Query 022031
Match_columns 303
No_of_seqs 117 out of 380
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 12:57:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022031.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022031hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3uno_A Probable bacterioferrit 96.9 0.0061 2.1E-07 53.4 10.6 137 79-226 10-148 (189)
2 2qqy_A Sigma B operon; dodecam 96.9 0.052 1.8E-06 43.5 15.1 127 81-226 12-142 (149)
3 1krq_A Ferritin; H-chain like 96.8 0.0048 1.7E-07 52.3 8.5 135 80-225 6-142 (167)
4 1rcd_A L ferritin; iron storag 96.7 0.025 8.7E-07 48.3 12.9 138 78-226 11-154 (173)
5 2cih_A Ferritin heavy chain; a 96.7 0.02 6.9E-07 49.6 12.0 138 78-226 15-158 (183)
6 2fkz_A Bacterioferritin; ferro 96.7 0.12 4.2E-06 41.6 16.0 128 81-224 8-141 (155)
7 1eum_A Ferritin 1; ECFTNA, met 96.7 0.0084 2.9E-07 50.7 9.2 135 80-225 6-142 (165)
8 2y3q_A Bacterioferritin; metal 96.6 0.03 1E-06 45.6 12.2 131 81-224 8-141 (158)
9 3qz3_A Ferritin; structural ge 96.6 0.015 5.3E-07 50.4 10.6 138 78-227 13-153 (184)
10 4am5_A Bacterioferritin; metal 96.5 0.014 4.8E-07 48.7 9.6 128 80-224 7-137 (159)
11 2inc_A Toluene, O-xylene monoo 96.5 0.011 3.6E-07 59.3 10.0 140 81-228 93-248 (491)
12 3e6s_A Ferritin; iron storage, 96.4 0.021 7.2E-07 48.9 9.9 142 79-232 4-149 (168)
13 1s3q_A Ferritin; ferroxidase, 96.3 0.023 8E-07 48.6 9.9 136 79-226 7-145 (173)
14 3ka8_A Ferritin, middle subuni 96.2 0.14 4.8E-06 44.0 14.4 140 78-227 11-155 (176)
15 3qb9_A Bacterioferritin, BFR; 96.2 0.075 2.5E-06 44.4 12.2 133 80-224 9-143 (174)
16 3pvt_A Phenylacetic acid degra 96.1 0.0013 4.4E-08 62.4 1.2 140 67-226 24-173 (311)
17 3a68_A Sferh-4, ferritin-4, ch 96.1 0.72 2.5E-05 40.8 19.4 138 78-226 43-190 (212)
18 2v2p_A Ferritin light chain; m 96.0 0.12 3.9E-06 44.2 12.6 139 78-226 10-153 (174)
19 1nfv_A Bacterioferritin; 24 su 95.8 0.099 3.4E-06 43.9 11.4 122 81-215 13-137 (179)
20 2vzb_A Putative bacterioferrit 95.7 0.12 4.1E-06 42.6 11.5 137 80-224 18-160 (170)
21 3bvf_A Ferritin; iron storage, 95.6 0.054 1.8E-06 46.5 9.0 135 79-224 19-155 (181)
22 1jgc_A Bacterioferritin, BFR; 95.6 0.68 2.3E-05 37.5 15.4 131 81-224 8-141 (161)
23 3kxu_A Ferritin; iron storage 95.4 0.25 8.7E-06 43.2 12.8 140 78-227 11-155 (191)
24 2jd6_0 Ferritin homolog, ferri 95.4 0.13 4.3E-06 43.2 10.5 134 80-224 6-141 (174)
25 3gvy_A Bacterioferritin; iron 95.3 0.97 3.3E-05 36.9 15.5 131 81-224 8-141 (161)
26 3vnx_A Ferritin; 4-helix bundl 95.2 1.1 3.9E-05 39.4 16.4 139 78-226 38-185 (204)
27 3fvb_A Bacterioferritin; niaid 95.1 1 3.6E-05 38.1 15.4 130 80-224 28-162 (182)
28 3r2k_A Bacterioferritin, BFR; 94.9 1.3 4.3E-05 36.0 15.5 129 81-225 8-138 (154)
29 3oj5_A Ferritin family protein 94.8 0.23 8E-06 42.5 10.7 134 80-224 11-146 (189)
30 3uoi_A Bacterioferritin, BFR; 94.7 1.4 4.8E-05 35.9 16.5 129 81-224 10-143 (161)
31 1j30_A 144AA long hypothetical 94.7 0.26 8.9E-06 40.4 10.2 126 80-225 9-137 (144)
32 1otk_A Protein PAAC, phenylace 94.6 0.12 3.9E-06 47.6 8.6 92 119-226 39-147 (249)
33 1vlg_A Ferritin; TM1128, struc 94.6 0.28 9.4E-06 41.6 10.4 127 78-215 18-146 (176)
34 1mty_D Methane monooxygenase h 94.5 0.15 5.3E-06 51.2 10.0 139 81-226 90-245 (512)
35 2itb_A TRNA-(MS(2)IO(6)A)-hydr 94.3 0.84 2.9E-05 40.9 13.1 137 79-229 27-167 (206)
36 3u52_A Phenol hydroxylase comp 94.1 0.31 1E-05 49.0 11.1 138 80-227 97-250 (511)
37 3ge3_A Toluene-4-monooxygenase 93.5 0.58 2E-05 46.9 11.8 141 79-227 92-248 (500)
38 2fzf_A Hypothetical protein; s 93.2 1.5 5.1E-05 36.7 12.4 132 81-226 22-163 (175)
39 2vxx_A Starvation induced DNA 92.7 3 0.0001 35.6 13.7 122 80-214 29-162 (192)
40 1ji5_A DLP-1; dodecamer, four- 91.8 1.8 6.1E-05 34.6 10.7 89 115-214 35-134 (142)
41 1syy_A Ribonucleoside-diphosph 91.2 0.51 1.7E-05 44.6 7.7 145 76-227 71-244 (346)
42 1z6o_M Ferritin heavy chain; m 90.6 7.7 0.00026 33.4 16.9 135 78-229 19-172 (191)
43 1o9i_A Pseudocatalase; oxidore 90.2 1.4 4.8E-05 40.8 9.5 128 88-224 32-192 (266)
44 3ge3_B Toluene-4-monooxygenase 90.1 4.1 0.00014 38.5 12.8 141 80-227 118-275 (327)
45 1mhy_B Methane monooxygenase h 90.0 0.9 3.1E-05 44.2 8.4 140 81-226 149-307 (395)
46 1jig_A DLP-2; dodecamer, four- 88.1 4.5 0.00016 32.5 10.2 89 115-214 39-138 (146)
47 2c41_A DPS family DNA-binding 87.7 10 0.00035 31.0 14.2 121 80-214 11-143 (158)
48 3ee4_A Probable ribonucleoside 87.7 3.7 0.00012 38.5 10.6 106 121-227 105-228 (323)
49 2inc_B Toluene, O-xylene monoo 87.6 11 0.00036 35.5 13.7 134 87-227 121-271 (322)
50 4di0_A Rubrerythrin; ssgcid, s 86.9 1.8 6E-05 36.1 7.2 117 81-215 15-133 (144)
51 1n1q_A DPS protein; four-helix 86.8 5.8 0.0002 32.0 10.2 90 115-215 42-142 (149)
52 3hl1_A Ferritin like protein; 86.4 3.6 0.00012 39.0 9.8 66 75-143 6-71 (317)
53 2v8t_A Manganese-containing ps 86.3 15 0.00051 34.5 13.8 120 88-216 33-191 (302)
54 1mty_B Methane monooxygenase h 85.8 1.6 5.5E-05 42.2 7.2 138 83-226 143-299 (384)
55 1za0_A Possible acyl-[acyl-car 85.3 3.9 0.00013 37.9 9.2 103 121-270 102-223 (275)
56 2rcc_A Ribonucleoside-diphosph 83.8 3 0.0001 39.3 7.9 106 120-227 113-237 (346)
57 2oh3_A Rubrerythrin, COG1633: 83.1 15 0.00052 30.2 11.3 127 84-222 10-147 (167)
58 3chh_A P-aminobenzoate N-oxyge 82.3 20 0.0007 33.8 13.1 171 50-229 55-246 (336)
59 2d5k_A DPS, DPS family protein 82.1 9.9 0.00034 31.1 9.7 88 116-214 42-140 (156)
60 2uw1_A Desaturase, plastid del 80.0 13 0.00045 35.4 10.8 89 120-226 112-220 (338)
61 3pf7_A Benzoyl-COA oxygenase c 79.4 17 0.00058 36.1 11.6 126 79-226 108-256 (481)
62 3dhz_A Ribonucleotide reductas 78.7 38 0.0013 31.6 13.5 143 76-227 59-219 (329)
63 3pwf_A Rubrerythrin; non heme 77.9 4.3 0.00015 34.8 6.2 119 82-229 10-128 (170)
64 3k6c_A Uncharacterized protein 76.9 7.8 0.00027 30.7 6.9 52 84-141 24-75 (95)
65 2p1i_A Ribonucleotide reductas 76.9 8.2 0.00028 36.5 8.5 104 120-225 124-241 (349)
66 3iq1_A DPS family protein; csg 76.2 15 0.00051 30.4 9.0 88 117-214 54-151 (159)
67 3n37_A Ribonucleoside-diphosph 76.0 11 0.00037 35.1 8.9 101 120-226 92-208 (319)
68 1mxr_A Ribonucleotide reductas 75.7 4.2 0.00014 38.8 6.1 138 76-226 66-254 (375)
69 1o9r_A Agrobacterium tumefacie 75.7 19 0.00066 29.7 9.6 112 90-214 28-151 (162)
70 2yjk_A AFP, DPS; metal-binding 74.9 16 0.00053 30.4 8.8 85 119-214 58-152 (161)
71 1yuz_A Nigerythrin; rubrythrin 74.9 6.4 0.00022 34.5 6.6 130 82-227 31-162 (202)
72 1z6o_A Ferritin light chain; m 74.8 43 0.0015 29.3 14.6 69 80-149 37-108 (212)
73 3k6c_A Uncharacterized protein 74.5 3.1 0.00011 33.0 4.0 44 180-224 31-74 (95)
74 2chp_A MRGA, metalloregulation 73.5 29 0.001 28.4 10.1 83 119-214 50-145 (153)
75 1zpy_A Hypothetical protein NE 73.0 3.6 0.00012 32.6 4.0 40 184-224 35-74 (95)
76 3mjo_A Ribonucleotide reductas 71.5 9.6 0.00033 35.1 7.3 102 120-227 101-218 (296)
77 1lko_A Rubrerythrin all-iron(I 71.3 10 0.00035 32.7 7.0 129 82-224 11-142 (191)
78 2o1z_A Ribonucleotide reductas 70.4 8.3 0.00029 35.8 6.6 101 120-225 123-240 (311)
79 2bk6_A Non-heme iron-containin 69.2 28 0.00095 28.5 9.0 86 119-214 46-143 (156)
80 1tjo_A Iron-rich DPSA-homolog 69.0 34 0.0012 28.8 9.7 124 78-214 25-163 (182)
81 2wlu_A DPS-like peroxide resis 68.6 28 0.00095 29.3 9.1 87 118-214 64-162 (175)
82 2fjc_A Antigen TPF1; mini ferr 68.3 32 0.0011 28.2 9.2 128 74-214 5-147 (156)
83 1vjx_A Putative ferritin-like 67.3 9 0.00031 31.4 5.6 127 81-220 17-152 (157)
84 3kwo_A Putative bacterioferrit 66.4 43 0.0015 27.3 9.6 88 117-214 41-139 (152)
85 4eve_A Neutrophil-activating p 66.4 41 0.0014 28.0 9.6 86 117-214 58-156 (164)
86 1zpy_A Hypothetical protein NE 66.3 32 0.0011 27.1 8.2 54 81-140 21-74 (95)
87 2c2u_A DPS, DNA-binding stress 66.2 29 0.00099 30.4 8.9 112 90-214 71-194 (207)
88 2xgw_A Peroxide resistance pro 64.9 34 0.0012 29.7 9.1 87 118-214 80-178 (199)
89 1h0o_A Ribonucleoside-diphosph 63.7 7.6 0.00026 37.4 5.1 99 121-224 165-281 (390)
90 2fzf_A Hypothetical protein; s 63.3 61 0.0021 26.5 10.9 64 73-141 99-162 (175)
91 2oc5_A Hypothetical protein; D 61.2 38 0.0013 30.4 8.6 121 91-226 46-174 (244)
92 1jk0_B RNR Y4, ribonucleoside- 60.3 28 0.00097 32.7 8.2 105 119-225 117-235 (345)
93 1jk0_A RNR Y2, ribonucleoside- 58.3 18 0.00063 35.2 6.7 98 121-224 191-307 (419)
94 3olj_A Ribonucleoside-diphosph 56.2 23 0.00078 32.4 6.7 136 78-224 58-216 (286)
95 2clb_A DPS-like protein; DI-ir 54.8 97 0.0033 26.1 14.0 129 80-226 26-168 (188)
96 2z90_A Starvation-inducible DN 52.4 71 0.0024 26.3 8.6 85 119-214 56-151 (161)
97 1vjx_A Putative ferritin-like 51.0 51 0.0018 26.7 7.5 55 81-140 102-156 (157)
98 4a58_A Ribonucleoside-diphosph 49.4 84 0.0029 29.2 9.5 138 76-226 65-226 (324)
99 2pyb_A NAPA, neutrophil activa 47.4 13 0.00044 30.4 3.2 86 119-214 43-140 (151)
100 2c2j_A DNA-binding stress resp 46.7 83 0.0028 27.6 8.5 86 118-214 84-180 (211)
101 3qhb_A Symerythrin, ORF180; fo 46.3 32 0.0011 29.8 5.6 121 81-215 26-166 (179)
102 3fse_A Two-domain protein cont 45.0 88 0.003 29.7 9.0 100 99-208 226-331 (365)
103 2yw6_A DNA protection during s 41.8 1.2E+02 0.0041 25.6 8.6 85 119-214 54-149 (183)
104 2e0z_A Virus-like particle; ba 39.4 6.3 0.00021 37.6 0.0 72 64-141 5-76 (345)
105 4dr0_A Ribonucleoside-diphosph 37.3 1.2E+02 0.004 28.6 8.4 100 121-226 113-235 (350)
106 2oh3_A Rubrerythrin, COG1633: 33.9 1.9E+02 0.0064 23.4 8.4 59 79-142 93-151 (167)
107 2hz8_A De novo designed DIIRON 32.3 68 0.0023 26.0 5.1 54 81-141 34-88 (115)
108 3ez0_A Uncharacterized protein 30.1 45 0.0015 30.1 4.0 59 79-143 15-74 (225)
109 1za0_A Possible acyl-[acyl-car 30.1 34 0.0012 31.6 3.3 64 119-196 182-245 (275)
110 3ak8_A DNA protection during s 27.2 2.6E+02 0.0088 22.9 10.2 83 119-214 66-159 (167)
111 1o9i_A Pseudocatalase; oxidore 23.8 1.6E+02 0.0054 27.0 6.6 66 80-151 137-202 (266)
112 2cf7_A DPR; peroxide resistanc 23.7 3E+02 0.01 22.5 14.4 86 119-214 55-152 (165)
113 2ouf_A Hypothetical protein; s 22.8 69 0.0024 25.2 3.4 25 157-181 30-54 (94)
114 2v8t_A Manganese-containing ps 22.7 3.3E+02 0.011 25.3 8.7 68 79-151 143-212 (302)
115 2uw1_A Desaturase, plastid del 22.3 56 0.0019 31.1 3.3 19 121-139 199-217 (338)
116 3sm4_A Exonuclease; homologous 22.1 87 0.003 27.5 4.4 30 117-146 196-226 (229)
117 3u52_C Phenol hydroxylase comp 20.9 2.6E+02 0.0088 26.1 7.6 137 84-227 123-274 (333)
No 1
>3uno_A Probable bacterioferritin BFRB; ferroxidase activity, iron storage, oxidoreductase; 2.50A {Mycobacterium tuberculosis} PDB: 3oj5_A 3qd8_A
Probab=96.93 E-value=0.0061 Score=53.42 Aligned_cols=137 Identities=18% Similarity=0.141 Sum_probs=93.9
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCC--CCCCccchhhHHH
Q 022031 79 SRQAIVHSLAHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSS--YGALPAHDGLWDS 156 (303)
Q Consensus 79 ~ra~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~--YGd~P~H~gLW~~ 156 (303)
.-...|-...+.|+.|++..+-..+=|.. .++| .|-.=|.+.|.||-.|...+.+|+..+|.. +.+++.-..=|..
T Consensus 10 ~v~~~LN~qi~~El~As~~Yl~~a~~f~~-~~l~-g~a~~f~~~A~EE~~HA~~l~~~i~~rGG~~~l~~i~~p~~~~~s 87 (189)
T 3uno_A 10 KFHALMQEQIHNEFTAAQQYVAIAVYFDS-EDLP-QLAKHFYSQAVEERNHAMMLVQHLLDRDLRVEIPGVDTVRNQFDR 87 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCCCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CChH-HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCCCCccchH
Confidence 45788899999999999999988777743 3443 555556688999999999999999999975 4555443333543
Q ss_pred HHhhhhhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHHHHHHH
Q 022031 157 AIATSKDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWFRYLCL 226 (303)
Q Consensus 157 a~~T~~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf~~lc~ 226 (303)
..+.... -+.+|..--..-..+++.....+|..+.+.|+. |+.||+.|++.=...+..++.
T Consensus 88 ~~e~le~--------aL~~Ek~v~~~l~~l~~la~~~~D~~t~~fLe~-fL~EQve~~~~l~~~l~~l~~ 148 (189)
T 3uno_A 88 PREALAL--------ALDQERTVTDQVGRLTAVARDEGDFLGEQFMQW-FLQEQIEEVALMATLVRVADR 148 (189)
T ss_dssp HHHHHHH--------HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH--------HHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 3221111 112233321222235666677899999999995 799999999766566666654
No 2
>2qqy_A Sigma B operon; dodecameric alpha-helical, ferritin fold, structural genomic protein structure initiative; 2.00A {Bacillus anthracis str}
Probab=96.87 E-value=0.052 Score=43.52 Aligned_cols=127 Identities=17% Similarity=0.046 Sum_probs=82.6
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCCC----CCCccchhhHHH
Q 022031 81 QAIVHSLAHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSSY----GALPAHDGLWDS 156 (303)
Q Consensus 81 a~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~Y----Gd~P~H~gLW~~ 156 (303)
+..|-..-..|+.|+....-..+.+.+ .+++ ++..=+-+.+.+|..|...+.+|+..+|..- +.++. |..
T Consensus 12 ~~~Ln~~l~~E~~a~~~Y~~~a~~~~~-~~~~-~l~~~f~~~a~ee~~Ha~~l~e~i~~lgg~p~~~~~~~~~----~~~ 85 (149)
T 2qqy_A 12 IEGLNEDLAGEYSAIIMYNHNAATVSG-IYRQ-VLKPFFESEISDEQGHALYLAEKIKTLGGTPTTIPLRVKQ----AED 85 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCS-TTHH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCC----CSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcC-CChH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCCCCCCC----CCC
Confidence 455555666999999999999888842 2222 4555566889999999999999999999641 21221 111
Q ss_pred HHhhhhhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHHHHHHH
Q 022031 157 AIATSKDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWFRYLCL 226 (303)
Q Consensus 157 a~~T~~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf~~lc~ 226 (303)
..+.+.. -+-.|......-..+++.....||..+.++|+. |+.||..|+ .||+.+..
T Consensus 86 ----~~e~l~~----~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~-~~~eee~h~----~~l~~~l~ 142 (149)
T 2qqy_A 86 ----VREMLEY----ARQSEYETIKRYEKRKEQAANLNMTELVVKLED-MIADETNHM----EELDRLLN 142 (149)
T ss_dssp ----HHHHHHH----HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHH----HHHHHHHC
T ss_pred ----HHHHHHH----HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHH----HHHHHHhc
Confidence 1111111 123344333333445666666899999999995 799999998 45655533
No 3
>1krq_A Ferritin; H-chain like four-helix bundle, binding protein; 2.70A {Campylobacter jejuni} SCOP: a.25.1.1
Probab=96.77 E-value=0.0048 Score=52.35 Aligned_cols=135 Identities=14% Similarity=0.055 Sum_probs=91.8
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCC--CCCCccchhhHHHH
Q 022031 80 RQAIVHSLAHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSS--YGALPAHDGLWDSA 157 (303)
Q Consensus 80 ra~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~--YGd~P~H~gLW~~a 157 (303)
-...|....+.|++|+...+-...=|.. .++| .|-.=+.+.|.||-.|...+.+++..+|.. +.+++.-..-|...
T Consensus 6 ~~~~Ln~~i~~El~A~~~Yl~~a~~~~~-~gl~-~~a~~f~~~a~eE~~HA~~l~~~i~~~gG~~~l~~i~~p~~~~~~~ 83 (167)
T 1krq_A 6 VVKLLNEQINKEMYAANLYLSMSSWCYE-NSLD-GAGAFLFAHASEESDHAKKLITYLNETDSHVELQEVKQPEQNFKSL 83 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCH-HHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCCCCCCCCCSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhH-cCcH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCCCCCcCCH
Confidence 4567788888999999999877766643 3555 355555678999999999999999999986 34433333334221
Q ss_pred HhhhhhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHHHHHH
Q 022031 158 IATSKDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWFRYLC 225 (303)
Q Consensus 158 ~~T~~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf~~lc 225 (303)
.. -+. . -+.+|..-...-+.+++..+..||..+...|+. ++.||+.|++.=...+..+.
T Consensus 84 ~e---~l~--~---al~~E~~~~~~~~~l~~~a~~~~D~~~~~~l~~-~l~Eq~e~~~~l~~~l~~l~ 142 (167)
T 1krq_A 84 LD---VFE--K---TYEHEQFITKSINTLVEHMLTHKDYSTFNFLQW-YVSEQHEEEALFRGIVDKIK 142 (167)
T ss_dssp HH---HHH--H---HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHTHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred HH---HHH--H---HHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 11 111 1 123344433334567777778899999999996 89999999865445555553
No 4
>1rcd_A L ferritin; iron storage; 2.00A {Rana catesbeiana} SCOP: a.25.1.1 PDB: 1rcg_A 1rci_A 1rcc_A 1rce_A
Probab=96.74 E-value=0.025 Score=48.32 Aligned_cols=138 Identities=13% Similarity=0.120 Sum_probs=92.5
Q ss_pred hHHHHHHHHHHhhHHHHHHHHHHHHHhcCCC-CCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCC--CCCCccc-hhh
Q 022031 78 QSRQAIVHSLAHTESWAIDLSWDIVARFGKQ-EAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSS--YGALPAH-DGL 153 (303)
Q Consensus 78 ~~ra~lLHaiAHIE~~AIdLa~Dav~RF~~~-~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~--YGd~P~H-~gL 153 (303)
..-...|....+.|+.|+...+-...=|... .++| .|..=+.+.|.||-.|...+.+|+..+|.. +.+++.- ..=
T Consensus 11 ~~v~~~LN~qi~~El~as~~Yl~~a~~~~~~~~~l~-g~a~~f~~~s~EE~~HA~~l~~~i~~rgg~~~l~~i~~p~~~~ 89 (173)
T 1rcd_A 11 QDCEAGLNRTVNLKFHSSYVYLSMASYFNRDDVALS-NFAKFFRERSEEEKEHAEKLIEYQNQRGGRVFLQSVEKPERDD 89 (173)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCCSCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCCCCccc
Confidence 4568889999999999999999887767431 2344 555556678999999999999999999985 5666543 222
Q ss_pred HHHHHhh-hhhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHH-hhcchhhhhhHHhhhHHHHHHHH
Q 022031 154 WDSAIAT-SKDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLE-TVVYPEEITHCAAGVRWFRYLCL 226 (303)
Q Consensus 154 W~~a~~T-~~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~-~iI~~DEI~HV~~G~rWf~~lc~ 226 (303)
|...... ..+| .+|..-...--.+++.....+|..+...|+ . |+.||+.|++.=...+..+..
T Consensus 90 ~~~~~e~le~aL---------~~E~~v~~~l~~l~~~a~~~~D~~t~~fLe~~-~l~eq~e~~~~l~~~l~~l~~ 154 (173)
T 1rcd_A 90 WANGLEALQTAL---------KLQKSVNQALLDLHAVAADKSDPHMTDFLESP-YLSESVETIKKLGDHITSLKK 154 (173)
T ss_dssp CCSHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 3221111 0112 223222222223556666789999999998 6 699999999654455555543
No 5
>2cih_A Ferritin heavy chain; apoferritin, ferroxidase, DI-iron non-heme protein, iron storage, iron, metal-binding, oxidoreductase, phosphorylation; 1.5A {Homo sapiens} PDB: 2chi_A 2cei_A 1fha_A 2fha_A 2cn7_A 2iu2_A 2clu_A 2cn6_A 3ajo_A 3ajq_A 3ajp_A 3erz_A 3es3_A 2z6m_A 1r03_A
Probab=96.69 E-value=0.02 Score=49.59 Aligned_cols=138 Identities=14% Similarity=0.169 Sum_probs=93.2
Q ss_pred hHHHHHHHHHHhhHHHHHHHHHHHHHhcCCC-CCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCC--CCCCccch-hh
Q 022031 78 QSRQAIVHSLAHTESWAIDLSWDIVARFGKQ-EAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSS--YGALPAHD-GL 153 (303)
Q Consensus 78 ~~ra~lLHaiAHIE~~AIdLa~Dav~RF~~~-~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~--YGd~P~H~-gL 153 (303)
..-...|....+.|+.|+.+.+-...=|... .++| .|..=+.+.+.||-.|...+.+++..+|.. +.+++.-. +=
T Consensus 15 ~~~~~~LN~qi~~El~As~~Yl~~a~~~~~~d~~l~-g~a~~f~~~s~EE~~HA~kl~~~i~~rgg~~~l~~i~~p~~~~ 93 (183)
T 2cih_A 15 QDSEAAINRQINLDLYASYVYLSMSYYFDRDDVALK-NFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIQKPDCDD 93 (183)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCCSCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccChH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCCCccc
Confidence 4568899999999999999999877777531 2454 555556678999999999999999999985 66665442 22
Q ss_pred HHHHHhhh-hhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHH-hhcchhhhhhHHhhhHHHHHHHH
Q 022031 154 WDSAIATS-KDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLE-TVVYPEEITHCAAGVRWFRYLCL 226 (303)
Q Consensus 154 W~~a~~T~-~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~-~iI~~DEI~HV~~G~rWf~~lc~ 226 (303)
|....... .+|..=..+.... -.+++.....+|..+...|+ . ++.||+.|++.=...+..+..
T Consensus 94 ~~~~~e~le~aL~~Ek~v~~~l---------~~l~~~a~~~~D~~t~~fLe~~-fl~eq~e~~~~l~~~l~~l~~ 158 (183)
T 2cih_A 94 WESGLNAMECALHLEKNVNQSL---------LELHKLATDKNDPHLCDFIETH-YLNEQVKAIKELGDHVTNLRK 158 (183)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHTTCHHHHHHHHHH-THHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHcCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 43222111 1121111222222 23555556789999999998 5 699999999765556666644
No 6
>2fkz_A Bacterioferritin; ferroxidase, DIIRON site, iron T metal binding protein; HET: HEM; 2.00A {Azotobacter vinelandii} SCOP: a.25.1.1 PDB: 2fl0_A* 1sof_A*
Probab=96.67 E-value=0.12 Score=41.55 Aligned_cols=128 Identities=20% Similarity=0.162 Sum_probs=84.2
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHH-HHHHHHHHHHHHHHHHHHHhCCCC-----CCCccchhhH
Q 022031 81 QAIVHSLAHTESWAIDLSWDIVARFGKQEAMPREFFTDFV-KVAQDEGRHFTLLAARLEELGSSY-----GALPAHDGLW 154 (303)
Q Consensus 81 a~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl-~VA~DEarHF~Ll~~rL~eLG~~Y-----Gd~P~H~gLW 154 (303)
...|-..-..|+.|+....-..+.+.+ .+++ . +..|+ +.+.||..|...+.+|+..+|..- ..++.-...
T Consensus 8 ~~~Ln~~l~~E~~a~~~Y~~~a~~~~~-~~~~-~-l~~~f~~~a~eE~~Ha~~l~e~i~~lgg~p~~~~~~~~~~~~~~- 83 (155)
T 2fkz_A 8 IQHLNKILGNELIAINQYFLHARMYED-WGLE-K-LGKHEYHESIDEMKHADKLIKRILFLEGLPNLQELGKLLIGEHT- 83 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCH-H-HHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCCCSSH-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-CChH-H-HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCH-
Confidence 455666666899999999888887732 1222 2 33455 899999999999999999999651 111111111
Q ss_pred HHHHhhhhhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHHHHH
Q 022031 155 DSAIATSKDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWFRYL 224 (303)
Q Consensus 155 ~~a~~T~~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf~~l 224 (303)
.+.+. .-+-.|......-..+++.....||..++++|+. |..||..|+..=..++..+
T Consensus 84 -------~e~l~----~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~-~~~eee~h~~~l~~~l~~i 141 (155)
T 2fkz_A 84 -------KEMLE----CDLKLEQAGLPDLKAAIAYCESVGDYASRELLED-ILESEEDHIDWLETQLDLI 141 (155)
T ss_dssp -------HHHHH----HHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred -------HHHHH----HHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 12221 1123444444444456667777899999999995 7899999987655665555
No 7
>1eum_A Ferritin 1; ECFTNA, metal binding protein; 2.05A {Escherichia coli} SCOP: a.25.1.1
Probab=96.66 E-value=0.0084 Score=50.66 Aligned_cols=135 Identities=13% Similarity=-0.008 Sum_probs=92.2
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCC--CCCCccchhhHHHH
Q 022031 80 RQAIVHSLAHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSS--YGALPAHDGLWDSA 157 (303)
Q Consensus 80 ra~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~--YGd~P~H~gLW~~a 157 (303)
-...|....+.|+.|+...+-...=|.+ .++| .|-.=+.+.|.||-.|...+.+++..+|.. ..+++.-..-|...
T Consensus 6 ~~~~LN~~i~~El~A~~~Yl~~a~~~~~-~gl~-~~a~~f~~~a~eE~~HA~~l~~~i~~~gg~~~l~~i~~p~~~~~~~ 83 (165)
T 1eum_A 6 MIEKLNEQMNLELYSSLLYQQMSAWCSY-HTFE-GAAAFLRRHAQEEMTHMQRLFDYLTDTGNLPRINTVESPFAEYSSL 83 (165)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCCCCSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCcH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCCCCCCCCH
Confidence 4677888899999999999877776742 4565 455566678999999999999999999986 33433222234221
Q ss_pred HhhhhhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHHHHHH
Q 022031 158 IATSKDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWFRYLC 225 (303)
Q Consensus 158 ~~T~~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf~~lc 225 (303)
.. -+. .| +-+|..--..-+.+++..+..||..+...|+. ++.||+.|++.=...+..+.
T Consensus 84 ~e---~l~--~a---l~~E~~~~~~~~~l~~~a~~~~D~~~~~fl~~-~l~eq~e~~~~l~~~l~~l~ 142 (165)
T 1eum_A 84 DE---LFQ--ET---YKHEQLITQKINELAHAAMTNQDYPTFNFLQW-YVSEQHEEEKLFKSIIDKLS 142 (165)
T ss_dssp HH---HHH--HH---HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred HH---HHH--HH---HHHHHHHHHHHHHHHHHHHHcCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 11 111 11 12333333334557777778899999999995 79999999976555555553
No 8
>2y3q_A Bacterioferritin; metal binding protein, redox; HET: HEM; 1.55A {Escherichia coli} PDB: 1bfr_A* 1bcf_A* 2htn_A* 2vxi_A* 3e1j_A* 3e1l_A* 3e1m_A* 3e1n_A* 3e1o_A* 3e1p_A* 3ghq_A* 3e1q_A* 3e2c_A* 3isf_A* 3is8_A* 3ise_A* 3is7_A*
Probab=96.64 E-value=0.03 Score=45.65 Aligned_cols=131 Identities=16% Similarity=0.055 Sum_probs=86.5
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCCCC--CCccc-hhhHHHH
Q 022031 81 QAIVHSLAHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSSYG--ALPAH-DGLWDSA 157 (303)
Q Consensus 81 a~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~YG--d~P~H-~gLW~~a 157 (303)
+..|-..-..|+.|+....-..+.|.+ .++| .+..=+-+.+.+|..|...+.+|+..+|..-- .++.- .+
T Consensus 8 ~~~Ln~~l~~E~~a~~~Y~~~a~~~~~-~~~~-~l~~~f~~~a~ee~~Ha~~l~e~i~~lgg~p~~~~~~~~~~~----- 80 (158)
T 2y3q_A 8 INYLNKLLGNELVAINQYFLHARMFKN-WGLK-RLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLGKLNIG----- 80 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCCC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh-cCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCCCCcCCCC-----
Confidence 455666667999999999999888842 3444 56666778999999999999999999986421 11111 01
Q ss_pred HhhhhhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHHHHH
Q 022031 158 IATSKDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWFRYL 224 (303)
Q Consensus 158 ~~T~~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf~~l 224 (303)
.|+..=|. .-+-.|......-..+++.....||..+.++|+. |..||..|+..=..++..+
T Consensus 81 ----~~~~e~l~-~~l~~E~~~~~~y~~~~~~a~~~~D~~t~~~l~~-~~~ee~~h~~~l~~~l~~l 141 (158)
T 2y3q_A 81 ----EDVEEMLR-SDLALELDGAKNLREAIGYADSVHDYVSRDMMIE-ILRDEEGHIDWLETELDLI 141 (158)
T ss_dssp ----SSHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred ----CCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 11111111 1123444444444456666667899999999995 7999999986544444444
No 9
>3qz3_A Ferritin; structural genomics, the center for structural genomics of I diseases, csgid, cytoplasmic, oxidoreductase; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: a.25.1.1
Probab=96.59 E-value=0.015 Score=50.43 Aligned_cols=138 Identities=15% Similarity=0.048 Sum_probs=97.9
Q ss_pred hHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCC--CCCCccchhhHH
Q 022031 78 QSRQAIVHSLAHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSS--YGALPAHDGLWD 155 (303)
Q Consensus 78 ~~ra~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~--YGd~P~H~gLW~ 155 (303)
..-...|....+.|+.|+...+-..+=|.+ .++| .|-.=|.+.|.||-.|...+.+|+..+|.. +.+++.-..-|.
T Consensus 13 ~~v~~~LN~qin~EL~as~~Yl~~a~~f~~-~~l~-g~a~~f~~~a~EE~~HA~~l~~~i~~~Gg~~~l~~i~~p~~~~~ 90 (184)
T 3qz3_A 13 QAMVEHLNEQINLEFFSSNLYLQMSAWCED-KGFD-GAAEFLRAHAVEEMQHMQRLFTYVSETGALPILGAIAAPRHDFA 90 (184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cChH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcccCCCCCcccCcC
Confidence 356788889999999999999888777742 3343 455555678999999999999999999974 667766555564
Q ss_pred HHHhhhh-hHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHHHHHHHh
Q 022031 156 SAIATSK-DLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWFRYLCLR 227 (303)
Q Consensus 156 ~a~~T~~-dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf~~lc~~ 227 (303)
...+... +|..=..+..... .+++.....+|..+...|+. ++.|++.|++.=...+..++.-
T Consensus 91 ~~~e~le~aL~~Ek~v~~~l~---------~l~~la~~~~D~~t~~fLe~-fl~EQve~~~~l~~~l~~l~~~ 153 (184)
T 3qz3_A 91 SLGEVFRETYQHEQKITQQIN---------KLAHVAFTSQDYSTFNFLQW-YVAEQHEEEKLFKGILDKLELV 153 (184)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHCCCHhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHh
Confidence 3332211 2222222333233 35556667899999999995 7999999998777777777653
No 10
>4am5_A Bacterioferritin; metal binding protein, ferroxidase centre, iron storage, DI centre, iron channel, heme binding; HET: HEM; 1.58A {Blastochloris viridis} PDB: 4am2_A* 4am4_A*
Probab=96.52 E-value=0.014 Score=48.72 Aligned_cols=128 Identities=13% Similarity=0.114 Sum_probs=84.6
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCC--CCCCccchhhHHHH
Q 022031 80 RQAIVHSLAHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSS--YGALPAHDGLWDSA 157 (303)
Q Consensus 80 ra~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~--YGd~P~H~gLW~~a 157 (303)
-+.+|-..-..|+.|++..+-...-|.+ .++ ..|..=+.+.|.+|-.|...+.+|+..+|.. +++++... .|+..
T Consensus 7 vi~~LN~~l~~El~A~~~Y~~~a~~~~~-~g~-~~~a~~f~~~a~eE~~HA~~l~~~i~~lGG~p~~~~~~~~~-~~~~~ 83 (159)
T 4am5_A 7 VIEYLNRGLRSELTAVSQYWLHYRMLED-WGY-KDLAKKWRAESIEEMAHADKFVERILFLEGLPNLQTLDPLR-IGQTV 83 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTC-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSBCCCCC-CCSSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCc-HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCccccccccc-cchhH
Confidence 4556666667899999999766555521 122 2355556678999999999999999999985 44443322 23222
Q ss_pred Hhh-hhhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHHHHH
Q 022031 158 IAT-SKDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWFRYL 224 (303)
Q Consensus 158 ~~T-~~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf~~l 224 (303)
.+. ..++ -+|....+.=+.+++-.+..||..++++|+. |+.||..|+ .||...
T Consensus 84 ~e~l~~~l---------~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~-il~eEeeH~----~~l~~~ 137 (159)
T 4am5_A 84 KEVLESDL---------AAEREARALYQEGAAYAASVGDFPSKNLFEE-LMGDEEHHI----DFLETQ 137 (159)
T ss_dssp HHHHHHHH---------HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHH----HHHHHH
T ss_pred HHHHHHHH---------HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHH----HHHHHH
Confidence 211 0122 2333333334456778888999999999995 799999998 466544
No 11
>2inc_A Toluene, O-xylene monooxygenase oxygenase subunit; DIIRON, 4-helix bundle, carboxylate bridge, metalloenzyme, oxidoreductase; HET: P6G; 1.85A {Pseudomonas stutzeri} SCOP: a.25.1.2 PDB: 2ind_A* 1t0q_A 1t0r_A 1t0s_A 3n1z_A* 3rnf_A* 3n20_A* 3rnc_A 3rn9_A* 3n1x_A 3rne_A 2rdb_A* 3n1y_A* 3rnb_A 3rng_A 3rna_A
Probab=96.48 E-value=0.011 Score=59.26 Aligned_cols=140 Identities=16% Similarity=-0.004 Sum_probs=96.8
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCCCCCCccc-------hhh
Q 022031 81 QAIVHSLAHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSSYGALPAH-------DGL 153 (303)
Q Consensus 81 a~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~YGd~P~H-------~gL 153 (303)
..++=++.|-|+.|.--...+ .|+. .-..=..--+..+.||.||..+..-++.+|+.....++-+ +-.
T Consensus 93 k~~~~~~~~~Ey~a~~~~a~~-~r~a----p~~~~rnaaa~q~lDElRHaQ~~~~~~~el~~~~~~~~~f~~~~~~~~p~ 167 (491)
T 2inc_A 93 QLHFGAIALEEYAASTAEARM-ARFA----KAPGNRNMATFGMMDENRHGQIQLYFPYANVKRSRKWDWAHKAIHTNEWA 167 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HHHC----SCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGCGGGGHHHHGGGSCCHH
T ss_pred HHHHhhhhHHHHHHHHHHHHH-HHhC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhhhcccccHHHhhcCcc
Confidence 334457789999999988877 6773 2233333445678899999999999999988876655532 224
Q ss_pred HHHHHhhh------hhHHHHHHHhhhhHhhcCCCCCH---HHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHHHHH
Q 022031 154 WDSAIATS------KDLLARLAIEHCVHEARGLDVLP---TTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWFRYL 224 (303)
Q Consensus 154 W~~a~~T~------~dllaRmAvvp~vlEArGLD~~p---~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf~~l 224 (303)
|+.+.+.. +|...-+..+.+|+|.- =-|. .+++--...||..+..++.. |..||-.|++.|...++++
T Consensus 168 ~~~~R~~~ed~~~t~D~~E~~ialnlv~E~~--~tnll~~~f~~~Aa~nGD~lt~~v~~s-iq~DEaRH~~~g~~ll~~l 244 (491)
T 2inc_A 168 AIAARSFFDDMMMTRDSVAVSIMLTFAFETG--FTNMQFLGLAADAAEAGDHTFASLISS-IQTDESRHAQQGGPSLKIL 244 (491)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHCCCCCCCT--THHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHTTHHHHHHHH
T ss_pred cHHHHHHHHHhhccccHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHcCChhHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 44444433 33355555556666541 0111 13445557899999999995 7999999999999999999
Q ss_pred HHhc
Q 022031 225 CLRS 228 (303)
Q Consensus 225 c~~~ 228 (303)
++..
T Consensus 245 l~d~ 248 (491)
T 2inc_A 245 VENG 248 (491)
T ss_dssp HHTT
T ss_pred HhCc
Confidence 9863
No 12
>3e6s_A Ferritin; iron storage, ferroxidase, oxidoreductase; 1.95A {Pseudo-nitzschia multiseries} SCOP: a.25.1.1 PDB: 3e6r_A
Probab=96.37 E-value=0.021 Score=48.89 Aligned_cols=142 Identities=10% Similarity=-0.002 Sum_probs=96.8
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCC--CCCCccch--hhH
Q 022031 79 SRQAIVHSLAHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSS--YGALPAHD--GLW 154 (303)
Q Consensus 79 ~ra~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~--YGd~P~H~--gLW 154 (303)
.-...|....+.|+.|++..+-..+=|.. .++ ..|-.=+.+.|.||-.|...+.+++..+|.. +.+++.-. .-|
T Consensus 4 ~v~~~LN~qin~El~As~~Yl~ma~~f~~-~~l-~g~a~~f~~~s~EE~~HA~kl~~~i~~rgg~~~l~~i~~p~~~~~~ 81 (168)
T 3e6s_A 4 ELLDLFNRQVTQEFTASQVYLSASIWFDQ-NDW-EGMAAYMLAESAEEREHGLGFVDFANKRNIPIELQAVPAPVSCAEW 81 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTC-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCGGGTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCc-CCc-hHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCcCCCCccccC
Confidence 34678889999999999999987766743 355 3566666688999999999999999999974 67777765 566
Q ss_pred HHHHhhhhhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHHHHHHHhcCCCc
Q 022031 155 DSAIATSKDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWFRYLCLRSRDPA 232 (303)
Q Consensus 155 ~~a~~T~~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf~~lc~~~~~~~ 232 (303)
....+.... -+-+|..--..--.+++-....+|..+...|+. ++.|++.|++.=...+..+.. -|.++
T Consensus 82 ~~~~e~le~--------aL~~Ek~v~~~l~~l~~la~~~~D~~t~~fLe~-fl~eQve~~~~l~~~l~~l~~-~g~~~ 149 (168)
T 3e6s_A 82 SSPEDVWQS--------ILELEQANTRSLLNLAEAASTCHDFAVMAFLNP-FHLQQVNEEDKIGSILAKVTD-ENRTP 149 (168)
T ss_dssp CSHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH-HTTST
T ss_pred CCHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHCCCHhHHHHHHH-HHHHHHHHHHHHHHHHHHHHH-hCCCc
Confidence 544332111 112232211111224555567899999999996 799999999654455555533 34443
No 13
>1s3q_A Ferritin; ferroxidase, four helix bundle, iron storage, metal binding; 2.10A {Archaeoglobus fulgidus} SCOP: a.25.1.1 PDB: 1sq3_A 3kx9_A
Probab=96.31 E-value=0.023 Score=48.62 Aligned_cols=136 Identities=17% Similarity=0.133 Sum_probs=91.5
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCC--CCCCccchhhHHH
Q 022031 79 SRQAIVHSLAHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSS--YGALPAHDGLWDS 156 (303)
Q Consensus 79 ~ra~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~--YGd~P~H~gLW~~ 156 (303)
.-...|....+.|+.|+.+.+-..+=|.+ .++| .|-.=+.+.|.||..|...+.+++..+|.. +.+++.-..=|..
T Consensus 7 ~v~~~LN~qi~~El~as~~Yl~~a~~~~~-~~l~-g~a~~f~~~a~EE~~HA~~l~~~i~~~gg~~~l~~i~~p~~~~~~ 84 (173)
T 1s3q_A 7 KMVEALNRQINAEIYSAYLYLSMASYFDS-IGLK-GFSNWMRVQWQEELMHAMKMFDFVSERGGRVKLYAVEEPPSEWDS 84 (173)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCCCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhH-cChH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCCCCCCCC
Confidence 45778889999999999999987776743 4565 466666678999999999999999999986 4554322222321
Q ss_pred HHhh-hhhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHHHHHHH
Q 022031 157 AIAT-SKDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWFRYLCL 226 (303)
Q Consensus 157 a~~T-~~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf~~lc~ 226 (303)
.... ..+| .+|..-...--.+++.....+|..+...|+. |+.||+.|++.=...++.+..
T Consensus 85 ~~e~le~aL---------~~E~~v~~~~~~l~~~a~~~~D~~t~~fle~-~l~eq~e~~~~l~~~l~~l~~ 145 (173)
T 1s3q_A 85 PLAAFEHVY---------EHEVNVTKRIHELVEMAMQEKDFATYNFLQW-YVAEQVEEEASALDIVEKLRL 145 (173)
T ss_dssp HHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH---------HHHHHHHHHHHHHHHHHHHcCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 1111 0111 2222222222235556666799999999996 799999999765566666643
No 14
>3ka8_A Ferritin, middle subunit; iron storage, DIIRON, iron, metal-binding, oxidoreductase; 1.35A {Rana catesbeiana} SCOP: a.25.1.1 PDB: 3ka9_A 3ka3_A 1mfr_A 3ka4_A 3rbc_A 3re7_A 3rgd_A 4das_A* 3ka6_A 3shx_A 3sh6_A 3se1_A 1bg7_A
Probab=96.21 E-value=0.14 Score=43.95 Aligned_cols=140 Identities=14% Similarity=0.138 Sum_probs=95.2
Q ss_pred hHHHHHHHHHHhhHHHHHHHHHHHHHhcCC-CCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCC--CCCCccc-hhh
Q 022031 78 QSRQAIVHSLAHTESWAIDLSWDIVARFGK-QEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSS--YGALPAH-DGL 153 (303)
Q Consensus 78 ~~ra~lLHaiAHIE~~AIdLa~Dav~RF~~-~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~--YGd~P~H-~gL 153 (303)
..-...|....+.|+.|+++.+-..+=|.. ..++| .|-.=+.+.|.||-.|...+.+++..+|.. +.+++.- .+=
T Consensus 11 ~~v~~~LN~qin~El~As~~Yl~ma~~f~~~d~~l~-g~a~~f~~~s~EE~~HA~kl~~~i~~rgg~~~l~~i~~p~~~~ 89 (176)
T 3ka8_A 11 SDCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALH-NVAEFFKEHSHEEREHAEKFMKYQNKRGGRVVLQDIKKPERDE 89 (176)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCCSCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeeeCcccCCCccc
Confidence 356788999999999999999988777841 12344 555556678999999999999999999974 6666655 333
Q ss_pred HHHHHhhhh-hHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHHHHHHHh
Q 022031 154 WDSAIATSK-DLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWFRYLCLR 227 (303)
Q Consensus 154 W~~a~~T~~-dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf~~lc~~ 227 (303)
|....+... ++..=..+....+ .+++-....+|..+...|+.-++.|++.|++.=...+..++.-
T Consensus 90 ~~~~~e~le~aL~~Ek~v~~~l~---------~l~~la~~~~D~~t~~fLe~~fl~eQve~~~~l~~~l~~l~~~ 155 (176)
T 3ka8_A 90 WGNTLEAMQAALQLEKTVNQALL---------DLHKLATDKVDPHLCDFLESEYLEEQVKHIKRIGDFITNLKRL 155 (176)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHTTCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHHHHHHHHHH---------HHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 433222111 1111111222122 2444555689999999998326999999998777777777664
No 15
>3qb9_A Bacterioferritin, BFR; cytosol, structural genomics, TB structural genomics consort TBSGC, metal binding protein; HET: HEM; 2.11A {Mycobacterium tuberculosis} PDB: 2wtl_A* 3bkn_A*
Probab=96.17 E-value=0.075 Score=44.40 Aligned_cols=133 Identities=17% Similarity=0.076 Sum_probs=86.7
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCCC--CCCccchhhHHHH
Q 022031 80 RQAIVHSLAHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSSY--GALPAHDGLWDSA 157 (303)
Q Consensus 80 ra~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~Y--Gd~P~H~gLW~~a 157 (303)
-+..|-..-..|+.|+...+-..+.|.+ .++| ++-.=+-+.+.+|..|...+.+|+..+|..- .+++.-.. |...
T Consensus 9 ~~~~Ln~~l~~E~~a~~~Y~~~a~~~~~-~~~~-~l~~~f~~~a~eE~~Ha~~l~e~i~~lgg~p~~~~i~~~~~-~~~~ 85 (174)
T 3qb9_A 9 VLRLLNEQLTSELTAINQYFLHSKMQDN-WGFT-ELAAHTRAESFDEMRHAEEITDRILLLDGLPNYQRIGSLRI-GQTL 85 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCC-CSSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhC-CChH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCcccccCCCCCCC-CCCH
Confidence 3555666667999999999988888842 3454 4555566789999999999999999998641 11211111 2111
Q ss_pred HhhhhhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHHHHH
Q 022031 158 IATSKDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWFRYL 224 (303)
Q Consensus 158 ~~T~~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf~~l 224 (303)
.+.+.. -+-.|......-..+++.....||..+.++|+. |+.||..|+..=..+++.+
T Consensus 86 ----~e~l~~----al~~E~~~~~~y~~l~~~a~~~~D~~t~~~l~~-~l~eEe~h~~~l~~~l~~i 143 (174)
T 3qb9_A 86 ----REQFEA----DLAIEYDVLNRLKPGIVMCREKQDTTSAVLLEK-IVADEEEHIDYLETQLELM 143 (174)
T ss_dssp ----HHHHHH----HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred ----HHHHHH----HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 111111 123344433333446666678899999999995 7999999986555555555
No 16
>3pvt_A Phenylacetic acid degradation protein PAAA; protein-protein complex, ferritin-like fold, bacterial multi monooxygenase, structural genomics; HET: 3HC; 2.03A {Escherichia coli} PDB: 3pvr_A* 3pvy_A* 3pw1_A* 3pw8_C* 3pwq_C
Probab=96.14 E-value=0.0013 Score=62.37 Aligned_cols=140 Identities=16% Similarity=0.116 Sum_probs=84.1
Q ss_pred CCCCCCCCCCHhHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHH--hHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 022031 67 LMPKLGKAGSLQSRQAIVHSLAHTESWAIDLSWDIVARFGKQEAMPREFFT--DFVKVAQDEGRHFTLLAARLEELGSSY 144 (303)
Q Consensus 67 ~~p~r~~~~t~~~ra~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~--Dwl~VA~DEarHF~Ll~~rL~eLG~~Y 144 (303)
-||..-. ..-+.+|-.+||-|+-+. +|...--.+-..-.. =...++.||..|+++|..+|+++|.+=
T Consensus 24 ~mP~~Yr----~~L~~ll~~laD~ELi~~-------~rl~ew~~~AP~Lee~iALa~ia~DE~GHa~~l~~~a~~lG~d~ 92 (311)
T 3pvt_A 24 WMPDAYR----KTLIRQIGQHAHSEIVGM-------LPEGNWITRAPTLRRKAILLAKVQDEAGHGLYLYSAAETLGCAR 92 (311)
T ss_dssp CCCHHHH----HHHHHHHHHHHHHHHHTH-------HHHHTTGGGCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCH
T ss_pred CCCHHHH----HHHHHHHHHHhhhHHHHH-------HHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Confidence 4666421 356778888888888765 444321112222222 467899999999999999999998631
Q ss_pred CCC--ccchh------hHHHHHhhhhhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHh
Q 022031 145 GAL--PAHDG------LWDSAIATSKDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCAA 216 (303)
Q Consensus 145 Gd~--P~H~g------LW~~a~~T~~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~ 216 (303)
-++ +.+++ |++.-..+-.+.+.|-. +..+.+.+ ....|....|..-++++.+ |+.||--|+..
T Consensus 93 d~l~~~~r~~~~~~~~lfe~P~~dWad~vvr~~----l~D~~a~~----~~~~L~~ss~~plA~~a~k-i~kEE~yH~~~ 163 (311)
T 3pvt_A 93 EDIYQKMLDGRMKYSSIFNYPTLSWADIGVIGW----LVDGAAIV----NQVALCRTSYGPYARAMVK-ICKEESFHQRQ 163 (311)
T ss_dssp HHHHHHHHTTSSCCCGGGGSCCCSHHHHHHHHH----HHHHHHHH----HHHTTTTCSBHHHHHHHHH-HHHHHHHHHHH
T ss_pred HHHHHHHhcchhhhhhHHhCCCCCHHHHHHHHH----HHHHHHHH----HHHHHHcCCcHHHHHHHHH-HHHHHHHHHHH
Confidence 000 01111 11100001111222222 22222221 3445667778898999996 79999999999
Q ss_pred hhHHHHHHHH
Q 022031 217 GVRWFRYLCL 226 (303)
Q Consensus 217 G~rWf~~lc~ 226 (303)
|..|++.+|+
T Consensus 164 g~~wv~rL~~ 173 (311)
T 3pvt_A 164 GFEACMALAQ 173 (311)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9999999987
No 17
>3a68_A Sferh-4, ferritin-4, chloroplastic; 4-helix bundle, iron storage, CAGE-like protein, plant, iron, metal-binding, oxidoreductase, plastid; 1.80A {Glycine max} PDB: 3a9q_A
Probab=96.06 E-value=0.72 Score=40.84 Aligned_cols=138 Identities=14% Similarity=0.081 Sum_probs=90.0
Q ss_pred hHHHHHHHHHHhhHHHHHHHHHHHHHhcCCC-CCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCC--CCCCccchhh-
Q 022031 78 QSRQAIVHSLAHTESWAIDLSWDIVARFGKQ-EAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSS--YGALPAHDGL- 153 (303)
Q Consensus 78 ~~ra~lLHaiAHIE~~AIdLa~Dav~RF~~~-~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~--YGd~P~H~gL- 153 (303)
..-...|....+.|+.|+.+.+-...=|... .++| .|..=+.+.+.||-.|...+.+++..+|.. +.+++.-..=
T Consensus 43 ~~v~~~LN~qin~El~As~~Yl~ma~~f~~~~v~l~-g~a~~f~~~s~EE~~HA~kl~~yi~~rGG~~~l~~i~~p~~~~ 121 (212)
T 3a68_A 43 DESESAVNEQINVEYNVSYVYHAMFAYFDRDNVALR-GLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLSDF 121 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCBCCCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcccchH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCCcCCCCCCc
Confidence 4578999999999999999999887777531 1344 555556678999999999999999999985 5565433211
Q ss_pred ----HHHHHh-hhhhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHH-hhcchhhhhhHHhhhHHHHHHHH
Q 022031 154 ----WDSAIA-TSKDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLE-TVVYPEEITHCAAGVRWFRYLCL 226 (303)
Q Consensus 154 ----W~~a~~-T~~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~-~iI~~DEI~HV~~G~rWf~~lc~ 226 (303)
|....+ ...+|..=-.+.... -.+++.....+|..+...|+ . ++.|++.|++.=...+..+..
T Consensus 122 ~~~e~~~~~e~le~aL~~Ek~v~~~l---------~~l~~~A~~~~D~~t~~fLe~~-fL~EQve~~~~l~~~l~~l~~ 190 (212)
T 3a68_A 122 DHADKGDALHAMELALSLEKLTNEKL---------LNLHSVATKNGDVQLADFVETE-YLGEQVEAIKRISEYVAQLRR 190 (212)
T ss_dssp CCTTTCHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHTTCHHHHHHHHHH-THHHHHHHHHHHHHHHHHHHH
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHcCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHh
Confidence 211110 001121111122222 23455556679999999998 6 699999999544444454433
No 18
>2v2p_A Ferritin light chain; metal transport, iron, haemin, apoferritin, iron storage, metal-binding; 1.15A {Equus caballus} PDB: 2v2r_A 2v2m_A 2v2l_A 2v2s_A 2v2o_A 2v2n_A 2za6_A 2v2j_A 2v2i_A 2z5p_A 1dat_A 2g4h_A 1aew_A 3h7g_A 2zg9_X 2zg8_X 3fi6_A 3o7r_A 2w0o_A 1hrs_A* ...
Probab=95.98 E-value=0.12 Score=44.22 Aligned_cols=139 Identities=15% Similarity=0.079 Sum_probs=91.2
Q ss_pred hHHHHHHHHHHhhHHHHHHHHHHHHHhcCCC-CCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCC--CCCCccc-hhh
Q 022031 78 QSRQAIVHSLAHTESWAIDLSWDIVARFGKQ-EAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSS--YGALPAH-DGL 153 (303)
Q Consensus 78 ~~ra~lLHaiAHIE~~AIdLa~Dav~RF~~~-~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~--YGd~P~H-~gL 153 (303)
..-...|....+.|+.|+...+-...=|... .++| .|..=+.+.|.||-.|...+.+++..+|.. +.+++.- ..=
T Consensus 10 ~~v~~~LN~qi~~El~as~~Yl~~a~~~~~~~~~l~-g~a~~f~~~s~EE~~HA~~l~~~i~~rgg~~~l~~i~~p~~~~ 88 (174)
T 2v2p_A 10 TEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALE-GVCHFFRQLAQQKMQGAERLLKMQNQRGGRALFQDLQKPSQDE 88 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCCSCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCccc
Confidence 3568889999999999999999887767421 2344 455555678999999999999999999985 5666543 211
Q ss_pred HHHHHhhh-hhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHHHHHHH
Q 022031 154 WDSAIATS-KDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWFRYLCL 226 (303)
Q Consensus 154 W~~a~~T~-~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf~~lc~ 226 (303)
|....... .+| .+|..-...--.+++.....+|..+...|+.-++.||+.|++.=...+..+..
T Consensus 89 ~~~~~e~le~aL---------~~Ek~v~~~l~~l~~~a~~~~D~~t~~fLe~~~l~eq~e~~~~l~~~l~~l~~ 153 (174)
T 2v2p_A 89 WGTTPDAMKAAI---------VLEKSLNQALLDLHALGSAQADPHLCDFLESHFLDEEVKLIKKMGDHLTNIQR 153 (174)
T ss_dssp CCSHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 32111110 112 22222222222355566678999999999932699999998654455555533
No 19
>1nfv_A Bacterioferritin; 24 subunits in the active molecule, DIIRON HAEM Fe-coproporphyrin III cofactor, iron storage-electron complex; HET: FEC; 1.95A {Desulfovibrio desulfuricans} SCOP: a.25.1.1 PDB: 1nf6_A* 1nf4_A*
Probab=95.83 E-value=0.099 Score=43.92 Aligned_cols=122 Identities=20% Similarity=0.222 Sum_probs=80.6
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCCC--CCC-ccchhhHHHH
Q 022031 81 QAIVHSLAHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSSY--GAL-PAHDGLWDSA 157 (303)
Q Consensus 81 a~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~Y--Gd~-P~H~gLW~~a 157 (303)
+..|-..-..|+.|+...+-..+.|.+ .++| ++..=+-+.+.+|..|...+.+|+..+|..- .++ |+..+
T Consensus 13 ~~~Ln~~l~~E~~a~~~Y~~~a~~~~~-~~~~-~l~~~f~~~a~eE~~Ha~~l~e~i~~lgg~p~~~~~~~~~~~----- 85 (179)
T 1nfv_A 13 IEVLNKARAMELHAIHQYMNQHYSLDD-MDYG-ELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKVVTG----- 85 (179)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-TTBH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSSCCCCS-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc-CCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCcCCCCCcCCCC-----
Confidence 455555666999999999988888842 2343 5555666789999999999999999998641 111 01111
Q ss_pred HhhhhhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHH
Q 022031 158 IATSKDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCA 215 (303)
Q Consensus 158 ~~T~~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~ 215 (303)
.|+..=| -.-+-.|....+.-..+++.....||..+.++|+. |..||..|+.
T Consensus 86 ----~~~~e~l-~~al~~E~~~~~~y~~l~~~a~~~~D~~t~~~l~~-~~~eEe~h~~ 137 (179)
T 1nfv_A 86 ----QAVPVIY-ESDADQEDATIEAYSQFLKVCKEQGDIVTARLFER-IIEEEQAHLT 137 (179)
T ss_dssp ----CCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHH
T ss_pred ----CCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHH
Confidence 1111111 11123454444444456666667899999999995 7899999984
No 20
>2vzb_A Putative bacterioferritin-related protein; DPS, DPSL, iron, oxidative stress, metal transport; 2.30A {Bacteroides fragilis}
Probab=95.75 E-value=0.12 Score=42.56 Aligned_cols=137 Identities=16% Similarity=0.104 Sum_probs=83.5
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCCCCCCccch-hhHHHHH
Q 022031 80 RQAIVHSLAHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSSYGALPAHD-GLWDSAI 158 (303)
Q Consensus 80 ra~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~YGd~P~H~-gLW~~a~ 158 (303)
-+..|-..-..|+.|+....-..+-|.+ .+++ .+..=+-+.+.+|..|...+.+|+..+|..- +.-. .+++.+.
T Consensus 18 ~~~~Ln~~l~~E~~a~~~Y~~~a~~~~~-~~~~-~l~~~f~~~a~ee~~Had~lae~i~~lGg~p---~~~~~~~~~~~~ 92 (170)
T 2vzb_A 18 LIDQLNAALSEEWLAYYQYWVGALVVEG-AMRA-DVQGEFEEHAEEERHHAQLIADRIIELEGVP---VLDPKKWFELAR 92 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCBS-TTHH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC---CCCGGGHHHHCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCcc---CCCHHHHHHhhc
Confidence 4666777778999999999999988842 2232 4555666889999999999999999999541 1111 1122110
Q ss_pred -----hhhhhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHHHHH
Q 022031 159 -----ATSKDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWFRYL 224 (303)
Q Consensus 159 -----~T~~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf~~l 224 (303)
....++..=+.. -+-.|....+.-..+++..... |..++++|+. |+.||..|+..=..++..+
T Consensus 93 ~~~~~~~~~~~~e~l~~-~l~~E~~~~~~~~~~~~~a~~~-D~~t~~~l~~-~~~ee~~h~~~l~~~l~~l 160 (170)
T 2vzb_A 93 CKYDSPTAFDSVSLLNQ-NVSSERCAILRYQEIANFTNGK-DYTTCDIAKH-ILAEEEEHEQDLQDYLTDI 160 (170)
T ss_dssp SCCCCCCSCBHHHHHHH-HHHHHHHHHHHHHHHHHHHTTT-CHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHcc-CHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 000111111111 1123333333333344444445 9999999995 7999999986544444444
No 21
>3bvf_A Ferritin; iron storage, metal-binding, oxidoreductase; 1.50A {Helicobacter pylori} PDB: 3bve_A 3bvi_A 3bvk_A 3bvl_A 3egm_A
Probab=95.60 E-value=0.054 Score=46.54 Aligned_cols=135 Identities=11% Similarity=0.037 Sum_probs=88.6
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCCC--CCCccchhhHHH
Q 022031 79 SRQAIVHSLAHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSSY--GALPAHDGLWDS 156 (303)
Q Consensus 79 ~ra~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~Y--Gd~P~H~gLW~~ 156 (303)
.-...|-...+.|+.|+.+.+-...=|. ..++| .|-.=+.+.|.||..|...+.+|+..+|... .+++.-..=|..
T Consensus 19 ~~~~~LN~~i~~El~a~~~Yl~~a~~~~-~~gl~-~~a~~f~~~a~EE~~HA~~l~e~i~~lGG~p~l~~i~~p~~~~~~ 96 (181)
T 3bvf_A 19 DIIKLLNEQVNKEMNSSNLYMSMSSWCY-THSLD-GAGLFLFDHAAEEYEHAKKLIIFLNENNVPVQLTSISAPEHKFEG 96 (181)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTTCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-hCChH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCCCCCCCC
Confidence 4567788888899999999987655563 34555 4666666889999999999999999999863 333333333322
Q ss_pred HHhhhhhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHHHHH
Q 022031 157 AIATSKDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWFRYL 224 (303)
Q Consensus 157 a~~T~~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf~~l 224 (303)
.... + -.-+.+|..-.+.-+.+++.....||..++..|+. |+.|++.+.+.=...+..+
T Consensus 97 ~~e~----l----e~aL~~E~~~~~~~~~l~~~A~~~~D~~t~~~l~~-~l~eqvEe~~~l~~~l~~l 155 (181)
T 3bvf_A 97 LTQI----F----QKAYEHEQHISESINNIVDHAIKSKDHATFNFLQW-YVAEQHEEEVLFKDILDKI 155 (181)
T ss_dssp HHHH----H----HHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHTHH-HHHHHHHHHHHHHHHHHHH
T ss_pred HHHH----H----HHHHHHHHHHHHHHHHHHHHHHHcCCHhHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 1111 1 01123344433334556777778899999999996 7888777776322444444
No 22
>1jgc_A Bacterioferritin, BFR; iron storage protein, metal binding protein; HET: HEM; 2.60A {Rhodobacter capsulatus} SCOP: a.25.1.1
Probab=95.59 E-value=0.68 Score=37.51 Aligned_cols=131 Identities=15% Similarity=0.096 Sum_probs=84.4
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCCCC--CCc-cchhhHHHH
Q 022031 81 QAIVHSLAHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSSYG--ALP-AHDGLWDSA 157 (303)
Q Consensus 81 a~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~YG--d~P-~H~gLW~~a 157 (303)
+..|-..-..|+.|+....-..+.|.+ .+++ ++..=+-+.+.+|..|...+.+|+..+|..-- .++ +..+
T Consensus 8 ~~~Ln~~l~~E~~a~~~Y~~~a~~~~~-~~~~-~l~~~f~~~a~ee~~Ha~~l~e~i~~lgg~p~~~~~~~~~~~----- 80 (161)
T 1jgc_A 8 IEFLNAALRSELTAISQYWVHFRLQED-WGLA-KMAKKSREESIEEMGHADKIIARILFLEGHPNLQKLDPLRIG----- 80 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCCC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCCCCcCCCC-----
Confidence 445555556899999999988888842 2232 34444667899999999999999999996421 111 1111
Q ss_pred HhhhhhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHHHHH
Q 022031 158 IATSKDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWFRYL 224 (303)
Q Consensus 158 ~~T~~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf~~l 224 (303)
.+..+.+. .-+-.|....+.-..+++.....||..+.++|+. |+.||..|+..=..++..+
T Consensus 81 -~~~~e~l~----~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~-~~~ee~~h~~~l~~~l~~l 141 (161)
T 1jgc_A 81 -EGPRETLE----CDLAGEHDALKLYREARDYCAEVGDIVSKNIFES-LITDEEGHVDFLETQISLY 141 (161)
T ss_dssp -SSHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred -CCHHHHHH----HHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 01112221 1123344333333445556666799999999995 7999999997666666555
No 23
>3kxu_A Ferritin; iron storage protein, disorder, iron, metal binding protein; 1.85A {Homo sapiens} PDB: 3hx2_A 3hx5_A 3hx7_A
Probab=95.42 E-value=0.25 Score=43.18 Aligned_cols=140 Identities=14% Similarity=0.100 Sum_probs=92.3
Q ss_pred hHHHHHHHHHHhhHHHHHHHHHHHHHhcCC-CCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCC--CCCCccch-hh
Q 022031 78 QSRQAIVHSLAHTESWAIDLSWDIVARFGK-QEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSS--YGALPAHD-GL 153 (303)
Q Consensus 78 ~~ra~lLHaiAHIE~~AIdLa~Dav~RF~~-~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~--YGd~P~H~-gL 153 (303)
..-...|....+.|+.|+++.+-..+=|.. ..++| .|..=+.+.+.||-.|...+.+++..+|.. +.+++.-. .=
T Consensus 11 ~~v~~~LN~qin~EL~As~~Ylsma~~f~~~d~~l~-g~a~~f~~~s~EE~~HA~kl~~yi~~rgG~~~l~~i~~p~~~~ 89 (191)
T 3kxu_A 11 TDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALE-GVSHFFRELAEEKREGYERLLKMQNQRGGRALFQDIKKPAEDE 89 (191)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCCSCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCCCCcH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCcCCCCccc
Confidence 356788999999999999999988777741 12344 444444578889999999999999999974 66665544 23
Q ss_pred HHHHHhhhh-hHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHHHHHHHh
Q 022031 154 WDSAIATSK-DLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWFRYLCLR 227 (303)
Q Consensus 154 W~~a~~T~~-dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf~~lc~~ 227 (303)
|....+... +|..=-.|....+ .+++.....+|..+...|+.-++.|++.|++.=..-+..++.-
T Consensus 90 ~~s~~e~le~aL~~Ek~v~~~l~---------~l~~la~~~~D~~t~~fLe~~fL~EQve~i~~l~~~l~~l~~~ 155 (191)
T 3kxu_A 90 WGKTPDAMKAAMALEKKLNQALL---------DLHALGSARTDPHLCDFLETHFLDEEVKLIKKMGDHLTNLHRL 155 (191)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHTTCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHH---------HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 443322111 1111111111111 2445556679999999998326999999987655666666553
No 24
>2jd6_0 Ferritin homolog, ferritin; metal transport, iron, pores, archaeon, entry channels, thermostability, hyperthermophIle, ferroxidase center; 2.75A {Pyrococcus furiosus} PDB: 2jd7_0 2jd8_0 2x17_0
Probab=95.41 E-value=0.13 Score=43.25 Aligned_cols=134 Identities=15% Similarity=0.126 Sum_probs=85.2
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCC--CCCCccchhhHHHH
Q 022031 80 RQAIVHSLAHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSS--YGALPAHDGLWDSA 157 (303)
Q Consensus 80 ra~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~--YGd~P~H~gLW~~a 157 (303)
-+..|-...+.|+.|+.+.+-..+=|. ..+++ .|..=+-+.+.+|..|...+.+|+..+|.. ..+++....-|...
T Consensus 6 ~~~~Ln~~l~~El~a~~~Yl~~a~~~~-~~~~~-~l~~~f~~~a~ee~~had~laeri~~lGg~p~~~~i~~~~~~~~~~ 83 (174)
T 2jd6_0 6 MLKALNDQLNRELYSAYLYFAMAAYFE-DLGLE-GFANWMKAQAEEEIGHALRFYNYIYDRNGRVELDEIPKPPKEWESP 83 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-HTTCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCCCCSSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-hCCch-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCcCcCCH
Confidence 355677777899999998877755552 12333 355555678999999999999999999986 33333333334222
Q ss_pred HhhhhhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHHHHH
Q 022031 158 IATSKDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWFRYL 224 (303)
Q Consensus 158 ~~T~~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf~~l 224 (303)
...-...+ -+|......-..+++.....||..++++|+. |+.||+.|+..=..++..+
T Consensus 84 ~e~l~~~l--------~~E~~~~~~~~~~~~~A~~~~D~~t~~~l~~-~l~eq~e~~~~l~~~l~~l 141 (174)
T 2jd6_0 84 LKAFEAAY--------EHEKFISKSIYELAALAEEEKDYSTRAFLEW-FINEQVEEEASVKKILDKL 141 (174)
T ss_dssp HHHHHHHH--------HHHHHHHHHHHHHHHHHHHTTCHHHHHHTHH-HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH--------HHHHHHHHHHHHHHHHHHHcCCHhHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 11111111 2233222222345666677899999999996 7999999986533444444
No 25
>3gvy_A Bacterioferritin; iron storage, DI-iron, ferroxida activity, heme, metal binding protein; HET: HEM; 2.80A {Rhodobacter sphaeroides} SCOP: a.25.1.1
Probab=95.30 E-value=0.97 Score=36.91 Aligned_cols=131 Identities=15% Similarity=0.063 Sum_probs=78.5
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCCC-C-CCc-cchhhHHHH
Q 022031 81 QAIVHSLAHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSSY-G-ALP-AHDGLWDSA 157 (303)
Q Consensus 81 a~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~Y-G-d~P-~H~gLW~~a 157 (303)
+..|-..-.-|+.|+....-..+.+.+ .+++ .+..=+-+.+.+|..|...+.+|+..||..- + +++ +..+
T Consensus 8 ~~~Ln~~la~E~~a~~~Y~~~a~~~~~-~~~~-~l~~~f~~~a~ee~~Had~l~eri~~lGg~p~~~~~~~~~~~----- 80 (161)
T 3gvy_A 8 IEYLNAALRSELTAVSQYWLHYRLQED-WGFG-SIAHKSRKESIEEMHHADKLIQRIIFLGGHPNLQRLNPLRIG----- 80 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCT-THHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCCC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-CChH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCccCCCCCCCCC-----
Confidence 445555555699999998766666631 1233 4455566889999999999999999999631 1 111 1111
Q ss_pred HhhhhhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHHHHH
Q 022031 158 IATSKDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWFRYL 224 (303)
Q Consensus 158 ~~T~~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf~~l 224 (303)
.|+..-|. .-+-.|....+.-..+++.....||..++++|+. |..||-.|+..=..++.-+
T Consensus 81 ----~~~~e~l~-~~l~~E~~~~~~~~~~~~~A~~~~D~~t~~~l~~-~~~eEe~h~~~l~~~l~~i 141 (161)
T 3gvy_A 81 ----QTLRETLD-ADLAAEHDARTLYIEARDHCEKVRDYPSKMLFEE-LIADEEGHIDYLETQIDLM 141 (161)
T ss_dssp ----SSHHHHHH-HHHHHHHHHHHHHHHHHHHHTTTTCHHHHTTHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred ----CCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 12211111 1112333322222334555567899999999995 7899999985444444433
No 26
>3vnx_A Ferritin; 4-helix bundle, iron storage, oxidoreductase; 2.40A {Ulva pertusa}
Probab=95.16 E-value=1.1 Score=39.36 Aligned_cols=139 Identities=13% Similarity=0.086 Sum_probs=91.5
Q ss_pred hHHHHHHHHHHhhHHHHHHHHHHHHHhcCC-CCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCC--CCCCccchh--
Q 022031 78 QSRQAIVHSLAHTESWAIDLSWDIVARFGK-QEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSS--YGALPAHDG-- 152 (303)
Q Consensus 78 ~~ra~lLHaiAHIE~~AIdLa~Dav~RF~~-~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~--YGd~P~H~g-- 152 (303)
..-...|....+.|++|+++.+-..+=|.. ..++| .|..=+.+.+.||-.|...+.+++..+|.. +.+++.-..
T Consensus 38 ~~v~~~LN~qin~EL~As~~Ylsma~~f~~~d~~l~-g~a~~f~~~s~EE~~HA~kLi~yi~~rGG~~~l~~i~~p~~~~ 116 (204)
T 3vnx_A 38 IECEAAINEQINIEYTISYVYHALHSYFARDNVGLP-GFAKFFKEASDEEREHAHMLMDYQTKRGGRVELKPLAAPEMEF 116 (204)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCCCccc
Confidence 356889999999999999999988777842 12344 455555678999999999999999999974 666655432
Q ss_pred ---hHHHHHhhh-hhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHHHHHHH
Q 022031 153 ---LWDSAIATS-KDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWFRYLCL 226 (303)
Q Consensus 153 ---LW~~a~~T~-~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf~~lc~ 226 (303)
-|....+.. .+|..=-.+....+ .+++-....+|..+...|+.-++.|++.|++.=...+..++.
T Consensus 117 ~~~~~~~~~e~le~aL~~Ek~v~~~l~---------~l~~lA~~~~D~~t~~fLe~~fL~EQve~i~~l~~~l~~l~~ 185 (204)
T 3vnx_A 117 ANDDKGEALYAMELALSLEKLNFQKLQ---------ALQAIADKHKDAALCDFVEGGLLSEQVDAVKEHAVYVSQLRR 185 (204)
T ss_dssp CCTTTCHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHTTCHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 231111110 11111111222222 234444568999999999933699999999765566666654
No 27
>3fvb_A Bacterioferritin; niaid, ssgcid, decode, structural genomics, seattle structural genomics center for infectious disease; HET: HEM; 1.81A {Brucella melitensis biovar ABORTUS2308}
Probab=95.08 E-value=1 Score=38.15 Aligned_cols=130 Identities=14% Similarity=0.036 Sum_probs=80.7
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCC-----CCCCccchhhH
Q 022031 80 RQAIVHSLAHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSS-----YGALPAHDGLW 154 (303)
Q Consensus 80 ra~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~-----YGd~P~H~gLW 154 (303)
-+..|-..-.-|+.|+....-..+.|.+ .++ ..+..=+-+.+.+|..|...+.+|+..+|.. .+.++.-..+-
T Consensus 28 ~~~~LN~~la~E~~a~~~Y~~~a~~~~~-~~~-~~l~~~f~~~a~eE~~Had~laeri~~lGg~p~~~~~~~~~~~~~~~ 105 (182)
T 3fvb_A 28 VIERLNEALFLELGAVNQYWLHYRLLND-WGY-TRLAKKEREESIEEMHHADKLIDRIIFLEGFPNLQTVSPLRIGQNVK 105 (182)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTC-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSBCCCCCCCSSHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCh-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCcCCCCCCCCCCCCHH
Confidence 3455555556799999998888777731 122 2445556688999999999999999999874 22222211122
Q ss_pred HHHHhhhhhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHHHHH
Q 022031 155 DSAIATSKDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWFRYL 224 (303)
Q Consensus 155 ~~a~~T~~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf~~l 224 (303)
++... + +-.|....+.-..+++.....||..++++|+. |+.||..|+..=..++..+
T Consensus 106 e~l~~---~---------l~~E~~~~~~y~~~i~~A~~~~D~~t~~~L~~-il~eEe~h~~~l~~~l~~i 162 (182)
T 3fvb_A 106 EVLEA---D---------LKGEYDARASYKESREICDKLGDYVSKQLFDE-LLADEEGHIDFLETQLDLL 162 (182)
T ss_dssp HHHHH---H---------HHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH---H---------HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 21111 1 12232222222234555567899999999995 6899999975444444333
No 28
>3r2k_A Bacterioferritin, BFR; bacterial ferritin, iron binding, iron storage, iron homeost iron release, iron mobilization; 1.55A {Pseudomonas aeruginosa} SCOP: a.25.1.0 PDB: 3r2h_A 3r2l_A 3r2m_A 3r2o_A 3r2r_A 3r2s_A
Probab=94.87 E-value=1.3 Score=35.95 Aligned_cols=129 Identities=14% Similarity=0.091 Sum_probs=80.8
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCC-CCCCccchhhHHHHHh
Q 022031 81 QAIVHSLAHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSS-YGALPAHDGLWDSAIA 159 (303)
Q Consensus 81 a~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~-YGd~P~H~gLW~~a~~ 159 (303)
+..|-..-.-|+.|+...+-..+.|.+ .++ .++..=+-+.+.+|..|...+.+|+..+|.. -++++-- -|
T Consensus 8 ~~~Ln~~la~E~~a~~~Y~~~a~~~~~-~~~-~~l~~~f~~~a~ee~~had~l~eri~~lGg~p~~~~~~~--~~----- 78 (154)
T 3r2k_A 8 IDYLNTLLTGELAARDQYFIHSRMYED-WGF-SKLYERLNHEMEEETQHADALLRRILLLEGTPRMRPDDI--HP----- 78 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-TTC-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCC--CC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHc-CCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCC--CC-----
Confidence 444555555699999999888777731 122 2344445678999999999999999999874 1122210 01
Q ss_pred hhhhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchh-hhhhHHhhhHHHHHHH
Q 022031 160 TSKDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPE-EITHCAAGVRWFRYLC 225 (303)
Q Consensus 160 T~~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~D-EI~HV~~G~rWf~~lc 225 (303)
..|+..-+. .-+-+|......-..+++.....||..++++|+. |..| |..|+ .||+...
T Consensus 79 -~~~~~e~l~-~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~-~~~e~ee~h~----~~l~~~l 138 (154)
T 3r2k_A 79 -GTTVPEMLE-ADLKLERHVRAALAKGIALCEQHKDFVSRDILKA-QLADTEEDHA----YWLEQQL 138 (154)
T ss_dssp -CSSHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHTHH----HHHHHHH
T ss_pred -CCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHH----HHHHHHH
Confidence 012211111 1123344433333456666777899999999995 6889 99998 4565543
No 29
>3oj5_A Ferritin family protein; ferroxidase, cytosol, oxidoreductase; 2.85A {Mycobacterium tuberculosis} PDB: 3qd8_A
Probab=94.84 E-value=0.23 Score=42.51 Aligned_cols=134 Identities=18% Similarity=0.157 Sum_probs=85.5
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCC--CCCCccchhhHHHH
Q 022031 80 RQAIVHSLAHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSS--YGALPAHDGLWDSA 157 (303)
Q Consensus 80 ra~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~--YGd~P~H~gLW~~a 157 (303)
-+..|-....-|+.|+.+.+-..+=|. ..+++ .|-.=+-+.+.+|..|...+.+|+..+|.. ...++.-..-|...
T Consensus 11 v~~~LN~~la~El~a~~~Yl~~a~~~~-~~gf~-~l~~~f~~~a~ee~~Had~laeri~~lGg~p~~~~i~~~~~~~~~~ 88 (189)
T 3oj5_A 11 FHALMQEQIHNEFTAAQQYVAIAVYFD-SEDLP-QLAKHFYSQAVEERNHAMMLVQHLLDRDLRVEIPGVDTVRNQFDRP 88 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-HTTCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCCCCSSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHc-cCCcH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeecCCCCCCCCCCCCH
Confidence 466777788899999999886544442 23433 455666688999999999999999999986 33333333334221
Q ss_pred HhhhhhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHHHHH
Q 022031 158 IATSKDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWFRYL 224 (303)
Q Consensus 158 ~~T~~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf~~l 224 (303)
.+.-... +-.|....+.-..+++.....||..++++|+. |+.||..|+..=...+..+
T Consensus 89 ~e~l~~~--------l~~E~~~~~~~~~l~~~A~~~~D~~t~~~l~~-~l~eqe~~~~~l~~~l~~l 146 (189)
T 3oj5_A 89 REALALA--------LDQERTVTDQVGRLTAVARDEGDFLGEQFMQW-FLQEQIEEVALMATLVRVA 146 (189)
T ss_dssp HHHHHHH--------HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH--------HHHHHHHHHHHHHHHHHHHHcCCHhHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 1111111 12233322223346666778899999999995 7999999986544444433
No 30
>3uoi_A Bacterioferritin, BFR; structural genomics, TB structural genomics consortium, TBSG ferroxidation and iron storage, cytosol; HET: HEM; 1.90A {Mycobacterium tuberculosis} PDB: 3uof_A* 3qb9_A* 2wtl_A* 3bkn_A*
Probab=94.74 E-value=1.4 Score=35.86 Aligned_cols=129 Identities=21% Similarity=0.138 Sum_probs=79.7
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCC-----CCCCccchhhHH
Q 022031 81 QAIVHSLAHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSS-----YGALPAHDGLWD 155 (303)
Q Consensus 81 a~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~-----YGd~P~H~gLW~ 155 (303)
+..|-..-.-|+.|+....-..+.|.+ .++ .++..=+-+.+.+|..|...+.+|+..+|.. .+.++.-..+=+
T Consensus 10 ~~~Ln~~la~E~~a~~~Y~~~a~~~~~-~~~-~~l~~~f~~~a~ee~~Had~l~e~i~~lGg~p~~~~~~~~~~~~~~~e 87 (161)
T 3uoi_A 10 LRLLNEQLTSELTAINQYFLHSKMQDN-WGF-TELAAHTRAESFDEMRHAEEITDRILLLDGLPNYQRIGSLRIGQTLRE 87 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-TTC-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCCCSSHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-CCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCCCCCCCCCCCHHH
Confidence 455555556799999998877777731 122 2444555678999999999999999999864 111111111111
Q ss_pred HHHhhhhhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHHHHH
Q 022031 156 SAIATSKDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWFRYL 224 (303)
Q Consensus 156 ~a~~T~~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf~~l 224 (303)
+... + +-+|......-..+++.....||..++++|+. |..||..|+..=..++..+
T Consensus 88 ~l~~---~---------l~~E~~~~~~~~~~~~~A~~~~D~~t~~~l~~-~~~eee~h~~~l~~~l~~i 143 (161)
T 3uoi_A 88 QFEA---D---------LAIEYDVLNRLKPGIVMCREKQDTTSAVLLEK-IVADEEEHIDYLETQLELM 143 (161)
T ss_dssp HHHH---H---------HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred HHHH---H---------HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 1111 1 12233322223345666677899999999995 6899999985433444333
No 31
>1j30_A 144AA long hypothetical rubrerythrin; sulerythrin, sulfolobus tokodaii strain 7, FOU bundle, domain swapping, metal binding site plasticity; 1.70A {Sulfolobus tokodaii} SCOP: a.25.1.1
Probab=94.69 E-value=0.26 Score=40.43 Aligned_cols=126 Identities=18% Similarity=0.105 Sum_probs=84.1
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHH--hCCCCCCCccchhhHHHH
Q 022031 80 RQAIVHSLAHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEE--LGSSYGALPAHDGLWDSA 157 (303)
Q Consensus 80 ra~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~e--LG~~YGd~P~H~gLW~~a 157 (303)
-...|-..-.-|+.|++..+-...-+.. .++| ++-.=+.+.|.+|..|...+-++|.. +|..=++.| |.
T Consensus 9 ~~~~Ln~a~~~E~~A~~~Y~~~A~~a~~-~g~~-~~a~~f~~~A~eE~~HA~~~~~~l~~~~lg~p~~~~p-----~~-- 79 (144)
T 1j30_A 9 TAENLKQGFIGESMANRRYLYFAKRADE-EGYP-EIAGLLRSIAEGETAHAFGHLDFIRQGGLTDPATDKP-----IG-- 79 (144)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCBCTTTSCB-----CS--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCHH-HHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCcCCC-----Cc--
Confidence 4556667777899999988666554421 2343 24444557899999999999999998 765212222 21
Q ss_pred HhhhhhHHHHHHHhhhhHhhcC-CCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHHHHHH
Q 022031 158 IATSKDLLARLAIEHCVHEARG-LDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWFRYLC 225 (303)
Q Consensus 158 ~~T~~dllaRmAvvp~vlEArG-LD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf~~lc 225 (303)
.|..-|.. -+-+|..- -+.=|.+++..+..||..++++++. |..+|..|. .||..+-
T Consensus 80 -~~~e~L~~-----al~~E~~~~~~~y~~~~~~A~~egd~~~~~~f~~-i~~~E~~H~----~~~~~~l 137 (144)
T 1j30_A 80 -TLEQMIES-----AIAGETYEWTQMYPGFAKVAREEGFPEVAEWFET-LARAEKSHA----EKFQNVL 137 (144)
T ss_dssp -SHHHHHHH-----HHHHHHHHHHTHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHH----HHHHHHH
T ss_pred -cHHHHHHH-----HHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHH-HHHHHHHHH----HHHHHHH
Confidence 22222221 12345554 3555778899999999999999995 799999997 4565543
No 32
>1otk_A Protein PAAC, phenylacetic acid degradation protein PAAC; structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: a.25.1.2 PDB: 3pvt_B* 3pvr_B* 3pvy_B* 3pw1_B* 3pw8_A* 3pwq_A
Probab=94.60 E-value=0.12 Score=47.60 Aligned_cols=92 Identities=17% Similarity=0.214 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh-CCC------CCC----------CccchhhHHHHHhhhhhHHHHHHHhhhhHhhcCCC
Q 022031 119 FVKVAQDEGRHFTLLAARLEEL-GSS------YGA----------LPAHDGLWDSAIATSKDLLARLAIEHCVHEARGLD 181 (303)
Q Consensus 119 wl~VA~DEarHF~Ll~~rL~eL-G~~------YGd----------~P~H~gLW~~a~~T~~dllaRmAvvp~vlEArGLD 181 (303)
...++.||.-|.+++-.++++| |.. |.- |-.-+|=| .+...|-.++-...
T Consensus 39 lanialDelGhar~ly~~a~~l~G~~~~D~La~~R~~~~frn~~l~e~P~gdw-------a~ti~r~~l~d~~~------ 105 (249)
T 1otk_A 39 LANIGLDLLGQARNFLSYAAELAGEGDEDTLAFTRDERQFSNLLLVEQPNGNF-------ADTIARQYFIDAWH------ 105 (249)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHSCCGGGCCCCGGGGSCCCSH-------HHHHHHHHHHHHHH------
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHhcCHHHhhccHHHcCCCCCH-------HHHHHHHHHHHHHH------
Confidence 5699999999999999999999 853 111 11112333 22333444433221
Q ss_pred CCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHHHHHHH
Q 022031 182 VLPTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWFRYLCL 226 (303)
Q Consensus 182 ~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf~~lc~ 226 (303)
-.....|.+..|..-++|+.+ |..||-=|+..|..|+..+|+
T Consensus 106 --~~~~~~L~~ss~~plA~ia~K-~~kEe~yH~~h~~~w~~rL~~ 147 (249)
T 1otk_A 106 --VALFTRLMESRDPQLAAISAK-AIKEARYHLRFSRGWLERLGN 147 (249)
T ss_dssp --HHHHHHHTTCSSHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT
T ss_pred --HHHHHHHHcCCcHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHc
Confidence 136778999999999999997 799999999999999999985
No 33
>1vlg_A Ferritin; TM1128, structural genomics, JCSG, protein structu initiative, PSI, joint center for structural genomics, META protein; 2.00A {Thermotoga maritima} SCOP: a.25.1.1 PDB: 1z4a_A*
Probab=94.59 E-value=0.28 Score=41.57 Aligned_cols=127 Identities=16% Similarity=0.144 Sum_probs=82.3
Q ss_pred hHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCCC--CCCccchhhHH
Q 022031 78 QSRQAIVHSLAHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSSY--GALPAHDGLWD 155 (303)
Q Consensus 78 ~~ra~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~Y--Gd~P~H~gLW~ 155 (303)
..-+..|-...+.|+.|+.+.+-...=|.+ .++| .|-.=+-+.+.+|..|...+.+|+..+|... .+++.-..=|.
T Consensus 18 ~~~~~~Ln~~l~~El~a~~~Yl~~a~~~~~-~~~~-~la~~f~~~a~EE~~HAd~l~eri~~lGg~~~l~~i~~p~~~~~ 95 (176)
T 1vlg_A 18 EKVRKALNDQLNREIYSSYLYLSMATYFDA-EGFK-GFAHWMKKQAQEELTHAMKFYEYIYERGGRVELEAIEKPPSNWN 95 (176)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCcH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeecCCCCCCCCCCC
Confidence 345777888888999999888654443532 2344 3555556789999999999999999999863 34443333342
Q ss_pred HHHhhhhhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHH
Q 022031 156 SAIATSKDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCA 215 (303)
Q Consensus 156 ~a~~T~~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~ 215 (303)
...+.-... +-+|..-.+.-..+++.....||..++++|+. ++.|++.+..
T Consensus 96 ~~~e~le~~--------l~~E~~v~~~~~~l~~~A~~~~D~~t~~~l~~-~l~eq~ee~~ 146 (176)
T 1vlg_A 96 GIKDAFEAA--------LKHEEFVTQSIYNILELASEEKDHATVSFLKW-FVDEQVEEED 146 (176)
T ss_dssp SHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHH
T ss_pred CHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHcCCHhHHHHHHH-HHHHHHHHHH
Confidence 221111111 12233322223346666778899999999996 7888887776
No 34
>1mty_D Methane monooxygenase hydroxylase; dinuclear iron center monooxygenase; 1.70A {Methylococcus capsulatus str} SCOP: a.25.1.2 PDB: 1mmo_D 1xvb_A 1fyz_A 1fz0_A 1fz2_A 1fz3_A 1fz4_A 1fz5_A 1fz6_A 1fz7_A 1fz8_A 1fz9_A 1fzh_A 1fzi_A 1xmf_A 1xmg_A 1xmh_A 1xu3_A 1xu5_A 1fz1_A ...
Probab=94.51 E-value=0.15 Score=51.18 Aligned_cols=139 Identities=17% Similarity=0.075 Sum_probs=92.6
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCCCCC---Ccc------ch
Q 022031 81 QAIVHSLAHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSSYGA---LPA------HD 151 (303)
Q Consensus 81 a~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~YGd---~P~------H~ 151 (303)
..++=+++|-||.|..-...+ .|+. .-..=..--+..+.||.||......+.++++-.|-| |.- ++
T Consensus 90 k~~l~av~~~EY~a~~~~a~~-~r~a----p~~~~rnaaa~qalDElRHaQ~~~~l~k~~~~~~~dp~Gfd~~r~~~~~~ 164 (512)
T 1mty_D 90 KVVSNFLEVGEYNAIAATGML-WDSA----QAAEQKNGYLAQVLDEIRHTHQCAYVNYYFAKNGQDPAGHNDARRTRTIG 164 (512)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HHHC----CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCTTTTTHHHHGGGS
T ss_pred HHHHcccCHHHHHHHHHHHHH-HHhC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccCCCHHHHHhccC
Confidence 445566789999999966666 7773 233444455677889999999877766777744422 221 12
Q ss_pred hhHHHHHhh------hhhHHHHHHHhhhhHhhc--CCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHHHH
Q 022031 152 GLWDSAIAT------SKDLLARLAIEHCVHEAR--GLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWFRY 223 (303)
Q Consensus 152 gLW~~a~~T------~~dllaRmAvvp~vlEAr--GLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf~~ 223 (303)
-.|+.+.+. ..|...-+..+..|+|.- +|=..+ +++--..+||..+..++.. |..||-.|.+.|..-+++
T Consensus 165 p~~q~~R~~fe~~~~t~D~~E~~valn~v~E~~~tnll~~~-~~~~Aa~nGD~~tptv~~s-iqsDEaRH~~~g~~ll~~ 242 (512)
T 1mty_D 165 PLWKGMKRVFSDGFISGDAVECSLNLQLVGEACFTNPLIVA-VTEWAAANGDEITPTVFLS-IETDELRHMANGYQTVVS 242 (512)
T ss_dssp SHHHHHHHHHTHHHHSSCHHHHHHHHTTTHHHHTHHHHHHH-HHHHHHHTTCCHHHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred CchhhhHHHHHHHhhcCChHHHhhhhhhhHHHHhHHHHHHH-HHHHHHHcCCHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 233333322 135555555567777762 111111 4566678999999999995 799999999999999999
Q ss_pred HHH
Q 022031 224 LCL 226 (303)
Q Consensus 224 lc~ 226 (303)
+++
T Consensus 243 Lle 245 (512)
T 1mty_D 243 IAN 245 (512)
T ss_dssp HTT
T ss_pred HHc
Confidence 976
No 35
>2itb_A TRNA-(MS(2)IO(6)A)-hydroxylase, putative; putative ATTH, structural genomics, joint center for structu genomics, JCSG; 2.05A {Pseudomonas putida} SCOP: a.25.1.7
Probab=94.25 E-value=0.84 Score=40.89 Aligned_cols=137 Identities=15% Similarity=0.182 Sum_probs=95.0
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCCCCCCccchh---hHH
Q 022031 79 SRQAIVHSLAHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSSYGALPAHDG---LWD 155 (303)
Q Consensus 79 ~ra~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~YGd~P~H~g---LW~ 155 (303)
+--.+|-.=||-|.=|---|.-.+.||+. -.+-..-....|.||-.||.++.+.|++-|..||..+.-.+ |-.
T Consensus 27 nl~~iL~DHA~CE~KAA~tAm~Li~rYp~----~~~Lv~~m~~LarEEL~HFeqVl~im~~Rgi~l~~~~~~~Ya~~L~k 102 (206)
T 2itb_A 27 DQETLLIDHKNCEFKAASTALSLIAKYNT----HLDLINMMSRLAREELVHHEQVLRLMKRRGVPLRPVSAGRYASGLRR 102 (206)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHTTT----CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCSHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCC----cHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 45677888899999999999999999974 34566778889999999999999999999999999988764 333
Q ss_pred HHHhh-hhhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHHHHHHHhcC
Q 022031 156 SAIAT-SKDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWFRYLCLRSR 229 (303)
Q Consensus 156 ~a~~T-~~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf~~lc~~~~ 229 (303)
..... .+-++.|+-|-. +-|||+.. --.+|...=|.+-++--. -++.-|.+|... |--++++..
T Consensus 103 ~vr~~ep~~l~D~Llv~A-lIEARSCE----RF~lLa~~l~d~L~~FY~-~Ll~SEArHy~~----yl~LA~~y~ 167 (206)
T 2itb_A 103 LVRAHEPVKLVDTLVVGA-FIEARSCE----RFAALVPHLDEELGRFYH-GLLKSEARHYQG----YLKLAHNYG 167 (206)
T ss_dssp TSCSSTTHHHHHHHHHHH-HHHHHHHH----HHHHHGGGSCHHHHHHHH-HHHHHHHHHHHH----HHHHHHHHS
T ss_pred HccCCChHHHHHHHHHHH-HHHHHhHH----HHHHHHhcCcHHHHHHHH-HHHHHHhhHHHH----HHHHHHHHc
Confidence 32211 145677775554 88999753 222333333444444444 367889999753 334444444
No 36
>3u52_A Phenol hydroxylase component PHN; 4-helix bundle, dioxygen, hydrocarbons, oxidore; HET: MPO EPE; 1.95A {Pseudomonas stutzeri} PDB: 2inn_A 2inp_A
Probab=94.10 E-value=0.31 Score=49.00 Aligned_cols=138 Identities=17% Similarity=0.133 Sum_probs=101.2
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCCCCCC------------
Q 022031 80 RQAIVHSLAHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSSYGAL------------ 147 (303)
Q Consensus 80 ra~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~YGd~------------ 147 (303)
-...+=++.|.|+.| ..+.-.+.||. .......--+=.+.||.||..++...+..|+-.|..|
T Consensus 97 Lk~~l~al~~~EYgA-~~~~a~~~r~~----~g~~~~na~~fqa~DeLRhAQ~~~~~~~~l~~~~~Gf~d~a~~~d~~W~ 171 (511)
T 3u52_A 97 LKLFISGISPLEHAA-FQGYSKVGRQF----SGAGARVACQMQAIDELRHSQTQQHAMSHYNKHFNGLHDGPHMHDRVWY 171 (511)
T ss_dssp HHHHHHHTHHHHHHH-HHHHHHHHHHC----SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCTTHHHHHTTCGG
T ss_pred HHHHhccccHHHHHH-HHHHHHHHHhc----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccChhhhhcCcccc
Confidence 445556889999999 55677788995 4455567777789999999999998888887776555
Q ss_pred --ccchhhHHHHHhhhhhHHHHHHHhhhhHhhc--CCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHHHH
Q 022031 148 --PAHDGLWDSAIATSKDLLARLAIEHCVHEAR--GLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWFRY 223 (303)
Q Consensus 148 --P~H~gLW~~a~~T~~dllaRmAvvp~vlEAr--GLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf~~ 223 (303)
+. ..++|.+. | .|...-+-.+.+|+|.. +|=..+. .+--...||..+..++.. |..||-.|.+.|.-=|+.
T Consensus 172 ~~~~-R~~vEd~~-t-~Dw~E~~vA~nlv~E~l~tnLl~~~~-~~~Aa~nGD~~t~t~~~s-~qsDesRh~~w~~alvk~ 246 (511)
T 3u52_A 172 LSVP-KSFFDDAR-S-AGPFEFLTAISFSFEYVLTNLLFVPF-MSGAAYNGDMATVTFGFS-AQSDEARHMTLGLEVIKF 246 (511)
T ss_dssp GHHH-HHHHHHHH-H-SCHHHHHHHHTTCCCCCCHHHHHHHH-HHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred chhh-HHHHhhcc-c-cCHHHHHHHHHHHHHHHhHHHHHHHH-HHHHHHCCCHhHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 23 55667765 4 47776666667776642 2222222 334456799999998884 799999999999999999
Q ss_pred HHHh
Q 022031 224 LCLR 227 (303)
Q Consensus 224 lc~~ 227 (303)
+.++
T Consensus 247 ~l~~ 250 (511)
T 3u52_A 247 ILEQ 250 (511)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 9764
No 37
>3ge3_A Toluene-4-monooxygenase system protein A; DIIRON hydroxylase, effector protein, T201A, aromatic hydrocarbons catabolism, FAD, flavoprotein; 1.52A {Pseudomonas mendocina} SCOP: a.25.1.2 PDB: 3ge8_A 3dhi_A* 3dhh_A* 3dhg_A* 3i5j_A 3i63_A 3q14_A 3q2a_A* 3q3m_A* 3q3n_A* 3q3o_A* 3rmk_A* 3ri7_A
Probab=93.53 E-value=0.58 Score=46.94 Aligned_cols=141 Identities=18% Similarity=0.122 Sum_probs=97.5
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhH-HHhHHHHHHHHHHHHHHHHHHHHHhCCCCCCCc-----cchh
Q 022031 79 SRQAIVHSLAHTESWAIDLSWDIVARFGKQEAMPREF-FTDFVKVAQDEGRHFTLLAARLEELGSSYGALP-----AHDG 152 (303)
Q Consensus 79 ~ra~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~F-y~Dwl~VA~DEarHF~Ll~~rL~eLG~~YGd~P-----~H~g 152 (303)
.-...+=++.|.|+.|. .+-=.+.|+. |... ..--.=.+.||.||.....-+..+|..++..|- .|+.
T Consensus 92 ~Lk~~~~av~~~Ey~a~-~g~A~~~R~a-----ps~~~rn~~~fQ~~DElRHaQ~q~y~~~~l~~~~~gFd~~~r~~~d~ 165 (500)
T 3ge3_A 92 TLKSHYGAIAVGEYAAV-TGEGRMARFS-----KAPGNRNMATFGMMDELRHGQLQLFFPHEYCKKDRQFDWAWRAYHSN 165 (500)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHHHHHHHC-----SCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCGGGGHHHHGGGSC
T ss_pred HHHHHhcccchHHHHHH-HHHHHHHHhC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcccChHHHHHhCc
Confidence 34566778899999996 4555677883 3333 333344788999999998888888886655543 3445
Q ss_pred hHH--HHHhh------hhhHHHHHHHhhhhHhhc--CCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHHH
Q 022031 153 LWD--SAIAT------SKDLLARLAIEHCVHEAR--GLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWFR 222 (303)
Q Consensus 153 LW~--~a~~T------~~dllaRmAvvp~vlEAr--GLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf~ 222 (303)
-|. .+.+. ..|...-+..+.+|+|.. +|=..+ +++--..+||..+..++.. |..||-.|.+.|.-=++
T Consensus 166 ~W~~~~~R~~fE~~~~t~Dw~E~~valnlvfEp~~tnll~v~-l~~~Aa~NGD~~tptl~~S-~qsDe~Rh~~~g~alv~ 243 (500)
T 3ge3_A 166 EWAAIAAKHFFDDIITGRDAISVAIMLTFSFETGFANMQFLG-LAADAAEAGDYTFANLISS-IQTDESRHAQQGGPALQ 243 (500)
T ss_dssp CHHHHHHHHHHHHHTTSSCHHHHHHHTCCCCCCCCHHHHHTH-HHHHHHHTTCHHHHHHHHH-HHHHHHHHGGGHHHHHH
T ss_pred hhhhhHHHHHHHHHHccCCHHHHHHHHHhhHHHhhhHHHHHH-HHHHHHHcCChhhHHHHHH-HHHhHHHHHHHHHHHHH
Confidence 555 33321 235555556666666652 222233 5667778999999999984 79999999999999999
Q ss_pred HHHHh
Q 022031 223 YLCLR 227 (303)
Q Consensus 223 ~lc~~ 227 (303)
++.++
T Consensus 244 ~lle~ 248 (500)
T 3ge3_A 244 LLIEN 248 (500)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 99874
No 38
>2fzf_A Hypothetical protein; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI; 2.70A {Pyrococcus furiosus} SCOP: a.25.1.1
Probab=93.23 E-value=1.5 Score=36.66 Aligned_cols=132 Identities=11% Similarity=0.033 Sum_probs=83.2
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCCCCCCccchh---hHH--
Q 022031 81 QAIVHSLAHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSSYGALPAHDG---LWD-- 155 (303)
Q Consensus 81 a~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~YGd~P~H~g---LW~-- 155 (303)
..+|-.....|..|++......-+.. + .+-..=+.+.|.+|.+|...+.+++.++ .|+.|.-+. .|.
T Consensus 22 ~e~L~~A~~~E~~a~~~Y~~~A~~~~---~--~~~~~~f~~lA~~E~~H~~~l~~~~~~l---~g~~~~~~~~~~~~~~~ 93 (175)
T 2fzf_A 22 EELLGMAIKAEIGAREFYKSLAEKIK---I--EALKEKINWLAEEEKKHEALLRKLYSQM---FPGKEVVFPKEHIGPEL 93 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCC---C--TTHHHHHHHHHHHTHHHHHHHHHHHHHH---STTCCCCCCSCCBSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCC---C--HHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCCCcchhhhhhhhh
Confidence 44455555689999999887777663 2 4566667789999999999999999987 222222111 111
Q ss_pred -----HHHhhhhhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHHHHHHH
Q 022031 156 -----SAIATSKDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWFRYLCL 226 (303)
Q Consensus 156 -----~a~~T~~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf~~lc~ 226 (303)
... ...++ ..+--.-+-.|....+ .+.+-.....|....++++. |..||..|...=.+++..+.+
T Consensus 94 ~~~~~~~~-~~~~~-~~~L~~ai~~E~~a~~---~Y~~~a~~~~d~~~r~l~~~-ia~eE~~H~~~l~~~l~~l~~ 163 (175)
T 2fzf_A 94 QPVARELE-KVQDI-IDLIRWAMKAEEIAAE---FYLKLEEMVKEEEKKRLMRY-LADMERGHYYTLRAEYELLLN 163 (175)
T ss_dssp CCCCSCCC-SHHHH-HHHHHHHHHHHHHHHH---HHHHHHHTSCSHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHhcc-ccCCH-HHHHHHHHHHHHHHHH---HHHHHHhhCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhh
Confidence 000 00111 1222223345655333 44444455689999999995 799999999766666666654
No 39
>2vxx_A Starvation induced DNA binding protein; stress response protein, DPS, oxidation, iron binding, ferroxidase centre; HET: PG4; 2.40A {Synechococcus elongatus}
Probab=92.67 E-value=3 Score=35.63 Aligned_cols=122 Identities=15% Similarity=0.031 Sum_probs=77.6
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCC-hhHHHhHHHHHHHHHHHHHHHHHHHHHhCCCC-C---------CCc
Q 022031 80 RQAIVHSLAHTESWAIDLSWDIVARFGKQEAMP-REFFTDFVKVAQDEGRHFTLLAARLEELGSSY-G---------ALP 148 (303)
Q Consensus 80 ra~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP-~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~Y-G---------d~P 148 (303)
-+..|=.+-.-|+.|+....-..+.+. +.- .++..=+-+.+.||..|+-.+.+|+..||..- + .++
T Consensus 29 vi~~LN~~La~e~~a~~~y~~~hw~v~---g~~f~~lh~~~~~~~~ee~~had~laErI~~LGg~p~~~~~~~~~~s~i~ 105 (192)
T 2vxx_A 29 ICEGMNRLLASFQALYLQYQKHHFVVE---GAEFYPLHQFFQDCYEQVQDHVHALGERLNGLGGVPVAGFQQLAALCCFT 105 (192)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCC---STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhc---CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHCcCC
Confidence 356677777789999999999988883 222 22333455778899999999999999999852 2 233
Q ss_pred cchhhHHHHHhhh-hhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhH
Q 022031 149 AHDGLWDSAIATS-KDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHC 214 (303)
Q Consensus 149 ~H~gLW~~a~~T~-~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV 214 (303)
.-.+=|......- .++..--.++-.+-+ +++.....||..+.++|+. |+.||-.|+
T Consensus 106 e~~~~~~~~~e~l~~~l~~e~~~i~~~~~---------~i~~a~~~~D~~T~~lL~~-~l~eeEkh~ 162 (192)
T 2vxx_A 106 PEPEGAFNCRQMLSNDLQAEQAIIGVLRQ---------QATQAESLGDRATAYLYDQ-ILLKTEERA 162 (192)
T ss_dssp CCCSSBCCHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHTCHHHHHHHHH-HHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHCCCHHHHHHHHH-HHHHHHHHH
Confidence 2111011111111 122222233332222 4555567899999999995 688998886
No 40
>1ji5_A DLP-1; dodecamer, four-helix bundle, metal transport; 2.50A {Bacillus anthracis} SCOP: a.25.1.1
Probab=91.85 E-value=1.8 Score=34.62 Aligned_cols=89 Identities=17% Similarity=0.157 Sum_probs=55.0
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHhCCCCCC----------CccchhhHHHHHhhhh-hHHHHHHHhhhhHhhcCCCCC
Q 022031 115 FFTDFVKVAQDEGRHFTLLAARLEELGSSYGA----------LPAHDGLWDSAIATSK-DLLARLAIEHCVHEARGLDVL 183 (303)
Q Consensus 115 Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~YGd----------~P~H~gLW~~a~~T~~-dllaRmAvvp~vlEArGLD~~ 183 (303)
+..=+-+.+.+|..|...+.+|+..+|..-=. ++...+=| +....-. ++..--.++-.+-+
T Consensus 35 l~~~~~~~~~ee~~had~laeri~~lGg~p~~~~~~~~~~s~i~~~~~~~-~~~e~l~~~l~~e~~~~~~~~~------- 106 (142)
T 1ji5_A 35 LHEKFEELYTESATHIDEIAERILAIGGKPVATMKEYLEISSIQEAAYGE-TAEGMVEAIMKDYEMMLVELKK------- 106 (142)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCCCCCCCTTC-CHHHHHHHHHHHHHHHHHHHHH-------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhhCCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHH-------
Confidence 34445578889999999999999999986322 32222213 2222222 22222222232222
Q ss_pred HHHHHHHHcCCChHHHHHHHhhcchhhhhhH
Q 022031 184 PTTISRFRNGGDNETAKLLETVVYPEEITHC 214 (303)
Q Consensus 184 p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV 214 (303)
+++.....||..|.++|+. |+.||-.|+
T Consensus 107 --~~~~a~~~~D~~t~~~l~~-~l~e~ek~~ 134 (142)
T 1ji5_A 107 --GMEIAQNSDDEMTSDLLLG-IYTELEKHA 134 (142)
T ss_dssp --HHHHHHHTTCHHHHHHHHH-HHHHHHHHH
T ss_pred --HHHHHHHCCCHHHHHHHHH-HHHHHHHHH
Confidence 4455567899999999995 688898887
No 41
>1syy_A Ribonucleoside-diphosphate reductase beta chain; DIIRON, oxygen activation, iron coupled radical, immune EVAS replication, oxidoreductase; 1.70A {Chlamydia trachomatis} SCOP: a.25.1.2 PDB: 4d8g_A 4d8f_A 2ani_A
Probab=91.24 E-value=0.51 Score=44.63 Aligned_cols=145 Identities=14% Similarity=0.069 Sum_probs=84.2
Q ss_pred CHhHHHHHHHHHHhhHHHHHHHH-----HHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCCC----CC
Q 022031 76 SLQSRQAIVHSLAHTESWAIDLS-----WDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSSY----GA 146 (303)
Q Consensus 76 t~~~ra~lLHaiAHIE~~AIdLa-----~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~Y----Gd 146 (303)
+..-|-.+.|.++=. .+.|-. +..++.+- ..| +-..=....+.+|+.|-..+..-|..+|.+= ..
T Consensus 71 t~~Er~~~~~~l~~~--~~~D~iv~~~~~~~l~~~v---~~~-E~~~~l~~q~~~EaiHs~sYs~il~tl~~~~~e~f~~ 144 (346)
T 1syy_A 71 SEDERRVILLNLGFF--STAESLVGNNIVLAIFKHV---TNP-EARQYLLRQAFEEAVHTHTFLYICESLGLDEKEIFNA 144 (346)
T ss_dssp CHHHHHHHHHHHHHH--HHHHHHHHHHHHHTHHHHC---CCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTH
T ss_pred CHHHHHHHHHHHHHH--HHHHHHHHHhHHHHHHHhC---CcH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence 445677777777542 222222 12233331 222 2222234678999999999999999998642 21
Q ss_pred CccchhhHHHH---H----------------hhhhhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCCh-HHHHHHHhhc
Q 022031 147 LPAHDGLWDSA---I----------------ATSKDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDN-ETAKLLETVV 206 (303)
Q Consensus 147 ~P~H~gLW~~a---~----------------~T~~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~-~sa~iL~~iI 206 (303)
+--...|-+.+ . .+..+++.++.....++|+-=+=.+=.++--|.+.|-. .++.+++ -|
T Consensus 145 ~~~~p~l~~k~~~i~~~y~~~~~~~~~~~~~~~~~~~~~~lva~~~~lEGi~FysgF~~~~~l~~~g~m~g~~~~i~-~I 223 (346)
T 1syy_A 145 YNERAAIKAKDDFQMEITGKVLDPNFRTDSVEGLQEFVKNLVGYYIIMEGIFFYSGFVMILSFHRQNKMIGIGEQYQ-YI 223 (346)
T ss_dssp HHHCHHHHHHHHHHHHTTSGGGSTTCCSSSHHHHHHHHHHHHHHHTTTTTTHHHHHHHHHHHHHHTTSSHHHHHHHH-HH
T ss_pred HhhCHHHHHHHHHHHHHHHHhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhHHHHHH-HH
Confidence 11111111111 0 01235555665555677764333333344556666754 5577888 68
Q ss_pred chhhhhhHHhhhHHHHHHHHh
Q 022031 207 YPEEITHCAAGVRWFRYLCLR 227 (303)
Q Consensus 207 ~~DEI~HV~~G~rWf~~lc~~ 227 (303)
.+||.-|+.+|...|+.+.++
T Consensus 224 ~RDE~~H~~f~~~l~~~~~~e 244 (346)
T 1syy_A 224 LRDETIHLNFGIDLINGIKEE 244 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999988763
No 42
>1z6o_M Ferritin heavy chain; metal binding protein, iron storage; 1.91A {Trichoplusia NI} SCOP: a.25.1.1
Probab=90.58 E-value=7.7 Score=33.39 Aligned_cols=135 Identities=17% Similarity=0.109 Sum_probs=85.5
Q ss_pred hHHHHHHHHHHhhHHHHHHHHHHHHHhcCCC-CCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCCC------CCCccc
Q 022031 78 QSRQAIVHSLAHTESWAIDLSWDIVARFGKQ-EAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSSY------GALPAH 150 (303)
Q Consensus 78 ~~ra~lLHaiAHIE~~AIdLa~Dav~RF~~~-~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~Y------Gd~P~H 150 (303)
..-...|....+.|+.|+...+-...=|... .++| .|-.=+.+.+.||-.|...+.+++..+|..- .++|.-
T Consensus 19 ~~~~~~LN~qin~El~As~~Yl~ma~~f~~~~~~l~-g~a~~f~~~s~EE~~HA~kli~yi~~rGg~~~~~~~l~~i~~p 97 (191)
T 1z6o_M 19 RSCRNSMRQQIQMEVGASLQYLAMGAHFSKDVVNRP-GFAQLFFDAASEEREHAMKLIEYLLMRGELTNDVSSLLQVRPP 97 (191)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCCGGGCCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCcccCChH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchhhhhhcCCCC
Confidence 3568899999999999999999887777531 2454 5655566789999999999999999999865 444443
Q ss_pred h-hhH-------HHHHhhhhhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcC---CChHHHHHHHhhcchhhhhhHHh-hh
Q 022031 151 D-GLW-------DSAIATSKDLLARLAIEHCVHEARGLDVLPTTISRFRNG---GDNETAKLLETVVYPEEITHCAA-GV 218 (303)
Q Consensus 151 ~-gLW-------~~a~~T~~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~---GD~~sa~iL~~iI~~DEI~HV~~-G~ 218 (303)
. +=| +.+.+....+..++-= +++..... +|....+.|+.-.+.+++...+. |
T Consensus 98 ~~~~~~~~~e~le~aL~~Ek~v~~~i~~---------------l~~~a~~~~D~~d~~~~d~Le~~fl~EQve~~~~l~- 161 (191)
T 1z6o_M 98 TRSSWKGGVEALEHALSMESDVTKSIRN---------------VIKACEDDSEFNDYHLVDYLTGDFLEEQYKGQRDLA- 161 (191)
T ss_dssp SCCCCSSHHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHCTTCCCHHHHHHHHHTHHHHHHHHHHHHH-
T ss_pred CccccCCHHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHcCCcCCHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 2 333 2232222233333222 22333334 66666666663247777777766 5
Q ss_pred HHHHHHHHhcC
Q 022031 219 RWFRYLCLRSR 229 (303)
Q Consensus 219 rWf~~lc~~~~ 229 (303)
....-+++-.|
T Consensus 162 ~~i~~l~k~~~ 172 (191)
T 1z6o_M 162 GKASTLKKLMD 172 (191)
T ss_dssp HHHHHHHTTTT
T ss_pred HHHHHHHHHcC
Confidence 33444444333
No 43
>1o9i_A Pseudocatalase; oxidoreductase, hexamer, dimanganese catalase, metalloenzyme, preoxidase; HET: MES; 1.33A {Lactobacillus plantarum} SCOP: a.25.1.3 PDB: 1jkv_A 1jku_A
Probab=90.23 E-value=1.4 Score=40.76 Aligned_cols=128 Identities=13% Similarity=0.141 Sum_probs=76.2
Q ss_pred HhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCC--CC--------------------
Q 022031 88 AHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSS--YG-------------------- 145 (303)
Q Consensus 88 AHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~--YG-------------------- 145 (303)
+.=|+.|+-..|--.+.+. + |.-|++=+..++.||-.|..|+......|+-. ..
T Consensus 32 ~~GElsAamqYl~Q~~~~~---~-~~~y~dLL~dIatEEl~HlEmva~~I~~L~~ga~~~~~~a~~~p~~~~~~~g~n~~ 107 (266)
T 1o9i_A 32 QWGETTGMMSFLSQGWAST---G-AEKYKDLLLDTGTEEMAHVEMISTMIGYLLEDAPFGPEDLKRDPSLATTMAGMDPE 107 (266)
T ss_dssp TTSHHHHHHHHHHHHHHCC---S-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCSHHHHHHCTTHHHHHHHSCHH
T ss_pred CccHHHHHHHHHHHHhcCC---C-cHHHHHHHHHHHHHhccHHHHHHHHHHHHcCCCCcchhhcccchhhHhhhcCCChH
Confidence 3479999988887777773 3 53345545567799999999999999999542 11
Q ss_pred --------CCccch--hhHHHHHh-hhhhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhH
Q 022031 146 --------ALPAHD--GLWDSAIA-TSKDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHC 214 (303)
Q Consensus 146 --------d~P~H~--gLW~~a~~-T~~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV 214 (303)
.+|+.. .-|.++.- ...|+.+=|- --+..|+++.- .+.+-++-..|....++|. .|+.+|+.|.
T Consensus 108 ~~~~~g~g~~p~ds~G~pWt~~yv~~~Gdl~aDL~-~niaaE~~Ar~---~Y~rl~~~tdDp~vkd~L~-fLi~RE~~H~ 182 (266)
T 1o9i_A 108 HSLVHGLNASLNNPNGAAWNAGYVTSSGNLVADMR-FNVVRESEARL---QVSRLYSMTEDEGVRDMLK-FLLARETQHQ 182 (266)
T ss_dssp HHHTTSSCCCSBCTTCCBCBGGGCCCCSCHHHHHH-HHHHHHHHHHH---HHHHHHTTCCCHHHHHHHH-HHHHHHHHHH
T ss_pred HHHhcCCCCCccCCCCCCCcccccccCCCHHHHHH-HHHHHHHHHHH---HHHHHHHhcCChhHHHHHH-HHHHHHHHHH
Confidence 111111 12222221 1112222211 23345555422 2333344566888888998 5789999999
Q ss_pred HhhhHHHHHH
Q 022031 215 AAGVRWFRYL 224 (303)
Q Consensus 215 ~~G~rWf~~l 224 (303)
..=-+-++-+
T Consensus 183 ~~f~~aLe~l 192 (266)
T 1o9i_A 183 LQFMKAQEEL 192 (266)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8644555555
No 44
>3ge3_B Toluene-4-monooxygenase system protein E; DIIRON hydroxylase, effector protein, T201A, aromatic hydrocarbons catabolism, FAD, flavoprotein; 1.52A {Pseudomonas mendocina} PDB: 3ge8_B 3i5j_B 3i63_B 3dhi_B* 3dhh_B* 3dhg_B* 3q14_B 3q2a_B* 3q3m_B* 3q3n_B* 3q3o_B* 3rmk_B* 3ri7_B
Probab=90.09 E-value=4.1 Score=38.49 Aligned_cols=141 Identities=11% Similarity=-0.061 Sum_probs=94.4
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHH---HHHHHHHhCCCCCCCccch-----
Q 022031 80 RQAIVHSLAHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTL---LAARLEELGSSYGALPAHD----- 151 (303)
Q Consensus 80 ra~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~L---l~~rL~eLG~~YGd~P~H~----- 151 (303)
-...+=.+.|.|+.|.- +--.+.|+. .-.....--+=.+.||.||..+ +...|..-+-.+|..-.|.
T Consensus 118 l~~~l~pl~~~e~~a~m-~~a~~~r~~----~~~~i~na~~fqa~DelRhaQ~~q~~~~~l~~~~~~~~~~~~~k~~W~~ 192 (327)
T 3ge3_B 118 MARCYSPLRYLFHCLQM-SSAYVQQMA----PASTISNCCILQTADSLRWLTHTAYRTHELSLTYPDAGLGEHERELWEK 192 (327)
T ss_dssp HHHHTTTHHHHHHHHHH-HHHHHHHHC----SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCTTTSHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHH-HHHHHHHhc----CCHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCCchhHHHHHHhh
Confidence 34455568888888854 333477884 3455555556678999999665 4444444444444333343
Q ss_pred -hhHHHHHhhh------hhHHHHHHHhhhhHhh--cCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHHH
Q 022031 152 -GLWDSAIATS------KDLLARLAIEHCVHEA--RGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWFR 222 (303)
Q Consensus 152 -gLW~~a~~T~------~dllaRmAvvp~vlEA--rGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf~ 222 (303)
-.|+.+.+.. .|...-+..+.+|+|. -+|=..+ +.+-...+||..+..++. -+..||-.|.+.|.-=|+
T Consensus 193 dp~Wq~~R~~~Ed~~~~~Dw~E~~vA~nlv~E~l~~~L~~~~-~~~~Aa~nGD~~t~~l~~-s~qsD~~Rh~~~~~alvk 270 (327)
T 3ge3_B 193 EPGWQGLRELMEKQLTAFDWGEAFVSLNLVVKPMIVESIFKP-LQQQAWENNDTLLPLLID-SQLKDAERHSRWSKALVK 270 (327)
T ss_dssp CHHHHHHHHHHHHHTTCCSHHHHHHHHHHTHHHHHHHHTHHH-HHHHHHHTTCCHHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHH-HHHHHHHCCChhhHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 3444443332 4556667777888885 2333334 467888999999999999 579999999999999999
Q ss_pred HHHHh
Q 022031 223 YLCLR 227 (303)
Q Consensus 223 ~lc~~ 227 (303)
+++++
T Consensus 271 ~ll~~ 275 (327)
T 3ge3_B 271 HALEN 275 (327)
T ss_dssp HHTTS
T ss_pred HHhcC
Confidence 99775
No 45
>1mhy_B Methane monooxygenase hydroxylase; oxidoreductase, NADP, one-carbon metabolism; 2.00A {Methylosinus trichosporium} SCOP: a.25.1.2 PDB: 1mhz_B
Probab=89.97 E-value=0.9 Score=44.20 Aligned_cols=140 Identities=16% Similarity=0.012 Sum_probs=99.2
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCCCCCCc----------cc
Q 022031 81 QAIVHSLAHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSSYGALP----------AH 150 (303)
Q Consensus 81 a~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~YGd~P----------~H 150 (303)
...+=.+.|.|+.|.--. =.+.|+. .-.....--+=.+.||.||-.++..++.+||-.|.++. .|
T Consensus 149 ~~~l~p~r~~Eyga~~~~-a~~~r~~----~~~~i~na~~fqa~DeLRhaQ~~~~~~~~l~~~~~g~~~~~~~~k~~W~~ 223 (395)
T 1mhy_B 149 NKYFGALLYSEYGLFNAH-SSVGRDC----LSDTIRQTAVFAALDKVDNAQMIQMERLFIAKLVPGFDASTDVPKKIWTT 223 (395)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHHHHC----SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCCSHHHHHHHHH
T ss_pred HHHHhhhhHHHHHHHHHH-HHHHhhc----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHhh
Confidence 445667888888776433 4457773 45555666666788999999999999999999998885 45
Q ss_pred hhhHHHHHhhhh-------hHHHHHHHhhhhHhhc--CCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHH
Q 022031 151 DGLWDSAIATSK-------DLLARLAIEHCVHEAR--GLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWF 221 (303)
Q Consensus 151 ~gLW~~a~~T~~-------dllaRmAvvp~vlEAr--GLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf 221 (303)
+-.|+-+.+..+ |...-+..+.+|+|.- +|=..+...+--...||.-+..++.. +..||-.|.+.|.-=|
T Consensus 224 dp~Wq~~R~~~E~~~l~~~Dw~E~~vA~nlv~E~l~~~L~~~~~~~~~Aa~nGD~~tptl~~s-~q~D~~Rh~~~~~alv 302 (395)
T 1mhy_B 224 DPIYSGARATVQEIWQGVQDWNEILWAGHAVYDATFGQFARREFFQRLATVYGDTLTPFFTAQ-SQTYFQTTRGAIDDLF 302 (395)
T ss_dssp CGGGHHHHHHHHHHHHSCCCHHHHHHHHHHTHHHHHHHHHHTTTHHHHHTTTTCSSHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCchhHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 667766554433 4445566677777752 12222222455567899999888885 7899999999998888
Q ss_pred HHHHH
Q 022031 222 RYLCL 226 (303)
Q Consensus 222 ~~lc~ 226 (303)
+++.+
T Consensus 303 k~lle 307 (395)
T 1mhy_B 303 VYCLA 307 (395)
T ss_dssp CCCCC
T ss_pred HHHHh
Confidence 88753
No 46
>1jig_A DLP-2; dodecamer, four-helix bundle, metal transport; 1.46A {Bacillus anthracis} SCOP: a.25.1.1
Probab=88.10 E-value=4.5 Score=32.45 Aligned_cols=89 Identities=17% Similarity=0.151 Sum_probs=55.4
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHhCCC-CCC---------CccchhhHHHHHhhhh-hHHHHHHHhhhhHhhcCCCCC
Q 022031 115 FFTDFVKVAQDEGRHFTLLAARLEELGSS-YGA---------LPAHDGLWDSAIATSK-DLLARLAIEHCVHEARGLDVL 183 (303)
Q Consensus 115 Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~-YGd---------~P~H~gLW~~a~~T~~-dllaRmAvvp~vlEArGLD~~ 183 (303)
+..=+-+.+.+|..|.-.+.+|+..||.. .+. ++....=| .+...-. ++..--.++..+-+
T Consensus 39 lh~~~~~~~~ee~~had~laeri~~lGg~p~~~~~~~~~~s~i~~~~~~~-~~~e~l~~~l~~e~~~~~~~~~------- 110 (146)
T 1jig_A 39 LHEKFEEFYNEAGTYIDELAERILALEGKPLATMKEYLATSSVNEGTSKE-SAEEMVQTLVNDYSALIQELKE------- 110 (146)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCCSCCCCSCC-CHHHHHHHHHHHHHHHHHHHHH-------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhHCcCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHH-------
Confidence 33444567888889999999999999986 333 22212113 2222222 23333333333333
Q ss_pred HHHHHHHHcCCChHHHHHHHhhcchhhhhhH
Q 022031 184 PTTISRFRNGGDNETAKLLETVVYPEEITHC 214 (303)
Q Consensus 184 p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV 214 (303)
.++.....||..|.++|+. |+.||-.|+
T Consensus 111 --~i~~a~~~~D~~T~~ll~~-~l~e~ek~~ 138 (146)
T 1jig_A 111 --GMEVAGEAGDATSADMLLA-IHTTLEQHV 138 (146)
T ss_dssp --HHHHHHHTTCHHHHHHHHH-HHHHHHHHH
T ss_pred --HHHHHHHCCCHHHHHHHHH-HHHHHHHHH
Confidence 4555677899999999996 688888886
No 47
>2c41_A DPS family DNA-binding stress response protein; iron-binding/oxidation protein, DPS (DNA-binding proteins from starved cells); HET: PG4 PGE; 1.81A {Thermosynechococcus elongatus}
Probab=87.75 E-value=10 Score=31.00 Aligned_cols=121 Identities=12% Similarity=-0.032 Sum_probs=77.6
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCCh-hHHHhHHHHHHHHHHHHHHHHHHHHHhCCC-CCC---------Cc
Q 022031 80 RQAIVHSLAHTESWAIDLSWDIVARFGKQEAMPR-EFFTDFVKVAQDEGRHFTLLAARLEELGSS-YGA---------LP 148 (303)
Q Consensus 80 ra~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~-~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~-YGd---------~P 148 (303)
-+.+|-..-.-|+.++....-.-+=+. +.-. .+..=+-+.+.+|..|+-.+.+|+..||.. .+. ++
T Consensus 11 v~~~LN~~La~e~~~~~~y~~~hw~v~---g~~f~~lh~~~~~~~~ee~~had~iaErI~~lGg~p~~~~~~~~~~s~i~ 87 (158)
T 2c41_A 11 VLTTLKREQANAVVMYLNYKKYHWLTY---GPLFRDLHLLFEEQGSEVFAMIDELAERSLMLDGQPVADPADYLKVATVT 87 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCC---STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSGGGHHHHCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhheE---CcChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHCCCC
Confidence 356666677789999999888877663 3332 333334467888899999999999999986 232 23
Q ss_pred cchhhHHHHHhhhhhHHH-HHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhH
Q 022031 149 AHDGLWDSAIATSKDLLA-RLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHC 214 (303)
Q Consensus 149 ~H~gLW~~a~~T~~dlla-RmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV 214 (303)
.... |..+...-..++. --.++-.+-+ .++.....||..|.++|+. |+.+|-.|+
T Consensus 88 ~~~~-~~~~~e~l~~~l~~e~~~~~~~~~---------~i~~a~~~~D~~T~~ll~~-~l~~~Ek~~ 143 (158)
T 2c41_A 88 PSSG-QLTVKQMIEEAIANHELIITEMHQ---------DAEIATEAGDIGTADLYTR-LVQTHQKHR 143 (158)
T ss_dssp CCCS-CCCHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHTTCHHHHHHHHH-HHHHHHHHH
T ss_pred CCCC-CCCHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHCCCHHHHHHHHH-HHHHHHHHH
Confidence 3333 3333332222222 2223332222 4556678899999999996 688888886
No 48
>3ee4_A Probable ribonucleoside-diphosphate reductase; manganese, iron, DIIRON, carboxylate, oxidase, ligand, C monooxygenase; HET: MYR; 1.90A {Mycobacterium tuberculosis} PDB: 4ac8_A*
Probab=87.71 E-value=3.7 Score=38.55 Aligned_cols=106 Identities=12% Similarity=-0.010 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCccc------hhhHH----HHHh------hhhhHHHHHHHhhhhHhhcCCCCCH
Q 022031 121 KVAQDEGRHFTLLAARLEELGSSYGALPAH------DGLWD----SAIA------TSKDLLARLAIEHCVHEARGLDVLP 184 (303)
Q Consensus 121 ~VA~DEarHF~Ll~~rL~eLG~~YGd~P~H------~gLW~----~a~~------T~~dllaRmAvvp~vlEArGLD~~p 184 (303)
..+.+|+.|-..+...+..+|.+-.-+... ...|. .+.+ +..+++.++.....++|+-=+=.+=
T Consensus 105 ~q~~~EaiHs~sYs~il~tl~~~~~~f~~~~~~p~lr~k~~~~l~~~~~~~~~~~~~~~~~~~lvaf~~~lEGi~FysgF 184 (323)
T 3ee4_A 105 QFAFEEAKHTQVFRMWLDAVGISEDLHRYLDDLPAYRQIFYAELPECLNALSADPSPAAQVRASVTYNHIVEGMLALTGY 184 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCSCCGGGGTTCHHHHHHHHTHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHcCHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 568999999999999999999874422222 11221 1111 1112444555545566653222221
Q ss_pred H-HHHHHHcCCCh-HHHHHHHhhcchhhhhhHHhhhHHHHHHHHh
Q 022031 185 T-TISRFRNGGDN-ETAKLLETVVYPEEITHCAAGVRWFRYLCLR 227 (303)
Q Consensus 185 ~-~i~kl~~~GD~-~sa~iL~~iI~~DEI~HV~~G~rWf~~lc~~ 227 (303)
. +.--|.+.|-. .++++++ -|.+||.-|+.+|..=|+.+.++
T Consensus 185 ~~~~~~l~~rg~m~G~~~~i~-lI~RDE~~H~~f~~~l~~~l~~e 228 (323)
T 3ee4_A 185 YAWHKICVERAILPGMQELVR-RIGDDERRHMAWGTFTCRRHVAA 228 (323)
T ss_dssp HHHHHHHTTTTCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCchHHHHHH-HHHHHHHHHHHHHHHHHHHHHHh
Confidence 1 22236666644 5578888 68999999999999999998765
No 49
>2inc_B Toluene, O-xylene monooxygenase oxygenase subunit; DIIRON, 4-helix bundle, carboxylate bridge, metalloenzyme, oxidoreductase; HET: P6G; 1.85A {Pseudomonas stutzeri} SCOP: a.25.1.2 PDB: 3n20_B* 1t0r_B 1t0s_B 1t0q_B* 3n1x_B 3n1y_B* 3n1z_B* 2rdb_B* 3rn9_B* 3rna_B 3rnb_B 3rnc_B 3rne_B 3rnf_B* 3rng_B 2ind_B*
Probab=87.56 E-value=11 Score=35.45 Aligned_cols=134 Identities=10% Similarity=-0.039 Sum_probs=89.8
Q ss_pred HHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHH---HHHHHHHHhCCCCCCCccchhhH------HHH
Q 022031 87 LAHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFT---LLAARLEELGSSYGALPAHDGLW------DSA 157 (303)
Q Consensus 87 iAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~---Ll~~rL~eLG~~YGd~P~H~gLW------~~a 157 (303)
+-|.|+.| .++-=.+.|+. .-.....--+=.+.||.||-. ++..-|..-+-.||+.-.+...| +-+
T Consensus 121 ~~~~e~~~-~~~~a~~~r~~----~~~~i~n~~~~qa~DelR~aQ~~~y~~~~L~~~~~~~g~~~~~k~~w~~~p~wq~~ 195 (322)
T 2inc_B 121 ARYLFHAL-QMGSVYIHQIA----PASTITNCATYETADHLRWLTHTAYRTRELANCYPDVGFGKRERDVWENDPAWQGF 195 (322)
T ss_dssp HHHHHHHH-HHHHHHHHHHC----SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCTTTSHHHHHHHCHHHHHH
T ss_pred HHHHHHHH-HHHHHHHHHhc----CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccchHHHHHHhcCchhHHH
Confidence 44555543 23334456663 344555555667789999999 55577777676676665444444 333
Q ss_pred Hhh------hhhHHHHHHHhhhhHhhc--CCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHHHHHHHh
Q 022031 158 IAT------SKDLLARLAIEHCVHEAR--GLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWFRYLCLR 227 (303)
Q Consensus 158 ~~T------~~dllaRmAvvp~vlEAr--GLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf~~lc~~ 227 (303)
.+. ..|...-+..+.+|+|.. +|=..+ +.+-...+||..+..++. -|..||-.|.+.|.-=|+++.++
T Consensus 196 R~~~E~~~~~~Dw~E~~va~nlv~e~l~~~l~~~~-~~~~Aa~nGD~~t~~l~~-s~q~D~~Rh~~~~~alvk~~~~~ 271 (322)
T 2inc_B 196 RELIEKALIAWDWGEAFTAINLVTKPAVEEALLQQ-LGSLAQSEGDTLLGLLAQ-AQKRDAERHRRWSSALVKMALEK 271 (322)
T ss_dssp HHHHHHHTTCCSHHHHHHHHHTTHHHHHHHHHTHH-HHHHHHHTTCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHhhccCCHHHHHHHHHHHHHHhhhHHHHHH-HHHHHHHCCChhHHHHHH-HHHHHHHHHHHHHHHHHHHHHcC
Confidence 222 245666666777787763 333333 467777899999999999 57999999999999999999764
No 50
>4di0_A Rubrerythrin; ssgcid, seattle structural genomics center for infectious DI peroxidase, oxidoreductase; 1.90A {Burkholderia pseudomallei}
Probab=86.88 E-value=1.8 Score=36.13 Aligned_cols=117 Identities=23% Similarity=0.188 Sum_probs=75.0
Q ss_pred HHHHHHHHhhHHHHHHHHHHH--HHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCCCCCCccchhhHHHHH
Q 022031 81 QAIVHSLAHTESWAIDLSWDI--VARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSSYGALPAHDGLWDSAI 158 (303)
Q Consensus 81 a~lLHaiAHIE~~AIdLa~Da--v~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~YGd~P~H~gLW~~a~ 158 (303)
..|.-++ .-|.+|+.-.+-- +++= .+.|. .-.=|-++|.+|..|-..+-++|..+|.--+.+|+ .
T Consensus 15 ~nL~~af-agEs~A~~~Y~~~A~~A~~---eG~~~-iA~~F~~~A~~E~~HA~~~~~~L~~~~~p~~~~~~--------~ 81 (144)
T 4di0_A 15 ENLKYAF-AGESQANRRYLYFASKADV---EGQND-IAALFRSTAEGETGHAHGHLEYLEAVGDPATGLPF--------G 81 (144)
T ss_dssp HHHHHHH-HHHHHHHHHHHHHHHHHHH---HTCHH-HHHHHHHHHHHHHHHHHHHHHHHTTTCCTTTSCCC--------S
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHH---CChHH-HHHHHHHHHHHHHHHHHHHHHHHhhcCCcccCCCC--------C
Confidence 3444444 4689998876421 2221 13332 33445689999999999999999887633233443 2
Q ss_pred hhhhhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHH
Q 022031 159 ATSKDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCA 215 (303)
Q Consensus 159 ~T~~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~ 215 (303)
+|...|...++--..... +.=|.+++.-+.-|+...+++++. |..+|-.|..
T Consensus 82 ~T~enL~~A~~GE~~e~~----~~Y~~~a~~A~~eG~~~ia~~f~~-~a~~E~~Ha~ 133 (144)
T 4di0_A 82 TSRQNLQSAIAGETHEYT----DMYPGMAKTARDEGFEEIANWFET-LAKAERSHAN 133 (144)
T ss_dssp SHHHHHHHHHHHHHHHHH----THHHHHHHHHHHHTCHHHHHHHHH-HHHHHHHHHH
T ss_pred cHHHHHHHHHHhHHHHHH----HHHHHHHHHHHHCCcHHHHHHHHH-HHHHHHHHHH
Confidence 455555554443322111 233678888899999999999994 7999999974
No 51
>1n1q_A DPS protein; four-helix bundle, unknown function; 2.20A {Brevibacillus brevis} SCOP: a.25.1.1
Probab=86.79 E-value=5.8 Score=31.99 Aligned_cols=90 Identities=17% Similarity=0.168 Sum_probs=55.7
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHhCCC-CCC---------CccchhhHHHHHhhhh-hHHHHHHHhhhhHhhcCCCCC
Q 022031 115 FFTDFVKVAQDEGRHFTLLAARLEELGSS-YGA---------LPAHDGLWDSAIATSK-DLLARLAIEHCVHEARGLDVL 183 (303)
Q Consensus 115 Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~-YGd---------~P~H~gLW~~a~~T~~-dllaRmAvvp~vlEArGLD~~ 183 (303)
+..=+-+.+.+|..|+-.+.+|+..||.. .+. ++....=| .+...-. ++..--.++-.+-+
T Consensus 42 lh~~~~~~~~ee~~had~laeri~~lGg~p~~~~~~~~~~s~i~~~~~~~-~~~e~l~~~l~~e~~~~~~~~~------- 113 (149)
T 1n1q_A 42 LHEKFEELYTEASGHIDTLAERVLSIGGSPIATLAASLEEASIKEATGGE-SAAEMVSSVVNDFVDLVGELKV------- 113 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCSCCCCSCC-CHHHHHHHHHHHHHHHHHHHHH-------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhHCCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHH-------
Confidence 34444567888889999999999999986 333 22222113 2222222 22222333333333
Q ss_pred HHHHHHHHcCCChHHHHHHHhhcchhhhhhHH
Q 022031 184 PTTISRFRNGGDNETAKLLETVVYPEEITHCA 215 (303)
Q Consensus 184 p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~ 215 (303)
.++.....||..|.++|+. |+.||-.|+-
T Consensus 114 --~i~~a~~~~D~~T~~ll~~-~l~e~ek~~w 142 (149)
T 1n1q_A 114 --ARDVADEADDEATADMLDA-IEAGLEKHVW 142 (149)
T ss_dssp --HHHHHHHTTCHHHHHHHHH-HHHHHHHHHH
T ss_pred --HHHHHHHCCCHHHHHHHHH-HHHHHHHHHH
Confidence 4555677899999999996 6888888863
No 52
>3hl1_A Ferritin like protein; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Caulobacter vibrioides}
Probab=86.43 E-value=3.6 Score=38.97 Aligned_cols=66 Identities=14% Similarity=0.085 Sum_probs=57.6
Q ss_pred CCHhHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCC
Q 022031 75 GSLQSRQAIVHSLAHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSS 143 (303)
Q Consensus 75 ~t~~~ra~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~ 143 (303)
.+.+.-..+|+.-+-+|++.|=..+=+.|--. +-..+-+.=...|+.||-.|+.|..+.|..+|..
T Consensus 6 ~~~~~L~~~Lq~Ai~lE~stIp~YL~a~ySi~---~~n~~~~~~i~~V~~eEMlHl~l~aNll~AiGg~ 71 (317)
T 3hl1_A 6 WTLPRLYQHFQGAIDLELWTIPYYLTVLYSIK---DPTTVPYRLIQAAVYQEMLHAQLVSNIANAYGYS 71 (317)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHBS---CTTSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 45567788899999999999999999999774 3456788888999999999999999999999987
No 53
>2v8t_A Manganese-containing pseudocatalase; manganese catalase, oxidoreductase; 0.98A {Thermus thermophilus} PDB: 2v8u_A 2cwl_A
Probab=86.30 E-value=15 Score=34.55 Aligned_cols=120 Identities=16% Similarity=0.178 Sum_probs=76.8
Q ss_pred HhhHHHHHHHHHHHHHhcCCCCCCCh---hHHHhHHHHHHHHHHHHHHHHHHHHHh--CCCCCCC---------------
Q 022031 88 AHTESWAIDLSWDIVARFGKQEAMPR---EFFTDFVKVAQDEGRHFTLLAARLEEL--GSSYGAL--------------- 147 (303)
Q Consensus 88 AHIE~~AIdLa~Dav~RF~~~~~lP~---~Fy~Dwl~VA~DEarHF~Ll~~rL~eL--G~~YGd~--------------- 147 (303)
+.=|+.|+-..|--.+.+. -|. +|++=+..++.||-.|..|+......| |..-..+
T Consensus 33 ~~GElsAamqYl~Qs~~~~----~~~~~~~~~dLL~dIatEEL~HlEmvat~I~~L~~Ga~~~~~~~~~~~~~~p~~~a~ 108 (302)
T 2v8t_A 33 RFGEMSTLMNYMYQSFNFR----GKKALKPYYDLIANIATEELGHIELVAATINSLLAKNPGKDLEEGVDPASTPLGFAK 108 (302)
T ss_dssp TTSHHHHHHHHHHHHHHCS----CTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSTTCCCCCCCCGGGCTTGGGG
T ss_pred CccHHHHHHHHHHHHccCC----CCcchHHHHHHHHHHHHHhccHHHHHHHHHHHHcCCCChhhhhcccccccchHHHhh
Confidence 3479999988887766663 243 677777788899999999999999999 6543332
Q ss_pred ----------------ccch--hhHHHHHh-hhhhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcch
Q 022031 148 ----------------PAHD--GLWDSAIA-TSKDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYP 208 (303)
Q Consensus 148 ----------------P~H~--gLW~~a~~-T~~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~ 208 (303)
|+.. .-|.++.- +..||.+=|- --+..|+++.- .+.+-++-..|....++|. .|+.
T Consensus 109 ~~~~~~~~i~~g~g~~p~ds~G~pWta~Yv~~~Gdl~aDL~-~NiaAE~~Ar~---~Y~rL~~~tdDp~vkd~L~-fLi~ 183 (302)
T 2v8t_A 109 DVRNAAHFIAGGANSLVMGAMGEHWNGEYVFTSGNLILDLL-HNFFLEVAART---HKLRVYEMTDNPVAREMIG-YLLV 183 (302)
T ss_dssp GSSCSHHHHTSSSCCCSBCTTSCBCBGGGCCCCSCHHHHHH-HHHHHHHHHHH---HHHHHHTTCCCHHHHHHHH-HHHH
T ss_pred hcCCcHHHhhcCCCCCccCCCCCCCCcchhcCCCCHHHHHH-HHHHHHHHHHH---HHHHHHHhcCChhHHHHHH-HHHH
Confidence 1111 13433331 1123332222 33455666532 2333444566888889998 5789
Q ss_pred hhhhhHHh
Q 022031 209 EEITHCAA 216 (303)
Q Consensus 209 DEI~HV~~ 216 (303)
+|+.|...
T Consensus 184 RE~~H~~~ 191 (302)
T 2v8t_A 184 RGGVHAAA 191 (302)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999974
No 54
>1mty_B Methane monooxygenase hydroxylase; dinuclear iron center monooxygenase; 1.70A {Methylococcus capsulatus str} SCOP: a.25.1.2 PDB: 1xvb_C 1fyz_C 1fz0_C 1fz2_C 1fz3_C 1fz4_C 1fz5_C 1fz6_C 1fz7_C 1fz8_C 1fz9_C 1fzh_C 1fzi_C 1xu3_C 1xu5_C 1fz1_C 1xvc_C 1xvd_C 1xve_C 1xvf_C ...
Probab=85.79 E-value=1.6 Score=42.25 Aligned_cols=138 Identities=12% Similarity=-0.086 Sum_probs=92.8
Q ss_pred HHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCCCCCCc----cchhhHH---
Q 022031 83 IVHSLAHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSSYGALP----AHDGLWD--- 155 (303)
Q Consensus 83 lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~YGd~P----~H~gLW~--- 155 (303)
.+=.+.|.|+.|.--. =.+.|+. .-.....--+=.+.||.||-.++.-++.++|-.+.+|. .|...|.
T Consensus 143 ~l~~~r~~Eyga~~~~-a~~~r~~----~~~~i~na~~fqa~DeLRhaQ~~~~~~~~l~~~~~gf~~~~~~~k~~W~~dp 217 (384)
T 1mty_B 143 YWGAFLFNEYGLFNAH-SQGAREA----LSDVTRVSLAFWGFDKIDIAQMIQLERGFLAKIVPGFDESTAVPKAEWTNGE 217 (384)
T ss_dssp HHHHHHHHHHHHHHTT-HHHHHHC----SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCCSHHHHHHHHHCS
T ss_pred HHhhhhHHHHHHHHHH-HHHHHhc----CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhHHHHHHHhhCc
Confidence 4566777777665333 3346663 34555555566778999999999999999998877774 4455554
Q ss_pred ---HHHhhh-------hhHHHHHHHhhhhHhhc--CCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHHHH
Q 022031 156 ---SAIATS-------KDLLARLAIEHCVHEAR--GLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWFRY 223 (303)
Q Consensus 156 ---~a~~T~-------~dllaRmAvvp~vlEAr--GLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf~~ 223 (303)
-+.+.. .|...=+..+.+|+|.- +|=+.+.+++--...||.-+..++.. +..||-.|.+.|.-=|++
T Consensus 218 ~wq~~R~~vE~~~l~~~Dw~E~~va~nlv~epl~~~L~~~~~~~~~Aa~nGD~~tp~l~~s-~q~D~~Rh~~w~~alvk~ 296 (384)
T 1mty_B 218 VYKSARLAVEGLWQEVFDWNESAFSVHAVYDALFGQFVRREFFQRLAPRFGDNLTPFFINQ-AQTYFQIAKQGVQDLYYN 296 (384)
T ss_dssp TTHHHHHHHHHHHHTCCCHHHHHHHHHHTHHHHHHHHHHHTTHHHHGGGGTCCHHHHHHHH-HHHHHHHHHHHHHHHHCC
T ss_pred hhHHHHHHHHHHHhhccCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCchhHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 332222 24444555667777761 12222234555667899999988885 799999999999988888
Q ss_pred HHH
Q 022031 224 LCL 226 (303)
Q Consensus 224 lc~ 226 (303)
+++
T Consensus 297 lle 299 (384)
T 1mty_B 297 CLG 299 (384)
T ss_dssp CCC
T ss_pred HHh
Confidence 864
No 55
>1za0_A Possible acyl-[acyl-carrier protein] desaturase D (acyl-[ACP] desaturase) (stearoyl-ACP...; four-helix bundle, metal binding protein; 2.00A {Mycobacterium tuberculosis} SCOP: a.25.1.2
Probab=85.27 E-value=3.9 Score=37.94 Aligned_cols=103 Identities=12% Similarity=-0.025 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhC------------------CCCCC-CccchhhHHHHHhhhhhHHHHHHHhhhhHhhcCCC
Q 022031 121 KVAQDEGRHFTLLAARLEELG------------------SSYGA-LPAHDGLWDSAIATSKDLLARLAIEHCVHEARGLD 181 (303)
Q Consensus 121 ~VA~DEarHF~Ll~~rL~eLG------------------~~YGd-~P~H~gLW~~a~~T~~dllaRmAvvp~vlEArGLD 181 (303)
+...||.||=..|++.|---| ++-|+ =|.+.-.+.+.++++..+..|-.
T Consensus 102 ~WtaEE~rHg~aL~~YL~~sg~vdp~~lE~~~~~~i~~g~~~~~~~p~~~~vy~~fqE~aT~v~y~n~------------ 169 (275)
T 1za0_A 102 RWTAEEHLHAIALREYLVVTREVDPVANEDVRVQHVMKGYRAEKYTQVETLVYMAFYERCGAVFCRNL------------ 169 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSCTTTTTCTTC----------CCCHHHHHHHHHHHHHHHHHHHHHH------------
T ss_pred hHhHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH------------
Confidence 568999999999999885433 22220 15555566666665544333211
Q ss_pred CCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHHHHHHHhcCCCccccCCCCCCCcccccccchhhhhHHHHHH
Q 022031 182 VLPTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWFRYLCLRSRDPALLRDSLAPPESEAGENVCTIEENEEVIRK 261 (303)
Q Consensus 182 ~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf~~lc~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (303)
-+..||..-++|+. .|-.||..|.++=.+=++.+.+ .+| +..+..
T Consensus 170 --------a~~~~dPvL~~i~~-~IA~DE~RH~~~y~~~v~~~le---~dp-----------------------d~~~~A 214 (275)
T 1za0_A 170 --------AAQIEEPILAGLID-RIARDEVRHEEFFANLVTHCLD---YTR-----------------------DETIAA 214 (275)
T ss_dssp --------HHHCCSHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH---HSH-----------------------HHHHHH
T ss_pred --------HHhcCChHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH---hCc-----------------------HHHHHH
Confidence 15689999999999 6899999999987777777755 333 334788
Q ss_pred HHHHHHhhc
Q 022031 262 FHAIVRTHF 270 (303)
Q Consensus 262 f~~lv~~~~ 270 (303)
|.+.++++-
T Consensus 215 ~a~~~~~~~ 223 (275)
T 1za0_A 215 IAARAADLD 223 (275)
T ss_dssp HHHHHHHCC
T ss_pred HHHHHhcCc
Confidence 999997663
No 56
>2rcc_A Ribonucleoside-diphosphate reductase subunit beta; NP_241368.1, putative class I ribonucleotide reductase, ribonucleotide reductase; HET: MSE PGE PG4; 1.90A {Bacillus halodurans c-125}
Probab=83.83 E-value=3 Score=39.27 Aligned_cols=106 Identities=12% Similarity=0.051 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCC--C----CC---CCccch--hhHHH--HHh-----hhhhHHHHHHHhhhhHhhcCCC
Q 022031 120 VKVAQDEGRHFTLLAARLEELGS--S----YG---ALPAHD--GLWDS--AIA-----TSKDLLARLAIEHCVHEARGLD 181 (303)
Q Consensus 120 l~VA~DEarHF~Ll~~rL~eLG~--~----YG---d~P~H~--gLW~~--a~~-----T~~dllaRmAvvp~vlEArGLD 181 (303)
...+.+|+.|-..+..-|..+|. + |. ..|.=. .-|-. ..+ +..+++.++.. ..++|+-=+=
T Consensus 113 ~~q~~~E~iHs~sYs~il~tl~~~~e~~~~f~~~~~~p~l~~k~~~i~~~~~~~~~~~~~~~~~~~lva-~~~lEgi~Fy 191 (346)
T 2rcc_A 113 SVLSFQEVVHNQSYSYVLSSLVPKATQDEIFEYWKHDDVLKERNEFIIDGYEKFVDNPTPKTFLESIVY-DVILEGLNFY 191 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHH-HHHHHHTTTH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCChhhHHHHHHHHhcCHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHH-HHHHHHHHHH
Confidence 36789999999999999999964 0 11 111100 00111 000 12355656655 7788877665
Q ss_pred CCHHHHHHHHcCCC-hHHHHHHHhhcchhhhhhHHhhhHHHHHHHHh
Q 022031 182 VLPTTISRFRNGGD-NETAKLLETVVYPEEITHCAAGVRWFRYLCLR 227 (303)
Q Consensus 182 ~~p~~i~kl~~~GD-~~sa~iL~~iI~~DEI~HV~~G~rWf~~lc~~ 227 (303)
.+=.++--|.+.|- .-++.+++ -|.+||.-|+.+|..=|+.+.++
T Consensus 192 sgF~~~~~l~~~g~m~g~~~~i~-~I~RDE~~H~~f~~~l~~~l~~e 237 (346)
T 2rcc_A 192 SGFAFFYNLARNQKMVSTSTMIN-YINRDEQLHVYLFTNIFKELLVE 237 (346)
T ss_dssp HHHHHHHHHHHTTSSHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCchhHHHHHH-HHHhhHHHHHHHHHHHHHHHHhc
Confidence 55555667777774 46677888 68999999999999999988763
No 57
>2oh3_A Rubrerythrin, COG1633: uncharacterized conserved protein; ZP_00055496.1, COG1633: uncharacterized conSer protein; HET: MSE PGE; 2.00A {Magnetospirillum magnetotacticum} SCOP: a.25.1.8
Probab=83.11 E-value=15 Score=30.22 Aligned_cols=127 Identities=18% Similarity=0.068 Sum_probs=76.1
Q ss_pred HHHHHhhHHHHHHHHHHHHHhcCCCCCCC-hhHHHhHHHHHHHHHHHHHHHHHHHHHhCCCCCCCccchhh---------
Q 022031 84 VHSLAHTESWAIDLSWDIVARFGKQEAMP-REFFTDFVKVAQDEGRHFTLLAARLEELGSSYGALPAHDGL--------- 153 (303)
Q Consensus 84 LHaiAHIE~~AIdLa~Dav~RF~~~~~lP-~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~YGd~P~H~gL--------- 153 (303)
|-....+|..|++......-.+. ... ..-..=+.+.|.+|.+|...+.++...... +.+|.-.-+
T Consensus 10 L~~Ai~~E~~~~~~Y~~lA~~~~---~~~~~~~k~~f~~LA~eE~~H~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 84 (167)
T 2oh3_A 10 LAHAIALETEAAERYVELADMME---AHNNLDTATVFRDMARFSTLHGDEIKQRSRALEL--PKLMSWQYRWKTPPEVGD 84 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH---HTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCC--CCCCGGGTSCCCCCCSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH---hCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--CccccccccCCCcHhhhh
Confidence 33344689999998877666331 111 244555668999999999999999776311 111111111
Q ss_pred -HHHHHhhhhhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHHH
Q 022031 154 -WDSAIATSKDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWFR 222 (303)
Q Consensus 154 -W~~a~~T~~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf~ 222 (303)
|.. ....++. .+--+-+-.|..+.+ ++.+-.....|..+.++++. |..||.+|+..=..++.
T Consensus 85 ~~~~--~~~~~~~-~~l~~A~~~E~~a~~---fY~~~a~~~~d~~~k~~~~~-la~eE~~H~~~l~~~~~ 147 (167)
T 2oh3_A 85 ENDI--HYLMTPY-HALRYARDNEIRGME---YYKEAAANSADPEVKRLGAD-FAAEEAEHVVALDKWIE 147 (167)
T ss_dssp C-----CGGGSHH-HHHHHHHHHHHHHHH---HHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred Hhhc--cccCCHH-HHHHHHHHHHHHHHH---HHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 221 1111221 222233566777766 45555666899999999995 79999999864444443
No 58
>3chh_A P-aminobenzoate N-oxygenase; DI-iron oxygenase, oxidoreductase; 2.00A {Streptomyces thioluteus} PDB: 3chi_A 3cht_A* 3chu_A 2jcd_A
Probab=82.33 E-value=20 Score=33.82 Aligned_cols=171 Identities=16% Similarity=0.104 Sum_probs=95.0
Q ss_pred CCCCCCCCCCccccCCCCCCCCCCCCCHhHHHHHHHHH-------HhhHHHHHHHHHHHHHh--cCCCCCCChhHHHhHH
Q 022031 50 VPDRPARLTNVKLVSPSLMPKLGKAGSLQSRQAIVHSL-------AHTESWAIDLSWDIVAR--FGKQEAMPREFFTDFV 120 (303)
Q Consensus 50 ~p~~P~Rp~~~~lv~P~~~p~r~~~~t~~~ra~lLHai-------AHIE~~AIdLa~Dav~R--F~~~~~lP~~Fy~Dwl 120 (303)
.|+.|..| +++++=...|-=..++..+....+-|++ .++|-.=++.+...++. |+. ..+..+..+-+
T Consensus 55 d~~~~~~p--~ellpl~gtp~w~~l~~eqR~~L~~~e~~~~~s~~I~~E~~lv~~~~r~i~~~~~p~--~~~~~~~ya~l 130 (336)
T 3chh_A 55 DTLVPDYP--LEIVPFAEHPLFLAAEPHQRQRVLTGMWIGYNERVIATEQLIAEPAFDLVMHGVFPG--SDDPLIRKSVQ 130 (336)
T ss_dssp CTTSCSSC--GGGCTTTTCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCSTT--TTCHHHHHHHH
T ss_pred CCCCCCCC--hhhccccCCHhHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhccCCC--CCcHHHHHHHH
Confidence 34445554 4555544444322333333333334444 45677777777766664 542 24778888878
Q ss_pred HHHHHHHHHHHHHHHHHH----HhCCC----CCCCccchhhHHHHHhhh---hhHHHHHHHhhhhHhhcCCCCCHHHHHH
Q 022031 121 KVAQDEGRHFTLLAARLE----ELGSS----YGALPAHDGLWDSAIATS---KDLLARLAIEHCVHEARGLDVLPTTISR 189 (303)
Q Consensus 121 ~VA~DEarHF~Ll~~rL~----eLG~~----YGd~P~H~gLW~~a~~T~---~dllaRmAvvp~vlEArGLD~~p~~i~k 189 (303)
+...||++|-.|-.+-.+ ..|.. |..+.+-..+......+. +..+.++++ -++.|-- +| .+...
T Consensus 131 tei~DE~~Hs~Mf~~~~~~~~~~~G~~~~~~~p~~~l~r~l~~~la~~~~~~~~~l~~~a~-~lvaEei-id---~~~r~ 205 (336)
T 3chh_A 131 QAIVDESFHTYMHMLAIDRTRELRKISERPPQPELVTYRRLRRVLADMPEQWERDIAVLVW-GAVAETC-IN---ALLAL 205 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCHHHHHHHHHHTTCCCHHHHHHHHHHH-HHHHHHS-BC---HHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHHccCchhhhhHHHHHHH-HHHHHHH-HH---HHHHH
Confidence 889999999999999998 58885 333331111233332221 122333332 2344542 22 23444
Q ss_pred HHcCCCh-HHHHHHHhhcchhhhhhHHhhhHHHHHHHHhcC
Q 022031 190 FRNGGDN-ETAKLLETVVYPEEITHCAAGVRWFRYLCLRSR 229 (303)
Q Consensus 190 l~~~GD~-~sa~iL~~iI~~DEI~HV~~G~rWf~~lc~~~~ 229 (303)
+..-.+. ..+..+-+|=..||-.|++++..=++.+-.+.+
T Consensus 206 ~~~D~~vQP~vR~v~riHv~DEaRH~~fare~~~~~~~~l~ 246 (336)
T 3chh_A 206 LARDATIQPMHSLITTLHLRDETAHGSIVVEVVRELYARMN 246 (336)
T ss_dssp HHTCSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred hcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 4433332 223333235578999999999998888877655
No 59
>2d5k_A DPS, DPS family protein; four helix bundle, metal binding protein; 1.85A {Staphylococcus aureus subsp}
Probab=82.15 E-value=9.9 Score=31.14 Aligned_cols=88 Identities=16% Similarity=0.165 Sum_probs=54.9
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHhCCC-CCC---------CccchhhHHHHHhhhh-hHHHHHHHhhhhHhhcCCCCCH
Q 022031 116 FTDFVKVAQDEGRHFTLLAARLEELGSS-YGA---------LPAHDGLWDSAIATSK-DLLARLAIEHCVHEARGLDVLP 184 (303)
Q Consensus 116 y~Dwl~VA~DEarHF~Ll~~rL~eLG~~-YGd---------~P~H~gLW~~a~~T~~-dllaRmAvvp~vlEArGLD~~p 184 (303)
..=+-+.+.+|..|+-.+.+|+..||.. .+. ++.-..=| .+...-. ++..--.++-.+-+
T Consensus 42 h~~~~~~~~ee~~had~iaERI~~lGg~p~~~~~~~~~~s~i~~~~~~~-~~~e~l~~~l~~e~~~~~~~~~-------- 112 (156)
T 2d5k_A 42 HVKFEELYNEASQYVDELAERILAVGGNPVGTLTECLEQSIVKEAAKGY-SAEQMVEELSQDFTNISKQLEN-------- 112 (156)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCSSCCCCSCC-CHHHHHHHHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHH--------
Confidence 3334467888889999999999999986 444 22212113 2222222 23333333333333
Q ss_pred HHHHHHHcCCChHHHHHHHhhcchhhhhhH
Q 022031 185 TTISRFRNGGDNETAKLLETVVYPEEITHC 214 (303)
Q Consensus 185 ~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV 214 (303)
+++.....||..|.++|+. |+.+|-.|+
T Consensus 113 -~i~~a~~~~D~~T~~ll~~-~l~e~Ek~~ 140 (156)
T 2d5k_A 113 -AIEIAGNAGDDVSEDMFIG-MQTSVDKHN 140 (156)
T ss_dssp -HHHHHHHHTCHHHHHHHHH-HHHHHHHHH
T ss_pred -HHHHHHHCCCHHHHHHHHH-HHHHHHHHH
Confidence 4555567799999999996 688888886
No 60
>2uw1_A Desaturase, plastid delta4 multifunctional acyl-ACYL carrier desaturase; electron transfer, oxidoreductase, lipid synthesis, fatty AC biosynthesis; HET: GVM; 1.95A {Hedera helix} PDB: 2uw1_B* 1oq4_A 1oq7_A 1oq9_A 1oqb_A 2xz0_A* 2xz1_A* 1afr_A 2j2f_A
Probab=79.95 E-value=13 Score=35.41 Aligned_cols=89 Identities=19% Similarity=0.138 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHHHHHHHH------------------HhCCCCCC--CccchhhHHHHHhhhhhHHHHHHHhhhhHhhcC
Q 022031 120 VKVAQDEGRHFTLLAARLE------------------ELGSSYGA--LPAHDGLWDSAIATSKDLLARLAIEHCVHEARG 179 (303)
Q Consensus 120 l~VA~DEarHF~Ll~~rL~------------------eLG~~YGd--~P~H~gLW~~a~~T~~dllaRmAvvp~vlEArG 179 (303)
-+...||.||=.+|++.|. .-|++-|. =|.+.-.+.+.++++..+..|
T Consensus 112 ~~WtaEEnrHg~aL~~YL~lsgrvDp~~lE~~~~~~i~~Gfd~~~~~~p~~~~vy~sfQE~AT~vsh~------------ 179 (338)
T 2uw1_A 112 RAWTAEENRHGDLLNKYLYLSGRVDMRKIEKTIQYLIGSGMDIKSENSPYLGFIYTSFQERATFISHA------------ 179 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHCCCCCCTTCHHHHHHHHHHHHHHHHHHHH------------
T ss_pred hhHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH------------
Confidence 3568999999998887766 25776653 277777777766665544332
Q ss_pred CCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHHHHHHH
Q 022031 180 LDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWFRYLCL 226 (303)
Q Consensus 180 LD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf~~lc~ 226 (303)
.+.+.-+..||..-++|+. +|-.||..|-.+=.+-++.+-+
T Consensus 180 -----n~~r~A~~~gdPvLa~i~~-~IA~DE~RH~~~Y~~~v~~~le 220 (338)
T 2uw1_A 180 -----NTAKLAQHYGDKKLAHICG-SIASDEKRHATAYTKIVEKLAE 220 (338)
T ss_dssp -----HHHHHHHHTTCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHhcCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHh
Confidence 1112224469999999999 6899999999876666666544
No 61
>3pf7_A Benzoyl-COA oxygenase component B; DIIRON center, epoxidase, benzoyl coenzyme A, oxidoreductase; 1.90A {Azoarcus evansii} PDB: 3per_A 3pm5_A* 3q1g_A
Probab=79.41 E-value=17 Score=36.15 Aligned_cols=126 Identities=17% Similarity=0.197 Sum_probs=80.0
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHH-HhHHHHHHHHHHHHHHHHHHH-HHhCCC------------C
Q 022031 79 SRQAIVHSLAHTESWAIDLSWDIVARFGKQEAMPREFF-TDFVKVAQDEGRHFTLLAARL-EELGSS------------Y 144 (303)
Q Consensus 79 ~ra~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy-~Dwl~VA~DEarHF~Ll~~rL-~eLG~~------------Y 144 (303)
....+|-.-||-|+-.+.---+.+- ..|.-+- .-.+++..||++|...+...| +.+|.+ .
T Consensus 108 ~LiRlI~~haDSEiagve~e~~wi~------~APSL~~k~~L~aiVqDE~gHg~~mlyllae~fG~Dr~e~ad~LL~R~s 181 (481)
T 3pf7_A 108 TLRRIIVTQGDTEPASVEQQRHLGL------TAPSLYDLRNLFQVNVEEGRHLWAMVYLLHAHFGRDGREEGEALLERRS 181 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTGGG------GCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHhhhHHhhchhhhhHHh------cCCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHHHHHHHHHhhcc
Confidence 3455666778899988876433333 2454433 367899999999996444444 555542 5
Q ss_pred CCC--c----cch---hhHHHHHhhhhhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHH
Q 022031 145 GAL--P----AHD---GLWDSAIATSKDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCA 215 (303)
Q Consensus 145 Gd~--P----~H~---gLW~~a~~T~~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~ 215 (303)
||. | +-| -=|-.+-- ..=|..|-+++.+ .-|...+=..-+.++.. |+.||.-|+.
T Consensus 182 Gd~~~pk~L~~FNyPt~~WaD~~~-f~~LvDrAgi~qL--------------~~L~~sSY~PlARamr~-I~kEEafH~~ 245 (481)
T 3pf7_A 182 GDEDNPRILTAFNEKTPDWLSFFM-FTFITDRDGKFQL--------------ASLAESAFDPLARTCKF-MLTEEAHHLF 245 (481)
T ss_dssp TCSSSCCSSGGGSSCCCSHHHHHH-HHHHTHHHHHHHH--------------HHHTTCSBHHHHHHHHH-HHHHHHHHHH
T ss_pred CCcccccccccccCCCCCHHHHHH-HHHhhhHHHHHHH--------------HHHHhCCcHHHHHHHHH-HhhHHHHHHH
Confidence 553 1 111 23544432 3455666666553 33445555566778884 7999999999
Q ss_pred hhhHHHHHHHH
Q 022031 216 AGVRWFRYLCL 226 (303)
Q Consensus 216 ~G~rWf~~lc~ 226 (303)
.|-.|+..+|+
T Consensus 246 ~Ge~gl~rli~ 256 (481)
T 3pf7_A 246 VGESGIARVIQ 256 (481)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999976
No 62
>3dhz_A Ribonucleotide reductase subunit R2F; metal free, hydrogen bond, metal binding protein; 1.63A {Corynebacterium ammoniagenes} SCOP: a.25.1.2 PDB: 1kgo_A 1kgp_A 1oqu_A 1kgn_A
Probab=78.74 E-value=38 Score=31.59 Aligned_cols=143 Identities=12% Similarity=0.003 Sum_probs=82.8
Q ss_pred CHhHHHHHHHHHHhhHHHHHHHH--HHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCCCCCCccchhh
Q 022031 76 SLQSRQAIVHSLAHTESWAIDLS--WDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSSYGALPAHDGL 153 (303)
Q Consensus 76 t~~~ra~lLHaiAHIE~~AIdLa--~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~YGd~P~H~gL 153 (303)
|..-|-.+.|.++=. .+.|-. -+.+-+|......|.. ..=....+..|+.|-..+..-|..+|.. |--+.+
T Consensus 59 t~~Er~~~~~~l~~~--~~~D~iq~~~~~~~~~~~~~~pE~-~~~~~~q~~~E~iHs~sYs~il~tl~~~----~e~~~~ 131 (329)
T 3dhz_A 59 TPQEQLATMRVFTGL--TLLDTIQGTVGAISLLPDAETMHE-EAVYTNIAFMESVHAKSYSNIFMTLAST----PQINEA 131 (329)
T ss_dssp CHHHHHHHHHHHHHH--HHHHHHHHHTHHHHTGGGCSSHHH-HHHHHHHHHHHHHHHHHHHHHHHHHSCH----HHHHHH
T ss_pred CHHHHHHHHHHHHHH--HHHHHHHHHHhHHHHHHHcCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHhCCC----HHHHHH
Confidence 345677777777632 122211 1112234211223422 2223355899999999999999999863 222345
Q ss_pred HHHHHhhhhhHHHHHHHhh---------------hhHhhcCCCCCHHHHHHHHcCCCh-HHHHHHHhhcchhhhhhHHhh
Q 022031 154 WDSAIATSKDLLARLAIEH---------------CVHEARGLDVLPTTISRFRNGGDN-ETAKLLETVVYPEEITHCAAG 217 (303)
Q Consensus 154 W~~a~~T~~dllaRmAvvp---------------~vlEArGLD~~p~~i~kl~~~GD~-~sa~iL~~iI~~DEI~HV~~G 217 (303)
++.. .+...+..|...+- .++|+-=+=.+=.++--|.+.|-. .++.+++ -|.+||.-|+.+|
T Consensus 132 f~~i-~~~p~l~~K~~~i~~~~~~~~~~~~~va~~~lEGi~FysgF~~~~~l~~~g~m~g~~~~i~-~I~RDE~lH~~f~ 209 (329)
T 3dhz_A 132 FRWS-EENENLQRKAKIIMSYYNGDDPLKKKVASTLLESFLFYSGFYLPMYLSSRAKLTNTADIIR-LIIRDESVHGYYI 209 (329)
T ss_dssp HHHH-HHCHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHTTTHHHHHHHHHHHTTTSSHHHHHHHH-HHHHHHHHHHHHH
T ss_pred HHHH-hhCHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccHHHHHH-HHHHHHHHHHHHH
Confidence 5532 23344444444333 344544333333344455666654 5577888 6899999999999
Q ss_pred hHHHHHHHHh
Q 022031 218 VRWFRYLCLR 227 (303)
Q Consensus 218 ~rWf~~lc~~ 227 (303)
...|+.+.++
T Consensus 210 ~~l~~~~~~~ 219 (329)
T 3dhz_A 210 GYKYQQGVKK 219 (329)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHHh
Confidence 9999998663
No 63
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=77.94 E-value=4.3 Score=34.75 Aligned_cols=119 Identities=19% Similarity=0.161 Sum_probs=76.6
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCCCCCCccchhhHHHHHhhh
Q 022031 82 AIVHSLAHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSSYGALPAHDGLWDSAIATS 161 (303)
Q Consensus 82 ~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~YGd~P~H~gLW~~a~~T~ 161 (303)
.|.-+++ -|+.|++-.+--.--. ...++| +.-.=|-+.|.+|..|-..+-++|.. .| .|.
T Consensus 10 nL~~afa-gEs~A~~~Y~~~A~~A-~~eG~~-~iA~~F~~~A~~E~~HA~~~~~~L~~----i~-------------~t~ 69 (170)
T 3pwf_A 10 FLEEAFA-GESMAHMRYLIFAEKA-EQEGFP-NIAKLFRAIAYAEFVHAKNHFIALGK----LG-------------KTP 69 (170)
T ss_dssp HHHHHHH-HHHHHHHHHHHHHHHH-HHTTCH-HHHHHHHHHHHHHHHHHHHHHHHTTC----CC-------------CHH
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHH-HHcCHH-HHHHHHHHHHHHHHHHHHHHHHHHcC----CC-------------ChH
Confidence 3444444 5888888764221111 112454 44455668999999999988888642 12 244
Q ss_pred hhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHHHHHHHhcC
Q 022031 162 KDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWFRYLCLRSR 229 (303)
Q Consensus 162 ~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf~~lc~~~~ 229 (303)
..|...++-- ..|. -+.-|.+++.-+..||..++..++. |..+|-.|. .||+.+-+.-.
T Consensus 70 enL~~a~~gE--~~e~--~~mY~~~a~~A~eeg~~~~a~~f~~-i~~~E~~H~----~~~~~~l~~l~ 128 (170)
T 3pwf_A 70 ENLQMGIEGE--TFEV--EEMYPVYNKAAEFQGEKEAVRTTHY-ALEAEKIHA----ELYRKAKEKAE 128 (170)
T ss_dssp HHHHHHHHHH--HHHH--HTHHHHHHHHHHHHTCHHHHHHHHH-HHHHHHHHH----HHHHHHHHHHT
T ss_pred HHHHHHHHhH--HHHH--HHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHH----HHHHHHHHHHh
Confidence 4454433322 2222 2455788999999999999999995 799999997 57777665544
No 64
>3k6c_A Uncharacterized protein NE0167; structural genomics, MCSG, unknown function protein, PSI, PR structure initiative; 2.20A {Nitrosomonas europaea}
Probab=76.92 E-value=7.8 Score=30.67 Aligned_cols=52 Identities=21% Similarity=0.190 Sum_probs=39.3
Q ss_pred HHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhC
Q 022031 84 VHSLAHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELG 141 (303)
Q Consensus 84 LHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG 141 (303)
+=+|. =|+-|||+.--.+--.. -.+-..=+..++.||-+|+.|+.+.|+.+-
T Consensus 24 i~sl~-~EleAI~~Y~q~a~~~~-----d~~~k~vl~~i~~EEkeH~g~~lelLrr~D 75 (95)
T 3k6c_A 24 IISLR-EELEAVDLYNQRVNACK-----DKELKAILAHNRDEEKEHAAMLLEWIRRCD 75 (95)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHH-HHHHHHHHHHHHHHhCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 33665 59999999977666553 134455577899999999999999988753
No 65
>2p1i_A Ribonucleotide reductase, small chain; F222 twinning, plasmodb PY03671, S genomics consortium, SGC, oxidoreductase; 2.70A {Plasmodium yoelii yoelii}
Probab=76.86 E-value=8.2 Score=36.47 Aligned_cols=104 Identities=12% Similarity=0.050 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCC-------CCCCccchhhHHHHH---h---hhhhHHHHHHHhhhhHhhcCCCCCHHH
Q 022031 120 VKVAQDEGRHFTLLAARLEELGSS-------YGALPAHDGLWDSAI---A---TSKDLLARLAIEHCVHEARGLDVLPTT 186 (303)
Q Consensus 120 l~VA~DEarHF~Ll~~rL~eLG~~-------YGd~P~H~gLW~~a~---~---T~~dllaRmAvvp~vlEArGLD~~p~~ 186 (303)
...+.+|+.|-..+..-|..+|.+ |-.+--...|-+.+. + +..+++.++... .++|+-=+=.+=.+
T Consensus 124 ~~q~~~E~iHs~sYs~il~tl~~d~~e~~~~f~~~~~~p~l~~K~~~i~~~~~~~~~~~~~lva~-~~lEGi~FysgF~~ 202 (349)
T 2p1i_A 124 SFQIAVENIHSETYSLLIDNYIKDEKERLNLFHAIENIPAIKNKALWAAKWINDTNSFAERIVAN-ACVEGILFSGSFCA 202 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCSHHHHHHTTHHHHSCHHHHHHHHHHHHTSSCSSCHHHHHHHH-HHHTTTTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHcCchHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 467899999999999999999853 221111111211111 0 112455565555 45776544333333
Q ss_pred HHHHHcCCCh-HHHHHHHhhcchhhhhhHHhhhHHHHHHH
Q 022031 187 ISRFRNGGDN-ETAKLLETVVYPEEITHCAAGVRWFRYLC 225 (303)
Q Consensus 187 i~kl~~~GD~-~sa~iL~~iI~~DEI~HV~~G~rWf~~lc 225 (303)
+--|.+.|-. .++.+++ -|.+||.-|+.+|..=|+.+.
T Consensus 203 ~~~l~~~g~m~g~~~~i~-~I~RDE~~H~~f~~~l~~~l~ 241 (349)
T 2p1i_A 203 IFWFKKQNKLHGLTFSNE-LISRDEGLHTDFNCLIYSLLE 241 (349)
T ss_dssp HHHHHTTTCSTTHHHHHH-HHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHhcCCCccHHHHHH-HHHHHHHHHHHHHHHHHHHHh
Confidence 4466777754 5577888 689999999999977666554
No 66
>3iq1_A DPS family protein; csgid, SAD, niaid, metal transport, STRU genomics, center for structural genomics of infectious DISE; 1.67A {Vibrio cholerae o1 biovar el tor}
Probab=76.23 E-value=15 Score=30.36 Aligned_cols=88 Identities=16% Similarity=0.147 Sum_probs=56.3
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHhCCC-CCC---------CccchhhHHHHHhhhhhHHHHHHHhhhhHhhcCCCCCHHH
Q 022031 117 TDFVKVAQDEGRHFTLLAARLEELGSS-YGA---------LPAHDGLWDSAIATSKDLLARLAIEHCVHEARGLDVLPTT 186 (303)
Q Consensus 117 ~Dwl~VA~DEarHF~Ll~~rL~eLG~~-YGd---------~P~H~gLW~~a~~T~~dllaRmAvvp~vlEArGLD~~p~~ 186 (303)
.=+-+.+.++..|+-.+.+|+..||.. .|. ++-..+-++.-.-...++..--.++-.+-| .
T Consensus 54 ~~~ee~~~~~~~~~D~lAERI~~LGg~P~~t~~~~~~~s~i~e~~~~~~~~eml~~ll~~~~~~i~~~r~---------~ 124 (159)
T 3iq1_A 54 AKFEEIYTDLQLKIDELAERILTLSARPMHSFSGYLKAAQIKEHTDSIDGRSSMQGLVDGFSILLHQQRD---------I 124 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCSSCCCCCCCSHHHHHHHHHHHHHHHHHHHHH---------H
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHCCCCccCCCCCHHHHHHHHHHHHHHHHHHHHH---------H
Confidence 345578899999999999999999984 332 332223332222222233334444444433 4
Q ss_pred HHHHHcCCChHHHHHHHhhcchhhhhhH
Q 022031 187 ISRFRNGGDNETAKLLETVVYPEEITHC 214 (303)
Q Consensus 187 i~kl~~~GD~~sa~iL~~iI~~DEI~HV 214 (303)
++.....||..|+++|.. |+.++=.|+
T Consensus 125 i~~ae~~~D~~T~dll~~-~l~~~Ek~~ 151 (159)
T 3iq1_A 125 LELAGETGDEGTSALMSD-YIREQEKLV 151 (159)
T ss_dssp HHHHHHHTCHHHHHHHHH-HHHHHHHHH
T ss_pred HHHHhHcCCHHHHHHHHH-HHHHHHHHH
Confidence 666778899999999996 577777774
No 67
>3n37_A Ribonucleoside-diphosphate reductase 2 subunit BE; ribonucleotide reductase, four-helix bundle, dimanganese CLU oxidoreductase; 1.65A {Escherichia coli} PDB: 3n38_A 3n39_B* 3n3a_B* 3n3b_B* 1r2f_A 2bq1_I* 2r2f_A
Probab=76.04 E-value=11 Score=35.10 Aligned_cols=101 Identities=14% Similarity=0.028 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCCccchhhHHHHHhhhhhHHHHHHHhh---------------hhHhhcCCCCCH
Q 022031 120 VKVAQDEGRHFTLLAARLEELGSSYGALPAHDGLWDSAIATSKDLLARLAIEH---------------CVHEARGLDVLP 184 (303)
Q Consensus 120 l~VA~DEarHF~Ll~~rL~eLG~~YGd~P~H~gLW~~a~~T~~dllaRmAvvp---------------~vlEArGLD~~p 184 (303)
...+..|+.|-..+..-|..+|.. |--+.+++.. .+...+..|...+- .++|+-=+=.+=
T Consensus 92 ~~q~~~E~iHs~sYs~il~tl~~~----~e~~~~f~~i-~~~p~l~~K~~~i~~~~~~~~~~~~~va~~~lEgi~Fys~F 166 (319)
T 3n37_A 92 SNISFMEAVHARSYSSIFSTLCQT----KDVDAAYAWS-EENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGF 166 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCH----HHHHHHHHHH-HHCHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHTTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCC----HHHHHHHHHH-hhCHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHH
Confidence 355899999999999999999863 2223455432 23344444444333 344544333333
Q ss_pred HHHHHHHcCCCh-HHHHHHHhhcchhhhhhHHhhhHHHHHHHH
Q 022031 185 TTISRFRNGGDN-ETAKLLETVVYPEEITHCAAGVRWFRYLCL 226 (303)
Q Consensus 185 ~~i~kl~~~GD~-~sa~iL~~iI~~DEI~HV~~G~rWf~~lc~ 226 (303)
.++--|.+.|-. .++.+++ -|.+||.-|+.+|...|+.+.+
T Consensus 167 ~~~~~l~~~g~m~g~~~~i~-~I~RDE~~H~~f~~~l~~~~~~ 208 (319)
T 3n37_A 167 WLPMYFSSRGKLTNTADLIR-LIIRDEAVHGYYIGYKYQKNME 208 (319)
T ss_dssp HHHHHHHHTTCSHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCCchhHHHHHH-HHHHhHHHHHHHHHHHHHHHHH
Confidence 344455666654 5577888 6899999999999999999865
No 68
>1mxr_A Ribonucleotide reductase R2; radical protein, DI iron, oxidoreductase; 1.42A {Escherichia coli} SCOP: a.25.1.2 PDB: 1jpr_A 1jqc_A 1xik_A 3uus_E* 1yfd_A 1piy_A 1r65_A 2xof_A* 1biq_B* 1rsv_A 1piz_A 1piu_A 1pim_A 1rsr_A 1biq_A* 1rib_A 1mrr_A 1rnr_A* 1pj0_A 1pj1_A ...
Probab=75.69 E-value=4.2 Score=38.76 Aligned_cols=138 Identities=14% Similarity=0.087 Sum_probs=80.8
Q ss_pred CHhHHHHHHHHHHhhHHHHHHHH--HHHHHhcCCCCCCC--hhHHHhHHHHHHHHHHHHHHHHHHHHHhCCCCCCCccch
Q 022031 76 SLQSRQAIVHSLAHTESWAIDLS--WDIVARFGKQEAMP--REFFTDFVKVAQDEGRHFTLLAARLEELGSSYGALPAHD 151 (303)
Q Consensus 76 t~~~ra~lLHaiAHIE~~AIdLa--~Dav~RF~~~~~lP--~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~YGd~P~H~ 151 (303)
+..-|-.+.|.++= |.+.|-. -+.+-+|...-..| ..||.- .+..|+.|-+.+..-|..++.+=+
T Consensus 66 t~~Er~~~~~~l~~--~~~~Dsiv~~~~~~~~~~~v~~pE~~~~l~~---~~~~E~iHs~sYs~il~tl~~~~~------ 134 (375)
T 1mxr_A 66 PEHEKHIFISNLKY--QTLLDSIQGRSPNVALLPLISIPELETWVET---WAFSETIHSRSYTHIIRNIVNDPS------ 134 (375)
T ss_dssp CHHHHHHHHHHHHH--HHHHHHHHHHHHHHHTGGGBCSHHHHHHHHH---HHHHHHHHHHHHHHHHHTTCSCHH------
T ss_pred CHHHHHHHHHHHHH--HHHHHHHHHHhhHHHHHHhCCcHHHHHHHHH---HHHHHHHHHHHHHHHHHHHCCCHH------
Confidence 44457777777754 2333332 11223443212233 235544 459999999999999999975422
Q ss_pred hhHHHHHh----------------------------------------------hhhhHHHHHHHhhhhHhhcCCCCCHH
Q 022031 152 GLWDSAIA----------------------------------------------TSKDLLARLAIEHCVHEARGLDVLPT 185 (303)
Q Consensus 152 gLW~~a~~----------------------------------------------T~~dllaRmAvvp~vlEArGLD~~p~ 185 (303)
.++++... +..+++.++...- ++|+-=+=++=.
T Consensus 135 e~f~~i~~~p~i~~Ka~~i~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lva~~-~lEgi~FysgF~ 213 (375)
T 1mxr_A 135 VVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVN-ALEAIRFYVSFA 213 (375)
T ss_dssp HHHHHHHHCHHHHHHHTTHHHHHHHHHHHHHHHHHHCSEEEEETTEEEEECHHHHHHHHHHHHHHHH-HHHHTHHHHHHH
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHhhhhhhhccchhhcccccccccccchhHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 23333221 1123443443332 566543333333
Q ss_pred HHHHHHcCCCh-HHHHHHHhhcchhhhhhHHhhhHHHHHHHH
Q 022031 186 TISRFRNGGDN-ETAKLLETVVYPEEITHCAAGVRWFRYLCL 226 (303)
Q Consensus 186 ~i~kl~~~GD~-~sa~iL~~iI~~DEI~HV~~G~rWf~~lc~ 226 (303)
.+--|.+.|-. -++.+++ -|.+||.-|+.+|..=|+.+.+
T Consensus 214 ~~~~l~~~g~m~G~~~~i~-lI~RDE~lH~~~~~~l~~~l~~ 254 (375)
T 1mxr_A 214 CSFAFAERELMEGNAKIIR-LIARDEALHLTGTQHMLNLLRS 254 (375)
T ss_dssp HHHHHHHTTCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCccHHHHHH-HHHHHHHHHHHHHHHHHHHHhc
Confidence 44467777765 4577888 6899999999999988887765
No 69
>1o9r_A Agrobacterium tumefaciens DPS; iron-binding protein, DNA protection from oxidative damage, DNA-binding, iron- binding protein; 1.45A {Agrobacterium tumefaciens} SCOP: a.25.1.1 PDB: 3ge4_A*
Probab=75.66 E-value=19 Score=29.72 Aligned_cols=112 Identities=12% Similarity=0.064 Sum_probs=63.9
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCh-hHHHhHHHHHHHHHHHHHHHHHHHHHhCCC-CCCC---------cc-chhhHHHH
Q 022031 90 TESWAIDLSWDIVARFGKQEAMPR-EFFTDFVKVAQDEGRHFTLLAARLEELGSS-YGAL---------PA-HDGLWDSA 157 (303)
Q Consensus 90 IE~~AIdLa~Dav~RF~~~~~lP~-~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~-YGd~---------P~-H~gLW~~a 157 (303)
-|+-++.-..-.-|=. .+.-. ....=+-+.+.+|..|+-.+.+|+..||.. .|.+ +- ..|-++.-
T Consensus 28 ~~~~l~~q~~~~hw~v---~G~~f~~lh~~~ee~~~e~~~~aD~lAERI~~LGg~P~~~~~~~~~~s~i~e~~~~~~~~~ 104 (162)
T 1o9r_A 28 SVIDLALVTKQAHWNL---KGPQFIAVHELLDTFRTQLDNHGDTIAERVVQLGGTALGSLQAVSSTTKLKAYPTDIYKIH 104 (162)
T ss_dssp HHHHHHHHHHHHHHHC---BSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCSCCCCSSCCBHH
T ss_pred HHHHHHHHHHhhhhhe---ECcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhHCCCCCCCCCCCCHH
Confidence 4555555554443322 12222 222334467788899999999999999975 3321 10 11112111
Q ss_pred HhhhhhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhH
Q 022031 158 IATSKDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHC 214 (303)
Q Consensus 158 ~~T~~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV 214 (303)
.-...++..--.++..+-| .++.....||..|+++|.. |+.++-.|+
T Consensus 105 eml~~~l~~~~~~i~~~r~---------~i~~a~~~~D~~T~dll~~-il~~~Ek~~ 151 (162)
T 1o9r_A 105 DHLDALIERYGEVANMIRK---------AIDDSDEAGDPTTADIFTA-ASRDLDKSL 151 (162)
T ss_dssp HHHHHHHHHHHHHHHHHHH---------HHHHHHHTTCHHHHHHHHH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH---------HHHHHhhCCCHHHHHHHHH-HHHHHHHHH
Confidence 1112233333344444333 4666778999999999996 688888886
No 70
>2yjk_A AFP, DPS; metal-binding protein, iron uptake, ferritin fold; 2.00A {Microbacterium arborescens} PDB: 2yjj_A
Probab=74.91 E-value=16 Score=30.38 Aligned_cols=85 Identities=11% Similarity=-0.072 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCC-CCCC---------ccchhhHHHHHhhhhhHHHHHHHhhhhHhhcCCCCCHHHHH
Q 022031 119 FVKVAQDEGRHFTLLAARLEELGSS-YGAL---------PAHDGLWDSAIATSKDLLARLAIEHCVHEARGLDVLPTTIS 188 (303)
Q Consensus 119 wl~VA~DEarHF~Ll~~rL~eLG~~-YGd~---------P~H~gLW~~a~~T~~dllaRmAvvp~vlEArGLD~~p~~i~ 188 (303)
+-+.+.+|..|+-.+.+|+..||.. .|.+ +...|-++.-.-...++..--.++..+-| .+
T Consensus 58 ~ee~~~e~~~~aD~lAERI~~LGg~P~~t~~~~~~~si~e~~~~~~~~~eml~~~l~~~~~~i~~~r~---------~i- 127 (161)
T 2yjk_A 58 LDSVVAHAQDYADTAAERIVALGLPIDSRVSTMAEKTSTAVPAGFAQWQDEIKAIVSDIDAALVDLQA---------AI- 127 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHTCCCCSCSSCEEHHHHHHHHHHHHHHHHHHHHH---------HH-
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHHHHHHH---------HH-
Confidence 3466778889999999999999975 3322 11112111111122344444455554444 34
Q ss_pred HHHcCCChHHHHHHHhhcchhhhhhH
Q 022031 189 RFRNGGDNETAKLLETVVYPEEITHC 214 (303)
Q Consensus 189 kl~~~GD~~sa~iL~~iI~~DEI~HV 214 (303)
.....||..|+++|.. |+.++-.|+
T Consensus 128 ~a~~~~D~~T~dll~~-il~~~Ek~~ 152 (161)
T 2yjk_A 128 DGLDEVDLTSQDVAIE-IKRGVDKDR 152 (161)
T ss_dssp HHHTTTCHHHHHHHHH-HHHHHHHHH
T ss_pred HhcccCCHHHHHHHHH-HHHHHHHHH
Confidence 5677899999999996 688888885
No 71
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=74.89 E-value=6.4 Score=34.52 Aligned_cols=130 Identities=15% Similarity=0.127 Sum_probs=79.2
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCCCC--CCccchhhHHHHHh
Q 022031 82 AIVHSLAHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSSYG--ALPAHDGLWDSAIA 159 (303)
Q Consensus 82 ~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~YG--d~P~H~gLW~~a~~ 159 (303)
..|-+...-|+.|.+...-..--.. ..+++ +.-.=|-.+|.+|..|-.++.++|..+|...= ..|+.. |. .
T Consensus 31 ~nL~~a~~gE~~a~~~Y~~~A~~A~-~eG~~-~iA~~F~~~A~~E~~HA~~~~~~l~~l~~~~~i~~~p~~~--~g---s 103 (202)
T 1yuz_A 31 ENLKAAIAGETGAHAKYTAFAKAAR-EQGYE-QIARLFEATAAAELIHIGLEYALVAEMEPGYEKPTVAAPS--AY---S 103 (202)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH-HTTCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCCCC--CC--CC---C
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HCCcH-HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCccC--CC---C
Confidence 3455555679999877533322111 12333 23344457899999999999999999976521 123311 11 2
Q ss_pred hhhhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHHHHHHHh
Q 022031 160 TSKDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWFRYLCLR 227 (303)
Q Consensus 160 T~~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf~~lc~~ 227 (303)
|...|.. |+-+=..|. -+.=|.+++.-+..||..++..++. |..+|..|- .||+.+-++
T Consensus 104 t~enL~~--a~~gE~~E~--t~my~~~a~~A~eEgd~~~a~~f~~-i~~~E~~H~----~~~~~ll~~ 162 (202)
T 1yuz_A 104 CDLNLIS--GANGEIYET--SDMYPAFIRKAQEEGNSKAVHVFTR-AKLAESVHA----ERYLAAYND 162 (202)
T ss_dssp HHHHHHH--HHHHHHHHH--HTHHHHHHHHHHHHTCHHHHHHHHH-HHHHHHHHH----HHHHHHHHT
T ss_pred HHHHHHH--HHHhHHHHH--HHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHH----HHHHHHHHH
Confidence 3323322 222222222 2345778889999999999999994 799999996 566666554
No 72
>1z6o_A Ferritin light chain; metal binding protein, iron storage; 1.91A {Trichoplusia NI} SCOP: a.25.1.1
Probab=74.81 E-value=43 Score=29.28 Aligned_cols=69 Identities=12% Similarity=0.031 Sum_probs=54.6
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhcCC-CCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCC--CCCCcc
Q 022031 80 RQAIVHSLAHTESWAIDLSWDIVARFGK-QEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSS--YGALPA 149 (303)
Q Consensus 80 ra~lLHaiAHIE~~AIdLa~Dav~RF~~-~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~--YGd~P~ 149 (303)
-...|....+.|+.|+.+.+-...=|.. ..++| .|..=+-+.+.||-.|...|.+++..+|.. +.+++.
T Consensus 37 v~~~LN~qin~El~As~~Yl~ma~~f~~dd~~l~-gfa~~f~~~s~EE~~HA~kli~yi~~rGg~~~l~~i~~ 108 (212)
T 1z6o_A 37 VATELQAYAKLHLERSYDYLLSAAYFNNYQTNRA-GFSKLFKKLSDEAWSKTIDIIKHVTKRGDKMNFDQHST 108 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSTTTCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCTTCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccchH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcccccccc
Confidence 5788999999999999999988777742 23454 455555678999999999999999999985 555543
No 73
>3k6c_A Uncharacterized protein NE0167; structural genomics, MCSG, unknown function protein, PSI, PR structure initiative; 2.20A {Nitrosomonas europaea}
Probab=74.50 E-value=3.1 Score=32.97 Aligned_cols=44 Identities=25% Similarity=0.306 Sum_probs=38.9
Q ss_pred CCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHHHHH
Q 022031 180 LDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWFRYL 224 (303)
Q Consensus 180 LD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf~~l 224 (303)
|++--.+.++.....|....+||.. |-.||+.||+--..|++++
T Consensus 31 leAI~~Y~q~a~~~~d~~~k~vl~~-i~~EEkeH~g~~lelLrr~ 74 (95)
T 3k6c_A 31 LEAVDLYNQRVNACKDKELKAILAH-NRDEEKEHAAMLLEWIRRC 74 (95)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHh
Confidence 4445568999999999999999996 7999999999999999987
No 74
>2chp_A MRGA, metalloregulation DNA-binding stress protein; DNA-binding protein, DPS, dodecameric, ferritin; 2.0A {Bacillus subtilis}
Probab=73.50 E-value=29 Score=28.36 Aligned_cols=83 Identities=16% Similarity=0.097 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCC-CC------------CCccchhhHHHHHhhhhhHHHHHHHhhhhHhhcCCCCCHH
Q 022031 119 FVKVAQDEGRHFTLLAARLEELGSS-YG------------ALPAHDGLWDSAIATSKDLLARLAIEHCVHEARGLDVLPT 185 (303)
Q Consensus 119 wl~VA~DEarHF~Ll~~rL~eLG~~-YG------------d~P~H~gLW~~a~~T~~dllaRmAvvp~vlEArGLD~~p~ 185 (303)
+-+.+.+|..|+-.+.+|+..||.. .| +.|.....=+|. ..++..--.++..+-|
T Consensus 50 ~ee~~~e~~~~~D~lAERI~~LGg~P~~~~~~~~~~s~i~e~~~~~~~~eml---~~~l~~~~~~i~~~r~--------- 117 (153)
T 2chp_A 50 FEELYDHAAETVDTIAERLLAIGGQPVATVKEYTEHASITDGGNETSASEMV---QALVNDYKQISSESKF--------- 117 (153)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCSSCSCCCCCSHHHHH---HHHHHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhHCCCCCCCCCCCHHHHH---HHHHHHHHHHHHHHHH---------
Confidence 3456778889999999999999975 33 222211111221 2234444444444433
Q ss_pred HHHHHHcCCChHHHHHHHhhcchhhhhhH
Q 022031 186 TISRFRNGGDNETAKLLETVVYPEEITHC 214 (303)
Q Consensus 186 ~i~kl~~~GD~~sa~iL~~iI~~DEI~HV 214 (303)
.++.....||..|+++|.. |+.++-.|+
T Consensus 118 ~i~~a~~~~D~~T~dll~~-il~~~Ek~~ 145 (153)
T 2chp_A 118 VIGLAEENQDNATADLFVG-LIEEVEKQV 145 (153)
T ss_dssp HHHHHHHTTCHHHHHHHHH-HHHHHHHHH
T ss_pred HHHHHhhCCCHHHHHHHHH-HHHHHHHHH
Confidence 4666778899999999996 688887875
No 75
>1zpy_A Hypothetical protein NE0167; structural genomics, MCSG, PSI, protein structure initiative; 2.20A {Nitrosomonas europaea atcc 19718} PDB: 3k6c_A
Probab=72.98 E-value=3.6 Score=32.61 Aligned_cols=40 Identities=25% Similarity=0.265 Sum_probs=36.9
Q ss_pred HHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHHHHH
Q 022031 184 PTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWFRYL 224 (303)
Q Consensus 184 p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf~~l 224 (303)
..+.++.....|.+..+|+.. |-.||+.||+--.+|++++
T Consensus 35 ~~Y~q~A~~t~D~evk~vl~~-iadEEkeH~g~~l~~Lrr~ 74 (95)
T 1zpy_A 35 DLYNQRVNACKDKELKAILAH-NRDEEKEHAAMLLEWIRRC 74 (95)
T ss_dssp HHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHh
Confidence 468999999999999999996 7999999999999999987
No 76
>3mjo_A Ribonucleotide reductase subunit R2F; Mn ribonucleotide reductase, RNR, radical enzyme, split SIGN metallocofactor; 1.36A {Corynebacterium ammoniagenes} SCOP: a.25.1.2 PDB: 1uzr_A*
Probab=71.46 E-value=9.6 Score=35.14 Aligned_cols=102 Identities=13% Similarity=0.025 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCCccchhhHHHHHhhhhhHHHHHHHhhhhH---------------hhcCCCCCH
Q 022031 120 VKVAQDEGRHFTLLAARLEELGSSYGALPAHDGLWDSAIATSKDLLARLAIEHCVH---------------EARGLDVLP 184 (303)
Q Consensus 120 l~VA~DEarHF~Ll~~rL~eLG~~YGd~P~H~gLW~~a~~T~~dllaRmAvvp~vl---------------EArGLD~~p 184 (303)
...+..|+.|-..+..-|..+|.. |--+.+++.. .+...+..|...+-... |+-=+=.+=
T Consensus 101 ~~q~~~E~iHs~sYs~il~tl~~~----~e~~~~f~~i-~~~p~l~~K~~~i~~~~~~~~~~~~~va~~~lEGi~FysgF 175 (296)
T 3mjo_A 101 TNIAFMESVHAKSYSNIFMTLAST----PQINEAFRWS-EENENLQRKAKIIMSYYNGDDPLKKKVASTLLESFLFYSGF 175 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCH----HHHHHHHHHH-HHCHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHTHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCC----HHHHHHHHHH-hcCHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHH
Confidence 355899999999999999999863 2223455533 23345555554444433 332111111
Q ss_pred HHHHHHHcCCCh-HHHHHHHhhcchhhhhhHHhhhHHHHHHHHh
Q 022031 185 TTISRFRNGGDN-ETAKLLETVVYPEEITHCAAGVRWFRYLCLR 227 (303)
Q Consensus 185 ~~i~kl~~~GD~-~sa~iL~~iI~~DEI~HV~~G~rWf~~lc~~ 227 (303)
.++--|.+.|-. .++.+++ -|.+||.-|+.+|...|+.+.++
T Consensus 176 ~~~~~l~~~g~m~g~~~~i~-~I~RDE~lH~~f~~~l~~~l~~~ 218 (296)
T 3mjo_A 176 YLPMYLSSRAKLTNTADIIR-LIIRDESVHGYYIGYKYQQGVKK 218 (296)
T ss_dssp HHHHHHHHTTSSHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhCCCcchHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 222234555654 4577888 68999999999999999999663
No 77
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=71.26 E-value=10 Score=32.68 Aligned_cols=129 Identities=21% Similarity=0.177 Sum_probs=76.6
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCC---CCCCccchhhHHHHH
Q 022031 82 AIVHSLAHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSS---YGALPAHDGLWDSAI 158 (303)
Q Consensus 82 ~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~---YGd~P~H~gLW~~a~ 158 (303)
..|-.--.-|+.|..+.+-...-+.. .++|. +-.=+...|.+|..|...+-++|. |.. -+.-|+. .|.
T Consensus 11 ~~Ln~a~~~E~~A~~~Yl~~A~~a~~-~G~~~-iA~~f~~~A~eE~~HA~~~~~~l~--gg~~~i~~~~p~~--~~~--- 81 (191)
T 1lko_A 11 KNILTAFAGESQARNRYNYFGGQAKK-DGFVQ-ISDIFAETADQEREHAKRLFKFLE--GGDLEIVAAFPAG--IIA--- 81 (191)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-TTCHH-HHHHHHHHHHHHHHHHHHHHHHCC--SSCCCCCCCCCCC--CCC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-CCcHH-HHHHHHHHHHHHHHHHHHHHHHHc--CCCccccCcCCcc--ccC---
Confidence 34444445799999998776655532 24543 333344689999999999999997 532 1123442 221
Q ss_pred hhhhhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHHHHH
Q 022031 159 ATSKDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWFRYL 224 (303)
Q Consensus 159 ~T~~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf~~l 224 (303)
.|.+.|. .|+-+=..| --+.=|.+++.-+..||..++..|+ -|..+|+.|-..=.+-+..+
T Consensus 82 s~~e~l~--~al~~E~~e--~t~~y~~~~~~A~eegd~~~~~~f~-~~~~~E~ehe~~~~~~l~~l 142 (191)
T 1lko_A 82 DTHANLI--ASAAGEHHE--YTEMYPSFARIAREEGYEEIARVFA-SIAVAEEFHEKRFLDFARNI 142 (191)
T ss_dssp CHHHHHH--HHHHHHHHH--HHTHHHHHHHHHHHHTCHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHH--HHHHhhHHH--HHHHHHHHHHHHHHhCcHHHHHHHH-HHHHHHHHHHHHHHHHHHhh
Confidence 1211121 111111111 1123456788888899999999999 47999999975433444333
No 78
>2o1z_A Ribonucleotide reductase subunit R2; small subunit ribonucleotide reductase, oxidoreductase, DNA replication, iron, DIIRON, radical, R2 subunit; 2.40A {Plasmodium vivax}
Probab=70.37 E-value=8.3 Score=35.84 Aligned_cols=101 Identities=11% Similarity=0.008 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCCccchhhHHHHH----------------hhhhhHHHHHHHhhhhHhhcCCCCC
Q 022031 120 VKVAQDEGRHFTLLAARLEELGSSYGALPAHDGLWDSAI----------------ATSKDLLARLAIEHCVHEARGLDVL 183 (303)
Q Consensus 120 l~VA~DEarHF~Ll~~rL~eLG~~YGd~P~H~gLW~~a~----------------~T~~dllaRmAvvp~vlEArGLD~~ 183 (303)
...+.+|+.|-..+..-|..++- |-+--+.++++.. ++..++..++...- ++|+-=+=.+
T Consensus 123 ~~q~~~E~iHs~sYs~il~tl~~---d~~e~~~~f~~~~~~p~l~~K~~~i~~~~~~~~~~~~~lva~~-~lEGi~fysg 198 (311)
T 2o1z_A 123 AFQIAVENIHSETYSLLIDNYIK---DEKERMNLFHAIENIPAVKNKALWAAKWINDTNSFAERIVANA-CVEGILFSGS 198 (311)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCC---CHHHHHHHHHHHTTSHHHHHHHHHHHHHSSTTSCHHHHHHHHH-HHHHTTTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCC---CHHHHHHHHHHHhcCHHHHHHHHHHHHHHcCccHHHHHHHHHH-HHHHHHHHHH
Confidence 36789999999999999999873 2122223333211 01234555555443 5776544333
Q ss_pred HHHHHHHHcCCCh-HHHHHHHhhcchhhhhhHHhhhHHHHHHH
Q 022031 184 PTTISRFRNGGDN-ETAKLLETVVYPEEITHCAAGVRWFRYLC 225 (303)
Q Consensus 184 p~~i~kl~~~GD~-~sa~iL~~iI~~DEI~HV~~G~rWf~~lc 225 (303)
=.++--|.+.|-. .++.+++ -|.+||.-|+.+|..=|+.+.
T Consensus 199 F~~~~~l~~~g~m~g~~~~i~-~I~RDE~~H~~f~~~l~~~l~ 240 (311)
T 2o1z_A 199 FCAIFWFKKQNKLHGLTFSNE-LISRDEGLHTDFNCLIYSLLE 240 (311)
T ss_dssp HHHHHHHHHTTCCHHHHHHHH-HHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHcCCcccHHHHHH-HHHHHHHHHHHHHHHHHHHHh
Confidence 3344456666754 5577888 689999999999977666553
No 79
>2bk6_A Non-heme iron-containing ferritin; DPS (DNA binding protein from starved cells), ferroxidase center, mutagenesis study; 2.19A {Listeria innocua} SCOP: a.25.1.1 PDB: 1qgh_A 2bjy_A 2iy4_A 2bkc_A
Probab=69.21 E-value=28 Score=28.53 Aligned_cols=86 Identities=14% Similarity=0.087 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCC-CCC---------Cccc-hhhH-HHHHhhhhhHHHHHHHhhhhHhhcCCCCCHHH
Q 022031 119 FVKVAQDEGRHFTLLAARLEELGSS-YGA---------LPAH-DGLW-DSAIATSKDLLARLAIEHCVHEARGLDVLPTT 186 (303)
Q Consensus 119 wl~VA~DEarHF~Ll~~rL~eLG~~-YGd---------~P~H-~gLW-~~a~~T~~dllaRmAvvp~vlEArGLD~~p~~ 186 (303)
+-+.+.+|..|+-.+.+|+..||.. .|. ++-. .|-+ +.-.-...++..--.++..+-| .
T Consensus 46 ~ee~~~e~~~~~D~lAERI~~Lgg~P~~~~~~~~~~s~l~e~~~~~~~~~~eml~~~l~~~~~~i~~~r~---------~ 116 (156)
T 2bk6_A 46 MDDLYSEFGEQMDEVAERLLAIGGSPFSTLKEFLENASVEEAPYTKPKTMDQLMEDLVGTLELLRDEYKQ---------G 116 (156)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCSCCCCCCSCCCHHHHHHHHHHHHHHHHHHHHH---------H
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH---------H
Confidence 3456778889999999999999975 331 2211 1111 2111122244444444444443 3
Q ss_pred HHHHHcCCChHHHHHHHhhcchhhhhhH
Q 022031 187 ISRFRNGGDNETAKLLETVVYPEEITHC 214 (303)
Q Consensus 187 i~kl~~~GD~~sa~iL~~iI~~DEI~HV 214 (303)
++.....||..|+++|.. |+.+|-.|+
T Consensus 117 i~~a~~~~D~~T~dll~~-il~~~Ek~~ 143 (156)
T 2bk6_A 117 IELTDKEGDDVTNDMLIA-FKASIDKHI 143 (156)
T ss_dssp HHHHHHHTCHHHHHHHHH-HHHHHHHHH
T ss_pred HHHHhHCCCHHHHHHHHH-HHHHHHHHH
Confidence 555667799999999996 687888885
No 80
>1tjo_A Iron-rich DPSA-homolog protein; ferritin, low-iron, metal binding protein; 1.60A {Halobacterium salinarum} SCOP: a.25.1.1 PDB: 1moj_A 1tk6_A 1tko_A 1tkp_A
Probab=69.00 E-value=34 Score=28.80 Aligned_cols=124 Identities=17% Similarity=0.051 Sum_probs=67.1
Q ss_pred hHHHHHHHHH---HhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHH-HHHHHHHHHHHHHHHHHHHhCCC-CCCC-----
Q 022031 78 QSRQAIVHSL---AHTESWAIDLSWDIVARFGKQEAMPREFFTDFV-KVAQDEGRHFTLLAARLEELGSS-YGAL----- 147 (303)
Q Consensus 78 ~~ra~lLHai---AHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl-~VA~DEarHF~Ll~~rL~eLG~~-YGd~----- 147 (303)
.++..++-.+ ---|+.++.-..-.-|=. .+.-..-+..|+ +.+.+|..|+-.+.+|+..||.. .+.+
T Consensus 25 ~~~~~vi~~LN~~La~~~~~~~~~~~~hw~v---~G~~f~~lh~~~ee~~~e~~~haD~laERI~~LGg~P~~~~~~~~~ 101 (182)
T 1tjo_A 25 DRAEQCVDALNADLANVYVLYHQLKKHHWNV---EGAEFRDLHLFLGEAAETAEEVADELAERVQALGGVPHASPETLQA 101 (182)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhe---eCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
Confidence 3454444333 234455554444433322 233333344444 56788889999999999999975 2211
Q ss_pred ----ccchhhHHHHHhhh-hhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhH
Q 022031 148 ----PAHDGLWDSAIATS-KDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHC 214 (303)
Q Consensus 148 ----P~H~gLW~~a~~T~-~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV 214 (303)
+-...=|..+...- .++..--.++-.+-| .++.....||..|.++|+. |+.+|-.|+
T Consensus 102 ~s~i~e~~~~~~~~~e~l~~~l~~e~~~i~~~r~---------~i~~a~e~~D~~T~dll~~-~l~~~Ek~~ 163 (182)
T 1tjo_A 102 EASVDVEDEDVYDIRTSLANDMAIYGDIIEATRE---------HTELAENLGDHATAHMLRE-GLIELEDDA 163 (182)
T ss_dssp HCCSCCCCSSBCCHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHTTCHHHHHHHHH-HHHHHHHHH
T ss_pred hCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH---------HHHHHhHCCCHHHHHHHHH-HHHHHHHHH
Confidence 11111011111111 223333333333333 4566678999999999996 677887885
No 81
>2wlu_A DPS-like peroxide resistance protein; DNA-binding, oxidoreductase; 1.94A {Streptococcus pyogenes} PDB: 2wla_A
Probab=68.60 E-value=28 Score=29.35 Aligned_cols=87 Identities=14% Similarity=0.141 Sum_probs=55.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCC-CCC---------Ccc-chhhH-HHHHhhhhhHHHHHHHhhhhHhhcCCCCCHH
Q 022031 118 DFVKVAQDEGRHFTLLAARLEELGSS-YGA---------LPA-HDGLW-DSAIATSKDLLARLAIEHCVHEARGLDVLPT 185 (303)
Q Consensus 118 Dwl~VA~DEarHF~Ll~~rL~eLG~~-YGd---------~P~-H~gLW-~~a~~T~~dllaRmAvvp~vlEArGLD~~p~ 185 (303)
=+-+.+.+|..|+-.+.+|+..||.. .|. ++- ..|-+ +.-.-...++..--.++..+-|
T Consensus 64 ~~ee~~~e~~~~aD~lAERIl~LGg~P~~t~~~~~~~s~i~e~~~~~~~~~~eml~~~l~~~~~~i~~~r~--------- 134 (175)
T 2wlu_A 64 KMDELLDSLNANLDEVSERLITIGGAPYSTLAEFSKHSKLDEAKGTYDKTVAQHLARLVEVYLYLSSLYQV--------- 134 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCSCCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH---------
Confidence 34467788889999999999999975 331 111 12221 2212222344444445554444
Q ss_pred HHHHHHcCCChHHHHHHHhhcchhhhhhH
Q 022031 186 TISRFRNGGDNETAKLLETVVYPEEITHC 214 (303)
Q Consensus 186 ~i~kl~~~GD~~sa~iL~~iI~~DEI~HV 214 (303)
.++.....||..|+++|.. |+.++-.|+
T Consensus 135 ~i~~ae~~~D~~T~dll~~-il~~~Ek~~ 162 (175)
T 2wlu_A 135 GLDITDEEGDAGTNDLFTA-AKTEAEKTI 162 (175)
T ss_dssp HHHHHHHHTCHHHHHHHHH-HHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHH-HHHHHHHHH
Confidence 3556677899999999996 688888885
No 82
>2fjc_A Antigen TPF1; mini ferritin, iron binding protein, metal transport; 2.50A {Treponema pallidum} SCOP: a.25.1.1
Probab=68.29 E-value=32 Score=28.24 Aligned_cols=128 Identities=11% Similarity=-0.006 Sum_probs=70.0
Q ss_pred CCCHhHHHHHHHHHHh---hHHHHHHHHHHHHHhcCCCCCCChhH-HHhHHHHHHHHHHHHHHHHHHHHHhCCC-CCC--
Q 022031 74 AGSLQSRQAIVHSLAH---TESWAIDLSWDIVARFGKQEAMPREF-FTDFVKVAQDEGRHFTLLAARLEELGSS-YGA-- 146 (303)
Q Consensus 74 ~~t~~~ra~lLHaiAH---IE~~AIdLa~Dav~RF~~~~~lP~~F-y~Dwl~VA~DEarHF~Ll~~rL~eLG~~-YGd-- 146 (303)
+.+..++..++-.+-+ -|+-++.-..-.-|=. .+.-..- ..=+-+.+.+|..|+-.+.+|+..||.. .|.
T Consensus 5 ~~~~~~~~~vi~~Ln~~La~~~~~~~q~~~~hw~v---~G~~f~~lh~~~ee~~~e~~~~aD~lAERI~~LGg~P~~~~~ 81 (156)
T 2fjc_A 5 VPDARAIAAICEQLRQHVADLGVLYIKLHNYHWHI---YGIEFKQVHELLEEYYVSVTEAFDTIAERLLQLGAQAPASMA 81 (156)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE---ESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhe---ECCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHH
Confidence 4455566665555433 3444444443333322 1222222 2334467788889999999999999975 331
Q ss_pred -------Ccc-chhhHHHHHhhhhhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhH
Q 022031 147 -------LPA-HDGLWDSAIATSKDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHC 214 (303)
Q Consensus 147 -------~P~-H~gLW~~a~~T~~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV 214 (303)
++- ..|..+.-.-...++..--.++-.+-| .++.....||..|+++|.. |+.++-.|+
T Consensus 82 ~~~~~s~i~e~~~~~~~~~eml~~~l~~~~~~i~~~r~---------~i~~a~~~~D~~T~dll~~-il~~~Ek~~ 147 (156)
T 2fjc_A 82 EYLALSGIAEETEKEITIVSALARVKRDFEYLSTRFSQ---------TQVLAAESGDAVTDGIITD-ILRTLGKAI 147 (156)
T ss_dssp HHHHHCCSCCCCCCSEEHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHTTCHHHHHHHHH-HHHHHHHHH
T ss_pred HHHhhCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH---------HHHHHhhCCCHHHHHHHHH-HHHHHHHHH
Confidence 110 111111111111233333344444433 4666778999999999996 688888885
No 83
>1vjx_A Putative ferritin-like DIIRON-carboxylate protein; structural genomics, joint center for structural genomics, J protein structure initiative; 2.30A {Thermotoga maritima} SCOP: a.25.1.1
Probab=67.29 E-value=9 Score=31.44 Aligned_cols=127 Identities=10% Similarity=0.051 Sum_probs=72.2
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCC-----CC-CCCccch--h
Q 022031 81 QAIVHSLAHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGS-----SY-GALPAHD--G 152 (303)
Q Consensus 81 a~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~-----~Y-Gd~P~H~--g 152 (303)
-+|-.|| .+|..+++......- -. -.+...=|.+.|.+|.+|..++.+.... +. .| ..++--. +
T Consensus 17 e~L~~Ai-~~E~~~~~~Y~~lA~-~~-----~~~~k~lF~~LA~eE~~H~~~l~~l~~~-~~~~~~~~~l~~~~~~~~f~ 88 (157)
T 1vjx_A 17 DILTVAI-RLEEEGERFYRELSE-HF-----NGEIKKTFLELADQERIHAEIFRKMSDQ-ENWDEVDSYLAGYAFYEVFP 88 (157)
T ss_dssp HHHHHHH-HHHHHHHHHHHHHTT-SC-----CSHHHHHHHHHHHHHHHHHHHHHHHHHH-SCHHHHTCBCCSBCCCCCCC
T ss_pred HHHHHHH-HHHHHHHHHHHHHHH-cC-----CHHHHHHHHHHHHHHHHHHHHHHHhhcc-CcchhHHHHHHhhhhhhccc
Confidence 3344444 578888876655444 21 2355666778999999999999998642 11 01 0111111 1
Q ss_pred hHHHHHh-hhhhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHH
Q 022031 153 LWDSAIA-TSKDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRW 220 (303)
Q Consensus 153 LW~~a~~-T~~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rW 220 (303)
-|..... ...++ ..+.-.-+-.|....+ .+.+-.....|....+++.. |..||-+|+..=.++
T Consensus 89 ~~~~~~~~~~~~~-~~~l~~ai~~E~~a~~---~Y~~~a~~~~d~~~k~l~~~-la~eE~~H~~~l~~~ 152 (157)
T 1vjx_A 89 DTSEILRRKDLTL-KEVLDIAISVEKDSII---LYYELKDGLVNSDAQKTVKK-IIDQEKEHLRKLLEM 152 (157)
T ss_dssp CCTTGGGCSCCCH-HHHHHHHHHHHHHHHH---HHHHHHHHCCSHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred hhhhhhcccccCH-HHHHHHHHHHHHHHHH---HHHHHHHhCCCHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 2322100 00111 1222233345555444 56666667889999999995 799999998743333
No 84
>3kwo_A Putative bacterioferritin; alpha-helix, bacterial ferritin fold, structural genomics, center for structural genomics of infectious diseases; 1.99A {Campylobacter jejuni} SCOP: a.25.1.0
Probab=66.43 E-value=43 Score=27.29 Aligned_cols=88 Identities=11% Similarity=-0.003 Sum_probs=55.7
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHhCCC-CCC---------Ccc-chhhHHHHHhhhhhHHHHHHHhhhhHhhcCCCCCHH
Q 022031 117 TDFVKVAQDEGRHFTLLAARLEELGSS-YGA---------LPA-HDGLWDSAIATSKDLLARLAIEHCVHEARGLDVLPT 185 (303)
Q Consensus 117 ~Dwl~VA~DEarHF~Ll~~rL~eLG~~-YGd---------~P~-H~gLW~~a~~T~~dllaRmAvvp~vlEArGLD~~p~ 185 (303)
.=+-+.+.++..|+-.+.+|+..||.. .|. ++- ..|-++.-.-...++..--.++-.+-|
T Consensus 41 ~~~ee~~~~~~~~~D~iAERI~~LGg~P~~t~~~~~~~s~i~e~~~~~~~~~eml~~~l~~~~~~i~~~r~--------- 111 (152)
T 3kwo_A 41 EYTEKAYEEMAELFDSCAERVLQLGEKAITCQKVLMENAKSPKVAKDCFTPLEVIELIKQDYEYLLAEFKK--------- 111 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCHHHHHHHCCSCCCCCSCBCHHHHHHHHHHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH---------
Confidence 345578899999999999999999984 331 111 112222222222233334444444433
Q ss_pred HHHHHHcCCChHHHHHHHhhcchhhhhhH
Q 022031 186 TISRFRNGGDNETAKLLETVVYPEEITHC 214 (303)
Q Consensus 186 ~i~kl~~~GD~~sa~iL~~iI~~DEI~HV 214 (303)
.++.....||..|+++|.. |+.++=.|+
T Consensus 112 ~i~~a~~~~D~~T~dll~~-~l~~~Ek~~ 139 (152)
T 3kwo_A 112 LNEAAEKESDTTTAAFAQE-NIAKYEKSL 139 (152)
T ss_dssp HHHHHHHTTCHHHHHHHHH-HHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHH-HHHHHHHHH
Confidence 4667778899999999996 577777775
No 85
>4eve_A Neutrophil-activating protein; dodecamer, four-helix bundle, metal transport; 2.10A {Helicobacter pylori} PDB: 4evd_A 3t9j_A 3ta8_A 4evb_A 4evc_A 1ji4_A
Probab=66.39 E-value=41 Score=28.00 Aligned_cols=86 Identities=15% Similarity=0.079 Sum_probs=55.2
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHhCCC-CC------------CCccchhhHHHHHhhhhhHHHHHHHhhhhHhhcCCCCC
Q 022031 117 TDFVKVAQDEGRHFTLLAARLEELGSS-YG------------ALPAHDGLWDSAIATSKDLLARLAIEHCVHEARGLDVL 183 (303)
Q Consensus 117 ~Dwl~VA~DEarHF~Ll~~rL~eLG~~-YG------------d~P~H~gLW~~a~~T~~dllaRmAvvp~vlEArGLD~~ 183 (303)
.=+-+.+.++..|+-.+.+|+..||.. .| +.|. +-++.-.-...++..--.++-.+-|
T Consensus 58 ~~~ee~~~e~~~~~D~lAERI~~LGg~P~~t~~~~~~~s~i~e~~~--~~~~~~eml~~ll~~~~~~i~~~r~------- 128 (164)
T 4eve_A 58 KATEEIYEEFADMFDDLAERIVQLGHHPLVTLSEAIKLTRVKEETK--TSFHSKDIFKEILEDYKHLEKEFKE------- 128 (164)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCCSCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHH-------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHcCCCcCCC--CCCCHHHHHHHHHHHHHHHHHHHHH-------
Confidence 345578899999999999999999983 33 1222 2222211122233334444444433
Q ss_pred HHHHHHHHcCCChHHHHHHHhhcchhhhhhH
Q 022031 184 PTTISRFRNGGDNETAKLLETVVYPEEITHC 214 (303)
Q Consensus 184 p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV 214 (303)
.++.....||..|+++|.. |+.++=.|+
T Consensus 129 --~i~~aee~~D~~T~dll~~-il~~~Ek~~ 156 (164)
T 4eve_A 129 --LSNTAEKEGDKVTVTYADD-QLAKLQKSI 156 (164)
T ss_dssp --HHHHHHHTTCHHHHHHHHH-HHHHHHHHH
T ss_pred --HHHHHHHCCCHHHHHHHHH-HHHHHHHHH
Confidence 4667778899999999996 577776664
No 86
>1zpy_A Hypothetical protein NE0167; structural genomics, MCSG, PSI, protein structure initiative; 2.20A {Nitrosomonas europaea atcc 19718} PDB: 3k6c_A
Probab=66.29 E-value=32 Score=27.12 Aligned_cols=54 Identities=20% Similarity=0.182 Sum_probs=40.9
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHh
Q 022031 81 QAIVHSLAHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEEL 140 (303)
Q Consensus 81 a~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eL 140 (303)
...+=+|. -|+-|||+.-..+-.-. -.+-..=+..+|.||..|+.|+.+.|+.+
T Consensus 21 ~rai~aL~-~EleAI~~Y~q~A~~t~-----D~evk~vl~~iadEEkeH~g~~l~~Lrr~ 74 (95)
T 1zpy_A 21 HRAIISLR-EELEAVDLYNQRVNACK-----DKELKAILAHNRDEEKEHAAMLLEWIRRC 74 (95)
T ss_dssp HHHHHHHH-HHHHHHHHHHHHHHHCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHhCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33444776 89999999977766553 23445556789999999999999998876
No 87
>2c2u_A DPS, DNA-binding stress response protein; DNA-binding protein, iron; 1.1A {Deinococcus radiodurans} PDB: 2c2f_A 2f7n_A
Probab=66.15 E-value=29 Score=30.41 Aligned_cols=112 Identities=11% Similarity=-0.058 Sum_probs=63.8
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCChhHH-HhHHHHHHHHHHHHHHHHHHHHHhCCC-CCC---------Cccch-hhHHHH
Q 022031 90 TESWAIDLSWDIVARFGKQEAMPREFF-TDFVKVAQDEGRHFTLLAARLEELGSS-YGA---------LPAHD-GLWDSA 157 (303)
Q Consensus 90 IE~~AIdLa~Dav~RF~~~~~lP~~Fy-~Dwl~VA~DEarHF~Ll~~rL~eLG~~-YGd---------~P~H~-gLW~~a 157 (303)
-|+-++.-..-.-|=. .+.-...+ .=+-+.+.+|..|+-.+.+|+..||.. .|. ++-.. |..+.-
T Consensus 71 de~~l~~qy~~~HWnv---~G~~F~~LHe~~ee~~~e~~~haD~lAERIl~LGG~P~~t~~~~~~~s~I~e~~~g~~~~~ 147 (207)
T 2c2u_A 71 TTISLYLKFKKYHWDI---RGRFFRDLHLAYDEFIAEIFPSIDEQAERLVALGGSPLAAPADLARYSTVQVPQETVRDAR 147 (207)
T ss_dssp HHHHHHHHHHHHHHHC---CSTTHHHHHHHHHHHHHHHTHHHHHHHHHHHHTTBCCCCSHHHHHHHCSSCCCSSCCCCHH
T ss_pred HHHHHHHHHHHHHHhc---CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHhCCCCCcCCCCCCHH
Confidence 4555555554333322 22322222 233456777789999999999999975 331 21111 111111
Q ss_pred HhhhhhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhH
Q 022031 158 IATSKDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHC 214 (303)
Q Consensus 158 ~~T~~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV 214 (303)
.-...++..--.++-.+-| .|+.....||..|+++|.. |+.+|-.|+
T Consensus 148 emL~~ll~~e~~~i~~~re---------~i~~aee~~D~~T~dLl~~-il~~~Ekhi 194 (207)
T 2c2u_A 148 TQVADLVQDLSRVGKGYRD---------DSQACDEANDPVTADMYNG-YAATIDKIR 194 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHH---------HHHHHHHTTCHHHHHHHHH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH---------HHHHHHHCCCHHHHHHHHH-HHHHHHHHH
Confidence 1112233434444444444 4666788999999999996 688888885
No 88
>2xgw_A Peroxide resistance protein; metal binding protein; 2.10A {Streptococcus pyogenes}
Probab=64.88 E-value=34 Score=29.72 Aligned_cols=87 Identities=14% Similarity=0.141 Sum_probs=55.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCC-CCC---------Ccc-chhhH-HHHHhhhhhHHHHHHHhhhhHhhcCCCCCHH
Q 022031 118 DFVKVAQDEGRHFTLLAARLEELGSS-YGA---------LPA-HDGLW-DSAIATSKDLLARLAIEHCVHEARGLDVLPT 185 (303)
Q Consensus 118 Dwl~VA~DEarHF~Ll~~rL~eLG~~-YGd---------~P~-H~gLW-~~a~~T~~dllaRmAvvp~vlEArGLD~~p~ 185 (303)
=+-+.+.+|..|+-.+.+|+..||.. .|. ++- ..|.+ +.-.-...++..--.++..+-|
T Consensus 80 ~~ee~~~e~~~haD~lAERIl~LGG~P~~t~~~~~~~s~i~e~~~g~~~~~~emL~~ll~~e~~~i~~~re--------- 150 (199)
T 2xgw_A 80 KMDELLDSLNANLDEVSERLITIGGAPYSTLAEFSKHSKLDEAKGTYDKTVAQHLARLVEVYLYLSSLYQV--------- 150 (199)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCSCCCCCCCTTSCHHHHHHHHHHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCcCCCCCCCCHHHHHHHHHHHHHHHHHHHHH---------
Confidence 34467788889999999999999975 331 111 12221 2211222344444445554444
Q ss_pred HHHHHHcCCChHHHHHHHhhcchhhhhhH
Q 022031 186 TISRFRNGGDNETAKLLETVVYPEEITHC 214 (303)
Q Consensus 186 ~i~kl~~~GD~~sa~iL~~iI~~DEI~HV 214 (303)
.++.....||..|+++|.. |+.+|-.|+
T Consensus 151 ~i~~aee~~D~~T~dll~~-il~~~Ekh~ 178 (199)
T 2xgw_A 151 GLDITDEEGDAGTNDLFTA-AKTEAEKTI 178 (199)
T ss_dssp HHHHHHHHTCHHHHHHHHH-HHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHH-HHHHHHHHH
Confidence 4566677899999999996 688888886
No 89
>1h0o_A Ribonucleoside-diphosphate reductase; oxidoreductase, ribonucleotide reductase, dinuclear metal-cluster; 2.2A {Mus musculus} SCOP: a.25.1.2 PDB: 1h0n_A 1w68_A 1w69_A 1xsm_A 2uw2_A 3hf1_A 2vux_A
Probab=63.72 E-value=7.6 Score=37.43 Aligned_cols=99 Identities=13% Similarity=0.044 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCccchhhHHHHH-----------------hhhhhHHHHHHHhhhhHhhcCCCCC
Q 022031 121 KVAQDEGRHFTLLAARLEELGSSYGALPAHDGLWDSAI-----------------ATSKDLLARLAIEHCVHEARGLDVL 183 (303)
Q Consensus 121 ~VA~DEarHF~Ll~~rL~eLG~~YGd~P~H~gLW~~a~-----------------~T~~dllaRmAvvp~vlEArGLD~~ 183 (303)
..+..|+.|-..+..-|..+|.+-.. -+.++++.. ++..+++.++... .++|+-=+=.+
T Consensus 165 ~Q~~~EaiHsesYS~il~tl~~d~~e---~~~if~~~~~~p~l~~Ka~~i~~~~~~~~~~~~~~lva~-~~lEGi~Fys~ 240 (390)
T 1h0o_A 165 FQIAMENIHSEMYSLLIDTYIKDPKE---REYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAF-AAVEGIFFSGS 240 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCHHH---HHHHHTHHHHCHHHHHHHHHHHHHHHCSSSCHHHHHHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHH---HHHHHHHHHhCHHHHHHHHHHHHHHhccchhHHHHHHHH-HHHHHHHHHHH
Confidence 45678999999999999998863111 111222111 1123566666555 45676433112
Q ss_pred HHHHHHHHcCCCh-HHHHHHHhhcchhhhhhHHhhhHHHHHH
Q 022031 184 PTTISRFRNGGDN-ETAKLLETVVYPEEITHCAAGVRWFRYL 224 (303)
Q Consensus 184 p~~i~kl~~~GD~-~sa~iL~~iI~~DEI~HV~~G~rWf~~l 224 (303)
=..+--|.+.|-. -++.+++ -|.+||.-|+.+|..=|+.+
T Consensus 241 F~~~~~l~~rg~MpG~~~~i~-lI~RDE~lH~~f~~~l~~~l 281 (390)
T 1h0o_A 241 FASIFWLKKRGLMPGLTFSNE-LISRDEGLHCDFACLMFKHL 281 (390)
T ss_dssp HHHHHHHHHTTCCHHHHHHHH-HHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHcCCCccHHHHHH-HHHHHHHHHHHHHHHHHHHh
Confidence 1223356666654 5577888 68999999999997766655
No 90
>2fzf_A Hypothetical protein; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI; 2.70A {Pyrococcus furiosus} SCOP: a.25.1.1
Probab=63.31 E-value=61 Score=26.55 Aligned_cols=64 Identities=17% Similarity=0.083 Sum_probs=48.1
Q ss_pred CCCCHhHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhC
Q 022031 73 KAGSLQSRQAIVHSLAHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELG 141 (303)
Q Consensus 73 ~~~t~~~ra~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG 141 (303)
..+...+-..+|-.....|..||+..-.++-... + .+=..=+-+.|.||..|..+|.+.|..+-
T Consensus 99 ~~~~~~~~~~~L~~ai~~E~~a~~~Y~~~a~~~~---d--~~~r~l~~~ia~eE~~H~~~l~~~l~~l~ 162 (175)
T 2fzf_A 99 ELEKVQDIIDLIRWAMKAEEIAAEFYLKLEEMVK---E--EEKKRLMRYLADMERGHYYTLRAEYELLL 162 (175)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTSC---S--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccccCCHHHHHHHHHHHHHHHHHHHHHHHhhCC---C--HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3455556777888888899999999988777663 2 23333366889999999999999888753
No 91
>2oc5_A Hypothetical protein; DUF3066 family protein, structural genomics, joint center FO structural genomics, JCSG; HET: UNL; 1.68A {Prochlorococcus marinus} SCOP: a.25.1.6
Probab=61.19 E-value=38 Score=30.44 Aligned_cols=121 Identities=21% Similarity=0.185 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCCCCCC--------ccchhhHHHHHhhhh
Q 022031 91 ESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSSYGAL--------PAHDGLWDSAIATSK 162 (303)
Q Consensus 91 E~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~YGd~--------P~H~gLW~~a~~T~~ 162 (303)
|.-|-|-..+..-.- .+..+++.+.+.=|.||.+=....=+.||+.- |+ |+|+.+-.++.. .
T Consensus 46 EqeA~dNyi~la~ll-------P~~~dEL~rLakME~rH~kgF~aCGrNL~V~p-Dm~fA~~fF~~LH~nFq~A~~~--g 115 (244)
T 2oc5_A 46 EQEAHDNYIAIGTLL-------PDHVEELKRLAKMEMRHKKGFTACGKNLGVEA-DMDFAREFFAPLRDNFQTALGQ--G 115 (244)
T ss_dssp HHHHHHHHHHHHHHC-------GGGHHHHHHHHHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHHHHHHHHHHHT--T
T ss_pred hHHHHHhHHHHHHHC-------cccHHHHHHHHHHHHHHHhHHHHhccCCcCCC-CcHHHHHHHHHHHHHHHHHHhc--C
Confidence 555555555544433 35688999999999999999998888988864 54 356555444432 5
Q ss_pred hHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHHHHHHH
Q 022031 163 DLLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWFRYLCL 226 (303)
Q Consensus 163 dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf~~lc~ 226 (303)
.+..=+-|-.+..|+=.+- --.-.-.+-|.-+.+|-+- +..||-.|..+|-.|++---+
T Consensus 116 kv~TCLlIQaLiIE~FAIa----AYniYIpVAD~FARkITeg-VVkDEY~HLNfGe~WLk~~f~ 174 (244)
T 2oc5_A 116 KTPTCLLIQALLIEAFAIS----AYHTYIPVSDPFARKITEG-VVKDEYTHLNYGEAWLKANLE 174 (244)
T ss_dssp CHHHHHHHHHTHHHHHHHH----HHHHHGGGSCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred CeeehHHHHHHHHHHHHHH----HHhhccccccHHHHHHHHh-HHhhHHhhcchHHHHHHHHHH
Confidence 6666666767666653221 1123346789988999995 589999999999999986543
No 92
>1jk0_B RNR Y4, ribonucleoside-diphosphate reductase small chain 2; ribonucleotide reductase, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: a.25.1.2 PDB: 1sms_A
Probab=60.26 E-value=28 Score=32.69 Aligned_cols=105 Identities=9% Similarity=-0.100 Sum_probs=67.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCCCccch------hhHHHH---H----hhhhhHHHHHHHhhhhHhhcCCCCCHH
Q 022031 119 FVKVAQDEGRHFTLLAARLEELGSSYGALPAHD------GLWDSA---I----ATSKDLLARLAIEHCVHEARGLDVLPT 185 (303)
Q Consensus 119 wl~VA~DEarHF~Ll~~rL~eLG~~YGd~P~H~------gLW~~a---~----~T~~dllaRmAvvp~vlEArGLD~~p~ 185 (303)
....+..|+.|-..+..-|..+|.+-...-+++ .|-+.+ . ++..+++.++... .++|+-=+=.+=.
T Consensus 117 ~~~q~~~E~iHs~sYs~il~tl~~~~~e~~~f~~~~~~p~l~~K~~~i~~~~~~~~~~~~~~lva~-~~lEgi~FysgF~ 195 (345)
T 1jk0_B 117 YGFQIMMENIYSEVYSMMVDAFFKDPKNIPLFKEIANLPEVKHKAAFIERWISNDDSLYAERLVAF-AAKEGIFQAGNYA 195 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCSCTTSCSGGGGCSCHHHHHHHHHHHHTTSSSSCCHHHHHHHH-HHHHHTTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHhCCcHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 346789999999999999999985433311111 121111 0 1112366666655 5778765544444
Q ss_pred HHHHHHcCCCh-HHHHHHHhhcchhhhhhHHhhhHHHHHHH
Q 022031 186 TISRFRNGGDN-ETAKLLETVVYPEEITHCAAGVRWFRYLC 225 (303)
Q Consensus 186 ~i~kl~~~GD~-~sa~iL~~iI~~DEI~HV~~G~rWf~~lc 225 (303)
++--|.+.|-. .++.+++ -|.+||.-|+.+|..=|+.+.
T Consensus 196 ~~~~l~~~g~m~g~~~~i~-~I~RDE~lH~~f~~~l~~~l~ 235 (345)
T 1jk0_B 196 SMFWLTDKKIMPGLAMANR-NICRDRGAYTDFSCLLFAHLR 235 (345)
T ss_dssp HHHHHTSSSSCHHHHHHHH-HHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHcCCchhHHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 45567777765 4577888 689999999999977666654
No 93
>1jk0_A RNR Y2, ribonucleoside-diphosphate reductase small chain 1; ribonucleotide reductase, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: a.25.1.2 PDB: 1smq_A
Probab=58.26 E-value=18 Score=35.17 Aligned_cols=98 Identities=13% Similarity=-0.035 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCccchhhHHHH----------Hhh-------hhhHHHHHHHhhhhHhhcCCCCC
Q 022031 121 KVAQDEGRHFTLLAARLEELGSSYGALPAHDGLWDSA----------IAT-------SKDLLARLAIEHCVHEARGLDVL 183 (303)
Q Consensus 121 ~VA~DEarHF~Ll~~rL~eLG~~YGd~P~H~gLW~~a----------~~T-------~~dllaRmAvvp~vlEArGLD~~ 183 (303)
..+..|+.|-..|..-|..++.+-.. -+.++.+. .-. ..+++.++... .++|+-=+ .+
T Consensus 191 ~Q~~~EaIHsesYS~il~tl~~d~~e---~~~iF~~i~~~p~L~~Ka~~i~~~~~~~~~~~~~~lva~-~~lEGI~f-sg 265 (419)
T 1jk0_A 191 FQIMIENIHSETYSLLIDTYIKDPKE---SEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAF-ASIEGVFF-SG 265 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCHHH---HHHHHHHHTTCHHHHHHHHHHHHHTTSSSCCHHHHHHHH-HHHHHTTT-HH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHH---HHHHHHHHhhCHHHHHHHHHHHHHHhccchhHHHHHHHH-HHHHHHHH-HH
Confidence 66788999999999999998853110 01222221 111 12356566554 67787654 32
Q ss_pred HHH-HHHHHcCCCh-HHHHHHHhhcchhhhhhHHhhhHHHHHH
Q 022031 184 PTT-ISRFRNGGDN-ETAKLLETVVYPEEITHCAAGVRWFRYL 224 (303)
Q Consensus 184 p~~-i~kl~~~GD~-~sa~iL~~iI~~DEI~HV~~G~rWf~~l 224 (303)
-+. +--|.+.|-. -++.+++ -|.+||.-|+.+|..=|+.+
T Consensus 266 ~Fa~~~~l~~rg~MpG~~~~i~-lI~RDE~lH~~f~~~l~~~l 307 (419)
T 1jk0_A 266 SFASIFWLKKRGMMPGLTFSNE-LICRDEGLHTDFACLLFAHL 307 (419)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHH-HHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCccHHHHHH-HHHHHHHHHHHHHHHHHHHh
Confidence 333 4567777754 5577888 68999999999997666654
No 94
>3olj_A Ribonucleoside-diphosphate reductase subunit M2; metal-binding, HRRM2, oxidoreductase; 2.10A {Homo sapiens} PDB: 4djn_A
Probab=56.21 E-value=23 Score=32.36 Aligned_cols=136 Identities=18% Similarity=0.137 Sum_probs=76.2
Q ss_pred hHHHHHHHHHHhhHHHHHHHHH--HHHHhcCCCCCCC--hhHHHhHHHHHHHHHHHHHHHHHHHHHhCCCCCCCccchhh
Q 022031 78 QSRQAIVHSLAHTESWAIDLSW--DIVARFGKQEAMP--REFFTDFVKVAQDEGRHFTLLAARLEELGSSYGALPAHDGL 153 (303)
Q Consensus 78 ~~ra~lLHaiAHIE~~AIdLa~--Dav~RF~~~~~lP--~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~YGd~P~H~gL 153 (303)
.-|-.+.|.++= |.+.|-.. +.+-+|...-..| ..||. ..+..|+.|-..+..-+..+|.+-.. -+.+
T Consensus 58 ~Er~~~~~~l~~--~~~~D~iv~~~l~~~~~~~v~~pE~~~~~~---~q~~~E~iHs~sYs~il~tl~~d~~e---~~~~ 129 (286)
T 3olj_A 58 EERYFISHVLAF--FAASDGIVNENLVERFSQEVQITEARCFYG---FQIAMENIHSEMYSLLIDTYIKDPKE---REFL 129 (286)
T ss_dssp HHHHHHHHHHHH--HHHHHHHHHHHHHHTHHHHCCCHHHHHHHH---HHHHHHHHHHHHHHHHHHHHCCCHHH---HHHH
T ss_pred HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHCCCHHHHHHHH---HHHHHHHHHHHHHHHHHHHHcCCHHH---HHHH
Confidence 445667776653 22333221 3334553212234 23433 45899999999999999999864221 1122
Q ss_pred HHHHH-----------------hhhhhHHHHHHHhhhhHhhcCCCCCHHH-HHHHHcCCC-hHHHHHHHhhcchhhhhhH
Q 022031 154 WDSAI-----------------ATSKDLLARLAIEHCVHEARGLDVLPTT-ISRFRNGGD-NETAKLLETVVYPEEITHC 214 (303)
Q Consensus 154 W~~a~-----------------~T~~dllaRmAvvp~vlEArGLD~~p~~-i~kl~~~GD-~~sa~iL~~iI~~DEI~HV 214 (303)
+++.. +...++..|+...- ++|+-=+ .+-+. +--|.+.|- ..++.+++ -|.+||.-|+
T Consensus 130 f~~~~~~p~l~~K~~~~~~~~~~~~~~~~~~lva~~-~lEgi~f-~~~F~~~~~l~~~g~m~g~~~~i~-~I~RDE~~H~ 206 (286)
T 3olj_A 130 FNAIETMPCVKKKADWALRWIGDKEATYGERVVAFA-AVEGIFF-SGSFASIFWLKKRGLMPGLTFSNE-LISRDEGLHC 206 (286)
T ss_dssp HTHHHHCGGGHHHHHHHHHHHHCSSSCHHHHHHHHH-HHHHTTT-HHHHHHHHHHHHTTCCHHHHHHHH-HHHHHHHHHH
T ss_pred HHHHHhCHHHHHHHHHHHHHHhCChhHHHHHHHHHH-HHHHHHH-HHHHHHHHHHHHCCCchhHHHHHH-HHHHHHHHHH
Confidence 22211 11123444544443 6776433 22222 334666776 45678888 6899999999
Q ss_pred HhhhHHHHHH
Q 022031 215 AAGVRWFRYL 224 (303)
Q Consensus 215 ~~G~rWf~~l 224 (303)
.+|..=|+.+
T Consensus 207 ~~~~~l~~~l 216 (286)
T 3olj_A 207 DFACLMFKHL 216 (286)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHHHH
Confidence 9997666555
No 95
>2clb_A DPS-like protein; DI-iron carboxylate, hypothetical protein, bacterioferritin, hydrogen peroxide, metal binding protein, archaea; 2.4A {Sulfolobus solfataricus}
Probab=54.76 E-value=97 Score=26.14 Aligned_cols=129 Identities=21% Similarity=0.171 Sum_probs=77.2
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCC-hhHHHhHHHHHHHHHHHHHHHHHHHHHhCCC-CC---------CCc
Q 022031 80 RQAIVHSLAHTESWAIDLSWDIVARFGKQEAMP-REFFTDFVKVAQDEGRHFTLLAARLEELGSS-YG---------ALP 148 (303)
Q Consensus 80 ra~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP-~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~-YG---------d~P 148 (303)
-+.+|=..-.-|+.++....-.-|=. .+.- ..+..=+-+.+.+|..|+-.+.+|+..||.. .+ .++
T Consensus 26 v~~~LN~~La~e~~~~~~y~~~hw~v---~G~~f~~lh~~f~~~~~ee~~haD~iaERI~~LGg~p~~~~~~~~~~s~I~ 102 (188)
T 2clb_A 26 LVDKLVKATAAEFTTYYYYTILRMHL---TGMEGEGLKEIAEDARLEDRLHFELMTQRIYELGGGLPRDIRQLADISACS 102 (188)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTC---CHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSSHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHhccCC
Confidence 35556555566788888877766633 1111 1233334467888899999999999999986 32 344
Q ss_pred -c-chhhHHHHHhhhhhHH-HHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHHHHHH
Q 022031 149 -A-HDGLWDSAIATSKDLL-ARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWFRYLC 225 (303)
Q Consensus 149 -~-H~gLW~~a~~T~~dll-aRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf~~lc 225 (303)
. ..+=|..+...-..++ .--.++-.+-+ +++..... |..|.++|+. |+.++..|. .||.-+.
T Consensus 103 ~e~~~~~~~~~~e~l~~~l~~e~~v~~~~~~---------~i~~A~e~-D~~T~dlL~~-~l~e~ee~~----~~l~~~L 167 (188)
T 2clb_A 103 DAYLPENWKDPKEILKVLLEAEQCAIRTWKE---------VCDMTYGK-DPRTYDLAQR-ILQEEIEHE----AWFLELL 167 (188)
T ss_dssp CCCCCTTTTSHHHHHHHHHHHHHHHHHHHHH---------HHHHHTTT-CHHHHHHHHH-HHHHHHHHH----HHHHHHH
T ss_pred ccCCCCCCCCHHHHHHHHHHHHHHHHHHHHH---------HHHHHHhc-CHHHHHHHHH-HHHHHHHHH----HHHHHHh
Confidence 3 2221322222222222 22233333322 34455567 9999999996 688888887 5777664
Q ss_pred H
Q 022031 226 L 226 (303)
Q Consensus 226 ~ 226 (303)
.
T Consensus 168 ~ 168 (188)
T 2clb_A 168 Y 168 (188)
T ss_dssp S
T ss_pred c
Confidence 3
No 96
>2z90_A Starvation-inducible DNA-binding protein or FINE tangled PILI major subunit; quarternary assembly, ferroxidation; 2.40A {Mycobacterium smegmatis str}
Probab=52.37 E-value=71 Score=26.29 Aligned_cols=85 Identities=15% Similarity=0.057 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCC-CCC---------Cccch-hhHHHHHhhhhhHHHHHHHhhhhHhhcCCCCCHHHH
Q 022031 119 FVKVAQDEGRHFTLLAARLEELGSS-YGA---------LPAHD-GLWDSAIATSKDLLARLAIEHCVHEARGLDVLPTTI 187 (303)
Q Consensus 119 wl~VA~DEarHF~Ll~~rL~eLG~~-YGd---------~P~H~-gLW~~a~~T~~dllaRmAvvp~vlEArGLD~~p~~i 187 (303)
+-+.+.+|..|+-.+.+|+..||.. .|. ++-.. |.++.-.-...++..--.++..+-| .+
T Consensus 56 ~ee~~~e~~~~aD~lAERIl~LGg~P~~t~~~~~~~s~i~e~~~~~~~~~eml~~~l~~~~~~i~~~r~---------~i 126 (161)
T 2z90_A 56 LDELVDFAREGSDTIAERMRALDAVPDGRSDTVAATTTLPEFPAFERSTADVVDLITTRINATVDTIRR---------VH 126 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCCSCCCCSSCEEHHHHHHHHHHHHHHHHHHHHH---------HH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH---------HH
Confidence 3467788889999999999999975 331 22111 1111111122344444445554444 35
Q ss_pred HHHHcCCChHHHHHHHhhcchhhhhhH
Q 022031 188 SRFRNGGDNETAKLLETVVYPEEITHC 214 (303)
Q Consensus 188 ~kl~~~GD~~sa~iL~~iI~~DEI~HV 214 (303)
+..... |..|+++|.. |+.++-.|+
T Consensus 127 ~~a~~~-D~~T~dll~~-il~~~Ek~~ 151 (161)
T 2z90_A 127 DAVDAE-DPSTADLLHG-LIDGLEKQA 151 (161)
T ss_dssp HHHHHH-CHHHHHHHHH-HHHHHHHHH
T ss_pred HHhcCC-CHHHHHHHHH-HHHHHHHHH
Confidence 556677 9999999996 688888875
No 97
>1vjx_A Putative ferritin-like DIIRON-carboxylate protein; structural genomics, joint center for structural genomics, J protein structure initiative; 2.30A {Thermotoga maritima} SCOP: a.25.1.1
Probab=50.99 E-value=51 Score=26.75 Aligned_cols=55 Identities=15% Similarity=0.146 Sum_probs=40.4
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHh
Q 022031 81 QAIVHSLAHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEEL 140 (303)
Q Consensus 81 a~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eL 140 (303)
..+|-..-..|..||+..-.++-++++ .+-..=+.+.|.||..|..+|.+.|.+.
T Consensus 102 ~~~l~~ai~~E~~a~~~Y~~~a~~~~d-----~~~k~l~~~la~eE~~H~~~l~~~~~~~ 156 (157)
T 1vjx_A 102 KEVLDIAISVEKDSIILYYELKDGLVN-----SDAQKTVKKIIDQEKEHLRKLLEMKRES 156 (157)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCS-----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 444444556899999999988888741 1222225578999999999999988764
No 98
>4a58_A Ribonucleoside-diphosphate reductase small chain; oxidoreductase, epstein-BARR virus, R2 subunit; 1.68A {Human herpesvirus 4} PDB: 4a5c_A 4a5d_A 4a5e_A 4a5f_A 4a5h_A 4a5i_A 4a5j_A
Probab=49.37 E-value=84 Score=29.17 Aligned_cols=138 Identities=12% Similarity=0.010 Sum_probs=78.5
Q ss_pred CHhHHHHHHHHHHhhHHHHHHHH----HHHHHhcCCCCCCC--hhHHHhHHHHHHHHHHHHHHHHHHHHHhCC-CCCCCc
Q 022031 76 SLQSRQAIVHSLAHTESWAIDLS----WDIVARFGKQEAMP--REFFTDFVKVAQDEGRHFTLLAARLEELGS-SYGALP 148 (303)
Q Consensus 76 t~~~ra~lLHaiAHIE~~AIdLa----~Dav~RF~~~~~lP--~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~-~YGd~P 148 (303)
+..-|-.+.|.++= |.+.|-. +..++.. -.-| ..||. ..+..|+.|-..+..-+..++. +-+.
T Consensus 65 t~~Er~~~~~vl~~--~~~~D~iv~~nl~~l~~~---i~~pE~~~~l~---~q~~~E~iHs~sYs~il~tl~~~d~~e-- 134 (324)
T 4a58_A 65 NERDLEFYKFLFTF--LAMAEKLVNFNIDELVTS---FESHDIDHYYT---EQKAMENVHGETYANILNMLFDGDRAA-- 134 (324)
T ss_dssp CHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHTT---CCCHHHHHHHH---HHHHHHHHHHHHHHHHHHHHTTTCHHH--
T ss_pred CHHHHHHHHHHHHH--HHHhHHHHHhhHHHHHHH---CCcHHHHHHHH---HHHHHHHHHHHHHHHHHHHhcCCCHHH--
Confidence 34457777777764 2222221 1123322 1234 33444 5689999999999999999974 1110
Q ss_pred cchhhHHHHHhh----------------hhhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCCh-HHHHHHHhhcchhhh
Q 022031 149 AHDGLWDSAIAT----------------SKDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDN-ETAKLLETVVYPEEI 211 (303)
Q Consensus 149 ~H~gLW~~a~~T----------------~~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~-~sa~iL~~iI~~DEI 211 (303)
-+.++++.... ..++..++..- .++|+-=+=.+=.++--|.+.|-. .++.+++ -|.+||.
T Consensus 135 -~~~~f~~~~~~p~l~~K~~~i~~~~~~~~~~~~~lva~-~~lEgi~FysgF~~~~~l~~~g~m~g~~~~i~-~I~RDE~ 211 (324)
T 4a58_A 135 -MNAYAEAIMTDEALQAKISWLRDKVAAAVTLPEKILVF-LLIEGIFFISSFYSIALLRVRGLMPGICLANN-YISRDEL 211 (324)
T ss_dssp -HHHHHHHHHTCGGGHHHHHCCCCCHHHCSSHHHHHHHH-HHHHHTTTHHHHHHHHHHHHHTCCHHHHHHHH-HHHHHHH
T ss_pred -HHHHHHHHHhCHHHHHHHHHHHHHHhCchhHHHHHHHH-HHHHHHHHHHHHHHHHHHHhCCCchhHHHHHH-HHHHHHH
Confidence 11233332211 12333344332 455654443333334455566654 4577888 6899999
Q ss_pred hhHHhhhHHHHHHHH
Q 022031 212 THCAAGVRWFRYLCL 226 (303)
Q Consensus 212 ~HV~~G~rWf~~lc~ 226 (303)
-|+.+|..=|+.+.+
T Consensus 212 lH~~f~~~l~~~l~~ 226 (324)
T 4a58_A 212 LHTRAASLLYNSMTA 226 (324)
T ss_dssp HHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999988887754
No 99
>2pyb_A NAPA, neutrophil activating protein; ferritin, DPS, four-helix bundle, metal transport; 2.60A {Borrelia burgdorferi}
Probab=47.43 E-value=13 Score=30.44 Aligned_cols=86 Identities=13% Similarity=0.054 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCC-CC---CC------c-cchhhH-HHHHhhhhhHHHHHHHhhhhHhhcCCCCCHHH
Q 022031 119 FVKVAQDEGRHFTLLAARLEELGSS-YG---AL------P-AHDGLW-DSAIATSKDLLARLAIEHCVHEARGLDVLPTT 186 (303)
Q Consensus 119 wl~VA~DEarHF~Ll~~rL~eLG~~-YG---d~------P-~H~gLW-~~a~~T~~dllaRmAvvp~vlEArGLD~~p~~ 186 (303)
+-+.+.+|..|+-.+.+|+..||.. .| ++ + ...|-+ +.-.-...++..--.++..+-| .
T Consensus 43 ~ee~~~e~~~~aD~lAERI~~Lgg~P~~~~~~~~~~s~l~e~~~~~~~~~~eml~~~l~~~~~~i~~~r~---------~ 113 (151)
T 2pyb_A 43 TQKLYEYIEKIIDIVAERSRMLGYDSEFRYSEFMKKSFIKELDIESTSNFLPSMESIVCSLTEILKNIFG---------M 113 (151)
T ss_dssp HHHHHTTTHHHHHHHHHHHHHHTCCCCCCSTTTTTTCSSCCCCSCSSSCCCSSCCTTSTTHHHHHHHHHH---------H
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH---------H
Confidence 3456777889999999999999975 33 21 1 111211 1111111233333334443333 3
Q ss_pred HHHHHcCCChHHHHHHHhhcchhhhhhH
Q 022031 187 ISRFRNGGDNETAKLLETVVYPEEITHC 214 (303)
Q Consensus 187 i~kl~~~GD~~sa~iL~~iI~~DEI~HV 214 (303)
++.....||..|+++|.. |+.++-.|+
T Consensus 114 i~~a~~~~D~~T~dll~~-il~~~Ek~~ 140 (151)
T 2pyb_A 114 RKLIDTAGDYGTANIMDD-IMSDLEKHL 140 (151)
T ss_dssp HHHHHHHTCHHHHHHHHH-HHHHHHHHH
T ss_pred HHHHhhCCCHHHHHHHHH-HHHHHHHHH
Confidence 555677899999999996 678888885
No 100
>2c2j_A DNA-binding stress response protein; DNA-binding protein, DPS; 2.05A {Deinococcus radiodurans} PDB: 2c6r_A
Probab=46.74 E-value=83 Score=27.59 Aligned_cols=86 Identities=20% Similarity=0.149 Sum_probs=52.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCC-CCC---------Ccc-chhhHHHHHhhhhhHHHHHHHhhhhHhhcCCCCCHHH
Q 022031 118 DFVKVAQDEGRHFTLLAARLEELGSS-YGA---------LPA-HDGLWDSAIATSKDLLARLAIEHCVHEARGLDVLPTT 186 (303)
Q Consensus 118 Dwl~VA~DEarHF~Ll~~rL~eLG~~-YGd---------~P~-H~gLW~~a~~T~~dllaRmAvvp~vlEArGLD~~p~~ 186 (303)
=+-+.+.+|..|+-.+.+|+..||.. .|. ++- ..|..+.-.-...++..--.++-.+-| .
T Consensus 84 ~fee~~~e~~~haD~lAERIl~LGG~P~~t~~~~~~~s~i~e~~~g~~~~~emL~~ll~~e~~~i~~~re---------~ 154 (211)
T 2c2j_A 84 LLQDHYEGISKFADDVAERQLSVGASSDGRAITIVAASRLPEIPGGFLDDAQVIQFFTYQYETVGQRIHQ---------R 154 (211)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHTCCSCCCCCSCEEHHHHHHHHHHHHHHHHHHHHH---------H
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHhCCCcccCCCCCCHHHHHHHHHHHHHHHHHHHHH---------H
Confidence 34467788889999999999999975 332 111 111111111112244444444454444 3
Q ss_pred HHHHHcCCChHHHHHHHhhcchhhhhhH
Q 022031 187 ISRFRNGGDNETAKLLETVVYPEEITHC 214 (303)
Q Consensus 187 i~kl~~~GD~~sa~iL~~iI~~DEI~HV 214 (303)
++..... |..|+++|.. |+.+|-.|+
T Consensus 155 i~~aee~-D~~T~dLl~~-il~~~Ekhi 180 (211)
T 2c2j_A 155 VGDVEKV-DPTTANLLQE-VEHIIEKYQ 180 (211)
T ss_dssp HHHHTTT-CHHHHHHHHH-HHHHHHHHH
T ss_pred HHHHhcc-CHHHHHHHHH-HHHHHHHHH
Confidence 5556677 9999999996 688888885
No 101
>3qhb_A Symerythrin, ORF180; four-helix bundle, carboxylate bridged-DIIRON, ferritin-like superfamily, metal transport; 1.20A {Cyanophora paradoxa} PDB: 3qhc_A 3sid_A
Probab=46.33 E-value=32 Score=29.80 Aligned_cols=121 Identities=22% Similarity=0.213 Sum_probs=75.3
Q ss_pred HHHHHHHHhhHHHH-HH--HHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCCCC------------
Q 022031 81 QAIVHSLAHTESWA-ID--LSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSSYG------------ 145 (303)
Q Consensus 81 a~lLHaiAHIE~~A-Id--La~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~YG------------ 145 (303)
...|-+-++-|..+ .+ +.+--++|- .+.| +-=.=|-.+|..|..|-..+.+.|..++...+
T Consensus 26 ~eNL~~A~~GE~~E~~~~Y~~fA~~A~~---EG~~-~IA~~F~~~A~~E~~HA~r~~kll~~l~~~~~~~~~~~~~~v~~ 101 (179)
T 3qhb_A 26 DANAASSIEVEMYECDCMYPTFAEIARR---SGQP-EIGAMFDAIAKEEGMHAQLLTKLYSELEVKDSAETLEAKRLVST 101 (179)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHH---TTCH-HHHHHHHHHHHHHHHHHHHHHHHSTTCCCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHH---cChH-HHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccc
Confidence 34455556667777 33 333334444 2333 22333558999999999999999987665542
Q ss_pred -CCccchhhHHHHHhhhhh----HHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHH
Q 022031 146 -ALPAHDGLWDSAIATSKD----LLARLAIEHCVHEARGLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCA 215 (303)
Q Consensus 146 -d~P~H~gLW~~a~~T~~d----llaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~ 215 (303)
+.|+- . ...|... |...++ -=..|. -+.=|.+++.-+..|+.+.+..++ -|..+|-.|..
T Consensus 102 ~~~p~~--~---~~~T~eN~~~~L~~A~~--GE~~E~--~~mYp~fA~~A~eEG~~eiA~~F~-~ia~~Ek~H~~ 166 (179)
T 3qhb_A 102 IESQID--A---VASDSRGLRRALETALE--VETIES--QKTYPAFAKLAAEQGNMEVATAFE-AIVKSETKHAN 166 (179)
T ss_dssp HHHTHH--H---HHHSHHHHHHHHHHHHH--HHHHHH--HTHHHHHHHHHHHTTCHHHHHHHH-HHHHHHHHHHH
T ss_pred cccccc--c---cCcHHHHHHHHHHHHHH--hhHHHH--HHHHHHHHHHHHHCCCHHHHHHHH-HHHHHHHHHHH
Confidence 12321 1 1234434 433332 222332 245689999999999999999999 58999999974
No 102
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}
Probab=44.99 E-value=88 Score=29.66 Aligned_cols=100 Identities=17% Similarity=0.229 Sum_probs=57.8
Q ss_pred HHHHHhcCCCCCC-ChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCCCCCCccchh---hHHHHHhhhhhH-HHHHHHhhh
Q 022031 99 WDIVARFGKQEAM-PREFFTDFVKVAQDEGRHFTLLAARLEELGSSYGALPAHDG---LWDSAIATSKDL-LARLAIEHC 173 (303)
Q Consensus 99 ~Dav~RF~~~~~l-P~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~YGd~P~H~g---LW~~a~~T~~dl-laRmAvvp~ 173 (303)
.+++-.|.. ++ -.....=+-+.+.++.+|..+|.+||..||-+--.-+.-.| =|++....+++. +-|-|+
T Consensus 226 ~~a~e~~a~--~~~d~~~~~~~~~i~~~~~~h~~~l~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~~~~~~l~~al--- 300 (365)
T 3fse_A 226 LEALEKYTE--KESDVEAKALFQEMITNKQRHIEYLETYLTRLGEKPSLSANIANQYAKVKTALTGSDDIYQIRSAL--- 300 (365)
T ss_dssp HHHHHHHHH--HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGSCC---------------CHHHHHHHHH---
T ss_pred HHHHHHHHH--hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCcCcchhHHHHHHHHHhcCCChHHHHHHHh---
Confidence 677777863 33 34555566678899999999999999998875332222222 234444333443 234443
Q ss_pred hHhhcCCCCCHHHHHHHH-cCCChHHHHHHHhhcch
Q 022031 174 VHEARGLDVLPTTISRFR-NGGDNETAKLLETVVYP 208 (303)
Q Consensus 174 vlEArGLD~~p~~i~kl~-~~GD~~sa~iL~~iI~~ 208 (303)
..|..|+- ....+. ..=|..+.+||++ |+.
T Consensus 301 ~~~~~gi~----~~~~l~~~~~dp~~~~i~~~-i~~ 331 (365)
T 3fse_A 301 GDIQTGIG----DIGNLCAMYTDPIATAIFKE-IYK 331 (365)
T ss_dssp HHHHHHHH----HHHHHTTTCSCHHHHHHHHH-HHH
T ss_pred cchhhhHH----HHHHHHHhcCCHHHHHHHHH-HHH
Confidence 34566653 344443 4569999999996 565
No 103
>2yw6_A DNA protection during starvation protein; DNA-binding protein, quarternary assembly, ferroxidation, oxidoreductase; HET: DNA; 2.53A {Mycobacterium smegmatis} SCOP: a.25.1.1 PDB: 1vei_A 1vel_A 1veq_A 1uvh_A* 2yw7_A
Probab=41.85 E-value=1.2e+02 Score=25.58 Aligned_cols=85 Identities=14% Similarity=-0.025 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCC-CCC---------Ccc-chhhHHHHHhhhhhHHHHHHHhhhhHhhcCCCCCHHHH
Q 022031 119 FVKVAQDEGRHFTLLAARLEELGSS-YGA---------LPA-HDGLWDSAIATSKDLLARLAIEHCVHEARGLDVLPTTI 187 (303)
Q Consensus 119 wl~VA~DEarHF~Ll~~rL~eLG~~-YGd---------~P~-H~gLW~~a~~T~~dllaRmAvvp~vlEArGLD~~p~~i 187 (303)
+-+.+.+|..|+-.+.+|+..||.. .|. ++- ..|..+.-.--..++..--.++..+-| .+
T Consensus 54 ~ee~~~e~~~haD~lAERIl~LGg~P~~t~~~~~~~s~i~e~~~~~~~~~eml~~~l~~~~~~i~~~r~---------~i 124 (183)
T 2yw6_A 54 IDPQVELVRGYADEVAERIATLGKSPKGTPGAIIKDRTWDDYSVERDTVQAHLAALDLVYNGVIEDTRK---------SI 124 (183)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCSCCCCCCSEEHHHHHHHHHHHHHHHHHHHHH---------HH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHCCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHH---------HH
Confidence 3466778889999999999999975 332 111 111111111111234444444444433 45
Q ss_pred HHHHcCCChHHHHHHHhhcchhhhhhH
Q 022031 188 SRFRNGGDNETAKLLETVVYPEEITHC 214 (303)
Q Consensus 188 ~kl~~~GD~~sa~iL~~iI~~DEI~HV 214 (303)
+..... |..|+++|.. |+.+|-.|+
T Consensus 125 ~~ae~~-D~~T~dll~~-il~~~Ek~~ 149 (183)
T 2yw6_A 125 EKLEDL-DLVSQDLLIA-HAGELEKFQ 149 (183)
T ss_dssp HHHTTT-CHHHHHHHHH-HHHHHHHHH
T ss_pred HHHhcc-CHHHHHHHHH-HHHHHHHHH
Confidence 566677 9999999996 688888886
No 104
>2e0z_A Virus-like particle; bacteriophage, HK97; 3.60A {Pyrococcus furiosus}
Probab=39.36 E-value=6.3 Score=37.60 Aligned_cols=72 Identities=18% Similarity=0.120 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCCHhHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhC
Q 022031 64 SPSLMPKLGKAGSLQSRQAIVHSLAHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELG 141 (303)
Q Consensus 64 ~P~~~p~r~~~~t~~~ra~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG 141 (303)
.|-.+++-++++..+-.-++-++| ..|+.||+.....+-.- =-.+-..=+...|.||.+|+.++.+.|..++
T Consensus 5 ~p~~~~~~~~~~~~el~~air~ai-~~E~eAi~~Y~q~A~~~-----~d~~~K~vl~~ia~EEk~H~~~f~~ll~~l~ 76 (345)
T 2e0z_A 5 NPTLINRDKPYTKEELMEILRLAI-IAELDAINLYEQMARYS-----EDENVRKILLDVAREEKAHVGEFMALLLNLD 76 (345)
T ss_dssp ------------------------------------------------------------------------------
T ss_pred CCCcCcccCCCChHHHHHHHHHHH-HHHHHHHHHHHHHHHhC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
No 105
>4dr0_A Ribonucleoside-diphosphate reductase subunit beta; ribonucleotide reductase, manganese, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=37.34 E-value=1.2e+02 Score=28.59 Aligned_cols=100 Identities=11% Similarity=-0.002 Sum_probs=63.3
Q ss_pred HHHHHHH-HHHHHHHHHHHHhCCCCCCCccchhhHHHHHhhhhhHHHHHHHhhh---------------------hHhhc
Q 022031 121 KVAQDEG-RHFTLLAARLEELGSSYGALPAHDGLWDSAIATSKDLLARLAIEHC---------------------VHEAR 178 (303)
Q Consensus 121 ~VA~DEa-rHF~Ll~~rL~eLG~~YGd~P~H~gLW~~a~~T~~dllaRmAvvp~---------------------vlEAr 178 (303)
..+..|+ .|-..+..-|..+|.. +--+.++++.. +...+..|...+-. .+|+-
T Consensus 113 ~q~~~E~aiHs~sYs~il~tl~~~----~e~~~~f~~~~-~~p~l~~Ka~~i~~~y~~~~~~~~~~~~~~lva~~~lEGi 187 (350)
T 4dr0_A 113 FMAMMENAVHAKSYSNIFMTLAPT----ETINEVFEWVK-QNKYLQKKAQMIVGLYKAIQKDDEISLFKAMVASVYLESF 187 (350)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHSCH----HHHHHHHHHHH-HCHHHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCc----hhHHHHHHHHh-cCHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHH
Confidence 4467788 9999999999999732 22235555433 23445554444443 34443
Q ss_pred CCCCCHHHHHHHHcCCCh-HHHHHHHhhcchhhhhhHHhhhHHHHHHHH
Q 022031 179 GLDVLPTTISRFRNGGDN-ETAKLLETVVYPEEITHCAAGVRWFRYLCL 226 (303)
Q Consensus 179 GLD~~p~~i~kl~~~GD~-~sa~iL~~iI~~DEI~HV~~G~rWf~~lc~ 226 (303)
=+=.+=.++--|.+.|-. .++.+++ -|.+||.-|+.+|..=|+.+.+
T Consensus 188 ~FysgF~~~~~l~~~g~m~G~~~~i~-~I~RDE~lH~~f~~~l~~~l~~ 235 (350)
T 4dr0_A 188 LFYSGFYYPLYFYGQGKLMQSGEIIN-LILRDEAIHGVYVGLLAQEIYN 235 (350)
T ss_dssp TTHHHHHHHHHHHTTTCSHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCchhHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333445666754 5577888 6899999999998777777754
No 106
>2oh3_A Rubrerythrin, COG1633: uncharacterized conserved protein; ZP_00055496.1, COG1633: uncharacterized conSer protein; HET: MSE PGE; 2.00A {Magnetospirillum magnetotacticum} SCOP: a.25.1.8
Probab=33.90 E-value=1.9e+02 Score=23.41 Aligned_cols=59 Identities=14% Similarity=0.068 Sum_probs=43.1
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCC
Q 022031 79 SRQAIVHSLAHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGS 142 (303)
Q Consensus 79 ~ra~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~ 142 (303)
+-..+|-..-.+|..|++..-.+.-+..+ ..-..=+.+.|.||..|..+|.+.+..+..
T Consensus 93 ~~~~~l~~A~~~E~~a~~fY~~~a~~~~d-----~~~k~~~~~la~eE~~H~~~l~~~~~~~~~ 151 (167)
T 2oh3_A 93 TPYHALRYARDNEIRGMEYYKEAAANSAD-----PEVKRLGADFAAEEAEHVVALDKWIEKTPR 151 (167)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 34555555667999999988888776631 222334557899999999999999988744
No 107
>2hz8_A De novo designed DIIRON protein; four-helix bundle, de novo protein; NMR {Escherichia coli} PDB: 2lfd_A 2lff_A
Probab=32.25 E-value=68 Score=26.03 Aligned_cols=54 Identities=20% Similarity=0.236 Sum_probs=38.0
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCC-hhHHHhHHHHHHHHHHHHHHHHHHHHHhC
Q 022031 81 QAIVHSLAHTESWAIDLSWDIVARFGKQEAMP-REFFTDFVKVAQDEGRHFTLLAARLEELG 141 (303)
Q Consensus 81 a~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP-~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG 141 (303)
+.+|-++--=|++||++.--. ... .| .+...-.+.++.||.+|+.+....+. -|
T Consensus 34 ~~lIr~~ikaE~~AI~~Y~qL-A~~-----AP~ee~k~iI~eIr~DE~rH~~~F~~lY~-TG 88 (115)
T 2hz8_A 34 ARLIQEIVKAEKQAVKVYKEA-AEK-----ARNPEKRQVIDKILEDEEKHIEWLKAASK-QG 88 (115)
T ss_dssp TTTHHHHHHHHHHHHHHHHHH-HHS-----CCCTTTTTTHHHHHHHHHHHHHHHHHHHH-SS
T ss_pred HHHHHHHHHHHHHHHHHHHHH-Hhc-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHH-hC
Confidence 334444444499999887333 323 33 34567788999999999999999999 55
No 108
>3ez0_A Uncharacterized protein with ferritin-like fold; YP_832262.1, protein of unknown function with ferritin-like structural genomics; HET: UNL TLA; 2.33A {Arthrobacter SP}
Probab=30.09 E-value=45 Score=30.07 Aligned_cols=59 Identities=27% Similarity=0.305 Sum_probs=42.5
Q ss_pred HHHHHHHHHHhhHHHHHHH-HHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCC
Q 022031 79 SRQAIVHSLAHTESWAIDL-SWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSS 143 (303)
Q Consensus 79 ~ra~lLHaiAHIE~~AIdL-a~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~ 143 (303)
+-.-+|=-+|--|+.|..- |-|+ ++. ++|.. ..-..+.|.-|..||..|..+|.++|.+
T Consensus 15 ~v~~llg~lAygel~AF~RLa~da--~~A--P~L~~--r~ala~mAaae~~hf~~L~~~l~~~G~D 74 (225)
T 3ez0_A 15 FVADLFGMMAYGELSAFERFSADA--RYS--PTLHD--RAVLGRIAVVEFRHYELVSARLEAMGID 74 (225)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH--TTC--SSSTT--HHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHH--hhC--CCHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3455666677777777653 3343 343 34544 4567899999999999999999999976
No 109
>1za0_A Possible acyl-[acyl-carrier protein] desaturase D (acyl-[ACP] desaturase) (stearoyl-ACP...; four-helix bundle, metal binding protein; 2.00A {Mycobacterium tuberculosis} SCOP: a.25.1.2
Probab=30.08 E-value=34 Score=31.59 Aligned_cols=64 Identities=17% Similarity=0.147 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCCCccchhhHHHHHhhhhhHHHHHHHhhhhHhhcCCCCCHHHHHHHHcCCCh
Q 022031 119 FVKVAQDEGRHFTLLAARLEELGSSYGALPAHDGLWDSAIATSKDLLARLAIEHCVHEARGLDVLPTTISRFRNGGDN 196 (303)
Q Consensus 119 wl~VA~DEarHF~Ll~~rL~eLG~~YGd~P~H~gLW~~a~~T~~dllaRmAvvp~vlEArGLD~~p~~i~kl~~~GD~ 196 (303)
.-++|.||.||+..+.+.++++=-.++ ++ |...+...| -...+=|.+++--.......+..|-.
T Consensus 182 ~~~IA~DE~RH~~~y~~~v~~~le~dp-----d~-------~~~A~a~~~--~~~~MP~~~m~~~~~~~~~~~~~GvY 245 (275)
T 1za0_A 182 IDRIARDEVRHEEFFANLVTHCLDYTR-----DE-------TIAAIAARA--ADLDVLGADIEAYRDKLQNVADAGIF 245 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSH-----HH-------HHHHHHHHH--HHCCCTTTTSTTCHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCc-----HH-------HHHHHHHHH--hcCcCCcCcCchhhHHHHHHHHHcCC
Confidence 347899999999999888877421121 11 111222222 22334455566555666666666643
No 110
>3ak8_A DNA protection during starvation protein; DPS-like protein, dodecamer, iron-binding protein, metal BIN protein, oxidoreductase; HET: DNA; 1.25A {Salmonella enterica subsp} PDB: 3ak9_A* 1f33_A* 1f30_A* 1dps_A 1jts_A* 1jre_A* 1l8h_A* 1l8i_A* 4dyu_A*
Probab=27.25 E-value=2.6e+02 Score=22.93 Aligned_cols=83 Identities=14% Similarity=0.123 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCC-CC---------CCcc-chhhHHHHHhhhhhHHHHHHHhhhhHhhcCCCCCHHHH
Q 022031 119 FVKVAQDEGRHFTLLAARLEELGSS-YG---------ALPA-HDGLWDSAIATSKDLLARLAIEHCVHEARGLDVLPTTI 187 (303)
Q Consensus 119 wl~VA~DEarHF~Ll~~rL~eLG~~-YG---------d~P~-H~gLW~~a~~T~~dllaRmAvvp~vlEArGLD~~p~~i 187 (303)
+-+.+.+|..|+-.+.+|+..||.. .| .++- ..|.++.-.-...++..--.++-.+-|+
T Consensus 66 ~ee~~~e~~~~aD~lAERI~~LGg~P~~t~~~~~~~s~i~e~~~~~~~~~eml~~~l~~~~~~i~~~r~~---------- 135 (167)
T 3ak8_A 66 LDGFRTALTDHLDTMAERAVQLGGVALGTTQVINSKTPLKSYPLDIHNVQDHLKELADRYAVVANDVRKA---------- 135 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCCSCCCCSSCCBHHHHHHHHHHHHHHHHHHHHHH----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH----------
Confidence 3467788889999999999999975 33 1221 0111111111122333333444433332
Q ss_pred HHHHcCCChHHHHHHHhhcchhhhhhH
Q 022031 188 SRFRNGGDNETAKLLETVVYPEEITHC 214 (303)
Q Consensus 188 ~kl~~~GD~~sa~iL~~iI~~DEI~HV 214 (303)
+.-++|..|+++|.. |+.++-.|+
T Consensus 136 --i~~a~D~~T~dll~~-il~~~Ek~~ 159 (167)
T 3ak8_A 136 --IGEAKDEDTADIFTA-ASRDLDKFL 159 (167)
T ss_dssp --HHHCCSHHHHHHHHH-HHHHHHHHH
T ss_pred --HHHhCCHHHHHHHHH-HHHHHHHHH
Confidence 222239999999996 678888885
No 111
>1o9i_A Pseudocatalase; oxidoreductase, hexamer, dimanganese catalase, metalloenzyme, preoxidase; HET: MES; 1.33A {Lactobacillus plantarum} SCOP: a.25.1.3 PDB: 1jkv_A 1jku_A
Probab=23.77 E-value=1.6e+02 Score=26.99 Aligned_cols=66 Identities=17% Similarity=0.007 Sum_probs=48.5
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCCCCCCccch
Q 022031 80 RQAIVHSLAHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSSYGALPAHD 151 (303)
Q Consensus 80 ra~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~YGd~P~H~ 151 (303)
-.+.|++-..-|.-||-.. .-+|+.-+ ....++=+.....+|.-|+.++.+-|+++|.+.| +|+-+
T Consensus 137 l~aDL~~niaaE~~Ar~~Y-~rl~~~td----Dp~vkd~L~fLi~RE~~H~~~f~~aLe~l~~~~~-~pvp~ 202 (266)
T 1o9i_A 137 LVADMRFNVVRESEARLQV-SRLYSMTE----DEGVRDMLKFLLARETQHQLQFMKAQEELEEKYG-IIVPG 202 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHHTTCC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-SSSST
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHhcC----ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-CCCCC
Confidence 4666666667899998766 34566632 2344444556788999999999999999988777 77776
No 112
>2cf7_A DPR; peroxide resistance, DPS-family, ferritin-like, ferroxidase, iron-binding; HET: EPE; 1.50A {Streptococcus suis} PDB: 2ux1_A* 2bw1_A* 1umn_A* 2v15_A* 2xjm_A* 2xjn_A* 2xjo_A* 2xkq_A*
Probab=23.70 E-value=3e+02 Score=22.50 Aligned_cols=86 Identities=12% Similarity=0.109 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCC-CCC---------Cccchh-h-HHHHHhhhhhHHHHHHHhhhhHhhcCCCCCHHH
Q 022031 119 FVKVAQDEGRHFTLLAARLEELGSS-YGA---------LPAHDG-L-WDSAIATSKDLLARLAIEHCVHEARGLDVLPTT 186 (303)
Q Consensus 119 wl~VA~DEarHF~Ll~~rL~eLG~~-YGd---------~P~H~g-L-W~~a~~T~~dllaRmAvvp~vlEArGLD~~p~~ 186 (303)
+-+.+.+|..|+-.+.+|+..||.. .|. ++-..+ . ++.-.--..++..--.++-.+-| .
T Consensus 55 ~ee~~~e~~~haD~lAERIl~LGg~P~~t~~~~~~~s~i~e~~~~~~~~~~eml~~~l~~~~~~i~~~r~---------~ 125 (165)
T 2cf7_A 55 MDEYMEEIDGYLAEMSERLITLGGAPFSTLKEFSENSQLKEVLGDYNVTIEEQLARVVEVFRYLAALFQK---------G 125 (165)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCSCCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHH---------H
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH---------H
Confidence 3467788889999999999999975 332 111112 1 11111111244444444444444 4
Q ss_pred HHHHHcCCChHHHHHHHhhcchhhhhhH
Q 022031 187 ISRFRNGGDNETAKLLETVVYPEEITHC 214 (303)
Q Consensus 187 i~kl~~~GD~~sa~iL~~iI~~DEI~HV 214 (303)
++.....||..|+++|.. |+.++-.|+
T Consensus 126 i~~a~~~~D~~T~dll~~-il~~~Ek~~ 152 (165)
T 2cf7_A 126 FDVSDEEGDSVTNDIFNV-AKASIEKHI 152 (165)
T ss_dssp HHHHHHHTCHHHHHHHHH-HHHHHHHHH
T ss_pred HHHHhhCCCHHHHHHHHH-HHHHHHHHH
Confidence 566778899999999996 688888886
No 113
>2ouf_A Hypothetical protein; structural genomics, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Helicobacter pylori} SCOP: a.292.1.1 PDB: 2bo3_A 3mli_A
Probab=22.75 E-value=69 Score=25.15 Aligned_cols=25 Identities=24% Similarity=0.238 Sum_probs=21.7
Q ss_pred HHhhhhhHHHHHHHhhhhHhhcCCC
Q 022031 157 AIATSKDLLARLAIEHCVHEARGLD 181 (303)
Q Consensus 157 a~~T~~dllaRmAvvp~vlEArGLD 181 (303)
+.+.-..++.|+|++-..+|.+|+|
T Consensus 30 v~~ELe~llerlaamE~llEe~G~~ 54 (94)
T 2ouf_A 30 SKKELERLLELLALLETFIEKEDLE 54 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 3455678999999999999999999
No 114
>2v8t_A Manganese-containing pseudocatalase; manganese catalase, oxidoreductase; 0.98A {Thermus thermophilus} PDB: 2v8u_A 2cwl_A
Probab=22.74 E-value=3.3e+02 Score=25.32 Aligned_cols=68 Identities=16% Similarity=-0.033 Sum_probs=50.1
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHh-CCCCCC-Cccch
Q 022031 79 SRQAIVHSLAHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEEL-GSSYGA-LPAHD 151 (303)
Q Consensus 79 ~ra~lLHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eL-G~~YGd-~P~H~ 151 (303)
.-.+.|++-..-|.-||-.. .-+|+.-+ ....++=+.....+|.-|+.++.+-|+++ |.+.|. +|+-+
T Consensus 143 dl~aDL~~NiaAE~~Ar~~Y-~rL~~~td----Dp~vkd~L~fLi~RE~~H~~~f~~ALe~l~~~~~~~~~pvp~ 212 (302)
T 2v8t_A 143 NLILDLLHNFFLEVAARTHK-LRVYEMTD----NPVAREMIGYLLVRGGVHAAAYGKALESLTGVEMTKMLPIPK 212 (302)
T ss_dssp CHHHHHHHHHHHHHHHHHHH-HHHHTTCC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGGGCSSSS
T ss_pred CHHHHHHHHHHHHHHHHHHH-HHHHHhcC----ChhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCcccCCCC
Confidence 35666666667899998665 34566632 23444445567889999999999999999 788886 78766
No 115
>2uw1_A Desaturase, plastid delta4 multifunctional acyl-ACYL carrier desaturase; electron transfer, oxidoreductase, lipid synthesis, fatty AC biosynthesis; HET: GVM; 1.95A {Hedera helix} PDB: 2uw1_B* 1oq4_A 1oq7_A 1oq9_A 1oqb_A 2xz0_A* 2xz1_A* 1afr_A 2j2f_A
Probab=22.32 E-value=56 Score=31.09 Aligned_cols=19 Identities=37% Similarity=0.476 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 022031 121 KVAQDEGRHFTLLAARLEE 139 (303)
Q Consensus 121 ~VA~DEarHF~Ll~~rL~e 139 (303)
++|.||.||+..+.+.++.
T Consensus 199 ~IA~DE~RH~~~Y~~~v~~ 217 (338)
T 2uw1_A 199 SIASDEKRHATAYTKIVEK 217 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 6899999999999988873
No 116
>3sm4_A Exonuclease; homologous recombination, DNA repair, recombineering, single annealing; 1.88A {Enterobacteria phage lambda} PDB: 3slp_A 1avq_A
Probab=22.13 E-value=87 Score=27.47 Aligned_cols=30 Identities=17% Similarity=0.358 Sum_probs=24.1
Q ss_pred HhHHHHHHHHHHHH-HHHHHHHHHhCCCCCC
Q 022031 117 TDFVKVAQDEGRHF-TLLAARLEELGSSYGA 146 (303)
Q Consensus 117 ~Dwl~VA~DEarHF-~Ll~~rL~eLG~~YGd 146 (303)
.+|++...+..+.| ..+.+.++++|+.|||
T Consensus 196 ~~~i~~l~~~~~~Fw~~v~~~~~~~~~~~~~ 226 (229)
T 3sm4_A 196 EKYMASFDEIVPEFIEKMDEALAEIGFVFGE 226 (229)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCTTG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCccccc
Confidence 45666676777776 7789999999999998
No 117
>3u52_C Phenol hydroxylase component PHL; 4-helix bundle, dioxygen, hydrocarbons, oxidore; HET: MPO EPE; 1.95A {Pseudomonas stutzeri} PDB: 2inn_C* 2inp_C
Probab=20.95 E-value=2.6e+02 Score=26.14 Aligned_cols=137 Identities=13% Similarity=0.019 Sum_probs=81.0
Q ss_pred HHHHHhhHHHHHHHHHHHHHhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHhCCCCCC-CccchhhH------HH
Q 022031 84 VHSLAHTESWAIDLSWDIVARFGKQEAMPREFFTDFVKVAQDEGRHFTLLAARLEELGSSYGA-LPAHDGLW------DS 156 (303)
Q Consensus 84 LHaiAHIE~~AIdLa~Dav~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~rL~eLG~~YGd-~P~H~gLW------~~ 156 (303)
+=.+.|.|+-|-- +.=-+.|+. .-.....--+=.+.||.||...+......++..=|. .-.|.-.| +.
T Consensus 123 ~~plr~~E~ga~~-~~a~~~r~~----~~~~i~na~~fqa~DelRhaQ~ls~~~l~l~~~~g~~~~~~k~~W~~dp~Wq~ 197 (333)
T 3u52_C 123 LVPLRHVELGANM-NNAKIAGDA----TATTVSQMHIYTGMDRLGIGQYLSRIALMIDGSTGAALDESKAYWMDDEMWQP 197 (333)
T ss_dssp TTTHHHHHHHHHH-HHHHHHHHC----CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHCTTTHH
T ss_pred cchHhHHHHHHHH-HHHHHHhhc----CcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcchhhHHHHHHHhCcchHH
Confidence 3356677766532 223456663 233344444557889999999888756666433111 12333334 33
Q ss_pred HHhh------hhhHHHHHHHhhhhHhhc--CCCCCHHHHHHHHcCCChHHHHHHHhhcchhhhhhHHhhhHHHHHHHHh
Q 022031 157 AIAT------SKDLLARLAIEHCVHEAR--GLDVLPTTISRFRNGGDNETAKLLETVVYPEEITHCAAGVRWFRYLCLR 227 (303)
Q Consensus 157 a~~T------~~dllaRmAvvp~vlEAr--GLD~~p~~i~kl~~~GD~~sa~iL~~iI~~DEI~HV~~G~rWf~~lc~~ 227 (303)
+.+. ..|...-+..+.+|+|.- +|=..+ +...+...||....-+.+ +...||-.|.+.|.-=+++++++
T Consensus 198 ~R~~~Ed~~~~~Dw~E~~vA~nlv~E~ll~~L~~~~-~~~~aa~~gd~~~~~~~s-~q~d~~~Rh~~~~~alvk~ll~~ 274 (333)
T 3u52_C 198 MRKLVEDTLVVDDWFELTLVQNILIDGMMYPLVYDK-MDQWFESQGAEDVSMLTE-FMRDWYKESLRWTNAMMKAVAGE 274 (333)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHTHHHHHHHHHHHTH-HHHHHHTTTCGGGGGTSH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHH-HHHHHHHcCCceehhhHH-HhhhHHHHHHHHHHHHHHHHHhc
Confidence 2222 245566677777777753 222333 556777777766553344 43445999999999999999886
Done!