Your job contains 1 sequence.
>022044
MSNSLYSFENDSLPKVRKPYTITKQREKWTEEEHQRFLDALKMYGRGWRQIEGTKTAVQI
RSHAQKFFSKVVRESNGSSESSIMPIEIPPPRPKRKPVHPYPRKSVDSLKATSVSNQQEN
FTSSNALVSDKDRQSPTSVVSAFNSDTLGCAASDQQNGCSSPTSCTTEMHSVNLLPIEKE
NEYVTSISFPKEEKISTLPAHLSASSNVEELASVSKDSVYPKGDAAAAPSCTSIKLFGRT
VLVSDSWKPYSLGADSYKSPISKSSQENLDVDKKILSSQPHQSIWIHIYYLGWFLAIVIH
PHI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 022044
(303 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2014114 - symbol:EPR1 "EARLY-PHYTOCHROME-RESPO... 287 7.4e-40 2
TAIR|locus:2169135 - symbol:RVE2 "REVEILLE 2" species:370... 273 4.3e-32 2
TAIR|locus:2167210 - symbol:RVE1 "REVEILLE 1" species:370... 289 6.9e-32 2
TAIR|locus:504955668 - symbol:AT3G10113 species:3702 "Ara... 287 4.7e-29 2
TAIR|locus:2200970 - symbol:LHY "LATE ELONGATED HYPOCOTYL... 256 1.1e-22 2
TAIR|locus:2044345 - symbol:CCA1 "circadian clock associa... 254 7.1e-21 1
TAIR|locus:2151251 - symbol:LCL1 "LHY/CCA1-like 1" specie... 207 1.7e-20 2
TAIR|locus:2025411 - symbol:ASG4 "ALTERED SEED GERMINATIO... 235 9.2e-20 1
TAIR|locus:2149589 - symbol:AT5G52660 species:3702 "Arabi... 225 1.1e-18 1
TAIR|locus:2124928 - symbol:AT4G01280 species:3702 "Arabi... 224 1.4e-18 1
TAIR|locus:2075049 - symbol:RVE8 "REVEILLE 8" species:370... 223 1.7e-18 1
DICTYBASE|DDB_G0288783 - symbol:mybG "myb domain-containi... 220 1.3e-17 1
TAIR|locus:2042872 - symbol:AT2G38090 species:3702 "Arabi... 134 1.6e-06 1
TAIR|locus:2150149 - symbol:AT5G01200 species:3702 "Arabi... 132 2.0e-06 1
TAIR|locus:2154508 - symbol:AT5G58900 species:3702 "Arabi... 131 3.3e-06 1
TAIR|locus:2171519 - symbol:AT5G47390 species:3702 "Arabi... 118 7.2e-06 2
UNIPROTKB|Q8S9H7 - symbol:DIVARICATA "Transcription facto... 127 1.1e-05 1
TAIR|locus:2166459 - symbol:AT5G05790 species:3702 "Arabi... 126 1.1e-05 1
DICTYBASE|DDB_G0274463 - symbol:mybJ "myb domain-containi... 131 1.7e-05 1
TAIR|locus:2175478 - symbol:AT5G04760 species:3702 "Arabi... 120 2.6e-05 1
DICTYBASE|DDB_G0289151 - symbol:mybI "myb domain-containi... 129 4.0e-05 1
TAIR|locus:2074723 - symbol:AT3G11280 species:3702 "Arabi... 119 6.5e-05 1
DICTYBASE|DDB_G0271670 - symbol:DDB_G0271670 species:4468... 121 8.1e-05 1
TAIR|locus:2027181 - symbol:AT1G74840 species:3702 "Arabi... 117 0.00011 1
TAIR|locus:2133667 - symbol:AT4G09450 species:3702 "Arabi... 113 0.00014 1
TAIR|locus:2075775 - symbol:AT3G10580 species:3702 "Arabi... 116 0.00018 1
TAIR|locus:2171711 - symbol:AT5G23650 species:3702 "Arabi... 117 0.00019 1
TAIR|locus:2020653 - symbol:AT1G70000 species:3702 "Arabi... 113 0.00032 1
TAIR|locus:2151621 - symbol:AT5G61620 species:3702 "Arabi... 114 0.00038 1
TAIR|locus:2159607 - symbol:AT5G08520 species:3702 "Arabi... 112 0.00056 1
>TAIR|locus:2014114 [details] [associations]
symbol:EPR1 "EARLY-PHYTOCHROME-RESPONSIVE1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009651 "response to salt stress" evidence=IEP]
[GO:0009723 "response to ethylene stimulus" evidence=IEP]
[GO:0046686 "response to cadmium ion" evidence=IEP] [GO:0007623
"circadian rhythm" evidence=IEP] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 EMBL:CP002684
GO:GO:0046686 GO:GO:0009723 GO:GO:0003677 GO:GO:0007623
GO:GO:0009651 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:AC013354 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 IPI:IPI00891668
RefSeq:NP_001117304.1 UniGene:At.27131 ProteinModelPortal:B3H5A8
SMR:B3H5A8 EnsemblPlants:AT1G18330.2 GeneID:838413
KEGG:ath:AT1G18330 TAIR:At1g18330 eggNOG:NOG263004
HOGENOM:HOG000064617 OMA:NSCTSDI PhylomeDB:B3H5A8
ProtClustDB:CLSN2682175 Genevestigator:B3H5A8 Uniprot:B3H5A8
Length = 372
Score = 287 (106.1 bits), Expect = 7.4e-40, Sum P(2) = 7.4e-40
Identities = 53/75 (70%), Positives = 66/75 (88%)
Query: 11 DSLPKVRKPYTITKQREKWTEEEHQRFLDALKMYGRGWRQIE---GTKTAVQIRSHAQKF 67
+++ KVRKPYT+TKQREKW+EEEH RFL+A+K+YGRGWRQI+ GTKTAVQIRSHAQKF
Sbjct: 61 ENVVKVRKPYTVTKQREKWSEEEHDRFLEAIKLYGRGWRQIQEHIGTKTAVQIRSHAQKF 120
Query: 68 FSKVVRESNGSSESS 82
FSK+ +E++ SE S
Sbjct: 121 FSKMAQEADSRSEGS 135
Score = 154 (59.3 bits), Expect = 7.4e-40, Sum P(2) = 7.4e-40
Identities = 48/161 (29%), Positives = 84/161 (52%)
Query: 125 NALVSDKDRQSPTSVVSAFNSDTLGCAASDQQNGCSSPTSCTTEMHSVNLLPIEKENEYV 184
N +K +SPTSV+S+F S+ DQ N CSSP SCT+++ S+ I+K+N Y
Sbjct: 169 NLSAMEKGTKSPTSVLSSFGSE-------DQVNRCSSPNSCTSDIQSIGATSIDKKNNYT 221
Query: 185 TSIS-FPKEEKISTLPAHLSASSNVEELASVSKDSVYPKG---DAAAAPSCTSIKLFGRT 240
TS F + I + P +S+ + ++ V+++S P D +C G
Sbjct: 222 TSKQPFKDDSDIGSTP--ISSITLFGKIVLVAEESHKPSSYNDDDLKQMTCQENHYSGML 279
Query: 241 VLVSDS---WKPYSLGADSYKSPISKSSQENLDVDKKILSS 278
V + S W+ + G++++ S ++++S ENL+ + +SS
Sbjct: 280 VDTNLSLGVWETFCTGSNAFGS-VTEAS-ENLEKSAEPISS 318
Score = 46 (21.3 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 106 VDSLKATSVSNQQENFTSSNALVSDKDRQS-PTSVVSAFNSDTL 148
+ S+ ATS+ + TS D D S P S ++ F L
Sbjct: 206 IQSIGATSIDKKNNYTTSKQPFKDDSDIGSTPISSITLFGKIVL 249
>TAIR|locus:2169135 [details] [associations]
symbol:RVE2 "REVEILLE 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0009723
"response to ethylene stimulus" evidence=IEP;RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP;RCA] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP;RCA] [GO:0009753
"response to jasmonic acid stimulus" evidence=IEP;RCA] [GO:0007623
"circadian rhythm" evidence=IEP;RCA] [GO:0009845 "seed germination"
evidence=IMP] [GO:0009909 "regulation of flower development"
evidence=IMP] [GO:0048574 "long-day photoperiodism, flowering"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0009737 EMBL:CP002688 GO:GO:0009733
GO:GO:0009753 GO:GO:0009723 GO:GO:0003677 GO:GO:0007623
GO:GO:0009651 GO:GO:0003700 GO:GO:0003682 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 GO:GO:0009845
GO:GO:0009909 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 IPI:IPI00528444
RefSeq:NP_198542.1 UniGene:At.30502 UniGene:At.68589
ProteinModelPortal:F4K5X6 SMR:F4K5X6 PRIDE:F4K5X6
EnsemblPlants:AT5G37260.1 GeneID:833700 KEGG:ath:AT5G37260
OMA:SSHTEES ArrayExpress:F4K5X6 Uniprot:F4K5X6
Length = 287
Score = 273 (101.2 bits), Expect = 4.3e-32, Sum P(2) = 4.3e-32
Identities = 55/83 (66%), Positives = 65/83 (78%)
Query: 2 SNSLYSFENDSLPKVRKPYTITKQREKWTEEEHQRFLDALKMYGRGWRQIE---GTKTAV 58
S+ L S + K RKPYTITKQREKWTE EH++F++ALK+YGR WR+IE GTKTAV
Sbjct: 12 SDELISSSDAFYLKTRKPYTITKQREKWTEAEHEKFVEALKLYGRAWRRIEEHVGTKTAV 71
Query: 59 QIRSHAQKFFSKVVRESNGSSES 81
QIRSHAQKFF+KV R+ SSES
Sbjct: 72 QIRSHAQKFFTKVARDFGVSSES 94
Score = 94 (38.1 bits), Expect = 4.3e-32, Sum P(2) = 4.3e-32
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 123 SSNALVSDKDRQSPTSVVSAFNSDTLGCAASDQQNGCSSPTSCTTEMHSVNL 174
+ + L+ D+D +SPTSV+SA SD LG S+ N S+ S TE S++L
Sbjct: 128 TGSKLIQDEDNRSPTSVLSAHGSDGLGSIGSNSPNSSSAELSSHTE-ESLSL 178
Score = 56 (24.8 bits), Expect = 4.1e-28, Sum P(2) = 4.1e-28
Identities = 19/69 (27%), Positives = 41/69 (59%)
Query: 178 EKENEYVTSI-SFPKEEKISTLPAHLSASSNVEELASVSKDSVYPKGDAAAAPSCTSIKL 236
+++N TS+ S + + ++ ++ S +S+ EL+S +++S+ + A + S+KL
Sbjct: 135 DEDNRSPTSVLSAHGSDGLGSIGSN-SPNSSSAELSSHTEESL-----SLEAETKQSLKL 188
Query: 237 FGRTVLVSD 245
FG+T +V D
Sbjct: 189 FGKTFVVGD 197
>TAIR|locus:2167210 [details] [associations]
symbol:RVE1 "REVEILLE 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IMP] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0007623 "circadian rhythm" evidence=IEP;RCA] [GO:0009734 "auxin
mediated signaling pathway" evidence=IMP] [GO:0009851 "auxin
biosynthetic process" evidence=IMP] [GO:0010600 "regulation of
auxin biosynthetic process" evidence=IMP] [GO:0009651 "response to
salt stress" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=RCA] [GO:0009739 "response to gibberellin stimulus"
evidence=RCA] [GO:0009751 "response to salicylic acid stimulus"
evidence=RCA] [GO:0009753 "response to jasmonic acid stimulus"
evidence=RCA] [GO:0048574 "long-day photoperiodism, flowering"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 EMBL:CP002688 GO:GO:0009734 GO:GO:0003677
GO:GO:0007623 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009851 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 GO:GO:0010600 IPI:IPI00524365
RefSeq:NP_568344.2 UniGene:At.21718 ProteinModelPortal:F4KGY6
SMR:F4KGY6 EnsemblPlants:AT5G17300.1 GeneID:831595
KEGG:ath:AT5G17300 OMA:TKERERW Uniprot:F4KGY6
Length = 387
Score = 289 (106.8 bits), Expect = 6.9e-32, Sum P(2) = 6.9e-32
Identities = 54/76 (71%), Positives = 65/76 (85%)
Query: 10 NDSLPKVRKPYTITKQREKWTEEEHQRFLDALKMYGRGWRQIE---GTKTAVQIRSHAQK 66
ND PKVRKPYTITK+RE+WT+EEH++F++ALK+YGR WR+IE G+KTAVQIRSHAQK
Sbjct: 39 NDYAPKVRKPYTITKERERWTDEEHKKFVEALKLYGRAWRRIEEHVGSKTAVQIRSHAQK 98
Query: 67 FFSKVVRESNGSSESS 82
FFSKV RE+ G SS
Sbjct: 99 FFSKVAREATGGDGSS 114
Score = 76 (31.8 bits), Expect = 6.9e-32, Sum P(2) = 6.9e-32
Identities = 42/150 (28%), Positives = 63/150 (42%)
Query: 122 TSSNALVSDKDRQSPTSVVSAFNSDTLGCAASDQQNGCSSPTSCTTEMHSVNLLP-IEKE 180
TS + S++D QSPTSV+S S+ L S N SP S + ++ +E
Sbjct: 144 TSRSVSPSERDTQSPTSVLSTVGSEALCSLDSSSPNRSLSPVSSASPPAALTTTANAPEE 203
Query: 181 NEYVTSISFPKEEKISTLPAHLSASSNVEELASVSKDSVYPKGDAAAAPSCTSIKLFGRT 240
E + FP E L+ S+++E S ++ K + S S L T
Sbjct: 204 LETLKLELFPSERL-------LNRESSIKEPTKQSL-KLFGK-TVLVSDSGMSSSLTTST 254
Query: 241 VLVSDSWKPYSLGADSYKS-PISKSSQENL 269
S +P S K+ PI ++SQE L
Sbjct: 255 YCKSPI-QPLPRKLSSSKTLPIIRNSQEEL 283
>TAIR|locus:504955668 [details] [associations]
symbol:AT3G10113 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002686 GO:GO:0006355 GO:GO:0003677 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
UniGene:At.27131 IPI:IPI00534114 RefSeq:NP_683543.1
UniGene:At.53244 ProteinModelPortal:F4J2J6 SMR:F4J2J6
EnsemblPlants:AT3G10113.1 GeneID:820173 KEGG:ath:AT3G10113
PhylomeDB:F4J2J6 Uniprot:F4J2J6
Length = 336
Score = 287 (106.1 bits), Expect = 4.7e-29, Sum P(2) = 4.7e-29
Identities = 53/75 (70%), Positives = 66/75 (88%)
Query: 11 DSLPKVRKPYTITKQREKWTEEEHQRFLDALKMYGRGWRQIE---GTKTAVQIRSHAQKF 67
+++ KVRKPYT+TKQREKW+EEEH RFL+A+K+YGRGWRQI+ GTKTAVQIRSHAQKF
Sbjct: 50 ENVVKVRKPYTVTKQREKWSEEEHDRFLEAIKLYGRGWRQIQEHIGTKTAVQIRSHAQKF 109
Query: 68 FSKVVRESNGSSESS 82
FSK+ +E++ SE S
Sbjct: 110 FSKMAQEADSRSEGS 124
Score = 51 (23.0 bits), Expect = 4.7e-29, Sum P(2) = 4.7e-29
Identities = 32/146 (21%), Positives = 61/146 (41%)
Query: 125 NALVSDKDRQSPTSVVSAFNSDTLGCAASDQQNGCSSPTSCTTEMHSVNLLP----IEKE 180
N +K +SPTSV+S+F S+ + +Q +T + S+ L + +E
Sbjct: 158 NLSAMEKGTKSPTSVLSSFGSEDQNNYTTSKQPFKDDSDIGSTPISSITLFGKIVLVAEE 217
Query: 181 NEYVTSISFPKEEKISTLPAHLSASSNVEELASVSKDSVYPKG-DAAAAPSCTSIKLFGR 239
+ +S + ++++ H S V+ S+ + G +A + + S L
Sbjct: 218 SHKPSSYNDDDLKQMTCQENHYSGML-VDTNLSLGVWETFCTGSNAFGSVTEASENLEKS 276
Query: 240 TVLVSDSWKPYS-LGADSYKSPISKS 264
+S SWK S L +P++ S
Sbjct: 277 AEPISSSWKRLSSLEKQGSCNPVNAS 302
>TAIR|locus:2200970 [details] [associations]
symbol:LHY "LATE ELONGATED HYPOCOTYL" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA;TAS] [GO:0009651 "response to salt stress"
evidence=IEP;RCA] [GO:0009723 "response to ethylene stimulus"
evidence=IEP;RCA] [GO:0009733 "response to auxin stimulus"
evidence=IEP;RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP;RCA] [GO:0009739 "response to gibberellin stimulus"
evidence=IEP;RCA] [GO:0009751 "response to salicylic acid stimulus"
evidence=IEP;RCA] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IEP;RCA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0048574 "long-day photoperiodism, flowering"
evidence=IGI;RCA] [GO:0042752 "regulation of circadian rhythm"
evidence=RCA;IMP] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0007623 "circadian rhythm"
evidence=IGI;RCA] [GO:0009409 "response to cold" evidence=IGI]
[GO:0042754 "negative regulation of circadian rhythm" evidence=IMP]
[GO:0009639 "response to red or far red light" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634
GO:GO:0046686 GO:GO:0009733 GO:GO:0009753 GO:GO:0009723
GO:GO:0007623 GO:GO:0009651 GO:GO:0009409 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 GO:GO:0009751 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0044212 GO:GO:0009739 GO:GO:0043433
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 GO:GO:0048574 HOGENOM:HOG000084594 GO:GO:0042754
EMBL:AC007323 EMBL:AJ006404 EMBL:AY519507 EMBL:AK316728
EMBL:AK316829 IPI:IPI00517620 RefSeq:NP_001030924.1
RefSeq:NP_171614.1 RefSeq:NP_849568.1 UniGene:At.25466
ProteinModelPortal:Q6R0H1 SMR:Q6R0H1 IntAct:Q6R0H1 STRING:Q6R0H1
PRIDE:Q6R0H1 EnsemblPlants:AT1G01060.1 EnsemblPlants:AT1G01060.2
EnsemblPlants:AT1G01060.3 GeneID:839341 KEGG:ath:AT1G01060
GeneFarm:1653 TAIR:At1g01060 eggNOG:NOG269073 InParanoid:Q6R0H1
KO:K12133 OMA:QKFFTKL PhylomeDB:Q6R0H1 ProtClustDB:CLSN2682827
Uniprot:Q6R0H1
Length = 645
Score = 256 (95.2 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 47/66 (71%), Positives = 59/66 (89%)
Query: 13 LPKVRKPYTITKQREKWTEEEHQRFLDALKMYGRGWRQIE---GTKTAVQIRSHAQKFFS 69
L K RKPYTITKQRE+WTE+EH+RFL+AL++YGR W++IE GTKTAVQIRSHAQKFF+
Sbjct: 11 LAKARKPYTITKQRERWTEDEHERFLEALRLYGRAWQRIEEHIGTKTAVQIRSHAQKFFT 70
Query: 70 KVVRES 75
K+ +E+
Sbjct: 71 KLEKEA 76
Score = 39 (18.8 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 113 SVSNQQENFTSSNALVSDKDRQSPTSVVSAFNSDTLG 149
+V N Q F N + D++ S + S+ +SD G
Sbjct: 393 TVENTQP-FEKQNTALQDQNLASKSPASSSDDSDETG 428
Score = 38 (18.4 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 19/84 (22%), Positives = 35/84 (41%)
Query: 119 ENFTSSNALVSDKDRQSPTSVVSAFNSDTLGCAASDQQN------G-CSSPTSCTTEMHS 171
++F+ + +QS TS+ A N + A+DQ+ G C S + T
Sbjct: 550 QSFSPPQVAENVNRKQSDTSMPLAPNFKSQDSCAADQEGVVMIGVGTCKSLKTRQTGFKP 609
Query: 172 VNLLPIEKENEYVTSISFPKEEKI 195
+E + V +I+ +EK+
Sbjct: 610 YKRCSMEVKESQVGNINNQSDEKV 633
>TAIR|locus:2044345 [details] [associations]
symbol:CCA1 "circadian clock associated 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0009723
"response to ethylene stimulus" evidence=IEP;RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP;RCA] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP;RCA] [GO:0009753
"response to jasmonic acid stimulus" evidence=IEP;RCA] [GO:0046686
"response to cadmium ion" evidence=IEP] [GO:0010243 "response to
organic nitrogen" evidence=IEP] [GO:0048574 "long-day
photoperiodism, flowering" evidence=IGI;RCA] [GO:0007623 "circadian
rhythm" evidence=IEP;IGI;RCA;IMP;TAS] [GO:0019904 "protein domain
specific binding" evidence=ISS] [GO:0043496 "regulation of protein
homodimerization activity" evidence=IMP] [GO:0009409 "response to
cold" evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0042754 "negative regulation of circadian rhythm"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009639 "response to red or far
red light" evidence=RCA] [GO:0010264 "myo-inositol hexakisphosphate
biosynthetic process" evidence=RCA] [GO:0042752 "regulation of
circadian rhythm" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 GO:GO:0009737
GO:GO:0005634 GO:GO:0046686 GO:GO:0045892 GO:GO:0045893
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733 GO:GO:0009753
GO:GO:0009723 GO:GO:0007623 GO:GO:0009651 GO:GO:0009409
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
GO:GO:0009751 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739
GO:GO:0010243 GO:GO:0043496 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC005310 GO:GO:0048574
EMBL:U28422 EMBL:U79156 EMBL:AY519511 EMBL:BT001096 EMBL:BT001105
IPI:IPI00522826 IPI:IPI00545715 PIR:T02684 RefSeq:NP_850460.1
RefSeq:NP_850461.1 UniGene:At.10956 ProteinModelPortal:P92973
SMR:P92973 IntAct:P92973 STRING:P92973 PRIDE:P92973
EnsemblPlants:AT2G46830.1 GeneID:819296 KEGG:ath:AT2G46830
GeneFarm:1652 TAIR:At2g46830 eggNOG:NOG310744 HOGENOM:HOG000084594
InParanoid:P92973 KO:K12134 OMA:HPEMANE PhylomeDB:P92973
ProtClustDB:CLSN2918288 GO:GO:0042754 Uniprot:P92973
Length = 608
Score = 254 (94.5 bits), Expect = 7.1e-21, P = 7.1e-21
Identities = 48/68 (70%), Positives = 58/68 (85%)
Query: 11 DSLPKVRKPYTITKQREKWTEEEHQRFLDALKMYGRGWRQIE---GTKTAVQIRSHAQKF 67
D + K RKPYTITKQRE+WTEEEH RF++AL++YGR W++IE TKTAVQIRSHAQKF
Sbjct: 9 DLVIKTRKPYTITKQRERWTEEEHNRFIEALRLYGRAWQKIEEHVATKTAVQIRSHAQKF 68
Query: 68 FSKVVRES 75
FSKV +E+
Sbjct: 69 FSKVEKEA 76
>TAIR|locus:2151251 [details] [associations]
symbol:LCL1 "LHY/CCA1-like 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0009723
"response to ethylene stimulus" evidence=IEP;RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP;RCA] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP;RCA] [GO:0009753
"response to jasmonic acid stimulus" evidence=IEP;RCA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0007623 "circadian
rhythm" evidence=IMP] [GO:0048573 "photoperiodism, flowering"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0009737 GO:GO:0005634 EMBL:CP002688
GO:GO:0046686 GO:GO:0009733 GO:GO:0009753 GO:GO:0009723
GO:GO:0003677 GO:GO:0007623 GO:GO:0009651 GO:GO:0003700
GO:GO:0003682 GO:GO:0009751 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009739 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 HOGENOM:HOG000237512
EMBL:AY519514 EMBL:AJ937209 IPI:IPI00528959 RefSeq:NP_568108.1
RefSeq:NP_850756.1 UniGene:At.20108 ProteinModelPortal:Q6R0G4
SMR:Q6R0G4 STRING:Q6R0G4 EnsemblPlants:AT5G02840.1
EnsemblPlants:AT5G02840.2 GeneID:831766 KEGG:ath:AT5G02840
TAIR:At5g02840 eggNOG:NOG319149 InParanoid:Q6R0G4 OMA:AYTITKS
PhylomeDB:Q6R0G4 ProtClustDB:CLSN2689417 Genevestigator:Q6R0G4
Uniprot:Q6R0G4
Length = 293
Score = 207 (77.9 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 40/67 (59%), Positives = 52/67 (77%)
Query: 15 KVRKPYTITKQREKWTEEEHQRFLDALKMYGRGWRQIE---GTKTAVQIRSHAQKFFSKV 71
KVRK YTITK RE WTE EH +FL+AL+++ R W++IE G+KT +QIRSHAQK+F KV
Sbjct: 37 KVRKAYTITKSRESWTEGEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKV 96
Query: 72 VRESNGS 78
+ NG+
Sbjct: 97 --QKNGT 101
Score = 49 (22.3 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 18/79 (22%), Positives = 34/79 (43%)
Query: 186 SISFPKEEKISTLPAHLSASSNVEELASVSKDSVYPKGDAAAAPSCTSIKLFGRTVLVSD 245
S+SFP + I+ LP + + L +++ V P D + + G ++S+
Sbjct: 133 SMSFPTQ--INNLPGYTPWDDDTSALLNIAVSGVIPPEDELDTLCGAEVDV-GSNDMISE 189
Query: 246 SWKPYSLGADSYKSPISKS 264
+ P + G S +S S
Sbjct: 190 T-SPSASGIGSSSRTLSDS 207
>TAIR|locus:2025411 [details] [associations]
symbol:ASG4 "ALTERED SEED GERMINATION 4" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0009651 "response to salt stress" evidence=IEP]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 EMBL:Y12776
EMBL:AC061957 GO:GO:0003677 GO:GO:0009651 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 EMBL:AY519508 EMBL:AJ937211 EMBL:BT029347
IPI:IPI00536561 RefSeq:NP_171659.1 UniGene:At.49839
ProteinModelPortal:Q6R0H0 SMR:Q6R0H0 IntAct:Q6R0H0
EnsemblPlants:AT1G01520.1 GeneID:839337 KEGG:ath:AT1G01520
TAIR:At1g01520 eggNOG:KOG0724 HOGENOM:HOG000237512
InParanoid:Q6R0H0 OMA:SHIMEQG PhylomeDB:Q6R0H0
ProtClustDB:CLSN2682863 Genevestigator:Q6R0H0 Uniprot:Q6R0H0
Length = 287
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 46/82 (56%), Positives = 59/82 (71%)
Query: 2 SNSLYSFENDSLPKVRKPYTITKQREKWTEEEHQRFLDALKMYGRGWRQIE---GTKTAV 58
SN SF D KVRKPYTITK RE WTE+EH +FL+AL ++ R W++I+ G+KT +
Sbjct: 37 SNRTMSFFEDPTKKVRKPYTITKSRENWTEQEHDKFLEALHLFDRDWKKIKAFVGSKTVI 96
Query: 59 QIRSHAQKFFSKVVRESNGSSE 80
QIRSHAQK+F KV + NG+ E
Sbjct: 97 QIRSHAQKYFLKV--QKNGTKE 116
>TAIR|locus:2149589 [details] [associations]
symbol:AT5G52660 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0009723
"response to ethylene stimulus" evidence=IEP] [GO:0009737 "response
to abscisic acid stimulus" evidence=IEP] [GO:0009739 "response to
gibberellin stimulus" evidence=IEP] [GO:0009751 "response to
salicylic acid stimulus" evidence=IEP] [GO:0009753 "response to
jasmonic acid stimulus" evidence=IEP] [GO:0046686 "response to
cadmium ion" evidence=IEP] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 GO:GO:0009737 EMBL:CP002688
GO:GO:0046686 GO:GO:0009753 GO:GO:0009723 GO:GO:0003677
GO:GO:0009651 GO:GO:0003700 GO:GO:0003682 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
HOGENOM:HOG000237512 eggNOG:NOG279643 EMBL:BT002002 EMBL:AY550303
EMBL:BT025882 IPI:IPI00536078 RefSeq:NP_568776.2 UniGene:At.29606
UniGene:At.67328 ProteinModelPortal:Q8H0W3 SMR:Q8H0W3
EnsemblPlants:AT5G52660.2 GeneID:835343 KEGG:ath:AT5G52660
TAIR:At5g52660 InParanoid:Q8H0W3 OMA:STSEPND PhylomeDB:Q8H0W3
ProtClustDB:CLSN2680521 ArrayExpress:Q8H0W3 Genevestigator:Q8H0W3
Uniprot:Q8H0W3
Length = 331
Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 42/74 (56%), Positives = 54/74 (72%)
Query: 7 SFENDSLPKVRKPYTITKQREKWTEEEHQRFLDALKMYGRGWRQIE---GTKTAVQIRSH 63
S E D K+RKPYTITK RE WTE EH +FL+AL+++ R W++IE G+KT +QIRSH
Sbjct: 53 SSEEDLSKKIRKPYTITKSRESWTEPEHDKFLEALQLFDRDWKKIEAFIGSKTVIQIRSH 112
Query: 64 AQKFFSKVVRESNG 77
AQK+F KV + G
Sbjct: 113 AQKYFLKVQKSGTG 126
>TAIR|locus:2124928 [details] [associations]
symbol:AT4G01280 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0009723
"response to ethylene stimulus" evidence=IEP;RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP;RCA] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP;RCA] [GO:0009753
"response to jasmonic acid stimulus" evidence=IEP;RCA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0000303 "response
to superoxide" evidence=RCA] [GO:0009736 "cytokinin mediated
signaling pathway" evidence=RCA] [GO:0009873 "ethylene mediated
signaling pathway" evidence=RCA] [GO:0048573 "photoperiodism,
flowering" evidence=RCA] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 GO:GO:0009737 GO:GO:0046686
EMBL:CP002687 GO:GO:0009733 GO:GO:0009753 GO:GO:0009723
GO:GO:0003677 GO:GO:0009651 GO:GO:0003700 GO:GO:0003682
GO:GO:0009751 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 HOGENOM:HOG000237512 ProtClustDB:CLSN2682863
EMBL:AB493668 IPI:IPI00656826 RefSeq:NP_001031568.1
UniGene:At.44234 ProteinModelPortal:C0SVG5 SMR:C0SVG5
EnsemblPlants:AT4G01280.2 GeneID:827903 KEGG:ath:AT4G01280
TAIR:At4g01280 eggNOG:NOG272389 OMA:KSGANEH PhylomeDB:C0SVG5
Genevestigator:C0SVG5 Uniprot:C0SVG5
Length = 303
Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 43/80 (53%), Positives = 58/80 (72%)
Query: 4 SLYSFENDSLPKVRKPYTITKQREKWTEEEHQRFLDALKMYGRGWRQIE---GTKTAVQI 60
S SF D K+RKPYTI K RE WT++EH +FL+AL ++ R W++IE G+KT VQI
Sbjct: 37 STVSFSEDPTTKIRKPYTIKKSRENWTDQEHDKFLEALHLFDRDWKKIEAFVGSKTVVQI 96
Query: 61 RSHAQKFFSKVVRESNGSSE 80
RSHAQK+F KV + +G++E
Sbjct: 97 RSHAQKYFLKV--QKSGANE 114
>TAIR|locus:2075049 [details] [associations]
symbol:RVE8 "REVEILLE 8" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0009723
"response to ethylene stimulus" evidence=IEP;RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP;RCA] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP;RCA] [GO:0009753
"response to jasmonic acid stimulus" evidence=IEP;RCA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0032922 "circadian
regulation of gene expression" evidence=IMP] [GO:0043966 "histone
H3 acetylation" evidence=IMP] [GO:0048573 "photoperiodism,
flowering" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0048574 "long-day photoperiodism, flowering"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0009737 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0009753 GO:GO:0009723
GO:GO:0003677 GO:GO:0009651 GO:GO:0003700 GO:GO:0003682
GO:GO:0009751 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739
GO:GO:0032922 GO:GO:0048573 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 HOGENOM:HOG000237512
GO:GO:0043966 ProtClustDB:CLSN2689417 EMBL:AY091106 EMBL:AY122969
IPI:IPI00517009 RefSeq:NP_187571.2 UniGene:At.40072
ProteinModelPortal:Q8RWU3 SMR:Q8RWU3 STRING:Q8RWU3 PRIDE:Q8RWU3
EnsemblPlants:AT3G09600.1 GeneID:820117 KEGG:ath:AT3G09600
TAIR:At3g09600 InParanoid:Q8RWU3 OMA:RVISPQH PhylomeDB:Q8RWU3
Genevestigator:Q8RWU3 Uniprot:Q8RWU3
Length = 298
Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 43/70 (61%), Positives = 55/70 (78%)
Query: 12 SLPKVRKPYTITKQREKWTEEEHQRFLDALKMYGRGWRQIE---GTKTAVQIRSHAQKFF 68
S KVRKPYTITK RE WTEEEH +FL+AL+++ R W++IE G+KT +QIRSHAQK+F
Sbjct: 29 SSKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYF 88
Query: 69 SKVVRESNGS 78
KV + NG+
Sbjct: 89 LKV--QKNGT 96
>DICTYBASE|DDB_G0288783 [details] [associations]
symbol:mybG "myb domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 dictyBase:DDB_G0288783 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GenomeReviews:CM000154_GR
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
EMBL:AAFI02000125 RefSeq:XP_636518.1 HSSP:Q5VVJ2
ProteinModelPortal:Q54IF9 PRIDE:Q54IF9 EnsemblProtists:DDB0220514
GeneID:8626803 KEGG:ddi:DDB_G0288783 eggNOG:NOG279643 OMA:NNTGERI
Uniprot:Q54IF9
Length = 423
Score = 220 (82.5 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 40/66 (60%), Positives = 53/66 (80%)
Query: 15 KVRKPYTITKQREKWTEEEHQRFLDALKMYGRGWRQIE---GTKTAVQIRSHAQKFFSKV 71
K RKPYTI+KQRE WT+EEHQ+FL+AL ++ R W++IE G+KT +QIRSHAQK+F KV
Sbjct: 30 KSRKPYTISKQRENWTDEEHQKFLEALTLFDRDWKKIESFVGSKTVIQIRSHAQKYFIKV 89
Query: 72 VRESNG 77
+ + G
Sbjct: 90 QKNNTG 95
>TAIR|locus:2042872 [details] [associations]
symbol:AT2G38090 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002685 GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:BT006122 EMBL:AY519529
EMBL:AK118135 IPI:IPI00542058 RefSeq:NP_181344.2 UniGene:At.46819
ProteinModelPortal:Q8GXN7 SMR:Q8GXN7 EnsemblPlants:AT2G38090.1
GeneID:818387 KEGG:ath:AT2G38090 TAIR:At2g38090
HOGENOM:HOG000237920 InParanoid:Q8GXN7 OMA:HRQFLMG PhylomeDB:Q8GXN7
ProtClustDB:CLSN2918198 Genevestigator:Q8GXN7 Uniprot:Q8GXN7
Length = 298
Score = 134 (52.2 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 31/68 (45%), Positives = 42/68 (61%)
Query: 21 TITKQREK---WTEEEHQRFLDALKMYGRG-WRQIEG----TKTAVQIRSHAQKFFSKVV 72
T +R+K WTEEEH++FL LK YG+G WR I T+T Q+ SHAQK+F +
Sbjct: 132 TAEHERKKGVPWTEEEHRQFLMGLKKYGKGDWRNIARNFVTTRTPTQVASHAQKYF---I 188
Query: 73 RESNGSSE 80
R+ NG +
Sbjct: 189 RQVNGGKD 196
>TAIR|locus:2150149 [details] [associations]
symbol:AT5G01200 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AL137189
HOGENOM:HOG000237920 EMBL:AY519530 IPI:IPI00517812 PIR:T45960
RefSeq:NP_195740.1 UniGene:At.27639 ProteinModelPortal:Q9LFB6
SMR:Q9LFB6 EnsemblPlants:AT5G01200.1 GeneID:831676
KEGG:ath:AT5G01200 TAIR:At5g01200 eggNOG:NOG260690
InParanoid:Q9LFB6 OMA:SAANSDY PhylomeDB:Q9LFB6
ProtClustDB:CLSN2916637 ArrayExpress:Q9LFB6 Genevestigator:Q9LFB6
Uniprot:Q9LFB6
Length = 267
Score = 132 (51.5 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 30/67 (44%), Positives = 40/67 (59%)
Query: 24 KQREK---WTEEEHQRFLDALKMYGRG-WRQIEG----TKTAVQIRSHAQKFFSKVVRES 75
K+R+K WTE+EH RFL LK YG+G WR I T+T Q+ SHAQK+F + + +
Sbjct: 140 KERKKGVPWTEDEHLRFLMGLKKYGKGDWRNIAKSFVTTRTPTQVASHAQKYFLRQLTDG 199
Query: 76 NGSSESS 82
SS
Sbjct: 200 KDKRRSS 206
>TAIR|locus:2154508 [details] [associations]
symbol:AT5G58900 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB016885
HOGENOM:HOG000237920 EMBL:BT005473 EMBL:AY519533 EMBL:AK118891
IPI:IPI00547099 RefSeq:NP_200698.1 UniGene:At.7757
ProteinModelPortal:Q9FIL9 SMR:Q9FIL9 DNASU:836007
EnsemblPlants:AT5G58900.1 GeneID:836007 KEGG:ath:AT5G58900
TAIR:At5g58900 eggNOG:NOG325121 InParanoid:Q9FIL9 OMA:PFTLDWA
PhylomeDB:Q9FIL9 ProtClustDB:CLSN2914846 ArrayExpress:Q9FIL9
Genevestigator:Q9FIL9 Uniprot:Q9FIL9
Length = 288
Score = 131 (51.2 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 30/69 (43%), Positives = 40/69 (57%)
Query: 17 RKPYTITKQREKWTEEEHQRFLDALKMYGRG-WRQIEG----TKTAVQIRSHAQKFFSKV 71
R P K+ WTEEEH+ FL LK YG+G WR I T+T Q+ SHAQK+F
Sbjct: 131 RSPELERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYF--- 187
Query: 72 VRESNGSSE 80
+R+ +G +
Sbjct: 188 IRQLSGGKD 196
>TAIR|locus:2171519 [details] [associations]
symbol:AT5G47390 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009651 "response to salt stress"
evidence=IEP] [GO:0009723 "response to ethylene stimulus"
evidence=IEP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP] [GO:0009739 "response to gibberellin stimulus"
evidence=IEP] [GO:0009751 "response to salicylic acid stimulus"
evidence=IEP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IEP] [GO:0046686 "response to cadmium ion" evidence=IEP]
InterPro:IPR001005 InterPro:IPR001878 InterPro:IPR009057
Pfam:PF00249 PROSITE:PS50158 SMART:SM00343 SMART:SM00717
GO:GO:0009737 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046686
GO:GO:0009753 GO:GO:0009723 GO:GO:0003677 GO:GO:0009651
GO:GO:0008270 GO:GO:0003700 GO:GO:0003682 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB018117
HOGENOM:HOG000237594 EMBL:AY072077 EMBL:AY096661 EMBL:AY084295
EMBL:AY519516 EMBL:AK226931 IPI:IPI00516324 RefSeq:NP_199550.1
UniGene:At.23392 ProteinModelPortal:Q9LVS0 SMR:Q9LVS0 STRING:Q9LVS0
PaxDb:Q9LVS0 PRIDE:Q9LVS0 EnsemblPlants:AT5G47390.1 GeneID:834786
KEGG:ath:AT5G47390 TAIR:At5g47390 eggNOG:NOG267183
InParanoid:Q9LVS0 OMA:SSRQSAF PhylomeDB:Q9LVS0
ProtClustDB:CLSN2686371 ArrayExpress:Q9LVS0 Genevestigator:Q9LVS0
Uniprot:Q9LVS0
Length = 365
Score = 118 (46.6 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 29/64 (45%), Positives = 41/64 (64%)
Query: 23 TKQREK---WTEEEHQRFLDALKMYGRG-WRQIEG----TKTAVQIRSHAQKFFSKVVRE 74
+++R+K WTEEEH+ FL L+ G+G WR I T+T Q+ SHAQK+F +R+
Sbjct: 89 SRERKKGTPWTEEEHRMFLLGLQKLGKGDWRGISRNYVTTRTPTQVASHAQKYF---IRQ 145
Query: 75 SNGS 78
SN S
Sbjct: 146 SNVS 149
Score = 51 (23.0 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 22/77 (28%), Positives = 34/77 (44%)
Query: 190 PKEEKISTL--PA--HLSASSNVEELASVSKDSVYPKGDAAAAPSCTSIKLFGRTVLVSD 245
PK+E+ + P H A NV+EL +SK S+ + S+KL G +
Sbjct: 286 PKKEETHEILRPTAVHSKAPINVDELLGMSKLSLAESNKHGESDQSLSLKLGGGSSSRQS 345
Query: 246 SWKPY-SLGADSYKSPI 261
++ P S + KS I
Sbjct: 346 AFHPNPSSDSSDIKSVI 362
>UNIPROTKB|Q8S9H7 [details] [associations]
symbol:DIVARICATA "Transcription factor DIVARICATA"
species:4151 "Antirrhinum majus" [GO:0009908 "flower development"
evidence=IMP] [GO:0048262 "determination of dorsal/ventral
asymmetry" evidence=IMP] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0009908
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 GO:GO:0048262 EMBL:AY077453
ProteinModelPortal:Q8S9H7 Uniprot:Q8S9H7
Length = 307
Score = 127 (49.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 38/127 (29%), Positives = 56/127 (44%)
Query: 24 KQREKWTEEEHQRFLDALKMYGRG-WRQIEG----TKTAVQIRSHAQKFFSKVVRESNGS 78
K+ WTEEEH+ FL LK YG+G WR I T+T Q+ SHAQK+F + + S G
Sbjct: 129 KKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQL--SGGK 186
Query: 79 SESSXXXXXXXXXXXXXXXXXXXXXXSVDSLKATSVSNQQENFTSSNALVSDKDRQSPTS 138
+ S S++ QQ + TS + L D+ S +
Sbjct: 187 DKRRASIHDITTVNLSDNQTPSPDNKKPPSSPDHSMAQQQTSSTSIHKLPFQWDQTSNET 246
Query: 139 VVSAFNS 145
++ +S
Sbjct: 247 IMGFASS 253
>TAIR|locus:2166459 [details] [associations]
symbol:AT5G05790 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB005237
HOGENOM:HOG000237920 ProtClustDB:CLSN2684400 EMBL:AY519531
EMBL:BT026054 IPI:IPI00544524 RefSeq:NP_196198.1 UniGene:At.32952
ProteinModelPortal:Q9FFJ9 SMR:Q9FFJ9 EnsemblPlants:AT5G05790.1
GeneID:830464 KEGG:ath:AT5G05790 TAIR:At5g05790 eggNOG:NOG242423
InParanoid:Q9FFJ9 OMA:ISRNFVG PhylomeDB:Q9FFJ9 ArrayExpress:Q9FFJ9
Genevestigator:Q9FFJ9 Uniprot:Q9FFJ9
Length = 277
Score = 126 (49.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 25/47 (53%), Positives = 32/47 (68%)
Query: 29 WTEEEHQRFLDALKMYGRG-WRQIE----GTKTAVQIRSHAQKFFSK 70
WTEEEH+RFL L YG+G WR I G+KT Q+ SHAQK++ +
Sbjct: 133 WTEEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQKYYQR 179
>DICTYBASE|DDB_G0274463 [details] [associations]
symbol:mybJ "myb domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
dictyBase:DDB_G0274463 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GenomeReviews:CM000151_GR GO:GO:0006351 GO:GO:0003682
EMBL:AAFI02000012 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 RefSeq:XP_644160.1 ProteinModelPortal:Q869R9
EnsemblProtists:DDB0220506 GeneID:8619589 KEGG:ddi:DDB_G0274463
eggNOG:NOG264937 OMA:KGAWKEI Uniprot:Q869R9
Length = 734
Score = 131 (51.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 24/57 (42%), Positives = 42/57 (73%)
Query: 23 TKQREKWTEEEHQRFLDALKMYGRG-WRQIE---GTKTAVQIRSHAQKFFSKVVRES 75
T ++ WT+EEH RFL+ ++++G+G W++I GT+T QI+SHAQK++ + +E+
Sbjct: 373 TSLKQGWTKEEHIRFLNGIQIHGKGAWKEIAQFVGTRTPTQIQSHAQKYYLRQKQET 429
>TAIR|locus:2175478 [details] [associations]
symbol:AT5G04760 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010286 "heat acclimation" evidence=RCA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AL162972
EMBL:AB008271 UniGene:At.20111 UniGene:At.68528
HOGENOM:HOG000237920 EMBL:AY050976 EMBL:AY091177 EMBL:AY088362
EMBL:AB493736 IPI:IPI00530948 PIR:T48472 RefSeq:NP_196096.1
ProteinModelPortal:Q9LZ21 SMR:Q9LZ21 IntAct:Q9LZ21
EnsemblPlants:AT5G04760.1 GeneID:830354 KEGG:ath:AT5G04760
TAIR:At5g04760 eggNOG:NOG276102 InParanoid:Q9LZ21 OMA:WRNISRW
PhylomeDB:Q9LZ21 ProtClustDB:CLSN2686445 ArrayExpress:Q9LZ21
Genevestigator:Q9LZ21 Uniprot:Q9LZ21
Length = 215
Score = 120 (47.3 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 29/64 (45%), Positives = 37/64 (57%)
Query: 24 KQREKWTEEEHQRFLDALKMYGRG-WRQIEG----TKTAVQIRSHAQKFF---SKVVRES 75
K+ WTE EH+ FL LK YG+G WR I T+T Q+ SHAQK+F + V +E
Sbjct: 96 KRGTPWTENEHKLFLIGLKRYGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQNSVKKER 155
Query: 76 NGSS 79
SS
Sbjct: 156 KRSS 159
>DICTYBASE|DDB_G0289151 [details] [associations]
symbol:mybI "myb domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
dictyBase:DDB_G0289151 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0003682 GenomeReviews:CM000154_GR
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
PROSITE:PS51294 EMBL:AAFI02000130 RefSeq:XP_636387.1
ProteinModelPortal:Q54HX6 EnsemblProtists:DDB0233332 GeneID:8626988
KEGG:ddi:DDB_G0289151 eggNOG:NOG265212 OMA:CKLIKEN Uniprot:Q54HX6
Length = 977
Score = 129 (50.5 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 43/171 (25%), Positives = 72/171 (42%)
Query: 24 KQREKWTEEEHQRFLDALKMYG----RGWRQIEGTKTAVQIRSHAQKFFSKVVRESNGSS 79
KQ WT EEH RF++AL YG + Q T+ Q+R+HAQK+F ++ RE
Sbjct: 170 KQSRYWTPEEHSRFIEALSKYGHKDVKSISQYVSTRNPTQVRTHAQKYFLRIDRERGRKL 229
Query: 80 ESSXXXXXXXXXXXXXXXXXXXXXXSVDSLKATSVS---NQQENFTSSNALVSDKDRQSP 136
ES S + S S N N S++ ++S + +
Sbjct: 230 ESKESINGGADKDDDWLREEYNDEGSPTQYSSCSNSPTTNSVANPFSNSLIISSNNNNNS 289
Query: 137 TSVVSAFNSDTLGCAASDQQN-GCSSPTSCTTEMHSVNLLP-IEKENEYVT 185
S + N++ ++ N + + + ++S N P I+++ E VT
Sbjct: 290 NSSNNNNNNNNNNNNNNNNNNININGSSGSNSNVNSGNSSPLIKRKREAVT 340
>TAIR|locus:2074723 [details] [associations]
symbol:AT3G11280 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009751 "response to salicylic acid stimulus" evidence=IEP]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:0019344 "cysteine biosynthetic process" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002686 GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 GO:GO:0009751 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009739 InterPro:IPR017884 PROSITE:PS51293 EMBL:AC073395
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 UniGene:At.23548 EMBL:AY056180 EMBL:AY091265
EMBL:AY550308 IPI:IPI00541857 RefSeq:NP_187737.1 RefSeq:NP_850558.1
ProteinModelPortal:Q9C773 SMR:Q9C773 STRING:Q9C773 PRIDE:Q9C773
DNASU:820299 EnsemblPlants:AT3G11280.1 EnsemblPlants:AT3G11280.2
GeneID:820299 KEGG:ath:AT3G11280 TAIR:At3g11280 InParanoid:Q9C773
OMA:FEAAINF PhylomeDB:Q9C773 ProtClustDB:CLSN2684400
ArrayExpress:Q9C773 Genevestigator:Q9C773 Uniprot:Q9C773
Length = 263
Score = 119 (46.9 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 25/52 (48%), Positives = 33/52 (63%)
Query: 24 KQREKWTEEEHQRFLDALKMYGRG-WRQIEG----TKTAVQIRSHAQKFFSK 70
K+ WTEEEH+RFL L YG+G WR I +KT Q+ SHAQK++ +
Sbjct: 124 KKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVVSKTPTQVASHAQKYYQR 175
>DICTYBASE|DDB_G0271670 [details] [associations]
symbol:DDB_G0271670 species:44689 "Dictyostelium
discoideum" [GO:0005576 "extracellular region" evidence=IEA]
dictyBase:DDB_G0271670 GO:GO:0005576 EMBL:AAFI02000006
ProtClustDB:CLSZ2431310 RefSeq:XP_645495.1
ProteinModelPortal:Q75JC9 EnsemblProtists:DDB0168484 GeneID:8618123
KEGG:ddi:DDB_G0271670 OMA:EITNEEP Uniprot:Q75JC9
Length = 374
Score = 121 (47.7 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 57/271 (21%), Positives = 101/271 (37%)
Query: 13 LPKVRKPYTITKQREKWTEEEHQRFLDALKMYGRGWRQIEGTKTAVQIRSHAQKFFSKVV 72
LP + PY ++ + T EE QR +Y Q+E T ++ F ++
Sbjct: 17 LPSIVTPY---RKSVEITNEEPQR-----DIY-----QLEKTNKMAEVGDLGVASFLNIL 63
Query: 73 RESNGSSESSXXXXXXXXXXXXXXXXXXXXXXSVDSLKATSVSNQQENFTSSNALVSDKD 132
S+ SS SS S S ++S S+ + +SS++ S
Sbjct: 64 DTSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 123
Query: 133 RQSPTSVVSAFNSDTLGCAASDQQNGCSSPTSCTTEMHSVNLLPIEKENEYVTSISFPKE 192
S +S S+ +S + ++S + SS +S ++ S + + +S S
Sbjct: 124 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 183
Query: 193 EKISTLPAHLSASSNVEELASVSKDSVYPKGDAAAAPSCTSIKLFGRTVLVSDSWKPYSL 252
S+ + S+SS+ +S S S ++++ S +S + S S S
Sbjct: 184 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 243
Query: 253 GADSYKSPISKSSQENLDVDKKILSSQPHQS 283
+ S S S SS + SS S
Sbjct: 244 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 274
>TAIR|locus:2027181 [details] [associations]
symbol:AT1G74840 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0009723
"response to ethylene stimulus" evidence=IEP] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0009737 "response to abscisic
acid stimulus" evidence=IEP] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0009751 "response to salicylic acid
stimulus" evidence=IEP] [GO:0009753 "response to jasmonic acid
stimulus" evidence=IEP] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009963 "positive regulation of flavonoid
biosynthetic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0046686
GO:GO:0009733 GO:GO:0009753 GO:GO:0009723 GO:GO:0003677
GO:GO:0009651 GO:GO:0003700 GO:GO:0003682 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC008263
EMBL:AC013258 HOGENOM:HOG000237594 ProtClustDB:CLSN2682289
EMBL:AY070098 EMBL:AY096393 EMBL:AY519510 IPI:IPI00526439
PIR:H96777 RefSeq:NP_177622.1 UniGene:At.11594
ProteinModelPortal:Q9S7N6 SMR:Q9S7N6 IntAct:Q9S7N6 STRING:Q9S7N6
EnsemblPlants:AT1G74840.1 GeneID:843823 KEGG:ath:AT1G74840
TAIR:At1g74840 InParanoid:Q9S7N6 OMA:GTRREIM PhylomeDB:Q9S7N6
ArrayExpress:Q9S7N6 Genevestigator:Q9S7N6 Uniprot:Q9S7N6
Length = 265
Score = 117 (46.2 bits), Expect = 0.00011, P = 0.00011
Identities = 30/77 (38%), Positives = 45/77 (58%)
Query: 6 YSFENDSLPKVRKPYTITKQRE-KWTEEEHQRFLDALKMYGRG-WRQIEG----TKTAVQ 59
Y+ +++LP I ++R WTEEEH+ FL L+ G+G W+ I T+T+ Q
Sbjct: 74 YASADEALPMSSSNGKIERKRGVPWTEEEHKLFLLGLQRVGKGDWKGISRNFVKTRTSTQ 133
Query: 60 IRSHAQKFFSKVVRESN 76
+ SHAQK+F +R SN
Sbjct: 134 VASHAQKYF---LRRSN 147
>TAIR|locus:2133667 [details] [associations]
symbol:AT4G09450 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AL161514
HOGENOM:HOG000237920 EMBL:AY122911 IPI:IPI00520050 PIR:C85096
RefSeq:NP_192683.1 UniGene:At.33693 ProteinModelPortal:Q9M0P7
SMR:Q9M0P7 DNASU:826528 EnsemblPlants:AT4G09450.1 GeneID:826528
KEGG:ath:AT4G09450 TAIR:At4g09450 eggNOG:NOG301281
InParanoid:Q9M0P7 OMA:EGLNKFG PhylomeDB:Q9M0P7
ProtClustDB:CLSN2684024 Genevestigator:Q9M0P7 Uniprot:Q9M0P7
Length = 200
Score = 113 (44.8 bits), Expect = 0.00014, P = 0.00014
Identities = 22/59 (37%), Positives = 37/59 (62%)
Query: 29 WTEEEHQRFLDALKMYGRG-WRQIEG----TKTAVQIRSHAQKFFSKVVRESNGSSESS 82
W+EEE + FL+ L +G+G W+ I ++T+ Q+ SHAQK+F++ +ES + S
Sbjct: 93 WSEEEQRLFLEGLNKFGKGDWKNISRYCVKSRTSTQVASHAQKYFARQKQESTNTKRPS 151
>TAIR|locus:2075775 [details] [associations]
symbol:AT3G10580 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 EMBL:AC011560 EMBL:AC013428 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 HOGENOM:HOG000237920
ProtClustDB:CLSN2684024 IPI:IPI00530835 RefSeq:NP_187669.1
UniGene:At.53250 ProteinModelPortal:Q9SQY8 SMR:Q9SQY8
EnsemblPlants:AT3G10580.1 GeneID:820225 KEGG:ath:AT3G10580
TAIR:At3g10580 InParanoid:Q9SQY8 OMA:NIAQFLQ PhylomeDB:Q9SQY8
Genevestigator:Q9SQY8 Uniprot:Q9SQY8
Length = 287
Score = 116 (45.9 bits), Expect = 0.00018, P = 0.00018
Identities = 30/78 (38%), Positives = 46/78 (58%)
Query: 9 END--SLPKVRKPYTITKQREK---WTEEEHQRFLDALKMYGRG-WRQIEG----TKTAV 58
E+D SLP+ K T ++K W+ EEH+ FLD L YG+G W+ I +++ +
Sbjct: 72 EDDYVSLPEATKSKTQGTGKKKGIPWSPEEHRLFLDGLNKYGKGDWKSISRECVTSRSPM 131
Query: 59 QIRSHAQKFFSKVVRESN 76
Q+ SHAQK+F +R+ N
Sbjct: 132 QVASHAQKYF---LRQKN 146
>TAIR|locus:2171711 [details] [associations]
symbol:AT5G23650 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB025633
HOGENOM:HOG000237920 EMBL:DQ056685 IPI:IPI00534696
RefSeq:NP_197754.1 UniGene:At.54959 ProteinModelPortal:Q9LT00
SMR:Q9LT00 EnsemblPlants:AT5G23650.1 GeneID:832430
KEGG:ath:AT5G23650 TAIR:At5g23650 eggNOG:NOG311780
InParanoid:Q9LT00 OMA:HYNILAR PhylomeDB:Q9LT00
ProtClustDB:CLSN2914851 Genevestigator:Q9LT00 Uniprot:Q9LT00
Length = 337
Score = 117 (46.2 bits), Expect = 0.00019, P = 0.00019
Identities = 31/100 (31%), Positives = 45/100 (45%)
Query: 29 WTEEEHQRFLDALKMYGRG-WRQIEG----TKTAVQIRSHAQKFFSKVVRESNGSSESSX 83
W EH++FL LK YG+G WR I T+T+ Q+ SHAQK+F+ + E S
Sbjct: 122 WKPFEHRQFLHGLKKYGKGDWRSISRHCVVTRTSTQVASHAQKYFAHINSEDKKRKRPSI 181
Query: 84 XXXXXXXXXXXXXXXXXXXXXSVDSLKATSVSNQQENFTS 123
+++ AT+ SN Q N T+
Sbjct: 182 HDITIAENKSISTKQRPITWQKINNNGATA-SNTQANQTT 220
>TAIR|locus:2020653 [details] [associations]
symbol:AT1G70000 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009651 "response to salt stress"
evidence=IEP] [GO:0009723 "response to ethylene stimulus"
evidence=IEP] [GO:0009733 "response to auxin stimulus"
evidence=IEP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP] [GO:0009739 "response to gibberellin stimulus"
evidence=IEP] [GO:0009751 "response to salicylic acid stimulus"
evidence=IEP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IEP] [GO:0046686 "response to cadmium ion" evidence=IEP]
[GO:0080167 "response to karrikin" evidence=IEP] InterPro:IPR001005
InterPro:IPR001878 InterPro:IPR009057 Pfam:PF00249 PROSITE:PS50158
SMART:SM00343 SMART:SM00717 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009737 GO:GO:0046686 GO:GO:0009733 GO:GO:0009753
GO:GO:0009723 GO:GO:0003677 GO:GO:0009651 GO:GO:0008270
GO:GO:0003700 GO:GO:0003682 GO:GO:0080167 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC002062
EMBL:BT006413 EMBL:AY519509 EMBL:AK227711 IPI:IPI00529630
PIR:F96722 RefSeq:NP_001185359.1 RefSeq:NP_177158.1
UniGene:At.35354 UniGene:At.67206 ProteinModelPortal:O04544
SMR:O04544 PRIDE:O04544 EnsemblPlants:AT1G70000.1
EnsemblPlants:AT1G70000.2 GeneID:843337 KEGG:ath:AT1G70000
TAIR:At1g70000 eggNOG:NOG270059 HOGENOM:HOG000237594
InParanoid:O04544 OMA:SMNNLSQ PhylomeDB:O04544
ProtClustDB:CLSN2913574 ArrayExpress:O04544 Genevestigator:O04544
Uniprot:O04544
Length = 261
Score = 113 (44.8 bits), Expect = 0.00032, P = 0.00032
Identities = 26/64 (40%), Positives = 35/64 (54%)
Query: 24 KQREKWTEEEHQRFLDALKMYGRG-WRQIEG----TKTAVQIRSHAQKFFSKVVRESNGS 78
K+ WTEEEH+ FL L G+G WR I T+T Q+ SHAQK+F + ++
Sbjct: 95 KRGTPWTEEEHRLFLTGLHKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRTNQNRRR 154
Query: 79 SESS 82
SS
Sbjct: 155 RRSS 158
>TAIR|locus:2151621 [details] [associations]
symbol:AT5G61620 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR001005 InterPro:IPR001878
InterPro:IPR009057 Pfam:PF00249 PROSITE:PS50158 SMART:SM00343
SMART:SM00717 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB012239 IPI:IPI00529008
RefSeq:NP_200970.1 UniGene:At.55665 ProteinModelPortal:Q9FKF9
SMR:Q9FKF9 PaxDb:Q9FKF9 PRIDE:Q9FKF9 EnsemblPlants:AT5G61620.1
GeneID:836284 KEGG:ath:AT5G61620 TAIR:At5g61620 eggNOG:NOG325297
HOGENOM:HOG000152521 InParanoid:Q9FKF9 OMA:HNGHNAR PhylomeDB:Q9FKF9
ProtClustDB:CLSN2713497 Genevestigator:Q9FKF9 Uniprot:Q9FKF9
Length = 317
Score = 114 (45.2 bits), Expect = 0.00038, P = 0.00038
Identities = 24/53 (45%), Positives = 33/53 (62%)
Query: 24 KQREKWTEEEHQRFLDALKMYGRG-WRQIE----GTKTAVQIRSHAQKFFSKV 71
K+ + WTEEEH+ FL L G+G WR I T+T Q+ SHAQK+F ++
Sbjct: 105 KKGKPWTEEEHRNFLIGLNKLGKGDWRGIAKSFVSTRTPTQVASHAQKYFIRL 157
>TAIR|locus:2159607 [details] [associations]
symbol:AT5G08520 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB006697
HOGENOM:HOG000237920 EMBL:AY072090 EMBL:AY096571 EMBL:AY519532
IPI:IPI00516280 RefSeq:NP_196469.1 UniGene:At.8762
ProteinModelPortal:Q9FNN6 SMR:Q9FNN6 STRING:Q9FNN6 PaxDb:Q9FNN6
PRIDE:Q9FNN6 EnsemblPlants:AT5G08520.1 GeneID:830751
KEGG:ath:AT5G08520 TAIR:At5g08520 eggNOG:NOG259915
InParanoid:Q9FNN6 OMA:NSMNRER PhylomeDB:Q9FNN6
ProtClustDB:CLSN2687300 ArrayExpress:Q9FNN6 Genevestigator:Q9FNN6
Uniprot:Q9FNN6
Length = 298
Score = 112 (44.5 bits), Expect = 0.00056, P = 0.00056
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 29 WTEEEHQRFLDALKMYGRG-WRQIEG----TKTAVQIRSHAQKFFSKV 71
WTE+EH+ FL L YG+G WR I T+T Q+ SHAQK+F ++
Sbjct: 120 WTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRL 167
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.310 0.123 0.351 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 303 281 0.00083 115 3 11 23 0.45 34
33 0.42 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 30
No. of states in DFA: 615 (65 KB)
Total size of DFA: 208 KB (2116 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 26.50u 0.15s 26.65t Elapsed: 00:00:01
Total cpu time: 26.50u 0.15s 26.65t Elapsed: 00:00:01
Start: Sat May 11 02:50:56 2013 End: Sat May 11 02:50:57 2013