Query 022032
Match_columns 303
No_of_seqs 183 out of 1150
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 12:58:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022032.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022032hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2phj_A 5'-nucleotidase SURE; S 100.0 6E-66 2E-70 477.0 20.3 195 67-277 2-197 (251)
2 1j9j_A Stationary phase surviV 100.0 8.5E-66 2.9E-70 474.9 19.7 194 67-277 1-195 (247)
3 2wqk_A 5'-nucleotidase SURE; S 100.0 1.6E-65 5.4E-70 473.4 20.6 196 67-278 2-198 (251)
4 3ty2_A 5'-nucleotidase SURE; s 100.0 9.8E-66 3.3E-70 477.6 17.3 197 64-278 9-206 (261)
5 2v4n_A Multifunctional protein 100.0 4.2E-65 1.4E-69 472.0 18.6 192 66-277 1-194 (254)
6 2e6c_A 5'-nucleotidase SURE; S 100.0 1.7E-64 5.7E-69 465.6 19.2 190 67-277 1-194 (244)
7 1l5x_A SurviVal protein E; str 100.0 1.6E-64 5.4E-69 473.8 17.5 199 67-278 1-205 (280)
8 3oti_A CALG3; calicheamicin, T 96.3 0.011 3.8E-07 54.6 8.2 41 61-102 15-56 (398)
9 4fzr_A SSFS6; structural genom 95.6 0.034 1.2E-06 51.2 8.3 41 63-104 12-53 (398)
10 4amg_A Snogd; transferase, pol 95.3 0.053 1.8E-06 49.4 8.2 44 58-105 14-61 (400)
11 3tsa_A SPNG, NDP-rhamnosyltran 94.8 0.082 2.8E-06 48.2 8.3 37 66-103 1-38 (391)
12 3rsc_A CALG2; TDP, enediyne, s 94.6 0.092 3.1E-06 48.3 8.1 45 59-104 13-58 (415)
13 3otg_A CALG1; calicheamicin, T 94.6 0.053 1.8E-06 49.6 6.4 41 62-103 16-57 (412)
14 3fro_A GLGA glycogen synthase; 94.2 0.5 1.7E-05 42.8 11.9 41 65-106 1-47 (439)
15 3h4t_A Glycosyltransferase GTF 93.8 0.055 1.9E-06 50.6 4.8 37 67-104 1-38 (404)
16 3ia7_A CALG4; glycosysltransfe 93.8 0.13 4.4E-06 46.7 7.1 36 67-103 5-41 (402)
17 2iya_A OLEI, oleandomycin glyc 93.0 0.46 1.6E-05 44.0 9.7 38 65-106 11-52 (424)
18 2iyf_A OLED, oleandomycin glyc 90.3 0.72 2.5E-05 42.6 7.8 36 66-105 7-46 (430)
19 2iuy_A Avigt4, glycosyltransfe 78.3 1.4 4.7E-05 39.1 3.4 41 65-106 2-59 (342)
20 3kkl_A Probable chaperone prot 70.3 1.5 5E-05 39.3 1.4 43 63-106 2-54 (244)
21 2r60_A Glycosyl transferase, g 67.8 3.4 0.00012 38.9 3.5 40 65-105 6-61 (499)
22 2yjn_A ERYCIII, glycosyltransf 66.0 5.1 0.00017 37.4 4.2 37 64-104 18-58 (441)
23 3vue_A GBSS-I, granule-bound s 65.5 6.2 0.00021 38.9 4.9 45 60-105 3-54 (536)
24 2gek_A Phosphatidylinositol ma 62.8 9.5 0.00032 34.0 5.2 42 65-107 19-65 (406)
25 2lpm_A Two-component response 61.0 6.3 0.00022 31.5 3.4 86 61-198 3-88 (123)
26 1rzu_A Glycogen synthase 1; gl 61.0 4.7 0.00016 37.6 3.0 37 67-104 1-44 (485)
27 1f0k_A MURG, UDP-N-acetylgluco 61.0 7 0.00024 34.6 4.0 35 66-104 6-44 (364)
28 3c48_A Predicted glycosyltrans 60.8 7.1 0.00024 35.5 4.1 41 64-105 18-70 (438)
29 3s2u_A UDP-N-acetylglucosamine 60.8 8.6 0.00029 35.4 4.7 31 67-101 3-37 (365)
30 2qzs_A Glycogen synthase; glyc 59.5 5.2 0.00018 37.3 3.0 37 67-104 1-44 (485)
31 2iw1_A Lipopolysaccharide core 59.4 7 0.00024 34.5 3.7 37 67-104 1-41 (374)
32 3n7t_A Macrophage binding prot 59.2 8.2 0.00028 34.6 4.1 41 65-106 10-60 (247)
33 1oi4_A Hypothetical protein YH 57.1 19 0.00064 30.3 5.9 40 66-106 23-62 (193)
34 3gpi_A NAD-dependent epimerase 56.9 15 0.00051 31.8 5.3 33 66-105 3-37 (286)
35 3dqp_A Oxidoreductase YLBE; al 56.1 83 0.0029 25.8 10.6 105 67-198 1-107 (219)
36 4b4o_A Epimerase family protei 55.7 12 0.00039 32.8 4.4 31 67-101 1-31 (298)
37 1wd5_A Hypothetical protein TT 55.3 15 0.00053 31.3 5.1 41 65-106 119-160 (208)
38 2x6q_A Trehalose-synthase TRET 53.6 19 0.00067 32.5 5.7 40 64-105 38-81 (416)
39 1rrv_A Glycosyltransferase GTF 53.1 9.4 0.00032 35.1 3.5 35 67-105 1-39 (416)
40 2p6p_A Glycosyl transferase; X 51.7 7.9 0.00027 34.9 2.7 37 67-104 1-38 (384)
41 1iir_A Glycosyltransferase GTF 51.6 14 0.00047 34.1 4.4 36 67-106 1-40 (415)
42 2rk3_A Protein DJ-1; parkinson 50.5 10 0.00034 31.9 3.1 35 68-105 7-41 (197)
43 1kjq_A GART 2, phosphoribosylg 49.0 92 0.0032 28.2 9.6 39 63-106 8-46 (391)
44 3t8y_A CHEB, chemotaxis respon 48.8 31 0.0011 27.1 5.6 37 155-198 71-107 (164)
45 1rw7_A YDR533CP; alpha-beta sa 47.9 12 0.00042 32.7 3.3 40 65-105 4-53 (243)
46 3l18_A Intracellular protease 47.4 9.8 0.00034 30.9 2.4 38 66-104 2-39 (168)
47 1u9c_A APC35852; structural ge 46.3 22 0.00076 30.2 4.6 41 65-106 6-54 (224)
48 2iuf_A Catalase; oxidoreductas 45.9 7.1 0.00024 40.6 1.6 42 62-104 527-568 (688)
49 4hcj_A THIJ/PFPI domain protei 45.5 5.5 0.00019 33.9 0.6 43 62-105 4-46 (177)
50 2dtx_A Glucose 1-dehydrogenase 43.0 70 0.0024 27.7 7.5 73 65-161 7-80 (264)
51 3gem_A Short chain dehydrogena 40.4 19 0.00066 31.4 3.4 148 61-226 22-187 (260)
52 4e08_A DJ-1 beta; flavodoxin-l 40.3 25 0.00084 29.2 3.9 33 69-104 10-42 (190)
53 2vrn_A Protease I, DR1199; cys 39.7 18 0.00063 29.8 3.0 39 66-105 9-47 (190)
54 3ius_A Uncharacterized conserv 39.7 31 0.0011 29.6 4.6 31 66-103 5-37 (286)
55 2x0d_A WSAF; GT4 family, trans 38.9 18 0.00063 33.9 3.2 40 63-104 43-89 (413)
56 3un1_A Probable oxidoreductase 38.6 1.9E+02 0.0065 24.8 14.0 99 65-185 27-138 (260)
57 1n57_A Chaperone HSP31, protei 37.4 24 0.00082 32.1 3.6 31 75-106 71-101 (291)
58 3re1_A Uroporphyrinogen-III sy 37.2 19 0.00066 31.8 2.9 36 60-100 8-43 (269)
59 3vot_A L-amino acid ligase, BL 37.2 1.7E+02 0.0059 26.9 9.6 40 62-106 1-40 (425)
60 4dim_A Phosphoribosylglycinami 37.0 82 0.0028 28.8 7.2 34 64-102 5-38 (403)
61 3to5_A CHEY homolog; alpha(5)b 36.7 32 0.0011 27.6 3.9 39 154-198 56-96 (134)
62 3cwc_A Putative glycerate kina 34.8 72 0.0025 30.8 6.6 42 155-198 287-328 (383)
63 3vtz_A Glucose 1-dehydrogenase 34.6 1E+02 0.0036 26.7 7.2 75 64-161 12-87 (269)
64 2r85_A PURP protein PF1517; AT 32.0 47 0.0016 29.2 4.5 34 66-105 2-35 (334)
65 3orf_A Dihydropteridine reduct 31.9 2E+02 0.0067 24.4 8.5 70 67-161 23-93 (251)
66 3h5i_A Response regulator/sens 31.7 40 0.0014 25.4 3.6 39 154-199 49-88 (140)
67 3okp_A GDP-mannose-dependent a 31.3 12 0.00042 33.0 0.6 40 64-106 2-46 (394)
68 1ccw_A Protein (glutamate muta 30.6 55 0.0019 26.2 4.3 34 65-100 2-37 (137)
69 2rdm_A Response regulator rece 30.5 53 0.0018 24.0 4.0 38 155-198 50-88 (132)
70 3efe_A THIJ/PFPI family protei 30.4 63 0.0021 27.5 5.0 36 69-105 8-51 (212)
71 3ot1_A 4-methyl-5(B-hydroxyeth 29.3 35 0.0012 28.9 3.1 36 68-104 11-46 (208)
72 4gi5_A Quinone reductase; prot 29.2 30 0.001 31.7 2.8 40 60-100 16-59 (280)
73 2pn1_A Carbamoylphosphate synt 29.1 85 0.0029 27.6 5.8 36 64-104 2-38 (331)
74 3s28_A Sucrose synthase 1; gly 28.9 1.7E+02 0.0056 30.7 8.7 39 65-104 277-341 (816)
75 2nm0_A Probable 3-oxacyl-(acyl 28.8 2.1E+02 0.0073 24.4 8.2 73 65-161 20-93 (253)
76 4gdh_A DJ-1, uncharacterized p 28.6 58 0.002 27.4 4.3 40 64-106 4-43 (194)
77 1sy7_A Catalase 1; heme oxidat 28.5 1.8E+02 0.0062 30.2 8.8 38 67-105 535-572 (715)
78 3ono_A Ribose/galactose isomer 28.4 39 0.0013 30.2 3.3 36 66-102 3-41 (214)
79 2dwc_A PH0318, 433AA long hypo 28.3 1.7E+02 0.0057 27.1 7.9 37 65-106 18-54 (433)
80 4h15_A Short chain alcohol deh 27.9 2.5E+02 0.0086 24.6 8.7 99 65-186 10-123 (261)
81 4g41_A MTA/SAH nucleosidase; m 27.8 1.3E+02 0.0044 25.6 6.5 46 179-224 181-231 (236)
82 3u27_C Microcompartments prote 27.5 30 0.001 31.1 2.4 106 79-190 48-207 (220)
83 2xgg_A Microneme protein 2; A/ 26.8 47 0.0016 26.9 3.4 34 65-101 123-158 (178)
84 1v4v_A UDP-N-acetylglucosamine 26.6 29 0.001 30.8 2.2 20 175-196 281-300 (376)
85 2fex_A Conserved hypothetical 26.6 67 0.0023 26.4 4.3 37 68-105 3-40 (188)
86 1id1_A Putative potassium chan 26.5 63 0.0021 25.4 4.0 33 66-103 3-35 (153)
87 2dzd_A Pyruvate carboxylase; b 26.4 1.3E+02 0.0044 28.2 6.8 35 67-106 7-41 (461)
88 1vi7_A Hypothetical protein YI 26.3 48 0.0016 29.6 3.5 30 71-101 71-102 (217)
89 2ab0_A YAJL; DJ-1/THIJ superfa 26.1 39 0.0013 28.5 2.8 34 69-105 7-40 (205)
90 2geb_A Hypoxanthine-guanine ph 26.1 47 0.0016 27.7 3.3 43 65-108 97-140 (185)
91 2cve_A Hypothetical protein TT 25.9 50 0.0017 28.9 3.5 30 71-101 59-90 (191)
92 3uk7_A Class I glutamine amido 25.2 56 0.0019 30.3 4.0 39 67-106 206-244 (396)
93 3zbd_A NSP1, P9, non-structura 25.2 18 0.00061 29.4 0.4 31 59-90 6-36 (113)
94 1z7g_A HGPRT, HGPRTASE, hypoxa 25.1 55 0.0019 28.3 3.6 41 66-107 126-167 (217)
95 3beo_A UDP-N-acetylglucosamine 25.0 35 0.0012 30.1 2.3 19 176-196 290-308 (375)
96 1vhq_A Enhancing lycopene bios 24.8 43 0.0015 28.9 2.9 38 67-105 9-49 (232)
97 1yfz_A Hypoxanthine-guanine ph 24.7 45 0.0015 28.4 3.0 42 66-108 118-160 (205)
98 3o4v_A MTA/SAH nucleosidase; m 24.2 1.1E+02 0.0038 26.0 5.4 50 178-227 177-231 (234)
99 1hgx_A HGXPRTASE, hypoxanthine 24.1 54 0.0019 27.2 3.3 42 65-107 94-136 (183)
100 3hv2_A Response regulator/HD d 24.0 62 0.0021 24.7 3.4 39 154-198 57-95 (153)
101 2vyo_A ECU11_0510, chitooligos 23.7 55 0.0019 28.8 3.4 35 64-99 23-57 (254)
102 2jbh_A Phosphoribosyltransfera 23.7 54 0.0018 28.5 3.3 42 65-107 133-175 (225)
103 1tc1_A Protein (hypoxanthine p 23.4 55 0.0019 28.6 3.3 43 65-108 102-145 (220)
104 3ew7_A LMO0794 protein; Q8Y8U8 23.3 88 0.003 25.3 4.4 33 67-103 1-33 (221)
105 1pzm_A HGPRT, hypoxanthine-gua 23.2 57 0.002 28.1 3.4 43 65-108 117-160 (211)
106 3gfh_A Ethanolamine utilizatio 22.8 16 0.00054 33.1 -0.3 52 133-187 150-202 (225)
107 3h2s_A Putative NADH-flavin re 22.7 91 0.0031 25.4 4.4 103 67-196 1-104 (224)
108 1sph_A Histidine-containing ph 22.2 45 0.0015 25.1 2.2 76 68-150 5-81 (88)
109 1hdo_A Biliverdin IX beta redu 22.0 1.2E+02 0.004 24.2 4.8 106 67-198 4-112 (206)
110 3ej6_A Catalase-3; heme, hydro 21.7 2.7E+02 0.0093 28.9 8.5 40 63-105 536-576 (688)
111 1ka5_A Phosphocarrier protein 21.6 66 0.0022 24.2 3.0 33 68-101 5-37 (88)
112 1y51_A Phosphocarrier protein 21.5 54 0.0018 24.7 2.5 33 68-101 5-37 (88)
113 3enk_A UDP-glucose 4-epimerase 21.5 1.2E+02 0.0042 26.4 5.3 33 65-102 4-37 (341)
114 2wzn_A TET3, 354AA long hypoth 21.4 50 0.0017 27.9 2.6 25 176-200 295-319 (354)
115 3hzh_A Chemotaxis response reg 21.4 77 0.0026 24.4 3.5 38 155-198 83-120 (157)
116 3l3b_A ES1 family protein; ssg 21.1 94 0.0032 27.4 4.4 38 68-106 27-67 (242)
117 1kkl_H Phosphocarrier protein 21.0 63 0.0022 25.2 2.9 38 63-101 12-49 (100)
118 3oig_A Enoyl-[acyl-carrier-pro 20.9 1.5E+02 0.0052 25.1 5.7 89 64-162 5-94 (266)
119 1vdm_A Purine phosphoribosyltr 20.9 54 0.0019 26.1 2.6 34 66-100 83-117 (153)
120 1d7o_A Enoyl-[acyl-carrier pro 20.7 1.4E+02 0.0047 26.0 5.4 35 63-101 5-41 (297)
121 3jte_A Response regulator rece 20.6 91 0.0031 23.1 3.7 39 154-198 48-86 (143)
122 1sby_A Alcohol dehydrogenase; 20.2 1.4E+02 0.0047 25.2 5.2 35 64-103 3-39 (254)
123 3cg4_A Response regulator rece 20.1 1E+02 0.0035 22.8 3.9 39 154-198 50-90 (142)
124 1fsg_A HGPRTASE, hypoxanthine- 20.0 72 0.0024 27.9 3.4 42 66-108 142-184 (233)
125 3i42_A Response regulator rece 20.0 73 0.0025 23.2 3.0 39 154-198 46-86 (127)
No 1
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=100.00 E-value=6e-66 Score=476.97 Aligned_cols=195 Identities=36% Similarity=0.517 Sum_probs=174.5
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEeeCCCCcccccccCCCCceEEEEeeeCCceeEEecCChHHHHHHHH
Q 022032 67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVSLAL 146 (303)
Q Consensus 67 ~~ILlTNDDGi~SpGI~aL~~aL~~~G~~dV~VVAP~~~qSg~g~siT~~~pl~v~~v~~~g~~~yaV~GTPaDCV~laL 146 (303)
|||||||||||+||||++|+++|++.| +|+||||++||||+||++|+++||++++++. +.. |+|+|||+|||++||
T Consensus 2 M~ILlTNDDGi~apGi~aL~~~l~~~g--~V~VVAP~~~~Sg~g~sit~~~pl~~~~~~~-~~~-~~v~GTPaDCV~lal 77 (251)
T 2phj_A 2 PTFLLVNDDGYFSPGINALREALKSLG--RVVVVAPDRNLSGVGHSLTFTEPLKMRKIDT-DFY-TVIDGTPADCVHLGY 77 (251)
T ss_dssp CEEEEECSSCTTCHHHHHHHHHHTTTS--EEEEEEESSCCTTSCCSCCCSSCEEEEEEET-TEE-EETTCCHHHHHHHHH
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHhcC--CEEEEecCCCccCCccceecCCCeEEEEecC-CCe-EEECCCHHHHHHHHH
Confidence 899999999999999999999999986 9999999999999999999999999999863 222 999999999999999
Q ss_pred hccccCCCCCcEEEecCCCCCCCccccccchhHHHHHHHHHcCCCeeEEecccCCCCCCCcChHHHHHHHHHHHHHHHHH
Q 022032 147 SGALFSWSKPLLVISGINRGSSCGHHMFYSGVVAGAREALICGVPSLSISLNWKKDESQESDFKDAVSVCLPLINAATRD 226 (303)
Q Consensus 147 ~~~l~~~~~PDLVVSGIN~G~N~G~dv~ySGTVgAA~EA~l~GIPAIAvS~~~~~~~~~~~d~~~aa~~~~~li~~l~~~ 226 (303)
+++++ +.+|||||||||+|.|+|.+++||||||||+||+++||||||||+... ...+|+.|++++.+|+++++
T Consensus 78 ~~l~~-~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~~~----~~~~~~~aa~~~~~lv~~l~-- 150 (251)
T 2phj_A 78 RVILE-EKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAFGR----ENIMFEEIAKVCVDIVKKVL-- 150 (251)
T ss_dssp HTTTT-TCCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEECS----SSCCHHHHHHHHHHHHHHHH--
T ss_pred HHhcC-CCCCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEcCCC----CccCHHHHHHHHHHHHHHHH--
Confidence 98764 468999999999999999999999999999999999999999999743 23479999999999988875
Q ss_pred hhcCCCCCCcEEEecCCCCCC-CCCceEEEecCCcccCCcccccccccCCCC
Q 022032 227 IGKGIFPRSCLLNVEIPTSPL-TNKGFKFTKQSMWRSTPNWQAVSANRYPAG 277 (303)
Q Consensus 227 ~~~~~lp~~~~LNVN~P~~~~-~~kGvk~Tr~g~~~~~~~~~~~~~~r~p~g 277 (303)
+..+|++++||||||.++. +.||+|+||||+++|.. .+..+.||+|
T Consensus 151 --~~~lp~~~~lNVN~P~~~~~~~kgi~~tr~g~~~~~~---~~~~~~dp~G 197 (251)
T 2phj_A 151 --NEGIPEDTYLNVNIPNLRYEEIKGIKVTRQGKRAYKE---RVFKYIDPYG 197 (251)
T ss_dssp --HHCCCTTEEEEEEEESSCGGGCCEEEECBCCCCSSEE---EEEEEECTTS
T ss_pred --hcCCCCCEEEEecCCCCCccccCCEEEEECccccccc---ceEEEECCCC
Confidence 3468999999999999874 78999999999998763 3445569998
No 2
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=100.00 E-value=8.5e-66 Score=474.89 Aligned_cols=194 Identities=34% Similarity=0.540 Sum_probs=172.7
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEeeCCCCcccccccCCCCceEEEEeeeC-CceeEEecCChHHHHHHH
Q 022032 67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEIN-GATAYEVSGTPVDCVSLA 145 (303)
Q Consensus 67 ~~ILlTNDDGi~SpGI~aL~~aL~~~G~~dV~VVAP~~~qSg~g~siT~~~pl~v~~v~~~-g~~~yaV~GTPaDCV~la 145 (303)
|||||||||||+||||++|+++|++.| +|+||||++||||+||++|+++||++++++.. +...|+|+|||+|||++|
T Consensus 1 M~ILlTNDDGi~apGi~aL~~~l~~~g--~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~~~~~~~~v~GTPaDCV~la 78 (247)
T 1j9j_A 1 MRILVTNDDGIQSKGIIVLAELLSEEH--EVFVVAPDKERSATGHSITIHVPLWMKKVFISERVVAYSTTGTPADCVKLA 78 (247)
T ss_dssp CEEEEECSSCTTCHHHHHHHHHHTTTS--EEEEEEESSCCTTCTTCCCCSSCCCEEECCCSSSEEEEEESSCHHHHHHHH
T ss_pred CeEEEEcCCCCCcHhHHHHHHHHHhCC--CEEEEecCCCCcCCcccccCCCCeEEEEeccCCCCceEEECCcHHHHHHHH
Confidence 789999999999999999999999986 99999999999999999999999999998643 436799999999999999
Q ss_pred HhccccCCCCCcEEEecCCCCCCCccccccchhHHHHHHHHHcCCCeeEEecccCCCCCCCcChHHHHHHHHHHHHHHHH
Q 022032 146 LSGALFSWSKPLLVISGINRGSSCGHHMFYSGVVAGAREALICGVPSLSISLNWKKDESQESDFKDAVSVCLPLINAATR 225 (303)
Q Consensus 146 L~~~l~~~~~PDLVVSGIN~G~N~G~dv~ySGTVgAA~EA~l~GIPAIAvS~~~~~~~~~~~d~~~aa~~~~~li~~l~~ 225 (303)
|++++. .+|||||||||+|.|+|.+++||||||||+||+++||||||||+.+. ...+|+.|++++.+|++++
T Consensus 79 l~~l~~--~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~~~----~~~~~~~aa~~~~~lv~~l-- 150 (247)
T 1j9j_A 79 YNVVMD--KRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISSANY----ESPDFEGAARFLIDFLKEF-- 150 (247)
T ss_dssp HHTTST--TCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEESCS----SSCCHHHHHHHHHHHHHHC--
T ss_pred HHhhcc--CCCCEEEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEecCCC----CCCCHHHHHHHHHHHHHHH--
Confidence 998763 68999999999999999999999999999999999999999999642 1348999999988888775
Q ss_pred HhhcCCCCCCcEEEecCCCCCCCCCceEEEecCCcccCCcccccccccCCCC
Q 022032 226 DIGKGIFPRSCLLNVEIPTSPLTNKGFKFTKQSMWRSTPNWQAVSANRYPAG 277 (303)
Q Consensus 226 ~~~~~~lp~~~~LNVN~P~~~~~~kGvk~Tr~g~~~~~~~~~~~~~~r~p~g 277 (303)
.+..+|++++|||||| ..++||+|+||||+++|.. .+..+.||+|
T Consensus 151 --~~~~lp~~~~lNVN~P--~~~~~g~~~tr~~~~~~~~---~~~~~~dp~g 195 (247)
T 1j9j_A 151 --DFSLLDPFTMLNINVP--AGEIKGWRFTRQSRRRWND---YFEERVSPFG 195 (247)
T ss_dssp --CGGGSCTTCEEEEEEC--SSCCCEEEECBCCCCEEEE---EEEEEECTTS
T ss_pred --HHcCCCcccEEEecCC--ccccCceEEEECCCccccc---ceEEEECCCC
Confidence 4557899999999999 5578999999999998763 3445669998
No 3
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=100.00 E-value=1.6e-65 Score=473.44 Aligned_cols=196 Identities=36% Similarity=0.516 Sum_probs=175.3
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEeeCCCCcccccccCCCCceEEEEeeeCCceeEEecCChHHHHHHHH
Q 022032 67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVSLAL 146 (303)
Q Consensus 67 ~~ILlTNDDGi~SpGI~aL~~aL~~~G~~dV~VVAP~~~qSg~g~siT~~~pl~v~~v~~~g~~~yaV~GTPaDCV~laL 146 (303)
|||||||||||+||||++|+++|++.| +|+||||++||||+||+||+++|+++++++ ....|+|+|||+|||++||
T Consensus 2 p~ILlTNDDGi~apGi~~L~~~l~~~g--~V~VvAP~~~~Sg~g~siT~~~pl~~~~~~--~~~~~~v~GTPaDCV~lal 77 (251)
T 2wqk_A 2 PTFLLVNDDGYFSPGINALREALKSLG--RVVVVAPDRNLSGVGHSLTFTEPLKMRKID--TDFYTVIDGTPADCVHLGY 77 (251)
T ss_dssp CEEEEECSSCTTCHHHHHHHHHHTTTS--EEEEEEESSCCTTSCCSCCCSSCEEEEEEE--TTEEEETTCCHHHHHHHHH
T ss_pred CEEEEEcCCCCCcHHHHHHHHHHHhCC--CEEEEeeCCCCcccccCcCCCCCceeEEee--ccceeecCCChHHHHhhhh
Confidence 789999999999999999999999987 899999999999999999999999999875 3456889999999999999
Q ss_pred hccccCCCCCcEEEecCCCCCCCccccccchhHHHHHHHHHcCCCeeEEecccCCCCCCCcChHHHHHHHHHHHHHHHHH
Q 022032 147 SGALFSWSKPLLVISGINRGSSCGHHMFYSGVVAGAREALICGVPSLSISLNWKKDESQESDFKDAVSVCLPLINAATRD 226 (303)
Q Consensus 147 ~~~l~~~~~PDLVVSGIN~G~N~G~dv~ySGTVgAA~EA~l~GIPAIAvS~~~~~~~~~~~d~~~aa~~~~~li~~l~~~ 226 (303)
+++++ +.+|||||||||+|.|+|.+++||||||||+||+++||||||||+... ...+|+.+++++.++++++++
T Consensus 78 ~~~l~-~~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~~~~----~~~~~~~a~~~~~~ii~~ll~- 151 (251)
T 2wqk_A 78 RVILE-EKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAFGR----ENIMFEEIAKVCVDIVKKVLN- 151 (251)
T ss_dssp HTTTT-TCCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEECS----SSCCHHHHHHHHHHHHHHHHH-
T ss_pred hhhcC-CCCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEcccC----CCcchHHHHHHHHHHHHHHHH-
Confidence 98764 468999999999999999999999999999999999999999999753 246799999999988888753
Q ss_pred hhcCCCCCCcEEEecCCCCCC-CCCceEEEecCCcccCCcccccccccCCCCC
Q 022032 227 IGKGIFPRSCLLNVEIPTSPL-TNKGFKFTKQSMWRSTPNWQAVSANRYPAGH 278 (303)
Q Consensus 227 ~~~~~lp~~~~LNVN~P~~~~-~~kGvk~Tr~g~~~~~~~~~~~~~~r~p~g~ 278 (303)
..+|++++||||||.++. +.+|+|+||||++.|. ..+..+.||+|+
T Consensus 152 ---~~~~~~~~lNVN~P~~~~~~~~g~~~t~~g~~~~~---~~~~~~~dp~g~ 198 (251)
T 2wqk_A 152 ---EGIPEDTYLNVNIPNLRYEEIKGIKVTRQGKRAYK---ERVFKYIDPYGK 198 (251)
T ss_dssp ---HCCCTTEEEEEEEESSCGGGCCEEEECBCCCCSSE---EEEEEEECTTSC
T ss_pred ---hCCccccccccccCCCCccccCceEeeeccccccc---cceeeeeCCCCC
Confidence 468999999999999875 7899999999998876 344556689884
No 4
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=100.00 E-value=9.8e-66 Score=477.63 Aligned_cols=197 Identities=34% Similarity=0.548 Sum_probs=173.8
Q ss_pred CCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEeeCCCCcccccccCCCCceEEEEeeeCCceeEEecCChHHHHH
Q 022032 64 SSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVS 143 (303)
Q Consensus 64 ~~~~~ILlTNDDGi~SpGI~aL~~aL~~~G~~dV~VVAP~~~qSg~g~siT~~~pl~v~~v~~~g~~~yaV~GTPaDCV~ 143 (303)
.++|||||||||||+||||++|+++|++. |+|+||||++||||+||++|+++||++++++ ...|+|+|||+|||+
T Consensus 9 ~~~m~ILlTNDDGi~apGi~aL~~~l~~~--~~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~---~~~~~v~GTPaDCV~ 83 (261)
T 3ty2_A 9 TPKLRLLLSNDDGVYAKGLAILAKTLADL--GEVDVVAPDRNRSGASNSLTLNAPLHIKNLE---NGMISVEGTPTDCVH 83 (261)
T ss_dssp --CCEEEEECSSCTTCHHHHHHHHHHTTT--SEEEEEEESSCCTTCTTCCCCSSCEEEEECT---TSCEEESSCHHHHHH
T ss_pred CCCCeEEEEcCCCCCCHHHHHHHHHHHhc--CCEEEEecCCCCcCcccceecCCCeEEEEec---CCeEEECCCHHHHHH
Confidence 45599999999999999999999999983 6999999999999999999999999999864 346999999999999
Q ss_pred HHHhccccCCCCCcEEEecCCCCCCCccccccchhHHHHHHHHHcCCCeeEEecccCCCCCCCcChHHHHHHHHHHHHHH
Q 022032 144 LALSGALFSWSKPLLVISGINRGSSCGHHMFYSGVVAGAREALICGVPSLSISLNWKKDESQESDFKDAVSVCLPLINAA 223 (303)
Q Consensus 144 laL~~~l~~~~~PDLVVSGIN~G~N~G~dv~ySGTVgAA~EA~l~GIPAIAvS~~~~~~~~~~~d~~~aa~~~~~li~~l 223 (303)
+||++++. .+|||||||||+|.|+|.+++||||||||+||+++||||||||+... ...+|+.|++++.+|++++
T Consensus 84 lal~~l~~--~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~~~----~~~~~~~aa~~~~~lv~~l 157 (261)
T 3ty2_A 84 LAITGVLP--EMPDMVVAGINAGPNLGDDVWYSGTVAAAMEGRFLGLPALAVSLGGE----LFRYYETAAKVVYQLIQRI 157 (261)
T ss_dssp HHTTTTSS--SCCSEEEEEEEESCCCGGGGGTCHHHHHC-CCSTTSCCEEEEEECSS----SCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHhcC--CCCCEEEECCcCCCCCCCCcCCchHHHHHHHHHHcCCCeEEEEcCCC----CccCHHHHHHHHHHHHHHH
Confidence 99998763 58999999999999999999999999999999999999999999743 2357999999999998886
Q ss_pred HHHhhcCCCCCCcEEEecCCCCCC-CCCceEEEecCCcccCCcccccccccCCCCC
Q 022032 224 TRDIGKGIFPRSCLLNVEIPTSPL-TNKGFKFTKQSMWRSTPNWQAVSANRYPAGH 278 (303)
Q Consensus 224 ~~~~~~~~lp~~~~LNVN~P~~~~-~~kGvk~Tr~g~~~~~~~~~~~~~~r~p~g~ 278 (303)
+ +..+|++++||||||.++. ++||+|+||||+++|.+ .+..+.||+|+
T Consensus 158 ~----~~~lp~~~~lNVN~P~~~~~~~kGi~vtr~g~r~~~~---~~~~~~dprG~ 206 (261)
T 3ty2_A 158 E----KDPLPPSTILNINVPDLPYEELKGFEVTRLGTRHRAE---PTIRQIDPRGH 206 (261)
T ss_dssp H----HSCCCTTCEEEEEECSSCGGGCCEEEECBCCCBCSCC---CCEEEECTTSC
T ss_pred H----hcCCCCCeEEEecCCCCCcccCCceEEEECccccccc---ceEEEECCCCC
Confidence 4 4568999999999999875 68999999999998874 34456699983
No 5
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=100.00 E-value=4.2e-65 Score=471.98 Aligned_cols=192 Identities=32% Similarity=0.531 Sum_probs=172.5
Q ss_pred CCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEeeCCCCcccccccCCCCceEEEEeeeCCceeEEec-CChHHHHHH
Q 022032 66 KPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVS-GTPVDCVSL 144 (303)
Q Consensus 66 ~~~ILlTNDDGi~SpGI~aL~~aL~~~G~~dV~VVAP~~~qSg~g~siT~~~pl~v~~v~~~g~~~yaV~-GTPaDCV~l 144 (303)
.|||||||||||+||||++|+++|++.| +|+||||++||||+||++|+++||+++++. ...|+|+ |||+|||++
T Consensus 1 ~M~ILlTNDDGi~apGi~aL~~~L~~~g--~V~VVAP~~~~Sg~g~aiTl~~Pl~~~~~~---~~~~~v~~GTPaDCV~l 75 (254)
T 2v4n_A 1 SMRILLSNDDGVHAPGIQTLAKALREFA--DVQVVAPDRNRSGASNSLTLESSLRTFTFD---NGDIAVQMGTPTDCVYL 75 (254)
T ss_dssp CCEEEEECSSCTTCHHHHHHHHHHTTTS--EEEEEEESSCCTTCTTCCCCSSCCEEEECT---TSCEEEETCCHHHHHHH
T ss_pred CCeEEEEcCCCCCCHHHHHHHHHHHhCC--cEEEEeeCCCCcCccCCcCCCCCeEEEEeC---CCCeEECCCCHHHHHHH
Confidence 3799999999999999999999999875 999999999999999999999999999873 3469999 999999999
Q ss_pred HHhccccCCCCCcEEEecCCCCCCCccccccchhHHHHHHHHHcCCCeeEEecccCCCCCCCcChHHHHHHHHHHHHHHH
Q 022032 145 ALSGALFSWSKPLLVISGINRGSSCGHHMFYSGVVAGAREALICGVPSLSISLNWKKDESQESDFKDAVSVCLPLINAAT 224 (303)
Q Consensus 145 aL~~~l~~~~~PDLVVSGIN~G~N~G~dv~ySGTVgAA~EA~l~GIPAIAvS~~~~~~~~~~~d~~~aa~~~~~li~~l~ 224 (303)
||++++. .+|||||||||+|.|+|.+++||||||||+||+++||||||||+... .+|+.|++++.+|+++++
T Consensus 76 al~~ll~--~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~~~------~~~~~aa~~~~~li~~l~ 147 (254)
T 2v4n_A 76 GVNALMR--PRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGY------QHYDTAAAVTCALLRGLS 147 (254)
T ss_dssp HHHTTSS--SCCSEEEEEEEESCCCGGGGGGCHHHHHHHTTTTSSSCEEEEEESSS------SCHHHHHHHHHHHHHHHH
T ss_pred HHhhccC--CCCCEeeeCCcCCCCCCCCeeccHHHHHHHHHHhcCCCeEEEecCcc------cCHHHHHHHHHHHHHHHH
Confidence 9998763 68999999999999999999999999999999999999999999642 379999999999888864
Q ss_pred HHhhcCCCCCCcEEEecCCCCCC-CCCceEEEecCCcccCCcccccccccCCCC
Q 022032 225 RDIGKGIFPRSCLLNVEIPTSPL-TNKGFKFTKQSMWRSTPNWQAVSANRYPAG 277 (303)
Q Consensus 225 ~~~~~~~lp~~~~LNVN~P~~~~-~~kGvk~Tr~g~~~~~~~~~~~~~~r~p~g 277 (303)
+..+|++++||||||.++. +.||+|+||||+++|.+ .+..+.||||
T Consensus 148 ----~~~lp~~~~lNVN~P~~~~~~~kg~~~tr~g~~~~~~---~~~~~~dp~g 194 (254)
T 2v4n_A 148 ----REPLRTGRILNVNVPDLPLAQVKGIRVTRCGSRHPAD---KVIPQEDPRG 194 (254)
T ss_dssp ----HSCCCSCSEEEEEECSSCGGGCCCEEECBCCEESCCC---CEEEEECTTS
T ss_pred ----HcCCCccceEEecCCCCCcccCCceEEEECCcccccc---ceeEeECCCC
Confidence 4678999999999999874 79999999999988763 3445668998
No 6
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=100.00 E-value=1.7e-64 Score=465.58 Aligned_cols=190 Identities=36% Similarity=0.556 Sum_probs=168.1
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEeeCCCCcccccccCCCCceEEEEeeeC----CceeEEecCChHHHH
Q 022032 67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEIN----GATAYEVSGTPVDCV 142 (303)
Q Consensus 67 ~~ILlTNDDGi~SpGI~aL~~aL~~~G~~dV~VVAP~~~qSg~g~siT~~~pl~v~~v~~~----g~~~yaV~GTPaDCV 142 (303)
|||||||||||+||||++|+++|++.| +|+||||++||||+||++|+++||++++++.. +...|+|+|||+|||
T Consensus 1 M~ILlTNDDGi~apGi~aL~~~l~~~g--~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~~~~~~~~~~~v~GTPaDCV 78 (244)
T 2e6c_A 1 MRILVTNDDGIYSPGLWALAEAASQFG--EVFVAAPDTEQSAAGHAITIAHPVRAYPHPSPLHAPHFPAYRVRGTPADCV 78 (244)
T ss_dssp CEEEEECSSCTTCHHHHHHHHHHTTTS--EEEEEEECSSCCCCCSSCCCSSCBEEEECCCCTTSCCCCEEEEESCHHHHH
T ss_pred CeEEEEcCCCCCcHhHHHHHHHHHhCC--CEEEEecCCCCcCCcccccCCCCeEEEEeccCcCCCCCceEEEcCcHHHHH
Confidence 789999999999999999999999986 99999999999999999999999999998643 335699999999999
Q ss_pred HHHHhccccCCCCCcEEEecCCCCCCCccccccchhHHHHHHHHHcCCCeeEEecccCCCCCCCcChHHHHHHHHHHHHH
Q 022032 143 SLALSGALFSWSKPLLVISGINRGSSCGHHMFYSGVVAGAREALICGVPSLSISLNWKKDESQESDFKDAVSVCLPLINA 222 (303)
Q Consensus 143 ~laL~~~l~~~~~PDLVVSGIN~G~N~G~dv~ySGTVgAA~EA~l~GIPAIAvS~~~~~~~~~~~d~~~aa~~~~~li~~ 222 (303)
++||+ | +.+|||||||||+|.|+|.+++||||||||+||+++||||||||+.... ...+|+.|++++.+|+++
T Consensus 79 ~lal~--l--~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~~~~---~~~~~~~aa~~~~~li~~ 151 (244)
T 2e6c_A 79 ALGLH--L--FGPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSVPLNG---EVPDFAGLRPWLLRTLET 151 (244)
T ss_dssp HHHHH--H--SCSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEECCSS---SCCCHHHHHHHHHHHHHH
T ss_pred HHHHc--C--CCCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEeccCCC---CCCCHHHHHHHHHHHHHH
Confidence 99999 4 3689999999999999999999999999999999999999999996321 124799999999999888
Q ss_pred HHHHhhcCCCCCCcEEEecCCCCCCCCCceEEEecCCcccCCcccccccccCCCC
Q 022032 223 ATRDIGKGIFPRSCLLNVEIPTSPLTNKGFKFTKQSMWRSTPNWQAVSANRYPAG 277 (303)
Q Consensus 223 l~~~~~~~~lp~~~~LNVN~P~~~~~~kGvk~Tr~g~~~~~~~~~~~~~~r~p~g 277 (303)
++ +. |++++|||||| .++||+|+||||+++|... +..+.||+|
T Consensus 152 l~----~~--p~~~~lNVN~P---~~~~g~~~tr~g~~~~~~~---~~~~~dp~g 194 (244)
T 2e6c_A 152 LL----RL--ERPFLVNVNLP---LRPKGFLWTRQSVRAYEGV---VIPGEDPMG 194 (244)
T ss_dssp HT----TS--CSSCEEEEECC---SSCCEEEECBCCCCCEECC---EEEEECTTS
T ss_pred HH----hC--CcCcEEEeeCC---CccCCeEEEECCCCccccc---eEEEECCCC
Confidence 64 33 88999999999 5589999999999987643 344568888
No 7
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=100.00 E-value=1.6e-64 Score=473.80 Aligned_cols=199 Identities=29% Similarity=0.386 Sum_probs=174.2
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEeeCCCCcccccccCCCCceEEEEeeeCCceeEEecCChHHHHHHHH
Q 022032 67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVSLAL 146 (303)
Q Consensus 67 ~~ILlTNDDGi~SpGI~aL~~aL~~~G~~dV~VVAP~~~qSg~g~siT~~~pl~v~~v~~~g~~~yaV~GTPaDCV~laL 146 (303)
|||||||||||+||||++|+++|++.| +|+||||++||||+||++|+++||++++++..+...|+|+|||+|||++||
T Consensus 1 M~ILlTNDDGi~ApGi~aL~~aL~~~g--~V~VVAP~~~qSg~g~siTl~~pl~~~~~~~~~~~~~~v~GTPaDCV~lal 78 (280)
T 1l5x_A 1 MKILVTNDDGVHSPGLRLLYQFALSLG--DVDVVAPESPKSATGLGITLHKPLRMYEVDLCGFRAIATSGTPSDTVYLAT 78 (280)
T ss_dssp CEEEEECSSCTTCHHHHHHHHHHGGGS--EEEEEEESSCTTTSCSSCCCSSCBCEEEEECSSSEEEEESSCHHHHHHHHH
T ss_pred CeEEEEcCCCCCcHhHHHHHHHHHhCC--CEEEEecCCCCcCCcccccCCCCeEEEEeccCCCceEEECCcHHHHHHHHH
Confidence 789999999999999999999999987 999999999999999999999999999987555567999999999999999
Q ss_pred hccccCCCCCcEEEecCCCCCCCccc-cccchhHHHHHHHHHcCCCeeEEecccCCCCCC---CcChHHHHHHHHHHHHH
Q 022032 147 SGALFSWSKPLLVISGINRGSSCGHH-MFYSGVVAGAREALICGVPSLSISLNWKKDESQ---ESDFKDAVSVCLPLINA 222 (303)
Q Consensus 147 ~~~l~~~~~PDLVVSGIN~G~N~G~d-v~ySGTVgAA~EA~l~GIPAIAvS~~~~~~~~~---~~d~~~aa~~~~~li~~ 222 (303)
+++ . .+|||||||||+|.|+|.+ ++||||||||+||+++||||||||+.+...... ..+|+.|++++.+|+++
T Consensus 79 ~~l-~--~~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~Ea~~~GiPaIA~S~~~~~~~~~~~~~~~~~~aa~~~~~lv~~ 155 (280)
T 1l5x_A 79 FGL-G--RKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSAYLENWNELLNNKEAVEIMGAVVSSTASY 155 (280)
T ss_dssp HHH-T--SCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEECCSCHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred hcC-C--CCCCEEEECCccCCcCCccccccchhHHHHHHHHHcCCCeEEEEccccCCCcccccccCHHHHHHHHHHHHHH
Confidence 986 3 6899999999999999999 999999999999999999999999974211100 13799999999999888
Q ss_pred HHHHhhcCCCCCCc-EEEecCCCCCC-CCCceEEEecCCcccCCcccccccccCCCCC
Q 022032 223 ATRDIGKGIFPRSC-LLNVEIPTSPL-TNKGFKFTKQSMWRSTPNWQAVSANRYPAGH 278 (303)
Q Consensus 223 l~~~~~~~~lp~~~-~LNVN~P~~~~-~~kGvk~Tr~g~~~~~~~~~~~~~~r~p~g~ 278 (303)
+++ ..+|+++ +||||||.++. ++| +|+||||+++|... +..+.||+|.
T Consensus 156 l~~----~~lp~~~d~LNVN~P~~~~~~~k-~~~tr~g~~~~~~~---~~~~~dprg~ 205 (280)
T 1l5x_A 156 VLK----NGMPQGVDVISVNFPRRLGRGVR-AKLVKAAKLRYAQQ---VVERVDPRGV 205 (280)
T ss_dssp HHH----HCSCTTCSEEEEEECSCCCTTCC-EEECBCCSCSBCSC---CEEEECTTSC
T ss_pred HHh----cCCCCCCceEEecCCCCCCCCce-EEEEECCCcccccc---eEEEECCCCC
Confidence 753 4689999 99999999875 688 99999999987643 3445688883
No 8
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=96.27 E-value=0.011 Score=54.61 Aligned_cols=41 Identities=17% Similarity=0.254 Sum_probs=28.8
Q ss_pred CCCCCCCeEEEecCCCC-CCccHHHHHHHHHhcCCCcEEEEee
Q 022032 61 NVDSSKPVLLVTNGDGI-ESPGLVYLVEALVREGLYNVHVCAP 102 (303)
Q Consensus 61 ~~~~~~~~ILlTNDDGi-~SpGI~aL~~aL~~~G~~dV~VVAP 102 (303)
+.+...||||++...|. +--....|+++|++.| |+|+|++|
T Consensus 15 ~~~~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~G-heV~v~~~ 56 (398)
T 3oti_A 15 HIEGRHMRVLFVSSPGIGHLFPLIQLAWGFRTAG-HDVLIAVA 56 (398)
T ss_dssp ----CCCEEEEECCSSHHHHGGGHHHHHHHHHTT-CEEEEEES
T ss_pred chhhhcCEEEEEcCCCcchHhHHHHHHHHHHHCC-CEEEEecc
Confidence 44556689999876432 2223578999999999 79999998
No 9
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=95.60 E-value=0.034 Score=51.19 Aligned_cols=41 Identities=32% Similarity=0.188 Sum_probs=28.2
Q ss_pred CCCCCeEEEecCCCC-CCccHHHHHHHHHhcCCCcEEEEeeCC
Q 022032 63 DSSKPVLLVTNGDGI-ESPGLVYLVEALVREGLYNVHVCAPQS 104 (303)
Q Consensus 63 ~~~~~~ILlTNDDGi-~SpGI~aL~~aL~~~G~~dV~VVAP~~ 104 (303)
...+||||++..-+. +--.+..|+++|++.| |+|+|+++..
T Consensus 12 ~~~~MrIl~~~~~~~gh~~~~~~La~~L~~~G-heV~v~~~~~ 53 (398)
T 4fzr_A 12 RGSHMRILVIAGCSEGFVMPLVPLSWALRAAG-HEVLVAASEN 53 (398)
T ss_dssp ---CCEEEEECCSSHHHHGGGHHHHHHHHHTT-CEEEEEEEGG
T ss_pred CCCceEEEEEcCCCcchHHHHHHHHHHHHHCC-CEEEEEcCHH
Confidence 456689998865321 1123578999999999 7999999843
No 10
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=95.26 E-value=0.053 Score=49.45 Aligned_cols=44 Identities=23% Similarity=0.083 Sum_probs=29.1
Q ss_pred CCCCCCCCCCeEEEecCCCCCCcc----HHHHHHHHHhcCCCcEEEEeeCCC
Q 022032 58 STENVDSSKPVLLVTNGDGIESPG----LVYLVEALVREGLYNVHVCAPQSD 105 (303)
Q Consensus 58 ~~~~~~~~~~~ILlTNDDGi~SpG----I~aL~~aL~~~G~~dV~VVAP~~~ 105 (303)
++++.-.+.||||++. +-+.| +.+|+++|.+.| |+|+++.+..-
T Consensus 14 g~~~~~~~~MRIL~~~---~p~~GHv~P~l~LA~~L~~rG-h~Vt~~t~~~~ 61 (400)
T 4amg_A 14 GTENLYFQSMRALFIT---SPGLSHILPTVPLAQALRALG-HEVRYATGGDI 61 (400)
T ss_dssp -------CCCEEEEEC---CSSHHHHGGGHHHHHHHHHTT-CEEEEEECSST
T ss_pred CcccCCCCCCeEEEEC---CCchhHHHHHHHHHHHHHHCC-CEEEEEeCcch
Confidence 3445566789999985 22333 568999999999 79999988654
No 11
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=94.85 E-value=0.082 Score=48.23 Aligned_cols=37 Identities=27% Similarity=0.152 Sum_probs=27.0
Q ss_pred CCeEEEecCCCC-CCccHHHHHHHHHhcCCCcEEEEeeC
Q 022032 66 KPVLLVTNGDGI-ESPGLVYLVEALVREGLYNVHVCAPQ 103 (303)
Q Consensus 66 ~~~ILlTNDDGi-~SpGI~aL~~aL~~~G~~dV~VVAP~ 103 (303)
+||||++-.-+. +--.+..|+++|++.| |+|.|+++.
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~G-heV~v~~~~ 38 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASG-HEVLIAAPP 38 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTT-CEEEEEECH
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCC-CEEEEecCh
Confidence 488987765321 2223578999999999 799999874
No 12
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=94.62 E-value=0.092 Score=48.32 Aligned_cols=45 Identities=20% Similarity=0.117 Sum_probs=28.6
Q ss_pred CCCCCCCCCeEEEecCCCC-CCccHHHHHHHHHhcCCCcEEEEeeCC
Q 022032 59 TENVDSSKPVLLVTNGDGI-ESPGLVYLVEALVREGLYNVHVCAPQS 104 (303)
Q Consensus 59 ~~~~~~~~~~ILlTNDDGi-~SpGI~aL~~aL~~~G~~dV~VVAP~~ 104 (303)
+++.....||||++.--|. +---...|+++|++.| |+|+++.+..
T Consensus 13 ~~~~~~~m~rIl~~~~~~~GHv~p~l~La~~L~~~G-h~V~v~~~~~ 58 (415)
T 3rsc_A 13 GHIEGRHMAHLLIVNVASHGLILPTLTVVTELVRRG-HRVSYVTAGG 58 (415)
T ss_dssp ------CCCEEEEECCSCHHHHGGGHHHHHHHHHTT-CEEEEEECGG
T ss_pred CCcCcccCCEEEEEeCCCccccccHHHHHHHHHHCC-CEEEEEeCHH
Confidence 4455566789999874321 1112578999999999 7999999654
No 13
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=94.59 E-value=0.053 Score=49.63 Aligned_cols=41 Identities=15% Similarity=0.118 Sum_probs=28.3
Q ss_pred CCCCCCeEEEecCCCC-CCccHHHHHHHHHhcCCCcEEEEeeC
Q 022032 62 VDSSKPVLLVTNGDGI-ESPGLVYLVEALVREGLYNVHVCAPQ 103 (303)
Q Consensus 62 ~~~~~~~ILlTNDDGi-~SpGI~aL~~aL~~~G~~dV~VVAP~ 103 (303)
....+||||++.-.+. +.-.+..|+++|++.| |+|+|+.+.
T Consensus 16 ~~~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~G-heV~v~~~~ 57 (412)
T 3otg_A 16 IEGRHMRVLFASLGTHGHTYPLLPLATAARAAG-HEVTFATGE 57 (412)
T ss_dssp --CCSCEEEEECCSSHHHHGGGHHHHHHHHHTT-CEEEEEECG
T ss_pred cccceeEEEEEcCCCcccHHHHHHHHHHHHHCC-CEEEEEccH
Confidence 3456789998872211 1112458999999999 799999875
No 14
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=94.20 E-value=0.5 Score=42.79 Aligned_cols=41 Identities=22% Similarity=0.218 Sum_probs=31.0
Q ss_pred CCCeEEEecCCCCC--Cc----cHHHHHHHHHhcCCCcEEEEeeCCCC
Q 022032 65 SKPVLLVTNGDGIE--SP----GLVYLVEALVREGLYNVHVCAPQSDK 106 (303)
Q Consensus 65 ~~~~ILlTNDDGi~--Sp----GI~aL~~aL~~~G~~dV~VVAP~~~q 106 (303)
++||||+..+.-.- .- -+..|+++|.+.| |+|+|++|....
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G-~~V~v~~~~~~~ 47 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLG-HEVLVFTPSHGR 47 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTT-CEEEEEEECTTC
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCC-CeEEEEecCCCC
Confidence 36899998765332 12 2678999999999 899999987654
No 15
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=93.80 E-value=0.055 Score=50.62 Aligned_cols=37 Identities=24% Similarity=0.359 Sum_probs=26.9
Q ss_pred CeEEEecCCCC-CCccHHHHHHHHHhcCCCcEEEEeeCC
Q 022032 67 PVLLVTNGDGI-ESPGLVYLVEALVREGLYNVHVCAPQS 104 (303)
Q Consensus 67 ~~ILlTNDDGi-~SpGI~aL~~aL~~~G~~dV~VVAP~~ 104 (303)
||||++-+... +...+.+|+++|++.| |+|+|++|..
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~G-h~V~v~~~~~ 38 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELG-ADARMCLPPD 38 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTT-CCEEEEECGG
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCC-CeEEEEeCHH
Confidence 67888765321 2234788999999999 7999999864
No 16
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=93.79 E-value=0.13 Score=46.68 Aligned_cols=36 Identities=22% Similarity=0.229 Sum_probs=26.5
Q ss_pred CeEEEecCCCC-CCccHHHHHHHHHhcCCCcEEEEeeC
Q 022032 67 PVLLVTNGDGI-ESPGLVYLVEALVREGLYNVHVCAPQ 103 (303)
Q Consensus 67 ~~ILlTNDDGi-~SpGI~aL~~aL~~~G~~dV~VVAP~ 103 (303)
+|||++.--|. +.--+..|+++|++.| |+|+++++.
T Consensus 5 ~~il~~~~~~~Ghv~~~~~La~~L~~~G-heV~v~~~~ 41 (402)
T 3ia7_A 5 RHILFANVQGHGHVYPSLGLVSELARRG-HRITYVTTP 41 (402)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTT-CEEEEEECH
T ss_pred CEEEEEeCCCCcccccHHHHHHHHHhCC-CEEEEEcCH
Confidence 48988764322 2223678999999999 799999974
No 17
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=93.01 E-value=0.46 Score=44.02 Aligned_cols=38 Identities=21% Similarity=0.207 Sum_probs=29.5
Q ss_pred CCCeEEEecCCCCCCcc----HHHHHHHHHhcCCCcEEEEeeCCCC
Q 022032 65 SKPVLLVTNGDGIESPG----LVYLVEALVREGLYNVHVCAPQSDK 106 (303)
Q Consensus 65 ~~~~ILlTNDDGi~SpG----I~aL~~aL~~~G~~dV~VVAP~~~q 106 (303)
..||||+.. +.+.| +..|+++|.+.| |+|+++++....
T Consensus 11 ~~~~Il~~~---~~~~GHv~p~l~la~~L~~~G-h~V~~~~~~~~~ 52 (424)
T 2iya_A 11 TPRHISFFN---IPGHGHVNPSLGIVQELVARG-HRVSYAITDEFA 52 (424)
T ss_dssp CCCEEEEEC---CSCHHHHHHHHHHHHHHHHTT-CEEEEEECGGGH
T ss_pred ccceEEEEe---CCCCcccchHHHHHHHHHHCC-CeEEEEeCHHHH
Confidence 357899983 33445 578999999999 799999987653
No 18
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=90.34 E-value=0.72 Score=42.56 Aligned_cols=36 Identities=17% Similarity=0.182 Sum_probs=27.3
Q ss_pred CCeEEEecCCCCCCcc----HHHHHHHHHhcCCCcEEEEeeCCC
Q 022032 66 KPVLLVTNGDGIESPG----LVYLVEALVREGLYNVHVCAPQSD 105 (303)
Q Consensus 66 ~~~ILlTNDDGi~SpG----I~aL~~aL~~~G~~dV~VVAP~~~ 105 (303)
.|+||+..- .+.| +..|+++|.+.| |+|+++.+...
T Consensus 7 m~kIl~~~~---~~~Gh~~p~~~la~~L~~~G-~~V~~~~~~~~ 46 (430)
T 2iyf_A 7 PAHIAMFSI---AAHGHVNPSLEVIRELVARG-HRVTYAIPPVF 46 (430)
T ss_dssp -CEEEEECC---SCHHHHGGGHHHHHHHHHTT-CEEEEEECGGG
T ss_pred cceEEEEeC---CCCccccchHHHHHHHHHCC-CeEEEEeCHHH
Confidence 478998753 2334 578999999999 79999998764
No 19
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=78.30 E-value=1.4 Score=39.10 Aligned_cols=41 Identities=15% Similarity=0.114 Sum_probs=29.8
Q ss_pred CCCeEEEecCC---------------CC--CCccHHHHHHHHHhcCCCcEEEEeeCCCC
Q 022032 65 SKPVLLVTNGD---------------GI--ESPGLVYLVEALVREGLYNVHVCAPQSDK 106 (303)
Q Consensus 65 ~~~~ILlTNDD---------------Gi--~SpGI~aL~~aL~~~G~~dV~VVAP~~~q 106 (303)
++||||+.+.. .. ...-+..|+++|.+.| |+|+|+.+....
T Consensus 2 ~~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G-~~v~v~~~~~~~ 59 (342)
T 2iuy_A 2 RPLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELG-HEVFLLGAPGSP 59 (342)
T ss_dssp -CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTT-CEEEEESCTTSC
T ss_pred CccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcC-CeEEEEecCCCC
Confidence 35889998876 11 1123577899999998 799999987644
No 20
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=70.33 E-value=1.5 Score=39.35 Aligned_cols=43 Identities=9% Similarity=0.242 Sum_probs=32.3
Q ss_pred CCCCCeEEEecC----------CCCCCccHHHHHHHHHhcCCCcEEEEeeCCCC
Q 022032 63 DSSKPVLLVTNG----------DGIESPGLVYLVEALVREGLYNVHVCAPQSDK 106 (303)
Q Consensus 63 ~~~~~~ILlTND----------DGi~SpGI~aL~~aL~~~G~~dV~VVAP~~~q 106 (303)
.+++.-|+|||- +|++..=+..-++.|++.| ++|.++.|....
T Consensus 2 ~m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG-~~V~iaS~~g~~ 54 (244)
T 3kkl_A 2 TPKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHG-FEVDFVSETGGF 54 (244)
T ss_dssp -CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTT-CEEEEEESSSCC
T ss_pred CCCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCC-CEEEEEeCCCCC
Confidence 345566888872 4666666778899999999 799999997554
No 21
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=67.77 E-value=3.4 Score=38.85 Aligned_cols=40 Identities=18% Similarity=0.101 Sum_probs=30.3
Q ss_pred CCCeEEEecCCCCC------------Ccc----HHHHHHHHHhcCCCcEEEEeeCCC
Q 022032 65 SKPVLLVTNGDGIE------------SPG----LVYLVEALVREGLYNVHVCAPQSD 105 (303)
Q Consensus 65 ~~~~ILlTNDDGi~------------SpG----I~aL~~aL~~~G~~dV~VVAP~~~ 105 (303)
++||||+.++..+- .-| +..|++.|.+.| |+|+|+++...
T Consensus 6 ~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G-~~V~v~~~~~~ 61 (499)
T 2r60_A 6 RIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMG-VQVDIITRRIK 61 (499)
T ss_dssp -CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTT-CEEEEEEECCC
T ss_pred ccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcC-CeEEEEeCCCC
Confidence 35899999987532 122 577999999999 79999998654
No 22
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=65.99 E-value=5.1 Score=37.36 Aligned_cols=37 Identities=27% Similarity=0.283 Sum_probs=28.1
Q ss_pred CCCCeEEEecCCCCCCcc----HHHHHHHHHhcCCCcEEEEeeCC
Q 022032 64 SSKPVLLVTNGDGIESPG----LVYLVEALVREGLYNVHVCAPQS 104 (303)
Q Consensus 64 ~~~~~ILlTNDDGi~SpG----I~aL~~aL~~~G~~dV~VVAP~~ 104 (303)
...||||++ +..+.| +.+|+++|++.| |+|+++.+..
T Consensus 18 ~~~mrIl~~---~~~~~GHv~p~l~la~~L~~~G-heV~~~~~~~ 58 (441)
T 2yjn_A 18 GSHMRVVFS---SMASKSHLFGLVPLAWAFRAAG-HEVRVVASPA 58 (441)
T ss_dssp -CCCEEEEE---CCSCHHHHTTTHHHHHHHHHTT-CEEEEEECGG
T ss_pred CCccEEEEE---cCCCcchHhHHHHHHHHHHHCC-CeEEEEeCch
Confidence 345899999 333333 568999999999 7999999865
No 23
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=65.50 E-value=6.2 Score=38.86 Aligned_cols=45 Identities=20% Similarity=0.264 Sum_probs=28.9
Q ss_pred CCCCCCCCeEEEecCC-C--CCCcc----HHHHHHHHHhcCCCcEEEEeeCCC
Q 022032 60 ENVDSSKPVLLVTNGD-G--IESPG----LVYLVEALVREGLYNVHVCAPQSD 105 (303)
Q Consensus 60 ~~~~~~~~~ILlTNDD-G--i~SpG----I~aL~~aL~~~G~~dV~VVAP~~~ 105 (303)
++.+..+||||..--- - +.+=| +.+|.++|.+.| |+|.|+.|.-.
T Consensus 3 ~~~~~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G-~~V~Vi~P~Y~ 54 (536)
T 3vue_A 3 HHHHHHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANG-HRVMVISPRYD 54 (536)
T ss_dssp -----CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTT-CEEEEEEECCS
T ss_pred cccCCCCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcC-CeEEEEecCch
Confidence 3445678999977321 0 01124 368999999999 79999999764
No 24
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=62.82 E-value=9.5 Score=34.04 Aligned_cols=42 Identities=24% Similarity=0.216 Sum_probs=30.0
Q ss_pred CCCeEEEecCCCCCC-----ccHHHHHHHHHhcCCCcEEEEeeCCCCc
Q 022032 65 SKPVLLVTNGDGIES-----PGLVYLVEALVREGLYNVHVCAPQSDKS 107 (303)
Q Consensus 65 ~~~~ILlTNDDGi~S-----pGI~aL~~aL~~~G~~dV~VVAP~~~qS 107 (303)
++|+||+..+.-... .-+..|+++|.+.| |+|+|+.+.....
T Consensus 19 ~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G-~~V~v~~~~~~~~ 65 (406)
T 2gek_A 19 SHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAG-HEVSVLAPASPHV 65 (406)
T ss_dssp --CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTT-CEEEEEESCCTTS
T ss_pred CcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCC-CeEEEEecCCccc
Confidence 568899988643222 23667999999999 7999999886543
No 25
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=61.05 E-value=6.3 Score=31.53 Aligned_cols=86 Identities=13% Similarity=0.083 Sum_probs=54.2
Q ss_pred CCCCCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEeeCCCCcccccccCCCCceEEEEeeeCCceeEEecCChHH
Q 022032 61 NVDSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVD 140 (303)
Q Consensus 61 ~~~~~~~~ILlTNDDGi~SpGI~aL~~aL~~~G~~dV~VVAP~~~qSg~g~siT~~~pl~v~~v~~~g~~~yaV~GTPaD 140 (303)
+|..+++||||.-||-..... |.+.|.+.| |+|+- +-.+..+
T Consensus 3 ~m~~r~~rILiVdD~~~~~~~---l~~~L~~~G-~~v~~----------------------------------~a~~g~e 44 (123)
T 2lpm_A 3 HMTERRLRVLVVEDESMIAML---IEDTLCELG-HEVAA----------------------------------TASRMQE 44 (123)
T ss_dssp CCCCCCCCEEEESSSTTTSHH---HHHHHHHHC-CCCCB----------------------------------CSCCHHH
T ss_pred CCCCCCCEEEEEeCCHHHHHH---HHHHHHHCC-CEEEE----------------------------------EECCHHH
Confidence 677889999999998665544 445566777 33310 1122333
Q ss_pred HHHHHHhccccCCCCCcEEEecCCCCCCCccccccchhHHHHHHHHHcCCCeeEEecc
Q 022032 141 CVSLALSGALFSWSKPLLVISGINRGSSCGHHMFYSGVVAGAREALICGVPSLSISLN 198 (303)
Q Consensus 141 CV~laL~~~l~~~~~PDLVVSGIN~G~N~G~dv~ySGTVgAA~EA~l~GIPAIAvS~~ 198 (303)
++.+.- ..+|||||.=++...-.|.++ +.+-...++|.|.+|..
T Consensus 45 Al~~~~------~~~~DlvllDi~mP~~~G~el--------~~~lr~~~ipvI~lTa~ 88 (123)
T 2lpm_A 45 ALDIAR------KGQFDIAIIDVNLDGEPSYPV--------ADILAERNVPFIFATGY 88 (123)
T ss_dssp HHHHHH------HCCSSEEEECSSSSSCCSHHH--------HHHHHHTCCSSCCBCTT
T ss_pred HHHHHH------hCCCCEEEEecCCCCCCHHHH--------HHHHHcCCCCEEEEecC
Confidence 333221 147999999999976666543 22222368999999864
No 26
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=61.04 E-value=4.7 Score=37.61 Aligned_cols=37 Identities=19% Similarity=0.127 Sum_probs=28.1
Q ss_pred CeEEEecCCCCC---Ccc----HHHHHHHHHhcCCCcEEEEeeCC
Q 022032 67 PVLLVTNGDGIE---SPG----LVYLVEALVREGLYNVHVCAPQS 104 (303)
Q Consensus 67 ~~ILlTNDDGi~---SpG----I~aL~~aL~~~G~~dV~VVAP~~ 104 (303)
||||+..+.-.- .-| +..|+++|.+.| |+|+|++|..
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G-~~V~vi~~~~ 44 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHG-VRTRTLIPGY 44 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTT-CEEEEEEECC
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcC-CeEEEEeccc
Confidence 689988875431 223 577899999999 7999999964
No 27
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=61.02 E-value=7 Score=34.63 Aligned_cols=35 Identities=20% Similarity=0.333 Sum_probs=26.2
Q ss_pred CCeEEEecCCCCCCccH----HHHHHHHHhcCCCcEEEEeeCC
Q 022032 66 KPVLLVTNGDGIESPGL----VYLVEALVREGLYNVHVCAPQS 104 (303)
Q Consensus 66 ~~~ILlTNDDGi~SpGI----~aL~~aL~~~G~~dV~VVAP~~ 104 (303)
.||||+.. .|. -|. ..|+++|.+.| |+|+|+.+..
T Consensus 6 ~mkIl~~~-~~~--gG~~~~~~~la~~L~~~G-~~V~v~~~~~ 44 (364)
T 1f0k_A 6 GKRLMVMA-GGT--GGHVFPGLAVAHHLMAQG-WQVRWLGTAD 44 (364)
T ss_dssp -CEEEEEC-CSS--HHHHHHHHHHHHHHHTTT-CEEEEEECTT
T ss_pred CcEEEEEe-CCC--ccchhHHHHHHHHHHHcC-CEEEEEecCC
Confidence 38999887 233 243 27999999999 7999999875
No 28
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=60.84 E-value=7.1 Score=35.54 Aligned_cols=41 Identities=15% Similarity=0.212 Sum_probs=30.1
Q ss_pred CCCCeEEEecCCCCC--------Ccc----HHHHHHHHHhcCCCcEEEEeeCCC
Q 022032 64 SSKPVLLVTNGDGIE--------SPG----LVYLVEALVREGLYNVHVCAPQSD 105 (303)
Q Consensus 64 ~~~~~ILlTNDDGi~--------SpG----I~aL~~aL~~~G~~dV~VVAP~~~ 105 (303)
...||||+..++-.- .-| +..|+++|.+.| |+|+|+++...
T Consensus 18 ~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G-~~V~v~~~~~~ 70 (438)
T 3c48_A 18 GSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQG-IEVDIYTRATR 70 (438)
T ss_dssp -CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTT-CEEEEEEECCC
T ss_pred cchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcC-CEEEEEecCCC
Confidence 455889999986432 123 578999999999 79999998753
No 29
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=60.75 E-value=8.6 Score=35.39 Aligned_cols=31 Identities=26% Similarity=0.447 Sum_probs=22.5
Q ss_pred CeEEEecCCCCCCcc----HHHHHHHHHhcCCCcEEEEe
Q 022032 67 PVLLVTNGDGIESPG----LVYLVEALVREGLYNVHVCA 101 (303)
Q Consensus 67 ~~ILlTNDDGi~SpG----I~aL~~aL~~~G~~dV~VVA 101 (303)
.||||+-- | +-| -.+|+++|++.| |+|+.+.
T Consensus 3 ~~i~i~~G-G--TgGHi~palala~~L~~~g-~~V~~vg 37 (365)
T 3s2u_A 3 GNVLIMAG-G--TGGHVFPALACAREFQARG-YAVHWLG 37 (365)
T ss_dssp CEEEEECC-S--SHHHHHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CcEEEEcC-C--CHHHHHHHHHHHHHHHhCC-CEEEEEE
Confidence 57999842 2 223 357999999999 7998775
No 30
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=59.51 E-value=5.2 Score=37.30 Aligned_cols=37 Identities=19% Similarity=0.232 Sum_probs=27.7
Q ss_pred CeEEEecCCCC---CCcc----HHHHHHHHHhcCCCcEEEEeeCC
Q 022032 67 PVLLVTNGDGI---ESPG----LVYLVEALVREGLYNVHVCAPQS 104 (303)
Q Consensus 67 ~~ILlTNDDGi---~SpG----I~aL~~aL~~~G~~dV~VVAP~~ 104 (303)
||||+..+.-. ..-| +..|+++|.+.| |+|+|++|..
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G-~~V~vi~~~~ 44 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADG-VDARVLLPAF 44 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTT-CEEEEEEECC
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcC-CEEEEEecCc
Confidence 68888877532 1223 567999999999 7999999964
No 31
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=59.38 E-value=7 Score=34.49 Aligned_cols=37 Identities=11% Similarity=0.093 Sum_probs=27.0
Q ss_pred CeEEEecCCCCCCcc----HHHHHHHHHhcCCCcEEEEeeCC
Q 022032 67 PVLLVTNGDGIESPG----LVYLVEALVREGLYNVHVCAPQS 104 (303)
Q Consensus 67 ~~ILlTNDDGi~SpG----I~aL~~aL~~~G~~dV~VVAP~~ 104 (303)
||||+..+.-...-| +..|+++|.+.| |+|+|+.+..
T Consensus 1 MkIl~i~~~~~~~gG~~~~~~~l~~~L~~~G-~~V~v~~~~~ 41 (374)
T 2iw1_A 1 MIVAFCLYKYFPFGGLQRDFMRIASTVAARG-HHVRVYTQSW 41 (374)
T ss_dssp -CEEEECSEECTTCHHHHHHHHHHHHHHHTT-CCEEEEESEE
T ss_pred CeEEEEEeecCCCcchhhHHHHHHHHHHhCC-CeEEEEecCC
Confidence 678877665322223 678999999999 7999999864
No 32
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=59.17 E-value=8.2 Score=34.58 Aligned_cols=41 Identities=22% Similarity=0.330 Sum_probs=31.5
Q ss_pred CCCeEEEecC------C----CCCCccHHHHHHHHHhcCCCcEEEEeeCCCC
Q 022032 65 SKPVLLVTNG------D----GIESPGLVYLVEALVREGLYNVHVCAPQSDK 106 (303)
Q Consensus 65 ~~~~ILlTND------D----Gi~SpGI~aL~~aL~~~G~~dV~VVAP~~~q 106 (303)
++.-|+|||- | |++-.=+..-++.|++.| ++|.++.|...+
T Consensus 10 kkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG-~~V~~aSp~g~~ 60 (247)
T 3n7t_A 10 RKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAG-FEVDVASETGTF 60 (247)
T ss_dssp SEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTT-CEEEEEESSSCC
T ss_pred CeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCC-CEEEEEeCCCCc
Confidence 4455778982 2 666666788899999999 799999997654
No 33
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=57.12 E-value=19 Score=30.25 Aligned_cols=40 Identities=18% Similarity=0.180 Sum_probs=32.6
Q ss_pred CCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEeeCCCC
Q 022032 66 KPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDK 106 (303)
Q Consensus 66 ~~~ILlTNDDGi~SpGI~aL~~aL~~~G~~dV~VVAP~~~q 106 (303)
.++|+|-=-||++...+...++.|++.| ++|.+++|....
T Consensus 23 ~~kV~ill~~g~~~~e~~~~~~~l~~ag-~~v~~vs~~~~~ 62 (193)
T 1oi4_A 23 SKKIAVLITDEFEDSEFTSPADEFRKAG-HEVITIEKQAGK 62 (193)
T ss_dssp CCEEEEECCTTBCTHHHHHHHHHHHHTT-CEEEEEESSTTC
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHCC-CEEEEEECCCCc
Confidence 3455555558999999999999999998 699999998743
No 34
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=56.87 E-value=15 Score=31.82 Aligned_cols=33 Identities=21% Similarity=0.292 Sum_probs=25.3
Q ss_pred CCeEEEecCCCCCCccH--HHHHHHHHhcCCCcEEEEeeCCC
Q 022032 66 KPVLLVTNGDGIESPGL--VYLVEALVREGLYNVHVCAPQSD 105 (303)
Q Consensus 66 ~~~ILlTNDDGi~SpGI--~aL~~aL~~~G~~dV~VVAP~~~ 105 (303)
.|+|||| | + |. +.|++.|.+.| ++|+++.-..+
T Consensus 3 ~~~ilVt---G--a-G~iG~~l~~~L~~~g-~~V~~~~r~~~ 37 (286)
T 3gpi_A 3 LSKILIA---G--C-GDLGLELARRLTAQG-HEVTGLRRSAQ 37 (286)
T ss_dssp CCCEEEE---C--C-SHHHHHHHHHHHHTT-CCEEEEECTTS
T ss_pred CCcEEEE---C--C-CHHHHHHHHHHHHCC-CEEEEEeCCcc
Confidence 4689999 6 3 43 57889999998 79999876543
No 35
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=56.13 E-value=83 Score=25.81 Aligned_cols=105 Identities=14% Similarity=0.081 Sum_probs=59.8
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEeeCCCCcccccccCCCCceEEEEeeeCCceeEEecCCh-HHHHHHH
Q 022032 67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTP-VDCVSLA 145 (303)
Q Consensus 67 ~~ILlTNDDGi~SpGI~aL~~aL~~~G~~dV~VVAP~~~qSg~g~siT~~~pl~v~~v~~~g~~~yaV~GTP-aDCV~la 145 (303)
|+||||=--|. -| ++|++.|.+.| ++|+++.-..++-. ... +.+.+..|=+= .+.+
T Consensus 1 M~ilItGatG~--iG-~~l~~~L~~~g-~~V~~~~R~~~~~~------~~~----------~~~~~~~D~~d~~~~~--- 57 (219)
T 3dqp_A 1 MKIFIVGSTGR--VG-KSLLKSLSTTD-YQIYAGARKVEQVP------QYN----------NVKAVHFDVDWTPEEM--- 57 (219)
T ss_dssp CEEEEESTTSH--HH-HHHHHHHTTSS-CEEEEEESSGGGSC------CCT----------TEEEEECCTTSCHHHH---
T ss_pred CeEEEECCCCH--HH-HHHHHHHHHCC-CEEEEEECCccchh------hcC----------CceEEEecccCCHHHH---
Confidence 67999933332 23 67889999988 78888864332110 001 12223333222 2222
Q ss_pred HhccccCCCCCcEEEecCCCCCCCccccccchhHHHHHHHHHcCCCee-EEecc
Q 022032 146 LSGALFSWSKPLLVISGINRGSSCGHHMFYSGVVAGAREALICGVPSL-SISLN 198 (303)
Q Consensus 146 L~~~l~~~~~PDLVVSGIN~G~N~G~dv~ySGTVgAA~EA~l~GIPAI-AvS~~ 198 (303)
..++ ..+|.||.-.-....--.++.+-||.-....+...|++-| -+|..
T Consensus 58 -~~~~---~~~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~ 107 (219)
T 3dqp_A 58 -AKQL---HGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTI 107 (219)
T ss_dssp -HTTT---TTCSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred -HHHH---cCCCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECcc
Confidence 3322 3689999654444333345778889888777777898644 45554
No 36
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=55.72 E-value=12 Score=32.82 Aligned_cols=31 Identities=29% Similarity=0.403 Sum_probs=23.4
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEe
Q 022032 67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCA 101 (303)
Q Consensus 67 ~~ILlTNDDGi~SpGI~aL~~aL~~~G~~dV~VVA 101 (303)
||||||=--|+= | +.|++.|.+.| |+|+++.
T Consensus 1 MkILVTGatGfI--G-~~L~~~L~~~G-~~V~~l~ 31 (298)
T 4b4o_A 1 MRVLVGGGTGFI--G-TALTQLLNARG-HEVTLVS 31 (298)
T ss_dssp CEEEEETTTSHH--H-HHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEECCCCHH--H-HHHHHHHHHCC-CEEEEEE
Confidence 789999433321 2 67999999999 7999885
No 37
>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1
Probab=55.32 E-value=15 Score=31.34 Aligned_cols=41 Identities=17% Similarity=0.306 Sum_probs=31.9
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCCcEEEEeeCCCC
Q 022032 65 SKPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHVCAPQSDK 106 (303)
Q Consensus 65 ~~~~ILlTNDDGi~SpG-I~aL~~aL~~~G~~dV~VVAP~~~q 106 (303)
+.-+|||. ||++.+=+ +.++.+.|++.|-..|.+++|-...
T Consensus 119 ~gk~VllV-DDvi~TG~Tl~~a~~~L~~~ga~~V~v~~~v~~~ 160 (208)
T 1wd5_A 119 KGRDVVLV-DDGVATGASMEAALSVVFQEGPRRVVVAVPVASP 160 (208)
T ss_dssp TTSEEEEE-CSCBSSCHHHHHHHHHHHTTCCSEEEEEEEEBCH
T ss_pred CCCEEEEE-CCCccHHHHHHHHHHHHHHcCCCEEEEEEEEcCH
Confidence 34568888 99998633 7788899999997779999886644
No 38
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=53.62 E-value=19 Score=32.50 Aligned_cols=40 Identities=18% Similarity=0.092 Sum_probs=29.4
Q ss_pred CCCCeEEEecCCCCCCcc----HHHHHHHHHhcCCCcEEEEeeCCC
Q 022032 64 SSKPVLLVTNGDGIESPG----LVYLVEALVREGLYNVHVCAPQSD 105 (303)
Q Consensus 64 ~~~~~ILlTNDDGi~SpG----I~aL~~aL~~~G~~dV~VVAP~~~ 105 (303)
+++|+||+.++.. ..-| +..|++.|.+.| |+|.|+.....
T Consensus 38 ~~~mkIl~v~~~~-~~GG~~~~~~~l~~~L~~~G-~~v~v~~~~~~ 81 (416)
T 2x6q_A 38 LKGRSFVHVNSTS-FGGGVAEILHSLVPLLRSIG-IEARWFVIEGP 81 (416)
T ss_dssp TTTCEEEEEESCS-SSSTHHHHHHHHHHHHHHTT-CEEEEEECCCC
T ss_pred hhccEEEEEeCCC-CCCCHHHHHHHHHHHHHhCC-CeEEEEEccCC
Confidence 4668999888763 3334 446889999999 79998887543
No 39
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=53.06 E-value=9.4 Score=35.14 Aligned_cols=35 Identities=26% Similarity=0.374 Sum_probs=27.0
Q ss_pred CeEEEecCCCCCCcc----HHHHHHHHHhcCCCcEEEEeeCCC
Q 022032 67 PVLLVTNGDGIESPG----LVYLVEALVREGLYNVHVCAPQSD 105 (303)
Q Consensus 67 ~~ILlTNDDGi~SpG----I~aL~~aL~~~G~~dV~VVAP~~~ 105 (303)
||||++ +..+.| +.+|+++|++.| |+|+++.+...
T Consensus 1 MrIl~~---~~~~~GH~~p~l~la~~L~~~G-h~V~~~~~~~~ 39 (416)
T 1rrv_A 1 MRVLLS---VCGTRGDVEIGVALADRLKALG-VQTRMCAPPAA 39 (416)
T ss_dssp CEEEEE---EESCHHHHHHHHHHHHHHHHTT-CEEEEEECGGG
T ss_pred CeEEEE---ecCCCccHHHHHHHHHHHHHCC-CeEEEEeCHHH
Confidence 678887 233444 568999999999 79999998753
No 40
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=51.70 E-value=7.9 Score=34.91 Aligned_cols=37 Identities=22% Similarity=0.128 Sum_probs=26.5
Q ss_pred CeEEEecCCCC-CCccHHHHHHHHHhcCCCcEEEEeeCC
Q 022032 67 PVLLVTNGDGI-ESPGLVYLVEALVREGLYNVHVCAPQS 104 (303)
Q Consensus 67 ~~ILlTNDDGi-~SpGI~aL~~aL~~~G~~dV~VVAP~~ 104 (303)
||||+...-+. +---+.+|+++|++.| |+|+++.+..
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~G-h~V~~~~~~~ 38 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAG-HQVVMAANQD 38 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTT-CEEEEEECGG
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCC-CEEEEEeCHH
Confidence 68999855321 1112468999999999 7999998764
No 41
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=51.65 E-value=14 Score=34.07 Aligned_cols=36 Identities=31% Similarity=0.410 Sum_probs=28.2
Q ss_pred CeEEEecCCCCCCcc----HHHHHHHHHhcCCCcEEEEeeCCCC
Q 022032 67 PVLLVTNGDGIESPG----LVYLVEALVREGLYNVHVCAPQSDK 106 (303)
Q Consensus 67 ~~ILlTNDDGi~SpG----I~aL~~aL~~~G~~dV~VVAP~~~q 106 (303)
||||++- ..+.| +.+|+++|++.| |+|+++.+...+
T Consensus 1 M~Il~~~---~~~~GHv~P~l~la~~L~~~G-h~V~~~~~~~~~ 40 (415)
T 1iir_A 1 MRVLLAT---CGSRGDTEPLVALAVRVRDLG-ADVRMCAPPDCA 40 (415)
T ss_dssp CEEEEEC---CSCHHHHHHHHHHHHHHHHTT-CEEEEEECGGGH
T ss_pred CeEEEEc---CCCchhHHHHHHHHHHHHHCC-CeEEEEcCHHHH
Confidence 6788883 34455 678999999999 799999988743
No 42
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=50.54 E-value=10 Score=31.88 Aligned_cols=35 Identities=23% Similarity=0.374 Sum_probs=29.6
Q ss_pred eEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEeeCCC
Q 022032 68 VLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSD 105 (303)
Q Consensus 68 ~ILlTNDDGi~SpGI~aL~~aL~~~G~~dV~VVAP~~~ 105 (303)
-||+. ||++-.-+...++.|+..| ++|.+++|...
T Consensus 7 ~ill~--~g~~~~e~~~~~~~l~~ag-~~v~~vs~~~~ 41 (197)
T 2rk3_A 7 LVILA--KGAEEMETVIPVDVMRRAG-IKVTVAGLAGK 41 (197)
T ss_dssp EEEEC--TTCCHHHHHHHHHHHHHTT-CEEEEEETTCS
T ss_pred EEEEC--CCCcHHHHHHHHHHHHHCC-CEEEEEEcCCC
Confidence 35554 8999999999999999999 69999999764
No 43
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=48.98 E-value=92 Score=28.21 Aligned_cols=39 Identities=13% Similarity=0.035 Sum_probs=28.7
Q ss_pred CCCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEeeCCCC
Q 022032 63 DSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDK 106 (303)
Q Consensus 63 ~~~~~~ILlTNDDGi~SpGI~aL~~aL~~~G~~dV~VVAP~~~q 106 (303)
...+++|||.+- |. --+.+++++++.| ++|+++-+..+.
T Consensus 8 ~~~~~~ili~g~-g~---~~~~~~~a~~~~G-~~v~~~~~~~~~ 46 (391)
T 1kjq_A 8 RPAATRVMLLGS-GE---LGKEVAIECQRLG-VEVIAVDRYADA 46 (391)
T ss_dssp STTCCEEEEESC-SH---HHHHHHHHHHTTT-CEEEEEESSTTC
T ss_pred CCCCCEEEEECC-CH---HHHHHHHHHHHcC-CEEEEEECCCCC
Confidence 345678999965 32 2366889999999 699999876544
No 44
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=48.81 E-value=31 Score=27.12 Aligned_cols=37 Identities=14% Similarity=0.038 Sum_probs=23.0
Q ss_pred CCcEEEecCCCCCCCccccccchhHHHHHHHHHcCCCeeEEecc
Q 022032 155 KPLLVISGINRGSSCGHHMFYSGVVAGAREALICGVPSLSISLN 198 (303)
Q Consensus 155 ~PDLVVSGIN~G~N~G~dv~ySGTVgAA~EA~l~GIPAIAvS~~ 198 (303)
+|||||..++...-.|.+++ ..+.. ...+|.|.++..
T Consensus 71 ~~dlvilD~~l~~~~g~~l~------~~lr~-~~~~~ii~~s~~ 107 (164)
T 3t8y_A 71 KPDVITMDIEMPNLNGIEAL------KLIMK-KAPTRVIMVSSL 107 (164)
T ss_dssp CCSEEEECSSCSSSCHHHHH------HHHHH-HSCCEEEEEESS
T ss_pred CCCEEEEeCCCCCCCHHHHH------HHHHh-cCCceEEEEecC
Confidence 69999999988765444321 11222 234888888764
No 45
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=47.90 E-value=12 Score=32.72 Aligned_cols=40 Identities=18% Similarity=0.301 Sum_probs=31.0
Q ss_pred CCCeEEEec------C----CCCCCccHHHHHHHHHhcCCCcEEEEeeCCC
Q 022032 65 SKPVLLVTN------G----DGIESPGLVYLVEALVREGLYNVHVCAPQSD 105 (303)
Q Consensus 65 ~~~~ILlTN------D----DGi~SpGI~aL~~aL~~~G~~dV~VVAP~~~ 105 (303)
+|.-|+||+ | ||+.-.-+...++.|++.| ++|.++.|...
T Consensus 4 ~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag-~~v~~~s~~g~ 53 (243)
T 1rw7_A 4 KKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEG-FEVDFVSETGK 53 (243)
T ss_dssp CEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTT-CEEEEECSSSC
T ss_pred ceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCC-CEEEEECCCCC
Confidence 344567775 2 6777777888999999999 79999999864
No 46
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=47.41 E-value=9.8 Score=30.87 Aligned_cols=38 Identities=29% Similarity=0.394 Sum_probs=31.6
Q ss_pred CCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEeeCC
Q 022032 66 KPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQS 104 (303)
Q Consensus 66 ~~~ILlTNDDGi~SpGI~aL~~aL~~~G~~dV~VVAP~~ 104 (303)
.++|++-=-||++..-+...++.|+..| ++|.+++|..
T Consensus 2 ~~ki~il~~~g~~~~e~~~~~~~l~~ag-~~v~~vs~~~ 39 (168)
T 3l18_A 2 SMKVLFLSADGFEDLELIYPLHRIKEEG-HEVYVASFQR 39 (168)
T ss_dssp CCEEEEECCTTBCHHHHHHHHHHHHHTT-CEEEEEESSS
T ss_pred CcEEEEEeCCCccHHHHHHHHHHHHHCC-CEEEEEECCC
Confidence 3556555568999999999999999998 7999999975
No 47
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=46.27 E-value=22 Score=30.20 Aligned_cols=41 Identities=22% Similarity=0.353 Sum_probs=33.3
Q ss_pred CCCeEEEec-----C---CCCCCccHHHHHHHHHhcCCCcEEEEeeCCCC
Q 022032 65 SKPVLLVTN-----G---DGIESPGLVYLVEALVREGLYNVHVCAPQSDK 106 (303)
Q Consensus 65 ~~~~ILlTN-----D---DGi~SpGI~aL~~aL~~~G~~dV~VVAP~~~q 106 (303)
++.-|||+| | ||+...-+...++.|++.| ++|.+++|....
T Consensus 6 ~kv~ill~~~~~~~~~~~~G~~~~e~~~p~~~l~~ag-~~v~~vs~~~~~ 54 (224)
T 1u9c_A 6 KRVLMVVTNHTTITDDHKTGLWLEEFAVPYLVFQEKG-YDVKVASIQGGE 54 (224)
T ss_dssp CEEEEEECCCCEEETTEECCBCHHHHHHHHHHHHHTT-CEEEEEESSCBC
T ss_pred ceEEEEECCcccccCCCCCceeHHHHHHHHHHHHHCC-CeEEEECCCCCc
Confidence 345577774 2 8998889999999999998 799999998753
No 48
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A*
Probab=45.90 E-value=7.1 Score=40.60 Aligned_cols=42 Identities=26% Similarity=0.165 Sum_probs=34.8
Q ss_pred CCCCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEeeCC
Q 022032 62 VDSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQS 104 (303)
Q Consensus 62 ~~~~~~~ILlTNDDGi~SpGI~aL~~aL~~~G~~dV~VVAP~~ 104 (303)
++.++.-||++..||++..-+.+++++|++.| .+|.||+|..
T Consensus 527 l~g~kVaIL~a~~dGfe~~E~~~~~~~L~~aG-~~V~vVs~~~ 568 (688)
T 2iuf_A 527 LDGLKVGLLASVNKPASIAQGAKLQVALSSVG-VDVVVVAERX 568 (688)
T ss_dssp CTTCEEEEECCTTCHHHHHHHHHHHHHHGGGT-CEEEEEESSC
T ss_pred CCCCEEEEEecCCCCCcHHHHHHHHHHHHHCC-CEEEEEeccC
Confidence 33344557887779999999999999999999 6999999964
No 49
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=45.48 E-value=5.5 Score=33.86 Aligned_cols=43 Identities=14% Similarity=0.264 Sum_probs=32.0
Q ss_pred CCCCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEeeCCC
Q 022032 62 VDSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSD 105 (303)
Q Consensus 62 ~~~~~~~ILlTNDDGi~SpGI~aL~~aL~~~G~~dV~VVAP~~~ 105 (303)
|.+.+-.|+|-=.||++--=+..-++.|++.| ++|.++.|...
T Consensus 4 m~~t~~~v~il~~~gFe~~E~~~p~~~l~~ag-~~V~~~s~~~~ 46 (177)
T 4hcj_A 4 MGKTNNILYVMSGQNFQDEEYFESKKIFESAG-YKTKVSSTFIG 46 (177)
T ss_dssp -CCCCEEEEECCSEEECHHHHHHHHHHHHHTT-CEEEEEESSSE
T ss_pred cccCCCEEEEECCCCccHHHHHHHHHHHHHCC-CEEEEEECCCC
Confidence 44444445555567888777888999999999 79999998653
No 50
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=42.96 E-value=70 Score=27.67 Aligned_cols=73 Identities=19% Similarity=0.198 Sum_probs=43.9
Q ss_pred CCCeEEEecCCCCCCccH-HHHHHHHHhcCCCcEEEEeeCCCCcccccccCCCCceEEEEeeeCCceeEEecCChHHHHH
Q 022032 65 SKPVLLVTNGDGIESPGL-VYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVS 143 (303)
Q Consensus 65 ~~~~ILlTNDDGi~SpGI-~aL~~aL~~~G~~dV~VVAP~~~qSg~g~siT~~~pl~v~~v~~~g~~~yaV~GTPaDCV~ 143 (303)
+..+||||=- +-|| +++++.|.+.| ++|+++.-..++ + . ....+.+|=+=.+.+.
T Consensus 7 ~~k~vlVTGa----s~gIG~~ia~~l~~~G-~~V~~~~r~~~~---~------~----------~~~~~~~Dl~~~~~v~ 62 (264)
T 2dtx_A 7 RDKVVIVTGA----SMGIGRAIAERFVDEG-SKVIDLSIHDPG---E------A----------KYDHIECDVTNPDQVK 62 (264)
T ss_dssp TTCEEEEESC----SSHHHHHHHHHHHHTT-CEEEEEESSCCC---S------C----------SSEEEECCTTCHHHHH
T ss_pred CCCEEEEeCC----CCHHHHHHHHHHHHCC-CEEEEEecCccc---C------C----------ceEEEEecCCCHHHHH
Confidence 3457999942 3466 68899999999 799888755443 0 1 1223445544445555
Q ss_pred HHHhccccCCCCCcEEEe
Q 022032 144 LALSGALFSWSKPLLVIS 161 (303)
Q Consensus 144 laL~~~l~~~~~PDLVVS 161 (303)
-++..+...+.++|+||.
T Consensus 63 ~~~~~~~~~~g~iD~lv~ 80 (264)
T 2dtx_A 63 ASIDHIFKEYGSISVLVN 80 (264)
T ss_dssp HHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHcCCCCEEEE
Confidence 555543222247999985
No 51
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=40.39 E-value=19 Score=31.40 Aligned_cols=148 Identities=13% Similarity=-0.011 Sum_probs=72.8
Q ss_pred CCCCCCCeEEEecCCCCCCccH-HHHHHHHHhcCCCcEEEEeeCCCCcccccccCCCCceEEEEeeeCCceeEEecCChH
Q 022032 61 NVDSSKPVLLVTNGDGIESPGL-VYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPV 139 (303)
Q Consensus 61 ~~~~~~~~ILlTNDDGi~SpGI-~aL~~aL~~~G~~dV~VVAP~~~qSg~g~siT~~~pl~v~~v~~~g~~~yaV~GTPa 139 (303)
.|..+..+||||= .+-|| +++++.|.+.| ++|+++.-..++- -. .+...+...+.+|=+=.
T Consensus 22 ~m~l~~k~vlVTG----as~gIG~aia~~l~~~G-~~V~~~~r~~~~~--~~-----------~~~~~~~~~~~~Dv~~~ 83 (260)
T 3gem_A 22 HMTLSSAPILITG----ASQRVGLHCALRLLEHG-HRVIISYRTEHAS--VT-----------ELRQAGAVALYGDFSCE 83 (260)
T ss_dssp -----CCCEEESS----TTSHHHHHHHHHHHHTT-CCEEEEESSCCHH--HH-----------HHHHHTCEEEECCTTSH
T ss_pred CcCCCCCEEEEEC----CCCHHHHHHHHHHHHCC-CEEEEEeCChHHH--HH-----------HHHhcCCeEEECCCCCH
Confidence 4555666799993 23466 67999999999 7999887544321 00 00001234456675555
Q ss_pred HHHHHHHhccccCCCCCcEEEe--cCCCCCCCc---------cccccchhHHHHHHHHH----cCCCe-eEEecccCC-C
Q 022032 140 DCVSLALSGALFSWSKPLLVIS--GINRGSSCG---------HHMFYSGVVAGAREALI----CGVPS-LSISLNWKK-D 202 (303)
Q Consensus 140 DCV~laL~~~l~~~~~PDLVVS--GIN~G~N~G---------~dv~ySGTVgAA~EA~l----~GIPA-IAvS~~~~~-~ 202 (303)
+.+.-.+..+...+.++|.||. |+....... .++.+-||+-.+..+.- .+... |-+|..... .
T Consensus 84 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~ 163 (260)
T 3gem_A 84 TGIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKG 163 (260)
T ss_dssp HHHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTC
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCC
Confidence 5555555543322357999985 332221111 12446677766555532 23333 444432211 1
Q ss_pred CCCCcChHHHHHHHHHHHHHHHHH
Q 022032 203 ESQESDFKDAVSVCLPLINAATRD 226 (303)
Q Consensus 203 ~~~~~d~~~aa~~~~~li~~l~~~ 226 (303)
......|..+......+.+.+..+
T Consensus 164 ~~~~~~Y~asKaa~~~l~~~la~e 187 (260)
T 3gem_A 164 SSKHIAYCATKAGLESLTLSFAAR 187 (260)
T ss_dssp CSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcHhHHHHHHHHHHHHHHHHHH
Confidence 112234555444444455554433
No 52
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=40.25 E-value=25 Score=29.24 Aligned_cols=33 Identities=21% Similarity=0.390 Sum_probs=29.1
Q ss_pred EEEecCCCCCCccHHHHHHHHHhcCCCcEEEEeeCC
Q 022032 69 LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQS 104 (303)
Q Consensus 69 ILlTNDDGi~SpGI~aL~~aL~~~G~~dV~VVAP~~ 104 (303)
|||. ||++-..+...++.|++.| ++|.+++|..
T Consensus 10 ill~--~g~~~~e~~~~~~~l~~ag-~~v~~~s~~~ 42 (190)
T 4e08_A 10 VILA--PGAEEMEFIIAADVLRRAG-IKVTVAGLNG 42 (190)
T ss_dssp EEEC--TTCCHHHHHHHHHHHHHTT-CEEEEEESSS
T ss_pred EEEC--CCchHHHHHHHHHHHHHCC-CEEEEEECCC
Confidence 5554 8999999999999999999 7999999986
No 53
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=39.72 E-value=18 Score=29.81 Aligned_cols=39 Identities=15% Similarity=0.179 Sum_probs=31.5
Q ss_pred CCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEeeCCC
Q 022032 66 KPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSD 105 (303)
Q Consensus 66 ~~~ILlTNDDGi~SpGI~aL~~aL~~~G~~dV~VVAP~~~ 105 (303)
.++|+|-=-||++...+...++.|+..| ++|.+++|...
T Consensus 9 ~~~v~il~~~g~~~~e~~~~~~~l~~ag-~~v~~vs~~~~ 47 (190)
T 2vrn_A 9 GKKIAILAADGVEEIELTSPRAAIEAAG-GTTELISLEPG 47 (190)
T ss_dssp TCEEEEECCTTCBHHHHHHHHHHHHHTT-CEEEEEESSSS
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHHCC-CEEEEEecCCC
Confidence 3455544458999889999999999998 79999999864
No 54
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=39.71 E-value=31 Score=29.56 Aligned_cols=31 Identities=26% Similarity=0.355 Sum_probs=24.2
Q ss_pred CCeEEEecCCCCCCccH--HHHHHHHHhcCCCcEEEEeeC
Q 022032 66 KPVLLVTNGDGIESPGL--VYLVEALVREGLYNVHVCAPQ 103 (303)
Q Consensus 66 ~~~ILlTNDDGi~SpGI--~aL~~aL~~~G~~dV~VVAP~ 103 (303)
.|+|||| | + |. +.|++.|.+.| |+|+++.-.
T Consensus 5 ~~~ilVt---G--a-G~iG~~l~~~L~~~g-~~V~~~~r~ 37 (286)
T 3ius_A 5 TGTLLSF---G--H-GYTARVLSRALAPQG-WRIIGTSRN 37 (286)
T ss_dssp CCEEEEE---T--C-CHHHHHHHHHHGGGT-CEEEEEESC
T ss_pred cCcEEEE---C--C-cHHHHHHHHHHHHCC-CEEEEEEcC
Confidence 3789999 6 4 54 67889999998 799888643
No 55
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=38.94 E-value=18 Score=33.94 Aligned_cols=40 Identities=10% Similarity=0.076 Sum_probs=29.0
Q ss_pred CCCCCeEEEecCCCCCC----c---cHHHHHHHHHhcCCCcEEEEeeCC
Q 022032 63 DSSKPVLLVTNGDGIES----P---GLVYLVEALVREGLYNVHVCAPQS 104 (303)
Q Consensus 63 ~~~~~~ILlTNDDGi~S----p---GI~aL~~aL~~~G~~dV~VVAP~~ 104 (303)
..++|||++.-+. +.. - -+..|++.|.+.| |+|.|++|..
T Consensus 43 ~~~~mrI~~v~~~-~~p~~~~GG~~~v~~la~~L~~~G-heV~Vvt~~~ 89 (413)
T 2x0d_A 43 SIKGKRLNLLVPS-INQEHMFGGISTALKLFEQFDNKK-FKKRIILTDA 89 (413)
T ss_dssp CCCSCEEEEEESC-CCGGGCSHHHHHHHHHHTTSCTTT-CEEEEEESSC
T ss_pred CCCCceEEEEeCC-CCccccccHHHHHHHHHHHHHHcC-CceEEEEecC
Confidence 3577999877653 211 1 2677888899999 8999999974
No 56
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=38.56 E-value=1.9e+02 Score=24.83 Aligned_cols=99 Identities=13% Similarity=0.127 Sum_probs=54.6
Q ss_pred CCCeEEEecCCCCCCccH-HHHHHHHHhcCCCcEEEEeeCCCCcccccccCCCCceEEEEeeeCCceeEEecCChHHHHH
Q 022032 65 SKPVLLVTNGDGIESPGL-VYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVS 143 (303)
Q Consensus 65 ~~~~ILlTNDDGi~SpGI-~aL~~aL~~~G~~dV~VVAP~~~qSg~g~siT~~~pl~v~~v~~~g~~~yaV~GTPaDCV~ 143 (303)
+..+||||= .+-|| +++++.|.+.| ++|+++.-..++... . ....+.+|=+=.+.+.
T Consensus 27 ~~k~vlVTG----as~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~---------~--------~~~~~~~Dv~d~~~v~ 84 (260)
T 3un1_A 27 QQKVVVITG----ASQGIGAGLVRAYRDRN-YRVVATSRSIKPSAD---------P--------DIHTVAGDISKPETAD 84 (260)
T ss_dssp TCCEEEESS----CSSHHHHHHHHHHHHTT-CEEEEEESSCCCCSS---------T--------TEEEEESCTTSHHHHH
T ss_pred CCCEEEEeC----CCCHHHHHHHHHHHHCC-CEEEEEeCChhhccc---------C--------ceEEEEccCCCHHHHH
Confidence 445799993 23466 68999999999 799988754332111 0 1223455544444444
Q ss_pred HHHhccccCCCCCcEEEe--cCCCCCCC---c-------cccccchhHHHHHHH
Q 022032 144 LALSGALFSWSKPLLVIS--GINRGSSC---G-------HHMFYSGVVAGAREA 185 (303)
Q Consensus 144 laL~~~l~~~~~PDLVVS--GIN~G~N~---G-------~dv~ySGTVgAA~EA 185 (303)
-.+..+.....++|.||. |+...... . .++.+-||+--...+
T Consensus 85 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~ 138 (260)
T 3un1_A 85 RIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRA 138 (260)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 444433222247999986 33322111 0 125567777666655
No 57
>1n57_A Chaperone HSP31, protein YEDU; alpha-beta sandwich; 1.60A {Escherichia coli} SCOP: c.23.16.2 PDB: 1pv2_A 1izy_A 1ons_A 1izz_A
Probab=37.43 E-value=24 Score=32.09 Aligned_cols=31 Identities=13% Similarity=0.102 Sum_probs=26.1
Q ss_pred CCCCCccHHHHHHHHHhcCCCcEEEEeeCCCC
Q 022032 75 DGIESPGLVYLVEALVREGLYNVHVCAPQSDK 106 (303)
Q Consensus 75 DGi~SpGI~aL~~aL~~~G~~dV~VVAP~~~q 106 (303)
||++-.-+...++.|++.| ++|.++.|....
T Consensus 71 ~G~~~~E~~~p~~vL~~ag-~~v~i~S~~g~~ 101 (291)
T 1n57_A 71 TGNHPIETLLPLYHLHAAG-FEFEVATISGLM 101 (291)
T ss_dssp CCBCHHHHHHHHHHHHHTT-CCEEEEESSSCC
T ss_pred CCCcHHHHHHHHHHHHHCC-CEEEEEeCCCCc
Confidence 4777777888999999998 799999998653
No 58
>3re1_A Uroporphyrinogen-III synthetase; HEMD-like family, uroporphyrinogen III synthase, HMB, lyase; 2.50A {Pseudomonas syringae PV}
Probab=37.21 E-value=19 Score=31.80 Aligned_cols=36 Identities=22% Similarity=0.152 Sum_probs=23.8
Q ss_pred CCCCCCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEE
Q 022032 60 ENVDSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVC 100 (303)
Q Consensus 60 ~~~~~~~~~ILlTNDDGi~SpGI~aL~~aL~~~G~~dV~VV 100 (303)
|.|++..++||||= -.+.-..|.+.|++.| ++|+.+
T Consensus 8 ~~~~~~g~~IlvTR----p~~~a~~l~~~L~~~G-~~~~~~ 43 (269)
T 3re1_A 8 HSMDMSAWRLLLTR----PAEESAALARVLADAG-IFSSSL 43 (269)
T ss_dssp -----CCCEEEECS----CHHHHHHHHHHHHTTT-CEEEEC
T ss_pred cccccCCCEEEEeC----ChHHHHHHHHHHHHCC-CCEEEc
Confidence 56788999999993 3355678999999999 566543
No 59
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=37.17 E-value=1.7e+02 Score=26.92 Aligned_cols=40 Identities=15% Similarity=0.191 Sum_probs=26.9
Q ss_pred CCCCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEeeCCCC
Q 022032 62 VDSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDK 106 (303)
Q Consensus 62 ~~~~~~~ILlTNDDGi~SpGI~aL~~aL~~~G~~dV~VVAP~~~q 106 (303)
|..++.+|||.+- |- .+..+.++++++| ++|+++.+..+.
T Consensus 1 M~~~~k~l~Il~~-~~---~~~~i~~aa~~lG-~~vv~v~~~~~~ 40 (425)
T 3vot_A 1 MTKRNKNLAIICQ-NK---HLPFIFEEAERLG-LKVTFFYNSAED 40 (425)
T ss_dssp -CCCCCEEEEECC-CT---TCCHHHHHHHHTT-CEEEEEEETTSC
T ss_pred CCCCCcEEEEECC-Ch---hHHHHHHHHHHCC-CEEEEEECCCcc
Confidence 3455566777742 33 3445678999999 699999887653
No 60
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=37.03 E-value=82 Score=28.77 Aligned_cols=34 Identities=18% Similarity=0.044 Sum_probs=25.3
Q ss_pred CCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEee
Q 022032 64 SSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAP 102 (303)
Q Consensus 64 ~~~~~ILlTNDDGi~SpGI~aL~~aL~~~G~~dV~VVAP 102 (303)
+..++|||.|-.++ +++ +.+++++.| ++|+++-.
T Consensus 5 ~~~~~ilI~g~g~~---~~~-~~~a~~~~G-~~~v~v~~ 38 (403)
T 4dim_A 5 YDNKRLLILGAGRG---QLG-LYKAAKELG-IHTIAGTM 38 (403)
T ss_dssp -CCCEEEEECCCGG---GHH-HHHHHHHHT-CEEEEEEC
T ss_pred cCCCEEEEECCcHh---HHH-HHHHHHHCC-CEEEEEcC
Confidence 45678999998865 343 778899999 58888753
No 61
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=36.66 E-value=32 Score=27.58 Aligned_cols=39 Identities=18% Similarity=0.138 Sum_probs=25.4
Q ss_pred CCCcEEEecCCCCCCCccccccchhHHHHHHH--HHcCCCeeEEecc
Q 022032 154 SKPLLVISGINRGSSCGHHMFYSGVVAGAREA--LICGVPSLSISLN 198 (303)
Q Consensus 154 ~~PDLVVSGIN~G~N~G~dv~ySGTVgAA~EA--~l~GIPAIAvS~~ 198 (303)
.+|||||.-++.-.=-|.++ ...+.+ ....+|.|.+|..
T Consensus 56 ~~~DlillD~~MP~mdG~el------~~~ir~~~~~~~ipvI~lTa~ 96 (134)
T 3to5_A 56 GDFDFVVTDWNMPGMQGIDL------LKNIRADEELKHLPVLMITAE 96 (134)
T ss_dssp HCCSEEEEESCCSSSCHHHH------HHHHHHSTTTTTCCEEEEESS
T ss_pred CCCCEEEEcCCCCCCCHHHH------HHHHHhCCCCCCCeEEEEECC
Confidence 37999999999855444432 222221 2367999999975
No 62
>3cwc_A Putative glycerate kinase 2; structural genomics, center for structural genomics of infec diseases, csgid, IDP122, transferase; 2.23A {Salmonella typhimurium LT2}
Probab=34.82 E-value=72 Score=30.80 Aligned_cols=42 Identities=21% Similarity=0.165 Sum_probs=29.1
Q ss_pred CCcEEEecCCCCCCCccccccchhHHHHHHHHHcCCCeeEEecc
Q 022032 155 KPLLVISGINRGSSCGHHMFYSGVVAGAREALICGVPSLSISLN 198 (303)
Q Consensus 155 ~PDLVVSGIN~G~N~G~dv~ySGTVgAA~EA~l~GIPAIAvS~~ 198 (303)
.-||||.| .|.--.....=--.+|-|+.|..+|+|.|||.-.
T Consensus 287 ~ADLVITG--EG~~D~Qtl~GK~p~gVa~~A~~~~vPviaiaG~ 328 (383)
T 3cwc_A 287 DADLVITG--EGRIDSQTIHGKVPIGVANIAKRYNKPVIGIAGS 328 (383)
T ss_dssp HCSEEEEC--CEESCC----CHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CCCEEEEC--CCCCcCcCCCCcHHHHHHHHHHHhCCCEEEEeCC
Confidence 57999998 3333333333445578899999999999999864
No 63
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=34.60 E-value=1e+02 Score=26.68 Aligned_cols=75 Identities=21% Similarity=0.273 Sum_probs=44.3
Q ss_pred CCCCeEEEecCCCCCCccH-HHHHHHHHhcCCCcEEEEeeCCCCcccccccCCCCceEEEEeeeCCceeEEecCChHHHH
Q 022032 64 SSKPVLLVTNGDGIESPGL-VYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCV 142 (303)
Q Consensus 64 ~~~~~ILlTNDDGi~SpGI-~aL~~aL~~~G~~dV~VVAP~~~qSg~g~siT~~~pl~v~~v~~~g~~~yaV~GTPaDCV 142 (303)
.+..+||||= .+-|| +++++.|.+.| ++|+++.-..+.. . .....+.+|=+=.+.+
T Consensus 12 ~~~k~vlVTG----as~GIG~aia~~l~~~G-~~V~~~~r~~~~~--------~----------~~~~~~~~Dv~~~~~v 68 (269)
T 3vtz_A 12 FTDKVAIVTG----GSSGIGLAVVDALVRYG-AKVVSVSLDEKSD--------V----------NVSDHFKIDVTNEEEV 68 (269)
T ss_dssp TTTCEEEESS----TTSHHHHHHHHHHHHTT-CEEEEEESCC--C--------T----------TSSEEEECCTTCHHHH
T ss_pred CCCCEEEEeC----CCCHHHHHHHHHHHHCC-CEEEEEeCCchhc--------c----------CceeEEEecCCCHHHH
Confidence 3456799993 34477 68999999999 7888876433221 0 0122345664444455
Q ss_pred HHHHhccccCCCCCcEEEe
Q 022032 143 SLALSGALFSWSKPLLVIS 161 (303)
Q Consensus 143 ~laL~~~l~~~~~PDLVVS 161 (303)
.-.+..+...+.++|+||.
T Consensus 69 ~~~~~~~~~~~g~iD~lv~ 87 (269)
T 3vtz_A 69 KEAVEKTTKKYGRIDILVN 87 (269)
T ss_dssp HHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHcCCCCEEEE
Confidence 5555443222247999986
No 64
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=31.97 E-value=47 Score=29.21 Aligned_cols=34 Identities=9% Similarity=0.135 Sum_probs=27.3
Q ss_pred CCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEeeCCC
Q 022032 66 KPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSD 105 (303)
Q Consensus 66 ~~~ILlTNDDGi~SpGI~aL~~aL~~~G~~dV~VVAP~~~ 105 (303)
+|+|||.... --+.+++++++.| ++|+++.|..+
T Consensus 2 ~m~Ililg~g-----~~~~l~~a~~~~G-~~v~~~~~~~~ 35 (334)
T 2r85_A 2 KVRIATYASH-----SALQILKGAKDEG-FETIAFGSSKV 35 (334)
T ss_dssp CSEEEEESST-----THHHHHHHHHHTT-CCEEEESCGGG
T ss_pred ceEEEEECCh-----hHHHHHHHHHhCC-CEEEEEECCCC
Confidence 5789999765 3456889999999 79999998754
No 65
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=31.94 E-value=2e+02 Score=24.41 Aligned_cols=70 Identities=10% Similarity=0.106 Sum_probs=43.0
Q ss_pred CeEEEecCCCCCCccH-HHHHHHHHhcCCCcEEEEeeCCCCcccccccCCCCceEEEEeeeCCceeEEecCChHHHHHHH
Q 022032 67 PVLLVTNGDGIESPGL-VYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVSLA 145 (303)
Q Consensus 67 ~~ILlTNDDGi~SpGI-~aL~~aL~~~G~~dV~VVAP~~~qSg~g~siT~~~pl~v~~v~~~g~~~yaV~GTPaDCV~la 145 (303)
.+||||=-- -|| +++++.|.+.| ++|+++.-..++... ..+.++=+=.+.+.-.
T Consensus 23 k~vlITGas----~gIG~~la~~l~~~G-~~V~~~~r~~~~~~~--------------------~~~~~d~~d~~~v~~~ 77 (251)
T 3orf_A 23 KNILVLGGS----GALGAEVVKFFKSKS-WNTISIDFRENPNAD--------------------HSFTIKDSGEEEIKSV 77 (251)
T ss_dssp CEEEEETTT----SHHHHHHHHHHHHTT-CEEEEEESSCCTTSS--------------------EEEECSCSSHHHHHHH
T ss_pred CEEEEECCC----CHHHHHHHHHHHHCC-CEEEEEeCCcccccc--------------------cceEEEeCCHHHHHHH
Confidence 469999432 477 78999999999 789888755433110 1123333333455555
Q ss_pred HhccccCCCCCcEEEe
Q 022032 146 LSGALFSWSKPLLVIS 161 (303)
Q Consensus 146 L~~~l~~~~~PDLVVS 161 (303)
+..+.....++|.||.
T Consensus 78 ~~~~~~~~g~iD~li~ 93 (251)
T 3orf_A 78 IEKINSKSIKVDTFVC 93 (251)
T ss_dssp HHHHHTTTCCEEEEEE
T ss_pred HHHHHHHcCCCCEEEE
Confidence 5544333457999986
No 66
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=31.73 E-value=40 Score=25.36 Aligned_cols=39 Identities=18% Similarity=0.260 Sum_probs=24.4
Q ss_pred CCCcEEEecCCCCC-CCccccccchhHHHHHHHHHcCCCeeEEeccc
Q 022032 154 SKPLLVISGINRGS-SCGHHMFYSGVVAGAREALICGVPSLSISLNW 199 (303)
Q Consensus 154 ~~PDLVVSGIN~G~-N~G~dv~ySGTVgAA~EA~l~GIPAIAvS~~~ 199 (303)
..|||||..++... -.|.++ +-..++ ...+|.|.+|...
T Consensus 49 ~~~dlvi~D~~l~~~~~g~~~-----~~~l~~--~~~~~ii~ls~~~ 88 (140)
T 3h5i_A 49 WYPDLILMDIELGEGMDGVQT-----ALAIQQ--ISELPVVFLTAHT 88 (140)
T ss_dssp CCCSEEEEESSCSSSCCHHHH-----HHHHHH--HCCCCEEEEESSS
T ss_pred CCCCEEEEeccCCCCCCHHHH-----HHHHHh--CCCCCEEEEECCC
Confidence 47999999998742 233322 112222 2689999999753
No 67
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=31.34 E-value=12 Score=33.04 Aligned_cols=40 Identities=20% Similarity=0.164 Sum_probs=24.4
Q ss_pred CCCCeEEEecCCCC-CCcc----HHHHHHHHHhcCCCcEEEEeeCCCC
Q 022032 64 SSKPVLLVTNGDGI-ESPG----LVYLVEALVREGLYNVHVCAPQSDK 106 (303)
Q Consensus 64 ~~~~~ILlTNDDGi-~SpG----I~aL~~aL~~~G~~dV~VVAP~~~q 106 (303)
+++||||+..+.=. ..-| +..|++.| .| |+|+|+++....
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g-~~v~v~~~~~~~ 46 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DP-ESIVVFASTQNA 46 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CG-GGEEEEEECSSH
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cC-CeEEEEECCCCc
Confidence 35688888766321 2233 45566666 36 799999998753
No 68
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=30.56 E-value=55 Score=26.24 Aligned_cols=34 Identities=24% Similarity=0.301 Sum_probs=26.6
Q ss_pred CCCeEEEec--CCCCCCccHHHHHHHHHhcCCCcEEEE
Q 022032 65 SKPVLLVTN--GDGIESPGLVYLVEALVREGLYNVHVC 100 (303)
Q Consensus 65 ~~~~ILlTN--DDGi~SpGI~aL~~aL~~~G~~dV~VV 100 (303)
++++|||.. .| +|.-|+.-+...|+..| ++|+-.
T Consensus 2 ~~~~vvla~~~~d-~HdiG~~~v~~~l~~~G-~~Vi~l 37 (137)
T 1ccw_A 2 EKKTIVLGVIGSD-CHAVGNKILDHAFTNAG-FNVVNI 37 (137)
T ss_dssp CCCEEEEEEETTC-CCCHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCCEEEEEeCCCc-hhHHHHHHHHHHHHHCC-CEEEEC
Confidence 456777765 44 88899999999999999 677643
No 69
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=30.50 E-value=53 Score=23.97 Aligned_cols=38 Identities=21% Similarity=0.103 Sum_probs=22.6
Q ss_pred CCcEEEecCCCCC-CCccccccchhHHHHHHHHHcCCCeeEEecc
Q 022032 155 KPLLVISGINRGS-SCGHHMFYSGVVAGAREALICGVPSLSISLN 198 (303)
Q Consensus 155 ~PDLVVSGIN~G~-N~G~dv~ySGTVgAA~EA~l~GIPAIAvS~~ 198 (303)
+||+||..++... -.|.+ +-..+......+|.|.+|..
T Consensus 50 ~~dlvi~d~~l~~~~~g~~------~~~~l~~~~~~~~ii~~s~~ 88 (132)
T 2rdm_A 50 AIDGVVTDIRFCQPPDGWQ------VARVAREIDPNMPIVYISGH 88 (132)
T ss_dssp CCCEEEEESCCSSSSCHHH------HHHHHHHHCTTCCEEEEESS
T ss_pred CCCEEEEeeeCCCCCCHHH------HHHHHHhcCCCCCEEEEeCC
Confidence 6899998887653 23322 22222223457888888865
No 70
>3efe_A THIJ/PFPI family protein; structural GEN csgid, center for structural genomics of infectious disease chaperone; 2.30A {Bacillus anthracis}
Probab=30.44 E-value=63 Score=27.47 Aligned_cols=36 Identities=11% Similarity=0.074 Sum_probs=28.4
Q ss_pred EEEecCCCCCCccHHHHHHHHH--------hcCCCcEEEEeeCCC
Q 022032 69 LLVTNGDGIESPGLVYLVEALV--------REGLYNVHVCAPQSD 105 (303)
Q Consensus 69 ILlTNDDGi~SpGI~aL~~aL~--------~~G~~dV~VVAP~~~ 105 (303)
|++-=-||++---+...++.|+ +.+ ++|.+|+|...
T Consensus 8 v~ill~~g~~~~e~~~~~~~l~~a~~~~~~~~~-~~v~~vs~~~~ 51 (212)
T 3efe_A 8 AFLYVFNTMSDWEYGYLIAELNSGRYFKKDLAP-LKVITVGANKE 51 (212)
T ss_dssp EEEEECTTCCTTTTHHHHHHHHHCTTSCTTCCC-CCEEEEESSSC
T ss_pred EEEEECCCccHHHHHHHHHHHHhhhccccCCCC-eEEEEEECCCC
Confidence 4444457899889999999999 566 79999999754
No 71
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=29.32 E-value=35 Score=28.94 Aligned_cols=36 Identities=33% Similarity=0.492 Sum_probs=29.7
Q ss_pred eEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEeeCC
Q 022032 68 VLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQS 104 (303)
Q Consensus 68 ~ILlTNDDGi~SpGI~aL~~aL~~~G~~dV~VVAP~~ 104 (303)
+|++-=-||++..-+...++.|+..| ++|.+++|..
T Consensus 11 ~v~ill~~g~~~~e~~~~~~~l~~ag-~~v~~vs~~g 46 (208)
T 3ot1_A 11 RILVPVAHGSEEMETVIIVDTLVRAG-FQVTMAAVGD 46 (208)
T ss_dssp EEEEEECTTCCHHHHHHHHHHHHHTT-CEEEEEESSS
T ss_pred eEEEEECCCCcHHHHHHHHHHHHHCC-CEEEEEEcCC
Confidence 44444447999999999999999999 7999999964
No 72
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=29.15 E-value=30 Score=31.67 Aligned_cols=40 Identities=18% Similarity=0.222 Sum_probs=24.0
Q ss_pred CCCCCCCCeEEEecCC----CCCCccHHHHHHHHHhcCCCcEEEE
Q 022032 60 ENVDSSKPVLLVTNGD----GIESPGLVYLVEALVREGLYNVHVC 100 (303)
Q Consensus 60 ~~~~~~~~~ILlTNDD----Gi~SpGI~aL~~aL~~~G~~dV~VV 100 (303)
.+.-++.|+|||.|-. +....=..+..+.|++.| |+|.|+
T Consensus 16 ~~~~m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G-~eV~v~ 59 (280)
T 4gi5_A 16 ENLYFQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAG-HEVQVS 59 (280)
T ss_dssp ------CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTT-CEEEEE
T ss_pred CcchhhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCC-CeEEEE
Confidence 3456788999999753 222222466778888988 799887
No 73
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=29.12 E-value=85 Score=27.64 Aligned_cols=36 Identities=31% Similarity=0.303 Sum_probs=24.5
Q ss_pred CCCCeEEEecCCCCCCccHHHHHHHHHhc-CCCcEEEEeeCC
Q 022032 64 SSKPVLLVTNGDGIESPGLVYLVEALVRE-GLYNVHVCAPQS 104 (303)
Q Consensus 64 ~~~~~ILlTNDDGi~SpGI~aL~~aL~~~-G~~dV~VVAP~~ 104 (303)
|++|+|||++-.+. ..|+++|++. |.++|+++-+..
T Consensus 2 m~~~~Ili~g~g~~-----~~l~~~l~~~~~~~~v~~~d~~~ 38 (331)
T 2pn1_A 2 MQKPHLLITSAGRR-----AKLVEYFVKEFKTGRVSTADCSP 38 (331)
T ss_dssp TTCCEEEEESCTTC-----HHHHHHHHHHCCSSEEEEEESCT
T ss_pred CccceEEEecCCch-----HHHHHHHHHhcCCCEEEEEeCCC
Confidence 45689999965543 4688888876 325777775543
No 74
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=28.92 E-value=1.7e+02 Score=30.74 Aligned_cols=39 Identities=10% Similarity=0.298 Sum_probs=26.4
Q ss_pred CCCeEEEecCCCC----------CCcc----HH--------HHHHHHHhcCCCcEE----EEeeCC
Q 022032 65 SKPVLLVTNGDGI----------ESPG----LV--------YLVEALVREGLYNVH----VCAPQS 104 (303)
Q Consensus 65 ~~~~ILlTNDDGi----------~SpG----I~--------aL~~aL~~~G~~dV~----VVAP~~ 104 (303)
..++|++-++.|+ ++=| +. .|+++|.+.| |+|+ |+....
T Consensus 277 ~~~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~~L~~~G-~~V~~~V~v~Tr~~ 341 (816)
T 3s28_A 277 MVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQG-LNIKPRILILTRLL 341 (816)
T ss_dssp CCCEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHTT-CCCCCEEEEEEECC
T ss_pred ceeEEEEEcCCcccCccccCCCCCCCCceeeHHHHHHHHHHHHHHHHHHCC-CccceeeEEEeCCC
Confidence 4689999999997 3333 33 2555677889 6775 665543
No 75
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=28.77 E-value=2.1e+02 Score=24.43 Aligned_cols=73 Identities=18% Similarity=0.181 Sum_probs=44.4
Q ss_pred CCCeEEEecCCCCCCccH-HHHHHHHHhcCCCcEEEEeeCCCCcccccccCCCCceEEEEeeeCCceeEEecCChHHHHH
Q 022032 65 SKPVLLVTNGDGIESPGL-VYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVS 143 (303)
Q Consensus 65 ~~~~ILlTNDDGi~SpGI-~aL~~aL~~~G~~dV~VVAP~~~qSg~g~siT~~~pl~v~~v~~~g~~~yaV~GTPaDCV~ 143 (303)
+..+||||=- +-|| +++++.|.+.| ++|+++.-..++- .+ ...+.+|=+=.+.+.
T Consensus 20 ~~k~vlVTGa----s~gIG~aia~~l~~~G-~~V~~~~r~~~~~--------~~-----------~~~~~~Dl~d~~~v~ 75 (253)
T 2nm0_A 20 MSRSVLVTGG----NRGIGLAIARAFADAG-DKVAITYRSGEPP--------EG-----------FLAVKCDITDTEQVE 75 (253)
T ss_dssp CCCEEEEETT----TSHHHHHHHHHHHHTT-CEEEEEESSSCCC--------TT-----------SEEEECCTTSHHHHH
T ss_pred CCCEEEEeCC----CCHHHHHHHHHHHHCC-CEEEEEeCChHhh--------cc-----------ceEEEecCCCHHHHH
Confidence 3457999932 3477 78999999999 7898876533221 00 223445545455555
Q ss_pred HHHhccccCCCCCcEEEe
Q 022032 144 LALSGALFSWSKPLLVIS 161 (303)
Q Consensus 144 laL~~~l~~~~~PDLVVS 161 (303)
-.+..+.....++|.||.
T Consensus 76 ~~~~~~~~~~g~iD~lv~ 93 (253)
T 2nm0_A 76 QAYKEIEETHGPVEVLIA 93 (253)
T ss_dssp HHHHHHHHHTCSCSEEEE
T ss_pred HHHHHHHHHcCCCCEEEE
Confidence 555543322357999985
No 76
>4gdh_A DJ-1, uncharacterized protein C22E12.03C; unknown function, cysteine oxidation; 1.05A {Schizosaccharomyces pombe} PDB: 4ge3_A 4ge0_A
Probab=28.61 E-value=58 Score=27.42 Aligned_cols=40 Identities=18% Similarity=0.145 Sum_probs=31.4
Q ss_pred CCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEeeCCCC
Q 022032 64 SSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDK 106 (303)
Q Consensus 64 ~~~~~ILlTNDDGi~SpGI~aL~~aL~~~G~~dV~VVAP~~~q 106 (303)
|+|.-|||. ||++.-=+..-++.|++.| .+|.++.+..++
T Consensus 4 M~kV~ill~--dGfe~~E~~~p~~vl~~ag-~~v~~~s~~~~~ 43 (194)
T 4gdh_A 4 MVKVCLFVA--DGTDEIEFSAPWGIFKRAE-IPIDSVYVGENK 43 (194)
T ss_dssp -CCEEEEEE--TTCCHHHHHHHHHHHHHTT-CCEEEEEESSCT
T ss_pred CCEEEEEEC--CCcCHHHHHHHHHHHHHCC-CeEEEEEEcCCC
Confidence 455668887 6898777788899999998 699999987654
No 77
>1sy7_A Catalase 1; heme oxidation, singlet oxygen, oxidoreductase; HET: HDD HEM; 1.75A {Neurospora crassa} SCOP: c.23.16.3
Probab=28.54 E-value=1.8e+02 Score=30.20 Aligned_cols=38 Identities=13% Similarity=0.093 Sum_probs=30.8
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEeeCCC
Q 022032 67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSD 105 (303)
Q Consensus 67 ~~ILlTNDDGi~SpGI~aL~~aL~~~G~~dV~VVAP~~~ 105 (303)
++|+|-=-||++..-+..++++|...| ++|.+|+|...
T Consensus 535 rkVaILl~dGfe~~El~~p~dvL~~AG-~~V~ivS~~gg 572 (715)
T 1sy7_A 535 RRVAIIIADGYDNVAYDAAYAAISANQ-AIPLVIGPRRS 572 (715)
T ss_dssp CEEEEECCTTBCHHHHHHHHHHHHHTT-CEEEEEESCSS
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHhcC-CEEEEEECCCC
Confidence 344433348999999999999999999 79999999864
No 78
>3ono_A Ribose/galactose isomerase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.75A {Vibrio parahaemolyticus}
Probab=28.43 E-value=39 Score=30.24 Aligned_cols=36 Identities=8% Similarity=-0.096 Sum_probs=27.7
Q ss_pred CCeEEEecCCCCCCcc---HHHHHHHHHhcCCCcEEEEee
Q 022032 66 KPVLLVTNGDGIESPG---LVYLVEALVREGLYNVHVCAP 102 (303)
Q Consensus 66 ~~~ILlTNDDGi~SpG---I~aL~~aL~~~G~~dV~VVAP 102 (303)
+|+|-|-+|+++.-.. ...|.+.|++.| |+|+=+.+
T Consensus 3 ~MkIaigsDha~~lK~~~i~~~l~~~L~~~G-~eV~D~G~ 41 (214)
T 3ono_A 3 AMKIALMMENSQAAKNAMVAGELNSVAGGLG-HDVFNVGM 41 (214)
T ss_dssp CCEEEECCCGGGGGGHHHHHHHHHHHHHHTT-CEEEECSC
T ss_pred ccEEEEECCCcHHHHChhHHHHHHHHHHHCC-CEEEEcCC
Confidence 4889999999954444 337899999999 78887653
No 79
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=28.32 E-value=1.7e+02 Score=27.10 Aligned_cols=37 Identities=16% Similarity=0.076 Sum_probs=27.0
Q ss_pred CCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEeeCCCC
Q 022032 65 SKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDK 106 (303)
Q Consensus 65 ~~~~ILlTNDDGi~SpGI~aL~~aL~~~G~~dV~VVAP~~~q 106 (303)
.+++|||.+- | +--+.+++++++.| ++|+++-+..+.
T Consensus 18 ~~~~ili~g~-g---~~g~~~~~a~~~~G-~~v~~v~~~~~~ 54 (433)
T 2dwc_A 18 SAQKILLLGS-G---ELGKEIAIEAQRLG-VEVVAVDRYANA 54 (433)
T ss_dssp TCCEEEEESC-S---HHHHHHHHHHHHTT-CEEEEEESSTTC
T ss_pred CCCEEEEECC-C---HHHHHHHHHHHHCC-CEEEEEECCCCC
Confidence 4568999965 3 22456788999999 699999876543
No 80
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=27.92 E-value=2.5e+02 Score=24.64 Aligned_cols=99 Identities=12% Similarity=0.065 Sum_probs=59.1
Q ss_pred CCCeEEEecCCCCCCccH-HHHHHHHHhcCCCcEEEEeeCCCCcccccccCCCCceEEEEeeeCCceeEEecCChHHHHH
Q 022032 65 SKPVLLVTNGDGIESPGL-VYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVS 143 (303)
Q Consensus 65 ~~~~ILlTNDDGi~SpGI-~aL~~aL~~~G~~dV~VVAP~~~qSg~g~siT~~~pl~v~~v~~~g~~~yaV~GTPaDCV~ 143 (303)
+...+||| | .+.|| +++++.|.+.| ++|+++.-..++.. . ....+.+|=|=.+.+.
T Consensus 10 ~GK~alVT---G-as~GIG~aia~~la~~G-a~V~~~~r~~~~~~-~-----------------~~~~~~~Dv~~~~~v~ 66 (261)
T 4h15_A 10 RGKRALIT---A-GTKGAGAATVSLFLELG-AQVLTTARARPEGL-P-----------------EELFVEADLTTKEGCA 66 (261)
T ss_dssp TTCEEEES---C-CSSHHHHHHHHHHHHTT-CEEEEEESSCCTTS-C-----------------TTTEEECCTTSHHHHH
T ss_pred CCCEEEEe---c-cCcHHHHHHHHHHHHcC-CEEEEEECCchhCC-C-----------------cEEEEEcCCCCHHHHH
Confidence 44579999 4 45688 78999999999 79999875443211 1 1123456655555555
Q ss_pred HHHhccccCCCCCcEEEe--cCCCCCCC-----c-------cccccchhHHHHHHHH
Q 022032 144 LALSGALFSWSKPLLVIS--GINRGSSC-----G-------HHMFYSGVVAGAREAL 186 (303)
Q Consensus 144 laL~~~l~~~~~PDLVVS--GIN~G~N~-----G-------~dv~ySGTVgAA~EA~ 186 (303)
-.+..+...+.+.|.+|. |+...... . .++..-|++--+++++
T Consensus 67 ~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~ 123 (261)
T 4h15_A 67 IVAEATRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLV 123 (261)
T ss_dssp HHHHHHHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhc
Confidence 555544333468999986 65543321 1 1234567776666554
No 81
>4g41_A MTA/SAH nucleosidase; mixed alpha/beta, hydrolase, S-adenosylhomocysteine, cleavag; HET: MTA; 1.45A {Streptococcus pyogenes}
Probab=27.77 E-value=1.3e+02 Score=25.56 Aligned_cols=46 Identities=15% Similarity=0.109 Sum_probs=26.6
Q ss_pred HHHHHHHHHcCCCeeEEecccCC-CCCCCcChHH----HHHHHHHHHHHHH
Q 022032 179 VAGAREALICGVPSLSISLNWKK-DESQESDFKD----AVSVCLPLINAAT 224 (303)
Q Consensus 179 VgAA~EA~l~GIPAIAvS~~~~~-~~~~~~d~~~----aa~~~~~li~~l~ 224 (303)
.|-|.-|..+|+|.+.|..=.+. +.....+|+. |++.+.+++.+++
T Consensus 181 aa~~~va~~~~~p~~~Ir~ISD~ad~~~~~~~~~~~~~Aa~~~a~~v~~~l 231 (236)
T 4g41_A 181 AAIAQAAHTAGKPFIVVRAMSDTAAHDANITFDQFIIEAGKRSAQILMTFL 231 (236)
T ss_dssp HHHHHHHHHTTCCEEEEEEESSCTTCCCCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEEEEeCCCCcCcccHHHHHHHHHHHHHHHHHHHH
Confidence 44455666889999999753221 1223445654 4444555555554
No 82
>3u27_C Microcompartments protein; structural genomics, PSI-biology, MCSG, alpha-beta-alpha FOL bacterial microcompartment, shell protein; 1.85A {Leptotrichia buccalis c-1013-b}
Probab=27.53 E-value=30 Score=31.09 Aligned_cols=106 Identities=19% Similarity=0.117 Sum_probs=69.9
Q ss_pred CccHHHHHHHHHhcCCCcEEEEeeCCCCcccccccC-CCCceE-EE----------------------------------
Q 022032 79 SPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVT-LRETIA-VS---------------------------------- 122 (303)
Q Consensus 79 SpGI~aL~~aL~~~G~~dV~VVAP~~~qSg~g~siT-~~~pl~-v~---------------------------------- 122 (303)
+++|.+.=++++.. +|-++-+..-+-|.||+.. +...+- +.
T Consensus 48 ~~~I~AaD~A~KaA---~Vel~~~r~~~gg~g~~~~~~~G~~i~iigG~dvs~V~~av~~~~~~~~~~~~~~~~~~~gh~ 124 (220)
T 3u27_C 48 DVTYTALDEATKKA---VVDVAYGKSFYGGAANANTKLAGEVIGILSGPTPAEVKSGLAAAVDFIENEAAFISANDDDSI 124 (220)
T ss_dssp HHHHHHHHHHHHHS---SCEEEEEEECTTCGGGCCSTTTTTEEEEEEESSHHHHHHHHHHHHHHHHHTCCEEECSTTSCC
T ss_pred hHHHHHHHHHHhhc---CeEEEEEeeccccCcccccccCccEEEEecCCCHHHHHHHHHHHHHHHHhhHhheeccCCCCe
Confidence 57888888888774 7888888888777777754 221111 00
Q ss_pred ----Ee------------eeCCceeE-EecCChHHHHHHHHhccccCCCCCcEE-EecCCCCCCCccccccchhHHHHHH
Q 022032 123 ----SA------------EINGATAY-EVSGTPVDCVSLALSGALFSWSKPLLV-ISGINRGSSCGHHMFYSGVVAGARE 184 (303)
Q Consensus 123 ----~v------------~~~g~~~y-aV~GTPaDCV~laL~~~l~~~~~PDLV-VSGIN~G~N~G~dv~ySGTVgAA~E 184 (303)
.+ ..+..+++ .+.++|+ ...+|.+..++. ...+|+ +-.+..|.+.|. ++.+|.|+|..+
T Consensus 125 ~~~ah~ia~~~~al~~~~g~~~g~AiGil~~~p~-~ai~aaD~A~Ka-A~V~l~~~~~p~~~~~~~g-~~itGdvsAV~a 201 (220)
T 3u27_C 125 AYFAHCISRTGTYLSKTAGIPEGESLAYLIAPPL-EAMYALDVALKA-ADVRLVAFYGPPSETNFGG-GLLTGSQSACKA 201 (220)
T ss_dssp EEEEEEESSCCHHHHHHHTSCTTCCEEEEEESHH-HHHHHHHHHHHH-SSCEEEEEECSCCTTSCEE-EEEESCHHHHHH
T ss_pred EEEEeecCCcHHHHHHhcCCCCcceEEEEEcCCH-HHHHHHHHHHhh-CCeEEEEEEcccCcCcEEE-EEEEEcHHHHHH
Confidence 00 00011222 4678999 777888876643 467887 577777777776 889999999988
Q ss_pred HHHcCC
Q 022032 185 ALICGV 190 (303)
Q Consensus 185 A~l~GI 190 (303)
|+..|.
T Consensus 202 Av~a~~ 207 (220)
T 3u27_C 202 ACDAFA 207 (220)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 876543
No 83
>2xgg_A Microneme protein 2; A/I domain, cell adhesion, hydrolase; 2.05A {Toxoplasma gondii}
Probab=26.77 E-value=47 Score=26.89 Aligned_cols=34 Identities=29% Similarity=0.227 Sum_probs=25.9
Q ss_pred CCCeEEEecCCCCCCcc--HHHHHHHHHhcCCCcEEEEe
Q 022032 65 SKPVLLVTNGDGIESPG--LVYLVEALVREGLYNVHVCA 101 (303)
Q Consensus 65 ~~~~ILlTNDDGi~SpG--I~aL~~aL~~~G~~dV~VVA 101 (303)
.+.-|||| ||....+ +...++.|++.| -.|++|+
T Consensus 123 ~~~iillT--DG~~~~~~~~~~~~~~l~~~g-i~v~~ig 158 (178)
T 2xgg_A 123 PKLVIGMT--DGESDSDFRTVRAAKEIRELG-GIVTVLA 158 (178)
T ss_dssp CEEEEEEE--SSCCCHHHHHSHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEEEc--CCCCCCCccHHHHHHHHHHCC-CEEEEEE
Confidence 44558888 6887777 888899999988 4777764
No 84
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=26.64 E-value=29 Score=30.83 Aligned_cols=20 Identities=30% Similarity=0.423 Sum_probs=16.4
Q ss_pred cchhHHHHHHHHHcCCCeeEEe
Q 022032 175 YSGVVAGAREALICGVPSLSIS 196 (303)
Q Consensus 175 ySGTVgAA~EA~l~GIPAIAvS 196 (303)
.||++ .+||+.+|+|.|+.+
T Consensus 281 ~S~g~--~lEA~a~G~PvI~~~ 300 (376)
T 1v4v_A 281 DSGGL--QEEGAALGVPVVVLR 300 (376)
T ss_dssp SCHHH--HHHHHHTTCCEEECS
T ss_pred CCcCH--HHHHHHcCCCEEecc
Confidence 35766 679999999999874
No 85
>2fex_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; 1.70A {Agrobacterium tumefaciens} SCOP: c.23.16.2
Probab=26.56 E-value=67 Score=26.43 Aligned_cols=37 Identities=11% Similarity=0.075 Sum_probs=28.6
Q ss_pred eEEEecCCCCCCccHHHHHHHHHh-cCCCcEEEEeeCCC
Q 022032 68 VLLVTNGDGIESPGLVYLVEALVR-EGLYNVHVCAPQSD 105 (303)
Q Consensus 68 ~ILlTNDDGi~SpGI~aL~~aL~~-~G~~dV~VVAP~~~ 105 (303)
+|++-=-||++-.-+...++.|++ .| ++|.+++|...
T Consensus 3 ~i~ill~~g~~~~e~~~~~~~l~~a~~-~~v~~vs~~~~ 40 (188)
T 2fex_A 3 RIAIALAQDFADWEPALLAAAARSYLG-VEIVHATPDGM 40 (188)
T ss_dssp EEEEECCTTBCTTSSHHHHHHHHHHSC-CEEEEEETTSS
T ss_pred EEEEEeCCCchHHHHHHHHHHHhhcCC-ceEEEEeCCCC
Confidence 344433478988888888999998 87 69999999864
No 86
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=26.52 E-value=63 Score=25.42 Aligned_cols=33 Identities=24% Similarity=0.265 Sum_probs=25.7
Q ss_pred CCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEeeC
Q 022032 66 KPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQ 103 (303)
Q Consensus 66 ~~~ILlTNDDGi~SpGI~aL~~aL~~~G~~dV~VVAP~ 103 (303)
+.+|+|. |...-| +.+++.|.+.| ++|+++.+.
T Consensus 3 ~~~vlI~---G~G~vG-~~la~~L~~~g-~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVC---GHSILA-INTILQLNQRG-QNVTVISNL 35 (153)
T ss_dssp CSCEEEE---CCSHHH-HHHHHHHHHTT-CCEEEEECC
T ss_pred CCcEEEE---CCCHHH-HHHHHHHHHCC-CCEEEEECC
Confidence 4568888 766666 56788899888 799999875
No 87
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=26.39 E-value=1.3e+02 Score=28.19 Aligned_cols=35 Identities=17% Similarity=0.149 Sum_probs=25.4
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEeeCCCC
Q 022032 67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDK 106 (303)
Q Consensus 67 ~~ILlTNDDGi~SpGI~aL~~aL~~~G~~dV~VVAP~~~q 106 (303)
.+|||+|-.. -+ ..+++++++.| ++|+++.+..+.
T Consensus 7 k~ILI~g~g~---~~-~~i~~a~~~~G-~~vv~v~~~~~~ 41 (461)
T 2dzd_A 7 RKVLVANRGE---IA-IRVFRACTELG-IRTVAIYSKEDV 41 (461)
T ss_dssp SEEEECSCHH---HH-HHHHHHHHHHT-CEEEEEECGGGT
T ss_pred cEEEEECCcH---HH-HHHHHHHHHcC-CEEEEEECCccc
Confidence 4799998532 13 45788999999 699999876554
No 88
>1vi7_A Hypothetical protein YIGZ; structural genomics, unknown function; 2.80A {Escherichia coli} SCOP: d.14.1.11 d.58.11.2
Probab=26.30 E-value=48 Score=29.64 Aligned_cols=30 Identities=20% Similarity=0.273 Sum_probs=24.5
Q ss_pred EecCCCCCC--ccHHHHHHHHHhcCCCcEEEEe
Q 022032 71 VTNGDGIES--PGLVYLVEALVREGLYNVHVCA 101 (303)
Q Consensus 71 lTNDDGi~S--pGI~aL~~aL~~~G~~dV~VVA 101 (303)
=.||||--+ .|...| +.|+..+..||.||.
T Consensus 71 ~~sDDGEp~GTAG~piL-~~L~~~~l~nv~vVV 102 (217)
T 1vi7_A 71 GFSDDGEPAGTAGKPML-AQLMGSGVGEITAVV 102 (217)
T ss_dssp EEECTTSCTTSSSHHHH-HHHHHHTCCSEEEEC
T ss_pred ccCCCCCCCCcchHHHH-HHHHHcCCCCEEEEE
Confidence 369999977 998866 678888888998874
No 89
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=26.09 E-value=39 Score=28.52 Aligned_cols=34 Identities=29% Similarity=0.404 Sum_probs=29.2
Q ss_pred EEEecCCCCCCccHHHHHHHHHhcCCCcEEEEeeCCC
Q 022032 69 LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSD 105 (303)
Q Consensus 69 ILlTNDDGi~SpGI~aL~~aL~~~G~~dV~VVAP~~~ 105 (303)
||++ ||++-..+...++.|+..| ++|.+++|...
T Consensus 7 ill~--~g~~~~e~~~~~~~l~~ag-~~v~~vs~~~~ 40 (205)
T 2ab0_A 7 VCLA--PGSEETEAVTTIDLLVRGG-IKVTTASVASD 40 (205)
T ss_dssp EEEC--TTCCHHHHHHHHHHHHHTT-CEEEEEECSST
T ss_pred EEEc--CCCcHHHHHHHHHHHHHCC-CEEEEEeCCCC
Confidence 5555 7998889999999999999 79999999875
No 90
>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis}
Probab=26.08 E-value=47 Score=27.74 Aligned_cols=43 Identities=23% Similarity=0.295 Sum_probs=32.8
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCCcEEEEeeCCCCcc
Q 022032 65 SKPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHVCAPQSDKSV 108 (303)
Q Consensus 65 ~~~~ILlTNDDGi~SpG-I~aL~~aL~~~G~~dV~VVAP~~~qSg 108 (303)
+.-+|||. ||.+.+=+ +.+..+.|++.|...|.++++..-..+
T Consensus 97 ~gk~VllV-DDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~ 140 (185)
T 2geb_A 97 EGKDVLIV-EDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPER 140 (185)
T ss_dssp TTSEEEEE-EEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGG
T ss_pred CCCEEEEE-CCccCCHHHHHHHHHHHHhcCCCEEEEEEEEECCCc
Confidence 34578888 99888643 778889999998778888888754444
No 91
>2cve_A Hypothetical protein TTHA1053; COG1739, UPF0029, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: TLA; 1.60A {Thermus thermophilus} SCOP: d.14.1.11 d.58.11.2
Probab=25.87 E-value=50 Score=28.94 Aligned_cols=30 Identities=33% Similarity=0.344 Sum_probs=24.3
Q ss_pred EecCCCCCC--ccHHHHHHHHHhcCCCcEEEEe
Q 022032 71 VTNGDGIES--PGLVYLVEALVREGLYNVHVCA 101 (303)
Q Consensus 71 lTNDDGi~S--pGI~aL~~aL~~~G~~dV~VVA 101 (303)
=.||||--+ .|...| +.|+..+..+|.||.
T Consensus 59 ~~~DDGEp~GTAG~piL-~~L~~~~l~nv~vVV 90 (191)
T 2cve_A 59 RFSDDGEPSGTAGRPIL-HAIEAQGLDRVAVLV 90 (191)
T ss_dssp EEECTTSSTTSSHHHHH-HHHHHTTBCSEEEEE
T ss_pred ccCCCCCcCCcChHHHH-HHHHHcCCCcEEEEE
Confidence 469999877 998866 678888888888873
No 92
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=25.22 E-value=56 Score=30.35 Aligned_cols=39 Identities=21% Similarity=0.263 Sum_probs=31.7
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEeeCCCC
Q 022032 67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDK 106 (303)
Q Consensus 67 ~~ILlTNDDGi~SpGI~aL~~aL~~~G~~dV~VVAP~~~q 106 (303)
.+|+|-=-||++-.-+...++.|++.| ++|.+++|...+
T Consensus 206 ~ki~ill~dg~~~~e~~~~~~~l~~ag-~~v~~vs~~~~~ 244 (396)
T 3uk7_A 206 KRILFLCGDYMEDYEVKVPFQSLQALG-CQVDAVCPEKKA 244 (396)
T ss_dssp CEEEEECCTTEEHHHHHHHHHHHHHHT-CEEEEECTTCCT
T ss_pred ceEEEEecCCCcchhHHHHHHHHHHCC-CEEEEECCCCCC
Confidence 344444458999888999999999999 799999998754
No 93
>3zbd_A NSP1, P9, non-structural protein 1; viral protein, alphacoronavirus; 1.49A {Porcine transmissible gastroenteritiscoronavirus}
Probab=25.17 E-value=18 Score=29.44 Aligned_cols=31 Identities=19% Similarity=0.312 Sum_probs=24.6
Q ss_pred CCCCCCCCCeEEEecCCCCCCccHHHHHHHHH
Q 022032 59 TENVDSSKPVLLVTNGDGIESPGLVYLVEALV 90 (303)
Q Consensus 59 ~~~~~~~~~~ILlTNDDGi~SpGI~aL~~aL~ 90 (303)
-|+|..++..|++.+|-+|.++|.. ..+++.
T Consensus 6 ~~~~~~~~~tLavasDseIsa~G~~-~~dav~ 36 (113)
T 3zbd_A 6 HHHMSSKQFKILVNEDYQVNVPSLP-IRDVLQ 36 (113)
T ss_dssp CCCCCCEEEEEEECSSCCEECCCBC-HHHHHH
T ss_pred ccccccceEEEEEecccccccCCcC-HHHHHH
Confidence 3567778889999999999999976 555554
No 94
>1z7g_A HGPRT, HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; flexibility, trans CIS peptide bond isomerization, nucleotide binding; 1.90A {Homo sapiens} SCOP: c.61.1.1 PDB: 1hmp_A* 1bzy_A 3gep_A* 3ggc_A* 3ggj_A* 1d6n_A* 2vfa_A*
Probab=25.07 E-value=55 Score=28.32 Aligned_cols=41 Identities=15% Similarity=0.127 Sum_probs=31.2
Q ss_pred CCeEEEecCCCCCCcc-HHHHHHHHHhcCCCcEEEEeeCCCCc
Q 022032 66 KPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHVCAPQSDKS 107 (303)
Q Consensus 66 ~~~ILlTNDDGi~SpG-I~aL~~aL~~~G~~dV~VVAP~~~qS 107 (303)
.-+|||. ||.+.+=+ ++++.+.|++.|...|.++++-.-++
T Consensus 126 gk~VliV-DDii~TG~Tl~~~~~~L~~~g~~~v~~~~l~~k~~ 167 (217)
T 1z7g_A 126 GKNVLIV-EDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVKRT 167 (217)
T ss_dssp TSEEEEE-EEECCCHHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred CCEEEEE-eceeCcHHHHHHHHHHHHhcCCCEEEEEEEEECcc
Confidence 3468888 99998744 78888999999877888888855333
No 95
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=24.95 E-value=35 Score=30.09 Aligned_cols=19 Identities=47% Similarity=0.557 Sum_probs=16.0
Q ss_pred chhHHHHHHHHHcCCCeeEEe
Q 022032 176 SGVVAGAREALICGVPSLSIS 196 (303)
Q Consensus 176 SGTVgAA~EA~l~GIPAIAvS 196 (303)
||++ .+||+.+|+|.|+..
T Consensus 290 sg~~--~lEA~a~G~Pvi~~~ 308 (375)
T 3beo_A 290 SGGV--QEEAPSLGVPVLVLR 308 (375)
T ss_dssp CHHH--HHHHHHHTCCEEECS
T ss_pred CCCh--HHHHHhcCCCEEEec
Confidence 4666 889999999999873
No 96
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=24.76 E-value=43 Score=28.86 Aligned_cols=38 Identities=24% Similarity=0.292 Sum_probs=30.7
Q ss_pred CeEEEecC---CCCCCccHHHHHHHHHhcCCCcEEEEeeCCC
Q 022032 67 PVLLVTNG---DGIESPGLVYLVEALVREGLYNVHVCAPQSD 105 (303)
Q Consensus 67 ~~ILlTND---DGi~SpGI~aL~~aL~~~G~~dV~VVAP~~~ 105 (303)
.-||++|- ||+.-.-+...++.|++.| ++|.+++|...
T Consensus 9 v~ill~~~~~~~g~~~~E~~~p~~~l~~ag-~~v~~~s~~g~ 49 (232)
T 1vhq_A 9 IGVILSGCGVYDGSEIHEAVLTLLAISRSG-AQAVCFAPDKQ 49 (232)
T ss_dssp EEEECCSBSTTTSBCHHHHHHHHHHHHHTT-CEEEEEECSSB
T ss_pred EEEEEccCCCCCCeeHHHHHHHHHHHHHCC-CEEEEEecCCC
Confidence 34566642 6888888999999999999 79999999864
No 97
>1yfz_A Hypoxanthine-guanine phosphoribosyltransferase; protein-nucleotide complex; HET: IMP; 2.20A {Thermoanaerobacter tengcongensis} SCOP: c.61.1.1 PDB: 1r3u_A*
Probab=24.74 E-value=45 Score=28.35 Aligned_cols=42 Identities=24% Similarity=0.300 Sum_probs=32.5
Q ss_pred CCeEEEecCCCCCCcc-HHHHHHHHHhcCCCcEEEEeeCCCCcc
Q 022032 66 KPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHVCAPQSDKSV 108 (303)
Q Consensus 66 ~~~ILlTNDDGi~SpG-I~aL~~aL~~~G~~dV~VVAP~~~qSg 108 (303)
.-+|||. ||.+.+=+ +.+..+.|++.|...|.++++..-..+
T Consensus 118 gk~VllV-DDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~ 160 (205)
T 1yfz_A 118 GKDVLIV-EDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPER 160 (205)
T ss_dssp TSEEEEE-EEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGG
T ss_pred cCEEEEE-CCccCcHHHHHHHHHHHHhcCCCEEEEEEEEecCcc
Confidence 3478888 99888643 778889999998778888888755444
No 98
>3o4v_A MTA/SAH nucleosidase; mixed alpha/beta dimer, hydrolase; HET: 4CT; 1.75A {Escherichia coli} SCOP: c.56.2.1 PDB: 1jys_A* 1nc1_A* 1nc3_A* 1y6q_A* 1y6r_A* 1z5p_A* 3df9_A* 1z5n_A* 1z5o_A* 4g89_A*
Probab=24.19 E-value=1.1e+02 Score=26.02 Aligned_cols=50 Identities=12% Similarity=0.078 Sum_probs=29.7
Q ss_pred hHHHHHHHHHcCCCeeEEecccCCC-CCCCcChH----HHHHHHHHHHHHHHHHh
Q 022032 178 VVAGAREALICGVPSLSISLNWKKD-ESQESDFK----DAVSVCLPLINAATRDI 227 (303)
Q Consensus 178 TVgAA~EA~l~GIPAIAvS~~~~~~-~~~~~d~~----~aa~~~~~li~~l~~~~ 227 (303)
|.+-|.-|..+|+|.+++..-.+.. .....+|+ .|++.+.+++.++++.+
T Consensus 177 ~aa~a~va~~~~ip~~~ir~ISD~a~~~~~~~~~~~~~~aa~~~a~~v~~~l~~l 231 (234)
T 3o4v_A 177 ATAIAHVCHNFNVPFVVVRAISDVADQQSHLSFDEFLAVAAKQSSLMVESLVQKL 231 (234)
T ss_dssp HHHHHHHHHHHTCCEEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEEEEecCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3555666777899999998643221 11223344 35566667777766554
No 99
>1hgx_A HGXPRTASE, hypoxanthine-guanine-xanthine phosphoribosyltransferase; glycosyltransferase, purine salvage, transferase (glycosyltransferase); HET: 5GP; 1.90A {Tritrichomonas foetus} SCOP: c.61.1.1
Probab=24.13 E-value=54 Score=27.19 Aligned_cols=42 Identities=19% Similarity=0.183 Sum_probs=31.7
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCCcEEEEeeCCCCc
Q 022032 65 SKPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHVCAPQSDKS 107 (303)
Q Consensus 65 ~~~~ILlTNDDGi~SpG-I~aL~~aL~~~G~~dV~VVAP~~~qS 107 (303)
+.-+|||. ||.+.+=+ |.++.+.|++.|...|.+++.-.-..
T Consensus 94 ~gk~VllV-DDvi~TG~Tl~~a~~~L~~~ga~~v~~~~l~~~~~ 136 (183)
T 1hgx_A 94 EGRHVLVV-EDIIDTGLTMYQLLNNLQMRKPASLKVCTLCDKDI 136 (183)
T ss_dssp TTSEEEEE-EEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred CCCEEEEE-CCccCCHHHHHHHHHHHHhcCCCEEEEEEEEecCc
Confidence 34568888 99998744 78888999999877888888755433
No 100
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=24.01 E-value=62 Score=24.67 Aligned_cols=39 Identities=13% Similarity=0.061 Sum_probs=23.6
Q ss_pred CCCcEEEecCCCCCCCccccccchhHHHHHHHHHcCCCeeEEecc
Q 022032 154 SKPLLVISGINRGSSCGHHMFYSGVVAGAREALICGVPSLSISLN 198 (303)
Q Consensus 154 ~~PDLVVSGIN~G~N~G~dv~ySGTVgAA~EA~l~GIPAIAvS~~ 198 (303)
.+|||||..++...-.|.+++ ..+......+|.|.+|..
T Consensus 57 ~~~dlvi~D~~l~~~~g~~~~------~~l~~~~~~~~ii~~s~~ 95 (153)
T 3hv2_A 57 REVDLVISAAHLPQMDGPTLL------ARIHQQYPSTTRILLTGD 95 (153)
T ss_dssp SCCSEEEEESCCSSSCHHHHH------HHHHHHCTTSEEEEECCC
T ss_pred CCCCEEEEeCCCCcCcHHHHH------HHHHhHCCCCeEEEEECC
Confidence 368999998887654443321 122223457888888754
No 101
>2vyo_A ECU11_0510, chitooligosaccharide deacetylase; CE4 esterase, native protein, microsporidian, chitin deacetylase, hydrolase, inactive; 1.50A {Encephalitozoon cuniculi}
Probab=23.68 E-value=55 Score=28.81 Aligned_cols=35 Identities=11% Similarity=0.106 Sum_probs=28.4
Q ss_pred CCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEE
Q 022032 64 SSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHV 99 (303)
Q Consensus 64 ~~~~~ILlTNDDGi~SpGI~aL~~aL~~~G~~dV~V 99 (303)
..+..|.||=|||+...+...+.+.|++.|. ..++
T Consensus 23 ~~~k~VaLTFDDG~~~~~t~~il~iL~~~~v-~ATF 57 (254)
T 2vyo_A 23 TNSGMIAINFVDGPVRGVTDRILNTLDELGV-KATF 57 (254)
T ss_dssp SSSSEEEEEEESCCCTTHHHHHHHHHHHHTC-CCEE
T ss_pred CCCCEEEEEEeCCCCcccHHHHHHHHHHcCC-CEEE
Confidence 3445699999999998888889999999885 4555
No 102
>2jbh_A Phosphoribosyltransferase domain-containing prote; glycosyltransferase, purine salvage; HET: 5GP; 1.7A {Homo sapiens}
Probab=23.66 E-value=54 Score=28.49 Aligned_cols=42 Identities=10% Similarity=0.120 Sum_probs=32.0
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCCcEEEEeeCCCCc
Q 022032 65 SKPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHVCAPQSDKS 107 (303)
Q Consensus 65 ~~~~ILlTNDDGi~SpG-I~aL~~aL~~~G~~dV~VVAP~~~qS 107 (303)
+.-+|||. ||.+.+=+ ++++.+.|++.|...|.++++..-++
T Consensus 133 ~Gk~VllV-DDii~TG~Tl~~a~~~L~~~ga~~V~va~l~~k~~ 175 (225)
T 2jbh_A 133 AGKNVLIV-EDVVGTGRTMKALLSNIEKYKPNMIKVASLLVKRT 175 (225)
T ss_dssp TTSEEEEE-EEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred CCCEEEEE-ccccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCc
Confidence 34568888 99998743 67889999999877888888865343
No 103
>1tc1_A Protein (hypoxanthine phosphoribosyltransferase); transferase,phosphoribosyltransferase, purine salvage, nucleotide metabolism; HET: FMB MES; 1.41A {Trypanosoma cruzi} SCOP: c.61.1.1 PDB: 1tc2_A* 1p19_A* 1p18_A* 1p17_A* 1i0l_A* 1i14_A* 1i0i_A* 1i13_A*
Probab=23.41 E-value=55 Score=28.58 Aligned_cols=43 Identities=12% Similarity=0.115 Sum_probs=33.0
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCCcEEEEeeCCCCcc
Q 022032 65 SKPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHVCAPQSDKSV 108 (303)
Q Consensus 65 ~~~~ILlTNDDGi~SpG-I~aL~~aL~~~G~~dV~VVAP~~~qSg 108 (303)
+.-+|||. ||.+.+=+ ++++.+.|++.|-..|.++++..-..+
T Consensus 102 ~Gk~VLLV-DDii~TG~Tl~~a~~~L~~~Ga~~V~v~~l~~k~~~ 145 (220)
T 1tc1_A 102 EGHHVLIV-EDIVDTALTLNYLYHMYFTRRPASLKTVVLLDKREG 145 (220)
T ss_dssp TTSEEEEE-EEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECTTC
T ss_pred CCCEEEEE-eCccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCcc
Confidence 34578888 99998633 788999999998788888888755443
No 104
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=23.34 E-value=88 Score=25.28 Aligned_cols=33 Identities=15% Similarity=0.197 Sum_probs=23.1
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEeeC
Q 022032 67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQ 103 (303)
Q Consensus 67 ~~ILlTNDDGi~SpGI~aL~~aL~~~G~~dV~VVAP~ 103 (303)
|+||||==-|. -| ++|++.|.+.| ++|+++.-.
T Consensus 1 MkvlVtGatG~--iG-~~l~~~L~~~g-~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGIIGATGR--AG-SRILEEAKNRG-HEVTAIVRN 33 (221)
T ss_dssp CEEEEETTTSH--HH-HHHHHHHHHTT-CEEEEEESC
T ss_pred CeEEEEcCCch--hH-HHHHHHHHhCC-CEEEEEEcC
Confidence 67999932221 12 67889999998 799888654
No 105
>1pzm_A HGPRT, hypoxanthine-guanine phosphoribosyltransferase; HET: 5GP; 2.10A {Leishmania tarentolae} SCOP: c.61.1.1
Probab=23.22 E-value=57 Score=28.08 Aligned_cols=43 Identities=14% Similarity=0.166 Sum_probs=32.9
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCCcEEEEeeCCCCcc
Q 022032 65 SKPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHVCAPQSDKSV 108 (303)
Q Consensus 65 ~~~~ILlTNDDGi~SpG-I~aL~~aL~~~G~~dV~VVAP~~~qSg 108 (303)
+.-+|||. ||.+.+=+ ++++.+.|++.|...|.++++..-..+
T Consensus 117 ~gk~VllV-DDvi~TG~Tl~aa~~~L~~~Ga~~V~v~~l~~k~~~ 160 (211)
T 1pzm_A 117 ENRHIMLV-EDIVDSAITLQYLMRFMLAKKPASLKTVVLLDKPSG 160 (211)
T ss_dssp TTCEEEEE-EEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGG
T ss_pred CCCEEEEE-CCccccHHHHHHHHHHHHhcCCCEEEEEEEEecCcc
Confidence 34578888 99998643 788999999998778888888764443
No 106
>3gfh_A Ethanolamine utilization protein EUTL; bacterial mircocompartment, shell protein, structural protein; 2.20A {Escherichia coli} PDB: 3mpv_A 3i87_A 3i82_A
Probab=22.82 E-value=16 Score=33.08 Aligned_cols=52 Identities=17% Similarity=0.184 Sum_probs=38.9
Q ss_pred EecCChHHHHHHHHhccccCCCCCcEE-EecCCCCCCCccccccchhHHHHHHHHH
Q 022032 133 EVSGTPVDCVSLALSGALFSWSKPLLV-ISGINRGSSCGHHMFYSGVVAGAREALI 187 (303)
Q Consensus 133 aV~GTPaDCV~laL~~~l~~~~~PDLV-VSGIN~G~N~G~dv~ySGTVgAA~EA~l 187 (303)
.+.++|+ ...+|.+..++. ...+|+ +..+..|.+.|. ++.+|.|+|..+|+.
T Consensus 150 il~~~p~-~aI~aaD~A~Ka-A~V~l~~~~~p~~g~~~~g-~~itGdvsAV~aAv~ 202 (225)
T 3gfh_A 150 YLVAPPL-EATYGIDAALKS-ADVQLATYVPPPSETNYSA-AFLTGSQAACKAACN 202 (225)
T ss_dssp EEEECHH-HHHHHHHHHHHH-SCCEEEEEECSCCTTSCEE-EEEESCSSSTTHHHH
T ss_pred EEEcCcH-HHHHHHHHHHhh-CCeEEEEEEcccCcCcEEE-EEEEEcHHHHHHHHH
Confidence 4678999 888888876643 467888 677777877777 778888888777664
No 107
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=22.73 E-value=91 Score=25.39 Aligned_cols=103 Identities=15% Similarity=0.037 Sum_probs=51.4
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEeeCCCCcccccccCCCCceEEEEeeeCCceeEEecCChHHHHHHHH
Q 022032 67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVSLAL 146 (303)
Q Consensus 67 ~~ILlTNDDGi~SpGI~aL~~aL~~~G~~dV~VVAP~~~qSg~g~siT~~~pl~v~~v~~~g~~~yaV~GTPaDCV~laL 146 (303)
|+||||=--|. -| ++|++.|.+.| ++|+++.-..++ ... + ....+++...++.. |.+ -+
T Consensus 1 MkilVtGatG~--iG-~~l~~~L~~~g-~~V~~~~R~~~~--~~~-~-~~~~~~~~~~D~~d---------~~~---~~- 59 (224)
T 3h2s_A 1 MKIAVLGATGR--AG-SAIVAEARRRG-HEVLAVVRDPQK--AAD-R-LGATVATLVKEPLV---------LTE---AD- 59 (224)
T ss_dssp CEEEEETTTSH--HH-HHHHHHHHHTT-CEEEEEESCHHH--HHH-H-TCTTSEEEECCGGG---------CCH---HH-
T ss_pred CEEEEEcCCCH--HH-HHHHHHHHHCC-CEEEEEEecccc--ccc-c-cCCCceEEeccccc---------ccH---hh-
Confidence 67999832221 12 67888998888 799888643211 100 0 11122222222211 111 11
Q ss_pred hccccCCCCCcEEEecCCCCCCC-ccccccchhHHHHHHHHHcCCCeeEEe
Q 022032 147 SGALFSWSKPLLVISGINRGSSC-GHHMFYSGVVAGAREALICGVPSLSIS 196 (303)
Q Consensus 147 ~~~l~~~~~PDLVVSGIN~G~N~-G~dv~ySGTVgAA~EA~l~GIPAIAvS 196 (303)
+ ..+|.||.=.-..... -..+..-||......+...|..-|-+|
T Consensus 60 ---~---~~~d~vi~~ag~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~S 104 (224)
T 3h2s_A 60 ---L---DSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFIL 104 (224)
T ss_dssp ---H---TTCSEEEECCCCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEEC
T ss_pred ---c---ccCCEEEECCccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEEe
Confidence 2 3578888643332111 123456677666555556775566665
No 108
>1sph_A Histidine-containing phosphocarrier protein HPR; phosphotransferase; 2.00A {Bacillus subtilis} SCOP: d.94.1.1 PDB: 1jem_A* 2hid_A 2hpr_A
Probab=22.16 E-value=45 Score=25.10 Aligned_cols=76 Identities=20% Similarity=0.229 Sum_probs=46.4
Q ss_pred eEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEeeCCCCcccccccCCCCceEEEEeeeCCce-eEEecCChHHHHHHHH
Q 022032 68 VLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGAT-AYEVSGTPVDCVSLAL 146 (303)
Q Consensus 68 ~ILlTNDDGi~SpGI~aL~~aL~~~G~~dV~VVAP~~~qSg~g~siT~~~pl~v~~v~~~g~~-~yaV~GTPaDCV~laL 146 (303)
.|-|+|..|+++.=...|++...+.. .+|+|.. ..+..-+.||---=.|.+. .|.. ...++|.=++-+.-+|
T Consensus 5 ~v~i~~~~GLHARpAa~~v~~a~~f~-s~I~i~~--~~~~vnaKSim~lm~L~~~----~g~~i~i~~~G~De~~A~~~l 77 (88)
T 1sph_A 5 TFKVTADSGIHARPATVLVQTASKYD-ADVNLEY--NGKTVNLKDIMGVMSLGIA----KGAEITISASGADENDALNAL 77 (88)
T ss_dssp EEEBCCTTCSCHHHHHHHHHHHTTSS-SEEEEEE--TTEEEETTCHHHHHHHCCC----TTCEEEEEEESTTHHHHHHHH
T ss_pred EEEEcCCCCccHHHHHHHHHHHhhCC-CeEEEEE--CCEEEehHhHHHHHhcCCC----CCCEEEEEEeCCCHHHHHHHH
Confidence 58999999999999999999999887 6898875 2333333332100000000 1222 2456777666666666
Q ss_pred hccc
Q 022032 147 SGAL 150 (303)
Q Consensus 147 ~~~l 150 (303)
..++
T Consensus 78 ~~l~ 81 (88)
T 1sph_A 78 EETM 81 (88)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
No 109
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=22.03 E-value=1.2e+02 Score=24.15 Aligned_cols=106 Identities=13% Similarity=0.071 Sum_probs=56.9
Q ss_pred CeEEEecCCCCCCccH-HHHHHHHHhcCCCcEEEEeeCCCCcccccccCCCCceEEEEeeeCCceeEEecCChHHHHHHH
Q 022032 67 PVLLVTNGDGIESPGL-VYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVSLA 145 (303)
Q Consensus 67 ~~ILlTNDDGi~SpGI-~aL~~aL~~~G~~dV~VVAP~~~qSg~g~siT~~~pl~v~~v~~~g~~~yaV~GTPaDCV~la 145 (303)
|+||||=--| +| ++|++.|.+.| ++|+++....++- - ... ..+.+.+.+|=+-.+.+.-+
T Consensus 4 ~~ilVtGatG----~iG~~l~~~l~~~g-~~V~~~~r~~~~~--~---~~~---------~~~~~~~~~D~~~~~~~~~~ 64 (206)
T 1hdo_A 4 KKIAIFGATG----QTGLTTLAQAVQAG-YEVTVLVRDSSRL--P---SEG---------PRPAHVVVGDVLQAADVDKT 64 (206)
T ss_dssp CEEEEESTTS----HHHHHHHHHHHHTT-CEEEEEESCGGGS--C---SSS---------CCCSEEEESCTTSHHHHHHH
T ss_pred CEEEEEcCCc----HHHHHHHHHHHHCC-CeEEEEEeChhhc--c---ccc---------CCceEEEEecCCCHHHHHHH
Confidence 7899994333 33 66888888888 7999886533211 0 000 01233344444433433333
Q ss_pred HhccccCCCCCcEEEecCCCCCC-CccccccchhHHHHHHHHHcCCCee-EEecc
Q 022032 146 LSGALFSWSKPLLVISGINRGSS-CGHHMFYSGVVAGAREALICGVPSL-SISLN 198 (303)
Q Consensus 146 L~~~l~~~~~PDLVVSGIN~G~N-~G~dv~ySGTVgAA~EA~l~GIPAI-AvS~~ 198 (303)
+ +.+|.||.=.-.... .-..+..-||......+..+|++-| -+|..
T Consensus 65 ~-------~~~d~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~ 112 (206)
T 1hdo_A 65 V-------AGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSA 112 (206)
T ss_dssp H-------TTCSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCG
T ss_pred H-------cCCCEEEECccCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeee
Confidence 3 247888863322111 1123556678777666666788644 45543
No 110
>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa}
Probab=21.73 E-value=2.7e+02 Score=28.89 Aligned_cols=40 Identities=23% Similarity=0.114 Sum_probs=30.8
Q ss_pred CCCCCeEEEecCCC-CCCccHHHHHHHHHhcCCCcEEEEeeCCC
Q 022032 63 DSSKPVLLVTNGDG-IESPGLVYLVEALVREGLYNVHVCAPQSD 105 (303)
Q Consensus 63 ~~~~~~ILlTNDDG-i~SpGI~aL~~aL~~~G~~dV~VVAP~~~ 105 (303)
+.++.-||++ || ++..-+..++++|++.| .+|.||+|...
T Consensus 536 ~grKVaILva--dG~fE~~El~~p~~aL~~aG-a~V~vVsp~~g 576 (688)
T 3ej6_A 536 ATLRVGVLST--TKGGSLDKAKALKEQLEKDG-LKVTVIAEYLA 576 (688)
T ss_dssp TTCEEEEECC--SSSSHHHHHHHHHHHHHHTT-CEEEEEESSCC
T ss_pred cCCEEEEEcc--CCCccHHHHHHHHHHHHHCC-CEEEEEeCCCC
Confidence 3344446665 56 66668899999999999 69999999864
No 111
>1ka5_A Phosphocarrier protein HPR; open faced beta-sandwich, structural proteomics in europe, spine, structural genomics, ligand transport; NMR {Staphylococcus aureus} SCOP: d.94.1.1 PDB: 1qr5_A 1txe_A
Probab=21.56 E-value=66 Score=24.21 Aligned_cols=33 Identities=12% Similarity=0.209 Sum_probs=29.9
Q ss_pred eEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEe
Q 022032 68 VLLVTNGDGIESPGLVYLVEALVREGLYNVHVCA 101 (303)
Q Consensus 68 ~ILlTNDDGi~SpGI~aL~~aL~~~G~~dV~VVA 101 (303)
.|-|+|..|+++.=...|++...+.. .+|+|..
T Consensus 5 ~v~i~~~~GLHARpAa~~v~~a~~f~-s~I~i~~ 37 (88)
T 1ka5_A 5 SYVIIDETGIHARPATMLVQTASKFD-SDIQLEY 37 (88)
T ss_dssp EEEBCCTTCSCHHHHHHHHHHHHHHS-SEEEEEE
T ss_pred EEEEcCCCCccHHHHHHHHHHHhhCC-CeEEEEE
Confidence 58999999999999999999999987 6999875
No 112
>1y51_A Phosphocarrier protein HPR; bacillus stearothermophilus HPR F29W mutant, transport protein; 1.65A {Geobacillus stearothermophilus} PDB: 1y50_A 1y4y_A 2nzu_L* 1rzr_T* 2nzv_L* 2oen_L* 2fep_S* 3oqm_S* 3oqn_S* 3oqo_S*
Probab=21.54 E-value=54 Score=24.66 Aligned_cols=33 Identities=15% Similarity=0.191 Sum_probs=29.8
Q ss_pred eEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEe
Q 022032 68 VLLVTNGDGIESPGLVYLVEALVREGLYNVHVCA 101 (303)
Q Consensus 68 ~ILlTNDDGi~SpGI~aL~~aL~~~G~~dV~VVA 101 (303)
.|-|+|..|+++.=...|++...+.. .+|+|..
T Consensus 5 ~v~i~~~~GlHARpAa~~v~~a~~f~-s~I~i~~ 37 (88)
T 1y51_A 5 TFKVVSDSGIHARPATILVQTASKWN-SEIQLEY 37 (88)
T ss_dssp EEEBCCTTCSCHHHHHHHHHHHHTSS-SEEEEEE
T ss_pred EEEEcCCCCccHHHHHHHHHHHhhCC-CeEEEEE
Confidence 58999999999999999999999987 6898875
No 113
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=21.53 E-value=1.2e+02 Score=26.39 Aligned_cols=33 Identities=30% Similarity=0.482 Sum_probs=24.2
Q ss_pred CCCeEEEecCCCCCCccH-HHHHHHHHhcCCCcEEEEee
Q 022032 65 SKPVLLVTNGDGIESPGL-VYLVEALVREGLYNVHVCAP 102 (303)
Q Consensus 65 ~~~~ILlTNDDGi~SpGI-~aL~~aL~~~G~~dV~VVAP 102 (303)
.+|+||||=--| +| ++|++.|.+.| ++|+++.-
T Consensus 4 ~~~~vlVTGatG----~iG~~l~~~L~~~G-~~V~~~~r 37 (341)
T 3enk_A 4 TKGTILVTGGAG----YIGSHTAVELLAHG-YDVVIADN 37 (341)
T ss_dssp SSCEEEEETTTS----HHHHHHHHHHHHTT-CEEEEECC
T ss_pred CCcEEEEecCCc----HHHHHHHHHHHHCC-CcEEEEec
Confidence 457899994322 33 67889999998 78888764
No 114
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=21.42 E-value=50 Score=27.92 Aligned_cols=25 Identities=20% Similarity=0.223 Sum_probs=18.4
Q ss_pred chhHHHHHHHHHcCCCeeEEecccC
Q 022032 176 SGVVAGAREALICGVPSLSISLNWK 200 (303)
Q Consensus 176 SGTVgAA~EA~l~GIPAIAvS~~~~ 200 (303)
.||=+..+.....|||++.++....
T Consensus 295 ggTDa~~~~~~~~Giptv~~G~g~~ 319 (354)
T 2wzn_A 295 TGTDANVMQINKEGVATAVLSIPIR 319 (354)
T ss_dssp CSSHHHHHHTSTTCCEEEEEEEEEB
T ss_pred cccHHHHHHHhcCCCCEEEECcccC
Confidence 4676666655668999999997643
No 115
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=21.36 E-value=77 Score=24.38 Aligned_cols=38 Identities=13% Similarity=-0.096 Sum_probs=25.0
Q ss_pred CCcEEEecCCCCCCCccccccchhHHHHHHHHHcCCCeeEEecc
Q 022032 155 KPLLVISGINRGSSCGHHMFYSGVVAGAREALICGVPSLSISLN 198 (303)
Q Consensus 155 ~PDLVVSGIN~G~N~G~dv~ySGTVgAA~EA~l~GIPAIAvS~~ 198 (303)
+|||||..++.....|.++ -..+......+|.|.+|..
T Consensus 83 ~~dliilD~~l~~~~g~~~------~~~lr~~~~~~~ii~ls~~ 120 (157)
T 3hzh_A 83 NIDIVTLXITMPKMDGITC------LSNIMEFDKNARVIMISAL 120 (157)
T ss_dssp GCCEEEECSSCSSSCHHHH------HHHHHHHCTTCCEEEEESC
T ss_pred CCCEEEEeccCCCccHHHH------HHHHHhhCCCCcEEEEecc
Confidence 6899999998866444432 2222333467899999864
No 116
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=21.08 E-value=94 Score=27.45 Aligned_cols=38 Identities=24% Similarity=0.353 Sum_probs=29.7
Q ss_pred eEEEec---CCCCCCccHHHHHHHHHhcCCCcEEEEeeCCCC
Q 022032 68 VLLVTN---GDGIESPGLVYLVEALVREGLYNVHVCAPQSDK 106 (303)
Q Consensus 68 ~ILlTN---DDGi~SpGI~aL~~aL~~~G~~dV~VVAP~~~q 106 (303)
-|||+| =||++-.=+...++.|++.| ++|.+++|...+
T Consensus 27 ~ill~~~~~~dG~e~~E~~~p~~vL~~aG-~~V~~~S~~~g~ 67 (242)
T 3l3b_A 27 AVILAGCGHMDGSEIREAVLVMLELDRHN-VNFKCFAPNKNQ 67 (242)
T ss_dssp EEECCCSSTTTSCCHHHHHHHHHHHHHTT-CEEEEEECSSBC
T ss_pred EEEEecCCCCCCeeHHHHHHHHHHHHHCC-CEEEEEecCCCc
Confidence 355553 16787777888899999999 799999998654
No 117
>1kkl_H Phosphocarrier protein HPR; phosphorylation, protein kinase, bacteria, protein/protein interaction, transferase; 2.80A {Bacillus subtilis} SCOP: d.94.1.1 PDB: 1kkm_H*
Probab=20.96 E-value=63 Score=25.22 Aligned_cols=38 Identities=18% Similarity=0.206 Sum_probs=31.1
Q ss_pred CCCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEe
Q 022032 63 DSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCA 101 (303)
Q Consensus 63 ~~~~~~ILlTNDDGi~SpGI~aL~~aL~~~G~~dV~VVA 101 (303)
.+..-.+-|+|..|+++.=...|++...+.. .+|+|.-
T Consensus 12 ~~~~~~v~I~n~~GLHARPAa~~v~~A~~f~-s~I~i~~ 49 (100)
T 1kkl_H 12 SMAQKTFKVTADSGIHARPATVLVQTASKYD-ADVNLEY 49 (100)
T ss_dssp ---CEEEEBCCTTCSCHHHHHHHHHHHHTCS-SEEEEEE
T ss_pred ceEEEEEEEcCCCccCHHHHHHHHHHHhhCC-CeEEEEE
Confidence 3445569999999999999999999999987 6888875
No 118
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=20.88 E-value=1.5e+02 Score=25.10 Aligned_cols=89 Identities=7% Similarity=-0.060 Sum_probs=46.1
Q ss_pred CCCCeEEEecCCCCCCccH-HHHHHHHHhcCCCcEEEEeeCCCCcccccccCCCCceEEEEeeeCCceeEEecCChHHHH
Q 022032 64 SSKPVLLVTNGDGIESPGL-VYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCV 142 (303)
Q Consensus 64 ~~~~~ILlTNDDGi~SpGI-~aL~~aL~~~G~~dV~VVAP~~~qSg~g~siT~~~pl~v~~v~~~g~~~yaV~GTPaDCV 142 (303)
.+..+||||=--|. .|| +++++.|.+.| ++|+++.-.. ......-.+.+ +........+.+|=+=.+.+
T Consensus 5 l~~k~vlVTGasg~--~GIG~~ia~~l~~~G-~~V~~~~r~~--~~~~~~~~~~~-----~~~~~~~~~~~~D~~~~~~v 74 (266)
T 3oig_A 5 LEGRNIVVMGVANK--RSIAWGIARSLHEAG-ARLIFTYAGE--RLEKSVHELAG-----TLDRNDSIILPCDVTNDAEI 74 (266)
T ss_dssp CTTCEEEEECCCST--TSHHHHHHHHHHHTT-CEEEEEESSG--GGHHHHHHHHH-----TSSSCCCEEEECCCSSSHHH
T ss_pred cCCCEEEEEcCCCC--CcHHHHHHHHHHHCC-CEEEEecCch--HHHHHHHHHHH-----hcCCCCceEEeCCCCCHHHH
Confidence 34567999943322 356 57899999999 6888875331 10000000000 00000133456665555556
Q ss_pred HHHHhccccCCCCCcEEEec
Q 022032 143 SLALSGALFSWSKPLLVISG 162 (303)
Q Consensus 143 ~laL~~~l~~~~~PDLVVSG 162 (303)
.-.+..+...+.++|.||.-
T Consensus 75 ~~~~~~~~~~~g~id~li~~ 94 (266)
T 3oig_A 75 ETCFASIKEQVGVIHGIAHC 94 (266)
T ss_dssp HHHHHHHHHHHSCCCEEEEC
T ss_pred HHHHHHHHHHhCCeeEEEEc
Confidence 55555443222478988863
No 119
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=20.87 E-value=54 Score=26.07 Aligned_cols=34 Identities=12% Similarity=0.264 Sum_probs=24.6
Q ss_pred CCeEEEecCCCCCCcc-HHHHHHHHHhcCCCcEEEE
Q 022032 66 KPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHVC 100 (303)
Q Consensus 66 ~~~ILlTNDDGi~SpG-I~aL~~aL~~~G~~dV~VV 100 (303)
.-+|||. ||.+.+=+ +.++.+.|++.|...|.++
T Consensus 83 gk~VllV-DDvitTG~Tl~~a~~~L~~~ga~~v~~~ 117 (153)
T 1vdm_A 83 DKRVVIV-DDVSDTGKTLEVVIEEVKKLGAKEIKIA 117 (153)
T ss_dssp TCEEEEE-EEEESSCHHHHHHHHHHHTTTBSEEEEE
T ss_pred CCEEEEE-ecccCChHHHHHHHHHHHHcCCCEEEEE
Confidence 4568888 99887633 6788899999885555343
No 120
>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*
Probab=20.66 E-value=1.4e+02 Score=25.97 Aligned_cols=35 Identities=20% Similarity=0.301 Sum_probs=26.1
Q ss_pred CCCCCeEEEecCCCCC-CccH-HHHHHHHHhcCCCcEEEEe
Q 022032 63 DSSKPVLLVTNGDGIE-SPGL-VYLVEALVREGLYNVHVCA 101 (303)
Q Consensus 63 ~~~~~~ILlTNDDGi~-SpGI-~aL~~aL~~~G~~dV~VVA 101 (303)
..+..++||| |-. +-|| +++++.|.+.| ++|+++.
T Consensus 5 ~l~~k~~lVT---Gas~~~GIG~aia~~la~~G-~~V~~~~ 41 (297)
T 1d7o_A 5 DLRGKRAFIA---GIADDNGYGWAVAKSLAAAG-AEILVGT 41 (297)
T ss_dssp CCTTCEEEEE---CCSSSSSHHHHHHHHHHHTT-CEEEEEE
T ss_pred ccCCCEEEEE---CCCCCCChHHHHHHHHHHCC-CeEEEee
Confidence 3445579999 432 3677 78999999999 7898875
No 121
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=20.62 E-value=91 Score=23.14 Aligned_cols=39 Identities=8% Similarity=0.074 Sum_probs=23.7
Q ss_pred CCCcEEEecCCCCCCCccccccchhHHHHHHHHHcCCCeeEEecc
Q 022032 154 SKPLLVISGINRGSSCGHHMFYSGVVAGAREALICGVPSLSISLN 198 (303)
Q Consensus 154 ~~PDLVVSGIN~G~N~G~dv~ySGTVgAA~EA~l~GIPAIAvS~~ 198 (303)
.+|||||..++...-.|.++ -..+......+|.|.+|..
T Consensus 48 ~~~dlvi~d~~l~~~~g~~~------~~~l~~~~~~~~ii~ls~~ 86 (143)
T 3jte_A 48 NSIDVVITDMKMPKLSGMDI------LREIKKITPHMAVIILTGH 86 (143)
T ss_dssp TTCCEEEEESCCSSSCHHHH------HHHHHHHCTTCEEEEEECT
T ss_pred CCCCEEEEeCCCCCCcHHHH------HHHHHHhCCCCeEEEEECC
Confidence 47999999988765444322 1112223457888888764
No 122
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=20.19 E-value=1.4e+02 Score=25.19 Aligned_cols=35 Identities=9% Similarity=0.129 Sum_probs=25.4
Q ss_pred CCCCeEEEecCCCCCCccH-HHHHHHHHhcCCCc-EEEEeeC
Q 022032 64 SSKPVLLVTNGDGIESPGL-VYLVEALVREGLYN-VHVCAPQ 103 (303)
Q Consensus 64 ~~~~~ILlTNDDGi~SpGI-~aL~~aL~~~G~~d-V~VVAP~ 103 (303)
.+..+|||| |- +-|| +++++.|.+.| ++ |+++.-.
T Consensus 3 l~~k~vlVt---Ga-s~gIG~~~a~~l~~~G-~~~v~~~~r~ 39 (254)
T 1sby_A 3 LTNKNVIFV---AA-LGGIGLDTSRELVKRN-LKNFVILDRV 39 (254)
T ss_dssp CTTCEEEEE---TT-TSHHHHHHHHHHHHTC-CSEEEEEESS
T ss_pred CCCcEEEEE---CC-CChHHHHHHHHHHHCC-CcEEEEEecC
Confidence 345679999 43 4577 78999999999 56 7777644
No 123
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=20.07 E-value=1e+02 Score=22.76 Aligned_cols=39 Identities=15% Similarity=0.049 Sum_probs=23.4
Q ss_pred CCCcEEEecCCCCCCCccccccchhHHHHHHH--HHcCCCeeEEecc
Q 022032 154 SKPLLVISGINRGSSCGHHMFYSGVVAGAREA--LICGVPSLSISLN 198 (303)
Q Consensus 154 ~~PDLVVSGIN~G~N~G~dv~ySGTVgAA~EA--~l~GIPAIAvS~~ 198 (303)
.+||+||..++...-.|.++ -..+.. ....+|.|.+|..
T Consensus 50 ~~~dlii~d~~l~~~~g~~~------~~~l~~~~~~~~~pii~~s~~ 90 (142)
T 3cg4_A 50 GFSGVVLLDIMMPGMDGWDT------IRAILDNSLEQGIAIVMLTAK 90 (142)
T ss_dssp CCCEEEEEESCCSSSCHHHH------HHHHHHTTCCTTEEEEEEECT
T ss_pred cCCCEEEEeCCCCCCCHHHH------HHHHHhhcccCCCCEEEEECC
Confidence 36999999988764333221 111222 2356889999865
No 124
>1fsg_A HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: PRP 9DG; 1.05A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1qk3_A* 1qk4_A* 1qk5_A* 1dbr_A
Probab=20.03 E-value=72 Score=27.94 Aligned_cols=42 Identities=14% Similarity=0.139 Sum_probs=32.1
Q ss_pred CCeEEEecCCCCCCcc-HHHHHHHHHhcCCCcEEEEeeCCCCcc
Q 022032 66 KPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHVCAPQSDKSV 108 (303)
Q Consensus 66 ~~~ILlTNDDGi~SpG-I~aL~~aL~~~G~~dV~VVAP~~~qSg 108 (303)
.-+|||. ||.+.+=+ |+++.+.|++.|...|.++++..-+++
T Consensus 142 Gk~VLIV-DDii~TG~Tl~~a~~~L~~~ga~~V~vavl~~k~~~ 184 (233)
T 1fsg_A 142 DKHVLIV-EDIVDTGFTLTEFGERLKAVGPKSMRIATLVEKRTD 184 (233)
T ss_dssp TCEEEEE-EEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECCT
T ss_pred CCEEEEE-ccccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCcc
Confidence 4468888 99998743 788999999998777888887654443
No 125
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=20.02 E-value=73 Score=23.16 Aligned_cols=39 Identities=15% Similarity=-0.016 Sum_probs=24.8
Q ss_pred CCCcEEEecCCCCCCCccccccchhHHHHHHHH--HcCCCeeEEecc
Q 022032 154 SKPLLVISGINRGSSCGHHMFYSGVVAGAREAL--ICGVPSLSISLN 198 (303)
Q Consensus 154 ~~PDLVVSGIN~G~N~G~dv~ySGTVgAA~EA~--l~GIPAIAvS~~ 198 (303)
.+|||||..++.....|.++ -..+... ...+|.|.+|..
T Consensus 46 ~~~dlii~D~~l~~~~g~~~------~~~l~~~~~~~~~~ii~~s~~ 86 (127)
T 3i42_A 46 RGYDAVFIDLNLPDTSGLAL------VKQLRALPMEKTSKFVAVSGF 86 (127)
T ss_dssp SCCSEEEEESBCSSSBHHHH------HHHHHHSCCSSCCEEEEEECC
T ss_pred cCCCEEEEeCCCCCCCHHHH------HHHHHhhhccCCCCEEEEECC
Confidence 46999999998765444322 1222222 457899999865
Done!