BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022044
(303 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6R0H0|ASG4_ARATH Transcription factor ASG4 OS=Arabidopsis thaliana GN=ASG4 PE=2 SV=1
Length = 287
Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 75/107 (70%), Gaps = 11/107 (10%)
Query: 2 SNSLYSFENDSLPKVRKPYTITKQREKWTEEEHQRFLDALKMYGRGWRQIE---GTKTAV 58
SN SF D KVRKPYTITK RE WTE+EH +FL+AL ++ R W++I+ G+KT +
Sbjct: 37 SNRTMSFFEDPTKKVRKPYTITKSRENWTEQEHDKFLEALHLFDRDWKKIKAFVGSKTVI 96
Query: 59 QIRSHAQKFFSKVVRESNGSSESSIMPIEIPPPRPKRKPVHPYPRKS 105
QIRSHAQK+F KV + NG+ E +PPPRPKRK HPYP+K+
Sbjct: 97 QIRSHAQKYFLKV--QKNGTKE------HLPPPRPKRKANHPYPQKA 135
>sp|Q54IF9|MYBG_DICDI Myb-like protein G OS=Dictyostelium discoideum GN=mybG PE=3 SV=1
Length = 423
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 53/93 (56%), Positives = 68/93 (73%), Gaps = 11/93 (11%)
Query: 15 KVRKPYTITKQREKWTEEEHQRFLDALKMYGRGWRQIE---GTKTAVQIRSHAQKFFSKV 71
K RKPYTI+KQRE WT+EEHQ+FL+AL ++ R W++IE G+KT +QIRSHAQK+F KV
Sbjct: 30 KSRKPYTISKQRENWTDEEHQKFLEALTLFDRDWKKIESFVGSKTVIQIRSHAQKYFIKV 89
Query: 72 VRESNGSSESSIMPIEIPPPRPKRKPVHPYPRK 104
+ + G IPPPRPKRK + PYP+K
Sbjct: 90 QKNNTGE--------RIPPPRPKRKSIQPYPQK 114
>sp|Q6R0H1|LHY_ARATH Protein LHY OS=Arabidopsis thaliana GN=LHY PE=1 SV=2
Length = 645
Score = 114 bits (286), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/97 (67%), Positives = 78/97 (80%), Gaps = 5/97 (5%)
Query: 13 LPKVRKPYTITKQREKWTEEEHQRFLDALKMYGRGWRQIE---GTKTAVQIRSHAQKFFS 69
L K RKPYTITKQRE+WTE+EH+RFL+AL++YGR W++IE GTKTAVQIRSHAQKFF+
Sbjct: 11 LAKARKPYTITKQRERWTEDEHERFLEALRLYGRAWQRIEEHIGTKTAVQIRSHAQKFFT 70
Query: 70 KVVRESN--GSSESSIMPIEIPPPRPKRKPVHPYPRK 104
K+ +E+ G + IEIPPPRPKRKP PYPRK
Sbjct: 71 KLEKEAEVKGIPVCQALDIEIPPPRPKRKPNTPYPRK 107
>sp|P92973|CCA1_ARATH Protein CCA1 OS=Arabidopsis thaliana GN=CCA1 PE=1 SV=1
Length = 608
Score = 111 bits (278), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/135 (54%), Positives = 97/135 (71%), Gaps = 11/135 (8%)
Query: 11 DSLPKVRKPYTITKQREKWTEEEHQRFLDALKMYGRGWRQIE---GTKTAVQIRSHAQKF 67
D + K RKPYTITKQRE+WTEEEH RF++AL++YGR W++IE TKTAVQIRSHAQKF
Sbjct: 9 DLVIKTRKPYTITKQRERWTEEEHNRFIEALRLYGRAWQKIEEHVATKTAVQIRSHAQKF 68
Query: 68 FSKVVRESN--GSSESSIMPIEIPPPRPKRKPVHPYPRKSVDS---LKATSVSNQQENFT 122
FSKV +E+ G + + I IPPPRPKRKP +PYPRK+ + T V++ +E+
Sbjct: 69 FSKVEKEAEAKGVAMGQALDIAIPPPRPKRKPNNPYPRKTGSGTILMSKTGVNDGKESLG 128
Query: 123 S---SNALVSDKDRQ 134
S S+ ++++DRQ
Sbjct: 129 SEKVSHPEMANEDRQ 143
>sp|Q869R9|MYBJ_DICDI Myb-like protein J OS=Dictyostelium discoideum GN=mybJ PE=3 SV=1
Length = 734
Score = 57.8 bits (138), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 42/57 (73%), Gaps = 4/57 (7%)
Query: 23 TKQREKWTEEEHQRFLDALKMYGRG-WRQIE---GTKTAVQIRSHAQKFFSKVVRES 75
T ++ WT+EEH RFL+ ++++G+G W++I GT+T QI+SHAQK++ + +E+
Sbjct: 373 TSLKQGWTKEEHIRFLNGIQIHGKGAWKEIAQFVGTRTPTQIQSHAQKYYLRQKQET 429
>sp|Q54HX6|MYBI_DICDI Myb-like protein I OS=Dictyostelium discoideum GN=mybI PE=3 SV=1
Length = 977
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 24 KQREKWTEEEHQRFLDALKMYG----RGWRQIEGTKTAVQIRSHAQKFFSKVVRESNGSS 79
KQ WT EEH RF++AL YG + Q T+ Q+R+HAQK+F ++ RE
Sbjct: 170 KQSRYWTPEEHSRFIEALSKYGHKDVKSISQYVSTRNPTQVRTHAQKYFLRIDRERGRKL 229
Query: 80 ES 81
ES
Sbjct: 230 ES 231
>sp|Q8S9H7|DIV_ANTMA Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA
PE=2 SV=1
Length = 307
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 43/85 (50%), Gaps = 13/85 (15%)
Query: 29 WTEEEHQRFLDALKMYGRG-WRQIEG----TKTAVQIRSHAQKFFSKVVRESNGSSESSI 83
WTEEEH+ FL LK YG+G WR I T+T Q+ SHAQK+F + + +SI
Sbjct: 134 WTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRRASI 193
Query: 84 MPI--------EIPPPRPKRKPVHP 100
I + P P K+ P P
Sbjct: 194 HDITTVNLSDNQTPSPDNKKPPSSP 218
>sp|Q54Z40|MYBH_DICDI Myb-like protein H OS=Dictyostelium discoideum GN=mybH PE=3 SV=1
Length = 1217
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 42/63 (66%), Gaps = 4/63 (6%)
Query: 29 WTEEEHQRFLDALKMYGRG-WRQIEG---TKTAVQIRSHAQKFFSKVVRESNGSSESSIM 84
W+ EEH+ FL A++ YGRG W+ I ++ +QI++HA+ +F K+ +++ S+ +I+
Sbjct: 232 WSNEEHELFLKAIEKYGRGNWKLISTLIKSRNTLQIKNHARIYFDKISQQNGPPSKKTII 291
Query: 85 PIE 87
+E
Sbjct: 292 EVE 294
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 26 REKWTEEEHQRFLDALKMYGRGWRQIE---GTKTAVQIRSHAQKFFSKVVRESNG 77
R WT+EE + F++A K+Y + ++I+ TKT +Q+RSHAQKF K+ E NG
Sbjct: 150 RSSWTKEEERLFVEAYKLYDKDNKKIQEHVKTKTILQVRSHAQKFALKL--EKNG 202
>sp|Q2V9B0|MY1R1_SOLTU Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1
Length = 297
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 5/45 (11%)
Query: 29 WTEEEHQRFLDALKMYGRG-WRQIE----GTKTAVQIRSHAQKFF 68
WTEEEH+ FL L+ G+G WR I T+T Q+ SHAQK+F
Sbjct: 97 WTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYF 141
>sp|Q5RGA4|MYSM1_DANRE Histone H2A deubiquitinase MYSM1 OS=Danio rerio GN=mysm1 PE=2 SV=2
Length = 822
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 12/83 (14%)
Query: 15 KVRKPYTITKQRE-KWTEEEHQRFLDALKMYGRGWRQIE---GTKTAVQIRSHAQKFF-- 68
KV+KP + + +W EEE + F L +GR W +I GT+T +Q++S+A+++F
Sbjct: 87 KVKKPLVKSSAAQTRWAEEEKELFEKGLAQFGRRWTKIAKLIGTRTVLQVKSYAKQYFKN 146
Query: 69 ------SKVVRESNGSSESSIMP 85
+ V +N +S SSI P
Sbjct: 147 KPKAEPAAEVTSANVTSVSSIQP 169
>sp|A0JMR6|MYSM1_XENLA Histone H2A deubiquitinase MYSM1 OS=Xenopus laevis GN=mysm1 PE=2
SV=1
Length = 818
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 9 ENDSLPKVRKPYTITKQREKWTEEEHQRFLDALKMYGRGWRQIE---GTKTAVQIRSHAQ 65
E + +VR P + KWT+EE F L +GR W I G+++ +Q++++A+
Sbjct: 92 EKQCIKRVRSPAKASSSPVKWTKEEKNLFEQGLATFGRRWTSIARLIGSRSVLQVKNYAR 151
Query: 66 KFF-SKVVRESNGSSESSIMPIEIP 89
+F +K E E+ I ++IP
Sbjct: 152 HYFKNKCKLEGFVKEEAKIGSLQIP 176
>sp|Q5F3F2|MYSM1_CHICK Histone H2A deubiquitinase MYSM1 OS=Gallus gallus GN=MYSM1 PE=2
SV=1
Length = 832
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 16 VRKPYTITKQREKWTEEEHQRFLDALKMYGRGWRQIE---GTKTAVQIRSHAQKFFSKVV 72
VR P KWT EE + F L YGR W +I G++T +Q++S+A+++F
Sbjct: 109 VRSPTKPGSYSLKWTSEEKELFEQGLVKYGRRWTKIAKLIGSRTVLQVKSYARQYFKNKA 168
Query: 73 RESNGSSE 80
+ E
Sbjct: 169 KNDGSERE 176
>sp|Q5VVJ2|MYSM1_HUMAN Histone H2A deubiquitinase MYSM1 OS=Homo sapiens GN=MYSM1 PE=1 SV=1
Length = 828
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 28 KWTEEEHQRFLDALKMYGRGWRQIE---GTKTAVQIRSHAQKFFSKVVR 73
KWT EE + F L +GR W +I G++T +Q++S+A+++F V+
Sbjct: 120 KWTIEEKELFEQGLAKFGRRWTKISKLIGSRTVLQVKSYARQYFKNKVK 168
>sp|Q69Z66|MYSM1_MOUSE Histone H2A deubiquitinase MYSM1 OS=Mus musculus GN=Mysm1 PE=2 SV=2
Length = 819
Score = 38.9 bits (89), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 28 KWTEEEHQRFLDALKMYGRGWRQIE---GTKTAVQIRSHAQKFFSKVVR 73
KWT EE + F L +GR W +I ++T +Q++S+A+++F V+
Sbjct: 117 KWTVEEKELFEQGLAKFGRRWTKIATLLKSRTVLQVKSYARQYFKNKVK 165
>sp|Q8BXN7|PPM1K_MOUSE Protein phosphatase 1K, mitochondrial OS=Mus musculus GN=Ppm1k PE=1
SV=1
Length = 372
Score = 38.1 bits (87), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 20/127 (15%)
Query: 85 PIEIPPPRPKRKPVHPYPRKSVDSLKATS-VSNQQENFTSSNALVSDKDRQSPTSVVSAF 143
PI +PP KP+ P+ S++++ S + ++EN +DR +
Sbjct: 74 PILLPPSIKYGKPI---PKISLENVGCASLIGKRKEN----------EDRFG----FAQL 116
Query: 144 NSDTLGCAASDQQNGCSSPTSCTTEMHS--VNLLPIEKENEYVTSISFPKEEKISTLPAH 201
+ L A D G ++ C T M ++LLP EK+ E V +++F + +K AH
Sbjct: 117 TEEVLYFAVYDGHGGPAAADFCHTHMEKCVMDLLPREKDLETVLTLAFLEIDKAFASYAH 176
Query: 202 LSASSNV 208
LSA +++
Sbjct: 177 LSADASL 183
>sp|Q55GK3|MYBM_DICDI Myb-like protein M OS=Dictyostelium discoideum GN=mybM PE=3 SV=1
Length = 669
Score = 37.7 bits (86), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Query: 22 ITKQREKWTEEEHQRFLDALKMYG-RGWRQIE----GTKTAVQIRSHAQKFFSKVVRES 75
I + KWTEEE Q+ + +YG + W++I G KT Q H ++ S +R+
Sbjct: 63 IRRSPNKWTEEEDQKLFQLVSIYGEKKWKRISAEMGGQKTGAQCAQHWKRVLSPDIRKG 121
>sp|Q2PC20|PPM1K_BOVIN Protein phosphatase 1K, mitochondrial OS=Bos taurus GN=PPM1K PE=2
SV=1
Length = 372
Score = 36.6 bits (83), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 18/126 (14%)
Query: 85 PIEIPPPRPKRKPVHPYPRKSVDSLKATSVSNQQENFTSSNALVSDKDRQSPTSVVSAFN 144
PI +PP KP+ ++V S A+ + ++EN +DR +
Sbjct: 74 PILLPPSIKYGKPIPKVSLQNVGS--ASQIGKRKEN----------EDRFG----FAQLT 117
Query: 145 SDTLGCAASDQQNGCSSPTSCTTEMHS--VNLLPIEKENEYVTSISFPKEEKISTLPAHL 202
++ L A D G ++ C T M ++LLP E+ E V +++F + +K AHL
Sbjct: 118 NEVLYFAVYDGHGGPAAADFCHTHMEKCILDLLPKEENLETVLTLAFLEIDKTFARHAHL 177
Query: 203 SASSNV 208
SA + +
Sbjct: 178 SADATL 183
>sp|Q9M9B9|ARR19_ARATH Putative two-component response regulator ARR19 OS=Arabidopsis
thaliana GN=ARR19 PE=2 SV=2
Length = 407
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 6/44 (13%)
Query: 2 SNSLYSFENDSLPKVRKPYTITKQREKWTEEEHQRFLDALKMYG 45
N + + E K RKP R WTEE HQ+FL+A+++ G
Sbjct: 199 GNGIQNMEKKQGKKPRKP------RMTWTEELHQKFLEAIEIIG 236
>sp|O08837|CDC5L_RAT Cell division cycle 5-like protein OS=Rattus norvegicus GN=Cdc5l
PE=1 SV=2
Length = 802
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Query: 28 KWTEEEHQRFLDALKMYGRGWRQIEGT--KTAVQIRSHAQKFFSKVVRESNGSSESSIMP 85
+W+ EE ++ L K+ WR I +TA Q H + K + N E++ P
Sbjct: 62 EWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKTAQRDN-EEETTDDP 120
Query: 86 IEIPP----PRPKRKPVHPYP 102
++ P P P+ KP P P
Sbjct: 121 RKLKPGEIDPNPETKPARPDP 141
>sp|Q6A068|CDC5L_MOUSE Cell division cycle 5-like protein OS=Mus musculus GN=Cdc5l PE=1
SV=2
Length = 802
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Query: 28 KWTEEEHQRFLDALKMYGRGWRQIEGT--KTAVQIRSHAQKFFSKVVRESNGSSESSIMP 85
+W+ EE ++ L K+ WR I +TA Q H + K + N E++ P
Sbjct: 62 EWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKTAQRDN-EEETTDDP 120
Query: 86 IEIPP----PRPKRKPVHPYP 102
++ P P P+ KP P P
Sbjct: 121 RKLKPGEIDPNPETKPARPDP 141
>sp|Q2KJC1|CDC5L_BOVIN Cell division cycle 5-like protein OS=Bos taurus GN=CDC5L PE=2 SV=1
Length = 802
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Query: 28 KWTEEEHQRFLDALKMYGRGWRQIEGT--KTAVQIRSHAQKFFSKVVRESNGSSESSIMP 85
+W+ EE ++ L K+ WR I +TA Q H + K + N E++ P
Sbjct: 62 EWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKAAQRDN-EEETTDDP 120
Query: 86 IEIPP----PRPKRKPVHPYP 102
++ P P P+ KP P P
Sbjct: 121 RKLKPGEIDPNPETKPARPDP 141
>sp|Q99459|CDC5L_HUMAN Cell division cycle 5-like protein OS=Homo sapiens GN=CDC5L PE=1
SV=2
Length = 802
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Query: 28 KWTEEEHQRFLDALKMYGRGWRQIEGT--KTAVQIRSHAQKFFSKVVRESNGSSESSIMP 85
+W+ EE ++ L K+ WR I +TA Q H + K + N E++ P
Sbjct: 62 EWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKAAQRDN-EEETTDDP 120
Query: 86 IEIPP----PRPKRKPVHPYP 102
++ P P P+ KP P P
Sbjct: 121 RKLKPGEIDPNPETKPARPDP 141
>sp|Q9UKL0|RCOR1_HUMAN REST corepressor 1 OS=Homo sapiens GN=RCOR1 PE=1 SV=1
Length = 482
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Query: 17 RKPYTITKQREKWTEEEHQRFLDALKMYGRGWRQIE---GTKTAVQIRSHAQKFFSKVVR 73
R P I K +WT EE + A++ YGR ++ I G K+ VQ+++ FF R
Sbjct: 371 RLPEVIQKCNARWTTEEQLLAVQAIRKYGRDFQAISDVIGNKSVVQVKN----FFVNYRR 426
Query: 74 ESN 76
N
Sbjct: 427 RFN 429
>sp|Q8CFE3|RCOR1_MOUSE REST corepressor 1 OS=Mus musculus GN=Rcor1 PE=1 SV=2
Length = 477
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Query: 17 RKPYTITKQREKWTEEEHQRFLDALKMYGRGWRQIE---GTKTAVQIRSHAQKFFSKVVR 73
R P I K +WT EE + A++ YGR ++ I G K+ VQ+++ FF R
Sbjct: 365 RLPEVIQKCNARWTTEEQLLAVQAIRKYGRDFQAISDVIGNKSVVQVKN----FFVNYRR 420
Query: 74 ESN 76
N
Sbjct: 421 RFN 423
>sp|Q86HX9|MYBK_DICDI Myb-like protein K OS=Dictyostelium discoideum GN=mybK PE=3 SV=1
Length = 894
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Query: 29 WTEEEHQRFLDALKMYG-RGWRQIE---GTKTAVQIRSHAQKFF 68
WT EEH +FL+A++ +G + + I T+ Q+R+H +
Sbjct: 657 WTSEEHNKFLEAVQQFGIKDYHAIAKFVQTRNHHQVRTHVNTYL 700
>sp|Q10274|MU152_SCHPO Meiotically up-regulated gene 152 protein OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mug152 PE=1 SV=1
Length = 390
Score = 33.1 bits (74), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 17 RKPYTITKQREKWTEEEHQRFLDALKMYGRG-WRQI 51
RKP + K R KWTE+E L +++G G W++I
Sbjct: 46 RKPTKVRKPRVKWTEKETNDLLRGCQIHGVGNWKKI 81
>sp|Q54QC0|MYBU_DICDI Myb-like protein U OS=Dictyostelium discoideum GN=mybU PE=4 SV=1
Length = 2381
Score = 33.1 bits (74), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 8/53 (15%)
Query: 14 PKVRKPYTITKQREKWTEEEHQRFLDALKMYGRGWRQIE----GTKTAVQIRS 62
P V+K + Q W EEE F + YGR W+ + GTK+ QI++
Sbjct: 845 PNVQKHF----QPTIWHEEEKLLFRELFCAYGRDWQMVSTLMCGTKSPTQIKN 893
>sp|B0G0Y5|MYBAA_DICDI Myb-like protein AA OS=Dictyostelium discoideum GN=mybAA PE=3 SV=1
Length = 971
Score = 32.7 bits (73), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 25 QREKWTEEEHQRFLDALKMYGRGWRQIEGT---KTAVQIRSH 63
+R+ WT EE + LDA YG W +I +T I++H
Sbjct: 808 KRDAWTLEEDRIILDAHSKYGNKWAEISKLLPGRTNCAIKNH 849
>sp|Q5ZKT9|MIER1_CHICK Mesoderm induction early response protein 1 OS=Gallus gallus
GN=MIER1 PE=2 SV=1
Length = 513
Score = 32.7 bits (73), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 7/55 (12%)
Query: 11 DSLPKVRKPYTITKQREK---WTEEEHQRFLDALKMYGRGWRQIEGTKTAVQIRS 62
+SL ++R + + RE+ WTEEE + F LK+YG+ + I+ K V+ RS
Sbjct: 271 ESLRRLR--FNVKAAREELSVWTEEECRNFEQGLKVYGKDFHVIQANK--VRTRS 321
>sp|Q54YB7|MYBF_DICDI Myb-like protein F OS=Dictyostelium discoideum GN=mybF PE=3 SV=1
Length = 564
Score = 32.7 bits (73), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 26 REKWTEEEHQRFLDALKMYGRGWRQIEG---TKTAVQIRSHAQ 65
R WT EE + + + YG+ W++I+ K+ Q+ SH Q
Sbjct: 414 RTVWTLEEEELYKEVFNHYGKNWKKIKTHFPDKSKSQVTSHGQ 456
>sp|Q9SAK5|APL_ARATH Myb family transcription factor APL OS=Arabidopsis thaliana
GN=APL PE=2 SV=2
Length = 358
Score = 32.3 bits (72), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 9/53 (16%)
Query: 24 KQREKWTEEEHQRFLDALKMYG-------RGWRQIEGTK--TAVQIRSHAQKF 67
K R +WT E H+RF+DA+ G + ++ G K T ++SH QKF
Sbjct: 34 KPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKF 86
>sp|Q90WN5|RCOR1_XENLA REST corepressor 1 OS=Xenopus laevis GN=rcor1 PE=2 SV=1
Length = 431
Score = 32.3 bits (72), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 7/52 (13%)
Query: 28 KWTEEEHQRFLDALKMYGRGWRQIE---GTKTAVQIRSHAQKFFSKVVRESN 76
+WT EE + A++MYGR ++ I G K+ VQ+++ FF R N
Sbjct: 331 RWTTEEQLLAVQAIRMYGRDFQAISDVIGNKSVVQVKN----FFVNYRRRFN 378
>sp|Q5R522|PPM1K_PONAB Protein phosphatase 1K, mitochondrial OS=Pongo abelii GN=PPM1K PE=2
SV=1
Length = 327
Score = 32.3 bits (72), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 20/127 (15%)
Query: 85 PIEIPPPRPKRKPVHPYPRKSVDSLK-ATSVSNQQENFTSSNALVSDKDRQSPTSVVSAF 143
PI +PP KP+ P+ S++++ A+ + ++EN +DR +
Sbjct: 74 PILLPPSIKYGKPI---PKISLENVGCASQIGKRKEN----------EDRFD----FAQL 116
Query: 144 NSDTLGCAASDQQNGCSSPTSCTTEMHS--VNLLPIEKENEYVTSISFPKEEKISTLPAH 201
+ L A D G ++ C T M ++LLP EK E + +++F + +K + A
Sbjct: 117 TDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLETLLTLAFLEIDKAFSSHAR 176
Query: 202 LSASSNV 208
LSA + +
Sbjct: 177 LSADATL 183
>sp|Q8N3J5|PPM1K_HUMAN Protein phosphatase 1K, mitochondrial OS=Homo sapiens GN=PPM1K PE=1
SV=1
Length = 372
Score = 32.3 bits (72), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 20/127 (15%)
Query: 85 PIEIPPPRPKRKPVHPYPRKSVDSLK-ATSVSNQQENFTSSNALVSDKDRQSPTSVVSAF 143
PI +PP KP+ P+ S++++ A+ + ++EN +DR +
Sbjct: 74 PILLPPSIKYGKPI---PKISLENVGCASQIGKRKEN----------EDRFD----FAQL 116
Query: 144 NSDTLGCAASDQQNGCSSPTSCTTEMHS--VNLLPIEKENEYVTSISFPKEEKISTLPAH 201
+ L A D G ++ C T M ++LLP EK E + +++F + +K + A
Sbjct: 117 TDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLETLLTLAFLEIDKAFSSHAR 176
Query: 202 LSASSNV 208
LSA + +
Sbjct: 177 LSADATL 183
>sp|Q5APG6|CEF1_CANAL Pre-mRNA-splicing factor CEF1 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=CEF1 PE=3 SV=1
Length = 610
Score = 32.3 bits (72), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 29 WTEEEHQRFLDALKMYGRGWRQIEG--TKTAVQIRSHAQKFFSKVVRESNGSSESSI 83
WT+EE ++ L+ K++ WR I +TAVQ QK + G E ++
Sbjct: 64 WTKEEDEKLLNLHKIFPNQWRSISNILNRTAVQCVERYQKLIDEAAGIKPGDDEENL 120
>sp|Q54K19|MYBD_DICDI Myb-like protein D OS=Dictyostelium discoideum GN=mybD PE=3 SV=1
Length = 595
Score = 32.0 bits (71), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Query: 29 WTEEEHQRFLDALKMYGRGWRQIE---GTKTAVQIRSHAQ 65
WT+EE ++ YG+ W+ I KT Q++SH Q
Sbjct: 443 WTQEEDEKMAQLYNKYGKSWKAIHSHFDDKTREQVQSHGQ 482
>sp|Q8IYH5|ZZZ3_HUMAN ZZ-type zinc finger-containing protein 3 OS=Homo sapiens GN=ZZZ3
PE=1 SV=1
Length = 903
Score = 32.0 bits (71), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 9/54 (16%)
Query: 29 WTEEEHQRFLDALKMY------GRGWRQIE---GTKTAVQIRSHAQKFFSKVVR 73
WT EE ++ L Y R W++I G +TA Q+ S QK+F K+ +
Sbjct: 655 WTVEEQKKLEQLLIKYPPEEVESRRWQKIADELGNRTAKQVASRVQKYFIKLTK 708
>sp|Q6KAQ7|ZZZ3_MOUSE ZZ-type zinc finger-containing protein 3 OS=Mus musculus GN=Zzz3
PE=2 SV=2
Length = 910
Score = 32.0 bits (71), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 9/54 (16%)
Query: 29 WTEEEHQRFLDALKMY------GRGWRQIE---GTKTAVQIRSHAQKFFSKVVR 73
WT EE ++ L Y R W++I G +TA Q+ S QK+F K+ +
Sbjct: 662 WTVEEQKKLEQLLLKYPPEEVESRRWQKIADELGNRTAKQVASRVQKYFIKLTK 715
>sp|Q6A332|ALY3_ARATH Protein ALWAYS EARLY 3 OS=Arabidopsis thaliana GN=ALY3 PE=1 SV=1
Length = 1132
Score = 31.6 bits (70), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 9/40 (22%)
Query: 23 TKQREK---------WTEEEHQRFLDALKMYGRGWRQIEG 53
TKQR++ W++EE +RF + + +G+ W+++ G
Sbjct: 32 TKQRKRKLSDMLGPQWSKEELERFYEGYRKFGKEWKKVAG 71
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.125 0.362
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 109,369,487
Number of Sequences: 539616
Number of extensions: 4210908
Number of successful extensions: 12686
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 141
Number of HSP's that attempted gapping in prelim test: 12324
Number of HSP's gapped (non-prelim): 400
length of query: 303
length of database: 191,569,459
effective HSP length: 117
effective length of query: 186
effective length of database: 128,434,387
effective search space: 23888795982
effective search space used: 23888795982
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (28.1 bits)