BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 022032
         (303 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|1J9J|A Chain A, Crystal Structure Analysis Of Sure Protein From T.Maritima
 pdb|1J9J|B Chain B, Crystal Structure Analysis Of Sure Protein From T.Maritima
 pdb|1J9K|A Chain A, Crystal Structure Of Sure Protein From T.Maritima In
           Complex With Tungstate
 pdb|1J9K|B Chain B, Crystal Structure Of Sure Protein From T.Maritima In
           Complex With Tungstate
 pdb|1J9L|A Chain A, Crystal Structure Of Sure Protein From T.Maritima In
           Complex With Vanadate
 pdb|1J9L|B Chain B, Crystal Structure Of Sure Protein From T.Maritima In
           Complex With Vanadate
          Length = 247

 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 63/194 (32%), Positives = 105/194 (54%), Gaps = 15/194 (7%)

Query: 69  LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEING 128
           +LVTN DGI+S G++ L E L  E  + V V AP  ++S +GHS+T+   + +    I+ 
Sbjct: 3   ILVTNDDGIQSKGIIVLAELLSEE--HEVFVVAPDKERSATGHSITIHVPLWMKKVFISE 60

Query: 129 -ATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHMFYSGVVAGAREALI 187
              AY  +GTP DCV LA +  +    +  L++SG+NRG + G  + +SG V+GA E  +
Sbjct: 61  RVVAYSTTGTPADCVKLAYNVVMDK--RVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAM 118

Query: 188 CGVPSLSISLNWKKDESQESDFKDAVSVCLPLINAATRDIGKGIFPRSCLLNVEIPTSPL 247
             +PS++IS        +  DF+ A    +  +    ++    +     +LN+ +P   +
Sbjct: 119 MNIPSIAIS----SANYESPDFEGAARFLIDFL----KEFDFSLLDPFTMLNINVPAGEI 170

Query: 248 TNKGFKFTKQSMWR 261
             KG++FT+QS  R
Sbjct: 171 --KGWRFTRQSRRR 182


>pdb|2WQK|A Chain A, Crystal Structure Of Sure Protein From Aquifex Aeolicus
 pdb|2WQK|B Chain B, Crystal Structure Of Sure Protein From Aquifex Aeolicus
          Length = 251

 Score = 98.2 bits (243), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 69/192 (35%), Positives = 98/192 (51%), Gaps = 14/192 (7%)

Query: 67  PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEI 126
           P  L+ N DG  SPG+  L EAL  + L  V V AP  + S  GHS+T  E + +   + 
Sbjct: 2   PTFLLVNDDGYFSPGINALREAL--KSLGRVVVVAPDRNLSGVGHSLTFTEPLKMRKIDT 59

Query: 127 NGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHMFYSGVVAGAREAL 186
           +  T   + GTP DCV L     +    KP LV+SGIN G + G  + YSG V+GA E  
Sbjct: 60  DFYTV--IDGTPADCVHLGYR-VILEEKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGR 116

Query: 187 ICGVPSLSISLNWKKDESQESDFKDAVSVCLPLINAATRDIGKGIFPRSCLLNVEIPTSP 246
           I G+PS++ S   +++      F++   VC+ ++      + +GI P    LNV IP   
Sbjct: 117 ILGIPSIAFSAFGRENIM----FEEIAKVCVDIVKKV---LNEGI-PEDTYLNVNIPNLR 168

Query: 247 LTN-KGFKFTKQ 257
               KG K T+Q
Sbjct: 169 YEEIKGIKVTRQ 180


>pdb|1ILV|A Chain A, Crystal Structure Analysis Of The Tm107
 pdb|1ILV|B Chain B, Crystal Structure Analysis Of The Tm107
          Length = 247

 Score = 98.2 bits (243), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 63/194 (32%), Positives = 102/194 (52%), Gaps = 15/194 (7%)

Query: 69  LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEING 128
           +LVTN DGI+S G++ L E L  E  + V V AP  ++S +GHS+T+   +      I+ 
Sbjct: 3   ILVTNDDGIQSKGIIVLAELLSEE--HEVFVVAPDKERSATGHSITIHVPLWXKKVFISE 60

Query: 129 -ATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHMFYSGVVAGAREALI 187
              AY  +GTP DCV LA +  +    +  L++SG+NRG + G  + +SG V+GA E   
Sbjct: 61  RVVAYSTTGTPADCVKLAYN--VVXDKRVDLIVSGVNRGPNXGXDILHSGTVSGAXEGAX 118

Query: 188 CGVPSLSISLNWKKDESQESDFKDAVSVCLPLINAATRDIGKGIFPRSCLLNVEIPTSPL 247
             +PS++IS        +  DF+ A    +  +    ++    +      LN+ +P   +
Sbjct: 119 XNIPSIAIS----SANYESPDFEGAARFLIDFL----KEFDFSLLDPFTXLNINVPAGEI 170

Query: 248 TNKGFKFTKQSMWR 261
             KG++FT+QS  R
Sbjct: 171 --KGWRFTRQSRRR 182


>pdb|3TY2|A Chain A, Structure Of A 5'-Nucleotidase (Sure) From Coxiella
           Burnetii
 pdb|3TY2|B Chain B, Structure Of A 5'-Nucleotidase (Sure) From Coxiella
           Burnetii
          Length = 261

 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 109/209 (52%), Gaps = 17/209 (8%)

Query: 69  LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEING 128
           LL++N DG+ + GL  L + L   G   V V AP  ++S + +S+TL   + + + E NG
Sbjct: 14  LLLSNDDGVYAKGLAILAKTLADLG--EVDVVAPDRNRSGASNSLTLNAPLHIKNLE-NG 70

Query: 129 ATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHMFYSGVVAGAREALIC 188
             +  V GTP DCV LA++G L     P  V++GIN G + G  ++YSG VA A E    
Sbjct: 71  XIS--VEGTPTDCVHLAITGVLPE--XPDXVVAGINAGPNLGDDVWYSGTVAAAXEGRFL 126

Query: 189 GVPSLSISLNWKKDESQESDFKDAVSVCLPLINAATRDIGKGIFPRSCLLNVEIPTSPLT 248
           G+P+L++SL  +     E+    A  V   LI    + I K   P S +LN+ +P  P  
Sbjct: 127 GLPALAVSLGGELFRYYET----AAKVVYQLI----QRIEKDPLPPSTILNINVPDLPYE 178

Query: 249 N-KGFKFTK-QSMWRSTPNWQAVSANRYP 275
             KGF+ T+  +  R+ P  + +    +P
Sbjct: 179 ELKGFEVTRLGTRHRAEPTIRQIDPRGHP 207


>pdb|2E69|A Chain A, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 In Complex With
           Sulfate
 pdb|2E69|B Chain B, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 In Complex With
           Sulfate
 pdb|2E69|C Chain C, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 In Complex With
           Sulfate
 pdb|2E69|D Chain D, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 In Complex With
           Sulfate
 pdb|2E6B|A Chain A, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 In Complex With
           Magnesium And Tungstate
 pdb|2E6B|B Chain B, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 In Complex With
           Magnesium And Tungstate
 pdb|2E6B|C Chain C, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 In Complex With
           Magnesium And Tungstate
 pdb|2E6B|D Chain D, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 In Complex With
           Magnesium And Tungstate
 pdb|2E6C|A Chain A, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 Cocrystallized With
           Manganese And Amp
 pdb|2E6C|B Chain B, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 Cocrystallized With
           Manganese And Amp
 pdb|2E6C|C Chain C, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 Cocrystallized With
           Manganese And Amp
 pdb|2E6C|D Chain D, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 Cocrystallized With
           Manganese And Amp
 pdb|2E6E|A Chain A, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8
 pdb|2E6E|B Chain B, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8
 pdb|2E6E|C Chain C, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8
 pdb|2E6E|D Chain D, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8
 pdb|2E6G|A Chain A, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 In Complex With
           Phosphate
 pdb|2E6G|B Chain B, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 In Complex With
           Phosphate
 pdb|2E6G|C Chain C, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 In Complex With
           Phosphate
 pdb|2E6G|D Chain D, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 In Complex With
           Phosphate
 pdb|2E6G|E Chain E, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 In Complex With
           Phosphate
 pdb|2E6G|F Chain F, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 In Complex With
           Phosphate
 pdb|2E6G|G Chain G, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 In Complex With
           Phosphate
 pdb|2E6G|H Chain H, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 In Complex With
           Phosphate
 pdb|2E6G|I Chain I, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 In Complex With
           Phosphate
 pdb|2E6G|J Chain J, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 In Complex With
           Phosphate
 pdb|2E6G|K Chain K, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 In Complex With
           Phosphate
 pdb|2E6G|L Chain L, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 In Complex With
           Phosphate
          Length = 244

 Score = 90.5 bits (223), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/198 (35%), Positives = 104/198 (52%), Gaps = 28/198 (14%)

Query: 69  LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAV----SSA 124
           +LVTN DGI SPGL  L EA  + G   V V AP +++S +GH++T+   +      S  
Sbjct: 3   ILVTNDDGIYSPGLWALAEAASQFG--EVFVAAPDTEQSAAGHAITIAHPVRAYPHPSPL 60

Query: 125 EINGATAYEVSGTPVDCVSLALSGALFSWSKPL-LVISGINRGSSCGHHMFYSGVVAGAR 183
                 AY V GTP DCV+L L   LF    P+ LV+SG+N GS+ GH +++SG VA A+
Sbjct: 61  HAPHFPAYRVRGTPADCVALGLH--LFG---PVDLVLSGVNLGSNLGHEIWHSGTVAAAK 115

Query: 184 EALICGV--PSLSISLNWKKDESQESDFKDAVSVCLPLINAATRDIGKGIFPRSCLLNVE 241
           +  + G+   + S+ LN      +  DF        P +      + +   P   L+NV 
Sbjct: 116 QGYLFGLSAAAFSVPLN-----GEVPDFAG----LRPWLLRTLETLLRLERP--FLVNVN 164

Query: 242 IPTSPLTNKGFKFTKQSM 259
           +P  P   KGF +T+QS+
Sbjct: 165 LPLRP---KGFLWTRQSV 179


>pdb|2E6H|A Chain A, Crystal Structure Of E37a Mutant Of The Stationary Phase
           Survival Protein Sure From Thermus Thermophilus Hb8
           Cocrystallized With Manganese And Amp
 pdb|2E6H|B Chain B, Crystal Structure Of E37a Mutant Of The Stationary Phase
           Survival Protein Sure From Thermus Thermophilus Hb8
           Cocrystallized With Manganese And Amp
 pdb|2E6H|C Chain C, Crystal Structure Of E37a Mutant Of The Stationary Phase
           Survival Protein Sure From Thermus Thermophilus Hb8
           Cocrystallized With Manganese And Amp
 pdb|2E6H|D Chain D, Crystal Structure Of E37a Mutant Of The Stationary Phase
           Survival Protein Sure From Thermus Thermophilus Hb8
           Cocrystallized With Manganese And Amp
          Length = 244

 Score = 89.4 bits (220), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/198 (35%), Positives = 103/198 (52%), Gaps = 28/198 (14%)

Query: 69  LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAV----SSA 124
           +LVTN DGI SPGL  L EA  + G   V V AP + +S +GH++T+   +      S  
Sbjct: 3   ILVTNDDGIYSPGLWALAEAASQFG--EVFVAAPDTAQSAAGHAITIAHPVRAYPHPSPL 60

Query: 125 EINGATAYEVSGTPVDCVSLALSGALFSWSKPL-LVISGINRGSSCGHHMFYSGVVAGAR 183
                 AY V GTP DCV+L L   LF    P+ LV+SG+N GS+ GH +++SG VA A+
Sbjct: 61  HAPHFPAYRVRGTPADCVALGLH--LFG---PVDLVLSGVNLGSNLGHEIWHSGTVAAAK 115

Query: 184 EALICGV--PSLSISLNWKKDESQESDFKDAVSVCLPLINAATRDIGKGIFPRSCLLNVE 241
           +  + G+   + S+ LN      +  DF        P +      + +   P   L+NV 
Sbjct: 116 QGYLFGLSAAAFSVPLN-----GEVPDFAG----LRPWLLRTLETLLRLERP--FLVNVN 164

Query: 242 IPTSPLTNKGFKFTKQSM 259
           +P  P   KGF +T+QS+
Sbjct: 165 LPLRP---KGFLWTRQSV 179


>pdb|2V4O|A Chain A, Crystal Structure Of Salmonella Typhimurium Sure At 2.75
           Angstrom Resolution In Monoclinic Form
 pdb|2V4O|B Chain B, Crystal Structure Of Salmonella Typhimurium Sure At 2.75
           Angstrom Resolution In Monoclinic Form
 pdb|2V4O|C Chain C, Crystal Structure Of Salmonella Typhimurium Sure At 2.75
           Angstrom Resolution In Monoclinic Form
 pdb|2V4O|D Chain D, Crystal Structure Of Salmonella Typhimurium Sure At 2.75
           Angstrom Resolution In Monoclinic Form
          Length = 267

 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 102/189 (53%), Gaps = 17/189 (8%)

Query: 69  LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEING 128
           +L++N DG+ +PG+  L +AL RE   +V V AP  ++S + +S+TL  ++   + + NG
Sbjct: 17  ILLSNDDGVHAPGIQTLAKAL-RE-FADVQVVAPDRNRSGASNSLTLESSLRTFTFD-NG 73

Query: 129 ATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHMFYSGVVAGAREALIC 188
             A ++ GTP DCV L ++  +    +P +V+SGIN G + G  + YSG VA A E    
Sbjct: 74  DIAVQM-GTPTDCVYLGVNALMRP--RPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHL 130

Query: 189 GVPSLSISLNWKKDESQESDFKDAVSVCLPLINAATRDIGKGIFPRSCLLNVEIPTSPLT 248
           G P+L++SLN      Q  D   AV+  L       R + +       +LNV +P  PL 
Sbjct: 131 GFPALAVSLNGY----QHYDTAAAVTCAL------LRGLSREPLRTGRILNVNVPDLPLA 180

Query: 249 N-KGFKFTK 256
             KG + T+
Sbjct: 181 QVKGIRVTR 189


>pdb|2V4N|A Chain A, Crystal Structure Of Salmonella Typhimurium Sure At 1.7
           Angstrom Resolution In Orthorhombic Form
          Length = 254

 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 102/189 (53%), Gaps = 17/189 (8%)

Query: 69  LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEING 128
           +L++N DG+ +PG+  L +AL RE   +V V AP  ++S + +S+TL  ++   + + NG
Sbjct: 4   ILLSNDDGVHAPGIQTLAKAL-RE-FADVQVVAPDRNRSGASNSLTLESSLRTFTFD-NG 60

Query: 129 ATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHMFYSGVVAGAREALIC 188
             A ++ GTP DCV L ++  +    +P +V+SGIN G + G  + YSG VA A E    
Sbjct: 61  DIAVQM-GTPTDCVYLGVNALMRP--RPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHL 117

Query: 189 GVPSLSISLNWKKDESQESDFKDAVSVCLPLINAATRDIGKGIFPRSCLLNVEIPTSPLT 248
           G P+L++SLN      Q  D   AV+  L       R + +       +LNV +P  PL 
Sbjct: 118 GFPALAVSLNGY----QHYDTAAAVTCAL------LRGLSREPLRTGRILNVNVPDLPLA 167

Query: 249 N-KGFKFTK 256
             KG + T+
Sbjct: 168 QVKGIRVTR 176


>pdb|1L5X|A Chain A, The 2.0-Angstrom Resolution Crystal Structure Of A
           Survival Protein E (Sure) Homolog From Pyrobaculum
           Aerophilum
 pdb|1L5X|B Chain B, The 2.0-Angstrom Resolution Crystal Structure Of A
           Survival Protein E (Sure) Homolog From Pyrobaculum
           Aerophilum
          Length = 280

 Score = 70.9 bits (172), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 49/137 (35%), Positives = 73/137 (53%), Gaps = 9/137 (6%)

Query: 69  LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEING 128
           +LVTN DG+ SPGL  L +  +  G  +V V AP+S KS +G  +TL + +     ++ G
Sbjct: 3   ILVTNDDGVHSPGLRLLYQFALSLG--DVDVVAPESPKSATGLGITLHKPLRXYEVDLCG 60

Query: 129 ATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHMFY-SGVVAGAREALI 187
             A   SGTP D V LA  G    +    +V+SGIN G +    +   SG +  A +A +
Sbjct: 61  FRAIATSGTPSDTVYLATFGLGRKYD---IVLSGINLGDNTSLQVILSSGTLGAAFQAAL 117

Query: 188 CGVPSLSISL---NWKK 201
            G+P+L+ S    NW +
Sbjct: 118 LGIPALAYSAYLENWNE 134


>pdb|4EQB|A Chain A, 1.5 Angstrom Crystal Structure Of SpermidinePUTRESCINE ABC
           Transporter Substrate-Binding Protein From Streptococcus
           Pneumoniae Strain Canada Mdr_19a In Complex With Calcium
           And Hepes.
 pdb|4EQB|B Chain B, 1.5 Angstrom Crystal Structure Of SpermidinePUTRESCINE ABC
           Transporter Substrate-Binding Protein From Streptococcus
           Pneumoniae Strain Canada Mdr_19a In Complex With Calcium
           And Hepes
          Length = 330

 Score = 29.6 bits (65), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 178 VVAGAREALICGVPSLSISLNWKKDESQESDFKDAVSVCLPLINAATRDIGKG 230
           +  GARE L  G+ SL  SLN  KD  Q  +  D +    P I A   D  KG
Sbjct: 145 LFDGAREVLGLGLNSLGYSLN-SKDPQQLEETVDKLYKLTPNIKAIVADEMKG 196


>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum
 pdb|3T6V|B Chain B, Crystal Structure Of Laccase From Steccherinum Ochraceum
 pdb|3T6V|C Chain C, Crystal Structure Of Laccase From Steccherinum Ochraceum
 pdb|3T6W|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
           Obtained By Multi- Crystals Composite Data Collection
           Technique (10% Dose)
 pdb|3T6W|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
           Obtained By Multi- Crystals Composite Data Collection
           Technique (10% Dose)
 pdb|3T6W|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
           Obtained By Multi- Crystals Composite Data Collection
           Technique (10% Dose)
 pdb|3T6X|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
           Obtained By Multi- Crystals Composite Data Collection
           Technique (20% Dose)
 pdb|3T6X|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
           Obtained By Multi- Crystals Composite Data Collection
           Technique (20% Dose)
 pdb|3T6X|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
           Obtained By Multi- Crystals Composite Data Collection
           Technique (20% Dose)
 pdb|3T6Z|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
           Obtained By Multi- Crystals Composite Data Collection
           Technique (60% Dose)
 pdb|3T6Z|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
           Obtained By Multi- Crystals Composite Data Collection
           Technique (60% Dose)
 pdb|3T6Z|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
           Obtained By Multi- Crystals Composite Data Collection
           Technique (60% Dose)
 pdb|3T71|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
           Obtained By Multi- Crystals Composite Data Collection
           Technique (90% Dose)
 pdb|3T71|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
           Obtained By Multi- Crystals Composite Data Collection
           Technique (90% Dose)
 pdb|3T71|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
           Obtained By Multi- Crystals Composite Data Collection
           Technique (90% Dose)
          Length = 495

 Score = 29.6 bits (65), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 100 CAPQSDKSVSGHSVTLRETIAVSSAEI 126
           C P  D S+ GH +T+ ET  V S E+
Sbjct: 208 CDPNYDFSIDGHDMTIIETDGVDSQEL 234


>pdb|2X2Y|A Chain A, Cellulomonas Fimi Endo-Beta-1,4-Mannanase Double Mutant
 pdb|2X2Y|B Chain B, Cellulomonas Fimi Endo-Beta-1,4-Mannanase Double Mutant
          Length = 475

 Score = 29.3 bits (64), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 6/62 (9%)

Query: 97  VHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVS--GTPVDCVSLALSGALFSWS 154
           VH+ +P     V+    T+R  + V   ++   T  EV+  GT VD + LA  GAL+ W+
Sbjct: 375 VHIASPADGARVASAPTTVR--VRVGGTDVQSVTV-EVAQGGTVVDTLDLAYDGALW-WT 430

Query: 155 KP 156
            P
Sbjct: 431 AP 432


>pdb|2BVT|A Chain A, The Structure Of A Modular Endo-Beta-1,4-Mannanase From
           Cellulomonas Fimi Explains The Product Specificity Of
           Glycoside Hydrolase Family 26 Mannanases.
 pdb|2BVT|B Chain B, The Structure Of A Modular Endo-Beta-1,4-Mannanase From
           Cellulomonas Fimi Explains The Product Specificity Of
           Glycoside Hydrolase Family 26 Mannanases.
 pdb|2BVY|A Chain A, The Structure And Characterization Of A Modular
           Endo-Beta-1, 4-Mannanase From Cellulomonas Fimi
          Length = 475

 Score = 29.3 bits (64), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 6/62 (9%)

Query: 97  VHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVS--GTPVDCVSLALSGALFSWS 154
           VH+ +P     V+    T+R  + V   ++   T  EV+  GT VD + LA  GAL+ W+
Sbjct: 375 VHIASPADGARVASAPTTVR--VRVGGTDVQSVTV-EVAQGGTVVDTLDLAYDGALW-WT 430

Query: 155 KP 156
            P
Sbjct: 431 AP 432


>pdb|3TP4|A Chain A, Crystal Structure Of Engineered Protein At The Resolution
           1.98a, Northeast Structural Genomics Consortium Target
           Or128
 pdb|3TP4|B Chain B, Crystal Structure Of Engineered Protein At The Resolution
           1.98a, Northeast Structural Genomics Consortium Target
           Or128
          Length = 475

 Score = 29.3 bits (64), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 6/62 (9%)

Query: 97  VHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVS--GTPVDCVSLALSGALFSWS 154
           VH+ +P     V+    T+R  + V   ++   T  EV+  GT VD + LA  GAL+ W+
Sbjct: 375 VHIASPADGARVASAPTTVR--VRVGGTDVQSVTV-EVAQGGTVVDTLDLAYDGALW-WT 430

Query: 155 KP 156
            P
Sbjct: 431 AP 432


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.315    0.130    0.382 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,561,203
Number of Sequences: 62578
Number of extensions: 278233
Number of successful extensions: 604
Number of sequences better than 100.0: 18
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 569
Number of HSP's gapped (non-prelim): 18
length of query: 303
length of database: 14,973,337
effective HSP length: 98
effective length of query: 205
effective length of database: 8,840,693
effective search space: 1812342065
effective search space used: 1812342065
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 51 (24.3 bits)