-KFM-PVE-GMVFCSVECKKRM 64 (65)
T ss_dssp TTSBCTTTCCBCTTS-CCE-EET-TEEESSHHHHHTT
T ss_pred CCEECCCCCCcCCCC-ceE-EEC-CEEecCHHHhhhh
Confidence 358899999999875 332 333 89999 9998764
No 271
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=26.99 E-value=24 Score=24.28 Aligned_cols=33 Identities=18% Similarity=0.656 Sum_probs=25.2
Q ss_pred ceeccCccccccCCcceEEEccCCccchHHHHHHHh
Q 022029 211 SFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFM 246 (304)
Q Consensus 211 ~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~ 246 (304)
=|.|..|.+.|.+. .++ . .=|.+||..|..+++
T Consensus 35 CF~C~~C~~~L~~~-~f~-~-~~g~~yC~~c~~~~~ 67 (72)
T 1x4l_A 35 CFNCKKCSLSLVGR-GFL-T-ERDDILCPDCGKDIS 67 (72)
T ss_dssp TCBCSSSCCBCTTS-CCE-E-CSSSEECHHHHHTCC
T ss_pred cCEeccCCCcCCCC-ccE-e-ECCEEEChhHcCccc
Confidence 58999999999865 332 3 458999999987754
No 272
>2l4z_A DNA endonuclease RBBP8, LIM domain transcription LMO4; protein-protein interaction, LIM-interaction DOM LMO4, RBBP8/CTIP, LIM-only protein; HET: DNA; NMR {Homo sapiens}
Probab=26.73 E-value=24 Score=27.53 Aligned_cols=28 Identities=18% Similarity=0.459 Sum_probs=19.5
Q ss_pred ceecccCCCC---CceecCCCceeehhhHHH
Q 022029 42 ACCLCLKPFI---DPLCCQKGHIYCKECILE 69 (304)
Q Consensus 42 ~C~LcL~p~~---dPV~t~~G~lyckEcIle 69 (304)
.|.-|-.++. ......+|.|||+.|-.+
T Consensus 90 ~C~~C~~~L~~~g~~f~~~dg~~yC~~cy~~ 120 (123)
T 2l4z_A 90 KCSSCQAQLGDIGTSSYTKSGMILCRNDYIR 120 (123)
T ss_dssp BCTTTCCBGGGTTCCCBCSSSCCBCHHHHHH
T ss_pred CcCcCCCcccccCCceEEECCEEeCHHHhhh
Confidence 5667777775 355667889999887543
No 273
>3gox_A Restriction endonuclease HPY99I; endonuclease-DNA complex, restriction enzyme, HPY99I, pseudopalindrome; HET: 1PE; 1.50A {Helicobacter pylori} PDB: 3fc3_A*
Probab=26.49 E-value=51 Score=28.33 Aligned_cols=76 Identities=20% Similarity=0.351 Sum_probs=46.6
Q ss_pred cCCCCCceeeecccCCCcc-cccCCCCCceeccCccccccCCcceEEEc--cCC----ccchHHHHHHH-----------
Q 022029 184 KLKLKSLFPVYFTEDKSEE-KKSSSNDKSFICPSCKVTLTNTLSLVALS--SCG----HVFCKKCADKF----------- 245 (304)
Q Consensus 184 ~l~lKDLi~l~f~~~~~~~-~~~~~~~~~~~CPIc~k~~~~~~~~v~l~--~CG----hVfc~~Ci~~~----------- 245 (304)
-+.+.+|..|+|......+ =......+.-.|+.|...-. .+.|-.-+ +=| +..|.+|-..+
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~K~C~~Cg~~Kp-~seF~rnkt~~DG~~~l~s~CkeC~~~lr~YGIT~eey~ 125 (200)
T 3gox_A 47 FIGLNELKRVDFSELEAIDIYRTGKGYDKKICNICHILKN-TDGFEINQTDAKGRKTTRPSCRECRKNIDGVKLSSTEKK 125 (200)
T ss_dssp ETTTTEEEEEEGGGEEECCGGGSSTTSSEEECTTTCBEEE-GGGSCEEEECTTSCEEECSSCHHHHHHHHCSCCCHHHHH
T ss_pred EEehhHhhhcchhhcceeeeeeccccCCCeECCCCCCCcc-hhhhcccccCCCCCcccCccChhhhhccCCcCCCHHHHH
Confidence 4678899999997643211 11123467789999997432 22222222 236 67899996422
Q ss_pred --hh-cC-----CCCCCCCCCCC
Q 022029 246 --MA-VD-----KVCLVCNKPCK 260 (304)
Q Consensus 246 --~k-~~-----~~CPvC~~~f~ 260 (304)
+. +. ..||+|+.++.
T Consensus 126 ~L~e~Qg~~~~~G~C~ICg~~~~ 148 (200)
T 3gox_A 126 KMDEIAPPKGSVFTCPICEKRSI 148 (200)
T ss_dssp HHHTTCCCTTCEEECTTTCCEEE
T ss_pred HHHHHcccCCCCCcCcCCCCCCC
Confidence 22 23 57999999886
No 274
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=26.41 E-value=13 Score=27.75 Aligned_cols=55 Identities=15% Similarity=0.288 Sum_probs=38.9
Q ss_pred CCceeccCccccc-cCCcceEEEccCCccchHHHHHHHh--hcCCCCCCCCCCCCCCC
Q 022029 209 DKSFICPSCKVTL-TNTLSLVALSSCGHVFCKKCADKFM--AVDKVCLVCNKPCKERN 263 (304)
Q Consensus 209 ~~~~~CPIc~k~~-~~~~~~v~l~~CGhVfc~~Ci~~~~--k~~~~CPvC~~~f~~~d 263 (304)
++...|.||.+.- .+...++.-..|.-.|-..|+.--. ...|.|+.|.......+
T Consensus 23 ~~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~vP~g~W~C~~C~~~~~~~~ 80 (88)
T 2l43_A 23 DEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQSRARPA 80 (88)
T ss_dssp CCCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSSCCSSCCCCHHHHHHTTSCC
T ss_pred CCCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCccCCCceECccccCccchhh
Confidence 4567899999864 3445677778898889889987422 24689999976555444
No 275
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.07 E-value=28 Score=20.30 Aligned_cols=16 Identities=19% Similarity=0.700 Sum_probs=13.0
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 9 ~k~~~C~~C~k~f~~~ 24 (42)
T 2ytb_A 9 EKPYRCDQCGKAFSQK 24 (42)
T ss_dssp CCSBCCTTTTCCBSSH
T ss_pred CCCeeCCCccchhCCH
Confidence 4568999999998775
No 276
>3s1b_A Mini-Z; VEGF, cystine knot, signaling protein; 2.90A {Homo sapiens}
Probab=25.53 E-value=25 Score=21.04 Aligned_cols=9 Identities=44% Similarity=1.047 Sum_probs=7.6
Q ss_pred eehhhHHHH
Q 022029 62 YCKECILEC 70 (304)
Q Consensus 62 yckEcIle~ 70 (304)
|+|||+|.|
T Consensus 1 fnkecllry 9 (34)
T 3s1b_A 1 FNKECLLRY 9 (34)
T ss_dssp CCHHHHHHH
T ss_pred CcHHHHHHH
Confidence 788998887
No 277
>1x4k_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=25.52 E-value=40 Score=22.93 Aligned_cols=58 Identities=21% Similarity=0.411 Sum_probs=37.5
Q ss_pred ccCCCCCCcCCCCC-ceeee-cccCCCcccccCCCCCceeccCccccccCCcceEEEccCCccchHHHHHHHh
Q 022029 176 TICPEGKEKLKLKS-LFPVY-FTEDKSEEKKSSSNDKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFM 246 (304)
Q Consensus 176 ~~CP~sg~~l~lKD-Li~l~-f~~~~~~~~~~~~~~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~ 246 (304)
.+|+.-++++...+ +|... -.+- ..=|.|..|.+.|.+. .++ . .=|.+||..|+.+++
T Consensus 6 ~~C~~C~~~I~~~~~~~~a~~~~~H----------~~CF~C~~C~~~L~~~-~~~-~-~~~~~yC~~cy~~~f 65 (72)
T 1x4k_A 6 SGCQECKKTIMPGTRKMEYKGSSWH----------ETCFICHRCQQPIGTK-SFI-P-KDNQNFCVPCYEKQH 65 (72)
T ss_dssp CCBSSSCCCCCSSSCEEEETTEEEE----------TTTTCCSSSCCCCCSS-SEE-E-ETTEEEEHHHHHHHT
T ss_pred CCCccCCCcccCCceEEEECcCeec----------ccCCcccccCCccCCC-ccC-c-cCCeEECHHHHhHHh
Confidence 46777677766543 33321 1111 1358999999999886 333 3 348999999998865
No 278
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.48 E-value=30 Score=20.18 Aligned_cols=16 Identities=31% Similarity=0.897 Sum_probs=13.1
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 8 ~k~~~C~~C~k~f~~~ 23 (42)
T 2yte_A 8 EKPYSCAECKETFSDN 23 (42)
T ss_dssp CCSCBCTTTCCBCSSH
T ss_pred CCCeECCCCCCccCCH
Confidence 4568999999999875
No 279
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=25.44 E-value=24 Score=18.64 Aligned_cols=13 Identities=23% Similarity=0.708 Sum_probs=9.5
Q ss_pred eeccCccccccCC
Q 022029 212 FICPSCKVTLTNT 224 (304)
Q Consensus 212 ~~CPIc~k~~~~~ 224 (304)
|.|++|.+.|...
T Consensus 3 ~~C~~C~k~f~~~ 15 (30)
T 1paa_A 3 YACGLCNRAFTRR 15 (30)
T ss_dssp SBCTTTCCBCSSS
T ss_pred cCCcccCcccCCh
Confidence 6788888777664
No 280
>2egq_A FHL1 protein; LIM domain, four and A half LIM domains protein 1, skeletal muscle LIM- protein 1, SLIM 1, structural genomics NPPSFA; NMR {Homo sapiens}
Probab=25.42 E-value=27 Score=24.33 Aligned_cols=31 Identities=39% Similarity=0.885 Sum_probs=22.9
Q ss_pred ceeccCccccccCCcceEEEccCCccchHHHHHH
Q 022029 211 SFICPSCKVTLTNTLSLVALSSCGHVFCKKCADK 244 (304)
Q Consensus 211 ~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~ 244 (304)
=|.|..|.+.|.+. .++ . .=|.+||..|..+
T Consensus 46 CF~C~~C~~~L~~~-~f~-~-~~~~~yC~~cy~~ 76 (77)
T 2egq_A 46 CFHCKKCSVNLANK-RFV-F-HQEQVYCPDCAKK 76 (77)
T ss_dssp TCBCSSSCCBCTTS-CCC-E-ETTEECCHHHHHH
T ss_pred cCEehhcCCCCCCC-ccE-e-ECCEEEChHHhcc
Confidence 48899999999865 222 2 3488999998765
No 281
>2q2f_A Selenoprotein S; anti-parallel coiled-coil, endoplasmic reticulum, membrane, selenocysteine, transmembrane, structural genomics; HET: MSE; 1.50A {Homo sapiens}
Probab=25.25 E-value=1.7e+02 Score=21.79 Aligned_cols=31 Identities=16% Similarity=0.222 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 022029 83 VAHAAQQKQEKEEEEERLMLQKARELDAFDQ 113 (304)
Q Consensus 83 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~F~~ 113 (304)
.++.++.+.=++++.+..++.|++.|+.|++
T Consensus 58 EeldAqAe~~keKQkqlEEeKR~qkIe~We~ 88 (89)
T 2q2f_A 58 EELNAQVEKHKEKLKQLEEEKRRQKIEMWDS 88 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3444444455666666777778888888763
No 282
>1v6g_A Actin binding LIM protein 2; LIM domain, zinc binding domain, ablim2, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=25.19 E-value=38 Score=23.83 Aligned_cols=12 Identities=25% Similarity=1.060 Sum_probs=6.8
Q ss_pred eeccCccccccC
Q 022029 212 FICPSCKVTLTN 223 (304)
Q Consensus 212 ~~CPIc~k~~~~ 223 (304)
|.|..|.+.|..
T Consensus 42 F~C~~C~~~L~~ 53 (81)
T 1v6g_A 42 FVCAVCRLPFPP 53 (81)
T ss_dssp SSCSSSCCCCCS
T ss_pred CccccCCCCCCC
Confidence 555566555554
No 283
>1x68_A FHL5 protein; four-and-A-half LIM protein 5, zinc finger domain, AN actin- interacting protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=25.17 E-value=26 Score=24.43 Aligned_cols=26 Identities=23% Similarity=0.666 Sum_probs=20.1
Q ss_pred ceecccCCCCC-ceecCCCceeehhhH
Q 022029 42 ACCLCLKPFID-PLCCQKGHIYCKECI 67 (304)
Q Consensus 42 ~C~LcL~p~~d-PV~t~~G~lyckEcI 67 (304)
.|.-|-.++.+ +....+|.|||+.|-
T Consensus 37 ~C~~C~~~L~~~~f~~~~g~~yC~~cy 63 (76)
T 1x68_A 37 NCGKCSVSLVGKGFLTQNKEIFCQKCG 63 (76)
T ss_dssp BCTTTCCBCSSSCEEEETTEEEETTTT
T ss_pred ChhhCCCcCCCCceEeECCEEECHHHh
Confidence 57788888763 456778999999874
No 284
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=25.05 E-value=30 Score=19.99 Aligned_cols=16 Identities=25% Similarity=0.702 Sum_probs=12.5
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 4 ~k~~~C~~C~k~f~~~ 19 (39)
T 1njq_A 4 PRSYTCSFCKREFRSA 19 (39)
T ss_dssp SSSEECTTTCCEESSH
T ss_pred CCceECCCCCcccCCH
Confidence 3468999999988764
No 285
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.96 E-value=33 Score=20.33 Aligned_cols=17 Identities=24% Similarity=0.643 Sum_probs=13.9
Q ss_pred CCceeccCccccccCCc
Q 022029 209 DKSFICPSCKVTLTNTL 225 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~ 225 (304)
+..|.|++|.+.|....
T Consensus 10 ~k~~~C~~C~k~f~~~~ 26 (44)
T 2yu5_A 10 ENPFKCSKCDRVFTQRN 26 (44)
T ss_dssp CCSEECSSSSCEESSSH
T ss_pred CCCeECCCCCchhCCHH
Confidence 45699999999998763
No 286
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=24.23 E-value=41 Score=31.81 Aligned_cols=35 Identities=20% Similarity=0.318 Sum_probs=27.3
Q ss_pred CcceecccCCCCC----c--eec--CCCceeehhhHHHHHHHh
Q 022029 40 FDACCLCLKPFID----P--LCC--QKGHIYCKECILECLLSQ 74 (304)
Q Consensus 40 F~~C~LcL~p~~d----P--V~t--~~G~lyckEcIle~ll~q 74 (304)
-.-|++|+.-..+ | +|- ..||-|-..||.+||.+.
T Consensus 308 ~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~ 350 (381)
T 3k1l_B 308 ELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTL 350 (381)
T ss_dssp CCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHH
T ss_pred CccCcccceeecCCCCCccccccCCccCCccchHHHHHHHHhC
Confidence 3469999987665 5 332 369999999999999864
No 287
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=24.23 E-value=30 Score=20.38 Aligned_cols=14 Identities=29% Similarity=0.904 Sum_probs=10.8
Q ss_pred ceeccCccccccCC
Q 022029 211 SFICPSCKVTLTNT 224 (304)
Q Consensus 211 ~~~CPIc~k~~~~~ 224 (304)
.+.||||+..+.+.
T Consensus 3 k~~CpvCk~q~Pd~ 16 (28)
T 2jvx_A 3 DFCCPKCQYQAPDM 16 (28)
T ss_dssp CEECTTSSCEESSH
T ss_pred cccCccccccCcCh
Confidence 58899998877663
No 288
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.19 E-value=33 Score=20.24 Aligned_cols=16 Identities=19% Similarity=0.719 Sum_probs=13.4
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
...|.|++|.+.|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (44)
T 2eof_A 10 EKPYECNECQKAFNTK 25 (44)
T ss_dssp CCSEECTTTCCEESCH
T ss_pred CCCeECCCCCcccCCH
Confidence 4569999999999875
No 289
>1x63_A Skeletal muscle LIM-protein 1; LIM domain, four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=24.17 E-value=49 Score=23.17 Aligned_cols=59 Identities=15% Similarity=0.313 Sum_probs=37.4
Q ss_pred ccCCCCCCcCCCCCc-eeee-cccCCCcccccCCCCCceeccCccccccCCcceEEEccCCccchHHHHHHHhh
Q 022029 176 TICPEGKEKLKLKSL-FPVY-FTEDKSEEKKSSSNDKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMA 247 (304)
Q Consensus 176 ~~CP~sg~~l~lKDL-i~l~-f~~~~~~~~~~~~~~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k 247 (304)
.+|+.-++++...+. |... -.+- ..=|.|..|.+.|.+. .++ . .=|.+||..|..+++.
T Consensus 16 ~~C~~C~~~I~~~~~~~~a~~~~~H----------~~CF~C~~C~~~L~~~-~~~-~-~~~~~yC~~cy~~~f~ 76 (82)
T 1x63_A 16 PKCKGCFKAIVAGDQNVEYKGTVWH----------KDCFTCSNCKQVIGTG-SFF-P-KGEDFYCVTCHETKFA 76 (82)
T ss_dssp CBCSSSCCBCCSSSCEEECSSCEEE----------TTTCCCSSSCCCCTTS-CEE-E-ETTEEEEHHHHHHHTS
T ss_pred CcCccCCcccccCceEEEECccccc----------cccCchhhCCCccCCC-ccE-e-eCCEEECHHHHHHHhC
Confidence 577777776665443 2211 0111 1348899999999886 333 3 3489999999988754
No 290
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=24.00 E-value=25 Score=19.72 Aligned_cols=13 Identities=31% Similarity=0.966 Sum_probs=9.6
Q ss_pred eeccCccccccCC
Q 022029 212 FICPSCKVTLTNT 224 (304)
Q Consensus 212 ~~CPIc~k~~~~~ 224 (304)
|.|++|.+.|...
T Consensus 3 ~~C~~C~k~F~~~ 15 (33)
T 1rim_A 3 FACPECPKRFMRS 15 (33)
T ss_dssp CCCSSSCCCCSSH
T ss_pred ccCCCCCchhCCH
Confidence 6788888877664
No 291
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.93 E-value=34 Score=20.38 Aligned_cols=16 Identities=19% Similarity=0.557 Sum_probs=13.2
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (44)
T 2epv_A 10 EKPYECNECGKAFIWK 25 (44)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CcCeECCCCCcccCch
Confidence 4579999999999775
No 292
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.88 E-value=35 Score=20.45 Aligned_cols=16 Identities=25% Similarity=0.719 Sum_probs=13.3
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2enf_A 10 EKPYKCNECGKVFTQN 25 (46)
T ss_dssp CCSCBCSSSCCBCSSH
T ss_pred CcCeECCCCCcccCCH
Confidence 4569999999999875
No 293
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=23.44 E-value=34 Score=19.91 Aligned_cols=16 Identities=19% Similarity=0.758 Sum_probs=13.2
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 9 ~~~~~C~~C~k~f~~~ 24 (42)
T 2epc_A 9 ETPYLCGQCGKSFTQR 24 (42)
T ss_dssp SCCEECSSSCCEESSH
T ss_pred CCCeECCCCCcccCCH
Confidence 4569999999999775
No 294
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.42 E-value=38 Score=20.33 Aligned_cols=16 Identities=19% Similarity=0.750 Sum_probs=13.4
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2enh_A 10 EKPYECDVCRKAFSHH 25 (46)
T ss_dssp SSSCBCTTTCCBCSSS
T ss_pred CCCcCCCCcCchhCCH
Confidence 4569999999999876
No 295
>1g47_A Pinch protein; LIM domain, Zn finger, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.42 E-value=26 Score=24.35 Aligned_cols=27 Identities=22% Similarity=0.610 Sum_probs=21.1
Q ss_pred ceecccCCCCC-ceecCCCceeehhhHH
Q 022029 42 ACCLCLKPFID-PLCCQKGHIYCKECIL 68 (304)
Q Consensus 42 ~C~LcL~p~~d-PV~t~~G~lyckEcIl 68 (304)
.|.-|..++.+ +....+|.+||+.|-.
T Consensus 41 ~C~~C~~~L~~~~~~~~~g~~yC~~~y~ 68 (77)
T 1g47_A 41 VCAQCFQQFPEGLFYEFEGRKYCEHDFQ 68 (77)
T ss_dssp CCTTTCCCCGGGCSEEETTEEECHHHHH
T ss_pred eECCCCCCCCCCCeEeECCeEeCHHHHH
Confidence 57788888864 5567799999998864
No 296
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=23.36 E-value=34 Score=19.96 Aligned_cols=16 Identities=13% Similarity=0.638 Sum_probs=13.2
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 8 ~k~~~C~~C~k~f~~~ 23 (42)
T 2el5_A 8 ENPYECSECGKAFNRK 23 (42)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CCCccCCCcChhhCCH
Confidence 4569999999999775
No 297
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.20 E-value=32 Score=20.31 Aligned_cols=16 Identities=13% Similarity=0.573 Sum_probs=13.3
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (44)
T 2eoj_A 10 ENPYECCECGKVFSRK 25 (44)
T ss_dssp CCSCEETTTTEECSSH
T ss_pred CcCeeCCCCCCccCCH
Confidence 4569999999999875
No 298
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=23.18 E-value=49 Score=24.42 Aligned_cols=19 Identities=16% Similarity=0.165 Sum_probs=12.0
Q ss_pred CCCCCCCCCCCCCCCceEe
Q 022029 249 DKVCLVCNKPCKERNLVNV 267 (304)
Q Consensus 249 ~~~CPvC~~~f~~~diI~L 267 (304)
+..|+.|+.-++++.|+..
T Consensus 51 ~yFC~~C~~LiSkkrv~f~ 69 (81)
T 2jrp_A 51 DYFCQNGHGLISKKRVNFV 69 (81)
T ss_dssp EECCTTTTCCCCTTSSEEE
T ss_pred CeeeccCCCEeecceEEEE
Confidence 3457777777766666543
No 299
>2d8y_A Eplin protein; LIM domain, epithelial protein LOST in neoplasm, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.12 E-value=1.3e+02 Score=21.53 Aligned_cols=61 Identities=20% Similarity=0.314 Sum_probs=40.7
Q ss_pred CCccCCCCCCcCCCCCceeeec-ccCCCcccccCCCCCceeccCccccccCCcceEEEccCCccchHHHHHHHhh
Q 022029 174 ASTICPEGKEKLKLKSLFPVYF-TEDKSEEKKSSSNDKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMA 247 (304)
Q Consensus 174 ~~~~CP~sg~~l~lKDLi~l~f-~~~~~~~~~~~~~~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k 247 (304)
....|+.-++++...++|...- .+- ..=|.|..|.+.|.+.. + + ..=|.+||..|+.+++.
T Consensus 14 ~~~~C~~C~~~I~~~~~v~a~~~~~H----------~~CF~C~~C~~~L~~~~-~-~-~~~g~~yC~~~y~~~f~ 75 (91)
T 2d8y_A 14 ARETCVECQKTVYPMERLLANQQVFH----------ISCFRCSYCNNKLSLGT-Y-A-SLHGRIYCKPHFNQLFK 75 (91)
T ss_dssp SSCBCTTTCCBCCTTSEEECSSSEEE----------TTTCBCTTTCCBCCTTT-C-C-CSSSCCCCHHHHHHHSC
T ss_pred CCCcCccCCCccCCceeEEECCCEEC----------CCCCeeCCCCCCCCCCC-c-E-eECCEEECHHHHHHHhC
Confidence 3468888888777656553210 110 13588999999998853 2 2 33489999999988753
No 300
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.98 E-value=36 Score=20.13 Aligned_cols=17 Identities=29% Similarity=0.677 Sum_probs=14.0
Q ss_pred CCceeccCccccccCCc
Q 022029 209 DKSFICPSCKVTLTNTL 225 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~ 225 (304)
+..|.|++|.+.|....
T Consensus 10 ~~~~~C~~C~k~F~~~~ 26 (44)
T 2eox_A 10 SKSYNCNECGKAFTRIF 26 (44)
T ss_dssp CCCEEETTTTEEESSSH
T ss_pred CCCeECcccCcccCCHH
Confidence 45699999999998863
No 301
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.96 E-value=35 Score=20.43 Aligned_cols=16 Identities=31% Similarity=0.864 Sum_probs=13.2
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
...|.|++|.+.|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2emg_A 10 ENPFICSECGKVFTHK 25 (46)
T ss_dssp CCSCBCTTTCCBCSSH
T ss_pred CCCEECCccCcccCCH
Confidence 4569999999999875
No 302
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=22.88 E-value=40 Score=24.88 Aligned_cols=51 Identities=24% Similarity=0.413 Sum_probs=27.7
Q ss_pred CceeccCccccccCCcce-EEEccCCccchHHHHHHHhhcCCCCCCCCCCCCCCCceEec
Q 022029 210 KSFICPSCKVTLTNTLSL-VALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKERNLVNVE 268 (304)
Q Consensus 210 ~~~~CPIc~k~~~~~~~~-v~l~~CGhVfc~~Ci~~~~k~~~~CPvC~~~f~~~diI~L~ 268 (304)
..|.|+||.-++....-- ..-.+-|--| .. +-.++.||+|+.+ +++++.+.
T Consensus 26 ~~y~C~vCGyvYD~~~Gdp~~gI~pGT~f-----ed-lPddW~CPvCga~--K~~F~~i~ 77 (81)
T 2kn9_A 26 KLFRCIQCGFEYDEALGWPEDGIAAGTRW-----DD-IPDDWSCPDCGAA--KSDFEMVE 77 (81)
T ss_dssp CEEEETTTCCEEETTTCBTTTTBCTTCCT-----TT-SCTTCCCTTTCCC--GGGEEEEC
T ss_pred ceEEeCCCCEEEcCCcCCcccCcCCCCCh-----hH-CCCCCcCCCCCCC--HHHcEEcc
Confidence 479999998776542100 0000113322 11 2346899999984 44666654
No 303
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.87 E-value=38 Score=20.32 Aligned_cols=17 Identities=29% Similarity=0.710 Sum_probs=13.8
Q ss_pred CCceeccCccccccCCc
Q 022029 209 DKSFICPSCKVTLTNTL 225 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~ 225 (304)
+..|.|++|.+.|....
T Consensus 10 ~k~~~C~~C~k~f~~~~ 26 (46)
T 2eoy_A 10 EKCFKCNKCEKTFSCSK 26 (46)
T ss_dssp SCCEECSSSCCEESSSH
T ss_pred CCCEECcCCCCcCCCHH
Confidence 45699999999998763
No 304
>1cgj_I Pancreatic secretory trypsin inhibitor (kazal type) variant 4; serine protease/inhibitor complex; 2.30A {Homo sapiens} SCOP: g.68.1.1
Probab=22.66 E-value=60 Score=21.79 Aligned_cols=20 Identities=35% Similarity=0.760 Sum_probs=17.8
Q ss_pred CCCceecCCCceeehhhHHH
Q 022029 50 FIDPLCCQKGHIYCKECILE 69 (304)
Q Consensus 50 ~~dPV~t~~G~lyckEcIle 69 (304)
.-+|||..+|.-|.-+|.|.
T Consensus 19 ~~~PVCGsDG~TY~n~C~l~ 38 (56)
T 1cgj_I 19 EYRPVCGTDGDTYPNECVLC 38 (56)
T ss_dssp CCCCEEETTSCEESSHHHHH
T ss_pred CCCccCCCCCCEECCccHHH
Confidence 45899999999999999984
No 305
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=22.64 E-value=35 Score=24.77 Aligned_cols=12 Identities=25% Similarity=0.952 Sum_probs=6.2
Q ss_pred eeccCccccccC
Q 022029 212 FICPSCKVTLTN 223 (304)
Q Consensus 212 ~~CPIc~k~~~~ 223 (304)
+.|++|.+.|..
T Consensus 29 h~C~~Cgk~F~~ 40 (85)
T 2lv2_A 29 HLCPVCGESFAS 40 (85)
T ss_dssp EECTTSCCEESS
T ss_pred EECCCCCCCcCc
Confidence 455555555544
No 306
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=22.61 E-value=23 Score=29.02 Aligned_cols=13 Identities=15% Similarity=0.764 Sum_probs=8.9
Q ss_pred ceeccCccccccC
Q 022029 211 SFICPSCKVTLTN 223 (304)
Q Consensus 211 ~~~CPIc~k~~~~ 223 (304)
.|.|.-|++.|..
T Consensus 132 ~y~C~~Cg~~~~~ 144 (165)
T 2lcq_A 132 RYVCIGCGRKFST 144 (165)
T ss_dssp CEEESSSCCEESS
T ss_pred EEECCCCCCcccC
Confidence 4777777777653
No 307
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.60 E-value=35 Score=19.95 Aligned_cols=16 Identities=19% Similarity=0.623 Sum_probs=12.9
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 9 ~k~~~C~~C~k~f~~~ 24 (42)
T 2eos_A 9 EKPYPCEICGTRFRHL 24 (42)
T ss_dssp SCCBCCSSSCCCBSSH
T ss_pred CCCEECCCCCCccCCH
Confidence 4568999999998775
No 308
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.54 E-value=39 Score=20.32 Aligned_cols=16 Identities=19% Similarity=0.625 Sum_probs=13.3
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2eon_A 10 EKPYKCQVCGKAFRVS 25 (46)
T ss_dssp CCSCBCSSSCCBCSSH
T ss_pred CcccCCCCCCcccCcH
Confidence 4569999999999875
No 309
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=22.47 E-value=31 Score=24.56 Aligned_cols=16 Identities=6% Similarity=0.067 Sum_probs=8.9
Q ss_pred CCCCCCCCCCCCCceE
Q 022029 251 VCLVCNKPCKERNLVN 266 (304)
Q Consensus 251 ~CPvC~~~f~~~diI~ 266 (304)
.|+.|+..|-..|=|+
T Consensus 28 iC~~cg~~YPI~dGIP 43 (68)
T 2hf1_A 28 ICKGDRLAFPIKDGIP 43 (68)
T ss_dssp EETTTTEEEEEETTEE
T ss_pred EcCCCCcEecCCCCee
Confidence 4666666665444444
No 310
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.37 E-value=37 Score=20.24 Aligned_cols=16 Identities=19% Similarity=0.640 Sum_probs=13.4
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
...|.|++|.+.|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2eow_A 10 EKPYKCNECGKAFRAR 25 (46)
T ss_dssp CCCEECTTSCCEESSH
T ss_pred CCCeeccccCChhcCH
Confidence 4569999999999875
No 311
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=22.36 E-value=35 Score=24.25 Aligned_cols=38 Identities=11% Similarity=0.088 Sum_probs=21.3
Q ss_pred CceeccCccccccCCcceEEEccCCccchHHHHHHHhhcCCCCCCCCCCCCCCCceEe
Q 022029 210 KSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKERNLVNV 267 (304)
Q Consensus 210 ~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k~~~~CPvC~~~f~~~diI~L 267 (304)
..+.||+|+..+.- .... ....|+.|+..|-..|=|++
T Consensus 7 ~iL~CP~ck~~L~~------~~~~--------------~~LiC~~cg~~YPI~dGIPv 44 (68)
T 2jr6_A 7 DILVCPVTKGRLEY------HQDK--------------QELWSRQAKLAYPIKDGIPY 44 (68)
T ss_dssp CCCBCSSSCCBCEE------ETTT--------------TEEEETTTTEEEEEETTEEC
T ss_pred hheECCCCCCcCeE------eCCC--------------CEEEcCCCCcEecCCCCeee
Confidence 45788888865532 2222 22356777777765454443
No 312
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.29 E-value=37 Score=20.35 Aligned_cols=16 Identities=13% Similarity=0.650 Sum_probs=13.4
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 10 ~~~~~C~~C~k~F~~~ 25 (46)
T 2emi_A 10 ERHYECSECGKAFIQK 25 (46)
T ss_dssp CCCEECSSSCCEESSH
T ss_pred CCCCCCCCCCcccCCH
Confidence 4569999999999875
No 313
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.25 E-value=38 Score=20.23 Aligned_cols=16 Identities=25% Similarity=0.804 Sum_probs=13.3
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
...|.|++|.+.|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2yts_A 10 EKPYICNECGKSFIQK 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CcCEECCCCChhhCCh
Confidence 4569999999999775
No 314
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.19 E-value=39 Score=20.17 Aligned_cols=16 Identities=25% Similarity=0.785 Sum_probs=13.4
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
...|.|++|.+.|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2ytf_A 10 EKPFECSECQKAFNTK 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CCCcCCCCCCcccCCH
Confidence 4569999999999775
No 315
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.15 E-value=32 Score=20.25 Aligned_cols=16 Identities=19% Similarity=0.661 Sum_probs=12.9
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
...|.|++|.+.|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (44)
T 2en7_A 10 MKPYVCNECGKAFRSK 25 (44)
T ss_dssp SSSSCCTTTCCCCSSH
T ss_pred CcCeECCCCCCccCCH
Confidence 4468999999998775
No 316
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.14 E-value=40 Score=20.18 Aligned_cols=16 Identities=25% Similarity=0.717 Sum_probs=13.4
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 10 ~~~~~C~~C~k~F~~~ 25 (46)
T 2em3_A 10 EKPYECKVCSKAFTQK 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CcCeECCCCCcccCCH
Confidence 4569999999999875
No 317
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.10 E-value=41 Score=20.08 Aligned_cols=17 Identities=24% Similarity=0.684 Sum_probs=13.9
Q ss_pred CCceeccCccccccCCc
Q 022029 209 DKSFICPSCKVTLTNTL 225 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~ 225 (304)
+..|.|++|.+.|....
T Consensus 10 ~k~~~C~~C~k~F~~~~ 26 (46)
T 2en3_A 10 EKPFQCKECGMNFSWSC 26 (46)
T ss_dssp CCSEECSSSCCEESSSH
T ss_pred CCCeeCcccChhhCCHH
Confidence 45699999999998763
No 318
>1qxf_A GR2, 30S ribosomal protein S27E; structural genomics, beta sheet, PSI, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: g.41.8.4
Probab=22.09 E-value=40 Score=23.98 Aligned_cols=28 Identities=21% Similarity=0.615 Sum_probs=20.4
Q ss_pred eeccCccc---cccCCcceEEEccCCccchH
Q 022029 212 FICPSCKV---TLTNTLSLVALSSCGHVFCK 239 (304)
Q Consensus 212 ~~CPIc~k---~~~~~~~~v~l~~CGhVfc~ 239 (304)
..||-|.. +|+.++..|.-..||.++|.
T Consensus 8 VKCp~C~niq~VFShA~tvV~C~~Cg~~L~~ 38 (66)
T 1qxf_A 8 VKCPDCEHEQVIFDHPSTIVKCIICGRTVAE 38 (66)
T ss_dssp EECTTTCCEEEEESSCSSCEECSSSCCEEEE
T ss_pred EECCCCCCceEEEecCceEEEcccCCCEEee
Confidence 46888876 57777776777777777764
No 319
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=22.02 E-value=38 Score=20.95 Aligned_cols=16 Identities=31% Similarity=0.704 Sum_probs=12.6
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 5 ~kp~~C~~C~k~F~~~ 20 (48)
T 3iuf_A 5 DKPYACDICGKRYKNR 20 (48)
T ss_dssp TSCEECTTTCCEESSH
T ss_pred CcCEECCCcCcccCCH
Confidence 3468999999988775
No 320
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.99 E-value=36 Score=20.31 Aligned_cols=16 Identities=19% Similarity=0.623 Sum_probs=13.3
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
...|.|++|.+.|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2eq3_A 10 EKPYECNQCGKAFSVR 25 (46)
T ss_dssp CCSSEETTTTEECSSH
T ss_pred CCCeECCCCChhhCCH
Confidence 4569999999999775
No 321
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.96 E-value=33 Score=19.63 Aligned_cols=16 Identities=13% Similarity=0.532 Sum_probs=13.0
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 7 ~k~~~C~~C~k~f~~~ 22 (37)
T 2elm_A 7 GHLYYCSQCHYSSITK 22 (37)
T ss_dssp SCEEECSSSSCEEECH
T ss_pred CcCeECCCCCcccCCH
Confidence 4569999999998764
No 322
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.92 E-value=41 Score=19.86 Aligned_cols=16 Identities=25% Similarity=0.667 Sum_probs=13.3
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (44)
T 2emb_A 10 RKRYECSKCQATFNLR 25 (44)
T ss_dssp CSSEECTTTCCEESCH
T ss_pred CCCeECCCCCCccCCH
Confidence 4569999999999875
No 323
>2cuq_A Four and A half LIM domains 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=21.89 E-value=1.5e+02 Score=20.31 Aligned_cols=34 Identities=18% Similarity=0.602 Sum_probs=26.0
Q ss_pred ceeccCccccccCCcceEEEccCCccchHHHHHHHhh
Q 022029 211 SFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFMA 247 (304)
Q Consensus 211 ~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~k 247 (304)
=|.|..|.+.|.+. .+ +. .=|.+||..|..+++.
T Consensus 41 CF~C~~C~~~L~~~-~~-~~-~~~~~yC~~cy~~~f~ 74 (80)
T 2cuq_A 41 CLVCTGCQTPLAGQ-QF-TS-RDEDPYCVACFGELFA 74 (80)
T ss_dssp TCBCSSSCCBCTTC-CE-EE-CSSSEEEHHHHHHHTT
T ss_pred hCCcccCCCcCCCC-ee-Ee-ECCEEECHHHHHHHcC
Confidence 58999999999764 33 33 4489999999988653
No 324
>1ovx_A ATP-dependent CLP protease ATP-binding subunit CL; treble CLEF zinc finger, homodimer, metal binding protein; NMR {Escherichia coli} SCOP: g.39.1.11
Probab=21.88 E-value=68 Score=22.80 Aligned_cols=33 Identities=18% Similarity=0.476 Sum_probs=23.9
Q ss_pred ceeccCccccccCCcceEEEccCCccchHHHHHHH
Q 022029 211 SFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKF 245 (304)
Q Consensus 211 ~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~ 245 (304)
...|+.|.+.-..-.+++ .-+ |-.+|.+||...
T Consensus 18 ~~~CSFCGK~e~eV~~LI-aGp-gvyICdeCI~~c 50 (67)
T 1ovx_A 18 LLYCSFCGKSQHEVRKLI-AGP-SVYICDECVDLC 50 (67)
T ss_dssp CCCCTTTCCCTTTSSSEE-ECS-SCEEEHHHHHHH
T ss_pred CcEecCCCCCHHHHcccC-CCC-CCChhHHHHHHH
Confidence 468999999776654443 223 767999999875
No 325
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=21.73 E-value=40 Score=20.22 Aligned_cols=16 Identities=25% Similarity=0.729 Sum_probs=13.4
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
...|.|++|.+.|...
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2emj_A 10 EKPFECAECGKSFSIS 25 (46)
T ss_dssp CCSEECSSSSCEESSH
T ss_pred CCCEECCCCCcccCCH
Confidence 4569999999999875
No 326
>2cor_A Pinch protein; LIM domain, particularly interesting NEW Cys- His protein, LIM and senescent cell antigen-like domains 1, structural genomics; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=21.71 E-value=69 Score=22.48 Aligned_cols=58 Identities=22% Similarity=0.386 Sum_probs=36.6
Q ss_pred CccCCCCCCcCCCCCceeeecccCCCcccccCCCCCceeccCccccccCCcceEEEccCCccchHHHHHHHh
Q 022029 175 STICPEGKEKLKLKSLFPVYFTEDKSEEKKSSSNDKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFM 246 (304)
Q Consensus 175 ~~~CP~sg~~l~lKDLi~l~f~~~~~~~~~~~~~~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~ 246 (304)
..+|+.-++++.-.-|..+.-.+- ..-|.|..|.+.|.+. .+ .. =|.+||..|+.+++
T Consensus 15 ~~~C~~C~~~I~~~~v~a~~~~~H----------~~CF~C~~C~~~L~~~-~f--~~-~g~~yC~~cy~~~f 72 (79)
T 2cor_A 15 KYICQKCHAIIDEQPLIFKNDPYH----------PDHFNCANCGKELTAD-AR--EL-KGELYCLPCHDKMG 72 (79)
T ss_dssp CCBCTTTCCBCCSCCCCCSSSCCC----------TTTSBCSSSCCBCCTT-CE--EE-TTEEECHHHHHTTS
T ss_pred CCCCccCCCEecceEEEECcceeC----------CCCCEeCCCCCccCCC-CE--eE-CCEEeCHHHHHHhC
Confidence 467887777666221211111111 2358999999999976 33 33 49999999988754
No 327
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.67 E-value=39 Score=20.14 Aligned_cols=16 Identities=25% Similarity=0.686 Sum_probs=13.4
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 10 ~~~~~C~~C~k~f~~~ 25 (46)
T 2eov_A 10 EKPYKCSDCGKSFTWK 25 (46)
T ss_dssp CCSCBCSSSCCBCSSH
T ss_pred CCCccCCccChhhCCH
Confidence 4569999999999875
No 328
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.56 E-value=42 Score=20.09 Aligned_cols=16 Identities=31% Similarity=0.478 Sum_probs=13.5
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
...|.|++|.+.|...
T Consensus 10 ~~~~~C~~C~k~f~~~ 25 (46)
T 2em5_A 10 TKSHQCHECGRGFTLK 25 (46)
T ss_dssp SCSEECSSSCCEESSH
T ss_pred CCCeECCcCCCccCCH
Confidence 4569999999999875
No 329
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.55 E-value=41 Score=20.07 Aligned_cols=16 Identities=19% Similarity=0.663 Sum_probs=13.3
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
...|.|++|.+.|...
T Consensus 10 ~~~~~C~~C~k~f~~~ 25 (46)
T 2yrj_A 10 EKPYRCGECGKAFAQK 25 (46)
T ss_dssp CCCEECSSSCCEESSH
T ss_pred CCCeECCCCCCccCCH
Confidence 4569999999999775
No 330
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.34 E-value=39 Score=20.20 Aligned_cols=16 Identities=19% Similarity=0.696 Sum_probs=13.4
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2eml_A 10 EKPYECSVCGKAFSHR 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CCCeeCCCcCCccCCH
Confidence 4569999999999875
No 331
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.28 E-value=39 Score=19.70 Aligned_cols=16 Identities=19% Similarity=0.725 Sum_probs=13.3
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 9 ~k~~~C~~C~k~f~~~ 24 (42)
T 2en2_A 9 EKPYKCETCGARFVQV 24 (42)
T ss_dssp SCSEECTTTCCEESSH
T ss_pred CCCEeCCCcChhhCCH
Confidence 4569999999999775
No 332
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.17 E-value=44 Score=19.87 Aligned_cols=17 Identities=18% Similarity=0.401 Sum_probs=14.0
Q ss_pred CCceeccCccccccCCc
Q 022029 209 DKSFICPSCKVTLTNTL 225 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~ 225 (304)
+..|.|++|.+.|....
T Consensus 10 ~k~~~C~~C~k~F~~~~ 26 (46)
T 2epw_A 10 EKPCKCTECGKAFCWKS 26 (46)
T ss_dssp CCSEECSSSCCEESSSH
T ss_pred CCCeeCCCCCCccCCHH
Confidence 45699999999998863
No 333
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.16 E-value=36 Score=20.37 Aligned_cols=16 Identities=25% Similarity=0.719 Sum_probs=13.1
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2yti_A 10 EKPYKCNECGKVFTQN 25 (46)
T ss_dssp CCTTCCSSSCCCCSSH
T ss_pred CcCeECCCCCcccCCh
Confidence 4568999999999775
No 334
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.15 E-value=42 Score=20.10 Aligned_cols=16 Identities=44% Similarity=0.823 Sum_probs=13.4
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2en9_A 10 KKLFKCNECKKTFTQS 25 (46)
T ss_dssp SCCCBCTTTCCBCSSH
T ss_pred CCCEECCccCcccCCH
Confidence 4569999999999875
No 335
>3qtl_D Kazal-type serine protease inhibitor SPI-1; serine protease -kazal type serine protease inhibitor comple hydrolase inhibitor; 2.60A {Carcinoscorpius rotundicauda}
Probab=21.13 E-value=46 Score=23.90 Aligned_cols=20 Identities=35% Similarity=0.883 Sum_probs=18.1
Q ss_pred CCceecCCCceeehhhHHHH
Q 022029 51 IDPLCCQKGHIYCKECILEC 70 (304)
Q Consensus 51 ~dPV~t~~G~lyckEcIle~ 70 (304)
-+|||..+|.-|.-+|.|..
T Consensus 7 ~~PVCGsdG~tY~N~C~l~~ 26 (75)
T 3qtl_D 7 YKPVCGANGEVYDNECFLNK 26 (75)
T ss_dssp CCCEEBTTSCEESSHHHHHH
T ss_pred CCceECCCCcEeCCHHHHHH
Confidence 48999999999999999874
No 336
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=21.11 E-value=30 Score=23.57 Aligned_cols=49 Identities=18% Similarity=0.293 Sum_probs=25.9
Q ss_pred ceeccCccccccCCcce-EEEccCCccchHHHHHHHhhcCCCCCCCCCCCCCCCceEe
Q 022029 211 SFICPSCKVTLTNTLSL-VALSSCGHVFCKKCADKFMAVDKVCLVCNKPCKERNLVNV 267 (304)
Q Consensus 211 ~~~CPIc~k~~~~~~~~-v~l~~CGhVfc~~Ci~~~~k~~~~CPvC~~~f~~~diI~L 267 (304)
.|+|++|.-++....-- ---.+-|.-|- . +-.++.||+|+.. +.++..+
T Consensus 3 ~y~C~vCGyvYd~~~Gdp~~gi~pGt~fe-----~-lP~dw~CP~Cg~~--K~~F~~~ 52 (54)
T 4rxn_A 3 KYTCTVCGYIYDPEDGDPDDGVNPGTDFK-----D-IPDDWVCPLCGVG--KDEFEEV 52 (54)
T ss_dssp CEEETTTCCEECTTTCBGGGTBCTTCCGG-----G-SCTTCBCTTTCCB--GGGEEEC
T ss_pred ceECCCCCeEECCCcCCcccCcCCCCChh-----H-CCCCCcCcCCCCc--HHHceEc
Confidence 58899988766542100 00001244442 2 2356899999985 3445443
No 337
>2ds5_A CLPX, ATP-dependent CLP protease ATP-binding subunit CLPX; treble cleft zinc finger, metal binding protein, protein binding; HET: PG4; 1.50A {Escherichia coli} SCOP: g.39.1.11 PDB: 2ds6_A 2ds8_A 2ds7_A
Probab=21.10 E-value=93 Score=20.78 Aligned_cols=33 Identities=18% Similarity=0.476 Sum_probs=23.7
Q ss_pred ceeccCccccccCCcceEEEccCCccchHHHHHHH
Q 022029 211 SFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKF 245 (304)
Q Consensus 211 ~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~ 245 (304)
...|..|.+.-..-.+++ .-+ |-.+|.+|+...
T Consensus 11 ~~~CSFCGk~~~ev~~LI-aGp-gv~IC~eCi~~~ 43 (51)
T 2ds5_A 11 LLYCSFCGKSQHEVRKLI-AGP-SVYICDECVDLC 43 (51)
T ss_dssp CCBCTTTCCBTTTSSCEE-ECS-SCEEEHHHHHHH
T ss_pred CcEecCCCCCHHHhcccC-CCC-CCEehHHHHHHH
Confidence 468999999776654433 223 667999999864
No 338
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.03 E-value=40 Score=20.20 Aligned_cols=16 Identities=31% Similarity=0.767 Sum_probs=13.2
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2yth_A 10 EKPFQCEECGKRFTQN 25 (46)
T ss_dssp SSSBCCSSSCCCBSSH
T ss_pred CcCCCCCCCCcccCCH
Confidence 4569999999999875
No 339
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.02 E-value=41 Score=20.09 Aligned_cols=16 Identities=25% Similarity=0.767 Sum_probs=13.4
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2ep3_A 10 EKPYRCAECGKAFTDR 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CCCeECCCCCchhCCH
Confidence 4569999999999875
No 340
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=21.01 E-value=38 Score=20.49 Aligned_cols=17 Identities=18% Similarity=0.673 Sum_probs=14.1
Q ss_pred CCceeccCccccccCCc
Q 022029 209 DKSFICPSCKVTLTNTL 225 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~ 225 (304)
+..|.|++|.+.|+..+
T Consensus 6 ekp~~C~~CgK~F~~~s 22 (36)
T 1fv5_A 6 PARFMCLPCGIAFSSPS 22 (36)
T ss_dssp CCCCEETTTTEECSCHH
T ss_pred ccCeECCCCCCccCCHh
Confidence 45799999999998864
No 341
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=20.98 E-value=45 Score=19.98 Aligned_cols=17 Identities=24% Similarity=0.593 Sum_probs=14.1
Q ss_pred CCceeccCccccccCCc
Q 022029 209 DKSFICPSCKVTLTNTL 225 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~ 225 (304)
+..|.|++|.+.|....
T Consensus 10 ~k~~~C~~C~k~f~~~~ 26 (46)
T 2ely_A 10 EKPFKCVECGKGFSRRS 26 (46)
T ss_dssp CCSBCCSSSCCCBSSTT
T ss_pred CCCcccCccCcccCCHH
Confidence 45699999999998863
No 342
>3d00_A Tungsten formylmethanofuran dehydrogenase subunit; FWDE/GAPDH domain-like fold, structural genomics, joint CENT structural genomics; HET: MSE; 1.90A {Syntrophus aciditrophicus}
Probab=20.93 E-value=65 Score=27.34 Aligned_cols=26 Identities=23% Similarity=0.719 Sum_probs=21.0
Q ss_pred CCceeccCccccccCCcceEEEccCCccchHHHHH
Q 022029 209 DKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCAD 243 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~ 243 (304)
-....|++|.+.+-.. |-.+|..|..
T Consensus 161 ~~~~~C~~CGE~~~~~---------g~~~C~~C~~ 186 (191)
T 3d00_A 161 GKIVLCPQCREAYPAQ---------DGELCLSCQG 186 (191)
T ss_dssp CCEEECTTTCCEEEGG---------GCSSCHHHHT
T ss_pred cCCEECCcCCCChhhC---------CCcCCccccC
Confidence 4678999999976543 8999999975
No 343
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.93 E-value=43 Score=20.05 Aligned_cols=16 Identities=19% Similarity=0.690 Sum_probs=13.1
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
...|.|++|.+.|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2em6_A 10 EKCYKCDVCGKEFSQS 25 (46)
T ss_dssp CCCCBCSSSCCBCSSH
T ss_pred CCCeECCCCCcccCCH
Confidence 4569999999999775
No 344
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.92 E-value=46 Score=19.83 Aligned_cols=16 Identities=25% Similarity=0.667 Sum_probs=13.4
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (45)
T 2epu_A 10 QKPFECTHCGKSFRAK 25 (45)
T ss_dssp CCSEEETTTTEEESSH
T ss_pred CcCccCCCCCCccCCh
Confidence 4579999999999775
No 345
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.83 E-value=44 Score=19.96 Aligned_cols=16 Identities=19% Similarity=0.673 Sum_probs=13.4
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2ene_A 10 EKPYKCNECGKVFRHN 25 (46)
T ss_dssp SSSEECSSSCCEESSH
T ss_pred CCCeECCCCCchhCCh
Confidence 4569999999999875
No 346
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.81 E-value=42 Score=20.04 Aligned_cols=17 Identities=24% Similarity=0.673 Sum_probs=14.2
Q ss_pred CCceeccCccccccCCc
Q 022029 209 DKSFICPSCKVTLTNTL 225 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~ 225 (304)
...|.|++|.+.|....
T Consensus 10 ~~~~~C~~C~k~f~~~~ 26 (46)
T 2ytg_A 10 EKPFKCGECGKSYNQRV 26 (46)
T ss_dssp CCSEECTTTCCEESSSH
T ss_pred CCCeECCCCCcccCCHH
Confidence 45799999999998864
No 347
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.80 E-value=43 Score=20.07 Aligned_cols=16 Identities=13% Similarity=0.667 Sum_probs=13.3
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2ytp_A 10 ERHYECSECGKAFARK 25 (46)
T ss_dssp CCCEECSSSCCEESSH
T ss_pred CCCeECCcCCcccCCH
Confidence 4569999999999875
No 348
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.70 E-value=43 Score=19.99 Aligned_cols=16 Identities=19% Similarity=0.573 Sum_probs=13.5
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2em7_A 10 EKPYKCEECGKGFICR 25 (46)
T ss_dssp CCSEECSSSCCEESCH
T ss_pred CcCccCCCccchhCCH
Confidence 4579999999999875
No 349
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.60 E-value=44 Score=19.91 Aligned_cols=16 Identities=19% Similarity=0.669 Sum_probs=13.5
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2eme_A 10 EKPYVCDYCGKAFGLS 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CCCeECCCCChhhCCH
Confidence 4569999999999875
No 350
>1j2o_A FLIN2, fusion of rhombotin-2 and LIM domain-binding protein 1; LIM-interaction-domain (LID), metal binding protein; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=20.58 E-value=55 Score=24.77 Aligned_cols=29 Identities=24% Similarity=0.428 Sum_probs=23.4
Q ss_pred ceecccCCCCC---ceecCCCceeehhhHHHH
Q 022029 42 ACCLCLKPFID---PLCCQKGHIYCKECILEC 70 (304)
Q Consensus 42 ~C~LcL~p~~d---PV~t~~G~lyckEcIle~ 70 (304)
.|.-|-.++.+ +....+|.|||+.+-.+.
T Consensus 32 ~C~~C~~~L~~~g~~~~~~~g~~yC~~~y~~~ 63 (114)
T 1j2o_A 32 SCDLCGCRLGEVGRRLYYKLGRKLCRRDYLRL 63 (114)
T ss_dssp CCSSSCSCCCCSSSCCCCBTTBCCCHHHHHHH
T ss_pred cccccCCchhcCCCeeEEECCeeechHHHHHH
Confidence 67888899874 667789999999987653
No 351
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=20.56 E-value=39 Score=23.96 Aligned_cols=13 Identities=31% Similarity=0.544 Sum_probs=8.9
Q ss_pred CceeccCcccccc
Q 022029 210 KSFICPSCKVTLT 222 (304)
Q Consensus 210 ~~~~CPIc~k~~~ 222 (304)
..+.||+|+..+.
T Consensus 9 eiL~CP~ck~~L~ 21 (67)
T 2jny_A 9 EVLACPKDKGPLR 21 (67)
T ss_dssp CCCBCTTTCCBCE
T ss_pred HHhCCCCCCCcCe
Confidence 3567888887553
No 352
>3j20_W 30S ribosomal protein S27E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=20.52 E-value=46 Score=23.42 Aligned_cols=28 Identities=18% Similarity=0.435 Sum_probs=20.7
Q ss_pred eeccCccc---cccCCcceEEEccCCccchH
Q 022029 212 FICPSCKV---TLTNTLSLVALSSCGHVFCK 239 (304)
Q Consensus 212 ~~CPIc~k---~~~~~~~~v~l~~CGhVfc~ 239 (304)
..||-|.. .|++.+..|.-..||.++|.
T Consensus 16 VkCp~C~~~q~VFSha~t~V~C~~Cgt~L~~ 46 (63)
T 3j20_W 16 VKCIDCGNEQIVFSHPATKVRCLICGATLVE 46 (63)
T ss_dssp EECSSSCCEEEEESSCSSCEECSSSCCEEEE
T ss_pred EECCCCCCeeEEEecCCeEEEccCcCCEEec
Confidence 56888886 57887776777777777763
No 353
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.52 E-value=40 Score=20.16 Aligned_cols=16 Identities=19% Similarity=0.638 Sum_probs=13.1
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2eq1_A 10 EKPYKCNECGKAFRAH 25 (46)
T ss_dssp SCCCCCTTTTCCCSSH
T ss_pred CCCeECCcCChhhCCH
Confidence 4569999999999775
No 354
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.49 E-value=46 Score=19.87 Aligned_cols=17 Identities=24% Similarity=0.636 Sum_probs=14.2
Q ss_pred CCceeccCccccccCCc
Q 022029 209 DKSFICPSCKVTLTNTL 225 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~ 225 (304)
+..|.|++|.+.|....
T Consensus 10 ~k~~~C~~C~k~f~~~~ 26 (46)
T 2yu8_A 10 EKPYKCNECGKVFTQNS 26 (46)
T ss_dssp CSSEECSSSCCEESSSH
T ss_pred CCCeECCcCCchhCCHH
Confidence 45699999999998863
No 355
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.48 E-value=37 Score=20.32 Aligned_cols=16 Identities=25% Similarity=0.702 Sum_probs=13.1
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
...|.|++|.+.|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2eq2_A 10 GKPYQCNECGKAFSQT 25 (46)
T ss_dssp SCSSSCCSSCCCCSSH
T ss_pred CCCeECCCCCcccCCH
Confidence 4568999999999875
No 356
>2cr8_A MDM4 protein; ZF-ranbp domain, P53-binding protein MDM4, MDM2-like P53-binding DE protein, MDMX protein, double minute 4 protein; NMR {Homo sapiens} SCOP: g.41.11.1
Probab=20.42 E-value=34 Score=23.11 Aligned_cols=17 Identities=18% Similarity=0.716 Sum_probs=13.6
Q ss_pred CCCCceeccCccccccCC
Q 022029 207 SNDKSFICPSCKVTLTNT 224 (304)
Q Consensus 207 ~~~~~~~CPIc~k~~~~~ 224 (304)
..+..|.|+-|. .|+++
T Consensus 7 ~~eD~WkC~~C~-k~N~P 23 (53)
T 2cr8_A 7 GSEDEWQCTECK-KFNSP 23 (53)
T ss_dssp CCSCCEECSSSC-CEECS
T ss_pred CCcceeeccccc-ccCCC
Confidence 456789999999 67776
No 357
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.36 E-value=42 Score=20.09 Aligned_cols=16 Identities=13% Similarity=0.573 Sum_probs=13.3
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2em4_A 10 QRPYECIECGKAFKTK 25 (46)
T ss_dssp SSSEECSSSCCEESSH
T ss_pred CcCcCCCCCCCccCCH
Confidence 4569999999999875
No 358
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.33 E-value=47 Score=19.83 Aligned_cols=16 Identities=25% Similarity=0.700 Sum_probs=13.4
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2epz_A 10 EKPFDCIDCGKAFSDH 25 (46)
T ss_dssp CCSBCCTTTCCCBSSH
T ss_pred CCCeECCCCCceeCCH
Confidence 4569999999999875
No 359
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.32 E-value=44 Score=19.88 Aligned_cols=16 Identities=19% Similarity=0.530 Sum_probs=13.4
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 10 ~~~~~C~~C~k~f~~~ 25 (46)
T 2eop_A 10 EKPHECRECGKSFSFN 25 (46)
T ss_dssp CCSCBCTTTCCBCSSH
T ss_pred CCCeeCCCCCchhCCH
Confidence 4569999999999875
No 360
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.30 E-value=44 Score=20.04 Aligned_cols=16 Identities=25% Similarity=0.748 Sum_probs=13.3
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
...|.|++|.+.|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2yto_A 10 EKPYKCSDCGKAFTRK 25 (46)
T ss_dssp CCCEECSSSCCEESSH
T ss_pred CCCEECcccCCccCCH
Confidence 4569999999999875
No 361
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.29 E-value=44 Score=19.97 Aligned_cols=16 Identities=25% Similarity=0.717 Sum_probs=13.5
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2ep2_A 10 EKPYECSICGKSFTKK 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CcCcCCCCCCcccCCH
Confidence 4569999999999875
No 362
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.25 E-value=44 Score=20.03 Aligned_cols=17 Identities=12% Similarity=0.495 Sum_probs=14.0
Q ss_pred CCceeccCccccccCCc
Q 022029 209 DKSFICPSCKVTLTNTL 225 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~ 225 (304)
+..|.|++|.+.|....
T Consensus 10 ~k~~~C~~C~k~F~~~~ 26 (46)
T 2eoo_A 10 ERPYGCNECGKNFGRHS 26 (46)
T ss_dssp CCCEECSSSCCEESSHH
T ss_pred CCCEEccccCcccCCHH
Confidence 45699999999998863
No 363
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.18 E-value=43 Score=20.02 Aligned_cols=17 Identities=24% Similarity=0.768 Sum_probs=14.0
Q ss_pred CCceeccCccccccCCc
Q 022029 209 DKSFICPSCKVTLTNTL 225 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~ 225 (304)
+..|.|++|.+.|....
T Consensus 10 ~k~~~C~~C~k~F~~~~ 26 (46)
T 2emh_A 10 ERPYICTVCGKAFTDRS 26 (46)
T ss_dssp CCSEECTTTCCEESSHH
T ss_pred CCCcCCCCCCchhCCHH
Confidence 45699999999998863
No 364
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.14 E-value=43 Score=20.07 Aligned_cols=16 Identities=25% Similarity=0.710 Sum_probs=13.1
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2eoh_A 10 KKPYECKECRKTFIQI 25 (46)
T ss_dssp SCSCCCSSSCCCCSSH
T ss_pred CCCcCCCCcCchhCCH
Confidence 4568999999999775
No 365
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=20.13 E-value=57 Score=22.20 Aligned_cols=45 Identities=22% Similarity=0.465 Sum_probs=33.9
Q ss_pred CCceeccCccccccCCcceEEEccCCccchHHHHHHHh----hcCCCCCCCCC
Q 022029 209 DKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFM----AVDKVCLVCNK 257 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~----k~~~~CPvC~~ 257 (304)
.....|.||.+. ..++.-..|-..|-..|+..-+ ...+.||.|..
T Consensus 9 ~~~~~C~vC~~~----g~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~ 57 (61)
T 2l5u_A 9 DHQDYCEVCQQG----GEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEK 57 (61)
T ss_dssp CCCSSCTTTSCC----SSEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGG
T ss_pred CCCCCCccCCCC----CcEEECCCCChhhhhhccCCCCCCCCCCceECccccc
Confidence 346789999973 3567777899999999998532 24689999964
No 366
>1x3h_A Leupaxin; paxillin family, protein-protein interaction, LIM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.05 E-value=1.5e+02 Score=20.35 Aligned_cols=58 Identities=16% Similarity=0.238 Sum_probs=36.6
Q ss_pred ccCCCCCCcCCCCCceeeecccCCCcccccCCCCCceeccCccccccCCcceEEEccCCccchHHHHHHHh
Q 022029 176 TICPEGKEKLKLKSLFPVYFTEDKSEEKKSSSNDKSFICPSCKVTLTNTLSLVALSSCGHVFCKKCADKFM 246 (304)
Q Consensus 176 ~~CP~sg~~l~lKDLi~l~f~~~~~~~~~~~~~~~~~~CPIc~k~~~~~~~~v~l~~CGhVfc~~Ci~~~~ 246 (304)
+.|+.=++++.-.-|..+.-.+- ..-|.|..|.+.|.+. .++ . .=|.+||..|..+++
T Consensus 16 ~~C~~C~~~I~~~~v~a~~~~~H----------~~CF~C~~C~~~L~~~-~~~-~-~~~~~yC~~~y~~~f 73 (80)
T 1x3h_A 16 PKCGGCNRPVLENYLSAMDTVWH----------PECFVCGDCFTSFSTG-SFF-E-LDGRPFCELHYHHRR 73 (80)
T ss_dssp CBCTTTCCBCCSSCEEETTEEEC----------TTTCBCSSSCCBSCSS-CCE-E-SSSCEECHHHHHHHH
T ss_pred CccccCCCeecceeEEECCCeEe----------cCcCChhhCCCCCCCC-cEE-e-ECCEEECHHHHHHHc
Confidence 57777777666422211111111 1358999999999875 333 3 348999999998865
No 367
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.04 E-value=48 Score=19.84 Aligned_cols=16 Identities=19% Similarity=0.563 Sum_probs=13.6
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2em8_A 10 EKPYKCVECGKGYKRR 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CCCeECcccCchhCCH
Confidence 4579999999999875
No 368
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=20.01 E-value=46 Score=19.81 Aligned_cols=16 Identities=25% Similarity=0.540 Sum_probs=13.4
Q ss_pred CCceeccCccccccCC
Q 022029 209 DKSFICPSCKVTLTNT 224 (304)
Q Consensus 209 ~~~~~CPIc~k~~~~~ 224 (304)
+..|.|++|.+.|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2el4_A 10 VKPYGCSQCAKTFSLK 25 (46)
T ss_dssp CCSEECSSSSCEESSH
T ss_pred CCceECCCCCchhCCH
Confidence 4569999999999875
Done!