BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 022045
         (303 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|313586459|gb|ADR71240.1| 60S ribosomal protein L3B [Hevea brasiliensis]
          Length = 389

 Score =  560 bits (1443), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 269/316 (85%), Positives = 290/316 (91%), Gaps = 16/316 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDP+KPC+LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCKLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTI+ETPP+V+VGVVGYVKTPRGLR+L TVWAQHL+EEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIVETPPMVIVGVVGYVKTPRGLRTLNTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NWCKSKKKAFTKY+K+YETDDGKK IQAQLEK+KKY  V+R               KKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYETDDGKKSIQAQLEKIKKYAHVVRVLAHTQIRKMKGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQVNGG++AQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA QESH+A+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAGQESHTAIT 300

Query: 286 EFDRSVYLLSSLMGSF 301
           ++DR+   ++  MG F
Sbjct: 301 DYDRTEKDITP-MGGF 315


>gi|313586457|gb|ADR71239.1| 60S ribosomal protein L3A [Hevea brasiliensis]
          Length = 389

 Score =  559 bits (1441), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 269/316 (85%), Positives = 290/316 (91%), Gaps = 16/316 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDP+KPC+LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCKLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTI+ETPP+V+VGVVGYVKTPRGLR+L TVWAQHL+EEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIVETPPMVIVGVVGYVKTPRGLRTLNTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NWCKSKKKAFTKY+K+YETDDGKK IQAQLEK+KKY  V+R               KKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYETDDGKKSIQAQLEKIKKYAHVVRVLAHTQIRKMKGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQVNGG++AQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA QESH+A+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAGQESHTAIT 300

Query: 286 EFDRSVYLLSSLMGSF 301
           ++DR+   ++  MG F
Sbjct: 301 DYDRTEKDITP-MGGF 315


>gi|147833564|emb|CAN63848.1| hypothetical protein VITISV_039858 [Vitis vinifera]
          Length = 389

 Score =  558 bits (1439), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 266/316 (84%), Positives = 289/316 (91%), Gaps = 16/316 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTI+ETPP+V+VGVV YVKTPRGLRSL TVWAQHL+EEV+RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLNTVWAQHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NWCKSKKKAFTKY+K+YET++GKK IQAQLEKMKKY +VIR               KKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYETEEGKKSIQAQLEKMKKYASVIRVLAHTQIRKMKGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQVNGG++AQKVD+AYGFFEKQ+P+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK  QESH+A+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKIEQESHTALT 300

Query: 286 EFDRSVYLLSSLMGSF 301
           EFDR+   ++  MG F
Sbjct: 301 EFDRTEKDITP-MGGF 315


>gi|225460636|ref|XP_002265125.1| PREDICTED: 60S ribosomal protein L3-like [Vitis vinifera]
          Length = 397

 Score =  558 bits (1439), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 266/316 (84%), Positives = 289/316 (91%), Gaps = 16/316 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVR+V
Sbjct: 9   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVREV 68

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTI+ETPP+V+VGVV YVKTPRGLRSL TVWAQHL+EEV+RRFYK
Sbjct: 69  EKPGSKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLNTVWAQHLSEEVKRRFYK 128

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NWCKSKKKAFTKY+K+YET++GKK IQAQLEKMKKY +VIR               KKAH
Sbjct: 129 NWCKSKKKAFTKYSKQYETEEGKKSIQAQLEKMKKYASVIRVLAHTQIRKMKGLKQKKAH 188

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQVNGG++AQKVD+AYGFFEKQ+P+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 189 LMEIQVNGGTIAQKVDYAYGFFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 248

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK  QESH+A+T
Sbjct: 249 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKIEQESHTALT 308

Query: 286 EFDRSVYLLSSLMGSF 301
           EFDR+   ++  MG F
Sbjct: 309 EFDRTEKDITP-MGGF 323


>gi|296081197|emb|CBI18223.3| unnamed protein product [Vitis vinifera]
          Length = 449

 Score =  558 bits (1438), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 266/316 (84%), Positives = 289/316 (91%), Gaps = 16/316 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVR+V
Sbjct: 61  MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVREV 120

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTI+ETPP+V+VGVV YVKTPRGLRSL TVWAQHL+EEV+RRFYK
Sbjct: 121 EKPGSKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLNTVWAQHLSEEVKRRFYK 180

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NWCKSKKKAFTKY+K+YET++GKK IQAQLEKMKKY +VIR               KKAH
Sbjct: 181 NWCKSKKKAFTKYSKQYETEEGKKSIQAQLEKMKKYASVIRVLAHTQIRKMKGLKQKKAH 240

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQVNGG++AQKVD+AYGFFEKQ+P+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 241 LMEIQVNGGTIAQKVDYAYGFFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 300

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK  QESH+A+T
Sbjct: 301 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKIEQESHTALT 360

Query: 286 EFDRSVYLLSSLMGSF 301
           EFDR+   ++  MG F
Sbjct: 361 EFDRTEKDITP-MGGF 375


>gi|350539715|ref|NP_001233997.1| ribosomal protein L3 [Solanum lycopersicum]
 gi|38327504|gb|AAR17783.1| ribosomal protein L3 [Solanum lycopersicum]
          Length = 389

 Score =  556 bits (1433), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 264/314 (84%), Positives = 287/314 (91%), Gaps = 15/314 (4%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDPSKPC+LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCKLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTI+ETPP+V+VGVVGYVKTPRGLR L TVWAQHL+E+++RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIVETPPMVIVGVVGYVKTPRGLRCLNTVWAQHLSEDIKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NWCKSKKKAF KY+KKYETD+GKKDIQAQLEK+KKY  VIR               KKAH
Sbjct: 121 NWCKSKKKAFLKYSKKYETDEGKKDIQAQLEKLKKYACVIRVLAHTQIRKMKGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQVNGGS+AQKVDFAYGFFEKQ+P+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGSIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YKLGK  QESH+A+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKVGQESHTALT 300

Query: 286 EFDRSVYLLSSLMG 299
           EFDR+   ++ + G
Sbjct: 301 EFDRTEKDITPIGG 314


>gi|82623411|gb|ABB87120.1| ribosomal protein L3-like [Solanum tuberosum]
          Length = 389

 Score =  556 bits (1433), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 264/314 (84%), Positives = 287/314 (91%), Gaps = 15/314 (4%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDPSKPC+LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCKLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTI+ETPP+V+VGVVGYVKTPRGLR L TVWAQHL+E+++RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIVETPPMVIVGVVGYVKTPRGLRCLNTVWAQHLSEDIKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NWCKSKKKAF KY+KKYETD+GKKDIQAQLEK+KKY  VIR               KKAH
Sbjct: 121 NWCKSKKKAFLKYSKKYETDEGKKDIQAQLEKLKKYACVIRVLAHTQIRKMKGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQVNGGS+AQKVDFAYGFFEKQ+P+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGSIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YKLGK  QESH+A+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKVGQESHTAVT 300

Query: 286 EFDRSVYLLSSLMG 299
           EFDR+   ++ + G
Sbjct: 301 EFDRTEKEITPIGG 314


>gi|255566636|ref|XP_002524302.1| 60S ribosomal protein L3, putative [Ricinus communis]
 gi|223536393|gb|EEF38042.1| 60S ribosomal protein L3, putative [Ricinus communis]
          Length = 389

 Score =  553 bits (1426), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 264/314 (84%), Positives = 287/314 (91%), Gaps = 15/314 (4%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRASR RGKVKAFPKDDP+KPC+LTAFLGYKAGMTHI+R+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRQRGKVKAFPKDDPTKPCKLTAFLGYKAGMTHIMREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTIIETPP+V+VGVVGYVKTPRGLRSL TVWAQHL+EEV+RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVIVGVVGYVKTPRGLRSLNTVWAQHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NWCKSKKKAFTKY+++ ET++GKK IQAQLEKMKKY TVIR               KKAH
Sbjct: 121 NWCKSKKKAFTKYSRQLETEEGKKSIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQVNGG++AQKVDFAYGFFEKQ+PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIAQKVDFAYGFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK  QESH+A+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKGGQESHTAIT 300

Query: 286 EFDRSVYLLSSLMG 299
           E+DR+   ++ + G
Sbjct: 301 EYDRTEKDITPIGG 314


>gi|37625023|gb|AAQ96335.1| ribosomal protein L3A [Nicotiana tabacum]
          Length = 389

 Score =  552 bits (1423), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 264/316 (83%), Positives = 288/316 (91%), Gaps = 16/316 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDP+KPC+LTAFLGYKAGMTHIVRDV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPNKPCKLTAFLGYKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTIIETPP+V+VGVVGYVKTPRGLR L TVWAQHL+EE++RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVIVGVVGYVKTPRGLRCLNTVWAQHLSEELKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NWCKSKKKAF KY+KKYE+D+GKKDIQ QLEK+KKY  VIR               KKAH
Sbjct: 121 NWCKSKKKAFLKYSKKYESDEGKKDIQTQLEKLKKYACVIRVLAHTQIRKMKGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQVNGG++AQKVDFAYGFFEKQ+P+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YKLGKA QESH+A+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKLGKAGQESHAAVT 300

Query: 286 EFDRSVYLLSSLMGSF 301
           +FDR+   ++  MG F
Sbjct: 301 DFDRTEKDITP-MGGF 315


>gi|359486157|ref|XP_002263053.2| PREDICTED: 60S ribosomal protein L3 [Vitis vinifera]
 gi|297739519|emb|CBI29701.3| unnamed protein product [Vitis vinifera]
          Length = 389

 Score =  548 bits (1412), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 272/316 (86%), Positives = 289/316 (91%), Gaps = 16/316 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDP+ PCRLTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPTNPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTIIETPP+VVVGVVGY+KTPRGLRSL TVWAQHL+EEV+RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYLKTPRGLRSLNTVWAQHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NWCKSKKKAFTKY+KKYE++DGKKDIQAQLEKMKKYC VIR               KKAH
Sbjct: 121 NWCKSKKKAFTKYSKKYESEDGKKDIQAQLEKMKKYCNVIRVLAHTQIRKMKGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQVNGG VA+KVD+AYGFFEKQIPIDA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVAKKVDYAYGFFEKQIPIDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYK+GK  QESHSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKVGKTGQESHSAMT 300

Query: 286 EFDRSVYLLSSLMGSF 301
           EFDR+   ++  MG F
Sbjct: 301 EFDRTEKDITP-MGGF 315


>gi|147865994|emb|CAN83050.1| hypothetical protein VITISV_042376 [Vitis vinifera]
          Length = 389

 Score =  546 bits (1408), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 272/316 (86%), Positives = 289/316 (91%), Gaps = 16/316 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFL RKRA+RHRGKVKAFPKDDP+KPCRLTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLXRKRAARHRGKVKAFPKDDPTKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTIIETPP+VVVGVVGY+KTPRGLRSL TVWAQHL+EEV+RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYLKTPRGLRSLNTVWAQHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NWCKSKKKAFTKY+KKYE++DGKKDIQAQLEKMKKYC VIR               KKAH
Sbjct: 121 NWCKSKKKAFTKYSKKYESEDGKKDIQAQLEKMKKYCNVIRVLAHTQIRKMKGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQVNGG VA+KVD+AYGFFEKQIPIDA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVAKKVDYAYGFFEKQIPIDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYK+GK  QESHSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKVGKTGQESHSAMT 300

Query: 286 EFDRSVYLLSSLMGSF 301
           EFDR+   ++  MG F
Sbjct: 301 EFDRTEKDITP-MGGF 315


>gi|449441226|ref|XP_004138383.1| PREDICTED: 60S ribosomal protein L3-like [Cucumis sativus]
 gi|449499176|ref|XP_004160742.1| PREDICTED: 60S ribosomal protein L3-like [Cucumis sativus]
          Length = 389

 Score =  546 bits (1408), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 260/316 (82%), Positives = 286/316 (90%), Gaps = 16/316 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDD +KPCRLTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCE VTIIETPP+V+VGVVGYVKTPRGLR+L TVWAQHL+EEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NWCKSKKKAF KY+K+YETD+GKK IQ +LEK+KKY +VIR               KKAH
Sbjct: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQVNGGS+AQKVD+AYGFFEKQ+P++AVFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YK+GK  QESH+A+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKIGKTGQESHTAIT 300

Query: 286 EFDRSVYLLSSLMGSF 301
           EFDR+   ++  MG F
Sbjct: 301 EFDRTEKDITP-MGGF 315


>gi|224066623|ref|XP_002302168.1| predicted protein [Populus trichocarpa]
 gi|118483469|gb|ABK93633.1| unknown [Populus trichocarpa]
 gi|222843894|gb|EEE81441.1| predicted protein [Populus trichocarpa]
          Length = 389

 Score =  546 bits (1408), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 258/314 (82%), Positives = 286/314 (91%), Gaps = 15/314 (4%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVK+FPKDDP+KPC+LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKSFPKDDPNKPCKLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTIIETPP+V+VGVVGY+KTP GLR+L TVWAQHL+EEV+RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVIVGVVGYLKTPSGLRTLNTVWAQHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NWCKSKK+AF KY+K+YETD+GKK IQ+QLEK+KKY TVIR               KKAH
Sbjct: 121 NWCKSKKRAFNKYSKQYETDEGKKSIQSQLEKLKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQVNGG++AQKVDFAYGFFEKQ+PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIAQKVDFAYGFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKKIYKLGK  QE H+A+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKLGKTGQECHTAIT 300

Query: 286 EFDRSVYLLSSLMG 299
           E+DR+   ++ + G
Sbjct: 301 EYDRTEKDITPIGG 314


>gi|224082478|ref|XP_002306708.1| predicted protein [Populus trichocarpa]
 gi|118481111|gb|ABK92509.1| unknown [Populus trichocarpa]
 gi|222856157|gb|EEE93704.1| predicted protein [Populus trichocarpa]
          Length = 389

 Score =  546 bits (1407), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 256/314 (81%), Positives = 287/314 (91%), Gaps = 15/314 (4%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVK+FPKDDP+KPC+LT+FLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKSFPKDDPTKPCKLTSFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTI+ETPP+V+VGVVGY+KTP GLR+L TVWAQHL+EEV+RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIVETPPMVIVGVVGYLKTPSGLRTLNTVWAQHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NWCKSKKKAF KY+K+YETD+GKK IQ+QLEK+KKY TVIR               KKAH
Sbjct: 121 NWCKSKKKAFAKYSKQYETDEGKKSIQSQLEKLKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQVNGG++AQKVDFAYGFFEKQ+PIDAVFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIAQKVDFAYGFFEKQVPIDAVFQKDEMIDVIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKKIYK+GK  QE+H+A+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKVGKVGQETHTAIT 300

Query: 286 EFDRSVYLLSSLMG 299
           E+DR+   ++ L G
Sbjct: 301 EYDRTEKDITPLGG 314


>gi|356535772|ref|XP_003536417.1| PREDICTED: 60S ribosomal protein L3-like [Glycine max]
          Length = 389

 Score =  545 bits (1404), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 261/316 (82%), Positives = 287/316 (90%), Gaps = 16/316 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDPSK  +LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKAPKLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCE VTIIETPP+V+VGVVGYVKTPRGLR+L TVWAQHL+EE++RRFYK
Sbjct: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLNTVWAQHLSEELKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NWCKSKKKAFTKY+K+YET++GKK+I+AQLEK+KKY TV+R               KKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYETEEGKKNIEAQLEKLKKYATVVRVLAHTQIRKMKGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           +MEIQVNGGS+AQKVDFAY FFEKQ+PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 IMEIQVNGGSIAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKK+YKLGKA  ESHSA+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKVYKLGKAGDESHSALT 300

Query: 286 EFDRSVYLLSSLMGSF 301
           EFDR+   ++  MG F
Sbjct: 301 EFDRTEKDITP-MGGF 315


>gi|356576067|ref|XP_003556156.1| PREDICTED: 60S ribosomal protein L3-like [Glycine max]
          Length = 389

 Score =  543 bits (1399), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 258/314 (82%), Positives = 286/314 (91%), Gaps = 15/314 (4%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDPSK  +LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKAPKLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCE VTIIETPP+V+VGVVGYVKTPRGLR+L TVWAQHL+EE++RRFYK
Sbjct: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLNTVWAQHLSEELKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NWCKSKKKAFTKY+K+YET++GKK+I+AQLEK+KKY TV+R               KKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYETEEGKKNIEAQLEKLKKYATVVRVLAHTQIRKMKGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           +MEIQVNGG++AQKVDFAY FFEKQ+PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 IMEIQVNGGTIAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKK+YKLGKA  ESHSA+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKVYKLGKAGDESHSALT 300

Query: 286 EFDRSVYLLSSLMG 299
           EFDR+   ++ + G
Sbjct: 301 EFDRTEKDITPIGG 314


>gi|255642195|gb|ACU21362.1| unknown [Glycine max]
          Length = 389

 Score =  542 bits (1396), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 257/314 (81%), Positives = 285/314 (90%), Gaps = 15/314 (4%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDPSK  +LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKAPKLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCE VTIIETPP+V+VGVVGYVKTPRGLR+L TVWAQHL+EE++RRFYK
Sbjct: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLNTVWAQHLSEELKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NWCKSKKKAFTKY+K+YET++GKK+I+AQLEK+KKY TV+R               KKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYETEEGKKNIEAQLEKLKKYATVVRVLAHTQIRKMKGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           +MEIQVNGG++AQKVDFAY F EKQ+PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 IMEIQVNGGTIAQKVDFAYSFLEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKK+YKLGKA  ESHSA+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKVYKLGKAGDESHSALT 300

Query: 286 EFDRSVYLLSSLMG 299
           EFDR+   ++ + G
Sbjct: 301 EFDRTEKDITPIGG 314


>gi|37625025|gb|AAQ96336.1| ribosomal protein L3B [Nicotiana tabacum]
          Length = 409

 Score =  542 bits (1396), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 265/336 (78%), Positives = 285/336 (84%), Gaps = 36/336 (10%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDD +KPCRLTAFLGYKAGMTHIVRDV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDTTKPCRLTAFLGYKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCE VTIIETPP++VVGVVGYVKTPRGLR L TVWAQHL+EE++RRFYK
Sbjct: 61  EKPGSKLHKKETCELVTIIETPPMIVVGVVGYVKTPRGLRCLSTVWAQHLSEEIKRRFYK 120

Query: 121 --------------------NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVI 160
                               NWC SKKKAF KY+KKYETDDGKKDI AQLEKMKKYC VI
Sbjct: 121 NWCMSKKKAFAKYSKKYETDNWCMSKKKAFAKYSKKYETDDGKKDINAQLEKMKKYCCVI 180

Query: 161 R---------------KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDI 205
           R               KKAHLMEIQVNGG V+QKVD+AYGFFEKQIP+DA+FQKDEMIDI
Sbjct: 181 RVLAHTQIRKMKGLKQKKAHLMEIQVNGGDVSQKVDYAYGFFEKQIPVDAIFQKDEMIDI 240

Query: 206 IGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE 265
           IGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE
Sbjct: 241 IGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTE 300

Query: 266 MNKKIYKLGKASQESHSAMTEFDRSVYLLSSLMGSF 301
           +NKK+Y+LGKA QESHSA+TEFDR+   ++  MG F
Sbjct: 301 LNKKVYRLGKAGQESHSAITEFDRTEKDITP-MGGF 335


>gi|116783991|gb|ABK23172.1| unknown [Picea sitchensis]
          Length = 389

 Score =  538 bits (1386), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 255/316 (80%), Positives = 283/316 (89%), Gaps = 16/316 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRA RHRGKVK+FP+DDPSKPC+LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPRDDPSKPCKLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVT+IETPP+V+VGVVGY+KTPRGLR+L  VWAQHL+EEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTLIETPPMVIVGVVGYIKTPRGLRTLNAVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NW ++KKKAFTKY KKY++++GKK+IQ +LEKMKKY TVIR                KAH
Sbjct: 121 NWYRAKKKAFTKYAKKYDSEEGKKEIQTELEKMKKYATVIRVLAHTQIKKMKGLKQNKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQVNGG+V QKVD+AY FFEKQ+PIDA+FQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTVPQKVDYAYNFFEKQVPIDALFQKDEMIDVIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYK+GK  QESH+AMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKKDQESHNAMT 300

Query: 286 EFDRSVYLLSSLMGSF 301
           EFDR+   ++  MG F
Sbjct: 301 EFDRTEKDITP-MGGF 315


>gi|116791630|gb|ABK26048.1| unknown [Picea sitchensis]
 gi|224285374|gb|ACN40410.1| unknown [Picea sitchensis]
          Length = 389

 Score =  538 bits (1385), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 258/316 (81%), Positives = 284/316 (89%), Gaps = 16/316 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRA RHRGKVK+FP+DD SKPC+LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPRDDQSKPCKLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVT+IETPP+V+VGVV Y+KTPRGLR+L TVWAQHL+EEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTLIETPPMVIVGVVAYIKTPRGLRTLNTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NW ++KKKAFTKY KKY++++GKKDIQ +LEKMKKY TVIR               KKAH
Sbjct: 121 NWYRAKKKAFTKYAKKYDSEEGKKDIQTELEKMKKYATVIRVLAHTQIKKMKGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQVNGG+VAQKVD+AY FFEKQ+PIDA+FQKDEM+DIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTVAQKVDYAYNFFEKQVPIDALFQKDEMVDIIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYK+GKA QESH AMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKADQESHKAMT 300

Query: 286 EFDRSVYLLSSLMGSF 301
           EFDR+   ++  MG F
Sbjct: 301 EFDRTEKDITP-MGGF 315


>gi|255570998|ref|XP_002526450.1| 60S ribosomal protein L3, putative [Ricinus communis]
 gi|223534230|gb|EEF35945.1| 60S ribosomal protein L3, putative [Ricinus communis]
          Length = 389

 Score =  537 bits (1384), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 269/314 (85%), Positives = 285/314 (90%), Gaps = 15/314 (4%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRASR RGKVKAFPKDDP KPCRLTAFLGYKAGMTHIVRDV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRQRGKVKAFPKDDPKKPCRLTAFLGYKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTIIETPP+VVVGVVGYVKTPRGLRSL TVWAQHL+E+V+RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLNTVWAQHLSEDVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NWCKSKKKAFTKY+KK+E+++GKKD Q QLEKMKKYCTVIR               KKAH
Sbjct: 121 NWCKSKKKAFTKYSKKFESEEGKKDTQVQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQVNGG VAQKVDFAY FFEKQ+PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA  ESHSA+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAGHESHSAIT 300

Query: 286 EFDRSVYLLSSLMG 299
           E+DR+   ++ + G
Sbjct: 301 EYDRTEKDITPIGG 314


>gi|224120106|ref|XP_002331138.1| predicted protein [Populus trichocarpa]
 gi|222872866|gb|EEF09997.1| predicted protein [Populus trichocarpa]
          Length = 389

 Score =  534 bits (1375), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 267/314 (85%), Positives = 284/314 (90%), Gaps = 15/314 (4%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRASRHRGK K+FPKDDP+KPCRLTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKAKSFPKDDPTKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTIIETPP+VVVGVVGYV TP GLRSL TVWAQHL+EEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVNTPGGLRSLSTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NWCKSKKKAFTKY KKYE++DGKKDIQAQLEK+KKYCTVIR               KKAH
Sbjct: 121 NWCKSKKKAFTKYCKKYESEDGKKDIQAQLEKLKKYCTVIRVLVHTQIRKMKGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQVNGG VA+KVDFAY FFEKQIPIDA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVAKKVDFAYSFFEKQIPIDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKKIYKLGK  QESH A+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKLGKCGQESHCAVT 300

Query: 286 EFDRSVYLLSSLMG 299
           E+DR+   ++ + G
Sbjct: 301 EYDRTEKDITPIGG 314


>gi|194693910|gb|ACF81039.1| unknown [Zea mays]
 gi|194702010|gb|ACF85089.1| unknown [Zea mays]
 gi|195606812|gb|ACG25236.1| 60S ribosomal protein L3 [Zea mays]
 gi|195619674|gb|ACG31667.1| 60S ribosomal protein L3 [Zea mays]
 gi|195626206|gb|ACG34933.1| 60S ribosomal protein L3 [Zea mays]
 gi|195641988|gb|ACG40462.1| 60S ribosomal protein L3 [Zea mays]
 gi|414587226|tpg|DAA37797.1| TPA: 60S ribosomal protein L3 isoform 1 [Zea mays]
 gi|414587227|tpg|DAA37798.1| TPA: 60S ribosomal protein L3 isoform 2 [Zea mays]
 gi|414587235|tpg|DAA37806.1| TPA: 60S ribosomal protein L3 isoform 1 [Zea mays]
 gi|414587236|tpg|DAA37807.1| TPA: 60S ribosomal protein L3 isoform 2 [Zea mays]
 gi|414588487|tpg|DAA39058.1| TPA: 60S ribosomal protein L3 isoform 1 [Zea mays]
 gi|414588488|tpg|DAA39059.1| TPA: 60S ribosomal protein L3 isoform 2 [Zea mays]
 gi|414588489|tpg|DAA39060.1| TPA: 60S ribosomal protein L3 isoform 3 [Zea mays]
 gi|414588495|tpg|DAA39066.1| TPA: 60S ribosomal protein L3 [Zea mays]
          Length = 389

 Score =  533 bits (1374), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 255/316 (80%), Positives = 279/316 (88%), Gaps = 16/316 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKR+SRHRGKVK+FP+DDP KPC LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPRDDPKKPCHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTIIETPPLV+VG+V YVKTPRGLR+L +VWAQHL+EEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NWCKSKKKAFTKY  KYE D GKK+IQ QLEKMKKY +VIR               KKAH
Sbjct: 121 NWCKSKKKAFTKYALKYENDAGKKEIQLQLEKMKKYASVIRVIAHTQIRKMKGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQVNGG++A KVD+ Y FFEK++P+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIADKVDYGYKFFEKEVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GKA QE+H A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKAGQETHDAST 300

Query: 286 EFDRSVYLLSSLMGSF 301
           EFDR+   ++  MG F
Sbjct: 301 EFDRTEKDITP-MGGF 315


>gi|414587228|tpg|DAA37799.1| TPA: hypothetical protein ZEAMMB73_342493 [Zea mays]
          Length = 307

 Score =  532 bits (1370), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 252/307 (82%), Positives = 274/307 (89%), Gaps = 15/307 (4%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKR+SRHRGKVK+FP+DDP KPC LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPRDDPKKPCHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTIIETPPLV+VG+V YVKTPRGLR+L +VWAQHL+EEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NWCKSKKKAFTKY  KYE D GKK+IQ QLEKMKKY +VIR               KKAH
Sbjct: 121 NWCKSKKKAFTKYALKYENDAGKKEIQLQLEKMKKYASVIRVIAHTQIRKMKGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQVNGG++A KVD+ Y FFEK++P+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIADKVDYGYKFFEKEVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GKA QE+H A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKAGQETHDAST 300

Query: 286 EFDRSVY 292
           EFDR  +
Sbjct: 301 EFDRYYF 307


>gi|356544202|ref|XP_003540543.1| PREDICTED: 60S ribosomal protein L3-like [Glycine max]
          Length = 389

 Score =  532 bits (1370), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 266/316 (84%), Positives = 289/316 (91%), Gaps = 16/316 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKD+PS+PCRLTAF+GYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDNPSQPCRLTAFVGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLR+L T+WAQHL+EEV+RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRTLNTIWAQHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NWCKSKKKAFTKY+KKYET++GKKDI++QLEK+KKY TVIR               KKAH
Sbjct: 121 NWCKSKKKAFTKYSKKYETEEGKKDIESQLEKLKKYATVIRVLAHTQIRKLKGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQVNGG+V QKVD+AY FFEKQIP+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTVDQKVDYAYSFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKKIYK+ KA QESHSA+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKVAKADQESHSAIT 300

Query: 286 EFDRSVYLLSSLMGSF 301
           EFDR+   ++  MG F
Sbjct: 301 EFDRTEKDITP-MGGF 315


>gi|118484565|gb|ABK94156.1| unknown [Populus trichocarpa]
          Length = 389

 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 266/314 (84%), Positives = 284/314 (90%), Gaps = 15/314 (4%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRASRHRGK K+FPKDDP+KPCRLTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKAKSFPKDDPTKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTIIETPP+VVVGVVGYV TP GLRSL TVWAQHL+EEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVNTPGGLRSLSTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NWCKSKKKAFTKY KKYE++DGKKDIQAQLEK+KKYCTVIR               KKAH
Sbjct: 121 NWCKSKKKAFTKYCKKYESEDGKKDIQAQLEKLKKYCTVIRVLAHTQIRKMKGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQVNGG VA+KVDFAY FFEKQIPIDA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVAKKVDFAYSFFEKQIPIDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE++KKIYKLGK  QESH A+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELSKKIYKLGKCGQESHCAVT 300

Query: 286 EFDRSVYLLSSLMG 299
           E+DR+   ++ + G
Sbjct: 301 EYDRTEKDITPIGG 314


>gi|212721340|ref|NP_001131208.1| uncharacterized protein LOC100192516 [Zea mays]
 gi|194690876|gb|ACF79522.1| unknown [Zea mays]
 gi|414866108|tpg|DAA44665.1| TPA: hypothetical protein ZEAMMB73_480377 [Zea mays]
 gi|414866109|tpg|DAA44666.1| TPA: hypothetical protein ZEAMMB73_480377 [Zea mays]
          Length = 389

 Score =  530 bits (1366), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 254/316 (80%), Positives = 278/316 (87%), Gaps = 16/316 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKR+SRHRGKVK+FP+DD  KPC LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPRDDAKKPCHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTIIETPPLV+VG+V YVKTPRGLR+L +VWAQHL+EEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NWCKSKKKAFTKY  KYE D GKK+IQ QLEKMKKY +VIR               KKAH
Sbjct: 121 NWCKSKKKAFTKYALKYENDAGKKEIQLQLEKMKKYASVIRVIAHTQIRKMKGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQVNGG++A KVD+ Y FFEK++P+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIADKVDYGYKFFEKEVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GKA QE+H A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKAGQETHDAST 300

Query: 286 EFDRSVYLLSSLMGSF 301
           EFDR+   ++  MG F
Sbjct: 301 EFDRTEKDITP-MGGF 315


>gi|125535904|gb|EAY82392.1| hypothetical protein OsI_37606 [Oryza sativa Indica Group]
          Length = 733

 Score =  530 bits (1365), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 252/316 (79%), Positives = 281/316 (88%), Gaps = 16/316 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKR+SRHRGKVK+FPKDD SKPC LT+F+GYKAGMTHIVR+V
Sbjct: 345 MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVSKPCHLTSFVGYKAGMTHIVREV 404

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTIIETPPLV+VG+V YVKTPRGLRSL +VWAQHL+EEVRRRFYK
Sbjct: 405 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYK 464

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NWCKSKKKAFTKY  KY++D GKK+IQ QLEKMKKY +++R               KKAH
Sbjct: 465 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASIVRVIAHTQIRKMKGLKQKKAH 524

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQ+NGG++A KVD+ Y FFEK+IP+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 525 LMEIQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 584

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GK+ QESH+A T
Sbjct: 585 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHAACT 644

Query: 286 EFDRSVYLLSSLMGSF 301
           EFDR+   ++  MG F
Sbjct: 645 EFDRTEKDITP-MGGF 659


>gi|115487526|ref|NP_001066250.1| Os12g0167900 [Oryza sativa Japonica Group]
 gi|548770|sp|P35684.2|RL3_ORYSJ RecName: Full=60S ribosomal protein L3
 gi|303853|dbj|BAA02155.1| ribosomal protein L3 [Oryza sativa Japonica Group]
 gi|77553113|gb|ABA95909.1| 60S ribosomal protein L3, putative, expressed [Oryza sativa
           Japonica Group]
 gi|113648757|dbj|BAF29269.1| Os12g0167900 [Oryza sativa Japonica Group]
 gi|125578626|gb|EAZ19772.1| hypothetical protein OsJ_35352 [Oryza sativa Japonica Group]
 gi|146141390|tpg|DAA01059.1| TPA_inf: ribosomal protein L3A [Oryza sativa (japonica
           cultivar-group)]
 gi|146141404|tpg|DAA01151.1| TPA_inf: ribosomal protein L3A [Oryza sativa (japonica
           cultivar-group)]
 gi|215686363|dbj|BAG87624.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|403081497|gb|AFR23065.1| hypothetical protein [Oryza sativa]
          Length = 389

 Score =  530 bits (1364), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 252/316 (79%), Positives = 281/316 (88%), Gaps = 16/316 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKR+SRHRGKVK+FPKDD SKPC LT+F+GYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVSKPCHLTSFVGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTIIETPPLV+VG+V YVKTPRGLRSL +VWAQHL+EEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NWCKSKKKAFTKY  KY++D GKK+IQ QLEKMKKY +++R               KKAH
Sbjct: 121 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASIVRVIAHTQIRKMKGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQ+NGG++A KVD+ Y FFEK+IP+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GK+ QESH+A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHAACT 300

Query: 286 EFDRSVYLLSSLMGSF 301
           EFDR+   ++  MG F
Sbjct: 301 EFDRTEKDITP-MGGF 315


>gi|255641019|gb|ACU20789.1| unknown [Glycine max]
          Length = 323

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 264/316 (83%), Positives = 288/316 (91%), Gaps = 16/316 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKD+PS+PCRLT F+GYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDNPSQPCRLTTFVGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLR+L T+WAQHL+EEV+RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRTLNTIWAQHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NWCKSKKKAFTKY+KKYET++GKKDI++QLEK+KKY TVIR               KKAH
Sbjct: 121 NWCKSKKKAFTKYSKKYETEEGKKDIESQLEKLKKYATVIRVLAHTQIRKLKGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQVNGG+V QKVD+AY FFEKQIP+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTVDQKVDYAYSFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NK+IYK+ KA QESHSA+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKRIYKVAKADQESHSAIT 300

Query: 286 EFDRSVYLLSSLMGSF 301
           EFDR+   ++  MG F
Sbjct: 301 EFDRTEKDITP-MGGF 315


>gi|115484365|ref|NP_001065844.1| Os11g0168200 [Oryza sativa Japonica Group]
 gi|62701923|gb|AAX92996.1| ribosomal protein L3, putative [Oryza sativa Japonica Group]
 gi|62734368|gb|AAX96477.1| ribosomal protein L3, putative [Oryza sativa Japonica Group]
 gi|77548788|gb|ABA91585.1| 60S ribosomal protein L3, putative, expressed [Oryza sativa
           Japonica Group]
 gi|113644548|dbj|BAF27689.1| Os11g0168200 [Oryza sativa Japonica Group]
 gi|125533541|gb|EAY80089.1| hypothetical protein OsI_35258 [Oryza sativa Indica Group]
 gi|125576343|gb|EAZ17565.1| hypothetical protein OsJ_33102 [Oryza sativa Japonica Group]
 gi|146141406|tpg|DAA01152.1| TPA_inf: ribosomal protein L3B [Oryza sativa (japonica
           cultivar-group)]
 gi|146141408|tpg|DAA01150.1| TPA_inf: ribosomal protein L3B [Oryza sativa]
 gi|215706975|dbj|BAG93435.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215715327|dbj|BAG95078.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 389

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 252/316 (79%), Positives = 281/316 (88%), Gaps = 16/316 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKR+SRHRGKVK+FPKDD +KPC LT+F+GYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVNKPCHLTSFVGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTIIETPP+VVVG+V YVKTPRGLRSL +VWAQHL+EEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPIVVVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NWCKSKKKAFTKY  KY++D GKK+IQ QLEKMKKY +V+R               KKAH
Sbjct: 121 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASVVRVIVHTQIRKMKGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQ+NGG++A KVD+ Y FFEK+IP+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GK+ QESH+A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHAACT 300

Query: 286 EFDRSVYLLSSLMGSF 301
           EFDR+   ++  MG F
Sbjct: 301 EFDRTEKDITP-MGGF 315


>gi|242077200|ref|XP_002448536.1| hypothetical protein SORBIDRAFT_06g028650 [Sorghum bicolor]
 gi|241939719|gb|EES12864.1| hypothetical protein SORBIDRAFT_06g028650 [Sorghum bicolor]
          Length = 389

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 254/316 (80%), Positives = 280/316 (88%), Gaps = 16/316 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKR+SRHRGKVK+FP+DDP KPC LTAF+GYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPRDDPKKPCHLTAFVGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTIIETPPLV+VG+V YVKTPRGLR+L +VWAQHL+EEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NWCKSKKKAFTKY  KY++D GKK+IQ QLEKMKKY +VIR               KKAH
Sbjct: 121 NWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYASVIRVIAHTQIKKMKGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQVNGG++A KVD+ Y FFEK++P+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIADKVDYGYKFFEKEVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GKA QESH A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKAGQESHDAST 300

Query: 286 EFDRSVYLLSSLMGSF 301
           EFDR+   ++  MG F
Sbjct: 301 EFDRTEKDITP-MGGF 315


>gi|357157422|ref|XP_003577793.1| PREDICTED: 60S ribosomal protein L3-like [Brachypodium distachyon]
          Length = 389

 Score =  527 bits (1357), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 251/316 (79%), Positives = 278/316 (87%), Gaps = 16/316 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKR SRHRGKVKAFP+DDP K C LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDPQKKCHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTI+ETPP+V+VG+V YVKTPRGLR+L +VWAQHL+E+VRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIVETPPIVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NWCKSKKKAFTKY  KY++D GKK+IQ QLEKMKKY +V+R               KKAH
Sbjct: 121 NWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYASVVRVIAHTQIRKMKGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQVNGG++A KVD+ Y FFEK++PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GKA QE+H A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKAGQETHDAST 300

Query: 286 EFDRSVYLLSSLMGSF 301
           EFDR+   ++  MG F
Sbjct: 301 EFDRTEKDITP-MGGF 315


>gi|15220533|ref|NP_176352.1| 60S ribosomal protein L3-2 [Arabidopsis thaliana]
 gi|21542436|sp|P22738.4|RL32_ARATH RecName: Full=60S ribosomal protein L3-2
 gi|4585874|gb|AAD25547.1|AC005850_4 60s ribosomal protein L3 [Arabidopsis thaliana]
 gi|28392966|gb|AAO41918.1| putative ribosomal protein [Arabidopsis thaliana]
 gi|28973595|gb|AAO64122.1| putative ribosomal protein [Arabidopsis thaliana]
 gi|332195738|gb|AEE33859.1| 60S ribosomal protein L3-2 [Arabidopsis thaliana]
          Length = 390

 Score =  526 bits (1355), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 259/316 (81%), Positives = 287/316 (90%), Gaps = 16/316 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDP+KPCRLT+FLGYKAGMTHIVRDV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCRLTSFLGYKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTIIETPP+VVVGVVGYVKTPRGLRSLCTVWAQHL+EE+RRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLCTVWAQHLSEELRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NW KSKKKAFT+Y+KK+ET++GKKDIQ+QLEKMKKYC+VIR               KKAH
Sbjct: 121 NWAKSKKKAFTRYSKKHETEEGKKDIQSQLEKMKKYCSVIRVLAHTQIRKMKGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           L EIQ+NGG +A+KVD+A   FEKQ+P+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LNEIQINGGDIAKKVDYACSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+Y++GK  QE+HSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMT 300

Query: 286 EFDRSVYLLSSLMGSF 301
           E+DR+   ++  MG F
Sbjct: 301 EYDRTEKDITP-MGGF 315


>gi|806279|gb|AAA66161.1| ribosomal protein [Arabidopsis thaliana]
          Length = 390

 Score =  526 bits (1355), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 259/316 (81%), Positives = 287/316 (90%), Gaps = 16/316 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDP+KPCRLT+FLGYKAGMTHIVRDV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCRLTSFLGYKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTIIETPP+VVVGVVGYVKTPRGLRSLCTVWAQHL+EE+RRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLCTVWAQHLSEELRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NW KSKKKAFT+Y+KK+ET++GKKDIQ+QLEKMKKYC+VIR               KKAH
Sbjct: 121 NWAKSKKKAFTRYSKKHETEEGKKDIQSQLEKMKKYCSVIRVLAHTQIRKMKGVKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           L EIQ+NGG +A+KVD+A   FEKQ+P+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LNEIQINGGDIAKKVDYACSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+Y++GK  QE+HSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMT 300

Query: 286 EFDRSVYLLSSLMGSF 301
           E+DR+   ++  MG F
Sbjct: 301 EYDRTEKDITP-MGGF 315


>gi|33526886|gb|AAQ21397.1| ribosomal protein L3 [Triticum aestivum]
 gi|33526907|gb|AAQ21398.1| ribosomal protein L3 [Triticum aestivum]
 gi|34105766|gb|AAQ62074.1| ribosomal protein L3 [Triticum aestivum]
 gi|118152391|gb|ABK63939.1| ribosomal protein L3-A2-I [Triticum aestivum]
 gi|118152394|gb|ABK63941.1| ribosomal protein L3-A2 [Triticum aestivum]
 gi|146141398|tpg|DAA01147.1| TPA_inf: ribosomal protein L3A-2 [Triticum aestivum]
          Length = 389

 Score =  526 bits (1355), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 250/316 (79%), Positives = 278/316 (87%), Gaps = 16/316 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKR SRHRGKVK+FPKDD  KPC LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTIIETPPLV+VG+V YVKTPRGLR+L +VWAQHL+E+VRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NWCKSKKKAFTKY  KY++D GKK+IQ QLEKMKKY T++R               KKAH
Sbjct: 121 NWCKSKKKAFTKYALKYDSDSGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQ+NGG++A KVD+ Y FFEK++P++AVFQKDEM+DIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQINGGTIADKVDYGYKFFEKEVPVEAVFQKDEMVDIIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKIYK+GK+ QESH A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKIYKMGKSGQESHEACT 300

Query: 286 EFDRSVYLLSSLMGSF 301
           EFDR+   ++  MG F
Sbjct: 301 EFDRTEKDITP-MGGF 315


>gi|315113296|pdb|3IZR|C Chain C, Localization Of The Large Subunit Ribosomal Proteins Into
           A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s
           Ribosome
 gi|33526877|gb|AAQ21396.1| ribosomal protein L3 [Triticum aestivum]
 gi|33526922|gb|AAQ21399.1| ribosomal protein L3 [Triticum aestivum]
 gi|34105776|gb|AAQ62079.1| ribosomal protein L3 [Triticum aestivum]
 gi|118152406|gb|ABK63947.1| ribosomal protein L3-A1 [Triticum aestivum]
 gi|146141402|tpg|DAA01149.1| TPA_inf: ribosomal protein L3A-1 [Triticum aestivum]
          Length = 389

 Score =  526 bits (1354), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 251/316 (79%), Positives = 278/316 (87%), Gaps = 16/316 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKR SRHRGKVK+FPKDD  KPC LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTIIETPPLV+VG+V YVKTPRGLR+L +VWAQHL+E+VRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NWCKSKKKAFTKY  KY++D GKK+IQ QLEKMKKY T++R               KKAH
Sbjct: 121 NWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQVNGG++A KVD+ Y FFEK++P++AVFQKDEM+DIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMVDIIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKIYK+GK+ QESH A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKIYKMGKSGQESHEACT 300

Query: 286 EFDRSVYLLSSLMGSF 301
           EFDR+   ++  MG F
Sbjct: 301 EFDRTEKDITP-MGGF 315


>gi|326497903|dbj|BAJ94814.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 389

 Score =  526 bits (1354), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 251/316 (79%), Positives = 278/316 (87%), Gaps = 16/316 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKR SRHRGKVK+FPKDD  KPC LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTIIETPPLV+VG+V YVKTPRGLR+L +VWAQHL+E+VRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NWCKSKKKAFTKY  KY++D GKK+IQ QLEKMKKY T++R               KKAH
Sbjct: 121 NWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQVNGG++A KVD+ Y FFEK++P++AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GK+ QESH A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACT 300

Query: 286 EFDRSVYLLSSLMGSF 301
           EFDR+   ++  MG F
Sbjct: 301 EFDRTEKDITP-MGGF 315


>gi|297837293|ref|XP_002886528.1| ARP2/RPL3B [Arabidopsis lyrata subsp. lyrata]
 gi|297332369|gb|EFH62787.1| ARP2/RPL3B [Arabidopsis lyrata subsp. lyrata]
          Length = 390

 Score =  526 bits (1354), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 260/316 (82%), Positives = 286/316 (90%), Gaps = 16/316 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDP+KPCRLT+FLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDPTKPCRLTSFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTIIETPP+VVVGVVGYVKTPRGLRSL TVWAQHL+EEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLSTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NW KSKKKAFTKY+KK+ETD+GKKDIQ+QLEKMKKYCTVIR               KKAH
Sbjct: 121 NWAKSKKKAFTKYSKKHETDEGKKDIQSQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           L EIQ+NGG +A+KVD+A   FEKQ+P+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LNEIQINGGDIAKKVDYACSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+Y++GK  QE+HSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMT 300

Query: 286 EFDRSVYLLSSLMGSF 301
           E+DR+   ++  MG F
Sbjct: 301 EYDRTEKDITP-MGGF 315


>gi|34105768|gb|AAQ62075.1| ribosomal protein L3 [Triticum aestivum]
 gi|34105770|gb|AAQ62076.1| ribosomal protein L3 [Triticum aestivum]
 gi|34105774|gb|AAQ62078.1| ribosomal protein L3 [Triticum aestivum]
 gi|118152389|gb|ABK63938.1| ribosomal protein L3-B3 [Triticum aestivum]
 gi|118152400|gb|ABK63944.1| ribosomal protein L3-B1 [Triticum aestivum]
 gi|146141392|tpg|DAA01144.1| TPA_inf: ribosomal protein L3B-3 [Triticum aestivum]
 gi|146141396|tpg|DAA01146.1| TPA_inf: ribosomal protein L3B-1 [Triticum aestivum]
          Length = 389

 Score =  525 bits (1353), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 250/316 (79%), Positives = 277/316 (87%), Gaps = 16/316 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKR SRHRGKVKAFP+DD SK C LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTI+ETPP+V+VG+V YVKTPRGLR+L +VWAQHL+E+VRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIVETPPIVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NWCKSKKKAFTKY  KY++D GKK+IQ QLEKMKKY TV+R               KKAH
Sbjct: 121 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQ+NGG++A KVD+ Y FFEK++PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GK  QE+H A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDAST 300

Query: 286 EFDRSVYLLSSLMGSF 301
           EFDR+   ++  MG F
Sbjct: 301 EFDRTEKDITP-MGGF 315


>gi|118152392|gb|ABK63940.1| ribosomal protein L3-A2-II [Triticum aestivum]
          Length = 401

 Score =  525 bits (1352), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 250/316 (79%), Positives = 278/316 (87%), Gaps = 16/316 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKR SRHRGKVK+FPKDD  KPC LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTIIETPPLV+VG+V YVKTPRGLR+L +VWAQHL+E+VRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NWCKSKKKAFTKY  KY++D GKK+IQ QLEKMKKY T++R               KKAH
Sbjct: 121 NWCKSKKKAFTKYALKYDSDSGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQ+NGG++A KVD+ Y FFEK++P++AVFQKDEM+DIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQINGGTIADKVDYGYKFFEKEVPVEAVFQKDEMVDIIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKIYK+GK+ QESH A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKIYKMGKSGQESHEACT 300

Query: 286 EFDRSVYLLSSLMGSF 301
           EFDR+   ++  MG F
Sbjct: 301 EFDRTEKDITP-MGGF 315


>gi|356531559|ref|XP_003534345.1| PREDICTED: 60S ribosomal protein L3-like [Glycine max]
          Length = 389

 Score =  524 bits (1349), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 263/316 (83%), Positives = 286/316 (90%), Gaps = 16/316 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKD+PS+PC LTAF+GYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDNPSQPCGLTAFVGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLR+L TVWAQHL+EEV+RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRTLNTVWAQHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NWCKSKKKAFTKY+KKYET++GKKDI++QLEK+KKY TVIR               KKAH
Sbjct: 121 NWCKSKKKAFTKYSKKYETEEGKKDIESQLEKLKKYATVIRVLAHTQIRKLKGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQVNGG+V QKVD+AY FFEKQIP+DAVF KDEMIDI+GVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTVDQKVDYAYSFFEKQIPVDAVFHKDEMIDIVGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKKIYK+ KA  ESHSA+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKVAKADHESHSAIT 300

Query: 286 EFDRSVYLLSSLMGSF 301
           EFDR+   ++  MG F
Sbjct: 301 EFDRTEKDITP-MGGF 315


>gi|449435140|ref|XP_004135353.1| PREDICTED: 60S ribosomal protein L3-like [Cucumis sativus]
 gi|449503293|ref|XP_004161930.1| PREDICTED: 60S ribosomal protein L3-like [Cucumis sativus]
          Length = 388

 Score =  523 bits (1347), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 255/314 (81%), Positives = 281/314 (89%), Gaps = 15/314 (4%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFP+DD SKPCRLTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDSSKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTIIE PP+VVVGVVGY++TPRGLRS  TVWAQHL+EEV+RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIEAPPMVVVGVVGYIRTPRGLRSFKTVWAQHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NWC SKKKAFTKY+KKYET+DGKKDIQ+QL+ ++K+ TVIR               KKAH
Sbjct: 121 NWCMSKKKAFTKYSKKYETEDGKKDIQSQLDSLRKHSTVIRVLAHSQIRKMQGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQVNGG V +KVD+AY  FEKQ+P+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVPKKVDYAYSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YK+GK  Q+SHSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKIGKTGQDSHSAMT 300

Query: 286 EFDRSVYLLSSLMG 299
           EFDR+   ++ + G
Sbjct: 301 EFDRTEKDITPIGG 314


>gi|118152396|gb|ABK63942.1| ribosomal protein L3-A3 [Triticum aestivum]
 gi|118152398|gb|ABK63943.1| ribosomal protein L3-A3 [Triticum aestivum]
 gi|146141400|tpg|DAA01148.1| TPA_inf: ribosomal protein L3A-3 [Triticum aestivum]
          Length = 389

 Score =  522 bits (1344), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 250/316 (79%), Positives = 276/316 (87%), Gaps = 16/316 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKR SRHRGKVKAFPKDD  KPC LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPKDDQQKPCHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTIIETPPLV+VG+V YVKTP GLR+L +VWAQHL+E+VRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPCGLRTLNSVWAQHLSEDVRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NWCKSKKKAFTKY  KY+ D GKK+IQ QLEKMKKY T++R               KKAH
Sbjct: 121 NWCKSKKKAFTKYALKYDCDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQ+NGG++A KVD+ Y FFEK++P++AVFQKDEM+DIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQINGGTIADKVDYGYKFFEKEVPVEAVFQKDEMVDIIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKIYK+GK+ QESH A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKIYKMGKSGQESHEACT 300

Query: 286 EFDRSVYLLSSLMGSF 301
           EFDR+   ++  MG F
Sbjct: 301 EFDRTEKDITP-MGGF 315


>gi|118152402|gb|ABK63945.1| ribosomal protein L3-B2 [Triticum aestivum]
 gi|118152404|gb|ABK63946.1| ribosomal protein L3-B2 [Triticum aestivum]
 gi|146141394|tpg|DAA01145.1| TPA_inf: ribosomal protein L3B-2 [Triticum aestivum]
          Length = 389

 Score =  521 bits (1343), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 248/316 (78%), Positives = 276/316 (87%), Gaps = 16/316 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKR SRHRGKVKAFP+DD SK C LTAFLGYK+GMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKSGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTI+ETPP+V+VG+V YVKTPRGLR+L +VWAQHL+E+VRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIVETPPIVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NWCKSKKKAFTKY  KY++D GKK+I  QLEKMKKY TV+R               KKAH
Sbjct: 121 NWCKSKKKAFTKYALKYDSDAGKKEIHMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQ+NGG++A KVD+ Y FFEK++PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQINGGTIADKVDYGYSFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GK  QE+H A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDAST 300

Query: 286 EFDRSVYLLSSLMGSF 301
           EFDR+   ++  MG F
Sbjct: 301 EFDRTEKDITP-MGGF 315


>gi|6688812|emb|CAB65281.1| L3 Ribosomal protein [Medicago sativa subsp. x varia]
          Length = 388

 Score =  520 bits (1340), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 258/316 (81%), Positives = 284/316 (89%), Gaps = 16/316 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDP+KP +LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPTKPPKLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCE VTIIETPP+VVVGVVGYVKTPRGLR+L TVW QHL+EE++RRFYK
Sbjct: 61  EKPGSKLHKKETCEPVTIIETPPMVVVGVVGYVKTPRGLRTLNTVWTQHLSEEIKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NWCKSKKKAF+KY+K+YE+D+GKK+IQ QLEK+KKY TVIR               KKAH
Sbjct: 121 NWCKSKKKAFSKYSKQYESDEGKKNIQTQLEKLKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           +MEIQVNGG++AQKVDFAY FFEKQ+PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 IMEIQVNGGTIAQKVDFAYNFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKKIYKLGK  +E+H A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKLGKVGEETHDAQT 300

Query: 286 EFDRSVYLLSSLMGSF 301
           EFDR+   ++  MG F
Sbjct: 301 EFDRTEKDITP-MGGF 315


>gi|357443613|ref|XP_003592084.1| L3 Ribosomal protein [Medicago truncatula]
 gi|355481132|gb|AES62335.1| L3 Ribosomal protein [Medicago truncatula]
          Length = 455

 Score =  520 bits (1339), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 258/316 (81%), Positives = 284/316 (89%), Gaps = 16/316 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDP+KP +LTAFLGYKAGMTHIVR+V
Sbjct: 67  MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPTKPPKLTAFLGYKAGMTHIVREV 126

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCE VTIIETPP+VVVGVVGYVKTPRGLR+L TVW QHL+EE++RRFYK
Sbjct: 127 EKPGSKLHKKETCEPVTIIETPPMVVVGVVGYVKTPRGLRTLNTVWTQHLSEEIKRRFYK 186

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NWCKSKKKAF+KY+K+YE+D+GKK+IQ QLEK+KKY TVIR               KKAH
Sbjct: 187 NWCKSKKKAFSKYSKQYESDEGKKNIQTQLEKLKKYATVIRVLAHTQIRKMKGLKQKKAH 246

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           +MEIQVNGG++AQKVDFAY FFEKQ+PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 247 IMEIQVNGGTIAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 306

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKKIYKLGK  +E+H A T
Sbjct: 307 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKLGKVGEETHDAQT 366

Query: 286 EFDRSVYLLSSLMGSF 301
           EFDR+   ++  MG F
Sbjct: 367 EFDRTEKDITP-MGGF 381


>gi|312283375|dbj|BAJ34553.1| unnamed protein product [Thellungiella halophila]
          Length = 389

 Score =  518 bits (1334), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 256/317 (80%), Positives = 282/317 (88%), Gaps = 16/317 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDD +KPC+ TAF+GYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTIIETP +VVVGVV YVKTPRGLRSL TVWAQHL+EEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NW KSKKKAFT Y K+YE++DGKK I AQLEKMKKY TVIR               KKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYESEDGKKSIHAQLEKMKKYGTVIRVLAHTQIRKMKGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           +MEIQ+NGG++AQKVDFAY FFEKQIPID+VFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIDSVFQKDEMIDVIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKKIY+LGK  QE+H+AMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGQETHTAMT 300

Query: 286 EFDRSVYLLSSLMGSFS 302
           E+DR+   ++  MG F+
Sbjct: 301 EYDRTEKDVTP-MGGFA 316


>gi|110740330|dbj|BAF02060.1| hypothetical protein [Arabidopsis thaliana]
          Length = 555

 Score =  516 bits (1330), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 253/305 (82%), Positives = 276/305 (90%), Gaps = 15/305 (4%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDD +KPC+ TAF+GYKAGMTHIVR+V
Sbjct: 167 MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 226

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTIIETP +VVVGVV YVKTPRGLRSL TVWAQHL+EEVRRRFYK
Sbjct: 227 EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 286

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NW KSKKKAFT Y K+Y+++DGKK IQAQLEKMKKY TVIR               KKAH
Sbjct: 287 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 346

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           +MEIQ+NGG++AQKVDFAY FFEKQIPI+AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 347 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 406

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKKIY+LGK   E+H+AMT
Sbjct: 407 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 466

Query: 286 EFDRS 290
           E+DR+
Sbjct: 467 EYDRT 471


>gi|297846744|ref|XP_002891253.1| hypothetical protein ARALYDRAFT_473757 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297337095|gb|EFH67512.1| hypothetical protein ARALYDRAFT_473757 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 389

 Score =  516 bits (1330), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 258/316 (81%), Positives = 281/316 (88%), Gaps = 16/316 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDD +KPC+ TAF+GYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTIIETP +VVVGVV YVKTPRGLRSL TVWAQHL+EEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NW KSKKKAFT Y K+YET++GKK IQAQLEKMKKY TVIR               KKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYETEEGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           +MEIQ+NGG++AQKVDFAY FFEKQIPI+AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKKIY+LGK   E+HSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHSAMT 300

Query: 286 EFDRSVYLLSSLMGSF 301
           E+DR+   ++  MG F
Sbjct: 301 EYDRTEKDVTP-MGGF 315


>gi|15218306|ref|NP_175009.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
 gi|42571751|ref|NP_973966.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
 gi|79319275|ref|NP_001031146.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
 gi|334183068|ref|NP_001185148.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
 gi|334183070|ref|NP_001185149.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
 gi|334183072|ref|NP_001185150.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
 gi|334183074|ref|NP_001185151.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
 gi|334183076|ref|NP_001185152.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
 gi|27735225|sp|P17094.5|RL31_ARATH RecName: Full=60S ribosomal protein L3-1; AltName: Full=Protein
           EMBRYO DEFECTIVE 2207
 gi|11935191|gb|AAG42011.1|AF327421_1 putative ribosomal protein [Arabidopsis thaliana]
 gi|13487800|gb|AAK27726.1|AF361101_1 putative ribosomal protein [Arabidopsis thaliana]
 gi|13605657|gb|AAK32822.1|AF361809_1 At1g43170/F1I21_18 [Arabidopsis thaliana]
 gi|3617741|gb|AAC36018.1| L3 cytoplasmic ribosomal protein [Arabidopsis thaliana]
 gi|14517418|gb|AAK62599.1| At1g43170/F1I21_18 [Arabidopsis thaliana]
 gi|15450559|gb|AAK96457.1| At1g43170/F1I21_18 [Arabidopsis thaliana]
 gi|15982761|gb|AAL09721.1| At1g43170/F1I21_18 [Arabidopsis thaliana]
 gi|332193830|gb|AEE31951.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
 gi|332193831|gb|AEE31952.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
 gi|332193832|gb|AEE31953.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
 gi|332193834|gb|AEE31955.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
 gi|332193835|gb|AEE31956.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
 gi|332193836|gb|AEE31957.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
 gi|332193837|gb|AEE31958.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
 gi|332193838|gb|AEE31959.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
          Length = 389

 Score =  514 bits (1324), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 256/316 (81%), Positives = 281/316 (88%), Gaps = 16/316 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDD +KPC+ TAF+GYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTIIETP +VVVGVV YVKTPRGLRSL TVWAQHL+EEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NW KSKKKAFT Y K+Y+++DGKK IQAQLEKMKKY TVIR               KKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           +MEIQ+NGG++AQKVDFAY FFEKQIPI+AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKKIY+LGK   E+H+AMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300

Query: 286 EFDRSVYLLSSLMGSF 301
           E+DR+   ++  MG F
Sbjct: 301 EYDRTEKDVTP-MGGF 315


>gi|166858|gb|AAA66160.1| ribosomal protein [Arabidopsis thaliana]
          Length = 389

 Score =  513 bits (1322), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 255/316 (80%), Positives = 281/316 (88%), Gaps = 16/316 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDD +KPC+ TAF+GYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTIIETP +VVVGVV YVKTPRGLRSL TVWAQHL+EEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NW KSKKKAFT Y K+Y+++DGKK IQAQLEK+KKY TVIR               KKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKVKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           +MEIQ+NGG++AQKVDFAY FFEKQIPI+AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKKIY+LGK   E+H+AMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300

Query: 286 EFDRSVYLLSSLMGSF 301
           E+DR+   ++  MG F
Sbjct: 301 EYDRTEKDVTP-MGGF 315


>gi|23397228|gb|AAN31896.1| putative ribosomal protein [Arabidopsis thaliana]
          Length = 389

 Score =  513 bits (1320), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 255/316 (80%), Positives = 280/316 (88%), Gaps = 16/316 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDD +KPC+ TAF+GYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTIIETP +VVVGVV YVKTPRGLRSL TVWAQH +EEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHFSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NW KSKKKAFT Y K+Y+++DGKK IQAQLEKMKKY TVIR               KKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           +MEIQ+NGG++AQKVDFAY FFEKQIPI+AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKKIY+LGK   E+H+AMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300

Query: 286 EFDRSVYLLSSLMGSF 301
           E+DR+   ++  MG F
Sbjct: 301 EYDRTEKDVTP-MGGF 315


>gi|302788822|ref|XP_002976180.1| hypothetical protein SELMODRAFT_267945 [Selaginella moellendorffii]
 gi|300156456|gb|EFJ23085.1| hypothetical protein SELMODRAFT_267945 [Selaginella moellendorffii]
          Length = 389

 Score =  509 bits (1312), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 245/317 (77%), Positives = 276/317 (87%), Gaps = 16/317 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRA RHRGKVK+FP+DDP+K   LTAF+GYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAQRHRGKVKSFPRDDPTKKPHLTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTIIETPPL++VGVV Y+KTPRGLRSL TVWAQHL+++++RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPLIIVGVVAYIKTPRGLRSLNTVWAQHLSDDLKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           N+ KSKKKAFTKY KKY+TD+GKK I+ +LE+MKKY +VIR               KKAH
Sbjct: 121 NFYKSKKKAFTKYAKKYDTDEGKKGIEHELERMKKYGSVIRVLAHTKVRNLKGIKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQVNGG+ A+KVDFAY FFEK +PID+VF+KDEMID+IGVTKG GYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTTAEKVDFAYNFFEKAVPIDSVFRKDEMIDVIGVTKGHGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYK+GK  QESH A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKQGQESHKAST 300

Query: 286 EFDRSVYLLSSLMGSFS 302
           EFD +   ++  MG F+
Sbjct: 301 EFDTTDKDITP-MGGFA 316


>gi|34105772|gb|AAQ62077.1| ribosomal protein L3 [Triticum aestivum]
          Length = 384

 Score =  509 bits (1311), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 245/316 (77%), Positives = 272/316 (86%), Gaps = 21/316 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKR SRHRGKVKAFP+DD SK C LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           E     LHKKETCEAVTI+ETPP+V+VG+V YVKTPRGLR+L +VWAQHL+E+VRRRFYK
Sbjct: 61  E-----LHKKETCEAVTIVETPPIVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 115

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NWCKSKKKAFTKY  KY++D GKK+IQ QLEKMKKY TV+R               KKAH
Sbjct: 116 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAH 175

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQ+NGG++A KVD+ Y FFEK++PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 176 LMEIQINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 235

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GK  QE+H A T
Sbjct: 236 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDAST 295

Query: 286 EFDRSVYLLSSLMGSF 301
           EFDR+   ++  MG F
Sbjct: 296 EFDRTEKDITP-MGGF 310


>gi|302769558|ref|XP_002968198.1| hypothetical protein SELMODRAFT_270706 [Selaginella moellendorffii]
 gi|300163842|gb|EFJ30452.1| hypothetical protein SELMODRAFT_270706 [Selaginella moellendorffii]
          Length = 389

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 244/317 (76%), Positives = 276/317 (87%), Gaps = 16/317 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRA RHRGKVK+FP+DDP+K   LTAF+GYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAQRHRGKVKSFPRDDPTKKPHLTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTIIETPPL++VGVV Y+KTPRGLRSL TVWAQHL+++++RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPLIIVGVVAYIKTPRGLRSLNTVWAQHLSDDLKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           N+ KSKKKAFTKY KKY+TD+GKK I+ +LE+MKKY +VIR               KKAH
Sbjct: 121 NFYKSKKKAFTKYAKKYDTDEGKKGIEHELERMKKYGSVIRVLAHTKVRNLKGIKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQVNGG+ A+KVDFAY FFEK +PID+VF+KDEMID+IGVTKG GYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTTAEKVDFAYNFFEKAVPIDSVFRKDEMIDVIGVTKGHGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYK+GK  Q+SH A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKQGQDSHKAST 300

Query: 286 EFDRSVYLLSSLMGSFS 302
           EFD +   ++  MG F+
Sbjct: 301 EFDTTDKDITP-MGGFA 316


>gi|37909690|gb|AAP23996.1| ribosomal protein L3B [Oryza sativa Indica Group]
          Length = 345

 Score =  503 bits (1295), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 241/305 (79%), Positives = 270/305 (88%), Gaps = 16/305 (5%)

Query: 12  GSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKE 71
           GSLGFLPRKR+SRHRGKVK+FPKDD +KPC LT+F+GYKAGMTHIVR+VEKPGSKLHKKE
Sbjct: 1   GSLGFLPRKRSSRHRGKVKSFPKDDVNKPCHLTSFVGYKAGMTHIVREVEKPGSKLHKKE 60

Query: 72  TCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFT 131
           TCEAVTIIETPP+VVVG+V YVKTPRGLRSL +VWAQHL+EEVRRRFYKNWCKSKKKAFT
Sbjct: 61  TCEAVTIIETPPIVVVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYKNWCKSKKKAFT 120

Query: 132 KYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAHLMEIQVNGGSV 176
           KY  KY++D GKK+IQ QLEKMKKY +V+R               KKAHLMEIQ+NGG++
Sbjct: 121 KYALKYDSDAGKKEIQMQLEKMKKYASVVRVIVHTQIRKMKGLKQKKAHLMEIQINGGTI 180

Query: 177 AQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRK 236
           A KVD+ Y FFEK+IP+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRK
Sbjct: 181 ADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRK 240

Query: 237 VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRSVYLLSS 296
           VACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GK+ QESH+A TEFDR+   ++ 
Sbjct: 241 VACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHAACTEFDRTEKDITP 300

Query: 297 LMGSF 301
            MG F
Sbjct: 301 -MGGF 304


>gi|168060915|ref|XP_001782438.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162666109|gb|EDQ52773.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 392

 Score =  502 bits (1292), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 240/318 (75%), Positives = 275/318 (86%), Gaps = 17/318 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRASR RGKVK FPKDDP K   LT+FLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRSRGKVKTFPKDDPVKKPHLTSFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTI+ETPP++VVG+V Y+KTPRGLRSL TVWAQHL++EV+RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIVETPPIIVVGLVAYIKTPRGLRSLNTVWAQHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NW KSKKKAF+KY+K+YE+++GK+D+Q++LE+MKKY +VIR               KKAH
Sbjct: 121 NWYKSKKKAFSKYSKRYESEEGKRDLQSELERMKKYASVIRVLAHTQVRKLKGIKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           L EIQVNGG++A+KVDF Y  FEK +P+DAVF KDEMIDIIGVT+G GYEGVVTRWGVTR
Sbjct: 181 LAEIQVNGGTIAEKVDFGYNLFEKPVPVDAVFNKDEMIDIIGVTRGHGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK-ASQESHSAM 284
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YK+GK A +ES SA 
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKSADKESFSAS 300

Query: 285 TEFDRSVYLLSSLMGSFS 302
           TEFD +   ++  MG F+
Sbjct: 301 TEFDVTEKEITP-MGGFA 317


>gi|168040500|ref|XP_001772732.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|168040502|ref|XP_001772733.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162675957|gb|EDQ62446.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162675958|gb|EDQ62447.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 392

 Score =  496 bits (1276), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 238/318 (74%), Positives = 275/318 (86%), Gaps = 17/318 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRA+R RGKVK FPKD  SK   LT+FLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARSRGKVKTFPKDVASKEPHLTSFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTI+ETPP+VVVG+V Y+KTPRGLRSL TVWAQHL++EV+RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIVETPPMVVVGLVAYIKTPRGLRSLNTVWAQHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NW KSKKKAF+KY+K+YE+++GKKD++++LE+MKKY +VIR               KKAH
Sbjct: 121 NWYKSKKKAFSKYSKRYESEEGKKDVESELERMKKYASVIRVLAHTQVRKLKGIKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           L EIQVNGGS+A KVDF Y  FEK++P+D+VF+KDEMIDIIGVT+G GYEGVVTRWGVTR
Sbjct: 181 LAEIQVNGGSIAAKVDFGYKLFEKEVPVDSVFRKDEMIDIIGVTRGHGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK-ASQESHSAM 284
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YK+GK A ++S SA 
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKVADKQSFSAS 300

Query: 285 TEFDRSVYLLSSLMGSFS 302
           TEFD +   ++  MG F+
Sbjct: 301 TEFDVTEKEITP-MGGFA 317


>gi|168026163|ref|XP_001765602.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683240|gb|EDQ69652.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 392

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 234/318 (73%), Positives = 273/318 (85%), Gaps = 17/318 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRA+R RGKVK FPKDD SK   LT+FLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARSRGKVKTFPKDDASKAPHLTSFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTI+ETPP++VVG+V Y+KTPRGLRSL TVWAQHL++EV+RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIVETPPMIVVGLVAYIKTPRGLRSLNTVWAQHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NW KSKKKAF+ Y+K+YE+++GKKD++++LE+MKKY +VIR               KKAH
Sbjct: 121 NWSKSKKKAFSNYSKRYESEEGKKDVESELERMKKYASVIRVLAHTQVRKLKGIKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           L EIQVNGG++A+KVDF +  FEK + +DAVF+KDEMIDIIGVT+G GYEGVVTRWGVTR
Sbjct: 181 LAEIQVNGGNIAEKVDFGFKLFEKWVSVDAVFRKDEMIDIIGVTRGHGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA-SQESHSAM 284
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YK+GKA  ++S  A 
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKAEDKQSFGAS 300

Query: 285 TEFDRSVYLLSSLMGSFS 302
           TEFD +   ++  MG F+
Sbjct: 301 TEFDVTEKEITP-MGGFA 317


>gi|297795267|ref|XP_002865518.1| hypothetical protein ARALYDRAFT_917513 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297311353|gb|EFH41777.1| hypothetical protein ARALYDRAFT_917513 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 375

 Score =  479 bits (1234), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 243/317 (76%), Positives = 268/317 (84%), Gaps = 30/317 (9%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDD +KPC+ TAF+GYKAGMTHIVRDV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTIIETP +VVVGVV YVKT RGLRSL TVWAQHL+EEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTLRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NW KSKKKAFT Y K+YE+DDG+K IQAQLEKMKKY T+IR               KKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYESDDGRKGIQAQLEKMKKYGTIIRVLAHTQIRKMKGLTQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           +MEIQ+NGG++              IPIDAVFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTI--------------IPIDAVFQKDEMIDVIGVTKGKGYEGVVTRWGVTR 226

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLR+VACIGAWHPARVS+TVARAGQNGYHHRTE+NKKIY+LGK   E+HSAMT
Sbjct: 227 LPRKTHRGLREVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTETHSAMT 286

Query: 286 EFDRSVYLLSSLMGSFS 302
           E+DR+   ++  MG F+
Sbjct: 287 EYDRTEKEITP-MGGFA 302


>gi|357155087|ref|XP_003577004.1| PREDICTED: cytochrome P450 89A2-like [Brachypodium distachyon]
          Length = 836

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 228/296 (77%), Positives = 256/296 (86%), Gaps = 16/296 (5%)

Query: 21  RASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIE 80
           R SRHRGKVKAFP+DD  K C LTAFLGYKAGMTHIVR+VEKPGSKLHKKETCEAVTIIE
Sbjct: 468 RCSRHRGKVKAFPRDDQQKSCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETCEAVTIIE 527

Query: 81  TPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETD 140
           TPP+V+VG+V YVKTPRGLR+L +VWAQHL+E+VRRRFYKNWCKSKKKAFTKY  KY+TD
Sbjct: 528 TPPIVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKKAFTKYALKYDTD 587

Query: 141 DGKKDIQAQLEKMKKYCTVIR---------------KKAHLMEIQVNGGSVAQKVDFAYG 185
            GKK+IQ QLEKMKKY +V+R               KKAHLMEIQ+NGG++A KVD+ Y 
Sbjct: 588 AGKKEIQLQLEKMKKYASVVRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYK 647

Query: 186 FFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHP 245
           FFEK++P++AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHP
Sbjct: 648 FFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHP 707

Query: 246 ARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRSVYLLSSLMGSF 301
           ARVS+TVARAGQNGYHHRTEMNKK+YK+GK  QE+H A TEFDR+   ++  MG F
Sbjct: 708 ARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITP-MGGF 762


>gi|414587224|tpg|DAA37795.1| TPA: hypothetical protein ZEAMMB73_342493 [Zea mays]
          Length = 429

 Score =  477 bits (1228), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 230/298 (77%), Positives = 255/298 (85%), Gaps = 16/298 (5%)

Query: 19  RKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTI 78
           R  +S  RG  ++FP+DDP KPC LTAFLGYKAGMTHIVR+VEKPGSKLHKKETCEAVTI
Sbjct: 59  RTVSSSTRGTAQSFPRDDPKKPCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETCEAVTI 118

Query: 79  IETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYE 138
           IETPPLV+VG+V YVKTPRGLR+L +VWAQHL+EEVRRRFYKNWCKSKKKAFTKY  KYE
Sbjct: 119 IETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEEVRRRFYKNWCKSKKKAFTKYALKYE 178

Query: 139 TDDGKKDIQAQLEKMKKYCTVIR---------------KKAHLMEIQVNGGSVAQKVDFA 183
            D GKK+IQ QLEKMKKY +VIR               KKAHLMEIQVNGG++A KVD+ 
Sbjct: 179 NDAGKKEIQLQLEKMKKYASVIRVIAHTQIRKMKGLKQKKAHLMEIQVNGGTIADKVDYG 238

Query: 184 YGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAW 243
           Y FFEK++P+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAW
Sbjct: 239 YKFFEKEVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAW 298

Query: 244 HPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRSVYLLSSLMGSF 301
           HPARVS+TVARAGQNGYHHRTEMNKK+YK+GKA QE+H A TEFDR+   ++  MG F
Sbjct: 299 HPARVSYTVARAGQNGYHHRTEMNKKVYKIGKAGQETHDASTEFDRTEKDITP-MGGF 355


>gi|358346097|ref|XP_003637108.1| hypothetical protein MTR_072s1001, partial [Medicago truncatula]
 gi|355503043|gb|AES84246.1| hypothetical protein MTR_072s1001, partial [Medicago truncatula]
          Length = 349

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 237/287 (82%), Positives = 258/287 (89%), Gaps = 16/287 (5%)

Query: 30  KAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGV 89
           KAFPKDDP+KPCRLTAF+GYK+GMTHIVR+VEKPGSKLHKKETCEAVTIIETPP+VVVGV
Sbjct: 1   KAFPKDDPTKPCRLTAFVGYKSGMTHIVREVEKPGSKLHKKETCEAVTIIETPPIVVVGV 60

Query: 90  VGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQ 149
           VGYVKTPRGLR+L TVWAQHL+E+V+RRFYKNW KSKKKAFTKYTKKYETD+GKKDIQ Q
Sbjct: 61  VGYVKTPRGLRTLNTVWAQHLSEDVKRRFYKNWAKSKKKAFTKYTKKYETDEGKKDIQTQ 120

Query: 150 LEKMKKYCTVIR---------------KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPID 194
           LEK+KKY TVIR               KKAHLMEIQVNGG+V QKVD+AY FFEKQIP+D
Sbjct: 121 LEKLKKYATVIRVLAHTQVRKLKGLKQKKAHLMEIQVNGGTVNQKVDYAYNFFEKQIPVD 180

Query: 195 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVAR 254
           AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVAR
Sbjct: 181 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVAR 240

Query: 255 AGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRSVYLLSSLMGSF 301
           AGQNGYHHRTE+NKKIYK+GK  QESH+A+TEFDR+   ++  MG F
Sbjct: 241 AGQNGYHHRTELNKKIYKVGKQDQESHTAITEFDRTEKDITP-MGGF 286


>gi|159489312|ref|XP_001702641.1| ribosomal protein L3, component of cytosolic 80S ribosome and 60S
           large subunit [Chlamydomonas reinhardtii]
 gi|158280663|gb|EDP06420.1| ribosomal protein L3 [Chlamydomonas reinhardtii]
          Length = 386

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 229/315 (72%), Positives = 256/315 (81%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPR GSLGF PRKR  R +GKVK+FP+DD SKP  LTAF+GYKAGMTHIVRDV
Sbjct: 1   MSHRKFEHPRSGSLGFSPRKRCRRGKGKVKSFPRDDASKPVHLTAFMGYKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCE VTIIE PP+VVVG VGYVKTPRGLRSL TVWA+HL+EEV+RRFYK
Sbjct: 61  EKPGSKLHKKETCEPVTIIECPPMVVVGAVGYVKTPRGLRSLNTVWAEHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KKY   DGKK I+A+L  +KK+C VIR              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKKY--SDGKKAIEAELAALKKHCCVIRVLAHTQVKKLGFGVKKAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           ME+QVNGG+VAQKVDFAY  FEKQ+ +DAVFQ +EMID I +TKG G +GVV RWGVTRL
Sbjct: 179 MEVQVNGGTVAQKVDFAYSMFEKQVSVDAVFQPNEMIDTIAITKGHGVQGVVQRWGVTRL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPARV +TVARAGQ G+HHRTE+NKK+YK+GK    SH A TE
Sbjct: 239 PRKTHRGLRKVACIGAWHPARVKWTVARAGQQGFHHRTEINKKVYKIGKKGDASHLATTE 298

Query: 287 FDRSVYLLSSLMGSF 301
           FD +   ++  MG F
Sbjct: 299 FDVTKKEITP-MGGF 312


>gi|284073154|gb|ADB77816.1| 60S ribosomal protein L3 [Chlamydomonas reinhardtii]
 gi|284073156|gb|ADB77817.1| 60S ribosomal protein L3 [Cladophora coelothrix]
          Length = 384

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 229/315 (72%), Positives = 256/315 (81%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPR GSLGF PRKR  R +GKVK+FP+DD SKP  LTAF+GYKAGMTHIVRDV
Sbjct: 1   MSHRKFEHPRSGSLGFSPRKRCRRGKGKVKSFPRDDASKPVHLTAFMGYKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCE VTIIE PP+VVVG VGYVKTPRGLRSL TVWA+HL+EEV+RRFYK
Sbjct: 61  EKPGSKLHKKETCEPVTIIECPPMVVVGAVGYVKTPRGLRSLNTVWAEHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KKY   DGKK I+A+L  +KK+C VIR              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKKY--SDGKKAIEAELAALKKHCCVIRVLAHTQVKKLGFGVKKAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           ME+QVNGG+VAQKVDFAY  FEKQ+ +DAVFQ +EMID I +TKG G +GVV RWGVTRL
Sbjct: 179 MEVQVNGGTVAQKVDFAYSMFEKQVSVDAVFQPNEMIDTIAITKGHGVQGVVQRWGVTRL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPARV +TVARAGQ G+HHRTE+NKK+YK+GK    SH A TE
Sbjct: 239 PRKTHRGLRKVACIGAWHPARVKWTVARAGQQGFHHRTEINKKVYKIGKKGDASHLATTE 298

Query: 287 FDRSVYLLSSLMGSF 301
           FD +   ++  MG F
Sbjct: 299 FDVTKKEITP-MGGF 312


>gi|145340549|ref|XP_001415385.1| Ribosomal protein L3, component of cytosolic 80S ribosome and 60S
           large subunit [Ostreococcus lucimarinus CCE9901]
 gi|144575608|gb|ABO93677.1| Ribosomal protein L3, component of cytosolic 80S ribosome and 60S
           large subunit [Ostreococcus lucimarinus CCE9901]
          Length = 386

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 222/317 (70%), Positives = 257/317 (81%), Gaps = 20/317 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPR+G+LGFLP+KR+ R RGKVK+FPKDD SKP  LTAF+G+KAGMTHIVRDV
Sbjct: 1   MSHRKFEHPRYGNLGFLPKKRSKRSRGKVKSFPKDDASKPPHLTAFMGFKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           +KPGSK+HKKETCE+VTIIE P L+VVG+VGYV+TP+GLR   TVWA+HLN+EVRRRFYK
Sbjct: 61  DKPGSKMHKKETCESVTIIECPELIVVGLVGYVRTPKGLRGKKTVWAEHLNDEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NW KSKKKAFTKYTK Y      KD    L+++KK C VIR               KKAH
Sbjct: 121 NWFKSKKKAFTKYTKNYTNGSIDKD----LDELKKSCDVIRVIAHTQVRKVSGLKQKKAH 176

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           +MEIQVNGG VA KVDF Y  FEK +P+D VFQ+DEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 177 IMEIQVNGGDVAAKVDFGYALFEKAVPVDTVFQQDEMIDLIGVTKGKGYEGVVTRWGVTR 236

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKV CIGAWHP+RVS+TVARAGQ+GYHHRTE+NKK+YK+GKA Q+S  A T
Sbjct: 237 LPRKTHRGLRKVGCIGAWHPSRVSYTVARAGQHGYHHRTEINKKVYKIGKAGQDSFGAST 296

Query: 286 EFDRSVYLLSSLMGSFS 302
             D +   ++  MG F+
Sbjct: 297 FHDPTEKEITP-MGGFA 312


>gi|388502726|gb|AFK39429.1| unknown [Lotus japonicus]
          Length = 350

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 221/301 (73%), Positives = 251/301 (83%), Gaps = 25/301 (8%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVK+FPKDDPSK  +LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKSFPKDDPSKSPKLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCE VTIIETPP+V+VGVVGYVKTPRG+R+L TVWAQHL+EEV+RRFYK
Sbjct: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGMRTLNTVWAQHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKV 180
           NWCKSKKKAF+KY+K++E+++GKK++QAQLEK+KKY TV+R  AH    ++ G       
Sbjct: 121 NWCKSKKKAFSKYSKQFESEEGKKNVQAQLEKIKKYATVVRVLAHTQIRKMKG------- 173

Query: 181 DFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACI 240
                             K +   IIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACI
Sbjct: 174 -----------------LKQKKAHIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACI 216

Query: 241 GAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRSVYLLSSLMGS 300
           GAWHPARVSFTVARAGQNGYHHRTE+NKKIY+LG A  ESHSA+TEFDR+   ++  MG 
Sbjct: 217 GAWHPARVSFTVARAGQNGYHHRTELNKKIYRLGMAGDESHSAITEFDRTEKEITP-MGG 275

Query: 301 F 301
           F
Sbjct: 276 F 276


>gi|148807241|gb|ABR13330.1| putative 60S ribosomal protein L3 [Prunus dulcis]
          Length = 284

 Score =  450 bits (1157), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 227/273 (83%), Positives = 243/273 (89%), Gaps = 15/273 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDPSKPC+LTAFLGYKAGMTHIV DV
Sbjct: 7   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCKLTAFLGYKAGMTHIVGDV 66

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTIIE PP+VVVGVVGYVKTPRGLRSL TVWAQHL+EEV+RRFYK
Sbjct: 67  EKPGSKLHKKETCEAVTIIEAPPMVVVGVVGYVKTPRGLRSLNTVWAQHLSEEVKRRFYK 126

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NWCKSKKKAF KY+K YE+++GKK I++Q EK+ KY TVIR               KKAH
Sbjct: 127 NWCKSKKKAFAKYSKNYESEEGKKSIESQFEKLIKYATVIRVLAHTQIRKMKGLKQKKAH 186

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQVNGG++AQKV+FA  FFEKQ+PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 187 LMEIQVNGGTIAQKVEFAKSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 246

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQN 258
           LPRKTHRGLRKVACIGAWHPAR S TVARAG  
Sbjct: 247 LPRKTHRGLRKVACIGAWHPARFSXTVARAGHE 279


>gi|390601087|gb|EIN10481.1| 60S ribosomal protein L3 [Punctularia strigosozonata HHB-11173 SS5]
          Length = 388

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 208/315 (66%), Positives = 259/315 (82%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSLGFLPRKRA+RHRGKVK+FPKDDP KP  LTA +GYKAGMTH+VRD+
Sbjct: 1   MSHRKYEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAVMGYKAGMTHVVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  EAVTI+ETPP++VVGVVGYV+TPRGLR+L TVWA HL++E++RRFYK
Sbjct: 61  DRPGSKMHKREVVEAVTIVETPPMIVVGVVGYVETPRGLRTLTTVWASHLSDELKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW +SKKKAFT+Y KK   D+G K +Q +LE+++KYCTV+R              KKAHL
Sbjct: 121 NWYRSKKKAFTRYAKKAAEDNG-KSVQRELERIRKYCTVVRVLAHTQIRKTGLAQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGS+A KVDFA+G FEK I +++VF++DE++D+I VTKG G+EGV  RWG  +L
Sbjct: 180 MEIQVNGGSIADKVDFAHGLFEKPIEVNSVFEQDEVVDVIAVTKGHGFEGVTHRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE+NKKIY++G  S E  +A TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTELNKKIYRVGSGSDEG-NASTE 298

Query: 287 FDRSVYLLSSLMGSF 301
            D +   ++  MG F
Sbjct: 299 SDVTKKTITP-MGGF 312


>gi|414587230|tpg|DAA37801.1| TPA: hypothetical protein ZEAMMB73_342493 [Zea mays]
 gi|414866107|tpg|DAA44664.1| TPA: hypothetical protein ZEAMMB73_480377 [Zea mays]
          Length = 352

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 222/316 (70%), Positives = 244/316 (77%), Gaps = 53/316 (16%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKR+SRHRGK                                
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRSSRHRGK-------------------------------- 28

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
                +LHKKETCEAVTIIETPPLV+VG+V YVKTPRGLR+L +VWAQHL+EEVRRRFYK
Sbjct: 29  -----ELHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEEVRRRFYK 83

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NWCKSKKKAFTKY  KYE D GKK+IQ QLEKMKKY +VIR               KKAH
Sbjct: 84  NWCKSKKKAFTKYALKYENDAGKKEIQLQLEKMKKYASVIRVIAHTQIRKMKGLKQKKAH 143

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQVNGG++A KVD+ Y FFEK++P+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 144 LMEIQVNGGTIADKVDYGYKFFEKEVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 203

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GKA QE+H A T
Sbjct: 204 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKAGQETHDAST 263

Query: 286 EFDRSVYLLSSLMGSF 301
           EFDR+   ++  MG F
Sbjct: 264 EFDRTEKDITP-MGGF 278


>gi|395328899|gb|EJF61289.1| 60S ribosomal protein L3 [Dichomitus squalens LYAD-421 SS1]
          Length = 388

 Score =  443 bits (1139), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 207/313 (66%), Positives = 256/313 (81%), Gaps = 16/313 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSLGFLPRKRA+RHRGKVKAFPKDDP KP  LTA LGYKAGMTH+VRD+
Sbjct: 1   MSHRKYEAPRHGSLGFLPRKRAARHRGKVKAFPKDDPKKPVHLTAILGYKAGMTHVVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           E+PGSK+HK+E  EAVTI+ETPPL+VVGVVGYV+TPRGLR+L TVWA HL++E++RRFYK
Sbjct: 61  ERPGSKMHKREVVEAVTIVETPPLIVVGVVGYVETPRGLRTLTTVWASHLSDELKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW +SKKKAFT+Y KK+  +DG K I  +LE+++KYCTV+R              KKAHL
Sbjct: 121 NWYRSKKKAFTRYAKKH-AEDGGKSIARELERIRKYCTVVRVLAHTQIRKTGLSQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGSV  KV+FA+G FEK + + +VF++DE++D+I VTKG G+EGV  RWG  +L
Sbjct: 180 MEIQVNGGSVVDKVEFAHGLFEKPVEVSSVFEQDEVVDVIAVTKGHGFEGVTHRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE+NKKIY++G+   +  +A TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTELNKKIYRIGRGEDDG-NASTE 298

Query: 287 FDRSVYLLSSLMG 299
            D +   ++ L G
Sbjct: 299 HDITKKTITPLGG 311


>gi|303273052|ref|XP_003055887.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226461971|gb|EEH59263.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 387

 Score =  443 bits (1139), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 217/316 (68%), Positives = 250/316 (79%), Gaps = 18/316 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPR G LGFLP+KR+ R RGK K FP+DDP+ P  LTAFLG+KAGMTHIVRDV
Sbjct: 1   MSHRKFEHPRLGHLGFLPKKRSQRARGKCKKFPRDDPTSPPHLTAFLGFKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           +KPGSKLHKKET EAVTI+ETP ++VVGVVGYVKTP+GLR+L TVWA+HL+ E++RRFYK
Sbjct: 61  DKPGSKLHKKETLEAVTIVETPAMIVVGVVGYVKTPQGLRALNTVWAEHLSVEIKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NW KSK+KAFTKY KKY    G   I  +L+ +KK   V+R               KKAH
Sbjct: 121 NWYKSKRKAFTKYEKKYANGSGA--IDQELDALKKNADVVRVIAHTQVRKVKNLKQKKAH 178

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           +MEIQVNGGSVA KVDFAY FFEK +P+DAVF KDEMID I VTKGKG+EGVVTRWGVTR
Sbjct: 179 MMEIQVNGGSVADKVDFAYKFFEKAVPVDAVFAKDEMIDCISVTKGKGFEGVVTRWGVTR 238

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKV CIGAWHPARV +TVAR GQ+GYHHRTE+NKKIY++GK    SH A T
Sbjct: 239 LPRKTHRGLRKVGCIGAWHPARVGYTVARPGQHGYHHRTEINKKIYRVGKEGDSSHKAST 298

Query: 286 EFDRSVYLLSSLMGSF 301
           + D +   ++  MG F
Sbjct: 299 DHDATEKDITP-MGGF 313


>gi|323455903|gb|EGB11771.1| hypothetical protein AURANDRAFT_36266 [Aureococcus anophagefferens]
          Length = 393

 Score =  442 bits (1137), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 212/317 (66%), Positives = 258/317 (81%), Gaps = 18/317 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHG+LGFLP+KR   H G+V++FPKDD SKPC LTAF+ YKAGMTH+VRDV
Sbjct: 1   MSHRKFEAPRHGNLGFLPKKRTRHHHGRVRSFPKDDASKPCHLTAFMAYKAGMTHVVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HKKE  EAVT++E PP+VVVG+VGYV+TPRGLRSL TVWA  L+EEV+RRFYK
Sbjct: 61  DRPGSKVHKKEIVEAVTVLEAPPMVVVGLVGYVETPRGLRSLATVWAAFLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYE-TDDGKKDIQAQLEKMKKYCTVIR--------------KKAH 165
           NW KSK+KA TKY  KY  +D G+KD+  +LE++KKYC+V+R              KKAH
Sbjct: 121 NWYKSKRKAMTKYAAKYSASDGGEKDVDRELERIKKYCSVVRVIAHTQVKKLKLRQKKAH 180

Query: 166 LMEIQVNGGS-VAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 224
           +MEIQVNGG+ VA KVD+A G FE+++P+D VF  +EMID++G T+G G EGVVTRWGVT
Sbjct: 181 VMEIQVNGGADVAAKVDYAKGLFEQEVPVDTVFNANEMIDVLGATRGHGTEGVVTRWGVT 240

Query: 225 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAM 284
           RLPRKTHRGLRKVACIGAWHP+RVSFTVAR+GQNGYHHRTEMNKKIY++GK S ++ SA 
Sbjct: 241 RLPRKTHRGLRKVACIGAWHPSRVSFTVARSGQNGYHHRTEMNKKIYRIGK-SGDAKSAS 299

Query: 285 TEFDRSVYLLSSLMGSF 301
           TE D +   ++  MG F
Sbjct: 300 TEADLTEKSITP-MGGF 315


>gi|328852642|gb|EGG01786.1| hypothetical protein MELLADRAFT_45021 [Melampsora larici-populina
           98AG31]
          Length = 388

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 211/316 (66%), Positives = 257/316 (81%), Gaps = 19/316 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+EHPRHGS GFLPRKRA+RHRGKVK+FP+DD +KP  LTA LGYKAGMTHIVR++
Sbjct: 1   MSHRKWEHPRHGSTGFLPRKRAARHRGKVKSFPRDDKTKPVHLTAMLGYKAGMTHIVREL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           E+PGSK+HK+E  EAVTIIETPP+V+VGVVGYV+TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  ERPGSKMHKREVVEAVTIIETPPMVIVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKY-ETDDGKKDIQAQLEKMKKYCTVIR--------------KKAH 165
           NW +SKKKAFTKY KK+ E+  G   I  +LE+++KYCTV+R              KKAH
Sbjct: 121 NWYRSKKKAFTKYAKKHAESSTG--SIARELERIRKYCTVVRVLAHTQIRKTGLKQKKAH 178

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQVNGGSVA KVDFA   FEK   + ++F++DE ID+I VTKGKG+EGV  RWG  +
Sbjct: 179 LMEIQVNGGSVADKVDFAKSHFEKTFDVSSIFEQDENIDVIAVTKGKGFEGVTHRWGTKK 238

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTH+GLRKVACIGAWHP++V FTVARAGQNGYHHRTE+NKK++++GK   E+ +A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSKVMFTVARAGQNGYHHRTELNKKVFRVGKGGDEA-NATT 297

Query: 286 EFDRSVYLLSSLMGSF 301
           EFD +   ++  MG F
Sbjct: 298 EFDTTKKAITP-MGGF 312


>gi|326911917|ref|XP_003202302.1| PREDICTED: 60S ribosomal protein L3-like [Meleagris gallopavo]
          Length = 403

 Score =  439 bits (1129), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 210/319 (65%), Positives = 258/319 (80%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+V+VG+VGYV+TPRGLRS  T++A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVQTPRGLRSFKTIFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ D+GKK ++     MKKYC VIR              KK+HL
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDEGKKQLEKDFNSMKKYCQVIRVMAHTQMRLLPLRQKKSHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+VA+KVD+A    E+Q+P+ +VF +DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQVNGGTVAEKVDWAREKLEQQVPVSSVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ------ES 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+  Q        
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYQIKDGKLIK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   ++ L G
Sbjct: 301 NNASTDYDLSDKSINPLGG 319


>gi|224095133|ref|XP_002198398.1| PREDICTED: 60S ribosomal protein L3-like [Taeniopygia guttata]
          Length = 403

 Score =  439 bits (1128), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 211/319 (66%), Positives = 257/319 (80%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTIIETPP+V+VG+VGYV+TPRGLRS  T++A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIIETPPMVIVGIVGYVQTPRGLRSFKTIFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ +DGKK ++     MKKYC VIR              KK+HL
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFNSMKKYCQVIRVMAHTQMRLLPLRQKKSHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+VA+KVD+A    E+Q+P+  VF +DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQVNGGTVAEKVDWAREKLEQQVPVATVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ------ES 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+  Q        
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYQIKDGKLIK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   ++ L G
Sbjct: 301 NNASTDYDLSDKSINPLGG 319


>gi|384248786|gb|EIE22269.1| ribosomal protein L3 component of cytosolic 80S ribosome and 60S
           large subunit [Coccomyxa subellipsoidea C-169]
          Length = 390

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 219/315 (69%), Positives = 259/315 (82%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLP+KR  R +GK+K+FP+DDPSKPC LTAF+GYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPKKRCRRGKGKIKSFPRDDPSKPCHLTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKET EAVTIIETPP++VVGVVGYV T  GLRSL TVWA+HL+ EV+R+FYK
Sbjct: 61  EKPGSKLHKKETAEAVTIIETPPMIVVGVVGYVITATGLRSLNTVWAEHLSNEVKRKFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW K+KKKAF +Y KKY   DGKK I+ +L ++KK C+VIR              KKAH+
Sbjct: 121 NWFKAKKKAFHRYAKKY--TDGKKTIEEELNQLKKNCSVIRVLAHTQITKIGYGQKKAHM 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQ+NGGS+  KVDFAY  FEK + +D++FQ +EMID I +TKG+G EGVVTRWGVTRL
Sbjct: 179 SEIQINGGSIEDKVDFAYQLFEKPVTVDSIFQANEMIDTIAITKGRGTEGVVTRWGVTRL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPARVS+TVARAGQ+G+HHRTEMNKK+YK+GK  +ESH A TE
Sbjct: 239 PRKTHRGLRKVACIGAWHPARVSWTVARAGQHGFHHRTEMNKKVYKIGKKGEESHKATTE 298

Query: 287 FDRSVYLLSSLMGSF 301
           +D +   ++  MG F
Sbjct: 299 YDVTNKEITP-MGGF 312


>gi|396472938|ref|XP_003839232.1| similar to 60S ribosomal protein L3 [Leptosphaeria maculans JN3]
 gi|312215801|emb|CBX95753.1| similar to 60S ribosomal protein L3 [Leptosphaeria maculans JN3]
          Length = 392

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 211/315 (66%), Positives = 251/315 (79%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSL FLPRKRA+RHRGKVK+FPKDDP KP  LTA +GYKAGM+ IVRD+
Sbjct: 1   MSHRKFEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMSTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+KLHKKE  EAVTIIETPP++ VG+VGY++TPRGLRSL TVWA+HL++EV+RRFY+
Sbjct: 61  DRPGAKLHKKEIVEAVTIIETPPMIAVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYR 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK+  + G   I A+LE+MKKYCTVIR              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKKHSENSG-ASITAELERMKKYCTVIRVLAHTQISKTPLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGS+A KV +A+G FEK I I ++F+ +EMID+I VTKGKGY GV +RWG  +L
Sbjct: 180 MEIQVNGGSIADKVSYAHGLFEKPIEISSIFEANEMIDVIAVTKGKGYNGVTSRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHPA V +TVARAGQ GYHHRT +N KIY++GK   E  +A TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPAHVQWTVARAGQMGYHHRTSVNHKIYRIGKGEDEG-NASTE 298

Query: 287 FDRSVYLLSSLMGSF 301
           FD S   ++  MG F
Sbjct: 299 FDVSKKQITP-MGGF 312


>gi|169861488|ref|XP_001837378.1| 60S ribosomal protein L3 [Coprinopsis cinerea okayama7#130]
 gi|116501399|gb|EAU84294.1| 60S ribosomal protein L3 [Coprinopsis cinerea okayama7#130]
          Length = 388

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 205/313 (65%), Positives = 252/313 (80%), Gaps = 16/313 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSLGFLPRKRA+RHRGKVKAFPKDDP KP  LTA +GYKAGMTH+VRD+
Sbjct: 1   MSHRKYEAPRHGSLGFLPRKRAARHRGKVKAFPKDDPKKPVHLTAMMGYKAGMTHVVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK HK+E  EAVTIIETPP++ VG+VGYV+TPRGLR+L TVWA HL++EV+RRFYK
Sbjct: 61  DRPGSKFHKREVVEAVTIIETPPMIAVGLVGYVETPRGLRTLTTVWANHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW +SKKKAFT+Y KK   +DG K +Q +LE+++KYC+V+R              KKAHL
Sbjct: 121 NWYRSKKKAFTRYAKK-NAEDGGKSVQRELERIRKYCSVVRVLAHTQIRKTGLAQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGGSVA KVDF Y  FEK I + +VF++DE +D+I VTKG G+EGV  RWG  +L
Sbjct: 180 MEIQINGGSVADKVDFGYKLFEKPIEVSSVFEQDENVDVIAVTKGHGFEGVTHRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP+ V F+VARAGQNGYHHRTE+NKKIY++G  S +  +A TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPSNVMFSVARAGQNGYHHRTEINKKIYRIGLGSDDG-NASTE 298

Query: 287 FDRSVYLLSSLMG 299
            D +  +++ L G
Sbjct: 299 SDITKKVITPLGG 311


>gi|395819741|ref|XP_003783238.1| PREDICTED: 60S ribosomal protein L3 [Otolemur garnettii]
          Length = 403

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 210/319 (65%), Positives = 257/319 (80%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  T++A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ DDGKK ++     MKKYC VIR              KKAHL
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDDGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLPLRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQES 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   ++ L G
Sbjct: 301 NNASTDYDLSDKSINPLGG 319


>gi|57525400|ref|NP_001006241.1| 60S ribosomal protein L3 [Gallus gallus]
 gi|53132964|emb|CAG31951.1| hypothetical protein RCJMB04_14e22 [Gallus gallus]
          Length = 403

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 209/319 (65%), Positives = 258/319 (80%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+V+VG+VGYV+TPRGLRS  T++A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVQTPRGLRSFKTIFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ ++GKK ++     MKKYC VIR              KK+HL
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEEGKKQLEKDFNSMKKYCQVIRVMAHTQMRLLPLRQKKSHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+VA+KVD+A    E+Q+P+ +VF +DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQVNGGTVAEKVDWAREKLEQQVPVSSVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ------ES 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+  Q        
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYQIKDGKLIK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   ++ L G
Sbjct: 301 NNASTDYDLSDKSINPLGG 319


>gi|126339540|ref|XP_001366844.1| PREDICTED: 60S ribosomal protein L3-like [Monodelphis domestica]
          Length = 476

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 209/319 (65%), Positives = 257/319 (80%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 74  MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPIHLTAFLGYKAGMTHIVREV 133

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+V+VG+VGYV+TPRGLRS  T++A+H+++E +RRFYK
Sbjct: 134 DRPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVQTPRGLRSFKTIFAEHISDECKRRFYK 193

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ DDGKK ++     MKKYC VIR              KK+HL
Sbjct: 194 NWHKSKKKAFTKYCKKWQDDDGKKQLEKDFNSMKKYCQVIRVIAHTQMRLLPLRQKKSHL 253

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+V++K+D+A    E+Q+P+  VF +DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 254 MEIQVNGGNVSEKLDWAREKLEQQVPVSTVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 313

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ------ES 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+  Q        
Sbjct: 314 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYQIKDGKLIK 373

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   ++ L G
Sbjct: 374 NNASTDYDLSDKSINPLGG 392


>gi|295674007|ref|XP_002797549.1| 60S ribosomal protein L3 [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226280199|gb|EEH35765.1| 60S ribosomal protein L3 [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226286840|gb|EEH42353.1| 60S ribosomal protein L3 [Paracoccidioides brasiliensis Pb18]
          Length = 392

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 208/315 (66%), Positives = 252/315 (80%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSL FLPRKR++RHRGKVK+FPKDDP KP  LTA +GYKAGMT +VRD+
Sbjct: 1   MSHRKFEAPRHGSLAFLPRKRSARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTVVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           E+PG+K+HKKE  EAVTI+ETPP++ VGVVGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  ERPGAKMHKKEIVEAVTIVETPPMIAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY K +  + G   +  +LE++KKYCTV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKNHSENTG-ASVSRELERIKKYCTVVRLLAHTQIRKTPLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           ME+QVNGGS+A KVDFA+G FEK I ID+VF++DEMID+I VTKG G+ GV +RWG  +L
Sbjct: 180 MEVQVNGGSIADKVDFAHGLFEKPIQIDSVFEQDEMIDVIAVTKGHGFNGVTSRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP+ V +TVARAGQ+GYHHRT  N KIY++GK S E  +A TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPSHVQWTVARAGQDGYHHRTSCNHKIYRIGKGSDEG-NASTE 298

Query: 287 FDRSVYLLSSLMGSF 301
           FD S   ++  MG F
Sbjct: 299 FDVSKKQITP-MGGF 312


>gi|327349122|gb|EGE77979.1| hypothetical protein BDDG_00916 [Ajellomyces dermatitidis ATCC
           18188]
          Length = 392

 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 210/315 (66%), Positives = 251/315 (79%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSL FLPRKR++RHRGKVK+FPKDDP KP  LTA +GYKAGMT  VRD+
Sbjct: 1   MSHRKFEAPRHGSLAFLPRKRSARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTTVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+K+HKKE  EAVTI+ETPP++ VGVVGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGAKMHKKEIVEAVTIVETPPMIAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY K +  + G   I  +LE++KKYCTV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKNHSENSG-ASISRELERIKKYCTVVRVLAHTQIRKTPLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           ME+QVNGGSVA KVDFA+G FEK I ID+VF+KDEMID+I VTKG G+ GV +RWG  +L
Sbjct: 180 MEVQVNGGSVADKVDFAHGLFEKPIEIDSVFEKDEMIDVIAVTKGHGFNGVTSRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP+ V +TVARAGQ+GYHHRT  N KIY++GK S E  +A TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPSHVQWTVARAGQDGYHHRTSCNHKIYRIGKGSDEG-NASTE 298

Query: 287 FDRSVYLLSSLMGSF 301
           FD S   ++  MG F
Sbjct: 299 FDVSKKQITP-MGGF 312


>gi|443731990|gb|ELU16883.1| hypothetical protein CAPTEDRAFT_21042 [Capitella teleta]
          Length = 414

 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 209/321 (65%), Positives = 256/321 (79%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR++RHRGKVKAFPKDDPSKP  LT+FL YKAGMTH+VR+V
Sbjct: 11  MSHRKFSAPRHGSLGFLPRKRSTRHRGKVKAFPKDDPSKPVHLTSFLAYKAGMTHVVREV 70

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK HKKE  +AVTI+E PP++ +GV+GY++TPRGLR+L TVWA+HL+EE RRRFYK
Sbjct: 71  DRPGSKAHKKEVVDAVTILEAPPMIAIGVIGYIETPRGLRALKTVWAEHLSEECRRRFYK 130

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW +SKKKAFTK +KK++ + GKK+I+  L KMKKYC+VIR              KKAH+
Sbjct: 131 NWYRSKKKAFTKASKKWQDEVGKKEIEKDLAKMKKYCSVIRVIAHTQMKLLKKRQKKAHI 190

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+VAQKVD+A   FEKQIP+D+VF  DEMID IGVTKG G++GV +RW   +L
Sbjct: 191 MEIQVNGGTVAQKVDWAREHFEKQIPVDSVFAPDEMIDCIGVTKGHGFKGVTSRWHTKKL 250

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAM-- 284
           PRKTH+GLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIY++GK     +  +  
Sbjct: 251 PRKTHKGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYRMGKGVHTENGKLIK 310

Query: 285 ----TEFDRSVYLLSSLMGSF 301
               TE+D +   ++  MG F
Sbjct: 311 NNGSTEYDVTEKTITP-MGGF 330


>gi|240275987|gb|EER39500.1| large subunit ribosomal protein L3 [Ajellomyces capsulatus H143]
 gi|325093348|gb|EGC46658.1| large subunit ribosomal protein L3 [Ajellomyces capsulatus H88]
          Length = 439

 Score =  436 bits (1121), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 209/315 (66%), Positives = 250/315 (79%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSL FLPRKR++RHRGKVK+FPKDDP KP  LTA +GYKAGMT  VRD+
Sbjct: 48  MSHRKFEAPRHGSLAFLPRKRSARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTTVRDL 107

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           E+PG+K+HKKE  EAVTI+ETPP++ VGVVGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 108 ERPGAKMHKKEIVEAVTIVETPPMIAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 167

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY K +  + G   +  +LE++KKYCTV+R              KKAHL
Sbjct: 168 NWYKSKKKAFTKYAKNHSENKG-ASVARELERIKKYCTVVRLLAHTQIRKTPLKQKKAHL 226

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           ME+QVNGGSVA KVDFA+G FEK I ID +F+KDEMID+I VTKG G+ GV +RWG  +L
Sbjct: 227 MEVQVNGGSVADKVDFAHGLFEKPIEIDTIFEKDEMIDVIAVTKGHGFNGVTSRWGTKKL 286

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP+ V +TVARAGQ+GYHHRT  N KIY++GK S E  +A TE
Sbjct: 287 PRKTHKGLRKVACIGAWHPSHVQWTVARAGQDGYHHRTSCNHKIYRIGKGSDEG-NASTE 345

Query: 287 FDRSVYLLSSLMGSF 301
           FD S   ++  MG F
Sbjct: 346 FDVSKKQITP-MGGF 359


>gi|343959926|dbj|BAK63820.1| 60S ribosomal protein L3 [Pan troglodytes]
          Length = 403

 Score =  436 bits (1121), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 210/319 (65%), Positives = 257/319 (80%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  TV+A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ +DGKK ++     MKKYC VIR              KKAHL
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQES 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   ++ L G
Sbjct: 301 NNASTDYDLSDKSINPLGG 319


>gi|225563388|gb|EEH11667.1| large subunit ribosomal protein L3 [Ajellomyces capsulatus G186AR]
          Length = 552

 Score =  436 bits (1120), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 209/315 (66%), Positives = 250/315 (79%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSL FLPRKR++RHRGKVK+FPKDDP KP  LTA +GYKAGMT  VRD+
Sbjct: 161 MSHRKFEAPRHGSLAFLPRKRSARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTTVRDL 220

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           E+PG+K+HKKE  EAVTI+ETPP++ VGVVGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 221 ERPGAKMHKKEIVEAVTIVETPPMIAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 280

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY K +  + G   +  +LE++KKYCTV+R              KKAHL
Sbjct: 281 NWYKSKKKAFTKYAKNHSENKG-ASVARELERIKKYCTVVRLLAHTQIRKTPLKQKKAHL 339

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           ME+QVNGGSVA KVDFA+G FEK I ID +F+KDEMID+I VTKG G+ GV +RWG  +L
Sbjct: 340 MEVQVNGGSVADKVDFAHGLFEKPIEIDTIFEKDEMIDVIAVTKGHGFNGVTSRWGTKKL 399

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP+ V +TVARAGQ+GYHHRT  N KIY++GK S E + A TE
Sbjct: 400 PRKTHKGLRKVACIGAWHPSHVQWTVARAGQDGYHHRTSCNHKIYRIGKGSDEGN-ASTE 458

Query: 287 FDRSVYLLSSLMGSF 301
           FD S   ++  MG F
Sbjct: 459 FDVSKKQITP-MGGF 472


>gi|60654345|gb|AAX29863.1| ribosomal protein L3 [synthetic construct]
          Length = 404

 Score =  436 bits (1120), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 210/319 (65%), Positives = 257/319 (80%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  TV+A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ +DGKK ++     MKKYC VIR              KKAHL
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQES 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   ++ L G
Sbjct: 301 NNASTDYDLSDKSINPLGG 319


>gi|4506649|ref|NP_000958.1| 60S ribosomal protein L3 isoform a [Homo sapiens]
 gi|302148475|ref|NP_001180483.1| ribosomal protein L3 [Macaca mulatta]
 gi|397502001|ref|XP_003821661.1| PREDICTED: 60S ribosomal protein L3 isoform 1 [Pan paniscus]
 gi|402884272|ref|XP_003905611.1| PREDICTED: 60S ribosomal protein L3 [Papio anubis]
 gi|426394514|ref|XP_004063540.1| PREDICTED: 60S ribosomal protein L3 isoform 1 [Gorilla gorilla
           gorilla]
 gi|730565|sp|P39023.2|RL3_HUMAN RecName: Full=60S ribosomal protein L3; AltName: Full=HIV-1 TAR
           RNA-binding protein B; Short=TARBP-B
 gi|313659|emb|CAA51839.1| ribosomal protein L3 [Homo sapiens]
 gi|12803201|gb|AAH02408.1| Ribosomal protein L3 [Homo sapiens]
 gi|13623709|gb|AAH06483.1| Ribosomal protein L3, isoform a [Homo sapiens]
 gi|14124954|gb|AAH08003.1| Ribosomal protein L3 [Homo sapiens]
 gi|15082461|gb|AAH12146.1| Ribosomal protein L3 [Homo sapiens]
 gi|15215372|gb|AAH12786.1| Ribosomal protein L3 [Homo sapiens]
 gi|15489128|gb|AAH13674.1| Ribosomal protein L3 [Homo sapiens]
 gi|15559314|gb|AAH14017.1| Ribosomal protein L3 [Homo sapiens]
 gi|15929157|gb|AAH15032.1| Ribosomal protein L3, isoform a [Homo sapiens]
 gi|16041773|gb|AAH15767.1| Ribosomal protein L3 [Homo sapiens]
 gi|21104408|dbj|BAB93474.1| ribosomal protein L3 [Homo sapiens]
 gi|39794638|gb|AAH63662.1| Ribosomal protein L3 [Homo sapiens]
 gi|47678663|emb|CAG30452.1| RPL3 [Homo sapiens]
 gi|56972440|gb|AAH88373.1| Ribosomal protein L3 [Homo sapiens]
 gi|78395076|gb|AAI07712.1| Ribosomal protein L3 [Homo sapiens]
 gi|90075246|dbj|BAE87303.1| unnamed protein product [Macaca fascicularis]
 gi|90076620|dbj|BAE87990.1| unnamed protein product [Macaca fascicularis]
 gi|90076640|dbj|BAE88000.1| unnamed protein product [Macaca fascicularis]
 gi|109451472|emb|CAK54597.1| RPL3 [synthetic construct]
 gi|109452068|emb|CAK54896.1| RPL3 [synthetic construct]
 gi|119580714|gb|EAW60310.1| ribosomal protein L3, isoform CRA_a [Homo sapiens]
 gi|189055072|dbj|BAG38056.1| unnamed protein product [Homo sapiens]
 gi|261859736|dbj|BAI46390.1| ribosomal protein L3 [synthetic construct]
          Length = 403

 Score =  436 bits (1120), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 210/319 (65%), Positives = 257/319 (80%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  TV+A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ +DGKK ++     MKKYC VIR              KKAHL
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQES 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   ++ L G
Sbjct: 301 NNASTDYDLSDKSINPLGG 319


>gi|395541568|ref|XP_003772714.1| PREDICTED: 60S ribosomal protein L3-like [Sarcophilus harrisii]
          Length = 428

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 208/318 (65%), Positives = 256/318 (80%), Gaps = 20/318 (6%)

Query: 2   SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
           SHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDDP+KP  LTAFLGYKAGMTHIVR+V+
Sbjct: 27  SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPTKPIHLTAFLGYKAGMTHIVREVD 86

Query: 62  KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
           +PGSK++KKE  EAVTI+ETPP+V+VG+VGYV+TPRGLRS  T++A+H+++E +RRFYKN
Sbjct: 87  RPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVQTPRGLRSFKTIFAEHISDECKRRFYKN 146

Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLM 167
           W KSKKKAFTKY KK++ DDGKK ++     MKKYC VIR              KK+HLM
Sbjct: 147 WHKSKKKAFTKYCKKWQDDDGKKQLEKDFNSMKKYCQVIRVIAHTQMRLLPLRQKKSHLM 206

Query: 168 EIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 227
           EIQVNGGSV++K+D+A    E+Q+P+  VF +DEMID+IGVTKGKGY+GV +RW   +LP
Sbjct: 207 EIQVNGGSVSEKLDWAREKLEQQVPVSTVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP 266

Query: 228 RKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ------ESH 281
           RKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+  Q        +
Sbjct: 267 RKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYQIKDGKLIKN 326

Query: 282 SAMTEFDRSVYLLSSLMG 299
           +A T++D S   ++ L G
Sbjct: 327 NASTDYDLSDKSINPLGG 344


>gi|331233068|ref|XP_003329195.1| 60S ribosomal protein L3 [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309308185|gb|EFP84776.1| 60S ribosomal protein L3 [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 388

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 209/316 (66%), Positives = 256/316 (81%), Gaps = 19/316 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+EHPRHGS GFLPRKRA+RHRGKVK+FP DD +KP  LTA LGYKAGMTHI+RD+
Sbjct: 1   MSHRKWEHPRHGSTGFLPRKRAARHRGKVKSFPVDDKTKPVHLTAMLGYKAGMTHILRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  EAVTI+ETPP+V+VGVVGYV+TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGSKMHKREVVEAVTIVETPPMVIVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKY-ETDDGKKDIQAQLEKMKKYCTVIR--------------KKAH 165
           NW +SKKKAFTKY KK+ E+  G   I  +LE+++KYCTV+R              KKAH
Sbjct: 121 NWYRSKKKAFTKYAKKHAESSTG--SIARELERIRKYCTVVRVLAHTQIRKTGLKQKKAH 178

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQVNGGSVA KVDFA   FEK   + +VF+++E ID+I VTKGKGYEGV  RWG  +
Sbjct: 179 LMEIQVNGGSVADKVDFAKSHFEKTFDVSSVFEQNENIDVIAVTKGKGYEGVTHRWGCKK 238

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTH+GLRKVACIGAWHP++V FTVARAGQ+GYHHRTE+NKK++++GK   E+ +A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSKVMFTVARAGQDGYHHRTELNKKVFRVGKGGDEA-NATT 297

Query: 286 EFDRSVYLLSSLMGSF 301
           EFD +   ++  MG F
Sbjct: 298 EFDTTTKAITP-MGGF 312


>gi|119481241|ref|XP_001260649.1| 60S ribosomal protein L3 [Neosartorya fischeri NRRL 181]
 gi|119408803|gb|EAW18752.1| transcriptional corepressor Cyc8, putative [Neosartorya fischeri
           NRRL 181]
          Length = 392

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 211/315 (66%), Positives = 251/315 (79%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSL FLPRKRA+RHRGKVK+FPKDDP KP  LTA +GYKAGMT +VRD+
Sbjct: 1   MSHRKYEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTASMGYKAGMTTVVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+K+HKKE  EAVTIIETPPLV VGVVGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGAKMHKKEIVEAVTIIETPPLVAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK+  + G   I  +LE++KKYCTV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKKHAEESG-ASITRELERIKKYCTVVRVLAHTQIRKTPLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGSVA KVDFA   FEK I ID++F+KDEMID+I VTKG G++GV +RWG  +L
Sbjct: 180 MEIQVNGGSVADKVDFARNLFEKPIEIDSIFEKDEMIDVIAVTKGHGFQGVTSRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT  N K++++GK S E  +A TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSCNHKVFRIGKGSDEG-NASTE 298

Query: 287 FDRSVYLLSSLMGSF 301
           FD S   ++  MG F
Sbjct: 299 FDISKKQITP-MGGF 312


>gi|407929355|gb|EKG22187.1| Ribosomal protein L3 [Macrophomina phaseolina MS6]
          Length = 392

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 205/313 (65%), Positives = 254/313 (81%), Gaps = 16/313 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSL FLPRKRA+RHRGKVK+FPKDDP KP  LTA +GYKAGMT IVRD+
Sbjct: 1   MSHRKFEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTATMGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+KLHKKE  EA T+IETPP++ +GVVGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGAKLHKKEIVEACTVIETPPMIAIGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY K++ +++G K I  +LE++KKYCTV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKQH-SENGGKSITRELERIKKYCTVVRVLAHTQISKTPLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           ME+QVNGGSVA+KVDFA G FEK I + ++F++DEMID+I VTKG G+ GV +RWG  +L
Sbjct: 180 MEVQVNGGSVAEKVDFAQGLFEKPIEVSSIFEQDEMIDVIAVTKGHGFNGVTSRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N KIY++GK  +++ +A TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKIYRIGKG-EDAGNASTE 298

Query: 287 FDRSVYLLSSLMG 299
           FD S   ++ L G
Sbjct: 299 FDVSKKTITPLGG 311


>gi|38454246|ref|NP_942048.1| 60S ribosomal protein L3 [Rattus norvegicus]
 gi|132958|sp|P21531.3|RL3_RAT RecName: Full=60S ribosomal protein L3; AltName: Full=L4
 gi|57698|emb|CAA44095.1| ribosomal protein L3 [Rattus rattus]
 gi|37231753|gb|AAH58494.1| Ribosomal protein L3 [Rattus norvegicus]
 gi|149065896|gb|EDM15769.1| ribosomal protein L3, isoform CRA_b [Rattus norvegicus]
          Length = 403

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 210/319 (65%), Positives = 256/319 (80%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  TV+A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ D GKK ++     MKKYC VIR              KKAHL
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLPLRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQES 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   ++ L G
Sbjct: 301 NNASTDYDLSDKSINPLGG 319


>gi|444723833|gb|ELW64463.1| 60S ribosomal protein L3, partial [Tupaia chinensis]
          Length = 402

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 209/318 (65%), Positives = 256/318 (80%), Gaps = 20/318 (6%)

Query: 2   SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
           SHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V+
Sbjct: 1   SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVD 60

Query: 62  KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
           +PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  T++A+H+++E +RRFYKN
Sbjct: 61  RPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYKN 120

Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLM 167
           W KSKKKAFTKY KK++ DDGKK ++     MKKYC VIR              KKAHLM
Sbjct: 121 WHKSKKKAFTKYCKKWQDDDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHLM 180

Query: 168 EIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 227
           EIQVNGG+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW   +LP
Sbjct: 181 EIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP 240

Query: 228 RKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQESH 281
           RKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           +
Sbjct: 241 RKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKN 300

Query: 282 SAMTEFDRSVYLLSSLMG 299
           +A T++D S   ++ L G
Sbjct: 301 NASTDYDLSDKSINPLGG 318


>gi|119190755|ref|XP_001245984.1| 60S ribosomal protein L3 [Coccidioides immitis RS]
 gi|303315241|ref|XP_003067628.1| 60S ribosomal protein L3 [Coccidioides posadasii C735 delta SOWgp]
 gi|240107298|gb|EER25483.1| 60S ribosomal protein L3, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|320035569|gb|EFW17510.1| 60S ribosomal protein L3 [Coccidioides posadasii str. Silveira]
 gi|392868822|gb|EAS34621.2| 60S ribosomal protein L3 [Coccidioides immitis RS]
          Length = 392

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 207/315 (65%), Positives = 253/315 (80%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSL FLPRKR++RHRGKVK+FPKDDP KP  LTA +GYKAGMT  VRD+
Sbjct: 1   MSHRKYEAPRHGSLAFLPRKRSARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTTVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+K+HKKE  EAVTIIETPP++ VG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGAKMHKKEIVEAVTIIETPPMIAVGIVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY K Y  + G   +  +LE++KKYCTV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKSYSENKG-ASVTRELERIKKYCTVVRLLAHTQIRKTPLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGSV +KVDFA+G FEK I ID+VF++DEMID+I VTKG G++GV +RWG  +L
Sbjct: 180 MEIQVNGGSVPEKVDFAHGLFEKPIEIDSVFEQDEMIDVIAVTKGHGFQGVTSRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP+ V +TVARAGQ+GYHHRT +N KIY++GK S E  +A T+
Sbjct: 240 PRKTHKGLRKVACIGAWHPSHVQWTVARAGQDGYHHRTSVNHKIYRIGKGSDEG-NASTD 298

Query: 287 FDRSVYLLSSLMGSF 301
           FD S   ++  MG F
Sbjct: 299 FDVSKKQITP-MGGF 312


>gi|343424921|emb|CBQ68459.1| probable RPL3-60s ribosomal protein l3 [Sporisorium reilianum SRZ2]
          Length = 391

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 206/313 (65%), Positives = 250/313 (79%), Gaps = 16/313 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSH KFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDP KP  LTA +GYKAGMTHIVRD+
Sbjct: 1   MSHCKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPKKPVHLTAMIGYKAGMTHIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HKKE  EAVT+IETPP+V VGVVGYV+TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGSKMHKKEIVEAVTVIETPPMVAVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW +SKKKAFT+Y KK+   +G   I  +LE++KKYCTV+R              KKAHL
Sbjct: 121 NWYRSKKKAFTRYAKKHSESNG-ASISRELERIKKYCTVVRVLAHTQVRKTGLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           ME+Q+NGGSVA+KVDFA   FEK   + +VF+++E+ID+I VTKG GYEGV  RWG  +L
Sbjct: 180 MEVQINGGSVAEKVDFAKEHFEKTFDVKSVFEQNEIIDVIAVTKGHGYEGVTARWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRK+ACIGAWHPA V FTVAR+GQ+GYHHRTE+ KKIY++     ++ S  T+
Sbjct: 240 PRKTHRGLRKIACIGAWHPANVMFTVARSGQDGYHHRTEIGKKIYRIANGDDKT-SGSTD 298

Query: 287 FDRSVYLLSSLMG 299
           FD +   ++ L G
Sbjct: 299 FDTTEKTITPLGG 311


>gi|336373266|gb|EGO01604.1| hypothetical protein SERLA73DRAFT_132009 [Serpula lacrymans var.
           lacrymans S7.3]
 gi|336386114|gb|EGO27260.1| 60S ribosomal protein L3 [Serpula lacrymans var. lacrymans S7.9]
          Length = 388

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 204/315 (64%), Positives = 256/315 (81%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSLGFLPRKRA+RHRGKVK+FP+DDP KP  LTA +GYKAGMTH+VRD+
Sbjct: 1   MSHRKYEAPRHGSLGFLPRKRAARHRGKVKSFPRDDPKKPVHLTATMGYKAGMTHVVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  EAVTI+ETPPL+VVGVVGYV+TPRGLR+L TVWA HL++EV+RRFYK
Sbjct: 61  DRPGSKMHKREVVEAVTIVETPPLIVVGVVGYVETPRGLRTLTTVWASHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW +SKKKAFT+Y KK+  D+GK   + +LE+++KYCTV+R              KKAHL
Sbjct: 121 NWYRSKKKAFTRYAKKHAEDNGKSTAR-ELERIRKYCTVVRVLAHTQIRKTGLSQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGS+A KV+F++  FEK + + +VF++DE ID+I VTKG G+EGV  RWG  +L
Sbjct: 180 MEIQVNGGSIADKVEFSHNLFEKPVEVTSVFEQDENIDVIAVTKGHGFEGVTHRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE+NKKIY++G A  +  +A TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTELNKKIYRIG-AGTDDGNASTE 298

Query: 287 FDRSVYLLSSLMGSF 301
            D +   ++  MG F
Sbjct: 299 SDITKKAITP-MGGF 312


>gi|296236921|ref|XP_002763538.1| PREDICTED: 60S ribosomal protein L3 isoform 1 [Callithrix jacchus]
          Length = 403

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 209/319 (65%), Positives = 257/319 (80%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  TV+A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ +DGKK ++     MKKYC VIR              KKAHL
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+V++K+D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQVNGGTVSEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQES 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   ++ L G
Sbjct: 301 NNASTDYDLSDKSINPLGG 319


>gi|356461025|ref|NP_001239088.1| 60S ribosomal protein L3 [Canis lupus familiaris]
          Length = 403

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 209/319 (65%), Positives = 256/319 (80%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  T++A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ DDGKK ++     MKKYC VIR              KKAHL
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDDGKKQLEKDFNSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQES 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   ++ L G
Sbjct: 301 NNASTDYDLSDKSINPLGG 319


>gi|14250148|gb|AAH08492.1| Ribosomal protein L3 [Homo sapiens]
          Length = 403

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 204/290 (70%), Positives = 245/290 (84%), Gaps = 14/290 (4%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  TV+A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ +DGKK ++     MKKYC VIR              KKAHL
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA 276
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+ 
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290


>gi|301757551|ref|XP_002914602.1| PREDICTED: 60S ribosomal protein L3-like [Ailuropoda melanoleuca]
          Length = 403

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 209/319 (65%), Positives = 256/319 (80%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  T++A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ DDGKK ++     MKKYC VIR              KKAHL
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDDGKKQLEKDFNSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQES 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKVGQGYLIKDGKLIK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   ++ L G
Sbjct: 301 NNASTDYDLSDKSINPLGG 319


>gi|327239268|gb|AEA39501.1| ribosomal protein L3 [Ailuropoda melanoleuca]
 gi|327239370|gb|AEA39552.1| ribosomal protein L3 [Ailuropoda melanoleuca]
          Length = 403

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 209/319 (65%), Positives = 256/319 (80%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  T++A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ DDGKK ++     MKKYC VIR              KKAHL
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDDGKKQLEKDFNSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQES 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKVGQGYLIKDGKLIK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   ++ L G
Sbjct: 301 NNASTDYDLSDKSINPLGG 319


>gi|71001672|ref|XP_755517.1| 60S ribosomal protein L3 [Aspergillus fumigatus Af293]
 gi|83305621|sp|Q8NKF4.2|RL3_ASPFU RecName: Full=60S ribosomal protein L3; AltName: Allergen=Asp f 23
 gi|66853155|gb|EAL93479.1| 60S ribosomal protein L3 [Aspergillus fumigatus Af293]
 gi|159129584|gb|EDP54698.1| 60S ribosomal protein L3 [Aspergillus fumigatus A1163]
          Length = 392

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 210/315 (66%), Positives = 252/315 (80%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSL FLPRKRA+RHRGKVK+FPKDDP KP  LTA +GYKAGMT +VRD+
Sbjct: 1   MSHRKYEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTASMGYKAGMTTVVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+K+HKKE  EAVTIIETPPLV VGVVGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGAKMHKKEIVEAVTIIETPPLVAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK+  ++G   I  +LE++KKYCTV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKKHAEENG-ASITRELERIKKYCTVVRVLAHTQIRKTPLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGSVA KVDFA   FEK I ID++F+KDEMID+I VTKG G++GV +RWG  +L
Sbjct: 180 MEIQVNGGSVADKVDFARNLFEKPIEIDSIFEKDEMIDVIAVTKGHGFQGVTSRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT  N K++++GK S E  +A T+
Sbjct: 240 PRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSCNHKVFRIGKGSDEG-NASTD 298

Query: 287 FDRSVYLLSSLMGSF 301
           FD S   ++  MG F
Sbjct: 299 FDISKKQITP-MGGF 312


>gi|388855824|emb|CCF50608.1| probable RPL3-60s ribosomal protein l3 [Ustilago hordei]
          Length = 391

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 205/313 (65%), Positives = 250/313 (79%), Gaps = 16/313 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSH KFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDP KP  LTA +GYKAGMTHIVRD+
Sbjct: 1   MSHCKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPKKPVHLTAMIGYKAGMTHIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HKKE  EAVT++ETPP+V VGVVGYV+TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGSKMHKKEIVEAVTVVETPPMVAVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW +SKKKAFTKY KK+  ++G   I  +LE++KKYCTV+R              KKAHL
Sbjct: 121 NWYRSKKKAFTKYAKKHSENNG-ASISRELERIKKYCTVVRLLAHTQVRKTGLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           ME+Q+NGGSVA KVDFA   FEK   + +VF+++E++D+I VTKG GYEGV  RWG  +L
Sbjct: 180 MEVQINGGSVADKVDFAKEHFEKTFDVKSVFEQNEIVDVIAVTKGHGYEGVTARWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRK+ACIGAWHPA V FTVAR+GQ+GYHHRTE+ KKIY++     ++ S  T+
Sbjct: 240 PRKTHRGLRKIACIGAWHPANVMFTVARSGQDGYHHRTEIGKKIYRIANGDDKT-SGSTD 298

Query: 287 FDRSVYLLSSLMG 299
           FD +   ++ L G
Sbjct: 299 FDTTEKNITPLGG 311


>gi|452988462|gb|EME88217.1| hypothetical protein MYCFIDRAFT_209740 [Pseudocercospora fijiensis
           CIRAD86]
          Length = 392

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 206/315 (65%), Positives = 254/315 (80%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSL FLPRKRASRHRGKVK+FPKDDP KP  LTA +GYKAGM+ IVRD+
Sbjct: 1   MSHRKFEAPRHGSLAFLPRKRASRHRGKVKSFPKDDPKKPVHLTAAMGYKAGMSTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+KLHKKE  EAVT+IETPP++V+G+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGAKLHKKEIVEAVTVIETPPMMVIGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK+  + G K+I   LE++KKYCTV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKKHSEESG-KNITRDLERIKKYCTVVRVLAHTQISKTPLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGS+A KV+F +G FEK + ID++F++DEMID I VTKG G++GV +RWG  +L
Sbjct: 180 MEIQVNGGSIADKVEFGHGLFEKPVEIDSIFEQDEMIDCIAVTKGHGFQGVTSRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++GK S +  +A T+
Sbjct: 240 PRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKVYRIGKGSDDG-NATTD 298

Query: 287 FDRSVYLLSSLMGSF 301
           FD S   ++  MG F
Sbjct: 299 FDHSKKQITP-MGGF 312


>gi|395753420|ref|XP_002831202.2| PREDICTED: 60S ribosomal protein L3 [Pongo abelii]
          Length = 418

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 209/318 (65%), Positives = 256/318 (80%), Gaps = 20/318 (6%)

Query: 2   SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
           SHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V+
Sbjct: 17  SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVD 76

Query: 62  KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
           +PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  TV+A+H+++E +RRFYKN
Sbjct: 77  RPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKN 136

Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLM 167
           W KSKKKAFTKY KK++ +DGKK ++     MKKYC VIR              KKAHLM
Sbjct: 137 WHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHLM 196

Query: 168 EIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 227
           EIQVNGG+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW   +LP
Sbjct: 197 EIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP 256

Query: 228 RKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQESH 281
           RKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           +
Sbjct: 257 RKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKN 316

Query: 282 SAMTEFDRSVYLLSSLMG 299
           +A T++D S   ++ L G
Sbjct: 317 NASTDYDLSDKSINPLGG 334


>gi|354494770|ref|XP_003509508.1| PREDICTED: 60S ribosomal protein L3-like [Cricetulus griseus]
 gi|344245574|gb|EGW01678.1| 60S ribosomal protein L3 [Cricetulus griseus]
          Length = 403

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 210/319 (65%), Positives = 256/319 (80%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  TV+A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ D GKK ++     MKKYC VIR              KKAHL
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDMGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLPLRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQES 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   ++ L G
Sbjct: 301 NNASTDYDLSDKSINPLGG 319


>gi|302412909|ref|XP_003004287.1| 60S ribosomal protein L3 [Verticillium albo-atrum VaMs.102]
 gi|261356863|gb|EEY19291.1| 60S ribosomal protein L3 [Verticillium albo-atrum VaMs.102]
          Length = 391

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 203/313 (64%), Positives = 251/313 (80%), Gaps = 16/313 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSL +LPRKRA+RHRGKVK+FPKDDP KP  LTA +GYKAGMT IVRD+
Sbjct: 1   MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTATMGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+K HKKE  EAV+II+TPP+VVVG+VGY++TPRGLRSL TVWA+HL++EVRRRFY+
Sbjct: 61  DRPGAKAHKKEVVEAVSIIDTPPMVVVGLVGYIETPRGLRSLATVWAEHLSDEVRRRFYR 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK+    G   I  ++E++KKYC+V+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKKHSESSG-ASITREIERIKKYCSVVRVLAHTQIRKTPLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGSVA KVDF YG FEK++ +D++F++DEMID+I VTKGKG+ GV +RWG  +L
Sbjct: 180 MEIQVNGGSVADKVDFGYGLFEKEVSVDSIFEQDEMIDVIAVTKGKGFNGVTSRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++ KA  E  SA TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKVYRIAKAGAED-SASTE 298

Query: 287 FDRSVYLLSSLMG 299
            D +  +++ L G
Sbjct: 299 LDVTKKVITPLGG 311


>gi|119580719|gb|EAW60315.1| ribosomal protein L3, isoform CRA_f [Homo sapiens]
          Length = 430

 Score =  434 bits (1115), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 209/318 (65%), Positives = 256/318 (80%), Gaps = 20/318 (6%)

Query: 2   SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
           SHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V+
Sbjct: 29  SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVD 88

Query: 62  KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
           +PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  TV+A+H+++E +RRFYKN
Sbjct: 89  RPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKN 148

Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLM 167
           W KSKKKAFTKY KK++ +DGKK ++     MKKYC VIR              KKAHLM
Sbjct: 149 WHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHLM 208

Query: 168 EIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 227
           EIQVNGG+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW   +LP
Sbjct: 209 EIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP 268

Query: 228 RKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQESH 281
           RKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           +
Sbjct: 269 RKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKN 328

Query: 282 SAMTEFDRSVYLLSSLMG 299
           +A T++D S   ++ L G
Sbjct: 329 NASTDYDLSDKSINPLGG 346


>gi|255636886|gb|ACU18776.1| unknown [Glycine max]
          Length = 257

 Score =  434 bits (1115), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 219/257 (85%), Positives = 236/257 (91%), Gaps = 15/257 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKD+PS+PC LTAF+GYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDNPSQPCGLTAFVGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLR+L TVWAQHL+EEV+RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRTLNTVWAQHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NWCKSKKKAFTKY+KKYET++GKKDI++QLEK+KKY TVIR               KKAH
Sbjct: 121 NWCKSKKKAFTKYSKKYETEEGKKDIESQLEKLKKYATVIRVLAHTQIRKLKGLKQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQVNGG+V QKVD+AY FFEKQIP+DAVF KDEMIDI+GVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTVDQKVDYAYSFFEKQIPVDAVFHKDEMIDIVGVTKGKGYEGVVTRWGVTR 240

Query: 226 LPRKTHRGLRKVACIGA 242
           LPRKTHRGLRKVACIGA
Sbjct: 241 LPRKTHRGLRKVACIGA 257


>gi|348569536|ref|XP_003470554.1| PREDICTED: 60S ribosomal protein L3-like [Cavia porcellus]
          Length = 403

 Score =  434 bits (1115), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 212/319 (66%), Positives = 254/319 (79%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPIHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLRS  TV+A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRSFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ D GKK +      MKKYC VIR              KKAHL
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDMGKKQLDKDFSSMKKYCQVIRIIAHTQMRLLPLRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+VA+K+D+A    E+QIP+  VF +DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQVNGGTVAEKLDWAREKLEQQIPVSQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQES 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   ++ L G
Sbjct: 301 NNASTDYDLSDKSINPLGG 319


>gi|402217655|gb|EJT97735.1| 60S ribosomal protein L3 [Dacryopinax sp. DJM-731 SS1]
          Length = 395

 Score =  434 bits (1115), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 206/315 (65%), Positives = 254/315 (80%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHG+LGFLPRKRA+RHRGKVK+FPKDDP K   LTA + YKAGMTH+VRD+
Sbjct: 1   MSHRKYEAPRHGNLGFLPRKRAARHRGKVKSFPKDDPKKKPHLTAAMAYKAGMTHVVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  EAVTI+ETPP++VVGVVGYV+TPRGLRSL TVWA HL++E++RRFYK
Sbjct: 61  DRPGSKMHKREVVEAVTILETPPMIVVGVVGYVETPRGLRSLTTVWASHLSDELKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFT+Y KK+  ++G K I  +LE+++KYCTV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTRYAKKH-AENGGKSIARELERIRKYCTVVRVLAHTQLSKTGLRQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGSV +KVDFA G FEK + I  +F++DE +D+I VTKG G+EGV  RWG  RL
Sbjct: 180 MEIQVNGGSVGEKVDFAKGLFEKPVEISTIFEQDECVDVIAVTKGHGFEGVTHRWGTKRL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE+NKKIY++G  + ES +A TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTELNKKIYRIGSGADES-NASTE 298

Query: 287 FDRSVYLLSSLMGSF 301
            D +   ++  MG F
Sbjct: 299 ADTTKKTITP-MGGF 312


>gi|403282966|ref|XP_003932901.1| PREDICTED: 60S ribosomal protein L3 [Saimiri boliviensis
           boliviensis]
          Length = 403

 Score =  434 bits (1115), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 208/319 (65%), Positives = 257/319 (80%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  TV+A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ +DGK+ ++     MKKYC VIR              KKAHL
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKRQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+V++K+D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQVNGGTVSEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQES 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   ++ L G
Sbjct: 301 NNASTDYDLSDKSINPLGG 319


>gi|449271919|gb|EMC82093.1| 60S ribosomal protein L3 [Columba livia]
          Length = 409

 Score =  434 bits (1115), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 209/318 (65%), Positives = 255/318 (80%), Gaps = 20/318 (6%)

Query: 2   SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
           SHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V+
Sbjct: 8   SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVD 67

Query: 62  KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
           +PGSK++KKE  EAVTIIETPP+V+VG+VGYVKTP GLRS  T++A+H+++E +RRFYKN
Sbjct: 68  RPGSKVNKKEVVEAVTIIETPPMVIVGIVGYVKTPHGLRSFKTIFAEHISDECKRRFYKN 127

Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLM 167
           W KSKKKAFTKY KK++ ++GKK ++     MKKYC VIR              KK+HLM
Sbjct: 128 WHKSKKKAFTKYCKKWQDEEGKKQLEKDFNSMKKYCQVIRVMAHTQMRLLPLRQKKSHLM 187

Query: 168 EIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 227
           EIQVNGG+VA+KVD+A    E+Q+P+  VF +DEMID+IGVTKGKGY+GV +RW   +LP
Sbjct: 188 EIQVNGGTVAEKVDWAREKLEQQVPVSTVFAQDEMIDVIGVTKGKGYKGVTSRWHTKKLP 247

Query: 228 RKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ------ESH 281
           RKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+  Q        +
Sbjct: 248 RKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYQIKDGKLIKN 307

Query: 282 SAMTEFDRSVYLLSSLMG 299
           +A T++D S   ++ L G
Sbjct: 308 NASTDYDLSDKSINPLGG 325


>gi|346972435|gb|EGY15887.1| 60S ribosomal protein L3 [Verticillium dahliae VdLs.17]
          Length = 391

 Score =  434 bits (1115), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 203/313 (64%), Positives = 250/313 (79%), Gaps = 16/313 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSL +LPRKRA+RHRGKVK+FPKDDP KP  LTA +GYKAGMT IVRD+
Sbjct: 1   MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTATMGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+K HKKE  EAV+II+TPP+VVVG+VGY++TPRGLRSL TVWA+HL++EVRRRFY+
Sbjct: 61  DRPGAKAHKKEVVEAVSIIDTPPMVVVGIVGYIETPRGLRSLTTVWAEHLSDEVRRRFYR 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK+    G   I  ++E++KKYC+V+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKKHSESSG-ASITREIERIKKYCSVVRVLAHTQIRKTPLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGSVA KVDF YG FEK++ +D +F++DEMID+I VTKGKG+ GV +RWG  +L
Sbjct: 180 MEIQVNGGSVADKVDFGYGLFEKEVSVDTIFEQDEMIDVIAVTKGKGFNGVTSRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++ KA  E  SA TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKVYRIAKAGAED-SASTE 298

Query: 287 FDRSVYLLSSLMG 299
            D +  +++ L G
Sbjct: 299 LDVTKKVITPLGG 311


>gi|332858660|ref|XP_001150138.2| PREDICTED: 60S ribosomal protein L3-like isoform 1 [Pan
           troglodytes]
          Length = 395

 Score =  433 bits (1114), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 209/319 (65%), Positives = 257/319 (80%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  TV+A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVI--------------RKKAHL 166
           NW KSKKKAFTKY KK++ +DGKK ++     MKKYC VI              +KKAHL
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIHVIAHTQMRLLPLRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQVNGGTVAKKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQES 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   ++ L G
Sbjct: 301 NNASTDYDLSDKSINPLGG 319


>gi|52741|emb|CAA68370.1| J1 protein [Mus musculus]
 gi|226725|prf||1604248A J1 protein
          Length = 403

 Score =  433 bits (1113), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 210/319 (65%), Positives = 255/319 (79%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  TV+A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ D GKK ++     MKKYC VIR              KKAHL
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLPLRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQES 280
           PRKTHRGLRKVACIGAWHPARV+FTVARAGQ GYHHRTE+NKKIYK+G+           
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFTVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   ++ L G
Sbjct: 301 NNASTDYDLSDKSINPLGG 319


>gi|312088746|ref|XP_003145979.1| 60S ribosomal protein L3 [Loa loa]
 gi|307758859|gb|EFO18093.1| 60S ribosomal protein L3 [Loa loa]
          Length = 386

 Score =  433 bits (1113), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 196/280 (70%), Positives = 242/280 (86%), Gaps = 4/280 (1%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP  LTAF+G+KAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSMGFTPKKRSKRHRGKVKAFPKDDPSKPIHLTAFMGFKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           +KPGSK++KKE  EAVT++ETPP+++VGVVGY+ TPRG R   TVWA+HL+E+ RRRFYK
Sbjct: 61  DKPGSKVNKKEVVEAVTVLETPPMIIVGVVGYIDTPRGPRQFKTVWAEHLSEDCRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR----KKAHLMEIQVNGGSV 176
           NW  SKKKAF K+ KK++ +DG K IQA L KMKKYC++IR     +AH+MEIQVNGG++
Sbjct: 121 NWNSSKKKAFQKHAKKWQDEDGMKSIQADLAKMKKYCSIIRVIAHTQAHIMEIQVNGGTI 180

Query: 177 AQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRK 236
            +KVD+AY  FEKQ+P+D++F +DEMID+IGVTKGKG++GV +RW   +LPRKTH+GLRK
Sbjct: 181 PEKVDWAYEHFEKQVPVDSIFAQDEMIDVIGVTKGKGFKGVTSRWHTKKLPRKTHKGLRK 240

Query: 237 VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA 276
           VACIGAWHP+RV FTVARAGQ GYHHRTE+NKKIY++GK+
Sbjct: 241 VACIGAWHPSRVQFTVARAGQKGYHHRTEVNKKIYRIGKS 280


>gi|212536953|ref|XP_002148632.1| 60S ribosomal protein L3 [Talaromyces marneffei ATCC 18224]
 gi|210068374|gb|EEA22465.1| 60S ribosomal protein L3 [Talaromyces marneffei ATCC 18224]
          Length = 392

 Score =  433 bits (1113), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 205/313 (65%), Positives = 252/313 (80%), Gaps = 16/313 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSL +LPRKRA+RHRGKVK+FPKDDP KP  LTA +GYKAGMT IVRD+
Sbjct: 1   MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTASMGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+K+HKKE  EAVT+IETPPLV VGVVGY++TPRGLRSL TVWA+HL++E++RRFYK
Sbjct: 61  DRPGAKMHKKEVVEAVTVIETPPLVAVGVVGYIETPRGLRSLTTVWAEHLSDELKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFT+YTKK+ T+     +  +LE++KKYCTV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTRYTKKH-TESSAASVTRELERIKKYCTVVRILAHTQIRKTPLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGS+A KV+FA+G FEK I ID +F+++E+ID+I VTKG G+ GV +RWG  +L
Sbjct: 180 MEIQVNGGSIADKVEFAHGLFEKTIDIDTIFEQNEVIDVIAVTKGHGFNGVTSRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N KIY++GK S E  +A TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKIYRIGKGSDEG-NASTE 298

Query: 287 FDRSVYLLSSLMG 299
           FD S   ++ L G
Sbjct: 299 FDVSKKTITPLGG 311


>gi|291389862|ref|XP_002711434.1| PREDICTED: ribosomal protein L3-like [Oryctolagus cuniculus]
          Length = 403

 Score =  432 bits (1111), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 209/319 (65%), Positives = 254/319 (79%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  TV+A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ D GK+ +      MKKYC VIR              KKAHL
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDAGKRQLDKDFSSMKKYCQVIRVLAHTQMRLLPLRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+VA+K+D+A    E+Q+P+  VF +DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVSQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQES 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   ++ L G
Sbjct: 301 NNASTDYDLSDKSINPLGG 319


>gi|74181618|dbj|BAE30074.1| unnamed protein product [Mus musculus]
          Length = 403

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 209/319 (65%), Positives = 255/319 (79%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  TV+A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ D GKK ++     MKKYC VIR              KKAHL
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLPLRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQES 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   ++ L G
Sbjct: 301 NNASTDYDLSDKSINPLGG 319


>gi|74185347|dbj|BAE30149.1| unnamed protein product [Mus musculus]
          Length = 403

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 209/319 (65%), Positives = 256/319 (80%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  TV+A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ D GKK ++   + MKKYC VIR              KKAHL
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFKSMKKYCQVIRIIAHTQMRLLPLRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQES 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   ++ L G
Sbjct: 301 NNASTDYDLSDKSINPLGG 319


>gi|451849886|gb|EMD63189.1| hypothetical protein COCSADRAFT_120340 [Cochliobolus sativus
           ND90Pr]
          Length = 392

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 208/315 (66%), Positives = 252/315 (80%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSL FLPRKRASRHRGKVK+FPKDDP KP  LTA +GYKAGMT IVRD+
Sbjct: 1   MSHRKFEAPRHGSLAFLPRKRASRHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+KLHKKE  EA T+IETPP++ VG+VGY++TPRGLRSL TVWA+HL++EV+RRFY+
Sbjct: 61  DRPGAKLHKKEIVEACTVIETPPMIAVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYR 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK+  ++G + I  +LE++KKYCTV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKKHSENNG-QSITRELERIKKYCTVVRVLAHTQISKTPLQQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGSVA KV+F +G FEK I I +VF+ +EMID+I VTKGKG+ GV +RWG  +L
Sbjct: 180 MEIQVNGGSVADKVEFGHGLFEKPIEITSVFEDNEMIDVIAVTKGKGFNGVTSRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHPA V +TVARAGQ+GYHHRT +N KIY++GK   E  +A T+
Sbjct: 240 PRKTHKGLRKVACIGAWHPAHVQWTVARAGQDGYHHRTSVNHKIYRIGKGDDEG-NASTD 298

Query: 287 FDRSVYLLSSLMGSF 301
           FD S   ++  MG F
Sbjct: 299 FDVSKKRITP-MGGF 312


>gi|149743311|ref|XP_001501957.1| PREDICTED: 60S ribosomal protein L3 [Equus caballus]
          Length = 403

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 207/319 (64%), Positives = 256/319 (80%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  T++A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ +DG+K ++     MKKYC VIR              KKAHL
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGRKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQES 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   ++ L G
Sbjct: 301 NNASTDYDLSDKSINPLGG 319


>gi|255308899|ref|NP_038790.2| 60S ribosomal protein L3 [Mus musculus]
 gi|341942150|sp|P27659.3|RL3_MOUSE RecName: Full=60S ribosomal protein L3; AltName: Full=J1 protein
 gi|16307136|gb|AAH09655.1| Ribosomal protein L3 [Mus musculus]
 gi|26354122|dbj|BAC40691.1| unnamed protein product [Mus musculus]
 gi|53237049|gb|AAH83134.1| Ribosomal protein L3 [Mus musculus]
 gi|62825867|gb|AAH94059.1| Ribosomal protein L3 [Mus musculus]
 gi|74138821|dbj|BAE27217.1| unnamed protein product [Mus musculus]
 gi|74139413|dbj|BAE40848.1| unnamed protein product [Mus musculus]
 gi|74141867|dbj|BAE41003.1| unnamed protein product [Mus musculus]
 gi|74142025|dbj|BAE41075.1| unnamed protein product [Mus musculus]
 gi|74146286|dbj|BAE28917.1| unnamed protein product [Mus musculus]
 gi|74151280|dbj|BAE38773.1| unnamed protein product [Mus musculus]
 gi|74184852|dbj|BAE39049.1| unnamed protein product [Mus musculus]
 gi|74190533|dbj|BAE25922.1| unnamed protein product [Mus musculus]
 gi|74195956|dbj|BAE30536.1| unnamed protein product [Mus musculus]
 gi|74198689|dbj|BAE39818.1| unnamed protein product [Mus musculus]
 gi|74201222|dbj|BAE26078.1| unnamed protein product [Mus musculus]
 gi|74204394|dbj|BAE39950.1| unnamed protein product [Mus musculus]
 gi|74207543|dbj|BAE40022.1| unnamed protein product [Mus musculus]
 gi|74207577|dbj|BAE40037.1| unnamed protein product [Mus musculus]
 gi|74207702|dbj|BAE40095.1| unnamed protein product [Mus musculus]
 gi|74207706|dbj|BAE40097.1| unnamed protein product [Mus musculus]
 gi|74212023|dbj|BAE40178.1| unnamed protein product [Mus musculus]
 gi|74220011|dbj|BAE40585.1| unnamed protein product [Mus musculus]
 gi|74221090|dbj|BAE42051.1| unnamed protein product [Mus musculus]
 gi|148672669|gb|EDL04616.1| mCG11520, isoform CRA_b [Mus musculus]
 gi|187956900|gb|AAI58040.1| Ribosomal protein L3 [Mus musculus]
          Length = 403

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 209/319 (65%), Positives = 255/319 (79%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  TV+A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ D GKK ++     MKKYC VIR              KKAHL
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLPLRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQES 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   ++ L G
Sbjct: 301 NNASTDYDLSDKSINPLGG 319


>gi|453089521|gb|EMF17561.1| 60S ribosomal protein L3 [Mycosphaerella populorum SO2202]
          Length = 392

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 207/315 (65%), Positives = 252/315 (80%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSL FLPRKRA+RHRGKVK+FPKDDP + C LTA +GYKAGMT IVRD+
Sbjct: 1   MSHRKFEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKQKCHLTATMGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+KLHKKE  EA T+IETPP++VVG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGAKLHKKEIVEACTVIETPPIIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK+  + G K I   LE++KKYCTV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKKHAEESG-KSITRDLERIKKYCTVVRVLAHTQISKTPLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGS+A KV+F +G FEK + ID+VF++DEMID I VTKG GY+GV +RWG  +L
Sbjct: 180 MEIQVNGGSIADKVEFGHGLFEKPVEIDSVFEQDEMIDCIAVTKGHGYQGVTSRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++GK S +  +A T+
Sbjct: 240 PRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKVYRIGKGSDDG-NATTD 298

Query: 287 FDRSVYLLSSLMGSF 301
           FD S   ++  MG F
Sbjct: 299 FDHSKKQITP-MGGF 312


>gi|154301761|ref|XP_001551292.1| 60S ribosomal protein L3 [Botryotinia fuckeliana B05.10]
 gi|347828492|emb|CCD44189.1| similar to 60S ribosomal protein l3 [Botryotinia fuckeliana]
          Length = 392

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 207/315 (65%), Positives = 252/315 (80%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSL +LPRKRASRHRGKVK+FPKDD +KP  LTA LGYKAGMT IVRD+
Sbjct: 1   MSHRKFEAPRHGSLAYLPRKRASRHRGKVKSFPKDDKTKPVHLTATLGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+K HKKE  EAVT+IETPP++VVG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGAKTHKKEVVEAVTVIETPPVIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK+  + G   I  +LE++KKYCTV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKKHSENSG-SSITRELERIKKYCTVVRVLAHTQIRKTPLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGSVA+KVDFA G FEK + I ++F++DEMID+I VTKG G+ GV +RWG  +L
Sbjct: 180 MEIQVNGGSVAEKVDFASGLFEKPVEISSIFEQDEMIDVIAVTKGHGFSGVTSRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHPA V +TVARAGQ+GYHHRT  N K+Y++G+   + ++A TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPAHVQWTVARAGQDGYHHRTSCNHKVYRIGRG-DDPNNAATE 298

Query: 287 FDRSVYLLSSLMGSF 301
           FD S   ++  MG F
Sbjct: 299 FDVSKKAITP-MGGF 312


>gi|281351162|gb|EFB26746.1| hypothetical protein PANDA_002530 [Ailuropoda melanoleuca]
          Length = 403

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 208/318 (65%), Positives = 255/318 (80%), Gaps = 20/318 (6%)

Query: 2   SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
           SHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP  LTAFLGYKAGMTHIVR+V+
Sbjct: 2   SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREVD 61

Query: 62  KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
           +PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  T++A+H+++E +RRFYKN
Sbjct: 62  RPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYKN 121

Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLM 167
           W KSKKKAFTKY KK++ DDGKK ++     MKKYC VIR              KKAHLM
Sbjct: 122 WHKSKKKAFTKYCKKWQDDDGKKQLEKDFNSMKKYCQVIRVIAHTQMRLLPLRQKKAHLM 181

Query: 168 EIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 227
           EIQVNGG+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW   +LP
Sbjct: 182 EIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP 241

Query: 228 RKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQESH 281
           RKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           +
Sbjct: 242 RKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKVGQGYLIKDGKLIKN 301

Query: 282 SAMTEFDRSVYLLSSLMG 299
           +A T++D S   ++ L G
Sbjct: 302 NASTDYDLSDKSINPLGG 319


>gi|346227212|ref|NP_001230992.1| ribosomal protein L3 [Sus scrofa]
          Length = 403

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 207/319 (64%), Positives = 256/319 (80%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+V+VG+VGYV+TPRGLR+  T++A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ +DGKK ++     MKKYC VIR              KKAHL
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLERDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQES 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   ++ L G
Sbjct: 301 NNASTDYDLSDKSINPLGG 319


>gi|452001707|gb|EMD94166.1| hypothetical protein COCHEDRAFT_1130499 [Cochliobolus
           heterostrophus C5]
          Length = 392

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 208/315 (66%), Positives = 252/315 (80%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSL FLPRKRASRHRGKVK+FPKDDP KP  LTA +GYKAGMT IVRD+
Sbjct: 1   MSHRKFEAPRHGSLAFLPRKRASRHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+KLHKKE  EA T+IETPP++ VG+VGY++TPRGLRSL TVWA+HL++EV+RRFY+
Sbjct: 61  DRPGAKLHKKEIVEACTVIETPPMIAVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYR 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK+  ++G + I  +LE++KKYCTV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKKHSENNG-QSITRELERIKKYCTVVRVLAHTQISKTPLQQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGSVA KV+F +G FEK I I +VF+ +EMID+I VTKGKG+ GV +RWG  +L
Sbjct: 180 MEIQVNGGSVADKVEFGHGLFEKPIEITSVFEDNEMIDVIAVTKGKGFNGVTSRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHPA V +TVARAGQ+GYHHRT +N KIY++GK   E  +A T+
Sbjct: 240 PRKTHKGLRKVACIGAWHPAHVQWTVARAGQDGYHHRTSVNHKIYRIGKGDDEG-NASTD 298

Query: 287 FDRSVYLLSSLMGSF 301
           FD S   ++  MG F
Sbjct: 299 FDVSKKRITP-MGGF 312


>gi|301093682|ref|XP_002997686.1| 60S ribosomal protein L3 [Phytophthora infestans T30-4]
 gi|262109935|gb|EEY67987.1| 60S ribosomal protein L3 [Phytophthora infestans T30-4]
          Length = 389

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 208/313 (66%), Positives = 252/313 (80%), Gaps = 17/313 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           M HRKFE PRHG LGFLP+KR   HRG+V+ FP+DD SK   LTAF+G+KAGMTHIVR+V
Sbjct: 1   MGHRKFEAPRHGHLGFLPKKRTKHHRGRVRKFPRDDASKAPHLTAFMGFKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HKKE  E V+I+ETPP+VV+GVVGY++TPRGLR+L TV+A+HL+EEV+RRFYK
Sbjct: 61  DRPGSKVHKKEIVEPVSIVETPPMVVIGVVGYLETPRGLRTLTTVFAEHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSK+KAFTKY KKY+T     DI+ +L ++KKYC V+R              KKAHL
Sbjct: 121 NWYKSKRKAFTKYAKKYQTAPA--DIENELNRIKKYCQVVRVLAHTQVRKVKLRQKKAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           +E+QVNGGSVA KVDFA   FEKQ+P+ AVF KDEMID+IGVTKG G EGV+TRWGVTRL
Sbjct: 179 LEVQVNGGSVADKVDFAKSLFEKQVPVTAVFAKDEMIDVIGVTKGHGVEGVITRWGVTRL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHP+RV FTV RAGQ+GYHHRTE+NKKIY++G A+ +  S MTE
Sbjct: 239 PRKTHRGLRKVACIGAWHPSRVRFTVPRAGQHGYHHRTEINKKIYRVG-AAGDKKSCMTE 297

Query: 287 FDRSVYLLSSLMG 299
            D +   ++ L G
Sbjct: 298 QDLTEKDITPLGG 310


>gi|74191638|dbj|BAE30390.1| unnamed protein product [Mus musculus]
 gi|74198856|dbj|BAE30653.1| unnamed protein product [Mus musculus]
          Length = 403

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 209/319 (65%), Positives = 255/319 (79%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  TV+A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ D GKK ++     MKKYC VIR              KKAHL
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLPLRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQES 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   ++ L G
Sbjct: 301 NNASTDYDLSDKSINPLGG 319


>gi|170111497|ref|XP_001886952.1| 60S ribosomal protein L3 [Laccaria bicolor S238N-H82]
 gi|164637995|gb|EDR02275.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 388

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 200/315 (63%), Positives = 254/315 (80%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSLGFLPRKRA+RHRGKVK+FPKDDP KP  LTA +GYKAGMTH+VRD+
Sbjct: 1   MSHRKYEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAVMGYKAGMTHVVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  EAVT+IETPP++VVG+VGYV+TPRGLR+L TVWA HL++E++RRFYK
Sbjct: 61  DRPGSKMHKREVVEAVTVIETPPMIVVGLVGYVETPRGLRTLTTVWASHLSDEIKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW +SKKKAFT+Y KK+  +DG K +  +LE+++KYCTV+R              KKAHL
Sbjct: 121 NWYRSKKKAFTRYAKKH-AEDGGKSVARELERIRKYCTVVRVLAHTQIRKTGLSQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGGS+A KV+F    FEK + +  VF++DE +D+I VTKG G+EGV  RWG  +L
Sbjct: 180 MEIQLNGGSIADKVEFGQALFEKPVEVSTVFEQDECVDVIAVTKGHGFEGVTHRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE+NKKIY++G  + E+ +A TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTELNKKIYRIGSGTDEA-NASTE 298

Query: 287 FDRSVYLLSSLMGSF 301
            D +   ++  MG F
Sbjct: 299 SDITNKSITP-MGGF 312


>gi|321263851|ref|XP_003196643.1| large subunit ribosomal protein L3 [Cryptococcus gattii WM276]
 gi|317463120|gb|ADV24856.1| Large subunit ribosomal protein L3, putative [Cryptococcus gattii
           WM276]
          Length = 390

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 205/302 (67%), Positives = 241/302 (79%), Gaps = 16/302 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSL FLP+KRA+RHRG+ KAFPKDDP KP  LTA +GYKAGMTHIVRD+
Sbjct: 1   MSHRKYEEPRHGSLAFLPKKRAARHRGRCKAFPKDDPKKPVHLTAVMGYKAGMTHIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  EAVT+IETPP+VVVG VGYV+TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGSKMHKREVVEAVTVIETPPMVVVGAVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW +SKKKAFT+Y KK+  + G   +  +LE++KKYCTV+R              KKAHL
Sbjct: 121 NWYRSKKKAFTRYAKKHSENSG-ASVARELERIKKYCTVVRVLAHTQISKTGLQQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGSVA KVDFA   FEK + + +VF++DE IDIIGVTKG GYEGV  RWG TRL
Sbjct: 180 MEIQVNGGSVADKVDFARSHFEKTVEVGSVFEQDECIDIIGVTKGHGYEGVTARWGTTRL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHP+ V F+VARAGQ GYH RT MN KIY++   +  S S  TE
Sbjct: 240 PRKTHRGLRKVACIGAWHPSNVMFSVARAGQRGYHSRTSMNHKIYRIANGASGS-SGSTE 298

Query: 287 FD 288
           FD
Sbjct: 299 FD 300


>gi|169774881|ref|XP_001821908.1| 60S ribosomal protein L3 [Aspergillus oryzae RIB40]
 gi|238496503|ref|XP_002379487.1| 60S ribosomal protein L3 [Aspergillus flavus NRRL3357]
 gi|83769771|dbj|BAE59906.1| unnamed protein product [Aspergillus oryzae RIB40]
 gi|220694367|gb|EED50711.1| 60S ribosomal protein L3 [Aspergillus flavus NRRL3357]
 gi|391868765|gb|EIT77974.1| 60S ribosomal protein [Aspergillus oryzae 3.042]
          Length = 392

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 206/315 (65%), Positives = 252/315 (80%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSL +LPRKRA+RHRGKVK+FPKDDP KP  LTA +GYKAGMT +VRD+
Sbjct: 1   MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTASMGYKAGMTTVVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+K+HKKE  EAVT+IETPPLV +GVVGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGAKMHKKEVVEAVTVIETPPLVAIGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY K++  + G   I  +LE++KKYCTV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKQHAEESG-ASITRELERIKKYCTVVRVLAHTQIRKTPLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGSVA KVDFA   FEK I ID++F+KDE+ID+I VTKG G++GV +RWG  +L
Sbjct: 180 MEIQVNGGSVADKVDFARNLFEKTIEIDSIFEKDEVIDVIAVTKGHGFQGVTSRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT  N K+Y++GK S E+ +A T+
Sbjct: 240 PRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSCNHKVYRIGKGSDEA-NASTD 298

Query: 287 FDRSVYLLSSLMGSF 301
           FD S   ++  MG F
Sbjct: 299 FDISKKQITP-MGGF 312


>gi|119580717|gb|EAW60313.1| ribosomal protein L3, isoform CRA_d [Homo sapiens]
          Length = 429

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 209/318 (65%), Positives = 256/318 (80%), Gaps = 20/318 (6%)

Query: 2   SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
           SHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V+
Sbjct: 28  SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVD 87

Query: 62  KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
           +PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  TV+A+H+++E +RRFYKN
Sbjct: 88  RPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKN 147

Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLM 167
           W KSKKKAFTKY KK++ +DGKK ++     MKKYC VIR              KKAHLM
Sbjct: 148 WHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHLM 207

Query: 168 EIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 227
           EIQVNGG+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW   +LP
Sbjct: 208 EIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP 267

Query: 228 RKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQESH 281
           RKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           +
Sbjct: 268 RKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKN 327

Query: 282 SAMTEFDRSVYLLSSLMG 299
           +A T++D S   ++ L G
Sbjct: 328 NASTDYDLSDKSINPLGG 345


>gi|367054940|ref|XP_003657848.1| 60S ribosomal protein L3 [Thielavia terrestris NRRL 8126]
 gi|347005114|gb|AEO71512.1| hypothetical protein THITE_2123969 [Thielavia terrestris NRRL 8126]
          Length = 392

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 206/315 (65%), Positives = 250/315 (79%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSL FLPRKRA+RHRGKVK+FPKDDP KP  LTA +GYKAGMT IVRD+
Sbjct: 1   MSHRKYEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+K HKKE  EAVTII+TPP++VVG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGAKAHKKEIVEAVTIIDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK+  ++G   I  +LE++KKYCTV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKKHSENNG-ASITRELERIKKYCTVVRVLAHTQIRKTPLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGGSVA KVDF YG FEK + ID +F+KDEMID+I VTKG G+ GV  RWG  +L
Sbjct: 180 MEIQINGGSVADKVDFGYGLFEKPVSIDTIFEKDEMIDVIAVTKGHGFVGVTARWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N KIY++GK   + ++A TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKIYRIGKGDADDNAA-TE 298

Query: 287 FDRSVYLLSSLMGSF 301
            D +   ++  MG F
Sbjct: 299 VDVTKKKITP-MGGF 312


>gi|452819751|gb|EME26804.1| 60S ribosomal protein L3 isoform 2 [Galdieria sulphuraria]
 gi|452819752|gb|EME26805.1| 60S ribosomal protein L3 isoform 1 [Galdieria sulphuraria]
          Length = 388

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 219/314 (69%), Positives = 252/314 (80%), Gaps = 18/314 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSLGFLPRKRA R RG++KAFPKDD SKPC LT FL YKAGMTH+VRDV
Sbjct: 1   MSHRKFERPRHGSLGFLPRKRARRQRGRIKAFPKDDSSKPCHLTGFLSYKAGMTHVVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           +KPGSKLHKKE  EAVTI+E PP+VVVG+VGY++TPRGLRSL TVWA+HL++E +RRFYK
Sbjct: 61  DKPGSKLHKKEVVEAVTILEAPPMVVVGIVGYIETPRGLRSLKTVWAEHLSDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTK-KYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAH 165
           NW KSKKKAFTKY K KYE   G + I+  LEKMKKYC+VIR              KKAH
Sbjct: 121 NWYKSKKKAFTKYAKVKYE--QGGEAIKRDLEKMKKYCSVIRVLVHTQMRKLNIGQKKAH 178

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           + EIQVNGG+VA+KVDFA G FEK + +D VF KDEMID IGVTKGKG+EGV+ RWGVTR
Sbjct: 179 IAEIQVNGGTVAEKVDFATGLFEKTVSVDQVFSKDEMIDAIGVTKGKGFEGVIHRWGVTR 238

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKVACIGAWHPAR+ F+V RAGQNGYHHRT+MN KIY++ K +    S  T
Sbjct: 239 LPRKTHRGLRKVACIGAWHPARIQFSVPRAGQNGYHHRTQMNLKIYRIAKGNNLK-SGST 297

Query: 286 EFDRSVYLLSSLMG 299
           EFD +   ++ + G
Sbjct: 298 EFDLTEKAITPIGG 311


>gi|156065829|ref|XP_001598836.1| 60S ribosomal protein L3 [Sclerotinia sclerotiorum 1980 UF-70]
 gi|154691784|gb|EDN91522.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 392

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 207/315 (65%), Positives = 252/315 (80%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSL +LPRKRASRHRGKVK+FPKDD +KP  LTA LGYKAGMT IVRD+
Sbjct: 1   MSHRKFEAPRHGSLAYLPRKRASRHRGKVKSFPKDDKTKPVHLTATLGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+K HKKE  EAVT+IETPP++VVG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGAKTHKKEVVEAVTVIETPPVIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK+  + G   I  +LE++KKYCTV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKKHSENSG-SSITRELERIKKYCTVVRVLAHTQIRKTPLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGSVA+KVDFA G FEK + I ++F++DEMID+I VTKG G+ GV +RWG  +L
Sbjct: 180 MEIQVNGGSVAEKVDFASGLFEKPVEIGSIFEQDEMIDVIAVTKGHGFSGVTSRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHPA V +TVARAGQ+GYHHRT  N K+Y++G+   + ++A TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPAHVQWTVARAGQDGYHHRTSCNHKVYRIGRG-DDPNNAATE 298

Query: 287 FDRSVYLLSSLMGSF 301
           FD S   ++  MG F
Sbjct: 299 FDVSKKAITP-MGGF 312


>gi|58260576|ref|XP_567698.1| large subunit ribosomal protein L3 [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|134117057|ref|XP_772755.1| 60S ribosomal protein L3 [Cryptococcus neoformans var. neoformans
           B-3501A]
 gi|50255373|gb|EAL18108.1| hypothetical protein CNBK1290 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229779|gb|AAW46181.1| large subunit ribosomal protein L3, putative [Cryptococcus
           neoformans var. neoformans JEC21]
          Length = 390

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 205/302 (67%), Positives = 241/302 (79%), Gaps = 16/302 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSL FLP+KRA+RHRG+ KAFPKDDP KP  LTA +GYKAGMTHIVRD+
Sbjct: 1   MSHRKYEEPRHGSLAFLPKKRAARHRGRCKAFPKDDPKKPVHLTAVMGYKAGMTHIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  EAVT+IETPP+VVVG VGYV+TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGSKMHKREVVEAVTVIETPPMVVVGAVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW +SKKKAFT+Y KK+  + G   +  +LE++KKYCTV+R              KKAHL
Sbjct: 121 NWYRSKKKAFTRYAKKHSENSG-ASVARELERIKKYCTVVRVLAHTQISKTGLQQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGSVA KVDFA   FEK + + +VF++DE IDIIGVTKG GYEGV  RWG TRL
Sbjct: 180 MEIQVNGGSVADKVDFARSHFEKTVDVGSVFEQDECIDIIGVTKGHGYEGVTARWGTTRL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHP+ V F+VARAGQ GYH RT MN KIY++   +  S S  TE
Sbjct: 240 PRKTHRGLRKVACIGAWHPSNVMFSVARAGQRGYHSRTSMNHKIYRIANGASGS-SGSTE 298

Query: 287 FD 288
           FD
Sbjct: 299 FD 300


>gi|121715726|ref|XP_001275472.1| 60S ribosomal protein L3 [Aspergillus clavatus NRRL 1]
 gi|119403629|gb|EAW14046.1| 60S ribosomal protein L3 [Aspergillus clavatus NRRL 1]
          Length = 392

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 207/315 (65%), Positives = 251/315 (79%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSL FLPRKRA+RHRGKVK+FPKDDP KP  LTA +GYKAGMT +VRD+
Sbjct: 1   MSHRKYEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTASMGYKAGMTTVVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+K+HKKE  EAVTIIETPPLV VGVVGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGAKMHKKEIVEAVTIIETPPLVAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY K++  + G   +  +LE++KKYCTV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKQHAEESG-ASVTRELERIKKYCTVVRVLAHTQIRKTPLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+VA KVDFA   FEK I ID++F+KDEMID+I VTKG G++GV +RWG  +L
Sbjct: 180 MEIQVNGGAVADKVDFARNLFEKPIEIDSIFEKDEMIDVIAVTKGHGFQGVTSRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT  N K++++GK + E  +A TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSCNHKVFRIGKGTDEG-NASTE 298

Query: 287 FDRSVYLLSSLMGSF 301
           FD S   ++  MG F
Sbjct: 299 FDISKKQITP-MGGF 312


>gi|308323287|gb|ADO28780.1| 60S ribosomal protein l3 [Ictalurus punctatus]
          Length = 403

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 205/319 (64%), Positives = 255/319 (79%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+ RHRGKVK+FPKDDP+KP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSRRHRGKVKSFPKDDPTKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP++VVG+VGYV+TPRGLRS  TV+A+H+++E RRRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMMVVGIVGYVETPRGLRSFKTVFAEHISDECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY+KK++ D+GKK ++     MKKYC VIR              KK+HL
Sbjct: 121 NWYKSKKKAFTKYSKKWQDDEGKKQLEKDFSSMKKYCKVIRIIAHTQMRLLPLRQKKSHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG++++KVD+A    E+ +PI+ VF +DEMID+IGVTKG GY+GV +RW   +L
Sbjct: 181 MEIQLNGGTISEKVDWAREKLEQAVPINNVFSQDEMIDVIGVTKGHGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEVNKKIYKIGQGYHTKDGKVIK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   ++ L G
Sbjct: 301 NNASTDYDLSNKSINPLGG 319


>gi|302833677|ref|XP_002948402.1| component of cytosolic 80S ribosome and 60S large subunit [Volvox
           carteri f. nagariensis]
 gi|300266622|gb|EFJ50809.1| component of cytosolic 80S ribosome and 60S large subunit [Volvox
           carteri f. nagariensis]
          Length = 386

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 229/315 (72%), Positives = 259/315 (82%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPR GSLGF PRKR  R RGKVK+FP+DD SKP  LTAF+GYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRSGSLGFSPRKRCRRGRGKVKSFPRDDASKPVHLTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCE VTIIE PP+VVVGVVGYVKTPRGLRSL TVWA+HL+EEV+RRFYK
Sbjct: 61  EKPGSKLHKKETCEPVTIIECPPMVVVGVVGYVKTPRGLRSLNTVWAEHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KKY   DGKK I+A+L  +KK+C+VIR              KKAHL
Sbjct: 121 NWFKSKKKAFTKYAKKY--SDGKKAIEAELASLKKHCSVIRVLAHTQVKKLGFGQKKAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           +EIQVNGG+VAQKVDFAY  FEKQ+ +DAVFQ +EMID I +TKG G +GVV RWGVTRL
Sbjct: 179 IEIQVNGGTVAQKVDFAYAMFEKQVSVDAVFQPNEMIDTIAITKGHGVQGVVQRWGVTRL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPARV +TVARAGQ G+HHRTE+NKK+YK+GK  + SH A T+
Sbjct: 239 PRKTHRGLRKVACIGAWHPARVKWTVARAGQQGFHHRTEINKKVYKIGKKGEASHLATTD 298

Query: 287 FDRSVYLLSSLMGSF 301
           FD +   ++  MG F
Sbjct: 299 FDVTKKEITP-MGGF 312


>gi|6537320|gb|AAF15600.1|AF198447_1 60S ribosomal protein L3 [Emericella nidulans]
 gi|259479602|tpe|CBF69975.1| TPA: 60S ribosomal protein L3 [Source:UniProtKB/TrEMBL;Acc:Q9UV31]
           [Aspergillus nidulans FGSC A4]
          Length = 392

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 204/313 (65%), Positives = 250/313 (79%), Gaps = 16/313 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSL +LPRKRA+RHRG+VK+FPKDDP KP  LTA +GYKAGMT +VRD+
Sbjct: 1   MSHRKYEAPRHGSLAYLPRKRAARHRGRVKSFPKDDPKKPVHLTASMGYKAGMTTVVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+K+HKKE  EA T+IETPPL+ VGVVGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGAKMHKKEIVEAATVIETPPLIAVGVVGYIETPRGLRSLATVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK+  ++G   I   LE++KKYCTV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKKHSEENG-ASITRDLERIKKYCTVVRVLAHTQIRKTPLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGSVA+KVDFA   FEK I ID +F+KDEMID+I VTKG G++GV +RWG  +L
Sbjct: 180 MEIQVNGGSVAEKVDFARNLFEKPIEIDTIFEKDEMIDVIAVTKGHGFQGVTSRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT  N K++++GK S E+ +A T+
Sbjct: 240 PRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSCNHKVFRIGKGSDEA-NASTD 298

Query: 287 FDRSVYLLSSLMG 299
           FD S   ++ L G
Sbjct: 299 FDVSKKQITPLGG 311


>gi|348687785|gb|EGZ27599.1| hypothetical protein PHYSODRAFT_284116 [Phytophthora sojae]
          Length = 389

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 207/313 (66%), Positives = 251/313 (80%), Gaps = 17/313 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           M HRKFE PRHG LGFLP+KR   HRG+V+ FP+DD SK   LTAF+GYKAGMTHI+R+V
Sbjct: 1   MGHRKFEAPRHGHLGFLPKKRTKHHRGRVRKFPRDDASKAPHLTAFMGYKAGMTHIMREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HKKE  E V+I+ETPP+VV+GVVGY++TPRGLR+L TV+A+HL+EEV+RRFYK
Sbjct: 61  DRPGSKVHKKEIVEPVSIVETPPMVVIGVVGYLETPRGLRTLTTVFAEHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSK+KAFTKY KKY+T     DI+ +L ++KKYC V+R              KKAHL
Sbjct: 121 NWYKSKRKAFTKYAKKYQTAPA--DIENELNRIKKYCQVVRVLAHTQVRKVKLRQKKAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           +E+QVNGGSV  KVDFA   FEKQ+P+ AVF KDEMID+IGVTKG G EGV+TRWGVTRL
Sbjct: 179 LEVQVNGGSVGDKVDFAKSLFEKQVPVTAVFAKDEMIDVIGVTKGHGIEGVITRWGVTRL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHP+RV FTV RAGQ+GYHHRTE+NKKIY++G A+ +  S MTE
Sbjct: 239 PRKTHRGLRKVACIGAWHPSRVRFTVPRAGQHGYHHRTEINKKIYRIG-AAGDKKSCMTE 297

Query: 287 FDRSVYLLSSLMG 299
            D +   ++ L G
Sbjct: 298 QDLTEKDITPLGG 310


>gi|414587234|tpg|DAA37805.1| TPA: hypothetical protein ZEAMMB73_880497 [Zea mays]
 gi|414588490|tpg|DAA39061.1| TPA: hypothetical protein ZEAMMB73_842297 [Zea mays]
 gi|414866106|tpg|DAA44663.1| TPA: hypothetical protein ZEAMMB73_480377 [Zea mays]
          Length = 337

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 208/264 (78%), Positives = 229/264 (86%), Gaps = 16/264 (6%)

Query: 53  MTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNE 112
           MTHIVR+VEKPGSKLHKKETCEAVTIIETPPLV+VG+V YVKTPRGLR+L +VWAQHL+E
Sbjct: 1   MTHIVREVEKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSE 60

Query: 113 EVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR----------- 161
           EVRRRFYKNWCKSKKKAFTKY  KYE D GKK+IQ QLEKMKKY +VIR           
Sbjct: 61  EVRRRFYKNWCKSKKKAFTKYALKYENDAGKKEIQLQLEKMKKYASVIRVIAHTQIRKMK 120

Query: 162 ----KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGV 217
               KKAHLMEIQVNGG++A KVD+ Y FFEK++P+DAVFQKDEMIDIIGVTKGKGYEGV
Sbjct: 121 GLKQKKAHLMEIQVNGGTIADKVDYGYKFFEKEVPVDAVFQKDEMIDIIGVTKGKGYEGV 180

Query: 218 VTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAS 277
           VTRWGVTRLPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GKA 
Sbjct: 181 VTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKAG 240

Query: 278 QESHSAMTEFDRSVYLLSSLMGSF 301
           QE+H A TEFDR+   ++  MG F
Sbjct: 241 QETHDASTEFDRTEKDITP-MGGF 263


>gi|21215170|gb|AAM43909.1|AF464911_1 large subunit ribosomal protein L3 [Aspergillus fumigatus]
          Length = 392

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 209/315 (66%), Positives = 251/315 (79%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSL FLPRKRA+RHRGKVK+FPK DP KP  LTA +GYKAGMT +VRD+
Sbjct: 1   MSHRKYEAPRHGSLAFLPRKRAARHRGKVKSFPKYDPKKPVHLTASMGYKAGMTTVVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+K+HKKE  EAVTIIETPPLV VGVVGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGAKMHKKEIVEAVTIIETPPLVAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK+  ++G   I  +LE++KKYCTV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKKHAEENG-ASITRELERIKKYCTVVRVLAHTQIRKTPLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGSVA KVDFA   FEK I ID++F+KDEMID+I VTKG G++GV +RWG  +L
Sbjct: 180 MEIQVNGGSVADKVDFARNLFEKPIEIDSIFEKDEMIDVIAVTKGHGFQGVTSRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT  N K++++GK S E  +A T+
Sbjct: 240 PRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSCNHKVFRIGKGSDEG-NASTD 298

Query: 287 FDRSVYLLSSLMGSF 301
           FD S   ++  MG F
Sbjct: 299 FDISKKQITP-MGGF 312


>gi|297296032|ref|XP_001082799.2| PREDICTED: 60S ribosomal protein L3-like isoform 1 [Macaca mulatta]
          Length = 403

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 208/319 (65%), Positives = 256/319 (80%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  TV+A+H+++E +RRF K
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFCK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ +DGKK ++     MKKYC VIR              KKAHL
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           +EIQVNGG+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 VEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQES 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   ++ L G
Sbjct: 301 NNASTDYDLSDKSINPLGG 319


>gi|425765902|gb|EKV04543.1| Transcriptional corepressor Cyc8, putative [Penicillium digitatum
            PHI26]
 gi|425779237|gb|EKV17313.1| Transcriptional corepressor Cyc8, putative [Penicillium digitatum
            Pd1]
          Length = 1267

 Score =  430 bits (1105), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 207/315 (65%), Positives = 248/315 (78%), Gaps = 17/315 (5%)

Query: 1    MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
            MSHRKFE PRHGSL +LPRKRA+RHRGKVK+FPKDD  KP  LTA +GYKAGMT +VRD+
Sbjct: 876  MSHRKFEAPRHGSLAYLPRKRAARHRGKVKSFPKDDAKKPVHLTASMGYKAGMTTVVRDL 935

Query: 61   EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
            ++PG+K+HKKE  EAVT+IETPPLV VGVVGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 936  DRPGAKMHKKEIVEAVTVIETPPLVAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 995

Query: 121  NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
            NW KSKKKAFTKY K +    G   I  +LE+++KYCTV+R              KKAHL
Sbjct: 996  NWYKSKKKAFTKYAKSHAESSGAS-ITRELERIQKYCTVVRVLAHTQIRQTPIKQKKAHL 1054

Query: 167  MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            MEIQVNGGSV+ KV+FA   FEK I ID++F+KDEMID+I VTKG G+ GV +RWG T+L
Sbjct: 1055 MEIQVNGGSVSDKVEFARNLFEKTIDIDSIFEKDEMIDVIAVTKGHGFSGVTSRWGTTKL 1114

Query: 227  PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
            PRKTH+GLRKVACIGAWHP  V +TVARAGQ+GYHHRT  N KI+++GK S E + A TE
Sbjct: 1115 PRKTHKGLRKVACIGAWHPNHVQWTVARAGQDGYHHRTSCNHKIFRIGKGSDEGN-ASTE 1173

Query: 287  FDRSVYLLSSLMGSF 301
            FD S   ++  MG F
Sbjct: 1174 FDISKKQITP-MGGF 1187


>gi|344296357|ref|XP_003419875.1| PREDICTED: 60S ribosomal protein L3-like [Loxodonta africana]
          Length = 566

 Score =  430 bits (1105), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 209/318 (65%), Positives = 254/318 (79%), Gaps = 20/318 (6%)

Query: 2   SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
           SHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP  LTAFLGYKAGMTHIVR+V+
Sbjct: 165 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDTSKPVHLTAFLGYKAGMTHIVREVD 224

Query: 62  KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
           +PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  TV+A+H+++E +RRFYKN
Sbjct: 225 RPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKN 284

Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLM 167
           W KSKKKAFTKY KK++ DDGKK ++     MK+YC VIR              KKAHLM
Sbjct: 285 WHKSKKKAFTKYCKKWQDDDGKKQLEKDFSSMKRYCQVIRVIAHTQMRLLPLRQKKAHLM 344

Query: 168 EIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 227
           EIQVNGG+VA+KVD+A    E+Q+P+  VF +DEMID+IGVTKGKGY+GV +RW   +LP
Sbjct: 345 EIQVNGGTVAEKVDWARERLEQQVPVSQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP 404

Query: 228 RKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQESH 281
           RKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           +
Sbjct: 405 RKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKVGQGYLIKDGKLIKN 464

Query: 282 SAMTEFDRSVYLLSSLMG 299
           +A T++D S   ++ L G
Sbjct: 465 NASTDYDLSDKSINPLGG 482


>gi|405123316|gb|AFR98081.1| large subunit ribosomal protein L3 [Cryptococcus neoformans var.
           grubii H99]
          Length = 390

 Score =  430 bits (1105), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 204/302 (67%), Positives = 240/302 (79%), Gaps = 16/302 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSL FLPRKRA+RHRG+ KAFPKDDP KP  LTA +GYKAGMTHIVRD+
Sbjct: 1   MSHRKYEEPRHGSLAFLPRKRAARHRGRCKAFPKDDPKKPVHLTAVMGYKAGMTHIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  EAVT+IETPP+VVVG VGYV+TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGSKMHKREVVEAVTVIETPPMVVVGAVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW +SKKKAFT+Y KK+  + G   +  + E++KKYCTV+R              KKAHL
Sbjct: 121 NWYRSKKKAFTRYAKKHSENSG-ASVAREFERIKKYCTVVRVLAHTQISKTGLQQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGSVA KVDFA   FEK + + +VF++DE IDIIGV+KG GYEGV  RWG TRL
Sbjct: 180 MEIQVNGGSVADKVDFARSHFEKTVDVGSVFEQDECIDIIGVSKGHGYEGVTARWGTTRL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHP+ V F+VARAGQ GYH RT MN KIY++   +  S S  TE
Sbjct: 240 PRKTHRGLRKVACIGAWHPSNVMFSVARAGQRGYHSRTSMNHKIYRIANGASGS-SGSTE 298

Query: 287 FD 288
           FD
Sbjct: 299 FD 300


>gi|402589180|gb|EJW83112.1| 50S ribosomal protein L3 [Wuchereria bancrofti]
          Length = 396

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 198/290 (68%), Positives = 241/290 (83%), Gaps = 14/290 (4%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP  LTAF+G+KAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSMGFTPKKRSKRHRGKVKAFPKDDPSKPIHLTAFMGFKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           +KPGSK++KKE  EAVT++ETPP+++VGVVGY+ TPRG R   TVWA+HL+E+ RRRFYK
Sbjct: 61  DKPGSKVNKKEVVEAVTVLETPPMIIVGVVGYIDTPRGPRQFKTVWAEHLSEDCRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW  SKKKAF K+ KK++ +DG K IQA L KMKKYC++IR              KKAH+
Sbjct: 121 NWNSSKKKAFQKHAKKWQDEDGMKSIQADLAKMKKYCSIIRVIAHTQMKVMKHREKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG++ +KVD+AY  FEKQ+P+D+VF +DEMID IGVTKGKG++GV +RW   +L
Sbjct: 181 MEIQVNGGTIPEKVDWAYEHFEKQVPVDSVFAQDEMIDTIGVTKGKGFKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA 276
           PRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYHHRTE+NKKIY++ K+
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEVNKKIYRIAKS 290


>gi|170578047|ref|XP_001894243.1| 60S ribosomal protein L3 [Brugia malayi]
 gi|158599245|gb|EDP36917.1| 60S ribosomal protein L3, putative [Brugia malayi]
          Length = 430

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 199/290 (68%), Positives = 241/290 (83%), Gaps = 14/290 (4%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP  LTAF+G+KAGMTHIVR+V
Sbjct: 35  MSHRKFSAPRHGSMGFTPKKRSKRHRGKVKAFPKDDPSKPIHLTAFMGFKAGMTHIVREV 94

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           +KPGSK++KKE  EAVT++ETPP+++VGVVGY+ TPRG R   TVWA+HL+E+ RRRFYK
Sbjct: 95  DKPGSKVNKKEVVEAVTVLETPPMIIVGVVGYIDTPRGPRQFKTVWAEHLSEDCRRRFYK 154

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW  SKKKAF K+ KK++ +DG K IQA L KMKKYC++IR              KKAH+
Sbjct: 155 NWNSSKKKAFQKHAKKWQDEDGMKSIQADLAKMKKYCSIIRVIAHTQMKVMKHREKKAHI 214

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+V +KVD+AY  FEKQ+P+D+VF +DEMID IGVTKGKG++GV +RW   +L
Sbjct: 215 MEIQVNGGTVPEKVDWAYEHFEKQVPVDSVFAQDEMIDTIGVTKGKGFKGVTSRWHTKKL 274

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA 276
           PRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYHHRTE+NKKIY++ K+
Sbjct: 275 PRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEVNKKIYRIAKS 324


>gi|452846836|gb|EME48768.1| hypothetical protein DOTSEDRAFT_67718 [Dothistroma septosporum
           NZE10]
          Length = 392

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 208/315 (66%), Positives = 253/315 (80%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSL FLPRKRASRHRGKVK+FPKDD  +   LTA +GYKAGMT IVRD+
Sbjct: 1   MSHRKFEAPRHGSLAFLPRKRASRHRGKVKSFPKDDQKQKPHLTAAMGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+KLHKKE  EAVT+IETPP+VVVG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGAKLHKKEIVEAVTVIETPPMVVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK+  ++G K+I   LE++KKYCTV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKKH-AEEGGKNITRDLERIKKYCTVVRVLAHTQIHKTPLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGS+A KV+F +G FEK + ID+VF++DEMID I VTKG G++GV +RWG  +L
Sbjct: 180 MEIQVNGGSIADKVEFGHGLFEKPVEIDSVFEQDEMIDCIAVTKGHGFQGVTSRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++GK S E  +A T+
Sbjct: 240 PRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKVYRVGKGSDER-NATTD 298

Query: 287 FDRSVYLLSSLMGSF 301
           FD S   ++  MG F
Sbjct: 299 FDHSNKQITP-MGGF 312


>gi|74186276|dbj|BAE42921.1| unnamed protein product [Mus musculus]
          Length = 403

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 208/319 (65%), Positives = 254/319 (79%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP  LTAFLGYKAGM HIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMIHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  TV+A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ D GKK ++     MKKYC VIR              KKAHL
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLPLRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQES 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   ++ L G
Sbjct: 301 NNASTDYDLSDKSINPLGG 319


>gi|189204215|ref|XP_001938443.1| 60S ribosomal protein L3 [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187985542|gb|EDU51030.1| 60S ribosomal protein L3 [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 392

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 207/315 (65%), Positives = 249/315 (79%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSL FLPRKRA+RHRGKVK+FPKDDP KP  LTA +GYKAGMT IVRD+
Sbjct: 1   MSHRKFEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+KLHKKE  EA T+IETPP++ VG+VGY++TPRGLRSL TVWA+HL++EV+RRFY+
Sbjct: 61  DRPGAKLHKKEIVEACTVIETPPMIAVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYR 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK+   +G + I  +LE+MKKYCTVIR              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKKHSESNG-QSITRELERMKKYCTVIRVLAHTQISKTPLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGGS+A KV+  +G FEK I I ++F+ +EMID+I VTKG GY GV +RWG  +L
Sbjct: 180 MEIQINGGSIADKVEHGHGLFEKPIEISSIFEANEMIDVIAVTKGHGYNGVTSRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHPA V +TVARAGQ GYHHRT +N KIY++GKA  E  +A TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPAHVQWTVARAGQMGYHHRTSVNHKIYRIGKADDEG-NASTE 298

Query: 287 FDRSVYLLSSLMGSF 301
           FD S   ++  MG F
Sbjct: 299 FDVSKKRITP-MGGF 312


>gi|242810586|ref|XP_002485611.1| 60S ribosomal protein L3 [Talaromyces stipitatus ATCC 10500]
 gi|218716236|gb|EED15658.1| 60S ribosomal protein L3 [Talaromyces stipitatus ATCC 10500]
          Length = 398

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 204/313 (65%), Positives = 250/313 (79%), Gaps = 16/313 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           +SHRK+E PRHGSL +LPRKRA+RHRGKVK+FPKDDP KP  LTA +GYKAGMT IVRD+
Sbjct: 7   VSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTASMGYKAGMTTIVRDL 66

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+K+HKKE  EAVT+IETPPLV VGVVGY++TPRGLRSL TVWA+HL++E++RRFYK
Sbjct: 67  DRPGAKMHKKEVVEAVTVIETPPLVAVGVVGYIETPRGLRSLTTVWAEHLSDELKRRFYK 126

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFT+Y KK+ T+     +  +LE++KKYCTV+R              KKAHL
Sbjct: 127 NWYKSKKKAFTRYAKKH-TESSAASVTRELERIKKYCTVVRVLAHTQIRKTPLKQKKAHL 185

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGSVA KVDFA+G FEK I ID +F+++E+ID+I VTKG G+ GV +RWG  +L
Sbjct: 186 MEIQVNGGSVADKVDFAHGLFEKTIDIDTIFEQNEVIDVIAVTKGHGFNGVTSRWGTKKL 245

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP  V +TVARAGQ GYHHRT +N KIY++GK S E  +A TE
Sbjct: 246 PRKTHKGLRKVACIGAWHPNHVQWTVARAGQMGYHHRTSVNHKIYRIGKGSDEG-NASTE 304

Query: 287 FDRSVYLLSSLMG 299
           +D S   ++ L G
Sbjct: 305 YDVSKKTITPLGG 317


>gi|145232153|ref|XP_001399531.1| 60S ribosomal protein L3 [Aspergillus niger CBS 513.88]
 gi|134056442|emb|CAL00609.1| unnamed protein product [Aspergillus niger]
          Length = 392

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 207/315 (65%), Positives = 250/315 (79%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSL +LPRKRA+RHRGKVK+FPKDDP KP  LTA +GYKAGMT +VRD+
Sbjct: 1   MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTATMGYKAGMTTVVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+K+HKKE  EA T+IETPPLV VGVVGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGAKMHKKEVVEAATVIETPPLVAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK+  ++G   I  +LE++KKYCTV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKKHAEENG-ASITRELERIKKYCTVVRVLAHTQVRKTPLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGSVA KVDFA   FEK I ID++F+KDEMID+I VTKG G++GV +RWG  +L
Sbjct: 180 MEIQVNGGSVADKVDFARNLFEKPIEIDSIFEKDEMIDVIAVTKGHGFQGVTSRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP  V +TVARAGQ GYHHRT  N K++++GK S E  +A T+
Sbjct: 240 PRKTHKGLRKVACIGAWHPNHVQWTVARAGQMGYHHRTSCNHKVFRVGKGSDEG-NASTD 298

Query: 287 FDRSVYLLSSLMGSF 301
           FD S   ++  MG F
Sbjct: 299 FDISKKQITP-MGGF 312


>gi|27807287|ref|NP_777140.1| 60S ribosomal protein L3 [Bos taurus]
 gi|730564|sp|P39872.2|RL3_BOVIN RecName: Full=60S ribosomal protein L3
 gi|187609300|pdb|2ZKR|BB Chain b, Structure Of A Mammalian Ribosomal 60s Subunit Within An
           80s Complex Obtained By Docking Homology Models Of The
           Rna And Proteins Into An 8.7 A Cryo-Em Map
 gi|450499|emb|CAA82654.1| ribosomal protein L3 [Bos taurus]
 gi|59858389|gb|AAX09029.1| ribosomal protein L3 [Bos taurus]
 gi|74267942|gb|AAI02254.1| Ribosomal protein L3 [Bos taurus]
 gi|296486985|tpg|DAA29098.1| TPA: 60S ribosomal protein L3 [Bos taurus]
 gi|1092507|prf||2024221A ribosomal protein L3
          Length = 403

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 206/319 (64%), Positives = 254/319 (79%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+V+VG+VGYV+TPRGLR+  T++A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++  DGKK ++     MKKYC VIR              KKAHL
Sbjct: 121 NWHKSKKKAFTKYCKKWQDADGKKQLERDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           ME+QVNGG+VA+K+D+A    E+Q+P+  VF +DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEVQVNGGTVAEKLDWARERLEQQVPVSQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQES 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   ++ L G
Sbjct: 301 NNASTDYDLSDKSINPLGG 319


>gi|74185237|dbj|BAE30097.1| unnamed protein product [Mus musculus]
          Length = 403

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 208/319 (65%), Positives = 254/319 (79%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  TV+A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ D GKK ++     MKKYC VIR              KKAHL
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLPLRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTK KGY+GV +RW   +L
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKDKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQES 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   ++ L G
Sbjct: 301 NNASTDYDLSDKSINPLGG 319


>gi|7159574|emb|CAB76199.1| ribosomal protein L3 [Bos taurus]
          Length = 403

 Score =  429 bits (1103), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 206/319 (64%), Positives = 254/319 (79%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+V+VG+VGYV+TPRGLR+  T++A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++  DGKK ++     MKKYC VIR              KKAHL
Sbjct: 121 NWHKSKKKAFTKYCKKWQDADGKKQLERDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           ME+QVNGG+VA+K+D+A    E+Q+P+  VF +DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEVQVNGGTVAEKLDWARERLEQQVPVSQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQES 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   ++ L G
Sbjct: 301 NNASTDYDLSDKSINPLGG 319


>gi|330907574|ref|XP_003295853.1| 60S ribosomal protein L3 [Pyrenophora teres f. teres 0-1]
 gi|311332456|gb|EFQ96051.1| hypothetical protein PTT_03505 [Pyrenophora teres f. teres 0-1]
          Length = 392

 Score =  429 bits (1103), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 207/315 (65%), Positives = 249/315 (79%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSL FLPRKRA+RHRGKVK+FPKDDP KP  LTA +GYKAGMT IVRD+
Sbjct: 1   MSHRKFEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+KLHKKE  EA T+IETPP++ VG+VGY++TPRGLRSL TVWA+HL++EV+RRFY+
Sbjct: 61  DRPGAKLHKKEIVEACTVIETPPMIAVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYR 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK+  ++G + I  +LE+MKKYCTVIR              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKKHSEENG-QSITRELERMKKYCTVIRVLAHTQISKTPLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGGS+A KV   +G FEK I I ++F+ +EMID+I VTKG GY GV +RWG  +L
Sbjct: 180 MEIQINGGSIADKVAHGHGLFEKPIEISSIFEANEMIDVIAVTKGHGYNGVTSRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHPA V +TVARAGQ GYHHRT +N KIY++GKA  E  +A TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPAHVQWTVARAGQMGYHHRTSVNHKIYRIGKADDEG-NASTE 298

Query: 287 FDRSVYLLSSLMGSF 301
           FD S   ++  MG F
Sbjct: 299 FDVSKKRITP-MGGF 312


>gi|149240189|ref|XP_001525970.1| 60S ribosomal protein L3 [Lodderomyces elongisporus NRRL YB-4239]
 gi|146450093|gb|EDK44349.1| 60S ribosomal protein L3 [Lodderomyces elongisporus NRRL YB-4239]
          Length = 389

 Score =  429 bits (1103), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 203/315 (64%), Positives = 254/315 (80%), Gaps = 18/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSLGFLPRKRA++ RG+VK+FPKD  SKP  LTAFLGYKAGMT IVRD+
Sbjct: 1   MSHRKYEAPRHGSLGFLPRKRAAKQRGRVKSFPKDVKSKPVALTAFLGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  EA T+++TPPLV+VGVVGYV+TPRGLRSL TVWA+HL+EE++RRFYK
Sbjct: 61  DRPGSKMHKREVVEAATVVDTPPLVIVGVVGYVETPRGLRSLTTVWAEHLSEEIKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY+ KY +D   K I+ +L ++KKY +V+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYSAKYASD--AKQIETELARIKKYASVVRVLAHTQIKKTPLSQKKAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQ+NGGS++ KVD+A   FEK++ +D+VF+++EMID+I VTKG G+EGV  RWG  +L
Sbjct: 179 AEIQINGGSISDKVDWAKEHFEKEVSVDSVFEQNEMIDVIAVTKGHGFEGVTHRWGTKKL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPA V++TVARAGQNGYHHRT +N K+Y++GK   ES+ A TE
Sbjct: 239 PRKTHRGLRKVACIGAWHPANVNWTVARAGQNGYHHRTSINHKVYRVGKGGDESNGA-TE 297

Query: 287 FDRSVYLLSSLMGSF 301
           FDR+   ++  MG F
Sbjct: 298 FDRTKKTINP-MGGF 311


>gi|426225796|ref|XP_004007048.1| PREDICTED: 60S ribosomal protein L3 [Ovis aries]
          Length = 403

 Score =  429 bits (1102), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 206/319 (64%), Positives = 254/319 (79%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+V+VG+VGYV+TPRGLR+  T++A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++  DGKK ++     MKKYC VIR              KKAHL
Sbjct: 121 NWHKSKKKAFTKYCKKWQDVDGKKQLERDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           ME+QVNGG+VA+K+D+A    E+Q+P+  VF +DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEVQVNGGTVAEKLDWARERLEQQVPVSQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQES 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   ++ L G
Sbjct: 301 NNASTDYDLSDKSINPLGG 319


>gi|225706512|gb|ACO09102.1| 60S ribosomal protein L3 [Osmerus mordax]
          Length = 403

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 205/319 (64%), Positives = 252/319 (78%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+ RHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSRRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP++VVGVVGYV+TPRGLRS  T++A+H+++E +RRFY+
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMIVVGVVGYVETPRGLRSFKTIFAEHVSDECKRRFYR 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ D+GKK ++     MKKYC V+R              KK+HL
Sbjct: 121 NWYKSKKKAFTKYCKKWQDDEGKKQLEKDFASMKKYCQVVRILAHTQMRLLPLRQKKSHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           ME+Q+NGGS+A KVD+A    E+ +PI  VF +DEMID+IGVTKG GY+GV +RW   +L
Sbjct: 181 MEVQLNGGSIADKVDWAREKLEQAVPIANVFTQDEMIDVIGVTKGHGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGFHTKDGKLVK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A TE+D S   ++ L G
Sbjct: 301 NNASTEYDLSNKSINPLGG 319


>gi|75076108|sp|Q4R5Q0.3|RL3_MACFA RecName: Full=60S ribosomal protein L3
 gi|67970465|dbj|BAE01575.1| unnamed protein product [Macaca fascicularis]
          Length = 403

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 208/319 (65%), Positives = 255/319 (79%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE   AVTI+ETPP+VVVG+VGYV+TPRGLR+  TV+A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVVAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ +DGKK ++     MKKYC VIR              KKAHL
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQES 280
           PRKTHRGLRKVACIGA HPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           
Sbjct: 241 PRKTHRGLRKVACIGARHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   ++ L G
Sbjct: 301 NNASTDYDLSDKSINPLGG 319


>gi|255946257|ref|XP_002563896.1| Pc20g14180 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211588631|emb|CAP86747.1| Pc20g14180 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 392

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 206/315 (65%), Positives = 248/315 (78%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSL +LPRKRA+RHRGKVK+FPKDD  KP  LTA +GYKAGMT +VRD+
Sbjct: 1   MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDAKKPVHLTASMGYKAGMTTVVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+K+HKKE  EAVT+IETPPLV VGVVGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGAKMHKKEIVEAVTVIETPPLVAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY K +    G   I  +LE+++KYCTV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKSHAESSG-ASITRELERIQKYCTVVRVLAHTQIRQTPIKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGSVA KVDFA   FEK I ID++F+KDEMID+I VTKG G+ GV +RWG T+L
Sbjct: 180 MEIQVNGGSVADKVDFARNLFEKTIDIDSIFEKDEMIDVIAVTKGHGFSGVTSRWGTTKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP  V +TVARAGQ+GYHHRT  N K++++GK + E  +A TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPNHVQWTVARAGQDGYHHRTSCNHKVFRIGKGTDEG-NASTE 298

Query: 287 FDRSVYLLSSLMGSF 301
           FD S   ++  MG F
Sbjct: 299 FDISKKQITP-MGGF 312


>gi|296237103|ref|XP_002763611.1| PREDICTED: 60S ribosomal protein L3-like isoform 1 [Callithrix
           jacchus]
          Length = 403

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 206/319 (64%), Positives = 255/319 (79%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLP+KR SRHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPQKRNSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  TV+A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ +DGKK ++     MKKYC VIR              KKAHL
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+V++K+D+A    E+Q+P++ VF +DEMID+IGV+K KGY+GV +RW   +L
Sbjct: 181 MEIQVNGGTVSEKLDWARKRLEQQVPVNQVFGQDEMIDVIGVSKRKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQES 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   ++ L G
Sbjct: 301 NNASTDYDLSDKSINPLGG 319


>gi|361126129|gb|EHK98144.1| putative 60S ribosomal protein L3 [Glarea lozoyensis 74030]
          Length = 391

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 205/315 (65%), Positives = 249/315 (79%), Gaps = 18/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSL FLPRKRA+RHRGKVK+FPKDDP KP  LTA LGYKAGMT IVRD+
Sbjct: 1   MSHRKFEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTATLGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+K HKKE  EAVT+IETPP++VVG+VGY++TPRGLRSL TVWA+HL++E++RRFYK
Sbjct: 61  DRPGAKSHKKEVVEAVTVIETPPVIVVGLVGYIETPRGLRSLTTVWAEHLSDELKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KKY +  GK +I  +  ++ KYC+V+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKKYAS--GKNEIDREFARIAKYCSVVRVLAHTQIRQTPLKQKKAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGSV  KV FA G FEK + I ++F++DEMID+I VTKG G+ GV +RWG  +L
Sbjct: 179 MEIQVNGGSVEDKVSFAKGLFEKPVEISSIFEQDEMIDVIAVTKGHGFSGVTSRWGTKKL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP+ V +TVARAGQ+GYHHRT +N KIY++GK + E  +A TE
Sbjct: 239 PRKTHKGLRKVACIGAWHPSHVQWTVARAGQDGYHHRTSVNHKIYRVGKGTDEG-NATTE 297

Query: 287 FDRSVYLLSSLMGSF 301
           FD S   ++  MG F
Sbjct: 298 FDHSKKQITP-MGGF 311


>gi|154426164|gb|AAI51556.1| Ribosomal protein L3 [Bos taurus]
          Length = 403

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 205/319 (64%), Positives = 253/319 (79%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP  LTAFLGYKAGMTHIV +V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVMEV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+V+VG+VGYV+TPRGLR+  T++A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++  DGKK ++     MKKYC VIR              KKAHL
Sbjct: 121 NWHKSKKKAFTKYCKKWQDADGKKQLERDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           ME+QVNGG+VA+K+D+A    E+Q+P+  VF +DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEVQVNGGTVAEKLDWARERLEQQVPVSQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQES 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   ++ L G
Sbjct: 301 NNASTDYDLSDKSINPLGG 319


>gi|398411379|ref|XP_003857029.1| 60S ribosomal protein L3 [Zymoseptoria tritici IPO323]
 gi|339476914|gb|EGP92005.1| hypothetical protein MYCGRDRAFT_102848 [Zymoseptoria tritici
           IPO323]
          Length = 392

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 201/313 (64%), Positives = 250/313 (79%), Gaps = 16/313 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSL FLPRKRA+RHRGKVK+FPKDDP +   LTA +GYKAGMT IVRD+
Sbjct: 1   MSHRKFEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKQKTHLTAAMGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+KLHKKE  EA T+IETPP++VVG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGAKLHKKEIVEAATVIETPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK+  ++G K I   LE++KKYCTV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKKH-AEEGGKSITRDLERIKKYCTVVRVLAHTQISKTPLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGS+A KV+F  G FEK + ID++F+++EMID I VTKG G+ GV +RWG  +L
Sbjct: 180 MEIQVNGGSIADKVEFGQGLFEKPVEIDSIFEQNEMIDCIAVTKGHGFSGVTSRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP+ V ++VARAGQ+GYHHRT +N K+Y++GK + E  +A T+
Sbjct: 240 PRKTHKGLRKVACIGAWHPSHVQWSVARAGQDGYHHRTSVNHKVYRIGKGNDEG-NATTD 298

Query: 287 FDRSVYLLSSLMG 299
           FD S   ++ L G
Sbjct: 299 FDHSKKAITPLGG 311


>gi|449300493|gb|EMC96505.1| hypothetical protein BAUCODRAFT_24265 [Baudoinia compniacensis UAMH
           10762]
          Length = 392

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 207/315 (65%), Positives = 251/315 (79%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSL FLPRKRA+RHRGKVK+FPKDDP K   LTA +GYKAGMT IVRD+
Sbjct: 1   MSHRKFEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKAVHLTAAMGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+K HKKE  EA T+IETPP++VVG+VGY++TPRGLRSL TVWA+HL++E++RRFYK
Sbjct: 61  DRPGAKNHKKEIVEACTVIETPPMIVVGLVGYIETPRGLRSLKTVWAEHLSDELKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK+  D+  K+I   LE++KKYCTV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKKH-ADESGKNITQDLERIKKYCTVVRVLAHTQISKTPLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGS++ KVD+A+G FEK + ID VF++DEMID I VTKG GY+GV +RWG  +L
Sbjct: 180 MEIQVNGGSLSDKVDYAHGLFEKPVEIDNVFEQDEMIDCIAVTKGHGYQGVTSRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N KIY++GK S E  +A T+
Sbjct: 240 PRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKIYRVGKGSDEG-NASTD 298

Query: 287 FDRSVYLLSSLMGSF 301
           FD S   ++  MG F
Sbjct: 299 FDVSKKKITP-MGGF 312


>gi|348510237|ref|XP_003442652.1| PREDICTED: 60S ribosomal protein L3 [Oreochromis niloticus]
          Length = 403

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 207/321 (64%), Positives = 253/321 (78%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+ RHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSRRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP++VVGVVGYV TPRGLRS  TV+A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMIVVGVVGYVNTPRGLRSFKTVFAEHMSDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ ++GKK ++     MKKYC VIR              KKAHL
Sbjct: 121 NWYKSKKKAFTKYCKKWQDEEGKKQLEKDFAAMKKYCQVIRVICHTQMRMLPLRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           ME+QVNGG+++ KVD+A    E+ + ++ VF +DEMIDIIGVTKG GY+GV +RW   +L
Sbjct: 181 MEVQVNGGTISDKVDWAREKLEQAVLVNNVFTQDEMIDIIGVTKGHGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+   +       
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYHQKDGKLVK 300

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           ++A TE+D S   ++  MG F
Sbjct: 301 NNASTEYDLSNKSINP-MGGF 320


>gi|432867474|ref|XP_004071207.1| PREDICTED: 60S ribosomal protein L3-like [Oryzias latipes]
          Length = 403

 Score =  426 bits (1095), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 203/319 (63%), Positives = 251/319 (78%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGK K+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKCKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VVVGV GYV TPRGLRS  T++A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGVTGYVSTPRGLRSFKTIFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ ++GKK ++     MKKYC VIR              KK+HL
Sbjct: 121 NWYKSKKKAFTKYCKKWQDEEGKKQLEKDFASMKKYCQVIRVIAHTQMRLLPLKQKKSHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           ME+Q+NGG+++ KVD+A    E+ +P++ VF +DEMID+IGVTKG GY+GV +RW   +L
Sbjct: 181 MEVQLNGGTISDKVDWAREKLEQAVPVNTVFTQDEMIDVIGVTKGHGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYHTKDGKVVK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A TE+D S   ++ L G
Sbjct: 301 NNASTEYDLSNKSINPLGG 319


>gi|332028947|gb|EGI68965.1| 60S ribosomal protein L3 [Acromyrmex echinatior]
          Length = 484

 Score =  426 bits (1095), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 203/321 (63%), Positives = 254/321 (79%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP  LTAF+GYKAGMTH+VR+ 
Sbjct: 71  MSHRKFSAPRHGSMGFYPKKRSQRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREA 130

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP++VVG+VGY++TP GLR+L TVWA+HL+E+ RRRFYK
Sbjct: 131 DRPGSKVNKKEIVEAVTILETPPMIVVGLVGYIETPHGLRALATVWAEHLSEDCRRRFYK 190

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTK +KK++ D G+K I+A L+K+KKYC+V+R              KKAH+
Sbjct: 191 NWYKSKKKAFTKASKKWQDDLGRKSIEADLKKIKKYCSVVRIIAHTQMKLLRQRQKKAHI 250

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG++  KV +A    EK +PI +VF  DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 251 MEIQLNGGTIEDKVQWAREHLEKPVPISSVFASDEMIDVIGVTKGKGYKGVTSRWHTKKL 310

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G+           
Sbjct: 311 PRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGKIVK 370

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           ++A TE+D +   ++  MG F
Sbjct: 371 NNASTEYDLTDKSITP-MGGF 390


>gi|336263974|ref|XP_003346766.1| 60S ribosomal protein L3 [Sordaria macrospora k-hell]
 gi|380091473|emb|CCC10969.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 392

 Score =  426 bits (1094), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 203/315 (64%), Positives = 250/315 (79%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSL +LPRKRA+RHRGKVK+FPKDD  KP  LTA +GYKAGMT IVRD+
Sbjct: 1   MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDAKKPVHLTAAMGYKAGMTTIVRDM 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+K HKKE  EAVTII+TPP++VVG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGAKAHKKEVVEAVTIIDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK+  ++G   I  +LE++KKYCTV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYVKKHSDNNGAA-ITRELERIKKYCTVVRVLAHTQIRKTPLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGGS+A KV+F +G FEK + ID++F+KDE+ID+I VTKG G+ GV  RWG  +L
Sbjct: 180 MEIQINGGSIADKVEFGHGLFEKPVSIDSIFEKDEVIDVIAVTKGHGFTGVTARWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N KIY++GKA  E  SA TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPSHVQWTVARAGQAGYHHRTSVNHKIYRIGKAGAED-SAATE 298

Query: 287 FDRSVYLLSSLMGSF 301
            D +   ++  MG F
Sbjct: 299 VDVTKKKITP-MGGF 312


>gi|337580|gb|AAA60291.1| ribosomal protein L3, partial [Homo sapiens]
          Length = 398

 Score =  426 bits (1094), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 205/314 (65%), Positives = 252/314 (80%), Gaps = 20/314 (6%)

Query: 6   FEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGS 65
           F  PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V++PGS
Sbjct: 1   FSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGS 60

Query: 66  KLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKS 125
           K++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  TV+A+H+++E +RRFYKNW KS
Sbjct: 61  KVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNWHKS 120

Query: 126 KKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLMEIQV 171
           KKKAFTKY KK++ +DGKK ++     MKKYC VIR              KKAHLMEIQV
Sbjct: 121 KKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHLMEIQV 180

Query: 172 NGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 231
           NGG+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW   +LPRKTH
Sbjct: 181 NGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTH 240

Query: 232 RGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQESHSAMT 285
           RGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           ++A T
Sbjct: 241 RGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNAST 300

Query: 286 EFDRSVYLLSSLMG 299
           ++D S   ++ L G
Sbjct: 301 DYDLSDKSINPLGG 314


>gi|367035414|ref|XP_003666989.1| hypothetical protein MYCTH_2312253 [Myceliophthora thermophila ATCC
           42464]
 gi|347014262|gb|AEO61744.1| hypothetical protein MYCTH_2312253 [Myceliophthora thermophila ATCC
           42464]
          Length = 391

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 202/315 (64%), Positives = 251/315 (79%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSL +LPRKRA+RHRGKVK+FPKDDP KP  LTA +GYKAGMT IVRD+
Sbjct: 1   MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+K HKKE  EAVTII+TPP+VVVG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGAKAHKKEVVEAVTIIDTPPMVVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK+  ++G   I  +LE++KKYCTV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKKHSENNGAA-ITRELERIKKYCTVVRVLAHTQIRKTPLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG+VA+KVDF +G FEK + ID +F+KDE+ID+I VTKG G+ GV  RWG  +L
Sbjct: 180 MEIQINGGTVAEKVDFGHGLFEKPVSIDTIFEKDEIIDVIAVTKGHGFTGVTARWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N KIY++GK   + ++A T+
Sbjct: 240 PRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKIYRIGKGDADDNAA-TD 298

Query: 287 FDRSVYLLSSLMGSF 301
            D +   ++  MG F
Sbjct: 299 VDVTKKKITP-MGGF 312


>gi|291223744|ref|XP_002731867.1| PREDICTED: ribosomal protein L3-like [Saccoglossus kowalevskii]
          Length = 404

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 204/319 (63%), Positives = 248/319 (77%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+ RHRGKVKAFPKDD SKPC LTAF+GYKAGMTHIVR V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSRRHRGKVKAFPKDDQSKPCHLTAFVGYKAGMTHIVRQV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  E VTIIETPPL+VVGVVGY+ TPRG R+L T+WA+HLNEE RRRFYK
Sbjct: 61  DRPGSKVNKKEVVEPVTIIETPPLMVVGVVGYIDTPRGQRTLKTIWAEHLNEECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW ++KKKAFTK +KK+  D GK+ I+     MKKYC VIR              KKAH+
Sbjct: 121 NWYRAKKKAFTKASKKWGDDGGKQAIEKDFNAMKKYCKVIRILAHTQMRLMNQRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           +EIQ+NGG++A+KVD+A    E QIP+  VF +DEMID+IGVTKGKG++GV +RWG  +L
Sbjct: 181 IEIQINGGTIAEKVDWAREKLESQIPVTQVFVQDEMIDVIGVTKGKGFKGVTSRWGTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHPARV + VARAGQ GYHHRTE+NKK+Y++G            
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVGYGVARAGQKGYHHRTELNKKVYRIGAGIHTKDGKVIK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A TE+D++   ++ L G
Sbjct: 301 NNAATEYDQTDKDITPLGG 319


>gi|344228878|gb|EGV60764.1| 60S ribosomal protein L3 [Candida tenuis ATCC 10573]
          Length = 388

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 204/315 (64%), Positives = 248/315 (78%), Gaps = 18/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSLGFLPRKRA+RH+GK+K+FPKD+ SKP  LTAFLGYKAGMT +VRD+
Sbjct: 1   MSHRKFEAPRHGSLGFLPRKRAARHQGKIKSFPKDNKSKPVSLTAFLGYKAGMTTVVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  EA T+++TPPLV+VGVVGYV+TPRGLRSL TVWA+HL+EE+RRRFYK
Sbjct: 61  DRPGSKMHKREVVEAATVVDTPPLVIVGVVGYVETPRGLRSLTTVWAEHLSEEIRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY+ KY  D     I+ +L ++ KY +V+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYSGKYAKDPA--SIERELARINKYASVVRVLAHTQIKKTPLSQKKAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQ+NGGSVA KV +A   FEK + +D+VF+  EMID I VTKG G+EGV  RWG  +L
Sbjct: 179 AEIQINGGSVADKVAWAQEHFEKTVSVDSVFEDGEMIDAIAVTKGHGFEGVTHRWGTKKL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPA V++TVARAGQNGYHHRT +N K+Y++GKA  ES S  T 
Sbjct: 239 PRKTHRGLRKVACIGAWHPANVNWTVARAGQNGYHHRTSINHKVYRVGKAGDES-SGATS 297

Query: 287 FDRSVYLLSSLMGSF 301
           +DR+V  ++  MG F
Sbjct: 298 YDRTVKNINP-MGGF 311


>gi|402854487|ref|XP_003891900.1| PREDICTED: 60S ribosomal protein L3-like [Papio anubis]
          Length = 403

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 205/319 (64%), Positives = 254/319 (79%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHI+R+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIMREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  TV+A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVI--------------RKKAHL 166
           NW KSKKKAFTKY KK++ +DGKK ++     MKKYC VI              +KKAHL
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIHVIAHTQMRLLPLRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVN G+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQVNRGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQES 280
           PRKTHRGL KVACIGAWHPA V+F+VARAGQ GYHHRTE+NKKIYK+G+           
Sbjct: 241 PRKTHRGLHKVACIGAWHPAHVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   ++ L G
Sbjct: 301 NNASTDYDLSDKSINPLGG 319


>gi|359745329|gb|AEV57601.1| 60S ribosomal protein L3 [Muraenesox cinereus]
          Length = 403

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 203/319 (63%), Positives = 251/319 (78%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+ RHRGKVK+FP+DD +KP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSRRHRGKVKSFPRDDATKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP++VVGVVGYV+TPRGLRS  T++A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMIVVGVVGYVQTPRGLRSFKTIFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ D+GKK ++     MKKYC V+R              KK+HL
Sbjct: 121 NWYKSKKKAFTKYCKKWQDDEGKKQLEKDFAAMKKYCQVVRIIAHTQMRLLPLRQKKSHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           ME+Q+NGGS+A KVD+A    E+ +PI  VF +DEMID+IGVTKG GY+GV +RW   +L
Sbjct: 181 MEVQLNGGSIADKVDWAREKLEQAVPITNVFTQDEMIDVIGVTKGHGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYHTKDGKVVK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A TE+D S   ++ L G
Sbjct: 301 NNAATEYDLSNKSITPLGG 319


>gi|237834163|ref|XP_002366379.1| 60S ribosomal protein L3, putative [Toxoplasma gondii ME49]
 gi|211964043|gb|EEA99238.1| 60S ribosomal protein L3, putative [Toxoplasma gondii ME49]
 gi|221486606|gb|EEE24867.1| 60S ribosomal protein L3, putative [Toxoplasma gondii GT1]
 gi|221508362|gb|EEE33949.1| 60S ribosomal protein L3, putative [Toxoplasma gondii VEG]
          Length = 389

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 206/315 (65%), Positives = 249/315 (79%), Gaps = 19/315 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSLGFLPRKR  RHRGKVKAFPKDDPSKP  LTAF+GYKAGMTH+VR++
Sbjct: 1   MSHRKFERPRHGSLGFLPRKRCKRHRGKVKAFPKDDPSKPPHLTAFMGYKAGMTHVVREL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           +KPGSKLHKKE  EAVT+++TPP+V VGVVGY++TPRGLR+L TVWA HL++E +RRFYK
Sbjct: 61  DKPGSKLHKKEIVEAVTVVDTPPMVCVGVVGYIETPRGLRALVTVWAGHLSDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSK+KAFTKY K+Y  ++    ++A+L +MK YC+VIR              KKAH+
Sbjct: 121 NWYKSKRKAFTKYAKRYGDNN---KMEAELTRMKNYCSVIRAICHTQPSKTPIGSKKAHV 177

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGS+A+KVDF    FE  +P+ AVF + EMID+IGVTKG G +GVV+RWGVTRL
Sbjct: 178 MEIQVNGGSIAEKVDFCTKMFETAVPVKAVFTEGEMIDVIGVTKGHGVKGVVSRWGVTRL 237

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRK+ACIGAWHPARV F V R GQ GY HRTEMNKK+Y++G  + +  +A TE
Sbjct: 238 PRKTHRGLRKIACIGAWHPARVQFQVPRHGQKGYFHRTEMNKKVYRVGNGA-DPRNATTE 296

Query: 287 FDRSVYLLSSLMGSF 301
            D +   ++  MG F
Sbjct: 297 SDLTEKRITP-MGGF 310


>gi|393246426|gb|EJD53935.1| 60S ribosomal protein L3 [Auricularia delicata TFB-10046 SS5]
          Length = 388

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 211/315 (66%), Positives = 259/315 (82%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSLGFLPRKRA+RHRGKVK+FP+DDP KP  LTAF+GYKAGMTH+VRD+
Sbjct: 1   MSHRKYEAPRHGSLGFLPRKRAARHRGKVKSFPRDDPKKPVHLTAFMGYKAGMTHVVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           E+PGSK+HKKE  EAVTI+ETPPLVVVGVVGYV+TPRGLR+L TVWA HL++E++RRFYK
Sbjct: 61  ERPGSKMHKKEIVEAVTIVETPPLVVVGVVGYVETPRGLRTLTTVWASHLSDELKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW +SKKKAFT+Y KK   +DG K +  +LE+++KY TV+R              KKAHL
Sbjct: 121 NWYRSKKKAFTRYAKK-SAEDGGKSVSRELERIRKYATVVRVLAHTQIRKTGLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGS+A KV+FA+G FEK + I+AVF++DE+IDII VTKG G+EGV  RWG  +L
Sbjct: 180 MEIQVNGGSIADKVEFAHGLFEKTVDINAVFEQDEVIDIIAVTKGHGFEGVTHRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE+NKKIY++GK   ++ +A TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTEINKKIYRIGKGD-DAANASTE 298

Query: 287 FDRSVYLLSSLMGSF 301
            D +   ++  MG F
Sbjct: 299 ADVTKKAITP-MGGF 312


>gi|164424622|ref|XP_963317.2| 60S ribosomal protein L3 [Neurospora crassa OR74A]
 gi|30580497|sp|P59671.1|RL3_NEUCR RecName: Full=60S ribosomal protein L3
 gi|28881190|emb|CAD70371.1| probable 60s ribosomal protein l3 (rpl3) [Neurospora crassa]
 gi|157070591|gb|EAA34081.2| 60S ribosomal protein L3 [Neurospora crassa OR74A]
 gi|336468587|gb|EGO56750.1| hypothetical protein NEUTE1DRAFT_95379 [Neurospora tetrasperma FGSC
           2508]
 gi|350289142|gb|EGZ70367.1| putative 60s ribosomal protein l3 [Neurospora tetrasperma FGSC
           2509]
          Length = 392

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 203/315 (64%), Positives = 249/315 (79%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSL +LPRKRA+RHRGKVK+FPKDD  KP  LTA +GYKAGMT IVRD+
Sbjct: 1   MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDAKKPVHLTAAMGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+K HKKE  EAVTII+TPP++VVG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGAKAHKKEVVEAVTIIDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK+  ++G   I  +LE++KKYCTV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYVKKHSDNNGAA-ITRELERIKKYCTVVRVLAHTQIRKTPLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGGSVA KV+F +G FEK + ID++F+KDE+ID+I VTKG G+ GV  RWG  +L
Sbjct: 180 MEIQINGGSVADKVEFGHGLFEKPVSIDSIFEKDEVIDVIAVTKGHGFTGVTARWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N KIY++GK   E  SA TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPSHVQWTVARAGQAGYHHRTSVNHKIYRIGKGDAED-SAATE 298

Query: 287 FDRSVYLLSSLMGSF 301
            D +   ++  MG F
Sbjct: 299 VDVTKKKITP-MGGF 312


>gi|401409462|ref|XP_003884179.1| 60S ribosomal protein L3, related [Neospora caninum Liverpool]
 gi|325118597|emb|CBZ54148.1| 60S ribosomal protein L3, related [Neospora caninum Liverpool]
          Length = 398

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 206/315 (65%), Positives = 249/315 (79%), Gaps = 19/315 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSLGFLPRKR  RHRGKVKAFPKDDPSKP  LTAF+GYKAGMTH+VR++
Sbjct: 1   MSHRKFERPRHGSLGFLPRKRCKRHRGKVKAFPKDDPSKPPHLTAFMGYKAGMTHVVREL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           +KPGSKLHKKE  EAVT+++TPP+V VGVVGY++TPRGLR+L TVWA HL++E +RRFYK
Sbjct: 61  DKPGSKLHKKEIVEAVTVVDTPPMVCVGVVGYIETPRGLRALVTVWAGHLSDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSK+KAFTKY K+Y  ++    ++A+L +MK YC+VIR              KKAH+
Sbjct: 121 NWYKSKRKAFTKYAKRYGDNN---KMEAELTRMKNYCSVIRAICHTQPSKTPIGSKKAHV 177

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGSVA+KVDF    FE  +P+ AVF + EM+D+IGVTKG G +GVV+RWGVTRL
Sbjct: 178 MEIQVNGGSVAEKVDFCTKMFETAVPVKAVFTEGEMLDVIGVTKGHGVKGVVSRWGVTRL 237

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRK+ACIGAWHPARV F V R GQ GY HRTEMNKK+Y++G  + +  +A TE
Sbjct: 238 PRKTHRGLRKIACIGAWHPARVQFQVPRHGQKGYFHRTEMNKKVYRVGNGA-DPRNATTE 296

Query: 287 FDRSVYLLSSLMGSF 301
            D +   ++  MG F
Sbjct: 297 SDLTEKRITP-MGGF 310


>gi|255071333|ref|XP_002507748.1| ribosomal protein L3 [Micromonas sp. RCC299]
 gi|226523023|gb|ACO69006.1| ribosomal protein L3 [Micromonas sp. RCC299]
          Length = 385

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 218/316 (68%), Positives = 251/316 (79%), Gaps = 20/316 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPR G LGFLP+KR+ R RGK K FP+DD SK   LTAF+G+KAGMTH+VRDV
Sbjct: 1   MSHRKFEHPRLGHLGFLPKKRSQRARGKCKKFPRDDASKEPHLTAFMGFKAGMTHVVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           +KPGSKLHKKET EAVTI+ETP +VVVGVVGYVKTP+GLR+L TVWA+HLN+E+RRRFYK
Sbjct: 61  DKPGSKLHKKETLEAVTIVETPAMVVVGVVGYVKTPQGLRALNTVWAEHLNDEIRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NW KSKKKAFTKY KKY        IQ +L+ ++K   V+R               KKAH
Sbjct: 121 NWFKSKKKAFTKYAKKYTNG----TIQQELDNLRKNADVVRVIAHTQVRKVKNLKQKKAH 176

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           +MEIQVNGG  A KVDFAY FFEK IP+DAVF KDEMID I V+KGKG+EGVVTRWGVTR
Sbjct: 177 VMEIQVNGGDAAAKVDFAYKFFEKAIPVDAVFNKDEMIDCISVSKGKGFEGVVTRWGVTR 236

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTHRGLRKV CIGAWHPARV+FTVAR GQ+GYHHRTE+NKKIY++GK  ++SH A T
Sbjct: 237 LPRKTHRGLRKVGCIGAWHPARVAFTVARPGQHGYHHRTEINKKIYRVGKEGEDSHKATT 296

Query: 286 EFDRSVYLLSSLMGSF 301
           E D +   ++  MG F
Sbjct: 297 EHDATDKDITP-MGGF 311


>gi|440635244|gb|ELR05163.1| hypothetical protein GMDG_07204 [Geomyces destructans 20631-21]
          Length = 606

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 200/315 (63%), Positives = 250/315 (79%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSL +LPRKRA+RHRGKVK+FPKDD  KP  LTA +GYKAGMT IVRD+
Sbjct: 1   MSHRKFEAPRHGSLAYLPRKRAARHRGKVKSFPKDDAKKPVHLTATMGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+K HKKE  EAVT+IETPP++VVG+VGY++TPRGLRSL TVWA+HL+++++RRFYK
Sbjct: 61  DRPGAKSHKKEVVEAVTVIETPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDDLKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK+    G   I  +LE++KKYCTV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKKHSEASG-SSITRELERIKKYCTVVRVLAHTQIRKTPLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           ME+Q+NGGSVA+KV+FA G FEK + + ++F++DEMID+I VTKGKG+ GV +RWG  +L
Sbjct: 180 MEVQINGGSVAEKVEFASGLFEKPVEVASIFEQDEMIDVIAVTKGKGFSGVTSRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP+ V +TVARAGQ+GYHHRT  N K+Y++G  + E + A TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPSHVQWTVARAGQDGYHHRTSCNHKVYRVGSGTDEGN-ASTE 298

Query: 287 FDRSVYLLSSLMGSF 301
           FD S   ++  MG F
Sbjct: 299 FDVSKKTITP-MGGF 312


>gi|412994087|emb|CCO14598.1| 60S ribosomal protein L3 [Bathycoccus prasinos]
          Length = 413

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 203/309 (65%), Positives = 246/309 (79%), Gaps = 20/309 (6%)

Query: 8   HPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKL 67
           +PR G LGFLP+KR+ R RGKVK+FPKDD SKP   TAF+G+KAGMTHIVRDV+KPGSKL
Sbjct: 36  NPRLGHLGFLPKKRSQRSRGKVKSFPKDDASKPPHFTAFMGFKAGMTHIVRDVDKPGSKL 95

Query: 68  HKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKK 127
           HKKETCEAVTI+E P ++VVG+VGY +TP+GLR + TVWA+HL++E++RRFYKNW KSKK
Sbjct: 96  HKKETCEAVTIVECPQMIVVGLVGYRRTPQGLRGVKTVWAEHLSDEIKRRFYKNWFKSKK 155

Query: 128 KAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAHLMEIQVN 172
           KAF KY KKY        I+  LE +KK C V+R               KKAH+MEIQ+N
Sbjct: 156 KAFQKYAKKYSNGS----IEQDLEALKKSCDVVRVIAHTQVRKVKNLKQKKAHMMEIQIN 211

Query: 173 GGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR 232
           GGSVA KVDF + FFEK +P+DAVFQ+DEMID+I VTKGKG+EGV+TRWGVTRLPRKTHR
Sbjct: 212 GGSVADKVDFGFKFFEKAVPVDAVFQQDEMIDVIAVTKGKGFEGVITRWGVTRLPRKTHR 271

Query: 233 GLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRSVY 292
           GLRKVACIG+WHPARV+++VAR GQ+GYHHRTE+NKKIYK+GKA + S  A T+ D +  
Sbjct: 272 GLRKVACIGSWHPARVAYSVARPGQHGYHHRTEINKKIYKIGKADEASFGANTDHDPTEK 331

Query: 293 LLSSLMGSF 301
            ++  MG F
Sbjct: 332 EITP-MGGF 339


>gi|345565030|gb|EGX47986.1| hypothetical protein AOL_s00081g313 [Arthrobotrys oligospora ATCC
           24927]
          Length = 390

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 205/315 (65%), Positives = 250/315 (79%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSLGFLPRKRA+RHRG+ KAFPKD+  KP  LTA LGYKAGMT IVRD+
Sbjct: 1   MSHRKYEAPRHGSLGFLPRKRAARHRGRCKAFPKDNAKKPVHLTAALGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+K+HKKE  EAVT+IETPP++ VGVVGY++TPRGLRSL TVWA HL++E+RRRFYK
Sbjct: 61  DRPGAKMHKKEIVEAVTVIETPPMIAVGVVGYIETPRGLRSLTTVWAAHLSDEIRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK+   +G   I+  LE++KKYCTV+R              KKAH+
Sbjct: 121 NWYKSKKKAFTKYAKKHSETNGSA-IERDLERIKKYCTVVRLIAHTQIRKTPLKQKKAHM 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGGS+A+KVDFA   FEK I I ++F+KDE+IDIIGVTKG G+ GV +RWG  +L
Sbjct: 180 MEIQINGGSIAEKVDFAKNLFEKPIEIPSIFEKDEVIDIIGVTKGHGFNGVTSRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHPA V +TVARAGQ GYHHRT +N KIY++G  S + ++A TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPAHVQWTVARAGQYGYHHRTSVNHKIYRVGLGS-DPNNASTE 298

Query: 287 FDRSVYLLSSLMGSF 301
           +D S   ++  MG F
Sbjct: 299 YDVSNKTITP-MGGF 312


>gi|315051194|ref|XP_003174971.1| 60S ribosomal protein L3 [Arthroderma gypseum CBS 118893]
 gi|311340286|gb|EFQ99488.1| 60S ribosomal protein L3 [Arthroderma gypseum CBS 118893]
          Length = 412

 Score =  424 bits (1089), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 201/315 (63%), Positives = 249/315 (79%), Gaps = 19/315 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSL +LPRKRA+RHRGKVK+FPKDDP KP  LTA +GYKAGMT IVRD+
Sbjct: 23  MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTATMGYKAGMTTIVRDL 82

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           E+PG+K+H+KE  EAVTI+ETPP++ VG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 83  ERPGAKMHRKEIVEAVTIVETPPMIAVGIVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 142

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFT+Y K   T         +LE++K YCTV+R              KKAHL
Sbjct: 143 NWYKSKKKAFTRYAK---THADAASTTRELERIKNYCTVVRLLAHTQIRKTPLKQKKAHL 199

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           ME+QVNGGSVA+KV+FA+G FEK I +D+VF+KDE++D+I VTKG G+ GV +RWG  +L
Sbjct: 200 MEVQVNGGSVAEKVEFAHGLFEKPIDVDSVFEKDEVVDVIAVTKGHGFSGVTSRWGTKKL 259

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP+ V +TVARAGQ+GYHHRT  N KIY++GKA  E  +A T+
Sbjct: 260 PRKTHKGLRKVACIGAWHPSHVQWTVARAGQDGYHHRTSANHKIYRIGKADDEG-NASTD 318

Query: 287 FDRSVYLLSSLMGSF 301
           FD S   ++  MG F
Sbjct: 319 FDVSKKRITP-MGGF 332


>gi|340522512|gb|EGR52745.1| hypothetical protein TRIREDRAFT_73765 [Trichoderma reesei QM6a]
          Length = 391

 Score =  424 bits (1089), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 200/313 (63%), Positives = 247/313 (78%), Gaps = 16/313 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSL +LPRKRA+RHRGKVK+FPKDDP KP  LTA +GYKAGMT IVRD+
Sbjct: 1   MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+K HKKE  EAV+II+TPP++VVG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGAKAHKKEVVEAVSIIDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK+ +D+    I  +LE++KKYCTV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKKH-SDNSGASINRELERIKKYCTVVRILAHTQIRKTPLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGSVA KVDFA   FEK + +D +F++DE+ID+I VTKG G+ GV  RWG  +L
Sbjct: 180 MEIQVNGGSVADKVDFAKDLFEKPVSVDTIFEQDEVIDVIAVTKGHGFSGVTARWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++GK   E  SA T+
Sbjct: 240 PRKTHKGLRKVACIGAWHPSHVQWTVARAGQEGYHHRTSVNHKVYRIGKGDAED-SASTD 298

Query: 287 FDRSVYLLSSLMG 299
            D +   ++ L G
Sbjct: 299 VDVTKKKITPLGG 311


>gi|148235098|ref|NP_001091345.1| uncharacterized protein LOC100037184 [Xenopus laevis]
 gi|125858902|gb|AAI29593.1| LOC100037184 protein [Xenopus laevis]
          Length = 405

 Score =  423 bits (1088), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 219/326 (67%), Positives = 256/326 (78%), Gaps = 26/326 (7%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSLGFLPRKR  RHRGKVK+FP+DD SKPC LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEAPRHGSLGFLPRKRTRRHRGKVKSFPRDDASKPCHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSK-LHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFY 119
            +PGSK LH KE  EAVTIIETPP+VVVGVVGYV TPRGLR+L TVWAQ+L+EE +RRFY
Sbjct: 61  IRPGSKALHNKEIVEAVTIIETPPMVVVGVVGYVATPRGLRALTTVWAQNLSEECKRRFY 120

Query: 120 KNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR------------------ 161
           K W KSKKKAFTKY KKYETD GKK+I  +LE++KKYC+V+R                  
Sbjct: 121 KTWYKSKKKAFTKYAKKYETDAGKKEIDHELERIKKYCSVVRVIAHTQMSKMRGARADRQ 180

Query: 162 KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRW 221
           +KAH+ME+QVNGGSVA KVDFA G FE+Q+P+ +VF ++E +DII VTKGKG+EGV  RW
Sbjct: 181 RKAHIMEVQVNGGSVADKVDFARGLFEQQVPVKSVFGQNENVDIIAVTKGKGFEGVTFRW 240

Query: 222 GVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE-- 279
           GV +L RKTHRGLRKVACIGAWHPARV FTV RAGQNGYHHRTE+NKKIY++G       
Sbjct: 241 GVKKLQRKTHRGLRKVACIGAWHPARVGFTVPRAGQNGYHHRTELNKKIYRIGDGIHTKD 300

Query: 280 ----SHSAMTEFDRSVYLLSSLMGSF 301
                ++A T++D +   ++  MG F
Sbjct: 301 GKVVKNNASTDYDLTEKSITP-MGGF 325


>gi|440903024|gb|ELR53738.1| 60S ribosomal protein L3, partial [Bos grunniens mutus]
          Length = 402

 Score =  423 bits (1088), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 204/318 (64%), Positives = 252/318 (79%), Gaps = 20/318 (6%)

Query: 2   SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
           SHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP  LTAFLGYKAGMTHIVR+V+
Sbjct: 1   SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREVD 60

Query: 62  KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
           +PGSK++KKE  EAVTI+ETPP+V+VG+VGYV+TPRGLR+  T++A+H+++E +RRFYKN
Sbjct: 61  RPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYKN 120

Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLM 167
           W KSKKKAFTKY KK++  DGKK ++     MKKYC VIR              KKAHLM
Sbjct: 121 WHKSKKKAFTKYCKKWQDADGKKQLERDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHLM 180

Query: 168 EIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 227
           E+QVNGG+VA+K+D+A    E+Q+P+  VF +DEMID+IGVTKGKGY+GV +RW   +LP
Sbjct: 181 EVQVNGGTVAEKLDWARERLEQQVPVSQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP 240

Query: 228 RKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQESH 281
           RKTHRGLRKVACIGAWHPA V+F+VARAGQ GYHHRTE+NKKIYK+G+           +
Sbjct: 241 RKTHRGLRKVACIGAWHPAWVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKN 300

Query: 282 SAMTEFDRSVYLLSSLMG 299
           +A T++D S   ++ L G
Sbjct: 301 NASTDYDLSDKSINPLGG 318


>gi|119580720|gb|EAW60316.1| ribosomal protein L3, isoform CRA_g [Homo sapiens]
          Length = 286

 Score =  423 bits (1088), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 200/283 (70%), Positives = 239/283 (84%), Gaps = 14/283 (4%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  TV+A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ +DGKK ++     MKKYC VIR              KKAHL
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK 269
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKK 283


>gi|319079393|ref|NP_001187033.1| ribosomal protein L3 [Ictalurus punctatus]
 gi|15293867|gb|AAK95126.1|AF401554_1 ribosomal protein L3 [Ictalurus punctatus]
          Length = 402

 Score =  423 bits (1088), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 204/319 (63%), Positives = 254/319 (79%), Gaps = 21/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKRA+  RGKVK+FPKDDP+KP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRAA-SRGKVKSFPKDDPTKPVHLTAFLGYKAGMTHIVREV 59

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP++VVG+VGYV+TPRGLRS  TV+A+H+++E RRRFYK
Sbjct: 60  DRPGSKVNKKEVVEAVTIVETPPMMVVGIVGYVETPRGLRSFKTVFAEHISDECRRRFYK 119

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY+KK++ D+GKK ++     MKKYC VIR              KK+HL
Sbjct: 120 NWYKSKKKAFTKYSKKWQDDEGKKQLEKDFSSMKKYCKVIRIIAHTQMRLLPLRQKKSHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG++++KVD+A    E+ +PI+ VF +DEMID+IGVTKG GY+GV +RW   +L
Sbjct: 180 MEIQLNGGTISEKVDWAREKLEQAVPINNVFSQDEMIDVIGVTKGHGYKGVTSRWHTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           
Sbjct: 240 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEVNKKIYKIGQGYHTKDGKVIK 299

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   ++ L G
Sbjct: 300 NNASTDYDLSNKSINPLGG 318


>gi|341038755|gb|EGS23747.1| 60S ribosomal protein L3-like protein [Chaetomium thermophilum var.
           thermophilum DSM 1495]
          Length = 392

 Score =  423 bits (1088), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 204/315 (64%), Positives = 247/315 (78%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSL FLPRKRA+RHRG+VK+FPKDDP KP  LTA +GYKAGMT IVRD+
Sbjct: 1   MSHRKYEAPRHGSLAFLPRKRAARHRGRVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+K HKKE  EAVTII+ PP+VVVG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGAKAHKKEVVEAVTIIDCPPMVVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KKY  ++G   I  +LE++KKYCTV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKKYAENNG-ASITRELERIKKYCTVVRVLAHTQIRKTPLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGGSVA KV+F    FEK + ID +F+KDEMID+I VTKG G+ GV  RWG  +L
Sbjct: 180 MEIQINGGSVADKVEFGRSLFEKPVTIDTIFEKDEMIDVIAVTKGHGFVGVTARWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N KIY++GK   E+ +A TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKIYRIGKGDDEA-NASTE 298

Query: 287 FDRSVYLLSSLMGSF 301
            D +   ++  MG F
Sbjct: 299 TDLTKKKITP-MGGF 312


>gi|116204627|ref|XP_001228124.1| 60S ribosomal protein L3 [Chaetomium globosum CBS 148.51]
 gi|88176325|gb|EAQ83793.1| 60S ribosomal protein L3 [Chaetomium globosum CBS 148.51]
          Length = 392

 Score =  423 bits (1087), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 201/315 (63%), Positives = 248/315 (78%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSL +LPRKRA+RHRGKVK+FPKDD  KP  LTA +GYKAGMT IVRD+
Sbjct: 1   MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDAKKPVHLTAAMGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+K HKKE  EAVTII+TPP++VVG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGAKAHKKEVVEAVTIIDTPPMMVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK+  + G   I  +LE++KKYCTV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKKHSENSG-ASITRELERIKKYCTVVRVLAHTQIRKTPLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGGSVA KV+F +G FEK + +D++F+KDEMID+I VTKG G+ GV  RWG  +L
Sbjct: 180 MEIQINGGSVADKVEFGHGLFEKPVSVDSIFEKDEMIDVIAVTKGHGFSGVTARWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++GK   +  SA TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKVYRIGKGDADD-SAATE 298

Query: 287 FDRSVYLLSSLMGSF 301
            D +   ++  MG F
Sbjct: 299 IDVTKKKITP-MGGF 312


>gi|358055153|dbj|GAA98922.1| hypothetical protein E5Q_05610 [Mixia osmundae IAM 14324]
          Length = 387

 Score =  423 bits (1087), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 212/315 (67%), Positives = 256/315 (81%), Gaps = 18/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSLGFLPRKRA+RHRGKVKAFPKDDP KP  LTAF+GYKAGMTHIVR++
Sbjct: 1   MSHRKYEAPRHGSLGFLPRKRAARHRGKVKAFPKDDPKKPVHLTAFMGYKAGMTHIVREL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           E+PGSK+HKKE  EAVTIIETPP+ VVGVVGYV+TPRGLRSL TVWA+HL++E++RRFYK
Sbjct: 61  ERPGSKMHKKEIVEAVTIIETPPVNVVGVVGYVETPRGLRSLTTVWAEHLSDELKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW +SKKKAFTKY KK+   +G   +  ++E++KKYCTV+R              KKAHL
Sbjct: 121 NWYRSKKKAFTKYAKKHA--EGGASVSREMERIKKYCTVVRVLAHTQIRKTGLKQKKAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGGS+A KVDFA   FEK I + AVF++D+ IDIIGVTKGKG+EGV  RWG  +L
Sbjct: 179 MEIQINGGSIADKVDFAKSHFEKPIEVSAVFEQDQNIDIIGVTKGKGFEGVTHRWGTKKL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE NKKIY++G  + +  +A TE
Sbjct: 239 PRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTEKNKKIYRIGSGADDK-NASTE 297

Query: 287 FDRSVYLLSSLMGSF 301
           +D +   ++  MG F
Sbjct: 298 YDTTSKAITP-MGGF 311


>gi|410903147|ref|XP_003965055.1| PREDICTED: 60S ribosomal protein L3-like [Takifugu rubripes]
          Length = 403

 Score =  423 bits (1087), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 201/319 (63%), Positives = 249/319 (78%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+ RHRGK K+FPKDDPSKP  +TAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSRRHRGKAKSFPKDDPSKPVHMTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VV+GVVGYV TP GLRS  T++A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVIGVVGYVNTPSGLRSFKTIFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ D+GKK ++     MKKYC VIR              KK+HL
Sbjct: 121 NWYKSKKKAFTKYCKKWQDDEGKKQLEKDFNLMKKYCQVIRVITHTQMRLLPIRQKKSHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           ME+Q+NGG+++ KVD+A    E+ IPI+ VF +DEMID+IG+TKG GY+GV +RW   +L
Sbjct: 181 MEVQLNGGTISDKVDWAREKLEQSIPINTVFTQDEMIDVIGITKGHGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESH----- 281
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGFHTKDGKLVK 300

Query: 282 -SAMTEFDRSVYLLSSLMG 299
            +A T++D S   ++ L G
Sbjct: 301 SNASTDYDLSNKSINPLGG 319


>gi|406864005|gb|EKD17051.1| 60S ribosomal protein L3 [Marssonina brunnea f. sp. 'multigermtubi'
           MB_m1]
          Length = 392

 Score =  422 bits (1086), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 199/302 (65%), Positives = 242/302 (80%), Gaps = 16/302 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSL +LPRKRA+RHRGKVK+FPKDDP KP  LTA +GYKAGMT IVRD+
Sbjct: 1   MSHRKFEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTATMGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+K HKKE  EAVT+IETPP++VVG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGAKTHKKEVVEAVTVIETPPVIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW +SKKKAFTKY KK+    G   I  +LE++KKYCTV+R              KKAHL
Sbjct: 121 NWYRSKKKAFTKYAKKHSESSG-SSITRELERIKKYCTVVRVLAHTQIRKTPLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGSVA KV+F +G FEK + I ++F++DEMID+I VTKG G+ GV +RWG  +L
Sbjct: 180 MEIQVNGGSVADKVEFGHGLFEKPVEISSIFEQDEMIDVIAVTKGHGFSGVTSRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP  V +TVARAGQ+GYHHRT  N K+Y++GK   E  +A T+
Sbjct: 240 PRKTHKGLRKVACIGAWHPCHVQWTVARAGQDGYHHRTSCNHKVYRIGKGDDEG-NATTD 298

Query: 287 FD 288
           FD
Sbjct: 299 FD 300


>gi|66566113|ref|XP_624821.1| PREDICTED: 60S ribosomal protein L3 [Apis mellifera]
          Length = 415

 Score =  422 bits (1086), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 201/321 (62%), Positives = 250/321 (77%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP  LTAF+GYKAGMTH+VR+ 
Sbjct: 1   MSHRKFSAPRHGSMGFYPKKRSQRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREA 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP++VVGVVGY++TP GLR+L TVWA+HL+E+ RRRFYK
Sbjct: 61  DRPGSKVNKKEIVEAVTILETPPMIVVGVVGYIETPHGLRALTTVWAEHLSEDCRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTK +KK++ D G+K I+   +K+ KYC V+R              KKAH+
Sbjct: 121 NWYKSKKKAFTKASKKWQDDLGRKSIENDFKKIIKYCKVVRIIAHTQMKLLRQRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG++ QKV +A    EK +P+  VF  DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQLNGGTIEQKVQWAREHLEKPVPVSNVFAPDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G+           
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGKIVK 300

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           ++A TE+D +   ++  MG F
Sbjct: 301 NNASTEYDLTEKTITP-MGGF 320


>gi|380012028|ref|XP_003690092.1| PREDICTED: 60S ribosomal protein L3-like [Apis florea]
          Length = 415

 Score =  422 bits (1085), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 201/321 (62%), Positives = 250/321 (77%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP  LTAF+GYKAGMTH+VR+ 
Sbjct: 1   MSHRKFSAPRHGSMGFYPKKRSQRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREA 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP++VVGVVGY++TP GLR+L TVWA+HL+E+ RRRFYK
Sbjct: 61  DRPGSKVNKKEIVEAVTILETPPMIVVGVVGYIETPHGLRALTTVWAEHLSEDCRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTK +KK++ D G+K I+   +K+ KYC V+R              KKAH+
Sbjct: 121 NWYKSKKKAFTKASKKWQDDLGRKSIENDFKKIVKYCKVVRIIAHTQMKLLRQRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG++ QKV +A    EK +P+  VF  DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQLNGGTIEQKVQWAREHLEKPVPVSNVFAPDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G+           
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGKIVK 300

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           ++A TE+D +   ++  MG F
Sbjct: 301 NNASTEYDLTEKTITP-MGGF 320


>gi|402076640|gb|EJT72063.1| 60S ribosomal protein L3 [Gaeumannomyces graminis var. tritici
           R3-111a-1]
          Length = 392

 Score =  422 bits (1085), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 200/315 (63%), Positives = 249/315 (79%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSL FLPRKRA+RHRGKVK+FPKDDP KP  LTA +GYKAGMT IVRD+
Sbjct: 1   MSHRKYEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+K HKKE  EAV+II+TPP++VVG+VGY++TPRGLRSL TVWA+HL++E++RRFYK
Sbjct: 61  DRPGAKSHKKEVVEAVSIIDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDELKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK+    G   I  ++E++KKYCTV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKKHSESKG-ASITREIERIKKYCTVVRVLAHTQIRKTPLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGGSVA KV+F +G FEK + ID +F+++E+ID+I VTKG G+ GV +RWG  +L
Sbjct: 180 MEIQINGGSVADKVEFGHGLFEKPVSIDTIFEQNEVIDVIAVTKGHGFNGVTSRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++GKA  E  SA TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKVYRIGKADAED-SAATE 298

Query: 287 FDRSVYLLSSLMGSF 301
            D +   ++  MG F
Sbjct: 299 LDVTKKKITP-MGGF 312


>gi|146417684|ref|XP_001484810.1| 60S ribosomal protein L3 [Meyerozyma guilliermondii ATCC 6260]
 gi|146390283|gb|EDK38441.1| 60S ribosomal protein L3 [Meyerozyma guilliermondii ATCC 6260]
          Length = 389

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 201/315 (63%), Positives = 250/315 (79%), Gaps = 18/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSLGFLPRKRA++ RG+VK+FPKD  SKP  LTAFLGYKAGMT IVRD+
Sbjct: 1   MSHRKFEAPRHGSLGFLPRKRAAKQRGRVKSFPKDVKSKPVALTAFLGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  EA T+++TPPLV+VGVVGYV+TPRGLRSL TVWA+HL+EE++RRFYK
Sbjct: 61  DRPGSKMHKREIVEAATVVDTPPLVIVGVVGYVETPRGLRSLTTVWAEHLSEEIKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY+ KY  D  +  I+ +L ++ KY +V+R              KKAHL
Sbjct: 121 NWFKSKKKAFTKYSAKYAQDGAQ--IEKELARITKYASVVRVLAHTQVKKTPLSQKKAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQVNGGS+A KV +A   FEK + +D+VF+++EMID+I VT+G G+EGV  RWG  +L
Sbjct: 179 AEIQVNGGSIADKVQWAKEHFEKTVTVDSVFEQNEMIDVIAVTRGHGFEGVTHRWGTKKL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPA V++TVARAGQNGYHHRT +N K+Y++G  + ES+ A TE
Sbjct: 239 PRKTHRGLRKVACIGAWHPANVNWTVARAGQNGYHHRTSINHKVYRVGSGADESNGA-TE 297

Query: 287 FDRSVYLLSSLMGSF 301
           FDR+   ++  MG F
Sbjct: 298 FDRTKKSINP-MGGF 311


>gi|389638328|ref|XP_003716797.1| 60S ribosomal protein L3 [Magnaporthe oryzae 70-15]
 gi|351642616|gb|EHA50478.1| 60S ribosomal protein L3 [Magnaporthe oryzae 70-15]
 gi|440474629|gb|ELQ43359.1| 60S ribosomal protein L3 [Magnaporthe oryzae Y34]
 gi|440480504|gb|ELQ61164.1| 60S ribosomal protein L3 [Magnaporthe oryzae P131]
          Length = 392

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 200/315 (63%), Positives = 250/315 (79%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSL +LPRKRA+RHRGKVK+FPKDDP KP  LTA +GYKAGMT IVRD+
Sbjct: 1   MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+K HKKE  EAV+II+TPP++VVG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGAKAHKKEVVEAVSIIDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK+ ++     +  +LE++KKYCTV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKKH-SESKASSVTRELERIKKYCTVVRVLAHTQIRKTPLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGSVA KV+F +G FEK + ID +F+++EMIDII VTKG G+ GV +RWG  +L
Sbjct: 180 MEIQVNGGSVADKVEFGHGLFEKPVSIDTIFEQNEMIDIIAVTKGHGFNGVTSRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++GK   E ++A TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKVYRIGKGDAEDNAA-TE 298

Query: 287 FDRSVYLLSSLMGSF 301
            D +   ++  MG F
Sbjct: 299 IDVTKKKITP-MGGF 312


>gi|61654614|gb|AAX48833.1| L3 [Suberites domuncula]
          Length = 399

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 200/314 (63%), Positives = 248/314 (78%), Gaps = 16/314 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSL FLPRKR  RHRGKVK FPKDD +KPC LTAF+GYKAGMTHI+R++
Sbjct: 1   MSHRKFSAPRHGSLAFLPRKRCKRHRGKVKTFPKDDAAKPCHLTAFMGYKAGMTHILREM 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
            +PGSK HK E  EAVTIIETPP+++VGVVGY++TPRGLR + T++AQHLN+E RRRFYK
Sbjct: 61  NRPGSKSHKHEVVEAVTIIETPPIMIVGVVGYIETPRGLRPIKTIFAQHLNDECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NW  SKKKAF+K + +++ + G+K IQA  +K+KKYC VIR               KKAH
Sbjct: 121 NWSNSKKKAFSKASGRWKDEAGQKSIQADFDKLKKYCKVIRVICHTQVQLLNGVRQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           +MEIQVNGGS++ KVD+A    EK IPI  +F KDEMID+IGVTKGKG++GV +RW   +
Sbjct: 181 IMEIQVNGGSISDKVDWAKEHMEKAIPIKDIFNKDEMIDVIGVTKGKGFKGVTSRWHCKK 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTH+GLRKVACIGAWHP+RVSF+VARAGQ GYHHRTE+NKKIY++G   +++ +A T
Sbjct: 241 LPRKTHKGLRKVACIGAWHPSRVSFSVARAGQKGYHHRTEINKKIYRIGD-KEDNANAAT 299

Query: 286 EFDRSVYLLSSLMG 299
           EFD +   ++ + G
Sbjct: 300 EFDPTEKRITPVGG 313


>gi|260946767|ref|XP_002617681.1| 60S ribosomal protein L3 [Clavispora lusitaniae ATCC 42720]
 gi|238849535|gb|EEQ38999.1| 60S ribosomal protein L3 [Clavispora lusitaniae ATCC 42720]
          Length = 388

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 198/313 (63%), Positives = 249/313 (79%), Gaps = 17/313 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSLGFLPRKR++ HRG+VK+FPKD  SKP  LTAFLGYKAGMT IVRD+
Sbjct: 1   MSHRKYEQPRHGSLGFLPRKRSASHRGQVKSFPKDVKSKPVALTAFLGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  EA T+++TPP+V+VGVVGYV+TPRGLRSL TVWA+HL+EEVRRRFYK
Sbjct: 61  DRPGSKMHKREVVEAATVVDTPPMVIVGVVGYVETPRGLRSLTTVWAEHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY+ KY  +   ++I  +L ++ KY +V+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYSAKYAQNG--EEINRELARITKYASVVRVLVHTQVKKTPLSQKKAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQ+NGGS+  KV++A   FEK + +D+VF+KDEMID++ VTKG G+EGV  RWG  +L
Sbjct: 179 AEIQINGGSIEDKVNWAKEHFEKTVSVDSVFEKDEMIDVVAVTKGHGFEGVTHRWGTKKL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPA V++TVARAGQNGYHHRT +N K+Y++G  + E++ A TE
Sbjct: 239 PRKTHRGLRKVACIGAWHPANVNWTVARAGQNGYHHRTSINHKVYRVGSGADEANGA-TE 297

Query: 287 FDRSVYLLSSLMG 299
           FDR+   ++ L G
Sbjct: 298 FDRTKKTINPLGG 310


>gi|327304004|ref|XP_003236694.1| 60S ribosomal protein L3 [Trichophyton rubrum CBS 118892]
 gi|326462036|gb|EGD87489.1| 60S ribosomal protein L3 [Trichophyton rubrum CBS 118892]
          Length = 459

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 201/315 (63%), Positives = 247/315 (78%), Gaps = 19/315 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSL +LPRKRA+RHRGKVK+FPKDDP KP  LTA +GYKAGMT IVRD+
Sbjct: 70  MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTATMGYKAGMTTIVRDL 129

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           E+PG+K+H+KE  EAVTI+ETPP++ VG+VGY++TPRGLRSL TVWA HL++EV+RRFYK
Sbjct: 130 ERPGAKMHRKEIVEAVTIVETPPMIAVGIVGYIETPRGLRSLTTVWADHLSDEVKRRFYK 189

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFT+Y K   T         +LE++K YCTV+R              KKAHL
Sbjct: 190 NWYKSKKKAFTRYAK---THADASTTTRELERIKNYCTVVRLLAHTQIRKTPLKQKKAHL 246

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGS+A KV+FA+G FEK I +D+VF+KDE++D+I VTKG G+ GV +RWG  +L
Sbjct: 247 MEIQVNGGSIADKVEFAHGLFEKPIDVDSVFEKDEVVDVIAVTKGHGFSGVTSRWGTKKL 306

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP+ V +TVARAGQ+GYHHRT  N KIY++GKA  E  +A T+
Sbjct: 307 PRKTHKGLRKVACIGAWHPSHVQWTVARAGQDGYHHRTSANHKIYRIGKADDEG-NASTD 365

Query: 287 FDRSVYLLSSLMGSF 301
           FD S   ++  MG F
Sbjct: 366 FDVSKKRITP-MGGF 379


>gi|171689180|ref|XP_001909530.1| hypothetical protein [Podospora anserina S mat+]
 gi|170944552|emb|CAP70663.1| unnamed protein product [Podospora anserina S mat+]
          Length = 392

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 200/315 (63%), Positives = 248/315 (78%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSL +LPRKRA+RHRGKVK+FPKDD  KP  LTA +GYKAGMT IVRD+
Sbjct: 1   MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDAKKPVHLTAAMGYKAGMTTIVRDM 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+K +KKE  EAVTII+TPP++VVG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGAKANKKEVVEAVTIIDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK+  + G   I  +LE++KKYCTV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKKHSENSG-ASITRELERIKKYCTVVRVLAHTQIRKTPLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGGSVA KV+F +G FEK + ID +F+KDEMID+I VTKG G+ GV  RWG  +L
Sbjct: 180 MEIQINGGSVADKVEFGHGLFEKPVSIDTIFEKDEMIDVIAVTKGHGFSGVTARWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++GK   + ++A TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKVYRIGKGDADDNAA-TE 298

Query: 287 FDRSVYLLSSLMGSF 301
            D +   ++  MG F
Sbjct: 299 IDVTKKTITP-MGGF 312


>gi|47217938|emb|CAG02221.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 402

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 200/318 (62%), Positives = 249/318 (78%), Gaps = 20/318 (6%)

Query: 2   SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
           SHRKF  PRHGSLGFLPRKR+ RHRGK K+FPKDDPSKP  +TAFLGYKAGMTHIVR+V+
Sbjct: 1   SHRKFSAPRHGSLGFLPRKRSRRHRGKAKSFPKDDPSKPVHMTAFLGYKAGMTHIVREVD 60

Query: 62  KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
           +PGSK++KKE  EAVTI+ETPP++V+GVVGYV TP GLRS  T++A+H+++E +RRFYKN
Sbjct: 61  RPGSKVNKKEVVEAVTIVETPPMIVIGVVGYVNTPSGLRSFKTIFAEHISDECKRRFYKN 120

Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLM 167
           W KSKKKAFTKY KK++ D+GKK ++     MKKYC VIR              KK+HLM
Sbjct: 121 WYKSKKKAFTKYCKKWQDDEGKKQLEKDFALMKKYCQVIRVITHTQMRLLPIRQKKSHLM 180

Query: 168 EIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 227
           E+Q+NGG++A KVD+A    E+ IP++ VF +DEMID+IGVTKG GY+GV +RW   +LP
Sbjct: 181 EVQLNGGTIADKVDWAREKLEQSIPVNTVFAQDEMIDVIGVTKGHGYKGVTSRWHTKKLP 240

Query: 228 RKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------SH 281
           RKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           +
Sbjct: 241 RKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYHTKDGKVVKN 300

Query: 282 SAMTEFDRSVYLLSSLMG 299
           +A T++D S   ++ L G
Sbjct: 301 NASTDYDLSNKSINPLGG 318


>gi|383848395|ref|XP_003699836.1| PREDICTED: 60S ribosomal protein L3-like [Megachile rotundata]
          Length = 432

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 201/321 (62%), Positives = 251/321 (78%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           +SHRKF  PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP  LTAF+GYKAGMTH+VR+ 
Sbjct: 18  ISHRKFSAPRHGSMGFYPKKRSQRHRGKVKAFPKDDPSKPVHLTAFVGYKAGMTHVVREA 77

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP++VVGVVGY++TP GLR+L TVWA+HL+E+ RRRFYK
Sbjct: 78  DRPGSKVNKKEIVEAVTILETPPMIVVGVVGYIETPHGLRALTTVWAEHLSEDCRRRFYK 137

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTK +KK++ D G+K I++  +K+ KYC V+R              KKAH+
Sbjct: 138 NWYKSKKKAFTKASKKWQDDLGRKSIESDFKKIIKYCKVVRIIAHTQMKLLRQRQKKAHI 197

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG++ QKV +A    EK +PI  VF  DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 198 MEIQLNGGTIEQKVQWAREHLEKPVPISNVFAPDEMIDVIGVTKGKGYKGVTSRWHTKKL 257

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G+           
Sbjct: 258 PRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGKIVK 317

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           ++A TE+D +   ++  MG F
Sbjct: 318 NNASTEYDLTEKTITP-MGGF 337


>gi|322705242|gb|EFY96829.1| 60S ribosomal protein L3 [Metarhizium anisopliae ARSEF 23]
          Length = 391

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 200/313 (63%), Positives = 243/313 (77%), Gaps = 16/313 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSL FLPRKRA+RHRGKVK+FPKDDP KP  LTA +GYKAGMT IVRD+
Sbjct: 1   MSHRKFEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+K +KKE  EAVT+++TPP++VVG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGAKANKKEVVEAVTVVDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK+    G   I  +LE++KKYCTV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKKHSESSG-ASITRELERIKKYCTVVRVLAHTQIRKTPLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGGSVA KV F    FEK + ID +F++DEMID+I VTKG G+ GV  RWG  +L
Sbjct: 180 MEIQINGGSVADKVSFGQDLFEKPVSIDTIFEQDEMIDVIAVTKGHGFNGVTARWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++GK   E  SA TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKVYRIGKGDAED-SASTE 298

Query: 287 FDRSVYLLSSLMG 299
            D +   ++ L G
Sbjct: 299 IDVTKKKITPLGG 311


>gi|322695627|gb|EFY87432.1| 60S ribosomal protein L3 [Metarhizium acridum CQMa 102]
          Length = 391

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 200/313 (63%), Positives = 243/313 (77%), Gaps = 16/313 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSL FLPRKRA+RHRGKVK+FPKDDP KP  LTA +GYKAGMT IVRD+
Sbjct: 1   MSHRKFEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+K +KKE  EAVT+++TPP++VVG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGAKANKKEVVEAVTVVDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK+    G   I  +LE++KKYCTV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKKHSESSG-ASITRELERIKKYCTVVRVLAHTQIRKTPLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGGSVA KV F    FEK + ID +F++DEMID+I VTKG G+ GV  RWG  +L
Sbjct: 180 MEIQINGGSVADKVSFGQDLFEKPVSIDTIFEQDEMIDVIAVTKGHGFNGVTARWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++GK   E  SA TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKVYRIGKGDAED-SASTE 298

Query: 287 FDRSVYLLSSLMG 299
            D +   ++ L G
Sbjct: 299 VDVTKKKITPLGG 311


>gi|449549702|gb|EMD40667.1| hypothetical protein CERSUDRAFT_80320 [Ceriporiopsis subvermispora
           B]
          Length = 388

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 209/315 (66%), Positives = 258/315 (81%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSLGFLPRKRA+RHRGKVKAFPKDDP KP  LTA +GYKAGMTH+VRD+
Sbjct: 1   MSHRKYEAPRHGSLGFLPRKRAARHRGKVKAFPKDDPKKPVHLTAVMGYKAGMTHVVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  EAVT+IETPP+VVVGVVGYV+TPRGLR+L TVWA HL++E++RRFYK
Sbjct: 61  DRPGSKMHKREVVEAVTVIETPPMVVVGVVGYVETPRGLRTLTTVWASHLSDELKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW +SKKKAFT+Y KK+  +DG K I  +LE+++KYCTV+R              KKAHL
Sbjct: 121 NWYRSKKKAFTRYAKKH-AEDGGKSIARELERIRKYCTVVRVLAHTQIRKTGLSQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGS+A KV+FA+G FEK   + +VF++DE+ID+I VTKG G+EGV  RWG  +L
Sbjct: 180 MEIQVNGGSIADKVEFAHGLFEKPAEVGSVFEQDEVIDVIAVTKGHGFEGVTHRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE+NKKIY++G  S E+ +A TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTELNKKIYRVGSGSDEA-NASTE 298

Query: 287 FDRSVYLLSSLMGSF 301
            D +   ++  MG F
Sbjct: 299 HDITKKAITP-MGGF 312


>gi|357017575|gb|AET50816.1| hypothetical protein [Eimeria tenella]
          Length = 388

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 206/315 (65%), Positives = 249/315 (79%), Gaps = 19/315 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSLGF PRKR  RHRGKVKAFPKDDPSKP  LTAF+GYKAGMTHIVR+V
Sbjct: 1   MSHRKFERPRHGSLGFCPRKRCRRHRGKVKAFPKDDPSKPPHLTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           E+PGSKLHKKE  EAVTI+E+PP+V VG+VGY++TP+GLR+L TVWA HL+EE RRRFYK
Sbjct: 61  ERPGSKLHKKEVVEAVTIVESPPMVCVGLVGYIETPQGLRALSTVWAGHLSEECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFT+Y+KKY  ++    +QA+++ +K++C VIR              +KAH+
Sbjct: 121 NWYKSKKKAFTRYSKKYAENN---KMQAEIDSIKQHCAVIRAICHTQPSKTPTGLRKAHI 177

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+VA KVDF    FE  +PI AVF++DEM+D+IGVTKG G +GVV+R+GVTRL
Sbjct: 178 MEIQVNGGTVADKVDFVTKMFESPVPISAVFEQDEMLDVIGVTKGHGVKGVVSRFGVTRL 237

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPARV F V R GQ GY HRTEMNKK+Y++G  S +  +  T+
Sbjct: 238 PRKTHRGLRKVACIGAWHPARVQFQVPRHGQKGYFHRTEMNKKVYRIGSGS-DPRNGSTD 296

Query: 287 FDRSVYLLSSLMGSF 301
            D +   ++  MG F
Sbjct: 297 ADLTEKRITP-MGGF 310


>gi|324517742|gb|ADY46908.1| 60S ribosomal protein L3, partial [Ascaris suum]
          Length = 402

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 202/318 (63%), Positives = 251/318 (78%), Gaps = 18/318 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+GF P+KR+ RHRGKVKAFPKDDP+KP  LTAF+G+KAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSMGFTPKKRSRRHRGKVKAFPKDDPTKPIHLTAFIGFKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           +KPGSK++KKE  EAVTI+ETPP+V+VG+VGY+ TPRG R   TVWA+HL+E+ RRRFYK
Sbjct: 61  DKPGSKVNKKEVVEAVTILETPPMVIVGIVGYIDTPRGPRQFKTVWAEHLSEDCRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW  SKKKAF K+ KK++ +DG+K I++ L KMKKYC+ IR              KKAH+
Sbjct: 121 NWHTSKKKAFQKHAKKWQDEDGRKSIESDLNKMKKYCSKIRVIAHTQMKVMKHREKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+V +KVD+A    EKQ+ +D+VF +DEMID IGVTKGKG++GV +RW   +L
Sbjct: 181 MEIQVNGGTVPEKVDWAKEHLEKQVAVDSVFAQDEMIDCIGVTKGKGFKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA---SQESHSA 283
           PRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYHHRTE+NKKIY+LGK+    +   + 
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEVNKKIYRLGKSCLTEEGKRNG 300

Query: 284 MTEFDRSVYLLSSLMGSF 301
            TE+D +   ++  MG F
Sbjct: 301 GTEYDITEKSINP-MGGF 317


>gi|315115447|gb|ADT80696.1| ribosomal protein L3 [Euphydryas aurinia]
          Length = 412

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 207/321 (64%), Positives = 250/321 (77%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP  LTAF+GYKAGMTH+VR+ 
Sbjct: 1   MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTIIETPP+V VGVVGY++TP GLR+L TVWA+H++E+ RRRFYK
Sbjct: 61  DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPYGLRALLTVWAEHMSEDCRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW K KKKAFTK +KK++ + G+K I+   +KM +YC+VIR              KKAHL
Sbjct: 121 NWYKCKKKAFTKSSKKWQDELGRKSIEKDFKKMIRYCSVIRIIAHTQMKLLKQRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+V  KV +A    EK IPID+VF +DEMID IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQVNGGTVDDKVKWAREHLEKPIPIDSVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY+LG+           
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRLGQGIHTKDGKVIK 300

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           ++A TE+D S   ++  MG F
Sbjct: 301 NNASTEYDLSEKSITP-MGGF 320


>gi|431900074|gb|ELK08009.1| 60S ribosomal protein L3 [Pteropus alecto]
          Length = 533

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 202/310 (65%), Positives = 250/310 (80%), Gaps = 20/310 (6%)

Query: 10  RHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHK 69
           +HGSLGFLPRKR+SRHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V++PGSK++K
Sbjct: 28  KHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGSKVNK 87

Query: 70  KETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKA 129
           KE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  T++A+H+++E +RRFYKNW KSKKKA
Sbjct: 88  KEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYKNWHKSKKKA 147

Query: 130 FTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLMEIQVNGGS 175
           FTKY KK++ DDGKK ++     MKKYC VIR              KKAHLMEIQVNGG+
Sbjct: 148 FTKYCKKWQDDDGKKQLEKDFNSMKKYCQVIRVIAHTQMRLLPLRQKKAHLMEIQVNGGT 207

Query: 176 VAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLR 235
           VA+K+D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW   +LPRKTHRGLR
Sbjct: 208 VAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLR 267

Query: 236 KVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQESHSAMTEFDR 289
           KVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           ++A T++D 
Sbjct: 268 KVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDL 327

Query: 290 SVYLLSSLMG 299
           S   ++ L G
Sbjct: 328 SDKSINPLGG 337


>gi|325184995|emb|CCA19486.1| 60S ribosomal protein L3 putative [Albugo laibachii Nc14]
          Length = 388

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 204/315 (64%), Positives = 248/315 (78%), Gaps = 19/315 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           M HRKFE PRHG LGFLP+KR   H+G+++ FP+DD +K   LTAFL +KAGMTHI+R+V
Sbjct: 1   MGHRKFEAPRHGHLGFLPKKRTKHHQGRIRKFPRDDCNKAPHLTAFLAHKAGMTHIMREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
            +PGSKLHKKE  EAV+I+ETPP+V+VGVVGY++TPRGLRSL TVWA+HL+EEV+RRFYK
Sbjct: 61  NQPGSKLHKKEIVEAVSILETPPMVIVGVVGYLETPRGLRSLTTVWAEHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSK+KAFTKY KKY       DI+ +L ++KKYC V+R              KKAH+
Sbjct: 121 NWYKSKRKAFTKYAKKYANSS---DIERELNRIKKYCQVVRVLAHDQPKKLHLRIKKAHI 177

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGGSV  KVDFA   FEKQ+P+ AVF +DE+IDI G TKG G EGVVTRWGVTRL
Sbjct: 178 MEIQINGGSVPDKVDFAKSLFEKQVPVSAVFTQDELIDICGATKGHGIEGVVTRWGVTRL 237

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHP+RVS+TV RAGQ+GYHHRTE+NKKIY++G A+ ++ S  TE
Sbjct: 238 PRKTHRGLRKVACIGAWHPSRVSYTVPRAGQHGYHHRTEINKKIYRIG-AAGDAKSCQTE 296

Query: 287 FDRSVYLLSSLMGSF 301
            D +   ++  MG F
Sbjct: 297 QDLTEKSITP-MGGF 310


>gi|62083393|gb|AAX62421.1| ribosomal protein L3 [Lysiphlebus testaceipes]
 gi|62083395|gb|AAX62422.1| ribosomal protein L3 variant 1 [Lysiphlebus testaceipes]
          Length = 412

 Score =  420 bits (1080), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 201/321 (62%), Positives = 252/321 (78%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP  LTAF+GYKAGMTH+VR+ 
Sbjct: 1   MSHRKFSAPRHGSMGFYPKKRSQRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREA 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+++VG VGY++TP GLR+L TVWA+HL+E+ RRRFYK
Sbjct: 61  DRPGSKVNKKEIVEAVTILETPPMMIVGCVGYIETPHGLRALTTVWAEHLSEDCRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTK +KK++ D G+K I+  L+K+KKYC V+R              KKA++
Sbjct: 121 NWYKSKKKAFTKASKKWQDDLGRKSIEKDLKKIKKYCKVVRVIAHTQMKLLRQRQKKANI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGGS+A KV++A    EK IP+  VF +DEMID+IGVTKGKG +GV +RW   +L
Sbjct: 181 MEIQLNGGSIADKVEWAREHLEKPIPVSNVFAQDEMIDVIGVTKGKGTKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G+           
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGRVVK 300

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           ++A TE+D +   ++  MG F
Sbjct: 301 NNASTEYDLTEKSITP-MGGF 320


>gi|71019525|ref|XP_759993.1| hypothetical protein UM03846.1 [Ustilago maydis 521]
 gi|46099519|gb|EAK84752.1| hypothetical protein UM03846.1 [Ustilago maydis 521]
          Length = 474

 Score =  420 bits (1080), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 202/325 (62%), Positives = 247/325 (76%), Gaps = 33/325 (10%)

Query: 6   FEHPRHGSLGFLPRKRASRHRGKVKA-----------------FPKDDPSKPCRLTAFLG 48
           FEHPRHGSLGFLPRKRA+RHRGKVKA                 FPKDDP KP  LTA +G
Sbjct: 72  FEHPRHGSLGFLPRKRAARHRGKVKASLTLSSIYRASMYQSHSFPKDDPKKPVHLTAMIG 131

Query: 49  YKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQ 108
           YKAGMTHIVRD+++PGSK+HKKE  EAVT+IETPP+V VGVVGYV+TPRGLRSL TVWA+
Sbjct: 132 YKAGMTHIVRDLDRPGSKMHKKEIVEAVTVIETPPMVAVGVVGYVETPRGLRSLTTVWAE 191

Query: 109 HLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR------- 161
           HL++EV+RRFYKNW +SKKKAFT+Y KK+  ++G   I  +LE++KKYCTV+R       
Sbjct: 192 HLSDEVKRRFYKNWYRSKKKAFTRYAKKHSENNG-ASISRELERIKKYCTVVRVLAHTQV 250

Query: 162 -------KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGY 214
                  KKAHLME+Q+NGGSVA+KVDFA   FEK   + +VF+++E+ID+I VTKG GY
Sbjct: 251 RKTGLKQKKAHLMEVQINGGSVAEKVDFAKEHFEKTFDVKSVFEQNEIIDVIAVTKGHGY 310

Query: 215 EGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLG 274
           EGV  RWG  +LPRKTHRGLRK+ACIGAWHPA V FTVAR+GQ+GYHHRTE+ KKIY++ 
Sbjct: 311 EGVTARWGTKKLPRKTHRGLRKIACIGAWHPANVMFTVARSGQDGYHHRTEIGKKIYRIS 370

Query: 275 KASQESHSAMTEFDRSVYLLSSLMG 299
               ++ S  T+FD +   ++ L G
Sbjct: 371 NGEDKT-SGSTDFDTTEKAITPLGG 394


>gi|302915465|ref|XP_003051543.1| 60S ribosomal protein L3 [Nectria haematococca mpVI 77-13-4]
 gi|256732482|gb|EEU45830.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 391

 Score =  420 bits (1079), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 199/313 (63%), Positives = 246/313 (78%), Gaps = 16/313 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSL +LPRKRA+RHRGKVK+FPKDDP KP  LTA +GYKAGMT IVRD+
Sbjct: 1   MSHRKFEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+K +KKE  EAVTI++TPP++VVG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGAKANKKEIVEAVTIVDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK+  ++G   I  +LE++KKYCT++R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKKHSENNG-ASITRELERIKKYCTIVRVLAHTQIRKTPLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGSVA KV F    FEK + I ++F++DEMID+I VTKG G+ GV  RWG  +L
Sbjct: 180 MEIQVNGGSVADKVAFGQELFEKPVDISSIFEQDEMIDVIAVTKGHGFNGVTARWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N KIY++GK   E ++A TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKIYRIGKGDAEDNAA-TE 298

Query: 287 FDRSVYLLSSLMG 299
            D +   ++ L G
Sbjct: 299 IDVTKKTITPLGG 311


>gi|346319212|gb|EGX88814.1| 60S ribosomal protein L3 [Cordyceps militaris CM01]
          Length = 475

 Score =  420 bits (1079), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 202/313 (64%), Positives = 244/313 (77%), Gaps = 16/313 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK E PRHGSL +LPRKRA+RHRGKVK+FPKDDP KP  LTA +GYKAGMT IVRD 
Sbjct: 84  MSHRKHEEPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDS 143

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+K +KKE  EAVTI++TPP++VVG+VGY++TPRGLRSL TVWA+HL++E++RRFYK
Sbjct: 144 DRPGAKSNKKEVVEAVTIVDTPPMIVVGLVGYIETPRGLRSLNTVWAEHLSDELKRRFYK 203

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK+    G   I  +LE+MKKYCTVIR              KKAHL
Sbjct: 204 NWYKSKKKAFTKYAKKHSEASG-ASIARELERMKKYCTVIRILAHTQIRKTPLKQKKAHL 262

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGS+A KVDF    FEK + ID++F++DEMID+I VTKG G+ GV  RWG  +L
Sbjct: 263 MEIQVNGGSIADKVDFGKNLFEKPVSIDSIFEQDEMIDVIAVTKGHGFTGVTKRWGTKKL 322

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP  V +TVARAGQ+GYHHRT +N K+Y++GKA  E  SA TE
Sbjct: 323 PRKTHKGLRKVACIGAWHPNHVQWTVARAGQDGYHHRTSVNHKVYRIGKAGAED-SASTE 381

Query: 287 FDRSVYLLSSLMG 299
            D +   ++ L G
Sbjct: 382 MDITKKSITPLGG 394


>gi|403418102|emb|CCM04802.1| predicted protein [Fibroporia radiculosa]
          Length = 939

 Score =  419 bits (1078), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 205/302 (67%), Positives = 250/302 (82%), Gaps = 16/302 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSLGFLPRKRA+RHRGKVKAFPKDD  KP  LTA +GYKAGMTH+VRD+
Sbjct: 1   MSHRKYEAPRHGSLGFLPRKRAARHRGKVKAFPKDDSKKPVHLTAIMGYKAGMTHVVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  EAVTIIETPPLVVVGVVGYV+TPRGLR+L TVWA HL++E++RRFYK
Sbjct: 61  DRPGSKMHKREVVEAVTIIETPPLVVVGVVGYVETPRGLRTLTTVWASHLSDELKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW +SKKKAFT+Y KK+  +DG K I  +LE+++KYCTV+R              KKAHL
Sbjct: 121 NWYRSKKKAFTRYAKKH-AEDGGKSIARELERIRKYCTVVRVLAHTQIRKTGLSQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGS+A KV+FA+G FEK + +  VF++DE++D+I VTKG G+EGV  RWG  +L
Sbjct: 180 MEIQVNGGSIADKVEFAHGLFEKPVEVGTVFEQDEVVDVIAVTKGHGFEGVTHRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE+NKKIY++G    E+ +A TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTELNKKIYRIGSGDDEA-NASTE 298

Query: 287 FD 288
            D
Sbjct: 299 HD 300


>gi|351699299|gb|EHB02218.1| 60S ribosomal protein L3 [Heterocephalus glaber]
          Length = 419

 Score =  419 bits (1078), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 205/310 (66%), Positives = 247/310 (79%), Gaps = 20/310 (6%)

Query: 10  RHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHK 69
           RHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V++PGSK++K
Sbjct: 26  RHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPIHLTAFLGYKAGMTHIVREVDRPGSKVNK 85

Query: 70  KETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKA 129
           KE  EAVTI+ETPP+VVVG+VGYV+TPRGLRS  TV+A+H+++E +RRFYKNW KSKKKA
Sbjct: 86  KEVVEAVTIVETPPMVVVGIVGYVETPRGLRSFKTVFAEHISDECKRRFYKNWHKSKKKA 145

Query: 130 FTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLMEIQVNGGS 175
           FTKY KK++ D GKK +      MKKYC VIR              KKAHLMEIQVNGG+
Sbjct: 146 FTKYCKKWQDDMGKKQLDKDFSSMKKYCQVIRIIAHTQMRLLPLRQKKAHLMEIQVNGGT 205

Query: 176 VAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLR 235
           VA+K+D+A    E+QIP+  VF +DEMID+IGVTKGKGY+GV +RW   +LPRKTHRGLR
Sbjct: 206 VAEKLDWARERLEQQIPVSQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLR 265

Query: 236 KVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQESHSAMTEFDR 289
           KVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           ++A T++D 
Sbjct: 266 KVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDL 325

Query: 290 SVYLLSSLMG 299
           S   ++ L G
Sbjct: 326 SDKSINPLGG 335


>gi|392568120|gb|EIW61294.1| 60S ribosomal protein L3 [Trametes versicolor FP-101664 SS1]
          Length = 388

 Score =  419 bits (1078), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 204/315 (64%), Positives = 258/315 (81%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSLGFLPRKRA+RHRGKVKAFPKDDP KP  LTA +GYKAGMTH+VRD+
Sbjct: 1   MSHRKYEAPRHGSLGFLPRKRAARHRGKVKAFPKDDPKKPVHLTAIMGYKAGMTHVVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  EAVT++ETPP++VVGVVGYV+TPRGLR+L TVWA HL++E++RRFYK
Sbjct: 61  DRPGSKMHKREVVEAVTVVETPPMIVVGVVGYVETPRGLRTLTTVWASHLSDELKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW +SKKKAFT+Y KK+  +DG K I  +LE+++KYCTV+R              K+AHL
Sbjct: 121 NWYRSKKKAFTRYAKKH-AEDGGKSIARELERIRKYCTVVRVLAHTQIRKTGLTQKRAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGS+A KV+FA G FEK + + +VF++DE+ID+I VTKG G+EGV  RWG  +L
Sbjct: 180 MEIQVNGGSIADKVEFANGLFEKPVEVSSVFEQDEVIDVIAVTKGHGFEGVTHRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE+NKKIY++G + ++  +A TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTELNKKIYRIG-SGEDDANASTE 298

Query: 287 FDRSVYLLSSLMGSF 301
            D +   ++  MG F
Sbjct: 299 HDVTKKAITP-MGGF 312


>gi|358386834|gb|EHK24429.1| hypothetical protein TRIVIDRAFT_79029 [Trichoderma virens Gv29-8]
          Length = 391

 Score =  419 bits (1077), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 197/313 (62%), Positives = 248/313 (79%), Gaps = 16/313 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSL +LPRKRA+RHRGKVK+FPKDDP KP  LTA +GYKAGMT IVRD+
Sbjct: 1   MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+K +KKE  EAV+II+TPP++VVG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGAKANKKEVVEAVSIIDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK+ +D+    I  +LE++KKYCTV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKKH-SDNSGASINRELERIKKYCTVVRILAHTQIRKTPLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGSVA+KVDF    FEK + ID++F++DE+ID+I VTKG G+ GV  RWG  +L
Sbjct: 180 MEIQVNGGSVAEKVDFGKDLFEKPVSIDSIFEQDEVIDVIAVTKGHGFSGVTARWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++GK   +  +A T+
Sbjct: 240 PRKTHKGLRKVACIGAWHPSHVQWTVARAGQEGYHHRTSVNHKVYRIGKGDADD-NASTD 298

Query: 287 FDRSVYLLSSLMG 299
            D +   ++ L G
Sbjct: 299 IDVTKKKITPLGG 311


>gi|392875086|gb|AFM86375.1| 60S ribosomal protein L3 [Callorhinchus milii]
 gi|392876078|gb|AFM86871.1| 60S ribosomal protein L3 [Callorhinchus milii]
 gi|392881180|gb|AFM89422.1| 60S ribosomal protein L3 [Callorhinchus milii]
          Length = 403

 Score =  419 bits (1077), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 198/319 (62%), Positives = 252/319 (78%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR  RHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRCRRHRGKVKSFPKDDPSKPIHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVT+IETPP+V+VG+VGYV+TPRGLR+  TV+A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTVIETPPMVIVGLVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ ++GKK ++     MKKYC VIR              KK+H+
Sbjct: 121 NWYKSKKKAFTKYCKKWQDEEGKKQLEKDFASMKKYCQVIRVLAHTQMRLLPLRQKKSHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG++A+K+D+A    E+Q+ ++ VF +DEMID+IGVTKG G++GV +RW   +L
Sbjct: 181 MEIQVNGGTIAEKIDWAREKLEQQVAVNTVFGQDEMIDVIGVTKGHGFKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+Y++G            
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKVYRVGMGYHNKEGKVVK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A TE+D +   ++ L G
Sbjct: 301 NNASTEYDLTDKSINPLGG 319


>gi|392878726|gb|AFM88195.1| 60S ribosomal protein L3 [Callorhinchus milii]
          Length = 403

 Score =  419 bits (1077), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 198/319 (62%), Positives = 252/319 (78%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR  RHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRCRRHRGKVKSFPKDDPSKPIHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVT+IETPP+V+VG+VGYV+TPRGLR+  TV+A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTVIETPPMVIVGLVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ ++GKK ++     MKKYC VIR              KK+H+
Sbjct: 121 NWYKSKKKAFTKYCKKWQDEEGKKQLEKDFASMKKYCQVIRVLAHTQMRLLPLRQKKSHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG++A+K+D+A    E+Q+ ++ VF +DEMID+IGVTKG G++GV +RW   +L
Sbjct: 181 MEIQVNGGTIAEKIDWAREKLEQQVAVNTVFGQDEMIDVIGVTKGHGFKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+Y++G            
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKVYRVGMGYHNKEGKVVK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A TE+D +   ++ L G
Sbjct: 301 NNASTEYDLTDKSINPLGG 319


>gi|340724650|ref|XP_003400694.1| PREDICTED: 60S ribosomal protein L3-like [Bombus terrestris]
          Length = 414

 Score =  419 bits (1077), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 199/321 (61%), Positives = 249/321 (77%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP  LTAF+GYKAGMTH+VR+ 
Sbjct: 1   MSHRKFSAPRHGSMGFYPKKRSQRHRGKVKAFPKDDPSKPVHLTAFVGYKAGMTHVVREA 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+E PP++VVGVVGY++TP GLR+L TVWA+HL+E+ RRRFYK
Sbjct: 61  DRPGSKVNKKEIVEAVTILEAPPMIVVGVVGYIETPHGLRALTTVWAEHLSEDCRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTK +KK++ D G+K I++   K+ KYC V+R              KKAH+
Sbjct: 121 NWYKSKKKAFTKASKKWQDDLGRKSIESDFAKIIKYCKVVRIVAHTQMKLLRQRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG++  KV +A    EK +P++ VF  DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQLNGGTIEDKVQWAREHLEKPVPVNNVFAPDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G+           
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGKIVK 300

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           ++A TE+D +   ++  MG F
Sbjct: 301 NNASTEYDLTEKTITP-MGGF 320


>gi|310794485|gb|EFQ29946.1| ribosomal protein L3 [Glomerella graminicola M1.001]
          Length = 391

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 197/313 (62%), Positives = 246/313 (78%), Gaps = 16/313 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSL +LPRKRA+RHRGKVK+FPKDD  KP  LTA +GYKAGMT IVRD+
Sbjct: 1   MSHRKFEAPRHGSLAYLPRKRAARHRGKVKSFPKDDAKKPVHLTAAMGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+K +KKE  EAV+II+TPP++VVG+VGY++TPRGLRSL TVWA+HL++E+RRRFYK
Sbjct: 61  DRPGAKANKKEVVEAVSIIDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEIRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY K++    G   I  +LE++KKYCTV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKQHSEASG-ASITRELERIKKYCTVVRVLAHTQIRKTPLTQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGSV +KVDF YG FEK + ID++F+++EMID+I VT G GY GV +RWG  +L
Sbjct: 180 MEIQVNGGSVPEKVDFGYGLFEKPVTIDSIFEQNEMIDVIAVTTGHGYNGVTSRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++GK   +  +A T+
Sbjct: 240 PRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKVYRIGKGDADD-NASTD 298

Query: 287 FDRSVYLLSSLMG 299
            D +   ++ L G
Sbjct: 299 VDVTKKTITPLGG 311


>gi|327272509|ref|XP_003221027.1| PREDICTED: 60S ribosomal protein L3-like [Anolis carolinensis]
          Length = 403

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 209/319 (65%), Positives = 257/319 (80%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+ RHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSRRHRGKVKSFPKDDPSKPIHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVT++ETPP+V+VG+VGYV+TPRGLR+  TV+A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTVVETPPMVIVGIVGYVETPRGLRTFRTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ +DGKK ++     MKKYC VIR              KK+HL
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFNSMKKYCQVIRVIAHTQMRMLPLRQKKSHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+VA+KVD+A    E+Q+P+  VF +DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQVNGGTVAEKVDWARAKLEQQVPVSTVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ------ES 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+  Q        
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYQIKDGKLIK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A TE+D+S   ++ L G
Sbjct: 301 NNASTEYDQSDKSINPLGG 319


>gi|308490853|ref|XP_003107618.1| CRE-RPL-3 protein [Caenorhabditis remanei]
 gi|308250487|gb|EFO94439.1| CRE-RPL-3 protein [Caenorhabditis remanei]
          Length = 401

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 199/318 (62%), Positives = 247/318 (77%), Gaps = 18/318 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHG +GF P+KR+  +RG++KAFPKDD SKP  LTAFLGYKAGMTHIVRDV
Sbjct: 1   MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           +KPGSK++KKE  EAV+IIETPP+V+ GV GY+ TP+G R+L T+WA+HL+EE RRRFY 
Sbjct: 61  DKPGSKVNKKEVVEAVSIIETPPMVIAGVTGYIDTPQGPRALTTIWAEHLSEEARRRFYS 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ +DGKK I+A   K+KKYC+ IR              KKAHL
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           +EIQVNGG++ QKVD+A    EKQI +D VF +DEMID IGVTKG G++GV +RW   +L
Sbjct: 181 VEIQVNGGTIEQKVDWAREHLEKQIQVDTVFSQDEMIDTIGVTKGHGFKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAS---QESHSA 283
           PRKTH+GLRKVACIGAWHP+RV+FTVARAGQ G+HHRT +N KIYK+GK++   +  ++ 
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYKIGKSALTEEGKNNG 300

Query: 284 MTEFDRSVYLLSSLMGSF 301
            TEFD +   ++  MG F
Sbjct: 301 STEFDLTQKTINP-MGGF 317


>gi|328773128|gb|EGF83165.1| hypothetical protein BATDEDRAFT_29178 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 390

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 212/315 (67%), Positives = 256/315 (81%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSH KFEHPRHGSLGFLPRKRA RHRGK K+FP+DD  KP  LTAFLGYKAGMTHIVRD+
Sbjct: 1   MSHCKFEHPRHGSLGFLPRKRARRHRGKCKSFPRDDAKKPVHLTAFLGYKAGMTHIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+K+HKKE  EAV++IE PP+VVVGVVGYV+TPRGLRSL TVWA+HL+EEVRRRFYK
Sbjct: 61  DRPGAKMHKKEIVEAVSVIEAPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSK+KAFTKY KKY   D  K I++QL++++KYC V+R              KKAH+
Sbjct: 121 NWYKSKRKAFTKYAKKYTEADA-KPIESQLQRIQKYCQVVRVICHTQIQKVRLGTKKAHV 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGGSVA KV +A   FEK + + ++F++DEMIDIIG+TKG G+EGVV RWGV +L
Sbjct: 180 MEIQLNGGSVADKVAWAKDHFEKTVELSSIFEQDEMIDIIGITKGHGFEGVVARWGVKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP+RV F V RAGQ+GYHHRTEMNKK+Y++GKA  + +SA TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPSRVQFAVPRAGQDGYHHRTEMNKKVYRVGKAG-DKNSASTE 298

Query: 287 FDRSVYLLSSLMGSF 301
           FD +   ++  MG F
Sbjct: 299 FDLTTKDITP-MGGF 312


>gi|392879502|gb|AFM88583.1| 60S ribosomal protein L3 [Callorhinchus milii]
          Length = 403

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 198/319 (62%), Positives = 252/319 (78%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR  RHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRCRRHRGKVKSFPKDDPSKPIHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVT+IETPP+V+VG+VGYV+TPRGLR+  TV+A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTVIETPPMVIVGLVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ ++GKK ++     MKKYC VIR              KK+H+
Sbjct: 121 NWYKSKKKAFTKYCKKWQDEEGKKQLEKDFASMKKYCLVIRVLAHTQMRLLPLRQKKSHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG++A+K+D+A    E+Q+ ++ VF +DEMID+IGVTKG G++GV +RW   +L
Sbjct: 181 MEIQVNGGTIAEKIDWAREKLEQQVAVNTVFGQDEMIDVIGVTKGHGFKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+Y++G            
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKVYRVGMGYHNKEGKVVK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A TE+D +   ++ L G
Sbjct: 301 NNASTEYDLTDKSINPLGG 319


>gi|358399714|gb|EHK49051.1| hypothetical protein TRIATDRAFT_297774 [Trichoderma atroviride IMI
           206040]
          Length = 391

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 198/313 (63%), Positives = 248/313 (79%), Gaps = 16/313 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSL +LPRKRA+RHRGKVK+FPKDD  KP  LTA +GYKAGMT IVRD+
Sbjct: 1   MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDAKKPVHLTATMGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+K +KKE  EAV+II+TPP++VVG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGAKANKKEVVEAVSIIDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK+ +D+    I  +LE++KKYCTV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKKH-SDNSGSTITRELERIKKYCTVVRVLAHTQIRKTPLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGGSVA+KVDF    FEK + ID++F++DE+ID+I VTKG G+ GV +RWG  +L
Sbjct: 180 MEIQINGGSVAEKVDFGKDLFEKPVSIDSIFEQDEVIDVIAVTKGHGFSGVTSRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++GK   E  SA TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPSHVQWTVARAGQEGYHHRTSVNHKVYRIGKGDAED-SASTE 298

Query: 287 FDRSVYLLSSLMG 299
            D +   ++ L G
Sbjct: 299 TDVTKKKITPLGG 311


>gi|342874075|gb|EGU76148.1| hypothetical protein FOXB_13320 [Fusarium oxysporum Fo5176]
          Length = 391

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 196/313 (62%), Positives = 247/313 (78%), Gaps = 16/313 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSL +LPRKRA+RHRGKVK+FPKDDP KP  LTA +GYKAGMT IVRD+
Sbjct: 1   MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+K +KKE  EAVTI++TPP++VVG+VGY++TPRGLRSL TVWA+HL++E++RRFYK
Sbjct: 61  DRPGAKANKKEIVEAVTIVDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDELKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK+  ++G   I  +LE++KKYCTV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKKHSENNG-ASITRELERIKKYCTVVRVLAHTQIRKTPLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGS+A KV F    FEK + I ++F++DEMID++ VTKG G+EGV  RWG  +L
Sbjct: 180 MEIQVNGGSIADKVSFGQELFEKPVDISSIFEQDEMIDVVAVTKGHGFEGVTARWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N KIY++GK   + ++A TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPSHVQWTVARAGQRGYHHRTSVNHKIYRIGKGDADDNAA-TE 298

Query: 287 FDRSVYLLSSLMG 299
            D +   ++ L G
Sbjct: 299 IDVTKKTITPLGG 311


>gi|384497998|gb|EIE88489.1| 60S ribosomal protein L3 [Rhizopus delemar RA 99-880]
          Length = 387

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 199/315 (63%), Positives = 247/315 (78%), Gaps = 18/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHG LGF PRKR   HRG+VKA+PKDD  KP  LTAF+GYKAGMTHIVRD+
Sbjct: 1   MSHRKYEAPRHGHLGFGPRKRTRSHRGRVKAYPKDDAKKPVHLTAFMGYKAGMTHIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           E+PGSK+HKKE  EAVT+IE P +V+VGVVGYV+TPRGLRSL TVWA+HL+EE +RRFYK
Sbjct: 61  ERPGSKMHKKEIVEAVTVIEAPAMVIVGVVGYVETPRGLRSLTTVWAEHLSEEAKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW +SKKKAFTKY +KY   +G KD+  +LE++KKYC+V+R              +KAH+
Sbjct: 121 NWYRSKKKAFTKYAQKYA--EGAKDVTRELERIKKYCSVVRVIAHTQISKAKLHQRKAHI 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGGSV QKVDFA   FEK++ + ++F++DEMIDII  TKG G+EGV  RWG  +L
Sbjct: 179 MEIQLNGGSVEQKVDFAREHFEKEVTVGSIFEQDEMIDIIATTKGHGFEGVTHRWGTKKL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHP+RV ++VARAGQ GYH RTE+NKKIY++   + ++ S  TE
Sbjct: 239 PRKTHRGLRKVACIGAWHPSRVMYSVARAGQRGYHRRTEINKKIYRIATGA-DAKSGTTE 297

Query: 287 FDRSVYLLSSLMGSF 301
           +D +   ++  MG F
Sbjct: 298 YDLTEKQITP-MGGF 311


>gi|387914664|gb|AFK10941.1| 60S ribosomal protein L3 [Callorhinchus milii]
          Length = 403

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 197/319 (61%), Positives = 252/319 (78%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR  RHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRCRRHRGKVKSFPKDDPSKPIHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVT+IETPP+V+VG+VGYV+TPRGLR+  TV+A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTVIETPPMVIVGLVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ ++GKK ++     MKKYC VIR              KK+H+
Sbjct: 121 NWYKSKKKAFTKYCKKWQDEEGKKQLEKDFASMKKYCQVIRVLAHTQMRLLPLRQKKSHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG++A+K+D+A    E+Q+ ++ VF +DEM+D+IGVTKG G++GV +RW   +L
Sbjct: 181 MEIQVNGGTIAEKIDWAREKLEQQVAVNTVFGQDEMVDVIGVTKGHGFKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+Y++G            
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKVYRVGMGYHNKEGKVVK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A TE+D +   ++ L G
Sbjct: 301 NNASTEYDLTDKSINPLGG 319


>gi|350424727|ref|XP_003493892.1| PREDICTED: 60S ribosomal protein L3-like [Bombus impatiens]
          Length = 414

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 198/321 (61%), Positives = 248/321 (77%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP  LTAF+GYKAGMTH+VR+ 
Sbjct: 1   MSHRKFSAPRHGSMGFYPKKRSQRHRGKVKAFPKDDPSKPVHLTAFVGYKAGMTHVVREA 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+E PP++VVGVVGY++TP GLR+L TVWA+HL+E+ RRRFYK
Sbjct: 61  DRPGSKVNKKEIVEAVTILEAPPMIVVGVVGYIETPHGLRALTTVWAEHLSEDCRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTK +KK++ D G+K I++   K+ KYC V+R              KKAH+
Sbjct: 121 NWYKSKKKAFTKASKKWQDDLGRKSIESDFAKIIKYCKVVRIIAHTQMKLLRQRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG++  KV +A    E  +P++ VF  DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQLNGGTIVDKVQWAREHLENPVPVNNVFAPDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G+           
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGKIVK 300

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           ++A TE+D +   ++  MG F
Sbjct: 301 NNASTEYDLTEKTITP-MGGF 320


>gi|189240524|ref|XP_971875.2| PREDICTED: similar to ribosomal protein L3e [Tribolium castaneum]
 gi|270011378|gb|EFA07826.1| hypothetical protein TcasGA2_TC005395 [Tribolium castaneum]
          Length = 409

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 202/321 (62%), Positives = 247/321 (76%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP  LTAF+GYKAGMTH+VR+ 
Sbjct: 1   MSHRKFSAPRHGSMGFYPKKRSQRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREA 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+++VGVVGY++TP GLR+L T+WA+HL+E+ RRRFYK
Sbjct: 61  DRPGSKINKKEIVEAVTILETPPMMIVGVVGYIETPHGLRALATIWAEHLSEDCRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTK +KK+  D GKK I+   +K+ KYC V+R              KKAH+
Sbjct: 121 NWYKSKKKAFTKASKKWNDDLGKKSIERDFKKIIKYCKVVRVIAHTQMKLLNQRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGGSV  KV +A    EK IP+  VF +DEMID IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQLNGGSVVDKVQWAREHLEKPIPVAQVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G            
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGAGIHTKDGKVIK 300

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           ++A TE+D +   ++  MG F
Sbjct: 301 NNASTEYDLTEKTITP-MGGF 320


>gi|400594267|gb|EJP62123.1| 60S ribosomal protein L3 [Beauveria bassiana ARSEF 2860]
          Length = 392

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 198/313 (63%), Positives = 244/313 (77%), Gaps = 16/313 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK E PRHGSL +LPRKRA+RHRGKVK+FPKDDP KP  LTA +GYKAGMT IVRD 
Sbjct: 1   MSHRKHEEPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDS 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+K +KKE  EAVTI++TPP++VVG+VGY++TPRGLRSL TVWA+HL++E++RRFYK
Sbjct: 61  DRPGAKSNKKEVVEAVTIVDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDELKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK+    G   I  +LE+MKKYCTV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKKHSESSG-ASIARELERMKKYCTVVRVLAHTQIRKTPLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGS++ KVDF    FEK + +D++F++DEMID+I VTKG G+ GV  RWG  +L
Sbjct: 180 MEIQVNGGSISDKVDFGKELFEKPVSVDSIFEQDEMIDVIAVTKGHGFTGVTARWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP  V +TVARAGQ+GYHHRT +N K+Y++GKA  E  SA T+
Sbjct: 240 PRKTHKGLRKVACIGAWHPNHVQWTVARAGQDGYHHRTSVNHKVYRIGKAGAED-SASTD 298

Query: 287 FDRSVYLLSSLMG 299
            D +   ++ L G
Sbjct: 299 MDITKKKITPLGG 311


>gi|357443615|ref|XP_003592085.1| L3 Ribosomal protein [Medicago truncatula]
 gi|355481133|gb|AES62336.1| L3 Ribosomal protein [Medicago truncatula]
          Length = 337

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 210/264 (79%), Positives = 233/264 (88%), Gaps = 16/264 (6%)

Query: 53  MTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNE 112
           MTHIVR+VEKPGSKLHKKETCE VTIIETPP+VVVGVVGYVKTPRGLR+L TVW QHL+E
Sbjct: 1   MTHIVREVEKPGSKLHKKETCEPVTIIETPPMVVVGVVGYVKTPRGLRTLNTVWTQHLSE 60

Query: 113 EVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR----------- 161
           E++RRFYKNWCKSKKKAF+KY+K+YE+D+GKK+IQ QLEK+KKY TVIR           
Sbjct: 61  EIKRRFYKNWCKSKKKAFSKYSKQYESDEGKKNIQTQLEKLKKYATVIRVLAHTQIRKMK 120

Query: 162 ----KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGV 217
               KKAH+MEIQVNGG++AQKVDFAY FFEKQ+PIDAVFQKDEMIDIIGVTKGKGYEGV
Sbjct: 121 GLKQKKAHIMEIQVNGGTIAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGV 180

Query: 218 VTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAS 277
           VTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKKIYKLGK  
Sbjct: 181 VTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKLGKVG 240

Query: 278 QESHSAMTEFDRSVYLLSSLMGSF 301
           +E+H A TEFDR+   ++  MG F
Sbjct: 241 EETHDAQTEFDRTEKDITP-MGGF 263


>gi|1350745|sp|P49149.2|RL3_TOXCA RecName: Full=60S ribosomal protein L3
 gi|596082|gb|AAA92285.1| ribosomal protein L3 [Toxocara canis]
          Length = 402

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 195/290 (67%), Positives = 237/290 (81%), Gaps = 14/290 (4%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+GF P+KR+ RHRGKVKAFPKDDP+KP  LTAF+ +KAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSMGFTPKKRSKRHRGKVKAFPKDDPTKPIHLTAFIAFKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           +KPGSK++KKE  EAVTI E PP+V+VG+VGY+ TPRG R   TVWA+HL+E+ R RFYK
Sbjct: 61  DKPGSKVNKKEVVEAVTIFEAPPMVIVGIVGYIDTPRGPRQFKTVWAEHLSEDCRGRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW  SKKKAF K+ KK++ +DG+K I+A L KMKKYC+ IR              KKAH+
Sbjct: 121 NWHTSKKKAFQKHAKKWQDEDGRKSIEADLNKMKKYCSKIRVIAHTQMKVMKHREKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG+VA+KVD+A    EKQ+P+D+VF +DEMID IGVTKGKG++GV +RW   +L
Sbjct: 181 MEIQINGGTVAEKVDWAREHLEKQVPVDSVFAQDEMIDCIGVTKGKGFKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA 276
           PRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYHHRTE+NKKIY+LGK+
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEVNKKIYRLGKS 290


>gi|389744357|gb|EIM85540.1| 60S ribosomal protein L3 [Stereum hirsutum FP-91666 SS1]
          Length = 388

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 205/315 (65%), Positives = 257/315 (81%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSLGFLPRKRA+RHRGKVK+FPKDDP KP  LTA +GYKAGMTH+VRD+
Sbjct: 1   MSHRKYEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAIMGYKAGMTHVVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  EAVT++ETPPL+VVGVVGYV+TPRGLR+L TVWA HL++E++RRFYK
Sbjct: 61  DRPGSKMHKREVVEAVTVVETPPLIVVGVVGYVETPRGLRTLTTVWASHLSDELKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW +SKKKAFT+Y KK+  D+G K I  +LE+++KYCTV+R              KKAHL
Sbjct: 121 NWYRSKKKAFTRYAKKHAEDNG-KSITRELERIRKYCTVVRVLAHTQIRKTGLAQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGSV  KV+FA+G FEK + + +VF++DE+ID+I VTKG G+EGV  RWG  +L
Sbjct: 180 MEIQVNGGSVTDKVEFAHGLFEKPVEVGSVFEQDEVIDVIAVTKGHGFEGVTHRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE+NKKIY++G  + +  +A TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTELNKKIYRIGLGTDDG-NASTE 298

Query: 287 FDRSVYLLSSLMGSF 301
            D +   ++  MG F
Sbjct: 299 SDITKKTITP-MGGF 312


>gi|242219392|ref|XP_002475476.1| 60S ribosomal protein L3 [Postia placenta Mad-698-R]
 gi|220725335|gb|EED79327.1| 60S ribosomal protein L3 [Postia placenta Mad-698-R]
          Length = 388

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 206/315 (65%), Positives = 259/315 (82%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSLGFLPRKRA+RHRGKVKAFPKDD  KP  LTA +GYKAGMTH+VRD+
Sbjct: 1   MSHRKYEAPRHGSLGFLPRKRAARHRGKVKAFPKDDAQKPVHLTAIMGYKAGMTHVVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  EAV+IIETPP+VVVGVVGYV+TPRGLR+L TVWA HL++E++RRFYK
Sbjct: 61  DRPGSKMHKREVVEAVSIIETPPMVVVGVVGYVETPRGLRTLTTVWASHLSDELKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW +SKKKAFT+Y KK+  +DG K I  +LE+++KYCTV+R              KKAHL
Sbjct: 121 NWYRSKKKAFTRYAKKH-AEDGGKSIGRELERIRKYCTVVRVLAHTQIRKTGLSQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGSVA KV+FA+G FEK + +  VF++DE++D+I VTKG G+EGV  RWG  +L
Sbjct: 180 MEIQVNGGSVADKVEFAHGLFEKPVEVSTVFEQDEVVDVIAVTKGHGFEGVTHRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE+NKKIY++G + +++ +A TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTELNKKIYRIG-SGEDTGNASTE 298

Query: 287 FDRSVYLLSSLMGSF 301
            D +  +++  MG F
Sbjct: 299 HDITKKVITP-MGGF 312


>gi|345480304|ref|XP_001600115.2| PREDICTED: 60S ribosomal protein L3-like [Nasonia vitripennis]
          Length = 426

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 203/324 (62%), Positives = 250/324 (77%), Gaps = 27/324 (8%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+GF P+KR+ RHRGKVKAFPKDDP+KP  LTAF+GYKAGMTH+VR+ 
Sbjct: 1   MSHRKFSAPRHGSMGFYPKKRSQRHRGKVKAFPKDDPTKPVHLTAFIGYKAGMTHVVREA 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP++VVGVVGY++TP GLR+L TVWA+HL+E+ RRRFYK
Sbjct: 61  DRPGSKVNKKEIVEAVTILETPPMIVVGVVGYIETPHGLRALTTVWAEHLSEDCRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTK +KK++ D G+  I+   +K+ KYC V+R              KKAH+
Sbjct: 121 NWYKSKKKAFTKASKKWQDDLGRASIEKDFKKIVKYCKVVRVIAHTQMKLLRQRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG++  KV +A    EK IP++ VF  DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQVNGGTIEDKVKWAREHLEKSIPVNNVFAPDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHS---- 282
           PRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G   QE H+    
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG---QEIHTKDGK 297

Query: 283 -----AMTEFDRSVYLLSSLMGSF 301
                A TE+D +   ++  MG F
Sbjct: 298 IVKNNASTEYDLTEKSITP-MGGF 320


>gi|268564071|ref|XP_002647082.1| C. briggsae CBR-RPL-3 protein [Caenorhabditis briggsae]
 gi|60393717|sp|Q9NBK4.2|RL3_CAEBR RecName: Full=60S ribosomal protein L3
          Length = 401

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 197/318 (61%), Positives = 247/318 (77%), Gaps = 18/318 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHG +GF P+KR+  +RG++KAFPKDD SKP  LTAFLGYKAGMTHIVRDV
Sbjct: 1   MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDASKPIHLTAFLGYKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           +KPGSK++KKE  EAV+IIETPP+V+ GV GY+ TP+G R+L T+WA+HL+EE RRRFY 
Sbjct: 61  DKPGSKVNKKEVVEAVSIIETPPMVIAGVTGYIDTPQGPRALTTIWAEHLSEEARRRFYS 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ +DGKK I+A   K+KKYC+ IR              KKAHL
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           +EIQ+NGG++ QKVD+A    EKQI +D VF +DEMID IGVTKG G++GV +RW   +L
Sbjct: 181 VEIQINGGTIEQKVDWAREHLEKQIQVDTVFSQDEMIDTIGVTKGHGFKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAS---QESHSA 283
           PRKTH+GLRKVACIGAWHP+RV+FTVARAGQ G+HHRT +N KIY++GK++   +  ++ 
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNNG 300

Query: 284 MTEFDRSVYLLSSLMGSF 301
            TEFD +   ++  MG F
Sbjct: 301 STEFDLTQKTINP-MGGF 317


>gi|392881234|gb|AFM89449.1| 60S ribosomal protein L3 [Callorhinchus milii]
          Length = 403

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 197/319 (61%), Positives = 251/319 (78%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR  RHRGKVK FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRCRRHRGKVKGFPKDDPSKPIHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVT+IETPP+V+VG+VGYV+TPRGLR+  TV+A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTVIETPPMVIVGLVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ ++GKK ++     MKKYC VIR              KK+H+
Sbjct: 121 NWYKSKKKAFTKYCKKWQDEEGKKQLEKDFASMKKYCQVIRVLAHTQMRLLPLRQKKSHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG++A+K+D+A    E+Q+ ++ VF +DEMID+IGVTKG G++GV +RW   +L
Sbjct: 181 MEIQVNGGTIAEKIDWAREKLEQQVAVNTVFGQDEMIDVIGVTKGHGFKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NK++Y++G            
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKRVYRVGMGYHNKEGKVVK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A TE+D +   ++ L G
Sbjct: 301 NNASTEYDLTDKSINPLGG 319


>gi|156359547|ref|XP_001624829.1| predicted protein [Nematostella vectensis]
 gi|156211631|gb|EDO32729.1| predicted protein [Nematostella vectensis]
          Length = 406

 Score =  417 bits (1072), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 206/322 (63%), Positives = 247/322 (76%), Gaps = 22/322 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSLGFLPRKR  RHRGKVK+FPKDD + P  LTAF+G+KAGMTHI+R+V
Sbjct: 1   MSHRKFEAPRHGSLGFLPRKRCKRHRGKVKSFPKDDNTLPPHLTAFIGFKAGMTHILREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKL+KKE  EAVTIIETPP++VVGVVGY++TPRG+R L T+WA+HL+EE +RRFYK
Sbjct: 61  EKPGSKLNKKEKVEAVTIIETPPMMVVGVVGYIETPRGMRVLKTIWAEHLSEECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NWC SKKKAFTK +K++  DDGKK I+     MKKYC VIR              KKAH+
Sbjct: 121 NWCNSKKKAFTKASKRWADDDGKKSIEEDFNTMKKYCKVIRVICHTQQKLLKMRQKKAHI 180

Query: 167 MEIQVNGG-SVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           MEIQVNGG  VA+KVD+     E   P+  VF  DEMID+IGVTKG G++GV  RWG  +
Sbjct: 181 MEIQVNGGKDVAEKVDWCRERLENPAPVRKVFSPDEMIDVIGVTKGHGFKGVTYRWGTKK 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 279
           LPRKTH+GLRKVACIGAWHPARVSF+VARAGQ GYHHRTE+NKKIY++G+   +      
Sbjct: 241 LPRKTHKGLRKVACIGAWHPARVSFSVARAGQAGYHHRTELNKKIYRIGQGIHKKDGKVI 300

Query: 280 SHSAMTEFDRSVYLLSSLMGSF 301
            ++A TE+D +   ++  MG F
Sbjct: 301 KNNASTEYDLTDKSITP-MGGF 321


>gi|71984538|ref|NP_001021254.1| Protein RPL-3, isoform a [Caenorhabditis elegans]
 gi|1710557|sp|P50880.1|RL3_CAEEL RecName: Full=60S ribosomal protein L3
 gi|1181129|emb|CAA93269.1| ribosomal protein L3 [Caenorhabditis elegans]
 gi|1181131|emb|CAA93268.1| ribosomal protein L3 [Caenorhabditis elegans]
 gi|3875827|emb|CAA90183.1| Protein RPL-3, isoform a [Caenorhabditis elegans]
          Length = 401

 Score =  417 bits (1072), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 197/318 (61%), Positives = 247/318 (77%), Gaps = 18/318 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHG +GF P+KR+  +RG++KAFPKDD SKP  LTAFLGYKAGMTHIVRDV
Sbjct: 1   MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           +KPGSK++KKE  EAVTI+ETPP+V+ GV GYV TP+G R+L T+WA+HL+EE RRRFY 
Sbjct: 61  DKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYS 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ +DGKK I+A   K+KKYC+ IR              KKAHL
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           +EIQVNGG++ QKVD+A    EKQ+ +D VF +DEMID IGVT+G G++GV +RW   +L
Sbjct: 181 VEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAS---QESHSA 283
           PRKTH+GLRKVACIGAWHP+RV+FTVARAGQ G+HHRT +N KIY++GK++   +  ++ 
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNNG 300

Query: 284 MTEFDRSVYLLSSLMGSF 301
            TEFD +   ++  MG F
Sbjct: 301 STEFDLTQKTITP-MGGF 317


>gi|307107912|gb|EFN56153.1| hypothetical protein CHLNCDRAFT_35097 [Chlorella variabilis]
          Length = 386

 Score =  417 bits (1071), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 218/315 (69%), Positives = 257/315 (81%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSLGFLP+KR  R +GKVK+FPKDD +KP  LTAF+GYKAGMTHIVRDV
Sbjct: 1   MSHRKFEAPRHGSLGFLPKKRCKRGKGKVKSFPKDDQTKPPHLTAFMGYKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKE  EAVTIIETPP+VVVG+VGYVKT RG+RSL TVWA+HL+EEV+RRFYK
Sbjct: 61  EKPGSKLHKKEAAEAVTIIETPPMVVVGIVGYVKTTRGMRSLNTVWAEHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           +W KSKKKAFTKY KKY   DGKK+++A++ ++KK+C VIR              KKAHL
Sbjct: 121 SWYKSKKKAFTKYVKKYA--DGKKEVEAEVAELKKHCCVIRVLAHTQIRKVPVGQKKAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGSVA KVDFAYG  EK + ++ VF + EM+D I +TKG G EGVVTRWGV+RL
Sbjct: 179 MEIQVNGGSVAAKVDFAYGLLEKAVSVNTVFNQSEMVDAIAITKGHGTEGVVTRWGVSRL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPARV +TVAR+G  G++HRTEMNKK+Y++G   +ESH+A TE
Sbjct: 239 PRKTHRGLRKVACIGAWHPARVGWTVARSGAMGFNHRTEMNKKVYRIGVKGEESHAATTE 298

Query: 287 FDRSVYLLSSLMGSF 301
            D +V  ++  MG F
Sbjct: 299 HDVTVKDITP-MGGF 312


>gi|294954638|ref|XP_002788244.1| 60S ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
 gi|239903507|gb|EER20040.1| 60S ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
          Length = 385

 Score =  417 bits (1071), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 203/315 (64%), Positives = 238/315 (75%), Gaps = 22/315 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSLGFLPRKR   H+GKVK+FPKDD SKPC LTAF+GYKAGMTHIVRDV
Sbjct: 1   MSHRKFEVPRHGSLGFLPRKRTRHHKGKVKSFPKDDQSKPCHLTAFMGYKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           +KPGSKLH+KE  EAVT++E PP+V VG VGYV+TP GLR+L TVWA+HL++EVRRRFYK
Sbjct: 61  DKPGSKLHRKEVVEAVTVLEAPPMVCVGFVGYVETPNGLRALTTVWAKHLSDEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW  SKKKAF+KY         +KD  A++++ KKYC V+R              KKAH+
Sbjct: 121 NWYHSKKKAFSKYQ--------EKDHDAEVQRCKKYCQVVRAIMHTQVSKVKLTQKKAHI 172

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           +E+QVNGGSV+ KVDF    FEK++PI +VF KDEM+DIIGVTKG G   V TRWGVTRL
Sbjct: 173 VEVQVNGGSVSDKVDFCQSLFEKEVPISSVFDKDEMVDIIGVTKGHGNTSVTTRWGVTRL 232

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
            RKTHRGLRKVACIGAWHPARV F V RAGQ GYHHR E+NKKIY++GKA +E  +    
Sbjct: 233 ARKTHRGLRKVACIGAWHPARVQFQVPRAGQMGYHHRVEINKKIYRIGKALREDPNNAAG 292

Query: 287 FDRSVYLLSSLMGSF 301
            +       + MG F
Sbjct: 293 SNDLTQKAITPMGGF 307


>gi|294867277|ref|XP_002765039.1| 60S ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
 gi|239864919|gb|EEQ97756.1| 60S ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
          Length = 385

 Score =  417 bits (1071), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 203/315 (64%), Positives = 238/315 (75%), Gaps = 22/315 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSLGFLPRKR   H+GKVK+FPKDD SKPC LTAF+GYKAGMTHIVRDV
Sbjct: 1   MSHRKFEVPRHGSLGFLPRKRTRHHKGKVKSFPKDDQSKPCHLTAFMGYKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           +KPGSKLH+KE  EAVT++E PP+V VG VGYV+TP GLR+L TVWA+HL++EVRRRFYK
Sbjct: 61  DKPGSKLHRKEVVEAVTVLEAPPMVCVGFVGYVETPNGLRALTTVWAKHLSDEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW  SKKKAF+KY         +KD  A++++ KKYC V+R              KKAH+
Sbjct: 121 NWYHSKKKAFSKYQ--------EKDHDAEVQRCKKYCQVVRAIMHTQVSKVKLTQKKAHI 172

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           +E+QVNGGSV+ KVDF    FEK++PI +VF KDEM+DIIGVTKG G   V TRWGVTRL
Sbjct: 173 VEVQVNGGSVSDKVDFCQSLFEKEVPISSVFDKDEMVDIIGVTKGHGNTSVTTRWGVTRL 232

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
            RKTHRGLRKVACIGAWHPARV F V RAGQ GYHHR E+NKKIY++GKA +E  +    
Sbjct: 233 ARKTHRGLRKVACIGAWHPARVQFQVPRAGQMGYHHRVEINKKIYRIGKALREDPNNAAG 292

Query: 287 FDRSVYLLSSLMGSF 301
            +       + MG F
Sbjct: 293 SNDLTQKAITPMGGF 307


>gi|440798172|gb|ELR19240.1| ribosomal protein L3, putative [Acanthamoeba castellanii str. Neff]
          Length = 398

 Score =  417 bits (1071), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 202/321 (62%), Positives = 242/321 (75%), Gaps = 22/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGF PRKRA+RHRGK K FPKDD SK   LTAFL YKAGMTH+VRD+
Sbjct: 1   MSHRKFSAPRHGSLGFTPRKRAARHRGKCKTFPKDDASKKPHLTAFLAYKAGMTHVVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           +KPGS++HK+E  EAVTI+E PP+VVVG+VGY+ TP G+R+L TVWAQHL+ E  RRFYK
Sbjct: 61  DKPGSRMHKREVVEAVTILEAPPMVVVGIVGYIDTPSGMRTLTTVWAQHLSAECLRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW +SKKKAFTKY K    +  +     ++ ++KKYCTV+R              KKAH+
Sbjct: 121 NWYRSKKKAFTKYQKALAANKARV-FDREVARLKKYCTVVRVIAHTQVRKLNQRQKKAHI 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGS+A KVDFA    EK +P+D VF   E++D IGVTKGKGYEGV TRWGVTRL
Sbjct: 180 MEIQVNGGSIADKVDFAVSLLEKPVPVDNVFGDSELVDTIGVTKGKGYEGVTTRWGVTRL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------ 280
           PRKTHRGLRKVACIGAWHPA V ++V RAGQNGYHHRTE+NKKIY++GK  ++       
Sbjct: 240 PRKTHRGLRKVACIGAWHPAAVQWSVPRAGQNGYHHRTELNKKIYRIGKGVRQEGGKIVH 299

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           ++A TEFD +   ++  MG F
Sbjct: 300 NNASTEFDLTEKSITP-MGGF 319


>gi|112982798|ref|NP_001037126.1| ribosomal protein L3 [Bombyx mori]
 gi|54609193|gb|AAV34812.1| ribosomal protein L3 [Bombyx mori]
          Length = 413

 Score =  416 bits (1070), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 201/321 (62%), Positives = 251/321 (78%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP  LTAF+GYKAGMTH+VR+ 
Sbjct: 1   MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTIIETPP+V VGVVGY++TP GLR+L TVWA+H++E+ RRRFYK
Sbjct: 61  DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW K KKKAFTK +KK++ + G+K I+   +KM +YC+V+R              KKAH+
Sbjct: 121 NWYKCKKKAFTKASKKWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG++  KV +A    EK IP+D+VF +DEMID IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G+   +       
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIK 300

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           ++A TE+D S   ++  MG F
Sbjct: 301 NNASTEYDLSEKSITP-MGGF 320


>gi|355769998|gb|EHH62843.1| hypothetical protein EGM_19535, partial [Macaca fascicularis]
          Length = 403

 Score =  416 bits (1070), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 203/318 (63%), Positives = 251/318 (78%), Gaps = 20/318 (6%)

Query: 2   SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
           SHRKF  PRHGSLGFLPRK + RHRGKVK+F KDDPSKP  LTAFLGYKAGM HIVR+V+
Sbjct: 2   SHRKFSAPRHGSLGFLPRKLSIRHRGKVKSFHKDDPSKPVHLTAFLGYKAGMAHIVREVD 61

Query: 62  KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
           +PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  TV+A+H+++E +RRFYKN
Sbjct: 62  RPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKN 121

Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLM 167
           W KSKKKAFTK+ KK++ +DGKK ++     MKKYC VIR              KKAHLM
Sbjct: 122 WHKSKKKAFTKHCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHLM 181

Query: 168 EIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 227
           EIQVNGG+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW   +LP
Sbjct: 182 EIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP 241

Query: 228 RKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQESH 281
           RKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHH TE+NKKIYK+G+           +
Sbjct: 242 RKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHCTEINKKIYKIGQGYLIKDGKLIKN 301

Query: 282 SAMTEFDRSVYLLSSLMG 299
           +A T++D S   ++ L G
Sbjct: 302 NASTDYDLSDKSINPLGG 319


>gi|409079895|gb|EKM80256.1| hypothetical protein AGABI1DRAFT_84723 [Agaricus bisporus var.
           burnettii JB137-S8]
 gi|426198339|gb|EKV48265.1| hypothetical protein AGABI2DRAFT_135382 [Agaricus bisporus var.
           bisporus H97]
          Length = 388

 Score =  416 bits (1070), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 203/315 (64%), Positives = 259/315 (82%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSLGFLPRKR++RHRGKVK+FPKDDP KP  LTA++GYKAGMTH+VRD+
Sbjct: 1   MSHRKYEAPRHGSLGFLPRKRSARHRGKVKSFPKDDPKKPVHLTAYMGYKAGMTHVVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           E+PGSK+HK+E  EAVTI+ETPP++VVGVVGYV+TPRGLR+L TVWA HL++E++RRFYK
Sbjct: 61  ERPGSKMHKREIVEAVTIVETPPMMVVGVVGYVETPRGLRTLTTVWANHLSDELKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW +SKKKAFT+Y KK+  +DG K I  +LE+++KYCTV+R              KKAHL
Sbjct: 121 NWYRSKKKAFTRYAKKH-AEDGGKSIGRELERIRKYCTVVRVLAHTQIRKTPLSQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGS+A KV+FA+G FEK + I  +F++DE++D+I VTKG G+EGV  RWG  +L
Sbjct: 180 MEIQVNGGSIADKVEFAHGLFEKPVEISTIFEQDEVVDVIAVTKGHGFEGVTHRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE+NKKI+++G  + ++ +A TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTELNKKIFRVGSGADDA-NASTE 298

Query: 287 FDRSVYLLSSLMGSF 301
            D +   ++  MG F
Sbjct: 299 ADATKKSITP-MGGF 312


>gi|341889604|gb|EGT45539.1| CBN-RPL-3 protein [Caenorhabditis brenneri]
          Length = 401

 Score =  416 bits (1070), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 196/318 (61%), Positives = 247/318 (77%), Gaps = 18/318 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHG +GF P+KR+  +RG++KAFPKDD SKP  LTAFLGYKAGMTHIVRDV
Sbjct: 1   MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDASKPIHLTAFLGYKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           +KPGSK++KKE  EAVTI+ETPP+V+ GV GY+ TP+G R+L T+WA+HL+EE RRRFY 
Sbjct: 61  DKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYIDTPQGPRALTTIWAEHLSEEARRRFYS 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ +DGKK I++   K+KKYC+ IR              KKAHL
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIESDFAKLKKYCSSIRVIAHTQMKILRRRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           +EIQVNGG++ QKVD+A    EKQI +D VF +DEMID IGVT+G G++GV +RW   +L
Sbjct: 181 VEIQVNGGTIEQKVDWAREHLEKQIQVDTVFSQDEMIDTIGVTRGHGFKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAS---QESHSA 283
           PRKTH+GLRKVACIGAWHP+RV+FTVARAGQ G+HHRT +N KIY++GK++   +  ++ 
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNNG 300

Query: 284 MTEFDRSVYLLSSLMGSF 301
            TEFD +   ++  MG F
Sbjct: 301 STEFDLTQKTINP-MGGF 317


>gi|392580132|gb|EIW73259.1| hypothetical protein TREMEDRAFT_37246 [Tremella mesenterica DSM
           1558]
          Length = 390

 Score =  416 bits (1070), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 193/313 (61%), Positives = 250/313 (79%), Gaps = 16/313 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PR GSL FLP+KRA+RHRG+VK+FPKDDP KP  LTA LGYKAGMTH+VRD+
Sbjct: 1   MSHRKYEEPRSGSLAFLPKKRAARHRGRVKSFPKDDPKKPVHLTAMLGYKAGMTHVVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  EAVT+IETPP+V+VGVVGY++TPRGLRSL TVWA+HL++E++RRFY+
Sbjct: 61  DRPGSKMHKREVVEAVTVIETPPIVIVGVVGYIETPRGLRSLTTVWAEHLSDELKRRFYR 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFT+Y KK+  ++G + +  +LE++KKYCTV+R              KK+HL
Sbjct: 121 NWYKSKKKAFTRYAKKHSENNG-QSVARELERIKKYCTVVRVLAHTQLSKTGLVQKKSHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQVNGGSVA KV+FA   FEK++ ++++F+KDE+ID+I VTKG G  GV+ RWGVT+L
Sbjct: 180 AEIQVNGGSVADKVEFARSHFEKEVAVESIFEKDEVIDVIAVTKGHGVSGVIARWGVTKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRG RKVACIGAWHP++V F+VARAGQ GYH+R   N KIY++G A  +  +  T+
Sbjct: 240 PRKTHRGARKVACIGAWHPSKVMFSVARAGQRGYHNRRAQNLKIYRVG-AGNDPKNGSTD 298

Query: 287 FDRSVYLLSSLMG 299
           FD +   ++ L G
Sbjct: 299 FDITPKTINPLGG 311


>gi|392593174|gb|EIW82500.1| hypothetical protein CONPUDRAFT_81978 [Coniophora puteana
           RWD-64-598 SS2]
          Length = 388

 Score =  416 bits (1069), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 204/315 (64%), Positives = 257/315 (81%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSLGFLPRKRA+RHRGKVK+FPKDDP KP  LTA +GYKAGMTH+VRD+
Sbjct: 1   MSHRKYEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAIMGYKAGMTHVVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  EAV+I+ETPP++VVGVVGYV+TPRGLR+L TVWA HL++EV+RRFYK
Sbjct: 61  DRPGSKMHKREIVEAVSIVETPPMMVVGVVGYVETPRGLRTLTTVWANHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW +SKKKAFT+Y KK+  +DG K    +LE+++KYCTV+R              KKAHL
Sbjct: 121 NWYRSKKKAFTRYAKKH-AEDGGKSTARELERIRKYCTVVRVLSHTQIRKTGLSQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGS+A KV+FA G FEK   ++++F++DE+ID+I VTKG G+EGV  RWG  +L
Sbjct: 180 MEIQVNGGSIADKVEFAQGLFEKPFDVNSIFEQDEVIDVIAVTKGHGFEGVTHRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE+NKKIY++G  + E+ +A TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTELNKKIYRIGSGTDEA-NASTE 298

Query: 287 FDRSVYLLSSLMGSF 301
            D +   ++  MG F
Sbjct: 299 SDVTKKAITP-MGGF 312


>gi|321458193|gb|EFX69265.1| hypothetical protein DAPPUDRAFT_301006 [Daphnia pulex]
          Length = 416

 Score =  416 bits (1069), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 203/321 (63%), Positives = 247/321 (76%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+GF P+KR   HRG+VK+FP DDP KP  LTAFL YKAGMTHIVR+ 
Sbjct: 1   MSHRKFSAPRHGSMGFYPKKRCRSHRGRVKSFPHDDPKKPIHLTAFLAYKAGMTHIVREC 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           +KPGSK++KKE  EAVTI+ETPP+V+VG+VGYV TP+GLR+L TVWA+H+ E+ RRRFYK
Sbjct: 61  DKPGSKVNKKEVVEAVTILETPPMVIVGIVGYVATPKGLRALKTVWAEHIGEDCRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTK +KK++ D GKK I+ +L  MK+YC VIR              KKAH+
Sbjct: 121 NWYKSKKKAFTKASKKWQDDLGKKVIEKELRAMKRYCKVIRVIAHTQMKLLRQRQKKAHM 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+V QKVD+A    EK IPI ++F +DEMID+IGVTKGKG++GV +RW   +L
Sbjct: 181 MEIQVNGGTVRQKVDWARQHLEKTIPITSLFAQDEMIDVIGVTKGKGFKGVTSRWHTRKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYHHRTEMNKKIY++GK           
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEMNKKIYRIGKGIHTRKGKVIK 300

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           ++A TE+D +   ++  MG F
Sbjct: 301 NNAATEYDLTDKSITP-MGGF 320


>gi|430813862|emb|CCJ28827.1| unnamed protein product [Pneumocystis jirovecii]
          Length = 402

 Score =  416 bits (1069), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 212/315 (67%), Positives = 256/315 (81%), Gaps = 18/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSLGFLPRKRASRHRGKVK+FPKDDP KP  LTAF+GYKAGMTH+VRD+
Sbjct: 1   MSHRKYEAPRHGSLGFLPRKRASRHRGKVKSFPKDDPKKPIHLTAFMGYKAGMTHVVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+ LHKKE  EAVT+IETPPLVVVGVVGYV+TPRGLRSL TVWA+HL++E++RRFYK
Sbjct: 61  DRPGTILHKKEIVEAVTVIETPPLVVVGVVGYVETPRGLRSLTTVWAEHLSDEMKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFT+Y+KKY   +  K I  +LE++KKYCTV+R              KKAH+
Sbjct: 121 NWYKSKKKAFTRYSKKYS--ETSKPIARELERIKKYCTVVRIIVHTQIRKIPFGQKKAHV 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NG +V +KVD+A   FEK + + +VF++DEMID+IGVTKGKGYEGV TRWG  RL
Sbjct: 179 MEIQLNGETVDKKVDWARDHFEKTVDVKSVFEQDEMIDVIGVTKGKGYEGVTTRWGTRRL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPA V +TVARAGQNGYHHRT +N KIY++G +  +  +A T+
Sbjct: 239 PRKTHRGLRKVACIGAWHPAHVMWTVARAGQNGYHHRTSINHKIYRIG-SGDDPRNASTD 297

Query: 287 FDRSVYLLSSLMGSF 301
           FD +   ++  MG F
Sbjct: 298 FDITEKQITP-MGGF 311


>gi|332372868|gb|AEE61576.1| unknown [Dendroctonus ponderosae]
          Length = 411

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 199/321 (61%), Positives = 245/321 (76%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP  LTAFLGYKAGMTH+VR+ 
Sbjct: 1   MSHRKFSAPRHGSMGFYPKKRSKRHRGKVKAFPKDDPSKPVHLTAFLGYKAGMTHVVREA 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP++VVGV+GY++TP GLRSLCTVWA+HL EE RRRFYK
Sbjct: 61  DRPGSKINKKEIVEAVTILETPPMIVVGVIGYIETPHGLRSLCTVWAEHLAEECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSK+KAF+    K+    GKK I+ Q  K+ KYC+ +R              KKAH+
Sbjct: 121 NWYKSKRKAFSSNATKWHDALGKKAIEKQFNKIIKYCSAVRVIAHTQMKLLKQRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG++A KV +A    EK IP++ VF +DE+ID+IGVTKGKG++GV +RW   +L
Sbjct: 181 MEIQINGGTIADKVAWAKEHLEKPIPVNQVFGQDEVIDVIGVTKGKGFKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G            
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGAGIHTKDGKVIK 300

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           ++A T +D S   ++  MG F
Sbjct: 301 NNASTAYDLSEKTITP-MGGF 320


>gi|318087096|gb|ADV40140.1| putative ribosomal protein L3 isoform A [Latrodectus hesperus]
          Length = 303

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 192/290 (66%), Positives = 238/290 (82%), Gaps = 14/290 (4%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+GF+P+KR+ RHRGKVKAFPKDDPSKP  LTAF+GYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSMGFVPKKRSKRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           +KPGSK++KKE  E VTI+ETPP+V+VGVVGY++TP+GLR+L TVWA+HL+E+ +RRFYK
Sbjct: 61  DKPGSKVNKKEVVEPVTILETPPMVIVGVVGYIETPKGLRALKTVWAEHLSEDCKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY+KK+  + G+  I    +KM KYC VIR              KKAH+
Sbjct: 121 NWYKSKKKAFTKYSKKWAEEAGRVAINKDFKKMAKYCKVIRVIAHTQMKLMRKRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG+++QK+ +A    EK +P+  VF +DEMID+IGVTKGKG++GV +RW   +L
Sbjct: 181 MEIQLNGGNISQKIKWARDHLEKPVPLSQVFAQDEMIDVIGVTKGKGFKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA 276
           PRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYHHRTE+NKKIY++G+ 
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEINKKIYRIGQG 290


>gi|70909601|emb|CAJ17226.1| ribosomal protein L3e [Scarabaeus laticollis]
          Length = 410

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 199/321 (61%), Positives = 250/321 (77%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+GF P+KR+ RHRGKVKAFP+DDPSKP  LTAF+GYKAGMTH++R+ 
Sbjct: 1   MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPEDDPSKPVHLTAFIGYKAGMTHVLREA 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+V+VGVVGY++TP GLR+L TVWA+HL+E+ RRRFYK
Sbjct: 61  DRPGSKINKKEIVEAVTILETPPMVIVGVVGYIETPHGLRALATVWAEHLSEDCRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTK +KK++ + GKK I+  L+K+ KYC V+R              KKAH+
Sbjct: 121 NWYKSKKKAFTKASKKWQDELGKKSIERDLKKIVKYCKVVRVIAHTQMKLLKQRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG++  KV +A    EK IP++ VF +DEMID IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQLNGGTIDDKVKWAREHLEKPIPVNNVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G            
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGAGIHTKDGKVIK 300

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           ++A T++D +   ++  MG F
Sbjct: 301 NNASTQYDLTEKTITP-MGGF 320


>gi|225684621|gb|EEH22905.1| 60S ribosomal protein L3 [Paracoccidioides brasiliensis Pb03]
          Length = 384

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 198/304 (65%), Positives = 242/304 (79%), Gaps = 17/304 (5%)

Query: 12  GSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKE 71
           GSL FLPRKR++RHRGKVK+FPKDDP KP  LTA +GYKAGMT +VRD+E+PG+K+HKKE
Sbjct: 4   GSLAFLPRKRSARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTVVRDLERPGAKMHKKE 63

Query: 72  TCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFT 131
             EAVTI+ETPP++ VGVVGY++TPRGLRSL TVWA+HL++EV+RRFYKNW KSKKKAFT
Sbjct: 64  IVEAVTIVETPPMIAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYKNWYKSKKKAFT 123

Query: 132 KYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLMEIQVNGGSVA 177
           KY K +  + G   +  +LE++KKYCTV+R              KKAHLME+QVNGGS+A
Sbjct: 124 KYAKNHSENTG-ASVSRELERIKKYCTVVRLLAHTQIRKTPLKQKKAHLMEVQVNGGSIA 182

Query: 178 QKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKV 237
            KVDFA+G FEK I ID+VF++DEMID+I VTKG G+ GV +RWG  +LPRKTH+GLRKV
Sbjct: 183 DKVDFAHGLFEKPIQIDSVFEQDEMIDVIAVTKGHGFNGVTSRWGTKKLPRKTHKGLRKV 242

Query: 238 ACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRSVYLLSSL 297
           ACIGAWHP+ V +TVARAGQ+GYHHRT  N KIY++GK S E  +A TEFD S   ++  
Sbjct: 243 ACIGAWHPSHVQWTVARAGQDGYHHRTSCNHKIYRIGKGSDEG-NASTEFDVSKKQITP- 300

Query: 298 MGSF 301
           MG F
Sbjct: 301 MGGF 304


>gi|342319576|gb|EGU11523.1| 60S ribosomal protein L3 [Rhodotorula glutinis ATCC 204091]
          Length = 439

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 205/313 (65%), Positives = 251/313 (80%), Gaps = 15/313 (4%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+EHPR GSLGFLPRKRA+RHRGK K+FPKDD   P  LTAFLGYKAGMTH+VRD+
Sbjct: 50  MSHRKYEHPRCGSLGFLPRKRAARHRGKAKSFPKDDAKAPVHLTAFLGYKAGMTHVVRDL 109

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HKKE  EAVT+IETPP+VVVGVVGYV+TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 110 DRPGSKMHKKEVVEAVTVIETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 169

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW +SKKKAFTKY KK+        +  +LE++ KYCTV+R              KKAHL
Sbjct: 170 NWYRSKKKAFTKYAKKHAEQGSASSVARELERITKYCTVVRVLAHTQIRKTGLAQKKAHL 229

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGSVA KV+FA   FEK + + ++F++DE ID+IGVT+G G+EGV  RWG  +L
Sbjct: 230 MEIQVNGGSVADKVEFAKSHFEKTVDVSSIFEQDENIDVIGVTQGHGFEGVTHRWGTKKL 289

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP++V ++VARAGQ+GYHHRTE+NKK+Y++GKA  E  SA TE
Sbjct: 290 PRKTHKGLRKVACIGAWHPSKVMYSVARAGQDGYHHRTELNKKVYRIGKADDEG-SASTE 348

Query: 287 FDRSVYLLSSLMG 299
           FD +   ++ L G
Sbjct: 349 FDITKKAITPLGG 361


>gi|18253047|gb|AAL62468.1| ribosomal protein L3 [Spodoptera frugiperda]
          Length = 413

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 201/321 (62%), Positives = 249/321 (77%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+GF P+KR+ RHRGKVKAFPKDD SKP  LTAF+GYKAGMTH+VR+ 
Sbjct: 1   MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDASKPVHLTAFIGYKAGMTHVVREP 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTIIETPP+V VGVVGY++TP GLR+L TVWA+H++E+ RRRFYK
Sbjct: 61  DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW K KKKAFTK +KK++ + G+K I+   +KM +YC+V+R              KKAH+
Sbjct: 121 NWYKCKKKAFTKASKKWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG++  KV +A    EK IP+D+VF +DEMID IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQVNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G+           
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGKVIK 300

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           ++A TE+D S   ++  MG F
Sbjct: 301 NNASTEYDLSEKSITP-MGGF 320


>gi|388583632|gb|EIM23933.1| 60S ribosomal protein L3 [Wallemia sebi CBS 633.66]
          Length = 391

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 198/317 (62%), Positives = 249/317 (78%), Gaps = 19/317 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASR--HRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVR 58
           MSHRK+E PRHGSLGFLPRKR +    RGK K+FPKDD  KP  LT  +GYKAGMTH+VR
Sbjct: 1   MSHRKYEAPRHGSLGFLPRKRCTNVGARGKCKSFPKDDAKKPVHLTGLIGYKAGMTHVVR 60

Query: 59  DVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRF 118
           D+++PGSK+HK+E  E VTI+ETPP+ VVGVVGYV+TPRGLRSL TVWA+HL++E++RRF
Sbjct: 61  DLDRPGSKMHKREVVEPVTIVETPPMAVVGVVGYVETPRGLRSLTTVWAEHLSDELKRRF 120

Query: 119 YKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKA 164
           YKNW +SKKKAFTKY KK+  + G   I  ++E++KKYC V+R              KKA
Sbjct: 121 YKNWYRSKKKAFTKYAKKHSENSGA-SITREIERIKKYCQVVRVLAHTQVSKTSLKQKKA 179

Query: 165 HLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 224
           HLMEIQVNGGSV+ KVDFA   FEK +   +VF++DE+ID IG+TKG+GYEGV  RW VT
Sbjct: 180 HLMEIQVNGGSVSDKVDFAKSHFEKTVSASSVFEQDEVIDAIGITKGRGYEGVTKRWNVT 239

Query: 225 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAM 284
           RLPRKTH+GLRKVACIGAWHP+ V F+VAR+GQ+G+HHRTE+NKK+Y++G A ++ ++A 
Sbjct: 240 RLPRKTHKGLRKVACIGAWHPSNVMFSVARSGQDGFHHRTELNKKVYRIGSA-EDKNNAS 298

Query: 285 TEFDRSVYLLSSLMGSF 301
           TEFD +   ++  MG F
Sbjct: 299 TEFDPTEKQITP-MGGF 314


>gi|409049883|gb|EKM59360.1| hypothetical protein PHACADRAFT_205564 [Phanerochaete carnosa
           HHB-10118-sp]
          Length = 403

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 205/315 (65%), Positives = 258/315 (81%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSLGFLPRKRA+RHRGKVKAFPKDD  KP  LTA +GYKAGMTH+VRD+
Sbjct: 16  MSHRKYEAPRHGSLGFLPRKRAARHRGKVKAFPKDDIKKPVHLTAVMGYKAGMTHVVRDL 75

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  EAVT+IETPP+VVVGVVGYV+TPRGLR+L TVWA HL++E++RRFYK
Sbjct: 76  DRPGSKMHKREVVEAVTVIETPPMVVVGVVGYVETPRGLRTLTTVWASHLSDELKRRFYK 135

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW +SKKKAFT+Y KK  ++DG K +  +LE+++KYCTV+R              KKAHL
Sbjct: 136 NWYRSKKKAFTRYAKKV-SEDGGKSVTRELERIRKYCTVVRVLAHTQIRKTGLSQKKAHL 194

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGS+A KV+FA+G FEK  P+ +VF++DE++D+I VTKG G+EGV  RWG  +L
Sbjct: 195 MEIQVNGGSIADKVEFAHGLFEKPFPVTSVFEQDEVVDVIAVTKGHGFEGVTHRWGTKKL 254

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE+NKKIY++G + ++  +A TE
Sbjct: 255 PRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTELNKKIYRIG-SGEDVANASTE 313

Query: 287 FDRSVYLLSSLMGSF 301
            D +   ++  MG F
Sbjct: 314 SDITNKQITP-MGGF 327


>gi|225711234|gb|ACO11463.1| 60S ribosomal protein L3 [Caligus rogercresseyi]
          Length = 408

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 200/321 (62%), Positives = 248/321 (77%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+GF P+KR+ RHRGK KAFPKDDPSKP  LT FLGYKAGMTH+VR+ 
Sbjct: 1   MSHRKFSAPRHGSMGFYPKKRSRRHRGKAKAFPKDDPSKPVHLTCFLGYKAGMTHVVREA 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSKL+KKE  EAVT++ETPP+V +GVVGY++TPRGLR+L TVWA+H+ EE +RRFYK
Sbjct: 61  DRPGSKLNKKEIVEAVTVVETPPMVAIGVVGYIETPRGLRALKTVWAEHIGEEAKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTK  KK+E D GKK+I+  L+++ KY +V+R              KKAH+
Sbjct: 121 NWSKSKKKAFTKACKKWEDDLGKKEIEVDLKQIAKYSSVVRLICHTQQKLLKRRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGGS+  KV+FA   FEK+IPI +VF KDEMID IGVTKGKG++GV +RW   +L
Sbjct: 181 MEIQLNGGSILDKVNFAREHFEKEIPIRSVFTKDEMIDTIGVTKGKGFKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------ 280
           PRKTH+GLRKVACIGAWHP+R+ FTVARAGQ GYHHRTE+NKKIY + +           
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRIQFTVARAGQKGYHHRTEINKKIYDIRRGFHTENGKIVK 300

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           ++A TE+D +   ++  MG F
Sbjct: 301 NNASTEYDIADKSINP-MGGF 320


>gi|402244317|emb|CBW52776.1| 40S ribosomal protein L3 [Polytomella sp. Pringsheim 198.80]
          Length = 384

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 214/315 (67%), Positives = 248/315 (78%), Gaps = 19/315 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPR GSLGF PRKR  R RGKVK+FP+DD +KP  LTAF+GYKAGMTHIVRDV
Sbjct: 1   MSHRKFEHPRCGSLGFSPRKRCRRGRGKVKSFPRDDSAKPAHLTAFIGYKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCE VTIIE P +VVVGVVGY+KT RGLRSL  VWAQHL+++++R+FYK
Sbjct: 61  EKPGSKLHKKETCEPVTIIECPAMVVVGVVGYIKTTRGLRSLNAVWAQHLSDDLKRKFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKK AF  Y KKY   DGKK I+A+L ++KK+C+VIR              KK  L
Sbjct: 121 NWYKSKKAAFKNYAKKY---DGKK-IEAELAQLKKHCSVIRVLAHTQVRKLHWGQKKPQL 176

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           +EIQVNGGS++ KVDF Y  FEK++ +DAVFQ +E ID I +TKG G +GVV RWGVTRL
Sbjct: 177 IEIQVNGGSISDKVDFGYKLFEKEVTVDAVFQTNEQIDTIAITKGHGVQGVVQRWGVTRL 236

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPARV +TVARAGQ G+ HRTEMNKKIYK+GK    SHSA T+
Sbjct: 237 PRKTHRGLRKVACIGAWHPARVKWTVARAGQQGFFHRTEMNKKIYKIGKKDTASHSASTD 296

Query: 287 FDRSVYLLSSLMGSF 301
           FD +   ++  MG F
Sbjct: 297 FDVTKKDITP-MGGF 310


>gi|22203712|gb|AAM94270.1| ribosomal protein L3 [Azumapecten farreri]
          Length = 396

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 203/320 (63%), Positives = 246/320 (76%), Gaps = 21/320 (6%)

Query: 2   SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
           SHRKF  PRHGS GFLP+KRASRHRGKVKAFP DD SKP  LTAF+GYKAGM+HIVRDV+
Sbjct: 3   SHRKFSAPRHGSKGFLPKKRASRHRGKVKAFPTDDKSKPVHLTAFIGYKAGMSHIVRDVD 62

Query: 62  KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
           +PGSK +KKE  EAVTIIETPP+V+VG+VGY++TP GLRS  T++A+HLNE+ RRRFYKN
Sbjct: 63  RPGSKSNKKEIVEAVTIIETPPMVIVGLVGYIETPNGLRSFKTIFAEHLNEDCRRRFYKN 122

Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLM 167
           W   KKKAFTKY KK+  + GKK+I+   +KMKKYC VIR              KKAH+M
Sbjct: 123 WYNCKKKAFTKYAKKWTDESGKKEIERDFQKMKKYCKVIRVIAHTQTKLMKKRQKKAHIM 182

Query: 168 EIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 227
           EIQVNGG++AQKVD+A    E  +P+ +VF  DE IDIIGVTKGKG +GV +RW   +LP
Sbjct: 183 EIQVNGGTIAQKVDWAREKMESSVPVGSVFAMDENIDIIGVTKGKGVKGVTSRWHTKKLP 242

Query: 228 RKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------SH 281
           RKTH+GLRKVACIGAWHP+RV FTVARAGQ GYHHRTE+N+KIY++G+ +         +
Sbjct: 243 RKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEINEKIYRMGEGTHTKDGKLVKN 302

Query: 282 SAMTEFDRSVYLLSSLMGSF 301
           +A T+FD S   ++  MG F
Sbjct: 303 NASTDFDPSEKNITP-MGGF 321


>gi|342356437|gb|AEL28877.1| ribosomal protein L3 [Heliconius melpomene cythera]
          Length = 412

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 200/321 (62%), Positives = 249/321 (77%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+GF P+KR+ RHRGKVKAFPKDD SKP  LTAF+GYKAGMTH+VR+ 
Sbjct: 1   MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDSSKPVHLTAFIGYKAGMTHVVREP 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVT+IETPP+V VGVVGY++TP GLR+L TVWA+H++E+ RRRFYK
Sbjct: 61  DRPGSKINKKEIVEAVTVIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW K KKKAFTK +KK++ + G+K I+   +KM +YC+V+R              KKAH+
Sbjct: 121 NWYKCKKKAFTKSSKKWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG++  KV +A    EK IP+D+VF +DEMID IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQVNGGNIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G+           
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGKVIK 300

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           ++A TE+D S   ++  MG F
Sbjct: 301 NNASTEYDLSEKSITP-MGGF 320


>gi|268306352|gb|ACY95297.1| ribosomal protein L3 [Manduca sexta]
          Length = 414

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 201/321 (62%), Positives = 249/321 (77%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+GF P+KR+ RHRGKVKAFP+DD SKP  LTAF+GYKAGMTH+VR+ 
Sbjct: 1   MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPRDDASKPVHLTAFIGYKAGMTHVVREP 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTIIETPP+V VGVVGY++TP GLR+L TVWA+H++E+ RRRFYK
Sbjct: 61  DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW K KKKAFTK +KK++ + G+K I+   +KM +YC+V+R              KKAH+
Sbjct: 121 NWYKCKKKAFTKASKKWQDELGRKSIEKDFKKMIRYCSVVRIIAHTQMKLLKQRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG++  KV +A    EK IPID+VF +DEMID IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQVNGGTIEDKVKWAREHLEKPIPIDSVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G+           
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGKVIK 300

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           ++A TE+D S   ++  MG F
Sbjct: 301 NNASTEYDLSEKSITP-MGGF 320


>gi|330805639|ref|XP_003290787.1| 60S ribosomal protein L3 [Dictyostelium purpureum]
 gi|325079065|gb|EGC32684.1| 60S ribosomal protein L3 [Dictyostelium purpureum]
          Length = 399

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 199/321 (61%), Positives = 251/321 (78%), Gaps = 20/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHG+LGF PRKRASRH+GKVK+FPKDD ++   LTAF+GYKAGMTHIVRD+
Sbjct: 1   MSHRKFEAPRHGNLGFRPRKRASRHQGKVKSFPKDDRTQKVHLTAFMGYKAGMTHIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSK+HKKE  EAVTI+E PP+ +VG+VGY++T +GL++  TVWAQHL++  RRR YK
Sbjct: 61  EKPGSKMHKKEVVEAVTILECPPMYIVGLVGYIETAQGLKTYKTVWAQHLSDNFRRRLYK 120

Query: 121 NWCKSK-KKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAH 165
           NW KSK KKAFTKY K+YET++GKK I+A L+ +KK C+V+R              KKAH
Sbjct: 121 NWYKSKSKKAFTKYVKQYETEEGKKAIEASLQAIKKRCSVVRVIAHTQINKLRLTQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           ++EIQVNGGS+ +KV+FA   FEK + +  VF ++EMID+IGVTKGKG+ GV+ RWGV +
Sbjct: 181 VLEIQVNGGSIVEKVNFAVANFEKTVSVSGVFSENEMIDVIGVTKGKGFNGVIKRWGVRK 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAS----QESH 281
           LPRKTH+GLRKVACIGAWHP+RVS TV RAGQ GYHHR E NKKIY++G+A     ++  
Sbjct: 241 LPRKTHKGLRKVACIGAWHPSRVSTTVPRAGQLGYHHRVERNKKIYRIGQAQPVEGKQIS 300

Query: 282 SAMTEFDRSVYLLSSLMGSFS 302
           +  TEFD +   ++  MG F+
Sbjct: 301 TGKTEFDLTEKTINP-MGGFT 320


>gi|321477553|gb|EFX88511.1| hypothetical protein DAPPUDRAFT_206128 [Daphnia pulex]
          Length = 412

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 201/321 (62%), Positives = 247/321 (76%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+GF P+KR   HRG+VK+FP DDP KP  LTAFL YKAGMTHIVR+ 
Sbjct: 1   MSHRKFSAPRHGSMGFYPKKRCRSHRGRVKSFPHDDPKKPIHLTAFLAYKAGMTHIVREC 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           +KPGSK++KKE  EAVTI+ETPP+V+VG+VGYV TP+GLR+L TVWA+H+ E+ RRRFYK
Sbjct: 61  DKPGSKVNKKEVVEAVTILETPPMVIVGIVGYVATPKGLRALKTVWAEHIGEDCRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTK +KK++ D GKK I+ +L  MK+YC VIR              KKAH+
Sbjct: 121 NWYKSKKKAFTKASKKWQDDLGKKVIEKELRAMKRYCKVIRVIAHTQMKLLRQRQKKAHM 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG++ QKVD+A    EK IPI ++F +DEMID+IGVTKGKG++GV +RW   +L
Sbjct: 181 MEIQVNGGTIRQKVDWARQHLEKTIPITSLFAQDEMIDVIGVTKGKGFKGVTSRWHTRKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHP+RV +TVARAGQ GYHHRTEMNKKIY++GK           
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVQYTVARAGQKGYHHRTEMNKKIYRIGKGIHTRKGKVIK 300

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           ++A TE+D +   ++  MG F
Sbjct: 301 NNAATEYDLTDKSITP-MGGF 320


>gi|410965571|ref|XP_003989320.1| PREDICTED: 60S ribosomal protein L3 [Felis catus]
          Length = 403

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 210/319 (65%), Positives = 256/319 (80%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VVVGVVGYV+TPRGLR+  T++A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGVVGYVETPRGLRTFKTIFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ DDGKK ++     MKKYC VIR              KKAHL
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQES 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   ++ L G
Sbjct: 301 NNASTDYDLSDKSINPLGG 319


>gi|340368475|ref|XP_003382777.1| PREDICTED: 60S ribosomal protein L3-like [Amphimedon queenslandica]
          Length = 402

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 191/298 (64%), Positives = 239/298 (80%), Gaps = 15/298 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR  RHRGKVK+FPKDDPSKPC LTA++GYKAGMTH VR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRCKRHRGKVKSFPKDDPSKPCHLTAYMGYKAGMTHTVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
            +PGSK HK E  EAVTIIETPP+V VGVVGY++TPRGLR L T++AQH+ E+ +RRFYK
Sbjct: 61  NRPGSKSHKNEVVEAVTIIETPPMVCVGVVGYIETPRGLRQLKTIFAQHITEDCKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           NW +SKK A+TK  K++  + GK+ I+   EKMKKYC +IR               KK+H
Sbjct: 121 NWYRSKKTAYTKAAKRWADEAGKEAIKQDFEKMKKYCKIIRVLCHTQLSKIKSLKQKKSH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LMEIQVNGG++A KV++A    EK+IP+  VF+++E++D+IGVTKGKG++GV +RW   +
Sbjct: 181 LMEIQVNGGTIADKVEWAKEHLEKEIPVSDVFEQNEVLDVIGVTKGKGFKGVTSRWHTKK 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSA 283
           LPRKTH+GLRKVACIGAWHP+RV ++VARAGQ GYHHRTEMNKKIY++G A++E++  
Sbjct: 241 LPRKTHKGLRKVACIGAWHPSRVQYSVARAGQKGYHHRTEMNKKIYRIGSATEENNGG 298


>gi|115725235|ref|XP_791350.2| PREDICTED: 60S ribosomal protein L3-like [Strongylocentrotus
           purpuratus]
          Length = 404

 Score =  413 bits (1062), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 193/290 (66%), Positives = 236/290 (81%), Gaps = 14/290 (4%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+ RHRGK KAFPKDD SKP  LT FLGYKAGMTHIVRDV
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSRRHRGKAKAFPKDDKSKPVHLTCFLGYKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAV+I+ETPP+++VG+VGY++TP GLR+L TVWA+HL++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVSILETPPMIIVGLVGYIETPSGLRALKTVWAEHLSDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW +SKKKAFTK +KK+  + GKK+I+  L  MKKYCTVIR              KKAH+
Sbjct: 121 NWYRSKKKAFTKSSKKWADEMGKKEIEKDLNIMKKYCTVIRVIAHTQMKLMNQRQKKAHV 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGGS+  K+++A    EK IP+  VF +DE+IDIIGVTKG G++GV +RWG  +L
Sbjct: 181 MEIQLNGGSIGDKIEWARERLEKNIPVSEVFGQDELIDIIGVTKGHGFKGVTSRWGTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA 276
           PRKTH+GLRKVACIGAWHPARV + VARAGQ GYHHRTE+NKK+Y++GK 
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVGYGVARAGQKGYHHRTEINKKVYRVGKG 290


>gi|402876884|ref|XP_003902181.1| PREDICTED: 60S ribosomal protein L3-like, partial [Papio anubis]
          Length = 279

 Score =  413 bits (1062), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 196/279 (70%), Positives = 234/279 (83%), Gaps = 14/279 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  TV+A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ +DGKK ++     MKKYC VIR              KKAHL
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE 265
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYH RTE
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHLRTE 279


>gi|408399768|gb|EKJ78861.1| hypothetical protein FPSE_01004 [Fusarium pseudograminearum CS3096]
          Length = 391

 Score =  413 bits (1062), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 194/313 (61%), Positives = 245/313 (78%), Gaps = 16/313 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSL +LPRKRA+RHRGKVK+FPKDD  KP  LTA +GYKAGMT IVRD+
Sbjct: 1   MSHRKFEAPRHGSLAYLPRKRAARHRGKVKSFPKDDHKKPVHLTAAMGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+K +KKE  EAVTI++TPP++VVG+VGY++TPRGLRSL TVWA+HL++E++RRFYK
Sbjct: 61  DRPGAKANKKEIVEAVTIVDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEIKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK+  ++G   I  +LE++KKYCTV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKKHSENNG-ASITRELERIKKYCTVVRVLAHTQIRKTPLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGS+A KV F    FEK + + ++F++DEMID++ VTKG G+ GV  RWG  +L
Sbjct: 180 MEIQVNGGSIADKVSFGQELFEKPVDVSSIFEQDEMIDVVAVTKGHGFNGVTARWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N KIY++GK   + ++A TE
Sbjct: 240 PRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKIYRIGKGDADDNAA-TE 298

Query: 287 FDRSVYLLSSLMG 299
            D +   ++ L G
Sbjct: 299 IDVTKKTITPLGG 311


>gi|255725262|ref|XP_002547560.1| 60S ribosomal protein L3 [Candida tropicalis MYA-3404]
 gi|240135451|gb|EER35005.1| 60S ribosomal protein L3 [Candida tropicalis MYA-3404]
          Length = 389

 Score =  413 bits (1062), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 208/315 (66%), Positives = 255/315 (80%), Gaps = 18/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSLGFLPRKRA++ RG+VK+FPKD  SKP  LTAFLGYKAGMT IVRD+
Sbjct: 1   MSHRKYEAPRHGSLGFLPRKRAAKQRGRVKSFPKDVKSKPVALTAFLGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  EA T+++TPP+VVVGVVGYV+TPRGLRSL TVWA+HL+EEVRRRFYK
Sbjct: 61  DRPGSKMHKREVVEAATVVDTPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY+ KY TD   K I+ +L ++KKY +V+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYSGKYATD--AKQIETELARIKKYASVVRVLAHTQIKKTPLSQKKAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQ+NGGSV+ KVD+A   FEK++ +D+VF++DEMID+I VTKG G+EGV  RWG  +L
Sbjct: 179 AEIQINGGSVSDKVDWAREHFEKEVSVDSVFEQDEMIDVIAVTKGHGFEGVTHRWGTKKL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPA V++TVARAGQNGYHHRT +N K+Y++GK S E++ A TE
Sbjct: 239 PRKTHRGLRKVACIGAWHPANVNWTVARAGQNGYHHRTSINHKVYRVGKGSDEANGA-TE 297

Query: 287 FDRSVYLLSSLMGSF 301
           FDR+   ++  MG F
Sbjct: 298 FDRTKKTINP-MGGF 311


>gi|387018308|gb|AFJ51272.1| 60S ribosomal protein L3-like [Crotalus adamanteus]
          Length = 403

 Score =  413 bits (1061), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 206/319 (64%), Positives = 258/319 (80%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKD+PS+P  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDNPSQPIHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++ GSK++KKE  EAVT++ETPP+V+VG+VGYV+TPRGLR+  TV+A+H+++E +RRFYK
Sbjct: 61  DRVGSKVNKKEVVEAVTVVETPPMVIVGIVGYVQTPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ ++GKK ++     MKKYC VIR              KK+HL
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEEGKKQLEKDFNSMKKYCQVIRVIAHTQMRMLPLRQKKSHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+VA+KV++A G  E+Q+P+  VF +DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQVNGGTVAEKVEWARGKLEQQVPVSTVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ------ES 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+  Q        
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYQIKDGKLIK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A TE+D+S   ++ L G
Sbjct: 301 NNASTEYDQSDKSINPLGG 319


>gi|241952212|ref|XP_002418828.1| 60S ribosomal protein L3 [Candida dubliniensis CD36]
 gi|223642167|emb|CAX44134.1| ribosomal protein, large subunit, putative [Candida dubliniensis
           CD36]
          Length = 389

 Score =  413 bits (1061), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 207/315 (65%), Positives = 255/315 (80%), Gaps = 18/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSLGFLPRKRA++ RG+VK+FPKD  SKP  LTAFLGYKAGMT IVRD+
Sbjct: 1   MSHRKYEAPRHGSLGFLPRKRAAKQRGRVKSFPKDVKSKPVALTAFLGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  EA T+++TPP+VVVGVVGYV+TPRGLRSL TVWA+HL+EEVRRRFYK
Sbjct: 61  DRPGSKMHKREVVEAATVVDTPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY+ KY TD   K ++ +L ++KKY +V+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYSGKYATD--AKQVETELARIKKYASVVRVLAHTQIKKTPLSQKKAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQ+NGGSV+ KVD+A   FEK++ +D+VF++DEMID+I VTKG G+EGV  RWG  +L
Sbjct: 179 AEIQINGGSVSDKVDWAKEHFEKEVSVDSVFEQDEMIDVIAVTKGHGFEGVTHRWGTKKL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPA V++TVARAGQNGYHHRT +N K+Y++GK S E++ A TE
Sbjct: 239 PRKTHRGLRKVACIGAWHPANVNWTVARAGQNGYHHRTSINHKVYRVGKGSDEANGA-TE 297

Query: 287 FDRSVYLLSSLMGSF 301
           FDR+   ++  MG F
Sbjct: 298 FDRTKKTINP-MGGF 311


>gi|148223643|ref|NP_001088030.1| ribosomal protein L3-like [Xenopus laevis]
 gi|52221158|gb|AAH82692.1| LOC494722 protein [Xenopus laevis]
          Length = 407

 Score =  412 bits (1060), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 198/319 (62%), Positives = 249/319 (78%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHG LGFLP KR+ RHRGKVK +PKDDPSKP  LTAFLGYKAGMTH +R++
Sbjct: 1   MSHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPKDDPSKPVHLTAFLGYKAGMTHTLREI 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
            +PG K+ K+E  EAVTIIETPPLVVVG+VGYV+TPRGLRSL T++A+H+++E +RRFY+
Sbjct: 61  HRPGLKISKREEVEAVTIIETPPLVVVGIVGYVETPRGLRSLKTIFAEHISDECKRRFYR 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKK+FTKY KK++ ++GKK ++     MKKYC VIR              KKAH+
Sbjct: 121 NWYKSKKKSFTKYCKKWQDEEGKKQLEKDFSAMKKYCKVIRVIIHTQMKLLPLRQKKAHV 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG+VA+KVD+A+   EKQ+PI+ VF +DEMID+IGVTKGKG  GV +RW   +L
Sbjct: 181 MEIQLNGGTVAEKVDWAHEKLEKQVPINTVFCQDEMIDVIGVTKGKGVRGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------ 280
           PRKTH+GLRKVACIGAWHPARV++T+ARAGQ GYHHRTE+NKKIY++GK           
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVAYTIARAGQKGYHHRTEINKKIYRIGKGIHLEDGKVVK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D +   ++ L G
Sbjct: 301 NNAATQYDITDKSITPLGG 319


>gi|66802278|ref|XP_629921.1| 60S ribosomal protein L3 [Dictyostelium discoideum AX4]
 gi|464637|sp|P34113.2|RL3_DICDI RecName: Full=60S ribosomal protein L3
 gi|167816|gb|AAA99508.1| ribosomal protein [Dictyostelium discoideum]
 gi|60463269|gb|EAL61461.1| 60S ribosomal protein L3 [Dictyostelium discoideum AX4]
          Length = 398

 Score =  412 bits (1060), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 199/321 (61%), Positives = 250/321 (77%), Gaps = 20/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHG+LGF PRKRA+RH+GKVK+FPKDD ++   LTAF+GYKAGMTH+VRD+
Sbjct: 1   MSHRKFEAPRHGNLGFRPRKRAARHQGKVKSFPKDDRTQKVHLTAFMGYKAGMTHVVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSK+HKKE  EAVTIIE PP+ +VG+VGYV+T +GL++  TVWAQHL++  RRR YK
Sbjct: 61  EKPGSKMHKKEIVEAVTIIECPPMYIVGLVGYVETAQGLKTYKTVWAQHLSDNFRRRLYK 120

Query: 121 NWCKSK-KKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAH 165
           NW KSK KKAFTKY K+YET++GKK I+A L+ +KK C+V+R              KKAH
Sbjct: 121 NWYKSKSKKAFTKYVKQYETEEGKKSIEASLQAIKKRCSVVRVIAHTQVHKLKLTQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           ++EIQVNGGS+ +KV+FA   FEK + +  VF ++E+ID+IGVTKGKG+ GV+ RWGV +
Sbjct: 181 VLEIQVNGGSIVEKVNFAVANFEKTVNVTGVFAENELIDVIGVTKGKGFNGVIKRWGVRK 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES----H 281
           LPRKTH+GLRKVACIGAWHP+RVS TV RAGQ GYHHR E NKKIY++G+A  E      
Sbjct: 241 LPRKTHKGLRKVACIGAWHPSRVSTTVPRAGQLGYHHRVERNKKIYRIGQAQPEDGKQIS 300

Query: 282 SAMTEFDRSVYLLSSLMGSFS 302
           +  TEFD +   ++  MG F+
Sbjct: 301 TGKTEFDLTEKTINP-MGGFA 320


>gi|448523008|ref|XP_003868833.1| Rpl3 ribosomal protein, large subunit [Candida orthopsilosis Co
           90-125]
 gi|380353173|emb|CCG25929.1| Rpl3 ribosomal protein, large subunit [Candida orthopsilosis]
          Length = 389

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 205/315 (65%), Positives = 255/315 (80%), Gaps = 18/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSLGFLPRKRA++ RG+VK+FPKD  SKP  LTAFLGYKAGMT IVRD+
Sbjct: 1   MSHRKYEAPRHGSLGFLPRKRAAKQRGRVKSFPKDVKSKPVALTAFLGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  EA T+++TPPLVVVGVVGYV+TPRGLRSL TVWA+HL+EE+RRRFYK
Sbjct: 61  DRPGSKMHKREVVEAATVVDTPPLVVVGVVGYVETPRGLRSLTTVWAEHLSEEIRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY+ KY +D   K I+ +L ++KKY +V+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYSAKYASD--AKQIETELARIKKYASVVRVLAHTQVKKTPLASKKAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQ+NGGS++ KVD+A   FEK++ +D+VF++DEMID++ VTKG G+EGV  RWG  +L
Sbjct: 179 AEIQINGGSISDKVDWAKEHFEKEVSVDSVFEQDEMIDVVAVTKGHGFEGVTHRWGTKKL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPA V++TVARAGQNGYHHRT +N K+Y++GK S E++ A TE
Sbjct: 239 PRKTHRGLRKVACIGAWHPANVNWTVARAGQNGYHHRTSINHKVYRVGKGSDEANGA-TE 297

Query: 287 FDRSVYLLSSLMGSF 301
           FDR+   ++  MG F
Sbjct: 298 FDRTKKTINP-MGGF 311


>gi|354548076|emb|CCE44812.1| hypothetical protein CPAR2_406150 [Candida parapsilosis]
          Length = 389

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 205/315 (65%), Positives = 255/315 (80%), Gaps = 18/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSLGFLPRKRA++ RG+VK+FPKD  SKP  LTAFLGYKAGMT IVRD+
Sbjct: 1   MSHRKYEAPRHGSLGFLPRKRAAKQRGRVKSFPKDVKSKPVALTAFLGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  EA T+++TPPLVVVGVVGYV+TPRGLRSL TVWA+HL+EE+RRRFYK
Sbjct: 61  DRPGSKMHKREVVEAATVVDTPPLVVVGVVGYVETPRGLRSLTTVWAEHLSEEIRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY+ KY +D   K I+ +L ++KKY +V+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYSAKYASD--AKQIETELARIKKYASVVRVLAHTQVKKTPLASKKAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQ+NGGS++ KVD+A   FEK++ +D+VF++DEMID++ VTKG G+EGV  RWG  +L
Sbjct: 179 AEIQINGGSISDKVDWAKEHFEKEVSVDSVFEQDEMIDVVAVTKGHGFEGVTHRWGTKKL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPA V++TVARAGQNGYHHRT +N K+Y++GK S ES+ + TE
Sbjct: 239 PRKTHRGLRKVACIGAWHPANVNWTVARAGQNGYHHRTSINHKVYRVGKGSDESNGS-TE 297

Query: 287 FDRSVYLLSSLMGSF 301
           FDR+   ++  MG F
Sbjct: 298 FDRTKKTINP-MGGF 311


>gi|148228673|ref|NP_001080341.1| ribosomal protein L3 [Xenopus laevis]
 gi|27769202|gb|AAH42242.1| Rpl3-prov protein [Xenopus laevis]
          Length = 403

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 207/319 (64%), Positives = 254/319 (79%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR  RHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRCKRHRGKVKSFPKDDPSKPIHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVT++ETPP+V+VG+VGYV+TPRGLRSL T++A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTVVETPPMVIVGIVGYVQTPRGLRSLKTIFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ +DGKK ++     MKKYC VIR              KK+HL
Sbjct: 121 NWYKSKKKAFTKYCKKWQDEDGKKQLEKDFASMKKYCQVIRVIAHTQMRLLPLRQKKSHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG++A+KVD+A    E+Q+ I  VF +DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQVNGGTIAEKVDWAREKLEQQVVIGGVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYHSKDGKLVK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   ++ L G
Sbjct: 301 NNASTDYDLSDKSINPLGG 319


>gi|84095076|dbj|BAE66653.1| ribosomal protein L3 [Papilio xuthus]
          Length = 412

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 199/321 (61%), Positives = 248/321 (77%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+GF P+KR+ R RGKVKAFPKDDP+KP  LTAF+GYKAGMTH+VR+ 
Sbjct: 1   MSHRKFSAPRHGSMGFYPKKRSRRSRGKVKAFPKDDPNKPVHLTAFIGYKAGMTHVVREP 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTIIETPP+V VG VGY++TP GLR+L TVWA+H++E+ RRRFYK
Sbjct: 61  DRPGSKINKKEIVEAVTIIETPPMVCVGAVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW K KKKAFTK +KK++ + G+K I+   +KM +YC+VIR              KKAH+
Sbjct: 121 NWYKCKKKAFTKASKKWQDELGQKSIEKDFKKMIRYCSVIRVIAHTQMKLLKQRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG++  KV +A    EK IP+D+VF +DEMID IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G+           
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGKVIK 300

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           ++A TE+D S   ++  MG F
Sbjct: 301 NNASTEYDLSEKSITP-MGGF 320


>gi|109100340|ref|XP_001106805.1| PREDICTED: 60S ribosomal protein L3-like isoform 2 [Macaca mulatta]
          Length = 403

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 202/319 (63%), Positives = 247/319 (77%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR SRH GKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRRSRHHGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+E PP+VVVG+ GYV+TPRGLR+  TV+A+H+ +E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVEMPPMVVVGIAGYVETPRGLRTFKTVFAEHMGDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ +DGKK ++      KKY  VIR              KKAHL
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSTKKYGQVIRVIAHTQMRLLPLRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQVNGG+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV + W   +L
Sbjct: 181 TEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSHWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQES 280
           PRKTHRGLRKVACIGA HPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           
Sbjct: 241 PRKTHRGLRKVACIGARHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   ++ L G
Sbjct: 301 NNASTDYDLSDKSINPLGG 319


>gi|233957366|gb|ACQ91223.1| ribosomal protein L3 [Penaeus monodon]
          Length = 406

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 203/321 (63%), Positives = 245/321 (76%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+ F P+KR  RHR +VK FPKDD SKP  LTAFLGYKAGMTHIVR  
Sbjct: 1   MSHRKFSAPRHGSMAFYPKKRCRRHRPRVKTFPKDDKSKPVHLTAFLGYKAGMTHIVRVA 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           +KPGSK+++KE  EAVTIIETPP+V VGVVGY++TPRGLR L T+WA+HL+EE +RRFYK
Sbjct: 61  DKPGSKINRKEVLEAVTIIETPPMVCVGVVGYIQTPRGLRVLKTIWAEHLSEECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFT   +K++   GKK I+ ++ KMKKYCT IR              KKAH+
Sbjct: 121 NWHKSKKKAFTNAAQKWQDSLGKKMIKREIAKMKKYCTHIRIIAHTQVRILRKKFKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG+V++KVD+A   FEKQIPID+VF +DEMID+IGVTKGKG +GV +RWG  +L
Sbjct: 181 MEIQLNGGTVSEKVDWAVNHFEKQIPIDSVFAQDEMIDVIGVTKGKGMKGVTSRWGTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHP RV FTVARAGQ GYHHRTE  KKIY++GK           
Sbjct: 241 PRKTHKGLRKVACIGAWHPTRVQFTVARAGQKGYHHRTERTKKIYRIGKGIHTKEGKVIK 300

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           ++A T++D +   ++  MG F
Sbjct: 301 NNASTDYDLTEKTITP-MGGF 320


>gi|68491020|ref|XP_710682.1| likely cytosolic ribosomal protein L3 [Candida albicans SC5314]
 gi|68491039|ref|XP_710673.1| likely cytosolic ribosomal protein L3 [Candida albicans SC5314]
 gi|46431906|gb|EAK91425.1| likely cytosolic ribosomal protein L3 [Candida albicans SC5314]
 gi|46431916|gb|EAK91434.1| likely cytosolic ribosomal protein L3 [Candida albicans SC5314]
 gi|238883805|gb|EEQ47443.1| 60S ribosomal protein L3 [Candida albicans WO-1]
          Length = 389

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 206/315 (65%), Positives = 255/315 (80%), Gaps = 18/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSLGFLPRKRA++ RG+VK+FPKD  SKP  LTAFLGYKAGMT IVRD+
Sbjct: 1   MSHRKYEAPRHGSLGFLPRKRAAKQRGRVKSFPKDVKSKPVALTAFLGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  EA T+++TPP+VVVGVVGYV+TPRGLRSL TVWA+HL+EEVRRRFYK
Sbjct: 61  DRPGSKMHKREVVEAATVVDTPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY+ KY TD   K ++ +L ++KKY +V+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYSGKYATD--AKQVETELARIKKYASVVRVLAHTQIKKTPLSQKKAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQ+NGGSV+ KVD+A   FEK++ +D+VF++DEMID+I VTKG G+EGV  RWG  +L
Sbjct: 179 AEIQINGGSVSDKVDWAKEHFEKEVSVDSVFEQDEMIDVIAVTKGHGFEGVTHRWGTKKL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPA V++TVARAGQNGYHHRT +N K+Y++GK + E++ A TE
Sbjct: 239 PRKTHRGLRKVACIGAWHPANVNWTVARAGQNGYHHRTSINHKVYRVGKGTDEANGA-TE 297

Query: 287 FDRSVYLLSSLMGSF 301
           FDR+   ++  MG F
Sbjct: 298 FDRTKKTINP-MGGF 311


>gi|326509435|dbj|BAJ91634.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 388

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 205/315 (65%), Positives = 254/315 (80%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PR GSLGFLPRKRA+RHRGKVK+FPKDDPSKP  LTA +GYKAGM+H+VRD+
Sbjct: 1   MSHRKFEEPRSGSLGFLPRKRAARHRGKVKSFPKDDPSKPVHLTALMGYKAGMSHVVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  EAVT+IETPP+VVVGVVGYV+TPRGLRSL TVWA+HL++E++RRFYK
Sbjct: 61  DRPGSKMHKREVVEAVTVIETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSDELKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW +SKKKAFTKY KK+  ++G   I  ++E+++KYCTV+R              KKAHL
Sbjct: 121 NWYRSKKKAFTKYAKKHSENNG-SSIAREIERIRKYCTVVRVLAHTQIRKTGLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGSVA K++FA   FEK + + ++F+++++ID+IGVT G G EGV  RWGVTRL
Sbjct: 180 MEIQVNGGSVADKLEFAKSHFEKTVDVRSIFEQNQVIDVIGVTSGHGTEGVTHRWGVTRL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHP+ V ++V RAGQNGYHHRTE NKKIY++G  S +  S  TE
Sbjct: 240 PRKTHRGLRKVACIGAWHPSNVMYSVPRAGQNGYHHRTEKNKKIYRIGTGS-DVKSGSTE 298

Query: 287 FDRSVYLLSSLMGSF 301
           +D S   ++  MG F
Sbjct: 299 YDISDKTITP-MGGF 312


>gi|187607061|ref|NP_001120075.1| ribosomal protein L3 [Xenopus (Silurana) tropicalis]
 gi|165970448|gb|AAI58280.1| LOC100145083 protein [Xenopus (Silurana) tropicalis]
 gi|165971389|gb|AAI58514.1| LOC100145083 protein [Xenopus (Silurana) tropicalis]
          Length = 403

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 207/319 (64%), Positives = 254/319 (79%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+ RHRGKVK+FPKDD SKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSKRHRGKVKSFPKDDQSKPIHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVT++ETPP+V+VG+VGYV+TPRGLRSL T++A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTVVETPPMVIVGIVGYVQTPRGLRSLKTIFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ D+GKK ++     MKKYC VIR              KK+HL
Sbjct: 121 NWYKSKKKAFTKYCKKWQDDEGKKQLEKDFASMKKYCQVIRVIAHTQMRLLPLRQKKSHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+VA+KVD+A    E+Q+ I  VF +DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQVNGGTVAEKVDWAREKLEQQVAITGVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYHSKDGKLVK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   ++ L G
Sbjct: 301 NNASTDYDLSDKSINPLGG 319


>gi|67540064|ref|XP_663806.1| RL3_NEUCR 60S ribosomal protein L3 [Aspergillus nidulans FGSC A4]
 gi|40738798|gb|EAA57988.1| RL3_NEUCR 60S ribosomal protein L3 [Aspergillus nidulans FGSC A4]
          Length = 447

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 195/302 (64%), Positives = 240/302 (79%), Gaps = 16/302 (5%)

Query: 12  GSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKE 71
           GSL +LPRKRA+RHRG+VK+FPKDDP KP  LTA +GYKAGMT +VRD+++PG+K+HKKE
Sbjct: 67  GSLAYLPRKRAARHRGRVKSFPKDDPKKPVHLTASMGYKAGMTTVVRDLDRPGAKMHKKE 126

Query: 72  TCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFT 131
             EA T+IETPPL+ VGVVGY++TPRGLRSL TVWA+HL++EV+RRFYKNW KSKKKAFT
Sbjct: 127 IVEAATVIETPPLIAVGVVGYIETPRGLRSLATVWAEHLSDEVKRRFYKNWYKSKKKAFT 186

Query: 132 KYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLMEIQVNGGSVA 177
           KY KK+  ++G   I   LE++KKYCTV+R              KKAHLMEIQVNGGSVA
Sbjct: 187 KYAKKHSEENG-ASITRDLERIKKYCTVVRVLAHTQIRKTPLKQKKAHLMEIQVNGGSVA 245

Query: 178 QKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKV 237
           +KVDFA   FEK I ID +F+KDEMID+I VTKG G++GV +RWG  +LPRKTH+GLRKV
Sbjct: 246 EKVDFARNLFEKPIEIDTIFEKDEMIDVIAVTKGHGFQGVTSRWGTKKLPRKTHKGLRKV 305

Query: 238 ACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRSVYLLSSL 297
           ACIGAWHP+ V +TVARAGQ GYHHRT  N K++++GK S E++ A T+FD S   ++ L
Sbjct: 306 ACIGAWHPSHVQWTVARAGQMGYHHRTSCNHKVFRIGKGSDEAN-ASTDFDVSKKQITPL 364

Query: 298 MG 299
            G
Sbjct: 365 GG 366


>gi|19115692|ref|NP_594780.1| 60S ribosomal protein L3 [Schizosaccharomyces pombe 972h-]
 gi|548771|sp|P36584.2|RL3B_SCHPO RecName: Full=60S ribosomal protein L3-B
 gi|5059|emb|CAA40901.1| ribosomal protein L3 [Schizosaccharomyces pombe]
 gi|13810236|emb|CAC37425.1| 60S ribosomal protein L3 [Schizosaccharomyces pombe]
          Length = 388

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 212/315 (67%), Positives = 250/315 (79%), Gaps = 18/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSH KFE PRHGSLGFLPRKRASR RGKVKAFPKDD SKP  LTAFLGYKAGMTHIVRD+
Sbjct: 1   MSHCKFEQPRHGSLGFLPRKRASRQRGKVKAFPKDDASKPVHLTAFLGYKAGMTHIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  EAVTIIETPP+VVVGVVGYV+TPRGLRSL TVWA+HL+EEV+RRFYK
Sbjct: 61  DRPGSKMHKREILEAVTIIETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KKY   +  + I  +LE++KKYC+V+R              KKAHL
Sbjct: 121 NWFKSKKKAFTKYAKKYA--ESTQSINRELERIKKYCSVVRVLAHTQIRKTPLAQKKAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGSVA KV++A   FEK + I + F+++EMID+IGVT+GKG EG   RWG  RL
Sbjct: 179 MEIQVNGGSVADKVEWAREHFEKTVDIKSTFEQNEMIDVIGVTRGKGNEGTTARWGTKRL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPA V +TVARAG  GY HRT++N KIY++G A  ++ +A T+
Sbjct: 239 PRKTHRGLRKVACIGAWHPANVQWTVARAGNAGYMHRTQLNSKIYRIG-AGDDAKNASTD 297

Query: 287 FDRSVYLLSSLMGSF 301
           FD +   ++  MG F
Sbjct: 298 FDATEKRITP-MGGF 311


>gi|347964|gb|AAA91344.1| TARBP-b, partial [Homo sapiens]
          Length = 277

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 194/277 (70%), Positives = 231/277 (83%), Gaps = 14/277 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR SRHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRTSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  TV+A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ +DGKK ++     MKKYC VIR              KKAHL
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHR 263
           PRKTHRGLRKVACIGAWHP RV+F+VARAGQ GYHHR
Sbjct: 241 PRKTHRGLRKVACIGAWHPVRVAFSVARAGQKGYHHR 277


>gi|296812079|ref|XP_002846377.1| 60S ribosomal protein L3 [Arthroderma otae CBS 113480]
 gi|238841633|gb|EEQ31295.1| 60S ribosomal protein L3 [Arthroderma otae CBS 113480]
          Length = 458

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 198/316 (62%), Positives = 245/316 (77%), Gaps = 22/316 (6%)

Query: 3   HRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEK 62
           HRK+E PRHGSL +LPRKRA+RHRGKVK+FPKDDP KP  LTA +GYKAGMT IVRD+E+
Sbjct: 68  HRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTATMGYKAGMTTIVRDLER 127

Query: 63  PGSKLHKKETCEAVTIIETPP---LVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFY 119
           PG+K+H+KE  EAVTI+ETPP   ++ VG+VGY++TPRGLRSL TVWA HL++EV+RRFY
Sbjct: 128 PGAKMHRKEVVEAVTIVETPPREQMIAVGIVGYIETPRGLRSLTTVWADHLSDEVKRRFY 187

Query: 120 KNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAH 165
           KNW KSKKKAFT+Y K   T         +LE++K YCTV+R              KKAH
Sbjct: 188 KNWYKSKKKAFTRYAK---THADAAATTRELERIKNYCTVVRLLAHTQIRKTPLKQKKAH 244

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           LME+QVNGGS+A+KV+FA+G FEK I +D VF+KDE++D+I VTKG G+ GV +RWG  +
Sbjct: 245 LMEVQVNGGSIAEKVEFAHGLFEKPIDVDTVFEKDEVVDVIAVTKGHGFSGVTSRWGTKK 304

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ+GYHHRT  N KIY++GKA  E  +A T
Sbjct: 305 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQDGYHHRTSANHKIYRIGKAGDEG-NAST 363

Query: 286 EFDRSVYLLSSLMGSF 301
           +FD S   ++  MG F
Sbjct: 364 DFDVSKKQITP-MGGF 378


>gi|71896067|ref|NP_001025612.1| ribosomal protein L3-like [Xenopus (Silurana) tropicalis]
 gi|60688143|gb|AAH91070.1| MGC108366 protein [Xenopus (Silurana) tropicalis]
          Length = 407

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 197/319 (61%), Positives = 249/319 (78%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHG LGFLP KR+ RHRGKVK +PKDDPSKP  LTAFLGYKAGMTH +R+V
Sbjct: 1   MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPKDDPSKPVHLTAFLGYKAGMTHTLREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
            + G K+ K+E  EAVTIIETPPLVVVG+VGYV+TPRGLRSL T++A+H+++E +RRFY+
Sbjct: 61  HRTGLKISKREEVEAVTIIETPPLVVVGIVGYVETPRGLRSLKTIFAEHISDECKRRFYR 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKK+FTKY+KK++ ++GKK ++     MKKYC VIR              KKAH+
Sbjct: 121 NWYKSKKKSFTKYSKKWQDEEGKKQLEKDFSAMKKYCKVIRVIVHTQMKLLPLRQKKAHV 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG+VA KVD+A+   EKQ+P+++VF +DEMID+IGVTKGKG  GV +RW   +L
Sbjct: 181 MEIQLNGGTVADKVDWAHEKLEKQVPVNSVFGQDEMIDVIGVTKGKGVRGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------ 280
           PRKTH+GLRKVACIGAWHPARV++T+ARAGQ GYHHRTE+NKKIY++GK           
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVAYTIARAGQKGYHHRTEINKKIYRIGKGVHMEDGKVVK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D +   ++ L G
Sbjct: 301 NNAATQYDITDKSITPLGG 319


>gi|389611151|dbj|BAM19187.1| ribosomal protein L3 [Papilio polytes]
          Length = 412

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 200/321 (62%), Positives = 248/321 (77%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+GF P+KR+ R RGKVKAFPKDD +KP  LTAF+GYKAGMTH+VR+ 
Sbjct: 1   MSHRKFSAPRHGSMGFYPKKRSRRSRGKVKAFPKDDQNKPVHLTAFIGYKAGMTHVVREP 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTIIETPP+V VGVVGY++TP GLR+L TVWA+H++E+ RRRFYK
Sbjct: 61  DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW K KKKAFTK +KK++ + G+K I+   +KM +YC+VIR              KKAH+
Sbjct: 121 NWYKCKKKAFTKASKKWQDELGQKSIEKDFKKMIRYCSVIRVIAHTQMKLLKQRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG++  KV +A    EK IP+D+VF +DEMID IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQVNGGTIEDKVKWAREHLEKPIPVDSVFTQDEMIDCIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G+           
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGKVIK 300

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           ++A TE+D S   ++  MG F
Sbjct: 301 NNASTEYDLSEKSITP-MGGF 320


>gi|115383888|ref|XP_001208491.1| 60S ribosomal protein L3 [Aspergillus terreus NIH2624]
 gi|114196183|gb|EAU37883.1| 60S ribosomal protein L3 [Aspergillus terreus NIH2624]
          Length = 395

 Score =  410 bits (1054), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 199/304 (65%), Positives = 241/304 (79%), Gaps = 17/304 (5%)

Query: 12  GSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKE 71
           GSL +LPRKRA+RHRGKVK+FPKDDP KP  LTA +GYKAGMT +VRD+++PG+K+HKKE
Sbjct: 15  GSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTASMGYKAGMTTVVRDLDRPGAKMHKKE 74

Query: 72  TCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFT 131
             EAVTI+ETPPLV VGVVGY++TPRGLRSL TVWA+HL++EV+RRFYKNW KSKKKAFT
Sbjct: 75  IVEAVTIVETPPLVAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYKNWYKSKKKAFT 134

Query: 132 KYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLMEIQVNGGSVA 177
           KY KK+  ++G   I  +LE++KKYCTV+R              KKAHLMEIQVNGGSVA
Sbjct: 135 KYAKKHADENGSA-ITRELERIKKYCTVVRVLAHTQVRKTPLKQKKAHLMEIQVNGGSVA 193

Query: 178 QKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKV 237
            KVDFA   FEK I ID++F+KDEMID+I VTKG G++GV +RWG  +LPRKTH+GLRKV
Sbjct: 194 DKVDFARNLFEKPIEIDSIFEKDEMIDVIAVTKGHGFQGVTSRWGTKKLPRKTHKGLRKV 253

Query: 238 ACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRSVYLLSSL 297
           ACIGAWHP  V +TVARAGQ GYHHRT  N K++++GK S E  +A T+FD S   ++  
Sbjct: 254 ACIGAWHPNHVQWTVARAGQMGYHHRTSCNHKVFRIGKGSDEG-NASTDFDVSKKQITP- 311

Query: 298 MGSF 301
           MG F
Sbjct: 312 MGGF 315


>gi|19114383|ref|NP_593471.1| 60S ribosomal protein L3 [Schizosaccharomyces pombe 972h-]
 gi|730556|sp|P40372.2|RL3A_SCHPO RecName: Full=60S ribosomal protein L3-A
 gi|508856|gb|AAA19655.1| ribosomal protein L3 [Schizosaccharomyces pombe]
 gi|2370475|emb|CAB11503.1| 60S ribosomal protein L3 [Schizosaccharomyces pombe]
          Length = 388

 Score =  410 bits (1054), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 211/315 (66%), Positives = 250/315 (79%), Gaps = 18/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSH KFE PRHGSLGFLPRKRASR RGKVKAFPKDD SKP  LTAFLGYKAGMTHIVRD+
Sbjct: 1   MSHCKFEQPRHGSLGFLPRKRASRQRGKVKAFPKDDASKPVHLTAFLGYKAGMTHIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  EAVT+IETPP+VVVGVVGYV+TPRGLRSL TVWA+HL+EEV+RRFYK
Sbjct: 61  DRPGSKMHKREILEAVTVIETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KKY   +  + I  +LE++KKYC+V+R              KKAHL
Sbjct: 121 NWFKSKKKAFTKYAKKYA--ESTQSINRELERIKKYCSVVRVLAHTQIRKTPLAQKKAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGSVA KV++A   FEK + I + F+++EMID+IGVT+GKG EG   RWG  RL
Sbjct: 179 MEIQVNGGSVADKVEWAREHFEKTVDIKSTFEQNEMIDVIGVTRGKGNEGTTARWGTKRL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPA V +TVARAG  GY HRT++N KIY++G A  ++ +A T+
Sbjct: 239 PRKTHRGLRKVACIGAWHPANVQWTVARAGNAGYMHRTQLNSKIYRIG-AGDDAKNASTD 297

Query: 287 FDRSVYLLSSLMGSF 301
           FD +   ++  MG F
Sbjct: 298 FDATEKRITP-MGGF 311


>gi|225718854|gb|ACO15273.1| 60S ribosomal protein L3 [Caligus clemensi]
          Length = 410

 Score =  410 bits (1053), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 199/320 (62%), Positives = 245/320 (76%), Gaps = 19/320 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+GF P+K + RHRGK KAFPKDDPSKP  LT FLGYKAGMTHIVR+ 
Sbjct: 1   MSHRKFSAPRHGSMGFYPKKCSKRHRGKAKAFPKDDPSKPVHLTCFLGYKAGMTHIVREA 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPPLV +GVVGY++TPRGLR+L TVWA+H+ EE +RRFYK
Sbjct: 61  DRPGSKINKKEIVEAVTIVETPPLVPIGVVGYIETPRGLRALKTVWAEHIGEEAKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTK  KK+E D GKK+I   L+++ KY +V+R              KKAH+
Sbjct: 121 NWSKSKKKAFTKACKKWEDDLGKKEIDNDLKQISKYASVVRLICHTQQKLLKRRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGGS+  KV+FA   FEK+IP+ +VF KDEMID IGVTKGKG++GV +RW   +L
Sbjct: 181 MEIQLNGGSILDKVNFAREHFEKEIPVRSVFSKDEMIDTIGVTKGKGFKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP+R+ +TVARAGQ GYHHRTE+NKKIY + +     +  M +
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRIQYTVARAGQKGYHHRTEINKKIYDIRRGFHTENGKMVK 300

Query: 287 FDRSV-YLLS----SLMGSF 301
            + S  Y L+    + MG F
Sbjct: 301 NNASTDYDLADKSINPMGGF 320


>gi|309268181|ref|XP_001475783.2| PREDICTED: 60S ribosomal protein L3-like [Mus musculus]
          Length = 403

 Score =  409 bits (1052), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 201/319 (63%), Positives = 249/319 (78%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSH KF  PRHGSLGFLPRKR+SRH GKVK+FPKDD SKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHGKFSAPRHGSLGFLPRKRSSRHPGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGS+++KKE  EAVTI+E PP+VVVG+VGYV+ PRGLR+  TV+A+H++ E +RRFYK
Sbjct: 61  DRPGSEVNKKEVVEAVTIVENPPMVVVGIVGYVENPRGLRTFKTVFAEHISNECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ D GKK ++     MKKYC VIR              KKAH 
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMHLLPLCQKKAHF 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEI VNGG+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIPVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKL--GKASQES---- 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYH+RTE+NKKIYK+  G   ++     
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHYRTEINKKIYKICQGHLIKDGKLIK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   ++ L G
Sbjct: 301 NNASTDYDLSDKSINPLGG 319


>gi|426354155|ref|XP_004044533.1| PREDICTED: 60S ribosomal protein L3-like isoform 1 [Gorilla gorilla
           gorilla]
          Length = 403

 Score =  409 bits (1051), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 194/290 (66%), Positives = 235/290 (81%), Gaps = 14/290 (4%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDDP KP  LTAFLGYKAGMTHI+R+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPYKPVHLTAFLGYKAGMTHIMREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++P SK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  TV+A+H++ E +RRFYK
Sbjct: 61  DRPASKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISNECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ +D KK ++     MKKYC VIR              KKAHL
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDVKKQLEEDFSSMKKYCHVIRVIAHTQMRLLPLRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+VA+K+D+     E+Q+ ++ VF +DEMID+IGVTKG GY+GV +RW   +L
Sbjct: 181 MEIQVNGGTVAEKLDWVRERLEQQVNVNQVFGQDEMIDVIGVTKGNGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA 276
           P KTHRGLRKVACIGAWHPARV+F+VARAGQ G  HRTE+NKKIYK+G+ 
Sbjct: 241 PLKTHRGLRKVACIGAWHPARVAFSVARAGQKGNRHRTEINKKIYKIGQG 290


>gi|302697183|ref|XP_003038270.1| 60S ribosomal protein L3 [Schizophyllum commune H4-8]
 gi|300111967|gb|EFJ03368.1| hypothetical protein SCHCODRAFT_80517 [Schizophyllum commune H4-8]
          Length = 421

 Score =  409 bits (1051), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 205/311 (65%), Positives = 253/311 (81%), Gaps = 17/311 (5%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           ++E PRHGSLGFLPRKRA+RHRGKVK+FPKDDP KP  LTAF+GYKAGMTH+VRD+++PG
Sbjct: 38  EYEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAFMGYKAGMTHVVRDLDRPG 97

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
           SK+HK+E  EAVTI+ETPP++VVGVVGYV+TPRGLR+L TVWA HL++EVRRRFYKNW +
Sbjct: 98  SKMHKREVVEAVTIVETPPVMVVGVVGYVETPRGLRALTTVWASHLSDEVRRRFYKNWYR 157

Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLMEIQ 170
           SKKKAFT+Y KK   +DGK  I  +LE+++KYCTV+R              KKAHLMEIQ
Sbjct: 158 SKKKAFTRYAKKASENDGKL-ISRELERIRKYCTVVRVLAHTQIRKTGLSQKKAHLMEIQ 216

Query: 171 VNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 230
           VNGGSVA KV+FA+G FEK + I +VF++DE +DII VTKG G+EGV  RWG  +LPRKT
Sbjct: 217 VNGGSVADKVEFAHGLFEKPVEIGSVFEQDECVDIIAVTKGHGFEGVTHRWGTKKLPRKT 276

Query: 231 HRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRS 290
           H+GLRKVACIGAWHP++V ++VARAGQNGYHHRTE+NKKIY++G  S +  +A TE D +
Sbjct: 277 HKGLRKVACIGAWHPSKVMYSVARAGQNGYHHRTEINKKIYRVGLGSDDG-NASTEHDIT 335

Query: 291 VYLLSSLMGSF 301
              ++  MG F
Sbjct: 336 KKAITP-MGGF 345


>gi|403218316|emb|CCK72807.1| hypothetical protein KNAG_0L01880 [Kazachstania naganishii CBS
           8797]
          Length = 387

 Score =  409 bits (1051), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 196/315 (62%), Positives = 246/315 (78%), Gaps = 18/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHG LGFLPRKRA+  RG+VK+FPKDD SK   LT+FLGYKAGM+ IVRD+
Sbjct: 1   MSHRKFEAPRHGHLGFLPRKRAASIRGRVKSFPKDDKSKAVALTSFLGYKAGMSTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK HK+E  EAVT+++TP +VVVG+VGYV+TPRGLRSL TVWA+HL++E++R+FYK
Sbjct: 61  DRPGSKFHKREIVEAVTVVDTPAIVVVGLVGYVETPRGLRSLTTVWAEHLSDEIKRKFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY+ KY  D     I+ +L ++KKY TV+R              KKAH+
Sbjct: 121 NWYKSKKKAFTKYSTKYAQDG--TAIERELARIKKYATVVRVLVHTQIRKTPLSQKKAHM 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQ+NGGS++ KVD+A   FEK + +D+VF+ +EMID++ VTKG G+EGV  RWG TRL
Sbjct: 179 AEIQLNGGSISDKVDWAREHFEKTVSVDSVFENNEMIDVVAVTKGHGFEGVTHRWGTTRL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPA V ++VARAGQNGYHHRT +N KIY++GK   ES+ + T 
Sbjct: 239 PRKTHRGLRKVACIGAWHPAHVMWSVARAGQNGYHHRTSINHKIYRVGKGEDESNGS-TS 297

Query: 287 FDRSVYLLSSLMGSF 301
           FDR+   ++  MG F
Sbjct: 298 FDRTKKTINP-MGGF 311


>gi|311334502|emb|CBN08632.1| small nucleolar RNA, C/D box 43 [Microcosmus squamiger]
          Length = 404

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 195/321 (60%), Positives = 247/321 (76%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR   HRG+V++FP+DD +KPC LTAFL YKAGMTHIVRDV
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRCRHHRGRVRSFPRDDKTKPCHLTAFLAYKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP++VVGV+GY++TPRGLR+L T++A+HL++E +RRFYK
Sbjct: 61  DRPGSKMNKKEVVEAVTILETPPIIVVGVIGYIQTPRGLRTLNTIFAEHLSDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW  +KKKAF+K   K++ +DGK+ I     KMKKYCTVIR              KKAHL
Sbjct: 121 NWYSAKKKAFSKACHKWQDEDGKQQIDQDFAKMKKYCTVIRVIAHSQMKLLPVRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGGS+A KV++A    EK + +  +F +DEMIDIIGVTKG GY+GV +RW   +L
Sbjct: 181 MEIQINGGSIADKVEYARNLLEKPVKVADLFGQDEMIDIIGVTKGHGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------ 280
           PRKTH+GLRKVACIGAWHPARV+F+VAR+GQ GYHHRTE+NKKIY++G    +       
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVAFSVARSGQKGYHHRTEINKKIYRVGVGIHKEGNKIIK 300

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           ++A TE D +   ++  MG F
Sbjct: 301 NNASTEVDITDKSITP-MGGF 320


>gi|405959119|gb|EKC25184.1| 60S ribosomal protein L3, partial [Crassostrea gigas]
          Length = 484

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 189/289 (65%), Positives = 237/289 (82%), Gaps = 14/289 (4%)

Query: 2   SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
           SHRKF  PRHGS  FLP+KR+ RHRGK K+FPKDD SKPC LTAFLGYKAGMTHIVR+V+
Sbjct: 85  SHRKFSAPRHGSKAFLPKKRSRRHRGKCKSFPKDDKSKPCHLTAFLGYKAGMTHIVREVD 144

Query: 62  KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
           +PGSK +KKE  EAVTI+ETPP+++VGVVGY++TP+GLR+  T++A+HL+E+ RRRFYKN
Sbjct: 145 RPGSKSNKKEIVEAVTILETPPMMIVGVVGYIETPKGLRAFKTIFAEHLSEDCRRRFYKN 204

Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLM 167
           W ++KKKA+TKY+KK++ +DGKK+I+    KMKKYC VIR              KKAH+M
Sbjct: 205 WYRAKKKAYTKYSKKWQDEDGKKEIERDFAKMKKYCKVIRVIAHTQMKLLKKRQKKAHIM 264

Query: 168 EIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 227
           E+QVNGG+V QKVD+A    EK +PI+ VF +DE ID IGVT+G+G++GV +RW   +LP
Sbjct: 265 EVQVNGGTVNQKVDWAREKLEKAVPIEQVFAQDENIDCIGVTRGRGFKGVTSRWHCKKLP 324

Query: 228 RKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA 276
           RKTH+GLRKVACIGAWHP+RV F+VARAGQ GYHHRTE+NKKIY++GK 
Sbjct: 325 RKTHKGLRKVACIGAWHPSRVQFSVARAGQKGYHHRTEINKKIYRIGKG 373


>gi|209732474|gb|ACI67106.1| 60S ribosomal protein L3 [Salmo salar]
          Length = 403

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 205/319 (64%), Positives = 253/319 (79%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+ RHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSRRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VVVGVVGYV+TPRGLRS  T++A+H+++E +RRFY+
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGVVGYVETPRGLRSFKTIFAEHISDECKRRFYR 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ D+GKK ++     MKKYC V+R              KK+HL
Sbjct: 121 NWYKSKKKAFTKYCKKWQDDEGKKQLEKDFASMKKYCQVVRIIAHTQMRLLPLRQKKSHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           ME+Q+NGGS++ KVD+A    E+ IPI  VF +DEMID+IGVTKG GY+GV +RW   +L
Sbjct: 181 MEVQLNGGSISDKVDWARERLEQSIPITNVFTQDEMIDVIGVTKGHGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTHRGLRKVACIGAWHP+RV+F+VARAGQ GYHHRTE+NKKIYK+G+  +        
Sbjct: 241 PRKTHRGLRKVACIGAWHPSRVAFSVARAGQKGYHHRTEINKKIYKIGQGYRTKDGKLVK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A TE+D S   ++ L G
Sbjct: 301 NNAATEYDLSNKSITPLGG 319


>gi|213510850|ref|NP_001135078.1| 60S ribosomal protein L3 [Salmo salar]
 gi|209731890|gb|ACI66814.1| 60S ribosomal protein L3 [Salmo salar]
 gi|209738508|gb|ACI70123.1| 60S ribosomal protein L3 [Salmo salar]
 gi|209738636|gb|ACI70187.1| 60S ribosomal protein L3 [Salmo salar]
 gi|223646872|gb|ACN10194.1| 60S ribosomal protein L3 [Salmo salar]
 gi|223672733|gb|ACN12548.1| 60S ribosomal protein L3 [Salmo salar]
          Length = 403

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 205/319 (64%), Positives = 252/319 (78%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+ RHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSRRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VVVGVVGYV+TPRGLRS  T++A+H+++E +RRFY+
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGVVGYVETPRGLRSFKTIFAEHISDECKRRFYR 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ D+GKK ++     MKKYC V+R              KK+HL
Sbjct: 121 NWYKSKKKAFTKYCKKWQDDEGKKQLEKDFASMKKYCQVVRIIAHTQMRLLPLRQKKSHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           ME+Q+NGGS++ KVD+A    E+ IPI  VF +DEMID+IGVTKG GY+GV +RW   +L
Sbjct: 181 MEVQLNGGSISDKVDWARERLEQSIPITNVFTQDEMIDVIGVTKGHGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTHRGLRKVACIGAWHP+RV+F+VARAGQ GYHHRTE+NKKIYK+G+           
Sbjct: 241 PRKTHRGLRKVACIGAWHPSRVAFSVARAGQKGYHHRTEINKKIYKIGQGYHTKDGKLVK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A TE+D S   ++ L G
Sbjct: 301 NNAATEYDLSNKSITPLGG 319


>gi|308798657|ref|XP_003074108.1| ribosomal protein L3.e, cytosolic-rice sp|P35684|RL3_ORYSA 60S
           ribosomal p (ISS) [Ostreococcus tauri]
 gi|116000280|emb|CAL49960.1| ribosomal protein L3.e, cytosolic-rice sp|P35684|RL3_ORYSA 60S
           ribosomal p (ISS), partial [Ostreococcus tauri]
          Length = 421

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 207/308 (67%), Positives = 246/308 (79%), Gaps = 20/308 (6%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR+G+LGFLP+KR+ R RGKVK+FPKDD SKP  LTAF+G+KAGMTH+VRDVEKPGSK+H
Sbjct: 44  PRYGNLGFLPKKRSQRSRGKVKSFPKDDASKPPHLTAFMGFKAGMTHVVRDVEKPGSKMH 103

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
           KKE C+AVTIIE P LVVVG+VGYV+TP+GLR   TVWA+HLN+E+RRRFYKNW KSKKK
Sbjct: 104 KKEQCDAVTIIECPELVVVGLVGYVRTPKGLRGKKTVWAEHLNDEIRRRFYKNWFKSKKK 163

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAHLMEIQVNG 173
           AFTKY K Y     +KD    LE++KK C VIR               KKAH+MEIQVNG
Sbjct: 164 AFTKYAKNYTNGSIEKD----LEELKKSCDVIRVIAHTQVRKVKGLKQKKAHIMEIQVNG 219

Query: 174 GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 233
           G  A KVDF +  FEK +P+D+VFQ+DEMID+IGVTKGKG++GVVTRWGVT+LPRKTHRG
Sbjct: 220 GDAAAKVDFGFALFEKTVPVDSVFQQDEMIDLIGVTKGKGFQGVVTRWGVTKLPRKTHRG 279

Query: 234 LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRSVYL 293
           LRKV CIGAWHP+RVS+TVARAGQ GYHHRTE+NKK+YK+GKA   +  A T+FD +   
Sbjct: 280 LRKVGCIGAWHPSRVSYTVARAGQMGYHHRTELNKKVYKIGKAGTANFGANTDFDPTEKE 339

Query: 294 LSSLMGSF 301
           ++  MG F
Sbjct: 340 ITP-MGGF 346


>gi|358365675|dbj|GAA82297.1| 60S ribosomal protein L3 [Aspergillus kawachii IFO 4308]
          Length = 389

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 197/303 (65%), Positives = 239/303 (78%), Gaps = 17/303 (5%)

Query: 13  SLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKET 72
           SL +LPRKRA+RHRGKVK+FPKDDP KP  LTA +GYKAGMT +VRD+++PG+K+HKKE 
Sbjct: 10  SLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTATMGYKAGMTTVVRDLDRPGAKMHKKEV 69

Query: 73  CEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTK 132
            EA T+IETPPLV VGVVGY++TPRGLRSL TVWA+HL++EV+RRFYKNW KSKKKAFTK
Sbjct: 70  VEAATVIETPPLVAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYKNWYKSKKKAFTK 129

Query: 133 YTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLMEIQVNGGSVAQ 178
           Y KK+  ++G   I  +LE++KKYCTV+R              KKAHLMEIQVNGGSVA 
Sbjct: 130 YAKKHAEENG-ASITRELERIKKYCTVVRVLAHTQVRKTPLKQKKAHLMEIQVNGGSVAD 188

Query: 179 KVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA 238
           KVDFA   FEK I ID++F+KDEMID+I VTKG G++GV +RWG  +LPRKTH+GLRKVA
Sbjct: 189 KVDFARNLFEKPIEIDSIFEKDEMIDVIAVTKGHGFQGVTSRWGTKKLPRKTHKGLRKVA 248

Query: 239 CIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRSVYLLSSLM 298
           CIGAWHP  V +TVARAGQ GYHHRT  N K++++GK S E  +A T+FD S   ++  M
Sbjct: 249 CIGAWHPNHVQWTVARAGQMGYHHRTSCNHKVFRVGKGSDEG-NASTDFDISKKQITP-M 306

Query: 299 GSF 301
           G F
Sbjct: 307 GGF 309


>gi|198435984|ref|XP_002132034.1| PREDICTED: similar to ribosomal protein L3 [Ciona intestinalis]
          Length = 411

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 193/321 (60%), Positives = 248/321 (77%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVKAFP+DDPSKPC LTAF+ YKAGMTH+VR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKAFPRDDPSKPCHLTAFISYKAGMTHVVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  +AVTI+E PP++VVGV+GY++TPRGLR+L T++A+HL++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVDAVTILEAPPMIVVGVIGYIETPRGLRTLKTLFAEHLSDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW   KKKAFTK  +K++ ++GK+ I     +MKKYC VIR              KK+H+
Sbjct: 121 NWYACKKKAFTKSCRKWQDEEGKRQIDRDFNQMKKYCKVIRVIAHTQMKLLPITQKKSHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG++ +KVD+A    EK +P+  +F KDEMIDIIGV KG G +GV +RW   +L
Sbjct: 181 MEIQVNGGTIPEKVDYARDLLEKPVPVSNIFAKDEMIDIIGVNKGHGEKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------ 280
           PRKTH+GLRKVACIGAWHPARV+++VAR+GQ GYHHRTE+NKKIY+LG    +       
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVAYSVARSGQKGYHHRTEVNKKIYRLGAGIHKEGGKLIK 300

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           ++A TE D +   ++  MG F
Sbjct: 301 NNAATETDITDKSITP-MGGF 320


>gi|121543847|gb|ABM55588.1| putative ribosomal protein L3 [Maconellicoccus hirsutus]
          Length = 406

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 195/321 (60%), Positives = 245/321 (76%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+GF P+KRA RHRG+VK+FPKDDPSKP  LT FLGYKAGMTH+VR+ 
Sbjct: 1   MSHRKFSAPRHGSMGFYPKKRARRHRGRVKSFPKDDPSKPVHLTTFLGYKAGMTHVVREA 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  E VTIIETPP+V+VGVVGY++TP GL++L TVWA+HL+E+ RRRFYK
Sbjct: 61  DRPGSKVNKKEIVEPVTIIETPPMVIVGVVGYIETPHGLKALSTVWAEHLSEDCRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW K+KK+AFTK +KK++   G+K I  +L K+ KYC V+R              KK+H+
Sbjct: 121 NWYKAKKRAFTKASKKWQDPLGRKAIDKELAKISKYCKVVRVIAHTQMKLLKFRQKKSHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+V +KV +A   FEK +P+  VF +DEMID I VTKGKGY+GV +RW   +L
Sbjct: 181 MEIQVNGGTVPEKVQWAKAHFEKAVPVSHVFAQDEMIDCIAVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYHHRTE+NKKIY++G            
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVVK 300

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           ++A TE+D +   ++  MG F
Sbjct: 301 NNASTEYDLTEKTITP-MGGF 320


>gi|164605513|dbj|BAF98579.1| ribosomal protein L3 [Solea senegalensis]
          Length = 403

 Score =  405 bits (1042), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 202/319 (63%), Positives = 251/319 (78%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+ RHRGK K+FPKDDP+KP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSRRHRGKAKSFPKDDPNKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP++VVGVVGYV TPRGLRS  T++A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMMVVGVVGYVNTPRGLRSFKTIFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ DDGKK ++     MKKYC ++R              K+AHL
Sbjct: 121 NWYKSKKKAFTKYCKKWQDDDGKKQLEKDFAAMKKYCQIVRVICHTQMRLLPLKQKRAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           ME+Q+NGG+++ KVD+A    E+ +PI+ VF +DEMID+IGVTKG GY+GV +RW   +L
Sbjct: 181 MEVQLNGGTISDKVDWAREKLEQAVPINTVFTQDEMIDVIGVTKGHGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYHTKEGKLVK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A TE+D S   ++ L G
Sbjct: 301 NNASTEYDLSNKSINPLGG 319


>gi|213403598|ref|XP_002172571.1| 60S ribosomal protein L3 [Schizosaccharomyces japonicus yFS275]
 gi|213406091|ref|XP_002173817.1| 60S ribosomal protein L3 [Schizosaccharomyces japonicus yFS275]
 gi|212000618|gb|EEB06278.1| 60S ribosomal protein L3-A [Schizosaccharomyces japonicus yFS275]
 gi|212001864|gb|EEB07524.1| 60S ribosomal protein L3-A [Schizosaccharomyces japonicus yFS275]
          Length = 388

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 204/315 (64%), Positives = 253/315 (80%), Gaps = 18/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSH KFE PRHGSLGFLPRKRA+R RGKVK+FPKDD SKP  LTAFLGYKAGMTHIVRD+
Sbjct: 1   MSHCKFEQPRHGSLGFLPRKRAARARGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  EAVT++ETPP+VVVGVVGYV+TPRGLRSL TVWA+HL+EE++RRFYK
Sbjct: 61  DRPGSKMHKREILEAVTVLETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEIKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KKY   +  + I  +LE++KKYC+V+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAKKYA--ETTQSITRELERIKKYCSVVRVLAHTQIRKTPLTQKKAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGGSVA KV++A   FEK + + +VF+++E++D+IG+TKGKG EGV TRWG  RL
Sbjct: 179 MEIQINGGSVADKVEWAREHFEKTVDVKSVFEQNEIVDVIGITKGKGVEGVTTRWGTKRL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHP+ V +TVARAG NGY HRT++N KIY++G +  ++ +  T+
Sbjct: 239 PRKTHRGLRKVACIGAWHPSNVGWTVARAGNNGYMHRTQLNSKIYRIG-SGDDAKNGATD 297

Query: 287 FDRSVYLLSSLMGSF 301
           FD +   ++  MG F
Sbjct: 298 FDATEKRITP-MGGF 311


>gi|414588491|tpg|DAA39062.1| TPA: hypothetical protein ZEAMMB73_842297 [Zea mays]
          Length = 347

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 195/252 (77%), Positives = 217/252 (86%), Gaps = 16/252 (6%)

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
           ++LHKKETCEAVTIIETPPLV+VG+V YVKTPRGLR+L +VWAQHL+EEVRRRFYKNWCK
Sbjct: 23  TELHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEEVRRRFYKNWCK 82

Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAHLMEI 169
           SKKKAFTKY  KYE D GKK+IQ QLEKMKKY +VIR               KKAHLMEI
Sbjct: 83  SKKKAFTKYALKYENDAGKKEIQLQLEKMKKYASVIRVIAHTQIRKMKGLKQKKAHLMEI 142

Query: 170 QVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 229
           QVNGG++A KVD+ Y FFEK++P+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK
Sbjct: 143 QVNGGTIADKVDYGYKFFEKEVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 202

Query: 230 THRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 289
           THRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GKA QE+H A TEFDR
Sbjct: 203 THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKAGQETHDASTEFDR 262

Query: 290 SVYLLSSLMGSF 301
           +   ++  MG F
Sbjct: 263 TEKDITP-MGGF 273


>gi|196000674|ref|XP_002110205.1| expressed hypothetical protein [Trichoplax adhaerens]
 gi|190588329|gb|EDV28371.1| expressed hypothetical protein [Trichoplax adhaerens]
          Length = 399

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 196/312 (62%), Positives = 244/312 (78%), Gaps = 15/312 (4%)

Query: 2   SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
           SHRKF  PRHGSLGFLPRKR  +HRGKVK+FPKDD +KPC LTAF+ YKAGMTH++R+ +
Sbjct: 8   SHRKFSAPRHGSLGFLPRKRTKKHRGKVKSFPKDDATKPCHLTAFMAYKAGMTHVLREPD 67

Query: 62  KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
           +PGSK++KKE  EAVTI+ETPP+VVVGVVGY++TPRGLR+  TVWA+HLNEE +RRFYKN
Sbjct: 68  RPGSKMNKKEVVEAVTILETPPMVVVGVVGYIETPRGLRTYKTVWAEHLNEECKRRFYKN 127

Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLM 167
           W +SKKKAFTK  K+Y   +G + I+   EKMKKYC VIR              KK+H+M
Sbjct: 128 WYRSKKKAFTKSCKRYGDANGVQTIERDFEKMKKYCKVIRVIAHTQIRLVALRQKKSHVM 187

Query: 168 EIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 227
           EIQVNGG++ +KVD+A    EK++P D VF +DEMIDIIG TKGKG+ GV  RWG  +LP
Sbjct: 188 EIQVNGGNIVEKVDYARALLEKEVPADTVFSQDEMIDIIGATKGKGFRGVTFRWGTKKLP 247

Query: 228 RKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEF 287
           RKTH+GLRKVACIG+WHP+RV F++ARAGQ GYHHRTE+NKKIY++G    E  +A T +
Sbjct: 248 RKTHKGLRKVACIGSWHPSRVGFSIARAGQTGYHHRTEVNKKIYRIGSGKDEK-NASTGY 306

Query: 288 DRSVYLLSSLMG 299
           D +V  ++ + G
Sbjct: 307 DTTVKKITPVGG 318


>gi|344302517|gb|EGW32791.1| 60S ribosomal protein L3 [Spathaspora passalidarum NRRL Y-27907]
          Length = 389

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 204/315 (64%), Positives = 251/315 (79%), Gaps = 18/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSLGFLPRKRAS  RG+VK+FPKD  SKP  LTAFLGYKAGMT IVRD+
Sbjct: 1   MSHRKYEAPRHGSLGFLPRKRASNQRGRVKSFPKDVKSKPVALTAFLGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  EA T+++TPP+VVVGVVGYV+TPRGLRSL TVWA+HL+EEVRRRFYK
Sbjct: 61  DRPGSKMHKREVVEAATVVDTPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY+ KY  D   K ++ +L ++KKY +V+R              KKAHL
Sbjct: 121 NWFKSKKKAFTKYSTKYAGD--AKQVETELARIKKYASVVRVLAHTQIKKTPLAQKKAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQ+NGGSV+ KVD+A   FEK++ + +VF+++EMID+I VTKG G+EGV  RWG  +L
Sbjct: 179 AEIQINGGSVSDKVDWAREHFEKEVSVSSVFEQNEMIDVIAVTKGHGFEGVTHRWGTKKL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPA V++TVARAGQNGYHHRT +N K+Y++G  + ES+ A TE
Sbjct: 239 PRKTHRGLRKVACIGAWHPANVNWTVARAGQNGYHHRTSINHKVYRVGSGADESNGA-TE 297

Query: 287 FDRSVYLLSSLMGSF 301
           FDR+   ++  MG F
Sbjct: 298 FDRTKKTINP-MGGF 311


>gi|209734892|gb|ACI68315.1| 60S ribosomal protein L3 [Salmo salar]
 gi|209738572|gb|ACI70155.1| 60S ribosomal protein L3 [Salmo salar]
          Length = 403

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 204/319 (63%), Positives = 251/319 (78%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHG LGFLPRKR+ RHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGFLGFLPRKRSRRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VVVGVVGYV+TPRGLRS  T++A+H+++E +RRFY+
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGVVGYVETPRGLRSFKTIFAEHISDECKRRFYR 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ D+GKK ++     MKKYC V+R              KK+HL
Sbjct: 121 NWYKSKKKAFTKYCKKWQDDEGKKQLEKDFASMKKYCQVVRIIAHTQMRLLPLRQKKSHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           ME+Q+NGGS++ KVD+A    E+ IPI  VF +DEMID+IGVTKG GY+GV +RW   +L
Sbjct: 181 MEVQLNGGSISDKVDWARERLEQSIPITNVFTQDEMIDVIGVTKGHGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTHRGLRKVACIGAWHP+RV+F+VARAGQ GYHHRTE+NKKIYK+G+           
Sbjct: 241 PRKTHRGLRKVACIGAWHPSRVAFSVARAGQKGYHHRTEINKKIYKIGQGYHTKDGKLVK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A TE+D S   ++ L G
Sbjct: 301 NNAATEYDLSNKSITPLGG 319


>gi|391335187|ref|XP_003741977.1| PREDICTED: 60S ribosomal protein L3-like [Metaseiulus occidentalis]
          Length = 412

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 195/321 (60%), Positives = 245/321 (76%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS GFLPRKR +RHRGKVK+FPKDD +KP  LTAFLGYK+GMTHIVR+V
Sbjct: 1   MSHRKFHAPRHGSTGFLPRKRCARHRGKVKSFPKDDKTKPVHLTAFLGYKSGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           +KPGSK++KKE  EAVT+IETPP+V++GVVGY++TPRGLR+L T++A+H++++ RRRFYK
Sbjct: 61  DKPGSKVNKKEVVEAVTVIETPPIVIIGVVGYIETPRGLRALKTIFAEHVSDDARRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW  SKKKAFT+   K+   +G K I+   +K++KYCTV+R              KKAH+
Sbjct: 121 NWYNSKKKAFTRSALKWRQPEGLKMIERDFKKIQKYCTVVRVIVHTQMSMLKRRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGGS+A K+ FA    EK +PI  VF +DEMIDIIGVTKG G +GV +RW   +L
Sbjct: 181 MEIQLNGGSIADKIKFAREHMEKAVPIKNVFAQDEMIDIIGVTKGHGVKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYHHRTE+NKKIY++G           S
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEINKKIYRIGDGFHTVDGKLVS 300

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           ++  TE+D +   ++  MG F
Sbjct: 301 NNGSTEYDNTNKSINP-MGGF 320


>gi|332859844|ref|XP_525601.3| PREDICTED: 60S ribosomal protein L3, partial [Pan troglodytes]
          Length = 386

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 195/302 (64%), Positives = 242/302 (80%), Gaps = 20/302 (6%)

Query: 18  PRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVT 77
           PRKR+SRHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V++PGSK++KKE  EAVT
Sbjct: 1   PRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVT 60

Query: 78  IIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKY 137
           I+ETPP+VVVG+VGYV+TPRGLR+  TV+A+H+++E +RRFYKNW KSKKKAFTKY KK+
Sbjct: 61  IVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKW 120

Query: 138 ETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLMEIQVNGGSVAQKVDFA 183
           + +DGKK ++     MKKYC VIR              KKAHLMEIQVNGG+VA+K+D+A
Sbjct: 121 QDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWA 180

Query: 184 YGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAW 243
               E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW   +LPRKTHRGLRKVACIGAW
Sbjct: 181 RERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAW 240

Query: 244 HPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQESHSAMTEFDRSVYLLSSL 297
           HPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           ++A T++D S   ++ L
Sbjct: 241 HPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPL 300

Query: 298 MG 299
            G
Sbjct: 301 GG 302


>gi|264667433|gb|ACY71302.1| ribosomal protein L3 [Chrysomela tremula]
          Length = 414

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 204/321 (63%), Positives = 246/321 (76%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP  LTAF+ YKAGMTH+VR+ 
Sbjct: 1   MSHRKFSAPRHGSMGFYPKKRSQRHRGKVKAFPKDDPSKPVHLTAFISYKAGMTHVVREA 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSKL+KKE  EAVTI+E PP+VVVGVVGY++TP GLR+L TVWA+HL+E+ RRRFYK
Sbjct: 61  DRPGSKLNKKEIVEAVTILEAPPMVVVGVVGYIETPHGLRALATVWAEHLSEDCRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTK +KK+  D GKK I+   +K+ KYC V+R              KKAH+
Sbjct: 121 NWYKSKKKAFTKASKKWSDDLGKKSIEKDFKKIIKYCKVVRVIAHTQMKLLKQRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGGS+A KV +A   FEK IP+  VF +DEMID IGVTKG GY+GV +RW   +L
Sbjct: 181 MEIQLNGGSIADKVAWARAHFEKPIPVSEVFAQDEMIDCIGVTKGHGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G            
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGAGIHTKDGKVIK 300

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           ++A T++D S   ++  MG F
Sbjct: 301 NNAATDYDLSEKTITP-MGGF 320


>gi|302658162|ref|XP_003020788.1| hypothetical protein TRV_05095 [Trichophyton verrucosum HKI 0517]
 gi|291184652|gb|EFE40170.1| hypothetical protein TRV_05095 [Trichophyton verrucosum HKI 0517]
          Length = 565

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 193/304 (63%), Positives = 237/304 (77%), Gaps = 19/304 (6%)

Query: 12  GSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKE 71
           GSL +LPRKRA+RHRGKVK+FPKDDP KP  LTA +GYKAGMT IVRD+E+PG+K+H+KE
Sbjct: 33  GSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTATMGYKAGMTTIVRDLERPGAKMHRKE 92

Query: 72  TCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFT 131
             EAVTI+ETPP++ VG+VGY++TPRGLRSL TVWA HL++EV+RRFYKNW KSKKKAFT
Sbjct: 93  IVEAVTIVETPPMIAVGIVGYIETPRGLRSLTTVWADHLSDEVKRRFYKNWYKSKKKAFT 152

Query: 132 KYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLMEIQVNGGSVA 177
           +Y K   T         +LE++K YCTV+R              KKAHLMEIQVNGGS+A
Sbjct: 153 RYAK---THADAATTTRELERIKNYCTVVRLLAHTQIRKTPLKQKKAHLMEIQVNGGSIA 209

Query: 178 QKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKV 237
            KV+FA+G FEK I +D+VF+KDE++D+I VTKG G+ GV +RWG  +LPRKTH+GLRKV
Sbjct: 210 DKVEFAHGLFEKPIDVDSVFEKDEVVDVIAVTKGHGFSGVTSRWGTKKLPRKTHKGLRKV 269

Query: 238 ACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRSVYLLSSL 297
           ACIGAWHP+ V +TVARAGQ+GYHHRT  N KIY++GKA  E  +A TEFD S   ++  
Sbjct: 270 ACIGAWHPSHVQWTVARAGQDGYHHRTSANHKIYRIGKADDEG-NASTEFDVSKKRITP- 327

Query: 298 MGSF 301
           MG F
Sbjct: 328 MGGF 331


>gi|197632293|gb|ACH70870.1| ribosomal protein L3 [Salmo salar]
          Length = 403

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 204/319 (63%), Positives = 251/319 (78%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+ RHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSRRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VVVGVVGYV+TPRGLRS  T++A+H+++E +RRFY+
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGVVGYVETPRGLRSFKTIFAEHISDECKRRFYR 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ D+GKK ++     MKKYC V+R              KK+HL
Sbjct: 121 NWYKSKKKAFTKYCKKWQDDEGKKQLEKDFASMKKYCQVVRIIAHTQMRLLPLRQKKSHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           ME+Q+NGGS++ KVD+A    E+ IPI  VF +DEMID+IGVTKG GY+GV +RW   +L
Sbjct: 181 MEVQLNGGSISDKVDWARERLEQSIPITNVFTQDEMIDVIGVTKGHGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTHRGLRKVACIGAWH +RV+F+VARAGQ GYHHRTE+NKKIYK+G+           
Sbjct: 241 PRKTHRGLRKVACIGAWHLSRVAFSVARAGQKGYHHRTEINKKIYKIGQGYHTKDGKLVK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A TE+D S   ++ L G
Sbjct: 301 NNAATEYDLSNKSITPLGG 319


>gi|302307578|ref|NP_984302.2| 60S ribosomal protein L3 [Ashbya gossypii ATCC 10895]
 gi|442570009|sp|Q759R7.2|RL3_ASHGO RecName: Full=60S ribosomal protein L3
 gi|299789066|gb|AAS52126.2| ADR206Wp [Ashbya gossypii ATCC 10895]
 gi|374107517|gb|AEY96425.1| FADR206Wp [Ashbya gossypii FDAG1]
          Length = 387

 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 200/315 (63%), Positives = 250/315 (79%), Gaps = 18/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHG LGFLPRKRA+  RG+VKAFPKDD SKP  LT+FLGYKAGMT IVRD+
Sbjct: 1   MSHRKYEAPRHGHLGFLPRKRAASIRGRVKAFPKDDKSKPVALTSFLGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK HK+E  EAV++++TPP+VVVGVVGY++TPRGLRSL TVWA+HL++E++RRFYK
Sbjct: 61  DRPGSKFHKREIVEAVSVVDTPPMVVVGVVGYIETPRGLRSLTTVWAEHLSDEIKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY+ KY  D     I+ +L ++KKY +V+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDGAA--IERELARIKKYASVVRVLAHTQVRKTPLVQKKAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQ+NGGSV++KVD+A   FEK + +D+VF+++EMID+I VTKG G+EGV  RWG  +L
Sbjct: 179 AEIQLNGGSVSEKVDWAREHFEKTVSVDSVFEQNEMIDVIAVTKGHGFEGVTHRWGTKKL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPA V +TVARAGQNGYHHRT +N K+Y++GK   E ++A TE
Sbjct: 239 PRKTHRGLRKVACIGAWHPAHVMWTVARAGQNGYHHRTSINHKVYRIGKGGDEGNAA-TE 297

Query: 287 FDRSVYLLSSLMGSF 301
           FDR+   ++  MG F
Sbjct: 298 FDRTKKTITP-MGGF 311


>gi|363894901|gb|AEW42982.1| putative 60S ribosomal protein L3 [Haliotis diversicolor]
          Length = 400

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 195/321 (60%), Positives = 242/321 (75%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS GFLP+KR+ R RGKVK+FPKDD SKP  LT FL YKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSKGFLPKKRSRRQRGKVKSFPKDDKSKPVHLTTFLTYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK +KKE  EAVTI+E PP+V+ GV GY++TP GLR+L T+WA+HL+EE RRRFYK
Sbjct: 61  DRPGSKTNKKEVVEAVTILEAPPMVIAGVTGYIETPHGLRTLKTIWAEHLSEECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW +SKKKAFTK  KK++ + G K+I     K+KKYCT+IR              KKAHL
Sbjct: 121 NWSRSKKKAFTKSNKKWQDEAGMKEIDRDFAKLKKYCTIIRVIAHTQTKLLRKRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGGS+A KVD+A    EK +P+ +VF++DE+ID+IGVTKG+G +GV +RW   +L
Sbjct: 181 MEIQLNGGSIADKVDWAREHLEKPVPVSSVFEQDEVIDVIGVTKGRGVKGVTSRWHCKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHP+RV +TVARAGQ GYHHRTE NKKIY+LG            
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVQYTVARAGQKGYHHRTERNKKIYRLGAGIHTKDGKVIK 300

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           ++A T+FD +   ++  MG F
Sbjct: 301 NNAATDFDPTEKTITP-MGGF 320


>gi|326475993|gb|EGE00003.1| 60S ribosomal protein L3 [Trichophyton tonsurans CBS 112818]
 gi|326485021|gb|EGE09031.1| 60S ribosomal protein L3 [Trichophyton equinum CBS 127.97]
          Length = 410

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 193/304 (63%), Positives = 237/304 (77%), Gaps = 19/304 (6%)

Query: 12  GSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKE 71
           GSL +LPRKRA+RHRGKVK+FPKDDP KP  LTA +GYKAGMT IVRD+E+PG+K+H+KE
Sbjct: 32  GSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTATMGYKAGMTTIVRDLERPGAKMHRKE 91

Query: 72  TCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFT 131
             EAVTI+ETPP++ VG+VGY++TPRGLRSL TVWA HL++EV+RRFYKNW KSKKKAFT
Sbjct: 92  IVEAVTIVETPPMIAVGIVGYIETPRGLRSLTTVWADHLSDEVKRRFYKNWYKSKKKAFT 151

Query: 132 KYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLMEIQVNGGSVA 177
           +Y K   T         +LE++K YCTV+R              KKAHLMEIQVNGGSVA
Sbjct: 152 RYAK---THADAATTTRELERIKNYCTVVRLLAHTQIRKTPLKQKKAHLMEIQVNGGSVA 208

Query: 178 QKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKV 237
            KV+FA+G FEK I +D+VF+KDE++D+I VTKG G+ GV +RWG  +LPRKTH+GLRKV
Sbjct: 209 DKVEFAHGLFEKPIDVDSVFEKDEVVDVIAVTKGHGFSGVTSRWGTKKLPRKTHKGLRKV 268

Query: 238 ACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRSVYLLSSL 297
           ACIGAWHP+ V +TVARAGQ+GYHHRT  N KIY++GKA  E  +A T+FD S   ++  
Sbjct: 269 ACIGAWHPSHVQWTVARAGQDGYHHRTSANHKIYRIGKADDEG-NASTDFDVSKKRITP- 326

Query: 298 MGSF 301
           MG F
Sbjct: 327 MGGF 330


>gi|126136060|ref|XP_001384554.1| 60S ribosomal protein L3 [Scheffersomyces stipitis CBS 6054]
 gi|126091752|gb|ABN66525.1| 60S large subunit ribosomal protein L3.e [Scheffersomyces stipitis
           CBS 6054]
          Length = 389

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 202/315 (64%), Positives = 250/315 (79%), Gaps = 18/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSLGFLPRKRA++H+G+VK+FPKD  SKP  LTAFLGYKAGMT IVRD+
Sbjct: 1   MSHRKYEAPRHGSLGFLPRKRAAKHQGRVKSFPKDVKSKPVALTAFLGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  EA T+++TPP+VVVGVVGYV+TPRGLRSL TVWA+HL+E+VRRRFYK
Sbjct: 61  DRPGSKMHKREVVEAATVVDTPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEDVRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY+ KY  D  +  ++ +L ++KKY +V+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDGAQ--VERELARIKKYASVVRVLVHTQIKKTPLSQKKAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQVNGGS+A KVDFA   FEK + + +VF+++EMID++ VTKG G+EGV  RWG  +L
Sbjct: 179 AEIQVNGGSIADKVDFAKEHFEKTVSVSSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKKL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPA V++TVARAGQNGYHHRT +N K+Y++G    ES S  TE
Sbjct: 239 PRKTHRGLRKVACIGAWHPANVNWTVARAGQNGYHHRTSINHKVYRVGTEGDES-SGATE 297

Query: 287 FDRSVYLLSSLMGSF 301
           FDR+   ++  MG F
Sbjct: 298 FDRTKKTINP-MGGF 311


>gi|302502186|ref|XP_003013084.1| hypothetical protein ARB_00629 [Arthroderma benhamiae CBS 112371]
 gi|291176646|gb|EFE32444.1| hypothetical protein ARB_00629 [Arthroderma benhamiae CBS 112371]
          Length = 557

 Score =  402 bits (1034), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 192/304 (63%), Positives = 237/304 (77%), Gaps = 19/304 (6%)

Query: 12  GSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKE 71
           GSL +LPRKRA+RHRGKVK+FPKDDP KP  LTA +GYKAGMT IVRD+E+PG+K+H+KE
Sbjct: 33  GSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTATMGYKAGMTTIVRDLERPGAKMHRKE 92

Query: 72  TCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFT 131
             EAVTI+ETPP++ VG+VGY++TPRGLRSL TVWA HL++EV+RRFYKNW KSKKKAFT
Sbjct: 93  IVEAVTIVETPPMIAVGIVGYIETPRGLRSLTTVWADHLSDEVKRRFYKNWYKSKKKAFT 152

Query: 132 KYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLMEIQVNGGSVA 177
           +Y K   T         +LE++K YCTV+R              KKAHLMEIQVNGGS+A
Sbjct: 153 RYAK---THADAASTTRELERIKNYCTVVRLLAHTQIRKTPLKQKKAHLMEIQVNGGSIA 209

Query: 178 QKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKV 237
            KV+FA+G FEK I +D+VF+KDE++D+I VTKG G+ GV +RWG  +LPRKTH+GLRKV
Sbjct: 210 DKVEFAHGLFEKPIDVDSVFEKDEVVDVIAVTKGHGFSGVTSRWGTKKLPRKTHKGLRKV 269

Query: 238 ACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRSVYLLSSL 297
           ACIGAWHP+ V +TVARAGQ+GYHHRT  N KIY++GKA  E  +A T+FD S   ++  
Sbjct: 270 ACIGAWHPSHVQWTVARAGQDGYHHRTSANHKIYRIGKADDEG-NASTDFDVSKKRITP- 327

Query: 298 MGSF 301
           MG F
Sbjct: 328 MGGF 331


>gi|94468802|gb|ABF18250.1| ribosomal protein L3 [Aedes aegypti]
          Length = 415

 Score =  402 bits (1034), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 194/321 (60%), Positives = 242/321 (75%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+ F PRKRASRH+G++KAFPKDDP+KP  LTAFL YKAGMTHIVR+ 
Sbjct: 1   MSHRKFSAPRHGSMAFAPRKRASRHQGRIKAFPKDDPAKPVHLTAFLAYKAGMTHIVREA 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VVVG VGY++TP G R+LC VWAQHL+EE RRRFYK
Sbjct: 61  DRPGSKINKKEVVEAVTILETPPIVVVGAVGYIETPFGPRALCNVWAQHLSEECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW  SKKKAFTK +KK+  D GKK I+   +KM +YC  IR              KKAH+
Sbjct: 121 NWHASKKKAFTKASKKWTDDLGKKSIEDNFKKMIRYCKFIRVIAHSQIRLIKQGQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           +EIQ+NGG++  KV++     EK +P+  VF++DEMID + VTKGKG++GV +RW   +L
Sbjct: 181 IEIQLNGGTIEDKVNWVKEHLEKPVPVADVFRQDEMIDCVAVTKGKGFKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHP+RV+FTVARAGQ GYHHRTE+NKKIY++G            
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVVK 300

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           +SA TE+D +   ++  MG F
Sbjct: 301 NSAATEYDLTDKSITP-MGGF 320


>gi|429329033|gb|AFZ80792.1| 60S ribosomal protein L3, putative [Babesia equi]
          Length = 388

 Score =  402 bits (1034), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 198/315 (62%), Positives = 243/315 (77%), Gaps = 20/315 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PR GSLGFLPRKR   HRGKV++FPKDDPS P   TAF+GYKAGMTH+V +V
Sbjct: 1   MSHRKFERPRSGSLGFLPRKRCKMHRGKVRSFPKDDPSLPPHFTAFMGYKAGMTHVVTEV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSKLHKKE  EAVTI+ETPP+VVVG+VGY++TP+GL+ L TVWA HL++E RRRFYK
Sbjct: 61  DRPGSKLHKKEVVEAVTIVETPPMVVVGLVGYIETPKGLKVLTTVWAAHLSDECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKYTKK++  +GK D   ++ ++K Y TV+R              +KAH+
Sbjct: 121 NWYKSKKKAFTKYTKKFQ--EGKVD--KEISRIKNYATVVRAICHTQPSKLSISLRKAHI 176

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           ME+QVNGGS+A KVDF  G FEK IP+ +VF ++EM+D +GVTKG G +GVV+R+GVTRL
Sbjct: 177 MEVQVNGGSIADKVDFVTGLFEKPIPVSSVFSENEMLDTVGVTKGHGTKGVVSRYGVTRL 236

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPARV F V R GQ GY HRTE NKKIY++G  +    +A T+
Sbjct: 237 PRKTHRGLRKVACIGAWHPARVQFQVPRHGQKGYFHRTERNKKIYRIGLGTN-PRNASTD 295

Query: 287 FDRSVYLLSSLMGSF 301
            D +   ++  MG F
Sbjct: 296 ADLTEKKITP-MGGF 309


>gi|194743868|ref|XP_001954422.1| GF16740 [Drosophila ananassae]
 gi|190627459|gb|EDV42983.1| GF16740 [Drosophila ananassae]
          Length = 415

 Score =  402 bits (1033), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 196/321 (61%), Positives = 241/321 (75%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+ F P+KR++RHRGKVKAFPKDD  KP  LT F+GYKAGMTHIVR+ 
Sbjct: 1   MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDAKKPVHLTCFIGYKAGMTHIVREA 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVT++ETPP++VVG VGY++TP GLR+L  VWAQHL+EE RRRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTK +KK+  D GKK I+    KM +YC VIR              KKAH+
Sbjct: 121 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHV 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGGS+  KV++A    EK IP+  VF +DEMID +GVTKGKG++GV +RW   +L
Sbjct: 181 MEIQLNGGSIEDKVNWARQHLEKPIPVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKKIY++G            
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIK 300

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           ++A TE+D +   ++  MG F
Sbjct: 301 NNASTEYDLTDKSITP-MGGF 320


>gi|300121321|emb|CBK21701.2| unnamed protein product [Blastocystis hominis]
 gi|300123206|emb|CBK24479.2| unnamed protein product [Blastocystis hominis]
 gi|300176312|emb|CBK23623.2| unnamed protein product [Blastocystis hominis]
 gi|300176758|emb|CBK25327.2| unnamed protein product [Blastocystis hominis]
          Length = 387

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 194/315 (61%), Positives = 244/315 (77%), Gaps = 16/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHG +GFLPRKR + +RG V++FPKD   +   LTAF+GYKAGMTHIVR +
Sbjct: 1   MSHRKYECPRHGHMGFLPRKRCTHNRGHVRSFPKDKADQKPHLTAFMGYKAGMTHIVRVL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK HK+E  EAVTI+ETPP+VVVG+VGYV+TPRGLR+L TV+A+HL++  +RRFYK
Sbjct: 61  DRPGSKAHKQEIVEAVTILETPPMVVVGIVGYVETPRGLRTLTTVFAEHLDDSCKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW  SKKKAFTKY  +  TD+GK+ ++ +L+K+  YC V+R              KKAHL
Sbjct: 121 NWYNSKKKAFTKYAARMATDEGKEAMEQKLKKIVDYCQVVRVLAHTQIQKLKIGQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG++ +KV FA    EK++ +  VF+  EMID IGVTKGKG+EGV TRWG TRL
Sbjct: 181 MEIQVNGGNMEEKVAFAKSLLEKEVKVSDVFEPSEMIDTIGVTKGKGFEGVTTRWGTTRL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHP+RV FTV RAGQNGYHHRT++NKKIY++G A+ ++ SA TE
Sbjct: 241 PRKTHRGLRKVACIGAWHPSRVHFTVPRAGQNGYHHRTDVNKKIYRIG-AAGDAKSASTE 299

Query: 287 FDRSVYLLSSLMGSF 301
            D +   ++  MG F
Sbjct: 300 ADLTEKSITP-MGGF 313


>gi|307204449|gb|EFN83156.1| 60S ribosomal protein L3 [Harpegnathos saltator]
          Length = 402

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 190/308 (61%), Positives = 243/308 (78%), Gaps = 21/308 (6%)

Query: 14  LGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 73
           +GF P+KR+ RHRGKVKAFPKDDPSKP  LTAF+GYKAGMTHIVR+ ++ GSK++KKE  
Sbjct: 1   MGFYPKKRSQRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHIVREADRQGSKINKKEIV 60

Query: 74  EAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKY 133
           EAVTI+ETPP++VVG+VGY++TP GLR+L TVWA+HL+E+ RRRFYKNW KSKKKAFTK 
Sbjct: 61  EAVTILETPPMIVVGIVGYIETPHGLRALSTVWAEHLSEDCRRRFYKNWYKSKKKAFTKA 120

Query: 134 TKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLMEIQVNGGSVAQK 179
           +KK++ D G+K I+A L+K+KKYC+V+R              KKAH+ME+Q+NGG++  K
Sbjct: 121 SKKWQDDIGRKSIEADLKKIKKYCSVVRIITHTQMKLLRQRQKKAHIMEVQLNGGTIEDK 180

Query: 180 VDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVAC 239
           V +A    EK +P+ +VF +DEMID+IGVTKGKGY+GV +RW   +LPRKTH+GLRKVAC
Sbjct: 181 VQWAREHLEKPVPVSSVFARDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHKGLRKVAC 240

Query: 240 IGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------SHSAMTEFDRSVYL 293
           IGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G+           ++A TE+D +   
Sbjct: 241 IGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGKIVKNNASTEYDLTEKT 300

Query: 294 LSSLMGSF 301
           ++  MG F
Sbjct: 301 ITP-MGGF 307


>gi|193580256|ref|XP_001951042.1| PREDICTED: 60S ribosomal protein L3-like [Acyrthosiphon pisum]
          Length = 408

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 195/321 (60%), Positives = 244/321 (76%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+GF P+KRA RHRG+VK+FPKDDPSKP  LTAF+ YKAGMTH+VR+ 
Sbjct: 1   MSHRKFSAPRHGSMGFYPKKRARRHRGRVKSFPKDDPSKPIHLTAFIAYKAGMTHVVREA 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSKL+KKE  E VTI+E PP+++VGVVGYV+TP GL+ L TV+A+HL+E+ RRRFYK
Sbjct: 61  DRPGSKLNKKEIVEPVTILEAPPMIIVGVVGYVETPYGLKPLKTVFAEHLSEDCRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAF KY++K++ ++GK+ I   L K+ KY  VIR              KKAH+
Sbjct: 121 NWYKSKKKAFVKYSRKWQDENGKRQIAKDLGKIAKYSKVIRVVAHTQMKLLKKRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+VA+KV +A   FEK +P+  VF  DEMID IGVTKG+GY+GV +RW   +L
Sbjct: 181 MEIQVNGGTVAEKVQWAKEHFEKPVPVSHVFAPDEMIDCIGVTKGRGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYHHRTE+NKKIY++G            
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEINKKIYRIGLGIHTKDGKVIK 300

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           ++A TE+D +   ++  MG F
Sbjct: 301 NNASTEYDLTEKTITP-MGGF 320


>gi|50549253|ref|XP_502097.1| 60S ribosomal protein L3 [Yarrowia lipolytica]
 gi|49647964|emb|CAG82417.1| YALI0C21560p [Yarrowia lipolytica CLIB122]
          Length = 387

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/315 (64%), Positives = 245/315 (77%), Gaps = 18/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHG LGFLPRKR ++ RGK K+FPKDD SKP  LTAFLGYKAGMT IVRD+
Sbjct: 1   MSHRKYEQPRHGHLGFLPRKRCTKSRGKAKSFPKDDKSKPVALTAFLGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++ GSK+ K+E  EA T+++TPP+VVVGVVGYV TPRGLRSL TVWA+HL+EEVRRRFYK
Sbjct: 61  DRRGSKMDKREIVEAATVVDTPPMVVVGVVGYVATPRGLRSLTTVWAEHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKK AFTKY K+YE D  +  +Q +LE++KKYCTV+R              KKAHL
Sbjct: 121 NWYKSKKTAFTKYAKQYEGDAAQ--VQKELERIKKYCTVVRVLAHTQPKLTPLKQKKAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQ+NGGSVA KV++A   FEK + ID VF++DEMID I +TKGKGYEG   RWG  +L
Sbjct: 179 AEIQINGGSVADKVEWAQQHFEKTVTIDTVFEQDEMIDAIAITKGKGYEGTTHRWGTKKL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPA V +TVAR+GQ+GYHHRT  N K+Y++GK   ES+ + TE
Sbjct: 239 PRKTHRGLRKVACIGAWHPANVQYTVARSGQDGYHHRTSANHKVYRVGKGGDESNGS-TE 297

Query: 287 FDRSVYLLSSLMGSF 301
           FDR+   ++  MG F
Sbjct: 298 FDRTPKTITP-MGGF 311


>gi|40882439|gb|AAR96131.1| RH62603p [Drosophila melanogaster]
          Length = 465

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 196/321 (61%), Positives = 240/321 (74%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+ F P+KR++RHRGKVKAFPKDD SKP  LT F+GYKAGMTHIVR+ 
Sbjct: 12  MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 71

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVT++ETPP++VVG VGY++TP GLR+L  VWAQHL+EE RRRFYK
Sbjct: 72  DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 131

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTK +KK+  D GKK I+    KM +YC VIR              KKAH+
Sbjct: 132 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHV 191

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGGS+  KV +A    EK I +  VF +DEMID +GVTKGKG++GV +RW   +L
Sbjct: 192 MEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKL 251

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKKIY++G            
Sbjct: 252 PRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIK 311

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           ++A TE+D +   ++  MG F
Sbjct: 312 NNASTEYDLTDKSITP-MGGF 331


>gi|50411414|ref|XP_457044.1| 60S ribosomal protein L3 [Debaryomyces hansenii CBS767]
 gi|74659529|sp|Q6BXM5.1|RL3_DEBHA RecName: Full=60S ribosomal protein L3
 gi|49652709|emb|CAG85030.1| DEHA2B01804p [Debaryomyces hansenii CBS767]
          Length = 389

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 203/315 (64%), Positives = 248/315 (78%), Gaps = 18/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSLGFLPRKR++  RG+VK+FPKD  SKP  LTAFLGYKAGMT +VRD+
Sbjct: 1   MSHRKYEAPRHGSLGFLPRKRSANIRGRVKSFPKDVKSKPVALTAFLGYKAGMTTVVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  EA T+++TPPLVVVGVVGYV+TPRGLRSL TVWA+HL+EEVRRRFYK
Sbjct: 61  DRPGSKMHKREIVEAATVVDTPPLVVVGVVGYVETPRGLRSLTTVWAEHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY+ KY  D  +  ++ +L ++KKY +V+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDGAQ--VERELARIKKYASVVRVLAHTQIKKTPLAQKKAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQVNGGSV+ KVD+A   FEK + +D+VF+KDEM+D+  VTKG G+EGV  RWG  +L
Sbjct: 179 AEIQVNGGSVSDKVDWAKEHFEKTVSVDSVFEKDEMVDVAAVTKGHGFEGVTHRWGTKKL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPA V +TVARAGQNG+HHRT +N K+Y++G A  ES S  TE
Sbjct: 239 PRKTHRGLRKVACIGAWHPANVQWTVARAGQNGFHHRTSINHKVYRVGSAGDES-SGATE 297

Query: 287 FDRSVYLLSSLMGSF 301
           FDR+   ++  MG F
Sbjct: 298 FDRTKKTINP-MGGF 311


>gi|17737907|ref|NP_524316.1| ribosomal protein L3, isoform A [Drosophila melanogaster]
 gi|442618558|ref|NP_731548.2| ribosomal protein L3, isoform H [Drosophila melanogaster]
 gi|195571809|ref|XP_002103895.1| GD18739 [Drosophila simulans]
 gi|3122718|sp|O16797.3|RL3_DROME RecName: Full=60S ribosomal protein L3
 gi|2384754|gb|AAC26144.1| ribosomal protein L3 [Drosophila melanogaster]
 gi|23170971|gb|AAF54610.2| ribosomal protein L3, isoform A [Drosophila melanogaster]
 gi|194199822|gb|EDX13398.1| GD18739 [Drosophila simulans]
 gi|440217317|gb|AAN13496.2| ribosomal protein L3, isoform H [Drosophila melanogaster]
          Length = 416

 Score =  400 bits (1028), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 196/321 (61%), Positives = 240/321 (74%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+ F P+KR++RHRGKVKAFPKDD SKP  LT F+GYKAGMTHIVR+ 
Sbjct: 1   MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVT++ETPP++VVG VGY++TP GLR+L  VWAQHL+EE RRRFYK
Sbjct: 61  DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTK +KK+  D GKK I+    KM +YC VIR              KKAH+
Sbjct: 121 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHV 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGGS+  KV +A    EK I +  VF +DEMID +GVTKGKG++GV +RW   +L
Sbjct: 181 MEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKKIY++G            
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIK 300

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           ++A TE+D +   ++  MG F
Sbjct: 301 NNASTEYDLTDKSITP-MGGF 320


>gi|195157752|ref|XP_002019760.1| GL12566 [Drosophila persimilis]
 gi|194116351|gb|EDW38394.1| GL12566 [Drosophila persimilis]
          Length = 415

 Score =  400 bits (1028), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 196/321 (61%), Positives = 240/321 (74%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+ F P+KR++RHRGKVKAFPKDD SKP  LT F+GYKAGMTHIVR+ 
Sbjct: 1   MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVT++ETPP++VVG VGY++TP GLR+L  VWAQHL+EE RRRFYK
Sbjct: 61  DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTK +KK+  D GKK I+    KM +YC VIR              KKAH+
Sbjct: 121 NWYKSKKKAFTKTSKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGGS+  KV +A    EK I +  VF +DEMID +GVTKGKG++GV +RW   +L
Sbjct: 181 MEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKKIY++G            
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIK 300

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           ++A TE+D +   ++  MG F
Sbjct: 301 NNASTEYDLTDKSITP-MGGF 320


>gi|254693009|gb|ACT79354.1| LP14077p [Drosophila melanogaster]
          Length = 418

 Score =  400 bits (1028), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 196/321 (61%), Positives = 240/321 (74%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+ F P+KR++RHRGKVKAFPKDD SKP  LT F+GYKAGMTHIVR+ 
Sbjct: 3   MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 62

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVT++ETPP++VVG VGY++TP GLR+L  VWAQHL+EE RRRFYK
Sbjct: 63  DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 122

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTK +KK+  D GKK I+    KM +YC VIR              KKAH+
Sbjct: 123 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHV 182

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGGS+  KV +A    EK I +  VF +DEMID +GVTKGKG++GV +RW   +L
Sbjct: 183 MEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKL 242

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKKIY++G            
Sbjct: 243 PRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIK 302

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           ++A TE+D +   ++  MG F
Sbjct: 303 NNASTEYDLTDKSITP-MGGF 322


>gi|194902102|ref|XP_001980590.1| GG17978 [Drosophila erecta]
 gi|190652293|gb|EDV49548.1| GG17978 [Drosophila erecta]
          Length = 416

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 196/321 (61%), Positives = 240/321 (74%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+ F P+KR++RHRGKVKAFPKDD SKP  LT F+GYKAGMTHIVR+ 
Sbjct: 1   MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVT++ETPP++VVG VGY++TP GLR+L  VWAQHL+EE RRRFYK
Sbjct: 61  DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTK +KK+  D GKK I+    KM +YC VIR              KKAH+
Sbjct: 121 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHV 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGGS+  KV +A    EK I +  VF +DEMID +GVTKGKG++GV +RW   +L
Sbjct: 181 MEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKKIY++G            
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIK 300

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           ++A TE+D +   ++  MG F
Sbjct: 301 NNASTEYDLTDKSITP-MGGF 320


>gi|195499987|ref|XP_002097183.1| GE26079 [Drosophila yakuba]
 gi|194183284|gb|EDW96895.1| GE26079 [Drosophila yakuba]
          Length = 416

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 196/321 (61%), Positives = 240/321 (74%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+ F P+KR++RHRGKVKAFPKDD SKP  LT F+GYKAGMTHIVR+ 
Sbjct: 1   MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVT++ETPP++VVG VGY++TP GLR+L  VWAQHL+EE RRRFYK
Sbjct: 61  DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTK +KK+  D GKK I+    KM +YC VIR              KKAH+
Sbjct: 121 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHV 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGGS+  KV +A    EK I +  VF +DEMID +GVTKGKG++GV +RW   +L
Sbjct: 181 MEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKKIY++G            
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIK 300

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           ++A TE+D +   ++  MG F
Sbjct: 301 NNASTEYDLTDKSITP-MGGF 320


>gi|60688481|gb|AAH91460.1| Ribosomal protein L3 [Danio rerio]
 gi|182889202|gb|AAI64784.1| Rpl3 protein [Danio rerio]
          Length = 403

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 201/319 (63%), Positives = 248/319 (77%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR  RHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRCKRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVT++ETPP++VVGVVGYV TPRGLRS  T++A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTVVETPPMIVVGVVGYVMTPRGLRSFKTIFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY K+++ ++GKK ++     MKKYC +IR              KK+HL
Sbjct: 121 NWYKSKKKAFTKYCKRWQDEEGKKQLEKDFSSMKKYCQIIRIIAHTQMRLLPHRQKKSHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG+++ KVD+A    E+ IPI  VF +DEMID+IGVTKG G +GV +RW   +L
Sbjct: 181 MEIQLNGGTISDKVDWAREKLEQSIPIANVFSQDEMIDVIGVTKGHGCKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G            
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGVGYHNKDGKLVK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   ++ L G
Sbjct: 301 NNASTDYDLSNKSINPLGG 319


>gi|323650150|gb|ADX97161.1| 60S ribosomal protein l3 [Perca flavescens]
          Length = 276

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 186/276 (67%), Positives = 226/276 (81%), Gaps = 14/276 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+ RHRGK K+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSRRHRGKAKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP++VVGVVGYV+TPRGLRS  T++A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMIVVGVVGYVETPRGLRSFKTIFAEHVSDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ DDGKK ++     MKKYC VIR              KK+HL
Sbjct: 121 NWYKSKKKAFTKYCKKWQDDDGKKQLEKDFASMKKYCQVIRIIAHTQMRLLPLAQKKSHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           ME+Q+NGG+++ KVD+A    E+ +PI+ VF +DEMID+IG+TKG  Y+GV +RW   +L
Sbjct: 181 MEVQLNGGNISDKVDWAREKLEQAVPINTVFTQDEMIDVIGITKGHRYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHH 262
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHH
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHH 276


>gi|307169360|gb|EFN62081.1| 60S ribosomal protein L3 [Camponotus floridanus]
          Length = 402

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 189/308 (61%), Positives = 241/308 (78%), Gaps = 21/308 (6%)

Query: 14  LGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 73
           +GF P+KR+ RHRGKVKAFPKDD +KP  LTAF+GYKAGMTH+VR+ ++PGSK++KKE  
Sbjct: 1   MGFYPKKRSQRHRGKVKAFPKDDSNKPVHLTAFIGYKAGMTHVVREADRPGSKVNKKEIV 60

Query: 74  EAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKY 133
           EAVTI+ETPP++VVG+VGY++TP GLR+L TVWA+HL+E+ RRRFYKNW KSKKKAFTK 
Sbjct: 61  EAVTILETPPMIVVGLVGYIETPHGLRALATVWAEHLSEDCRRRFYKNWYKSKKKAFTKA 120

Query: 134 TKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLMEIQVNGGSVAQK 179
           +KK++ D G+K I+A L+K+KKYC+V+R              KKAH+MEIQ+NGG++  K
Sbjct: 121 SKKWQDDLGRKSIEADLKKIKKYCSVVRIIAHTQMKLLRQRQKKAHIMEIQLNGGTIEDK 180

Query: 180 VDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVAC 239
           V +A    EK +P+  VF  DEMID+IGVTKGKGY+GV +RW   +LPRKTH+GLRKVAC
Sbjct: 181 VQWAREHLEKPVPVSNVFASDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHKGLRKVAC 240

Query: 240 IGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------SHSAMTEFDRSVYL 293
           IGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G+           ++A TE+D +   
Sbjct: 241 IGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGKIVKNNASTEYDLTEKT 300

Query: 294 LSSLMGSF 301
           ++  MG F
Sbjct: 301 ITP-MGGF 307


>gi|195329914|ref|XP_002031655.1| GM23925 [Drosophila sechellia]
 gi|194120598|gb|EDW42641.1| GM23925 [Drosophila sechellia]
          Length = 611

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 189/288 (65%), Positives = 227/288 (78%), Gaps = 14/288 (4%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+ F P+KR++RHRGKVKAFPKDD SKP  LT F+GYKAGMTHIVR+ 
Sbjct: 1   MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVT++ETPP++VVG VGY++TP GLR+L  VWAQHL+EE RRRFYK
Sbjct: 61  DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTK +KK+  D GKK I+    KM +YC VIR              KKAH+
Sbjct: 121 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHV 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGGS+  KV +A    EK I +  VF +DEMID +GVTKGKG++GV +RW   +L
Sbjct: 181 MEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLG 274
           PRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKKIY++G
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIG 288


>gi|198455295|ref|XP_001359937.2| GA18487 [Drosophila pseudoobscura pseudoobscura]
 gi|198133184|gb|EAL29089.2| GA18487 [Drosophila pseudoobscura pseudoobscura]
          Length = 412

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 189/288 (65%), Positives = 227/288 (78%), Gaps = 14/288 (4%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+ F P+KR++RHRGKVKAFPKDD SKP  LT F+GYKAGMTHIVR+ 
Sbjct: 1   MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVT++ETPP++VVG VGY++TP GLR+L  VWAQHL+EE RRRFYK
Sbjct: 61  DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTK +KK+  D GKK I+    KM +YC VIR              KKAH+
Sbjct: 121 NWYKSKKKAFTKTSKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGGS+  KV +A    EK I +  VF +DEMID +GVTKGKG++GV +RW   +L
Sbjct: 181 MEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLG 274
           PRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKKIY++G
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIG 288


>gi|380474654|emb|CCF45659.1| 60S ribosomal protein L3 [Colletotrichum higginsianum]
          Length = 391

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 186/302 (61%), Positives = 236/302 (78%), Gaps = 16/302 (5%)

Query: 12  GSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKE 71
           GSL +LPRKRA+RHRGKVK+FPKDD  KP  LTA +GYKAGMT IVRD+++PG+K +KKE
Sbjct: 12  GSLAYLPRKRAARHRGKVKSFPKDDAKKPVHLTAAMGYKAGMTTIVRDLDRPGAKANKKE 71

Query: 72  TCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFT 131
             EAV+II+TPP++VVG+VGY++TPRGLRSL TVWA+HL++E+RRRFYKNW KSKKKAFT
Sbjct: 72  VVEAVSIIDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEIRRRFYKNWYKSKKKAFT 131

Query: 132 KYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLMEIQVNGGSVA 177
           KY K++    G   I  ++E++KKYCTV+R              KKAHLMEIQVNGGS+A
Sbjct: 132 KYAKQHSESSG-ASITREIERIKKYCTVVRVLAHTQIRKTPLTQKKAHLMEIQVNGGSIA 190

Query: 178 QKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKV 237
            KVDF YG FEK + ID++F+++EMID+I VT G GY GV +RWG  +LPRKTH+GLRKV
Sbjct: 191 DKVDFGYGLFEKPVTIDSIFEQNEMIDVIAVTTGHGYNGVTSRWGTKKLPRKTHKGLRKV 250

Query: 238 ACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRSVYLLSSL 297
           ACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++GK   +  +A T+ D +   ++ L
Sbjct: 251 ACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKVYRIGKGDADD-NASTDVDVTKKTITPL 309

Query: 298 MG 299
            G
Sbjct: 310 GG 311


>gi|358443194|gb|AEU11843.1| control protein HCTL036 [Heliconius erato]
          Length = 392

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 193/311 (62%), Positives = 241/311 (77%), Gaps = 21/311 (6%)

Query: 11  HGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKK 70
           HGS+GF P+KR+ RHRGKVKAFPKDD SKP  LTAF+GYKAGMTH+VR+ ++PGSK++KK
Sbjct: 1   HGSMGFYPKKRSRRHRGKVKAFPKDDASKPVHLTAFIGYKAGMTHVVREPDRPGSKINKK 60

Query: 71  ETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAF 130
           E  EAVT+IETPP+V VGVVGY++TP GLR+L TVWA+H++E+ RRRFYKNW K KKKAF
Sbjct: 61  EIVEAVTVIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYKCKKKAF 120

Query: 131 TKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLMEIQVNGGSV 176
           TK +KK++ + G+K I+   +KM +YC+VIR              KKAH+MEIQVNGG++
Sbjct: 121 TKSSKKWQDELGRKSIEKDFKKMIRYCSVIRVIAHTQMKLLKQRQKKAHIMEIQVNGGNI 180

Query: 177 AQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRK 236
             KV +A    EK IP+D+VF +DEMID IGVTKGKGY+GV +RW   +LPRKTH+GLRK
Sbjct: 181 EDKVKWAREHLEKPIPVDSVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKLPRKTHKGLRK 240

Query: 237 VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------SHSAMTEFDRS 290
           VACIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G+           ++A TE+D S
Sbjct: 241 VACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGKVIKNNASTEYDLS 300

Query: 291 VYLLSSLMGSF 301
              ++  MG F
Sbjct: 301 EKSITP-MGGF 310


>gi|221116204|ref|XP_002167181.1| PREDICTED: 60S ribosomal protein L3-like [Hydra magnipapillata]
          Length = 403

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 190/321 (59%), Positives = 240/321 (74%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHG+LGFLPRKR+ +   ++K FPKDD +KPC LT F+G+KAGMTHIVR+V
Sbjct: 1   MSHRKFEAPRHGNLGFLPRKRSKKQLARMKTFPKDDETKPCHLTGFIGFKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++ GSK+HKKE  EAVTI+ETPP+V+VG+VGYV+TPRGLR L TVWA+HL++E +RRFYK
Sbjct: 61  DRVGSKVHKKEVVEAVTILETPPIVIVGIVGYVETPRGLRQLTTVWAEHLSDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSK KAFTK +KK+  ++GKK I+  LEKM KYC VIR              KKAH+
Sbjct: 121 NWYKSKHKAFTKSSKKWTDENGKKSIERDLEKMIKYCKVIRVLVHTQQRLVGLKQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG +  KV++A    EK I +  VF +DEMID IG+TKG G++GV  RWG  +L
Sbjct: 181 MEIQINGGKIVDKVNWAKNHLEKTISVSNVFGQDEMIDAIGITKGHGFKGVTYRWGTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVAC+GAWHPAR+ FTV RAGQ GYHHR E NKKIY++G+           
Sbjct: 241 PRKTHKGLRKVACVGAWHPARIGFTVPRAGQCGYHHRVERNKKIYRIGRGIHTKDNKVVK 300

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           ++A T++D +   ++  MG F
Sbjct: 301 NNASTDYDLTEKTITP-MGGF 320


>gi|428179797|gb|EKX48666.1| large subunit ribosomal protein L3e, cytoplasmic [Guillardia theta
           CCMP2712]
          Length = 401

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 205/322 (63%), Positives = 252/322 (78%), Gaps = 24/322 (7%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSLGF PRKR + HRG+V+ FP+DD SKPC LTAF+GYKAGMTHIVRDV
Sbjct: 1   MSHRKFERPRHGSLGFCPRKRCAHHRGRVRKFPRDDASKPCHLTAFMGYKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           +KPGSK HKKE+ EAVTI+E PP+VVVG+VGYVKTPRGLRSL TVWA+HL++E RRR YK
Sbjct: 61  DKPGSKQHKKESVEAVTILEAPPIVVVGIVGYVKTPRGLRSLTTVWAKHLSDEFRRRMYK 120

Query: 121 NWCKSK-KKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAH 165
           NW KSK KKAFTKYTK  E  +  K+   ++E++KKYC V+R              KKAH
Sbjct: 121 NWYKSKSKKAFTKYTK--EESERSKNSDKEIERIKKYCQVVRVIAHTQLSKVNIGQKKAH 178

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           +MEIQVNGG+   KVDFA   FE+Q+P+ +VF ++EMID+IGVTKG GY+GVV+RW VT+
Sbjct: 179 VMEIQVNGGTTKDKVDFATKLFEQQVPVKSVFSQNEMIDVIGVTKGHGYKGVVSRWHVTK 238

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ------E 279
           LPRKTHRGLRKV C+G+WHP+ V ++VARAGQ GY HRTE+NKKIY++G+A++      E
Sbjct: 239 LPRKTHRGLRKVGCVGSWHPSAVGWSVARAGQKGYFHRTELNKKIYRIGEAARKADGSIE 298

Query: 280 SHSAMTEFDRSVYLLSSLMGSF 301
             +A TEFD +   ++  MG F
Sbjct: 299 HKNATTEFDLTEKSITP-MGGF 319


>gi|170041842|ref|XP_001848658.1| 60S ribosomal protein L3 [Culex quinquefasciatus]
 gi|167865417|gb|EDS28800.1| 60S ribosomal protein L3 [Culex quinquefasciatus]
          Length = 452

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 190/321 (59%), Positives = 241/321 (75%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+ F P+KRASRH+G++KAFPKDDP+KP  LTA+L YKAGMTHIVR+ 
Sbjct: 38  MSHRKFSAPRHGSMAFYPKKRASRHQGRIKAFPKDDPTKPVHLTAYLAYKAGMTHIVREA 97

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+V+VG VGY++TP G R+LC VWAQHL+EE RRRFYK
Sbjct: 98  DRPGSKINKKEVVEAVTILETPPIVIVGAVGYIETPFGPRALCNVWAQHLSEECRRRFYK 157

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW  SKKKAFTK +KK+  D GKK I+   +KM +YC  IR              KKAH+
Sbjct: 158 NWHVSKKKAFTKASKKWTDDLGKKSIEDNFKKMIRYCKFIRVIAHSQIRLIKQGQKKAHI 217

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           +EIQ+NGG++  KV++     EK +P+  VF +DEM+D + VTKGKG++GV +RW   +L
Sbjct: 218 IEIQLNGGTIEDKVNWVKEHLEKPVPVADVFGQDEMVDCVAVTKGKGFKGVTSRWHTKKL 277

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHP+RV+FTVARAGQ GYHHRTE+NKKIY++G            
Sbjct: 278 PRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVVK 337

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           +SA TE+D +   ++  MG F
Sbjct: 338 NSAATEYDLTDKTITP-MGGF 357


>gi|209875731|ref|XP_002139308.1| 60S ribosomal protein L3 [Cryptosporidium muris RN66]
 gi|209554914|gb|EEA04959.1| 60S ribosomal protein L3, putative [Cryptosporidium muris RN66]
          Length = 390

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 195/315 (61%), Positives = 245/315 (77%), Gaps = 19/315 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PR GSLGFLPRKR SR+RGKVKAFPKDD ++P  LTAF+GYKAGMTHIVRDV
Sbjct: 1   MSHRKFERPRSGSLGFLPRKRCSRNRGKVKAFPKDDHTQPPHLTAFMGYKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           +KPGSKL+KKE  EAVTIIETPP++ VG VGY++TPRGL++L TV+A +L+EE +RRFY+
Sbjct: 61  DKPGSKLNKKEVVEAVTIIETPPMICVGFVGYIETPRGLKALTTVFAGYLSEECKRRFYR 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           N+ KSK+KAFTKY K Y  +   + ++ ++ + K+YCTVIR              KKA L
Sbjct: 121 NYYKSKRKAFTKYAKNYVEN---QRMEVEIARCKQYCTVIRALCHTQVSKTGLNKKKADL 177

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+V +KVDF    FE+QIPI ++F ++EMID+IG++KGKGY+GV++RWGVT+L
Sbjct: 178 MEIQVNGGTVTEKVDFCVRCFEQQIPISSIFSENEMIDVIGISKGKGYKGVISRWGVTKL 237

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKT RG+RKV+CIGAWHPARV F V RAGQ GY  RTEMNKKIY++G    +  +A T 
Sbjct: 238 PRKTRRGVRKVSCIGAWHPARVQFQVPRAGQKGYGQRTEMNKKIYRIGHGD-DPRNASTY 296

Query: 287 FDRSVYLLSSLMGSF 301
            D +   ++  MG F
Sbjct: 297 ADLTEKTITP-MGGF 310


>gi|148232513|ref|NP_001087574.1| MGC84749 protein [Xenopus laevis]
 gi|51261715|gb|AAH80121.1| MGC84749 protein [Xenopus laevis]
          Length = 420

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 191/292 (65%), Positives = 229/292 (78%), Gaps = 14/292 (4%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+GF P+KR+ R RGK KAFPKD  S P  LTAFLGYKAGMTH+VR+V
Sbjct: 1   MSHRKFSAPRHGSMGFTPKKRSRRIRGKCKAFPKDRRSLPPHLTAFLGYKAGMTHVVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  E VTI+E PP+V+VG+VGY  T RGLR+  TVWA+HL EE RRRFYK
Sbjct: 61  DRPGSKVHKREIVEPVTILECPPMVIVGMVGYAPTARGLRTFKTVWAEHLTEECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           +WCKSK+KAFTK +KK+  + G K+I   L K+KKYCTV+R              KKAH+
Sbjct: 121 DWCKSKRKAFTKASKKWADEAGLKEINRDLRKIKKYCTVVRAIAHTQMRLMKHRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+VAQKVD+    FEKQIP+  VF +DEMID+IGVTKGKG++GV +RW   +L
Sbjct: 181 MEIQVNGGTVAQKVDWIRQHFEKQIPVMNVFAQDEMIDVIGVTKGKGFKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ 278
           PRKTH+GLRKVACIG+WHPARV  TVARAGQ GY HRTE+NKKIY++G   Q
Sbjct: 241 PRKTHKGLRKVACIGSWHPARVGSTVARAGQKGYFHRTELNKKIYRIGLGLQ 292


>gi|291410164|ref|XP_002721356.1| PREDICTED: ribosomal protein L3-like isoform 1 [Oryctolagus
           cuniculus]
          Length = 400

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 195/319 (61%), Positives = 246/319 (77%), Gaps = 23/319 (7%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRK +S+HRGKV   PKDDPSKP  LTAFLGYKAG+THIV++V
Sbjct: 1   MSHRKFSVPRHGSLGFLPRKCSSQHRGKV---PKDDPSKPVHLTAFLGYKAGLTHIVQEV 57

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGS+++KKE  EAVTI+ETPP+VV+G+VGYV+TPRGLR+   ++A+H++++ +RRFYK
Sbjct: 58  DRPGSEVNKKEVVEAVTIVETPPMVVMGIVGYVETPRGLRTFKMMFAEHISDKCKRRFYK 117

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ D GK+ +      MKKYC VIR              KKAHL
Sbjct: 118 NWHKSKKKAFTKYCKKWQDDAGKRQLDKDFSSMKKYCQVIRVLAHTQMRLLPLWQKKAHL 177

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+VA+K+D+A    E+Q+P+  VF +DEMID+IGVTKGKGY+ V +RW   +L
Sbjct: 178 MEIQVNGGTVAEKLDWARERLEQQVPVSQVFGQDEMIDVIGVTKGKGYKAVTSRWHTKKL 237

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA------SQES 280
           P KTHRGLRKVACIGAWHPARV+F+VA AGQ GYHHRTE+NKKIYK+G+           
Sbjct: 238 PHKTHRGLRKVACIGAWHPARVAFSVAWAGQKGYHHRTEINKKIYKIGQGYLIKDRKLIK 297

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   ++ L G
Sbjct: 298 NNASTDYDLSDKSINPLGG 316


>gi|358443182|gb|AEU11837.1| control protein HCTL036 [Heliconius melpomene]
          Length = 392

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 192/311 (61%), Positives = 241/311 (77%), Gaps = 21/311 (6%)

Query: 11  HGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKK 70
           HGS+GF P+KR+ RHRGKVKAFPKDD SKP  LTAF+GYKAGMTH+VR+ ++PGSK++KK
Sbjct: 1   HGSMGFYPKKRSRRHRGKVKAFPKDDSSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKK 60

Query: 71  ETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAF 130
           E  EAVT+IETPP+V VGVVGY++TP GLR+L TVWA+H++E+ RRRFYKNW K KKKAF
Sbjct: 61  EIVEAVTVIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYKCKKKAF 120

Query: 131 TKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLMEIQVNGGSV 176
           TK +KK++ + G+K I+   +KM +YC+V+R              KKAH+MEIQVNGG++
Sbjct: 121 TKSSKKWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQVNGGNI 180

Query: 177 AQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRK 236
             KV +A    EK IP+D+VF +DEMID IGVTKGKGY+GV +RW   +LPRKTH+GLRK
Sbjct: 181 EDKVKWAREHLEKPIPVDSVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKLPRKTHKGLRK 240

Query: 237 VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------SHSAMTEFDRS 290
           VACIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G+           ++A TE+D S
Sbjct: 241 VACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGKVIKNNASTEYDLS 300

Query: 291 VYLLSSLMGSF 301
              ++  MG F
Sbjct: 301 EKSITP-MGGF 310


>gi|242017396|ref|XP_002429175.1| 60S ribosomal protein L3, putative [Pediculus humanus corporis]
 gi|212514053|gb|EEB16437.1| 60S ribosomal protein L3, putative [Pediculus humanus corporis]
          Length = 407

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 191/321 (59%), Positives = 243/321 (75%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+GF P+KR+ RHRGKVKAFP+DD SKP  LTAFLGYKAGMTH++R+ 
Sbjct: 1   MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPRDDRSKPVHLTAFLGYKAGMTHVLREA 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTIIETPP+++VG VGY++TP GLR+L TVWA+HL+E+ RRRFYK
Sbjct: 61  DRPGSKVNKKEIVEAVTIIETPPMIIVGAVGYIQTPHGLRALVTVWAEHLSEDCRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW +S++KAFTK +KK++ + G K I    +K+ KYC  +R              KKAH+
Sbjct: 121 NWYRSEQKAFTKASKKWQDELGVKSIDKSFKKIIKYCRCVRVIAHTQMKLLKQRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG++AQKV +     EK +P+  VF  DEMID IGVTKGKGY+GV +RW   +L
Sbjct: 181 MEIQLNGGNMAQKVKWIKEHLEKPVPVSQVFAPDEMIDCIGVTKGKGYKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYHHRTEMNKKIY++G+           
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEMNKKIYRIGQGIHYKDGKLVG 300

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           ++A T++D +   ++  MG F
Sbjct: 301 NNASTDYDLTEKSITP-MGGF 320


>gi|281204054|gb|EFA78250.1| 60S ribosomal protein L3 [Polysphondylium pallidum PN500]
          Length = 399

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 198/320 (61%), Positives = 242/320 (75%), Gaps = 22/320 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSLGFLPRKRA+RH+GK+K+FPKDD +KP  LTAF+GYKAGMTHIVRD+
Sbjct: 1   MSHRKFEAPRHGSLGFLPRKRAARHQGKIKSFPKDDRTKPVHLTAFMGYKAGMTHIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSK+HKKE  EAVTI+E PP+ +VG+VGY++T +GLR   TVWAQHL+ E RRRFYK
Sbjct: 61  EKPGSKMHKKEVVEAVTILECPPMYIVGLVGYLETAQGLRPYKTVWAQHLSNEFRRRFYK 120

Query: 121 NWCKSKKK-AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAH 165
            W KS     FTKYTKKYE D  KK I   +  +K+ CTVIR              KKA 
Sbjct: 121 QWYKSANHLVFTKYTKKYEND--KKSIDGAIAAIKRKCTVIRAIAHTQVHKLNLGQKKAE 178

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           ++EIQVNGGS+A KV++    FEK + +++VF ++EMIDIIGVTKGKG+ GV+ RWGV +
Sbjct: 179 VVEIQVNGGSIADKVNWVVENFEKTVTVESVFAENEMIDIIGVTKGKGFNGVIKRWGVRK 238

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAM- 284
           LPRKTH+GLRKVACIGAWHP+RVS  V RAGQ GYHHR E NKKIY++GKA   + +++ 
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSRVSTAVPRAGQLGYHHRVETNKKIYRIGKAQPATGTSIP 298

Query: 285 ---TEFDRSVYLLSSLMGSF 301
              TEFD +   ++  MG F
Sbjct: 299 TGATEFDITHKTITP-MGGF 317


>gi|448083090|ref|XP_004195305.1| Piso0_005857 [Millerozyma farinosa CBS 7064]
 gi|359376727|emb|CCE87309.1| Piso0_005857 [Millerozyma farinosa CBS 7064]
          Length = 389

 Score =  396 bits (1018), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 201/315 (63%), Positives = 248/315 (78%), Gaps = 18/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSLGFLPRKRA++ RG+VK+FPKD  SKP  LTAFLGYKAGMT IVRD+
Sbjct: 1   MSHRKYEAPRHGSLGFLPRKRAAKQRGRVKSFPKDVKSKPVSLTAFLGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  EA T+++TPPLVVVGVVGYV+TPRGLRSL TVWA+HL+EEV+RRFYK
Sbjct: 61  DRPGSKVHKREIVEAATVVDTPPLVVVGVVGYVETPRGLRSLTTVWAEHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY+ KY  D  +  ++ +L ++KKY +V+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDATQ--VERELARIKKYASVVRVLVHTQIKKTPLSQKKAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQVNGGS++ KVD+A   FEK + +D+VF+++EMID I VTKG G+EGV  RWG  +L
Sbjct: 179 AEIQVNGGSISDKVDWAKEHFEKTVSVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPA V ++V RAGQNGYHHRT +N K+Y++G    ES+ A TE
Sbjct: 239 PRKTHRGLRKVACIGAWHPANVQWSVPRAGQNGYHHRTSINHKVYRVGSGEDESNGA-TE 297

Query: 287 FDRSVYLLSSLMGSF 301
           FDR+   ++  MG F
Sbjct: 298 FDRTKKTINP-MGGF 311


>gi|298705189|emb|CBJ28620.1| Ribosomal protein L3 [Ectocarpus siliculosus]
          Length = 423

 Score =  396 bits (1018), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 203/313 (64%), Positives = 250/313 (79%), Gaps = 17/313 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PR+GSLGFLP+KR  +HRG +++FPKDD +K   LTAF+ YKAGMTHI R+V
Sbjct: 34  MSHRKFEAPRNGSLGFLPKKRTKKHRGHIRSFPKDDAAKEPHLTAFMAYKAGMTHIAREV 93

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HKKE  EAVTI+ETPP+VVVGVVGYV+TP+GLR+L TVWA HL++E +RRFYK
Sbjct: 94  DRPGSKVHKKEVVEAVTILETPPIVVVGVVGYVETPKGLRTLTTVWAGHLSDECKRRFYK 153

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           +W  SKKKAFT+Y KK+   D  ++I A+L ++K+Y  V+R              KKAH+
Sbjct: 154 HWYTSKKKAFTRYAKKFA--DAPQEIDAELGRIKQYAQVVRVIAHTQVGLVKLRQKKAHI 211

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQVNGG VA KVDFA G FE+++P+DAVF KDE ID++G +KG G EGVVTRWGVTRL
Sbjct: 212 CEIQVNGGDVAAKVDFARGLFEQKVPVDAVFAKDECIDVLGASKGHGTEGVVTRWGVTRL 271

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPARVSF+VARAGQ+GYHHRTE+NKKIY++GK    + SA TE
Sbjct: 272 PRKTHRGLRKVACIGAWHPARVSFSVARAGQHGYHHRTELNKKIYRIGKKGDVA-SASTE 330

Query: 287 FDRSVYLLSSLMG 299
            D +V  ++ L G
Sbjct: 331 ADLTVKHITPLGG 343


>gi|48597014|ref|NP_001001590.1| 60S ribosomal protein L3 [Danio rerio]
 gi|45504885|gb|AAS66967.1| ribosomal protein L3 [Danio rerio]
          Length = 403

 Score =  396 bits (1018), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 200/319 (62%), Positives = 247/319 (77%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  P HGSLGFLPRKR  RHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPLHGSLGFLPRKRCKRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVT++ETPP++VVGVVGYV TPRGLRS  T++A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTVVETPPMIVVGVVGYVMTPRGLRSFKTIFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY K+++ ++GKK ++     MKKYC +IR              KK+HL
Sbjct: 121 NWYKSKKKAFTKYCKRWQDEEGKKQLEKDFSSMKKYCQIIRIIAHTQMRLLPHRQKKSHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG+++ KVD+A    E+ IPI  VF +DEMID+IGVTKG G +GV +RW   +L
Sbjct: 181 MEIQLNGGTISDKVDWAREKLEQSIPIANVFSQDEMIDVIGVTKGHGCKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G            
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGVGYHNKDGKLVK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   ++ L G
Sbjct: 301 NNASTDYDLSNKSINPLGG 319


>gi|195453495|ref|XP_002073813.1| GK14309 [Drosophila willistoni]
 gi|194169898|gb|EDW84799.1| GK14309 [Drosophila willistoni]
          Length = 414

 Score =  396 bits (1018), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 194/321 (60%), Positives = 238/321 (74%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+ F P+KR+ RHRGKVKAFPKDD SKP  LT F+GYKAGMTHIVR+ 
Sbjct: 1   MSHRKFSAPRHGSMAFYPKKRSCRHRGKVKAFPKDDASKPVHLTCFVGYKAGMTHIVREA 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVT++ETPP++VVG VGY++TP GLR+L  VWAQHL+EE RRRFYK
Sbjct: 61  DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTK +KK+  D GKK I+    KM +YC VIR              KKAH+
Sbjct: 121 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGGS+  KV +     EK I +  VF +DEM+D +GVTKGKG++GV +RW   +L
Sbjct: 181 MEIQLNGGSIEDKVKWVREHLEKPIQVSNVFGQDEMVDCVGVTKGKGFKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKKIY++G            
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIK 300

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           ++A TE+D +   ++  MG F
Sbjct: 301 NNASTEYDLTDKSITP-MGGF 320


>gi|393215986|gb|EJD01477.1| 60S ribosomal protein L3 [Fomitiporia mediterranea MF3/22]
          Length = 388

 Score =  396 bits (1017), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 203/315 (64%), Positives = 258/315 (81%), Gaps = 17/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSLGFLPRKRA+RHRGKVK+FPKDDP KP  LTA +GYKAGMTH+VRD+
Sbjct: 1   MSHRKYEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAIMGYKAGMTHVVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++K+E  EAVT++ETPP++VVGVVGYV+TPRGLR+L TVWA HL++E++RRFYK
Sbjct: 61  DRPGSKMNKREVVEAVTVVETPPMMVVGVVGYVETPRGLRTLTTVWASHLSDELKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW +SKKKAFT+Y KK   +DG K +  +LE+++KYCTV+R              KKAHL
Sbjct: 121 NWYRSKKKAFTRYAKK-AAEDGGKSVARELERIRKYCTVVRVLAHTQIRQTGLKQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGSVA KV+FA+G FEK + + ++F++DE+ID+I VTKG G+EGV  RWG  +L
Sbjct: 180 MEIQVNGGSVADKVEFAHGLFEKPVDVSSIFEQDEVIDVIAVTKGHGFEGVTHRWGTKKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE+NKKIY++GK   E+ +A T+
Sbjct: 240 PRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTELNKKIYRVGKGDDEN-NATTD 298

Query: 287 FDRSVYLLSSLMGSF 301
            D +   ++  MG F
Sbjct: 299 ADATKKQITP-MGGF 312


>gi|421975946|gb|AFX73005.1| ribosomal protein L3 [Spirometra erinaceieuropaei]
          Length = 420

 Score =  395 bits (1016), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 189/292 (64%), Positives = 231/292 (79%), Gaps = 14/292 (4%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSH KF  PRHGSLGF P+KR+ R RGK KAFPKD  S P  LTAF+G+KAGMTH+VRDV
Sbjct: 1   MSHGKFSAPRHGSLGFTPKKRSRRIRGKCKAFPKDRRSAPPHLTAFMGFKAGMTHVVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HKKE  E VTI+E PP+V+VG+VGY++T +GLR+  T+WA+HL+EE RRRFYK
Sbjct: 61  DRPGSKVHKKEIVEPVTILECPPMVIVGIVGYIQTAKGLRTFKTIWAEHLSEECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           ++CKSK+KAFTK +KK+  + G   I   L+KMKKYCTVIR              KKAH+
Sbjct: 121 DFCKSKRKAFTKASKKWADEAGLAAINRDLKKMKKYCTVIRVIVHTQMRLMKHRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+V+QKVD+A    EKQIP+  VF +DEMID+IGVTKGKG++GV +RW   +L
Sbjct: 181 MEIQVNGGTVSQKVDWARSHLEKQIPVANVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ 278
           PRKTH+GLRKVACIGAWHPARV+ +VARAGQ GY HRTEMNKKIY++G   Q
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVARSVARAGQKGYFHRTEMNKKIYRIGLGIQ 292


>gi|384491983|gb|EIE83179.1| 60S ribosomal protein L3 [Rhizopus delemar RA 99-880]
          Length = 387

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 199/315 (63%), Positives = 247/315 (78%), Gaps = 18/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHG LGF PRKR   HRG+VKA+PKDD  KP  LTAF+GYKAGMTHIVRD+
Sbjct: 1   MSHRKYEAPRHGHLGFGPRKRTRSHRGRVKAYPKDDAKKPVHLTAFMGYKAGMTHIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           E+PGSK+HKKE  EAVT+IE P +VVVGVVGYV+TPRGLRSL TVWA+HL+EE +RRFYK
Sbjct: 61  ERPGSKMHKKEIVEAVTVIEAPAMVVVGVVGYVETPRGLRSLTTVWAEHLSEEAKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW +SKKKAFTKY +KY   +G KD+  +LE++KKYC+V+R              +KAH+
Sbjct: 121 NWYRSKKKAFTKYAQKYA--EGAKDVTRELERIKKYCSVVRVIAHTQISKAKLHQRKAHI 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGGSV QKVD+A   FEK++ + ++F++DEMIDII  TKG G+EGV  RWG  +L
Sbjct: 179 MEIQLNGGSVEQKVDWAREHFEKEVTVGSIFEQDEMIDIIATTKGHGFEGVTHRWGTKKL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHP+RV ++VARAGQ GYH RTE+NKKIY++   + ++ S  TE
Sbjct: 239 PRKTHRGLRKVACIGAWHPSRVMYSVARAGQRGYHRRTEINKKIYRIATGA-DAKSGTTE 297

Query: 287 FDRSVYLLSSLMGSF 301
           +D +   ++  MG F
Sbjct: 298 YDLTEKQITP-MGGF 311


>gi|357623605|gb|EHJ74691.1| ribosomal protein L3 [Danaus plexippus]
          Length = 399

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 193/308 (62%), Positives = 239/308 (77%), Gaps = 21/308 (6%)

Query: 14  LGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 73
           +GF P+KR+ RHRGKVKAFPKDD SKP  LTAF+GYKAGMTH+VR+ ++PGSK++KKE  
Sbjct: 1   MGFYPKKRSRRHRGKVKAFPKDDASKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 60

Query: 74  EAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKY 133
           EAVTIIETPP+V VGVVGY++TP GLR+L TVWA+H++E+ RRRFYKNW K KKKAFTK 
Sbjct: 61  EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYKCKKKAFTKS 120

Query: 134 TKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLMEIQVNGGSVAQK 179
           +KK++ + G+K I+   +KM +YC+VIR              KKAH+MEIQVNGGS+  K
Sbjct: 121 SKKWQDELGRKSIEKDFKKMIRYCSVIRVIAHTQMKLLKQRQKKAHIMEIQVNGGSIEDK 180

Query: 180 VDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVAC 239
           V++A    EK IPID+VF +DEMID IGVTKGKGY+GV +RW   +LPRKTH+GLRKVAC
Sbjct: 181 VNWAREHLEKPIPIDSVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKLPRKTHKGLRKVAC 240

Query: 240 IGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------SHSAMTEFDRSVYL 293
           IGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G+           ++A TE+D S   
Sbjct: 241 IGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGKVIKNNASTEYDLSEKS 300

Query: 294 LSSLMGSF 301
           ++  MG F
Sbjct: 301 ITP-MGGF 307


>gi|289743297|gb|ADD20396.1| ribosomal protein L3 [Glossina morsitans morsitans]
          Length = 413

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 193/321 (60%), Positives = 238/321 (74%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+ F P+KR+ RHRGKVKAFPKDD SKP  LT F+GYKAGM+HIVR+ 
Sbjct: 1   MSHRKFSAPRHGSMAFYPKKRSRRHRGKVKAFPKDDASKPVHLTCFIGYKAGMSHIVREA 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVT++ETPP++VVG VGY++TP GLR+L  VWAQHL+EE RRRFYK
Sbjct: 61  DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KS+KKAFTK +KK+  D GKK I+    KM +YC VIR              KKAH+
Sbjct: 121 NWYKSQKKAFTKASKKWGDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGGS+  KV +     EK + +  VF +DEMID IGVTKGKG++GV +RW   +L
Sbjct: 181 MEIQLNGGSIEDKVKWVREHLEKPVAVSNVFGQDEMIDCIGVTKGKGFKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKKIY++G            
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIK 300

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           ++A TE+D +   ++  MG F
Sbjct: 301 NNASTEYDLTDKSITP-MGGF 320


>gi|406701331|gb|EKD04480.1| large subunit ribosomal protein L3 [Trichosporon asahii var. asahii
           CBS 8904]
          Length = 388

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 191/302 (63%), Positives = 242/302 (80%), Gaps = 16/302 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PR GSL FLPRKRA++HRG +K+FPKDDP KP  LTA LGYKAGMTH+VRD+
Sbjct: 1   MSHRKYEEPRSGSLAFLPRKRAAKHRGHIKSFPKDDPKKPVHLTAMLGYKAGMTHVVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  EAVT++ETPP+V+VGVVGYV+TPRGLR+L TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGSKMHKREVVEAVTVVETPPMVIVGVVGYVETPRGLRALTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW +SKKKAFT+Y KK+  ++G   +  +LE++KKY TV+R              KKAHL
Sbjct: 121 NWYRSKKKAFTRYAKKHSENNG-ASVARELERIKKYATVVRVLAHTQLSQTGLAQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQVNGGS+A KV+FA   FEK   + +VF+++E ID+I VTKG GY GV++RWGVT+L
Sbjct: 180 SEIQVNGGSIADKVEFAKANFEKTFDVKSVFEQNECIDVIAVTKGHGYSGVISRWGVTKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHP++V F+VAR+GQ+GYH RT +N KIY++   + E  S  TE
Sbjct: 240 PRKTHRGLRKVACIGAWHPSKVMFSVARSGQDGYHRRTTINHKIYRIDNGTNEG-SGSTE 298

Query: 287 FD 288
           FD
Sbjct: 299 FD 300


>gi|401882459|gb|EJT46717.1| large subunit ribosomal protein L3 [Trichosporon asahii var. asahii
           CBS 2479]
          Length = 381

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 191/302 (63%), Positives = 242/302 (80%), Gaps = 16/302 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PR GSL FLPRKRA++HRG +K+FPKDDP KP  LTA LGYKAGMTH+VRD+
Sbjct: 1   MSHRKYEEPRSGSLAFLPRKRAAKHRGHIKSFPKDDPKKPVHLTAMLGYKAGMTHVVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  EAVT++ETPP+V+VGVVGYV+TPRGLR+L TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGSKMHKREVVEAVTVVETPPMVIVGVVGYVETPRGLRALTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW +SKKKAFT+Y KK+  ++G   +  +LE++KKY TV+R              KKAHL
Sbjct: 121 NWYRSKKKAFTRYAKKHSENNG-ASVARELERIKKYATVVRVLAHTQLSQTGLAQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQVNGGS+A KV+FA   FEK   + +VF+++E ID+I VTKG GY GV++RWGVT+L
Sbjct: 180 SEIQVNGGSIADKVEFAKANFEKTFDVKSVFEQNECIDVIAVTKGHGYSGVISRWGVTKL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHP++V F+VAR+GQ+GYH RT +N KIY++   + E  S  TE
Sbjct: 240 PRKTHRGLRKVACIGAWHPSKVMFSVARSGQDGYHRRTTINHKIYRIDNGTNEG-SGSTE 298

Query: 287 FD 288
           FD
Sbjct: 299 FD 300


>gi|320583084|gb|EFW97300.1| 60S ribosomal protein L3 [Ogataea parapolymorpha DL-1]
          Length = 389

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 201/315 (63%), Positives = 248/315 (78%), Gaps = 18/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSLGFLPRKRA + RG+ KAFPKD  SKP  LTAFLGYKAGMT IVRD+
Sbjct: 1   MSHRKFEQPRHGSLGFLPRKRAVKQRGRCKAFPKDVKSKPVALTAFLGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  EA T+++TP LVVVGVVGYV+TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGSKMHKREIVEAATVVDTPELVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKK+AFTKY++KY   +   +I+ +L ++KKYC+V+R              KKAHL
Sbjct: 121 NWYKSKKRAFTKYSEKYA--NSAAEIEKELARIKKYCSVVRVLVHTQIRKTPLTQKKAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQVNGGSV+ KVD+A   FEK + +D+VF+++EMID+I VTKG G+EGV  RWG  +L
Sbjct: 179 AEIQVNGGSVSDKVDWAKEHFEKTVSVDSVFEQNEMIDVIAVTKGHGFEGVTHRWGTKKL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRG RKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++GKA  E+ S  TE
Sbjct: 239 PRKTHRGTRKVACIGAWHPSHVMWTVARAGQRGYHHRTSINHKVYRIGKAGDEA-SGATE 297

Query: 287 FDRSVYLLSSLMGSF 301
           FDR+   ++  MG F
Sbjct: 298 FDRTKKTITP-MGGF 311


>gi|385305996|gb|EIF49936.1| 60s ribosomal protein l3 [Dekkera bruxellensis AWRI1499]
          Length = 389

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 195/313 (62%), Positives = 246/313 (78%), Gaps = 17/313 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKRAS+ RG ++AFPKDD +KP  LTAFLGYKAGMT IVRD+
Sbjct: 1   MSHRKFSEPRHGSLGFLPRKRASQQRGHIRAFPKDDKTKPVHLTAFLGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
            +PGS +HK+E  EA T+++TP LVVVGVVGYV+TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  NRPGSNVHKREIVEAATVVDTPELVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKK+AF KY++KY   +G  DI+ +L ++KKYC+V+R              KKAHL
Sbjct: 121 NWYKSKKRAFAKYSEKYA--NGAADIETELARVKKYCSVVRVLVHTQIRKTPLSQKKAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQ+NGGSV+ KVD+A   FEK +P+D VF++DE +D+I VT+G GYEGV  R+G T+L
Sbjct: 179 AEIQLNGGSVSDKVDWAKEHFEKTVPVDTVFEQDESVDVIAVTRGHGYEGVTHRYGTTKL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRG RKVACIG WHP+ V++ VAR+GQNGYHHRT +N K+Y++GKA  E+ S  T+
Sbjct: 239 PRKTHRGARKVACIGPWHPSHVNWAVARSGQNGYHHRTSVNNKVYRVGKAGDEA-SGSTD 297

Query: 287 FDRSVYLLSSLMG 299
           FDR+   ++ L G
Sbjct: 298 FDRTKKTINPLGG 310


>gi|323510289|dbj|BAJ78038.1| cgd5_1580 [Cryptosporidium parvum]
          Length = 388

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 190/315 (60%), Positives = 243/315 (77%), Gaps = 19/315 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PR GSLGFLPRKR SR+RGKVKAFPKDD ++P  LTAF+GYKAGMTHIVRDV
Sbjct: 1   MSHRKFERPRSGSLGFLPRKRCSRNRGKVKAFPKDDSNQPPHLTAFMGYKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           +KPGSKL+KKE  EAVTI+ETPP++ VG VGY++TP GLR+L TV+A +L+EE +RRFYK
Sbjct: 61  DKPGSKLNKKEVVEAVTIVETPPMICVGFVGYIETPNGLRALTTVFAGYLSEECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           N+ +SK+KAFTKY + Y  +   + ++A++ + K+YCTVIR              KKA +
Sbjct: 121 NYYRSKRKAFTKYARNYAEN---QRMEAEIARCKQYCTVIRALCHTQVSKTGLNKKKADI 177

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+V+ K+DF    FE+ IP+  +F ++EMIDIIG++KGKGY+GV++RWGVT+L
Sbjct: 178 MEIQVNGGTVSDKIDFCVRCFEQPIPVSTIFNENEMIDIIGISKGKGYKGVISRWGVTKL 237

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKT RG+RKV+CIGAWHPARV F V RAGQ GY  RTE NKKIY++G+   +  +A T 
Sbjct: 238 PRKTRRGVRKVSCIGAWHPARVQFQVPRAGQKGYGQRTETNKKIYRIGRG-DDPRNASTS 296

Query: 287 FDRSVYLLSSLMGSF 301
            D +   ++  MG F
Sbjct: 297 ADLTEKTITP-MGGF 310


>gi|367005320|ref|XP_003687392.1| 60S ribosomal protein L3 [Tetrapisispora phaffii CBS 4417]
 gi|357525696|emb|CCE64958.1| hypothetical protein TPHA_0J01360 [Tetrapisispora phaffii CBS 4417]
          Length = 387

 Score =  393 bits (1010), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 200/315 (63%), Positives = 248/315 (78%), Gaps = 18/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHG LGFLPRKRA+  RGKV+AFPKDD SKP  LT+FLGYKAGMT IVRD+
Sbjct: 1   MSHRKYEAPRHGHLGFLPRKRAASVRGKVRAFPKDDKSKPVALTSFLGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK HK+E  EAVT+++TP +VVVGVVGYV+TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGSKFHKREIVEAVTVVDTPEIVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY+ KY  +     I+ +L ++KKY +V+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYSAKYAQEGA--GIERELARIKKYASVVRVLVHTQVRKTPLVQKKAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQ+NGGS+++KVD+A   FEK + +D+VF+++EMID++ VTKG G+EGV  RWG  RL
Sbjct: 179 AEIQLNGGSISEKVDWAREHFEKTVAVDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKRL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIG WHPA V ++VARAGQNGYHHRT +N KIY++GKA  E+ SA T 
Sbjct: 239 PRKTHRGLRKVACIGPWHPAHVMWSVARAGQNGYHHRTSINHKIYRVGKAGDEA-SAATN 297

Query: 287 FDRSVYLLSSLMGSF 301
           FDR+   ++  MG F
Sbjct: 298 FDRTKKTINP-MGGF 311


>gi|195389887|ref|XP_002053605.1| GJ23255 [Drosophila virilis]
 gi|194151691|gb|EDW67125.1| GJ23255 [Drosophila virilis]
          Length = 415

 Score =  393 bits (1009), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 193/321 (60%), Positives = 237/321 (73%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+ F P+KR+ RHRGKVKAFPKDD +KP  LT F+GYKAGMTHIVR+ 
Sbjct: 1   MSHRKFSAPRHGSMAFYPKKRSCRHRGKVKAFPKDDATKPVHLTCFIGYKAGMTHIVREA 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP++ VG VGY++TP GLR+L  VWAQHL+EE RRRFYK
Sbjct: 61  DRPGSKINKKEVVEAVTILETPPMIAVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KS+KKAFTK +KK+  D GKK I+    KM +YC VIR              KKAH+
Sbjct: 121 NWYKSQKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLINQRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGGS+  KV +     EK I +  VF +DEMID +GVTKGKG++GV +RW   +L
Sbjct: 181 MEIQLNGGSIEDKVKWVREHLEKPIQVRNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKKIY++G            
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIYTKDGKVIK 300

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           ++A TE+D +   ++  MG F
Sbjct: 301 NNASTEYDLTDKSITP-MGGF 320


>gi|226475914|emb|CAX72047.1| ribosomal protein L3 [Schistosoma japonicum]
          Length = 419

 Score =  393 bits (1009), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 193/321 (60%), Positives = 239/321 (74%), Gaps = 18/321 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGF P+KR  R RGK KAFP+D  S P  LTAF+GYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFTPKKRCRRIRGKCKAFPRDRRSLPPHLTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  E VTI+E PP+V+VG+VGY  T RGLR+  TVWA+HL EE RRRFYK
Sbjct: 61  DRPGSKVHKREVVEPVTIMECPPMVIVGMVGYAPTARGLRTFKTVWAEHLTEECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           +WCKSKKKAFTK ++K+  + G   I   L+K+KKYCTV+R              KKAH+
Sbjct: 121 DWCKSKKKAFTKASRKWADEAGLALINRDLKKIKKYCTVVRAIAHTQMRLMKHRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+++QKVD+    FEKQIP+  VF +DEMID+IGVTKGKG++GV +RW   +L
Sbjct: 181 MEIQVNGGTISQKVDWIRQHFEKQIPVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE----SHS 282
           PRKTH+GLRKVACIGAWHPARV+ +VARAGQ GY HRTE+NKKIY++G   Q     + +
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVARSVARAGQKGYFHRTELNKKIYRIGMGLQAQLEVAKA 300

Query: 283 AMTEFDRSVYLLSSLMGSFSS 303
              + DR   +L    G+ S+
Sbjct: 301 EAAKDDRDKNVLPKPKGNAST 321


>gi|195055484|ref|XP_001994649.1| GH14923 [Drosophila grimshawi]
 gi|193892412|gb|EDV91278.1| GH14923 [Drosophila grimshawi]
          Length = 417

 Score =  393 bits (1009), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 191/321 (59%), Positives = 237/321 (73%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+ F P+KR+ RHRGKVKA+PKDD SKP  LT F+GYKAGMTH+VR+ 
Sbjct: 1   MSHRKFSAPRHGSMAFYPKKRSCRHRGKVKAYPKDDASKPVHLTCFIGYKAGMTHVVREA 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVT++ETPP++ VG VGY++TP GLR+L  VWAQHL+EE RRRFYK
Sbjct: 61  DRPGSKINKKEVVEAVTVLETPPMIAVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KS+KKAFTK +KK+  D GKK I+    KM +YC VIR              KKAH+
Sbjct: 121 NWFKSQKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGGSV  KV +     EK I +  VF +DEM+D +GVTKGKG++GV +RW   +L
Sbjct: 181 MEIQLNGGSVEDKVKWVREHLEKPIQVSKVFGQDEMVDCVGVTKGKGFKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKKIY++G            
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGVHTKDGKVIK 300

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           ++A TE+D +   ++  MG F
Sbjct: 301 NNASTEYDLTDKSITP-MGGF 320


>gi|195107417|ref|XP_001998310.1| GI23698 [Drosophila mojavensis]
 gi|193914904|gb|EDW13771.1| GI23698 [Drosophila mojavensis]
          Length = 415

 Score =  392 bits (1008), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 195/322 (60%), Positives = 241/322 (74%), Gaps = 22/322 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+ F P+KR+SRHRGKVKAFPKDD +KP  LT F+GYKAGMTHIVR+ 
Sbjct: 1   MSHRKFSAPRHGSMAFYPKKRSSRHRGKVKAFPKDDATKPVHLTCFIGYKAGMTHIVREA 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP++ VG VGY++TP GLR+L  VWAQHL+EE RRRFYK
Sbjct: 61  DRPGSKINKKEVVEAVTILETPPMIAVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120

Query: 121 NWCKS-KKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAH 165
           NW KS KKKAFTK +KK+  D GKK I+    KM +YC VIR              KKAH
Sbjct: 121 NWYKSEKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           +MEIQ+NGGS+  KV +     EK I +  VF +DEM+D +GVTKGKG++GV +RW   +
Sbjct: 181 IMEIQLNGGSIEDKVKWVREHLEKPIQVSNVFGQDEMVDCVGVTKGKGFKGVTSRWHTKK 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA--SQES--- 280
           LPRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKKIY++G    +Q+    
Sbjct: 241 LPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTQDGKVI 300

Query: 281 -HSAMTEFDRSVYLLSSLMGSF 301
            ++A TE+D +   ++  MG F
Sbjct: 301 KNNASTEYDLTDKSITP-MGGF 321


>gi|367010196|ref|XP_003679599.1| 60S ribosomal protein L3 [Torulaspora delbrueckii]
 gi|359747257|emb|CCE90388.1| hypothetical protein TDEL_0B02590 [Torulaspora delbrueckii]
          Length = 387

 Score =  392 bits (1008), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 197/315 (62%), Positives = 248/315 (78%), Gaps = 18/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHG LGFLPRKRA+  RG+VK+FPKDD SKP  LT+FLGYKAGMT IVRD+
Sbjct: 1   MSHRKYEAPRHGHLGFLPRKRAASIRGRVKSFPKDDKSKPVALTSFLGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK HK+E  EAV++++TPP+VVVGVVGYV+TPRGLRSL TVWA+HL++E++RRFYK
Sbjct: 61  DRPGSKFHKREIVEAVSVVDTPPIVVVGVVGYVETPRGLRSLTTVWAEHLSDEIKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY+ KY  D     ++ +L ++KKY TV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYSGKYAQDGAL--VERELARIKKYATVVRVLAHTQVRKTPLSQKKAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQ+NGGS+++KVD+A   FEK + +D+VF+++EMID++ VTKG G+EGV  RWG  RL
Sbjct: 179 AEIQLNGGSISEKVDWAREHFEKTVAVDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKRL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPA V ++VARAGQ GYHHRT +N K+Y++GK   ES +A T 
Sbjct: 239 PRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHHRTSINHKVYRVGKGEDES-NASTN 297

Query: 287 FDRSVYLLSSLMGSF 301
           FDR+   ++  MG F
Sbjct: 298 FDRTKKTITP-MGGF 311


>gi|328876376|gb|EGG24739.1| 60S ribosomal protein L3 [Dictyostelium fasciculatum]
          Length = 455

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 197/321 (61%), Positives = 242/321 (75%), Gaps = 23/321 (7%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSLGFLPRK+A+R  G VK+FPKDD SKP  LTAF+GYKAGMTHIVRD+
Sbjct: 1   MSHRKFEAPRHGSLGFLPRKKANRLLGHVKSFPKDDRSKPVHLTAFIGYKAGMTHIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EK GSK+HKKE  EAVTIIETPP+VVVG+VGY +T +GLR+  TVWAQHL+ E RR FYK
Sbjct: 61  EKLGSKMHKKEIVEAVTIIETPPMVVVGLVGYTETLKGLRAYKTVWAQHLSNEFRRHFYK 120

Query: 121 NWCKSKKK-AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKA 164
           +WCKSK K AFTKY+KK+E  +G   I   +E +K+ C +IR               KKA
Sbjct: 121 SWCKSKNKLAFTKYSKKFE--EGTIKISNAVEAIKRKCAIIRVIAHSQPAKVAALHQKKA 178

Query: 165 HLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 224
           H++EIQ+NGGS+A K+ +A   FEK I I++VF ++EM+D+I VTKGKG++GVV RWGV 
Sbjct: 179 HMLEIQLNGGSIADKLKWAVDMFEKTISIESVFAENEMLDVISVTKGKGFQGVVKRWGVK 238

Query: 225 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESH--- 281
           +LPRKTH+GLRKVACIGAWHP+RVS TV RAGQ G+ HR E NKKIY++GKA   +    
Sbjct: 239 KLPRKTHKGLRKVACIGAWHPSRVSTTVPRAGQMGFFHRVETNKKIYRIGKAQPTTGPKI 298

Query: 282 -SAMTEFDRSVYLLSSLMGSF 301
            +  TEFD +   ++  MG F
Sbjct: 299 PTGATEFDITAKTITP-MGGF 318


>gi|226475916|emb|CAX72048.1| ribosomal protein L3 [Schistosoma japonicum]
          Length = 419

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 192/321 (59%), Positives = 239/321 (74%), Gaps = 18/321 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGF P+KR  R RGK KAFP+D  S P  LTAF+GYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFTPKKRCRRIRGKCKAFPRDRRSLPPHLTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  E VTI+E PP+V+VG+VGY  T +GLR+  TVWA+HL EE RRRFYK
Sbjct: 61  DRPGSKVHKREVVEPVTIMECPPMVIVGMVGYAPTAKGLRTFKTVWAEHLTEECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           +WCKSKKKAFTK ++K+  + G   I   L+K+KKYCTV+R              KKAH+
Sbjct: 121 DWCKSKKKAFTKASRKWADEAGLALINRDLKKIKKYCTVVRAIAHIQMRLMKHRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+++QKVD+    FEKQIP+  VF +DEMID+IGVTKGKG++GV +RW   +L
Sbjct: 181 MEIQVNGGTISQKVDWIRQHFEKQIPVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE----SHS 282
           PRKTH+GLRKVACIGAWHPARV+ +VARAGQ GY HRTE+NKKIY++G   Q     + +
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVARSVARAGQKGYFHRTELNKKIYRIGMGLQAQLEVAKA 300

Query: 283 AMTEFDRSVYLLSSLMGSFSS 303
              + DR   +L    G+ S+
Sbjct: 301 EAAKDDRDKNVLPKPKGNAST 321


>gi|375332089|gb|AFA52584.1| ribosomal protein L3 superfamily protein [Vaucheria litorea]
          Length = 395

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 199/315 (63%), Positives = 245/315 (77%), Gaps = 18/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PR GSLGFLP+KR  +H GK+++FP DDPSK C LTAF+ YKAGMTHIVR+V
Sbjct: 1   MSHRKFEAPRKGSLGFLPKKRTKKHFGKIRSFPHDDPSKECHLTAFMAYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           E+PGSKLHKKET E VTI+E PP+VVVGVVGY +TP GL+++ +VWA HL++E RRR YK
Sbjct: 61  ERPGSKLHKKETVEPVTILECPPMVVVGVVGYKETPNGLKTVVSVWAGHLSDECRRRMYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW  SKKKAFT Y KK+   +  ++I+  L+K+KK+C V+R              KKAH+
Sbjct: 121 NWHSSKKKAFTAYAKKFA--EKPEEIERDLKKIKKHCQVVRVIAHTQVGLVKLRVKKAHI 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+V +KVDFA G FE+ +PI +VF KDE ID++G TKG G +GVV RWGVTRL
Sbjct: 179 MEIQVNGGTVEEKVDFAKGLFERHVPISSVFSKDECIDVLGATKGHGTKGVVARWGVTRL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
            RKTHRGLRKVACIG+WHPARV+F+VARAGQ+GYHHRTE+NKKIY++G+   E  S  TE
Sbjct: 239 ARKTHRGLRKVACIGSWHPARVAFSVARAGQHGYHHRTEINKKIYRIGQKGDEG-SCTTE 297

Query: 287 FDRSVYLLSSLMGSF 301
            D +V  ++  MG F
Sbjct: 298 ADLTVKSITP-MGGF 311


>gi|29841161|gb|AAP06174.1| SJCHGC06297 protein [Schistosoma japonicum]
 gi|226475918|emb|CAX72049.1| ribosomal protein L3 [Schistosoma japonicum]
 gi|226475924|emb|CAX72052.1| ribosomal protein L3 [Schistosoma japonicum]
 gi|226475926|emb|CAX72053.1| ribosomal protein L3 [Schistosoma japonicum]
 gi|226475928|emb|CAX72054.1| ribosomal protein L3 [Schistosoma japonicum]
 gi|226480226|emb|CAX78777.1| ribosomal protein L3 [Schistosoma japonicum]
 gi|226480228|emb|CAX78778.1| ribosomal protein L3 [Schistosoma japonicum]
 gi|226480236|emb|CAX78782.1| ribosomal protein L3 [Schistosoma japonicum]
 gi|226480238|emb|CAX78783.1| ribosomal protein L3 [Schistosoma japonicum]
 gi|226480240|emb|CAX78784.1| ribosomal protein L3 [Schistosoma japonicum]
 gi|226480242|emb|CAX78785.1| ribosomal protein L3 [Schistosoma japonicum]
 gi|226480244|emb|CAX78786.1| ribosomal protein L3 [Schistosoma japonicum]
          Length = 419

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 192/321 (59%), Positives = 239/321 (74%), Gaps = 18/321 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGF P+KR  R RGK KAFP+D  S P  LTAF+GYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFTPKKRCRRIRGKCKAFPRDRRSLPPHLTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  E VTI+E PP+V+VG+VGY  T +GLR+  TVWA+HL EE RRRFYK
Sbjct: 61  DRPGSKVHKREVVEPVTIMECPPMVIVGMVGYAPTAKGLRTFKTVWAEHLTEECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           +WCKSKKKAFTK ++K+  + G   I   L+K+KKYCTV+R              KKAH+
Sbjct: 121 DWCKSKKKAFTKASRKWADEAGLALINRDLKKIKKYCTVVRAIAHTQMRLMKHRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+++QKVD+    FEKQIP+  VF +DEMID+IGVTKGKG++GV +RW   +L
Sbjct: 181 MEIQVNGGTISQKVDWIRQHFEKQIPVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE----SHS 282
           PRKTH+GLRKVACIGAWHPARV+ +VARAGQ GY HRTE+NKKIY++G   Q     + +
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVARSVARAGQKGYFHRTELNKKIYRIGMGLQAQLEVAKA 300

Query: 283 AMTEFDRSVYLLSSLMGSFSS 303
              + DR   +L    G+ S+
Sbjct: 301 EAAKDDRDKNVLPKPKGNAST 321


>gi|114660361|ref|XP_001160309.1| PREDICTED: ribosomal protein L3-like [Pan troglodytes]
          Length = 407

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 189/319 (59%), Positives = 238/319 (74%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHG LGFLP KR+ RHRGKVK +P+DDPS+P  LTAFLGYKAGMTH +R+V
Sbjct: 1   MSHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
            +PG K+ K+E  EAVTI+ETPPL+VVGVVGYV TPRGLRS  T++A+HL++E RRRFYK
Sbjct: 61  HRPGLKISKREEVEAVTIVETPPLMVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           +W KSKKKAFTK  K++   DGKK +Q     MKKYC VIR              KKAH+
Sbjct: 121 DWHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG+VA+KV +A    EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW   +L
Sbjct: 181 MEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------ 280
           PRKTH+GLRKVACIGAWHPARV  ++ARAGQ GYHHRTE+NKKI+++G+           
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIFRIGRGPHMEDGKPVK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T +D +   ++ L G
Sbjct: 301 NNASTSYDVTAKSITPLGG 319


>gi|320166087|gb|EFW42986.1| ribosomal protein L3 isoform b [Capsaspora owczarzaki ATCC 30864]
          Length = 416

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 198/315 (62%), Positives = 250/315 (79%), Gaps = 17/315 (5%)

Query: 2   SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
           +HRKF  PRHGSLGF PRKR++ HRG+VK+FP+DD SKPC LTAFLGYKAGMTH+VR+V+
Sbjct: 21  AHRKFSAPRHGSLGFAPRKRSATHRGRVKSFPRDDASKPCHLTAFLGYKAGMTHVVREVD 80

Query: 62  KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
           + GSKL+KKE  EAVTI+E PP+VVVG VGYV TPRGLR+L TVWA+HL+EEVRRRFYKN
Sbjct: 81  RMGSKLNKKEIVEAVTIVEAPPVVVVGAVGYVATPRGLRALTTVWAEHLSEEVRRRFYKN 140

Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAHL 166
           W + KKKAFTKY KKY T++GKK I+ + +++KKYC+V+R               KKAH+
Sbjct: 141 WYQCKKKAFTKYAKKYSTEEGKKSIEKEFDRIKKYCSVVRLLVHTQTKKLNLGGQKKAHI 200

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGSVA K+ +A   FEK+I +  VF ++EM+D+IGVT+GKG+ GV  R+G  RL
Sbjct: 201 MEIQVNGGSVADKLKYARSHFEKEISLKDVFSENEMVDVIGVTRGKGFTGVTYRFGTRRL 260

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKL--GKASQESHSAM 284
           PRK+H+GLRKVACIGAWHPA V+ +VARAGQ GYHHRTE+NKKIY++  G +S   ++A 
Sbjct: 261 PRKSHKGLRKVACIGAWHPANVNRSVARAGQKGYHHRTELNKKIYRVGAGASSGAKNNAS 320

Query: 285 TEFDRSVYLLSSLMG 299
           TE+D +   ++ L G
Sbjct: 321 TEYDITEKNITPLGG 335


>gi|260790238|ref|XP_002590150.1| hypothetical protein BRAFLDRAFT_126055 [Branchiostoma floridae]
 gi|229275339|gb|EEN46161.1| hypothetical protein BRAFLDRAFT_126055 [Branchiostoma floridae]
          Length = 404

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 197/319 (61%), Positives = 245/319 (76%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR  R +GKVKAFPKDD SKP  LTAF+GYKAGMTH++R+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRCRRAKGKVKAFPKDDASKPPHLTAFMGYKAGMTHVLREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           E+ G+K  K+E  +AVTIIETPP+VVVGVVGY+ TP+G R+  T++A+HL+EE RRRFYK
Sbjct: 61  ERTGAKSTKREVVDAVTIIETPPMVVVGVVGYIATPKGRRAFRTIFAEHLSEECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW  SKKKAFTKY KK++ DDGKK I+   ++MKKYC  IR              KK+H+
Sbjct: 121 NWYSSKKKAFTKYAKKWQDDDGKKQIEKDFKQMKKYCINIRVIVHTQMKDLPHRQKKSHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG++A+KVD+A    EKQIP+  VF +DEMIDIIG+TKGKG++GV +RWG  +L
Sbjct: 181 MEIQVNGGTIAEKVDWAREHLEKQIPVSQVFGQDEMIDIIGITKGKGFKGVTSRWGTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHPARV + VARAGQ GY+HRTE+NKK+Y++G            
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVGYGVARAGQKGYNHRTEINKKVYRVGTGIHVKDGKVIK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A TE+D +   ++ L G
Sbjct: 301 NNAATEYDLTEKTITPLGG 319


>gi|224004980|ref|XP_002296141.1| RL3, ribosomal protein 3, 60S large ribosomal subunit
           [Thalassiosira pseudonana CCMP1335]
 gi|209586173|gb|ACI64858.1| RL3, ribosomal protein 3, 60S large ribosomal subunit
           [Thalassiosira pseudonana CCMP1335]
          Length = 395

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 197/317 (62%), Positives = 250/317 (78%), Gaps = 19/317 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKD-DPSKPCRLTAFLGYKAGMTHIVRD 59
           MSHRKFE PRHG+LGFLP+KR   H G++++FPKD D S P  LTAF  YKAGMTH+VR 
Sbjct: 1   MSHRKFEAPRHGNLGFLPKKRTKHHSGRIRSFPKDNDASAPPHLTAFRAYKAGMTHVVRG 60

Query: 60  VEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFY 119
           V++PG+ +HK+E  +AV+I+ETPP+VVVGVVGY++TPRGLR+L TV+A+HL+EE +RR Y
Sbjct: 61  VDRPGAVMHKREVVDAVSILETPPMVVVGVVGYLETPRGLRTLTTVFAEHLSEEFKRRAY 120

Query: 120 KNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAH 165
           KNW KSK+KA+TKY KKY  +DGK DI+ +LE++ K+C V+R              +KAH
Sbjct: 121 KNWYKSKRKAYTKYAKKYTENDGK-DIEKELERIAKHCKVVRVITHSQVKKLHLRIRKAH 179

Query: 166 LMEIQVNGGSVAQ-KVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 224
           +ME+Q+NGG+ A+ KVDFA   FEK++ +D+VF KDE+ID++GVTKG GYEGV TRWGV+
Sbjct: 180 IMEVQINGGADAKAKVDFAKSLFEKEVTVDSVFAKDELIDVLGVTKGHGYEGVTTRWGVS 239

Query: 225 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAM 284
           RLPRKTHRGLRKVACIG+WHPARVS TV RAGQNGYHHRTEMNKKIY++GK    S S  
Sbjct: 240 RLPRKTHRGLRKVACIGSWHPARVSDTVPRAGQNGYHHRTEMNKKIYRIGKKGDNS-SCQ 298

Query: 285 TEFDRSVYLLSSLMGSF 301
           T+ D +   ++  MG F
Sbjct: 299 TDADLTEKSITP-MGGF 314


>gi|46123823|ref|XP_386465.1| RL3_NEUCR 60S ribosomal protein L3 [Gibberella zeae PH-1]
          Length = 378

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 182/300 (60%), Positives = 234/300 (78%), Gaps = 16/300 (5%)

Query: 14  LGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 73
           + +LPRKRA+RHRGKVK+FPKDDP KP  LTA +GYKAGMT IVRD+++PG+K +KKE  
Sbjct: 1   MAYLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDLDRPGAKANKKEIV 60

Query: 74  EAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKY 133
           EAVTI++TPP++VVG+VGY++TPRGLRSL TVWA+HL++E++RRFYKNW KSKKKAFTKY
Sbjct: 61  EAVTIVDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEIKRRFYKNWYKSKKKAFTKY 120

Query: 134 TKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLMEIQVNGGSVAQK 179
            KK+  ++G   I  +LE++KKYCTV+R              KKAHLMEIQVNGGS+A K
Sbjct: 121 AKKHSENNG-ASITRELERIKKYCTVVRVLAHTQIRKTPLKQKKAHLMEIQVNGGSIADK 179

Query: 180 VDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVAC 239
           V F    FEK + + ++F++DEMID++ VTKG G+ GV  RWG  +LPRKTH+GLRKVAC
Sbjct: 180 VSFGQELFEKPVDVSSIFEQDEMIDVVAVTKGHGFNGVTARWGTKKLPRKTHKGLRKVAC 239

Query: 240 IGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRSVYLLSSLMG 299
           IGAWHP+ V +TVARAGQ GYHHRT +N KIY++GK   + ++A TE D +   ++ L G
Sbjct: 240 IGAWHPSHVQWTVARAGQMGYHHRTSVNHKIYRIGKGDADDNAA-TEIDVTKKTITPLGG 298


>gi|50311593|ref|XP_455822.1| 60S ribosomal protein L3 [Kluyveromyces lactis NRRL Y-1140]
 gi|74660266|sp|Q6CJR7.1|RL3_KLULA RecName: Full=60S ribosomal protein L3
 gi|49644958|emb|CAG98530.1| KLLA0F16511p [Kluyveromyces lactis]
          Length = 387

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 196/315 (62%), Positives = 249/315 (79%), Gaps = 18/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHG LGFLPRKRA+  RG+VK+FPKDD +KP  LT+FLGYKAGM+ IVRD+
Sbjct: 1   MSHRKYEAPRHGHLGFLPRKRAASVRGRVKSFPKDDQTKPVALTSFLGYKAGMSTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK HK+E  EAVT+++TPP+VVVGVVGYV+TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGSKFHKREVVEAVTVVDTPPIVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY+ KY  +  + D   +L ++KKY +V+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYSAKYAENGAQVD--RELARIKKYASVVRVLVHTQVRKTPLSQKKAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQ+NGGSV+ KVD+A   FEK + +D+VF+++EMID++ VTKG G+EGV  RWG  +L
Sbjct: 179 AEIQLNGGSVSDKVDWAKEHFEKTVAVDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKKL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPA V ++VARAGQ GYHHRT +N K+Y++GK   E+++A TE
Sbjct: 239 PRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHHRTSINHKVYRVGKGDDEANAA-TE 297

Query: 287 FDRSVYLLSSLMGSF 301
           FDR+   ++  MG F
Sbjct: 298 FDRTKKTITP-MGGF 311


>gi|365989292|ref|XP_003671476.1| ribosomal protein L3 [Naumovozyma dairenensis CBS 421]
 gi|343770249|emb|CCD26233.1| hypothetical protein NDAI_0H00590 [Naumovozyma dairenensis CBS 421]
          Length = 387

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 198/317 (62%), Positives = 246/317 (77%), Gaps = 18/317 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHG LGFLPRKRA   RG+VK+FPKDD SKP  LT+FLGYKAGMT IVRD+
Sbjct: 1   MSHRKFEQPRHGHLGFLPRKRAVSIRGRVKSFPKDDQSKPVALTSFLGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK HK+E  EAV++++TP LVVVGVVGYV+TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGSKFHKREIVEAVSVVDTPALVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY+ KY  D    +I+ +L ++ KY +V+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDGA--EIERELARISKYASVVRVLVHTQIRKTPLAQKKAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQ+NGGS+A+KV +A   FEK + +D+VF+++EMID++ VTKG G+EGV  RWG  +L
Sbjct: 179 AEIQLNGGSIAEKVQWAREHFEKTVSVDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKKL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPA V +TVARAGQ GYHHRT +N K+Y++GK   ES+ + T 
Sbjct: 239 PRKTHRGLRKVACIGAWHPAHVMWTVARAGQRGYHHRTSINHKVYRVGKGEDESNGS-TS 297

Query: 287 FDRSVYLLSSLMGSFSS 303
           FDR+   ++  MG F S
Sbjct: 298 FDRTKKTITP-MGGFVS 313


>gi|442753801|gb|JAA69060.1| Putative ribosomal protein [Ixodes ricinus]
          Length = 390

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 188/308 (61%), Positives = 240/308 (77%), Gaps = 21/308 (6%)

Query: 14  LGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 73
           +GF+P+KR+ R RGKVKAFPKDDP+KP  LTAFLG+KAGMTHIVR+V+KPGSK++KKE  
Sbjct: 1   MGFVPKKRSKRLRGKVKAFPKDDPTKPIHLTAFLGFKAGMTHIVREVDKPGSKVNKKEVV 60

Query: 74  EAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKY 133
           E VTI+E PP+++VG+VGY++TP+GLR+  TVWA+HL+EE RRRFYKNW KSKKKAFTK 
Sbjct: 61  EPVTILEVPPMMIVGLVGYIETPKGLRAFKTVWAEHLSEECRRRFYKNWYKSKKKAFTKS 120

Query: 134 TKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLMEIQVNGGSVAQK 179
           +KK++ D GK++I+  L+KMKKYC VIR              KKAH+MEIQVNGGSV  K
Sbjct: 121 SKKWQEDLGKQEIERDLKKMKKYCKVIRVLAHTQMKLMRRRQKKAHIMEIQVNGGSVGAK 180

Query: 180 VDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVAC 239
           + +A    EK + +  VF +DEMID+IGVTKGKG++GV +RW   +LPRKTH+GLRKVAC
Sbjct: 181 IKWAREHLEKPVTVSQVFAQDEMIDVIGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVAC 240

Query: 240 IGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------HSAMTEFDRSVYL 293
           IGAWHP+RV FTVARAGQ GYHHRTE+NKKIY++G+   +       ++A T++D S   
Sbjct: 241 IGAWHPSRVQFTVARAGQKGYHHRTEINKKIYRIGQGVHKKDGKLVVNNAATDYDTSNKS 300

Query: 294 LSSLMGSF 301
           ++  MG F
Sbjct: 301 ITP-MGGF 307


>gi|241859209|ref|XP_002416193.1| ribosomal protein L3, putative [Ixodes scapularis]
 gi|215510407|gb|EEC19860.1| ribosomal protein L3, putative [Ixodes scapularis]
          Length = 390

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 188/308 (61%), Positives = 240/308 (77%), Gaps = 21/308 (6%)

Query: 14  LGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 73
           +GF+P+KR+ R RGKVKAFPKDDP+KP  LTAFLG+KAGMTHIVR+V+KPGSK++KKE  
Sbjct: 1   MGFVPKKRSKRLRGKVKAFPKDDPTKPIHLTAFLGFKAGMTHIVREVDKPGSKVNKKEVV 60

Query: 74  EAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKY 133
           E VTI+E PP+++VG+VGY++TP+GLR+  TVWA+HL+EE RRRFYKNW KSKKKAFTK 
Sbjct: 61  EPVTILEVPPMMIVGLVGYIETPKGLRAFKTVWAEHLSEECRRRFYKNWYKSKKKAFTKS 120

Query: 134 TKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLMEIQVNGGSVAQK 179
           +KK++ D GK++I+  L+KMKKYC VIR              KKAH+MEIQVNGGSV  K
Sbjct: 121 SKKWQEDLGKQEIERDLKKMKKYCKVIRVLAHTQMKLMRRRQKKAHIMEIQVNGGSVGAK 180

Query: 180 VDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVAC 239
           + +A    EK + +  VF +DEMID+IGVTKGKG++GV +RW   +LPRKTH+GLRKVAC
Sbjct: 181 IKWAREHLEKPVTVSQVFAQDEMIDVIGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVAC 240

Query: 240 IGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------HSAMTEFDRSVYL 293
           IGAWHP+RV FTVARAGQ GYHHRTE+NKKIY++G+   +       ++A T++D S   
Sbjct: 241 IGAWHPSRVQFTVARAGQKGYHHRTEINKKIYRIGQGVHKKDGKLVVNNAATDYDTSNKS 300

Query: 294 LSSLMGSF 301
           ++  MG F
Sbjct: 301 ITP-MGGF 307


>gi|226480222|emb|CAX78775.1| ribosomal protein L3 [Schistosoma japonicum]
          Length = 419

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 191/321 (59%), Positives = 238/321 (74%), Gaps = 18/321 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGF P+KR  R RGK KAFP+D  S P  LTAF+GYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFTPKKRCRRIRGKCKAFPRDRRSLPPHLTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  E VTI+E PP+V+VG+VGY  T +GLR+  TVWA+HL EE RRRFYK
Sbjct: 61  DRPGSKVHKREVVEPVTIMECPPMVIVGMVGYAPTAKGLRTFKTVWAEHLTEECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           +WCKSKKK FTK ++K+  + G   I   L+K+KKYCTV+R              KKAH+
Sbjct: 121 DWCKSKKKDFTKASRKWADEAGLALINRDLKKIKKYCTVVRAIAHTQMRLMKHRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+++QKVD+    FEKQIP+  VF +DEMID+IGVTKGKG++GV +RW   +L
Sbjct: 181 MEIQVNGGTISQKVDWIRQHFEKQIPVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE----SHS 282
           PRKTH+GLRKVACIGAWHPARV+ +VARAGQ GY HRTE+NKKIY++G   Q     + +
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVARSVARAGQKGYFHRTELNKKIYRIGMGLQAQLEVAKA 300

Query: 283 AMTEFDRSVYLLSSLMGSFSS 303
              + DR   +L    G+ S+
Sbjct: 301 EAAKDDRDKNVLPKPKGNAST 321


>gi|226480224|emb|CAX78776.1| ribosomal protein L3 [Schistosoma japonicum]
          Length = 419

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 191/321 (59%), Positives = 238/321 (74%), Gaps = 18/321 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGF P+KR  R RGK KAFP+D  S P  LTAF+GYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFTPKKRCRRIRGKCKAFPRDRRSLPPHLTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  E VTI+E PP+V+VG+VGY  T +GLR+  TVWA+HL EE RRRFYK
Sbjct: 61  DRPGSKVHKREVVEPVTIMECPPMVIVGMVGYAPTAKGLRTFKTVWAEHLTEECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           +WCKSKKKAFTK ++K+  + G   I   L+K+KKYCTV+R              KKAH+
Sbjct: 121 DWCKSKKKAFTKASRKWADEAGLALINRDLKKIKKYCTVVRAIAHTQMRLMKHRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+++QKVD+    FEKQIP+  VF +DEMID+IGVTKGKG++GV +RW   +L
Sbjct: 181 MEIQVNGGTISQKVDWIRQHFEKQIPVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE----SHS 282
           PRKTH+GLRKVACIGAWHPARV+ +VARAGQ  Y HRTE+NKKIY++G   Q     + +
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVARSVARAGQKSYFHRTELNKKIYRIGMGLQAQLEVAKA 300

Query: 283 AMTEFDRSVYLLSSLMGSFSS 303
              + DR   +L    G+ S+
Sbjct: 301 EAAKDDRDKNVLPKPKGNAST 321


>gi|156082902|ref|XP_001608935.1| ribosomal protein L3 [Babesia bovis T2Bo]
 gi|154796185|gb|EDO05367.1| ribosomal protein L3, putative [Babesia bovis]
          Length = 393

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 189/315 (60%), Positives = 236/315 (74%), Gaps = 20/315 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PR G+LGF P+KR    RGK+++FPKDDP+KP   TAF+GYKAGMTH+  + 
Sbjct: 1   MSHRKFERPRSGNLGFFPKKRCKSQRGKIRSFPKDDPTKPPHFTAFMGYKAGMTHVTHEP 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           +KPGSKLHKK+T EAVTIIETPP++VVG+VGY++TPRGLR L TVWA HL++E RRRFYK
Sbjct: 61  DKPGSKLHKKDTVEAVTIIETPPMIVVGLVGYIETPRGLRVLTTVWAGHLSDECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK+      KDI     ++  YCTV+R              KKA +
Sbjct: 121 NWYKSKKKAFTKYAKKFAETKMSKDI----SRIVNYCTVVRAICHTQPSKTPLSMKKAFI 176

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           +EIQVNGG+V +KVD+    FE+ +P++AVF  +EM+D++GVTKG G +GV++R+GVTRL
Sbjct: 177 IEIQVNGGTVQEKVDYVTKMFEQPLPVNAVFASNEMVDVLGVTKGHGMKGVISRFGVTRL 236

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIG+WHPARV F V R+GQ GY HRTE NKKIY+LG  S    +A T+
Sbjct: 237 PRKTHRGLRKVACIGSWHPARVQFQVPRSGQKGYFHRTERNKKIYRLGLGSN-PRNASTD 295

Query: 287 FDRSVYLLSSLMGSF 301
            D +   ++  MG F
Sbjct: 296 ADLTEKQITP-MGGF 309


>gi|346469559|gb|AEO34624.1| hypothetical protein [Amblyomma maculatum]
          Length = 390

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 186/308 (60%), Positives = 240/308 (77%), Gaps = 21/308 (6%)

Query: 14  LGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 73
           +GF+P+KR+ R RGKVKAFPKDDP+KP  LTAFLG+KAGMTHIVR+V+KPGSK++KKE  
Sbjct: 1   MGFVPKKRSKRIRGKVKAFPKDDPTKPIHLTAFLGFKAGMTHIVREVDKPGSKVNKKEVV 60

Query: 74  EAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKY 133
           E VTI+ETPP+++VGVVGY++TP+GLR+  TVWA+HL+EE RRRFYKNW KSKKKAFTK 
Sbjct: 61  EPVTILETPPMMIVGVVGYIETPKGLRAFKTVWAEHLSEECRRRFYKNWYKSKKKAFTKS 120

Query: 134 TKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLMEIQVNGGSVAQK 179
            K+++ D G+++I+   +KMKKYC VIR              KKAH+MEIQVNGG+V  K
Sbjct: 121 CKRWQEDLGRQEIERDFKKMKKYCKVIRVLAHTQMKLMHRRQKKAHIMEIQVNGGTVGAK 180

Query: 180 VDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVAC 239
           + +A    EK +P+  VF +DEMID+IGVTKGKG++GV +RW   +LPRKTH+GLRKVAC
Sbjct: 181 IKWAREHLEKPVPVSQVFAQDEMIDVIGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVAC 240

Query: 240 IGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------HSAMTEFDRSVYL 293
           IGAWHP+RV FTVARAGQ G+HHRTE+NKKIY++G+   +       ++A T++D S   
Sbjct: 241 IGAWHPSRVQFTVARAGQKGFHHRTEINKKIYRIGQGVHKKDGKLVINNAATDYDTSNKS 300

Query: 294 LSSLMGSF 301
           ++  MG F
Sbjct: 301 ITP-MGGF 307


>gi|254579294|ref|XP_002495633.1| 60S ribosomal protein L3 [Zygosaccharomyces rouxii]
 gi|238938523|emb|CAR26700.1| ZYRO0B16082p [Zygosaccharomyces rouxii]
          Length = 388

 Score =  387 bits (994), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 195/315 (61%), Positives = 246/315 (78%), Gaps = 18/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+  PRHGSLGFLPRKR +  RG+VK+FPKDD +KP  LT+FLGYKAGM+ IVRD+
Sbjct: 1   MSHRKYSAPRHGSLGFLPRKRCASPRGRVKSFPKDDKTKPVGLTSFLGYKAGMSTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK HK+E  EAV++++TPPLVVVGVVGYV+TPRGLRSL TVWA+HL++E++RRFY+
Sbjct: 61  DRPGSKFHKREVVEAVSVVDTPPLVVVGVVGYVETPRGLRSLTTVWAEHLSDEIKRRFYR 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY+ KY  D  +  I+ +L ++ KY TV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDAAQ--IERELARINKYATVVRVLAHTQIRKTPLSQKKAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQ+NGG+ A KV +A   FEK + +D+VF+++EMID+  VTKG GYEGV  RWG TRL
Sbjct: 179 AEIQINGGTTADKVAWAKEHFEKTVSVDSVFEQNEMIDVAAVTKGHGYEGVTHRWGTTRL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHP  V ++VARAGQNG+HHRT +N KIY++GK   E+++A TE
Sbjct: 239 PRKTHRGLRKVACIGAWHPNHVMWSVARAGQNGFHHRTSINHKIYRVGKGDDEANAA-TE 297

Query: 287 FDRSVYLLSSLMGSF 301
           FDR+   ++  MG F
Sbjct: 298 FDRTKKTINP-MGGF 311


>gi|339247749|ref|XP_003375508.1| 60S ribosomal protein L3 [Trichinella spiralis]
 gi|316971123|gb|EFV54952.1| 60S ribosomal protein L3 [Trichinella spiralis]
          Length = 405

 Score =  387 bits (993), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 185/317 (58%), Positives = 248/317 (78%), Gaps = 23/317 (7%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           +SHRKF  PRHG +GFLP+KR+ RHRGKVK+FPKDDP KP  LTAF+GYKAGMTHIVR+V
Sbjct: 17  VSHRKFSAPRHGHVGFLPKKRSKRHRGKVKSFPKDDPQKPVHLTAFIGYKAGMTHIVREV 76

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVG--VVGYVKTPRGLRSLCTVWAQHLNEEVRRRF 118
           +KPGSK++KK+  EAVT++ETPP+V+VG  VVGY++TP+GLR+  T+WA+HL+++ +RR+
Sbjct: 77  DKPGSKINKKDVVEAVTVLETPPMVIVGKCVVGYIETPQGLRAFKTIWAEHLSDDCKRRY 136

Query: 119 YKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKA 164
                K ++KAFTK +KK++ + G K+IQ    +M KYC VIR              KKA
Sbjct: 137 -----KCERKAFTKASKKWQDEAGVKEIQTDFARMIKYCKVIRVIAHTQMKLLHHGQKKA 191

Query: 165 HLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 224
           H+MEIQ+NGG++ +KV++A    EKQ+P+D+VF +DEMID IGVTKGKG++GV +RW   
Sbjct: 192 HIMEIQLNGGTIEEKVNWAREHLEKQVPVDSVFARDEMIDCIGVTKGKGFKGVTSRWHTK 251

Query: 225 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAM 284
           +LPRKTH+GLRKVACIGAWHP+RV +TVARAGQ GYHHRTE+NKKIY++GK + + + + 
Sbjct: 252 KLPRKTHKGLRKVACIGAWHPSRVRYTVARAGQKGYHHRTEINKKIYRIGKGADKKNGS- 310

Query: 285 TEFDRSVYLLSSLMGSF 301
           TE+D +   ++  MG F
Sbjct: 311 TEYDLTEKTINP-MGGF 326


>gi|399215964|emb|CCF72652.1| unnamed protein product [Babesia microti strain RI]
          Length = 416

 Score =  386 bits (992), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 199/341 (58%), Positives = 244/341 (71%), Gaps = 47/341 (13%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPR GSLGFLPRKR  R RGK+++FPKDD SKP  L AF+GYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRRGSLGFLPRKRCRRQRGKIRSFPKDDQSKPTHLCAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           +KPGSKLHKKE  EAVTIIE PP++VVG+VGY+++ RGLR L TVWA HL++E +RRFYK
Sbjct: 61  DKPGSKLHKKEVVEAVTIIECPPMIVVGLVGYIES-RGLRVLSTVWAGHLSDECKRRFYK 119

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY+KK+ T      ++++L ++K YCTV+R              +K+H+
Sbjct: 120 NWYKSKKKAFTKYSKKFITT----RMESELARIKNYCTVVRAICHTQPSKTSIGLRKSHI 175

Query: 167 MEIQVNGGSVAQK--------------------------VDFAYGFFEKQIPIDAVFQKD 200
           MEIQVNGG+VA+K                          VDF    FE+ +PI  VF+++
Sbjct: 176 MEIQVNGGTVAEKWQPVRPVVRKTMKLPNHTTYKTKLTQVDFVVSLFEQPVPISTVFEEN 235

Query: 201 EMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGY 260
           EMID I VTKG G +GVV+R+GVTRLPRKTHRGLRKVACIGAWHPARV F VARAGQ GY
Sbjct: 236 EMIDTIAVTKGHGVKGVVSRYGVTRLPRKTHRGLRKVACIGAWHPARVQFQVARAGQKGY 295

Query: 261 HHRTEMNKKIYKLGKASQESHSAMTEFDRSVYLLSSLMGSF 301
            HRTE NKKIY++G   +   +A T+ D +   ++  MG F
Sbjct: 296 FHRTERNKKIYRIG-LGRNPRNASTDSDVTEKQITP-MGGF 334


>gi|256079531|ref|XP_002576040.1| 60S ribosomal protein L3 [Schistosoma mansoni]
          Length = 419

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 184/292 (63%), Positives = 227/292 (77%), Gaps = 14/292 (4%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGF P+KR  R RGK KAFP+D  S P  LTAF+GYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFTPKKRCRRIRGKCKAFPRDRRSLPPHLTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  E VTI+E PP+V+VG+VGY  T +GLR+  TVWA+HL EE +RRFYK
Sbjct: 61  DRPGSKVHKREVVEPVTIMECPPMVIVGMVGYAPTAKGLRTFKTVWAEHLTEEFKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           +WCKSKK+AF K +KK+  + G   I+  L+K+KKYCTV+R              KK+H+
Sbjct: 121 DWCKSKKRAFLKSSKKWLCEAGLAQIKRDLKKIKKYCTVVRAIAHTQMRLMKHRQKKSHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           ME+QVNGG+V+QKVD+    FEKQI +  VF +DEMID+IGVTKGKG++GV +RW   +L
Sbjct: 181 MEVQVNGGTVSQKVDWIRQHFEKQISVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ 278
           PRKTH+GLRKVACIGAWHPARV+ +VARAGQ GY HRTE+NKKIYK+G   Q
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVARSVARAGQKGYFHRTELNKKIYKIGMGLQ 292


>gi|360044569|emb|CCD82117.1| putative 60s ribosomal protein L3 [Schistosoma mansoni]
          Length = 419

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 184/292 (63%), Positives = 227/292 (77%), Gaps = 14/292 (4%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGF P+KR  R RGK KAFP+D  S P  LTAF+GYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFTPKKRCRRIRGKCKAFPRDRRSLPPHLTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  E VTI+E PP+V+VG+VGY  T +GLR+  TVWA+HL EE +RRFYK
Sbjct: 61  DRPGSKVHKREVVEPVTIMECPPMVIVGMVGYAPTAKGLRTFKTVWAEHLTEEFKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           +WCKSKK+AF K +KK+  + G   I+  L+K+KKYCTV+R              KK+H+
Sbjct: 121 DWCKSKKRAFLKSSKKWLCEAGLAQIKRDLKKIKKYCTVVRAIAHTQMRLMKHRQKKSHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           ME+QVNGG+V+QKVD+    FEKQI +  VF +DEMID+IGVTKGKG++GV +RW   +L
Sbjct: 181 MEVQVNGGTVSQKVDWIRQHFEKQISVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ 278
           PRKTH+GLRKVACIGAWHPARV+ +VARAGQ GY HRTE+NKKIYK+G   Q
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVARSVARAGQKGYFHRTELNKKIYKIGMGLQ 292


>gi|76496472|ref|NP_001029025.1| 60S ribosomal protein L3 isoform b [Homo sapiens]
 gi|397502003|ref|XP_003821662.1| PREDICTED: 60S ribosomal protein L3 isoform 2 [Pan paniscus]
 gi|426394516|ref|XP_004063541.1| PREDICTED: 60S ribosomal protein L3 isoform 2 [Gorilla gorilla
           gorilla]
          Length = 354

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 189/305 (61%), Positives = 231/305 (75%), Gaps = 41/305 (13%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  TV+A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKV 180
           NW KSK                                   KKAHLMEIQVNGG+VA+K+
Sbjct: 121 NWHKSK-----------------------------------KKAHLMEIQVNGGTVAEKL 145

Query: 181 DFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACI 240
           D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW   +LPRKTHRGLRKVACI
Sbjct: 146 DWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACI 205

Query: 241 GAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQESHSAMTEFDRSVYLL 294
           GAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           ++A T++D S   +
Sbjct: 206 GAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSI 265

Query: 295 SSLMG 299
           + L G
Sbjct: 266 NPLGG 270


>gi|254572870|ref|XP_002493544.1| 60S ribosomal protein L3 [Komagataella pastoris GS115]
 gi|238033343|emb|CAY71365.1| Protein component of the large (60S) ribosomal subunit
           [Komagataella pastoris GS115]
 gi|328354631|emb|CCA41028.1| 60S ribosomal protein L3 [Komagataella pastoris CBS 7435]
          Length = 388

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 193/313 (61%), Positives = 244/313 (77%), Gaps = 17/313 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSLGFLP+KRAS  R + KAFPKDD SKP  LTAF+GYKAGM+ IVRD+
Sbjct: 1   MSHRKFEAPRHGSLGFLPKKRASSPRARCKAFPKDDKSKPVALTAFMGYKAGMSTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  EAV+I++TPPLVVVGVVGYV+T  GL+SL TVWA+HL+++VRRRFYK
Sbjct: 61  DRPGSKMHKREVVEAVSIVDTPPLVVVGVVGYVETTSGLKSLTTVWAEHLSDDVRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKK AF+KY+ KY  D     I+ +L ++KKY +V+R              K+AHL
Sbjct: 121 NWYKSKKVAFSKYSAKYANDPA--SIETELARIKKYASVVRVLVHTQIRKTPLNQKRAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQ+NGGS+++KVD+A   FE+ I +D VF+++E ID+I VTKG G+EGV  RWG  +L
Sbjct: 179 AEIQINGGSISEKVDWARDHFEQTIAVDTVFEQNENIDVIAVTKGHGFEGVTHRWGTKKL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPA V +TVARAGQNG+HHRT +N KIY++GK   ES+ + TE
Sbjct: 239 PRKTHRGLRKVACIGAWHPAHVMWTVARAGQNGFHHRTSINHKIYRVGKGDDESNGS-TE 297

Query: 287 FDRSVYLLSSLMG 299
           +DR+   ++ L G
Sbjct: 298 YDRTKKTVTPLGG 310


>gi|219121047|ref|XP_002185755.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|209582604|gb|ACI65225.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 389

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 193/314 (61%), Positives = 245/314 (78%), Gaps = 17/314 (5%)

Query: 2   SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
           SHRKFE PRHGSLGFLP+KR   H G++++FP+DD ++   LTAF GYKAGMTH+VR V+
Sbjct: 1   SHRKFEAPRHGSLGFLPKKRTKYHSGRIRSFPRDDAAEQPHLTAFRGYKAGMTHVVRGVD 60

Query: 62  KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
           +PG+ +HK+E  +AV+I+ETPP+VVVGVVGYV+TP GLR+L TV+ +HL+EE +RR YKN
Sbjct: 61  RPGALMHKREVVDAVSIVETPPMVVVGVVGYVETPSGLRTLTTVFTEHLSEEFKRRCYKN 120

Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLM 167
           W  SKKKA+TKY  KY+ D G KDI+ +LE++KK+C+V+R              KKAH+M
Sbjct: 121 WYNSKKKAYTKYALKYQKDGG-KDIENELERIKKFCSVVRVIAHSQVKKLNLRIKKAHIM 179

Query: 168 EIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 227
           EIQVNGG  A KVDFA   FEK++ +D++F KDE ID++GVT+G GYEGV TRWGV+RLP
Sbjct: 180 EIQVNGGDTAAKVDFAKNLFEKEVTVDSIFAKDEQIDVLGVTRGHGYEGVTTRWGVSRLP 239

Query: 228 RKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEF 287
           RKTHRGLRKVACIG+WHPARVS TV RAGQNGY HRTEMNKK+Y++GK   E+ S  T+ 
Sbjct: 240 RKTHRGLRKVACIGSWHPARVSTTVPRAGQNGYFHRTEMNKKVYRVGKKGDEA-SCQTDA 298

Query: 288 DRSVYLLSSLMGSF 301
           D +   ++  MG F
Sbjct: 299 DLTKKSITP-MGGF 311


>gi|296236923|ref|XP_002763539.1| PREDICTED: 60S ribosomal protein L3 isoform 2 [Callithrix jacchus]
          Length = 354

 Score =  384 bits (985), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 188/305 (61%), Positives = 231/305 (75%), Gaps = 41/305 (13%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  TV+A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKV 180
           NW KSK                                   KKAHLMEIQVNGG+V++K+
Sbjct: 121 NWHKSK-----------------------------------KKAHLMEIQVNGGTVSEKL 145

Query: 181 DFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACI 240
           D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW   +LPRKTHRGLRKVACI
Sbjct: 146 DWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACI 205

Query: 241 GAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQESHSAMTEFDRSVYLL 294
           GAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           ++A T++D S   +
Sbjct: 206 GAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSI 265

Query: 295 SSLMG 299
           + L G
Sbjct: 266 NPLGG 270


>gi|384483788|gb|EIE75968.1| 60S ribosomal protein L3 [Rhizopus delemar RA 99-880]
          Length = 384

 Score =  383 bits (984), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 193/310 (62%), Positives = 241/310 (77%), Gaps = 18/310 (5%)

Query: 6   FEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGS 65
            + PRHG LGF PRKR   HRG+VKA+PKDD  KP  LTAF+GYKAGMTHIVRD+E+PGS
Sbjct: 3   MQSPRHGHLGFGPRKRTRSHRGRVKAYPKDDAKKPVHLTAFMGYKAGMTHIVRDLERPGS 62

Query: 66  KLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKS 125
           K+HKKE  EAVT+IE P +VVVGVVGYV+TPRGLRSL TVWA+HL+EE +RRFYKNW +S
Sbjct: 63  KMHKKEIVEAVTVIEVPAMVVVGVVGYVETPRGLRSLTTVWAEHLSEEAKRRFYKNWYRS 122

Query: 126 KKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLMEIQV 171
           KKKAFTKY +KY   +G KD+  +LE++KKYC+V+R              +KAH+MEIQ+
Sbjct: 123 KKKAFTKYAQKYA--EGAKDVTRELERIKKYCSVVRVIAHTQISKAKLHQRKAHIMEIQL 180

Query: 172 NGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 231
           NGGSV QKVD+A   FEK++ + ++F++DEMIDII  TKG G+EGV  RWG  +LPRKTH
Sbjct: 181 NGGSVEQKVDWAREHFEKEVTVGSIFEQDEMIDIIATTKGHGFEGVTHRWGTKKLPRKTH 240

Query: 232 RGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRSV 291
           RGLRKVACIGAWHP+RV ++VARAGQ GYH RTE+NKKIY++   + ++ S  TE+D + 
Sbjct: 241 RGLRKVACIGAWHPSRVMYSVARAGQRGYHRRTEINKKIYRIATGA-DAKSGTTEYDLTE 299

Query: 292 YLLSSLMGSF 301
             ++  MG F
Sbjct: 300 KQITP-MGGF 308


>gi|449475910|ref|XP_002187558.2| PREDICTED: 60S ribosomal protein L3-like [Taeniopygia guttata]
          Length = 407

 Score =  383 bits (984), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 194/319 (60%), Positives = 242/319 (75%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHG LGFLP KR+ RHRGKVKA+PKDDPSKP  LTAFLGYKAGMTH VR+V
Sbjct: 1   MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKAWPKDDPSKPVHLTAFLGYKAGMTHTVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
            +PG K+ K+E  EAVTIIETPP+VVVGVVGY++TP+GLR+  TV+A+H+++E RRRFYK
Sbjct: 61  HRPGLKISKREEVEAVTIIETPPMVVVGVVGYIETPKGLRNFKTVFAEHISDECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ + GK+ ++     MKKYC VIR              KKAH+
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEAGKRQLEKDFAAMKKYCKVIRVIMHTQMRLLPLRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG+VA+KVD+     EKQI + +VF ++EMID+IGVTKG G +GV +RW   +L
Sbjct: 181 MEIQLNGGTVAEKVDWVRERLEKQISVHSVFSQNEMIDVIGVTKGHGMKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------ 280
           PRKTH+GLRKVACIGAWHPARV +++ARAGQ GYHHRTE+NKKIY++G            
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVGYSIARAGQKGYHHRTEINKKIYRIGHGIHVEDGKVVR 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T +D +   ++ L G
Sbjct: 301 NNASTHYDITEKTITPLGG 319


>gi|347970122|ref|XP_313303.5| AGAP003556-PA [Anopheles gambiae str. PEST]
 gi|333468788|gb|EAA08849.5| AGAP003556-PA [Anopheles gambiae str. PEST]
          Length = 404

 Score =  382 bits (982), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 188/308 (61%), Positives = 230/308 (74%), Gaps = 21/308 (6%)

Query: 14  LGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 73
           + F P+KRASRH+G+VKAFPKDD SKP  LTAFL YKAGMTHIVR+ ++PGSK++KKE  
Sbjct: 1   MAFYPKKRASRHQGRVKAFPKDDASKPVHLTAFLAYKAGMTHIVREADRPGSKINKKEVV 60

Query: 74  EAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKY 133
           EAVTI+ETPPLVVVG VGY++TP G R+LC VWAQHL+EE RRRFYKNW  SKKKAFTK 
Sbjct: 61  EAVTILETPPLVVVGAVGYIETPFGPRALCNVWAQHLSEECRRRFYKNWHASKKKAFTKA 120

Query: 134 TKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLMEIQVNGGSVAQK 179
           +KK+  D GKK I+   +KM +YC  IR              KKAH++EIQ+NGGS+A K
Sbjct: 121 SKKWTDDLGKKSIEDTFKKMVRYCKFIRVIAHSQIRLIKQGQKKAHIIEIQLNGGSIADK 180

Query: 180 VDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVAC 239
           V++     EK IP+  VF +DEMID + VTKGKG++GV +RW   +LPRKTH+GLRKVAC
Sbjct: 181 VNWVKEHLEKPIPVSQVFSQDEMIDCVAVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVAC 240

Query: 240 IGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------SHSAMTEFDRSVYL 293
           IGAWHP+RV+FTVARAGQ GYHHRTE+NKKIY+LG            +SA TE+D +   
Sbjct: 241 IGAWHPSRVAFTVARAGQKGYHHRTELNKKIYRLGAGIHTKDGKVIKNSAATEYDLTDKS 300

Query: 294 LSSLMGSF 301
           ++  MG F
Sbjct: 301 ITP-MGGF 307


>gi|258565167|ref|XP_002583328.1| 60S ribosomal protein L3 [Uncinocarpus reesii 1704]
 gi|237907029|gb|EEP81430.1| 60S ribosomal protein L3 [Uncinocarpus reesii 1704]
          Length = 383

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 183/301 (60%), Positives = 229/301 (76%), Gaps = 17/301 (5%)

Query: 15  GFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCE 74
             LP    S     V +FPKDDP KP  LTA +GYKAGMT  VRD+E+PG+K+HKKE  E
Sbjct: 6   ALLPSCHGSAVPDTVASFPKDDPKKPVHLTAAMGYKAGMTTTVRDLERPGAKMHKKEIVE 65

Query: 75  AVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYT 134
           AVT++ETPP++ VGVVGY++TPRGLRSL TVWA+HL++E++RRFYKNW KSKKKAFTKY 
Sbjct: 66  AVTVVETPPMIAVGVVGYIETPRGLRSLTTVWAEHLSDEIKRRFYKNWYKSKKKAFTKYA 125

Query: 135 KKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLMEIQVNGGSVAQKV 180
           K Y  + G   +  +LE++KKYCTV+R              KKAHLMEIQVNGGS+A KV
Sbjct: 126 KNYSENKGA-SVTRELERIKKYCTVVRLLAHTQIRKTPLKQKKAHLMEIQVNGGSIADKV 184

Query: 181 DFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACI 240
           +FA+G FEK I ID++F++DEMID+I VTKG G++GV +RWG  +LPRKTH+GLRKVACI
Sbjct: 185 EFAHGLFEKPIEIDSIFEQDEMIDVIAVTKGHGFQGVTSRWGTKKLPRKTHKGLRKVACI 244

Query: 241 GAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRSVYLLSSLMGS 300
           GAWHP+ V +TVARAGQ+GYHHRT +N KIY++GK S E  +A T+FD S   ++  MG 
Sbjct: 245 GAWHPSHVQWTVARAGQDGYHHRTSVNHKIYRIGKGSDEG-NASTDFDVSKKQITP-MGG 302

Query: 301 F 301
           F
Sbjct: 303 F 303


>gi|47218047|emb|CAG11452.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 388

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 181/320 (56%), Positives = 242/320 (75%), Gaps = 21/320 (6%)

Query: 2   SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
           SHRKF  PRHG  GFLP KR+ +HRG+V+++PKDD S+P  LTAFLGYKAGMTH +R+V+
Sbjct: 1   SHRKFHAPRHGHTGFLPHKRSKKHRGRVRSWPKDDTSRPVHLTAFLGYKAGMTHTLREVQ 60

Query: 62  KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
           + G K  K+E  EAVTIIETPP++V GVVGY++T  GLRS  T++A+HL++E +RRFY+N
Sbjct: 61  RVGLKQSKREEVEAVTIIETPPVIVFGVVGYIRTVHGLRSFKTLFAEHLSDECKRRFYRN 120

Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLM 167
           W KSKKKAFTKY++K++   G+K +  ++E+MKKYC+VIR              KK+H+M
Sbjct: 121 WYKSKKKAFTKYSRKWQDQTGRKQLDKEIEQMKKYCSVIRVIVHTQMRLLPISQKKSHIM 180

Query: 168 EIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 227
           E+Q+NGGS++ KVD+A    E+ +P+ AVF +DEMIDIIGV+KG G++GV +RW   +LP
Sbjct: 181 EVQLNGGSISDKVDWAREHLERAVPVSAVFCQDEMIDIIGVSKGHGFKGVTSRWHTKKLP 240

Query: 228 RKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------H 281
           RKTH+GLRKVACIGAWHPARV +T+ARAGQ GYHHRTE+NKKI+++GK           +
Sbjct: 241 RKTHKGLRKVACIGAWHPARVGYTIARAGQKGYHHRTEINKKIFRIGKGVHIQDGKVIRN 300

Query: 282 SAMTEFDRSVYLLSSLMGSF 301
           +A T +D S   ++  MG F
Sbjct: 301 NASTSYDTSQKTITP-MGGF 319


>gi|18606060|gb|AAH22790.1| Unknown (protein for IMAGE:3538792), partial [Homo sapiens]
          Length = 374

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 184/290 (63%), Positives = 230/290 (79%), Gaps = 20/290 (6%)

Query: 30  KAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGV 89
           K+FPKDDPSKP  LTAFLGYKAGMTHIVR+V++PGSK++KKE  EAVTI+ETPP+VVVG+
Sbjct: 1   KSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGI 60

Query: 90  VGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQ 149
           VGYV+TPRGLR+  TV+A+H+++E +RRFYKNW KSKKKAFTKY KK++ +DGKK ++  
Sbjct: 61  VGYVETPRGLRTFKTVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKD 120

Query: 150 LEKMKKYCTVIR--------------KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDA 195
              MKKYC VIR              KKAHLMEIQVNGG+VA+K+D+A    E+Q+P++ 
Sbjct: 121 FSSMKKYCQVIRVIAHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQ 180

Query: 196 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARA 255
           VF +DEMID+IGVTKGKGY+GV +RW   +LPRKTHRGLRKVACIGAWHPARV+F+VARA
Sbjct: 181 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARA 240

Query: 256 GQNGYHHRTEMNKKIYKLGK------ASQESHSAMTEFDRSVYLLSSLMG 299
           GQ GYHHRTE+NKKIYK+G+           ++A T++D S   ++ L G
Sbjct: 241 GQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGG 290


>gi|326929147|ref|XP_003210731.1| PREDICTED: 60S ribosomal protein L3-like [Meleagris gallopavo]
          Length = 407

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 191/319 (59%), Positives = 242/319 (75%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHG LGFLP KR+ RHRGKVK +PKDDPSKP  LTAF+GYKAGMTH +R+V
Sbjct: 1   MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPKDDPSKPIHLTAFMGYKAGMTHTLREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
            +PG ++ K+E  EAVTIIETPP+VVVGVVGY+ TP+GLR+  TV+A+H+++E RRRFYK
Sbjct: 61  HRPGLRISKREEVEAVTIIETPPMVVVGVVGYIDTPKGLRNFKTVFAEHISDECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ +DGKK ++     MKKYC VIR              KKAH+
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFAAMKKYCKVIRVIMHTQMKLLPLRQKKAHV 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG+VA+K+D+     EKQI + +VF ++EMID+IGVTKG G +GV +RW   +L
Sbjct: 181 MEIQLNGGTVAEKIDWVRERLEKQISVHSVFSQNEMIDVIGVTKGHGMKGVTSRWHSKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------ 280
           PRKTH+GLRKVACIGAWHPARV ++VARAGQ GYHHRTE+NKKI+++G+           
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVGYSVARAGQKGYHHRTELNKKIFRIGRGIHVEDGKVVK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T +D +   ++ L G
Sbjct: 301 NNASTNYDVTEKSITPLGG 319


>gi|320586035|gb|EFW98714.1| 60S ribosomal protein L3 [Grosmannia clavigera kw1407]
          Length = 442

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 180/295 (61%), Positives = 227/295 (76%), Gaps = 16/295 (5%)

Query: 19  RKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTI 78
           RKR++ HRG+VK+FPKDDP KP  LTA LGYKAGMT IVRD+++PG+K HKKE  EAVTI
Sbjct: 69  RKRSASHRGRVKSFPKDDPKKPVHLTATLGYKAGMTTIVRDLDRPGAKSHKKEVVEAVTI 128

Query: 79  IETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYE 138
           ++TPP++VVG+VGY++TPRGLRSL TVWA+HL +E++RRFYKNW KSKKKAFTKY KK+ 
Sbjct: 129 VDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLGDELKRRFYKNWYKSKKKAFTKYAKKHS 188

Query: 139 TDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLMEIQVNGGSVAQKVDFAY 184
              G   I  ++E++KKYCTV+R              KKAHLMEIQ+NGGS A KV+F  
Sbjct: 189 ESKG-VSITREIERIKKYCTVVRVLAHTQIRKTPLKQKKAHLMEIQINGGSTADKVEFGQ 247

Query: 185 GFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWH 244
           G FEK   +D++F++DE+ID+I VTKG G+EGV  RWG  +LPRKTH+GLRKVACIGAWH
Sbjct: 248 GLFEKPFSVDSIFEQDEVIDVIAVTKGHGFEGVTARWGTKKLPRKTHKGLRKVACIGAWH 307

Query: 245 PARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRSVYLLSSLMG 299
           PA V +TVARAGQ GYHHRT +N KIY++GK   + + A T+ D +   ++ L G
Sbjct: 308 PAHVQWTVARAGQRGYHHRTSVNHKIYRIGKGGSDDN-ASTDLDVTKKTITPLGG 361


>gi|313227808|emb|CBY22957.1| unnamed protein product [Oikopleura dioica]
          Length = 403

 Score =  380 bits (977), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 173/289 (59%), Positives = 230/289 (79%), Gaps = 15/289 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSL FLP+KR +R RG++K+FPKDD SKP  LTAF+G+KAGMTH+VR+ 
Sbjct: 1   MSHRKFSAPRHGSLKFLPKKRCTRPRGQIKSFPKDDASKPIHLTAFMGFKAGMTHVVREA 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGS ++KKE  EAVTI+ETPPL V+G+ GY++TP G RS+ TVWA H+++E +RRFY+
Sbjct: 61  EKPGSAINKKEVVEAVTIVETPPLKVIGLTGYIETPDGPRSIKTVWANHISDEAKRRFYR 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           +W  SKKKAFTK +K++E++DGKK I+  +  +KKY   +R              KKAH+
Sbjct: 121 SWYSSKKKAFTKASKRWESEDGKKSIERDIAMIKKYSKNVRAICHTQMKGLSLRQKKAHI 180

Query: 167 MEIQVNGGS-VAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           +EIQ+NGG+ +A KVD+A   FEK++ ++ VF + EMID+IG+TKG+GY GV +RW   +
Sbjct: 181 IEIQINGGNGIADKVDWATSNFEKEVSVNTVFSEAEMIDVIGITKGRGYHGVTSRWHTKK 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLG 274
           LPRKTH+GLRKVACIGAWHP+RV+F+VAR+GQ GYHHRTE+NKK+Y++G
Sbjct: 241 LPRKTHKGLRKVACIGAWHPSRVAFSVARSGQKGYHHRTEINKKVYRVG 289


>gi|414585655|tpg|DAA36226.1| TPA: hypothetical protein ZEAMMB73_366909 [Zea mays]
          Length = 545

 Score =  379 bits (974), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 188/273 (68%), Positives = 213/273 (78%), Gaps = 31/273 (11%)

Query: 29  VKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVG 88
           VK+FP+DDP KPC LTAFLGYKAGMTHIV                             V 
Sbjct: 230 VKSFPRDDPKKPCHLTAFLGYKAGMTHIV-----------------------------VR 260

Query: 89  VVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQA 148
                 TPRGLR+L +VWAQHL+EEVRRRFYKNWCKSKKKAF+KY  KY++D GKK+IQ 
Sbjct: 261 SRSLAPTPRGLRTLNSVWAQHLSEEVRRRFYKNWCKSKKKAFSKYALKYDSDAGKKEIQL 320

Query: 149 QLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGV 208
           QLEK++K   + +KKAHLMEIQVNGG++A KVD+ Y FFE ++P+DAVFQKDEMIDIIGV
Sbjct: 321 QLEKIRKMKGLKQKKAHLMEIQVNGGTIADKVDYGYKFFE-EVPVDAVFQKDEMIDIIGV 379

Query: 209 TKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNK 268
           TKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNK
Sbjct: 380 TKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNK 439

Query: 269 KIYKLGKASQESHSAMTEFDRSVYLLSSLMGSF 301
           K+YK+GKA QESH A TEFDR+   ++  MG F
Sbjct: 440 KVYKIGKAGQESHDASTEFDRTEKDITP-MGGF 471


>gi|312385734|gb|EFR30160.1| hypothetical protein AND_00422 [Anopheles darlingi]
          Length = 405

 Score =  379 bits (973), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 183/308 (59%), Positives = 229/308 (74%), Gaps = 21/308 (6%)

Query: 14  LGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 73
           + F P+KRASRH+G++KAFPKDDP+KP  LTAFL YKAGMTHIVR+ ++PGSK++KKE  
Sbjct: 1   MAFYPKKRASRHQGRIKAFPKDDPTKPVHLTAFLAYKAGMTHIVREADRPGSKINKKEVL 60

Query: 74  EAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKY 133
           EAVTI+ETPP+VVVG VGY++TP G R+LC VWAQHL+EE RRRFYKNW  +KKKAFTK 
Sbjct: 61  EAVTILETPPIVVVGAVGYIETPFGPRALCNVWAQHLSEECRRRFYKNWHSAKKKAFTKA 120

Query: 134 TKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLMEIQVNGGSVAQK 179
           +KK+  D GKK I+   +KM +YC  IR              KKAH++EIQ+NGGSV  K
Sbjct: 121 SKKWTDDLGKKSIEDTFKKMIRYCKFIRVIAHSQIRMVKQGQKKAHIIEIQLNGGSVEDK 180

Query: 180 VDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVAC 239
           V++     EK IP+  VF +DEMID + VTKGKG++GV +RW   +LPRKTH+GLRKVAC
Sbjct: 181 VNWVKEHLEKPIPVSQVFSQDEMIDCVAVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVAC 240

Query: 240 IGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------SHSAMTEFDRSVYL 293
           IGAWHP+RV+FTVARAGQ GYHHRTE+NKKIY++G            +S  TE+D +   
Sbjct: 241 IGAWHPSRVAFTVARAGQKGYHHRTELNKKIYRIGAGIHSKDGKIVKNSGSTEYDNTEKT 300

Query: 294 LSSLMGSF 301
           ++  MG F
Sbjct: 301 VTP-MGGF 307


>gi|363751473|ref|XP_003645953.1| hypothetical protein Ecym_4055 [Eremothecium cymbalariae
           DBVPG#7215]
 gi|356889588|gb|AET39136.1| hypothetical protein Ecym_4055 [Eremothecium cymbalariae
           DBVPG#7215]
          Length = 387

 Score =  379 bits (973), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 200/315 (63%), Positives = 250/315 (79%), Gaps = 18/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHG LGFLPRKRA+  RG+VK+FPKDD SKP  LT+FLGYKAGMT IVRD+
Sbjct: 1   MSHRKYEAPRHGHLGFLPRKRAASIRGRVKSFPKDDKSKPVALTSFLGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK HK+E  EAVT+++TPP+VVVGVVGYV+TPRGLRSL TVWA+HL+++++RRFYK
Sbjct: 61  DRPGSKFHKREIVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDDLKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY+ KY  D     ++ +L +MKKY TVIR              K+AHL
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDG--TAVEKELARMKKYATVIRVLAHTQIRKTPLAQKRAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQ+NGGS+++KVD+A   FEK + +D+VF+++EMID++ VTKG G+EGV  RWG  +L
Sbjct: 179 AEIQLNGGSISEKVDWAREHFEKTVSVDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKKL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPA V +TVARAGQNGYHHRT +N KIY++GK   E ++A TE
Sbjct: 239 PRKTHRGLRKVACIGAWHPAHVMWTVARAGQNGYHHRTSINHKIYRIGKGDDEGNAA-TE 297

Query: 287 FDRSVYLLSSLMGSF 301
           FDR+   ++  MG F
Sbjct: 298 FDRTKKTITP-MGGF 311


>gi|50755665|ref|XP_414843.1| PREDICTED: ribosomal protein L3-like [Gallus gallus]
          Length = 407

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 191/319 (59%), Positives = 240/319 (75%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSH KF  PRHG LGFLP KR+ RHRGKVK +PKDDPSKP  LTAF+GYKAGMTH +R+V
Sbjct: 1   MSHHKFSAPRHGHLGFLPHKRSRRHRGKVKTWPKDDPSKPVHLTAFMGYKAGMTHTLREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
            +PG ++ K+E  EAVTIIETPP+VVVGVVGY+ TP+GLR+  TV+A+H+++E RRRFYK
Sbjct: 61  HRPGLRISKREEVEAVTIIETPPMVVVGVVGYIDTPKGLRNFKTVFAEHISDECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ +DGKK ++     MKKYC VIR              KKAH+
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFAAMKKYCKVIRVIMHTQMKLLPLRQKKAHV 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG+VA+KVD+     EKQI + +VF ++EMID+IGVTKG G +GV +RW   +L
Sbjct: 181 MEIQLNGGTVAEKVDWVRERLEKQISVHSVFSQNEMIDVIGVTKGHGMKGVTSRWHSKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------ 280
           PRKTH+GLRKVACIGAWHPARV ++VARAGQ GYHHRTE+NKKI+++G            
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVGYSVARAGQKGYHHRTELNKKIFRIGHGIHVEDGKVVK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T +D +   ++ L G
Sbjct: 301 NNASTNYDVTEKTITPLGG 319


>gi|149620465|ref|XP_001511933.1| PREDICTED: 60S ribosomal protein L3-like [Ornithorhynchus anatinus]
          Length = 342

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 186/290 (64%), Positives = 230/290 (79%), Gaps = 14/290 (4%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHG LGFLP KR+ RHRG+VK++PKDDP KP  LTAFLGYKAGMTH +R+V
Sbjct: 8   MSHRKFSAPRHGHLGFLPHKRSRRHRGRVKSWPKDDPKKPVHLTAFLGYKAGMTHTLREV 67

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
            +PG K+ K+E  EAVTI+ETPP+VVVGVVGYV TPRGLR+  T++A+HL++E RRRFYK
Sbjct: 68  HRPGLKVSKREEVEAVTIVETPPMVVVGVVGYVDTPRGLRNFKTIFAEHLSDECRRRFYK 127

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++  DGKK ++     MKKYC +IR              KKA +
Sbjct: 128 NWHKSKKKAFTKYCKKWQDADGKKRLEKDFASMKKYCKIIRVIVHTQMKLLAFRQKKADV 187

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           ME+Q+NGGSV+ KVD+A G  EK +P+ AVF ++EM+D+I VTKG+G +GV +RW   +L
Sbjct: 188 MEVQLNGGSVSDKVDWARGHLEKAVPVQAVFSQNEMVDVIAVTKGRGMKGVTSRWHAKKL 247

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA 276
           PRKTH+GLRKVACIGAWHPARV +++ARAGQ GYHHRTE+NKKIY+LG+ 
Sbjct: 248 PRKTHKGLRKVACIGAWHPARVGYSIARAGQKGYHHRTEINKKIYRLGRG 297


>gi|193787392|dbj|BAG52598.1| unnamed protein product [Homo sapiens]
          Length = 354

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 187/305 (61%), Positives = 229/305 (75%), Gaps = 41/305 (13%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK   PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKSSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  TV+A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKV 180
           NW KSK                                   KKAHLMEIQVNGG+VA+K+
Sbjct: 121 NWHKSK-----------------------------------KKAHLMEIQVNGGTVAEKL 145

Query: 181 DFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACI 240
           D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW   +LPRKTHRGLRKVA I
Sbjct: 146 DWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVARI 205

Query: 241 GAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQESHSAMTEFDRSVYLL 294
           GAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           ++A T++D S   +
Sbjct: 206 GAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSI 265

Query: 295 SSLMG 299
           + L G
Sbjct: 266 NPLGG 270


>gi|449269423|gb|EMC80192.1| 60S ribosomal protein L3-like protein, partial [Columba livia]
          Length = 407

 Score =  377 bits (967), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 193/318 (60%), Positives = 240/318 (75%), Gaps = 20/318 (6%)

Query: 2   SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
           SHRKF  PRHG LGFLP KR+ RHRGKVK +PKDDPSKP  LTAFLGYKAGMTH VR+V 
Sbjct: 2   SHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPKDDPSKPVHLTAFLGYKAGMTHTVREVH 61

Query: 62  KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
           +PG KL K+E  EAVTIIETPP+VVVGVVGYV+TP+GLR+  TV+A+H+++E RRRFYKN
Sbjct: 62  RPGLKLSKREEVEAVTIIETPPMVVVGVVGYVETPKGLRNFKTVFAEHISDECRRRFYKN 121

Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLM 167
           W KSKKKAFTKY KK++ +DGK+ ++     MKKYC VIR              KKAH+M
Sbjct: 122 WHKSKKKAFTKYCKKWQDEDGKRQLEKDFAAMKKYCKVIRVIVHTQMKLLPLRQKKAHVM 181

Query: 168 EIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 227
           EIQ+NGG+V +KVD+     EKQ+ + +VF ++EMID+IGVTKG G +GV +RW   +LP
Sbjct: 182 EIQLNGGTVPEKVDWVRERLEKQVSVHSVFSQNEMIDVIGVTKGHGMKGVTSRWHTKKLP 241

Query: 228 RKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------H 281
           RKTH+GLRKVACIGAWHPARV +++ARAGQ GYHHRTE+NKKIY++G            +
Sbjct: 242 RKTHKGLRKVACIGAWHPARVGYSIARAGQKGYHHRTELNKKIYRIGHGIHVEDGKVVKN 301

Query: 282 SAMTEFDRSVYLLSSLMG 299
           +A T +D +   ++ L G
Sbjct: 302 NASTHYDVTEKTITPLGG 319


>gi|410078898|ref|XP_003957030.1| hypothetical protein KAFR_0D02480 [Kazachstania africana CBS 2517]
 gi|372463615|emb|CCF57895.1| hypothetical protein KAFR_0D02480 [Kazachstania africana CBS 2517]
          Length = 387

 Score =  377 bits (967), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 199/315 (63%), Positives = 246/315 (78%), Gaps = 18/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHG LGFLPRKRA   RG+VK+FPKDD SKP  LT+FLGYKAGMT IVRD+
Sbjct: 1   MSHRKFEAPRHGHLGFLPRKRAVSVRGRVKSFPKDDQSKPVALTSFLGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK HK+E  EAVT+++ P +VVVGVVGYV+TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGSKFHKREIVEAVTVVDAPAVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY+ KY  D     I+ +L +++KY TVIR              KKAHL
Sbjct: 121 NWYKSKKKAFTKYSTKYAQDGAA--IEKELARLRKYATVIRVLVHTQVRKTPLAQKKAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQ+NGGS+++K+D+A   FEK + +D+VF+++EMID++ VTKG G+EGV  RWG  +L
Sbjct: 179 AEIQLNGGSISEKIDWAREHFEKTVSVDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKKL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPA V +TVARAGQNGYHHRT +N KIY++GK   E+ +A T 
Sbjct: 239 PRKTHRGLRKVACIGAWHPAHVMWTVARAGQNGYHHRTSINHKIYRIGKGDDEA-NASTS 297

Query: 287 FDRSVYLLSSLMGSF 301
           FDR+   ++  MG F
Sbjct: 298 FDRTKKTITP-MGGF 311


>gi|296424388|ref|XP_002841730.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295637978|emb|CAZ85921.1| unnamed protein product [Tuber melanosporum]
          Length = 640

 Score =  376 bits (965), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 178/292 (60%), Positives = 228/292 (78%), Gaps = 17/292 (5%)

Query: 22  ASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIET 81
           +++ RGKVK+FPKDD  KP  LTA LGYKAGMT IVRD+++PG+K+HKKE  EAVT+IET
Sbjct: 272 SAQTRGKVKSFPKDDTKKPVHLTAALGYKAGMTTIVRDLDRPGAKMHKKEVVEAVTVIET 331

Query: 82  PPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDD 141
           PP+V+VGVVGYV+TPRGLRSL TVWA+HL+++++RRFYKNW KSKKKAFTKY K++  + 
Sbjct: 332 PPMVIVGVVGYVETPRGLRSLTTVWAEHLSDDLKRRFYKNWYKSKKKAFTKYAKRHAGEG 391

Query: 142 GKKDIQAQLEKMKKYCTVIR--------------KKAHLMEIQVNGGSVAQKVDFAYGFF 187
             K I  +L ++KKYCTV+R              KK HLMEIQVNGGS+  KVDFA+  F
Sbjct: 392 --KAISHELGRIKKYCTVVRVLAHSQIRKTPLKQKKTHLMEIQVNGGSITDKVDFAFSHF 449

Query: 188 EKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPAR 247
           EK++ I ++F++DEMID+I VTKG G+ GV +RWG  +LPRKTH+GLRKVACIGAWHP+ 
Sbjct: 450 EKEVTISSIFEQDEMIDVIAVTKGHGFNGVTSRWGTKKLPRKTHKGLRKVACIGAWHPSH 509

Query: 248 VSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRSVYLLSSLMG 299
           V +TVARAGQ+GYHHRT +N KIY++G  + E + A TEFD +   ++ L G
Sbjct: 510 VQWTVARAGQDGYHHRTSVNHKIYRIGSGTDEGN-ASTEFDITKKTITPLGG 560


>gi|290991133|ref|XP_002678190.1| ribosomal protein L3 [Naegleria gruberi]
 gi|284091801|gb|EFC45446.1| ribosomal protein L3 [Naegleria gruberi]
          Length = 416

 Score =  376 bits (965), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 195/319 (61%), Positives = 237/319 (74%), Gaps = 19/319 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSLGFLPRK+A R RG+VKAFPKDD  K   LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEAPRHGSLGFLPRKKARRERGRVKAFPKDDQKKATHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
            KPGSK+HKKE  +AVTIIE PP+VVVGVVGY +TP GL+++ TVWA++++ E RR +YK
Sbjct: 61  NKPGSKMHKKEGLDAVTIIEAPPMVVVGVVGYKQTPTGLKAIGTVWAKNISNEFRRVYYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
           +WC+SKK+AFTK TK Y     ++     LE  KK   VIR               KKAH
Sbjct: 121 DWCRSKKRAFTKLTKTYLEQAAQEKRTQALESFKKNADVIRIVAHTQPSKVTATNNKKAH 180

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           + EIQVNGG+V +K+ FA    EK + +D+VF KDE ID+I V+KGKG +GVV+RWGV R
Sbjct: 181 VAEIQVNGGTVDEKIKFAVANLEKLVSVDSVFAKDEPIDVIAVSKGKGTKGVVSRWGVRR 240

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESH---S 282
           LPRKTHRGLRKVACIGAWHPARVSF+VARAGQ G+ HR   NKKIY++GK+++      S
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFSVARAGQKGFFHRVHQNKKIYRIGKSNKTEEGKKS 300

Query: 283 AMTEFDRSVYLLSSLMGSF 301
           AMT+FD +   ++  MG F
Sbjct: 301 AMTDFDLTEKDVNP-MGGF 318


>gi|255717332|ref|XP_002554947.1| 60S ribosomal protein L3 [Lachancea thermotolerans]
 gi|238936330|emb|CAR24510.1| KLTH0F17556p [Lachancea thermotolerans CBS 6340]
          Length = 388

 Score =  376 bits (965), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 193/315 (61%), Positives = 241/315 (76%), Gaps = 18/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHG LGFLPRKRA+  RGKV++FPKDD SK   LT+FLGYKAGM+ IVRD+
Sbjct: 1   MSHRKYEAPRHGHLGFLPRKRAASIRGKVRSFPKDDKSKSVALTSFLGYKAGMSTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK HK+E  EAVT+++TPP+VVVGVVGYV+TPRGLRSL TVWA+HL++E++RRFYK
Sbjct: 61  DRPGSKFHKREIVEAVTVVDTPPMVVVGVVGYVETPRGLRSLTTVWAEHLSDEIKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY+ KY  D     I+ +L ++ KY TV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDGAA--IERELARISKYATVVRVLAHTQVRKTPLAQKKAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQ+NGGS A KV +A   FEK + +D+VF+++EMID+  VTKG G+EGV  RWG  +L
Sbjct: 179 AEIQINGGSTADKVAWAREHFEKTVSVDSVFEQNEMIDVCAVTKGHGFEGVTHRWGTKKL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPA V ++VARAGQ G+H RT +N K+Y++GK   E  +A TE
Sbjct: 239 PRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGFHTRTSINHKVYRVGKGGDEG-NASTE 297

Query: 287 FDRSVYLLSSLMGSF 301
           FDR+   ++  MG F
Sbjct: 298 FDRTKKSITP-MGGF 311


>gi|443896762|dbj|GAC74105.1| inorganic phosphate transporter [Pseudozyma antarctica T-34]
          Length = 525

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 178/284 (62%), Positives = 221/284 (77%), Gaps = 16/284 (5%)

Query: 30  KAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGV 89
           + FPKDDP KP  LTA +GYKAGMTHIVRD+++PGSK+HKKE  EAVT+IETPP+V VGV
Sbjct: 164 RNFPKDDPKKPVHLTAMIGYKAGMTHIVRDLDRPGSKMHKKEIVEAVTVIETPPMVAVGV 223

Query: 90  VGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQ 149
           VGYV+TPRGLRSL TVWA+HL++EV+RRFYKNW +SKKKAFTKY KK+  ++G   I  +
Sbjct: 224 VGYVETPRGLRSLTTVWAEHLSDEVKRRFYKNWYRSKKKAFTKYAKKHSENNGSS-ISRE 282

Query: 150 LEKMKKYCTVIR--------------KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDA 195
           LE++KKYCTV+R              KK+HLMEIQ+NGGSVA KVDFA   FEK   + +
Sbjct: 283 LERIKKYCTVVRVLAHTQVRKTGLKQKKSHLMEIQINGGSVADKVDFAKEHFEKTFDVKS 342

Query: 196 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARA 255
           VF+++E+ID+I VTKG GYEGV  RWG  +LPRKTHRGLRK+ACIGAWHPA V FTVAR+
Sbjct: 343 VFEQNEIIDVIAVTKGHGYEGVTARWGTKKLPRKTHRGLRKIACIGAWHPANVMFTVARS 402

Query: 256 GQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRSVYLLSSLMG 299
           GQ+GYHHRTE+ KKIY++    ++  S  T+FD +   ++ L G
Sbjct: 403 GQDGYHHRTEIGKKIYRISNG-EDKTSGSTDFDTTEKTITPLGG 445


>gi|366992279|ref|XP_003675905.1| hypothetical protein NCAS_0C05510 [Naumovozyma castellii CBS 4309]
 gi|342301770|emb|CCC69541.1| hypothetical protein NCAS_0C05510 [Naumovozyma castellii CBS 4309]
          Length = 387

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 198/315 (62%), Positives = 248/315 (78%), Gaps = 18/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHG LGFLPRKRA   RG+VK+FPKDD +KP  LT+FLGYKAGMT IVRD+
Sbjct: 1   MSHRKFEAPRHGHLGFLPRKRAVSVRGRVKSFPKDDKTKPVALTSFLGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK HK+E  EAVT+++TPP+VVVGVVGYV+TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGSKFHKREIVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY+ KY  D    +I+ +L +++KY +V+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDGA--EIEKELARIRKYASVVRVLVHTQVRKTPLVQKKAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQ+NGGS+++KVD+A   FEK + +DAVF+++EMID++ VTKG G+EGV  RWG  +L
Sbjct: 179 AEIQLNGGSISEKVDWAREHFEKTVAVDAVFEQNEMIDVVAVTKGHGFEGVTHRWGTKKL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPA V +TVARAGQ GYHHRT +N K+Y++GK   +S +A T 
Sbjct: 239 PRKTHRGLRKVACIGAWHPAHVMWTVARAGQRGYHHRTSINHKVYRIGKGDDDS-NASTN 297

Query: 287 FDRSVYLLSSLMGSF 301
           FDR+   ++  MG F
Sbjct: 298 FDRTKKTITP-MGGF 311


>gi|449017686|dbj|BAM81088.1| 60S ribosomal protein L3 [Cyanidioschyzon merolae strain 10D]
          Length = 390

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 183/315 (58%), Positives = 237/315 (75%), Gaps = 21/315 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDD-PSKPCRLTAFLGYKAGMTHIVRD 59
           MSHRK+E PRHGSLGFLPR R  RHRG+V+++P+D  P+ P  LTAF   KAG TH+VR 
Sbjct: 1   MSHRKYEAPRHGSLGFLPRGRTKRHRGRVRSWPRDPGPAVPPHLTAFPVVKAGCTHVVRQ 60

Query: 60  VEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFY 119
           +++PGSK+HKKE  E VTI+E PP+V+ G+VGY +TPRGLR++ TV+A+HLN+EV+RRFY
Sbjct: 61  IDRPGSKVHKKEVAEPVTILEAPPIVICGIVGYSETPRGLRAIRTVFAEHLNDEVKRRFY 120

Query: 120 KNWCKSKKKAFTKYT-KKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKA 164
           KNW ++KKKAFTKY   KY   + + D    L+ ++++C+V+R              KKA
Sbjct: 121 KNWYRAKKKAFTKYALAKYSMGEYRND----LDTIRRHCSVVRVIAHTQQRKFRLRQKKA 176

Query: 165 HLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 224
           H++EIQ+NGG++ +KVDFA    EK + ID V   DEM+D IGVT+GKG+EGVVTR+GV 
Sbjct: 177 HILEIQINGGTIPEKVDFAERLLEKTVSIDDVISNDEMVDTIGVTRGKGFEGVVTRFGVR 236

Query: 225 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAM 284
           RLPRKTHRGLRKVACIGAWHPARV FTV RAGQ GYHHRT+MN K+Y++GK   +  SA 
Sbjct: 237 RLPRKTHRGLRKVACIGAWHPARVQFTVPRAGQRGYHHRTQMNLKVYRIGKKG-DGKSAT 295

Query: 285 TEFDRSVYLLSSLMG 299
           TE+D +   ++ L G
Sbjct: 296 TEYDLTEKGITPLGG 310


>gi|448087719|ref|XP_004196395.1| Piso0_005857 [Millerozyma farinosa CBS 7064]
 gi|359377817|emb|CCE86200.1| Piso0_005857 [Millerozyma farinosa CBS 7064]
          Length = 389

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 196/315 (62%), Positives = 248/315 (78%), Gaps = 18/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSLGFLPRKRA++ RG+VK+FPKD  SKP  LTAFLGYKAGMT IVRD+
Sbjct: 1   MSHRKYEAPRHGSLGFLPRKRAAKQRGRVKSFPKDVKSKPVSLTAFLGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  EA T+++TPP+VVVGVVGYV+TPRGLRSL TVWA+HL+EE++RRFYK
Sbjct: 61  DRPGSKVHKREIVEAATVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSEEIKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY+ KY  D  +  ++ +L ++KKY +V+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDATQ--VERELARIKKYASVVRVLVHTQIKKTPLSQKKAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQVNGGS++ KVD+A   FEK + +D+VF+++EM+D I VTKG+G EGV  RWG  +L
Sbjct: 179 AEIQVNGGSISDKVDWAKEHFEKTVSVDSVFEQNEMVDAIAVTKGRGIEGVTHRWGTKKL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIG+WHPA V ++V RAGQ+GYHHRT +N K+Y++G    ES+ A TE
Sbjct: 239 PRKTHRGLRKVACIGSWHPANVQWSVPRAGQDGYHHRTSINHKVYRVGSGEDESNGA-TE 297

Query: 287 FDRSVYLLSSLMGSF 301
           FDR+   ++  MG F
Sbjct: 298 FDRTKKTINP-MGGF 311


>gi|301769703|ref|XP_002920231.1| PREDICTED: 60S ribosomal protein L3-like [Ailuropoda melanoleuca]
          Length = 444

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 192/319 (60%), Positives = 240/319 (75%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHG LGFLP KR+ RHRGKVK +P+DDPS+P  LTAFLGYKAGMTH +R+V
Sbjct: 38  MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSRPVHLTAFLGYKAGMTHTLREV 97

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
            +PG K+ K+E  EAVTI+ETPPLVVVGVVGYV TPRGLRS  T++A+HL++E RRRFYK
Sbjct: 98  HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 157

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           +W KSKKKAFTK  K++   DGKK +Q  L  MKKYC VIR              KKAH+
Sbjct: 158 DWHKSKKKAFTKACKRWRDADGKKQLQRDLAAMKKYCKVIRVIVHTQMKLLPFRQKKAHI 217

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG+VA+KV +A    EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW   +L
Sbjct: 218 MEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKL 277

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------ 280
           PRKTH+GLRKVACIGAWHPARV  ++ARAGQ GYHHRTE+NKKIY++G+   +       
Sbjct: 278 PRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHKEDGKVVK 337

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T +D +   ++ L G
Sbjct: 338 NNASTSYDVTDKSITPLGG 356


>gi|345317852|ref|XP_001514408.2| PREDICTED: 60S ribosomal protein L3 [Ornithorhynchus anatinus]
          Length = 378

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 179/289 (61%), Positives = 228/289 (78%), Gaps = 20/289 (6%)

Query: 31  AFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVV 90
           AF +DDP+KP  LTAFLGYKAGMTHIVR+V++PGSK++KKE  EAVTI+ETPP+V+VG+V
Sbjct: 6   AFYQDDPTKPIHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVIVGIV 65

Query: 91  GYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQL 150
           GYV+TPRGLR+  T++A+H+++E +RRFYKNW KSKKKAFTKY KK++ ++GKK ++   
Sbjct: 66  GYVQTPRGLRTFKTIFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDEEGKKQLEKDF 125

Query: 151 EKMKKYCTVIR--------------KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAV 196
             MKKYC VIR              KK+HLMEIQVNGGS+A+KVD+A    E+Q+P+  V
Sbjct: 126 NSMKKYCQVIRVIAHTQMRVLPLRQKKSHLMEIQVNGGSIAEKVDWAREKLEQQVPVATV 185

Query: 197 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAG 256
           F +DEMID+IGVTKGKGY+GV +RW   +LPRKTHRGLRKVACIGAWHPARV+F+VARAG
Sbjct: 186 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAG 245

Query: 257 QNGYHHRTEMNKKIYKLGKASQ------ESHSAMTEFDRSVYLLSSLMG 299
           Q GYHHRTE+NKKIYK+G+  Q        ++A T++D S   ++ L G
Sbjct: 246 QKGYHHRTEINKKIYKIGQGYQIKDGKLIKNNASTDYDLSDKSINPLGG 294


>gi|340503599|gb|EGR30155.1| ribosomal protein, putative [Ichthyophthirius multifiliis]
          Length = 388

 Score =  374 bits (960), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 188/313 (60%), Positives = 239/313 (76%), Gaps = 19/313 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PR GSLGF PR+R   HRG+ +AFP+DD SK   LTAF G+KAGMTHI+RDV
Sbjct: 1   MSHRKFEAPRRGSLGFRPRRRTRHHRGRCRAFPRDDASKKSHLTAFTGFKAGMTHILRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           E+PGSK HKKE  EAVT+IE PP+ VVG+VGY+ TPRGLR+LCTVW + L++  +RRFYK
Sbjct: 61  ERPGSKNHKKEVVEAVTVIECPPMTVVGLVGYINTPRGLRALCTVWTKTLDKNTKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW  SKKKAFT    K+ET+  +K+    + ++KKYCTV+R              KK H+
Sbjct: 121 NWTNSKKKAFT----KHETNFNQKEQDILINRIKKYCTVVRVIAHTNMNKLNFRQKKNHI 176

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           +EIQVNGG+VAQKV+FA G FEK++ +D +FQ++EMID+IGVTKGKG+ GVV R+GV  L
Sbjct: 177 LEIQVNGGTVAQKVEFAKGLFEKEVTVDQLFQENEMIDVIGVTKGKGFAGVVKRFGVKHL 236

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
            +KTHRG RKV CIGAWHP+R+ FTVARAGQ GYHHRTE+NKK+Y++GK  Q++ +A T+
Sbjct: 237 QKKTHRGYRKVGCIGAWHPSRIRFTVARAGQLGYHHRTEINKKVYRVGKGDQKN-NASTQ 295

Query: 287 FDRSVYLLSSLMG 299
            D +   ++ L G
Sbjct: 296 GDLTDKQITPLGG 308


>gi|402907275|ref|XP_003916403.1| PREDICTED: 60S ribosomal protein L3-like [Papio anubis]
          Length = 407

 Score =  373 bits (958), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 191/319 (59%), Positives = 238/319 (74%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHG LGFLP KR+ RHRGKVK +P+DDPS+P  LTAFLGYKAGMTH +R+V
Sbjct: 1   MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
            +PG K+ K+E  EAVTI+ETPPLVVVGVVGYV TPRGLRS  T++A+HL++E RRRFYK
Sbjct: 61  HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           +W KSKKKAFTK  K++   DGKK +Q     MKKYC VIR              KKAH+
Sbjct: 121 DWHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG+VA+KV +A    EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW   +L
Sbjct: 181 MEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------ 280
           PRKTH+GLRKVACIGAWHPARV  ++ARAGQ GYHHRTE+NKKIY++G+           
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHMEDGKLVK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T +D +   ++ L G
Sbjct: 301 NNASTSYDVTAKSITPLGG 319


>gi|145475213|ref|XP_001423629.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|145532966|ref|XP_001452233.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124390690|emb|CAK56231.1| unnamed protein product [Paramecium tetraurelia]
 gi|124419921|emb|CAK84836.1| unnamed protein product [Paramecium tetraurelia]
          Length = 393

 Score =  373 bits (958), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 176/313 (56%), Positives = 230/313 (73%), Gaps = 18/313 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHG+LGF PRKR   HRG+++AFPKD+ S P  LTAF G+KAGMTHI+R V
Sbjct: 1   MSHRKFEAPRHGNLGFTPRKRTKHHRGRIRAFPKDNKSSPVHLTAFAGFKAGMTHILRTV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           E+PGSKL+ KE  EAVTI+ETPPL VVG+VGY++TPRGLR+L TVW+  + ++  RRFYK
Sbjct: 61  ERPGSKLNGKEVVEAVTIVETPPLAVVGIVGYIETPRGLRALTTVWSTKIAKDTLRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW  SKKKAFT Y K    +   K+++ QL+++ KYC V+R              KK H+
Sbjct: 121 NWINSKKKAFTNYNK---ANAEPKNLETQLKRIVKYCQVVRVIVHTQMSKLNLRQKKNHV 177

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            E+QVNGG+  QKV++A G  EK++ +D VF+++E ID++GVTKGKG  GV+ R+GV  L
Sbjct: 178 FEVQVNGGTTEQKVNYAKGLLEKEVKVDQVFKQNEQIDVLGVTKGKGVAGVIKRFGVKHL 237

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
            +KTHRG R+V CIG WHPA V ++VAR GQ GYHHRTEMNKKIY++G A+ + ++A TE
Sbjct: 238 QKKTHRGWRRVGCIGGWHPANVRYSVARTGQLGYHHRTEMNKKIYRIG-AAGDKNTASTE 296

Query: 287 FDRSVYLLSSLMG 299
            D +   ++ L G
Sbjct: 297 ADLTSKAITPLGG 309


>gi|334333850|ref|XP_001366065.2| PREDICTED: 60S ribosomal protein L3-like [Monodelphis domestica]
          Length = 431

 Score =  373 bits (958), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 183/288 (63%), Positives = 228/288 (79%), Gaps = 14/288 (4%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           +SHRKF  PRHG LGFLP+KR+ RHRGKVK +P+DDPSKP  LTAFLGYKAGMTH +R+V
Sbjct: 24  ISHRKFSAPRHGHLGFLPQKRSRRHRGKVKTWPRDDPSKPVHLTAFLGYKAGMTHTLREV 83

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
            +PG K+ K+E  EAVTI+ETPP++VVG+VGYV TPRGLRS  T++A+HL++E RRRFYK
Sbjct: 84  HRPGLKISKREEVEAVTIVETPPVIVVGIVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 143

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTK  +K+  DDGKK +Q     MKKYC VIR              KKAH+
Sbjct: 144 NWYKSKKKAFTKACQKWRDDDGKKRLQKDFASMKKYCKVIRVIVHTQMKLLPFRQKKAHI 203

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG++A+KV++A    EKQ+ +  VF + E+ID+I VTKG+G +GV +RW   +L
Sbjct: 204 MEIQLNGGTIAEKVEWARARLEKQVSVHTVFSQSEVIDVIAVTKGRGMKGVTSRWHAKKL 263

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLG 274
           PRKTH+GLRKVACIGAWHPARV +++ARAGQ GYHHRTE+NKKIY++G
Sbjct: 264 PRKTHKGLRKVACIGAWHPARVGYSIARAGQKGYHHRTELNKKIYRIG 311


>gi|50288047|ref|XP_446452.1| 60S ribosomal protein L3 [Candida glabrata CBS 138]
 gi|74661344|sp|Q6FTJ2.1|RL3_CANGA RecName: Full=60S ribosomal protein L3
 gi|49525760|emb|CAG59379.1| unnamed protein product [Candida glabrata]
          Length = 387

 Score =  372 bits (956), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 199/315 (63%), Positives = 248/315 (78%), Gaps = 18/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHG LGFLPRKRA+  RG+VK+FPKDD SKP  LT+FLGYKAGMT IVRD+
Sbjct: 1   MSHRKYEAPRHGHLGFLPRKRAASVRGRVKSFPKDDKSKPVALTSFLGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK HK+E  EAVT+++TPP+VVVGVVGYV+TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGSKFHKREIVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY+ KY  +    +I+ +L ++KKY TV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYSAKYAQNGA--EIERELARIKKYATVVRVLVHTQVRKTPLVQKKAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQ+NGGS+++KVD+A   FEK + +D+VF+++EMID I VTKG G+EGV  RWG  +L
Sbjct: 179 AEIQLNGGSISEKVDWAREHFEKTVSVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPA V ++VARAGQ GYHHRT +N KIY++GK   E ++A T 
Sbjct: 239 PRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHHRTSINHKIYRIGKGDDEGNAA-TN 297

Query: 287 FDRSVYLLSSLMGSF 301
           FDR+   ++  MG F
Sbjct: 298 FDRTKKTINP-MGGF 311


>gi|406605586|emb|CCH43019.1| 60S ribosomal protein L3 [Wickerhamomyces ciferrii]
          Length = 389

 Score =  372 bits (956), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 195/313 (62%), Positives = 249/313 (79%), Gaps = 16/313 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSLGFLPRKRA+  RG+VK+FP+DD +KP  LTA LGYKAGM+ IVRD+
Sbjct: 1   MSHRKYEAPRHGSLGFLPRKRAASIRGRVKSFPRDDKTKPVHLTATLGYKAGMSTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  EAVT+++TPP+VVVGVVGYV+TPRGLRSL TVWA+HL++E++RRFYK
Sbjct: 61  DRPGSKMHKREIVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEIKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY  KY   +G++ I+ +L ++ KY TV+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYAAKYANKNGEQ-IERELARITKYATVVRVLVHTQVKKTPLVQKKAHL 179

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQVNGGS+A KV++A   FEK + +D+V +++E ID+I VTKG G+EGV  RWG TRL
Sbjct: 180 AEIQVNGGSIADKVNWAREHFEKTVSVDSVIEQNENIDVIAVTKGHGFEGVTHRWGTTRL 239

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHP+ V +TVARAGQNGYH RT +N K+Y++G+   E+++A TE
Sbjct: 240 PRKTHRGLRKVACIGAWHPSHVQWTVARAGQNGYHSRTSINHKVYRVGRGDDEANAA-TE 298

Query: 287 FDRSVYLLSSLMG 299
           FDR+   ++ L G
Sbjct: 299 FDRTKKTITPLGG 311


>gi|4826988|ref|NP_005052.1| 60S ribosomal protein L3-like [Homo sapiens]
 gi|397472395|ref|XP_003807730.1| PREDICTED: 60S ribosomal protein L3-like [Pan paniscus]
 gi|426380751|ref|XP_004057025.1| PREDICTED: 60S ribosomal protein L3-like [Gorilla gorilla gorilla]
 gi|2500230|sp|Q92901.3|RL3L_HUMAN RecName: Full=60S ribosomal protein L3-like
 gi|1638884|gb|AAC50777.1| ribosomal protein L3-like [Homo sapiens]
 gi|30046542|gb|AAH50413.1| Ribosomal protein L3-like [Homo sapiens]
 gi|119606005|gb|EAW85599.1| ribosomal protein L3-like [Homo sapiens]
          Length = 407

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/319 (59%), Positives = 238/319 (74%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHG LGFLP KR+ RHRGKVK +P+DDPS+P  LTAFLGYKAGMTH +R+V
Sbjct: 1   MSHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
            +PG K+ K+E  EAVTI+ETPPLVVVGVVGYV TPRGLRS  T++A+HL++E RRRFYK
Sbjct: 61  HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           +W KSKKKAFTK  K++   DGKK +Q     MKKYC VIR              KKAH+
Sbjct: 121 DWHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG+VA+KV +A    EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW   +L
Sbjct: 181 MEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------ 280
           PRKTH+GLRKVACIGAWHPARV  ++ARAGQ GYHHRTE+NKKI+++G+           
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIFRIGRGPHMEDGKLVK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T +D +   ++ L G
Sbjct: 301 NNASTSYDVTAKSITPLGG 319


>gi|189053728|dbj|BAG35980.1| unnamed protein product [Homo sapiens]
          Length = 407

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 189/319 (59%), Positives = 237/319 (74%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHG LGFLP KR+ RHRGKVK +P+DDPS+P  LTAFLGYKAGMTH +R+V
Sbjct: 1   MSHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
            +PG K+ K+E  EAVTI+ETPPLV VGVVGYV TPRGLRS  T++A+HL++E RRRFYK
Sbjct: 61  HRPGLKISKREEVEAVTIVETPPLVAVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           +W KSKKKAFTK  K++   DGKK +Q     MKKYC VIR              KKAH+
Sbjct: 121 DWHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG+VA+KV +A    EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW   +L
Sbjct: 181 MEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------ 280
           PRKTH+GLRKVACIGAWHPARV  ++ARAGQ GYHHRTE+NKKI+++G+           
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIFRIGRGPHMEDGKLVK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T +D +   ++ L G
Sbjct: 301 NNASTSYDVTAKSITPLGG 319


>gi|124802670|ref|XP_001347556.1| 60S ribosomal protein L3, putative [Plasmodium falciparum 3D7]
 gi|23495138|gb|AAN35469.1| 60S ribosomal protein L3, putative [Plasmodium falciparum 3D7]
          Length = 386

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 186/315 (59%), Positives = 229/315 (72%), Gaps = 21/315 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSLGFLPRKR  R RGK+++FPKDD  KP   TAF+GYKAGMTHIVR+V
Sbjct: 1   MSHRKFERPRHGSLGFLPRKRCKRLRGKIRSFPKDDKEKPPHFTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           +KPGSKLHKKE  EA TIIE  P+VVVG+VGY +TP+GLR L TVWA H+++E RRR+YK
Sbjct: 61  DKPGSKLHKKEIVEACTIIECAPMVVVGIVGYRETPKGLRILSTVWANHVSDEFRRRYYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KS+KKAFTK     E           L++++KYCTV+R              KKAH+
Sbjct: 121 NWYKSEKKAFTKSLNVPEATK-----NCLLKRIEKYCTVLRAICHTQPSKTPLRMKKAHI 175

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           ME+Q+NGGS+ +K++F     EK +P+  VF  +EMID+I VTKG G +GVV+R+GV RL
Sbjct: 176 MEVQINGGSMKEKLEFVKEMLEKNLPVSTVFNPNEMIDVISVTKGHGTKGVVSRYGVKRL 235

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPARV F + R GQ GY HRTE NKKIY++G    + +SA T+
Sbjct: 236 PRKTHRGLRKVACIGAWHPARVQFQIPRHGQKGYFHRTERNKKIYRIG-LKTDKNSASTD 294

Query: 287 FDRSVYLLSSLMGSF 301
            D +   ++  MG F
Sbjct: 295 ADITEKKITP-MGGF 308


>gi|403273327|ref|XP_003928470.1| PREDICTED: 60S ribosomal protein L3-like [Saimiri boliviensis
           boliviensis]
          Length = 407

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/319 (59%), Positives = 238/319 (74%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHG LGFLP KR+ RHRGKVK +P+DDPS+P  LTAFLGYKAGMTH +R+V
Sbjct: 1   MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
            +PG K+ K+E  EAVTI+ETPPLVVVGVVGYV TPRGLRS  T++A+HL++E RRRFYK
Sbjct: 61  HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           +W KSKKKAFTK  K++   DGK+ +Q     MKKYC VIR              KKAH+
Sbjct: 121 DWHKSKKKAFTKACKRWRDTDGKEQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG+VA+KV +A    EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW   +L
Sbjct: 181 MEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------ 280
           PRKTH+GLRKVACIGAWHPARV  ++ARAGQ GYHHRTE+NKKIY++G+           
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHMEDGKLVK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T +D +   ++ L G
Sbjct: 301 NNASTNYDVTAKSITPLGG 319


>gi|443922217|gb|ELU41693.1| 60S ribosomal protein L3 [Rhizoctonia solani AG-1 IA]
          Length = 381

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 175/280 (62%), Positives = 223/280 (79%), Gaps = 16/280 (5%)

Query: 34  KDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYV 93
           +DDP KP  LTA +GYKAGMTHIVRD+++PGSK+HK+E  EAV+IIETPPL+VVGVVGYV
Sbjct: 27  QDDPKKPVHLTATMGYKAGMTHIVRDLDRPGSKMHKREVVEAVSIIETPPLIVVGVVGYV 86

Query: 94  KTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKM 153
           +TPRGLR+L TVWA HL++EV+RRFYKNW +SKKKAFT+Y KK   ++G K  Q +LE++
Sbjct: 87  ETPRGLRTLTTVWANHLSDEVKRRFYKNWYRSKKKAFTRYAKK-AAENGGKSTQRELERI 145

Query: 154 KKYCTVIR--------------KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQK 199
           KKYCTV+R              KKAHLMEIQVNGGS+A KV FA+G FEK + +  VF++
Sbjct: 146 KKYCTVVRVLAHTQIRKTGLKQKKAHLMEIQVNGGSIADKVAFAHGLFEKPVEVSTVFEQ 205

Query: 200 DEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNG 259
           DE++D+I VTKG G+EGV  RWG  +LPRKTH+GLRKVACIGAWHP++V F+VARAGQ+G
Sbjct: 206 DEVVDVIAVTKGHGFEGVTARWGTKKLPRKTHKGLRKVACIGAWHPSKVMFSVARAGQDG 265

Query: 260 YHHRTEMNKKIYKLGKASQESHSAMTEFDRSVYLLSSLMG 299
           YHHRTE+NKKIY++G  S ++ +A T+ D +   ++ L G
Sbjct: 266 YHHRTELNKKIYRIGLGS-DAANARTDSDATDKSITPLGG 304


>gi|410985373|ref|XP_003998997.1| PREDICTED: 60S ribosomal protein L3-like [Felis catus]
          Length = 407

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/319 (59%), Positives = 239/319 (74%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHG LGFLP KR+SRHRGKVK +P+DDPS+P  LTAFLGYKAGMTH +R+V
Sbjct: 1   MSHRKFSAPRHGHLGFLPHKRSSRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
            +PG K+ K+E  EAVTI+ETPPLVVVGVVGYV TPRGLRS  T++A+HL++E RRRFYK
Sbjct: 61  HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           +W +SKKKAFTK  K++   +GKK +Q     MKKYC VIR              KKAH+
Sbjct: 121 DWHRSKKKAFTKACKRWRDAEGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG+VA+KV +A    EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW   +L
Sbjct: 181 MEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------ 280
           PRKTH+GLRKVACIGAWHPARV  ++ARAGQ GYHHRTE+NKKIY++G+           
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHTEDGKVVR 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T +D +   ++ L G
Sbjct: 301 NNASTSYDVTDKSITPLGG 319


>gi|78369254|ref|NP_001030578.1| 60S ribosomal protein L3-like [Bos taurus]
 gi|88932612|sp|Q3SZ10.3|RL3L_BOVIN RecName: Full=60S ribosomal protein L3-like
 gi|74267896|gb|AAI03273.1| Ribosomal protein L3-like [Bos taurus]
 gi|296473512|tpg|DAA15627.1| TPA: 60S ribosomal protein L3-like [Bos taurus]
          Length = 407

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/319 (59%), Positives = 239/319 (74%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHG LGFLP KR+ RHRGKVK +P+DDPS+P  LTAFLGYKAGMTH +R+V
Sbjct: 1   MSHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
            +PG K+ K+E  EAVTI+ETPPLVVVGVVGYV TPRGLRS  T++A+HL++E RRRFYK
Sbjct: 61  HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           +W KSKKKAFTK  K++   DGKK +Q     MKKYC VIR              KKAH+
Sbjct: 121 DWHKSKKKAFTKACKRWRDADGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           ME+Q+NGG+VA+KV +A    EKQ+P+ +VF ++E+ID+I VTKG+G +GV +RW   +L
Sbjct: 181 MEVQLNGGTVAEKVAWAQARLEKQVPVHSVFSQNEIIDVIAVTKGRGIKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------ 280
           PRKTH+GLRKVACIGAWHPARV  ++ARAGQ GYHHRTE+NKKIY++G+           
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHMEDGKVVK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T +D +   ++ L G
Sbjct: 301 NNASTSYDVTDKSITPLGG 319


>gi|281341592|gb|EFB17176.1| hypothetical protein PANDA_008982 [Ailuropoda melanoleuca]
          Length = 407

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 191/318 (60%), Positives = 239/318 (75%), Gaps = 20/318 (6%)

Query: 2   SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
           SHRKF  PRHG LGFLP KR+ RHRGKVK +P+DDPS+P  LTAFLGYKAGMTH +R+V 
Sbjct: 2   SHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSRPVHLTAFLGYKAGMTHTLREVH 61

Query: 62  KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
           +PG K+ K+E  EAVTI+ETPPLVVVGVVGYV TPRGLRS  T++A+HL++E RRRFYK+
Sbjct: 62  RPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYKD 121

Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLM 167
           W KSKKKAFTK  K++   DGKK +Q  L  MKKYC VIR              KKAH+M
Sbjct: 122 WHKSKKKAFTKACKRWRDADGKKQLQRDLAAMKKYCKVIRVIVHTQMKLLPFRQKKAHIM 181

Query: 168 EIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 227
           EIQ+NGG+VA+KV +A    EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW   +LP
Sbjct: 182 EIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP 241

Query: 228 RKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------H 281
           RKTH+GLRKVACIGAWHPARV  ++ARAGQ GYHHRTE+NKKIY++G+   +       +
Sbjct: 242 RKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHKEDGKVVKN 301

Query: 282 SAMTEFDRSVYLLSSLMG 299
           +A T +D +   ++ L G
Sbjct: 302 NASTSYDVTDKSITPLGG 319


>gi|300797628|ref|NP_001178518.1| 60S ribosomal protein L3-like [Rattus norvegicus]
          Length = 407

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 188/305 (61%), Positives = 231/305 (75%), Gaps = 14/305 (4%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHG LGFLP KR+ RHRGKVK++P+DDPS+P  LTAFLGYKAGMTH +R+V
Sbjct: 1   MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKSWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
            +PG K+ K+E  EAVTI+ETPPLVVVGVVGYV TPRGLRS  T++A+HL++E RRRFYK
Sbjct: 61  HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           +W KSKKKAFTK  K++   DGKK +Q     MKKYC VIR              KKAH+
Sbjct: 121 DWHKSKKKAFTKACKRWRDADGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG+VA+KV +A    EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW   +L
Sbjct: 181 MEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHPARV  ++ARAGQ GYHHRTE+NKKIY++G+        M  
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHMEDGKMVR 300

Query: 287 FDRSV 291
            + S 
Sbjct: 301 NNAST 305


>gi|355756447|gb|EHH60055.1| 60S ribosomal protein L3-like protein [Macaca fascicularis]
          Length = 425

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/319 (59%), Positives = 238/319 (74%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           +SHRKF  PRHG LGFLP KR+ RHRGKVK +P+DDPS+P  LTAFLGYKAGMTH +R+V
Sbjct: 11  LSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 70

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
            +PG K+ K+E  EAVTI+ETPPLVVVGVVGYV TPRGLRS  T++A+HL++E RRRFYK
Sbjct: 71  HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 130

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           +W KSKKKAFTK  K++   DGKK +Q     MKKYC VIR              KKAH+
Sbjct: 131 DWHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHI 190

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG+VA+KV +A    EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW   +L
Sbjct: 191 MEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKL 250

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------ 280
           PRKTH+GLRKVACIGAWHPARV  ++ARAGQ GYHHRTE+NKKIY++G+           
Sbjct: 251 PRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHMEDGKLVK 310

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T +D +   ++ L G
Sbjct: 311 NNASTSYDVTAKSITPLGG 329


>gi|351711301|gb|EHB14220.1| 60S ribosomal protein L3-like protein [Heterocephalus glaber]
          Length = 407

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/319 (59%), Positives = 238/319 (74%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHG LGFLP KR+ RHRGKVK +P+DDPS+P  LTAFLGYKAGMTH +R+V
Sbjct: 1   MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSRPVHLTAFLGYKAGMTHTLREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
            +PG K+ K+E  EAVTI+ETPPLVVVGVVGYV TPRGLRS  T++++HL++E RRRFYK
Sbjct: 61  HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFSEHLSDECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           +W KSKKKAFTK  K++   DGKK +Q     MKKYC VIR              KKAH+
Sbjct: 121 DWYKSKKKAFTKACKRWRDADGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG+VA+KV +A    EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW   +L
Sbjct: 181 MEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------ 280
           PRKTH+GLRKVACIGAWHPARV  ++ARAGQ GYHHRTE+NKKIY++G+           
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHMEDGKLVK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T +D +   ++ L G
Sbjct: 301 NNAATSYDVTDKSITPLGG 319


>gi|332240032|ref|XP_003269194.1| PREDICTED: 60S ribosomal protein L3-like [Nomascus leucogenys]
          Length = 407

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/319 (59%), Positives = 238/319 (74%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHG LGFLP KR+ RHRGKVK +P+DDPS+P  LTAFLGYKAGMTH +R+V
Sbjct: 1   MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
            +PG K+ K+E  EAVTI+ETPP+VVVGVVGYV TPRGLRS  T++A+HL++E RRRFYK
Sbjct: 61  HRPGLKISKREEVEAVTIVETPPVVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           +W KSKKKAFTK  K++   DGKK +Q     MKKYC VIR              KKAH+
Sbjct: 121 DWHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG+VA+KV +A    EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW   +L
Sbjct: 181 MEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------ 280
           PRKTH+GLRKVACIGAWHPARV  ++ARAGQ GYHHRTE+NKKIY++G+           
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGPHMEDGKLVK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T +D +   ++ L G
Sbjct: 301 NNASTSYDVTAKSITPLGG 319


>gi|403220923|dbj|BAM39056.1| ribosomal protein L3 [Theileria orientalis strain Shintoku]
          Length = 419

 Score =  370 bits (951), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 183/326 (56%), Positives = 227/326 (69%), Gaps = 53/326 (16%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PR GSLGFLP+KR+  HR K+++FPKDD S P  LTAF GYKAGMTH+V +V
Sbjct: 1   MSHRKFERPRSGSLGFLPKKRSRTHRAKIRSFPKDDVSAPPHLTAFAGYKAGMTHVVTEV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           +KPGSKLHKKE  EAVTI+ETPP+VVVG+VGYV+TP+GL+ L TVWA HL++EVRRRFYK
Sbjct: 61  DKPGSKLHKKEVVEAVTIVETPPMVVVGLVGYVETPKGLKVLGTVWAGHLSDEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW K+K+KAFTKY K++     +  ++ +L +++ Y TV+R              +KAHL
Sbjct: 121 NWYKAKRKAFTKYAKRF----AETKMENELSRLRNYATVVRALMHTQPSKTSLSLRKAHL 176

Query: 167 MEIQVNGGS-----------------------------------VAQKVDFAYGFFEKQI 191
           +E+QVNGG+                                   V  KV+F    FEK +
Sbjct: 177 LEVQVNGGTTEDKVRMRIQWATMSIDDSYFPVSGLMLIKHNSCIVDDKVNFVVNLFEKTV 236

Query: 192 PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFT 251
           P+ AVF ++EM+D++GVTKG G +GVV R+GVTRLPRKTHRGLRKVACIG+WHPARV F 
Sbjct: 237 PVSAVFSENEMLDVVGVTKGHGVKGVVARFGVTRLPRKTHRGLRKVACIGSWHPARVQFQ 296

Query: 252 VARAGQNGYHHRTEMNKKIYKLGKAS 277
           V R GQ GYH RTE NKKIY+LG  S
Sbjct: 297 VPRHGQMGYHKRTERNKKIYRLGSGS 322


>gi|291415728|ref|XP_002724100.1| PREDICTED: ribosomal protein L3-like [Oryctolagus cuniculus]
          Length = 407

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/319 (59%), Positives = 241/319 (75%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHG LGFLP KR+ RHRGKVK +P+DDPS+P  LTAFLGYKAGMTH +R+V
Sbjct: 1   MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSRPVHLTAFLGYKAGMTHTLREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
            +PG K+ K+E  EAVTI+ETPPLVVVGVVGYV TPRGLRS  TV+A+HL++E RRRFY+
Sbjct: 61  HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTVFAEHLSDECRRRFYR 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           +W +SKKKAFTK  +++   DGK+ +Q     MKKYC VIR              KKAH+
Sbjct: 121 DWHRSKKKAFTKACRRWRDADGKRQLQRDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG+VA+KV +A    EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW   +L
Sbjct: 181 MEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA--SQES---- 280
           PRKTH+GLRKVACIGAWHPARV  ++ARAGQ GYHHRTE+NKKIY++G+   SQ+     
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHSQDGKMVK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T +D +   ++ L G
Sbjct: 301 NNASTSYDVTDKSITPLGG 319


>gi|255653009|ref|NP_001157417.1| ribosomal protein L3-like isoform 1 [Mus musculus]
          Length = 407

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 187/305 (61%), Positives = 230/305 (75%), Gaps = 14/305 (4%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHG LGFLP KR+ RHRGKVK++P+DDPS+P  LTAFLGYKAGMTH +R+V
Sbjct: 1   MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKSWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
            +PG K+ K+E  EAVTI+ETPPLVVVGVVGYV TPRGLRS  T++A+HL++E RRRFYK
Sbjct: 61  HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           +W KSKKKAFTK  K++   DGKK +Q     MKKYC VIR              KKAH+
Sbjct: 121 DWHKSKKKAFTKACKRWRDADGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG+VA+KV +     EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW   +L
Sbjct: 181 MEIQLNGGTVAEKVAWVQARMEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHPARV  ++ARAGQ GYHHRTE+NKKIY++G+        M  
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHMEDGKMVR 300

Query: 287 FDRSV 291
            + S 
Sbjct: 301 NNAST 305


>gi|71032875|ref|XP_766079.1| 60S ribosomal protein L3 [Theileria parva strain Muguga]
 gi|68353036|gb|EAN33796.1| 60S ribosomal protein L3, putative [Theileria parva]
          Length = 384

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 186/315 (59%), Positives = 240/315 (76%), Gaps = 20/315 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PR GSLGFLP+KR+  HR K+++FP DDP+KP  LTAF+GYKAGMTH+V +V
Sbjct: 1   MSHRKFERPRSGSLGFLPKKRSRTHRAKIRSFPSDDPAKPPHLTAFVGYKAGMTHVVTEV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSKLHKKE  EAVT++ETPP+V VG+VGYV+TPRGL+ L TVWA HL++E+RRRFYK
Sbjct: 61  DRPGSKLHKKEVVEAVTVVETPPMVCVGLVGYVETPRGLKVLGTVWAGHLSDELRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK+     +  ++ +L++++ Y TV+R              +KAHL
Sbjct: 121 NWYKSKKKAFTKYAKKF----AETGMEQELKRIRNYATVVRALMHTQPSKTSLSLRKAHL 176

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           +E+QVNGG+  +KV +  G FEK +P+  VF ++EM+D++GVTKG G +GVV+R+GVTRL
Sbjct: 177 LEVQVNGGTTDEKVSYVVGLFEKSVPVSTVFGENEMLDVLGVTKGHGVKGVVSRYGVTRL 236

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIG+WHPARV F V R GQ GYH RTE NKKIY+LG  S  + +  T+
Sbjct: 237 PRKTHRGLRKVACIGSWHPARVQFQVPRHGQKGYHKRTERNKKIYRLGLGSS-ARNGSTD 295

Query: 287 FDRSVYLLSSLMGSF 301
            D +   ++  MG F
Sbjct: 296 SDLTEKTITP-MGGF 309


>gi|14336774|gb|AAK61301.1|AE006640_5 60S ribosomal protein L3 like [Homo sapiens]
          Length = 406

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 189/318 (59%), Positives = 237/318 (74%), Gaps = 20/318 (6%)

Query: 2   SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
           SHRKF  PRHG LGFLP KR+ RHRGKVK +P+DDPS+P  LTAFLGYKAGMTH +R+V 
Sbjct: 1   SHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREVH 60

Query: 62  KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
           +PG K+ K+E  EAVTI+ETPPLVVVGVVGYV TPRGLRS  T++A+HL++E RRRFYK+
Sbjct: 61  RPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYKD 120

Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLM 167
           W KSKKKAFTK  K++   DGKK +Q     MKKYC VIR              KKAH+M
Sbjct: 121 WHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHIM 180

Query: 168 EIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 227
           EIQ+NGG+VA+KV +A    EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW   +LP
Sbjct: 181 EIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP 240

Query: 228 RKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------H 281
           RKTH+GLRKVACIGAWHPARV  ++ARAGQ GYHHRTE+NKKI+++G+           +
Sbjct: 241 RKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIFRIGRGPHMEDGKLVKN 300

Query: 282 SAMTEFDRSVYLLSSLMG 299
           +A T +D +   ++ L G
Sbjct: 301 NASTSYDVTAKSITPLGG 318


>gi|440913411|gb|ELR62861.1| 60S ribosomal protein L3-like protein, partial [Bos grunniens
           mutus]
          Length = 407

 Score =  370 bits (949), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 189/318 (59%), Positives = 238/318 (74%), Gaps = 20/318 (6%)

Query: 2   SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
           SHRKF  PRHG LGFLP KR+ RHRGKVK +P+DDPS+P  LTAFLGYKAGMTH +R+V 
Sbjct: 2   SHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREVH 61

Query: 62  KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
           +PG K+ K+E  EAVTI+ETPPLVVVGVVGYV TPRGLRS  T++A+HL++E RRRFYK+
Sbjct: 62  RPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYKD 121

Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLM 167
           W KSKKKAFTK  K++   DGKK +Q     MKKYC VIR              KKAH+M
Sbjct: 122 WHKSKKKAFTKACKRWRDADGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHIM 181

Query: 168 EIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 227
           E+Q+NGG+VA+KV +A    EKQ+P+ +VF ++E+ID+I VTKG+G +GV +RW   +LP
Sbjct: 182 EVQLNGGTVAEKVAWAQARLEKQVPVHSVFSQNEIIDVIAVTKGRGIKGVTSRWHTKKLP 241

Query: 228 RKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------H 281
           RKTH+GLRKVACIGAWHPARV  ++ARAGQ GYHHRTE+NKKIY++G+           +
Sbjct: 242 RKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHMEDGKVVKN 301

Query: 282 SAMTEFDRSVYLLSSLMG 299
           +A T +D +   ++ L G
Sbjct: 302 NASTSYDVTDKSITPLGG 319


>gi|348584788|ref|XP_003478154.1| PREDICTED: 60S ribosomal protein L3-like [Cavia porcellus]
          Length = 417

 Score =  369 bits (948), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/318 (59%), Positives = 237/318 (74%), Gaps = 20/318 (6%)

Query: 2   SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
           SHRKF  PRHG LGFLP KR+ RHRGKVK +P+DDPS+P  LTAFLGYKAGMTH +R+V 
Sbjct: 12  SHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREVH 71

Query: 62  KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
           +PG K+ K+E  EAVTI+ETPPLVVVGVVGYV TPRGLRS  T++A+HL++E RRRFYK+
Sbjct: 72  RPGLKISKREEVEAVTIVETPPLVVVGVVGYVTTPRGLRSFKTIFAEHLSDECRRRFYKD 131

Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLM 167
           W KSKKKAFTK  K++   DGKK +Q     MKKYC VIR              KKAH+M
Sbjct: 132 WHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHIM 191

Query: 168 EIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 227
           EIQ+NGG+VA+KV +A    EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW   +LP
Sbjct: 192 EIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP 251

Query: 228 RKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------H 281
           RKTH+GLRKVACIGAWHPARV  ++ARAGQ GYHHRTE+NKKIY++G+           +
Sbjct: 252 RKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHMEDGKLVKN 311

Query: 282 SAMTEFDRSVYLLSSLMG 299
           +A T +D +   ++ L G
Sbjct: 312 NASTSYDVTDKSITPLGG 329


>gi|109127211|ref|XP_001082003.1| PREDICTED: 60S ribosomal protein L3-like [Macaca mulatta]
          Length = 407

 Score =  369 bits (947), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/319 (59%), Positives = 236/319 (73%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHG LGFLP KR+ RHRGKVK +P+DDPS+P  LTAFLGYKAGMTH +R+V
Sbjct: 1   MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
            +PG K+ K+E  EAVTI+ETPPLVVVGVVGYV TPRGLRS  T++A+HL++E RRRFYK
Sbjct: 61  HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           +W KSKKKAFTK  K++   DGKK +Q     MKKYC VIR              KKAH+
Sbjct: 121 DWHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+N G+VA KV +A    EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW   +L
Sbjct: 181 MEIQLNVGTVADKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------ 280
           PRKTH+GLRKVACIGAWHPARV  ++ARAGQ GYHHRTE+NKKIY++G+           
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHMEDGKLVK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T +D +   ++ L G
Sbjct: 301 NNASTSYDVTAKSITPLGG 319


>gi|156849033|ref|XP_001647397.1| hypothetical protein Kpol_1018p71 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156118083|gb|EDO19539.1| hypothetical protein Kpol_1018p71 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 387

 Score =  369 bits (946), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 196/315 (62%), Positives = 247/315 (78%), Gaps = 18/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHG LGFLPRKRA+  RG+VK+FPKDD SK   LT+FLGYKAGMT IVRD+
Sbjct: 1   MSHRKYEAPRHGHLGFLPRKRAASVRGRVKSFPKDDKSKAVALTSFLGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK HK+E  EAVT+++TPP+VVVGVVGYV+TPRGLRSL TVWA+HL++EVRRRFYK
Sbjct: 61  DRPGSKFHKREIVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAF+KY+ KY  D     I+ +L ++KKY +V+R              KKAHL
Sbjct: 121 NWYKSKKKAFSKYSTKYAQDGAA--IERELARIKKYASVVRVLVHTQVRKTPLSQKKAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQ+NGGS+++KVD+A   FEK + +D+VF+++EMID++ VTKG G+EGV  RWG  RL
Sbjct: 179 AEIQLNGGSISEKVDWAREHFEKTVAVDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKRL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIG WHPA V ++VARAGQ GYHHRT +N K+Y++GK   E+++A T 
Sbjct: 239 PRKTHRGLRKVACIGPWHPAHVMWSVARAGQRGYHHRTSINHKVYRVGKGEDEANAA-TS 297

Query: 287 FDRSVYLLSSLMGSF 301
           FDR+   ++  MG F
Sbjct: 298 FDRTKKTINP-MGGF 311


>gi|389582750|dbj|GAB65487.1| ribosomal protein L3 [Plasmodium cynomolgi strain B]
          Length = 386

 Score =  368 bits (945), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 186/315 (59%), Positives = 229/315 (72%), Gaps = 21/315 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSLGFLPRKR  R RGK+++FPKDD  KP   TAF+GYKAGMTHIVR+V
Sbjct: 1   MSHRKFERPRHGSLGFLPRKRCKRLRGKIRSFPKDDKEKPPHFTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           +KPGSKLHKKE  EA TIIE  P+VVVG+VGY +TP+GLR L TVWA H+++E RRR+YK
Sbjct: 61  DKPGSKLHKKEIVEACTIIECAPMVVVGMVGYRETPKGLRVLTTVWANHVSDEFRRRYYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KS KKAFTK          K   ++  ++++KYCTV+R              KKAH+
Sbjct: 121 NWYKSDKKAFTK-----ALMVPKLTKESLYKRIEKYCTVLRAVCHTQPSKTPLTMKKAHI 175

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG + +K+DF     EK +P+  VF  +EMID+I VTKG G +GVV+R+GV RL
Sbjct: 176 MEIQINGGGMKEKIDFLKELLEKNLPVSNVFNTNEMIDVISVTKGHGTKGVVSRYGVKRL 235

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPARV F V R GQ GY HRTE NKKIY++G   ++ ++A T+
Sbjct: 236 PRKTHRGLRKVACIGAWHPARVQFQVPRHGQKGYFHRTERNKKIYRIG-LKKDKNNASTD 294

Query: 287 FDRSVYLLSSLMGSF 301
            D +   ++  MG F
Sbjct: 295 ADITEKKITP-MGGF 308


>gi|149751051|ref|XP_001497954.1| PREDICTED: 60S ribosomal protein L3-like [Equus caballus]
          Length = 407

 Score =  368 bits (945), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 189/319 (59%), Positives = 237/319 (74%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHG LGFLP KR+ RHRGKVK +P+DDPS+P  LTAFLGYKAGMTH +R+V
Sbjct: 1   MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
            +PG K+ K+E  EAVTI+ETPPLVVVGVVGYV TPRGLRS  T++A+HL++E RRRFYK
Sbjct: 61  HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           +W KSKKKAFTK  +++    GKK +Q     MKKYC VIR              KKAH+
Sbjct: 121 DWHKSKKKAFTKACRRWRDASGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG+VA+KV +A    EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW   +L
Sbjct: 181 MEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------ 280
           PRKTH+GLRKVACIGAWHPARV  ++ARAGQ GYHHRTE+NKKIY++G+           
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHMEDGKVVK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T +D +   ++ L G
Sbjct: 301 NNASTSYDVTDKSITPLGG 319


>gi|431906679|gb|ELK10800.1| 60S ribosomal protein L3-like protein, partial [Pteropus alecto]
          Length = 406

 Score =  368 bits (945), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 189/318 (59%), Positives = 237/318 (74%), Gaps = 20/318 (6%)

Query: 2   SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
           SHRKF  PRHG LGFLP KR+ RHRGKVK +P+DDPS+P  LTAFLGYKAGMTH +R+V 
Sbjct: 1   SHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREVH 60

Query: 62  KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
           +PG K+ K+E  EAVTI+ETPPLVVVGVVGYV TPRGLRS  T++A+HL++E RRRFYK+
Sbjct: 61  RPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYKD 120

Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLM 167
           W KSKKKAFTK  K++   +GKK +Q     MKKYC VIR              KKAH+M
Sbjct: 121 WHKSKKKAFTKACKRWRDANGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHIM 180

Query: 168 EIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 227
           EIQ+NGG+VA+KV +A    EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW   +LP
Sbjct: 181 EIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP 240

Query: 228 RKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------H 281
           RKTH+GLRKVACIGAWHPARV  ++ARAGQ GYHHRTE+NKKIY++G+           +
Sbjct: 241 RKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGQGPHMEDGKVVKN 300

Query: 282 SAMTEFDRSVYLLSSLMG 299
           +A T +D +   ++ L G
Sbjct: 301 NASTSYDMTDKSITPLGG 318


>gi|326437430|gb|EGD83000.1| 60S ribosomal protein L3 [Salpingoeca sp. ATCC 50818]
          Length = 398

 Score =  368 bits (944), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 181/290 (62%), Positives = 226/290 (77%), Gaps = 14/290 (4%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLP+KR   HRG+V++FP+D+      LTAF+GYKAGMTHIVR++
Sbjct: 1   MSHRKFRAPRHGSLGFLPKKRTKHHRGRVRSFPRDNKEDKPHLTAFIGYKAGMTHIVREM 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++ GSK HKKE  EAVT++ETPP+V VG+VGYV+TPRGLR L TV+A +++E   RRFYK
Sbjct: 61  DRTGSKAHKKEVVEAVTVVETPPMVGVGIVGYVETPRGLRQLTTVFAGNMSETCMRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           N+ KSKKK F+KY  + +T++GKK+ + QL ++ KYCTVIR              KKAH+
Sbjct: 121 NYVKSKKKQFSKYFARLKTEEGKKNFEDQLRRLAKYCTVIRVIAHTKIDVLNLRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+ A+KV FA G  E+ IP+  VF +DE ID++G +KG+G+EGV  RWG  RL
Sbjct: 181 MEIQVNGGTPAEKVAFAKGLLEQDIPVGTVFVQDENIDVLGASKGRGFEGVTHRWGTKRL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA 276
           PRKTH+GLRKVACIGAWHPA V ++VARAGQNGYHHRTEMNKKIY +GK 
Sbjct: 241 PRKTHKGLRKVACIGAWHPANVQYSVARAGQNGYHHRTEMNKKIYMVGKG 290


>gi|354478689|ref|XP_003501547.1| PREDICTED: 60S ribosomal protein L3-like [Cricetulus griseus]
          Length = 407

 Score =  368 bits (944), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 188/319 (58%), Positives = 237/319 (74%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHG LGFLP KR+ RHRGKVK++P+DDP +P  LTAFLGYKAGMTH +R+V
Sbjct: 1   MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKSWPRDDPKQPVHLTAFLGYKAGMTHTLREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
            +PG K+ K+E  EAVTI+ETPPLVVVGVVGYV TPRGLRS  T++A+HL++E RRRFY+
Sbjct: 61  HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYR 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           +W KSKKKAFTK  K++    GKK +Q     MKKYC VIR              KKAH+
Sbjct: 121 DWHKSKKKAFTKACKRWRDPSGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG+VA+KV +A    EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW   +L
Sbjct: 181 MEIQLNGGTVAEKVAWAQAQLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------ 280
           PRKTH+GLRKVACIGAWHPARV  ++ARAGQ GYHHRTE+NKKIY++G+           
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHMEDGKMVK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T +D +   ++ L G
Sbjct: 301 NNASTSYDMTDKSITPLGG 319


>gi|109100342|ref|XP_001106678.1| PREDICTED: 60S ribosomal protein L3-like isoform 1 [Macaca mulatta]
          Length = 354

 Score =  367 bits (943), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 183/305 (60%), Positives = 223/305 (73%), Gaps = 41/305 (13%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR SRH GKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRRSRHHGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+E PP+VVVG+ GYV+TPRGLR+  TV+A+H+ +E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVEMPPMVVVGIAGYVETPRGLRTFKTVFAEHMGDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKV 180
           NW KSK                                   KKAHL EIQVNGG+VA+K+
Sbjct: 121 NWHKSK-----------------------------------KKAHLTEIQVNGGTVAEKL 145

Query: 181 DFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACI 240
           D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV + W   +LPRKTHRGLRKVACI
Sbjct: 146 DWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSHWHTKKLPRKTHRGLRKVACI 205

Query: 241 GAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQESHSAMTEFDRSVYLL 294
           GA HPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           ++A T++D S   +
Sbjct: 206 GARHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSI 265

Query: 295 SSLMG 299
           + L G
Sbjct: 266 NPLGG 270


>gi|156081997|ref|XP_001608491.1| ribosomal protein L3 [Plasmodium vivax Sal-1]
 gi|148801062|gb|EDL42467.1| ribosomal protein L3, putative [Plasmodium vivax]
          Length = 386

 Score =  367 bits (942), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 186/315 (59%), Positives = 228/315 (72%), Gaps = 21/315 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSLGFLPRKR  R RGK+++FPKDD  KP   TAF+GYKAGMTHIVR+V
Sbjct: 1   MSHRKFERPRHGSLGFLPRKRCKRLRGKIRSFPKDDKEKPPHFTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           +KPGSKLHKKE  EA TIIE  P+VVVG+VGY +TP+GLR L TVWA H+++E RRR+YK
Sbjct: 61  DKPGSKLHKKEIVEACTIIECAPMVVVGMVGYRETPKGLRILTTVWANHVSDEFRRRYYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KS KKAFTK          K   ++  ++++KYCTV+R              KKAH+
Sbjct: 121 NWYKSDKKAFTKALMV-----PKLTKESLYKRIEKYCTVLRAVCHTQPSKTPLSMKKAHI 175

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG +  K+DF     EK +P+  VF  +EMID+I VTKG G +GVV+R+GV RL
Sbjct: 176 MEIQINGGGMKDKIDFLKELLEKNLPVSNVFNTNEMIDVISVTKGHGTKGVVSRYGVKRL 235

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPARV F V R GQ GY HRTE NKKIY++G   ++ ++A T+
Sbjct: 236 PRKTHRGLRKVACIGAWHPARVQFQVPRHGQKGYFHRTERNKKIYRIG-LKKDKNNASTD 294

Query: 287 FDRSVYLLSSLMGSF 301
            D +   ++  MG F
Sbjct: 295 ADITEKKITP-MGGF 308


>gi|6324637|ref|NP_014706.1| ribosomal 60S subunit protein L3 [Saccharomyces cerevisiae S288c]
 gi|2507307|sp|P14126.4|RL3_YEAST RecName: Full=60S ribosomal protein L3; AltName: Full=Maintenance
           of killer protein 8; AltName: Full=RP1; AltName:
           Full=Trichodermin resistance protein; AltName: Full=YL1
 gi|315113528|pdb|3O58|C Chain C, Yeast 80s Ribosome. This Entry Consists Of The 60s Subunit
           Of The First 80s In The Asymmetric Unit.
 gi|315113573|pdb|3O5H|C Chain C, Yeast 80s Ribosome. This Entry Consists Of The 60s Subunit
           Of The Second 80s In The Asymmetric Unit.
 gi|365767253|pdb|3U5E|B Chain B, The Structure Of The Eukaryotic Ribosome At 3.0 A
           Resolution. This Entry Contains Proteins Of The 60s
           Subunit, Ribosome A
 gi|365767294|pdb|3U5I|B Chain B, The Structure Of The Eukaryotic Ribosome At 3.0 A
           Resolution. This Entry Contains Proteins Of The 60s
           Subunit, Ribosome B
 gi|410562480|pdb|4B6A|B Chain B, Cryo-Em Structure Of The 60s Ribosomal Subunit In Complex
           With Arx1 And Rei1
 gi|1420207|emb|CAA99256.1| TCM1 [Saccharomyces cerevisiae]
 gi|2104875|emb|CAA94548.1| YOR29-14 [Saccharomyces cerevisiae]
 gi|151945689|gb|EDN63930.1| ribosomal protein L3 [Saccharomyces cerevisiae YJM789]
 gi|190407398|gb|EDV10665.1| ribosomal protein L3 [Saccharomyces cerevisiae RM11-1a]
 gi|256269309|gb|EEU04617.1| Rpl3p [Saccharomyces cerevisiae JAY291]
 gi|259149545|emb|CAY86349.1| Rpl3p [Saccharomyces cerevisiae EC1118]
 gi|285814949|tpg|DAA10842.1| TPA: ribosomal 60S subunit protein L3 [Saccharomyces cerevisiae
           S288c]
 gi|323302848|gb|EGA56652.1| Rpl3p [Saccharomyces cerevisiae FostersB]
 gi|323307150|gb|EGA60433.1| Rpl3p [Saccharomyces cerevisiae FostersO]
 gi|323331453|gb|EGA72868.1| Rpl3p [Saccharomyces cerevisiae AWRI796]
 gi|323335592|gb|EGA76876.1| Rpl3p [Saccharomyces cerevisiae Vin13]
 gi|323346509|gb|EGA80796.1| Rpl3p [Saccharomyces cerevisiae Lalvin QA23]
 gi|323352260|gb|EGA84796.1| Rpl3p [Saccharomyces cerevisiae VL3]
 gi|349581226|dbj|GAA26384.1| K7_Rpl3p [Saccharomyces cerevisiae Kyokai no. 7]
 gi|365763295|gb|EHN04825.1| Rpl3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
 gi|392296394|gb|EIW07496.1| Rpl3p [Saccharomyces cerevisiae CEN.PK113-7D]
          Length = 387

 Score =  367 bits (942), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 198/315 (62%), Positives = 245/315 (77%), Gaps = 18/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHG LGFLPRKRA+  R +VKAFPKDD SKP  LT+FLGYKAGMT IVRD+
Sbjct: 1   MSHRKYEAPRHGHLGFLPRKRAASIRARVKAFPKDDRSKPVALTSFLGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK HK+E  EAVT+++TPP+VVVGVVGYV+TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGSKFHKREVVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY+ KY  D     I+ +L ++KKY +V+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDGA--GIERELARIKKYASVVRVLVHTQIRKTPLAQKKAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQ+NGGS+++KVD+A   FEK + +D+VF+++EMID I VTKG G+EGV  RWG  +L
Sbjct: 179 AEIQLNGGSISEKVDWAREHFEKTVAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPA V ++VARAGQ GYH RT +N KIY++GK   E++ A T 
Sbjct: 239 PRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHSRTSINHKIYRVGKGDDEANGA-TS 297

Query: 287 FDRSVYLLSSLMGSF 301
           FDR+   ++  MG F
Sbjct: 298 FDRTKKTITP-MGGF 311


>gi|344292026|ref|XP_003417729.1| PREDICTED: 60S ribosomal protein L3-like [Loxodonta africana]
          Length = 579

 Score =  367 bits (942), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 190/318 (59%), Positives = 237/318 (74%), Gaps = 20/318 (6%)

Query: 2   SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
           SHRKF  PRHG LGFLP KR+SRHRGKVK +P+DDPS+P  LTAFLGYKAGMTH +R+V 
Sbjct: 174 SHRKFSAPRHGHLGFLPHKRSSRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREVH 233

Query: 62  KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
           +PG K+ K+E  EAVTI+ETPPLVVVGVVGYV T RGLRS  T++A+HL++E RRRFYK+
Sbjct: 234 RPGLKISKREEVEAVTIVETPPLVVVGVVGYVATTRGLRSFKTIFAEHLSDECRRRFYKD 293

Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLM 167
           W KSKKKAFTK  K++   DGKK +Q     MKKYC VIR              KKAH+M
Sbjct: 294 WHKSKKKAFTKACKRWRDPDGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHIM 353

Query: 168 EIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 227
           EIQ+NGG+VA+KV +A  + EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW   +LP
Sbjct: 354 EIQLNGGTVAEKVAWAQAWLEKQVPVHSVFSQSEIIDVIAVTKGRGIKGVTSRWHTKKLP 413

Query: 228 RKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------H 281
           RKTH+GLRKVACIGAWHPARV  ++ARAGQ GYHHRTE+NKKIY +G+           +
Sbjct: 414 RKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYCIGRGPHMEEGKLVRN 473

Query: 282 SAMTEFDRSVYLLSSLMG 299
           +A T +D +   ++ L G
Sbjct: 474 NASTSYDVTDKSITPLGG 491


>gi|315113303|pdb|3IZS|C Chain C, Localization Of The Large Subunit Ribosomal Proteins Into
           A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae
           Translating 80s Ribosome
          Length = 388

 Score =  367 bits (942), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 198/315 (62%), Positives = 245/315 (77%), Gaps = 18/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHG LGFLPRKRA+  R +VKAFPKDD SKP  LT+FLGYKAGMT IVRD+
Sbjct: 1   MSHRKYEAPRHGHLGFLPRKRAASIRARVKAFPKDDRSKPVALTSFLGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK HK+E  EAVT+++TPP+VVVGVVGYV+TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGSKFHKREVVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY+ KY  D     I+ +L ++KKY +V+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDGA--GIERELARIKKYASVVRVLVHTQIRKTPLAQKKAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQ+NGGS+++KVD+A   FEK + +D+VF+++EMID I VTKG G+EGV  RWG  +L
Sbjct: 179 AEIQLNGGSISEKVDWAREHFEKTVAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPA V ++VARAGQ GYH RT +N KIY++GK   E++ A T 
Sbjct: 239 PRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHSRTSINHKIYRVGKGDDEANGA-TS 297

Query: 287 FDRSVYLLSSLMGSF 301
           FDR+   ++  MG F
Sbjct: 298 FDRTKKTITP-MGGF 311


>gi|284073158|gb|ADB77818.1| 60S ribosomal protein L3 [Entransia fimbriata]
          Length = 236

 Score =  367 bits (942), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 178/236 (75%), Positives = 199/236 (84%), Gaps = 15/236 (6%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           KFEH RHGSLGFLPRKR+ R RGKVK+FP+DDP+KP  LTAF+GYKAGMTHI+RDV+KPG
Sbjct: 1   KFEHARHGSLGFLPRKRSKRIRGKVKSFPRDDPTKPPGLTAFMGYKAGMTHIMRDVDKPG 60

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
           SKLHKKE CEAVTIIE PP+VVVG+VGYVKTPRGLRSL TVWAQHL+EEV RRFYKN+ K
Sbjct: 61  SKLHKKEACEAVTIIEAPPIVVVGLVGYVKTPRGLRSLVTVWAQHLSEEVIRRFYKNYAK 120

Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAHLMEI 169
           SKKKAFTKY K+Y+  +GKKD+  QLE+MKKYC VIR               KKAH+MEI
Sbjct: 121 SKKKAFTKYRKQYDNPEGKKDVDKQLERMKKYCQVIRVLAHTQVKKVKGIRQKKAHIMEI 180

Query: 170 QVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           QVNGGSVA+KVDF   +FEK IPIDAVF KDEM+DIIGVT+G GYEGVVTRWGVTR
Sbjct: 181 QVNGGSVAEKVDFGVKYFEKAIPIDAVFNKDEMVDIIGVTRGHGYEGVVTRWGVTR 236


>gi|221054097|ref|XP_002261796.1| ribosomal protein L3 [Plasmodium knowlesi strain H]
 gi|193808256|emb|CAQ38959.1| ribosomal protein L3, putative [Plasmodium knowlesi strain H]
          Length = 386

 Score =  366 bits (940), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 185/315 (58%), Positives = 228/315 (72%), Gaps = 21/315 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSLGFLPRKR  R RGK+++FPKDD  KP   TAF+GYKAGMTHIVR+V
Sbjct: 1   MSHRKFERPRHGSLGFLPRKRCKRLRGKIRSFPKDDKEKPPHFTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           +KPGSKLHKKE  EA TI+E  P+VVVG+VGY +TP+GLR L TVWA H+++E RRR+YK
Sbjct: 61  DKPGSKLHKKEIVEACTIVECAPMVVVGMVGYRETPKGLRILTTVWANHVSDEFRRRYYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KS KKAFTK          K   ++  ++++KYCTV+R              KKAH+
Sbjct: 121 NWYKSDKKAFTKALMV-----PKLTKESLYKRIEKYCTVLRAVCHTQPSKTPLSMKKAHI 175

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG +  K+DF     EK +P+  VF  +EMID+I VTKG G +GVV+R+GV RL
Sbjct: 176 MEIQINGGGMKDKIDFLKELMEKNLPVSNVFNTNEMIDVISVTKGHGTKGVVSRYGVKRL 235

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPARV F V R GQ GY HRTE NKKIY++G   ++ ++A T+
Sbjct: 236 PRKTHRGLRKVACIGAWHPARVQFQVPRHGQKGYFHRTERNKKIYRIG-LKKDKNNASTD 294

Query: 287 FDRSVYLLSSLMGSF 301
            D +   ++  MG F
Sbjct: 295 ADITEKKITP-MGGF 308


>gi|444320033|ref|XP_004180673.1| hypothetical protein TBLA_0E00930 [Tetrapisispora blattae CBS 6284]
 gi|387513716|emb|CCH61154.1| hypothetical protein TBLA_0E00930 [Tetrapisispora blattae CBS 6284]
          Length = 387

 Score =  366 bits (940), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 195/315 (61%), Positives = 244/315 (77%), Gaps = 18/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHG LGFLPRKRA+  RG+VK+FPKDD SK   LT+FLGYKAGMT IVRD+
Sbjct: 1   MSHRKYEAPRHGHLGFLPRKRAASIRGRVKSFPKDDKSKAVALTSFLGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK HK+E  EAVT+++TPP+VVVGVVGYV+TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGSKFHKREVVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY+ KY  D     I+ +L ++ KY +V+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDPA--SIERELARITKYASVVRVLVHTQIRKTPLSQKKAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            E+Q+NGGS+A KV +A   FEK + +D+VF+++E+ID++ VTKG G+EGV  RWG  RL
Sbjct: 179 AEVQLNGGSIADKVQWAKEHFEKTVSVDSVFEQNELIDVVAVTKGHGFEGVTHRWGTKRL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIG WHPA V ++VARAGQNGYHHRT +N K+Y++GKA  E+ S  T 
Sbjct: 239 PRKTHRGLRKVACIGPWHPAHVMWSVARAGQNGYHHRTSINHKVYRVGKAGDEA-SGATN 297

Query: 287 FDRSVYLLSSLMGSF 301
           FDR+   ++  MG F
Sbjct: 298 FDRTKKTVTP-MGGF 311


>gi|365758431|gb|EHN00274.1| Rpl3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
          Length = 387

 Score =  366 bits (940), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 196/315 (62%), Positives = 245/315 (77%), Gaps = 18/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHG LGFLPRKRA+  R +VKAFPKDD SKP  LT+FLGYKAGMT IVRD+
Sbjct: 1   MSHRKYEAPRHGHLGFLPRKRAASIRARVKAFPKDDRSKPVALTSFLGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK HK+E  EAVT+++TPP+VVVG+VGYV+TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGSKFHKREVVEAVTVVDTPPVVVVGIVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY+ KY  D     ++ +L ++KKY +V+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDGA--GVERELARVKKYASVVRVLVHTQIRKTPLSQKKAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQ+NGGS+++KVD+A   FEK I +D+VF+++EMID I VTKG G+EGV  RWG  +L
Sbjct: 179 AEIQLNGGSISEKVDWAREHFEKTIAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPA V ++VARAGQ GYH RT +N K+Y++GK   E++ A T 
Sbjct: 239 PRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHSRTSINHKVYRVGKGDDEANGA-TS 297

Query: 287 FDRSVYLLSSLMGSF 301
           FDR+   ++  MG F
Sbjct: 298 FDRTKKTINP-MGGF 311


>gi|145527660|ref|XP_001449630.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124417218|emb|CAK82233.1| unnamed protein product [Paramecium tetraurelia]
          Length = 393

 Score =  365 bits (938), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 174/313 (55%), Positives = 226/313 (72%), Gaps = 18/313 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHG+LGF PRKR   HRG+++AFPKD+      LTAF G+KAGMTHI+R V
Sbjct: 1   MSHRKFEAPRHGNLGFTPRKRTKHHRGRIRAFPKDNTKAQPHLTAFAGFKAGMTHILRTV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           E+PGSKL+     EAVTI+ETPPLVVVG+VGY++TPRGLR+L TVW+  + ++  RRFYK
Sbjct: 61  ERPGSKLNGNVVVEAVTIVETPPLVVVGIVGYIETPRGLRALTTVWSTKIAKDTLRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW  SKKKAFT Y K    +   K+++ QL+++ KYC V+R              KK H+
Sbjct: 121 NWINSKKKAFTNYNK---ANAEPKNLETQLKRIVKYCQVVRVIVHTQMSKLNLRQKKNHV 177

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            E+QVNGG+  QKV+FA G  EK++ +D VF ++E ID++GVTKGKG  GV+ R+GV  L
Sbjct: 178 FEVQVNGGNTEQKVNFAKGLLEKEVKVDQVFNQNEQIDVLGVTKGKGVAGVIKRFGVKHL 237

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
            +KTHRG R+V CIG WHPA V ++VAR GQ GYHHRTEMNKKIY++G A+ + ++A TE
Sbjct: 238 QKKTHRGWRRVGCIGGWHPANVRYSVARTGQLGYHHRTEMNKKIYRIG-AAGDKNTASTE 296

Query: 287 FDRSVYLLSSLMG 299
            D +   ++ L G
Sbjct: 297 ADLTSKAITPLGG 309


>gi|395835745|ref|XP_003790833.1| PREDICTED: 60S ribosomal protein L3-like [Otolemur garnettii]
          Length = 407

 Score =  365 bits (937), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 185/305 (60%), Positives = 229/305 (75%), Gaps = 14/305 (4%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHG LGFLP KR+ RHRGKVK +P+D+PS+P  LTAFLGYKAGMTH +R+V
Sbjct: 1   MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDNPSQPVHLTAFLGYKAGMTHTLREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
            +PG K+ K+E  EAVTI+ETPPLVVVGVVGYV TPRGLRS  T++A+HL++E RRRFYK
Sbjct: 61  HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           +W KSKKKAFTK  K++    GKK +Q     MKKYC VIR              KKAH+
Sbjct: 121 DWHKSKKKAFTKSCKRWRDTSGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG+VA+KV +A    EKQ+ + +VF + E+ID+I VTKG+G +GV +RW   +L
Sbjct: 181 MEIQLNGGTVAEKVAWAQARLEKQVSVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTH+GLRKVACIGAWHPARV  ++ARAGQ GYHHRTE+NKKIY++G+        M +
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYQIGRGIHMEDGKMVK 300

Query: 287 FDRSV 291
            + S 
Sbjct: 301 NNAST 305


>gi|49258841|pdb|1S1I|C Chain C, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From
           Yeast Obtained By Docking Atomic Models For Rna And
           Protein Components Into A 11.7 A Cryo-Em Map. This File,
           1s1i, Contains 60s Subunit. The 40s Ribosomal Subunit Is
           In File 1s1h
          Length = 386

 Score =  365 bits (936), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 197/314 (62%), Positives = 244/314 (77%), Gaps = 18/314 (5%)

Query: 2   SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
           SHRK+E PRHG LGFLPRKRA+  R +VKAFPKDD SKP  LT+FLGYKAGMT IVRD++
Sbjct: 1   SHRKYEAPRHGHLGFLPRKRAASIRARVKAFPKDDRSKPVALTSFLGYKAGMTTIVRDLD 60

Query: 62  KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
           +PGSK HK+E  EAVT+++TPP+VVVGVVGYV+TPRGLRSL TVWA+HL++EV+RRFYKN
Sbjct: 61  RPGSKFHKREVVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKN 120

Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLM 167
           W KSKKKAFTKY+ KY  D     I+ +L ++KKY +V+R              KKAHL 
Sbjct: 121 WYKSKKKAFTKYSAKYAQDGA--GIERELARIKKYASVVRVLVHTQIRKTPLAQKKAHLA 178

Query: 168 EIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 227
           EIQ+NGGS+++KVD+A   FEK + +D+VF+++EMID I VTKG G+EGV  RWG  +LP
Sbjct: 179 EIQLNGGSISEKVDWAREHFEKTVAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLP 238

Query: 228 RKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEF 287
           RKTHRGLRKVACIGAWHPA V ++VARAGQ GYH RT +N KIY++GK   E++ A T F
Sbjct: 239 RKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHSRTSINHKIYRVGKGDDEANGA-TSF 297

Query: 288 DRSVYLLSSLMGSF 301
           DR+   ++  MG F
Sbjct: 298 DRTKKTITP-MGGF 310


>gi|441617792|ref|XP_004092915.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L3 [Nomascus
           leucogenys]
          Length = 375

 Score =  364 bits (934), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 177/291 (60%), Positives = 224/291 (76%), Gaps = 20/291 (6%)

Query: 29  VKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVG 88
           +K+FPKDDPSKP  LTAFLGYKAGMTHIVR+V++PGSK++KKE  EAVTI+E PP+VVVG
Sbjct: 1   MKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVEAPPMVVVG 60

Query: 89  VVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQA 148
           +VGYV+TPRGLR+  TV+A+H+++E +RRFYKNW KSKKKAFTKY KK++ +DGKK ++ 
Sbjct: 61  IVGYVETPRGLRTFKTVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEK 120

Query: 149 QLEKMKKYCTVIR--------------KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPID 194
               MKKYC VIR              + AHLMEIQVNGG+VA+K+D+A    E+Q   +
Sbjct: 121 DFSSMKKYCQVIRVIAHTQMRLLPLRQRXAHLMEIQVNGGTVAEKLDWARERLEQQYLXE 180

Query: 195 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVAR 254
            VF +DEMID+IG  +GKGY+GV +RW   +LPRKTHRGLRKVACIGAWHPARV+F+VAR
Sbjct: 181 PVFGQDEMIDVIGXDQGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVAR 240

Query: 255 AGQNGYHHRTEMNKKIYKLGK------ASQESHSAMTEFDRSVYLLSSLMG 299
           AGQ GYHHRTE+NKKIYK+G+           ++A T++D S   ++ L G
Sbjct: 241 AGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGG 291


>gi|401623590|gb|EJS41683.1| rpl3p [Saccharomyces arboricola H-6]
          Length = 387

 Score =  363 bits (932), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 197/315 (62%), Positives = 244/315 (77%), Gaps = 18/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHG LGFLPRKRA+  R +VKAFPKDD SK   LT+FLGYKAGMT IVRD+
Sbjct: 1   MSHRKYEAPRHGHLGFLPRKRAASIRARVKAFPKDDKSKAVALTSFLGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK HK+E  EAVT+++TPP+VVVGVVGYV+TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGSKFHKREVVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY+ KY  +     I+ +L ++KKY +V+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYSAKYAQEGA--GIERELARIKKYASVVRVLVHTQVRKTPLVQKKAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQ+NGGSV++KVD+A   FEK + +D+VF+++EMID I VTKG G+EGV  RWG  +L
Sbjct: 179 AEIQLNGGSVSEKVDWAREHFEKTVAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPA V ++VARAGQ GYH RT +N KIY++GK   E++ A T 
Sbjct: 239 PRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHSRTSINHKIYRVGKGDDEANGA-TN 297

Query: 287 FDRSVYLLSSLMGSF 301
           FDR+   ++  MG F
Sbjct: 298 FDRTKKTINP-MGGF 311


>gi|72387810|ref|XP_844329.1| ribosomal protein L3 [Trypanosoma brucei brucei strain 927/4
           GUTat10.1]
 gi|62359480|gb|AAX79917.1| ribosomal protein L3, putative [Trypanosoma brucei]
 gi|70800862|gb|AAZ10770.1| ribosomal protein L3, putative [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 480

 Score =  362 bits (929), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 178/319 (55%), Positives = 229/319 (71%), Gaps = 19/319 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSH KFEHPRHG LGFLPRKR+ + RG+ ++FPKDDPS+   LT+F+ YKAGMTHIVRDV
Sbjct: 52  MSHCKFEHPRHGHLGFLPRKRSRQIRGRARSFPKDDPSQKPHLTSFMVYKAGMTHIVRDV 111

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  E VTI+E PP+VVVG+VGY +TP G +++ TVWA H + E RRRFYK
Sbjct: 112 DRPGSKVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKTIGTVWAHHTSVEFRRRFYK 171

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR-----------------KK 163
           NW +S + AFTK  +   T +G+      L+  +K   +IR                 KK
Sbjct: 172 NWKQSAQLAFTKRKQFARTTEGRLAEARTLKAFEKKADIIRVVAHTQLRKLRNNRVGVKK 231

Query: 164 AHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 223
           AH+ EIQ+NGG++AQK++ A    EK++ ID+VFQ+ E  D+  VTKG G+ GVV RWGV
Sbjct: 232 AHVSEIQINGGTIAQKIELAKSLLEKEVRIDSVFQQSEACDVCAVTKGHGFTGVVKRWGV 291

Query: 224 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA-SQESHS 282
             LPRKTHRGLRKVACIGAWHP+RV +TVARAGQ+GYHHRT +NKKIY+LG+A S E + 
Sbjct: 292 ACLPRKTHRGLRKVACIGAWHPSRVMYTVARAGQHGYHHRTHLNKKIYQLGRAVSMEPNQ 351

Query: 283 AMTEFDRSVYLLSSLMGSF 301
           A T +D +   ++  MG F
Sbjct: 352 ATTAYDLTAKTITP-MGGF 369


>gi|261327490|emb|CBH10465.1| ribosomal protein L3, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 480

 Score =  361 bits (927), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 178/319 (55%), Positives = 229/319 (71%), Gaps = 19/319 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSH KFEHPRHG LGFLPRKR+ + RG+ ++FPKDDPS+   LT+F+ YKAGMTHIVRDV
Sbjct: 52  MSHCKFEHPRHGHLGFLPRKRSRQIRGRARSFPKDDPSQKPHLTSFMVYKAGMTHIVRDV 111

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  E VTI+E PP+VVVG+VGY +TP G +++ TVWA H + E RRRFYK
Sbjct: 112 DRPGSKVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKTIGTVWAHHTSVEFRRRFYK 171

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR-----------------KK 163
           NW +S + AFTK  +   T +G+      L+  +K   +IR                 KK
Sbjct: 172 NWKQSAQLAFTKRKQFARTTEGRLAEARTLKAFEKKADIIRVVAHTQLRKLRNNRVGVKK 231

Query: 164 AHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 223
           AH+ EIQ+NGG++AQK++ A    EK++ ID+VFQ+ E  D+  VTKG G+ GVV RWGV
Sbjct: 232 AHVSEIQINGGTIAQKIELAKSLLEKEVRIDSVFQQSEACDVCAVTKGHGFTGVVKRWGV 291

Query: 224 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA-SQESHS 282
             LPRKTHRGLRKVACIGAWHP+RV +TVARAGQ+GYHHRT +NKKIY+LG+A S E + 
Sbjct: 292 ACLPRKTHRGLRKVACIGAWHPSRVMYTVARAGQHGYHHRTHLNKKIYQLGRAVSMEPNQ 351

Query: 283 AMTEFDRSVYLLSSLMGSF 301
           A T +D +   ++  MG F
Sbjct: 352 ATTAYDLTAKTITP-MGGF 369


>gi|1197059|gb|AAA88732.1| ribosomal protein L3 [Saccharomyces cerevisiae]
          Length = 387

 Score =  361 bits (927), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 197/315 (62%), Positives = 244/315 (77%), Gaps = 18/315 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHG LGFLPRKRA+  R +VKAFPKDD SKP  LT+FLGYKAGMT IVRD+
Sbjct: 1   MSHRKYEAPRHGHLGFLPRKRAASIRARVKAFPKDDRSKPVALTSFLGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK HK+E  EAVT+++TPP+VVVGVVGYV+TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGSKFHKREVVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY+ KY  D     I+ +L ++KKY +V+R              KKAHL
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDGA--GIERELARIKKYASVVRVLVHTQIRKTPLAQKKAHL 178

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQ+NGGS+++KVD+A   FEK + +D+VF+++EMID I VTKG G+EGV  RWG  +L
Sbjct: 179 AEIQLNGGSISEKVDWAREHFEKTVAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKL 238

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGA HPA V ++VARAGQ GYH RT +N KIY++GK   E++ A T 
Sbjct: 239 PRKTHRGLRKVACIGACHPAHVMWSVARAGQRGYHSRTSINHKIYRVGKGDDEANGA-TS 297

Query: 287 FDRSVYLLSSLMGSF 301
           FDR+   ++  MG F
Sbjct: 298 FDRTKKTITP-MGGF 311


>gi|72387812|ref|XP_844330.1| ribosomal protein L3, mitochondrial [Trypanosoma brucei TREU927]
 gi|449802250|pdb|3ZF7|FF Chain f, High-resolution Cryo-electron Microscopy Structure Of The
           Trypanosoma Brucei Ribosome
 gi|62359481|gb|AAX79918.1| ribosomal protein L3, mitochondrial, putative [Trypanosoma brucei]
 gi|70800863|gb|AAZ10771.1| ribosomal protein L3, mitochondrial, putative [Trypanosoma brucei
           brucei strain 927/4 GUTat10.1]
 gi|261327491|emb|CBH10466.1| ribosomal protein L3, mitochondrial, putative [Trypanosoma brucei
           gambiense DAL972]
          Length = 429

 Score =  360 bits (925), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 178/319 (55%), Positives = 229/319 (71%), Gaps = 19/319 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSH KFEHPRHG LGFLPRKR+ + RG+ ++FPKDDPS+   LT+F+ YKAGMTHIVRDV
Sbjct: 1   MSHCKFEHPRHGHLGFLPRKRSRQIRGRARSFPKDDPSQKPHLTSFMVYKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  E VTI+E PP+VVVG+VGY +TP G +++ TVWA H + E RRRFYK
Sbjct: 61  DRPGSKVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKTIGTVWAHHTSVEFRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR-----------------KK 163
           NW +S + AFTK  +   T +G+      L+  +K   +IR                 KK
Sbjct: 121 NWKQSAQLAFTKRKQFARTTEGRLAEARTLKAFEKKADIIRVVAHTQLRKLRNNRVGVKK 180

Query: 164 AHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 223
           AH+ EIQ+NGG++AQK++ A    EK++ ID+VFQ+ E  D+  VTKG G+ GVV RWGV
Sbjct: 181 AHVSEIQINGGTIAQKIELAKSLLEKEVRIDSVFQQSEACDVCAVTKGHGFTGVVKRWGV 240

Query: 224 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA-SQESHS 282
             LPRKTHRGLRKVACIGAWHP+RV +TVARAGQ+GYHHRT +NKKIY+LG+A S E + 
Sbjct: 241 ACLPRKTHRGLRKVACIGAWHPSRVMYTVARAGQHGYHHRTHLNKKIYQLGRAVSMEPNQ 300

Query: 283 AMTEFDRSVYLLSSLMGSF 301
           A T +D +   ++  MG F
Sbjct: 301 ATTAYDLTAKTITP-MGGF 318


>gi|407850972|gb|EKG05117.1| ribosomal protein L13, putative [Trypanosoma cruzi]
          Length = 462

 Score =  359 bits (921), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 177/319 (55%), Positives = 229/319 (71%), Gaps = 19/319 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSH KFEHPRHG LGFLPRKR+ + RG+V++FPKDDPS+   LT+F+ +KAGMTHIVRDV
Sbjct: 35  MSHCKFEHPRHGHLGFLPRKRSRQIRGRVRSFPKDDPSQKPHLTSFMVFKAGMTHIVRDV 94

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  E VTI+E PP+VVVG+VGY +TP G +++ TVWA H + E RRRFYK
Sbjct: 95  DRPGSKVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKTIGTVWAHHTSVEFRRRFYK 154

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR-----------------KK 163
           NW +S + AFTK  +   T +G+      L+   K   +IR                 KK
Sbjct: 155 NWKQSAQLAFTKRKQFARTTEGRLAEARTLKAFAKKADIIRVVAHTQLRKLRNNRVGVKK 214

Query: 164 AHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 223
           AH+ EIQ+NGG++A+K++ A    EK++ ID++FQ+ E  D+  VTKG G+ GVV RWGV
Sbjct: 215 AHVSEIQINGGTIAEKIELAKSLLEKEVRIDSIFQQSETCDVCAVTKGHGFTGVVKRWGV 274

Query: 224 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA-SQESHS 282
             LPRKTHRGLRKVACIGAWHPARV +TVARAGQ+GYHHRT +NKKIY+LG+A S E + 
Sbjct: 275 ACLPRKTHRGLRKVACIGAWHPARVMYTVARAGQHGYHHRTHLNKKIYQLGRAVSMEPNQ 334

Query: 283 AMTEFDRSVYLLSSLMGSF 301
           A T +D +   ++  MG F
Sbjct: 335 ATTTYDLTAKSITP-MGGF 352


>gi|332825391|ref|XP_001143080.2| PREDICTED: 60S ribosomal protein L3-like [Pan troglodytes]
          Length = 718

 Score =  359 bits (921), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 178/293 (60%), Positives = 223/293 (76%), Gaps = 20/293 (6%)

Query: 27  GKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVV 86
           GK  A      SKP  LTAFLGYKAGMTHIVR+V++PGSK++KKE  EAVTI+ETPP+VV
Sbjct: 342 GKCLALRDGVSSKPVHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVV 401

Query: 87  VGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDI 146
           VG+VGYV+TPRGLR+  TV+A+H+++E +RRFYKNW KSKKKAFTKY KK++ +D KK +
Sbjct: 402 VGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDEDDKKQL 461

Query: 147 QAQLEKMKKYCTVIR--------------KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIP 192
           +     MKKYC VIR              KKAHLMEIQVNGG+VA+K+D+A    E+Q+P
Sbjct: 462 EKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVP 521

Query: 193 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTV 252
           ++ VF +DEMID+IGVTKGKGY+GV +RW    LPRKTH+GLRKVACIGAWHPARV+F+V
Sbjct: 522 VNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKNLPRKTHQGLRKVACIGAWHPARVAFSV 581

Query: 253 ARAGQNGYHHRTEMNKKIYKLGK------ASQESHSAMTEFDRSVYLLSSLMG 299
           ARAGQ GYHHRTE+NKKIYK+G+           ++A T++D S   ++ L G
Sbjct: 582 ARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGG 634


>gi|71652016|ref|XP_814673.1| ribosomal protein L3 [Trypanosoma cruzi strain CL Brener]
 gi|71652018|ref|XP_814674.1| ribosomal protein L3 [Trypanosoma cruzi strain CL Brener]
 gi|70879667|gb|EAN92822.1| ribosomal protein L3, putative [Trypanosoma cruzi]
 gi|70879668|gb|EAN92823.1| ribosomal protein L3, putative [Trypanosoma cruzi]
          Length = 428

 Score =  359 bits (921), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 177/319 (55%), Positives = 229/319 (71%), Gaps = 19/319 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSH KFEHPRHG LGFLPRKR+ + RG+V++FPKDDPS+   LT+F+ +KAGMTHIVRDV
Sbjct: 1   MSHCKFEHPRHGHLGFLPRKRSRQIRGRVRSFPKDDPSQKPHLTSFMVFKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  E VTI+E PP+VVVG+VGY +TP G +++ TVWA H + E RRRFYK
Sbjct: 61  DRPGSKVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKTIGTVWAHHTSVEFRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR-----------------KK 163
           NW +S + AFTK  +   T +G+      L+   K   +IR                 KK
Sbjct: 121 NWKQSAQLAFTKRKQFARTTEGRLAEARTLKAFAKKADIIRVVAHTQLRKLRNNRVGVKK 180

Query: 164 AHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 223
           AH+ EIQ+NGG++A+K++ A    EK++ ID++FQ+ E  D+  VTKG G+ GVV RWGV
Sbjct: 181 AHVSEIQINGGTIAEKIELAKSLLEKEVRIDSIFQQSETCDVCAVTKGHGFTGVVKRWGV 240

Query: 224 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA-SQESHS 282
             LPRKTHRGLRKVACIGAWHPARV +TVARAGQ+GYHHRT +NKKIY+LG+A S E + 
Sbjct: 241 ACLPRKTHRGLRKVACIGAWHPARVMYTVARAGQHGYHHRTHLNKKIYQLGRAVSMEPNQ 300

Query: 283 AMTEFDRSVYLLSSLMGSF 301
           A T +D +   ++  MG F
Sbjct: 301 ATTTYDLTAKSITP-MGGF 318


>gi|342180584|emb|CCC90060.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 429

 Score =  359 bits (921), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 178/319 (55%), Positives = 227/319 (71%), Gaps = 19/319 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSH KFEHPRHG LGFLPRKR+ + RG+ ++FPKDDPS+   LT+F+ YKAGMTHIVRDV
Sbjct: 1   MSHCKFEHPRHGHLGFLPRKRSRQIRGRARSFPKDDPSQKPHLTSFMVYKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  E VTI+E PP+VVVG VGY +TP G +++ TVWA H + E RRRFYK
Sbjct: 61  DRPGSKVNKKEVVEPVTILEAPPMVVVGFVGYRQTPVGHKTIGTVWAHHTSVEFRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR-----------------KK 163
           NW +S + AFTK  +   T +G+      L+   K   +IR                 KK
Sbjct: 121 NWKQSAQLAFTKRKQFARTTEGRLAEARTLKAFAKKADIIRVVAHTQLRKLRNNRVGVKK 180

Query: 164 AHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 223
           AH+ EIQ+NGG++AQK++ A    EK++ ID+VFQ+ E  D+  VTKG G+ GVV RWGV
Sbjct: 181 AHVSEIQINGGTIAQKIELAKSLLEKEVRIDSVFQQSEACDVCAVTKGHGFTGVVKRWGV 240

Query: 224 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA-SQESHS 282
             LPRKTHRGLRKVACIGAWHP+RV +TVARAGQ+GYHHRT +NKKIY+LG+A S E + 
Sbjct: 241 ACLPRKTHRGLRKVACIGAWHPSRVMYTVARAGQHGYHHRTHLNKKIYQLGRAVSMEPNQ 300

Query: 283 AMTEFDRSVYLLSSLMGSF 301
           A T +D +   ++  MG F
Sbjct: 301 ATTSYDLTAKTITP-MGGF 318


>gi|348537834|ref|XP_003456398.1| PREDICTED: 60S ribosomal protein L3-like [Oreochromis niloticus]
          Length = 422

 Score =  358 bits (920), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 187/320 (58%), Positives = 240/320 (75%), Gaps = 21/320 (6%)

Query: 2   SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
           SHRKF  PRHG +GFLP KR+ +HRG+V+++PKD+PS P  LTAFLGYKAGMTH +R+V 
Sbjct: 16  SHRKFHAPRHGHMGFLPCKRSKKHRGRVRSWPKDNPSHPVHLTAFLGYKAGMTHTLREVH 75

Query: 62  KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
           + G K  K+E  EAVTIIETPP++VVGVVGY+KT RGLR+L T++A+HL++E +RRFYKN
Sbjct: 76  RTGLKQSKREEVEAVTIIETPPVIVVGVVGYIKTIRGLRALKTIFAEHLSDECKRRFYKN 135

Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLM 167
           W KSKKKAFTKY KK++ + GKK +      MKKYC+VIR              KKAH+M
Sbjct: 136 WYKSKKKAFTKYAKKWQDETGKKQLDKDFNAMKKYCSVIRVIVHSQMRLLPLRQKKAHVM 195

Query: 168 EIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 227
           E+Q+NGG+++ KVD+A    E+ +P+ AVF +DEMID+IGVTKG G++GV +RW   +LP
Sbjct: 196 EVQLNGGTISDKVDWAKEHLEQAVPVSAVFYQDEMIDVIGVTKGHGFKGVTSRWHTKKLP 255

Query: 228 RKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------H 281
           RKTH+GLRKVACIGAWHPARV FT ARAGQ GYHHRTE+NKKIY++G+           +
Sbjct: 256 RKTHKGLRKVACIGAWHPARVGFTEARAGQKGYHHRTEINKKIYRIGRGLHIQDGKVIRN 315

Query: 282 SAMTEFDRSVYLLSSLMGSF 301
           +A T +D S   ++  MG F
Sbjct: 316 NASTNYDISQKTITP-MGGF 334


>gi|281500833|pdb|3JYW|C Chain C, Structure Of The 60s Proteins For Eukaryotic Ribosome
           Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome
           At 8.9a Resolution
          Length = 362

 Score =  358 bits (920), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 194/311 (62%), Positives = 241/311 (77%), Gaps = 18/311 (5%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K+E PRHG LGFLPRKRA+  R +VKAFPKDD SKP  LT+FLGYKAGMT IVRD+++PG
Sbjct: 1   KYEAPRHGHLGFLPRKRAASIRARVKAFPKDDRSKPVALTSFLGYKAGMTTIVRDLDRPG 60

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
           SK HK+E  EAVT+++TPP+VVVGVVGYV+TPRGLRSL TVWA+HL++EV+RRFYKNW K
Sbjct: 61  SKFHKREVVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKNWYK 120

Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLMEIQ 170
           SKKKAFTKY+ KY  D     I+ +L ++KKY +V+R              KKAHL EIQ
Sbjct: 121 SKKKAFTKYSAKYAQDGA--GIERELARIKKYASVVRVLVHTQIRKTPLAQKKAHLAEIQ 178

Query: 171 VNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 230
           +NGGS+++KVD+A   FEK + +D+VF+++EMID I VTKG G+EGV  RWG  +LPRKT
Sbjct: 179 LNGGSISEKVDWAREHFEKTVAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLPRKT 238

Query: 231 HRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRS 290
           HRGLRKVACIGAWHPA V ++VARAGQ GYH RT +N KIY++GK   E++ A T FDR+
Sbjct: 239 HRGLRKVACIGAWHPAHVMWSVARAGQRGYHSRTSINHKIYRVGKGDDEANGA-TSFDRT 297

Query: 291 VYLLSSLMGSF 301
              ++  MG F
Sbjct: 298 KKTITP-MGGF 307


>gi|71984544|ref|NP_001021255.1| Protein RPL-3, isoform c [Caenorhabditis elegans]
 gi|51011806|emb|CAH10799.1| Protein RPL-3, isoform c [Caenorhabditis elegans]
          Length = 353

 Score =  358 bits (918), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 174/304 (57%), Positives = 218/304 (71%), Gaps = 38/304 (12%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHG +GF P+KR+  +RG++KAFPKDD SKP  LTAFLGYKAGMTHIVRDV
Sbjct: 1   MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           +KPGSK++KKE  EAVTI+ETPP+V+ GV GYV TP+G R+L T+WA+HL+EE RRRFY 
Sbjct: 61  DKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYS 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKV 180
           NW KSKKKAFTKY KK++ +DGKK I+A   K+KKYC+ IR  AH               
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHT-------------- 166

Query: 181 DFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACI 240
                               +MID IGVT+G G++GV +RW   +LPRKTH+GLRKVACI
Sbjct: 167 --------------------QMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACI 206

Query: 241 GAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAS---QESHSAMTEFDRSVYLLSSL 297
           GAWHP+RV+FTVARAGQ G+HHRT +N KIY++GK++   +  ++  TEFD +   ++  
Sbjct: 207 GAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNNGSTEFDLTQKTITP- 265

Query: 298 MGSF 301
           MG F
Sbjct: 266 MGGF 269


>gi|407411575|gb|EKF33582.1| ribosomal protein L13, putative [Trypanosoma cruzi marinkellei]
          Length = 428

 Score =  358 bits (918), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 176/319 (55%), Positives = 229/319 (71%), Gaps = 19/319 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSH KFEHPRHG LGFLPRKR+ + RG+V++FPKDDPS+   LT+F+ +KAGMTHIVRDV
Sbjct: 1   MSHCKFEHPRHGHLGFLPRKRSRQIRGRVRSFPKDDPSQKPHLTSFMVFKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  E VTI+E PP+VVVG+VGY +TP G +++ TVWA H + E RRRFYK
Sbjct: 61  DRPGSKVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKTIGTVWAHHTSVEFRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR-----------------KK 163
           NW +S + AFTK  +   T +G+      L+   K   +IR                 KK
Sbjct: 121 NWKQSAQLAFTKRKQFARTAEGRLAEARTLKAFAKKADIIRVVAHTQLRKLRNNRVGVKK 180

Query: 164 AHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 223
           AH+ EIQ+NGG++A+K++ A    EK++ ID++FQ+ E  D+  VTKG G+ GVV RWGV
Sbjct: 181 AHVSEIQINGGTIAEKIELAKSLLEKEVRIDSIFQQSETCDVCAVTKGHGFTGVVKRWGV 240

Query: 224 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA-SQESHS 282
             LPRKTHRGLRKVACIGAWHP+RV +TVARAGQ+GYHHRT +NKKIY+LG+A S E + 
Sbjct: 241 ACLPRKTHRGLRKVACIGAWHPSRVMYTVARAGQHGYHHRTHLNKKIYQLGRAVSMEPNQ 300

Query: 283 AMTEFDRSVYLLSSLMGSF 301
           A T +D +   ++  MG F
Sbjct: 301 ATTTYDLTAKSITP-MGGF 318


>gi|82596814|ref|XP_726417.1| ribosomal protein L3 [Plasmodium yoelii yoelii 17XNL]
 gi|23481819|gb|EAA17982.1| ribosomal protein L3, putative [Plasmodium yoelii yoelii]
          Length = 386

 Score =  357 bits (917), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 179/315 (56%), Positives = 225/315 (71%), Gaps = 21/315 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSLGFLPRKR  R RGK+++FPKD+   P   TAF+GYK+GM+HIVR+V
Sbjct: 1   MSHRKFERPRHGSLGFLPRKRCKRLRGKIRSFPKDNKELPPHFTAFMGYKSGMSHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           +KPGSKLHKKE  EA TI+E  P+VVVG+VGY +TP+GL+ L  VWA H+++E RRR+YK
Sbjct: 61  DKPGSKLHKKEIVEACTIVECAPMVVVGMVGYRETPKGLKVLTAVWANHVSDEFRRRYYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KS KKAFTK     +T   K        +++KYCT++R              KKAH+
Sbjct: 121 NWYKSDKKAFTKCLNIPDTTKEK-----LYNRIEKYCTILRAVCHTQPSKTPLRLKKAHI 175

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG +  K++F     EK IP+  VF  +EMID+I VTKG G +GVV+R+GV RL
Sbjct: 176 MEIQINGGHMKDKINFVKELLEKNIPVTNVFNTNEMIDVISVTKGHGTKGVVSRYGVKRL 235

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVACIGAWHPARV F V R GQ GY HRTE NKKIY++G   ++ ++A T+
Sbjct: 236 PRKTHRGLRKVACIGAWHPARVQFQVPRHGQKGYFHRTERNKKIYRIG-LKKDKNNASTD 294

Query: 287 FDRSVYLLSSLMGSF 301
            D +   ++  MG F
Sbjct: 295 ADITEKKITP-MGGF 308


>gi|145324164|ref|NP_001077671.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
 gi|332193833|gb|AEE31954.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
          Length = 306

 Score =  357 bits (917), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 170/212 (80%), Positives = 187/212 (88%), Gaps = 15/212 (7%)

Query: 94  KTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKM 153
           KTPRGLRSL TVWAQHL+EEVRRRFYKNW KSKKKAFT Y K+Y+++DGKK IQAQLEKM
Sbjct: 11  KTPRGLRSLNTVWAQHLSEEVRRRFYKNWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKM 70

Query: 154 KKYCTVIR---------------KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQ 198
           KKY TVIR               KKAH+MEIQ+NGG++AQKVDFAY FFEKQIPI+AVFQ
Sbjct: 71  KKYATVIRVLAHTQIRKMKGLKQKKAHMMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQ 130

Query: 199 KDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQN 258
           KDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS+TVARAGQN
Sbjct: 131 KDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQN 190

Query: 259 GYHHRTEMNKKIYKLGKASQESHSAMTEFDRS 290
           GYHHRTE+NKKIY+LGK   E+H+AMTE+DR+
Sbjct: 191 GYHHRTELNKKIYRLGKVGTEAHTAMTEYDRT 222


>gi|261195566|ref|XP_002624187.1| 60S ribosomal protein L3 [Ajellomyces dermatitidis SLH14081]
 gi|239588059|gb|EEQ70702.1| 60S ribosomal protein L3 [Ajellomyces dermatitidis SLH14081]
 gi|239610450|gb|EEQ87437.1| 60S ribosomal protein L3 [Ajellomyces dermatitidis ER-3]
          Length = 346

 Score =  357 bits (916), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 173/269 (64%), Positives = 211/269 (78%), Gaps = 17/269 (6%)

Query: 47  LGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVW 106
           +GYKAGMT  VRD+++PG+K+HKKE  EAVTI+ETPP++ VGVVGY++TPRGLRSL TVW
Sbjct: 1   MGYKAGMTTTVRDLDRPGAKMHKKEIVEAVTIVETPPMIAVGVVGYIETPRGLRSLTTVW 60

Query: 107 AQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR----- 161
           A+HL++EV+RRFYKNW KSKKKAFTKY K +  + G   I  +LE++KKYCTV+R     
Sbjct: 61  AEHLSDEVKRRFYKNWYKSKKKAFTKYAKNHSENSGA-SISRELERIKKYCTVVRVLAHT 119

Query: 162 ---------KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGK 212
                    KKAHLME+QVNGGSVA KVDFA+G FEK I ID+VF+KDEMID+I VTKG 
Sbjct: 120 QIRKTPLKQKKAHLMEVQVNGGSVADKVDFAHGLFEKPIEIDSVFEKDEMIDVIAVTKGH 179

Query: 213 GYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYK 272
           G+ GV +RWG  +LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ+GYHHRT  N KIY+
Sbjct: 180 GFNGVTSRWGTKKLPRKTHKGLRKVACIGAWHPSHVQWTVARAGQDGYHHRTSCNHKIYR 239

Query: 273 LGKASQESHSAMTEFDRSVYLLSSLMGSF 301
           +GK S E  +A TEFD S   ++  MG F
Sbjct: 240 IGKGSDEG-NASTEFDVSKKQITP-MGGF 266


>gi|410902231|ref|XP_003964598.1| PREDICTED: 60S ribosomal protein L3-like [Takifugu rubripes]
          Length = 408

 Score =  356 bits (914), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 183/321 (57%), Positives = 245/321 (76%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHG  GFLP KR+ +HRG+V+++PKDD  +P  LTAFLGYKAGMTH +R+V
Sbjct: 1   MSHRKFHAPRHGHTGFLPHKRSKKHRGRVRSWPKDDARRPVHLTAFLGYKAGMTHTLREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++ G K  K+E  EAVTIIETPP++VVGVVGY++T  GLRS  +V+A+HL++E +RRFY+
Sbjct: 61  QRVGLKQAKREEVEAVTIIETPPVIVVGVVGYIQTVHGLRSFKSVFAEHLSDECKRRFYR 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY+KK++ + GKK ++ + E+MKKYC+VIR              KKAH+
Sbjct: 121 NWYKSKKKAFTKYSKKWQDEKGKKQLEKEFEQMKKYCSVIRVIIHTQMRLLPIGQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           ME+Q+NGGS++ KVD+A    E+ +P+ +VF +DE IDIIGVTKG+G++GV++RW   +L
Sbjct: 181 MEVQLNGGSISDKVDWAKEHLEQAVPVSSVFYQDETIDIIGVTKGRGFKGVMSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 280
           PRKTH+GLRKVACIGAWHPARV +T+ARAGQ GY+HRTE+NKKIY++G+           
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVGYTIARAGQKGYYHRTEINKKIYRIGRGVHVHDGKVIR 300

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           ++A T +D S   ++  MG F
Sbjct: 301 NNASTHYDTSQKTITP-MGGF 320


>gi|154282025|ref|XP_001541825.1| 60S ribosomal protein L3 [Ajellomyces capsulatus NAm1]
 gi|150412004|gb|EDN07392.1| 60S ribosomal protein L3 [Ajellomyces capsulatus NAm1]
          Length = 346

 Score =  356 bits (914), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 172/269 (63%), Positives = 210/269 (78%), Gaps = 17/269 (6%)

Query: 47  LGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVW 106
           +GYKAGMT  VRD+E+PG+K+HKKE  EAVTI+ETPP++ VGVVGY++TPRGLRSL TVW
Sbjct: 1   MGYKAGMTTTVRDLERPGAKMHKKEIVEAVTIVETPPMIAVGVVGYIETPRGLRSLTTVW 60

Query: 107 AQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR----- 161
           A+HL++EV+RRFYKNW KSKKKAFTKY K +  + G   +  +LE++KKYCTV+R     
Sbjct: 61  AEHLSDEVKRRFYKNWYKSKKKAFTKYAKNHSENKGA-SVARELERIKKYCTVVRLLAHT 119

Query: 162 ---------KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGK 212
                    KKAHLME+QVNGGSVA KVDFA+G FEK I ID +F+KDEMID+I VTKG 
Sbjct: 120 QIRKTPLKQKKAHLMEVQVNGGSVADKVDFAHGLFEKPIEIDTIFEKDEMIDVIAVTKGH 179

Query: 213 GYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYK 272
           G+ GV +RWG  +LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ+GYHHRT  N KIY+
Sbjct: 180 GFNGVTSRWGTKKLPRKTHKGLRKVACIGAWHPSHVQWTVARAGQDGYHHRTSCNHKIYR 239

Query: 273 LGKASQESHSAMTEFDRSVYLLSSLMGSF 301
           +GK S E  +A TEFD S   ++  MG F
Sbjct: 240 IGKGSDEG-NASTEFDVSKKQITP-MGGF 266


>gi|403335216|gb|EJY66782.1| 60S ribosomal protein L3 [Oxytricha trifallax]
          Length = 397

 Score =  356 bits (914), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 181/317 (57%), Positives = 236/317 (74%), Gaps = 18/317 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PR GSL +LPR+R   HRG++++FP+DD   P  LTAF+GYKAGMTH+ R  
Sbjct: 1   MSHRKYECPRSGSLAYLPRRRTRHHRGRIRSFPRDDVKAPIHLTAFVGYKAGMTHVARHH 60

Query: 61  EK-PGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFY 119
           EK  G K+ K++  E VT+IETPP+ +VG+VGY++TPRGLR+L TVWAQH+ ++V+RRFY
Sbjct: 61  EKREGKKVIKRDIVEPVTVIETPPMKIVGLVGYIETPRGLRALATVWAQHIPDQVKRRFY 120

Query: 120 KNWCKSKKKAFTKYTKKYETDD-GKKDIQAQLEKMKKYCTVIR--------------KKA 164
           KNWC+SKKKAFTKY ++++ DD  KK I+  LE++KKYC V+R              +KA
Sbjct: 121 KNWCQSKKKAFTKYAQRWQEDDKSKKSIKRDLERIKKYCQVVRVLTSTQLDKLNFRQRKA 180

Query: 165 HLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 224
           HL+EIQVNGG+VAQKVD+++  FE ++ +  +F  +EMID IGVTKG G EGV+ R+GVT
Sbjct: 181 HLIEIQVNGGTVAQKVDWSFAKFESEVSVAEIFNDNEMIDTIGVTKGYGTEGVIKRFGVT 240

Query: 225 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES--HS 282
           R+PRKTHRGLRKV CIGAWHPA V +TVAR GQ GYH RTE NKKIY++G  +     ++
Sbjct: 241 RMPRKTHRGLRKVGCIGAWHPAAVKWTVARRGQLGYHSRTEQNKKIYRVGAGAVRGVKNN 300

Query: 283 AMTEFDRSVYLLSSLMG 299
           A TE D     ++ L G
Sbjct: 301 ATTEADAIEKNITPLGG 317


>gi|395747312|ref|XP_003778589.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L3-like
           [Pongo abelii]
          Length = 402

 Score =  355 bits (911), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 190/319 (59%), Positives = 238/319 (74%), Gaps = 20/319 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHG LGFLP KR+ RHRGKVK +P+DDPS+P  LTAFLGYKAGMTH +R+V
Sbjct: 1   MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
            +PG K+ K+E  EAVTI+ETPPLVVVGVVGYV TPRGLRS  T++A+HL++E RRRFYK
Sbjct: 61  HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           +W KSKKKAF+K  K++   DGKK +Q     MKKYC VIR              KKAH+
Sbjct: 121 DWHKSKKKAFSKACKRWRDPDGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGG+VA+KV +A    EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW   +L
Sbjct: 181 MEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------ 280
           PRKTH+GLRKVACIGAWHPARV  ++ARAGQ GYHHRTE+NKKIY++G+           
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGPHMEDGKLVK 300

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T +D +   ++ L G
Sbjct: 301 NNASTSYDVTAKAITPLGG 319


>gi|157874311|ref|XP_001685639.1| putative ribosomal protein L3 [Leishmania major strain Friedlin]
 gi|157876054|ref|XP_001686391.1| putative ribosomal protein L3 [Leishmania major strain Friedlin]
 gi|157876056|ref|XP_001686392.1| putative ribosomal protein L3 [Leishmania major strain Friedlin]
 gi|157876058|ref|XP_001686393.1| putative ribosomal protein L3 [Leishmania major strain Friedlin]
 gi|157876060|ref|XP_001686394.1| putative ribosomal protein L3 [Leishmania major strain Friedlin]
 gi|66476128|gb|AAY51372.1| ribosomal protein L3 [Leishmania major]
 gi|68128711|emb|CAJ08844.1| putative ribosomal protein L3 [Leishmania major strain Friedlin]
 gi|68129465|emb|CAJ08008.1| putative ribosomal protein L3 [Leishmania major strain Friedlin]
 gi|68129466|emb|CAJ08009.1| putative ribosomal protein L3 [Leishmania major strain Friedlin]
 gi|68129467|emb|CAJ08010.1| putative ribosomal protein L3 [Leishmania major strain Friedlin]
 gi|68129468|emb|CAJ08011.1| putative ribosomal protein L3 [Leishmania major strain Friedlin]
          Length = 419

 Score =  355 bits (910), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 175/319 (54%), Positives = 227/319 (71%), Gaps = 19/319 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSH KFEHPRHG LGFLPRKR+ + RG+ +AFPKDD ++   LT+F+ +KAGMTHIVRDV
Sbjct: 1   MSHCKFEHPRHGHLGFLPRKRSRQIRGRARAFPKDDATQKPHLTSFMVFKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  E VTI+E PP+V+VG+VGY +TP GL+++ TVWA H + E RRR+YK
Sbjct: 61  DRPGSKVNKKEVVEPVTILEAPPMVIVGIVGYRQTPVGLKTIGTVWAHHTSVEFRRRYYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR-----------------KK 163
           NW +S + AF++  +   T +GK      L    K  +VIR                 KK
Sbjct: 121 NWKQSAQLAFSRQKQFANTKEGKVAEARTLNAFAKKASVIRVIAHTQLRKLRNHRVGVKK 180

Query: 164 AHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 223
           AH+ EIQVNGGSVA K+  A    EK++ +D+VFQ+ E  D+  VTKG G EGVV RWGV
Sbjct: 181 AHVQEIQVNGGSVAAKIALAKSLLEKEVRVDSVFQQSEACDVCSVTKGHGTEGVVKRWGV 240

Query: 224 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA-SQESHS 282
             LPRKTHRGLRKVACIGAWHPARV +TVARAGQ+GYHHRT++NKKIY++G++ + E + 
Sbjct: 241 ACLPRKTHRGLRKVACIGAWHPARVMYTVARAGQHGYHHRTQLNKKIYQIGRSVAVEPNQ 300

Query: 283 AMTEFDRSVYLLSSLMGSF 301
           A T +D +   ++  MG F
Sbjct: 301 ATTTYDLTAKTITP-MGGF 318


>gi|146097010|ref|XP_001468006.1| putative ribosomal protein L3 [Leishmania infantum JPCM5]
 gi|134072372|emb|CAM71080.1| putative ribosomal protein L3 [Leishmania infantum JPCM5]
          Length = 419

 Score =  354 bits (909), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 175/319 (54%), Positives = 227/319 (71%), Gaps = 19/319 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSH KFEHPRHG LGFLPRKR+ + RG+ +AFPKDD ++   LT+F+ +KAGMTHIVRDV
Sbjct: 1   MSHCKFEHPRHGHLGFLPRKRSRQIRGRARAFPKDDATQKPHLTSFMVFKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  E VTI+E PP+V+VG+VGY +TP GL+++ TVWA H + E RRR+YK
Sbjct: 61  DRPGSKVNKKEVVEPVTILEAPPMVIVGIVGYRQTPVGLKTIGTVWAHHTSVEFRRRYYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR-----------------KK 163
           NW +S + AF++  +   T +GK      L    K  +VIR                 KK
Sbjct: 121 NWKQSAQLAFSRQKQFANTKEGKVAEARTLNAFAKKASVIRVIAHTQLRKLRNHRVGVKK 180

Query: 164 AHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 223
           AH+ EIQVNGGSVA K+  A    EK++ +D+VFQ+ E  D+  VTKG G EGVV RWGV
Sbjct: 181 AHVQEIQVNGGSVAAKIALAKSLLEKEVRVDSVFQQSEACDVCSVTKGHGTEGVVKRWGV 240

Query: 224 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA-SQESHS 282
             LPRKTHRGLRKVACIGAWHPARV +TVARAGQ+GYHHRT++NKKIY++G++ + E + 
Sbjct: 241 ACLPRKTHRGLRKVACIGAWHPARVMYTVARAGQHGYHHRTQLNKKIYQIGRSVAVEPNQ 300

Query: 283 AMTEFDRSVYLLSSLMGSF 301
           A T +D +   ++  MG F
Sbjct: 301 ATTTYDLTAKTITP-MGGF 318


>gi|291402716|ref|XP_002717715.1| PREDICTED: ribosomal protein L3-like [Oryctolagus cuniculus]
          Length = 428

 Score =  353 bits (906), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 180/308 (58%), Positives = 224/308 (72%), Gaps = 26/308 (8%)

Query: 12  GSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKE 71
           G L F P +  S        F   DPSKP  LTAFLGYKAGMTHIVR+V+ PGSK++KKE
Sbjct: 44  GPLRFRPSRLLS------APFISLDPSKPVHLTAFLGYKAGMTHIVREVDWPGSKVNKKE 97

Query: 72  TCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFT 131
             EAVTI+ETPP+VVVG+VGYV+TPRGLR+  TV+A+H+++E +RRFYKNW KSKKKAFT
Sbjct: 98  VVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNWHKSKKKAFT 157

Query: 132 KYTKKYETDDGKKDIQAQLEKMKKYCTVI--------------RKKAHLMEIQVNGGSVA 177
           KY KK++ D GK+ +      MKKYC VI              +KKAHLMEIQVNGG+VA
Sbjct: 158 KYCKKWQDDAGKRQLDKDFSSMKKYCLVISVLAHTQMRLLPLQQKKAHLMEIQVNGGTVA 217

Query: 178 QKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKV 237
           +K+D+A    E+Q+P+  VF +D+MID+IGVTKGKGY+GV +RW   +L RKTHRGLRKV
Sbjct: 218 EKLDWAQERLEQQVPVSQVFGQDKMIDVIGVTKGKGYKGVTSRWHTKKLLRKTHRGLRKV 277

Query: 238 ACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQESHSAMTEFDRSV 291
           ACIGAWHPA V+F+VARAGQ GYHHRTE+NKKIYK+G+           ++A T +D S 
Sbjct: 278 ACIGAWHPAHVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTNYDLSD 337

Query: 292 YLLSSLMG 299
             ++ L G
Sbjct: 338 KSINPLGG 345


>gi|353227573|emb|CCA78076.1| probable RPL3-60s ribosomal protein l3 [Piriformospora indica DSM
           11827]
          Length = 360

 Score =  352 bits (904), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 175/280 (62%), Positives = 219/280 (78%), Gaps = 15/280 (5%)

Query: 34  KDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYV 93
           KDDP KP  LTA LGYKAGMTH+VRD+++PGSK+HK+E  EAVTIIETPPLVVVGVVGYV
Sbjct: 5   KDDPKKPVHLTATLGYKAGMTHVVRDLDRPGSKMHKREVVEAVTIIETPPLVVVGVVGYV 64

Query: 94  KTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKM 153
           +TPRGLR+L TVWA HL+EE++RRFYKNW +SKKKAFTKY KK     G+K +  +LE++
Sbjct: 65  ETPRGLRTLTTVWAAHLSEELKRRFYKNWYRSKKKAFTKYAKKMSEAAGQKSMDRELERI 124

Query: 154 KKYCTVIR--------------KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQK 199
           +KYCTV+R              KKAHLMEIQVNGGS+  KV FA G FE+++ +  +F++
Sbjct: 125 RKYCTVVRVLAHTQIRKTGLKQKKAHLMEIQVNGGSIPDKVAFARGLFEQEVAVSTIFEQ 184

Query: 200 DEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNG 259
           DE++D+IGVTKG G+EGV  RWG  +LPRKTH+GLRKVACIGAWHP++V F+VARAGQNG
Sbjct: 185 DEVVDVIGVTKGHGFEGVTARWGTKKLPRKTHKGLRKVACIGAWHPSKVMFSVARAGQNG 244

Query: 260 YHHRTEMNKKIYKLGKASQESHSAMTEFDRSVYLLSSLMG 299
           YHHRTE+NKKIY++G      + A T+ D +   ++ L G
Sbjct: 245 YHHRTELNKKIYRVGTGGDCKNGA-TDADATDKTITPLGG 283


>gi|146097013|ref|XP_001468007.1| putative ribosomal protein L3 [Leishmania infantum JPCM5]
 gi|146099403|ref|XP_001468635.1| putative ribosomal protein L3 [Leishmania infantum JPCM5]
 gi|134072373|emb|CAM71081.1| putative ribosomal protein L3 [Leishmania infantum JPCM5]
 gi|134073003|emb|CAM71722.1| putative ribosomal protein L3 [Leishmania infantum JPCM5]
          Length = 419

 Score =  352 bits (904), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 173/319 (54%), Positives = 227/319 (71%), Gaps = 19/319 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSH KFEHPRHG LGFLPRKR+ + RG+ +AFPKDD ++   LT+F+ +KAGMTHIVRDV
Sbjct: 1   MSHCKFEHPRHGHLGFLPRKRSRQIRGRARAFPKDDATQKPHLTSFMVFKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  E VTI+E PP+V+VG+VGY +TP GL+++ TVWA H + E RRR+YK
Sbjct: 61  DRPGSKVNKKEVVEPVTILEAPPMVIVGIVGYRQTPVGLKTIGTVWAHHTSVEFRRRYYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR-----------------KK 163
           NW +S + AF++  +   T +GK      L    K  +VIR                 KK
Sbjct: 121 NWKQSAQLAFSRQKQFANTKEGKVAEARTLNAFAKKASVIRVIAHTQLRKLRNHRVGVKK 180

Query: 164 AHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 223
           AH+ EIQ+NGG+VA K+  A    EK++ +D+VFQ+ E  D+  VTKG G EGVV RWGV
Sbjct: 181 AHVQEIQINGGNVAAKIALAKSLLEKEVRVDSVFQQSEACDVCSVTKGHGTEGVVKRWGV 240

Query: 224 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA-SQESHS 282
             LPRKTHRGLRKVACIGAWHPARV +TVARAGQ+GYHHRT++NKKIY++G++ + E + 
Sbjct: 241 ACLPRKTHRGLRKVACIGAWHPARVMYTVARAGQHGYHHRTQLNKKIYQIGRSVAVEPNQ 300

Query: 283 AMTEFDRSVYLLSSLMGSF 301
           A T +D +   ++  MG F
Sbjct: 301 ATTTYDLTAKTITP-MGGF 318


>gi|401428725|ref|XP_003878845.1| putative ribosomal protein L3 [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|401428727|ref|XP_003878846.1| putative ribosomal protein L3 [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|322495094|emb|CBZ30398.1| putative ribosomal protein L3 [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|322495095|emb|CBZ30399.1| putative ribosomal protein L3 [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 419

 Score =  352 bits (903), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 172/319 (53%), Positives = 227/319 (71%), Gaps = 19/319 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSH KFEHPRHG LGFLPRKR+ + RG+ +AFPKDD ++   LT+F+ +KAGMTHIVRDV
Sbjct: 1   MSHCKFEHPRHGHLGFLPRKRSRQIRGRARAFPKDDATQKPHLTSFMVFKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  E VTI+E PP+V+VG+VGY +TP GL+++ TVWA H + E RRR+YK
Sbjct: 61  DRPGSKVNKKEVVEPVTILEAPPMVIVGIVGYRQTPVGLKTIGTVWAHHTSVEFRRRYYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR-----------------KK 163
           NW +S + AF++  +   T +G+      L    K  +VIR                 KK
Sbjct: 121 NWKQSAQLAFSRQKQFANTKEGRIAEARTLNAFAKKASVIRVIAHTQLRKLRNHRVGVKK 180

Query: 164 AHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 223
           AH+ EIQ+NGG+VA K+  A    EK++ +D+VFQ+ E  D+  VTKG G EGVV RWGV
Sbjct: 181 AHVQEIQINGGNVAAKIALAKSLLEKEVRVDSVFQQSEACDVCSVTKGHGTEGVVKRWGV 240

Query: 224 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA-SQESHS 282
             LPRKTHRGLRKVACIGAWHPARV +TVARAGQ+GYHHRT++NKKIY++G++ + E + 
Sbjct: 241 ACLPRKTHRGLRKVACIGAWHPARVMYTVARAGQHGYHHRTQLNKKIYQIGRSVAVEPNQ 300

Query: 283 AMTEFDRSVYLLSSLMGSF 301
           A T +D +   ++  MG F
Sbjct: 301 ATTTYDLTAKTITP-MGGF 318


>gi|401427361|ref|XP_003878164.1| putative ribosomal protein L3 [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|322494411|emb|CBZ29713.1| putative ribosomal protein L3 [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 419

 Score =  351 bits (901), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 172/319 (53%), Positives = 227/319 (71%), Gaps = 19/319 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSH KFEHPRHG LGFLPRKR+ + RG+ +AFPKDD ++   LT+F+ +KAGMTHIVRDV
Sbjct: 1   MSHCKFEHPRHGHLGFLPRKRSRQIRGRTRAFPKDDATQKPHLTSFMVFKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  E VTI+E PP+V+VG+VGY +TP GL+++ TVWA H + E RRR+YK
Sbjct: 61  DRPGSKVNKKEVVEPVTILEAPPMVIVGIVGYRQTPVGLKTIGTVWAHHTSVEFRRRYYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR-----------------KK 163
           NW +S + AF++  +   T +G+      L    K  +VIR                 KK
Sbjct: 121 NWKQSAQLAFSRQKQFANTKEGRVVEARTLNAFAKKASVIRVIAHTQLRKLRNHRVGVKK 180

Query: 164 AHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 223
           AH+ EIQ+NGG+VA K+  A    EK++ +D+VFQ+ E  D+  VTKG G EGVV RWGV
Sbjct: 181 AHVQEIQINGGNVAAKIALAKSLLEKEVRVDSVFQQSEACDVCSVTKGHGTEGVVKRWGV 240

Query: 224 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA-SQESHS 282
             LPRKTHRGLRKVACIGAWHPARV +TVARAGQ+GYHHRT++NKKIY++G++ + E + 
Sbjct: 241 ACLPRKTHRGLRKVACIGAWHPARVMYTVARAGQHGYHHRTQLNKKIYQIGRSVAVEPNQ 300

Query: 283 AMTEFDRSVYLLSSLMGSF 301
           A T +D +   ++  MG F
Sbjct: 301 ATTTYDLTAKTITP-MGGF 318


>gi|444727301|gb|ELW67802.1| 60S ribosomal protein L3-like protein [Tupaia chinensis]
          Length = 927

 Score =  351 bits (900), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 187/355 (52%), Positives = 241/355 (67%), Gaps = 56/355 (15%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHG LGFLP KR+ RHRGKVK +P+DDPS+P  LTAFLGYKAGMTH +R+V
Sbjct: 1   MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHALREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
            +PG K+ K+E  +AVTI+ETPPLVVVGVVGYV TPRGLRS  TV+A+H+++E RRRFYK
Sbjct: 61  HRPGLKISKREEVDAVTIVETPPLVVVGVVGYVATPRGLRSFKTVFAEHISDECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR------------------- 161
           +W +SKKKAFTK  +++   DG+K +Q     M+KYC VIR                   
Sbjct: 121 DWHRSKKKAFTKACRRWRDCDGRKQLQKDFAAMRKYCRVIRVIVHTQAPACGHVEGDREG 180

Query: 162 -------------------------------KKAHLMEIQVNGGSVAQKVDFAYGFFEKQ 190
                                          KKAH+MEIQ+NGG+VA+KV +A    EKQ
Sbjct: 181 PGALAGHVAPQVVVLGLTVLCPQMKLLPFRQKKAHIMEIQLNGGTVAEKVAWAQARLEKQ 240

Query: 191 IPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSF 250
           +P+ +VF + E+ID+I VTKG+G +GV +RW   +LPRKTH+GLRKVACIGAWHPARV  
Sbjct: 241 VPVHSVFSQSEVIDVIAVTKGRGIKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGC 300

Query: 251 TVARAGQNGYHHRTEMNKKIYKLGKA--SQES----HSAMTEFDRSVYLLSSLMG 299
           ++ARAGQ GYHHRTE+NKKIY++G+   +Q+     ++A T +D +   ++ L G
Sbjct: 301 SIARAGQKGYHHRTELNKKIYRIGRGLHTQDGKIVRNNASTSYDVTDKAITPLGG 355


>gi|7417236|gb|AAF62506.1| ribosomal protein L3 [Trypanoplasma borreli]
          Length = 416

 Score =  350 bits (898), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 172/319 (53%), Positives = 226/319 (70%), Gaps = 19/319 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSH KFEHPRHG LGFLPRKR+ + RG+ ++FPKDDPS+   LT+F+ +KAGMTHIVRD+
Sbjct: 1   MSHCKFEHPRHGHLGFLPRKRSRQIRGRCRSFPKDDPSQKPHLTSFMVFKAGMTHIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  E VTI+E PP+ +VGV GY +T  G + + TVWA H+++E RRR+YK
Sbjct: 61  DRPGSKMNKKEVVEPVTILEAPPMAIVGVTGYRETAVGYKCIGTVWAHHVSQEFRRRYYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR-----------------KK 163
           NW +S + AFTK      + +GK   Q  L+ +K   TVIR                 KK
Sbjct: 121 NWKQSAQLAFTKRKSFIRSKNGKVAEQRVLKALKDKATVIRVIAHTQLRKLRNHRVGNKK 180

Query: 164 AHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 223
           AH+ EIQVNGG++  K+  A    EK++ ID++FQ+ E  D+  VTKG G+EGVV RWGV
Sbjct: 181 AHIQEIQVNGGTIEAKLKMAKDLLEKEVRIDSIFQQSETCDVCAVTKGHGFEGVVHRWGV 240

Query: 224 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ-ESHS 282
             LPRK+HRGLRKVACIGAWHPARV +TVARAGQNGYHHRT +NKKIY++G++S  +   
Sbjct: 241 ACLPRKSHRGLRKVACIGAWHPARVMYTVARAGQNGYHHRTHLNKKIYRIGRSSSVDPKQ 300

Query: 283 AMTEFDRSVYLLSSLMGSF 301
           A T +D +  +++  MG F
Sbjct: 301 ATTTYDLTEKVITP-MGGF 318


>gi|291410166|ref|XP_002721357.1| PREDICTED: ribosomal protein L3-like isoform 2 [Oryctolagus
           cuniculus]
          Length = 351

 Score =  348 bits (894), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 175/305 (57%), Positives = 222/305 (72%), Gaps = 44/305 (14%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRK +S+HRGKV   PKDDPSKP  LTAFLGYKAG+THIV++V
Sbjct: 1   MSHRKFSVPRHGSLGFLPRKCSSQHRGKV---PKDDPSKPVHLTAFLGYKAGLTHIVQEV 57

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGS+++KKE  EAVTI+ETPP+VV+G+VGYV+TPRGLR+   ++A+H++++ +RRFYK
Sbjct: 58  DRPGSEVNKKEVVEAVTIVETPPMVVMGIVGYVETPRGLRTFKMMFAEHISDKCKRRFYK 117

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKV 180
           NW KSK                                   KKAHLMEIQVNGG+VA+K+
Sbjct: 118 NWHKSK-----------------------------------KKAHLMEIQVNGGTVAEKL 142

Query: 181 DFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACI 240
           D+A    E+Q+P+  VF +DEMID+IGVTKGKGY+ V +RW   +LP KTHRGLRKVACI
Sbjct: 143 DWARERLEQQVPVSQVFGQDEMIDVIGVTKGKGYKAVTSRWHTKKLPHKTHRGLRKVACI 202

Query: 241 GAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA------SQESHSAMTEFDRSVYLL 294
           GAWHPARV+F+VA AGQ GYHHRTE+NKKIYK+G+           ++A T++D S   +
Sbjct: 203 GAWHPARVAFSVAWAGQKGYHHRTEINKKIYKIGQGYLIKDRKLIKNNASTDYDLSDKSI 262

Query: 295 SSLMG 299
           + L G
Sbjct: 263 NPLGG 267


>gi|378726960|gb|EHY53419.1| 60S ribosomal protein L3 [Exophiala dermatitidis NIH/UT8656]
          Length = 346

 Score =  348 bits (892), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 159/256 (62%), Positives = 208/256 (81%), Gaps = 16/256 (6%)

Query: 47  LGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVW 106
           +GYKAGMT IVRD+++PG+K+HKKE  EAVT+IETPP++VVG+VGY++TPRGLRSL TVW
Sbjct: 1   MGYKAGMTTIVRDLDRPGAKMHKKEIVEAVTVIETPPMIVVGLVGYIETPRGLRSLTTVW 60

Query: 107 AQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR----- 161
           A+HL +E++RRFYKNW +SKKKAFTKY KKY +++    +  +LE++KKYCTV+R     
Sbjct: 61  AEHLGDELKRRFYKNWYRSKKKAFTKYAKKY-SENKSTSVTRELERIKKYCTVVRVLAHT 119

Query: 162 ---------KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGK 212
                    KKAHLMEIQ+NGGS+A KV+F +G FEK + ID +F++DEMID I VTKG 
Sbjct: 120 QIRQTPLKQKKAHLMEIQINGGSIADKVEFGHGLFEKPVEIDTIFEQDEMIDCIAVTKGH 179

Query: 213 GYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYK 272
           G++GV +RWG  +LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ+GYHHRT +N K+Y+
Sbjct: 180 GFQGVTSRWGTKKLPRKTHKGLRKVACIGAWHPSHVQWTVARAGQDGYHHRTSVNHKVYR 239

Query: 273 LGKASQESHSAMTEFD 288
           +GK + E ++A T+FD
Sbjct: 240 IGKGNDEKNAA-TDFD 254


>gi|429862403|gb|ELA37055.1| 60s ribosomal protein l3 [Colletotrichum gloeosporioides Nara gc5]
          Length = 345

 Score =  346 bits (887), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 161/267 (60%), Positives = 211/267 (79%), Gaps = 16/267 (5%)

Query: 47  LGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVW 106
           +GYKAGMT IVRD+++PG+K +KKE  EAV+II+TPP++VVG+VGY++TPRGLRSL TVW
Sbjct: 1   MGYKAGMTTIVRDLDRPGAKANKKEVVEAVSIIDTPPVIVVGIVGYIETPRGLRSLTTVW 60

Query: 107 AQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR----- 161
           A+HL++E+RRRFYKNW KSKKKAFTKY K++    G  +I  ++E++KKYCTV+R     
Sbjct: 61  AEHLSDELRRRFYKNWYKSKKKAFTKYAKQHAESSGA-NITREIERIKKYCTVVRVLAHT 119

Query: 162 ---------KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGK 212
                    KKAHLMEIQ+NGGSV +KVDF YG FEK + + +VF+KDE+ID+I VTKGK
Sbjct: 120 QIRKTPLKQKKAHLMEIQINGGSVPEKVDFGYGLFEKPVEVSSVFEKDEVIDVIAVTKGK 179

Query: 213 GYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYK 272
           G+ GV +RWG  +LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ+GYHHRT +N K+Y+
Sbjct: 180 GFNGVTSRWGTKKLPRKTHKGLRKVACIGAWHPSHVQWTVARAGQDGYHHRTSVNHKVYR 239

Query: 273 LGKASQESHSAMTEFDRSVYLLSSLMG 299
           +GK   + ++A TE D +   ++ L G
Sbjct: 240 IGKGDADDNAA-TELDVTKKTITPLGG 265


>gi|237862632|gb|ACR24941.1| ribosomal protein L3 [Lepidochitona cinerea]
          Length = 351

 Score =  344 bits (883), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 180/296 (60%), Positives = 228/296 (77%), Gaps = 20/296 (6%)

Query: 24  RHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPP 83
           RHRG++KAFPKDDPSKP  LTAFLGYKAGMTHIVR+V++PGSK++KKE  E V+++E PP
Sbjct: 1   RHRGQLKAFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVVEGVSVLEVPP 60

Query: 84  LVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGK 143
           LVVVGVVGYV TP+GLR+  T+WA+HL EE RRRFYKNW +SKKKAFTK +KK++ + GK
Sbjct: 61  LVVVGVVGYVATPKGLRTFNTIWAEHLGEECRRRFYKNWARSKKKAFTKASKKWQDETGK 120

Query: 144 KDIQAQLEKMKKYCTVIR--------------KKAHLMEIQVNGGSVAQKVDFAYGFFEK 189
           K+I+  L KMKKYC V+R              KKAH++EIQ+NGGS+  K+D+A   FEK
Sbjct: 121 KEIEKDLSKMKKYCNVVRVLCHTQTKLMNTRQKKAHIVEIQLNGGSIPDKIDWAKDHFEK 180

Query: 190 QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 249
            +P+  VF +DE+IDIIGVTKGKG +GV +RW   +LPRKTH+GLRKVACIGAWHP+RV 
Sbjct: 181 TVPVQEVFAQDELIDIIGVTKGKGVKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQ 240

Query: 250 FTVARAGQNGYHHRTEMNKKIYKLGKASQE------SHSAMTEFDRSVYLLSSLMG 299
           ++VARAGQ GYHHRTE+NKKIY+LG            ++A TE+D +   ++ + G
Sbjct: 241 YSVARAGQKGYHHRTEINKKIYRLGSGVHTRDGKLVKNNASTEYDPTEKTITPVGG 296


>gi|148682756|gb|EDL14703.1| mCG1036344 [Mus musculus]
          Length = 360

 Score =  343 bits (881), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 180/325 (55%), Positives = 230/325 (70%), Gaps = 29/325 (8%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSH KF  P+HG LGFLP KR+S H  KVK+FPKDD SKP  LT FLGYKAGMTHIV++V
Sbjct: 1   MSHSKFSAPKHGFLGFLPHKRSSWHHRKVKSFPKDDASKPVYLTTFLGYKAGMTHIVQEV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVG-------YVKTPRGLRSLCTVWAQHLNEE 113
           ++PGSK++KKE  EAVTI++  PL              YV++PRGLR+  TV+A+H+++E
Sbjct: 61  DRPGSKVNKKEVVEAVTIVD--PLTPPPPPVVVVGVVGYVESPRGLRTFNTVFAEHISDE 118

Query: 114 VRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVI------------- 160
            + RFYKNW KSKKKAFTKY KK++   GKK ++     MKKYC VI             
Sbjct: 119 CKWRFYKNWHKSKKKAFTKYYKKWQDGTGKKQLEKDSSSMKKYCQVICIIAHTQMRLLPL 178

Query: 161 RKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTR 220
           R+KAHLMEIQV+GG++A K+ +A    E Q+P++ VF +DEMI +I VTKGKGY+GV +R
Sbjct: 179 RQKAHLMEIQVSGGTMADKLGWAQERLELQVPVNQVFGQDEMIIVIDVTKGKGYKGVTSR 238

Query: 221 WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK----- 275
           W   +LPRKTH+GLRKVACIGAWHPARV+F+VA+AGQ GYHHR E N KIYK+G+     
Sbjct: 239 WHTKKLPRKTHQGLRKVACIGAWHPARVAFSVAQAGQKGYHHRKETN-KIYKIGQGYLIK 297

Query: 276 -ASQESHSAMTEFDRSVYLLSSLMG 299
                 ++A T++D S   ++SL G
Sbjct: 298 DGKLIKNNASTDYDLSDKSINSLGG 322


>gi|164659874|ref|XP_001731061.1| hypothetical protein MGL_2060 [Malassezia globosa CBS 7966]
 gi|159104959|gb|EDP43847.1| hypothetical protein MGL_2060 [Malassezia globosa CBS 7966]
          Length = 345

 Score =  343 bits (881), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 170/269 (63%), Positives = 219/269 (81%), Gaps = 17/269 (6%)

Query: 47  LGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVW 106
           +GYKAGMTHIVRD+++PGSK HK+E  EA T+IETPP+VVVG+VGYV+TPRGLRSL TVW
Sbjct: 1   MGYKAGMTHIVRDLDRPGSKYHKREIVEATTVIETPPMVVVGMVGYVETPRGLRSLTTVW 60

Query: 107 AQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR----- 161
           A+HL++EV+RRFYKNW +SKKKAFTKY KK+  ++G+  I  +LE+++KYC+V+R     
Sbjct: 61  AEHLSDEVKRRFYKNWYRSKKKAFTKYAKKHSENNGQ-SIARELERIRKYCSVVRVLAHT 119

Query: 162 ---------KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGK 212
                    KKAHLMEIQVNGGSV++KVDFA   FEK + ++++F +DE++D+IGVTKGK
Sbjct: 120 QLRNTSLKQKKAHLMEIQVNGGSVSEKVDFANNLFEKTVDVNSLFTQDELVDVIGVTKGK 179

Query: 213 GYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYK 272
           GYEGV  RWG+T+LPRKTH+GLRKVACIGAWHPA V FTVAR+GQ+GYHHRTE+NKKIY+
Sbjct: 180 GYEGVTARWGITKLPRKTHKGLRKVACIGAWHPANVMFTVARSGQDGYHHRTELNKKIYR 239

Query: 273 LGKASQESHSAMTEFDRSVYLLSSLMGSF 301
           +G  + ++ S  TEFD +   ++  MG F
Sbjct: 240 IGNGADKA-SGATEFDTTQKSITP-MGGF 266


>gi|340053197|emb|CCC47485.1| putative ribosomal protein L3, fragment [Trypanosoma vivax Y486]
          Length = 646

 Score =  343 bits (880), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 170/290 (58%), Positives = 212/290 (73%), Gaps = 19/290 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSH KFEHPRHG LGFLPRKR+ + RG+ ++FPKDDPS+   LT+F+ YKAGMTHIVRDV
Sbjct: 1   MSHCKFEHPRHGHLGFLPRKRSRQIRGRARSFPKDDPSQKPHLTSFMVYKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  E VTI+E PP+VVVG+VGY +TP G +++ TVWA H + E RRRFYK
Sbjct: 61  DRPGSKVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKAIGTVWAHHTSVEFRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDG-------------KKDI-----QAQLEKMKKYCTVIRK 162
           NW +S + AFTK  +   T +G             K DI       QL K++     + K
Sbjct: 121 NWKQSAQLAFTKRKQFARTKEGRLAEGRMFRAFAKKADIIRVVAHTQLRKLRNNRVGV-K 179

Query: 163 KAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWG 222
           +AH+ EIQ+NGG+V QK++ A    EK+I ID+VFQ+ E  D+  VTKG G+ GVV RWG
Sbjct: 180 RAHVSEIQINGGTVQQKIELAKSLLEKEIRIDSVFQQSEACDVCAVTKGHGFTGVVKRWG 239

Query: 223 VTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYK 272
           V  LPRKTHRGLRKVACIGAWHPARV +TVARAGQ+GYHHRT +NKKIY+
Sbjct: 240 VACLPRKTHRGLRKVACIGAWHPARVMYTVARAGQHGYHHRTHLNKKIYQ 289



 Score =  256 bits (655), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 133/255 (52%), Positives = 173/255 (67%), Gaps = 21/255 (8%)

Query: 66  KLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKS 125
           K+++KE  E VTI+E PP+VVVG+VGY +TP G +++ TVWA H + E RRRFYKNW +S
Sbjct: 286 KIYQKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKAIGTVWAHHTSVEFRRRFYKNWKQS 345

Query: 126 KKKAFTKYTKKYETDDG-------------KKDI-----QAQLEKMKKYCTVIRKKAHLM 167
            + AFTK  +   T +G             K DI       QL K++     + K+AH+ 
Sbjct: 346 AQLAFTKRKQFARTKEGRLAEGRMFRAFAKKADIIRVVAHTQLRKLRNNRVGV-KRAHVS 404

Query: 168 EIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 227
           EIQ+NGG+V QK++ A    EK+I ID+VFQ+ E  D+  VTKG G+ GVV RWGV  LP
Sbjct: 405 EIQINGGTVQQKIELAKSLLEKEIRIDSVFQQSEACDVCAVTKGHGFTGVVKRWGVACLP 464

Query: 228 RKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA-SQESHSAMTE 286
           RKTHRGLRKVACIGAWHPARV +TVARAGQ+GYHHRT +NKKIY++G+A S E + A T 
Sbjct: 465 RKTHRGLRKVACIGAWHPARVMYTVARAGQHGYHHRTHLNKKIYQIGRAVSMEPNQATTA 524

Query: 287 FDRSVYLLSSLMGSF 301
           +D +   ++  MG F
Sbjct: 525 YDLTAKTITP-MGGF 538


>gi|213515418|ref|NP_001133147.1| ribosomal protein L3-like [Salmo salar]
 gi|197632147|gb|ACH70797.1| ribosomal protein L3-like [Salmo salar]
          Length = 409

 Score =  343 bits (880), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 184/321 (57%), Positives = 242/321 (75%), Gaps = 21/321 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHG +GFLP KR+ +HRGK +++P+DDPS+P  LTAF+GYKAGMTHI+R+V
Sbjct: 1   MSHRKFHAPRHGHMGFLPCKRSKKHRGKPRSWPQDDPSQPVHLTAFMGYKAGMTHILREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
            + G K  K+E+ EAVTIIETPP++VVGVVGY+ T RGLRS  T++A+HL++E +RRFYK
Sbjct: 61  HRTGLKQAKRESVEAVTIIETPPVMVVGVVGYIDTVRGLRSFKTIFAEHLSDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           +W KSKKKAFTKY KK+  + GKK ++     MKKYCT IR              KKAH+
Sbjct: 121 SWYKSKKKAFTKYAKKWTDESGKKQLEKDFNNMKKYCTSIRVLIHTQIRLLPLKAKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           ME+Q+NGG++++KVD+     E+ +P+ +VF +DEMID+IGVTKG G +GV +RWGV +L
Sbjct: 181 MEVQLNGGTISEKVDWVKEKLEQPVPVSSVFYQDEMIDVIGVTKGHGMKGVTSRWGVKKL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------ 280
           PRKTH+GLRKVACIGAWHP+RV +T+ARAGQ GYHHRTE+NKKIY++GK           
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVGYTIARAGQKGYHHRTELNKKIYRIGKGIHVQDGKVIK 300

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           ++A T +D +   ++  MG F
Sbjct: 301 NNASTNYDTTQKTITP-MGGF 320


>gi|399949966|gb|AFP65622.1| 60S ribosomal protein L3 [Chroomonas mesostigmatica CCMP1168]
          Length = 388

 Score =  342 bits (878), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 179/305 (58%), Positives = 232/305 (76%), Gaps = 18/305 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSLGFLP+KR  R +GK+K+FPKD  +  C LTA LGYKAGMTH+VR V
Sbjct: 1   MSHRKYESPRHGSLGFLPKKRCQRKKGKIKSFPKDSENSICHLTAALGYKAGMTHVVRTV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHL-NEEVRRRFY 119
           +K GSKLH K+  EAVTI+ETPPL ++G +GY+KTPRGLR+  T+W+  +  EE RR FY
Sbjct: 61  DKLGSKLHGKDCVEAVTILETPPLEIIGYIGYIKTPRGLRAFRTIWSNSIFPEEFRRNFY 120

Query: 120 KNWCKSKKKAFTKYT--KKYETDDGKKDIQAQLEKMKKYCTVIR--------------KK 163
           KNW KSKKKAF+K T  KK E +  + + Q +  ++KK+C+VIR              KK
Sbjct: 121 KNWYKSKKKAFSKKTNLKKMEFNFIEIENQKKKFQIKKFCSVIRCISFSKISKTGLKQKK 180

Query: 164 AHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 223
           A ++EIQVNGG+  +KVDF    F K+I I  +F++ E+ID++G+TKGKG+EGV++RWGV
Sbjct: 181 AKILEIQVNGGNSMEKVDFIEKMFNKEISISDIFKQREIIDVVGITKGKGFEGVISRWGV 240

Query: 224 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSA 283
           T+LPRKTHRG RKVAC+G+WHP+R+SF V RAGQNGYHHRT+ N +IYK+GKAS +  +A
Sbjct: 241 TKLPRKTHRGARKVACVGSWHPSRISFRVPRAGQNGYHHRTQNNIQIYKVGKAS-DPRNA 299

Query: 284 MTEFD 288
            T+FD
Sbjct: 300 STDFD 304


>gi|162605876|ref|XP_001713453.1| 60S ribosomal protein L3 [Guillardia theta]
 gi|13794385|gb|AAK39762.1|AF083031_119 60S ribosomal protein L3 [Guillardia theta]
          Length = 375

 Score =  342 bits (878), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 163/315 (51%), Positives = 227/315 (72%), Gaps = 23/315 (7%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           M+HRKFE PRHGSL FLP+KR  R  GK+K+FPKDD  + C LT  +GYK+GMTH+ R V
Sbjct: 1   MAHRKFEAPRHGSLQFLPKKRCRRTVGKIKSFPKDDICQSCHLTGSIGYKSGMTHVERLV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           + P SK++K+E  +AVTI+ETPP+++VG VGY+KTP+G+RSL TVW   ++E ++R +YK
Sbjct: 61  DLPNSKMNKREVIDAVTILETPPILIVGFVGYIKTPKGIRSLNTVWIDEVDESIKRNYYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKK+FT Y K         +++   E   KYC+++R              +K+ +
Sbjct: 121 NWYKSKKKSFTHYNKIV-------NLKKFKETYFKYCSILRCIISSEIKKIGFKKRKSKI 173

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           +EIQ+NGG    K+D+      K+I ID +F ++E++DIIG++KGKG++GVV+RWGVT+L
Sbjct: 174 LEIQLNGGKPEHKLDYIEKILGKKITIDQIFSENELVDIIGISKGKGFQGVVSRWGVTKL 233

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRG RKVAC+G+WHP+RVSFTVARAGQ+GYHHRT +N KIY +GK    S+  +T 
Sbjct: 234 PRKTHRGARKVACVGSWHPSRVSFTVARAGQSGYHHRTSLNIKIYAIGKDGFISNHILTN 293

Query: 287 FDRSVYLLSSLMGSF 301
            ++S + ++  MG F
Sbjct: 294 -NKSNFSINP-MGGF 306


>gi|426255009|ref|XP_004021160.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L3-like [Ovis
           aries]
          Length = 491

 Score =  342 bits (876), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 180/319 (56%), Positives = 226/319 (70%), Gaps = 33/319 (10%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHG LGFLP KR+ RHRGKVK +P+DDPS+P  LTAFLGYKAGMTH +R+V
Sbjct: 98  MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 157

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
            +PG K+ K+E  EAVTI+ETPPLVVVGVVGYV             A HL++E RRRFYK
Sbjct: 158 HRPGLKISKREEVEAVTIVETPPLVVVGVVGYV-------------AXHLSDECRRRFYK 204

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           +W KSKKKAFTK  K++   DGKK +Q     MKKYC VIR              KKAH+
Sbjct: 205 DWHKSKKKAFTKACKRWRDADGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHI 264

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           ME+Q+NGG+VA+KV +     EKQ+P+ +VF ++E+ID+I VTKG+G +GV +RW   +L
Sbjct: 265 MEVQLNGGTVAEKVAWVQARLEKQVPVHSVFSQNEVIDVIAVTKGRGVKGVTSRWHTKKL 324

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------ 280
           PRKTH+GLRKVACIGAWHPARV  ++ARAGQ GYHH TE+NKKIY++G+           
Sbjct: 325 PRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHLTELNKKIYRIGRGLHTEDGKVVK 384

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T +D +   ++ L G
Sbjct: 385 NNASTSYDVTDKSITPLGG 403


>gi|118389862|ref|XP_001027976.1| ribosomal protein L3 containing protein [Tetrahymena thermophila]
 gi|74894030|sp|O96774.1|RL3_TETTH RecName: Full=Ribosomal protein L3
 gi|358440087|pdb|4A17|B Chain B, T.Thermophila 60s Ribosomal Subunit In Complex With
           Initiation Factor 6. This File Contains 5s Rrna, 5.8s
           Rrna And Proteins Of Molecule 2.
 gi|358440133|pdb|4A1A|B Chain B, T.Thermophila 60s Ribosomal Subunit In Complex With
           Initiation Factor 6. This File Contains 5s Rrna, 5.8s
           Rrna And Proteins Of Molecule 3.
 gi|358440179|pdb|4A1C|B Chain B, T.Thermophila 60s Ribosomal Subunit In Complex With
           Initiation Factor 6. This File Contains 5s Rrna, 5.8s
           Rrna And Proteins Of Molecule 4.
 gi|358440225|pdb|4A1E|B Chain B, T.Thermophila 60s Ribosomal Subunit In Complex With
           Initiation Factor 6. This File Contains 5s Rrna, 5.8s
           Rrna And Proteins Of Molecule 1
 gi|3861468|emb|CAA10068.1| ribosomal protein L3 [Tetrahymena thermophila]
 gi|89309746|gb|EAS07734.1| ribosomal protein L3 containing protein [Tetrahymena thermophila
           SB210]
          Length = 391

 Score =  341 bits (875), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 172/313 (54%), Positives = 229/313 (73%), Gaps = 19/313 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSLGF PR+R   HRG+ ++FPKDDPSK   LTAF G+KAGMTHI+R+V
Sbjct: 1   MSHRKFEAPRHGSLGFRPRRRTRHHRGRCRSFPKDDPSKKPHLTAFTGFKAGMTHILREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++ GS+ +KKE  EAVT+IE PP+ +VGVVGY+ TPRGLR+L TVWA+ ++   ++RFYK
Sbjct: 61  DRSGSRHNKKEVVEAVTVIECPPMTIVGVVGYIDTPRGLRALTTVWAKTIDNNTKKRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW  S KKAFT + K +  D   +D+   L++++KYC+V+R              KK H+
Sbjct: 121 NWANSNKKAFTHHEKNF--DQKAQDL--LLKRIEKYCSVVRVIAHTNMSKLNLRQKKNHI 176

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           +EIQVNGG VA+KV FA    EK++ +D++F ++EM+D++GVTKGKG+ GV+ R+GV  L
Sbjct: 177 LEIQVNGGKVAEKVAFAKSLLEKEVKVDSIFAENEMLDVLGVTKGKGFAGVIKRFGVKHL 236

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
            +KTHRG RKV CIGAWHP+R+ FTV RAGQ GYHHRTE NKK+Y++GK    S +A T 
Sbjct: 237 QKKTHRGYRKVGCIGAWHPSRIRFTVPRAGQLGYHHRTETNKKVYRVGKGDDAS-NASTA 295

Query: 287 FDRSVYLLSSLMG 299
            D +   ++ L G
Sbjct: 296 GDVTDKAITPLGG 308


>gi|148697895|gb|EDL29842.1| mCG129893 [Mus musculus]
          Length = 358

 Score =  340 bits (872), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 168/274 (61%), Positives = 213/274 (77%), Gaps = 21/274 (7%)

Query: 47  LGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPP-LVVVGVVGYVKTPRGLRSLCTV 105
           LGYKAGMTHIVR+V++PGSK++KKE  EAVTI+ETPP +VVVG+VGYV+TP+GLR+  TV
Sbjct: 1   LGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPPMVVVGIVGYVETPQGLRTFKTV 60

Query: 106 WAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---- 161
           +A+H+++E +R FYKNW KSKKKAFTKY KK++ D GKK ++     MKKYC VIR    
Sbjct: 61  FAEHISDECKRHFYKNWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAH 120

Query: 162 ----------KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKG 211
                     KKAHLMEIQVNGG+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTKG
Sbjct: 121 TQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKG 180

Query: 212 KGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIY 271
           KGY+GV +RW   +LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIY
Sbjct: 181 KGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIY 240

Query: 272 KLGK------ASQESHSAMTEFDRSVYLLSSLMG 299
           K+G+           ++A T++D S   ++ L G
Sbjct: 241 KIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGG 274


>gi|160331207|ref|XP_001712311.1| rpl3 [Hemiselmis andersenii]
 gi|159765758|gb|ABW97986.1| rpl3 [Hemiselmis andersenii]
          Length = 388

 Score =  339 bits (869), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 174/316 (55%), Positives = 231/316 (73%), Gaps = 18/316 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSLGFLP+KR  R +GK+K+FPKD+ + PC LTA +G+KAGMTH+VR V
Sbjct: 1   MSHRKYEAPRHGSLGFLPKKRCRRGKGKIKSFPKDNENHPCHLTASIGFKAGMTHVVRTV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWA-QHLNEEVRRRFY 119
           +K GSKLH K+  EAVT+IETPPL +VG VGY+KTP+GLRS  TVW+  +  EE +R FY
Sbjct: 61  DKFGSKLHGKDVVEAVTVIETPPLQIVGFVGYIKTPKGLRSFRTVWSTNNFPEEFKRNFY 120

Query: 120 KNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEK--MKKYCTVIR--------------KK 163
           KNW KSK+KAF K  K     +G    + Q  K  +KK+C +IR              KK
Sbjct: 121 KNWYKSKRKAFKKKQKTELEYNGFSVFENQKIKFQIKKFCPIIRCIAFSKISKTGLKQKK 180

Query: 164 AHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 223
           A ++EIQ+NGG+  QK++F     +K+I I  +F++ E+ID IG+TKGKG++GV+ RWGV
Sbjct: 181 APVLEIQINGGNTTQKINFVEKISQKEISISDIFRQREIIDTIGITKGKGFQGVIKRWGV 240

Query: 224 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSA 283
           T+LPRKTHRG RKVAC+G+WHP+RVSF V RAGQ G+HHRT++N +IY++GKA  +S++ 
Sbjct: 241 TKLPRKTHRGARKVACVGSWHPSRVSFRVPRAGQTGFHHRTQINLQIYRVGKA-LDSNNG 299

Query: 284 MTEFDRSVYLLSSLMG 299
            TEFD S   ++ + G
Sbjct: 300 STEFDLSTKKITPMGG 315


>gi|119580718|gb|EAW60314.1| ribosomal protein L3, isoform CRA_e [Homo sapiens]
 gi|119580723|gb|EAW60319.1| ribosomal protein L3, isoform CRA_e [Homo sapiens]
 gi|355563684|gb|EHH20246.1| hypothetical protein EGK_03058 [Macaca mulatta]
 gi|390407371|dbj|BAM21009.1| hypothetical protein, partial [Homo sapiens]
          Length = 351

 Score =  338 bits (867), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 164/267 (61%), Positives = 209/267 (78%), Gaps = 20/267 (7%)

Query: 53  MTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNE 112
           MTHIVR+V++PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  TV+A+H+++
Sbjct: 1   MTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISD 60

Query: 113 EVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR----------- 161
           E +RRFYKNW KSKKKAFTKY KK++ +DGKK ++     MKKYC VIR           
Sbjct: 61  ECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP 120

Query: 162 ---KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVV 218
              KKAHLMEIQVNGG+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV 
Sbjct: 121 LRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVT 180

Query: 219 TRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK--- 275
           +RW   +LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+   
Sbjct: 181 SRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYL 240

Query: 276 ---ASQESHSAMTEFDRSVYLLSSLMG 299
                   ++A T++D S   ++ L G
Sbjct: 241 IKDGKLIKNNASTDYDLSDKSINPLGG 267


>gi|8572153|gb|AAF77028.1|AF247847_1 ribosomal protein L3 [Caenorhabditis briggsae]
          Length = 246

 Score =  335 bits (858), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 156/246 (63%), Positives = 192/246 (78%), Gaps = 14/246 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHG +GF P+KR+  +RG++KAFPKDD SKP  LTAFLGYKAGMTHIVRDV
Sbjct: 1   MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDASKPIHLTAFLGYKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           +KPGSK++KKE  EAV+IIETPP+V+ GV GY+ TP+G R+L T+WA+HL+EE RRRFY 
Sbjct: 61  DKPGSKVNKKEVVEAVSIIETPPMVIAGVTGYIDTPQGPRALTTIWAEHLSEEARRRFYS 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ +DGKK I+A   K+KKYC+ IR              KKAHL
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           +EIQ+NGG++ QKVD+A    EKQI +D VF +DEMID IGVTKG G++GV +RW   +L
Sbjct: 181 VEIQINGGTIEQKVDWAREHLEKQIQVDTVFSQDEMIDTIGVTKGHGFKGVTSRWHTKKL 240

Query: 227 PRKTHR 232
           PRKTH+
Sbjct: 241 PRKTHK 246


>gi|395757075|ref|XP_002834695.2| PREDICTED: 60S ribosomal protein L3-like, partial [Pongo abelii]
          Length = 264

 Score =  334 bits (857), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 162/264 (61%), Positives = 207/264 (78%), Gaps = 20/264 (7%)

Query: 54  THIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEE 113
           THIVR+V++PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  TV+A+H+++E
Sbjct: 1   THIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDE 60

Query: 114 VRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR------------ 161
            +RRFYKNW KSKKKAFTKY KK++ +DGKK ++     MKKYC VIR            
Sbjct: 61  CKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPL 120

Query: 162 --KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVT 219
             KKAHLMEIQVNGG+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV +
Sbjct: 121 RQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTS 180

Query: 220 RWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK---- 275
           RW   +LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+    
Sbjct: 181 RWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLI 240

Query: 276 --ASQESHSAMTEFDRSVYLLSSL 297
                  ++A T++D S   ++ L
Sbjct: 241 KDGKLIKNNASTDYDLSDKSINPL 264


>gi|167535326|ref|XP_001749337.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163772203|gb|EDQ85858.1| predicted protein [Monosiga brevicollis MX1]
          Length = 419

 Score =  333 bits (855), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 177/292 (60%), Positives = 212/292 (72%), Gaps = 14/292 (4%)

Query: 2   SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
           SHRKF  PRHG LGFLP+KR   HRG++++FPK+       LTAFLGYKAGMTHIVRD++
Sbjct: 21  SHRKFRAPRHGHLGFLPKKRCKHHRGQIRSFPKEQKGDKPHLTAFLGYKAGMTHIVRDLD 80

Query: 62  KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
           + GS  HKKE  EAVT++ETPP+VVVGVVGY  TPRGLR L TVWA H+ E   RR YK+
Sbjct: 81  RTGSLAHKKEVVEAVTVVETPPIVVVGVVGYTSTPRGLRQLTTVWATHMAEGFIRRCYKH 140

Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLM 167
           +  SKK AF KY  K  T +G++     L +M KYC+VIR              KKAH+M
Sbjct: 141 FAASKKAAFRKYFSKRNTPEGQQQFDDDLARMVKYCSVIRVIVHTQMKKLNLGQKKAHVM 200

Query: 168 EIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 227
           EIQ+NGGS+ +KVDFA    EK++PI  VF ++E IDIIGVTKG G+EGV  RWG  +LP
Sbjct: 201 EIQINGGSIQEKVDFAKSLLEKEVPIKDVFSQNEHIDIIGVTKGHGFEGVTHRWGTKKLP 260

Query: 228 RKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
           RKTH+GLRKVACIGAWHPA V++ V RAGQ GYHHRTEMNKKIY++G    E
Sbjct: 261 RKTHKGLRKVACIGAWHPANVTYAVPRAGQRGYHHRTEMNKKIYRIGAGYHE 312


>gi|342180583|emb|CCC90059.1| putative ribosomal protein L3, mitochondrial [Trypanosoma
           congolense IL3000]
          Length = 428

 Score =  332 bits (852), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 171/320 (53%), Positives = 219/320 (68%), Gaps = 22/320 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGM-THIVRD 59
           MSH KFEHPRHG LGFLPRKR+ + RG+ ++FPKDDPS+   LT+F+ YKA    H  R 
Sbjct: 1   MSHCKFEHPRHGHLGFLPRKRSRQIRGRARSFPKDDPSQKPHLTSFMVYKAXYDAHCAR- 59

Query: 60  VEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFY 119
             +PGSK++KKE  E VTI+E PP+VVVG VGY +TP G +++ TVWA H + E RRRFY
Sbjct: 60  -RRPGSKVNKKEVVEPVTILEAPPMVVVGFVGYRQTPVGHKTIGTVWAHHTSVEFRRRFY 118

Query: 120 KNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR-----------------K 162
           KNW +S + AFTK  +   T +G+      L+   K   +IR                 K
Sbjct: 119 KNWKQSAQLAFTKRKQFARTTEGRLAEARTLKAFAKKADIIRVVAHTQLRKLRNNRVGVK 178

Query: 163 KAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWG 222
           KAH+ EIQ+NGG++AQK++ A    EK++ ID+VFQ+ E  D+  VTKG G+ GVV RWG
Sbjct: 179 KAHVSEIQINGGTIAQKIELAKSLLEKEVRIDSVFQQSEACDVCAVTKGHGFTGVVKRWG 238

Query: 223 VTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA-SQESH 281
           V  LPRKTHRGLRKVACIGAWHP+RV +TVARAGQ+GYHHRT +NKKIY+LG+A S E +
Sbjct: 239 VACLPRKTHRGLRKVACIGAWHPSRVMYTVARAGQHGYHHRTHLNKKIYQLGRAVSMEPN 298

Query: 282 SAMTEFDRSVYLLSSLMGSF 301
            A T +D +   ++  MG F
Sbjct: 299 QATTSYDLTAKTITP-MGGF 317


>gi|7159730|emb|CAB76201.1| ribosomal protein L3 [Homo sapiens]
          Length = 343

 Score =  331 bits (849), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 161/264 (60%), Positives = 206/264 (78%), Gaps = 20/264 (7%)

Query: 56  IVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVR 115
           IVR+V++PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  TV+A+H+++E +
Sbjct: 1   IVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECK 60

Query: 116 RRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR-------------- 161
           RRFYKNW KSKKKAFTKY KK++ +DGKK ++     MKKYC VIR              
Sbjct: 61  RRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQ 120

Query: 162 KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRW 221
           KKAHLMEIQVNGG+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW
Sbjct: 121 KKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRW 180

Query: 222 GVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ 275
              +LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+      
Sbjct: 181 HTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKD 240

Query: 276 ASQESHSAMTEFDRSVYLLSSLMG 299
                ++A T++D S   ++ L G
Sbjct: 241 GKLIKNNASTDYDLSDKSINPLGG 264


>gi|78190599|gb|ABB29621.1| ribosomal protein 3 large subunit [Priapulus caudatus]
          Length = 319

 Score =  327 bits (839), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 161/266 (60%), Positives = 204/266 (76%), Gaps = 21/266 (7%)

Query: 56  IVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVR 115
           IVR+VEKPGSKL+KKE  EAVTIIETPPLV+VGV+GY++TPRGLR+L TV+A+HL+E+ R
Sbjct: 1   IVREVEKPGSKLNKKEVVEAVTIIETPPLVIVGVIGYIETPRGLRTLKTVFAEHLSEDCR 60

Query: 116 RRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR-------------- 161
           RRFYKNW K+K+KAFTKY KK++ + GKK I  + EKMKKYCTVIR              
Sbjct: 61  RRFYKNWYKAKRKAFTKYAKKWQDEVGKKQIDREFEKMKKYCTVIRVVAHTQMKLLRKRQ 120

Query: 162 KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRW 221
           KKAH+MEIQ+NGG++A+KV +A    EK +PI +VF  DEMID++GVTKG G++GV +RW
Sbjct: 121 KKAHIMEIQLNGGTIAEKVQWACDHLEKAVPISSVFAADEMIDMVGVTKGHGFKGVTSRW 180

Query: 222 GVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE-- 279
              +LPRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYHHRTE+NKK+Y++ +      
Sbjct: 181 HCKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEINKKVYRIAEGIHTKD 240

Query: 280 ----SHSAMTEFDRSVYLLSSLMGSF 301
                ++A T+FD S   ++  MG F
Sbjct: 241 GKVIKNNAATDFDLSDKSITP-MGGF 265


>gi|440292698|gb|ELP85882.1| 60S ribosomal protein L3, putative [Entamoeba invadens IP1]
          Length = 402

 Score =  327 bits (838), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 164/302 (54%), Positives = 207/302 (68%), Gaps = 16/302 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSL F PRKR  R R    AFPKD  +    LT FLG+KAGMTH++R+V
Sbjct: 1   MSHRKFEAPRHGSLAFHPRKRVHRLRAATSAFPKDKTTDKPHLTGFLGFKAGMTHVIREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++  +KL K    E VTIIETPP+V VG VGY KT +GLR +  V+A+H+++E +RR+ K
Sbjct: 61  KRTNTKLPKDGILEPVTIIETPPMVCVGFVGYRKTVKGLRQMSVVFAEHISDEFKRRYSK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KS ++ F  +T+ Y     K   +  ++ MK     IR              KKA +
Sbjct: 121 NWKKSNRRQFAVHTETYNDVKVKAKRERIIKMMKNNADFIRIIAHTQMALVPLKQKKAEV 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGGS+A K+DFA G  EKQI +D++F KDE IDI+ VTKG G+ GV+ R+GV  L
Sbjct: 181 MEIQVNGGSIADKIDFATGLLEKQISVDSIFGKDEPIDIVAVTKGHGFNGVIKRFGVRHL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVAC+GAWHPARV +TVARAGQ G+  RTE+NKKIY++G  +    +A TE
Sbjct: 241 PRKTHRGLRKVACVGAWHPARVGWTVARAGQMGFFKRTEVNKKIYRIGAGALR--NANTE 298

Query: 287 FD 288
           FD
Sbjct: 299 FD 300


>gi|67472477|ref|XP_652042.1| 60S ribosomal protein L3 [Entamoeba histolytica HM-1:IMSS]
 gi|67473369|ref|XP_652451.1| 60S ribosomal protein L3 [Entamoeba histolytica HM-1:IMSS]
 gi|67475438|ref|XP_653413.1| 60S ribosomal protein L3 [Entamoeba histolytica HM-1:IMSS]
 gi|167386238|ref|XP_001737679.1| 60S ribosomal protein L3 [Entamoeba dispar SAW760]
 gi|167388407|ref|XP_001738553.1| 60S ribosomal protein L3 [Entamoeba dispar SAW760]
 gi|56468865|gb|EAL46673.1| 60S ribosomal protein L3, putative [Entamoeba histolytica
           HM-1:IMSS]
 gi|56469305|gb|EAL47065.1| 60S ribosomal protein L3, putative [Entamoeba histolytica
           HM-1:IMSS]
 gi|56470361|gb|EAL48027.1| 60S ribosomal protein L3, putative [Entamoeba histolytica
           HM-1:IMSS]
 gi|165898153|gb|EDR25097.1| 60S ribosomal protein L3, putative [Entamoeba dispar SAW760]
 gi|165899449|gb|EDR26038.1| 60S ribosomal protein L3, putative [Entamoeba dispar SAW760]
          Length = 402

 Score =  327 bits (837), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 164/302 (54%), Positives = 208/302 (68%), Gaps = 16/302 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSL F PRKR  + R  V AFPKD+ ++   LT FLG+KAGMTH++R+V
Sbjct: 1   MSHRKFEAPRHGSLAFHPRKRVHKVRATVSAFPKDNAAEKPHLTGFLGFKAGMTHVIREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++  +KL K    E VTIIETPP+VV G VGY KT  GL+ +  V+A+H+ +E +RR+ K
Sbjct: 61  KRTNTKLPKDGVLEPVTIIETPPMVVAGFVGYKKTTTGLKPITAVFAEHIADEFKRRYTK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
            W K+ K  F  +T+KY     K   + Q+  +K  C V+R              KKA +
Sbjct: 121 KWYKNTKNQFAVHTEKYNDVKAKSKRERQIRLIKNRCDVVRVIAHTQMALVPLKQKKAEV 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQ+NGGS+A+KVDFA    EKQI +++VF  DE ID+  VTKG GY GV+ R+GV  L
Sbjct: 181 MEIQINGGSIAEKVDFAVSLLEKQISVNSVFGTDECIDVCSVTKGHGYNGVIKRFGVRHL 240

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKTHRGLRKVAC+GAWHPARVS+TVARAGQ G+  RTE+NKKIY+LG    +  +A TE
Sbjct: 241 PRKTHRGLRKVACVGAWHPARVSWTVARAGQMGFFKRTEVNKKIYRLG--CGDLKNAKTE 298

Query: 287 FD 288
           FD
Sbjct: 299 FD 300


>gi|358339475|dbj|GAA47534.1| 60S ribosomal protein L3 [Clonorchis sinensis]
          Length = 276

 Score =  326 bits (836), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 161/261 (61%), Positives = 191/261 (73%), Gaps = 35/261 (13%)

Query: 14  LGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 73
           +GF P+KR+ R RGK KAFPKD  S P  LTAFLGYKAGMTHIVR+V++PGSK+HK+E  
Sbjct: 1   MGFTPKKRSRRIRGKCKAFPKDRRSLPPHLTAFLGYKAGMTHIVREVDRPGSKVHKREIV 60

Query: 74  EAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKY 133
           E VTI+E PP+V+VG+VGY  T RGLR+  TVWA+HL EE RRRFYK+WCKSKKKA    
Sbjct: 61  EPVTILECPPMVIVGLVGYAPTARGLRTFKTVWAEHLTEECRRRFYKDWCKSKKKA---- 116

Query: 134 TKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPI 193
                                          H+MEIQVNGG+V+QKVD+    FEKQIPI
Sbjct: 117 -------------------------------HIMEIQVNGGTVSQKVDWIRQHFEKQIPI 145

Query: 194 DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVA 253
             VF +DEMID+IGVTKGKG++GV +RW   +LPRKTH+GLRKVACIG+WHPARV  TVA
Sbjct: 146 VNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGSWHPARVGSTVA 205

Query: 254 RAGQNGYHHRTEMNKKIYKLG 274
           RAGQ GY HRTE+NKKIY++G
Sbjct: 206 RAGQKGYFHRTELNKKIYRIG 226


>gi|384488486|gb|EIE80666.1| 60S ribosomal protein L3 [Rhizopus delemar RA 99-880]
          Length = 341

 Score =  326 bits (835), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 166/269 (61%), Positives = 211/269 (78%), Gaps = 18/269 (6%)

Query: 47  LGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVW 106
           +GYKAGMTHIVRD+E+PGSK+HKKE  EAVT+IE P +VVVGVVGYV+TPRGLRSL TVW
Sbjct: 1   MGYKAGMTHIVRDLERPGSKMHKKEIVEAVTVIEAPAMVVVGVVGYVETPRGLRSLTTVW 60

Query: 107 AQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR----- 161
           A+HL+EE +RRFYKNW +SKKKAFTKY +KY   +G KD+  +LE++KKYC+V+R     
Sbjct: 61  AEHLSEEAKRRFYKNWYRSKKKAFTKYAQKYA--EGAKDVTRELERIKKYCSVVRVIAHT 118

Query: 162 ---------KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGK 212
                    +KAH+MEIQ+NGGSV QKVD+A   FEK++ + ++F++DEMIDII  TKG 
Sbjct: 119 QISKAKLHQRKAHIMEIQLNGGSVEQKVDWAREHFEKEVTVGSIFEQDEMIDIIATTKGH 178

Query: 213 GYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYK 272
           G+EGV  RWG  +LPRKTHRGLRKVACIGAWHP+RV ++VARAGQ GYH RTE+NKKIY+
Sbjct: 179 GFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPSRVMYSVARAGQRGYHRRTEINKKIYR 238

Query: 273 LGKASQESHSAMTEFDRSVYLLSSLMGSF 301
           +   + ++ S  TE+D +   ++  MG F
Sbjct: 239 IATGA-DAKSGTTEYDLTEKQITP-MGGF 265


>gi|78190647|gb|ABB29645.1| ribosomal protein 3 large subunit [Suberites fuscus]
          Length = 313

 Score =  324 bits (831), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 156/248 (62%), Positives = 196/248 (79%), Gaps = 16/248 (6%)

Query: 56  IVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVR 115
           I+R++ +PGSK HK E  EAVTIIETPP++VVGVVGY++TPRGLR + T++AQHLN+E R
Sbjct: 1   ILREMNRPGSKSHKHEVVEAVTIIETPPMMVVGVVGYIETPRGLRPIKTIFAQHLNDECR 60

Query: 116 RRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR-------------- 161
           RRFYKNW  SKKKAF+K + +++ + G+K IQA  +K+KKYC VIR              
Sbjct: 61  RRFYKNWFNSKKKAFSKASGRWKDEAGQKSIQADFDKLKKYCKVIRVICHTQVELLNGVR 120

Query: 162 -KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTR 220
            KKAH+MEIQVNGGS++ KVD+A    EK IPI  +F KDEMIDIIGVTKGKG++GV +R
Sbjct: 121 QKKAHIMEIQVNGGSISDKVDWAKEHMEKAIPIKDLFNKDEMIDIIGVTKGKGFKGVTSR 180

Query: 221 WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           W   +LPRKTH+GLRKVACIGAWHP+RVSF+VARAGQ GYHHRTE+NKKIY++G   +++
Sbjct: 181 WHCKKLPRKTHKGLRKVACIGAWHPSRVSFSVARAGQKGYHHRTEINKKIYRIGD-KEDN 239

Query: 281 HSAMTEFD 288
            +A TEFD
Sbjct: 240 ANAATEFD 247


>gi|123445156|ref|XP_001311341.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121893146|gb|EAX98411.1| hypothetical protein TVAG_125550 [Trichomonas vaginalis G3]
          Length = 415

 Score =  318 bits (815), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 168/338 (49%), Positives = 220/338 (65%), Gaps = 42/338 (12%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PR GSLGFLPR R+   RG+V+++PKDD S+   L AF+GYKAGMTH++RDV
Sbjct: 1   MSHRKFNAPRRGSLGFLPRGRSHAVRGRVRSWPKDDASQKPHLCAFIGYKAGMTHVLRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
            +P S+LHKKE CE VTI+ETPP+ VVG++GY  T  GL+ + TVWA ++NEEV+R +YK
Sbjct: 61  VRPNSRLHKKEACEPVTILETPPMFVVGIIGYKPTVEGLKPVTTVWASYVNEEVKRNYYK 120

Query: 121 NWCKSK-KKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR------------------ 161
           NW +SK +KAF+  +     +  +K    QLEK++K  TVIR                  
Sbjct: 121 NWYQSKARKAFSCLSNGKAAEKREK----QLEKLQKEATVIRVIAHTQSAKTTTRGVDAN 176

Query: 162 ---------------KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDII 206
                          KKAH++EIQ+NGG VA K+++A    EK+I +  VF + E ID I
Sbjct: 177 EQGAKKVLKGNHLGQKKAHMIEIQINGGDVAAKLNYAKSILEKEIKVADVFTEGEQIDTI 236

Query: 207 GVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEM 266
           GV KG G+EGV+ R+G  RL +KTHRG RKVACIG W+PARV ++VAR GQ G HHRTEM
Sbjct: 237 GVGKGFGWEGVIHRYGTKRLQKKTHRGRRKVACIGPWNPARVLWSVARYGQRGCHHRTEM 296

Query: 267 NKKIYKLGKASQE---SHSAMTEFDRSVYLLSSLMGSF 301
           NK+IY++G A  E   +    T FD +   ++  MG F
Sbjct: 297 NKRIYRIGAAEVEGKINEGGSTSFDLTKKSINP-MGGF 333


>gi|154422961|ref|XP_001584492.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121918739|gb|EAY23506.1| hypothetical protein TVAG_071700 [Trichomonas vaginalis G3]
          Length = 415

 Score =  317 bits (812), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 167/338 (49%), Positives = 220/338 (65%), Gaps = 42/338 (12%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PR GSLGFLPR R+   RG+V+++PKDD S+   L AF+GYKAGMTH++RDV
Sbjct: 1   MSHRKFNAPRRGSLGFLPRGRSHAVRGRVRSWPKDDASQKPHLCAFIGYKAGMTHVLRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
            +P S+LHKKE CE VTI+ETPP+ VVG++GY  T  GL+ + TVWA ++NEEV+R +YK
Sbjct: 61  VRPNSRLHKKEACEPVTILETPPMFVVGIIGYKPTIEGLKPVTTVWASYVNEEVKRNYYK 120

Query: 121 NWCKSK-KKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR------------------ 161
           NW +SK +KAF+  +     +  +K    QLE+++K  TVIR                  
Sbjct: 121 NWYQSKARKAFSCLSNGKAAEKREK----QLEELQKEATVIRVIAHTQSAKTTTRGVDAN 176

Query: 162 ---------------KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDII 206
                          KKAH++EIQ+NGG VA K+++A    EK+I +  VF + E ID I
Sbjct: 177 EQGAKKVLKGNHLGQKKAHMIEIQINGGDVAAKLNYAKSILEKEIKVADVFTEGEQIDTI 236

Query: 207 GVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEM 266
           GV KG G+EGV+ R+G  RL +KTHRG RKVACIG W+PARV ++VAR GQ G HHRTEM
Sbjct: 237 GVGKGFGWEGVIHRYGTKRLQKKTHRGRRKVACIGPWNPARVLWSVARYGQRGCHHRTEM 296

Query: 267 NKKIYKLGKASQE---SHSAMTEFDRSVYLLSSLMGSF 301
           NK+IY++G A  E   +    T FD +   ++  MG F
Sbjct: 297 NKRIYRIGAAEVEGKINEGGSTSFDLTKKSINP-MGGF 333


>gi|123440132|ref|XP_001310830.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|123470017|ref|XP_001318217.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|154419020|ref|XP_001582527.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121892616|gb|EAX97900.1| hypothetical protein TVAG_059650 [Trichomonas vaginalis G3]
 gi|121900970|gb|EAY05994.1| hypothetical protein TVAG_124190 [Trichomonas vaginalis G3]
 gi|121916763|gb|EAY21541.1| hypothetical protein TVAG_013060 [Trichomonas vaginalis G3]
          Length = 415

 Score =  317 bits (812), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 167/338 (49%), Positives = 220/338 (65%), Gaps = 42/338 (12%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PR GSLGFLPR R+   RG+V+++PKDD S+   L AF+GYKAGMTH++RDV
Sbjct: 1   MSHRKFNAPRRGSLGFLPRGRSHAVRGRVRSWPKDDASQKPHLCAFIGYKAGMTHVLRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
            +P S+LHKKE CE VTI+ETPP+ VVG++GY  T  GL+ + TVWA ++NEEV+R +YK
Sbjct: 61  VRPNSRLHKKEACEPVTILETPPMFVVGIIGYKPTVEGLKPVTTVWASYVNEEVKRNYYK 120

Query: 121 NWCKSK-KKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR------------------ 161
           NW +SK +KAF+  +     +  +K    QLE+++K  TVIR                  
Sbjct: 121 NWYQSKARKAFSCLSNGKAAEKREK----QLEELQKEATVIRVIAHTQSAKTTTRGVDAN 176

Query: 162 ---------------KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDII 206
                          KKAH++EIQ+NGG VA K+++A    EK+I +  VF + E ID I
Sbjct: 177 EQGAKKVLKGNHLGQKKAHMIEIQINGGDVAAKLNYAKSILEKEIKVADVFTEGEQIDTI 236

Query: 207 GVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEM 266
           GV KG G+EGV+ R+G  RL +KTHRG RKVACIG W+PARV ++VAR GQ G HHRTEM
Sbjct: 237 GVGKGFGWEGVIHRYGTKRLQKKTHRGRRKVACIGPWNPARVLWSVARYGQRGCHHRTEM 296

Query: 267 NKKIYKLGKASQE---SHSAMTEFDRSVYLLSSLMGSF 301
           NK+IY++G A  E   +    T FD +   ++  MG F
Sbjct: 297 NKRIYRIGAAEVEGKINEGGSTSFDLTKKSINP-MGGF 333


>gi|78190703|gb|ABB29673.1| ribosomal protein 3 large subunit [Leucosolenia sp. AR-2003]
          Length = 319

 Score =  315 bits (808), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 149/266 (56%), Positives = 200/266 (75%), Gaps = 21/266 (7%)

Query: 56  IVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVR 115
           IVR+V+KPGS+ HKKE  EA TI+ETPP++ VGVVGY++TPRGLR+  TVWA+HL++E R
Sbjct: 1   IVREVDKPGSRNHKKEVVEAATILETPPMIAVGVVGYIETPRGLRTFKTVWAEHLSDECR 60

Query: 116 RRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR-------------- 161
           RRFYKNWCKSKKKAF++ ++++ +D+GK  I++   KM KYC VIR              
Sbjct: 61  RRFYKNWCKSKKKAFSRASQRWTSDEGKASIESDFAKMIKYCKVIRLIARTQIKLVPISQ 120

Query: 162 KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRW 221
           KKAHLMEIQ+NGGS+A K+++A    EK + ++ VF +DEMID+IGVT+GKG++GV +RW
Sbjct: 121 KKAHLMEIQINGGSIADKINYARERLEKHMHVNKVFGQDEMIDVIGVTRGKGFKGVTSRW 180

Query: 222 GVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES- 280
              +LPRKTH+GLRKVACIGAWHP+RV ++VARAGQ GYHHRTE+NKK+Y++G    +  
Sbjct: 181 HCKKLPRKTHKGLRKVACIGAWHPSRVQYSVARAGQKGYHHRTEVNKKVYRVGAGYHQEG 240

Query: 281 -----HSAMTEFDRSVYLLSSLMGSF 301
                ++A T FD +   ++  MG F
Sbjct: 241 NKVIKNNAATGFDLTDKSITP-MGGF 265


>gi|308160270|gb|EFO62765.1| Ribosomal protein L3 [Giardia lamblia P15]
          Length = 379

 Score =  315 bits (808), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 160/303 (52%), Positives = 205/303 (67%), Gaps = 19/303 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF   R G+LG+LPRKR +R RG+ KAFP D    P  LTAFLGYKAG TH++R +
Sbjct: 1   MSHRKFSCCRKGNLGYLPRKRCTRGRGRCKAFPPDVQGAPIHLTAFLGYKAGCTHVMRFI 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           +  GS LH ++  +  TII+ PP++   ++GY KTP+GLR++ TVWA H+ E   RRFY+
Sbjct: 61  DHRGSNLHNRQAIDQATIIDAPPMICTAIIGYAKTPKGLRAVTTVWAAHIAEPAMRRFYR 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           N+  ++K AF+ Y KK    DG   I+ QL ++K++  VIR              KKA +
Sbjct: 121 NYFHAEKTAFSTYMKK--AADGTY-IKEQLGRLKQHADVIRIVAHTQPALTPLKQKKADI 177

Query: 167 MEIQVNGGS-VAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           MEIQVNGG+ VA+KVD+AY   EK I I  VF     ID I +T+G+G+EGVVTRWGVTR
Sbjct: 178 MEIQVNGGANVAEKVDYAYALMEKPISIKDVFSVGAQIDTISITRGRGFEGVVTRWGVTR 237

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKT RG RKVACIGAWHPA V +TVARAGQ GY HRT+ NK+++ +  A +      T
Sbjct: 238 LPRKTRRGNRKVACIGAWHPANVQYTVARAGQMGYFHRTDTNKQVFMIDTA-ENPKCCTT 296

Query: 286 EFD 288
           EFD
Sbjct: 297 EFD 299


>gi|123495590|ref|XP_001326781.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121909700|gb|EAY14558.1| hypothetical protein TVAG_388910 [Trichomonas vaginalis G3]
          Length = 415

 Score =  315 bits (806), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 166/338 (49%), Positives = 219/338 (64%), Gaps = 42/338 (12%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PR GSLGFLPR R+   RG+V+++PKDD S+   L AF+GYKAGMTH++RDV
Sbjct: 1   MSHRKFNAPRRGSLGFLPRGRSHAVRGRVRSWPKDDASQKPHLCAFIGYKAGMTHVLRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
            +P S+LHKKE CE VTI+ETPP+ VVG++GY  T  GL+ + TVWA ++NEEV+R +YK
Sbjct: 61  VRPNSRLHKKEACEPVTILETPPMFVVGIIGYKPTVEGLKPVTTVWASYVNEEVKRNYYK 120

Query: 121 NWCKSK-KKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR------------------ 161
           NW +SK +KAF+  +     +  +K    QLE+++K  TVIR                  
Sbjct: 121 NWYQSKARKAFSCLSNGKAAEKREK----QLEELQKEATVIRVIAHTQSAKTTTRGVDAN 176

Query: 162 ---------------KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDII 206
                          KKAH++E Q+NGG VA K+++A    EK+I +  VF + E ID I
Sbjct: 177 EQGAKKVLKGNHLGQKKAHMIENQINGGDVAAKLNYAKSILEKEIKVADVFTEGEQIDTI 236

Query: 207 GVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEM 266
           GV KG G+EGV+ R+G  RL +KTHRG RKVACIG W+PARV ++VAR GQ G HHRTEM
Sbjct: 237 GVGKGFGWEGVIHRYGTKRLQKKTHRGRRKVACIGPWNPARVLWSVARYGQRGCHHRTEM 296

Query: 267 NKKIYKLGKASQE---SHSAMTEFDRSVYLLSSLMGSF 301
           NK+IY++G A  E   +    T FD +   ++  MG F
Sbjct: 297 NKRIYRIGAAEVEGKINEGGSTSFDLTKKSINP-MGGF 333


>gi|253747835|gb|EET02309.1| Ribosomal protein L3 [Giardia intestinalis ATCC 50581]
          Length = 379

 Score =  314 bits (805), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 159/303 (52%), Positives = 205/303 (67%), Gaps = 19/303 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF   R G+LG+LPRKR +R RG+ K FP D    P  LTAFLGYKAG TH++R +
Sbjct: 1   MSHRKFSCCRKGNLGYLPRKRCTRGRGRCKTFPPDVQGTPIHLTAFLGYKAGCTHVMRFI 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           +  GS LH ++  +  TII+ PP++   ++GY KTP+GLR++ TVWA H+ E   RRFY+
Sbjct: 61  DHRGSNLHNRQAIDQATIIDAPPMICTAIIGYAKTPKGLRAVTTVWAAHIAEPAMRRFYR 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           N+  + K AF+ Y KK    DG   I+ QL ++K++  VIR              KKA +
Sbjct: 121 NYFHANKTAFSTYMKK--AADGTY-IKEQLGRLKEHADVIRIVAHTQPALTPLKQKKADI 177

Query: 167 MEIQVNGG-SVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           MEIQVNGG SVA+KVD+AY   EK I I  VF+  + ID I +T+G+G+EGVVTRWGVTR
Sbjct: 178 MEIQVNGGKSVAEKVDYAYALMEKPISIKDVFEVGKQIDTISITRGRGFEGVVTRWGVTR 237

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKT RG RKVACIG+WHPA V +TVARAGQ GY HRT+ NK+++ +  A +      T
Sbjct: 238 LPRKTRRGNRKVACIGSWHPANVQYTVARAGQMGYFHRTDTNKQVFMIDTA-ENPRCCTT 296

Query: 286 EFD 288
           EFD
Sbjct: 297 EFD 299


>gi|426354157|ref|XP_004044534.1| PREDICTED: 60S ribosomal protein L3-like isoform 2 [Gorilla gorilla
           gorilla]
          Length = 351

 Score =  314 bits (804), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 149/238 (62%), Positives = 188/238 (78%), Gaps = 14/238 (5%)

Query: 53  MTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNE 112
           MTHI+R+V++P SK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  TV+A+H++ 
Sbjct: 1   MTHIMREVDRPASKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISN 60

Query: 113 EVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR----------- 161
           E +RRFYKNW KSKKKAFTKY KK++ +D KK ++     MKKYC VIR           
Sbjct: 61  ECKRRFYKNWHKSKKKAFTKYCKKWQDEDVKKQLEEDFSSMKKYCHVIRVIAHTQMRLLP 120

Query: 162 ---KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVV 218
              KKAHLMEIQVNGG+VA+K+D+     E+Q+ ++ VF +DEMID+IGVTKG GY+GV 
Sbjct: 121 LRQKKAHLMEIQVNGGTVAEKLDWVRERLEQQVNVNQVFGQDEMIDVIGVTKGNGYKGVT 180

Query: 219 TRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA 276
           +RW   +LP KTHRGLRKVACIGAWHPARV+F+VARAGQ G  HRTE+NKKIYK+G+ 
Sbjct: 181 SRWHTKKLPLKTHRGLRKVACIGAWHPARVAFSVARAGQKGNRHRTEINKKIYKIGQG 238


>gi|159109947|ref|XP_001705236.1| Ribosomal protein L3 [Giardia lamblia ATCC 50803]
 gi|157433317|gb|EDO77562.1| Ribosomal protein L3 [Giardia lamblia ATCC 50803]
          Length = 379

 Score =  313 bits (803), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 159/303 (52%), Positives = 204/303 (67%), Gaps = 19/303 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF   R G+LG+LPRKR +R RG+ K FP D    P  LTAFLGYKAG TH++R +
Sbjct: 1   MSHRKFSCCRKGNLGYLPRKRCTRGRGRCKTFPPDVQGAPIHLTAFLGYKAGCTHVMRFI 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           +  GS LH ++  +  TII+ PP++   ++GY KTP+GLR++ TVWA H+ E   RRFY+
Sbjct: 61  DHRGSNLHNRQAIDQATIIDAPPMICTAIIGYAKTPKGLRAVTTVWAAHIAEPAMRRFYR 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           N+  ++K AF+ Y KK    DG   I+ QL ++K++  VIR              KKA +
Sbjct: 121 NYFHAEKTAFSTYMKK--AADGTY-IKEQLGRLKQHADVIRIVAHTQPALTPLKQKKADI 177

Query: 167 MEIQVNGGS-VAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           MEIQVNGG+ VA+KVD+AY   EK I I  VF     ID I +T+G+G+EGVVTRWGVTR
Sbjct: 178 MEIQVNGGANVAEKVDYAYALMEKPISIKDVFSVGAQIDTISITRGRGFEGVVTRWGVTR 237

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKT RG RKVACIGAWHPA V +TVARAGQ GY HRT+ NK+++ +  A +      T
Sbjct: 238 LPRKTRRGNRKVACIGAWHPANVQYTVARAGQMGYFHRTDTNKQVFMIDTA-ENPRCCTT 296

Query: 286 EFD 288
           EFD
Sbjct: 297 EFD 299


>gi|188572498|gb|ACD65155.1| putative 60S ribosomal protein RPL3 [Phoronis muelleri]
          Length = 223

 Score =  313 bits (802), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 149/223 (66%), Positives = 179/223 (80%), Gaps = 14/223 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSL FLP+KR+ RHRGK KAFPKDD SKP  LTAFLGYKAGM+HIVRDV
Sbjct: 1   MSHRKFSAPRHGSLAFLPKKRSVRHRGKCKAFPKDDSSKPVHLTAFLGYKAGMSHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK +KKE  EAVTI+ETPP++ VGVVGY++TP+GLR+  TVWA+HL+EE RRRFYK
Sbjct: 61  DRPGSKANKKEVVEAVTIVETPPMIAVGVVGYIETPKGLRTFKTVWAEHLSEECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ DDGK+ I+  L KMKKYC V+R              KKAH+
Sbjct: 121 NWYKSKKKAFTKYGKKWKDDDGKQAIEKDLNKMKKYCKVVRVIAHTQMKLLKKRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVT 209
           MEIQ+NGG+VAQKVD+A    E+++P+ +VF  DEMID+IGVT
Sbjct: 181 MEIQLNGGTVAQKVDWAREHLEQKLPVKSVFAXDEMIDVIGVT 223


>gi|324523353|gb|ADY48234.1| 60S ribosomal protein L3, partial [Ascaris suum]
          Length = 264

 Score =  309 bits (792), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 149/235 (63%), Positives = 184/235 (78%), Gaps = 15/235 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+GF P+KR+ RHRGKVKAFPKDDP+KP  LTAF+G+KAGMTHIVR+V
Sbjct: 4   MSHRKFSAPRHGSMGFTPKKRSRRHRGKVKAFPKDDPTKPIHLTAFIGFKAGMTHIVREV 63

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           +KPGSK++KKE  EAVTI+ETPP+V+VG+VGY+ TPRG R   TVWA+HL+E+ RRRFYK
Sbjct: 64  DKPGSKVNKKEVVEAVTILETPPMVIVGIVGYIDTPRGPRQFKTVWAEHLSEDCRRRFYK 123

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW  SKKKAF K+ KK++ +DG+K I++ L KMKKYC+ IR              KKAH+
Sbjct: 124 NWHTSKKKAFQKHAKKWQDEDGRKSIESDLNKMKKYCSKIRVIAHTQMKVMKHREKKAHI 183

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRW 221
           MEIQVNGG+V +KVD+A    EKQ+ +D+VF +DEMID IGVTKG  Y G   +W
Sbjct: 184 MEIQVNGGTVPEKVDWAKEHLEKQVAVDSVFAQDEMIDCIGVTKGT-YHGDPGQW 237


>gi|284073162|gb|ADB77820.1| 60S ribosomal protein L3 [Mesostigma viride]
          Length = 225

 Score =  309 bits (791), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 153/228 (67%), Positives = 180/228 (78%), Gaps = 18/228 (7%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           KFEH R GSLGFLP+KRA R RGKVK+FPKDD ++   LTAF+G+KAGMTHI+R+V+KPG
Sbjct: 1   KFEHARCGSLGFLPKKRAKRMRGKVKSFPKDDRTQKPHLTAFMGFKAGMTHILREVDKPG 60

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
           SKLHKKETCEAVTIIE P +VVVGV GY KT  GL+++ TVWA+HLN+EV+RRFYKNW K
Sbjct: 61  SKLHKKETCEAVTIIEVPAMVVVGVTGYAKTTGGLKTIGTVWAKHLNDEVKRRFYKNWYK 120

Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAHLMEI 169
           SKKKAFTKY KK E D   K++Q  LE++KKY +VIR               KKAHLMEI
Sbjct: 121 SKKKAFTKYAKKVEND---KELQESLERLKKYSSVIRILAHTQVRKVPNLKQKKAHLMEI 177

Query: 170 QVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGV 217
           QVNGG V  KVDFAY  FEK + +DA+F ++EMIDIIGVTKGKGY+GV
Sbjct: 178 QVNGGEVPAKVDFAYDLFEKAVNVDAIFAQNEMIDIIGVTKGKGYQGV 225


>gi|284073164|gb|ADB77821.1| 60S ribosomal protein L3 [Ostreococcus tauri]
          Length = 230

 Score =  305 bits (781), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 158/234 (67%), Positives = 186/234 (79%), Gaps = 19/234 (8%)

Query: 7   EHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSK 66
           EH R+G+LGFLP+KR+ R RGKVK+FPKDD SKP  LTAF+G+KAGMTH+VRDVEKPGSK
Sbjct: 1   EHARYGNLGFLPKKRSQRSRGKVKSFPKDDASKPPHLTAFMGFKAGMTHVVRDVEKPGSK 60

Query: 67  LHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSK 126
           +HKKE C+AVTIIE P LVVVG+VGYV+TP+GLR   TVWA+HLN+E+RRRFYKNW KSK
Sbjct: 61  MHKKEQCDAVTIIECPELVVVGLVGYVRTPKGLRGKKTVWAEHLNDEIRRRFYKNWFKSK 120

Query: 127 KKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAHLMEIQV 171
           KKAFTKY K Y     +KD    LE++KK C VIR               KKAH+MEIQV
Sbjct: 121 KKAFTKYAKNYTNGSIEKD----LEELKKSCDVIRVIAHTQVRKVKGLKQKKAHIMEIQV 176

Query: 172 NGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           NGG  A KVDF +  FEK +P+D+VFQ+DEMID+IGVTKGKG++GVVTRWGVTR
Sbjct: 177 NGGDAAAKVDFGFALFEKTVPVDSVFQQDEMIDLIGVTKGKGFQGVVTRWGVTR 230


>gi|429962137|gb|ELA41681.1| hypothetical protein VICG_01314 [Vittaforma corneae ATCC 50505]
          Length = 383

 Score =  303 bits (777), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 159/316 (50%), Positives = 210/316 (66%), Gaps = 28/316 (8%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MS RKF  PRHGSL F P++RAS  R  +KAFP+DD ++PC LTAFL YKAGMTH++R  
Sbjct: 1   MSCRKFRAPRHGSLQFRPKRRASSIRPSIKAFPRDDSTQPCHLTAFLSYKAGMTHVIRSK 60

Query: 61  E-KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEV-RRRF 118
           E K  +K   KE  EAVTI+ETPP+V+ GVVGY +T  GL+    V A+H++E V RR F
Sbjct: 61  EVKSKTKSQTKELLEAVTILETPPMVIHGVVGYQRTIGGLKRTKVVLAEHMSEGVIRRMF 120

Query: 119 YKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KK 163
            K +    K    + T  +  DD        +E++KK   VIR               KK
Sbjct: 121 TKRFVPGMKYTDLRKTVGFSQDD--------IEELKKTSDVIRVLAHSQVYKIRPIHQKK 172

Query: 164 AHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 223
           AH+ EIQVNGGS+++KVDFA    E++IPI  VF ++E+ID IGVTKGKG++GV+ RWGV
Sbjct: 173 AHIAEIQVNGGSISEKVDFAIERLEREIPISEVFSENELIDTIGVTKGKGFQGVIKRWGV 232

Query: 224 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSA 283
             LPRKT++G+RKVACIGAWHP+RV ++VARAGQ G+H RT+MN  +Y +G  +      
Sbjct: 233 RILPRKTNKGIRKVACIGAWHPSRVMYSVARAGQLGFHRRTQMNLAVYAIGNGND---PV 289

Query: 284 MTEFDRSVYLLSSLMG 299
           +T+FD +V  ++ L G
Sbjct: 290 VTDFDLTVKTINPLGG 305


>gi|378756821|gb|EHY66845.1| ribosomal protein L3 [Nematocida sp. 1 ERTm2]
          Length = 394

 Score =  303 bits (775), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 161/317 (50%), Positives = 218/317 (68%), Gaps = 21/317 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSL FLPRKRA R R ++ ++P+DD ++   LT +  YKAGMTH++R  
Sbjct: 1   MSHRKYEAPRHGSLAFLPRKRAERIRPRIPSYPQDDATQKVHLTTYFAYKAGMTHVLRVG 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           E+ GSKL+KKE  + VTI+ETP  VV GVVGY KTPRGL ++ TV A+H++E V+RR+YK
Sbjct: 61  EREGSKLNKKEIIDPVTILETPKCVVFGVVGYKKTPRGLVNVKTVLAEHIDESVKRRYYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAH 165
            + +SKK A + Y  KY+    +++IQA    ++    VIR               KKAH
Sbjct: 121 RYYRSKKTALSNYPLKYKNGVIEQEIQA----IRDNADVIRVLIHSQAPKIKILNTKKAH 176

Query: 166 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           +ME Q+NGG++ +K+DFA   FEK+I     F ++EMIDIIGVTKGKG+E    RWG T 
Sbjct: 177 IMESQLNGGTIQEKIDFALAHFEKEISSQDCFSREEMIDIIGVTKGKGFESCTKRWGTTI 236

Query: 226 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           LPRKT++GLRKVACIGAWHP+RV ++V RAGQ G+HHR   NK++Y +G   Q + +  T
Sbjct: 237 LPRKTNKGLRKVACIGAWHPSRVMYSVPRAGQTGFHHRVMQNKRVYLMGDG-QSTDACKT 295

Query: 286 EFDRSVYLLSSLMGSFS 302
           E+D +   ++  MG F+
Sbjct: 296 EYDLTEKTINP-MGGFT 311


>gi|387594270|gb|EIJ89294.1| 60s ribosomal protein l3 [Nematocida parisii ERTm3]
 gi|387595016|gb|EIJ92643.1| 60s ribosomal protein l3 [Nematocida parisii ERTm1]
          Length = 393

 Score =  301 bits (771), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 162/316 (51%), Positives = 217/316 (68%), Gaps = 19/316 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRK+E PRHGSL FLPRKRA R R ++ ++P+DD ++   LT +  YKAGMTH++R  
Sbjct: 1   MSHRKYEAPRHGSLAFLPRKRAERIRPRIPSYPQDDETQKVHLTTYFAYKAGMTHVLRVG 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           E+ GSKL+K+E  + VTI+ETP  VV G+VGY KTPRGL ++ TV A+H++E V+RR+YK
Sbjct: 61  EREGSKLNKREIIDPVTILETPKCVVFGLVGYKKTPRGLVNVKTVLAEHIDESVKRRYYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQA--------------QLEKMKKYCTVIRKKAHL 166
            + +SKK A + Y  KY+    +++IQA              Q  K+K   T   KKAH+
Sbjct: 121 RYYRSKKTALSNYPLKYKNGVIEQEIQAIRDNADVIRVLIHSQAPKIKALNT---KKAHI 177

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           ME Q+NGGS+  K+DFA   FEK+I     F K+EMIDIIGVTKGKG++    RWG T L
Sbjct: 178 MESQLNGGSIQDKIDFALSNFEKEISAPDCFSKEEMIDIIGVTKGKGFQSCTKRWGTTIL 237

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRKT++GLRKVACIGAWHP+RV ++V RAGQ G+HHR   NK++Y +G   Q + S  TE
Sbjct: 238 PRKTNKGLRKVACIGAWHPSRVMYSVPRAGQTGFHHRVMQNKRVYLVGDG-QSTDSCKTE 296

Query: 287 FDRSVYLLSSLMGSFS 302
           +D +   ++  MG F+
Sbjct: 297 YDLTEKTINP-MGGFA 311


>gi|42565416|gb|AAS20981.1| ribosomal protein L3 [Hyacinthus orientalis]
          Length = 263

 Score =  300 bits (768), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 145/188 (77%), Positives = 161/188 (85%), Gaps = 16/188 (8%)

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAHLMEIQVNG 173
           AFTKY+ KYE+DDGKK+IQ QL+KMKKY TVIR               KKAHLMEIQVNG
Sbjct: 4   AFTKYSNKYESDDGKKEIQTQLDKMKKYATVIRVLAHTQLRKMKGLKQKKAHLMEIQVNG 63

Query: 174 GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 233
           G++A+KVD+AYGFFEKQIP+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG
Sbjct: 64  GTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 123

Query: 234 LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRSVYL 293
           LRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKIY+LGK+  ESH A+TEFDR+   
Sbjct: 124 LRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKIYRLGKSGDESHQAVTEFDRTEKD 183

Query: 294 LSSLMGSF 301
           ++  MG F
Sbjct: 184 ITP-MGGF 190


>gi|145497857|ref|XP_001434917.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124402045|emb|CAK67520.1| unnamed protein product [Paramecium tetraurelia]
          Length = 341

 Score =  292 bits (748), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 140/261 (53%), Positives = 188/261 (72%), Gaps = 18/261 (6%)

Query: 53  MTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNE 112
           MTHI+R VE+PGSKL+ KE  EAVTI+ETPPL VVG+VGY++TPRGLR+L TVW+  + +
Sbjct: 1   MTHILRTVERPGSKLNGKEVVEAVTIVETPPLAVVGIVGYIETPRGLRALTTVWSTKIAK 60

Query: 113 EVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR----------- 161
           +  RRFYKNW  SKKKAFT Y K    +   K+++ QL+++ KYC V+R           
Sbjct: 61  DTLRRFYKNWINSKKKAFTNYNK---ANAEPKNLETQLKRIVKYCQVVRVIVHTQMSKLN 117

Query: 162 ---KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVV 218
              KK H+ E+QVNGG+  QKV++A G  EK++ +D VF+++E ID++GVTKGKG  GV+
Sbjct: 118 LRQKKNHVFEVQVNGGTTEQKVNYAKGLLEKEVKVDQVFKQNEQIDVLGVTKGKGVAGVI 177

Query: 219 TRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ 278
            R+GV  L +KTHRG R+V CIG WHPA V ++VAR GQ GYHHRTEMNKKIY++G A+ 
Sbjct: 178 KRFGVKHLQKKTHRGWRRVGCIGGWHPANVRYSVARTGQLGYHHRTEMNKKIYRIG-AAG 236

Query: 279 ESHSAMTEFDRSVYLLSSLMG 299
           + ++A TE D +   ++ L G
Sbjct: 237 DKNTASTEADLTSKAITPLGG 257


>gi|167377647|ref|XP_001734483.1| 60S ribosomal protein L3 [Entamoeba dispar SAW760]
 gi|165904006|gb|EDR29379.1| 60S ribosomal protein L3, putative [Entamoeba dispar SAW760]
          Length = 381

 Score =  290 bits (742), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 146/280 (52%), Positives = 190/280 (67%), Gaps = 16/280 (5%)

Query: 23  SRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETP 82
           S  +  V AFPKD+ ++   LT FLG+KAGMTH++R+V++  +KL K    E VTIIETP
Sbjct: 2   SHRKATVSAFPKDNAAEKPHLTGFLGFKAGMTHVIREVKRTNTKLPKDGVLEPVTIIETP 61

Query: 83  PLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDG 142
           P+VV G VGY KT  GL+ +  V+A+H+ +E +RR+ K W K+ K  F  +T+KY     
Sbjct: 62  PMVVAGFVGYKKTTTGLKPITAVFAEHIADEFKRRYTKKWYKNTKNQFAVHTEKYNDVKA 121

Query: 143 KKDIQAQLEKMKKYCTVIR--------------KKAHLMEIQVNGGSVAQKVDFAYGFFE 188
           K   + Q+  +K  C V+R              KKA +MEIQ+NGGS+A+KVDFA    E
Sbjct: 122 KSKRERQIRLIKNRCDVVRVIAHTQMALVPLKQKKAEVMEIQINGGSIAEKVDFAVSLLE 181

Query: 189 KQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARV 248
           KQI +++VF  DE ID+  VTKG GY GV+ R+GV  LPRKTHRGLRKVAC+GAWHPARV
Sbjct: 182 KQISVNSVFGTDECIDVCSVTKGHGYNGVIKRFGVRHLPRKTHRGLRKVACVGAWHPARV 241

Query: 249 SFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFD 288
           S+TVARAGQ G+  RTE+NKKIY+LG    +  +A TEFD
Sbjct: 242 SWTVARAGQMGFFKRTEVNKKIYRLG--CGDLKNAKTEFD 279


>gi|226480250|emb|CAX78789.1| ribosomal protein L3 [Schistosoma japonicum]
          Length = 228

 Score =  290 bits (742), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 141/226 (62%), Positives = 172/226 (76%), Gaps = 14/226 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGF P+KR  R RGK KAFP+D  S P  LTAF+GYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFTPKKRCRRIRGKCKAFPRDRRSLPPHLTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  E VTI+E PP+V+VG+VGY  T +GLR+  TVWA+HL EE RRRFYK
Sbjct: 61  DRPGSKVHKREVVEPVTIMECPPMVIVGMVGYAPTAKGLRTFKTVWAEHLTEECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           +WCKSKKKAFTK ++K+  + G   I   L+K+KKYCTV+R              KKAH+
Sbjct: 121 DWCKSKKKAFTKASRKWADEAGLALINRDLKKIKKYCTVVRAIAHTQMRLMKHRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGK 212
           MEIQVNGG+++QKVD+    FEKQIP+  VF +DEMID+IGVTKGK
Sbjct: 181 MEIQVNGGTISQKVDWIRQHFEKQIPVSNVFSQDEMIDVIGVTKGK 226


>gi|124783060|gb|ABN14901.1| ribosomal protein L3, partial [Taenia asiatica]
          Length = 224

 Score =  289 bits (739), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 140/224 (62%), Positives = 173/224 (77%), Gaps = 14/224 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGF P+KR+ R RGK KAFPKD  S P  LTAF+G+KAGMTH+VRDV
Sbjct: 1   MSHRKFSAPRHGSLGFTPKKRSRRIRGKCKAFPKDRRSLPPHLTAFMGFKAGMTHVVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HKKE  E VTI+E PP+V+VG+VGY+ T RGLR+  T+WA+HL+EE RRRFYK
Sbjct: 61  DRPGSKVHKKEIIEPVTILECPPMVIVGIVGYIPTARGLRTFKTIWAEHLSEECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           ++CKSK+KAFTK +KK+  + G   I   ++KMKKYC+VIR              KKAH+
Sbjct: 121 DFCKSKRKAFTKASKKWADEAGLAAINNDIKKMKKYCSVIRVIAHTQMRLMKHRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 210
           MEIQVNGG+VAQKVD+A    EKQ+P+  VF +DEMID+IGVTK
Sbjct: 181 MEIQVNGGTVAQKVDWAREHLEKQVPVANVFAQDEMIDVIGVTK 224


>gi|310771890|emb|CBH28886.1| 60S RIBOSOMAL PROTEIN L3 [Anncaliia algerae]
          Length = 381

 Score =  285 bits (729), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 154/314 (49%), Positives = 202/314 (64%), Gaps = 20/314 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MS RKFE PRHGSL F P+KRA   +  +K+F KDDP  P  LT F  YKAGMTHIVR+ 
Sbjct: 1   MSCRKFEAPRHGSLAFCPKKRAKSVKQSIKSFEKDDPQSPIHLTGFYVYKAGMTHIVRNK 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
                K   KE  EAVT++E PP+VV G+ GYV T  GL+   T+ + H+N+ V RRF K
Sbjct: 61  IMKDKKSTVKEILEAVTVLEAPPMVVFGIQGYVNTSEGLKLKTTLISSHVNQSVIRRFLK 120

Query: 121 NWCKSKKK---AFTKYTKKYETDDG----------KKDIQAQLEKMKKYCTVIRKKAHLM 167
           N+  S +K   + TK   K ETD+           +  +  Q++++K+  T   KKAH+ 
Sbjct: 121 NFYTSSRKDMGSITKAITKEETDEKIAILKECDSIRVMMHTQIDRIKQIKT---KKAHIS 177

Query: 168 EIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 227
           EIQVNGGSVA KV++A    EK++ +  VF ++++ID+IGVTKGKG+ GV  R+G   LP
Sbjct: 178 EIQVNGGSVADKVEWAVSMLEKEVKVTDVFGENDLIDVIGVTKGKGFNGVTKRFGTKILP 237

Query: 228 RKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEF 287
           RKT++G RKVACIGAWHPA V ++V RAGQ G+H RTE NK +YKLG   Q   S  TE+
Sbjct: 238 RKTNKGKRKVACIGAWHPANVLYSVPRAGQLGFHRRTEYNKMVYKLGNGKQ---SIKTEY 294

Query: 288 DRSVYLLSSLMGSF 301
           D +   ++  MG F
Sbjct: 295 DLTEKTVNP-MGGF 307


>gi|56541782|emb|CAI30273.1| hypothetical protein [Pongo abelii]
          Length = 202

 Score =  285 bits (729), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 137/197 (69%), Positives = 164/197 (83%), Gaps = 14/197 (7%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  TV+A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KK++ +DGKK ++     MKKYC VIR              KKAHL
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180

Query: 167 MEIQVNGGSVAQKVDFA 183
           MEIQVNGG+VA+K+D+A
Sbjct: 181 MEIQVNGGTVAEKLDWA 197


>gi|255098787|gb|ACU00734.1| 60S ribosomal protein L3 [Nosema bombycis]
 gi|326573816|gb|ADZ95674.1| 60S ribosomal protein L3 [Nosema bombycis]
          Length = 384

 Score =  285 bits (728), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 154/316 (48%), Positives = 207/316 (65%), Gaps = 29/316 (9%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD- 59
           MS RKF  PRHGSL F PRKR+   +  ++AFPKD   +   LTAF+GYKAGMTH+VR  
Sbjct: 1   MSCRKFNAPRHGSLAFGPRKRSKTIKPSIRAFPKDVQEEKIHLTAFIGYKAGMTHVVRSK 60

Query: 60  VEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRR-F 118
           + +  +K   KE  +AVT+IETPP+V+ GV GY  T +GL  + TV A H++E VRRR F
Sbjct: 61  IIQTKNKQLSKEIMDAVTLIETPPMVIYGVTGYEVTGKGLNRIATVLAPHIDESVRRREF 120

Query: 119 YKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KK 163
            K W     +  +   K+Y  +  +KD    LE+++K  +VIR               KK
Sbjct: 121 GKRW-----EQLSANIKEYNKEKAEKD----LEEIRKRASVIRILAHTQPTKIPALHLKK 171

Query: 164 AHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 223
           +H+ EIQVNGG++ +KVD+A   FEK++ ID VF+ +E +D IGVTKGKG++GVV R+GV
Sbjct: 172 SHISEIQVNGGTINEKVDWALDKFEKEVTIDEVFEVNENLDTIGVTKGKGFQGVVKRFGV 231

Query: 224 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSA 283
           T  PRK+ +G+RKVACIGAWHP+RV  TVARAGQ G+H RTE NKK+Y +G  ++     
Sbjct: 232 TIQPRKSRKGIRKVACIGAWHPSRVMTTVARAGQMGFHRRTETNKKVYMIGNGNE---LI 288

Query: 284 MTEFDRSVYLLSSLMG 299
            TEFD +   ++ L G
Sbjct: 289 KTEFDLTEKPITPLGG 304


>gi|284073160|gb|ADB77819.1| 60S ribosomal protein L3 [Klebsormidium flaccidum]
          Length = 204

 Score =  284 bits (727), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 139/204 (68%), Positives = 166/204 (81%), Gaps = 16/204 (7%)

Query: 6   FEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGS 65
           FEH RHGSLGFLP+KRA R RGKVK++ KDDPSK  +L AFLGYKAGMTHI+RDV+KPGS
Sbjct: 1   FEHARHGSLGFLPKKRAKRIRGKVKSWAKDDPSKAPQLQAFLGYKAGMTHIMRDVDKPGS 60

Query: 66  KLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKS 125
           KLHKKETCEAVTI+ETPP+V+VGVVGY+KTPRGLRSL TVWAQHL+E V+RRFYK + +S
Sbjct: 61  KLHKKETCEAVTIVETPPMVIVGVVGYIKTPRGLRSLATVWAQHLDESVKRRFYKRFGQS 120

Query: 126 KKKAFTKYTK-KYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAHLMEI 169
           KKKAFTKY K KY   +GKK + + LE++KKYC+V+R               KKAHLME+
Sbjct: 121 KKKAFTKYVKSKYGDGEGKKGVDSDLERIKKYCSVVRVLAHTQVKLIKGIGQKKAHLMEV 180

Query: 170 QVNGGSVAQKVDFAYGFFEKQIPI 193
           Q+NGGSVA KVDFA  +FEK++ +
Sbjct: 181 QINGGSVADKVDFAVKYFEKKVGV 204


>gi|414587237|tpg|DAA37808.1| TPA: hypothetical protein ZEAMMB73_880497, partial [Zea mays]
          Length = 162

 Score =  284 bits (727), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 132/151 (87%), Positives = 142/151 (94%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKR+SRHRGKVK+FP+DDP KPC LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPRDDPKKPCHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVTIIETPPLV+VG+V YVKTPRGLR+L +VWAQHL+EEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLE 151
           NWCKSKKKAFTKY  KYE D GKK+IQ QLE
Sbjct: 121 NWCKSKKKAFTKYALKYENDAGKKEIQLQLE 151


>gi|344248331|gb|EGW04435.1| 60S ribosomal protein L3-like [Cricetulus griseus]
          Length = 363

 Score =  283 bits (723), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 146/253 (57%), Positives = 186/253 (73%), Gaps = 14/253 (5%)

Query: 53  MTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNE 112
           MTH +R+V +PG K+ K+E  EAVTI+ETPPLVVVGVVGYV TPRGLRS  T++A+HL++
Sbjct: 1   MTHTLREVHRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSD 60

Query: 113 EVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR----------- 161
           E RRRFY++W KSKKKAFTK  K++    GKK +Q     MKKYC VIR           
Sbjct: 61  ECRRRFYRDWHKSKKKAFTKACKRWRDPSGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLP 120

Query: 162 ---KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVV 218
              KKAH+MEIQ+NGG+VA+KV +A    EKQ+P+ +VF + E+ID+I VTKG+G +GV 
Sbjct: 121 FRQKKAHIMEIQLNGGTVAEKVAWAQAQLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVT 180

Query: 219 TRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ 278
           +RW   +LPRKTH+GLRKVACIGAWHPARV  ++ARAGQ GYHHRTE+NKKIY++G+   
Sbjct: 181 SRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLH 240

Query: 279 ESHSAMTEFDRSV 291
                M + + S 
Sbjct: 241 MEDGKMVKNNAST 253


>gi|217069808|gb|ACJ83264.1| unknown [Medicago truncatula]
          Length = 177

 Score =  282 bits (722), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 142/173 (82%), Positives = 160/173 (92%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDP+KP +LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPTKPPKLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCE VTIIETPP+VVVGVVGYVKTPRGLR+L TVW QHL+EE++RRFYK
Sbjct: 61  EKPGSKLHKKETCEPVTIIETPPMVVVGVVGYVKTPRGLRTLNTVWTQHLSEEIKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNG 173
           NWCKSKKKAF+KY+K+YE+D+GKK+IQ QLEK+KKY TVIR  AH    ++ G
Sbjct: 121 NWCKSKKKAFSKYSKQYESDEGKKNIQTQLEKLKKYATVIRVLAHTQIRKMKG 173


>gi|358443180|gb|AEU11836.1| control protein HCTL036 [Eueides isabella]
          Length = 217

 Score =  282 bits (721), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 135/217 (62%), Positives = 170/217 (78%), Gaps = 14/217 (6%)

Query: 27  GKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVV 86
           GKVKAFPKDDPSKP  LTAF+GYKAGMTH+VR+ ++PGSK++KKE  EAVT+IETPP+V 
Sbjct: 1   GKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIVEAVTVIETPPMVC 60

Query: 87  VGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDI 146
           VGVVGY++TP GLR+L TVWA+H++E+ RRRFYKNW K KKKAFTK +KK++ + G+K I
Sbjct: 61  VGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYKCKKKAFTKSSKKWQDELGRKSI 120

Query: 147 QAQLEKMKKYCTVIR--------------KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIP 192
           +   +KM +YC+VIR              KKAH+MEIQVNGG++  KV +A    EK IP
Sbjct: 121 EKDFKKMIRYCSVIRVIAHTQMKLLKQRQKKAHIMEIQVNGGNIEDKVKWAREHLEKPIP 180

Query: 193 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 229
           +D+VF +DEMID IGVTKGKGY+GV +RW   +LPRK
Sbjct: 181 VDSVFTQDEMIDCIGVTKGKGYKGVTSRWHTKKLPRK 217


>gi|358443186|gb|AEU11839.1| control protein HCTL036 [Heliconius aoede]
          Length = 217

 Score =  281 bits (718), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 135/217 (62%), Positives = 170/217 (78%), Gaps = 14/217 (6%)

Query: 27  GKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVV 86
           GKVKAFPKDD SKP  LTAF+GYKAGMTH+VR+ ++PGSK++KKE  EAVT+IETPP+V 
Sbjct: 1   GKVKAFPKDDSSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIVEAVTVIETPPMVC 60

Query: 87  VGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDI 146
           VGVVGY++TP GLR+L TVWA+H++E+ RRRFYKNW KSKKKAFTK +KK++ + G+K I
Sbjct: 61  VGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYKSKKKAFTKSSKKWQDELGRKSI 120

Query: 147 QAQLEKMKKYCTVIR--------------KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIP 192
           +   +KM +YC+VIR              KKAH+MEIQVNGG++  KV +A    EK IP
Sbjct: 121 EKDFKKMIRYCSVIRVIAHTQMKLLKQRQKKAHIMEIQVNGGNIEDKVKWAREHLEKPIP 180

Query: 193 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 229
           +D+VF +DEMID IGVTKGKGY+GV +RW   +LPRK
Sbjct: 181 VDSVFTQDEMIDCIGVTKGKGYKGVTSRWHTKKLPRK 217


>gi|296219367|ref|XP_002755828.1| PREDICTED: 60S ribosomal protein L3-like [Callithrix jacchus]
          Length = 424

 Score =  280 bits (716), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 150/310 (48%), Positives = 195/310 (62%), Gaps = 31/310 (10%)

Query: 2   SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
           SHRKF  PRHG LGFLP KR+ RHRGKVK +P+DDPS+P  LTAFLGYKAGMTH +R+V 
Sbjct: 46  SHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREVH 105

Query: 62  KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
           +PG          A T     P   +     +     L         H+ EE      + 
Sbjct: 106 RPG--------LSAWTAGLASPFSEL-----LHLCHSLSGPGDSEGAHITEE------ET 146

Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR------KKAHLMEIQVNGGS 175
             KSKKKAFTK  K++   DGKK +Q     MK +   ++      KKAH+MEIQ+NGG+
Sbjct: 147 GHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKNHVLQMKLLPFRQKKAHIMEIQLNGGT 206

Query: 176 VAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLR 235
           VA+KV +A    EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW   +LPRKTH+GLR
Sbjct: 207 VAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLPRKTHKGLR 266

Query: 236 KVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------HSAMTEFDR 289
           KVACIGAWHPARV  ++ARAGQ GYHHRTE+NKKIY++G+           ++A T +D 
Sbjct: 267 KVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHMEDGKLVKNNASTSYDV 326

Query: 290 SVYLLSSLMG 299
           +   ++ L G
Sbjct: 327 TAKSITPLGG 336


>gi|327287585|ref|XP_003228509.1| PREDICTED: 60S ribosomal protein L3-like [Anolis carolinensis]
          Length = 399

 Score =  280 bits (715), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 146/256 (57%), Positives = 188/256 (73%), Gaps = 21/256 (8%)

Query: 66  KLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKS 125
           ++ K+E  EAVTIIETPPLVVVGVVGY++TPRGLRS  T++A+H+++E RRRFYKNW KS
Sbjct: 58  EVSKREEVEAVTIIETPPLVVVGVVGYIETPRGLRSFRTIFAEHISDECRRRFYKNWHKS 117

Query: 126 KKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLMEIQV 171
           KKKAFTK+ KK++ + GKK ++     MKKYC VIR              KKAH+MEIQ+
Sbjct: 118 KKKAFTKFCKKWQDETGKKQLEKDFAAMKKYCKVIRVIVHTQMKLLPMRQKKAHVMEIQL 177

Query: 172 NGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 231
           NGG+VA+KVD+A+   EKQI + +VF + EMID+IGVTKG G +GV +RW   +LPRKTH
Sbjct: 178 NGGTVAEKVDWAHEKMEKQISVQSVFSQSEMIDVIGVTKGHGMKGVTSRWHTKKLPRKTH 237

Query: 232 RGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAM------T 285
           +GLRKVACIGAWHPARV +++ARAGQ GYHHRTE+NKKIY++G+        M      T
Sbjct: 238 KGLRKVACIGAWHPARVGYSIARAGQKGYHHRTELNKKIYRIGRGVHVEDGKMVRNNGST 297

Query: 286 EFDRSVYLLSSLMGSF 301
            +D +   ++  MG F
Sbjct: 298 NYDTTEKTITP-MGGF 312


>gi|222424540|dbj|BAH20225.1| AT1G61580 [Arabidopsis thaliana]
          Length = 257

 Score =  279 bits (714), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 133/183 (72%), Positives = 155/183 (84%), Gaps = 16/183 (8%)

Query: 134 TKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAHLMEIQVNGGSVAQ 178
           +KK+ET++GKKDIQ+QLEKMKKYC+VIR               KKAHL EIQ+NGG +A+
Sbjct: 1   SKKHETEEGKKDIQSQLEKMKKYCSVIRVLAHTQIRKMKGLKQKKAHLNEIQINGGDIAK 60

Query: 179 KVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA 238
           KVD+A   FEKQ+P+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA
Sbjct: 61  KVDYACSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA 120

Query: 239 CIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRSVYLLSSLM 298
           CIGAWHPARVS+TVARAGQNGYHHRTEMNKK+Y++GK  QE+HSAMTE+DR+   ++  M
Sbjct: 121 CIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMTEYDRTEKDITP-M 179

Query: 299 GSF 301
           G F
Sbjct: 180 GGF 182


>gi|358443188|gb|AEU11840.1| control protein HCTL036 [Heliconius burneyi]
 gi|358443190|gb|AEU11841.1| control protein HCTL036 [Heliconius doris]
 gi|358443192|gb|AEU11842.1| control protein HCTL036 [Heliconius xanthocles]
 gi|358443196|gb|AEU11844.1| control protein HCTL036 [Heliconius hortense]
 gi|358443198|gb|AEU11845.1| control protein HCTL036 [Heliconius hewitsoni]
 gi|358443202|gb|AEU11847.1| control protein HCTL036 [Heliconius sara]
 gi|358443204|gb|AEU11848.1| control protein HCTL036 [Heliconius demeter]
 gi|358443206|gb|AEU11849.1| control protein HCTL036 [Heliconius charithonia]
          Length = 217

 Score =  279 bits (713), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 134/217 (61%), Positives = 169/217 (77%), Gaps = 14/217 (6%)

Query: 27  GKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVV 86
           GKVKAFPKDD SKP  LTAF+GYKAGMTH+VR+ ++PGSK++KKE  EAVT+IETPP+V 
Sbjct: 1   GKVKAFPKDDSSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIVEAVTVIETPPMVC 60

Query: 87  VGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDI 146
           VGVVGY++TP GLR+L TVWA+H++E+ RRRFYKNW K KKKAFTK +KK++ + G+K I
Sbjct: 61  VGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYKCKKKAFTKSSKKWQDELGRKSI 120

Query: 147 QAQLEKMKKYCTVIR--------------KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIP 192
           +   +KM +YC+VIR              KKAH+MEIQVNGG++  KV +A    EK IP
Sbjct: 121 EKDFKKMIRYCSVIRVIAHTQMKLLKQRQKKAHIMEIQVNGGNIEDKVKWAREHLEKPIP 180

Query: 193 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 229
           +D+VF +DEMID IGVTKGKGY+GV +RW   +LPRK
Sbjct: 181 VDSVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKLPRK 217


>gi|226475912|emb|CAX72046.1| ribosomal protein L3 [Schistosoma japonicum]
          Length = 341

 Score =  279 bits (713), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 136/243 (55%), Positives = 175/243 (72%), Gaps = 18/243 (7%)

Query: 79  IETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYE 138
           +E PP+V+VG+VGY  T +GLR+  TVWA+HL EE RRRFYK+WCKSKKKAFTK ++K+ 
Sbjct: 1   MECPPMVIVGMVGYAPTAKGLRTFKTVWAEHLTEECRRRFYKDWCKSKKKAFTKASRKWA 60

Query: 139 TDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLMEIQVNGGSVAQKVDFAY 184
            + G   I   L+K+KKYCTV+R              KKAH+MEIQVNGG+++QKVD+  
Sbjct: 61  DEAGLALINRDLKKIKKYCTVVRAIAHTQMRLMKHRQKKAHIMEIQVNGGTISQKVDWIR 120

Query: 185 GFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWH 244
             FEKQIP+  VF +DEMID+IGVTKGKG++GV +RW   +LPRKTH+GLRKVACIGAWH
Sbjct: 121 QHFEKQIPVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWH 180

Query: 245 PARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE----SHSAMTEFDRSVYLLSSLMGS 300
           PARV+ +V RAGQ GY HRTE+NKKIY++G   Q     + +   + DR   +L    G+
Sbjct: 181 PARVARSVTRAGQKGYFHRTELNKKIYRIGMGLQAQLEVAKAEAAKDDRDKNVLPKPKGN 240

Query: 301 FSS 303
            S+
Sbjct: 241 AST 243


>gi|358443184|gb|AEU11838.1| control protein HCTL036 [Heliconius hecale]
          Length = 217

 Score =  278 bits (711), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 133/217 (61%), Positives = 169/217 (77%), Gaps = 14/217 (6%)

Query: 27  GKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVV 86
           GKVKAFPKDD SKP  LTAF+GYKAGMTH+VR+ ++PGSK++KKE  EAVT+IETPP+V 
Sbjct: 1   GKVKAFPKDDSSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIVEAVTVIETPPMVC 60

Query: 87  VGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDI 146
           VGVVGY++TP GLR+L TVWA+H++E+ RRRFYKNW K KKKAFTK +KK++ + G+K I
Sbjct: 61  VGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYKCKKKAFTKSSKKWQDELGRKSI 120

Query: 147 QAQLEKMKKYCTVIR--------------KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIP 192
           +   +KM +YC+V+R              KKAH+MEIQVNGG++  KV +A    EK IP
Sbjct: 121 EKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQVNGGNIEDKVKWAREHLEKPIP 180

Query: 193 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 229
           +D+VF +DEMID IGVTKGKGY+GV +RW   +LPRK
Sbjct: 181 VDSVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKLPRK 217


>gi|358443200|gb|AEU11846.1| control protein HCTL036 [Heliconius ismenius]
          Length = 217

 Score =  278 bits (710), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 133/217 (61%), Positives = 168/217 (77%), Gaps = 14/217 (6%)

Query: 27  GKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVV 86
           GKVKAFPKDD SKP  LTAF+GYKAGMTH+VR+ ++PGSK++KKE  EAVT+IETPP+V 
Sbjct: 1   GKVKAFPKDDSSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIVEAVTVIETPPMVC 60

Query: 87  VGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDI 146
           VGVVGY++TP GLR+L TVWA+H++E+ RRRFYKNW K KKKAFTK  KK++ + G+K I
Sbjct: 61  VGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYKCKKKAFTKSNKKWQDELGRKSI 120

Query: 147 QAQLEKMKKYCTVIR--------------KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIP 192
           +   +KM +YC+V+R              KKAH+MEIQVNGG++  KV +A    EK IP
Sbjct: 121 EKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQVNGGNIEDKVKWAREHLEKPIP 180

Query: 193 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 229
           +D+VF +DEMID IGVTKGKGY+GV +RW   +LPRK
Sbjct: 181 VDSVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKLPRK 217


>gi|166952267|gb|ABZ04216.1| ribosomal protein rpl3 [Lineus viridis]
          Length = 208

 Score =  276 bits (707), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 133/208 (63%), Positives = 164/208 (78%), Gaps = 14/208 (6%)

Query: 3   HRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEK 62
           HRKF  PRHGSLGFLP+KR+ RHRGKVKAFPKDD +KPC LTAFLGYKAGMTH+VR+ ++
Sbjct: 1   HRKFSAPRHGSLGFLPKKRSKRHRGKVKAFPKDDRTKPCHLTAFLGYKAGMTHLVREADR 60

Query: 63  PGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNW 122
           PGSK++KKE  EAVTI+ETPP++VVG VGYV+TP+GLR+  T++A+HL EE RRRFYKNW
Sbjct: 61  PGSKINKKEIVEAVTIVETPPMIVVGCVGYVETPKGLRTFKTIFAEHLGEECRRRFYKNW 120

Query: 123 CKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLME 168
            +SKKKAFTKY+KK++ + GKK I+     +KKYC VIR              KKAH+ME
Sbjct: 121 YRSKKKAFTKYSKKWQDEAGKKAIECDFRLIKKYCKVIRVIAHTQMKLMKKRQKKAHIME 180

Query: 169 IQVNGGSVAQKVDFAYGFFEKQIPIDAV 196
           IQVNGG+V+QKV+F     EK+I I+ V
Sbjct: 181 IQVNGGTVSQKVNFVREHMEKKISINTV 208


>gi|226475930|emb|CAX72055.1| ribosomal protein L3 [Schistosoma japonicum]
          Length = 217

 Score =  274 bits (700), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 133/217 (61%), Positives = 163/217 (75%), Gaps = 14/217 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGF P+KR  R RGK KAFP+D  S P  LTAF+GYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFTPKKRCRRIRGKCKAFPRDRRSLPPHLTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  E VTI+E PP+V+VG+VGY  T +GLR+  TVWA+HL EE RRRFYK
Sbjct: 61  DRPGSKVHKREVVEPVTIMECPPMVIVGMVGYAPTAKGLRTFKTVWAEHLTEECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           +WCKSKKKAFTK ++K+  + G   I   L+K+KKYCTV+R              KKAH+
Sbjct: 121 DWCKSKKKAFTKASRKWADEAGLALINRDLKKIKKYCTVVRAIAHTQMRLMKHRQKKAHI 180

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMI 203
           MEIQVNGG+++QKVD+    FEKQIP+  VF +DEMI
Sbjct: 181 MEIQVNGGTISQKVDWIRQHFEKQIPVSNVFSQDEMI 217


>gi|300709014|ref|XP_002996676.1| 60S ribosomal protein L3 [Nosema ceranae BRL01]
 gi|239605995|gb|EEQ83005.1| hypothetical protein NCER_100207 [Nosema ceranae BRL01]
          Length = 384

 Score =  273 bits (697), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 150/318 (47%), Positives = 204/318 (64%), Gaps = 30/318 (9%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD- 59
           MS RKF  PRHGSL F PRKR+   R  ++AFPKDD + P  LT F+GYKAGMTH++R  
Sbjct: 1   MSCRKFNAPRHGSLAFCPRKRSKTIRPPIRAFPKDDCNAPIHLTGFIGYKAGMTHVIRTR 60

Query: 60  VEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEV-RRRF 118
             +  +K   KE  +AVTIIETP  V+ GV GY +T +GL+ + TV++ H+++ V RRR+
Sbjct: 61  TVQTKNKQSVKEILDAVTIIETPANVIYGVTGYEQTGKGLKRIATVFSSHIDQGVLRRRY 120

Query: 119 YKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KK 163
              W +   K          +D   +D + ++ ++KK   +IR               KK
Sbjct: 121 GLKWEEISAKL---------SDCSIEDKEQKIAELKKRACIIRVLVHSQPTKIPVLNLKK 171

Query: 164 AHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 223
           +H  EIQVNGG+V QKVD+A   FEK+I I  +F  +E +D+IGVTKGKG+ GVV R+GV
Sbjct: 172 SHTAEIQVNGGNVEQKVDWALENFEKEINIRDIFDINENLDVIGVTKGKGFTGVVKRFGV 231

Query: 224 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSA 283
           T+ PRK+ +G+RKVACIGAWHP+RV  TVARAG  G+H RTE+NKK+Y +G   ++    
Sbjct: 232 TKQPRKSRKGIRKVACIGAWHPSRVMTTVARAGGKGFHRRTEINKKVYMIGHGKEK---I 288

Query: 284 MTEFDRSVYLLSSLMGSF 301
            TEFD +  L++  MG F
Sbjct: 289 KTEFDLTEKLITP-MGGF 305


>gi|401828521|ref|XP_003887974.1| 60S ribosomal protein L3 [Encephalitozoon hellem ATCC 50504]
 gi|392998982|gb|AFM98993.1| 60S ribosomal protein L3 [Encephalitozoon hellem ATCC 50504]
          Length = 383

 Score =  273 bits (697), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 147/319 (46%), Positives = 200/319 (62%), Gaps = 32/319 (10%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD- 59
           MS RKF  PRHGSL F PRKR+   R    AFP DD S+P  LT F+GYKAGMTH++R  
Sbjct: 1   MSCRKFNAPRHGSLQFCPRKRSKTIRPSAGAFPADDSSQPVHLTGFMGYKAGMTHVIRTK 60

Query: 60  VEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFY 119
            +   +K   +E  +AVTI+E PP+VV G+VGY +T  GLR L  V A ++++ V RR +
Sbjct: 61  TQVAKNKQLSREVMDAVTILEAPPMVVYGIVGYERTVTGLRRLPIVLASYVSDGVLRRMF 120

Query: 120 KNWC--KSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------K 162
            N    K   K F             +D ++++ ++KK    +R               K
Sbjct: 121 GNNYVEKGNSKGFC----------ASEDSESRISEIKKRAECVRVLVQTQPGLIKKLGLK 170

Query: 163 KAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWG 222
           KAH+ EIQVNGGS+++KVD+A    EK++ +  VF ++E ID+IGVTKGKG++G V R+G
Sbjct: 171 KAHIAEIQVNGGSISEKVDWALNMLEKEVHVGDVFGENENIDVIGVTKGKGFQGTVKRFG 230

Query: 223 VTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHS 282
           V + PRK+ +G+RKVACIGAWHP+RV ++VARAGQ G+H RTE NK++Y +G  S    S
Sbjct: 231 VRKQPRKSRKGIRKVACIGAWHPSRVMYSVARAGQMGFHRRTEKNKRVYMVGNGSS---S 287

Query: 283 AMTEFDRSVYLLSSLMGSF 301
             TEFD +   +S  MG F
Sbjct: 288 IRTEFDLTEKFISP-MGGF 305


>gi|78190797|gb|ABB29720.1| ribosomal protein 3 large subunit [Monosiga brevicollis]
          Length = 332

 Score =  271 bits (693), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 148/244 (60%), Positives = 177/244 (72%), Gaps = 14/244 (5%)

Query: 50  KAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQH 109
           KAGMTHIVRD+++ GS  HKKE  EAVT++ETPP+VVVGVVGY  TPRGLR L TVWA H
Sbjct: 1   KAGMTHIVRDLDRTGSLAHKKEVVEAVTVVETPPIVVVGVVGYTSTPRGLRQLTTVWATH 60

Query: 110 LNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR-------- 161
           + E   RR YK++  SKK AF KY  K  T +G++     L +M KYC+VIR        
Sbjct: 61  MAEGFIRRCYKHFAASKKAAFRKYFSKRNTPEGQQQFDDDLARMVKYCSVIRVIVHTQMK 120

Query: 162 ------KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYE 215
                 KKAH+MEIQ+NGGS+ +KVDFA    EK++PI  VF ++E IDIIGVTKG G+E
Sbjct: 121 KLNLGQKKAHVMEIQINGGSIQEKVDFAKSLLEKEVPIKDVFSQNEHIDIIGVTKGHGFE 180

Query: 216 GVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK 275
           GV  RWG  +LPRKTH+GLRKVACIGAWHPA V++ V RAGQ GYHHRTEMNKKIY++G 
Sbjct: 181 GVTHRWGTKKLPRKTHKGLRKVACIGAWHPANVTYAVPRAGQRGYHHRTEMNKKIYRIGA 240

Query: 276 ASQE 279
              E
Sbjct: 241 GYHE 244


>gi|396082145|gb|AFN83757.1| 60S ribosomal protein L3 [Encephalitozoon romaleae SJ-2008]
          Length = 383

 Score =  270 bits (691), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 146/312 (46%), Positives = 201/312 (64%), Gaps = 18/312 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD- 59
           MS RKF  PRHGSL F PRKR+   R    AFP DD S+P  LT F+GYKAGMTH++R  
Sbjct: 1   MSCRKFSAPRHGSLQFCPRKRSKTIRPSAGAFPADDSSQPVHLTGFMGYKAGMTHVIRTK 60

Query: 60  VEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFY 119
           ++   +K   +E  +AVT++E PP+VV GVVGY +T  GLR L  V A ++++ V RR +
Sbjct: 61  IQAAKNKQLSREVMDAVTVLEAPPMVVYGVVGYERTVTGLRRLPIVLAPYVSDGVLRRMF 120

Query: 120 KN----------WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEI 169
            N          +C S++        K + +  +  +Q Q   +KK      KKAH+ EI
Sbjct: 121 GNKHVERENSKRFCASEETESRISEIKKKAECVRVLVQTQPGLIKKLGL---KKAHIAEI 177

Query: 170 QVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 229
           QVNGGS+++KV++     EK+I I  VF+++E ID+IGVTKGKG++G V R+GV + PRK
Sbjct: 178 QVNGGSISEKVEWCLDMLEKEIHIGEVFKENENIDVIGVTKGKGFQGTVKRFGVRKQPRK 237

Query: 230 THRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 289
           + +G+RKVACIGAWHP+RV ++VARAGQ G+H RTE NK++Y +G  +    S  TEFD 
Sbjct: 238 SRKGIRKVACIGAWHPSRVMYSVARAGQMGFHRRTEKNKRVYMVGNGNS---SIRTEFDL 294

Query: 290 SVYLLSSLMGSF 301
           +   +S  MG F
Sbjct: 295 TEKFISP-MGGF 305


>gi|396081112|gb|AFN82731.1| 60S ribosomal protein L3 [Encephalitozoon romaleae SJ-2008]
          Length = 383

 Score =  269 bits (688), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 146/312 (46%), Positives = 201/312 (64%), Gaps = 18/312 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD- 59
           MS RKF  PRHGSL F PRKR+   R    AFP DD S+P  LT F+GYKAGMTH++R  
Sbjct: 1   MSCRKFSAPRHGSLQFCPRKRSKTIRPSPGAFPADDSSQPVHLTGFMGYKAGMTHVIRTK 60

Query: 60  VEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFY 119
           ++   +K   +E  +AVT++E PP+VV GVVGY +T  GLR L  V A ++++ V RR +
Sbjct: 61  IQAAKNKQLSREVMDAVTVLEAPPMVVYGVVGYERTVTGLRRLPIVLAPYVSDGVLRRMF 120

Query: 120 KN----------WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEI 169
            N          +C S++        K + +  +  +Q Q   +KK      KKAH+ EI
Sbjct: 121 GNKHVERENSKRFCASEETESRISEIKKKAECVRVLVQTQPGLIKKLGL---KKAHIAEI 177

Query: 170 QVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 229
           QVNGGS+++KV++     EK+I I  VF+++E ID+IGVTKGKG++G V R+GV + PRK
Sbjct: 178 QVNGGSISEKVEWCLDMLEKEIHIGEVFKENENIDVIGVTKGKGFQGTVKRFGVRKQPRK 237

Query: 230 THRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 289
           + +G+RKVACIGAWHP+RV ++VARAGQ G+H RTE NK++Y +G  +    S  TEFD 
Sbjct: 238 SRKGIRKVACIGAWHPSRVMYSVARAGQMGFHRRTEKNKRVYMVGNGNS---SIRTEFDL 294

Query: 290 SVYLLSSLMGSF 301
           +   +S  MG F
Sbjct: 295 TEKFISP-MGGF 305


>gi|284073166|gb|ADB77822.1| 60S ribosomal protein L3 [Phyllodictyon orientale]
          Length = 236

 Score =  269 bits (688), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 155/238 (65%), Positives = 181/238 (76%), Gaps = 16/238 (6%)

Query: 2   SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
           SHRKFEH R GSLGFLP+KR  R RG+VK+FPKDDPSKP  LTAF+G+KAGMTHIVRDV+
Sbjct: 1   SHRKFEHARCGSLGFLPKKRCRRGRGRVKSFPKDDPSKPPHLTAFMGFKAGMTHIVRDVD 60

Query: 62  KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
           KPGSK+HKKE CE VTI+E PP+VVVGVVGY  T RG R++   WA H+N+ +RRRFYKN
Sbjct: 61  KPGSKVHKKEVCEPVTIVECPPMVVVGVVGYATTHRGQRTIGCAWAAHINDTLRRRFYKN 120

Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLM 167
           W ++KKKAF K+  KY  DDG K I AQLE +KK  TVIR              KKAHL+
Sbjct: 121 WYRAKKKAFKKHATKY--DDGAKTIMAQLEHLKKEATVIRVLAHTQPDMVRLGIKKAHLI 178

Query: 168 EIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           EIQVNGG+   KVDFAY  FEK+I +  +F KDEMID I +TKG+G +GVVTRWGVTR
Sbjct: 179 EIQVNGGTAPDKVDFAYNLFEKEIRVGTIFGKDEMIDTIAITKGRGTQGVVTRWGVTR 236


>gi|303388761|ref|XP_003072614.1| 60S ribosomal protein L3 [Encephalitozoon intestinalis ATCC 50506]
 gi|303301755|gb|ADM11254.1| 60S ribosomal protein L3 [Encephalitozoon intestinalis ATCC 50506]
          Length = 383

 Score =  268 bits (685), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 145/310 (46%), Positives = 202/310 (65%), Gaps = 14/310 (4%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD- 59
           MS RKF  PRHGSL F PRKR+   R  V AFP DD S+P  LT F+GYKAGMTH++R  
Sbjct: 1   MSCRKFNAPRHGSLQFCPRKRSKTIRPSVGAFPADDISQPVHLTGFMGYKAGMTHVIRTK 60

Query: 60  VEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFY 119
            +   +K   +E  +AVT++E PP+VV G+VGY +T  GL  L  V A ++N+ V RR +
Sbjct: 61  TQVAKNKQLSREVMDAVTVVEAPPMVVYGIVGYERTVTGLHRLPIVTASYVNDGVLRRMF 120

Query: 120 KNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYC--------TVIRKKAHLMEIQV 171
            N    K+ A  ++ +   T+   ++I+ + E ++           T+  KKAH+ EIQ+
Sbjct: 121 GNKYMEKEAA-AQFCRGEVTESRVEEIKKRAECVRVLVQTQPEMVKTLGLKKAHIAEIQL 179

Query: 172 NGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 231
           NGGS+ +KV++A    EK+I I  VF ++E ID+IGVTKGKG++G V R+GV + PRK+ 
Sbjct: 180 NGGSICEKVEWALERLEKEIQIAEVFGENENIDVIGVTKGKGFQGTVKRFGVRKQPRKSR 239

Query: 232 RGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRSV 291
           +G+RKVACIGAWHP+RV ++VARAGQ G+H RTE NK++Y +G  S +     TEFD + 
Sbjct: 240 KGIRKVACIGAWHPSRVMYSVARAGQMGFHRRTEKNKRVYMIGNGSTK---IKTEFDLTE 296

Query: 292 YLLSSLMGSF 301
             +S  MG F
Sbjct: 297 KAISP-MGGF 305


>gi|303390711|ref|XP_003073586.1| 60S ribosomal protein L3 [Encephalitozoon intestinalis ATCC 50506]
 gi|303302733|gb|ADM12226.1| 60S ribosomal protein L3 [Encephalitozoon intestinalis ATCC 50506]
          Length = 383

 Score =  266 bits (681), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 144/310 (46%), Positives = 201/310 (64%), Gaps = 14/310 (4%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD- 59
           MS RKF  PRHGSL F PRKR+   R  V AFP DD S+P  LT F+GYKAGMTH++R  
Sbjct: 1   MSCRKFNAPRHGSLQFCPRKRSKTIRPSVGAFPADDISQPVHLTGFMGYKAGMTHVIRTK 60

Query: 60  VEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFY 119
            +   +K   +E  +AVT++E PP+VV G+VGY +T  GL  L  V   ++N+ V RR +
Sbjct: 61  TQVAKNKQLSREVMDAVTVVEAPPMVVYGIVGYERTVTGLHRLPIVTVSYVNDGVLRRMF 120

Query: 120 KNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYC--------TVIRKKAHLMEIQV 171
            N    K+ A  ++ +   T+   ++I+ + E ++           T+  KKAH+ EIQ+
Sbjct: 121 GNKYMEKEAA-AQFCRGEVTESRVEEIKKRAECVRVLVQTQPEMVKTLGLKKAHIAEIQL 179

Query: 172 NGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 231
           NGGS+ +KV++A    EK+I I  VF ++E ID+IGVTKGKG++G V R+GV + PRK+ 
Sbjct: 180 NGGSICEKVEWALERLEKEIQIAEVFGENENIDVIGVTKGKGFQGTVKRFGVRKQPRKSR 239

Query: 232 RGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRSV 291
           +G+RKVACIGAWHP+RV ++VARAGQ G+H RTE NK++Y +G  S +     TEFD + 
Sbjct: 240 KGIRKVACIGAWHPSRVMYSVARAGQMGFHRRTEKNKRVYMIGNGSTK---IKTEFDLTE 296

Query: 292 YLLSSLMGSF 301
             +S  MG F
Sbjct: 297 KAISP-MGGF 305


>gi|401825791|ref|XP_003886990.1| 60S ribosomal protein L3 [Encephalitozoon hellem ATCC 50504]
 gi|392998147|gb|AFM98009.1| 60S ribosomal protein L3 [Encephalitozoon hellem ATCC 50504]
          Length = 383

 Score =  266 bits (681), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 144/312 (46%), Positives = 197/312 (63%), Gaps = 18/312 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD- 59
           MS RKF  PRHGSL F PRKR++       AFP DD S+P  LT F+G KAGMTH++R  
Sbjct: 1   MSCRKFNAPRHGSLQFCPRKRSNTITPSAGAFPADDSSQPVHLTGFMGDKAGMTHVIRTK 60

Query: 60  VEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFY 119
            +   +K   +E  +A+TI+E PP+VV G+VGY +T  GLR L  V A ++++ V RR +
Sbjct: 61  TQVAKNKQLSREVMDALTILEAPPMVVYGIVGYERTVTGLRRLPIVLASYVSDGVLRRMF 120

Query: 120 KN----------WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEI 169
            N          +C S+         K   +  +  +Q Q   +KK      KKAH+ EI
Sbjct: 121 GNNYVEKGNSKGFCASEDSESRISEIKKRAECVRVLVQTQPGLIKKLAL---KKAHIAEI 177

Query: 170 QVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 229
           QVNGGS+++KVD+A    EK++ +  VF ++E ID+IGVTKGKG++G V R+GV + PRK
Sbjct: 178 QVNGGSISEKVDWALNMLEKEVHVGDVFGENENIDVIGVTKGKGFQGTVKRFGVRKQPRK 237

Query: 230 THRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 289
           + +G+RKVACIGAWHP+RV ++VARAGQ G+H RTE NK++Y +G  S    S  TEFD 
Sbjct: 238 SRKGIRKVACIGAWHPSRVMYSVARAGQMGFHRRTEKNKRVYMVGNGSS---SIRTEFDL 294

Query: 290 SVYLLSSLMGSF 301
           +   +S  MG F
Sbjct: 295 TEKFISP-MGGF 305


>gi|330039014|ref|XP_003239763.1| 60S ribosomal protein L3 [Cryptomonas paramecium]
 gi|327206688|gb|AEA38865.1| 60S ribosomal protein L3 [Cryptomonas paramecium]
          Length = 331

 Score =  266 bits (680), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 128/243 (52%), Positives = 171/243 (70%), Gaps = 22/243 (9%)

Query: 53  MTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNE 112
           MTH++++V+KPGSKLHKK+  EA T++ETPPLV+ G+VGYV TP+GL++  T+W+ +L+ 
Sbjct: 1   MTHVIKEVDKPGSKLHKKDVIEAATVVETPPLVIAGIVGYVSTPKGLKAFKTIWSDNLSH 60

Query: 113 EVRRRFYKNWCKSKKKAFTKY---TKKYETDDGKKDIQAQLEKMKKYCTVIR-------- 161
           +  R +YKNW KSKKKAF+KY    KK  T   K  +Q     MKK+C V R        
Sbjct: 61  QFLRNYYKNWYKSKKKAFSKYFIVKKKISTFFEKNVLQ-----MKKFCKVFRFIVHPNIC 115

Query: 162 ------KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYE 215
                 KKA + EIQVNGGS+  K+ F       Q+ ++ VF+  E +D I +TKGKG+ 
Sbjct: 116 QTSMKKKKAEICEIQVNGGSIHDKISFCLKLLGNQVTVNTVFKDGEYVDTIAITKGKGFT 175

Query: 216 GVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK 275
           GVV RWGVT+LPRKT RG RKVACIG+WHP+RVS++V RAGQ GYHHRT+ N ++YK+GK
Sbjct: 176 GVVQRWGVTKLPRKTRRGARKVACIGSWHPSRVSYSVPRAGQKGYHHRTQSNIQVYKIGK 235

Query: 276 ASQ 278
           +S+
Sbjct: 236 SSK 238


>gi|19173079|ref|NP_597630.1| 60S ribosomal protein L3 [Encephalitozoon cuniculi GB-M1]
 gi|85014317|ref|XP_955654.1| 60S ribosomal protein L3 [Encephalitozoon cuniculi GB-M1]
 gi|51701710|sp|Q8SQI3.1|RL3_ENCCU RecName: Full=60S ribosomal protein L3
 gi|19168746|emb|CAD26265.1| 60S RIBOSOMAL PROTEIN L3 [Encephalitozoon cuniculi GB-M1]
 gi|19171348|emb|CAD27073.1| 60S RIBOSOMAL PROTEIN L3 [Encephalitozoon cuniculi GB-M1]
          Length = 383

 Score =  266 bits (679), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 148/315 (46%), Positives = 202/315 (64%), Gaps = 24/315 (7%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD- 59
           MS RKF  PRHGSL F PRKR+   R    AFP DD S+P  LT F+ YKAGMTH+VR  
Sbjct: 1   MSCRKFNAPRHGSLQFCPRKRSKTIRPAAGAFPADDRSQPVHLTGFMAYKAGMTHVVRTK 60

Query: 60  VEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFY 119
            +   +K   +E  +AVT++E PP+VV G+VGY KT  GLR L  V A ++++ V RR +
Sbjct: 61  TQVAKNKQLSREIMDAVTVLEAPPMVVYGIVGYEKTVTGLRRLPIVTAAYVSDGVLRRMF 120

Query: 120 KNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYC---------TVIR----KKAHL 166
            N   SK+ A  ++ K    +      + ++ K + +C         T+I+    KKAH+
Sbjct: 121 GNRYASKESA-GQFCKGSVCES-----RVEMIKERAHCVRVLVQTQPTLIKGLGLKKAHI 174

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQVNGGS+++KV++A G  EK+I I  VF  +E ID IGVTKGKG++G V R+GV + 
Sbjct: 175 AEIQVNGGSISEKVEWALGRLEKEIAIGEVFGVNENIDTIGVTKGKGFQGTVKRFGVRKQ 234

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRK+ +G+RKVACIGAWHP+RV +++ARAGQ G+H RTE NK++Y +G  S    +  TE
Sbjct: 235 PRKSRKGIRKVACIGAWHPSRVMYSIARAGQMGFHRRTEKNKRVYMIGNGSS---NIKTE 291

Query: 287 FDRSVYLLSSLMGSF 301
           FD +   +S  MG F
Sbjct: 292 FDLTEKPISP-MGGF 305


>gi|449330139|gb|AGE96402.1| 60S ribosomal protein l3 [Encephalitozoon cuniculi]
          Length = 383

 Score =  266 bits (679), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 148/315 (46%), Positives = 202/315 (64%), Gaps = 24/315 (7%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD- 59
           MS RKF  PRHGSL F PRKR+   R    AFP DD S+P  LT F+ YKAGMTH+VR  
Sbjct: 1   MSCRKFNAPRHGSLQFCPRKRSKTIRPAAGAFPADDRSQPVHLTGFMAYKAGMTHVVRTK 60

Query: 60  VEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFY 119
            +   +K   +E  +AVT++E PP+VV G+VGY KT  GLR L  V A ++++ V RR +
Sbjct: 61  TQVAKNKQLSREIMDAVTVLEAPPMVVYGIVGYEKTVTGLRRLPIVTAAYVSDGVLRRMF 120

Query: 120 KNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYC---------TVIR----KKAHL 166
            N   SK+ A  ++ K    +      + ++ K + +C         T+I+    KKAH+
Sbjct: 121 GNRYASKESA-GQFCKGSVCES-----RVEMIKERAHCVRVLVQTQPTLIKGLGLKKAHI 174

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQVNGGS+++KV++A G  EK+I I  VF  +E ID IGVTKGKG++G V R+GV + 
Sbjct: 175 AEIQVNGGSISEKVEWALGRLEKEIAIGEVFGVNENIDTIGVTKGKGFQGTVKRFGVRKQ 234

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
           PRK+ +G+RKVACIGAWHP+RV +++ARAGQ G+H RTE NK++Y +G  S    +  TE
Sbjct: 235 PRKSRKGIRKVACIGAWHPSRVMYSIARAGQMGFHRRTEKNKRVYMIGNGSS---NIKTE 291

Query: 287 FDRSVYLLSSLMGSF 301
           FD +   +S  MG F
Sbjct: 292 FDLTEKPISP-MGGF 305


>gi|383132709|gb|AFG47248.1| Pinus taeda anonymous locus 2_207_02 genomic sequence
          Length = 143

 Score =  265 bits (676), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 121/139 (87%), Positives = 135/139 (97%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRA RHRGKVK+FP+DDPSKPC+LTAFLGYKAGMTHIVR+V
Sbjct: 5   MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPRDDPSKPCKLTAFLGYKAGMTHIVREV 64

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVT+IETPP+V+VGVVGY+KTPRGLR+L TVWAQHL+EEVRRRFYK
Sbjct: 65  EKPGSKLHKKETCEAVTVIETPPMVIVGVVGYIKTPRGLRTLNTVWAQHLSEEVRRRFYK 124

Query: 121 NWCKSKKKAFTKYTKKYET 139
           NW ++KKKAFTKY KKY++
Sbjct: 125 NWYRAKKKAFTKYAKKYDS 143


>gi|361067623|gb|AEW08123.1| Pinus taeda anonymous locus 2_207_02 genomic sequence
 gi|383132710|gb|AFG47249.1| Pinus taeda anonymous locus 2_207_02 genomic sequence
          Length = 143

 Score =  264 bits (675), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 121/139 (87%), Positives = 135/139 (97%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKRA RHRGKVK+FP+DDPSKPC+LTAFLGYKAGMTHIVR+V
Sbjct: 5   MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPRDDPSKPCKLTAFLGYKAGMTHIVREV 64

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKLHKKETCEAVT+IETPP+V+VGVVGY+KTPRGLR+L TVWAQHL+EEVRRRFYK
Sbjct: 65  EKPGSKLHKKETCEAVTLIETPPMVIVGVVGYIKTPRGLRTLNTVWAQHLSEEVRRRFYK 124

Query: 121 NWCKSKKKAFTKYTKKYET 139
           NW ++KKKAFTKY KKY++
Sbjct: 125 NWYRAKKKAFTKYAKKYDS 143


>gi|301791988|ref|XP_002930962.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L3-like,
           partial [Ailuropoda melanoleuca]
          Length = 355

 Score =  264 bits (674), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 139/276 (50%), Positives = 182/276 (65%), Gaps = 42/276 (15%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           +SHRKF  PRHGSLGFLP+K +S H G+  +FPKDD SKP  LTAFLGYKAGMTHIV +V
Sbjct: 5   ISHRKFSIPRHGSLGFLPQKCSSWHHGRXTSFPKDDSSKPIHLTAFLGYKAGMTHIVXEV 64

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
            +PGSK+ KKE  E VTI+E P + VVG +GY +T +GL +L T++A+H++++ +R FYK
Sbjct: 65  SRPGSKVKKKEIVEDVTIVEAPSM-VVGTMGYEETIQGLCTLKTIFAEHIHDKCKRHFYK 123

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKV 180
           NW KS KKAF KY  K++ +DGK+ ++     M +Y  +I                    
Sbjct: 124 NWGKS-KKAFNKYC-KWQDNDGKQQLEKDFNSM-RYGQIIH------------------- 161

Query: 181 DFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACI 240
                              DEMI +I VTKGKGY+ V + W   +LP KTH+GL KV CI
Sbjct: 162 -------------------DEMIHVISVTKGKGYKEVTSHWHTKKLPCKTHQGLCKVGCI 202

Query: 241 GAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA 276
           GAWHPA+V+F++A AGQ GYHH TE+NKKIYK+G++
Sbjct: 203 GAWHPAQVAFSMAWAGQKGYHHCTEINKKIYKIGQS 238


>gi|402471198|gb|EJW05055.1| hypothetical protein EDEG_00836 [Edhazardia aedis USNM 41457]
          Length = 408

 Score =  263 bits (673), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 151/332 (45%), Positives = 208/332 (62%), Gaps = 41/332 (12%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MS RK+E PRHGSL + PRKRA+  +  ++AFPKD   + C LTA +GYK GM+HI+R  
Sbjct: 1   MSCRKYEAPRHGSLAYCPRKRANSVKQSLRAFPKDKGGE-CHLTATIGYKTGMSHIIRTS 59

Query: 61  EK--PGSKLHKKETCE---AVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVR 115
           E+  P  K  K  T E   AVT IE PP+++ G+VGY KT  GL+    ++A++L++ V 
Sbjct: 60  ERQRPTQKKQKATTHEVFDAVTFIECPPVIIFGIVGYKKTITGLKVHSRLFAKNLSDGVL 119

Query: 116 RRFYK------------NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR-- 161
           R + +            N   S K     Y +KY   D + +I+ +++ +KK C  IR  
Sbjct: 120 RAYNRRHTLKVNSASNPNTTVSTKNPLDFYVRKY---DDENEIENEIKNLKK-CDSIRVL 175

Query: 162 -------------KKAHLMEIQVNGG-SVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIG 207
                        KK+H+ME+QVNGG +V +KVD+A    EK+IPI  VFQ  E+IDII 
Sbjct: 176 IQSQTEKIRTLNTKKSHVMEVQVNGGKNVCEKVDWALENMEKEIPIKQVFQDQEIIDIIA 235

Query: 208 VTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMN 267
           VTKGKG++G   R+G   LPRKT++GLRKVACIGAWHP+RV +TV RAGQ G+H RTE+N
Sbjct: 236 VTKGKGFQGCTKRFGTRILPRKTNKGLRKVACIGAWHPSRVMWTVPRAGQMGFHRRTEIN 295

Query: 268 KKIYKLGKASQESHSAMTEFDRSVYLLSSLMG 299
           K+IYK+G  ++    A TEFD +   ++ + G
Sbjct: 296 KRIYKIGNGTE---LAKTEFDLTPKTINPVGG 324


>gi|224095129|ref|XP_002195484.1| PREDICTED: 60S ribosomal protein L3-like [Taeniopygia guttata]
          Length = 177

 Score =  261 bits (666), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 121/165 (73%), Positives = 144/165 (87%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTIIETPP+V+VG+VGYV+TPRGLRS  T++A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIIETPPMVIVGIVGYVQTPRGLRSFKTIFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAH 165
           NW KSKKKAFTKY KK++ +DGKK ++     MKKYC VIR  AH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFNSMKKYCQVIRVMAH 165


>gi|149065895|gb|EDM15768.1| ribosomal protein L3, isoform CRA_a [Rattus norvegicus]
          Length = 238

 Score =  259 bits (663), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 121/165 (73%), Positives = 143/165 (86%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  TV+A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAH 165
           NW KSKKKAFTKY KK++ D GKK ++     MKKYC VIR  AH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAH 165


>gi|183235559|ref|XP_001914254.1| 60S ribosomal protein L3 [Entamoeba histolytica HM-1:IMSS]
 gi|169800490|gb|EDS88972.1| 60S ribosomal protein L3, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 350

 Score =  259 bits (662), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 131/250 (52%), Positives = 170/250 (68%), Gaps = 16/250 (6%)

Query: 53  MTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNE 112
           MTH++R+V++  +KL K    E VTIIETPP+VV G VGY KT  GL+ +  V+A+H+ +
Sbjct: 1   MTHVIREVKRTNTKLPKDGVLEPVTIIETPPMVVAGFVGYKKTTTGLKPITAVFAEHIAD 60

Query: 113 EVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR----------- 161
           E +RR+ K W K+ K  F  +T+KY     K   + Q+  +K  C V+R           
Sbjct: 61  EFKRRYTKKWYKNTKNQFAVHTEKYNDVKAKSKRERQIRLIKNRCDVVRVIAHTQMALVP 120

Query: 162 ---KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVV 218
              KKA +MEIQ+NGGS+A+KVDFA    EKQI +++VF  DE ID+  VTKG GY GV+
Sbjct: 121 LKQKKAEVMEIQINGGSIAEKVDFAVSLLEKQISVNSVFGTDECIDVCSVTKGHGYNGVI 180

Query: 219 TRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ 278
            R+GV  LPRKTHRGLRKVAC+GAWHPARVS+TVARAGQ G+  RTE+NKKIY+LG    
Sbjct: 181 KRFGVRHLPRKTHRGLRKVACVGAWHPARVSWTVARAGQMGFFKRTEVNKKIYRLG--CG 238

Query: 279 ESHSAMTEFD 288
           +  +A TEFD
Sbjct: 239 DLKNAKTEFD 248


>gi|295646729|gb|ADG23115.1| 60S ribosomal protein L3 [Rhizoplaca chrysoleuca]
          Length = 180

 Score =  259 bits (662), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 125/179 (69%), Positives = 150/179 (83%), Gaps = 4/179 (2%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSL FLPRKRASRHRGKVK+FPKD+P +P  LTA +GYKAGMT IVRD+
Sbjct: 1   MSHRKFEAPRHGSLAFLPRKRASRHRGKVKSFPKDNPKEPVHLTAAMGYKAGMTTIVRDL 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PG+KLHKKE  EAVT+IETPP++VVG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61  DRPGAKLHKKEIVEAVTVIETPPMMVVGIVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQK 179
           NW KSKKKAFTKY KK+  D G K I  +LE++KKYCTV+R  AH    QV+   + QK
Sbjct: 121 NWYKSKKKAFTKYAKKHAEDSG-KPINRELERIKKYCTVVRVLAHH---QVSKTPLKQK 175


>gi|160550199|gb|ABX44804.1| putative 60S ribosomal protein RPL3 [Flustra foliacea]
          Length = 185

 Score =  258 bits (660), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 124/185 (67%), Positives = 148/185 (80%), Gaps = 14/185 (7%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHG+LGF+P+KR+ RHRGKVK+FP DDP KP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGNLGFIPKKRSKRHRGKVKSFPSDDPRKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
            +PGSK++KKE  EAVTIIETPPLVVVGV GY++TPRGLR+L T+WA+HL+EE RRRFYK
Sbjct: 61  NRPGSKVNKKEIVEAVTIIETPPLVVVGVTGYIETPRGLRTLGTIWAEHLSEECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW  +KKKAFTKY KK++ +DGKK I+    K+ K+CT+IR              KKA+L
Sbjct: 121 NWYHAKKKAFTKYAKKWQDEDGKKVIERDFNKLSKHCTIIRVLCHTQMKLLNQRQKKANL 180

Query: 167 MEIQV 171
           MEIQV
Sbjct: 181 MEIQV 185


>gi|284073152|gb|ADB77815.1| 60S ribosomal protein L3 [Bryopsis sp. EE4]
          Length = 217

 Score =  258 bits (659), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 128/219 (58%), Positives = 154/219 (70%), Gaps = 18/219 (8%)

Query: 24  RHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPP 83
           R +GK+K+FPKDD S+P  LT F+GYKAG THIVR+V++P SKLHKKETCE VTI+E PP
Sbjct: 1   RGKGKIKSFPKDDASQPPHLTGFMGYKAGSTHIVREVDRPNSKLHKKETCETVTIVECPP 60

Query: 84  LVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGK 143
           ++VV  +GYV T  G  S  TVWAQHL +E++RRFYK W  S+++AF  Y KKY+  DG 
Sbjct: 61  MIVVAAIGYVSTANGPVSKYTVWAQHLTDEMKRRFYKRWHTSQRRAFCNYAKKYQ--DGS 118

Query: 144 KDIQAQLEKMKKYCTVIR----------------KKAHLMEIQVNGGSVAQKVDFAYGFF 187
            +I+  L KMK  C  IR                KK H MEIQVNGG+V  KVDFAY  F
Sbjct: 119 TEIEDTLRKMKDECVSIRILAHTQISKTPLKRFQKKGHCMEIQVNGGTVPDKVDFAYKLF 178

Query: 188 EKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           EK + +D+VFQ +EMID I VTKG G EGVVTRWGVTRL
Sbjct: 179 EKGVSVDSVFQPNEMIDTIAVTKGCGTEGVVTRWGVTRL 217


>gi|84998984|ref|XP_954213.1| 60S ribosomal protein l3 [Theileria annulata]
 gi|65305211|emb|CAI73536.1| 60S ribosomal protein l3, putative [Theileria annulata]
          Length = 203

 Score =  257 bits (657), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 121/197 (61%), Positives = 154/197 (78%), Gaps = 17/197 (8%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PR GSLGFLP+KR+  HR K+++FPKDD +KP  LTAF+GYKAGMTH+V +V
Sbjct: 1   MSHRKFERPRSGSLGFLPKKRSRTHRAKIRSFPKDDITKPPHLTAFIGYKAGMTHVVTEV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSKLHKKE  EAVTI+ETPP++VVG+VGYV+TPRGL+ L TVWA HL++E+RRRFYK
Sbjct: 61  DRPGSKLHKKEIVEAVTIVETPPMIVVGLVGYVETPRGLKVLGTVWAGHLSDELRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KSKKKAFTKY KKY   +G   ++ +L+++K Y TVIR              +KAHL
Sbjct: 121 NWYKSKKKAFTKYAKKYVETNG---MELELKRLKNYSTVIRALLHTQPSKTSLSLRKAHL 177

Query: 167 MEIQVNGGSVAQKVDFA 183
           +E+Q+NGG++ QKV   
Sbjct: 178 LEVQINGGTIDQKVSIT 194


>gi|225006193|dbj|BAH28892.1| ribosomal protein L3 [Polypedilum vanderplanki]
          Length = 204

 Score =  257 bits (657), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 123/196 (62%), Positives = 148/196 (75%), Gaps = 14/196 (7%)

Query: 2   SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
           SHRKF  PRHGS+ F P+KRA RHRGKVKAFPKDDP+KP  LT F+ YKAGMTHIVR+ +
Sbjct: 2   SHRKFSAPRHGSMAFYPKKRAQRHRGKVKAFPKDDPTKPVHLTCFISYKAGMTHIVREAD 61

Query: 62  KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
           +PGSK++KKE  EAVTI+ETPP+VVVG VGY++TP G R+LC VWAQHL+EE RRRFYKN
Sbjct: 62  RPGSKINKKEVVEAVTILETPPIVVVGAVGYIETPHGPRALCNVWAQHLSEECRRRFYKN 121

Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLM 167
           W  SKKKAFTK +KK+  D GKK I+   +KM +YC  IR              KKAH+M
Sbjct: 122 WYSSKKKAFTKASKKWTDDLGKKTIEDNFKKMIRYCKYIRIIVHSQIRLIKQGQKKAHIM 181

Query: 168 EIQVNGGSVAQKVDFA 183
           EIQ+NGG++  KV + 
Sbjct: 182 EIQLNGGTIEDKVQWV 197


>gi|148672668|gb|EDL04615.1| mCG11520, isoform CRA_a [Mus musculus]
          Length = 238

 Score =  256 bits (655), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 120/165 (72%), Positives = 142/165 (86%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  TV+A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAH 165
           NW KSKKKAFTKY KK++ D GKK ++     MKKYC VIR  AH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAH 165


>gi|392349059|ref|XP_003750279.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L3-like
           [Rattus norvegicus]
          Length = 358

 Score =  256 bits (653), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 140/307 (45%), Positives = 191/307 (62%), Gaps = 40/307 (13%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MS+R F  PRHGSLGF P+K +  H GKVK FPKDD SKP  LT FL +KA MTHI++ V
Sbjct: 1   MSYRNFSAPRHGSLGFSPQKHSCWHHGKVKLFPKDDSSKPVHLTDFLVHKANMTHIIQKV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++P SK++KKE  E V I+ETPP+VV+G+VGY++ PRGL +   V+A+H++ + ++ FYK
Sbjct: 61  DRPESKMNKKEVVEGVAIVETPPMVVMGIVGYIEIPRGLWTFKAVFAEHISGKSKKCFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKV 180
           NW              +  ++G   I  ++           KKAHLMEIQV  G    + 
Sbjct: 121 NW--------------HLXEEGLHQILREM-----------KKAHLMEIQVM-GHCGXEA 154

Query: 181 DFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACI 240
             ++     +  ++ VF  DE+ID+I  TKG GY+GV       +LP KTHRGL KVAC+
Sbjct: 155 RLSW-----REAVNQVFGXDEIIDVIKETKGNGYKGVTRVXHTKKLPXKTHRGLPKVACV 209

Query: 241 GAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQESHSAMTEF---DRSV 291
           GAWHPARV+F+VA+ GQ GYHH TE NKKI K+G+           ++A TE+   D+S+
Sbjct: 210 GAWHPARVTFSVAQVGQKGYHHXTEXNKKICKIGQGYLIKDGKLIKNNAPTEYHLSDKSI 269

Query: 292 YLLSSLM 298
            LL   +
Sbjct: 270 NLLGGFV 276


>gi|427188202|dbj|BAM69086.1| 60S ribosomal protein L3, partial [Peranema trichophorum]
          Length = 333

 Score =  256 bits (653), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 120/216 (55%), Positives = 160/216 (74%), Gaps = 15/216 (6%)

Query: 80  ETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYET 139
           ETPP++VVG+VGY++TPRG R+L T+WA+ L     R  YKN+  SKKKA+  Y  K + 
Sbjct: 1   ETPPMIVVGIVGYIRTPRGYRTLKTIWAEQLPVGFIRSLYKNYALSKKKAYKNYLAKKKQ 60

Query: 140 DDGKKDIQAQLEKMKKYCTVIR---------------KKAHLMEIQVNGGSVAQKVDFAY 184
           + GK+  +  +  +KKYC++IR               KK+H MEIQ+NGGS A+KVDFA 
Sbjct: 61  EKGKQQTERDIASLKKYCSIIRVIAITQAHKIPVLRQKKSHNMEIQINGGSTAEKVDFAL 120

Query: 185 GFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWH 244
              E+ +P++ VFQ+ EM+D+I  TKG G+EGV+ RWGVTRLPRKTH+GLRKVACIGAWH
Sbjct: 121 KLLEQPLPVNTVFQESEMVDVIATTKGHGFEGVIHRWGVTRLPRKTHKGLRKVACIGAWH 180

Query: 245 PARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           PARV FTV RAGQNG+HHRTE++KKI+K+GK++++ 
Sbjct: 181 PARVGFTVPRAGQNGFHHRTEIHKKIFKIGKSAEDD 216


>gi|68065494|ref|XP_674730.1| ribosomal protein L3 [Plasmodium berghei strain ANKA]
 gi|56493491|emb|CAH94107.1| ribosomal protein L3, putative [Plasmodium berghei]
          Length = 225

 Score =  255 bits (651), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 126/230 (54%), Positives = 160/230 (69%), Gaps = 19/230 (8%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSLGFLPRKR  R RGK+++FPKD+       TAF+GYK+GM+HIVR+V
Sbjct: 1   MSHRKFERPRHGSLGFLPRKRCKRLRGKIRSFPKDNKELAPHFTAFMGYKSGMSHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           +KPGSKLHKKE  EA TI+E  P+VVVG+VGY +TP+GL+ L  VWA H+++E RRR+YK
Sbjct: 61  DKPGSKLHKKEIVEACTIVECAPMVVVGMVGYRETPKGLKVLTAVWANHVSDEFRRRYYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KS KKAFTK     +T   K        +++KYCT++R              KKAH+
Sbjct: 121 NWYKSDKKAFTKCLNIPDTTKEK-----LYNRIEKYCTILRAICHTQPSKTPLRLKKAHI 175

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEG 216
           MEIQ+NGG +  K++F     EK IP+  VF  +EMID+I VTKG G +G
Sbjct: 176 MEIQINGGHMKDKINFVKELLEKNIPVTNVFNTNEMIDVISVTKGHGTKG 225


>gi|5762260|dbj|BAA83471.1| Csf-3 [Cucumis sativus]
          Length = 219

 Score =  255 bits (651), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 118/141 (83%), Positives = 132/141 (93%), Gaps = 1/141 (0%)

Query: 161 RKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTR 220
           +KKAHLMEIQVNGGS+AQK D+AYGFFEKQ+P++AVFQKDEMID+IGVTKGKGYEGVVTR
Sbjct: 6   QKKAHLMEIQVNGGSIAQKXDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTR 65

Query: 221 WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YK+GK  QES
Sbjct: 66  WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKIGKTGQES 125

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           H+A+TEFDR+   ++  MG F
Sbjct: 126 HTAITEFDRTEKDITP-MGGF 145


>gi|392341252|ref|XP_003754289.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L3-like
           [Rattus norvegicus]
          Length = 358

 Score =  255 bits (651), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 140/307 (45%), Positives = 190/307 (61%), Gaps = 40/307 (13%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MS+R F  PRHGSLGF P+K +  H GKVK FPKDD SKP  LT FL +KA MTHI++ V
Sbjct: 1   MSYRNFSAPRHGSLGFSPQKHSCWHHGKVKLFPKDDSSKPVHLTDFLVHKANMTHIIQKV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++P SK++KKE  E V I+ETPP+VV+G+VGY++ PRGL +   V+A+H+  + ++ FYK
Sbjct: 61  DRPESKMNKKEVVEGVAIVETPPMVVMGIVGYIEIPRGLWTFKAVFAEHIGGKSKKCFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKV 180
           NW              +  ++G   I  ++           KKAHLMEIQV  G    + 
Sbjct: 121 NW--------------HIXEEGLHQILREM-----------KKAHLMEIQVM-GHCGXEA 154

Query: 181 DFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACI 240
             ++     +  ++ VF  DE+ID+I  TKG GY+GV       +LP KTHRGL KVAC+
Sbjct: 155 RLSW-----REAVNQVFGXDEIIDVIKETKGNGYKGVTRVXHTKKLPXKTHRGLPKVACV 209

Query: 241 GAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQESHSAMTEF---DRSV 291
           GAWHPARV+F+VA+ GQ GYHH TE NKKI K+G+           ++A TE+   D+S+
Sbjct: 210 GAWHPARVTFSVAQVGQKGYHHXTEXNKKICKIGQGYLIKDGKLIKNNAPTEYHLSDKSI 269

Query: 292 YLLSSLM 298
            LL   +
Sbjct: 270 NLLGGFV 276


>gi|444724683|gb|ELW65282.1| 60S ribosomal protein L3 [Tupaia chinensis]
          Length = 322

 Score =  254 bits (650), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 145/319 (45%), Positives = 185/319 (57%), Gaps = 101/319 (31%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLP+KR+SRHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIV++V
Sbjct: 1   MSHRKFSVPRHGSLGFLPQKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVQEV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
            +PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  T+ A+H+++E +RRFYK
Sbjct: 61  NRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTILAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVI--------------RKKAHL 166
           N                               MKKYC VI              +KKAHL
Sbjct: 121 NC------------------------------MKKYCQVIHVITHTQMRLLPLCQKKAHL 150

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+VA+K+D+A    E+Q+ ++ VF + EMID+IG                   
Sbjct: 151 MEIQVNGGTVAEKLDWAREQLEQQVSVNQVFGQVEMIDVIG------------------- 191

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQES 280
                                           GYHHRTE+N KIYK+G+           
Sbjct: 192 -------------------------------KGYHHRTEIN-KIYKIGQGYLIKDGKLIK 219

Query: 281 HSAMTEFDRSVYLLSSLMG 299
           ++A T++D S   +++L G
Sbjct: 220 NNASTDYDLSDKSINALGG 238


>gi|156376964|ref|XP_001630628.1| predicted protein [Nematostella vectensis]
 gi|156217652|gb|EDO38565.1| predicted protein [Nematostella vectensis]
          Length = 216

 Score =  254 bits (648), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 122/183 (66%), Positives = 145/183 (79%), Gaps = 3/183 (1%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSLGFLPRKR  RHRGKVK+FPKDD + P  LTAF+G+KAGMTHI+R+V
Sbjct: 1   MSHRKFEAPRHGSLGFLPRKRCKRHRGKVKSFPKDDNTLPPHLTAFIGFKAGMTHILREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           EKPGSKL+KKE  EAVTIIETPP++VVGVVGY++TPRG+R L T+WA+HL+EE +RRFYK
Sbjct: 61  EKPGSKLNKKEKVEAVTIIETPPMMVVGVVGYIETPRGMRVLKTIWAEHLSEECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQV---NGGSVA 177
           NWC SKKKAFTK +K++  DDGKK I+     MKKYC VIR   H    ++    GG + 
Sbjct: 121 NWCNSKKKAFTKASKRWADDDGKKSIEEDFNTMKKYCKVIRVICHTQNAKLPRFGGGCLL 180

Query: 178 QKV 180
            K 
Sbjct: 181 LKC 183


>gi|67594775|ref|XP_665877.1| hypothetical protein [Cryptosporidium hominis TU502]
 gi|54656728|gb|EAL35641.1| hypothetical protein Chro.50225 [Cryptosporidium hominis]
          Length = 305

 Score =  252 bits (643), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 122/232 (52%), Positives = 168/232 (72%), Gaps = 19/232 (8%)

Query: 84  LVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGK 143
           ++ VG VGY++TP GLR+L TV+A +L+EE +RRFYKN+ +SK+KAFTKY + Y  +   
Sbjct: 1   MICVGFVGYIETPNGLRALTTVFAGYLSEECKRRFYKNYYRSKRKAFTKYARNYAEN--- 57

Query: 144 KDIQAQLEKMKKYCTVIR--------------KKAHLMEIQVNGGSVAQKVDFAYGFFEK 189
           + ++A++ + K+YCTVIR              KKA +MEIQVNGG+V+ K+DF    FE+
Sbjct: 58  QRMEAEIARCKQYCTVIRALCHTQVSKTGLNKKKADIMEIQVNGGTVSDKIDFCVRCFEQ 117

Query: 190 QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 249
            IP+  +F ++EMIDIIG++KGKGY+GV++RWGVT+LPRKT RG+RKV+CIGAWHPARV 
Sbjct: 118 PIPVSTIFNENEMIDIIGISKGKGYKGVISRWGVTKLPRKTRRGVRKVSCIGAWHPARVQ 177

Query: 250 FTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRSVYLLSSLMGSF 301
           F V RAGQ GY  RTE NKKIY++G+   +  +A T  D +   ++  MG F
Sbjct: 178 FQVPRAGQKGYGQRTETNKKIYRIGRGD-DPRNASTSADLTEKTITP-MGGF 227


>gi|126649185|ref|XP_001388265.1| hypothetical protein [Cryptosporidium parvum Iowa II]
 gi|126117187|gb|EAZ51287.1| hypothetical protein cgd5_1580 [Cryptosporidium parvum Iowa II]
 gi|323508581|dbj|BAJ77184.1| cgd5_1580 [Cryptosporidium parvum]
 gi|323509637|dbj|BAJ77711.1| cgd5_1580 [Cryptosporidium parvum]
          Length = 305

 Score =  252 bits (643), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 122/232 (52%), Positives = 168/232 (72%), Gaps = 19/232 (8%)

Query: 84  LVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGK 143
           ++ VG VGY++TP GLR+L TV+A +L+EE +RRFYKN+ +SK+KAFTKY + Y  +   
Sbjct: 1   MICVGFVGYIETPNGLRALTTVFAGYLSEECKRRFYKNYYRSKRKAFTKYARNYAEN--- 57

Query: 144 KDIQAQLEKMKKYCTVIR--------------KKAHLMEIQVNGGSVAQKVDFAYGFFEK 189
           + ++A++ + K+YCTVIR              KKA +MEIQVNGG+V+ K+DF    FE+
Sbjct: 58  QRMEAEIARCKQYCTVIRALCHTQVSKTGLNKKKADIMEIQVNGGTVSDKIDFCVRCFEQ 117

Query: 190 QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 249
            IP+  +F ++EMIDIIG++KGKGY+GV++RWGVT+LPRKT RG+RKV+CIGAWHPARV 
Sbjct: 118 PIPVSTIFNENEMIDIIGISKGKGYKGVISRWGVTKLPRKTRRGVRKVSCIGAWHPARVQ 177

Query: 250 FTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRSVYLLSSLMGSF 301
           F V RAGQ GY  RTE NKKIY++G+   +  +A T  D +   ++  MG F
Sbjct: 178 FQVPRAGQKGYGQRTETNKKIYRIGRGD-DPRNASTSADLTEKTITP-MGGF 227


>gi|402869396|ref|XP_003898748.1| PREDICTED: 60S ribosomal protein L3-like [Papio anubis]
          Length = 327

 Score =  249 bits (635), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 114/155 (73%), Positives = 137/155 (88%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  TV+A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKK 155
           NW KSKKKAFTKY KK++ +DGKK ++     MKK
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKK 155


>gi|48257062|gb|AAH04323.2| RPL3 protein, partial [Homo sapiens]
          Length = 292

 Score =  248 bits (633), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 123/208 (59%), Positives = 154/208 (74%), Gaps = 20/208 (9%)

Query: 112 EEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------- 161
           +E +RRFYKNW KSKKKAFTKY KK++ +DGKK ++     MKKYC VIR          
Sbjct: 1   DECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLL 60

Query: 162 ----KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGV 217
               KKAHLMEIQVNGG+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV
Sbjct: 61  PLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGV 120

Query: 218 VTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK-- 275
            +RW   +LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+  
Sbjct: 121 TSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGY 180

Query: 276 ----ASQESHSAMTEFDRSVYLLSSLMG 299
                    ++A T++D S   ++ L G
Sbjct: 181 LIKDGKLIKNNASTDYDLSDKSINPLGG 208


>gi|326495464|dbj|BAJ85828.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 213

 Score =  247 bits (630), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 114/140 (81%), Positives = 127/140 (90%), Gaps = 1/140 (0%)

Query: 162 KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRW 221
           KKAHLMEIQ+NGG++A KVD+ Y FFEK++PIDAVFQKDEMIDIIGVTKGKGYEGVVTRW
Sbjct: 1   KKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRW 60

Query: 222 GVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESH 281
           GVTRLPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GK  QE+H
Sbjct: 61  GVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETH 120

Query: 282 SAMTEFDRSVYLLSSLMGSF 301
            A TEFDR+   ++  MG F
Sbjct: 121 DASTEFDRTEKDITP-MGGF 139


>gi|414587233|tpg|DAA37804.1| TPA: hypothetical protein ZEAMMB73_880497 [Zea mays]
          Length = 137

 Score =  246 bits (628), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 112/132 (84%), Positives = 124/132 (93%)

Query: 161 RKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTR 220
           +KKAHLMEIQVNGG++A KVD+ Y FFEK++P+DAVFQKDEMIDIIGVTKGKGYEGVVTR
Sbjct: 6   QKKAHLMEIQVNGGTIADKVDYGYKFFEKEVPVDAVFQKDEMIDIIGVTKGKGYEGVVTR 65

Query: 221 WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           WGVTRLPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GKA QE+
Sbjct: 66  WGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKAGQET 125

Query: 281 HSAMTEFDRSVY 292
           H A TEFDR  +
Sbjct: 126 HDASTEFDRYYF 137


>gi|293335791|ref|NP_001168481.1| uncharacterized protein LOC100382258 [Zea mays]
 gi|223948579|gb|ACN28373.1| unknown [Zea mays]
 gi|413919530|gb|AFW59462.1| hypothetical protein ZEAMMB73_132937 [Zea mays]
          Length = 253

 Score =  245 bits (625), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 120/164 (73%), Positives = 135/164 (82%), Gaps = 17/164 (10%)

Query: 153 MKKYCTVIR---------------KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVF 197
           ++KY +VIR               KKAHLMEIQVNGG++A KVD+ Y FFE ++P+DAVF
Sbjct: 18  LRKYASVIRVIAHTQIRKMKGLKQKKAHLMEIQVNGGTIADKVDYGYKFFE-EVPVDAVF 76

Query: 198 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQ 257
           QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS+TVARAGQ
Sbjct: 77  QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQ 136

Query: 258 NGYHHRTEMNKKIYKLGKASQESHSAMTEFDRSVYLLSSLMGSF 301
           NGYHHRTEMNKK+YK+GKA QESH A TEFDR+   ++  MG F
Sbjct: 137 NGYHHRTEMNKKVYKIGKAGQESHDASTEFDRTEKDITP-MGGF 179


>gi|6683575|dbj|BAA89259.1| ribosomal protein L3 [Bombyx mori]
          Length = 171

 Score =  244 bits (622), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 112/165 (67%), Positives = 140/165 (84%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP  LTAF+GYKAGMTH+VR+ 
Sbjct: 1   MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTIIETPP+V VGVVGY++TP GLR+L TVWA+H++E+ RRRFYK
Sbjct: 61  DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAH 165
           NW K KKKAFTK +KK++ + G+K I+   +KM +YC+V+R  AH
Sbjct: 121 NWYKCKKKAFTKASKKWQDELGRKSIEKDFKKMIRYCSVVRVIAH 165


>gi|13517923|gb|AAK29057.1|AF346004_1 L3 ribosomal protein, partial [Lolium perenne]
          Length = 220

 Score =  244 bits (622), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 113/141 (80%), Positives = 127/141 (90%), Gaps = 1/141 (0%)

Query: 161 RKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTR 220
           +KKAHLMEIQ+NGG++A KVD+ Y FFEK++PIDAVFQKDEMIDIIGVTKGKGYEGVVTR
Sbjct: 7   QKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTR 66

Query: 221 WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           WGVTRLPRKTHRGL KVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GK  QE+
Sbjct: 67  WGVTRLPRKTHRGLPKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQET 126

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           H A TEFDR+   ++  MG F
Sbjct: 127 HDASTEFDRTEKDITP-MGGF 146


>gi|324520529|gb|ADY47657.1| 60S ribosomal protein L3 [Ascaris suum]
          Length = 193

 Score =  242 bits (618), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 110/161 (68%), Positives = 136/161 (84%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           KF  PRHGS+GF P+KR+ RHRGKVKAFPKDDP+KP  LTAF+G+KAGMTHIVR+V+KPG
Sbjct: 10  KFSAPRHGSMGFTPKKRSRRHRGKVKAFPKDDPTKPIHLTAFIGFKAGMTHIVREVDKPG 69

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
           SK++KKE  EAVTI+ETPP+V+VG+VGY+ TPRG R   TVWA+HL+E+ RRRFYKNW  
Sbjct: 70  SKVNKKEVVEAVTILETPPMVIVGIVGYIDTPRGPRQFKTVWAEHLSEDCRRRFYKNWHT 129

Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAH 165
           SKKKAF K+ KK++ +DG+K I++ L KMKKYC+ IR  AH
Sbjct: 130 SKKKAFQKHAKKWQDEDGRKSIESDLNKMKKYCSKIRVIAH 170


>gi|188572405|gb|ACD65109.1| putative 60S ribosomal protein RPL3 [Novocrania anomala]
          Length = 191

 Score =  240 bits (612), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 124/191 (64%), Positives = 156/191 (81%), Gaps = 14/191 (7%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLP+KR+ RHRGK+KAFPKDDPSKP  +TAF+GYKAGM+HIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPKKRSKRHRGKIKAFPKDDPSKPVHMTAFIGYKAGMSHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK +KKE  EAVTI+E+PP++VVGVVGY++TPRGLR   T++A+HL+EE RRRFYK
Sbjct: 61  DRPGSKTNKKEVVEAVTIVESPPVIVVGVVGYIETPRGLRPFKTIFAEHLSEECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW K+KKKAFTKY KK++ +DGKKDI+    +M+KYC VIR              KKAH+
Sbjct: 121 NWYKAKKKAFTKYAKKWQDEDGKKDIEKDFAQMRKYCKVIRVVVHTQIKVLKKRQKKAHI 180

Query: 167 MEIQVNGGSVA 177
           +EI +NGG++A
Sbjct: 181 LEIPLNGGTIA 191


>gi|61740425|gb|AAX54475.1| ribosomal protein L3 [Lolium multiflorum]
          Length = 132

 Score =  236 bits (602), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 108/129 (83%), Positives = 118/129 (91%)

Query: 162 KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRW 221
           KKAHLMEIQVNGG++A KVD+ Y FFEK++PIDAVFQKDEMIDIIGVTKGKGY    TRW
Sbjct: 1   KKAHLMEIQVNGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYRRCRTRW 60

Query: 222 GVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESH 281
           GVTRLPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GK  QE+H
Sbjct: 61  GVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETH 120

Query: 282 SAMTEFDRS 290
            A TEFDR+
Sbjct: 121 DASTEFDRT 129


>gi|226480234|emb|CAX78781.1| ribosomal protein L3 [Schistosoma japonicum]
          Length = 215

 Score =  235 bits (599), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 117/193 (60%), Positives = 142/193 (73%), Gaps = 14/193 (7%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGF P+KR  R RGK KAFP+D  S P  LTAF+GYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFTPKKRCRRIRGKCKAFPRDRRSLPPHLTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK+HK+E  E VTI+E PP+V+VG+VGY  T +GLR+  TVWA+HL EE RRRFYK
Sbjct: 61  DRPGSKVHKREVVEPVTIMECPPMVIVGMVGYAPTAKGLRTFKTVWAEHLTEECRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           +WCKSKKKAFTK ++K+  + G   I   L+K+KKYCTV+R              KKAH+
Sbjct: 121 DWCKSKKKAFTKASRKWADEAGLALINRDLKKIKKYCTVVRAIAHTQMRLMKHRQKKAHI 180

Query: 167 MEIQVNGGSVAQK 179
           MEIQVN G   +K
Sbjct: 181 MEIQVNVGLFHKK 193


>gi|71416007|ref|XP_810050.1| ribosomal protein L13 [Trypanosoma cruzi strain CL Brener]
 gi|70874525|gb|EAN88199.1| ribosomal protein L13, putative [Trypanosoma cruzi]
          Length = 221

 Score =  233 bits (593), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 113/221 (51%), Positives = 153/221 (69%), Gaps = 17/221 (7%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSH KFEHPRHG LGFLPRKR+ + RG+V++FPKDDPS+   LT+F+ +KAGMTHIVRDV
Sbjct: 1   MSHCKFEHPRHGHLGFLPRKRSRQIRGRVRSFPKDDPSQKPHLTSFMVFKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  E VTI+E PP+VVVG+VGY +TP G +++ TVWA H + E RRRFYK
Sbjct: 61  DRPGSKVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKTIGTVWAHHTSVEFRRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR-----------------KK 163
           NW +S + AFTK  +   T +G+      L+   K   +IR                 KK
Sbjct: 121 NWKQSAQLAFTKRKQFARTTEGRLAEARTLKAFAKKADIIRVVAHTQLRKLRNNRVGVKK 180

Query: 164 AHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMID 204
           AH+ EIQ+NGG++A+K++ A    EK++ ID++FQ+ E  D
Sbjct: 181 AHVSEIQINGGTIAEKIELAKSLLEKEVRIDSIFQQSETCD 221


>gi|429963937|gb|ELA45935.1| hypothetical protein VCUG_02577 [Vavraia culicis 'floridensis']
          Length = 385

 Score =  227 bits (579), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 136/320 (42%), Positives = 186/320 (58%), Gaps = 25/320 (7%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MS RK+E PRHGSL + P++RA + R    A P+D P+    LT+FL YKAGMTHI+R  
Sbjct: 1   MSCRKYEAPRHGSLAYCPKRRAKQIRQPSPAPPRDCPTDKPHLTSFLAYKAGMTHILRIT 60

Query: 61  EKPG----SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRR 116
            +      ++  +KE  +AV+I+E P + V G+  Y K  RGL        ++++E +  
Sbjct: 61  TRKSNDKKAREIRKEVVDAVSILEAPEMRVYGIRLYAKGVRGLVLKEEYVTKNMSECLLA 120

Query: 117 RFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVI---------------R 161
           R  + + +S  K    +  K   ++   +I AQ EK      V+                
Sbjct: 121 RMVRRYHRSGLKK--NFKTKENAEENVNEIGAQFEKYYGTSGVVVKVLVHTKINMIKLDS 178

Query: 162 KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRW 221
           KKAH++E+QVNGG+V  KV +A   F K + I  VF + E+I I GVTKGKG+ GVV R+
Sbjct: 179 KKAHVLEVQVNGGTVEDKVQYALSIFNKDVKIGEVFDEQELISICGVTKGKGFTGVVKRF 238

Query: 222 GVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESH 281
           GV  LPRK+++G+RKVACIGAWHPA V  TVARAGQ G   RT MNKK+ K+G A Q   
Sbjct: 239 GVRILPRKSNKGIRKVACIGAWHPAGVLRTVARAGQMGSFKRTLMNKKVLKIGNAMQ--- 295

Query: 282 SAMTEFDRSVYLLSSLMGSF 301
           S  TEFD +   ++  MG F
Sbjct: 296 SVQTEFDLTNKTINP-MGGF 314


>gi|326574320|gb|ADZ95675.1| 60S ribosomal protein L3 [Nosema bombycis]
          Length = 664

 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 132/313 (42%), Positives = 180/313 (57%), Gaps = 58/313 (18%)

Query: 4   RKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD-VEK 62
           RKF  PRHGSL F PRKR+   +  ++AFPKD   +   LTAF+GYKAGMTH++R  + +
Sbjct: 176 RKFNAPRHGSLAFGPRKRSKTIKPSIRAFPKDVQEEKIHLTAFIGYKAGMTHVIRSKIIQ 235

Query: 63  PGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRR-FYKN 121
             +K   KE  +AVT+IETPP+V+ GV GY  T +GL  + TV A H++E VRRR F K 
Sbjct: 236 TKNKQLSKEIMDAVTLIETPPMVIYGVTGYEVTGKGLNRIATVLAPHIDESVRRREFGKR 295

Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---------------KKAHL 166
           W     +  +   K+Y  +  +KD    LE+++K  +VIR               KK+H+
Sbjct: 296 W-----EQLSANIKEYNKEKAEKD----LEEIRKRASVIRILAHTQPTKIPALHLKKSHI 346

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            EIQVNGG++ +KVD+A   FEK++ ID VF+ +E +D IG                   
Sbjct: 347 SEIQVNGGTINEKVDWALDKFEKEVTIDEVFEVNENLDTIG------------------- 387

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 286
                     VACIGAWHP+RV  TVARAGQ G+H RTE NKK+Y +G  ++      TE
Sbjct: 388 ----------VACIGAWHPSRVMTTVARAGQMGFHRRTETNKKVYMIGNGNE---LIKTE 434

Query: 287 FDRSVYLLSSLMG 299
           FD +   ++ L G
Sbjct: 435 FDLTEKPITPLGG 447


>gi|355749943|gb|EHH54281.1| hypothetical protein EGM_15087 [Macaca fascicularis]
          Length = 201

 Score =  223 bits (569), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 114/197 (57%), Positives = 147/197 (74%), Gaps = 15/197 (7%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           M+HRKF  PRHGSL FL +K +S+H GKVK+FPKDDPSK   LTAFLGYKAGMT IV++V
Sbjct: 1   MAHRKFSAPRHGSLSFLTQKHSSKHHGKVKSFPKDDPSKLVHLTAFLGYKAGMTKIVQEV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VV+G+VGYV+TP GL++   V A+H+++  +R FYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVMGIVGYVQTPPGLQTFKIVLAEHISDASKRHFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           NW KS +KAFTKY KK + +DGKK ++     MKKY  VIR               KAHL
Sbjct: 121 NWHKS-EKAFTKYCKKCQDEDGKKHLEKDFGSMKKYRQVIRGIAYTQMCLLPLCQNKAHL 179

Query: 167 MEIQVNGGSVAQKVDFA 183
           MEIQV  G++A+K+D+A
Sbjct: 180 MEIQVKVGTMARKLDWA 196


>gi|379072556|gb|AFC92910.1| ribosomal protein L3, partial [Hymenochirus curtipes]
          Length = 256

 Score =  222 bits (565), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 111/194 (57%), Positives = 141/194 (72%), Gaps = 20/194 (10%)

Query: 126 KKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLMEIQV 171
           KKKAFTKY KK++ ++GKK ++  +  MKKYC VIR              KK+HLMEIQV
Sbjct: 1   KKKAFTKYCKKWQDEEGKKQLEKDIASMKKYCQVIRVIAHTQMRLLPLRQKKSHLMEIQV 60

Query: 172 NGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 231
           NGG++A+KVD+A    E+Q+ I  VF +DEMID+IGVTKGKGY+GV +RW   +LPRKTH
Sbjct: 61  NGGTIAEKVDWAREKLEQQVAIAGVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTH 120

Query: 232 RGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------SHSAMT 285
           RGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           ++A T
Sbjct: 121 RGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYHSKDGKLVKNNAST 180

Query: 286 EFDRSVYLLSSLMG 299
           ++D S   ++ L G
Sbjct: 181 DYDLSDKSINPLGG 194


>gi|379072554|gb|AFC92909.1| ribosomal protein L3, partial [Rhinophrynus dorsalis]
          Length = 256

 Score =  220 bits (560), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 111/194 (57%), Positives = 139/194 (71%), Gaps = 20/194 (10%)

Query: 126 KKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLMEIQV 171
           KKKAFTKY KK++ D+GKK ++     MKKYC VIR              KK+HLMEIQV
Sbjct: 1   KKKAFTKYCKKWQDDEGKKQLEKDFASMKKYCQVIRVIAHTQMRLLPLRQKKSHLMEIQV 60

Query: 172 NGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 231
           NGG+VA+KVD+A    E+Q+ +  VF +DEMID+IGVTKGKG +GV +RW   +LPRKTH
Sbjct: 61  NGGTVAEKVDWAREKLEQQVAVSGVFGQDEMIDVIGVTKGKGNKGVTSRWHTKKLPRKTH 120

Query: 232 RGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------SHSAMT 285
           RGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           ++A T
Sbjct: 121 RGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYHSKDGKLVKNNAST 180

Query: 286 EFDRSVYLLSSLMG 299
           ++D S   ++ L G
Sbjct: 181 DYDLSDKSINPLGG 194


>gi|209732596|gb|ACI67167.1| 60S ribosomal protein L3 [Salmo salar]
          Length = 251

 Score =  219 bits (559), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 110/146 (75%), Positives = 132/146 (90%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+ RHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSRRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VVVGVVGYV+TPRGLRS  T++A+H+++E +RRFY+
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGVVGYVETPRGLRSFKTIFAEHISDECKRRFYR 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDI 146
           NW KSKKKAFTKY KK++ D+GKK +
Sbjct: 121 NWYKSKKKAFTKYCKKWQDDEGKKQL 146


>gi|70909599|emb|CAJ17225.1| ribosomal protein L3e [Mycetophagus quadripustulatus]
          Length = 283

 Score =  218 bits (554), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 114/197 (57%), Positives = 142/197 (72%), Gaps = 21/197 (10%)

Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLMEIQ 170
           SKKKAFTK +KK+  D GKK I+   +K+ KYC V+R              KKAH+MEIQ
Sbjct: 1   SKKKAFTKSSKKWSDDLGKKSIERDFKKIVKYCKVVRVIAHTQMKLLKQRQKKAHIMEIQ 60

Query: 171 VNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 230
           +NGGS+A KV +A    EK IPI+ VF +DEMID IGVTKGKGY+GV +RW   +LPRKT
Sbjct: 61  LNGGSIADKVQWAREHLEKPIPINQVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKLPRKT 120

Query: 231 HRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA--SQES----HSAM 284
           H+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G    S+++    ++A 
Sbjct: 121 HKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGAGIHSKDNKVIKNNAS 180

Query: 285 TEFDRSVYLLSSLMGSF 301
           TE+D +   ++  MG F
Sbjct: 181 TEYDLTEKTITP-MGGF 196


>gi|294866225|ref|XP_002764639.1| 60S ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
 gi|239864270|gb|EEQ97356.1| 60S ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
          Length = 182

 Score =  218 bits (554), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 100/128 (78%), Positives = 113/128 (88%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSLGFLPRKR   H+GKVK+FPKDD SKPC LTAF+GYKAGMTHIVRDV
Sbjct: 1   MSHRKFEVPRHGSLGFLPRKRTRHHKGKVKSFPKDDQSKPCHLTAFMGYKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           +KPGSKLH+KE  EAVT++E PP+V VG VGYV+TP GLR+L TVWA+HL++EVRRRFYK
Sbjct: 61  DKPGSKLHRKEVVEAVTVLEAPPMVCVGFVGYVETPNGLRALTTVWAKHLSDEVRRRFYK 120

Query: 121 NWCKSKKK 128
           NW  SKKK
Sbjct: 121 NWYHSKKK 128


>gi|269859601|ref|XP_002649525.1| 60S ribosomal protein L3 [Enterocytozoon bieneusi H348]
 gi|220067076|gb|EED44544.1| LSU ribosomal protein L3P [Enterocytozoon bieneusi H348]
          Length = 329

 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 115/257 (44%), Positives = 167/257 (64%), Gaps = 12/257 (4%)

Query: 53  MTHIVRDVE-KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLN 111
           MTH++R  E +  +K+  KE  +AVTIIETPP+VV GVVGY  T +GL   C + A++L+
Sbjct: 1   MTHVIRTKEVRAKNKIQTKEILDAVTIIETPPIVVHGVVGYKNTVKGLERTCIILARNLS 60

Query: 112 EEV-RRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQL------EKMKKYCTVIRKKA 164
           E+V RR F K +    K    +   +Y  DD  +  ++++       +++   ++ +KK+
Sbjct: 61  EDVIRRMFKKAYIPGIKYEDLRKNVEYTEDDVNELRKSEIIRLICNSQVRAIKSIKQKKS 120

Query: 165 HLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 224
           H+MEIQV GGS+  KV +     EK+I ++ VF K E +D IGVTKGKG++GVV RWG T
Sbjct: 121 HIMEIQVGGGSIDDKVSYGISHLEKEIKVNNVFSKSEFLDTIGVTKGKGFQGVVKRWGTT 180

Query: 225 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAM 284
            LPRKT++G+RKVACIGA+HP+RV ++VARAGQ G+H RT+ N  +Y +G   Q      
Sbjct: 181 ILPRKTNKGIRKVACIGAFHPSRVMYSVARAGQVGFHRRTQQNLLVYDIGNGKQ---PIQ 237

Query: 285 TEFDRSVYLLSSLMGSF 301
           T+FD +V  ++  MG F
Sbjct: 238 TDFDLTVKTINP-MGGF 253


>gi|71984550|ref|NP_001021256.1| Protein RPL-3, isoform d [Caenorhabditis elegans]
 gi|51011805|emb|CAH10798.1| Protein RPL-3, isoform d [Caenorhabditis elegans]
          Length = 303

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 106/191 (55%), Positives = 139/191 (72%), Gaps = 18/191 (9%)

Query: 128 KAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLMEIQVNG 173
           KAFTKY KK++ +DGKK I+A   K+KKYC+ IR              KKAHL+EIQVNG
Sbjct: 30  KAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNG 89

Query: 174 GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 233
           G++ QKVD+A    EKQ+ +D VF +DEMID IGVT+G G++GV +RW   +LPRKTH+G
Sbjct: 90  GTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 149

Query: 234 LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAS---QESHSAMTEFDRS 290
           LRKVACIGAWHP+RV+FTVARAGQ G+HHRT +N KIY++GK++   +  ++  TEFD +
Sbjct: 150 LRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNNGSTEFDLT 209

Query: 291 VYLLSSLMGSF 301
              ++  MG F
Sbjct: 210 QKTITP-MGGF 219



 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/34 (61%), Positives = 27/34 (79%)

Query: 1  MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPK 34
          MSHRKF  PRHG +GF P+KR+  +RG++KAF K
Sbjct: 1  MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34


>gi|440493542|gb|ELQ75998.1| 60S ribosomal protein L3 [Trachipleistophora hominis]
          Length = 384

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 133/318 (41%), Positives = 184/318 (57%), Gaps = 25/318 (7%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MS RK+E PRHGSL + P+KRA + R    A P D+P+    LT+FL YKAGMTHI+R  
Sbjct: 1   MSCRKYEAPRHGSLAYCPKKRAKQIRQPAAAAPPDNPADKPHLTSFLAYKAGMTHILRIT 60

Query: 61  EKPG----SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRR 116
            +      ++  +KE  +AV+++E P + V G+  Y +  RGL        ++ +E +  
Sbjct: 61  TRKSNDKKAREIRKEVVDAVSVLEAPAMRVYGIRVYTRGVRGLVLADEYVTKNKSECLLA 120

Query: 117 RFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVI---------------R 161
           R  + + +S   A  K   +    +   D++A+ EK      V+                
Sbjct: 121 RMVRRYHRS---ALKKNAGRENVQEDLNDVRARFEKYCATSNVLVKVLMHTKIETLKLDS 177

Query: 162 KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRW 221
           KKAH++E+QVNGGSVA KV +A       I I  VF + E+I I GVTKGKG+ GVV R+
Sbjct: 178 KKAHVLEVQVNGGSVADKVQYALSVLNTDISIGEVFNEQELISICGVTKGKGFTGVVKRF 237

Query: 222 GVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESH 281
           GV  LPRK+++G+RKVACIGAWHPA V  TVARAGQ G   RT +NKK+ K+G A+Q   
Sbjct: 238 GVRILPRKSNKGIRKVACIGAWHPAGVLRTVARAGQMGCFKRTLINKKVLKIGNATQ--- 294

Query: 282 SAMTEFDRSVYLLSSLMG 299
           S  TEFD +   ++ L G
Sbjct: 295 SVQTEFDLTDKTINPLGG 312


>gi|379072552|gb|AFC92908.1| ribosomal protein L3, partial [Pipa carvalhoi]
          Length = 255

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 112/194 (57%), Positives = 139/194 (71%), Gaps = 21/194 (10%)

Query: 126 KKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLMEIQV 171
           KKKAFTKY KK + ++GKK ++     MKKYC VIR              KK+HLMEIQV
Sbjct: 1   KKKAFTKYCKK-QDEEGKKQLEKDFASMKKYCQVIRVIAHTQMRLLPLRQKKSHLMEIQV 59

Query: 172 NGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 231
           NGG+VA+KVD+A    E+Q+ I  VF +DEMID+IGVTKGKGY+GV +RW   +LPRKTH
Sbjct: 60  NGGTVAEKVDWAREKLEQQVLIGGVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTH 119

Query: 232 RGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------SHSAMT 285
           RGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+           ++A T
Sbjct: 120 RGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYHSKDGKLVKNNAST 179

Query: 286 EFDRSVYLLSSLMG 299
           ++D S   ++ L G
Sbjct: 180 DYDLSDKSINPLGG 193


>gi|326437340|gb|EGD82910.1| ribosomal protein L3 isoform a [Salpingoeca sp. ATCC 50818]
          Length = 235

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 112/195 (57%), Positives = 146/195 (74%), Gaps = 14/195 (7%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLP+KR   HRG+V++FP+D+      LTAF+GYKAGMTHIVR++
Sbjct: 1   MSHRKFRAPRHGSLGFLPKKRTKHHRGRVRSFPRDNKEDKPHLTAFIGYKAGMTHIVREM 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++ GSK HKKE  EAVT++ETPP+V VG+VGYV+TPRGLR L TV+A +++E   RRFYK
Sbjct: 61  DRTGSKAHKKEVVEAVTVVETPPMVGVGIVGYVETPRGLRQLTTVFAGNMSETCMRRFYK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHL 166
           N+ KSKKK F+KY  + +T++GKK+ + QL ++ KYCTVIR              K+AH+
Sbjct: 121 NYVKSKKKQFSKYFARLKTEEGKKNFEDQLRRLAKYCTVIRVIAHTKIDVLNLRQKRAHI 180

Query: 167 MEIQVNGGSVAQKVD 181
           MEIQVNGG+   + D
Sbjct: 181 MEIQVNGGTPRGETD 195


>gi|339247731|ref|XP_003375499.1| putative ribosomal protein L3 [Trichinella spiralis]
 gi|316971139|gb|EFV54965.1| putative ribosomal protein L3 [Trichinella spiralis]
          Length = 180

 Score =  214 bits (544), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 101/167 (60%), Positives = 135/167 (80%), Gaps = 7/167 (4%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           +SHRKF  PRHG +GFLP+KR+ RHRGKVK+FPKDDP KP  LTAF+GYKAGMTHIVR+V
Sbjct: 17  VSHRKFSAPRHGHVGFLPKKRSKRHRGKVKSFPKDDPQKPVHLTAFIGYKAGMTHIVREV 76

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVG--VVGYVKTPRGLRSLCTVWAQHLNEEVRRRF 118
           +KPGSK++KK+  EAVT++ETPP+V+VG  VVGY++TP+GLR+  T+WA+HL+++ +RR+
Sbjct: 77  DKPGSKINKKDVVEAVTVLETPPMVIVGKCVVGYIETPQGLRAFKTIWAEHLSDDCKRRY 136

Query: 119 YKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAH 165
                K ++KAFTK +KK++ + G K+IQ    +M KYC VIR  AH
Sbjct: 137 -----KCERKAFTKASKKWQDEAGVKEIQTDFARMIKYCKVIRVIAH 178


>gi|432102534|gb|ELK30105.1| 60S ribosomal protein L3-like protein [Myotis davidii]
          Length = 271

 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 112/173 (64%), Positives = 131/173 (75%)

Query: 2   SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
           SHRKF  PRHG LGFLP KR+ RHRGKVK +P+DDPS+P  LTAFLGYKAGMTH +R+V 
Sbjct: 45  SHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSRPVHLTAFLGYKAGMTHTLREVH 104

Query: 62  KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
           +PG K+ K+E  EAVTI+ETPPLVVVGVVGYV TPRGLRS  T++A+HL++E RRRFYK+
Sbjct: 105 RPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYKD 164

Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGG 174
           W KSKKKAFTK  K++   DGKK +Q     MKKYC VIR   H     V   
Sbjct: 165 WHKSKKKAFTKACKRWRDADGKKQLQKDFAAMKKYCKVIRVIVHTQVSPVTSA 217


>gi|134035929|gb|ABO47804.1| ribosomal protein L3 [Omphisa fuscidentalis]
          Length = 135

 Score =  210 bits (535), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 95/134 (70%), Positives = 118/134 (88%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP  LTAF+GYKAGMTH+VR+ ++PGSK++
Sbjct: 2   PRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKIN 61

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
           KKE  EAVTIIETPP+V VGVVGY++TP GLR+L T+WA+H++E+ RRRFYKNW K KKK
Sbjct: 62  KKEIVEAVTIIETPPMVAVGVVGYIETPHGLRALLTIWAEHMSEDCRRRFYKNWYKCKKK 121

Query: 129 AFTKYTKKYETDDG 142
           AFTK +KK++ + G
Sbjct: 122 AFTKASKKWQDELG 135


>gi|119580724|gb|EAW60320.1| ribosomal protein L3, isoform CRA_i [Homo sapiens]
 gi|194387408|dbj|BAG60068.1| unnamed protein product [Homo sapiens]
          Length = 122

 Score =  210 bits (534), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 95/122 (77%), Positives = 113/122 (92%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP+VVVG+VGYV+TPRGLR+  TV+A+H+++E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NW 122
           NW
Sbjct: 121 NW 122


>gi|226475922|emb|CAX72051.1| ribosomal protein L3 [Schistosoma japonicum]
          Length = 328

 Score =  210 bits (534), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 108/204 (52%), Positives = 139/204 (68%), Gaps = 18/204 (8%)

Query: 118 FYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KK 163
           F K     KKKAFTK ++K+  + G   I   L+K+KKYCTV+R              KK
Sbjct: 27  FIKIGANPKKKAFTKASRKWADEAGLALINRDLKKIKKYCTVVRAIAHTQMRLMKHRQKK 86

Query: 164 AHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 223
           AH+MEIQVNGG+++QKVD+    FEKQIP+  VF +DEMID+IGVTKGKG++GV +RW  
Sbjct: 87  AHIMEIQVNGGTISQKVDWIRQHFEKQIPVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHT 146

Query: 224 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE---- 279
            +LPRKTH+GLRKVACIGAWHPARV+ +VARAGQ GY HRTE+NKKIY++G   Q     
Sbjct: 147 KKLPRKTHKGLRKVACIGAWHPARVARSVARAGQKGYFHRTELNKKIYRIGMGLQAQLEV 206

Query: 280 SHSAMTEFDRSVYLLSSLMGSFSS 303
           + +   + DR   +L    G+ S+
Sbjct: 207 AKAEAAKDDRDKNVLPKPKGNAST 230


>gi|226480246|emb|CAX78787.1| ribosomal protein L3 [Schistosoma japonicum]
 gi|226480248|emb|CAX78788.1| ribosomal protein L3 [Schistosoma japonicum]
          Length = 328

 Score =  210 bits (534), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 108/204 (52%), Positives = 139/204 (68%), Gaps = 18/204 (8%)

Query: 118 FYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KK 163
           F K     KKKAFTK ++K+  + G   I   L+K+KKYCTV+R              KK
Sbjct: 27  FIKIGANPKKKAFTKASRKWADEAGLALINRDLKKIKKYCTVVRAIAHTQMRLMKHRQKK 86

Query: 164 AHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 223
           AH+MEIQVNGG+++QKVD+    FEKQIP+  VF +DEMID+IGVTKGKG++GV +RW  
Sbjct: 87  AHIMEIQVNGGTISQKVDWIRQHFEKQIPVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHT 146

Query: 224 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE---- 279
            +LPRKTH+GLRKVACIGAWHPARV+ +VARAGQ GY HRTE+NKKIY++G   Q     
Sbjct: 147 KKLPRKTHKGLRKVACIGAWHPARVARSVARAGQKGYFHRTELNKKIYRIGMGLQAQLEV 206

Query: 280 SHSAMTEFDRSVYLLSSLMGSFSS 303
           + +   + DR   +L    G+ S+
Sbjct: 207 AKAEAAKDDRDKNVLPKPKGNAST 230


>gi|226480230|emb|CAX78779.1| ribosomal protein L3 [Schistosoma japonicum]
          Length = 329

 Score =  208 bits (529), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 106/196 (54%), Positives = 137/196 (69%), Gaps = 18/196 (9%)

Query: 126 KKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLMEIQV 171
           KKKAFTK ++K+  + G   I   L+K+KKYCTV+R              KKAH+MEIQV
Sbjct: 36  KKKAFTKASRKWADEAGLALINRDLKKIKKYCTVVRAIAHTQMRLMKHRQKKAHIMEIQV 95

Query: 172 NGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 231
           NGG+++QKVD+    FEKQIP+  VF +DEMID+IGVTKGKG++GV +RW   +LPRKTH
Sbjct: 96  NGGTISQKVDWIRQHFEKQIPVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLPRKTH 155

Query: 232 RGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE----SHSAMTEF 287
           +GLRKVACIGAWHPARV+ +VARAGQ GY HRTE+NKKIY++G   Q     + +   + 
Sbjct: 156 KGLRKVACIGAWHPARVARSVARAGQKGYFHRTELNKKIYRIGMGLQAQLEVAKAEAAKD 215

Query: 288 DRSVYLLSSLMGSFSS 303
           DR   +L    G+ S+
Sbjct: 216 DRDKNVLPKPKGNAST 231


>gi|225706934|gb|ACO09313.1| 60S ribosomal protein L3 [Osmerus mordax]
          Length = 143

 Score =  207 bits (527), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 94/131 (71%), Positives = 115/131 (87%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGSLGFLPRKR+ RHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSRRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVTI+ETPP++VVGVVGYV+TPRGLRS  T++A+H+++E +RRFY+
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMIVVGVVGYVETPRGLRSFKTIFAEHVSDECKRRFYR 120

Query: 121 NWCKSKKKAFT 131
           N     ++A T
Sbjct: 121 NCSSQAQRALT 131


>gi|355709847|gb|EHH31311.1| 60S ribosomal protein L3-like protein, partial [Macaca mulatta]
          Length = 284

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 103/195 (52%), Positives = 134/195 (68%), Gaps = 19/195 (9%)

Query: 124 KSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR-------------KKAHLMEIQ 170
           KSKKKAFTK  K++   DGKK +Q     MKKYC VIR             KKAH+MEIQ
Sbjct: 2   KSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHQMKLLPFRQKKAHIMEIQ 61

Query: 171 VNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 230
           +NGG+VA+KV +A    EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW   +LPRKT
Sbjct: 62  LNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLPRKT 121

Query: 231 HRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------HSAM 284
           H+GLRKVACIGAWHPARV  ++ARAGQ GYHHRTE+NKKIY++G+           ++A 
Sbjct: 122 HKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHMEDGKLVKNNAS 181

Query: 285 TEFDRSVYLLSSLMG 299
           T +D +   ++ L G
Sbjct: 182 TSYDVTAKSITPLGG 196


>gi|376337862|gb|AFB33487.1| hypothetical protein 2_6618_01, partial [Abies alba]
 gi|376337864|gb|AFB33488.1| hypothetical protein 2_6618_01, partial [Abies alba]
 gi|376337866|gb|AFB33489.1| hypothetical protein 2_6618_01, partial [Abies alba]
          Length = 141

 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 97/112 (86%), Positives = 105/112 (93%), Gaps = 1/112 (0%)

Query: 190 QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 249
           Q+PIDA+FQKDEMID+IGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS
Sbjct: 1   QVPIDALFQKDEMIDVIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 60

Query: 250 FTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRSVYLLSSLMGSF 301
           FTVARAGQNGYHHRTEMNKKIYK+GKA QESH+AMTEFDR+   ++  MG F
Sbjct: 61  FTVARAGQNGYHHRTEMNKKIYKIGKAGQESHNAMTEFDRTEKDITP-MGGF 111


>gi|376337876|gb|AFB33494.1| hypothetical protein 2_6618_01, partial [Pinus cembra]
          Length = 141

 Score =  204 bits (520), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 96/112 (85%), Positives = 105/112 (93%), Gaps = 1/112 (0%)

Query: 190 QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 249
           Q+PIDA+FQKDEMID+IGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS
Sbjct: 1   QVPIDALFQKDEMIDVIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 60

Query: 250 FTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRSVYLLSSLMGSF 301
           FTVARAGQNGYHHRTEMNKKIYK+GK+ QESH+AMTEFDR+   ++  MG F
Sbjct: 61  FTVARAGQNGYHHRTEMNKKIYKIGKSDQESHNAMTEFDRTEKDITP-MGGF 111


>gi|161899261|ref|XP_001712857.1| ribosomal protein L3 [Bigelowiella natans]
 gi|75756351|gb|ABA27245.1| ribosomal protein L3 [Bigelowiella natans]
          Length = 370

 Score =  204 bits (519), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 122/307 (39%), Positives = 173/307 (56%), Gaps = 17/307 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPR GSLGFLP+KR++R     K + +        ++ F   K   TH++R  
Sbjct: 1   MSHRKFEHPRIGSLGFLPKKRSNRIFPSSKTYKEIIHIYYPYISQFASLKVASTHVLRIC 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQH-LNEEVRRRFY 119
               SK ++    + VT++E PP+ VVG+  Y  +   L  L T+  Q  LN +  +   
Sbjct: 61  NIVSSKSYQNPIIDEVTLMECPPIEVVGLCAYALSSGHLVKLKTIKLQRGLNLDQSKDI- 119

Query: 120 KNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR-----KKAHLMEIQVNGG 174
                   + FT +T   +       I   L      CT I+     KK +  E  + GG
Sbjct: 120 ----SFDSQFFTNFTYSLQFIIKHSVIFRFL-----CCTFIKTNSMIKKKYFFETDIIGG 170

Query: 175 SVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL 234
           S   K++F      K+I I+++F ++++ID IG+TKG G +GVV+RWG+TRLPRKTHRGL
Sbjct: 171 SPKMKLEFWLKLNNKKIYINSIFHENDIIDAIGITKGHGTKGVVSRWGITRLPRKTHRGL 230

Query: 235 RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRSVYLL 294
           RKVACIG W P+RV++T++RAGQ GYH RT  NKKIYK+G     S+ + +  D S+   
Sbjct: 231 RKVACIGPWTPSRVAWTISRAGQKGYHKRTLFNKKIYKIGSEENFSYYSNSLSD-SIVKS 289

Query: 295 SSLMGSF 301
            + MG F
Sbjct: 290 VNCMGGF 296


>gi|361068061|gb|AEW08342.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
 gi|376337878|gb|AFB33495.1| hypothetical protein 2_6618_01, partial [Pinus mugo]
 gi|376337880|gb|AFB33496.1| hypothetical protein 2_6618_01, partial [Pinus mugo]
 gi|376337882|gb|AFB33497.1| hypothetical protein 2_6618_01, partial [Pinus mugo]
 gi|383162934|gb|AFG64168.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
 gi|383162936|gb|AFG64169.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
 gi|383162938|gb|AFG64170.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
 gi|383162940|gb|AFG64171.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
 gi|383162942|gb|AFG64172.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
 gi|383162944|gb|AFG64173.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
 gi|383162946|gb|AFG64174.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
 gi|383162948|gb|AFG64175.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
 gi|383162950|gb|AFG64176.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
 gi|383162952|gb|AFG64177.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
 gi|383162954|gb|AFG64178.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
 gi|383162956|gb|AFG64179.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
 gi|383162958|gb|AFG64180.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
 gi|383162960|gb|AFG64181.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
 gi|383162962|gb|AFG64182.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
          Length = 141

 Score =  204 bits (518), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 96/112 (85%), Positives = 104/112 (92%), Gaps = 1/112 (0%)

Query: 190 QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 249
           Q+PIDA+FQKDEMID+IGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS
Sbjct: 1   QVPIDALFQKDEMIDVIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 60

Query: 250 FTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRSVYLLSSLMGSF 301
           FTVARAGQNGYHHRTEMNKKIYK+GK+ QESH AMTEFDR+   ++  MG F
Sbjct: 61  FTVARAGQNGYHHRTEMNKKIYKIGKSDQESHKAMTEFDRTEKDITP-MGGF 111


>gi|256000845|gb|ACU51763.1| RE52161p [Drosophila melanogaster]
          Length = 316

 Score =  204 bits (518), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 108/198 (54%), Positives = 134/198 (67%), Gaps = 21/198 (10%)

Query: 124 KSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLMEI 169
           KSKKKAFTK +KK+  D GKK I+    KM +YC VIR              KKAH+MEI
Sbjct: 24  KSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEI 83

Query: 170 QVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 229
           Q+NGGS+  KV +A    EK I +  VF +DEMID +GVTKGKG++GV +RW   +LPRK
Sbjct: 84  QLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRK 143

Query: 230 THRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------SHSA 283
           TH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKKIY++G            ++A
Sbjct: 144 THKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNA 203

Query: 284 MTEFDRSVYLLSSLMGSF 301
            TE+D +   ++  MG F
Sbjct: 204 STEYDLTDKSITP-MGGF 220


>gi|306922439|gb|ADN07433.1| RE73632p [Drosophila melanogaster]
          Length = 208

 Score =  203 bits (516), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 101/165 (61%), Positives = 121/165 (73%), Gaps = 14/165 (8%)

Query: 124 KSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLMEI 169
           KSKKKAFTK +KK+  D GKK I+    KM +YC VIR              KKAH+MEI
Sbjct: 24  KSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEI 83

Query: 170 QVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 229
           Q+NGGS+  KV +A    EK I +  VF +DEMID +GVTKGKG++GV +RW   +LPRK
Sbjct: 84  QLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRK 143

Query: 230 THRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLG 274
           TH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKKIY++G
Sbjct: 144 THKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIG 188


>gi|376337868|gb|AFB33490.1| hypothetical protein 2_6618_01, partial [Larix decidua]
 gi|376337870|gb|AFB33491.1| hypothetical protein 2_6618_01, partial [Larix decidua]
 gi|376337872|gb|AFB33492.1| hypothetical protein 2_6618_01, partial [Larix decidua]
 gi|376337874|gb|AFB33493.1| hypothetical protein 2_6618_01, partial [Larix decidua]
          Length = 141

 Score =  201 bits (511), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 95/112 (84%), Positives = 103/112 (91%), Gaps = 1/112 (0%)

Query: 190 QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 249
           Q+PIDA+FQKDEMID+IGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS
Sbjct: 1   QVPIDALFQKDEMIDVIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 60

Query: 250 FTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRSVYLLSSLMGSF 301
           FTVARAGQNGYHHRTEMNKKIYK+GK  +ESH AMTEFDR+   ++  MG F
Sbjct: 61  FTVARAGQNGYHHRTEMNKKIYKIGKIDEESHKAMTEFDRTEKDITP-MGGF 111


>gi|414587225|tpg|DAA37796.1| TPA: hypothetical protein ZEAMMB73_342493 [Zea mays]
          Length = 239

 Score =  201 bits (511), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 93/109 (85%), Positives = 101/109 (92%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFEHPRHGSLGFLPRKR+SRHRGKVK+FP+DDP KPC LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPRDDPKKPCHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQH 109
           EKPGSKLHKKETCEAVTIIETPPLV+VG+V YVKTPRGLR +  + A H
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRKVACIGAWH 109



 Score =  118 bits (296), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 56/73 (76%), Positives = 63/73 (86%), Gaps = 1/73 (1%)

Query: 229 KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFD 288
           KT RGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GKA QE+H A TEFD
Sbjct: 94  KTPRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKAGQETHDASTEFD 153

Query: 289 RSVYLLSSLMGSF 301
           R+   ++  MG F
Sbjct: 154 RTEKDITP-MGGF 165


>gi|56462226|gb|AAV91396.1| ribosomal protein 24 [Lonomia obliqua]
          Length = 280

 Score =  201 bits (510), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 102/188 (54%), Positives = 130/188 (69%), Gaps = 21/188 (11%)

Query: 134 TKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLMEIQVNGGSVAQK 179
           +KK++ + G+K I+   +KM +YC+VIR              KKAH+MEIQ+NGG +  K
Sbjct: 1   SKKWQDELGRKSIEKDFKKMIRYCSVIRIIAHTQMKLLKQRQKKAHIMEIQINGGKIEDK 60

Query: 180 VDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVAC 239
           V++A    E Q P+  VF +DEMID IGVTKGKGY+GV +RW   +LPRKTH+GLRKVAC
Sbjct: 61  VNWAREHLENQFPLTRVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKLPRKTHKGLRKVAC 120

Query: 240 IGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------SHSAMTEFDRSVYL 293
           IGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY+LG+           ++A TE+D S   
Sbjct: 121 IGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRLGQGIHTKDGKVIKNNASTEYDFSEKS 180

Query: 294 LSSLMGSF 301
           ++  MG F
Sbjct: 181 ITP-MGGF 187


>gi|24645875|ref|NP_731547.1| ribosomal protein L3, isoform D [Drosophila melanogaster]
 gi|23170972|gb|AAF54612.2| ribosomal protein L3, isoform D [Drosophila melanogaster]
          Length = 161

 Score =  200 bits (508), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 89/126 (70%), Positives = 108/126 (85%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+ F P+KR++RHRGKVKAFPKDD SKP  LT F+GYKAGMTHIVR+ 
Sbjct: 1   MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVT++ETPP++VVG VGY++TP GLR+L  VWAQHL+EE RRRFYK
Sbjct: 61  DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120

Query: 121 NWCKSK 126
           NW  S+
Sbjct: 121 NWYVSE 126


>gi|71296875|gb|AAH36582.1| RPL3 protein [Homo sapiens]
 gi|119580715|gb|EAW60311.1| ribosomal protein L3, isoform CRA_b [Homo sapiens]
 gi|119580721|gb|EAW60317.1| ribosomal protein L3, isoform CRA_b [Homo sapiens]
          Length = 251

 Score =  198 bits (504), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 99/167 (59%), Positives = 123/167 (73%), Gaps = 20/167 (11%)

Query: 153 MKKYCTVIR--------------KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQ 198
           MKKYC VIR              KKAHLMEIQVNGG+VA+K+D+A    E+Q+P++ VF 
Sbjct: 1   MKKYCQVIRVIAHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFG 60

Query: 199 KDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQN 258
           +DEMID+IGVTKGKGY+GV +RW   +LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ 
Sbjct: 61  QDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQK 120

Query: 259 GYHHRTEMNKKIYKLGK------ASQESHSAMTEFDRSVYLLSSLMG 299
           GYHHRTE+NKKIYK+G+           ++A T++D S   ++ L G
Sbjct: 121 GYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGG 167


>gi|55391486|gb|AAH85243.1| Rpl3l protein, partial [Mus musculus]
          Length = 281

 Score =  198 bits (503), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 96/178 (53%), Positives = 122/178 (68%), Gaps = 14/178 (7%)

Query: 127 KKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLMEIQVN 172
           KKAFTK  K++   DGKK +Q     MKKYC VIR              KKAH+MEIQ+N
Sbjct: 1   KKAFTKACKRWRDADGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHIMEIQLN 60

Query: 173 GGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR 232
           GG+VA+KV +     EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW   +LPRKTH+
Sbjct: 61  GGTVAEKVAWVQARMEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLPRKTHK 120

Query: 233 GLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRS 290
           GLRKVACIGAWHPARV  ++ARAGQ GYHHRTE+NKKIY++G+        M   + S
Sbjct: 121 GLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHMEDGKMVRNNAS 178


>gi|320542629|ref|NP_731550.2| ribosomal protein L3, isoform G [Drosophila melanogaster]
 gi|318068758|gb|AAF54611.2| ribosomal protein L3, isoform G [Drosophila melanogaster]
          Length = 138

 Score =  197 bits (500), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 89/125 (71%), Positives = 107/125 (85%), Gaps = 1/125 (0%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKF  PRHGS+ F P+KR++RHRGKVKAFPKDD SKP  LT F+GYKAGMTHIVR+ 
Sbjct: 1   MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  EAVT++ETPP++VVG VGY++TP GLR+L  VWAQHL+EE RRRFYK
Sbjct: 61  DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120

Query: 121 NWCKS 125
           N C S
Sbjct: 121 N-CSS 124


>gi|334362360|gb|AEG78379.1| 60S ribosomal protein L3 [Epinephelus coioides]
          Length = 261

 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 95/177 (53%), Positives = 123/177 (69%), Gaps = 20/177 (11%)

Query: 143 KKDIQAQLEKMKKYCTVIR--------------KKAHLMEIQVNGGSVAQKVDFAYGFFE 188
           +K ++     MKKYC VIR              KK+HLME+Q+NGGS++ KVD+A    E
Sbjct: 1   EKQLEKDFASMKKYCQVIRVIAHTQMRLLPLRQKKSHLMEVQLNGGSISDKVDWAREKLE 60

Query: 189 KQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARV 248
           + +P+  VF +DEMID+IG+TKG GY+GV +RW   +LPRKTHRGLRKVACIGAWHPARV
Sbjct: 61  QAVPVSNVFNQDEMIDVIGITKGHGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARV 120

Query: 249 SFTVARAGQNGYHHRTEMNKKIYKLGKASQE------SHSAMTEFDRSVYLLSSLMG 299
           +F+VARAGQ GYHHRTE+NKKIYK+G+           ++A TE+D S   ++ L G
Sbjct: 121 AFSVARAGQKGYHHRTEINKKIYKIGQGYHTKDGKLVKNNASTEYDLSNKSINPLGG 177


>gi|226480220|emb|CAX78774.1| ribosomal protein L3 [Schistosoma japonicum]
          Length = 327

 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 98/188 (52%), Positives = 129/188 (68%), Gaps = 18/188 (9%)

Query: 134 TKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLMEIQVNGGSVAQK 179
           ++K+  + G   I   L+K+KKYCTV+R              KK H+MEIQVNGG+++QK
Sbjct: 42  SRKWADEAGLALINRDLKKIKKYCTVVRAIAHTQMRLMKHRQKKTHIMEIQVNGGTISQK 101

Query: 180 VDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVAC 239
           VD+    FEKQIP+  VF +DEMID+IGVTKGKG++GV +RW   +LPRKTH+GLRKVAC
Sbjct: 102 VDWIRQHFEKQIPVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVAC 161

Query: 240 IGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE----SHSAMTEFDRSVYLLS 295
           IGAWHPARV+ +VARAGQ GY HRTE+NKKIY++G   Q     + +   + DR   +L 
Sbjct: 162 IGAWHPARVARSVARAGQKGYFHRTELNKKIYRIGMGLQAQLEVAKAEAAKDDRDKNVLP 221

Query: 296 SLMGSFSS 303
              G+ S+
Sbjct: 222 KPKGNAST 229


>gi|355717191|gb|AES05853.1| ribosomal protein L3-like protein [Mustela putorius furo]
          Length = 280

 Score =  194 bits (492), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 98/192 (51%), Positives = 129/192 (67%), Gaps = 20/192 (10%)

Query: 128 KAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLMEIQVNG 173
           KAFTK  K++   DGKK +Q     MKKYC VIR              KKAH+MEIQ+NG
Sbjct: 1   KAFTKACKRWRDADGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHIMEIQLNG 60

Query: 174 GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 233
           G+VA+K  +A    EKQI + +VF + E+ID+I VTKG+G +GV +RW   +LPRKTH+G
Sbjct: 61  GTVAEKGAWAQARLEKQISVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLPRKTHKG 120

Query: 234 LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------HSAMTEF 287
           LRKVACIGAWHPARV  ++ARAGQ GYHHRTE+NKKIY++G+   +       ++A T +
Sbjct: 121 LRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHKEDGKVVRNNASTSY 180

Query: 288 DRSVYLLSSLMG 299
           D +   ++ L G
Sbjct: 181 DVTDKSITPLGG 192


>gi|198285589|gb|ACH85333.1| ribosomal protein L3-like [Salmo salar]
          Length = 251

 Score =  192 bits (489), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 95/167 (56%), Positives = 119/167 (71%), Gaps = 20/167 (11%)

Query: 153 MKKYCTVIR--------------KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQ 198
           MKKYC V+R              KK+HLME+Q+NGGS++ KVD+A    E+ IPI  VF 
Sbjct: 1   MKKYCQVVRIIAHTQMRLLPLRQKKSHLMEVQLNGGSISDKVDWARERLEQSIPITNVFT 60

Query: 199 KDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQN 258
           +DEMID+IGVTKG GY+GV +RW   +LPRKTHRGLRKVACIGAWHP+RV+F+VARAGQ 
Sbjct: 61  QDEMIDVIGVTKGHGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPSRVAFSVARAGQK 120

Query: 259 GYHHRTEMNKKIYKLGKASQE------SHSAMTEFDRSVYLLSSLMG 299
           GYHHRTE+NKKIYK+G+           ++A TE+D S   ++ L G
Sbjct: 121 GYHHRTEINKKIYKIGQGYHTKDGKLVKNNAATEYDLSNKSITPLGG 167


>gi|70927424|ref|XP_736100.1| ribosomal protein L3 [Plasmodium chabaudi chabaudi]
 gi|56510349|emb|CAH85528.1| ribosomal protein L3, putative [Plasmodium chabaudi chabaudi]
          Length = 155

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 95/161 (59%), Positives = 120/161 (74%), Gaps = 6/161 (3%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSLGFLPRKR  R RGK+++FPKD+       TAF+GYK+GM+HIVR+V
Sbjct: 1   MSHRKFERPRHGSLGFLPRKRCKRLRGKIRSFPKDNKELAPHFTAFMGYKSGMSHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           + PGSKLHKKE  EA TI+E  P+VVVG+VGY +TP+GL+ L  VWA H+++E RRR+YK
Sbjct: 61  D-PGSKLHKKEIVEACTIVECAPMVVVGMVGYRETPKGLKVLTAVWANHVSDEFRRRYYK 119

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR 161
           NW KS KKAFTK     E    K       ++++KYCT++R
Sbjct: 120 NWYKSDKKAFTKCLNIPEATKEK-----LYDRIEKYCTILR 155


>gi|294917113|ref|XP_002778404.1| ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
 gi|239886795|gb|EER10199.1| ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
          Length = 230

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 92/156 (58%), Positives = 113/156 (72%), Gaps = 4/156 (2%)

Query: 146 IQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDI 205
           +  Q+ K+K    + +KKAH++E+QVNGGSV+ KV+F    FEK++PI +VF KDEM+DI
Sbjct: 1   MHTQVSKVK----LTQKKAHIVEVQVNGGSVSDKVEFCQSLFEKEVPISSVFDKDEMVDI 56

Query: 206 IGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE 265
           IGVTKG G   V TRWGVTRL RKTHRGLRKVACIGAWHPARV F V RAGQ GYHHR E
Sbjct: 57  IGVTKGHGNTSVTTRWGVTRLARKTHRGLRKVACIGAWHPARVQFQVPRAGQMGYHHRVE 116

Query: 266 MNKKIYKLGKASQESHSAMTEFDRSVYLLSSLMGSF 301
           +NKKIY++GKA +E  +     +       + MG F
Sbjct: 117 INKKIYRIGKALREDPNNAAGSNDLTQKAITPMGGF 152


>gi|408381922|ref|ZP_11179469.1| 50S ribosomal protein L3P [Methanobacterium formicicum DSM 3637]
 gi|407815370|gb|EKF85955.1| 50S ribosomal protein L3P [Methanobacterium formicicum DSM 3637]
          Length = 336

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 107/274 (39%), Positives = 151/274 (55%), Gaps = 10/274 (3%)

Query: 8   HPRHGSLGFLPRKRASRHRGKVKAFP-KDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSK 66
            PR GS+ F PRKRA+R    + ++P +++P     L  F GYK GMTH+ +      S 
Sbjct: 6   QPRKGSVAFSPRKRAARESPTISSWPEREEPG----LLGFPGYKVGMTHVTQLDNTKNSP 61

Query: 67  LHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSK 126
               E    VT++ETPP+VV+G+  Y +T RGL+++  V A   +E+++R+       ++
Sbjct: 62  TEGMEISTPVTVVETPPIVVMGIRAYTRTSRGLKAMTDVLASEFDEDLKRKIS---VPAE 118

Query: 127 KKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGF 186
             +  +     E  D   +I+A +    +  +V +KK  LME  + G SV  K+D+A G 
Sbjct: 119 YDSEAQLASLKENLDKVVEIRALIHTKPRMASVPKKKPELMECGIGGNSVEDKLDYAAGV 178

Query: 187 FEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAWH 244
             K+I    VF   E  D I VTKGKG++GV+ RWGV     K  R    R V  IG W 
Sbjct: 179 LGKEINPADVFADGEHTDAIAVTKGKGFQGVIKRWGVRIQYGKAARSSKARVVGSIGPWT 238

Query: 245 PARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ 278
           PAR  +TV  AGQ GYH RTE NKKI K+G+A Q
Sbjct: 239 PARTMWTVPMAGQMGYHQRTEFNKKILKIGEAEQ 272


>gi|356871227|emb|CCC86742.1| ribosomal subunit, partial [Millerozyma miso]
          Length = 150

 Score =  189 bits (480), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 89/141 (63%), Positives = 110/141 (78%), Gaps = 2/141 (1%)

Query: 161 RKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTR 220
           +KKAHL EIQVNGGS++ KVD+A   FEK + +D+VF+++EM+D I VTKG G+EGV  R
Sbjct: 4   QKKAHLAEIQVNGGSISDKVDWAKEHFEKTVSVDSVFEQNEMVDAIAVTKGHGFEGVTHR 63

Query: 221 WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           WG  +LPRKTHRGLRKVACIGAWHPA V +TV RAGQNGYHHRT +N KIY++G    ES
Sbjct: 64  WGTKKLPRKTHRGLRKVACIGAWHPANVQWTVPRAGQNGYHHRTSINHKIYRIGSGDDES 123

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           + A TEFDR+   ++  MG F
Sbjct: 124 NGA-TEFDRTKKTINP-MGGF 142


>gi|356871225|emb|CCC86741.1| ribosomal subunit, partial [Millerozyma farinosa]
          Length = 150

 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 89/141 (63%), Positives = 110/141 (78%), Gaps = 2/141 (1%)

Query: 161 RKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTR 220
           +KKAHL EIQVNGGS++ KVD+A   FEK + +D+VF+++EMID I VTKG G+EGV  R
Sbjct: 4   QKKAHLAEIQVNGGSISDKVDWAKEHFEKTVSVDSVFEQNEMIDAIAVTKGHGFEGVTHR 63

Query: 221 WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           WG  +LPRKTHRGLRKVACIGAWHPA V +TV RAGQNGYHHRT +N K+Y++G    ES
Sbjct: 64  WGTKKLPRKTHRGLRKVACIGAWHPANVQWTVPRAGQNGYHHRTSINHKVYRVGSGEDES 123

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           + A TEFDR+   ++  MG F
Sbjct: 124 NGA-TEFDRTKKTINP-MGGF 142


>gi|296109263|ref|YP_003616212.1| 50S ribosomal protein L3 [methanocaldococcus infernus ME]
 gi|295434077|gb|ADG13248.1| ribosomal protein L3 [Methanocaldococcus infernus ME]
          Length = 333

 Score =  187 bits (475), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 107/278 (38%), Positives = 162/278 (58%), Gaps = 10/278 (3%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K+  PR GSLGF PRKRA R   +++++P +D     RL AF  YKAGMTH +   +   
Sbjct: 2   KYHTPRRGSLGFSPRKRAKRPVPRIRSWPDEDK---VRLQAFPVYKAGMTHGLIKEDNQK 58

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRG-LRSLCTVWAQHLNEEVRRRFYKNWC 123
           S    +E    +T++E PP+ V G+  Y +  R  L +L  +WA +L++E+ R+      
Sbjct: 59  SPRAGQEVFTPMTVLEAPPINVFGIRVYGRNERNYLTTLTEIWADNLDKELSRKI--KLP 116

Query: 124 KSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFA 183
           K +++   +Y    E  D  +D++  +    K   + +KK  ++EI++ G  + +++++A
Sbjct: 117 KKEERKGVEYLD--EIKDKIEDVRVLVHTNPKLTCLPKKKPEILEIRIGGKDLEERLNYA 174

Query: 184 YGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR-GL-RKVACIG 241
                KQ+ I  VFQ+ E++D IGVTKGKG++GVV RWGV   PRK  R G+ R V  IG
Sbjct: 175 KEILGKQLNITDVFQEGELVDTIGVTKGKGFQGVVKRWGVKIQPRKHRRQGVGRHVGSIG 234

Query: 242 AWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
            W P  + +TV R GQ GYH RTE NK+I K+G   +E
Sbjct: 235 PWQPKMIMWTVPRPGQMGYHQRTEYNKRILKIGNNGEE 272


>gi|356871217|emb|CCC86737.1| ribosomal subunit, partial [Millerozyma farinosa]
 gi|356871219|emb|CCC86738.1| ribosomal subunit, partial [Millerozyma farinosa]
 gi|356871221|emb|CCC86739.1| ribosomal subunit, partial [Millerozyma farinosa]
 gi|356871223|emb|CCC86740.1| ribosomal subunit, partial [Millerozyma farinosa]
          Length = 150

 Score =  187 bits (475), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 88/141 (62%), Positives = 110/141 (78%), Gaps = 2/141 (1%)

Query: 161 RKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTR 220
           +KKAHL EIQVNGGS++ KVD+A   FEK + +D+VF+++EMID I VTKG G+EGV  R
Sbjct: 4   QKKAHLAEIQVNGGSISDKVDWAKEHFEKTVSVDSVFEQNEMIDAIAVTKGHGFEGVTHR 63

Query: 221 WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           WG  +LPRKTHRGLRKVACIGAWHPA V ++V RAGQNGYHHRT +N K+Y++G    ES
Sbjct: 64  WGTKKLPRKTHRGLRKVACIGAWHPANVQWSVPRAGQNGYHHRTSINHKVYRVGSGEDES 123

Query: 281 HSAMTEFDRSVYLLSSLMGSF 301
           + A TEFDR+   ++  MG F
Sbjct: 124 NGA-TEFDRTKKTINP-MGGF 142


>gi|238601436|ref|XP_002395411.1| hypothetical protein MPER_04539 [Moniliophthora perniciosa FA553]
 gi|215466097|gb|EEB96341.1| hypothetical protein MPER_04539 [Moniliophthora perniciosa FA553]
          Length = 219

 Score =  187 bits (475), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 89/140 (63%), Positives = 110/140 (78%), Gaps = 2/140 (1%)

Query: 162 KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRW 221
           KKAHLMEIQVNGGS+A KV++A   FEK   + +VF++DE ID+I VTKG G+EGV  RW
Sbjct: 6   KKAHLMEIQVNGGSIADKVEYAQNLFEKPFEVSSVFEQDENIDVIAVTKGHGFEGVTHRW 65

Query: 222 GVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESH 281
           G  +LPRKTH+GLRKVACIGAWHP++V F+VARAGQ+GYHHRTE+NKKIY++G  S E  
Sbjct: 66  GTKKLPRKTHKGLRKVACIGAWHPSKVMFSVARAGQSGYHHRTELNKKIYRIGSGSDEG- 124

Query: 282 SAMTEFDRSVYLLSSLMGSF 301
           +A TE D S   ++  MG F
Sbjct: 125 NASTEHDISKKPITP-MGGF 143


>gi|343459071|gb|AEM37694.1| ribosomal protein L3 [Epinephelus bruneus]
          Length = 236

 Score =  186 bits (473), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 86/145 (59%), Positives = 113/145 (77%), Gaps = 6/145 (4%)

Query: 161 RKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTR 220
           +KK+HLME+Q+NGGS++ KVD+A    E+ +P++ VF +DEMID+IG+TKG GY+GV +R
Sbjct: 8   QKKSHLMEVQLNGGSISDKVDWAREKLEQAVPVNNVFTQDEMIDVIGITKGHGYKGVTSR 67

Query: 221 WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE- 279
           W   +LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+     
Sbjct: 68  WHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYHTK 127

Query: 280 -----SHSAMTEFDRSVYLLSSLMG 299
                 ++A TE+D S   ++ L G
Sbjct: 128 DGKLVKNNASTEYDLSNKSINPLGG 152


>gi|22758910|gb|AAN05614.1| ribosomal protein L3 [Argopecten irradians]
          Length = 254

 Score =  186 bits (473), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 94/166 (56%), Positives = 117/166 (70%), Gaps = 20/166 (12%)

Query: 155 KYCTVIR-------------KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDE 201
           KYC VIR             KKAH+MEIQVNGG+++QKVD+A    E  +P+ +VF  DE
Sbjct: 9   KYCKVIRYAHTQTKLLKKRQKKAHIMEIQVNGGTISQKVDWAREKMESSVPVGSVFAMDE 68

Query: 202 MIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYH 261
            IDIIGVTKGKG +GV +RW   +LPRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYH
Sbjct: 69  NIDIIGVTKGKGVKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYH 128

Query: 262 HRTEMNKKIYKLGKASQE------SHSAMTEFDRSVYLLSSLMGSF 301
           HRTE+NKKIY++G+ +         ++A T+FD S   ++  MG F
Sbjct: 129 HRTEINKKIYRMGEGTHTKDGKLVKNNASTDFDPSEKNITP-MGGF 173


>gi|336121494|ref|YP_004576269.1| 50S ribosomal protein L3 [Methanothermococcus okinawensis IH1]
 gi|334856015|gb|AEH06491.1| ribosomal protein L3 [Methanothermococcus okinawensis IH1]
          Length = 333

 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 102/277 (36%), Positives = 157/277 (56%), Gaps = 10/277 (3%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   PR GSL F PRKRA R   K++++P D+     RL AF  YKAG TH +     P 
Sbjct: 4   KRNRPRRGSLAFSPRKRAKRPVPKIRSWPNDEK---VRLQAFPVYKAGTTHALVKENNPK 60

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
           S   +++    VT++E P + V G+  Y KT +GL++L  VWA++L++E+ R+       
Sbjct: 61  SPNAEQDVFTPVTVLEAPDITVAGIRVYEKTTKGLKTLTEVWAENLDKELNRKIT----- 115

Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAY 184
           + K+      K  E  D   +++A +    K   + +KK  ++EI++ G ++++K+ +A 
Sbjct: 116 TPKEPKANIEKLDEVADKIAEVRAIVHTNPKNTNLPKKKPEIIEIRIGGNNISEKLAYAK 175

Query: 185 GFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPRKTHRGL-RKVACIGA 242
               K + I+ VF   E ID I +TKGKG++G V RWG+  +  +  ++G+ R    IG 
Sbjct: 176 EILGKTLSINDVFTDGEFIDTIAITKGKGFQGPVKRWGIKIQFGKHRNKGVGRHTGSIGP 235

Query: 243 WHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
           W P RV +TV  AGQ GYH RTE NK+I K+G   +E
Sbjct: 236 WTPKRVMWTVPMAGQMGYHQRTEYNKRILKIGNNGEE 272


>gi|226480232|emb|CAX78780.1| ribosomal protein L3 [Schistosoma japonicum]
          Length = 252

 Score =  182 bits (463), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 87/147 (59%), Positives = 112/147 (76%), Gaps = 4/147 (2%)

Query: 161 RKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTR 220
           +KKAH+MEIQVNGG+++QKVD+    FEKQIP+  VF +DEMID+IGVTKGKG++GV +R
Sbjct: 8   QKKAHIMEIQVNGGTISQKVDWIRQHFEKQIPVSNVFSQDEMIDVIGVTKGKGFKGVTSR 67

Query: 221 WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE- 279
           W   +LPRKTH+GLRKVACIGAWHPARV+ +VARAGQ GY HRTE+NKKIY++G   Q  
Sbjct: 68  WHTKKLPRKTHKGLRKVACIGAWHPARVARSVARAGQKGYFHRTELNKKIYRIGMGLQAQ 127

Query: 280 ---SHSAMTEFDRSVYLLSSLMGSFSS 303
              + +   + DR   +L    G+ S+
Sbjct: 128 LEVAKAEAAKDDRDKNVLPKPKGNAST 154


>gi|410722182|ref|ZP_11361491.1| archaeal ribosomal protein L3 [Methanobacterium sp. Maddingley
           MBC34]
 gi|410597418|gb|EKQ52037.1| archaeal ribosomal protein L3 [Methanobacterium sp. Maddingley
           MBC34]
          Length = 336

 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 103/274 (37%), Positives = 151/274 (55%), Gaps = 10/274 (3%)

Query: 8   HPRHGSLGFLPRKRASRHRGKVKAFP-KDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSK 66
            PR GS+ F PRKRA+R   ++ ++P +++P     L  F GYK GMTH+ +      S 
Sbjct: 6   QPRKGSVAFSPRKRAARESPRISSWPEREEPG----LLGFPGYKVGMTHVTQMDNTKNSP 61

Query: 67  LHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSK 126
               E    VT++ETPP+VV+G+  Y +T RG++++  V A  ++E+++R+        +
Sbjct: 62  TEGMEISTPVTVVETPPIVVMGIRAYTQTSRGIKAMTDVLAAEMDEDLKRKIS---IPVE 118

Query: 127 KKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGF 186
             +  +     E  D   +I+A +    +  +V +KK  L+E  + G SV  K+++A   
Sbjct: 119 YDSEAQLASLKEKMDQVVEIRALIHTKPRMASVPKKKPELLECGIGGNSVEDKLEYAASV 178

Query: 187 FEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGAWH 244
             K+I    VF   E  D I VTKGKG++GV+ RWGV     K  R    R V  IG W 
Sbjct: 179 LGKEINPADVFADGEHTDAIAVTKGKGFQGVIKRWGVRIQYGKAARSSKGRHVGSIGPWS 238

Query: 245 PARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ 278
           PAR  +TV  AGQ GYH RTE NKKI K+G+A Q
Sbjct: 239 PARTMWTVPMAGQMGYHQRTEYNKKILKIGEAEQ 272


>gi|82408380|gb|ABB73034.1| ribosomal protein L3 [Mytilus edulis]
          Length = 160

 Score =  181 bits (459), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 95/155 (61%), Positives = 123/155 (79%), Gaps = 14/155 (9%)

Query: 43  LTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSL 102
           LTAF+GYKAGM+HIVR+V++PGSK HKKE  EAVTI+E PP++VVGVVGY++TP GLR+ 
Sbjct: 6   LTAFIGYKAGMSHIVREVDRPGSKSHKKEIVEAVTILEAPPMMVVGVVGYIETPSGLRAF 65

Query: 103 CTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR- 161
            T++A+HL+EE +RRFYKNW +SKKKAF+K  KK++ + GKK+I+    KMKKYC VIR 
Sbjct: 66  KTIFAEHLSEECKRRFYKNWYRSKKKAFSKSAKKWQDEAGKKEIERDFNKMKKYCRVIRV 125

Query: 162 -------------KKAHLMEIQVNGGSVAQKVDFA 183
                        KKAH+MEIQVNGG+++QKVD+A
Sbjct: 126 LAHTQTKLMKKRQKKAHIMEIQVNGGTISQKVDWA 160


>gi|388493378|gb|AFK34755.1| unknown [Lotus japonicus]
          Length = 173

 Score =  180 bits (457), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 86/100 (86%), Positives = 92/100 (92%), Gaps = 1/100 (1%)

Query: 202 MIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYH 261
           MIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYH
Sbjct: 1   MIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYH 60

Query: 262 HRTEMNKKIYKLGKASQESHSAMTEFDRSVYLLSSLMGSF 301
           HRTE+NKKIY+LGKA  ESHSA+TEFDR+   ++  MG F
Sbjct: 61  HRTELNKKIYRLGKAGDESHSAITEFDRTEKEITP-MGGF 99


>gi|154343493|ref|XP_001567692.1| putative ribosomal protein L3, partial [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134065024|emb|CAM43136.1| putative ribosomal protein L3, partial [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 131

 Score =  180 bits (457), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 82/131 (62%), Positives = 107/131 (81%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSH KFEHPRHG LGFLPRKR+ + RG+ +AFPKDD ++   LT+F+ +KAGMTHIVRDV
Sbjct: 1   MSHCKFEHPRHGHLGFLPRKRSRQIRGRARAFPKDDATQKPHLTSFMVFKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++PGSK++KKE  E VTI+E PP+VVVG+VGY +TP GL+++ TVWA H + E RRR+YK
Sbjct: 61  DRPGSKVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGLKTMGTVWAHHTSVEFRRRYYK 120

Query: 121 NWCKSKKKAFT 131
           NW +S + AF+
Sbjct: 121 NWKQSAQLAFS 131


>gi|345802423|ref|XP_547185.3| PREDICTED: ribosomal protein L3-like [Canis lupus familiaris]
          Length = 255

 Score =  180 bits (456), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 88/167 (52%), Positives = 117/167 (70%), Gaps = 20/167 (11%)

Query: 153 MKKYCTVIR--------------KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQ 198
           MKKYC VIR              KKAH+MEIQ+NGG+VA+KV +A    EKQ+P+ +VF 
Sbjct: 1   MKKYCKVIRVIVHTQMKLLPFRQKKAHIMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFS 60

Query: 199 KDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQN 258
           ++E+ID+I VTKG+G +GV +RW   +LPRKTH+GLRKVACIGAWHPARV  ++ARAGQ 
Sbjct: 61  QNEVIDVIAVTKGRGVKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQK 120

Query: 259 GYHHRTEMNKKIYKLGKASQES------HSAMTEFDRSVYLLSSLMG 299
           GYHHRTE+NKKIY++G+           ++A T +D +   ++ L G
Sbjct: 121 GYHHRTELNKKIYRIGRGLHMEEGKVVKNNAATSYDVTDKSITPLGG 167


>gi|149052059|gb|EDM03876.1| rCG33081 [Rattus norvegicus]
          Length = 255

 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 85/152 (55%), Positives = 108/152 (71%), Gaps = 14/152 (9%)

Query: 153 MKKYCTVIR--------------KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQ 198
           MKKYC VIR              KKAH+MEIQ+NGG+VA+KV +A    EKQ+P+ +VF 
Sbjct: 1   MKKYCKVIRVIVHTQMKLLPFRQKKAHIMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFS 60

Query: 199 KDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQN 258
           + E+ID+I VTKG+G +GV +RW   +LPRKTH+GLRKVACIGAWHPARV  ++ARAGQ 
Sbjct: 61  QSEVIDVIAVTKGRGVKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQK 120

Query: 259 GYHHRTEMNKKIYKLGKASQESHSAMTEFDRS 290
           GYHHRTE+NKKIY++G+        M   + S
Sbjct: 121 GYHHRTELNKKIYRIGRGLHMEDGKMVRNNAS 152


>gi|324528901|gb|ADY48966.1| 60S ribosomal protein L3, partial [Ascaris suum]
          Length = 222

 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 86/138 (62%), Positives = 108/138 (78%), Gaps = 4/138 (2%)

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           MEIQVNGG+V +KVD+A    EKQ+ +D+VF +DEMID IGVTKGKG++GV +RW   +L
Sbjct: 1   MEIQVNGGTVPEKVDWAKEHLEKQVAVDSVFAQDEMIDCIGVTKGKGFKGVTSRWHTKKL 60

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA---SQESHSA 283
           PRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYHHRTE+NKKIY+LGK+    +   + 
Sbjct: 61  PRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEVNKKIYRLGKSCLTEEGKRNG 120

Query: 284 MTEFDRSVYLLSSLMGSF 301
            TE+D +   ++  MG F
Sbjct: 121 GTEYDITEKSINP-MGGF 137


>gi|256810689|ref|YP_003128058.1| 50S ribosomal protein L3P [Methanocaldococcus fervens AG86]
 gi|256793889|gb|ACV24558.1| ribosomal protein L3 [Methanocaldococcus fervens AG86]
          Length = 335

 Score =  177 bits (450), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 104/278 (37%), Positives = 155/278 (55%), Gaps = 12/278 (4%)

Query: 6   FEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGS 65
              PR GSL F PRKRA R   +++++P++D     RL AF  YKAGMTH     + P S
Sbjct: 5   INRPRRGSLAFSPRKRAKRPVPRIRSWPEEDN---VRLQAFPVYKAGMTHAFIKEDNPKS 61

Query: 66  KLHKKETCEAVTIIETPPLVVVGVVGYVKTPRG-LRSLCTVWAQHLNEEVRRRFYKNWCK 124
               +E    VT++E PP+ V  +  Y +  R  L +L  VWA +L++E+ R+      K
Sbjct: 62  PNAGQEVFTPVTVLEAPPINVCAIRVYGRNERNYLTTLTEVWADNLDKELERKI-----K 116

Query: 125 SKKKAFTKYTKKYET-DDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFA 183
             KK   K  +  E   D  +D++  +    K   + +KK  ++EI++ G  + +++++A
Sbjct: 117 LPKKEERKTVEDLEAIKDKIEDVRVLVHTNPKLTCLPKKKPEILEIRIGGKDIEERLNYA 176

Query: 184 YGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPRKTHRGL-RKVACIG 241
                KQ+ I  VFQ+ E++D IGVTKGKG++G V RWGV  +  +   +G+ R V  IG
Sbjct: 177 KEILGKQLNITDVFQEGELVDTIGVTKGKGFQGQVKRWGVKIQFGKHARKGVGRHVGSIG 236

Query: 242 AWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
            W P  V +TV   GQ GYH RTE NK+I K+G   +E
Sbjct: 237 PWQPKMVMWTVPMPGQMGYHQRTEYNKRILKIGNNGEE 274


>gi|448618114|ref|ZP_21666459.1| 50S ribosomal protein L3P [Haloferax mediterranei ATCC 33500]
 gi|445747669|gb|ELZ99124.1| 50S ribosomal protein L3P [Haloferax mediterranei ATCC 33500]
          Length = 338

 Score =  177 bits (449), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 103/279 (36%), Positives = 154/279 (55%), Gaps = 12/279 (4%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GS+GF PRKRA +   ++K++P DD S    L  F GYKAGMTH++   ++  S   
Sbjct: 7   PRKGSMGFSPRKRAVKEVPRIKSWPDDDGS--PALQGFAGYKAGMTHVMMVNDEADSPRE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRF---YKNWCKS 125
             E    VT++ETPP+  V +  Y +TP G++    VWA   ++E+ R      ++  +S
Sbjct: 65  GMEESVPVTVVETPPMRAVALRAYEQTPYGMKPKTEVWASEFHDELDRVLDLPAEDTFES 124

Query: 126 KKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYG 185
              A  +  +  E DD +        ++K    V +KK  +ME +V GGS+ ++ DFA  
Sbjct: 125 DADALREAVEAGEVDDLRVITHTVPAELK---NVPKKKPDVMETRVGGGSMVERADFALD 181

Query: 186 FFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIG 241
             E+  +  +  VF+  E +D  GVTKGKG +G V RWGV +   K  R    R++  +G
Sbjct: 182 LVEEGGEHEMSDVFRAGEYLDAAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLG 241

Query: 242 AWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
            W+P+RV  TV + GQ GYH RTE+NK++  LG+    S
Sbjct: 242 PWNPSRVRSTVPQLGQTGYHQRTELNKRLIDLGEGDDAS 280


>gi|150399607|ref|YP_001323374.1| 50S ribosomal protein L3P [Methanococcus vannielii SB]
 gi|9910844|sp|Q9UWG2.1|RL3_METVA RecName: Full=50S ribosomal protein L3P
 gi|166233160|sp|A6UQJ0.1|RL3_METVS RecName: Full=50S ribosomal protein L3P
 gi|150012310|gb|ABR54762.1| ribosomal protein L3 [Methanococcus vannielii SB]
          Length = 334

 Score =  177 bits (449), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 105/277 (37%), Positives = 153/277 (55%), Gaps = 9/277 (3%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   PR GSL F PRKRA +   K++++P D   K   L AF  YKAG TH +     P 
Sbjct: 4   KKNRPRRGSLAFSPRKRAKKLVPKIRSWPAD---KKVGLQAFPVYKAGTTHALLVENNPK 60

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
           S  + +E    VT++ETP + V G+  Y KT +GL++L  VWA+  ++E+ R+       
Sbjct: 61  SPNNGQEVFSPVTVLETPEITVAGIRAYGKTTKGLKALTEVWAKQQDKELGRKL----TV 116

Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAY 184
           +KK+            +   D++  +    K   + +KK  ++EI+V G SVA+K+ +A 
Sbjct: 117 TKKEEIKTVESLDAVLEKTVDLRVIVHTNPKTTGIPKKKPEVVEIRVGGSSVAEKLAYAK 176

Query: 185 GFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPRKTHRGL-RKVACIGA 242
               K + I+ VF+  E ID + VTKGKG++G V RWGV  +  +   +G+ R+   IG 
Sbjct: 177 DILGKTLSINDVFETGEFIDTLAVTKGKGFQGPVKRWGVKIQFGKHQRKGVGRQTGSIGP 236

Query: 243 WHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
           W P RV +TV  AGQ G+H RTE NK+I KLG    E
Sbjct: 237 WRPKRVMWTVPLAGQMGFHQRTEYNKRILKLGSEGAE 273


>gi|337283644|ref|YP_004623118.1| 50S ribosomal protein L3P [Pyrococcus yayanosii CH1]
 gi|334899578|gb|AEH23846.1| 50S ribosomal protein L3P [Pyrococcus yayanosii CH1]
          Length = 359

 Score =  177 bits (449), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 107/289 (37%), Positives = 158/289 (54%), Gaps = 23/289 (7%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   PR GSLGF PRKRA     +++++PK+      R+  F GYKAGMTHI+   ++PG
Sbjct: 3   KVHRPRRGSLGFTPRKRAKSIVPRIRSWPKETE---VRMLGFAGYKAGMTHILMIDDEPG 59

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHL---NEEVRRRFYKN 121
              + KE    VTI+ETPPL V GV  Y +   GL +   V        N   ++   K 
Sbjct: 60  LT-NGKEIFMPVTIVETPPLRVFGVRAYRQGYLGLETATEVIVPDFTLDNYVTKKGKQKT 118

Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVI---------------RKKAHL 166
           + +  ++      K Y  DD ++ +  +LE + K   ++               +KK  +
Sbjct: 119 FYELLRRRIATLPKNYTEDDFQQKL-GELEDLIKEGEIVEVRALVSTQPWIIKLKKKPEV 177

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           ME  + G SV +K ++      K++ +  V ++ E++D+I VTKGKG +GV+ RWGV   
Sbjct: 178 MEYAIGGTSVEEKFNYIKERLGKELRVKDVLKEGELLDVIAVTKGKGTQGVIKRWGVKLR 237

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK 275
             K  +G RKVA IG WHPARV +TV  AGQ G+HHRTE+NK++  +G+
Sbjct: 238 AHKDSKGRRKVASIGPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIGE 286


>gi|190895944|gb|ACE96485.1| casein kinase II regulatory subunit [Populus tremula]
 gi|190895946|gb|ACE96486.1| casein kinase II regulatory subunit [Populus tremula]
 gi|190895948|gb|ACE96487.1| casein kinase II regulatory subunit [Populus tremula]
 gi|190895950|gb|ACE96488.1| casein kinase II regulatory subunit [Populus tremula]
 gi|190895952|gb|ACE96489.1| casein kinase II regulatory subunit [Populus tremula]
 gi|190895954|gb|ACE96490.1| casein kinase II regulatory subunit [Populus tremula]
 gi|190895958|gb|ACE96492.1| casein kinase II regulatory subunit [Populus tremula]
 gi|190895960|gb|ACE96493.1| casein kinase II regulatory subunit [Populus tremula]
 gi|190895962|gb|ACE96494.1| casein kinase II regulatory subunit [Populus tremula]
 gi|190895964|gb|ACE96495.1| casein kinase II regulatory subunit [Populus tremula]
 gi|190895966|gb|ACE96496.1| casein kinase II regulatory subunit [Populus tremula]
 gi|190895968|gb|ACE96497.1| casein kinase II regulatory subunit [Populus tremula]
 gi|190895970|gb|ACE96498.1| casein kinase II regulatory subunit [Populus tremula]
 gi|190895972|gb|ACE96499.1| casein kinase II regulatory subunit [Populus tremula]
 gi|190895974|gb|ACE96500.1| casein kinase II regulatory subunit [Populus tremula]
          Length = 99

 Score =  177 bits (448), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 84/97 (86%), Positives = 91/97 (93%), Gaps = 3/97 (3%)

Query: 149 QLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGV 208
           Q+ KMK    + +KKAHLMEIQVNGG++AQKVDFAYGFFEKQ+PIDAVFQKDEMID+IGV
Sbjct: 6   QIRKMK---GLKQKKAHLMEIQVNGGTIAQKVDFAYGFFEKQVPIDAVFQKDEMIDVIGV 62

Query: 209 TKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHP 245
           TKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHP
Sbjct: 63  TKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHP 99


>gi|312137075|ref|YP_004004412.1| 50S ribosomal protein L3 [Methanothermus fervidus DSM 2088]
 gi|311224794|gb|ADP77650.1| LSU ribosomal protein L3P [Methanothermus fervidus DSM 2088]
          Length = 333

 Score =  176 bits (447), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 106/277 (38%), Positives = 148/277 (53%), Gaps = 9/277 (3%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   PR GSL F PRKRASR   ++K++P+    K   L A  GYK GMTH++    K  
Sbjct: 3   KHHRPRRGSLAFSPRKRASRETPRIKSWPE---IKDTCLLAAAGYKVGMTHVMAIDNKKN 59

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
           S     E    VTIIETPPL V+G+  Y +T RGL++L  V A  L E++ RR       
Sbjct: 60  SPTEGMEVFTPVTIIETPPLTVMGIRAYERTSRGLKTLTDVLADDLKEDLERRINLPKNY 119

Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCT-VIRKKAHLMEIQVNGGSVAQKVDFA 183
            K KA  K     E  D  ++++  +    +  T V +KK  + E  + G    +K+++A
Sbjct: 120 DKDKALDKIE---ENKDYIEEVRVLVHTNPRLVTGVPKKKPEIFECGLGGKDPQEKLEYA 176

Query: 184 YGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIG 241
                K + I  +F + E +D I VTKGKG++G V RWG+     KT R    R +  +G
Sbjct: 177 LELLGKDVKISEIFSEGEYVDTIAVTKGKGFQGPVKRWGIKIQNAKTARSGKGRHIGSLG 236

Query: 242 AWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ 278
            W P+R  + V +AGQ GYH RTE NK I K+G + +
Sbjct: 237 PWTPSRTMWRVPQAGQTGYHRRTEYNKMIMKIGTSDE 273


>gi|288560108|ref|YP_003423594.1| 50S ribosomal protein L3 [Methanobrevibacter ruminantium M1]
 gi|288542818|gb|ADC46702.1| ribosomal protein L3P Rpl3p [Methanobrevibacter ruminantium M1]
          Length = 336

 Score =  176 bits (446), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 101/274 (36%), Positives = 151/274 (55%), Gaps = 10/274 (3%)

Query: 8   HPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTH-IVRDVEKPGSK 66
            PR GS+ F PRKR ++   ++KA+P ++  K   L    GYKAGMTH +V D +K  S 
Sbjct: 6   QPRKGSVAFSPRKRVAKETPRIKAWPSNEEPK---LLGLAGYKAGMTHAMVVDNDK-NSP 61

Query: 67  LHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSK 126
            H  E    VT++E PPLV++G+  Y KT  GL+++  V A +L+EE+ R+        +
Sbjct: 62  SHGMEVFTPVTVLEVPPLVILGIRSYEKTAHGLKAITEVIADNLDEELSRKITLPKDYDQ 121

Query: 127 KKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGF 186
            +A  K     E  +   +++  +    K  +V +KK  + E  + G S  +K+++A G 
Sbjct: 122 SEAIAKIQDALEKTE---EVRVLVHTNPKMASVPKKKPEIFECALGGSSAEEKLNYALGI 178

Query: 187 FEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAWH 244
             ++I    +F + + +D I  TKGKG +GVV RW +     K  R    R V  IG W 
Sbjct: 179 LGQEIRASDIFSEGQYVDAIATTKGKGVQGVVKRWNIRIQYGKAMRSGKGRHVGSIGPWS 238

Query: 245 PARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ 278
           P R  +TVA+AGQ GYH RTE NKK+ K+G  S+
Sbjct: 239 PERTMWTVAQAGQMGYHKRTEFNKKVIKIGDVSE 272


>gi|448611747|ref|ZP_21662177.1| 50S ribosomal protein L3P [Haloferax mucosum ATCC BAA-1512]
 gi|445742508|gb|ELZ94002.1| 50S ribosomal protein L3P [Haloferax mucosum ATCC BAA-1512]
          Length = 338

 Score =  176 bits (446), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/279 (36%), Positives = 154/279 (55%), Gaps = 12/279 (4%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GS+GF PRKRA +   ++K++P DD S    L  F GYKAGMTH++   ++  S   
Sbjct: 7   PRKGSMGFSPRKRAVKEVPRIKSWPSDDGS--PALQGFAGYKAGMTHVMMVNDEADSPRE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRF---YKNWCKS 125
             E    VT++ETPP+  V +  Y +TP G++    VWA   ++E+ R      ++  +S
Sbjct: 65  GMEESVPVTVVETPPMRAVALRAYEQTPYGMKPKTEVWASEFHDELDRVLDLPAEDTFES 124

Query: 126 KKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYG 185
              A  +  +  E DD +        ++K    V +KK  +ME +V GGS+ ++ DFA  
Sbjct: 125 DADALREAVEAGEVDDLRVITHTVPSELK---NVPKKKPDVMETRVGGGSMVERADFALD 181

Query: 186 FFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIG 241
              +  +  +  VF+  E +D  GVTKGKG +G V RWGV +   K  R    R++  +G
Sbjct: 182 LVAEGGEHEMSDVFRAGEYLDAAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLG 241

Query: 242 AWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
            W+P+RV  TV + GQ GYH RTE+NK++  LG+  + S
Sbjct: 242 PWNPSRVRSTVPQLGQTGYHQRTELNKRLIDLGEGDEAS 280


>gi|414588496|tpg|DAA39067.1| TPA: hypothetical protein ZEAMMB73_537924, partial [Zea mays]
          Length = 124

 Score =  176 bits (445), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 83/102 (81%), Positives = 91/102 (89%)

Query: 64  GSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWC 123
            S+LHKKETCEAVTIIETPPLV+VG+V YVKTPRGLR+L +VWAQHL+EEVRRRFYKNWC
Sbjct: 22  SSELHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEEVRRRFYKNWC 81

Query: 124 KSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAH 165
           KSKKKAFTKY  KYE D GKK+IQ QLEKMKKY +VIR  AH
Sbjct: 82  KSKKKAFTKYALKYENDAGKKEIQLQLEKMKKYASVIRVIAH 123


>gi|347970124|ref|XP_003436525.1| AGAP003556-PB [Anopheles gambiae str. PEST]
 gi|333468789|gb|EGK97067.1| AGAP003556-PB [Anopheles gambiae str. PEST]
          Length = 123

 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 82/112 (73%), Positives = 96/112 (85%), Gaps = 1/112 (0%)

Query: 14  LGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 73
           + F P+KRASRH+G+VKAFPKDD SKP  LTAFL YKAGMTHIVR+ ++PGSK++KKE  
Sbjct: 1   MAFYPKKRASRHQGRVKAFPKDDASKPVHLTAFLAYKAGMTHIVREADRPGSKINKKEVV 60

Query: 74  EAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKS 125
           EAVTI+ETPPLVVVG VGY++TP G R+LC VWAQHL+EE RRRFYKN C S
Sbjct: 61  EAVTILETPPLVVVGAVGYIETPFGPRALCNVWAQHLSEECRRRFYKN-CPS 111


>gi|448565515|ref|ZP_21636382.1| 50S ribosomal protein L3P [Haloferax prahovense DSM 18310]
 gi|448583470|ref|ZP_21646826.1| 50S ribosomal protein L3P [Haloferax gibbonsii ATCC 33959]
 gi|445715259|gb|ELZ67015.1| 50S ribosomal protein L3P [Haloferax prahovense DSM 18310]
 gi|445729699|gb|ELZ81294.1| 50S ribosomal protein L3P [Haloferax gibbonsii ATCC 33959]
          Length = 338

 Score =  175 bits (444), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 102/282 (36%), Positives = 153/282 (54%), Gaps = 18/282 (6%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GS+GF PRKR ++   ++K++P DD S    L  F GYKAGMTH++   ++  S   
Sbjct: 7   PRKGSMGFSPRKRVTKEVPRIKSWPSDDGS--PALQGFAGYKAGMTHVMMVNDEADSPRE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRF---YKNWCKS 125
             E    VT++ETPP+  V +  Y +TP G++    VW    ++E+ R      +N   S
Sbjct: 65  GMEESVPVTVVETPPMRAVALRAYEQTPYGMKPQTEVWTDEFHDELDRVLDLPAENTFDS 124

Query: 126 KKKAFTKYTKKYETDDGK---KDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDF 182
              A  +  +  E DD +     + A+L        V +KK  +ME +V GGS+ ++ DF
Sbjct: 125 DADALREAVEAGEVDDLRVITHTVPAEL------ANVPKKKPDVMETRVGGGSMVERADF 178

Query: 183 AYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVA 238
           A     +  +  +  VF+  E +D  GVTKGKG +G V RWGV +   K  R    R++ 
Sbjct: 179 ALDLVAEGGEHEMSDVFRAGEYLDAAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIG 238

Query: 239 CIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
            +G W+P+RV  TV + GQ GYH RTE+NK++  LG+  + S
Sbjct: 239 NLGPWNPSRVRSTVPQLGQTGYHQRTELNKRLIDLGEGDEAS 280


>gi|190895956|gb|ACE96491.1| casein kinase II regulatory subunit [Populus tremula]
          Length = 99

 Score =  175 bits (443), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 83/97 (85%), Positives = 90/97 (92%), Gaps = 3/97 (3%)

Query: 149 QLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGV 208
           Q+ KMK    + +KKAHLMEIQVNGG++AQKVDF YGFFEKQ+PIDAVFQKDEMID+IGV
Sbjct: 6   QIRKMK---GLKQKKAHLMEIQVNGGTIAQKVDFGYGFFEKQVPIDAVFQKDEMIDVIGV 62

Query: 209 TKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHP 245
           TKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHP
Sbjct: 63  TKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHP 99


>gi|223477993|ref|YP_002582389.1| 50S ribosomal protein L3e (L3p) [Thermococcus sp. AM4]
 gi|214033219|gb|EEB74047.1| LSU ribosomal protein L3e (L3p) [Thermococcus sp. AM4]
          Length = 346

 Score =  175 bits (443), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/276 (38%), Positives = 147/276 (53%), Gaps = 10/276 (3%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   PR GSL F PRKRA     ++K +PKD      R+  F GYKAGMTHI+   + PG
Sbjct: 3   KVHRPRRGSLAFSPRKRARSVVPRIKKWPKDSE---VRMLGFAGYKAGMTHILMIDDSPG 59

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRR---FYKN 121
                KE    VTI+E PPL V G+  Y +   GL +   VW   LN+ V+RR     KN
Sbjct: 60  LT-KGKEIFVPVTIVEVPPLFVYGIRAYKQGYLGLETATEVWFHELNDNVKRRIKTLPKN 118

Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVD 181
           + +   KA     +    D    D++  L   + +   ++KK  +ME  + G  V  K D
Sbjct: 119 YGEEDFKAKLGQLEDLVNDGEIVDVRL-LVHTQPWLIKLKKKPEVMEYAIGGDDVKAKFD 177

Query: 182 FAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVAC 239
           +A     K++    V  + E++D+I VTKGKG +G V RWG+     K  R    R V  
Sbjct: 178 YAKEKIGKELRASEVLHEGELLDVIAVTKGKGTQGPVKRWGIKVQFHKAQRAGKGRHVGN 237

Query: 240 IGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK 275
           +G WHPARV +TV +AGQ G+HHRTE NK++  +G+
Sbjct: 238 LGPWHPARVMWTVPQAGQMGFHHRTEFNKRLIAIGE 273


>gi|389853117|ref|YP_006355351.1| 50S ribosomal protein L3 [Pyrococcus sp. ST04]
 gi|388250423|gb|AFK23276.1| rplC, large subunit ribosomal protein L3 [Pyrococcus sp. ST04]
          Length = 361

 Score =  174 bits (442), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 109/294 (37%), Positives = 156/294 (53%), Gaps = 33/294 (11%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   PR GSLGF PRKRA     +++++PK+      R+  F GYKAGMTHI+   ++PG
Sbjct: 3   KIHRPRRGSLGFSPRKRAKSIVPRIRSWPKETE---VRMLGFAGYKAGMTHILMIDDEPG 59

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHL---------NEEVR 115
              + KE    VTIIETPPL V G+  Y +   GL +   V              N++V 
Sbjct: 60  LT-NGKEIFVPVTIIETPPLRVFGIRAYRQGYLGLETATEVIVPDFKLDNYPVKPNKKVE 118

Query: 116 RRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVI--------------- 160
             FYK      ++      K Y  +  ++ +  QLE M K   ++               
Sbjct: 119 MTFYKLL----RRRIATLPKDYTQEQFEQKL-GQLEDMIKEGEIVEVRALVSTQPWIIKL 173

Query: 161 RKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTR 220
           +KK  +ME  + G SV +K ++      K++ +D V ++ E++D+I VTKGKG +G V R
Sbjct: 174 KKKPEVMEYAIGGTSVEEKFNYIKERLGKELRVDEVLKEGELLDVIAVTKGKGTQGPVKR 233

Query: 221 WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLG 274
           WG+     K  +G RKV  IG WHPARV +TV  AGQ G+HHRTE+NK++  +G
Sbjct: 234 WGIKLRAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIG 287


>gi|15668348|ref|NP_247144.1| 50S ribosomal protein L3P [Methanocaldococcus jannaschii DSM 2661]
 gi|1710558|sp|P54014.1|RL3_METJA RecName: Full=50S ribosomal protein L3P
 gi|1590928|gb|AAB98161.1| LSU ribosomal protein L3P (rplC) [Methanocaldococcus jannaschii DSM
           2661]
          Length = 335

 Score =  174 bits (442), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 102/278 (36%), Positives = 154/278 (55%), Gaps = 12/278 (4%)

Query: 6   FEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGS 65
              PR GSL F PRKRA R   +++++P++D     RL AF  YKAGM+H     + P S
Sbjct: 5   INRPRRGSLAFSPRKRAKRPVPRIRSWPEEDT---VRLQAFPVYKAGMSHAFIKEDNPKS 61

Query: 66  KLHKKETCEAVTIIETPPLVVVGVVGYVKTPRG-LRSLCTVWAQHLNEEVRRRFYKNWCK 124
               +E    +TI+E PP+ V  +  Y +  R  L +L  VWA +L++E+ R+      K
Sbjct: 62  PNAGQEVFTPITILEAPPINVCAIRVYGRNERNYLTTLTEVWADNLDKELERKI-----K 116

Query: 125 SKKKAFTKYTKKYET-DDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFA 183
             KK   K  +  E   D  +D++  +    K   + +KK  ++EI++ G  + +++++A
Sbjct: 117 LPKKEDRKTVEDLEALKDKIEDVRVLVHTNPKLTCLPKKKPEILEIRIGGKDIEERLNYA 176

Query: 184 YGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPRKTHRGL-RKVACIG 241
                KQ+ I  VFQ+ E++D IGVTKGKG++G V RWGV  +  +   +G+ R V  IG
Sbjct: 177 KEILGKQLNITDVFQEGELVDTIGVTKGKGFQGQVKRWGVKIQFGKHARKGVGRHVGSIG 236

Query: 242 AWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
            W P  V ++V   GQ GYH RTE NK+I K+G    E
Sbjct: 237 PWQPKMVMWSVPMPGQMGYHQRTEYNKRILKIGNNGDE 274


>gi|333911089|ref|YP_004484822.1| 50S ribosomal protein L3 [Methanotorris igneus Kol 5]
 gi|333751678|gb|AEF96757.1| ribosomal protein L3 [Methanotorris igneus Kol 5]
          Length = 335

 Score =  174 bits (442), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 99/277 (35%), Positives = 151/277 (54%), Gaps = 8/277 (2%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   PR GSL F PRKRA R   +++++P +D     RL AF  YKAGM+H +     P 
Sbjct: 4   KRNRPRRGSLAFSPRKRAKRPVPRIRSWPDEDK---VRLQAFPVYKAGMSHALVKENNPN 60

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
           S    +E    +TI+E P + V  +  Y K  RGL++L  VWA  L++E+ R+      K
Sbjct: 61  SPNANQEVFTPITILEAPDINVFAIRVYGKDTRGLKTLTEVWADELDKELARKIKTLPKK 120

Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAY 184
            ++K   +        D   D++  +    K   + +KK  ++EI++ G  + +++++A 
Sbjct: 121 EERKTVDELDNLI---DKIADVRVLVHTNPKLTCLPKKKPEVLEIRIGGKDIQERLNYAK 177

Query: 185 GFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPRKTHRGL-RKVACIGA 242
               K++ I  VF + E +D I +TKGKG++G V RWGV  +  +   +G+ R V  IG 
Sbjct: 178 EILGKKVSITDVFSEGEFVDTIAITKGKGFQGQVKRWGVKIQFGKHQRKGVGRHVGSIGP 237

Query: 243 WHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
           W P RV +TV   GQ GYH RTE NK+I K+G   +E
Sbjct: 238 WTPKRVMWTVPMPGQMGYHQRTEYNKRILKIGNNGEE 274


>gi|3642669|gb|AAC36524.1| ribosomal protein L3, partial [Mus musculus]
          Length = 117

 Score =  174 bits (442), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 78/108 (72%), Positives = 96/108 (88%)

Query: 169 IQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR 228
           IQVNGG+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW   +LPR
Sbjct: 1   IQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPR 60

Query: 229 KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA 276
           KTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+ 
Sbjct: 61  KTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 108


>gi|240104060|ref|YP_002960369.1| 50S ribosomal protein L3P [Thermococcus gammatolerans EJ3]
 gi|259709743|sp|C5A286.1|RL3_THEGJ RecName: Full=50S ribosomal protein L3P
 gi|239911614|gb|ACS34505.1| LSU ribosomal protein L3P (rpl3P) [Thermococcus gammatolerans EJ3]
          Length = 346

 Score =  174 bits (441), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 107/276 (38%), Positives = 147/276 (53%), Gaps = 10/276 (3%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   PR GSL F PRKRA     ++K +PKD      R+  F GYKAGMTHI+   + PG
Sbjct: 3   KVHRPRRGSLAFSPRKRARSVVPRIKKWPKDSE---VRMLGFAGYKAGMTHILMIDDSPG 59

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRR---FYKN 121
                KE    VTI+E PPL V G+  Y +   GL +   VW   LN+ V+RR     KN
Sbjct: 60  LT-KGKEIFVPVTIVEVPPLFVYGIRAYKQGYLGLETATEVWFHELNDNVKRRIKTLPKN 118

Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVD 181
           + +   KA     +    D    D++  L   + +   ++KK  +ME  + G  V  K +
Sbjct: 119 YGEEDFKAKLGQLEDLVNDGEIVDVRL-LVHTQPWLIKLKKKPEVMEYAIGGDDVKAKFE 177

Query: 182 FAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVAC 239
           +A     K+I    V  + E++D+I VTKGKG +G V RWGV     K  R    R +  
Sbjct: 178 YAKERIGKEIRASEVLHEGELLDVIAVTKGKGTQGPVKRWGVKVQFHKAQRAGKGRHIGN 237

Query: 240 IGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK 275
           +G WHPARV +TV +AGQ G+HHRTE NK++  +G+
Sbjct: 238 LGPWHPARVMWTVPQAGQMGFHHRTEFNKRLIAIGE 273


>gi|333987679|ref|YP_004520286.1| 50S ribosomal protein L3 [Methanobacterium sp. SWAN-1]
 gi|333825823|gb|AEG18485.1| ribosomal protein L3 [Methanobacterium sp. SWAN-1]
          Length = 336

 Score =  174 bits (441), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 105/276 (38%), Positives = 152/276 (55%), Gaps = 14/276 (5%)

Query: 8   HPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKL 67
            PR GS+ F PRKRA+    ++ A+P+ + +  C L  F GYK GMTHI     +  S  
Sbjct: 6   QPRKGSVAFSPRKRAASETPRITAWPETEEA--C-LLGFPGYKVGMTHITMLDSRKSSPT 62

Query: 68  HKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFY---KNWCK 124
              E    VTI+E PP+VV+G+  Y +  RGL++L  + A  L+E+++R      +N  +
Sbjct: 63  EGMEISTPVTILEAPPIVVMGIRAYRQDTRGLKTLADILANDLDEDLQRTISLPKENDLE 122

Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAY 184
           +K K F       E  D   DI+  +    +  +V +KK  ++E  V G +VA+K+D+A 
Sbjct: 123 AKLKDFK------EKMDEIVDIRVLVHTKPRLASVPKKKPEILECGVGGKTVAEKLDYAV 176

Query: 185 GFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGA 242
               K++    VF   E  D I +TKGKG++G V R+G+     K  R    R V  IG 
Sbjct: 177 SVLGKELNPSDVFADGEHTDSIAITKGKGFQGPVKRFGIRIQYGKAARSSKERHVGSIGP 236

Query: 243 WHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ 278
           W+P+R  +TVA AGQ GYH RTE NKKI K+G A +
Sbjct: 237 WNPSRTMWTVAMAGQMGYHKRTEFNKKILKIGGADE 272


>gi|433420037|ref|ZP_20405423.1| 50S ribosomal protein L3P [Haloferax sp. BAB2207]
 gi|448545986|ref|ZP_21626313.1| 50S ribosomal protein L3P [Haloferax sp. ATCC BAA-646]
 gi|448548060|ref|ZP_21627404.1| 50S ribosomal protein L3P [Haloferax sp. ATCC BAA-645]
 gi|448557083|ref|ZP_21632518.1| 50S ribosomal protein L3P [Haloferax sp. ATCC BAA-644]
 gi|448569070|ref|ZP_21638482.1| 50S ribosomal protein L3P [Haloferax lucentense DSM 14919]
 gi|448600511|ref|ZP_21656007.1| 50S ribosomal protein L3P [Haloferax alexandrinus JCM 10717]
 gi|432199294|gb|ELK55485.1| 50S ribosomal protein L3P [Haloferax sp. BAB2207]
 gi|445703332|gb|ELZ55263.1| 50S ribosomal protein L3P [Haloferax sp. ATCC BAA-646]
 gi|445714762|gb|ELZ66520.1| 50S ribosomal protein L3P [Haloferax sp. ATCC BAA-645]
 gi|445714952|gb|ELZ66709.1| 50S ribosomal protein L3P [Haloferax sp. ATCC BAA-644]
 gi|445725220|gb|ELZ76845.1| 50S ribosomal protein L3P [Haloferax lucentense DSM 14919]
 gi|445735228|gb|ELZ86780.1| 50S ribosomal protein L3P [Haloferax alexandrinus JCM 10717]
          Length = 338

 Score =  174 bits (440), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 101/279 (36%), Positives = 151/279 (54%), Gaps = 12/279 (4%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GS+GF PRKRA +   ++K++P DD S    L  F GYKAGMTH++   ++  S   
Sbjct: 7   PRKGSMGFSPRKRAVKEVPRIKSWPSDDGS--PALQGFAGYKAGMTHVMMVNDEADSPRE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRF---YKNWCKS 125
             E    VT++ETPP+  V +  Y +TP G++    VWA   ++E+ R      ++   S
Sbjct: 65  GMEESVPVTVVETPPMRAVALRAYEQTPYGMKPQTEVWAGEFHDELDRVLDLPAEDTFDS 124

Query: 126 KKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYG 185
              A  +  +  E DD +        ++     V +KK  +ME +V GGS+ ++ DFA  
Sbjct: 125 DADALREAVEAGEVDDLRVITHTVPSEL---ANVPKKKPDVMETRVGGGSMVERADFALD 181

Query: 186 FFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIG 241
              +  +  +  VF+  E +D  GVTKGKG +G V RWGV +   K  R    R++  +G
Sbjct: 182 LVAEGGEHEMSDVFRAGEYLDAAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLG 241

Query: 242 AWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
            W+P+RV  TV + GQ GYH RTE+NK++  LG+    S
Sbjct: 242 PWNPSRVRSTVPQLGQTGYHQRTELNKRLIDLGEGDDAS 280


>gi|448606195|ref|ZP_21658774.1| 50S ribosomal protein L3P [Haloferax sulfurifontis ATCC BAA-897]
 gi|448623080|ref|ZP_21669729.1| 50S ribosomal protein L3P [Haloferax denitrificans ATCC 35960]
 gi|445739612|gb|ELZ91119.1| 50S ribosomal protein L3P [Haloferax sulfurifontis ATCC BAA-897]
 gi|445753588|gb|EMA05005.1| 50S ribosomal protein L3P [Haloferax denitrificans ATCC 35960]
          Length = 338

 Score =  174 bits (440), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 101/279 (36%), Positives = 151/279 (54%), Gaps = 12/279 (4%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GS+GF PRKRA +   ++K++P DD S    L  F GYKAGMTH++   ++  S   
Sbjct: 7   PRKGSMGFSPRKRAVKEVPRIKSWPSDDGS--PALQGFAGYKAGMTHVMMVNDEADSPRE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRF---YKNWCKS 125
             E    VT++ETPP+  V +  Y +TP G++    VWA   ++E+ R      ++   S
Sbjct: 65  GMEESVPVTVVETPPMRAVALRAYEQTPYGMKPQTEVWAGEFHDELDRVLDLPAEDTFDS 124

Query: 126 KKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYG 185
              A  +  +  E DD +        ++     V +KK  +ME +V GGS+ ++ DFA  
Sbjct: 125 DADALREAVEAGEVDDLRVITHTVPSEL---ANVPKKKPDVMETRVGGGSMVERADFALD 181

Query: 186 FFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIG 241
              +  +  +  VF+  E +D  GVTKGKG +G V RWGV +   K  R    R++  +G
Sbjct: 182 LVAEGGEHEMSDVFRAGEYLDAAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLG 241

Query: 242 AWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
            W+P+RV  TV + GQ GYH RTE+NK++  LG+    S
Sbjct: 242 PWNPSRVRSTVPQLGQTGYHQRTELNKRLIDLGEGDDAS 280


>gi|297619637|ref|YP_003707742.1| 50S ribosomal protein L3 [Methanococcus voltae A3]
 gi|297378614|gb|ADI36769.1| ribosomal protein L3 [Methanococcus voltae A3]
          Length = 333

 Score =  174 bits (440), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 100/281 (35%), Positives = 155/281 (55%), Gaps = 18/281 (6%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   PR GSL F PRKRA R   K++++P D+     RL A+  YKAG+TH +     P 
Sbjct: 4   KKNRPRRGSLAFSPRKRAKRIVPKIRSWPVDEK---VRLQAYPVYKAGVTHALYVENNPK 60

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
           S   ++E    VT++ETP + + G+  Y K   GL+ L  VWA  L++E+ R+       
Sbjct: 61  SPNAEQEVASPVTVLETPNITIAGIRVYKKDTNGLKVLTEVWAPELDQELARKL------ 114

Query: 125 SKKKAFTKYTKKYETDDGK----KDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKV 180
                  K  K  +T D       D++  +  + K   + +KK  ++EI+V G SV +++
Sbjct: 115 ---TVAKKELKSVDTLDSLINEIVDVRVIVYTIPKETAIAKKKPEVVEIRVGGSSVDERL 171

Query: 181 DFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPRKTHRGL-RKVA 238
           ++A G   +++ I+ VF+  E+ID + VTKGKG++G V RWG+  +  +   +G+ R   
Sbjct: 172 NYAKGILGQKLSINDVFEAGEIIDTVAVTKGKGFQGSVKRWGIKIQFGKHQRKGVGRHTG 231

Query: 239 CIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
            IG W P RV ++V   GQ G+H RTE NK+I+K+G    E
Sbjct: 232 SIGPWRPRRVMWSVPLPGQMGFHQRTEYNKRIFKIGAEGTE 272


>gi|409096184|ref|ZP_11216208.1| 50S ribosomal protein L3P [Thermococcus zilligii AN1]
          Length = 346

 Score =  173 bits (439), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 102/271 (37%), Positives = 147/271 (54%), Gaps = 8/271 (2%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSL + PRKRA     K++ +P+D      R+  F GYKAGMTHI+   + PG    
Sbjct: 7   PRRGSLAYSPRKRARSIVPKIRNWPEDSE---VRMLGFAGYKAGMTHILMIDDNPGLT-K 62

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
            KE    VTI+E PPL V G+  Y +   GL +   VW   LN+ VRRR         ++
Sbjct: 63  GKEIFAPVTIVEVPPLFVYGIRAYRQGYLGLETATEVWFHKLNDHVRRRIKTLPKDYSEE 122

Query: 129 AFTKYTKKYE--TDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGF 186
           AF     + E   ++G+      L   + +   ++KK  +ME  + G  +A K ++A   
Sbjct: 123 AFQARLGQLEDLVNEGEVVDVRLLVHTQPWLIGLKKKPEVMEYAIGGNDIAAKFEYAKER 182

Query: 187 FEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGAWH 244
             ++I    V  + E++D++ VTKGKG +G V RWGV     K  R    R V  +G WH
Sbjct: 183 IGREIRASEVLHEGELLDVVAVTKGKGTQGPVKRWGVKIQFHKAQRAGKGRHVGNLGPWH 242

Query: 245 PARVSFTVARAGQNGYHHRTEMNKKIYKLGK 275
           PARV +TV +AGQ G+HHRTE+NK++  +G+
Sbjct: 243 PARVMWTVPQAGQTGFHHRTELNKRLIAIGE 273


>gi|300710375|ref|YP_003736189.1| 50S ribosomal protein L3P [Halalkalicoccus jeotgali B3]
 gi|448294699|ref|ZP_21484778.1| 50S ribosomal protein L3P [Halalkalicoccus jeotgali B3]
 gi|299124058|gb|ADJ14397.1| 50S ribosomal protein L3P [Halalkalicoccus jeotgali B3]
 gi|445586376|gb|ELY40658.1| 50S ribosomal protein L3P [Halalkalicoccus jeotgali B3]
          Length = 337

 Score =  173 bits (439), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 101/273 (36%), Positives = 152/273 (55%), Gaps = 11/273 (4%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLGF PR RA+    +  ++P DD  +P  L  F GYKAGM+H+V   ++  S L 
Sbjct: 7   PRKGSLGFGPRTRATSEVPRFNSWPDDD-GQPA-LQGFAGYKAGMSHVVMVNDEANSPLE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VTI+ETPP+  V +  Y +T  G++    VWA+  ++E+ R        S+  
Sbjct: 65  GTEQTVPVTIVETPPMRAVALRAYEQTAYGMQPRGEVWAEEFDDELDRALD---LPSEAD 121

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCT--VIRKKAHLMEIQVNGGSVAQKVDFAYGF 186
              +   +   ++GK D    +          V +KK  +ME +V GGS+A++ +FA+G 
Sbjct: 122 PSARDDLETALEEGKVDDLRVITHTSPASLRGVPKKKPDVMETRVGGGSLAERAEFAFGL 181

Query: 187 FEKQIPIDA--VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGA 242
            ++    +A  VF+  E +D+ GVTKGKG +G V RWGV +   K  R    R++  +G 
Sbjct: 182 LDEGGEHEATDVFRAGEYLDVSGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGP 241

Query: 243 WHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK 275
           W+P+RV  TV + GQ GYH RTE+NK++  LG+
Sbjct: 242 WNPSRVRSTVPQQGQTGYHQRTELNKRLLALGE 274


>gi|292656685|ref|YP_003536582.1| 50S ribosomal protein L3 [Haloferax volcanii DS2]
 gi|448290689|ref|ZP_21481835.1| 50S ribosomal protein L3P [Haloferax volcanii DS2]
 gi|291372463|gb|ADE04690.1| ribosomal protein L3 [Haloferax volcanii DS2]
 gi|445578060|gb|ELY32475.1| 50S ribosomal protein L3P [Haloferax volcanii DS2]
          Length = 338

 Score =  173 bits (438), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 101/279 (36%), Positives = 151/279 (54%), Gaps = 12/279 (4%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GS+GF PRKRA +   ++K++P DD S    L  F GYKAGMTH++   ++  S   
Sbjct: 7   PRKGSMGFSPRKRAVKEVPRIKSWPSDDGS--PALQGFAGYKAGMTHVMMVNDEADSPHE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRF---YKNWCKS 125
             E    VT++ETPP+  V +  Y +TP G++    VWA   ++E+ R      ++   S
Sbjct: 65  GMEESVPVTVVETPPMRAVALRAYEQTPYGMKPQTEVWAGEFHDELDRVLDLPAEDTFDS 124

Query: 126 KKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYG 185
              A  +  +  E DD +        ++     V +KK  +ME +V GGS+ ++ DFA  
Sbjct: 125 DADALREAVEAGEVDDLRVITHTVPSEL---ANVPKKKPDVMETRVGGGSMVERADFALD 181

Query: 186 FFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIG 241
              +  +  +  VF+  E +D  GVTKGKG +G V RWGV +   K  R    R++  +G
Sbjct: 182 LVAEGGEHEMSDVFRAGEYLDAAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLG 241

Query: 242 AWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
            W+P+RV  TV + GQ GYH RTE+NK++  LG+    S
Sbjct: 242 PWNPSRVRSTVPQLGQTGYHQRTELNKRLIDLGEGDDAS 280


>gi|374635578|ref|ZP_09707174.1| ribosomal protein L3 [Methanotorris formicicus Mc-S-70]
 gi|373561880|gb|EHP88105.1| ribosomal protein L3 [Methanotorris formicicus Mc-S-70]
          Length = 335

 Score =  172 bits (437), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 103/277 (37%), Positives = 151/277 (54%), Gaps = 8/277 (2%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   PR GSL F PRKRA R   +++++P++D     RL AF  YKAGM+H +     P 
Sbjct: 4   KRNRPRRGSLAFSPRKRAKRPVPRIRSWPEEDK---VRLQAFPVYKAGMSHALVKENNPK 60

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
           S    +E    +TI+E P + V G+  Y K  RGL++L  VWA  L+EE+ R+       
Sbjct: 61  SPNANQEVFTPITILEAPDINVFGIRVYGKDTRGLKTLTEVWADELDEELARKIK---TL 117

Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAY 184
            KK+      +     D   D++  +    K  T+ +KK  ++EI++ G  + +++++A 
Sbjct: 118 PKKEEKKTVEELDSLVDKIVDVRVLVHTNPKNTTLPKKKPEVLEIRIGGKDIQERLNYAK 177

Query: 185 GFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGA 242
               K++ I  VF + E +D I VTKGKG++G V RWGV     K  R    R V  IG 
Sbjct: 178 EILGKKLSITDVFSEGEFVDAIAVTKGKGFQGQVKRWGVKIQFGKHQRKSVGRHVGSIGP 237

Query: 243 WHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
           W P R+ +TV   GQ GYH RTE NK+I K+G + +E
Sbjct: 238 WTPKRIMWTVPMPGQMGYHQRTEYNKRILKIGNSGEE 274


>gi|432328989|ref|YP_007247133.1| archaeal ribosomal protein L3 [Aciduliprofundum sp. MAR08-339]
 gi|432135698|gb|AGB04967.1| archaeal ribosomal protein L3 [Aciduliprofundum sp. MAR08-339]
          Length = 340

 Score =  172 bits (437), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 100/274 (36%), Positives = 153/274 (55%), Gaps = 9/274 (3%)

Query: 8   HPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKL 67
           HPR GS+ + PRKRA+    +++ +P  D     R+  F GYKAGMTH+     +  +  
Sbjct: 6   HPRRGSMAYYPRKRAASPVPRIRTWP--DIEDGPRIQGFAGYKAGMTHVFTVDWRKHTTT 63

Query: 68  HKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKK 127
             +E    VT+IE PP+ V GV  Y +T  GLRS+  VW ++L+ E+ RRF      S++
Sbjct: 64  AGQEIWTPVTVIEVPPMKVAGVRFYERTIYGLRSIGEVWDENLDRELSRRFPLPKEYSEE 123

Query: 128 KAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKA-HLMEIQVNGGSVAQKVDFAYGF 186
            A ++     E      DI+  +    +  + I KKA  +MEI+V GG+V ++ D+A   
Sbjct: 124 VALSRIKGDIE------DIRLIVHTQPRLVSGIPKKAPDIMEIRVGGGTVEERKDYALNL 177

Query: 187 FEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPA 246
             K+I       + + +D++ +TKGKG++G V R+GV  L +K  +  R +  +G WHP 
Sbjct: 178 LGKEIKFSDFKSEGKFVDVVAITKGKGFQGHVKRFGVKLLHQKNRKHRRMIGTLGPWHPD 237

Query: 247 RVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
            V +TV +AGQ GYH RTE NK+I K     +E+
Sbjct: 238 WVRYTVPQAGQMGYHQRTEYNKRIIKYVDFVEEN 271


>gi|289191591|ref|YP_003457532.1| 50S ribosomal protein L3 [Methanocaldococcus sp. FS406-22]
 gi|288938041|gb|ADC68796.1| ribosomal protein L3 [Methanocaldococcus sp. FS406-22]
          Length = 335

 Score =  172 bits (437), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 101/278 (36%), Positives = 154/278 (55%), Gaps = 12/278 (4%)

Query: 6   FEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGS 65
              PR GSL F PRKRA R   +++++P+++     RL AF  YKAGM+H     + P S
Sbjct: 5   INRPRRGSLAFSPRKRAKRPVPRIRSWPEEET---VRLQAFPVYKAGMSHAFIKEDNPKS 61

Query: 66  KLHKKETCEAVTIIETPPLVVVGVVGYVKTPRG-LRSLCTVWAQHLNEEVRRRFYKNWCK 124
               +E    +TI+E PP+ V  +  Y +  R  L +L  VWA +L++E+ R+      K
Sbjct: 62  PNAGQEIFTPITILEAPPINVCAIRVYGRNERNYLTTLTEVWADNLDKELERKI-----K 116

Query: 125 SKKKAFTKYTKKYET-DDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFA 183
             KK   K  +  E   D  +D++  +    K   + +KK  ++EI++ G  + +++++A
Sbjct: 117 LPKKEDRKTVEDLEALKDKIEDVRVLVHTNPKLTCLPKKKPEILEIRIGGKDIEERLNYA 176

Query: 184 YGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPRKTHRGL-RKVACIG 241
                KQ+ I  VFQ+ E++D IGVTKGKG++G V RWGV  +  +   +G+ R V  IG
Sbjct: 177 KEILGKQLNITDVFQEGELVDTIGVTKGKGFQGQVKRWGVKIQFGKHARKGVGRHVGSIG 236

Query: 242 AWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
            W P  V ++V   GQ GYH RTE NK+I K+G    E
Sbjct: 237 PWQPKMVMWSVPMPGQMGYHQRTEYNKRILKIGNNGDE 274


>gi|148642822|ref|YP_001273335.1| 50S ribosomal protein L3P [Methanobrevibacter smithii ATCC 35061]
 gi|222445053|ref|ZP_03607568.1| hypothetical protein METSMIALI_00670 [Methanobrevibacter smithii
           DSM 2375]
 gi|261350378|ref|ZP_05975795.1| ribosomal protein L3 [Methanobrevibacter smithii DSM 2374]
 gi|166233159|sp|A5UL89.1|RL3_METS3 RecName: Full=50S ribosomal protein L3P
 gi|148551839|gb|ABQ86967.1| ribosomal protein L3p [Methanobrevibacter smithii ATCC 35061]
 gi|222434618|gb|EEE41783.1| archaeal ribosomal protein L3 [Methanobrevibacter smithii DSM 2375]
 gi|288861161|gb|EFC93459.1| ribosomal protein L3 [Methanobrevibacter smithii DSM 2374]
          Length = 336

 Score =  172 bits (437), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 100/274 (36%), Positives = 151/274 (55%), Gaps = 10/274 (3%)

Query: 8   HPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTH-IVRDVEKPGSK 66
            PR GS+ F PRKRA++   ++K++P++D  K   L    GYK GMTH +V D +K  S 
Sbjct: 6   QPRKGSVAFSPRKRAAKETPRIKSWPQNDEPK---LLGLAGYKVGMTHALVTDSDK-NSP 61

Query: 67  LHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSK 126
            +  +    VT++E PP+VV+G+  Y KT RGL+ +  V A +L+EE+ R+       +K
Sbjct: 62  TNGMDVFTPVTVLEVPPVVVMGIRAYEKTSRGLKVITEVLADNLDEELSRKISLPKEYNK 121

Query: 127 KKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGF 186
            +A  K        D  +DI+  +    K  +V +KK  + E  + G +  +K++ A   
Sbjct: 122 SEAIAKIQGVL---DKTEDIKVLVHTNPKVTSVPKKKPDIFECGIGGANPEEKLNTALEL 178

Query: 187 FEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAWH 244
              ++    +  + + +D I  TKGKG++GVV RWG+     K  R    R V  IG W 
Sbjct: 179 LGNEVKASDILNEGQFVDAIATTKGKGFQGVVKRWGIRIQYGKAVRAGKGRHVGSIGPWT 238

Query: 245 PARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ 278
           P+R  +TVA+AGQ GYH RTE NKKI K+  A +
Sbjct: 239 PSRTMWTVAQAGQMGYHKRTEFNKKILKIASADE 272


>gi|432102535|gb|ELK30106.1| 60S ribosomal protein L3-like protein [Myotis davidii]
          Length = 227

 Score =  172 bits (437), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 82/147 (55%), Positives = 112/147 (76%), Gaps = 9/147 (6%)

Query: 161 RKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTR 220
           +KKAH+MEIQ+NGG+VA+KV +A    EKQ+P+ +VF + E+ID+I VTKG+G +GV +R
Sbjct: 8   QKKAHIMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGIKGVTSR 67

Query: 221 WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           W   +LPRKTH+GLRKVACIGAWHPARV  ++ARAGQ GYHHRTE+NKKIY++G+   + 
Sbjct: 68  WHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGFHKE 127

Query: 281 ------HSAMTEF---DRSVYLLSSLM 298
                 ++A T +   D+S+  LS L+
Sbjct: 128 DGKVVKNNASTSYDLTDKSITPLSLLV 154


>gi|327400872|ref|YP_004341711.1| 50S ribosomal protein L3 [Archaeoglobus veneficus SNP6]
 gi|327316380|gb|AEA46996.1| ribosomal protein L3 [Archaeoglobus veneficus SNP6]
          Length = 329

 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/276 (37%), Positives = 151/276 (54%), Gaps = 13/276 (4%)

Query: 7   EH-PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGS 65
           EH PR GSLGF PRKRAS    +++A+P+       RL  F GYK GMTH+V   ++  S
Sbjct: 3   EHRPRRGSLGFSPRKRASSIVPRIRAWPE---CSETRLLGFAGYKVGMTHVVMVDDRKNS 59

Query: 66  KLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKS 125
             + +E    VT+IETPP+ V G+  Y KTP G++    VW+  L+  + RR        
Sbjct: 60  LTYGEEIVVPVTVIETPPMKVAGIRVYRKTPYGMQIAGEVWSSDLDNFLGRRL------Q 113

Query: 126 KKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYG 185
             K      K  E DD  +       +      + +K   +ME +V GG V+  +D+A  
Sbjct: 114 LPKKSPDVEKLKEIDDAAEVRVITYTQPYLITGIPKKVPDVMEHKV-GGDVSSALDYAIE 172

Query: 186 FFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGAW 243
              K+I +  V+ +  +ID++ +TKGKG++G V RWGV  L  K  R    R+V C+G W
Sbjct: 173 KLGKEIRVSEVYSEGAIIDVLSITKGKGFQGPVKRWGVITLDAKHARSSKHRRVGCLGPW 232

Query: 244 HPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
           +P  + +TV +AGQ G+H RTE NK+I K+G+   E
Sbjct: 233 NPHHIRWTVPQAGQMGFHQRTEFNKRIIKIGEDGSE 268


>gi|448704116|ref|ZP_21700597.1| 50S ribosomal protein L3P [Halobiforma nitratireducens JCM 10879]
 gi|445796505|gb|EMA47009.1| 50S ribosomal protein L3P [Halobiforma nitratireducens JCM 10879]
          Length = 339

 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/287 (35%), Positives = 148/287 (51%), Gaps = 31/287 (10%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLGF PRKRAS    +  ++P  D  +P  L  F GYKAGMTH+V   +K  S   
Sbjct: 7   PRKGSLGFGPRKRASSEVPRFNSWPDTD-GQPT-LQGFAGYKAGMTHVVMVDDKSNSPTE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VTI+ETPP+  V +  Y  TP G+  +  VW     +E+ R            
Sbjct: 65  GMEQTVPVTIVETPPMRAVALRAYEDTPYGMNPVTEVWTDEFADELDR------------ 112

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMK-------------KYCTVIRKKAHLMEIQVNGGS 175
                   Y++D  + +++  LE+ +             +  +V +KK  +ME +V GGS
Sbjct: 113 VLDLPGDDYDSDAAEDELRGLLEEGRVDDVRAITHTVPSEVPSVPKKKPDVMETRVGGGS 172

Query: 176 VAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 233
           V ++VDF     E   +  ++ VF+  E +D  GVTKGKG +G V RWGV +   K  R 
Sbjct: 173 VEERVDFGLDLLENGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHARQ 232

Query: 234 --LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ 278
              R++  +G W+P+RV  TV + GQ GYH RTE+NK++  +G  + 
Sbjct: 233 GWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGNGAD 279


>gi|433638933|ref|YP_007284693.1| archaeal ribosomal protein L3 [Halovivax ruber XH-70]
 gi|433290737|gb|AGB16560.1| archaeal ribosomal protein L3 [Halovivax ruber XH-70]
          Length = 340

 Score =  172 bits (435), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/281 (35%), Positives = 151/281 (53%), Gaps = 14/281 (4%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLGF PRKRA+    + +++P DD  +P  L  F GYKAGMTH+V   +   S   
Sbjct: 7   PRKGSLGFGPRKRATSEVPRFRSWPDDD-GQPT-LQGFAGYKAGMTHVVTVDDAANSPTE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRF----YKNWCK 124
             ET   VTI+ETPP+ +  +  Y ++P G + +  VWA  L++E+ R            
Sbjct: 65  GMETTVPVTIVETPPMAIAALRAYEESPYGQQPVAEVWADELDDELERTLDLPGDDYDRD 124

Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAY 184
           +    FT   +    DD +       ++++   +V + K  +ME ++ GGSV  +V+F  
Sbjct: 125 AAADEFTAALEAGRVDDVRAITYTTPDEIQ---SVPKTKPDVMETRIGGGSVDDRVEFGL 181

Query: 185 GFFEK---QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVAC 239
              E    +  ++ VF+  E +D  GVTKGKG +G V RWGV +   K  R    R++  
Sbjct: 182 DLLEADGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGN 241

Query: 240 IGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           +G W+P+RV  TV + GQ GYH RTE+NK++  +G  +  +
Sbjct: 242 LGPWNPSRVRSTVPQQGQTGYHQRTELNKRLLAIGDGADAT 282


>gi|448338134|ref|ZP_21527186.1| 50S ribosomal protein L3P [Natrinema pallidum DSM 3751]
 gi|445623309|gb|ELY76731.1| 50S ribosomal protein L3P [Natrinema pallidum DSM 3751]
          Length = 339

 Score =  172 bits (435), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 101/277 (36%), Positives = 147/277 (53%), Gaps = 7/277 (2%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLGF PR+RA+    +  ++P DD  +P  L  F GYKAGMTH+V   +K  S   
Sbjct: 7   PRKGSLGFGPRQRATSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDKANSPTE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VTI+ETPP+  V +  Y  TP G++ +  VW      E+ R       +    
Sbjct: 65  GMEETVPVTIVETPPMRAVALRAYEDTPYGMKPITEVWTDEFVPELDRVLDLPGDEYDTD 124

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMK-KYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGFF 187
           A T   +  + +    D++     +     +V +KK  +ME +V GGSV  +VDFA    
Sbjct: 125 AATDELRGLQEEGRVDDVRVITHTVPGDVPSVPKKKPDVMETRVGGGSVGDRVDFALEII 184

Query: 188 EK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAW 243
           E   +  ++ VF+  E +D  GVTKGKG +G V RWGV +   K  R    R++  +G W
Sbjct: 185 EDGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW 244

Query: 244 HPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           +P+RV  TV + GQ GYH RTE+NK++  +G  +  +
Sbjct: 245 NPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGADAT 281


>gi|330508498|ref|YP_004384926.1| 50S ribosomal protein L3 [Methanosaeta concilii GP6]
 gi|328929306|gb|AEB69108.1| ribosomal protein L3 [Methanosaeta concilii GP6]
          Length = 334

 Score =  172 bits (435), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 97/269 (36%), Positives = 145/269 (53%), Gaps = 10/269 (3%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSL + PRKRA     +++++ ++D     R+  F GYKAGMTH++   ++P S   
Sbjct: 7   PRRGSLAYSPRKRAKSEVPRIRSWLEEDK---ARIAGFAGYKAGMTHVMMIDDRPRSLTE 63

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VT++E PP+ VV V  Y     GLR    +WA++L+ E+ R         KK 
Sbjct: 64  GMEISTPVTVLEVPPMNVVAVRAYESYNGGLRPAGELWAENLSPELSRAM----TVPKKT 119

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKA-HLMEIQVNGGSVAQKVDFAYGFF 187
             T         D   D++  +       + I KK   +ME+ +NGGS+  ++ FA    
Sbjct: 120 RGTAPGDLVALGDDIADVRVLVHTNPTLVSGIPKKVPEIMEMPINGGSMNDRLSFAQTLL 179

Query: 188 EKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAWHP 245
            +Q+PI +VF+  +++D   VTKGKG +G V RWG+    RK  R   +R V  +G WHP
Sbjct: 180 GQQVPISSVFELGDLMDTSAVTKGKGTQGPVRRWGIAMAKRKHARTGKVRHVGNLGPWHP 239

Query: 246 ARVSFTVARAGQNGYHHRTEMNKKIYKLG 274
           A +S+ V + GQ GYH RTE NK++  +G
Sbjct: 240 AHISWRVPQLGQMGYHQRTEYNKRLMFIG 268


>gi|340624855|ref|YP_004743308.1| 50S ribosomal protein L3P [Methanococcus maripaludis X1]
 gi|339905123|gb|AEK20565.1| 50S ribosomal protein L3P [Methanococcus maripaludis X1]
          Length = 334

 Score =  172 bits (435), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 103/277 (37%), Positives = 151/277 (54%), Gaps = 9/277 (3%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   PR GSL F PRKRA +   K++++P D   K   L AF  YKAG TH +     P 
Sbjct: 4   KKNRPRRGSLAFSPRKRAKKLVPKIRSWPAD---KKVGLQAFPVYKAGTTHALLIENNPK 60

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
           S    +E    VT++ETP + V G+  Y KT +GL++L  VWA+ L+ ++ R+      K
Sbjct: 61  SPNSSQEVFTPVTVLETPDVTVAGIRLYEKTTKGLKALTEVWAEQLDSDLGRKLTLA-KK 119

Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAY 184
            +KK         E      +++A +    K   + +KK  ++EI+V G SVA+++ +A 
Sbjct: 120 EEKKTVDALDAVLEKAT---EVRAIVHTNPKTTGIPKKKPEVVEIRVGGSSVAERLAYAK 176

Query: 185 GFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPRKTHRGL-RKVACIGA 242
               K + I  VF+  E+ID + +TKGKG++G V RWG+  +  +   +G+ R    IG 
Sbjct: 177 EILGKTLAISDVFEAGEIIDTLAITKGKGFQGSVKRWGIKVQFGKHQRKGVGRHTGSIGP 236

Query: 243 WHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
           W P RV +TV   GQ G+H RTE NK+I KLG    E
Sbjct: 237 WRPRRVMWTVPLPGQMGFHQRTEYNKRILKLGSEGAE 273


>gi|11499509|ref|NP_070750.1| 50S ribosomal protein L3P [Archaeoglobus fulgidus DSM 4304]
 gi|3914742|sp|O28354.1|RL3_ARCFU RecName: Full=50S ribosomal protein L3P
 gi|2648621|gb|AAB89331.1| LSU ribosomal protein L3P (rpl3P) [Archaeoglobus fulgidus DSM 4304]
          Length = 331

 Score =  171 bits (434), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 103/278 (37%), Positives = 155/278 (55%), Gaps = 12/278 (4%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K+  PR GSL F PRKRA     +++A+P+ D     R+  F GYKAGMTH+V   ++  
Sbjct: 2   KYHRPRRGSLAFSPRKRAKSIVPRIRAWPECDR---VRMQGFAGYKAGMTHVVMIDDRKN 58

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
           S  + +E    VT+IETPP+ V  V  Y KT  G++    VW+ +L++ + RR       
Sbjct: 59  SPTYGEEVVVPVTVIETPPMKVAAVRVYKKTQYGMQIAAEVWSNNLDDFLDRRL-----N 113

Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKA-HLMEIQVNGGSVAQKVDFA 183
             KK       K   ++G  +++          T + KK   +ME ++ GG+V + +D+A
Sbjct: 114 LPKKEPDVEKLKAAVENGASEVRVVTYTQPYLITGVPKKVPDVMEHRI-GGNVEEALDYA 172

Query: 184 YGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIG 241
                K+I +  VF +  +ID+I VTKGKG++G V RWGV  L  K  R    R+V  +G
Sbjct: 173 ISKLGKEISVSEVFDEGAIIDVIAVTKGKGFQGPVKRWGVITLDAKHARSSKHRRVGNLG 232

Query: 242 AWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
            W+P  V +TV +AGQ G+H RTE NK++ K+G+  +E
Sbjct: 233 PWNPHHVRWTVPQAGQMGFHQRTEYNKRLIKIGENGEE 270


>gi|45359106|ref|NP_988663.1| 50S ribosomal protein L3P [Methanococcus maripaludis S2]
 gi|74553576|sp|Q6LX10.1|RL3_METMP RecName: Full=50S ribosomal protein L3P
 gi|45047981|emb|CAF31099.1| LSU Ribosomal protein L3P [Methanococcus maripaludis S2]
          Length = 334

 Score =  171 bits (434), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 102/277 (36%), Positives = 151/277 (54%), Gaps = 9/277 (3%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   PR GSL F PRKRA +   K++++P D   K   L AF  YKAG TH +     P 
Sbjct: 4   KKNRPRRGSLAFSPRKRAKKLVPKIRSWPAD---KKVGLQAFPVYKAGTTHALLIENNPK 60

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
           S    +E    VT++ETP + V G+  Y KT +GL++L  VWA+ L+ ++ R+      K
Sbjct: 61  SPNSSQEVFTPVTVLETPDVTVAGIRLYEKTTKGLKALTEVWAEQLDSDLGRKLTLA-KK 119

Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAY 184
            +KK         E      +++A +    K   + +KK  ++EI++ G SVA+++ +A 
Sbjct: 120 EEKKTVDALDAVLEKAT---EVRAIVHTNPKTTGIPKKKPEVVEIRIGGSSVAERLAYAK 176

Query: 185 GFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPRKTHRGL-RKVACIGA 242
               K + I  VF+  E+ID + +TKGKG++G V RWG+  +  +   +G+ R    IG 
Sbjct: 177 EILGKTLAISDVFEAGEIIDTLAITKGKGFQGSVKRWGIKVQFGKHQRKGVGRHTGSIGP 236

Query: 243 WHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
           W P RV +TV   GQ G+H RTE NK+I KLG    E
Sbjct: 237 WRPRRVMWTVPLPGQMGFHQRTEYNKRILKLGSEGAE 273


>gi|14600545|ref|NP_147062.1| 50S ribosomal protein L3 [Aeropyrum pernix K1]
 gi|6685859|sp|Q9YFM2.1|RL3_AERPE RecName: Full=50S ribosomal protein L3P
 gi|5103618|dbj|BAA79139.1| 50S ribosomal protein L3P [Aeropyrum pernix K1]
          Length = 344

 Score =  171 bits (434), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 114/279 (40%), Positives = 155/279 (55%), Gaps = 12/279 (4%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           M  RK   PR GSLGF PRKRASR   +VK +P+ D  KP  L AFLGY+AGMTH+    
Sbjct: 1   MGARKKRAPRRGSLGFSPRKRASRLVPRVKRWPEVDIGKPVPL-AFLGYRAGMTHVFMVD 59

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTP-RGLRSLCTVWAQHLNE-EVRRRF 118
           ++PG     KE    VTI+ETPP+ V  V  Y   P RG  SL   WAQ   E E++RR 
Sbjct: 60  DRPGRPTSGKEIFVPVTIVETPPMFVAAVRLYGYDPNRGRYSLGEAWAQPPPELELQRRI 119

Query: 119 YKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGS-VA 177
                    K      ++ +  +  + I A   K+    +  +KK  L+EI+V G S V 
Sbjct: 120 STLGSFDTDKMLKSLEERLDKAEDVRLIAASQPKLAGGLS--KKKPDLLEIKVGGVSDVT 177

Query: 178 QKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLR 235
           +  D+A       I ++ VF++ +++D+I VTKGKG++GV+ RWGV  LPR  K  +G R
Sbjct: 178 KLFDYAKDVLGNLIAVNDVFEEGQLVDVIAVTKGKGFQGVIKRWGVKELPRWHKHRKGSR 237

Query: 236 KVACIGAWHPARVSF-TVARAGQNGYHHRTEMNKKIYKL 273
           +   IGA    R +F    +AGQ G+H RTE NK+I  +
Sbjct: 238 R---IGARSHGRSTFWETPQAGQTGFHRRTEYNKRILMI 273


>gi|448685260|ref|ZP_21693252.1| 50S ribosomal protein L3P [Haloarcula japonica DSM 6131]
 gi|445781871|gb|EMA32722.1| 50S ribosomal protein L3P [Haloarcula japonica DSM 6131]
          Length = 338

 Score =  171 bits (434), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 100/277 (36%), Positives = 148/277 (53%), Gaps = 8/277 (2%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLGF PRKR++    +  ++P DD  +P  +  F GYKAGMTH+V   ++P S   
Sbjct: 7   PRKGSLGFGPRKRSTSETPRFNSWPSDD-GQPG-VQGFAGYKAGMTHVVLVNDEPNSPRE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VT+IETPP+  V +  Y  TP G R L  VW    + E+ R            
Sbjct: 65  GMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTLDVPEDHDPDA 124

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYC-TVIRKKAHLMEIQVNGGSVAQKVDFAYGFF 187
           A  +    +E  D   D++     +     +V +KK  +ME +V GGSV+ ++D A    
Sbjct: 125 AEEQIRDAHEAGD-LGDLRLITHTVPDAVPSVPKKKPDVMETRVGGGSVSDRLDHALDLV 183

Query: 188 EK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAW 243
           E   +  ++ +F+  E  D+ GVTKGKG +G V RWGV +   K  R    R++  +G W
Sbjct: 184 EDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW 243

Query: 244 HPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           +P+RV  TV + GQ GYH RTE+NK++  +G+  + +
Sbjct: 244 NPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPT 280


>gi|448345585|ref|ZP_21534474.1| 50S ribosomal protein L3P [Natrinema altunense JCM 12890]
 gi|445633518|gb|ELY86705.1| 50S ribosomal protein L3P [Natrinema altunense JCM 12890]
          Length = 339

 Score =  171 bits (433), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 101/277 (36%), Positives = 147/277 (53%), Gaps = 7/277 (2%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLGF PR+RA+    +  ++P DD  +P  L  F GYKAGMTH+V   +K  S   
Sbjct: 7   PRKGSLGFGPRQRATSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDKSNSPTE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VTI+ETPP+  V +  Y  TP G++ +  VW      E+ R       +    
Sbjct: 65  GMEQTVPVTIVETPPMRAVALRAYEDTPYGMKPITEVWTDEFVPELDRVLDLPGDEYDTD 124

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMK-KYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGFF 187
           A T   +  + +    D++     +     +V +KK  +ME +V GGSV  +VDFA    
Sbjct: 125 AATDELRGLQEEGRVDDVRVITHTVPGDVPSVPKKKPDVMETRVGGGSVDDRVDFALEII 184

Query: 188 EK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAW 243
           E   +  ++ VF+  E +D  GVTKGKG +G V RWGV +   K  R    R++  +G W
Sbjct: 185 EDGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW 244

Query: 244 HPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           +P+RV  TV + GQ GYH RTE+NK++  +G  +  +
Sbjct: 245 NPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGADAT 281


>gi|76803057|ref|YP_331152.1| 50S ribosomal protein L3P [Natronomonas pharaonis DSM 2160]
 gi|109893528|sp|Q3IMY8.1|RL3_NATPD RecName: Full=50S ribosomal protein L3P
 gi|76558922|emb|CAI50518.1| 50S ribosomal protein L3 [Natronomonas pharaonis DSM 2160]
          Length = 336

 Score =  171 bits (433), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 98/272 (36%), Positives = 149/272 (54%), Gaps = 11/272 (4%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GS+GF PR RA+    +  ++P DD  +P  L  F GYKAGM+H+V   ++P S   
Sbjct: 7   PRKGSMGFSPRSRAASEVPRFNSWP-DDEGQPG-LQGFAGYKAGMSHVVAINDEPNSPRE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
            +E    VT++ETPP+  V V  Y  TP G R L  VW   ++E++ R         ++ 
Sbjct: 65  GQEETVPVTVVETPPMRAVAVRAYEDTPYGKRPLTEVWTDEVHEDLERSLS---VPEEQS 121

Query: 129 AFTKYTKKYETDDGK-KDIQAQLEKMK-KYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGF 186
              +   +   D+G   D++     +     +V +K+  +ME +V GGS++ +VDFA   
Sbjct: 122 GDIEGDIRTALDEGALADVRVITHTVPGALSSVPKKEPDVMETRVGGGSLSDRVDFALDL 181

Query: 187 FEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGA 242
            +   +  +  VF+  E  D+ G+TKGKG +G V RWGV +   K  R    R++  +G 
Sbjct: 182 VDDGGEHTVTDVFRAGEYTDVAGITKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGP 241

Query: 243 WHPARVSFTVARAGQNGYHHRTEMNKKIYKLG 274
           W+P+RV  TV + GQ GYH RTE+NK++  LG
Sbjct: 242 WNPSRVRSTVPQQGQTGYHQRTELNKRLIDLG 273


>gi|304314253|ref|YP_003849400.1| 50S ribosomal protein L3P [Methanothermobacter marburgensis str.
           Marburg]
 gi|302587712|gb|ADL58087.1| 50S ribosomal protein L3P [Methanothermobacter marburgensis str.
           Marburg]
          Length = 337

 Score =  171 bits (433), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 99/274 (36%), Positives = 148/274 (54%), Gaps = 9/274 (3%)

Query: 8   HPRHGSLGFLPRKRASRHRGKVKAFPK-DDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSK 66
            PR GS+ F PRKRA+R   +VK++P+ D+P     L A  GYKAGMTH++    +  S 
Sbjct: 6   QPRKGSVAFSPRKRAARETPRVKSWPQVDEPG----LLALAGYKAGMTHVMMVDNQKNSP 61

Query: 67  LHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSK 126
               E    VTI+E PPL V+ V  Y KT RGL++L  V A    E++RR+         
Sbjct: 62  TEGMEVSTPVTILEVPPLTVMAVRAYEKTSRGLKTLGEVLATETKEDLRRKLTPPAEDYD 121

Query: 127 KKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGF 186
           ++A  +  +     +   D++  +    +  +V +KK  + E  + G +  +K ++A G 
Sbjct: 122 QEAAIERIR--SNMEYVADVRVIVHTNPRLASVPKKKPEVFECGLGGKTPEEKFEYALGI 179

Query: 187 FEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGAWH 244
             K +    +F +   +D I VTKGKG++G V RWG+     K  R    R +  +G W 
Sbjct: 180 LGKDVRASEIFSEGAFVDAIAVTKGKGFQGPVKRWGIRIQYGKAARSSKGRHIGSLGPWT 239

Query: 245 PARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ 278
           P+R  +TV +AGQ GYH RTE NK+I K+G AS+
Sbjct: 240 PSRTMWTVPQAGQMGYHRRTEYNKQILKIGDASE 273


>gi|448648021|ref|ZP_21679499.1| 50S ribosomal protein L3P [Haloarcula californiae ATCC 33799]
 gi|445775891|gb|EMA26886.1| 50S ribosomal protein L3P [Haloarcula californiae ATCC 33799]
          Length = 338

 Score =  171 bits (433), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 100/277 (36%), Positives = 147/277 (53%), Gaps = 8/277 (2%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLGF PRKR++    +  ++P DD  +P  +  F GYKAGMTH+V   ++P S   
Sbjct: 7   PRKGSLGFGPRKRSTSETPRFNSWPSDD-GQPG-VQGFAGYKAGMTHVVLVNDEPNSPRE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VT+IETPP+  V +  Y  TP G R L  VW    + E+ R            
Sbjct: 65  GMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTLDVPEDHDPDA 124

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYC-TVIRKKAHLMEIQVNGGSVAQKVDFAYGFF 187
           A  +    +E  D   D++     +     +V +KK  +ME +V GGSV+ ++D A    
Sbjct: 125 AEEQIRDAHEAGD-LGDLRLITHTVPDAVPSVPKKKPDVMETRVGGGSVSDRLDHALDLV 183

Query: 188 EK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAW 243
           E   +  ++ +F+  E  D+ GVTKGKG +G V RWGV +   K  R    R++  +G W
Sbjct: 184 EDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW 243

Query: 244 HPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           +P+RV  TV + GQ GYH RTE+NK++  +G   + +
Sbjct: 244 NPSRVRSTVPQQGQTGYHQRTELNKRLIDIGDGDEPT 280


>gi|448630850|ref|ZP_21673305.1| 50S ribosomal protein L3P [Haloarcula vallismortis ATCC 29715]
 gi|445755224|gb|EMA06614.1| 50S ribosomal protein L3P [Haloarcula vallismortis ATCC 29715]
          Length = 338

 Score =  171 bits (432), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 99/277 (35%), Positives = 148/277 (53%), Gaps = 8/277 (2%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GS+GF PRKR++    +  ++P DD  +P  +  F GYKAGMTH+V   ++P S   
Sbjct: 7   PRKGSMGFGPRKRSTSETPRFNSWPSDD-GQPG-VQGFAGYKAGMTHVVLVNDEPNSPRE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VT+IETPP+  V +  Y  TP G R L  VW    + E+ R            
Sbjct: 65  GMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTLDVPEDHDPDA 124

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYC-TVIRKKAHLMEIQVNGGSVAQKVDFAYGFF 187
           A  +    +E  D   D++     +     +V +KK  +ME +V GGSV+ ++D A    
Sbjct: 125 AEEQIRDAHEAGD-LGDLRVITHTVPDAVPSVPKKKPDVMETRVGGGSVSDRLDHALDLV 183

Query: 188 EK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAW 243
           E   +  ++ +F+  E  D+ GVTKGKG +G V RWGV +   K  R    R++  +G W
Sbjct: 184 EDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW 243

Query: 244 HPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           +P+RV  TV + GQ GYH RTE+NK++  +G+  + +
Sbjct: 244 NPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPT 280


>gi|448377806|ref|ZP_21560502.1| 50S ribosomal protein L3P [Halovivax asiaticus JCM 14624]
 gi|445655750|gb|ELZ08595.1| 50S ribosomal protein L3P [Halovivax asiaticus JCM 14624]
          Length = 340

 Score =  171 bits (432), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 101/280 (36%), Positives = 154/280 (55%), Gaps = 12/280 (4%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLGF PRKRA+    + +++P DD  +P  L  F GYKAGMTH+V   +   S   
Sbjct: 7   PRKGSLGFGPRKRATSEVPRFRSWPDDD-GQPT-LQGFAGYKAGMTHVVTVDDAANSPTE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRF-YKNWCKSKK 127
             ET   VTI+ETPP+ +  +  Y ++P G + +  VWA  L++E+ R          + 
Sbjct: 65  GMETTVPVTIVETPPMAIAALRAYEESPYGQQPVAEVWADELDDELERTLDLPGDDYDRD 124

Query: 128 KAFTKYTKKYETDDGK-KDIQA-QLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYG 185
            A  ++T     D+G+  D++A       +  +V + K  +ME ++ GGSV  +V+F   
Sbjct: 125 AAADEFTAAL--DEGRVDDVRAITYTTPGEIQSVPKTKPDVMETRIGGGSVDDRVEFGLD 182

Query: 186 FFEK---QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACI 240
             E    +  ++ VF+  E +D  GVTKGKG +G V RWGV +   K  R    R++  +
Sbjct: 183 LLEADGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNL 242

Query: 241 GAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           G W+P+RV  TV + GQ GYH RTE+NK++  +G  +  +
Sbjct: 243 GPWNPSRVRSTVPQQGQTGYHQRTELNKRLLAIGDGADAT 282


>gi|55378384|ref|YP_136234.1| 50S ribosomal protein L3P [Haloarcula marismortui ATCC 43049]
 gi|344212413|ref|YP_004796733.1| 50S ribosomal protein L3P [Haloarcula hispanica ATCC 33960]
 gi|448636987|ref|ZP_21675435.1| 50S ribosomal protein L3P [Haloarcula sinaiiensis ATCC 33800]
 gi|57015335|sp|P20279.5|RL3_HALMA RecName: Full=50S ribosomal protein L3P; AltName: Full=Hl1;
           AltName: Full=Hmal3
 gi|50513471|pdb|1S72|B Chain B, Refined Crystal Structure Of The Haloarcula Marismortui
           Large Ribosomal Subunit At 2.4 Angstrom Resolution
 gi|66360785|pdb|1YHQ|B Chain B, Crystal Structure Of Azithromycin Bound To The G2099a
           Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
 gi|66360818|pdb|1YI2|B Chain B, Crystal Structure Of Erythromycin Bound To The G2099a
           Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
 gi|66360851|pdb|1YIJ|B Chain B, Crystal Structure Of Telithromycin Bound To The G2099a
           Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
 gi|66360884|pdb|1YIT|B Chain B, Crystal Structure Of Virginiamycin M And S Bound To The
           50s Ribosomal Subunit Of Haloarcula Marismortui
 gi|66360917|pdb|1YJ9|B Chain B, Crystal Structure Of The Mutant 50s Ribosomal Subunit Of
           Haloarcula Marismortui Containing A Three Residue
           Deletion In L22
 gi|66360950|pdb|1YJN|B Chain B, Crystal Structure Of Clindamycin Bound To The G2099a
           Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
 gi|66360983|pdb|1YJW|B Chain B, Crystal Structure Of Quinupristin Bound To The G2099a
           Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
 gi|83753127|pdb|1VQ4|B Chain B, The Structure Of The Transition State Analogue "daa" Bound
           To The Large Ribosomal Subunit Of Haloarcula Marismortui
 gi|83753159|pdb|1VQ5|B Chain B, The Structure Of The Transition State Analogue "raa" Bound
           To The Large Ribosomal Subunit Of Haloarcula Marismortui
 gi|83753191|pdb|1VQ6|B Chain B, The Structure Of C-Hpmn And Cca-Phe-Cap-Bio Bound To The
           Large Ribosomal Subunit Of Haloarcula Marismortui
 gi|83753223|pdb|1VQ7|B Chain B, The Structure Of The Transition State Analogue "dca" Bound
           To The Large Ribosomal Subunit Of Haloarcula Marismortui
 gi|83753254|pdb|1VQ8|B Chain B, The Structure Of Ccda-Phe-Cap-Bio And The Antibiotic
           Sparsomycin Bound To The Large Ribosomal Subunit Of
           Haloarcula Marismortui
 gi|83753286|pdb|1VQ9|B Chain B, The Structure Of Cca-Phe-Cap-Bio And The Antibiotic
           Sparsomycin Bound To The Large Ribosomal Subunit Of
           Haloarcula Marismortui
 gi|83753317|pdb|1VQK|B Chain B, The Structure Of Ccda-Phe-Cap-Bio Bound To The A Site Of
           The Ribosomal Subunit Of Haloarcula Marismortui
 gi|83753348|pdb|1VQL|B Chain B, The Structure Of The Transition State Analogue "dcsn"
           Bound To The Large Ribosomal Subunit Of Haloarcula
           Marismortui
 gi|83753379|pdb|1VQM|B Chain B, The Structure Of The Transition State Analogue "dan" Bound
           To The Large Ribosomal Subunit Of Haloarcula Marismortui
 gi|83753411|pdb|1VQN|B Chain B, The Structure Of Cc-hpmn And Cca-phe-cap-bio Bound To The
           Large Ribosomal Subunit Of Haloarcula Marismortui
 gi|83753442|pdb|1VQO|B Chain B, The Structure Of Ccpmn Bound To The Large Ribosomal
           Subunit Haloarcula Marismortui
 gi|83753474|pdb|1VQP|B Chain B, The Structure Of The Transition State Analogue "rap" Bound
           To The Large Ribosomal Subunit Of Haloarcula Marismortui
 gi|145580174|pdb|2OTJ|B Chain B, 13-Deoxytedanolide Bound To The Large Subunit Of
           Haloarcula Marismortui
 gi|171848838|pdb|2QA4|B Chain B, A More Complete Structure Of The The L7L12 STALK OF THE
           Haloarcula Marismortui 50s Large Ribosomal Subunit
 gi|188596003|pdb|3CC2|B Chain B, The Refined Crystal Structure Of The Haloarcula
           Marismortui Large Ribosomal Subunit At 2.4 Angstrom
           Resolution With Rrna Sequence For The 23s Rrna And
           Genome-Derived Sequences For R-Proteins
 gi|188596034|pdb|3CC4|B Chain B, Co-Crystal Structure Of Anisomycin Bound To The 50s
           Ribosomal Subunit
 gi|188596065|pdb|3CC7|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
           23s Rrna Mutation C2487u
 gi|188596096|pdb|3CCE|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
           23s Rrna Mutation U2535a
 gi|188596127|pdb|3CCJ|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
           23s Rrna Mutation C2534u
 gi|188596158|pdb|3CCL|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
           23s Rrna Mutation U2535c. Density For Anisomycin Is
           Visible But Not Included In Model.
 gi|188596189|pdb|3CCM|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
           23s Rrna Mutation G2611u
 gi|188596220|pdb|3CCQ|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
           23s Rrna Mutation A2488u
 gi|188596251|pdb|3CCR|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
           23s Rrna Mutation A2488c. Density For Anisomycin Is
           Visible But Not Included In The Model.
 gi|188596282|pdb|3CCS|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
           23s Rrna Mutation G2482a
 gi|188596313|pdb|3CCU|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
           23s Rrna Mutation G2482c
 gi|188596344|pdb|3CCV|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
           23s Rrna Mutation G2616a
 gi|188596375|pdb|3CD6|B Chain B, Co-cystal Of Large Ribosomal Subunit Mutant G2616a With
           Cc-puromycin
 gi|194368706|pdb|3CPW|B Chain B, The Structure Of The Antibiotic Linezolid Bound To The
           Large Ribosomal Subunit Of Haloarcula Marismortui
 gi|206581909|pdb|3CMA|B Chain B, The Structure Of Cca And Cca-Phe-Cap-Bio Bound To The
           Large Ribosomal Subunit Of Haloarcula Marismortui
 gi|206581942|pdb|3CME|B Chain B, The Structure Of Ca And Cca-Phe-Cap-Bio Bound To The Large
           Ribosomal Subunit Of Haloarcula Marismortui
 gi|208435496|pdb|2QEX|B Chain B, Negamycin Binds To The Wall Of The Nascent Chain Exit
           Tunnel Of The 50s Ribosomal Subunit
 gi|290790037|pdb|3I55|B Chain B, Co-Crystal Structure Of Mycalamide A Bound To The Large
           Ribosomal Subunit
 gi|290790068|pdb|3I56|B Chain B, Co-Crystal Structure Of Triacetyloleandomcyin Bound To The
           Large Ribosomal Subunit
 gi|374977943|pdb|4ADX|B Chain B, The Cryo-Em Structure Of The Archaeal 50s Ribosomal
           Subunit In Complex With Initiation Factor 6
 gi|55231109|gb|AAV46528.1| 50S ribosomal protein L3 [Haloarcula marismortui ATCC 43049]
 gi|343783768|gb|AEM57745.1| 50S ribosomal protein L3P [Haloarcula hispanica ATCC 33960]
 gi|445765293|gb|EMA16432.1| 50S ribosomal protein L3P [Haloarcula sinaiiensis ATCC 33800]
          Length = 338

 Score =  171 bits (432), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 100/277 (36%), Positives = 148/277 (53%), Gaps = 8/277 (2%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLGF PRKR++    +  ++P DD  +P  +  F GYKAGMTH+V   ++P S   
Sbjct: 7   PRKGSLGFGPRKRSTSETPRFNSWPSDD-GQPG-VQGFAGYKAGMTHVVLVNDEPNSPRE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VT+IETPP+  V +  Y  TP G R L  VW    + E+ R            
Sbjct: 65  GMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTLDVPEDHDPDA 124

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYC-TVIRKKAHLMEIQVNGGSVAQKVDFAYGFF 187
           A  +    +E  D   D++     +     +V +KK  +ME +V GGSV+ ++D A    
Sbjct: 125 AEEQIRDAHEAGD-LGDLRLITHTVPDAVPSVPKKKPDVMETRVGGGSVSDRLDHALDIV 183

Query: 188 EK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAW 243
           E   +  ++ +F+  E  D+ GVTKGKG +G V RWGV +   K  R    R++  +G W
Sbjct: 184 EDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW 243

Query: 244 HPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           +P+RV  TV + GQ GYH RTE+NK++  +G+  + +
Sbjct: 244 NPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPT 280


>gi|148801|gb|AAA86859.1| ribosomal protein L3 [Haloarcula marismortui]
          Length = 338

 Score =  171 bits (432), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 100/277 (36%), Positives = 148/277 (53%), Gaps = 8/277 (2%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLGF PRKR++    +  ++P DD  +P  +  F GYKAGMTH+V   ++P S   
Sbjct: 7   PRKGSLGFGPRKRSTSETPRFNSWPSDD-GQPG-VQGFAGYKAGMTHVVLVNDEPNSPRE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VT+IETPP+  V +  Y  TP G R L  VW    + E+ R            
Sbjct: 65  GMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTLDVPEDHDPDA 124

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYC-TVIRKKAHLMEIQVNGGSVAQKVDFAYGFF 187
           A  +    +E  D   D++     +     +V +KK  +ME +V GGSV+ ++D A    
Sbjct: 125 AEEQIRDAHEAGD-LGDLRLITHTVPDAVPSVPKKKPDVMETRVGGGSVSDRLDHALDIV 183

Query: 188 EK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAW 243
           E   +  ++ +F+  E  D+ GVTKGKG +G V RWGV +   K  R    R++  +G W
Sbjct: 184 EDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW 243

Query: 244 HPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           +P+RV  TV + GQ GYH RTE+NK++  +G+  + +
Sbjct: 244 NPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPT 280


>gi|397773843|ref|YP_006541389.1| ribosomal protein L3 [Natrinema sp. J7-2]
 gi|448341390|ref|ZP_21530351.1| 50S ribosomal protein L3P [Natrinema gari JCM 14663]
 gi|397682936|gb|AFO57313.1| ribosomal protein L3 [Natrinema sp. J7-2]
 gi|445628072|gb|ELY81383.1| 50S ribosomal protein L3P [Natrinema gari JCM 14663]
          Length = 339

 Score =  171 bits (432), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 101/277 (36%), Positives = 148/277 (53%), Gaps = 7/277 (2%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLGF PR+RA+    +  ++P DD  +P  L  F GYKAGMTH+V   +K  S   
Sbjct: 7   PRKGSLGFGPRQRATSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDKANSPTE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VTI+ETPP+  V +  Y  TP G++ +  VW      E+ R       +    
Sbjct: 65  GMEETVPVTIVETPPMRAVALRAYEDTPYGMKPITEVWTDEFVPELDRVLDLPGDEYDTD 124

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMK-KYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGFF 187
           A T   +  + +    D++     +     +V +KK  +ME +V GGSV  +VDFA    
Sbjct: 125 AATDELRGLQEEGRVDDVRVITHTVPGDVPSVPKKKPDVMETRVGGGSVDDRVDFALETI 184

Query: 188 EK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAW 243
           E   +  ++ VF+  E +D  GVTKGKG +G V RWGV +   K  R    R++  +G W
Sbjct: 185 EDGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW 244

Query: 244 HPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           +P+RV  TV + GQ GYH RTE+NK++  +G+ +  +
Sbjct: 245 NPSRVRSTVPQQGQTGYHQRTELNKRLVDIGEGADAT 281


>gi|15825944|pdb|1JJ2|B Chain B, Fully Refined Crystal Structure Of The Haloarcula
           Marismortui Large Ribosomal Subunit At 2.4 Angstrom
           Resolution
 gi|20150989|pdb|1KQS|B Chain B, The Haloarcula Marismortui 50s Complexed With A
           Pretranslocational Intermediate In Protein Synthesis
 gi|22218923|pdb|1K8A|D Chain D, Co-Crystal Structure Of Carbomycin A Bound To The 50s
           Ribosomal Subunit Of Haloarcula Marismortui
 gi|22218957|pdb|1K9M|D Chain D, Co-Crystal Structure Of Tylosin Bound To The 50s Ribosomal
           Subunit Of Haloarcula Marismortui
 gi|22219000|pdb|1KD1|D Chain D, Co-crystal Structure Of Spiramycin Bound To The 50s
           Ribosomal Subunit Of Haloarcula Marismortui
 gi|22219327|pdb|1M1K|D Chain D, Co-Crystal Structure Of Azithromycin Bound To The 50s
           Ribosomal Subunit Of Haloarcula Marismortui
 gi|24159022|pdb|1M90|D Chain D, Co-Crystal Structure Of Cca-Phe-Caproic Acid-Biotin And
           Sparsomycin Bound To The 50s Ribosomal Subunit
 gi|34811119|pdb|1K73|D Chain D, Co-Crystal Structure Of Anisomycin Bound To The 50s
           Ribosomal Subunit
 gi|34811149|pdb|1KC8|D Chain D, Co-Crystal Structure Of Blasticidin S Bound To The 50s
           Ribosomal Subunit
 gi|34811188|pdb|1N8R|D Chain D, Structure Of Large Ribosomal Subunit In Complex With
           Virginiamycin M
 gi|34811218|pdb|1NJI|D Chain D, Structure Of Chloramphenicol Bound To The 50s Ribosomal
           Subunit
 gi|37927902|pdb|1Q7Y|D Chain D, Crystal Structure Of Ccdap-puromycin Bound At The Peptidyl
           Transferase Center Of The 50s Ribosomal Subunit
 gi|37927937|pdb|1Q81|D Chain D, Crystal Structure Of Minihelix With 3' Puromycin Bound To
           A- Site Of The 50s Ribosomal Subunit.
 gi|37927973|pdb|1Q82|D Chain D, Crystal Structure Of Cc-Puromycin Bound To The A-Site Of
           The 50s Ribosomal Subunit
 gi|37928009|pdb|1Q86|D Chain D, Crystal Structure Of Cca-Phe-Cap-Biotin Bound
           Simultaneously At Half Occupancy To Both The A-Site And
           P- Site Of The The 50s Ribosomal Subunit.
 gi|39654674|pdb|1QVF|B Chain B, Structure Of A Deacylated Trna Minihelix Bound To The E
           Site Of The Large Ribosomal Subunit Of Haloarcula
           Marismortui
 gi|39654707|pdb|1QVG|B Chain B, Structure Of Cca Oligonucleotide Bound To The Trna Binding
           Sites Of The Large Ribosomal Subunit Of Haloarcula
           Marismortui
 gi|55670537|pdb|1W2B|B Chain B, Trigger Factor Ribosome Binding Domain In Complex With 50s
 gi|145580205|pdb|2OTL|B Chain B, Girodazole Bound To The Large Subunit Of Haloarcula
           Marismortui
 gi|228311913|pdb|3CXC|B Chain B, The Structure Of An Enhanced Oxazolidinone Inhibitor Bound
           To The 50s Ribosomal Subunit Of H. Marismortui
 gi|228312143|pdb|3G4S|B Chain B, Co-Crystal Structure Of Tiamulin Bound To The Large
           Ribosomal Subunit
 gi|228312199|pdb|3G6E|B Chain B, Co-Crystal Structure Of Homoharringtonine Bound To The
           Large Ribosomal Subunit
 gi|228312235|pdb|3G71|B Chain B, Co-crystal Structure Of Bruceantin Bound To The Large
           Ribosomal Subunit
 gi|392311507|pdb|3OW2|B Chain B, Crystal Structure Of Enhanced Macrolide Bound To 50s
           Ribosomal Subunit
          Length = 337

 Score =  171 bits (432), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 100/277 (36%), Positives = 148/277 (53%), Gaps = 8/277 (2%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLGF PRKR++    +  ++P DD  +P  +  F GYKAGMTH+V   ++P S   
Sbjct: 6   PRKGSLGFGPRKRSTSETPRFNSWPSDD-GQPG-VQGFAGYKAGMTHVVLVNDEPNSPRE 63

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VT+IETPP+  V +  Y  TP G R L  VW    + E+ R            
Sbjct: 64  GMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTLDVPEDHDPDA 123

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYC-TVIRKKAHLMEIQVNGGSVAQKVDFAYGFF 187
           A  +    +E  D   D++     +     +V +KK  +ME +V GGSV+ ++D A    
Sbjct: 124 AEEQIRDAHEAGD-LGDLRLITHTVPDAVPSVPKKKPDVMETRVGGGSVSDRLDHALDIV 182

Query: 188 EK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAW 243
           E   +  ++ +F+  E  D+ GVTKGKG +G V RWGV +   K  R    R++  +G W
Sbjct: 183 EDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW 242

Query: 244 HPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           +P+RV  TV + GQ GYH RTE+NK++  +G+  + +
Sbjct: 243 NPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPT 279


>gi|254168629|ref|ZP_04875472.1| ribosomal protein L3 [Aciduliprofundum boonei T469]
 gi|197622463|gb|EDY35035.1| ribosomal protein L3 [Aciduliprofundum boonei T469]
          Length = 340

 Score =  171 bits (432), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 100/268 (37%), Positives = 150/268 (55%), Gaps = 13/268 (4%)

Query: 8   HPRHGSLGFLPRKRASRHRGKVKAFPK--DDPSKPCRLTAFLGYKAGMTHIVRDVEKPGS 65
           HPR GS+ + PRKRA+    +++ +P+  D P    R+  F GYKAGMTH+     +  +
Sbjct: 6   HPRRGSMAYYPRKRAASPIPRIRTWPEIEDGP----RIQGFAGYKAGMTHVFTIDWRKHT 61

Query: 66  KLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKS 125
               +E    VT+IE PP+ V GV  Y +T  GL+S+  VW ++L++E+ RRF      S
Sbjct: 62  TTAGQEIWTPVTVIEVPPMKVAGVRFYERTMYGLKSIGEVWDENLDKELARRFPLPKEYS 121

Query: 126 KKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKA-HLMEIQVNGGSVAQKVDFAY 184
           K KA  +     E      DI+  +    K  + + KKA  +MEI+V GG++  + ++A 
Sbjct: 122 KDKALERIKGDIE------DIRLIVHTQPKLVSGVPKKAPDIMEIRVGGGTIDARKEYAL 175

Query: 185 GFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWH 244
               K+I         + +D+I +TKGKG++G V R+GV  L +K  +  R +  +G WH
Sbjct: 176 NLLGKEIKFSDFKSDGKFVDVIAITKGKGFQGHVKRFGVKLLNQKNRKHRRMIGTLGPWH 235

Query: 245 PARVSFTVARAGQNGYHHRTEMNKKIYK 272
           P  V +TV +AGQ GYH RTE NK+I K
Sbjct: 236 PDWVRYTVPQAGQMGYHQRTEYNKRIVK 263


>gi|212223211|ref|YP_002306447.1| 50S ribosomal protein L3P [Thermococcus onnurineus NA1]
 gi|226730581|sp|B6YSL3.1|RL3_THEON RecName: Full=50S ribosomal protein L3P
 gi|212008168|gb|ACJ15550.1| LSU ribosomal protein L3P [Thermococcus onnurineus NA1]
          Length = 347

 Score =  170 bits (431), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 102/275 (37%), Positives = 146/275 (53%), Gaps = 8/275 (2%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   PR GSL + PRKRA     +++ +PKD      R+  F GYKAGMTHI+   ++PG
Sbjct: 3   KIHRPRRGSLAYSPRKRAKSIVPRIRKWPKDSE---VRMLGFAGYKAGMTHILMIDDRPG 59

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
                KE    VT++E PPL V G+  Y +   GL +   VW   LN+ V+RR       
Sbjct: 60  LT-KGKEIFMPVTVVEVPPLFVYGIRAYRQGYLGLETATEVWFHELNDYVKRRIKTLPKD 118

Query: 125 SKKKAFTKYTKKYE--TDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDF 182
             ++AF     + E   +DG+      L   + +   ++KK  +ME  + G  V  K D+
Sbjct: 119 YNEEAFQAKLGQLEDLVNDGEIVDVRLLVHTQPWLIKLKKKPEVMEYAIGGDDVKAKFDY 178

Query: 183 AYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACI 240
           A     K++    V  + E++D+I VTKGKG +G V RWG+     K  R    R V  +
Sbjct: 179 AKEKIGKELRASEVLHEGELLDVIAVTKGKGTQGPVKRWGIKIQFHKAQRAGKGRHVGNL 238

Query: 241 GAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK 275
           G WHP RV +TV +AGQ G+HHRTE NK++  +G+
Sbjct: 239 GPWHPTRVMWTVPQAGQMGFHHRTEFNKRLIAIGE 273


>gi|13384820|ref|NP_079701.1| ribosomal protein L3-like isoform 2 [Mus musculus]
 gi|12832343|dbj|BAB22066.1| unnamed protein product [Mus musculus]
 gi|12835407|dbj|BAB23247.1| unnamed protein product [Mus musculus]
 gi|148690417|gb|EDL22364.1| ribosomal protein L3-like [Mus musculus]
 gi|148877901|gb|AAI45877.1| Ribosomal protein L3-like [Mus musculus]
 gi|148877992|gb|AAI45879.1| Ribosomal protein L3-like [Mus musculus]
          Length = 240

 Score =  170 bits (431), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 76/130 (58%), Positives = 100/130 (76%)

Query: 161 RKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTR 220
           +KKAH+MEIQ+NGG+VA+KV +     EKQ+P+ +VF + E+ID+I VTKG+G +GV +R
Sbjct: 8   QKKAHIMEIQLNGGTVAEKVAWVQARMEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSR 67

Query: 221 WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           W   +LPRKTH+GLRKVACIGAWHPARV  ++ARAGQ GYHHRTE+NKKIY++G+     
Sbjct: 68  WHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHME 127

Query: 281 HSAMTEFDRS 290
              M   + S
Sbjct: 128 DGKMVRNNAS 137


>gi|325958531|ref|YP_004289997.1| 50S ribosomal protein L3 [Methanobacterium sp. AL-21]
 gi|325329963|gb|ADZ09025.1| ribosomal protein L3 [Methanobacterium sp. AL-21]
          Length = 337

 Score =  170 bits (431), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 110/275 (40%), Positives = 149/275 (54%), Gaps = 11/275 (4%)

Query: 8   HPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKL 67
            PR GS+ F PRKRA++   KV+++P+ + S  C L  F GYK GMTH+        S  
Sbjct: 6   QPRSGSMAFSPRKRAAKETPKVRSWPETEES--C-LLGFPGYKVGMTHVTMLDNVKNSPT 62

Query: 68  HKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKK 127
              E    VTI+ETPP+VV+GV  Y K  RGL++L  V A+ L+E++ R+          
Sbjct: 63  SGMEVSSPVTILETPPVVVMGVRAYRKDTRGLKTLNDVMAKDLDEDLTRKIT---LPKDY 119

Query: 128 KAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVI-RKKAHLMEIQVNGGSVAQKVDFAYGF 186
               K  +  E  D  +DI+  L    +  + I +KK  ++E  + G SV  K +FA   
Sbjct: 120 DVEAKLDEMKEQLDEVEDIRVLLHTKPRLASGIPKKKPEIIECGIGGKSVEDKFEFARSL 179

Query: 187 FEKQI-PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAW 243
             K++ P D+ F   E +D I VTKGKG++G V R+GV     K  R    R V  IG W
Sbjct: 180 LGKEVNPADS-FSDGEHVDTIAVTKGKGFQGPVKRFGVRIQYGKAARSSKARHVGSIGPW 238

Query: 244 HPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ 278
            PAR  +TVA AGQ GYH RTE NKKI ++   SQ
Sbjct: 239 TPARTMWTVAMAGQMGYHKRTEFNKKILRIADESQ 273


>gi|288931510|ref|YP_003435570.1| 50S ribosomal protein L3 [Ferroglobus placidus DSM 10642]
 gi|288893758|gb|ADC65295.1| ribosomal protein L3 [Ferroglobus placidus DSM 10642]
          Length = 329

 Score =  170 bits (431), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 105/278 (37%), Positives = 155/278 (55%), Gaps = 14/278 (5%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPK-DDPSKPCRLTAFLGYKAGMTHIVRDVEKP 63
           K+  PR GSLGF PRKRAS    +++++P  D+P    RL  F GYKAGMTH++   ++ 
Sbjct: 2   KYHRPRRGSLGFSPRKRASSIIPRIRSWPDCDEP----RLLGFAGYKAGMTHVIMIDDRK 57

Query: 64  GSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWC 123
            S  + +E    VT++ETPP+ V+G+  Y KT  GL+    VW   ++  + RR      
Sbjct: 58  NSPTYGEEIMVPVTVLETPPMKVMGIRVYRKTVYGLQIAGEVWTDEVDSYLSRRL----Q 113

Query: 124 KSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFA 183
             KKK      K  E DD  +       +      V +K   +ME +V GG V   +++A
Sbjct: 114 IPKKKGDVDKLK--EIDDIAEVRVITYTQPYLITGVPKKVPDVMEQKV-GGDVEAALNYA 170

Query: 184 YGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIG 241
                K++ ++ VF++   ID++ +TKGKG++G V RWGV  L  K  R    R+V  +G
Sbjct: 171 IEKLGKEVRVNEVFKEGAFIDVLSITKGKGFQGPVKRWGVITLDAKHARSSKHRRVGTLG 230

Query: 242 AWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
            WHP RV +TV +AGQ G+H RTE NK+I K+G   ++
Sbjct: 231 PWHPHRVRWTVPQAGQMGFHQRTEYNKRILKIGTNGED 268


>gi|448671480|ref|ZP_21687419.1| 50S ribosomal protein L3P [Haloarcula amylolytica JCM 13557]
 gi|445766083|gb|EMA17220.1| 50S ribosomal protein L3P [Haloarcula amylolytica JCM 13557]
          Length = 338

 Score =  170 bits (431), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 100/277 (36%), Positives = 146/277 (52%), Gaps = 8/277 (2%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLGF PRKR++    +  ++P DD  +P  +  F GYKAGMTH+V   ++P S   
Sbjct: 7   PRKGSLGFGPRKRSTSETPRFNSWPSDD-GQPG-VQGFAGYKAGMTHVVLVNDEPNSPRE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VT+IETPP+  V +  Y  TP G R L  VW    + E+ R            
Sbjct: 65  GMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTLDVPEDHDPDA 124

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYC-TVIRKKAHLMEIQVNGGSVAQKVDFAYGFF 187
           A  +     E  D   D++     +     +V +KK  +ME +V GGSV+ ++D A    
Sbjct: 125 AEEQVRDALEAGD-LGDVRLITHTVPDAVPSVPKKKPDVMETRVGGGSVSDRLDHALDLV 183

Query: 188 EK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAW 243
           E   +  ++ +F+  E  D+ GVTKGKG +G V RWGV +   K  R    R++  +G W
Sbjct: 184 EDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW 243

Query: 244 HPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           +P+RV  TV + GQ GYH RTE+NK++  +G   + +
Sbjct: 244 NPSRVRSTVPQQGQTGYHQRTELNKRLIDIGDGDEPT 280


>gi|448578201|ref|ZP_21643636.1| 50S ribosomal protein L3P [Haloferax larsenii JCM 13917]
 gi|445726742|gb|ELZ78358.1| 50S ribosomal protein L3P [Haloferax larsenii JCM 13917]
          Length = 338

 Score =  170 bits (431), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 100/279 (35%), Positives = 153/279 (54%), Gaps = 12/279 (4%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GS+GF PRKRA++   ++K++P DD S    L  F GYKAGMTH++   ++  S   
Sbjct: 7   PRKGSMGFSPRKRATKEVPRIKSWPSDDGS--PALQGFAGYKAGMTHVMMVNDEADSPRE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRF---YKNWCKS 125
             E    VT++ETPP+  V V  Y +T  G++    VWA   ++E+ R      ++  + 
Sbjct: 65  GMEEAVPVTVVETPPMRAVAVRAYEQTSYGMKPKTEVWASEFHDELDRVLDLPAEDTFEE 124

Query: 126 KKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYG 185
             +A  +  +  E DD +         +K    V +KK  +ME +V GGS+ ++ DFA  
Sbjct: 125 DAEALREAVEAGEVDDLRVITHTVPAGLK---NVPKKKPDVMETRVGGGSLVERADFALE 181

Query: 186 FFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIG 241
              +  +  +  VF+  E +D  GVTKGKG +G V RWGV +   K  R    R++  +G
Sbjct: 182 LVGEGGEHEMSDVFRAGEYLDAAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLG 241

Query: 242 AWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
            W+P+RV  TV + GQ GYH RTE+NK++  LG+  + +
Sbjct: 242 PWNPSRVRSTVPQLGQTGYHQRTELNKRLIDLGEGDEPT 280


>gi|448411357|ref|ZP_21575822.1| 50S ribosomal protein L3P [Halosimplex carlsbadense 2-9-1]
 gi|445670545|gb|ELZ23144.1| 50S ribosomal protein L3P [Halosimplex carlsbadense 2-9-1]
          Length = 349

 Score =  170 bits (431), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 102/274 (37%), Positives = 145/274 (52%), Gaps = 8/274 (2%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLGF PR RA+    +  ++P DD  +P  L  F GYKAGMTH+V   ++P S   
Sbjct: 7   PRKGSLGFGPRTRAASETPRFNSWPDDD-GQPG-LQGFAGYKAGMTHVVLINDEPDSPRE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VT+IETPPL  V +  Y  TP G R L  VWA   + E+ R            
Sbjct: 65  GMEETVPVTVIETPPLRAVALRAYEDTPYGQRPLTEVWADEFHGELDRTLDVPEDHDADA 124

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMK-KYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGFF 187
           A  +  + +E  D   D++     +      V RKK  +ME +V GGS++ ++DF     
Sbjct: 125 AEEQIRQAHEAGD-LGDVRVITHTVPTDIAGVPRKKPEVMETRVGGGSLSDRLDFGLDLV 183

Query: 188 EK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAW 243
            +  +  +  VF+  E  D+  VTKGKG +G V RWGV +   K  R    R++  +G W
Sbjct: 184 AEGGEHSMTDVFRAGEYADVAAVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW 243

Query: 244 HPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAS 277
           +P+RV  TV + GQ GYH RTE+NK++  +G+ +
Sbjct: 244 NPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGT 277


>gi|14520558|ref|NP_126033.1| 50S ribosomal protein L3P [Pyrococcus abyssi GE5]
 gi|9910846|sp|Q9V1T5.1|RL3_PYRAB RecName: Full=50S ribosomal protein L3P
 gi|5457774|emb|CAB49264.1| rpl3P LSU ribosomal protein L3P [Pyrococcus abyssi GE5]
 gi|380741085|tpe|CCE69719.1| TPA: 50S ribosomal protein L3P [Pyrococcus abyssi GE5]
          Length = 361

 Score =  170 bits (430), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 106/292 (36%), Positives = 159/292 (54%), Gaps = 27/292 (9%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   PR GSL F PRKRA     +++++PK+      R+  F GYKAGMTHI+   ++PG
Sbjct: 3   KVHRPRRGSLAFSPRKRAKSIVPRIRSWPKETE---VRMLGFAGYKAGMTHILMIDDEPG 59

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWA------QHLNEEVRRRF 118
              + KE    VTIIETPPL V G+  Y +   GL +   V         +++++ + R 
Sbjct: 60  LT-NGKEIFMPVTIIETPPLRVFGIRAYRQGYLGLETATEVIVPDFELDNYVSKKAKGRK 118

Query: 119 YKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKK---------------YCTVIRKK 163
           +  +   K++  T   K Y  DD ++ +   LE M K               +   ++KK
Sbjct: 119 FTFYQLLKRRIAT-LPKNYTKDDFEQKL-GNLEDMIKEGEIVEVRALVATQPWVIKLKKK 176

Query: 164 AHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 223
             +ME  + G SV +K ++      K++ +  V ++ E++D+I VTKGKG +G V RWG+
Sbjct: 177 PEVMEYAIGGTSVEEKFNYIKEKLGKELRVGEVLKEGELLDVIAVTKGKGTQGPVKRWGI 236

Query: 224 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK 275
                K  +G RKV  IG WHPARV +TV  AGQ G+HHRTE+NK++  +G+
Sbjct: 237 KLRAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIGE 288


>gi|448681421|ref|ZP_21691554.1| 50S ribosomal protein L3P [Haloarcula argentinensis DSM 12282]
 gi|445767954|gb|EMA19047.1| 50S ribosomal protein L3P [Haloarcula argentinensis DSM 12282]
          Length = 338

 Score =  170 bits (430), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 99/277 (35%), Positives = 148/277 (53%), Gaps = 8/277 (2%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GS+GF PRKR++    +  ++P DD  +P  +  F GYKAGMTH+V   ++P S   
Sbjct: 7   PRKGSMGFGPRKRSTSETPRFNSWPSDD-GQPG-VQGFAGYKAGMTHVVLVNDEPNSPRE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VT+IETPP+  V +  Y  TP G R L  VW    + E+ R            
Sbjct: 65  GMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTLDVPEDHDPDA 124

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYC-TVIRKKAHLMEIQVNGGSVAQKVDFAYGFF 187
           A  +    +E  D   D++     +     +V +KK  +ME +V GGSV+ ++D A    
Sbjct: 125 AEEQIRDAHEAGD-LGDLRLITHTVPDAVPSVPKKKPDVMETRVGGGSVSDRLDHALDIV 183

Query: 188 EK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAW 243
           E   +  ++ +F+  E  D+ GVTKGKG +G V RWGV +   K  R    R++  +G W
Sbjct: 184 EDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW 243

Query: 244 HPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           +P+RV  TV + GQ GYH RTE+NK++  +G+  + +
Sbjct: 244 NPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPT 280


>gi|448399310|ref|ZP_21570612.1| 50S ribosomal protein L3P [Haloterrigena limicola JCM 13563]
 gi|445669217|gb|ELZ21830.1| 50S ribosomal protein L3P [Haloterrigena limicola JCM 13563]
          Length = 339

 Score =  170 bits (430), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 103/277 (37%), Positives = 147/277 (53%), Gaps = 7/277 (2%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLGF PRKRA+    +  ++P DD  +P  L  F GYKAGMTH+V   +K  S   
Sbjct: 7   PRKGSLGFGPRKRATSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDKSNSPTE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VTI+ETPP+  V +  Y  TP G++ L  VW      E+ R            
Sbjct: 65  GMEQTVPVTIVETPPMRAVSLRAYEDTPYGMKPLTEVWTDEFVPELDRVLDLPGDDYDAD 124

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKM-KKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGFF 187
           A T   +    +    D++     +  +  +V +KK  +ME +V GGSV ++VDFA    
Sbjct: 125 AATDELRGLHEEGRVDDVRVITHTVPSEVPSVPKKKPDVMETRVGGGSVDERVDFALELL 184

Query: 188 EK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAW 243
           E   +  ++ VF+  E +D  GVTKGKG +G V RWGV +   K  R    R++  +G W
Sbjct: 185 EDGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW 244

Query: 244 HPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           +P+RV  TV + GQ GYH RTE+NK++  +G  +  +
Sbjct: 245 NPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGADAT 281


>gi|14278035|pdb|1GIY|E Chain E, Crystal Structure Of The Ribosome At 5.5 A Resolution.
           This File, 1giy, Contains The 50s Ribosome Subunit. The
           30s Ribosome Subunit, Three Trna, And Mrna Molecules Are
           In The File 1gix
 gi|28373724|pdb|1ML5|EE Chain e, Structure Of The E. Coli Ribosomal Termination Complex
           With Release Factor 2
 gi|66361021|pdb|1YL3|E Chain E, Crystal Structure Of 70s Ribosome With Thrs Operator And
           Trnas. Large Subunit. The Coordinates For The Small
           Subunit Are In The Pdb Entry 1yl4.
 gi|88192261|pdb|2B66|E Chain E, 50s Ribosomal Subunit From A Crystal Structure Of Release
           Factor Rf1, Trnas And Mrna Bound To The Ribosome. This
           File Contains The 50s Subunit From A Crystal Structure
           Of Release Factor Rf1, Trnas And Mrna Bound To The
           Ribosome And Is Described In Remark 400
 gi|88192324|pdb|2B9N|E Chain E, 50s Ribosomal Subunit From A Crystal Structure Of Release
           Factor Rf2, Trnas And Mrna Bound To The Ribosome. This
           File Contains The 50s Subunit From A Crystal Structure
           Of Release Factor Rf1, Trnas And Mrna Bound To The
           Ribosome And Is Described In Remark 400.
 gi|88192379|pdb|2B9P|E Chain E, 50s Ribosomal Subunit From A Crystal Structure Of The
           Ribosome In Complex With Trnas And Mrna With A Stop
           Codon In The A-Site. This File Contains The 50s Subunit
           From A Crystal Structure Of The Ribosome In Complex With
           Trnas And Mrna With A Stop Codon In The A-Site And Is
           Described In Remark 400
          Length = 338

 Score =  170 bits (430), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 99/277 (35%), Positives = 148/277 (53%), Gaps = 8/277 (2%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLGF PRKR++    +  ++P DD  +P  +  F GYKAGMTH+V   ++P S   
Sbjct: 6   PRKGSLGFGPRKRSTSETPRFNSWPSDD-GQPG-VQGFAGYKAGMTHVVLVNDEPNSPRE 63

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VT+IETPP+  V +  Y  TP G R L  VW    + E+ R        +   
Sbjct: 64  GMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTLSDRLDHALDI 123

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYC-TVIRKKAHLMEIQVNGGSVAQKVDFAYGFF 187
              +    +E  D   D++     +     +V +KK  +ME +V GGSV+ ++D A    
Sbjct: 124 VEDQIRDAHEAGD-LGDLRLITHTVPDAVPSVPKKKPDVMETRVGGGSVSDRLDHALDIV 182

Query: 188 EK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAW 243
           E   +  ++ +F+  E  D+ GVTKGKG +G V RWGV +   K  R    R++  +G W
Sbjct: 183 EDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW 242

Query: 244 HPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           +P+RV  TV + GQ GYH RTE+NK++  +G+  + +
Sbjct: 243 NPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPT 279


>gi|341582063|ref|YP_004762555.1| 50S ribosomal protein L3P [Thermococcus sp. 4557]
 gi|340809721|gb|AEK72878.1| 50S ribosomal protein L3P [Thermococcus sp. 4557]
          Length = 347

 Score =  170 bits (430), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 103/275 (37%), Positives = 144/275 (52%), Gaps = 8/275 (2%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   PR GSL + PRKRA     ++K +PKD      R+  F GYKAGMTH++   ++PG
Sbjct: 3   KIHRPRRGSLAYSPRKRARSIVPRIKKWPKDSE---VRMLGFAGYKAGMTHVLMIDDRPG 59

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
                KE    VTI+E PPL V G+  Y +   GL +   VW   LN+ V+RR       
Sbjct: 60  LT-KGKEIFMPVTIVEVPPLFVYGIRAYRQGYLGLETATEVWFHELNDHVKRRIKTLPKN 118

Query: 125 SKKKAFTKYTKKYE--TDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDF 182
             ++AF     + E   + G+      L   + +   ++KK  +ME  + G  V  K D+
Sbjct: 119 YDEEAFKAKLAQLEELIESGEIVDVRLLVHTQPWLIKLKKKPEVMEYAIGGDDVKAKFDY 178

Query: 183 AYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACI 240
           A     K++    V  + E++DII VTKGKG +G V RWGV     K  R    R +  +
Sbjct: 179 AKEKIGKELRASEVLHEGELLDIIAVTKGKGTQGPVKRWGVKIQFHKAQRAGKARHIGNL 238

Query: 241 GAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK 275
           G WHP RV +TV  AGQ G+HHRTE NK++  +G+
Sbjct: 239 GPWHPTRVMWTVPLAGQMGFHHRTEFNKRLIAIGE 273


>gi|134045079|ref|YP_001096565.1| 50S ribosomal protein L3P [Methanococcus maripaludis C5]
 gi|166233156|sp|A4FVY2.1|RL3_METM5 RecName: Full=50S ribosomal protein L3P
 gi|132662704|gb|ABO34350.1| LSU ribosomal protein L3P [Methanococcus maripaludis C5]
          Length = 334

 Score =  170 bits (430), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 102/279 (36%), Positives = 152/279 (54%), Gaps = 13/279 (4%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   PR GSL F PRKRA +   K++++P D   K   L AF  YKAG TH +     P 
Sbjct: 4   KKNRPRRGSLAFSPRKRAKKLVPKIRSWPAD---KKVGLQAFPVYKAGTTHALLIENNPK 60

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFY--KNW 122
           S  + +E    VT++ETP + V G+  Y KT +GL++L  VWA+ L+ ++ R+    K  
Sbjct: 61  SPNNGQEVFTPVTVLETPDVTVAGIRLYEKTTKGLKALTEVWAEQLDGDLGRKLTLAKKE 120

Query: 123 CKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDF 182
            K    A     +K        +++A +    K   + +KK  ++EI++ G SVA+++ +
Sbjct: 121 EKKTADALDAVVEKAT------EVRAIVHTNPKTTGIPKKKPEVVEIRIGGSSVAERLAY 174

Query: 183 AYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPRKTHRGL-RKVACI 240
           A     K + I  VF+  E+ID + +TKGKG++G V RWG+  +  +   +G+ R    I
Sbjct: 175 AKEILGKTLAIGDVFEAGEIIDTLAITKGKGFQGSVKRWGIKVQFGKHQRKGVGRHTGSI 234

Query: 241 GAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
           G W P RV +TV   GQ G+H RTE NK+I KLG    E
Sbjct: 235 GPWRPRRVMWTVPLPGQMGFHQRTEYNKRILKLGSEGAE 273


>gi|57641477|ref|YP_183955.1| 50S ribosomal protein L3P [Thermococcus kodakarensis KOD1]
 gi|73917495|sp|Q5JDJ0.1|RL3_PYRKO RecName: Full=50S ribosomal protein L3P
 gi|57159801|dbj|BAD85731.1| LSU ribosomal protein L3P [Thermococcus kodakarensis KOD1]
          Length = 346

 Score =  170 bits (430), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 103/275 (37%), Positives = 146/275 (53%), Gaps = 8/275 (2%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   PR GSL + PRKRA     +++++PKD      R+  F GYKAGMTHI+   + PG
Sbjct: 3   KIHRPRRGSLAYSPRKRAKSIVPRIRSWPKDSE---VRMLGFAGYKAGMTHILMIDDSPG 59

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
                KE    VTI+E PPL V G+  Y +   GL +   VW   L++ V RR       
Sbjct: 60  LT-KGKEIFVPVTIVEVPPLFVYGIRAYKQGYLGLETATEVWFHDLHKNVARRIKTLPKN 118

Query: 125 SKKKAFTKYTKKYE--TDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDF 182
             ++AF     + E   +DG+      L   + +   ++KK  +ME  + G  V  K D+
Sbjct: 119 YNEEAFQAKLGQLEDLVNDGEIADVRLLVHTQPWLIGLKKKPEVMEYAIGGDDVKAKFDY 178

Query: 183 AYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACI 240
           A     K++    V  + E++D+I VTKGKG +G V RWGV     K  R    R +  +
Sbjct: 179 AKEKIGKELRAGEVLHEGELLDVIAVTKGKGTQGPVKRWGVKVQFHKAQRAGKGRHIGNL 238

Query: 241 GAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK 275
           G WHPARV +TV +AGQ G+HHRTE NK++  +G+
Sbjct: 239 GPWHPARVMWTVPQAGQMGFHHRTEFNKRLIAIGE 273


>gi|390960794|ref|YP_006424628.1| 50S ribosomal protein L3P [Thermococcus sp. CL1]
 gi|390519102|gb|AFL94834.1| 50S ribosomal protein L3P [Thermococcus sp. CL1]
          Length = 347

 Score =  170 bits (430), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 101/275 (36%), Positives = 146/275 (53%), Gaps = 8/275 (2%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   PR GSL + PRKRA     +++ +P+D      R+  F GYKAGMTH++   ++PG
Sbjct: 3   KIHRPRRGSLAYSPRKRAKSIVPRIRKWPQDSE---VRMLGFAGYKAGMTHVLMIDDRPG 59

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
                KE    VT++E PPL V G+  Y +   GL +   VW   LN+ VRRR       
Sbjct: 60  LT-KGKEIFMPVTVVEVPPLFVYGIRAYRQGYLGLETATEVWFHELNDYVRRRIKTLPKN 118

Query: 125 SKKKAFTKYTKKYE--TDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDF 182
             ++AF     + E   +DG+      L   + +   ++KK  +ME  + G  V  K D+
Sbjct: 119 YDEEAFKAKLGQLEDLVNDGEIVDVRLLVHTQPWLIKLKKKPEVMEYAIGGDDVRAKFDY 178

Query: 183 AYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACI 240
           A     K++    V  + E++D+I VTKGKG +G V RWGV     K  R    R +  +
Sbjct: 179 AKEKIGKELRASEVLHEGELLDVIAVTKGKGTQGPVKRWGVKIQFHKAQRAGKGRHIGNL 238

Query: 241 GAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK 275
           G WHP RV +TV +AGQ G+HHRTE NK++  +G+
Sbjct: 239 GPWHPTRVMWTVPQAGQMGFHHRTEFNKRLIAIGE 273


>gi|27066406|pdb|1FFK|B Chain B, Crystal Structure Of The Large Ribosomal Subunit From
           Haloarcula Marismortui At 2.4 Angstrom Resolution
          Length = 337

 Score =  170 bits (430), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 101/277 (36%), Positives = 149/277 (53%), Gaps = 9/277 (3%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLGF PRKR++    +  ++P DD  +P  +  F GYKAGMTH+V   ++P S   
Sbjct: 6   PRKGSLGFGPRKRSTSETPRFNSWPSDD-GQPG-VQGFAGYKAGMTHVVLVNDEPNSPRE 63

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             ET   VT+IETPP+  V +  Y  TP G R L  VW    + E+ R            
Sbjct: 64  GMETV-PVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTLDVPEDHDPDA 122

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYC-TVIRKKAHLMEIQVNGGSVAQKVDFAYGFF 187
           A  +    +E  D   D++     +     +V +KK  +ME +V GGSV+ ++D A    
Sbjct: 123 AEEQIRDAHEAGD-LGDLRLITHTVPDAVPSVPKKKPDVMETRVGGGSVSDRLDHALDIV 181

Query: 188 EK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAW 243
           E   +  ++ +F+  E  D+ GVTKGKG +G V RWGV +   K  R    R++  +G W
Sbjct: 182 EDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW 241

Query: 244 HPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           +P+RV  TV + GQ GYH RTE+NK++  +G+  + +
Sbjct: 242 NPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPT 278


>gi|289597193|ref|YP_003483889.1| 50S ribosomal protein L3 [Aciduliprofundum boonei T469]
 gi|289534980|gb|ADD09327.1| ribosomal protein L3 [Aciduliprofundum boonei T469]
          Length = 340

 Score =  169 bits (429), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/268 (36%), Positives = 150/268 (55%), Gaps = 13/268 (4%)

Query: 8   HPRHGSLGFLPRKRASRHRGKVKAFPK--DDPSKPCRLTAFLGYKAGMTHIVRDVEKPGS 65
           HPR GS+ + PRKRA+    +++ +P+  D P    R+  F GYKAGMTH+     +  +
Sbjct: 6   HPRRGSMAYYPRKRAASPIPRIRTWPEIEDGP----RIQGFAGYKAGMTHVFTIDWRKHT 61

Query: 66  KLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKS 125
               +E    VT+IE PP+ V GV  Y +T  GL+S+  VW ++L++E+ RRF      S
Sbjct: 62  TTAGQEIWTPVTVIEVPPMKVAGVRFYERTMYGLKSIGEVWDENLDKELARRFPLPKEYS 121

Query: 126 KKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKA-HLMEIQVNGGSVAQKVDFAY 184
           K KA  +     E      DI+  +    +  + + KKA  +MEI+V GG++  + ++A 
Sbjct: 122 KDKALERIKGDIE------DIRLIVHTQPRLVSGVPKKAPDIMEIRVGGGTIDARKEYAL 175

Query: 185 GFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWH 244
               K+I         + +D+I +TKGKG++G V R+GV  L +K  +  R +  +G WH
Sbjct: 176 NLLGKEIKFSDFKSDGKFVDVIAITKGKGFQGHVKRFGVKLLNQKNRKHRRMIGTLGPWH 235

Query: 245 PARVSFTVARAGQNGYHHRTEMNKKIYK 272
           P  V +TV +AGQ GYH RTE NK+I K
Sbjct: 236 PDWVRYTVPQAGQMGYHQRTEYNKRIVK 263


>gi|159905511|ref|YP_001549173.1| 50S ribosomal protein L3P [Methanococcus maripaludis C6]
 gi|226730533|sp|A9A9B8.1|RL3_METM6 RecName: Full=50S ribosomal protein L3P
 gi|159887004|gb|ABX01941.1| ribosomal protein L3 [Methanococcus maripaludis C6]
          Length = 334

 Score =  169 bits (429), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/279 (36%), Positives = 152/279 (54%), Gaps = 13/279 (4%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   PR GSL F PRKRA +   K++++P D   K   L AF  YKAG TH +     P 
Sbjct: 4   KKSRPRRGSLAFSPRKRAKKLVPKIRSWPAD---KKVGLQAFPVYKAGTTHALLIENNPK 60

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRF--YKNW 122
           S  + +E    VT++ETP + V G+  Y KT +GL++L  VWA+ L+ ++ R+    K  
Sbjct: 61  SPNNGQEVFTPVTVLETPDVTVAGIRLYEKTTKGLQALTEVWAEQLDGDLGRKLTLVKKE 120

Query: 123 CKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDF 182
            K    A     +K        +++A +    K   + +KK  ++EI++ G SVA+++ +
Sbjct: 121 EKKTADALDAVLEKAT------EVRAIVHTNPKTTGIPKKKPEVVEIRIGGSSVAERLAY 174

Query: 183 AYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPRKTHRGL-RKVACI 240
           A     K + I  VF+  E+ID + +TKGKG++G V RWG+  +  +   +G+ R    I
Sbjct: 175 AKEILGKTLAISDVFEAGEIIDTLAITKGKGFQGSVKRWGIKVQFGKHQRKGVGRHTGSI 234

Query: 241 GAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
           G W P RV +TV   GQ G+H RTE NK+I KLG    E
Sbjct: 235 GPWRPRRVMWTVPLPGQMGFHQRTEYNKRILKLGSEGAE 273


>gi|332158024|ref|YP_004423303.1| 50S ribosomal protein L3P [Pyrococcus sp. NA2]
 gi|331033487|gb|AEC51299.1| 50S ribosomal protein L3P [Pyrococcus sp. NA2]
          Length = 362

 Score =  169 bits (429), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/299 (36%), Positives = 154/299 (51%), Gaps = 40/299 (13%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   PR GSL F PRKRA     +++++PK+      R+  F GYKAGMTHI+   ++PG
Sbjct: 3   KVHRPRRGSLAFSPRKRAKSIVPRIRSWPKETE---VRMLGFAGYKAGMTHILMIDDEPG 59

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
              + KE    VTIIETPPL + GV  Y +   GL +   V               N+  
Sbjct: 60  LT-NGKEIFMPVTIIETPPLRIFGVRAYRQGYLGLETATEVIVPDFE-------LDNYVP 111

Query: 125 SKKKAFTKYT-------------KKYETDDGKKDIQAQLEKMKKYCTVI----------- 160
           SKK    K+T             K Y  +D ++ +   LE M K   ++           
Sbjct: 112 SKKGRGRKFTFYQFLGRRIATLPKDYTQEDFEQKL-GTLEDMIKEGEIVEVRALVSTQPW 170

Query: 161 ----RKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEG 216
               +KK  +ME  + G SV +K ++      K+I +  V ++ E++D+I VTKGKG +G
Sbjct: 171 VIKLKKKPEVMEYAIGGTSVEEKFNYIKERLGKEIRVGEVLKEGELLDVIAVTKGKGTQG 230

Query: 217 VVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK 275
            V RWG+     K  +G RKV  IG WHPARV +TV  AGQ G+HHRTE+NK++  +G+
Sbjct: 231 PVKRWGIKLRAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIGE 289


>gi|150402715|ref|YP_001330009.1| 50S ribosomal protein L3P [Methanococcus maripaludis C7]
 gi|166233157|sp|A6VHD2.1|RL3_METM7 RecName: Full=50S ribosomal protein L3P
 gi|150033745|gb|ABR65858.1| ribosomal protein L3 [Methanococcus maripaludis C7]
          Length = 334

 Score =  169 bits (428), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/279 (36%), Positives = 151/279 (54%), Gaps = 13/279 (4%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   PR GSL F PRKRA +   K++++P D   K   L AF  YKAG TH +     P 
Sbjct: 4   KKSRPRRGSLAFSPRKRAKKLVPKIRSWPAD---KKVGLQAFPVYKAGTTHALLIENNPK 60

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRF--YKNW 122
           S  + +E    VT++ETP + V G+  Y KT +GL++L  VWA+ L+ ++ R+    K  
Sbjct: 61  SPNNGQEVFTPVTVLETPDVTVAGIRLYEKTTKGLKALTEVWAEQLDNDLGRKLTLVKKE 120

Query: 123 CKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDF 182
            K    A     +K        +++  +    K   + +KK  ++EI++ G SVA+++ +
Sbjct: 121 EKKTADALDAVLEKAT------EVRVIVHTNPKTTGIPKKKPEVVEIRIGGSSVAERLAY 174

Query: 183 AYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPRKTHRGL-RKVACI 240
           A     K + I  VF+  E+ID + +TKGKG++G V RWG+  +  +   +G+ R    I
Sbjct: 175 AKEILGKTLAISDVFEAGEIIDTLAITKGKGFQGSVKRWGIKVQFGKHQRKGVGRHTGSI 234

Query: 241 GAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
           G W P RV +TV   GQ G+H RTE NK+I KLG    E
Sbjct: 235 GPWRPRRVMWTVPLPGQMGFHQRTEYNKRILKLGSEGAE 273


>gi|389848017|ref|YP_006350256.1| 50S ribosomal protein L3P [Haloferax mediterranei ATCC 33500]
 gi|388245323|gb|AFK20269.1| 50S ribosomal protein L3P [Haloferax mediterranei ATCC 33500]
          Length = 327

 Score =  169 bits (428), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/274 (36%), Positives = 151/274 (55%), Gaps = 12/274 (4%)

Query: 14  LGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 73
           +GF PRKRA +   ++K++P DD S P  L  F GYKAGMTH++   ++  S     E  
Sbjct: 1   MGFSPRKRAVKEVPRIKSWPDDDGS-PA-LQGFAGYKAGMTHVMMVNDEADSPREGMEES 58

Query: 74  EAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRF---YKNWCKSKKKAF 130
             VT++ETPP+  V +  Y +TP G++    VWA   ++E+ R      ++  +S   A 
Sbjct: 59  VPVTVVETPPMRAVALRAYEQTPYGMKPKTEVWASEFHDELDRVLDLPAEDTFESDADAL 118

Query: 131 TKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGFFEK- 189
            +  +  E DD +        ++K    V +KK  +ME +V GGS+ ++ DFA    E+ 
Sbjct: 119 REAVEAGEVDDLRVITHTVPAELK---NVPKKKPDVMETRVGGGSMVERADFALDLVEEG 175

Query: 190 -QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAWHPA 246
            +  +  VF+  E +D  GVTKGKG +G V RWGV +   K  R    R++  +G W+P+
Sbjct: 176 GEHEMSDVFRAGEYLDAAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPS 235

Query: 247 RVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           RV  TV + GQ GYH RTE+NK++  LG+    S
Sbjct: 236 RVRSTVPQLGQTGYHQRTELNKRLIDLGEGDDAS 269


>gi|119873281|ref|YP_931288.1| 50S ribosomal protein L3P [Pyrobaculum islandicum DSM 4184]
 gi|212288410|sp|A1RVG3.1|RL3_PYRIL RecName: Full=50S ribosomal protein L3P
 gi|119674689|gb|ABL88945.1| LSU ribosomal protein L3P [Pyrobaculum islandicum DSM 4184]
          Length = 342

 Score =  169 bits (427), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/281 (38%), Positives = 149/281 (53%), Gaps = 12/281 (4%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   PR GS+G  PRKRA+    +V+ +P+ +  KP  L  F  YKAGM H V   ++P 
Sbjct: 8   KINRPRRGSMGVYPRKRAADIVPRVRTWPEVNLGKPT-LLGFAAYKAGMLHAVVVEDRPT 66

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRG--LRSLCTVWAQHLNEEVRRRFYKNW 122
           S L+ KE  +AVT+++ PPL + G   Y   P     RS+  VWA  L   +RR      
Sbjct: 67  SPLYGKEVVKAVTVLDAPPLFIWGFRLYTLDPTNGYKRSIAEVWAPELPAYLRRVL---- 122

Query: 123 CKSKKKAFTKYTKKYET-DDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNG-GSVAQKV 180
              +K    K  KK E   D   D++A +        + +K   L+EI + G  SV +++
Sbjct: 123 TLPEKVDVDKQMKKVEEFKDVAVDVRALVATQPHLSGIGKKTPELLEIPIGGVPSVDERI 182

Query: 181 DFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVA 238
            FA     K +    VF   +++D+I VTKGKGY+GV+ R+GVT LPR  K  +G R+  
Sbjct: 183 KFAVSLLGKTVSPKEVFTAGQLVDVIAVTKGKGYQGVIKRFGVTILPRWHKHRKGHRRTG 242

Query: 239 CIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
            IG   PA V FT  R GQ G+H RTE NK+I K+G    E
Sbjct: 243 TIGPQAPA-VMFTQPRPGQMGFHQRTEYNKRIIKIGDNGAE 282


>gi|448592779|ref|ZP_21651826.1| 50S ribosomal protein L3P [Haloferax elongans ATCC BAA-1513]
 gi|445730805|gb|ELZ82392.1| 50S ribosomal protein L3P [Haloferax elongans ATCC BAA-1513]
          Length = 338

 Score =  169 bits (427), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 98/279 (35%), Positives = 153/279 (54%), Gaps = 12/279 (4%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GS+GF PRKRA++   ++K++P DD S    L  F GYKAGMTH++   ++  S   
Sbjct: 7   PRKGSMGFSPRKRATKEVPRIKSWPSDDGS--PALQGFAGYKAGMTHVMMVNDEADSPRE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRF---YKNWCKS 125
             E    VT++ETPP+  + +  Y +T  G++    VWA   ++E+ R      ++  + 
Sbjct: 65  GMEEAVPVTVVETPPMRAIALRAYEQTSYGMKPKTEVWASEFHDELDRVLDLPAEDTFEE 124

Query: 126 KKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYG 185
             +A  +  +  E DD +         +K    V +KK  +ME +V GGS+ ++ DFA  
Sbjct: 125 DAEALREAVEAGEVDDLRVITHTVPAGLK---NVPKKKPDVMETRVGGGSLVERADFALE 181

Query: 186 FFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIG 241
              +  +  +  VF+  E +D  GVTKGKG +G V RWGV +   K  R    R++  +G
Sbjct: 182 LVGEGGEHEMSDVFRAGEYLDAAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLG 241

Query: 242 AWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
            W+P+RV  TV + GQ GYH RTE+NK++  LG+  + +
Sbjct: 242 PWNPSRVRSTVPQLGQTGYHQRTELNKRLIDLGEGDEPT 280


>gi|429190344|ref|YP_007176022.1| 50S ribosomal protein L3 [Natronobacterium gregoryi SP2]
 gi|448326256|ref|ZP_21515623.1| 50S ribosomal protein L3P [Natronobacterium gregoryi SP2]
 gi|429134562|gb|AFZ71573.1| archaeal ribosomal protein L3 [Natronobacterium gregoryi SP2]
 gi|445612913|gb|ELY66630.1| 50S ribosomal protein L3P [Natronobacterium gregoryi SP2]
          Length = 339

 Score =  169 bits (427), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/289 (34%), Positives = 149/289 (51%), Gaps = 31/289 (10%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLGF PRKRA+    +  ++P DD  +P  L  F GYKAGMTH+V   ++  S   
Sbjct: 7   PRKGSLGFGPRKRATSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDQANSPTE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VTI+ETPP+  V +  Y  TP GL  +  VW     +E+ R            
Sbjct: 65  GMEQTVPVTIVETPPMRAVALRAYEDTPYGLNPVTEVWTDEFADELDR------------ 112

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMK-------------KYCTVIRKKAHLMEIQVNGGS 175
                   Y++D  + +++  LE+ +             +  ++ +KK  +ME +V GGS
Sbjct: 113 VLDLPGDDYDSDAAEDELRGLLEEGRVDDVRVITHTVPSEVPSMPKKKPDVMETRVGGGS 172

Query: 176 VAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 233
           V ++VDF         +  ++ VF+  E +D  GVTKGKG +G V RWGV +   K  R 
Sbjct: 173 VEERVDFGLELLVDGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHARQ 232

Query: 234 --LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
              R++  +G W+P+RV  TV + GQ GYH RTE+NK++  +G  +  +
Sbjct: 233 GWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDMGNGADAT 281


>gi|448392361|ref|ZP_21567135.1| 50S ribosomal protein L3P [Haloterrigena salina JCM 13891]
 gi|445664451|gb|ELZ17160.1| 50S ribosomal protein L3P [Haloterrigena salina JCM 13891]
          Length = 339

 Score =  169 bits (427), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/289 (35%), Positives = 150/289 (51%), Gaps = 31/289 (10%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLGF PRKRA+    +  ++P DD  +P  L  F GYKAGMTH+V   +K  S   
Sbjct: 7   PRKGSLGFGPRKRATSEVPRFNSWP-DDEGQPT-LQGFAGYKAGMTHVVMVDDKANSPTE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VTI+ETPP+  V +  Y +TP G++ +  VW      E+ R            
Sbjct: 65  GMEQTVPVTIVETPPMRAVALRAYEETPYGMKPVTEVWTDEFVPELDR------------ 112

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMK-------------KYCTVIRKKAHLMEIQVNGGS 175
                   Y+TD  + +++  LE+ +             +  +V +KK  +ME +V GGS
Sbjct: 113 VLDIPGDDYDTDAAEDELRGLLEQGRVDDVRVITHTVPSEIPSVPKKKPDVMETRVGGGS 172

Query: 176 VAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 233
           V  +VDFA        +  ++ VF+  E +D  GVTKGKG +G V RWGV +   K  R 
Sbjct: 173 VEDRVDFALETVADGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHARQ 232

Query: 234 --LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
              R++  +G W+P+RV  TV + GQ GYH RTE+NK++  +G  +  +
Sbjct: 233 GWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGADAT 281


>gi|448311980|ref|ZP_21501733.1| 50S ribosomal protein L3P [Natronolimnobius innermongolicus JCM
           12255]
 gi|445603601|gb|ELY57563.1| 50S ribosomal protein L3P [Natronolimnobius innermongolicus JCM
           12255]
          Length = 339

 Score =  169 bits (427), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/275 (36%), Positives = 145/275 (52%), Gaps = 7/275 (2%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLGF PRKRA+    +  ++P DD  +P  L  F GYKAGMTH+V   +K  S   
Sbjct: 7   PRKGSLGFGPRKRATSEVPRFNSWP-DDEGQPT-LQGFAGYKAGMTHVVMVDDKSNSPTE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VTI+ETPP+  V +  Y  TP G + +  VW      E+ R           +
Sbjct: 65  GMEQTVPVTIVETPPMRAVSLRAYEDTPYGKQPITEVWTDEFVPELDRTLDLPGDDYDAE 124

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMK-KYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGFF 187
           A  +  +    +    D++     +     +V +KK  +ME +V GGSV ++VDFA    
Sbjct: 125 AAEEELRNLLAEGRIDDVRVITHTVPGSVPSVPKKKPDVMETRVGGGSVGERVDFALELL 184

Query: 188 EK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAW 243
           E   +  ++ VF+  E +D  GVTKGKG +G V RWGV +   K  R    R++  +G W
Sbjct: 185 EDGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW 244

Query: 244 HPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ 278
           +P+RV  TV + GQ GYH RTE+NK++  +G  + 
Sbjct: 245 NPSRVRSTVPQQGQTGYHQRTELNKRLVDMGDGAD 279


>gi|242398279|ref|YP_002993703.1| 50S ribosomal protein L3P [Thermococcus sibiricus MM 739]
 gi|259709744|sp|C6A159.1|RL3_THESM RecName: Full=50S ribosomal protein L3P
 gi|242264672|gb|ACS89354.1| 50S ribosomal protein L3P [Thermococcus sibiricus MM 739]
          Length = 359

 Score =  169 bits (427), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/289 (37%), Positives = 156/289 (53%), Gaps = 23/289 (7%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           +   PR GSL + PRKRA     +++ +P++   +  R+  F GYKAGMTH++   + PG
Sbjct: 3   RISRPRRGSLAYSPRKRAKSIVPRIRKWPQE---QEVRMLGFAGYKAGMTHVLMIDDAPG 59

Query: 65  SKLHK-KETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHL---NEEVRR---- 116
             L K KE    VTI+E PPL+V G+  Y +   GL +   V        N   +R    
Sbjct: 60  --LTKGKEIFVPVTIVEAPPLMVYGIRAYKRGYFGLETATEVIVPDFKLENYPSKRAKNV 117

Query: 117 RFYKNWCKSKKKAFTKYTKKY------ETDDGKKDIQA----QLEKMKKYCTVIRKKAHL 166
            FYK   +  K     YT++       E +D  K  +      L   + +   I+KK  +
Sbjct: 118 TFYKLLERRIKTLPKNYTEEVFQQKLGELEDLVKTGEVVELRALVATQPWLARIKKKPEV 177

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           ME  V G S+ +K ++      K+I +  + Q+ E++DI+ VTKGKG +G V RWGV   
Sbjct: 178 MEYAVGGTSIEEKFNYIKEKLGKEIRVGEILQEGELLDIVAVTKGKGTQGPVKRWGVKLT 237

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK 275
             K  +G RKVA IG WHPARV +TV RAGQ G+HHRTE NK++ ++G+
Sbjct: 238 SHKDSKGRRKVATIGPWHPARVMWTVPRAGQMGFHHRTEFNKRLLRIGE 286


>gi|284165492|ref|YP_003403771.1| 50S ribosomal protein L3 [Haloterrigena turkmenica DSM 5511]
 gi|284015147|gb|ADB61098.1| ribosomal protein L3 [Haloterrigena turkmenica DSM 5511]
          Length = 339

 Score =  168 bits (426), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 102/289 (35%), Positives = 150/289 (51%), Gaps = 31/289 (10%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLGF PRKRA+    +  ++P DD  +P  L  F GYKAGMTH+V   +K  S   
Sbjct: 7   PRKGSLGFGPRKRATSEVPRFNSWP-DDEGQPT-LQGFAGYKAGMTHVVMVDDKANSPTE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VTI+ETPP+  V +  Y +TP G++ +  VW      E+ R            
Sbjct: 65  GMEQTVPVTIVETPPMRAVALRAYEETPYGMKPVTEVWTDEFVPELDR------------ 112

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMK-------------KYCTVIRKKAHLMEIQVNGGS 175
                   Y+TD  + +++  LE+ +             +  +V +KK  +ME +V GGS
Sbjct: 113 VLDIPGDDYDTDAAEDELRGLLEQGRVDDVRVITHTVPSEIPSVPKKKPDVMETRVGGGS 172

Query: 176 VAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 233
           V  ++DFA        +  ++ VF+  E +D  GVTKGKG +G V RWGV +   K  R 
Sbjct: 173 VEDRIDFALETVADGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHARQ 232

Query: 234 --LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
              R++  +G W+P+RV  TV + GQ GYH RTE+NK++  +G  +  +
Sbjct: 233 GWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGADAT 281


>gi|14591535|ref|NP_143617.1| 50S ribosomal protein L3P [Pyrococcus horikoshii OT3]
 gi|6094075|sp|O59418.1|RL3_PYRHO RecName: Full=50S ribosomal protein L3P
 gi|3258212|dbj|BAA30895.1| 362aa long hypothetical 50S ribosomal protein L3 [Pyrococcus
           horikoshii OT3]
          Length = 362

 Score =  168 bits (425), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 109/299 (36%), Positives = 155/299 (51%), Gaps = 40/299 (13%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   PR GSL F PRKRA     +++++PK+      R+  F GYKAGMTHI+   ++PG
Sbjct: 3   KIHRPRKGSLAFSPRKRAKSIVPRIRSWPKETE---VRMLGFAGYKAGMTHILMIDDEPG 59

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
              + KE    VTIIETPPL V G+  Y +   GL +   V               N+  
Sbjct: 60  LT-NGKEIFMPVTIIETPPLRVFGIRAYRQGYLGLETAGEVIVPDFE-------LDNYTP 111

Query: 125 SKKKAFTKYT-------------KKYETDDGKKDIQAQLEKMKKYCTVI----------- 160
           SKK    K+T             K Y  ++ ++ + A LE M K   ++           
Sbjct: 112 SKKGKGRKFTFYQFLGRRIATLPKDYTQEEFEQKLGA-LEDMIKEGEIVEVRALVSTQPW 170

Query: 161 ----RKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEG 216
               +KK  +ME  + G SV +K ++      K+I +  V ++ E++D+I VTKGKG +G
Sbjct: 171 VIKLKKKPEVMEYAIGGTSVEEKFNYIKEKLGKEIRVGEVLKEGELLDVIAVTKGKGTQG 230

Query: 217 VVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK 275
            V RWG+     K  +G RKV  IG WHPARV +TV  AGQ G+HHRTE+NK++  +G+
Sbjct: 231 PVKRWGIKLRAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIGE 289


>gi|448302866|ref|ZP_21492816.1| 50S ribosomal protein L3P [Natronorubrum sulfidifaciens JCM 14089]
 gi|445593873|gb|ELY48040.1| 50S ribosomal protein L3P [Natronorubrum sulfidifaciens JCM 14089]
          Length = 339

 Score =  168 bits (425), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 100/277 (36%), Positives = 148/277 (53%), Gaps = 7/277 (2%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLGF PR+RA+    +  ++P DD  +P  L  F GYKAGMTH+V   +K  S   
Sbjct: 7   PRKGSLGFGPRQRATSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDKANSPTE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VTI+ETPP+  V +  Y  TP G++ L  VW      E+ R            
Sbjct: 65  GMEETVPVTIVETPPMRAVALRVYEDTPYGMKPLTEVWTDEFAPELDRVLDLPGDDYDVD 124

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMK-KYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGFF 187
           A T   + Y  +    D++     +  +  ++ +KK  +ME +V GGS+ ++VDFA    
Sbjct: 125 AATDELRGYLEEGRVDDVRVITHTVPGEIPSMPKKKPDVMETRVGGGSLDERVDFALETV 184

Query: 188 EK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAW 243
           E   +  ++ +F+  E +D  GVTKGKG +G V RWGV +   K  R    R++  +G W
Sbjct: 185 EDGGEHVMNDMFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW 244

Query: 244 HPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           +P+RV  TV + GQ GYH RTE+NK++  +G  +  +
Sbjct: 245 NPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGADAT 281


>gi|84489708|ref|YP_447940.1| 50S ribosomal protein L3P [Methanosphaera stadtmanae DSM 3091]
 gi|109893523|sp|Q2NFV6.1|RL3_METST RecName: Full=50S ribosomal protein L3P
 gi|84373027|gb|ABC57297.1| 50S ribosomal protein L3P [Methanosphaera stadtmanae DSM 3091]
          Length = 337

 Score =  168 bits (425), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 103/274 (37%), Positives = 146/274 (53%), Gaps = 9/274 (3%)

Query: 8   HPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKL 67
            PR GS+ F PRKR +R   +V  +P+ D +    L AF GYK GMTH+     + GS  
Sbjct: 6   QPRKGSVAFSPRKRVARETPRVSTWPELDEAG---LLAFAGYKVGMTHVTALDSRKGSPT 62

Query: 68  HKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQ-HLNEEVRRRFYKNWCKSK 126
              E    VTI+E PPLVV+G+  Y KT  GL++L  V A  +L++E+ R+         
Sbjct: 63  ENMELSVPVTILEAPPLVVLGIRAYTKTTYGLKTLTDVIANDNLDDELSRKISVPKFDDI 122

Query: 127 KKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGF 186
           +    +   K +  D   +I+  +    K  +V +KK  ++E  + G SV  K+++A   
Sbjct: 123 EAKIEELRNKIDDID---EIRVLIHTKPKLTSVPKKKPEVLEFGLGGKSVEDKLEYAISI 179

Query: 187 FEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPRKTHRGL-RKVACIGAWH 244
             K+I    VFQ+ E  D I  TKGKG +G V R+GV  +  +    G+ R V  IG W 
Sbjct: 180 LGKEITPQDVFQEGEYTDAIATTKGKGVQGPVKRFGVRIQYGKAARSGIERHVGSIGPWT 239

Query: 245 PARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ 278
           P R  +TVA  GQ GYH RTE NKK+ K+G  S+
Sbjct: 240 PNRTMWTVAMQGQMGYHKRTEYNKKLLKIGDESE 273


>gi|188529359|gb|ACD62425.1| ribosomal protein L3 [Drosophila silvestris]
          Length = 207

 Score =  168 bits (425), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 83/147 (56%), Positives = 106/147 (72%), Gaps = 7/147 (4%)

Query: 161 RKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTR 220
           +KKAH+MEIQ+NGGSV  KV +     EK I +  VF +DEM+D +GVTKGKG++GV +R
Sbjct: 7   QKKAHIMEIQLNGGSVEDKVKWVRENLEKPIQVCNVFGQDEMVDCVGVTKGKGFKGVTSR 66

Query: 221 WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE- 279
           W   +LPRKTH+GLRKV CIGAWHP+RVS TVARAGQ GYHHRTE+NKKIY++G      
Sbjct: 67  WHTKKLPRKTHKGLRKVXCIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGVHTK 126

Query: 280 -----SHSAMTEFDRSVYLLSSLMGSF 301
                 ++A TE+D +   ++  MG F
Sbjct: 127 DGKVIKNNASTEYDLTDKSITP-MGGF 152


>gi|448309694|ref|ZP_21499550.1| 50S ribosomal protein L3P [Natronorubrum bangense JCM 10635]
 gi|445589551|gb|ELY43781.1| 50S ribosomal protein L3P [Natronorubrum bangense JCM 10635]
          Length = 339

 Score =  168 bits (425), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 100/277 (36%), Positives = 148/277 (53%), Gaps = 7/277 (2%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLGF PR+RA+    +  ++P DD  +P  L  F GYKAGMTH+V   +K  S   
Sbjct: 7   PRKGSLGFGPRQRATSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDKANSPTE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VTI+ETPP+  V +  Y  TP G++ L  VW      E+ R            
Sbjct: 65  GMEETVPVTIVETPPMRAVALRVYEDTPYGMKPLTEVWTDEFVPELDRVLDLPGDDYDVD 124

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMK-KYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGFF 187
           A T   + Y  +    D++     +  +  ++ +KK  +ME +V GGS+ ++VDFA    
Sbjct: 125 AATDELRGYLEEGRIDDVRVITHTVPGEVPSMPKKKPDVMETRVGGGSIEERVDFALETV 184

Query: 188 EK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAW 243
           E   +  ++ +F+  E +D  GVTKGKG +G V RWGV +   K  R    R++  +G W
Sbjct: 185 EDGGEHVMNDMFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW 244

Query: 244 HPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           +P+RV  TV + GQ GYH RTE+NK++  +G  +  +
Sbjct: 245 NPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGADAT 281


>gi|18978197|ref|NP_579554.1| 50S ribosomal protein L3P [Pyrococcus furiosus DSM 3638]
 gi|397652527|ref|YP_006493108.1| 50S ribosomal protein L3P [Pyrococcus furiosus COM1]
 gi|42559663|sp|Q8TZZ8.1|RL3_PYRFU RecName: Full=50S ribosomal protein L3P
 gi|428697961|pdb|3J21|C Chain C, Promiscuous Behavior Of Proteins In Archaeal Ribosomes
           Revealed By Cryo-em: Implications For Evolution Of
           Eukaryotic Ribosomes (50s Ribosomal Proteins)
 gi|18894006|gb|AAL81949.1| LSU ribosomal protein L3P [Pyrococcus furiosus DSM 3638]
 gi|393190118|gb|AFN04816.1| 50S ribosomal protein L3P [Pyrococcus furiosus COM1]
          Length = 365

 Score =  168 bits (425), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 112/312 (35%), Positives = 158/312 (50%), Gaps = 38/312 (12%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   PR GSLGF PRKRA     +++++PK+      R+  F GYKAGMTHI+   ++PG
Sbjct: 3   KVHRPRRGSLGFSPRKRAKSIVPRIRSWPKETE---VRMLGFAGYKAGMTHILMIDDEPG 59

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHL---NEEVRRR---- 117
              + KE    VTIIETPPL V G+  Y     GL +   V        N   + R    
Sbjct: 60  LT-NGKEIFMPVTIIETPPLRVFGIRAYRMGYLGLETATEVIVPDFPLDNYPAKERKGKP 118

Query: 118 -----FYKNWCKSKKKAFTKYTKK-YETDDGKKDIQAQLEKMKK---------------Y 156
                FYK   +        YT++ +E   G      QLE M K               +
Sbjct: 119 KPKMTFYKLLERRIATLPKNYTQEMFEQKLG------QLEDMIKEGEIVDVRAIVATQPW 172

Query: 157 CTVIRKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEG 216
              ++KK  +ME  + G SV +K ++      K++ +  V ++ E++D+I VTKGKG +G
Sbjct: 173 VIKLKKKPEVMEYAIGGTSVEEKFNYIKEKLGKELRVGEVLKEGELLDVIAVTKGKGTQG 232

Query: 217 VVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA 276
            V RWG+     K  +G RKV  IG WHPARV +TV  AGQ G+HHRTE+NK++  +G+ 
Sbjct: 233 PVKRWGIKLRAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIGEN 292

Query: 277 SQESHSAMTEFD 288
            +      TE +
Sbjct: 293 GKLKLDENTEIE 304


>gi|315229856|ref|YP_004070292.1| 50S ribosomal protein L3e (L3p) [Thermococcus barophilus MP]
 gi|315182884|gb|ADT83069.1| LSU ribosomal protein L3e (L3p) [Thermococcus barophilus MP]
          Length = 346

 Score =  167 bits (424), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/280 (37%), Positives = 151/280 (53%), Gaps = 18/280 (6%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   PR GSL + PRKRA     +++ +P+++     RL  F GYKAGMTHI+   ++PG
Sbjct: 3   KISKPRRGSLAYSPRKRAKSIVPRIRKWPQEEE---VRLLGFAGYKAGMTHILMIDDRPG 59

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRR---FYKN 121
                KE    VTI+ETPP+VV G+  Y +   GL +   VW  +LN +++RR     KN
Sbjct: 60  LT-KGKEIFMPVTIVETPPMVVFGIRAYKQGYLGLETATEVWIPNLNPDLKRRIKTLPKN 118

Query: 122 W----CKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVA 177
           +     + K        K  E  + +  +  Q   +K     ++KK  +ME  V G SV 
Sbjct: 119 YDEGAFQQKLGELEDLVKSGEIVEVRALVHTQPRLIK-----LKKKPEVMEYAVGGKSVE 173

Query: 178 QKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--R 235
            K  +      K+I    V ++ E++D+I VTKGKG +G V RWG+     K  R    R
Sbjct: 174 DKFAYLKEKLGKEIRAKEVLKEGELLDVIAVTKGKGTQGPVKRWGIKIQFHKAQRAGKGR 233

Query: 236 KVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK 275
            V  +G WHPARV +TV +AGQ G+HHRTE NK++  +G+
Sbjct: 234 HVGNLGPWHPARVMWTVPQAGQMGFHHRTEFNKRLIAIGE 273


>gi|449707707|gb|EMD47318.1| 60S ribosomal protein L3, partial [Entamoeba histolytica KU27]
          Length = 168

 Score =  167 bits (424), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 82/165 (49%), Positives = 109/165 (66%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSL F PRKR  + R  V AFPKD+ ++   LT FLG+KAGMTH++R+V
Sbjct: 1   MSHRKFEAPRHGSLAFHPRKRVHKVRATVSAFPKDNAAEKPHLTGFLGFKAGMTHVIREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++  +KL K    E VTIIETPP+VV G VGY KT  GL+ +  V+A+H+ +E +RR+ K
Sbjct: 61  KRTNTKLPKDGVLEPVTIIETPPMVVAGFVGYKKTTTGLKPITAVFAEHIADEFKRRYTK 120

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAH 165
            W K+ K  F  +T+KY     K   + Q+  +K  C V+R  AH
Sbjct: 121 KWYKNTKNQFAVHTEKYNDVKAKSKRERQIRLIKNRCDVVRVIAH 165


>gi|322372168|ref|ZP_08046709.1| 50S ribosomal protein L3P [Haladaptatus paucihalophilus DX253]
 gi|320548177|gb|EFW89850.1| 50S ribosomal protein L3P [Haladaptatus paucihalophilus DX253]
          Length = 338

 Score =  167 bits (423), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 101/277 (36%), Positives = 143/277 (51%), Gaps = 8/277 (2%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLGF PRKRA+    +  ++P  D  +P  L  F GYKAGMTH+V   ++  S   
Sbjct: 7   PRKGSLGFGPRKRATSEVPRFNSWPDSD-GQPS-LQGFAGYKAGMTHVVMVNDEANSPRE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VTI+ETPP+  V +  Y  TP G + +  VW    ++E+ R            
Sbjct: 65  GMEETVPVTIVETPPMRAVALRAYEDTPYGKKPMTEVWGSEFHDELDRTLNVPENHDADA 124

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYC-TVIRKKAHLMEIQVNGGSVAQKVDFAYGFF 187
           A  +     E  D   D++     +      V +K+  +ME +V GGS++ + DFA    
Sbjct: 125 AEDELRAAIEAGD-VADLRVITHTVPSDLKNVPKKRPDVMETRVGGGSISDRADFALELL 183

Query: 188 EK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAW 243
           E   +  I  VF+  E +D  GVTKGKG +G V RWGV +   K  R    R++  +G W
Sbjct: 184 EDGGEHDITDVFRAGEYLDTSGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW 243

Query: 244 HPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           +P+RV  TV + GQ GYH RTE+NK++  LG   + S
Sbjct: 244 NPSRVRSTVPQLGQTGYHQRTELNKRLISLGDDDEAS 280


>gi|448415419|ref|ZP_21578219.1| 50S ribosomal protein L3P [Halosarcina pallida JCM 14848]
 gi|445681077|gb|ELZ33518.1| 50S ribosomal protein L3P [Halosarcina pallida JCM 14848]
          Length = 338

 Score =  167 bits (422), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 98/279 (35%), Positives = 146/279 (52%), Gaps = 12/279 (4%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GS+G+ PR RA++   ++K++P DD S    L  F GYKAGMT ++   ++  S   
Sbjct: 7   PRKGSMGYGPRTRATKEVPRIKSWPDDDGS--PALQGFAGYKAGMTQVMMVNDESNSPRE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRF---YKNWCKS 125
             E    VT++ETPP+  V +  Y  TP G + L  VWA   +E + R      ++    
Sbjct: 65  GMEEAVPVTVVETPPMRAVALRAYEDTPYGTKPLTEVWASEFDENLDRALDLPSEDTFDD 124

Query: 126 KKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYG 185
                    +  E DD +         MK    + +KK  +ME +V GGS+  +VDFA  
Sbjct: 125 DADDLRSALEAGEVDDVRVITHTVPAGMK---NIPKKKPDIMETRVGGGSLDDRVDFALD 181

Query: 186 FFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIG 241
              +  +  +  VF+  E +D+ GVTKGKG +G V RWGV +   K  R    R++  +G
Sbjct: 182 LVGEGGEHAMSDVFRAGEYMDVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLG 241

Query: 242 AWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
            W+P+RV  TV + GQ GYH RTE+NK++  +G   + S
Sbjct: 242 PWNPSRVRSTVPQLGQTGYHQRTELNKRLVDIGDGDEAS 280


>gi|284162460|ref|YP_003401083.1| 50S ribosomal protein L3 [Archaeoglobus profundus DSM 5631]
 gi|284012457|gb|ADB58410.1| ribosomal protein L3 [Archaeoglobus profundus DSM 5631]
          Length = 332

 Score =  167 bits (422), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 104/285 (36%), Positives = 152/285 (53%), Gaps = 25/285 (8%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K+  PR GSL F PRKRA     +++++P D   +P +L  F GYKAGMTH++   ++  
Sbjct: 2   KYSRPRRGSLAFSPRKRAKDVIPRIRSWP-DYEGEP-KLLGFAGYKAGMTHVIMIDDRKN 59

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
           S  + +E    VT++E PP+ V G+  Y  T  GL+    VW   L+E + RR       
Sbjct: 60  SPTYGEEIVVPVTVLECPPMKVAGIRVYKNTMYGLQIAKEVWTTELDEHLSRRL------ 113

Query: 125 SKKKAFTKYTKKYETD-DGKKDIQAQLE-KMKKYCT------VIRKKAHLMEIQVNGGSV 176
                     KK  TD +  K+++   E ++  Y        V  K   +ME +V G  +
Sbjct: 114 -------PLPKKINTDVESLKNVENIAEVRLITYTQPYLITGVPSKTPDVMEYKVGGSDI 166

Query: 177 AQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL-- 234
              +D+A     K+I +  VFQ+   ID+I +TKGKG++G V RWGV  L  K  R    
Sbjct: 167 NAVLDYAISKLGKEIRVSEVFQEGAFIDVIAITKGKGFQGPVKRWGVITLDAKHARSSKH 226

Query: 235 RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
           R+V  +G W P RV +TV +AGQ G+H RTE NK+I K+G+  +E
Sbjct: 227 RRVGTLGPWTPHRVRWTVPQAGQMGFHQRTEYNKRIIKIGENGEE 271


>gi|435848748|ref|YP_007310998.1| LSU ribosomal protein L3P [Natronococcus occultus SP4]
 gi|433675016|gb|AGB39208.1| LSU ribosomal protein L3P [Natronococcus occultus SP4]
          Length = 339

 Score =  167 bits (422), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 101/277 (36%), Positives = 145/277 (52%), Gaps = 7/277 (2%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLGF PR+RAS    +  ++P DD  +P  L  F GYKAGMTH+V   ++  S   
Sbjct: 7   PRKGSLGFGPRQRASSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDEANSPTE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VTI+ETPP+  V +  Y  TP G + L  VW      E+ R            
Sbjct: 65  GMEETVPVTIVETPPMRAVALRAYEDTPYGKKPLTEVWTGEFVPELDRVLDLPGDDYDAD 124

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKM-KKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGFF 187
           A     + Y  D    D++     +  +  ++ +KK  +ME +V GGSV ++VDFA    
Sbjct: 125 AAEDELRGYLEDGRIADVRVITHTVPSEVPSIPKKKPDVMETRVGGGSVEERVDFALELL 184

Query: 188 EK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAW 243
               +  ++ VF+  E +D  GVTKGKG +G V RWGV +   K  R    R++  +G W
Sbjct: 185 ADGGEHVMNDVFRAGEYLDASGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW 244

Query: 244 HPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           +P+RV  TV + GQ GYH RTE+NK++  +G  +  +
Sbjct: 245 NPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGADAT 281


>gi|171185278|ref|YP_001794197.1| 50S ribosomal protein L3P [Pyrobaculum neutrophilum V24Sta]
 gi|212288414|sp|B1YD88.1|RL3_THENV RecName: Full=50S ribosomal protein L3P
 gi|170934490|gb|ACB39751.1| ribosomal protein L3 [Pyrobaculum neutrophilum V24Sta]
          Length = 338

 Score =  166 bits (421), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 105/281 (37%), Positives = 147/281 (52%), Gaps = 12/281 (4%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   PR GS+G  PRKRA+    +V+ +P+ +  KP  L  F  YKAGM H V   ++P 
Sbjct: 4   KINRPRRGSMGVYPRKRAADIVPRVRTWPEVNLGKPA-LLGFAAYKAGMLHAVVVEDRPT 62

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRG--LRSLCTVWAQHLNEEVRRRFYKNW 122
           S L+ KE    VT+++ PPL + G   Y   P     RS+  VWA  L   +RR      
Sbjct: 63  SPLYGKEVVRPVTVLDAPPLFIWGFRLYTLDPTNGYRRSIAEVWAPELPAYIRRVL---- 118

Query: 123 CKSKKKAFTKYTKKYET-DDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNG-GSVAQKV 180
              +K    K  KK E   D   D++A +        + +K   L+EI + G  SV +++
Sbjct: 119 TLPEKADVDKQMKKVEEFKDVAVDVRALVATQPHLSGIGKKTPELLEIPIGGVPSVDERI 178

Query: 181 DFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVA 238
            FA     K +    VF   +++D+I VTKGKGY+GV+ R+GVT LPR  K  +G R+  
Sbjct: 179 KFAVSLLGKTVSPKEVFTAGQLVDVIAVTKGKGYQGVIKRFGVTILPRWHKHRKGHRRTG 238

Query: 239 CIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
            IG   PA + FT  R GQ G+H RTE NK++ K+G    E
Sbjct: 239 TIGPQAPA-LMFTQPRPGQMGFHQRTEYNKRVVKIGDNGAE 278


>gi|261403779|ref|YP_003248003.1| 50S ribosomal protein L3P [Methanocaldococcus vulcanius M7]
 gi|261370772|gb|ACX73521.1| ribosomal protein L3 [Methanocaldococcus vulcanius M7]
          Length = 335

 Score =  166 bits (420), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/278 (35%), Positives = 150/278 (53%), Gaps = 12/278 (4%)

Query: 6   FEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGS 65
              PR GSL F PRKRA R   +++++P ++     RL AF  YKAGM+H     +   S
Sbjct: 5   INRPRRGSLAFSPRKRAKRPVPRIRSWPDEEA---VRLQAFPVYKAGMSHAFIKEDNQKS 61

Query: 66  KLHKKETCEAVTIIETPPLVVVGVVGYVKTPRG-LRSLCTVWAQHLNEEVRRRFYKNWCK 124
               +E    +TI+E PP+ V  +  Y +  R  L +L  VWA +L++E+ R+       
Sbjct: 62  PKAGQEVFTPITILEAPPINVCAIRVYGRNERNYLTTLTEVWADNLDKELERKI-----N 116

Query: 125 SKKKAFTKYTKKYET-DDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFA 183
             KK   K     E   D  +D++  +    K   + +KK  ++EI++ G  + +++++A
Sbjct: 117 LPKKEERKTVDDLEAIKDKIEDVRVLVHTNPKLTCLPKKKPEILEIRIGGKDIEERLNYA 176

Query: 184 YGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPRKTHRGL-RKVACIG 241
                KQ+ I  VFQ+ E+ D IG+TKGKG++G V RWGV  +  +   +G+ R V  IG
Sbjct: 177 KEILGKQLNITDVFQEGELADTIGITKGKGFQGQVKRWGVKIQFGKHARKGVGRHVGSIG 236

Query: 242 AWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
            W P  + +TV   GQ GYH RTE NK+I K+G   +E
Sbjct: 237 PWQPKMIMWTVPMPGQMGYHQRTEYNKRILKIGNNGEE 274


>gi|448315112|ref|ZP_21504765.1| 50S ribosomal protein L3P [Natronococcus jeotgali DSM 18795]
 gi|445612371|gb|ELY66097.1| 50S ribosomal protein L3P [Natronococcus jeotgali DSM 18795]
          Length = 339

 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/277 (36%), Positives = 145/277 (52%), Gaps = 7/277 (2%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLGF PR+RAS    +  ++P DD  +P  L  F GYKAGMTH+V   +K  S   
Sbjct: 7   PRKGSLGFGPRQRASSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDKANSPTE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VTI+ETPP+  V +  Y  TP G + L  VW      E+ R            
Sbjct: 65  GMEETVPVTIVETPPMRAVALRAYEDTPYGKKPLTEVWTDEFVPELDRVLDLPGDDYDAD 124

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKM-KKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGFF 187
           A     + Y  D    D++     +  +  ++ +KK  +ME +V GGSV ++++FA    
Sbjct: 125 AAEDELRGYLEDGRIADVRVITHTVPSEVPSIPKKKPDVMETRVGGGSVEERLEFALEVL 184

Query: 188 EK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAW 243
               +  ++ VF+  E +D  GVTKGKG +G V RWGV +   K  R    R++  +G W
Sbjct: 185 ADGGEHVLNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW 244

Query: 244 HPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           +P+RV  TV + GQ GYH RTE+NK++  +G  +  +
Sbjct: 245 NPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGADAT 281


>gi|15678033|ref|NP_275147.1| 50S ribosomal protein L3P [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|3122720|sp|O26110.1|RL3_METTH RecName: Full=50S ribosomal protein L3P
 gi|2621048|gb|AAB84521.1| ribosomal protein L3 (E.coli ) [Methanothermobacter
           thermautotrophicus str. Delta H]
          Length = 337

 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/274 (35%), Positives = 147/274 (53%), Gaps = 9/274 (3%)

Query: 8   HPRHGSLGFLPRKRASRHRGKVKAFPK-DDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSK 66
            PR GS+ F PRKRA+R   +VK++P+ D+P     L A  GYKAGMTH++    +  S 
Sbjct: 6   QPRKGSVAFSPRKRAARETPRVKSWPQVDEPG----LLALAGYKAGMTHVMMVDNQKNSP 61

Query: 67  LHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSK 126
               E    VTI+E PPL V+ V  Y KT RGL++L  V A    +++RR+         
Sbjct: 62  TEGMEVSTPVTILEVPPLTVMAVRTYEKTSRGLKTLGEVLATETKDDLRRKLTPPADDYD 121

Query: 127 KKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGF 186
           ++A  +  K     +   D++  +    +  +V +KK  + E  + G +  +K ++A   
Sbjct: 122 QEAAIE--KIRSNMEYVADVRVIVHTNPRLASVPKKKPEVFECGLGGKTPEEKFEYALEI 179

Query: 187 FEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGAWH 244
             K +    +F +   +D I VTKGKG++G V RWG+     K  R    R +  +G W 
Sbjct: 180 LGKDVRASEIFSEGAFVDAIAVTKGKGFQGPVKRWGIRIQYGKAARSSKGRHIGSLGPWT 239

Query: 245 PARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ 278
           P+R  +TV +AGQ GYH RTE NK+I K+G AS+
Sbjct: 240 PSRTMWTVPQAGQMGYHRRTEYNKQILKIGDASE 273


>gi|18313001|ref|NP_559668.1| 50S ribosomal protein L3P [Pyrobaculum aerophilum str. IM2]
 gi|42559672|sp|Q8ZW52.1|RL3_PYRAE RecName: Full=50S ribosomal protein L3P
 gi|18160502|gb|AAL63850.1| ribosomal protein L3 [Pyrobaculum aerophilum str. IM2]
          Length = 338

 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/281 (37%), Positives = 151/281 (53%), Gaps = 12/281 (4%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   PR GS+G  PRKRA+    +V+ +P+ +  KP  L  F  YKAGM H V   ++P 
Sbjct: 4   KINRPRRGSMGVYPRKRAADIVPRVRTWPEVNLGKPA-LLGFAAYKAGMLHAVVVDDRPT 62

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRG--LRSLCTVWAQHLNEEVRRRFYKNW 122
           S L+ KE  +AVT+++ PPL V G   Y   P     R++  VWA  L + + R      
Sbjct: 63  SPLYGKEVVKAVTVLDAPPLYVWGFRLYTLDPTNGYKRAVAEVWASELPKFLHRVL---- 118

Query: 123 CKSKKKAFTKYTKKYET-DDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNG-GSVAQKV 180
              +K    K  KK E   D   D++A +        + +K   L+EI + G  SV +++
Sbjct: 119 TLPEKLDVDKQLKKVEEFRDVAVDVRALVATQPHLSGIGKKTPELLEIPIGGVPSVDERI 178

Query: 181 DFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVA 238
           +FA     K +    VF   +++D+I VTKGKGY+GV+ R+GVT LPR  K  +G R+  
Sbjct: 179 NFAISLLGKTVSPKDVFTPGQLVDVIAVTKGKGYQGVIKRFGVTILPRWHKHRKGHRRTG 238

Query: 239 CIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
            IG   PA V FT  R GQ G+H RTE NK++ K+G+   E
Sbjct: 239 TIGPQAPA-VMFTQPRPGQMGFHQRTEYNKRLLKIGENGAE 278


>gi|150401236|ref|YP_001325002.1| 50S ribosomal protein L3P [Methanococcus aeolicus Nankai-3]
 gi|166233154|sp|A6UV68.1|RL3_META3 RecName: Full=50S ribosomal protein L3P
 gi|150013939|gb|ABR56390.1| ribosomal protein L3 [Methanococcus aeolicus Nankai-3]
          Length = 333

 Score =  165 bits (418), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 95/277 (34%), Positives = 151/277 (54%), Gaps = 10/277 (3%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   PR GSL F PRKRA R   K++++P+ +     +L AF  YKAG TH +     P 
Sbjct: 4   KRNRPRRGSLAFSPRKRAKRPVPKIRSWPERET---VKLLAFPVYKAGTTHALYKENNPK 60

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
           S    ++    VT++E P + + G+  Y K  +GL++L  VWA   ++E+ R+   N  K
Sbjct: 61  SPNADQDVFTPVTVMEAPDITIAGIRAYGKDTKGLKALTEVWADSFDKELGRKI--NLPK 118

Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAY 184
             K    K     E  D   +++A +    K   + +KK  ++EI++ G +++  + +A 
Sbjct: 119 EPKANTEKLD---EVADKIVEVRAIVHTNPKDTNLPKKKPEIIEIKIGGKNISDIIAYAK 175

Query: 185 GFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPRKTHRGL-RKVACIGA 242
               K++ I+ VF   E ID + +TKGKG++G V RWG+  +  +  ++G+ R    IG 
Sbjct: 176 DIIGKKLSINDVFTGGEFIDTVAITKGKGFQGPVKRWGIKIQFGKHQNKGVGRHTGSIGP 235

Query: 243 WHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
           W P R+ +TV  AGQ G+H RTE NK+I K+G+   E
Sbjct: 236 WTPKRIMWTVPMAGQVGFHQRTEYNKRILKIGENGSE 272


>gi|26245428|gb|AAN77574.1| ribosomal protein L3 [Fundulus heteroclitus]
          Length = 154

 Score =  165 bits (418), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 86/154 (55%), Positives = 117/154 (75%), Gaps = 14/154 (9%)

Query: 75  AVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYT 134
           AVTI+ETPP+VVVGVVGYV TPRGLRS  T++++H+++E +RRFY+NW KSKKKAFTKY 
Sbjct: 1   AVTIVETPPMVVVGVVGYVSTPRGLRSFKTIFSEHMSDECKRRFYRNWYKSKKKAFTKYC 60

Query: 135 KKYETDDGKKDIQAQLEKMKKYCTVIR--------------KKAHLMEIQVNGGSVAQKV 180
           KK++ ++GKK ++     MKKYC V+R              KK+HLME+Q+NGG+++ KV
Sbjct: 61  KKWQDEEGKKQLEKDFSAMKKYCQVVRVIAHTQMRLLPLRQKKSHLMEVQLNGGTISDKV 120

Query: 181 DFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGY 214
           D+A    E+Q+ + AVF +DEMID+IGVTKG G+
Sbjct: 121 DWAREKLEQQVAVSAVFSQDEMIDVIGVTKGHGW 154


>gi|20093853|ref|NP_613700.1| 50S ribosomal protein L3P [Methanopyrus kandleri AV19]
 gi|42559662|sp|Q8TY90.1|RL3_METKA RecName: Full=50S ribosomal protein L3P
 gi|19886782|gb|AAM01630.1| Ribosomal protein L3 [Methanopyrus kandleri AV19]
          Length = 361

 Score =  165 bits (418), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/270 (35%), Positives = 146/270 (54%), Gaps = 8/270 (2%)

Query: 13  SLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKET 72
           SL F PRKRASR   +++++P ++     R+  F GYKAGMTH +   + P S    +E 
Sbjct: 16  SLAFSPRKRASRPVPRIRSWPDEER---VRVQGFAGYKAGMTHAIMIDDWPNSPTEGEEI 72

Query: 73  CEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTK 132
              VTI++ PP+ V  +  Y  TP G R +   WA+   E    R +      +     K
Sbjct: 73  SVPVTILDAPPMYVAAIRAYAPTPDGYRCVTEAWAEIPEELEMDRVFTVPKDGEAGDLDK 132

Query: 133 YTKKYETDDG-KKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGFFEKQI 191
             +    D+G  ++I+  +    K   V +KK  +ME ++ G  V ++ ++A     ++I
Sbjct: 133 IEEL--VDEGIVEEIRVIVATQPKKAGVPKKKPDVMEYRIGGKDVRERFEYAVEILSEEI 190

Query: 192 PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGAWHPARVS 249
               VF + E++D+  +TKGKG++GVV RWGVT   RKT R    R +  IG   P+RV 
Sbjct: 191 RAKDVFDEGEIVDVSAITKGKGFQGVVKRWGVTIQDRKTQRKQKGRHIGSIGPITPSRVR 250

Query: 250 FTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
           +TV  AGQ GYH RTE NK+I K+G+  +E
Sbjct: 251 WTVPMAGQVGYHQRTEHNKRILKIGEDGEE 280


>gi|313125790|ref|YP_004036060.1| 50S ribosomal protein L3 [Halogeometricum borinquense DSM 11551]
 gi|448285629|ref|ZP_21476870.1| 50S ribosomal protein L3P [Halogeometricum borinquense DSM 11551]
 gi|312292155|gb|ADQ66615.1| LSU ribosomal protein L3P [Halogeometricum borinquense DSM 11551]
 gi|445576265|gb|ELY30722.1| 50S ribosomal protein L3P [Halogeometricum borinquense DSM 11551]
          Length = 338

 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/277 (35%), Positives = 144/277 (51%), Gaps = 12/277 (4%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GS+ + PR+RA++   +++++P DD S    L  F GYKAGMT ++   ++  S   
Sbjct: 7   PRKGSMAYSPRQRAAKEVPRIRSWPDDDGS--PGLQGFAGYKAGMTQVMMVNDEANSPRE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRF---YKNWCKS 125
             E    VT++ETPP+  V V  Y  TP G + L  VWA    E + R      ++  + 
Sbjct: 65  GMEEAVPVTVVETPPMRAVAVRAYEDTPYGAKPLTEVWASEFVENLDRTLDLPSEDTFEE 124

Query: 126 KKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYG 185
                    +  E DD +         MK    + +KK  +ME +V GGS+ ++ DFA  
Sbjct: 125 DADDLRAAVEAGEVDDIRVITHTVPASMK---NIPKKKPDVMETRVGGGSLQERSDFALD 181

Query: 186 FFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIG 241
             E+  +  +  VF+  E +D  GVTKGKG +G V RWGV +   K  R    R++  +G
Sbjct: 182 LVEEGGEHSMSDVFRAGEYLDAAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLG 241

Query: 242 AWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ 278
            W+P+RV  TV + GQ GYH RTE+NK++  LG    
Sbjct: 242 PWNPSRVRSTVPQLGQTGYHQRTELNKRLIDLGDGDD 278


>gi|222480857|ref|YP_002567094.1| 50S ribosomal protein L3P [Halorubrum lacusprofundi ATCC 49239]
 gi|222453759|gb|ACM58024.1| ribosomal protein L3 [Halorubrum lacusprofundi ATCC 49239]
          Length = 338

 Score =  164 bits (416), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/280 (35%), Positives = 148/280 (52%), Gaps = 14/280 (5%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLG+ PR RA R   +++++P DD   P  L  F GYKAGMTH+V   ++  S   
Sbjct: 7   PRKGSLGYGPRTRADREVPRIRSWPDDD-GAPA-LQGFAGYKAGMTHVVMVNDEANSPRE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             ET   VT++ETPP+  V +  Y +TP G + +  VWA   +EE+ R          + 
Sbjct: 65  GMETSVPVTVVETPPMYAVALRAYEQTPYGKKPVEEVWATEFHEELDRAL----DLPAED 120

Query: 129 AFTKYTKKYET--DDGK-KDIQAQLEKM-KKYCTVIRKKAHLMEIQVNGGSVAQKVDFAY 184
            F +   +     D+G   D++     +  +   V +KK  +ME +V GGS+ ++VDF  
Sbjct: 121 TFEEDADELRALLDEGAVDDVRVITHTVPSELANVPKKKPDVMETRVGGGSLEERVDFGL 180

Query: 185 GFFEKQIP--IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACI 240
               +        VF+  +  D+ G+TKGKG +G V RWGV +   K  R    R++  +
Sbjct: 181 DLVAEGGAHEFGDVFRAGQYTDVSGITKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNL 240

Query: 241 GAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           G W+P+RV  TV + GQ GYH RTE+NK++   G+    S
Sbjct: 241 GPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDFGEGDDAS 280


>gi|448460077|ref|ZP_21596997.1| 50S ribosomal protein L3P [Halorubrum lipolyticum DSM 21995]
 gi|445807795|gb|EMA57876.1| 50S ribosomal protein L3P [Halorubrum lipolyticum DSM 21995]
          Length = 338

 Score =  164 bits (416), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/280 (35%), Positives = 148/280 (52%), Gaps = 14/280 (5%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLG+ PR RA R   +++++P DD   P  L  F GYKAGMTH+V   ++  S   
Sbjct: 7   PRKGSLGYGPRTRADREVPRIRSWPDDD-GAPA-LQGFAGYKAGMTHVVMVNDEANSPRE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             ET   VT++ETPP+  V +  Y +TP G + +  VWA   +EE+ R          + 
Sbjct: 65  GMETSVPVTVVETPPMYAVALRAYEQTPYGKKPVEEVWATEFHEELDRAL----DLPAED 120

Query: 129 AFTKYTKKYET--DDGK-KDIQAQLEKM-KKYCTVIRKKAHLMEIQVNGGSVAQKVDFAY 184
            F +   +     D+G   D++     +  +   V +KK  +ME +V GGS+ ++VDF  
Sbjct: 121 TFEEDADELRALLDEGAVDDVRVITHTVPSELANVPKKKPDVMETRVGGGSLEERVDFGL 180

Query: 185 GFFEKQIP--IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACI 240
               +        VF+  +  D+ G+TKGKG +G V RWGV +   K  R    R++  +
Sbjct: 181 DLVAEGGAHEFGDVFRAGQYTDVSGITKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNL 240

Query: 241 GAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           G W+P+RV  TV + GQ GYH RTE+NK++   G+    S
Sbjct: 241 GPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDFGEGDDAS 280


>gi|448369939|ref|ZP_21556392.1| 50S ribosomal protein L3P [Natrialba aegyptia DSM 13077]
 gi|445650379|gb|ELZ03303.1| 50S ribosomal protein L3P [Natrialba aegyptia DSM 13077]
          Length = 340

 Score =  164 bits (416), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 100/278 (35%), Positives = 144/278 (51%), Gaps = 8/278 (2%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLGF PRKRA+    +  ++P DD  +P  L  F GYKAGMTH+V   +K  S   
Sbjct: 7   PRKGSLGFGPRKRATSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDKANSPTE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VTI+ETPP+  V +  Y  TP G + L  VW      E+ R            
Sbjct: 65  GMEETVPVTIVETPPMRAVALRAYEDTPYGKKPLTEVWTDEFVPELDRVLDLPGDDYDTD 124

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMK-KYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGFF 187
           A     + +  +    D++     +     ++ +KK  +ME +V GGSV  +VD+A    
Sbjct: 125 AAADELRGFLEEGRVDDVRVITHTVPGDIPSMPKKKPDVMETRVGGGSVEDRVDYALELL 184

Query: 188 EK---QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGA 242
           E    +  ++ VF+  E +D  GVTKGKG +G V RWGV +   K  R    R++  +G 
Sbjct: 185 EDGGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGP 244

Query: 243 WHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           W+P+RV  TV + GQ GYH RTE+NK++  +G  +  +
Sbjct: 245 WNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGADAT 282


>gi|448463230|ref|ZP_21598008.1| 50S ribosomal protein L3P [Halorubrum kocurii JCM 14978]
 gi|445817225|gb|EMA67101.1| 50S ribosomal protein L3P [Halorubrum kocurii JCM 14978]
          Length = 338

 Score =  164 bits (416), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 99/280 (35%), Positives = 148/280 (52%), Gaps = 14/280 (5%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLG+ PR RA R   +++++P DD   P  L  F GYKAGMTH+V   ++  S   
Sbjct: 7   PRKGSLGYGPRTRADREVPRIRSWPDDD-GAPA-LQGFAGYKAGMTHVVMVNDEANSPRE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             ET   VT++ETPP+  V +  Y +TP G + +  VWA   +EE+ R          + 
Sbjct: 65  GMETSVPVTVVETPPMYAVALRAYEQTPYGKKPVEEVWATEFHEELDRAL----DLPAED 120

Query: 129 AFTKYTKKYET--DDGK-KDIQAQLEKM-KKYCTVIRKKAHLMEIQVNGGSVAQKVDFAY 184
            F +   +     D+G   D++     +  +   V +KK  +ME +V GGS+ ++VDF  
Sbjct: 121 TFEEDADELRALLDEGAVDDVRVITHTVPSELANVPKKKPDVMETRVGGGSLEERVDFGL 180

Query: 185 GFFEKQIP--IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACI 240
               +        VF+  +  D+ G+TKGKG +G V RWGV +   K  R    R++  +
Sbjct: 181 DLVAEGGAHEFGDVFRAGQYTDVSGITKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNL 240

Query: 241 GAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           G W+P+RV  TV + GQ GYH RTE+NK++   G+    S
Sbjct: 241 GPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDFGEGDDAS 280


>gi|452206448|ref|YP_007486570.1| 50S ribosomal protein L3 [Natronomonas moolapensis 8.8.11]
 gi|452082548|emb|CCQ35806.1| 50S ribosomal protein L3 [Natronomonas moolapensis 8.8.11]
          Length = 336

 Score =  164 bits (416), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 93/272 (34%), Positives = 147/272 (54%), Gaps = 11/272 (4%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GS+GF PR RA+    +  ++P DD  +P  L  F GYKAGM+H+V   ++P S   
Sbjct: 7   PRKGSMGFSPRSRAASEVPRFNSWP-DDEGQPG-LQGFAGYKAGMSHVVTINDEPNSPRE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
            +E    VT++ETPP+  V V  Y  TP G R L  +W   ++E++ R         ++ 
Sbjct: 65  GQEETVPVTVVETPPMRAVAVRAYEDTPYGTRPLTELWTDEVHEDLGRALS---VPDEQS 121

Query: 129 AFTKYTKKYETDDGK-KDIQAQLEKMKK-YCTVIRKKAHLMEIQVNGGSVAQKVDFAYGF 186
              +   +   D G   D++     +     +V +K+  +ME +V GG++  +++FA+  
Sbjct: 122 GGAESQIREALDSGALADVRVITHTLPSGLSSVPKKEPDVMETRVGGGALGDRLEFAFDL 181

Query: 187 FEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGA 242
            +   +     VF+  +  D+ G+TKGKG +G V RWGV +   K  R    R++  +G 
Sbjct: 182 VDDGGEHAATDVFRAGQYADVAGITKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGP 241

Query: 243 WHPARVSFTVARAGQNGYHHRTEMNKKIYKLG 274
           W+P+RV  TV + GQ GYH RTE+NK++  LG
Sbjct: 242 WNPSRVRSTVPQQGQTGYHQRTELNKRLVDLG 273


>gi|336252440|ref|YP_004595547.1| 50S ribosomal protein L3 [Halopiger xanaduensis SH-6]
 gi|335336429|gb|AEH35668.1| ribosomal protein L3 [Halopiger xanaduensis SH-6]
          Length = 339

 Score =  164 bits (416), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 101/286 (35%), Positives = 147/286 (51%), Gaps = 31/286 (10%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLGF PRKRAS    +  ++P DD  +P  L  F GYKAGMTH+V   ++  S   
Sbjct: 7   PRKGSLGFGPRKRASSEVPRFNSWP-DDEGQPT-LQGFAGYKAGMTHVVMVDDQSNSPTE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VTI+ETPP+  V +  Y  T  G + +  VW      E+ R            
Sbjct: 65  GMEQTVPVTIVETPPMRAVALRAYEDTAYGKQPVTEVWTDEFVSELDR------------ 112

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMK-------------KYCTVIRKKAHLMEIQVNGGS 175
                   Y+ D  + +++  LE+ +             +  +V +KK  +ME +V GG+
Sbjct: 113 VLDLPGDDYDPDAAEDELRGLLEEGRVDDVRVITHTVPTEIPSVPKKKPDVMETRVGGGA 172

Query: 176 VAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 233
           V ++VDFA    E   +  ++ VF+  E +D  GVTKGKG +G V RWGV +   K  R 
Sbjct: 173 VEERVDFALELLEDGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHARQ 232

Query: 234 --LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAS 277
              R++  +G W+P+RV  TV + GQ GYH RTE+NK++  +G  +
Sbjct: 233 GWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGA 278


>gi|448362304|ref|ZP_21550915.1| 50S ribosomal protein L3P [Natrialba asiatica DSM 12278]
 gi|445648825|gb|ELZ01773.1| 50S ribosomal protein L3P [Natrialba asiatica DSM 12278]
          Length = 340

 Score =  164 bits (415), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 101/290 (34%), Positives = 146/290 (50%), Gaps = 32/290 (11%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLGF PRKRA+    +  ++P DD  +P  L  F GYKAGMTH+V   +K  S   
Sbjct: 7   PRKGSLGFGPRKRATSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDKANSPTE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VTI+ETPP+  V +  Y  TP G + L  VW      E+ R            
Sbjct: 65  GMEETVPVTIVETPPMRAVALRAYEDTPYGKKPLTEVWTDEFVPELDR------------ 112

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMK-------------KYCTVIRKKAHLMEIQVNGGS 175
                   Y+TD    +++  LE+ +                ++ +KK  +ME +V G S
Sbjct: 113 VLDLPGDDYDTDASADELRGFLEEGRVDDVRVITHTVPGDIPSMPKKKPDVMETRVGGSS 172

Query: 176 VAQKVDFAYGFFEK---QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR 232
           V  +VD+A    E    +  ++ +F+  E +D  GVTKGKG +G V RWGV +   K  R
Sbjct: 173 VEDRVDYALELLEDGGGEHVMNDMFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHAR 232

Query: 233 G--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
               R++  +G W+P+RV  TV + GQ GYH RTE+NK++  +G  +  +
Sbjct: 233 QGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGADAT 282


>gi|409731024|ref|ZP_11272574.1| 50S ribosomal protein L3P [Halococcus hamelinensis 100A6]
 gi|448724782|ref|ZP_21707287.1| 50S ribosomal protein L3P [Halococcus hamelinensis 100A6]
 gi|445784991|gb|EMA35787.1| 50S ribosomal protein L3P [Halococcus hamelinensis 100A6]
          Length = 336

 Score =  164 bits (415), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 97/277 (35%), Positives = 145/277 (52%), Gaps = 11/277 (3%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GS+G+ PRKRAS    +  ++P DD  +P  L  F GYKAGM+H+V   +   S   
Sbjct: 7   PRKGSMGYSPRKRASSEVARFGSWPDDD-GQPG-LQGFAGYKAGMSHVVMIDDAANSPRE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VT++ETPP+  V +  Y +TP GLR L   W    + ++ R       +S  +
Sbjct: 65  GMEQTVPVTVVETPPMRAVALRAYEQTPYGLRPLTETWTDEFHADLDRALDVPDGESDPE 124

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMK-KYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGFF 187
           AF +  +    D    +I+A    +      + +KK  +ME ++ GG V ++V+F     
Sbjct: 125 AFEEAVQ----DGDVSEIRAITHTVPGGMANIPKKKPDVMETRIGGGDVTERVEFGLDLI 180

Query: 188 E--KQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAW 243
               +  +  VF+  E +D  GVTKGKG +G V RWGV +   K  R    R++  +G W
Sbjct: 181 AGGGEHNMTEVFRPGEYMDAAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW 240

Query: 244 HPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           +P+RV  TV + GQ GYH RTE+NK++  +G     S
Sbjct: 241 NPSRVRSTVPQQGQMGYHQRTELNKRLVSVGDGDDAS 277


>gi|448441449|ref|ZP_21589112.1| 50S ribosomal protein L3P [Halorubrum saccharovorum DSM 1137]
 gi|445688858|gb|ELZ41105.1| 50S ribosomal protein L3P [Halorubrum saccharovorum DSM 1137]
          Length = 338

 Score =  164 bits (415), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 96/277 (34%), Positives = 145/277 (52%), Gaps = 8/277 (2%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLG+ PR RA R   +++++P DD   P  L  F GYKAGMTH+V   ++  S   
Sbjct: 7   PRKGSLGYGPRTRADREVPRIRSWPDDD-GAPA-LQGFAGYKAGMTHVVMVNDEANSPRE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VT++ETPP+  V +  Y +TP G + +  VWA   +EE+ R       +   +
Sbjct: 65  GMEESVPVTVVETPPMYAVALRAYEQTPYGKKPVEEVWATEFHEELDRALDLP-AEDTFE 123

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKM-KKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGFF 187
                 +    +D   D++     +  +   V +KK  +ME +V GGS+ ++VDF     
Sbjct: 124 EDADELRALLDEDAVDDVRVITHTVPSELSNVPKKKPDIMETRVGGGSLEERVDFGLDLV 183

Query: 188 EKQIP--IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAW 243
            +        VF+  +  D+ G+TKGKG +G V RWGV +   K  R    R++  +G W
Sbjct: 184 AEGGAHEFGDVFRAGQYTDVSGITKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW 243

Query: 244 HPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           +P+RV  TV + GQ GYH RTE+NK++   G+    S
Sbjct: 244 NPSRVRSTVPQQGQTGYHQRTELNKRLIDFGEGDDAS 280


>gi|448323163|ref|ZP_21512627.1| 50S ribosomal protein L3P [Natronococcus amylolyticus DSM 10524]
 gi|445600349|gb|ELY54362.1| 50S ribosomal protein L3P [Natronococcus amylolyticus DSM 10524]
          Length = 339

 Score =  164 bits (414), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 100/289 (34%), Positives = 145/289 (50%), Gaps = 31/289 (10%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLGF PR+RAS    +  ++P DD  +P  L  F GYKAGMTH+V   ++  S   
Sbjct: 7   PRKGSLGFGPRQRASSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDEANSPTE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VTI+ETPP+  V +  Y  TP G + +  VW      E+ R            
Sbjct: 65  GMEETVPVTIVETPPMRAVALRAYEDTPYGKKPITEVWTDEFVPELDR------------ 112

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMK-------------KYCTVIRKKAHLMEIQVNGGS 175
                   Y+ D  + +++  LE  +                +V +KK  +ME +V GGS
Sbjct: 113 VLDLPGDDYDADTAEDELRELLEDGRVDDVRVITHTVPSAVPSVPKKKPDVMETRVGGGS 172

Query: 176 VAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 233
           V ++VDFA        +  ++  F+  E +D  GVTKGKG +G V RWGV +   K  R 
Sbjct: 173 VDERVDFALELIADGGEHVMNDTFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHARQ 232

Query: 234 --LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
              R++  +G W+P+RV  TV + GQ GYH RTE+NK++  +G  +  +
Sbjct: 233 GWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGADAT 281


>gi|383625045|ref|ZP_09949451.1| 50S ribosomal protein L3P [Halobiforma lacisalsi AJ5]
 gi|448697501|ref|ZP_21698541.1| 50S ribosomal protein L3P [Halobiforma lacisalsi AJ5]
 gi|445781454|gb|EMA32310.1| 50S ribosomal protein L3P [Halobiforma lacisalsi AJ5]
          Length = 339

 Score =  164 bits (414), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 99/277 (35%), Positives = 144/277 (51%), Gaps = 7/277 (2%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLGF PRKRAS    +  ++P  D  +P  L  F GYKAGMTH+V   +K  S   
Sbjct: 7   PRKGSLGFGPRKRASSEVPRFNSWPDTD-GQPT-LQGFAGYKAGMTHVVMVDDKANSPTE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VTI+ETPP+  V +  Y  TP G+  +  VW      E+ R            
Sbjct: 65  GMEQTVPVTIVETPPMRAVALRAYEDTPYGMNPVTEVWTDEFAPELDRVLDLPGDDYDSD 124

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKM-KKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGFF 187
           A     +    +    D++A    +  +  +V +KK  +ME ++ GGSV ++VDF     
Sbjct: 125 AAADELRGLLENGRVDDVRAITHTVPSEVPSVPKKKPDVMETRIGGGSVDERVDFGLELL 184

Query: 188 EK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAW 243
               +  ++ VF+  E +D  GVTKGKG +G V RWGV +   K  R    R++  +G W
Sbjct: 185 GDGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW 244

Query: 244 HPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           +P+RV  TV + GQ GYH RTE+NK++  +G+ +  +
Sbjct: 245 NPSRVRSTVPQQGQTGYHQRTELNKRLVDMGEGADAT 281


>gi|448350181|ref|ZP_21539000.1| 50S ribosomal protein L3P [Natrialba taiwanensis DSM 12281]
 gi|445637688|gb|ELY90836.1| 50S ribosomal protein L3P [Natrialba taiwanensis DSM 12281]
          Length = 340

 Score =  164 bits (414), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 101/290 (34%), Positives = 145/290 (50%), Gaps = 32/290 (11%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLGF PRKRA+    +  ++P DD  +P  L  F GYKAGMTH+V   +K  S   
Sbjct: 7   PRKGSLGFGPRKRATSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDKANSPTE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VTI+ETPP+  V +  Y  TP G + L  VW      E+ R            
Sbjct: 65  GMEETVPVTIVETPPMRAVALRAYEDTPYGKKPLTEVWTDEFVPELDR------------ 112

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMK-------------KYCTVIRKKAHLMEIQVNGGS 175
                   Y+TD    +++  LE+ +                ++ +KK  +ME +V G S
Sbjct: 113 VLDLPGDDYDTDASADELRGFLEEGRVDDVRVITHTVPGDIPSMPKKKPDVMETRVGGSS 172

Query: 176 VAQKVDFAYGFFEK---QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR 232
           V  +VD+     E    +  ++ VF+  E +D  GVTKGKG +G V RWGV +   K  R
Sbjct: 173 VEDRVDYTLELLEDGGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHAR 232

Query: 233 G--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
               R++  +G W+P+RV  TV + GQ GYH RTE+NK++  +G  +  +
Sbjct: 233 QGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGADAT 282


>gi|448329359|ref|ZP_21518659.1| 50S ribosomal protein L3P [Natrinema versiforme JCM 10478]
 gi|445614098|gb|ELY67779.1| 50S ribosomal protein L3P [Natrinema versiforme JCM 10478]
          Length = 339

 Score =  164 bits (414), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 101/289 (34%), Positives = 147/289 (50%), Gaps = 31/289 (10%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLGF PRKRA+    +  ++P  D  +P  L  F GYKAGMTH+V   +K  S   
Sbjct: 7   PRKGSLGFGPRKRATSEVPRFNSWPDTD-GQPT-LQGFAGYKAGMTHVVMVDDKANSPTE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VTI+ETPP+  V +  Y  TP G++ +  VW      E+ R            
Sbjct: 65  GMEETVPVTIVETPPMRAVALRAYEDTPYGMKPITEVWTDEFVPELDR------------ 112

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMK-------------KYCTVIRKKAHLMEIQVNGGS 175
                   Y+TD  + +++  LE+ +                +V +KK  +ME +V GGS
Sbjct: 113 VLDLPGDDYDTDASEDELRGLLEEGRVDDVRVITHTVPGDVPSVPKKKPDVMETRVGGGS 172

Query: 176 VAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 233
           V  +V+FA        +  ++ VF+  E +D  GVTKGKG +G V RWGV +   K  R 
Sbjct: 173 VDDRVEFALETVADGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHARQ 232

Query: 234 --LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
              R++  +G W+P+RV  TV + GQ GYH RTE+NK++  +G  +  +
Sbjct: 233 GWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGADAT 281


>gi|448298465|ref|ZP_21488494.1| 50S ribosomal protein L3P [Natronorubrum tibetense GA33]
 gi|445591661|gb|ELY45862.1| 50S ribosomal protein L3P [Natronorubrum tibetense GA33]
          Length = 339

 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/277 (35%), Positives = 144/277 (51%), Gaps = 7/277 (2%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLGF PR+RA+    +  ++P DD  +P  L  F GYKAGMTH+V   +K  S   
Sbjct: 7   PRKGSLGFGPRQRATSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDKANSPTE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VTI+ETPP+  V +  Y  TP G++ +  VW      E+ R            
Sbjct: 65  GMEQTVPVTIVETPPMRAVALRAYEATPYGMKPVTEVWTDEFVTELDRVLDVPGDDYDAD 124

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMK-KYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGFF 187
           A     + Y  +    D++     +     ++ +KK  +ME +V GGSV  +VDFA    
Sbjct: 125 AAEDELRGYLEEGRVDDVRVITHTVPGSIPSMPKKKPDVMETRVGGGSVEDRVDFALETV 184

Query: 188 EK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAW 243
               +  ++ VF+  E +D  GVTKGKG +G V RWGV +   K  R    R++  +G W
Sbjct: 185 ADGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW 244

Query: 244 HPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           +P+RV  TV + GQ GYH RTE+NK++  +G  +  +
Sbjct: 245 NPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGADAT 281


>gi|40641603|emb|CAE54281.1| putative ribosomal protein [Triticum aestivum]
          Length = 98

 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 77/95 (81%), Positives = 86/95 (90%), Gaps = 3/95 (3%)

Query: 149 QLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGV 208
           Q+ KMK    + +KKAHLMEIQ+NGG++A KVD+ Y FFEK++PIDAVFQKDEMIDIIGV
Sbjct: 5   QIRKMK---GLKQKKAHLMEIQINGGTIADKVDYGYSFFEKEVPIDAVFQKDEMIDIIGV 61

Query: 209 TKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAW 243
           TKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAW
Sbjct: 62  TKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAW 96


>gi|448352597|ref|ZP_21541379.1| 50S ribosomal protein L3P [Natrialba hulunbeirensis JCM 10989]
 gi|445642159|gb|ELY95229.1| 50S ribosomal protein L3P [Natrialba hulunbeirensis JCM 10989]
          Length = 340

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/278 (35%), Positives = 145/278 (52%), Gaps = 8/278 (2%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLGF PR+RAS    +  ++P DD  +P  L  F GYKAGMTH+V   +K  S   
Sbjct: 7   PRKGSLGFGPRQRASSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDKSNSPTE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VTI+ETPP+  V +  Y  TP G + +  VW      E+ R            
Sbjct: 65  GMEETVPVTIVETPPMRAVALRAYEDTPYGKQPVTEVWTDEFVPELDRVLDLPGDDYDTD 124

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMK-KYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGFF 187
           A     +    +    D++     +     ++ +KK  +ME +V GGSV ++VD+A    
Sbjct: 125 AAADELRGLLEEGRVDDVRVITHTVPGDVPSMPKKKPDVMETRVGGGSVEERVDYALELV 184

Query: 188 EK---QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGA 242
           E+   +  ++ VF+  E +D  GVTKGKG +G V RWGV +   K  R    R++  +G 
Sbjct: 185 EEDGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGP 244

Query: 243 WHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           W+P+RV  TV + GQ GYH RTE+NK++  +G  +  +
Sbjct: 245 WNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGADAT 282


>gi|289579898|ref|YP_003478364.1| 50S ribosomal protein L3 [Natrialba magadii ATCC 43099]
 gi|448281138|ref|ZP_21472446.1| 50S ribosomal protein L3P [Natrialba magadii ATCC 43099]
 gi|448358804|ref|ZP_21547478.1| 50S ribosomal protein L3P [Natrialba chahannaoensis JCM 10990]
 gi|289529451|gb|ADD03802.1| ribosomal protein L3 [Natrialba magadii ATCC 43099]
 gi|445579462|gb|ELY33856.1| 50S ribosomal protein L3P [Natrialba magadii ATCC 43099]
 gi|445644484|gb|ELY97497.1| 50S ribosomal protein L3P [Natrialba chahannaoensis JCM 10990]
          Length = 340

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/278 (35%), Positives = 145/278 (52%), Gaps = 8/278 (2%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLGF PR+RAS    +  ++P DD  +P  L  F GYKAGMTH+V   +K  S   
Sbjct: 7   PRKGSLGFGPRQRASSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDKSNSPTE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VTI+ETPP+  V +  Y  TP G + +  VW      E+ R            
Sbjct: 65  GMEQTVPVTIVETPPMRAVALRAYEDTPYGKQPVTEVWTDEFVPELDRVLDLPGDDYDTD 124

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMK-KYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGFF 187
           A     +    +    D++     +     ++ +KK  +ME +V GGSV ++VD+A    
Sbjct: 125 AAADELRGLLEEGRVDDVRVITHTVPGDVPSMPKKKPDVMETRVGGGSVEERVDYALELV 184

Query: 188 EK---QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGA 242
           E+   +  ++ VF+  E +D  GVTKGKG +G V RWGV +   K  R    R++  +G 
Sbjct: 185 EEDGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGP 244

Query: 243 WHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           W+P+RV  TV + GQ GYH RTE+NK++  +G  +  +
Sbjct: 245 WNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGADAT 282


>gi|374325726|ref|YP_005083926.1| 50S ribosomal protein L3P [Pyrobaculum sp. 1860]
 gi|356640995|gb|AET31674.1| 50S ribosomal protein L3P [Pyrobaculum sp. 1860]
          Length = 338

 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/281 (37%), Positives = 149/281 (53%), Gaps = 12/281 (4%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   PR GS+G  PRKRA+    +V+ +P  +  +P  L  F  YKAGM H V   ++P 
Sbjct: 4   KINRPRRGSMGVYPRKRAADIVPRVRNWPDVNLGRPT-LLGFAAYKAGMVHAVVVDDRPT 62

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRG--LRSLCTVWAQHLNEEVRRRFYKNW 122
           S L+ KE   AVT+++ PPL V GV  Y   P     R++  VW+  L + + R      
Sbjct: 63  SPLYGKEVVRAVTVLDAPPLYVWGVRLYTLDPANGYRRAVAEVWSAELPKYLHRVL---- 118

Query: 123 CKSKKKAFTKYTKKYET-DDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNG-GSVAQKV 180
              +K    K  KK E   D   D++A +        + +K   L+EI V G  S+ +++
Sbjct: 119 TLPEKVDVEKQMKKLEEFRDVAVDVRALVAMQPHLSGIGKKTPELLEIPVGGVPSIDERI 178

Query: 181 DFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVA 238
            +A     K +    VF   +++D+I VTKGKGY+GVV R+GVT LPR  K  +G R+  
Sbjct: 179 KYAVSLLGKTVSPKDVFTAGQLVDVIAVTKGKGYQGVVKRFGVTILPRWHKHRKGHRRTG 238

Query: 239 CIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
            IG   PA + FT  R GQ G+H RTE NK++ K+G+   E
Sbjct: 239 TIGPQAPA-LMFTQPRPGQMGFHQRTEYNKRLLKIGENGAE 278


>gi|15920641|ref|NP_376310.1| 50S ribosomal protein L3P [Sulfolobus tokodaii str. 7]
 gi|42559677|sp|Q975I1.1|RL3_SULTO RecName: Full=50S ribosomal protein L3P
 gi|15621424|dbj|BAB65419.1| 50S ribosomal protein L3P [Sulfolobus tokodaii str. 7]
          Length = 343

 Score =  161 bits (408), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 101/290 (34%), Positives = 155/290 (53%), Gaps = 18/290 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           M HRK   PR GS G  PRKRAS      +++P    ++P +L  F+GYK GM+HI    
Sbjct: 1   MGHRKLASPRRGSAGVRPRKRASEILPTPRSWPTIQSNEP-KLLGFVGYKVGMSHIFMID 59

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           +KP S  + KE    V++IETPP++ + +  YV  P+G  +  T +   ++E++ +   +
Sbjct: 60  DKPTSPNYGKEIYVPVSVIETPPVIPLAIRAYVMGPKGEPTTLTEYWGDISEDLLKLIQQ 119

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKM-----KKYCTVIRKKAHLMEIQVNGGS 175
                 K    K   K +  + K +    L  +     K   ++ +KK  ++E+QV GG 
Sbjct: 120 RKVTRLKIDKEKMKGKLDEINNKLNDILYLRVLIATQPKLVPSLGKKKPEIVEVQVGGGD 179

Query: 176 VAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRG 233
           +  ++++      K + +  VF++ ++IDIIGVTKGKG++GVV R+GV  LPR  K  +G
Sbjct: 180 IKSQLNYVLNILGKPLSVKDVFKEGQLIDIIGVTKGKGFQGVVKRYGVVELPRWHKHRKG 239

Query: 234 LRKVACIGAWHPARVSFT----VARAGQNGYHHRTEMNKKIYKLGKASQE 279
            RKV   G       SF+    V + GQ GYH RTE NK+I K+     E
Sbjct: 240 SRKVGARGP------SFSTPSYVPQPGQMGYHRRTEYNKRILKISDDPNE 283


>gi|379003041|ref|YP_005258713.1| 50S ribosomal protein L3 [Pyrobaculum oguniense TE7]
 gi|375158494|gb|AFA38106.1| archaeal ribosomal protein L3 [Pyrobaculum oguniense TE7]
          Length = 338

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 103/281 (36%), Positives = 149/281 (53%), Gaps = 12/281 (4%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   PR GS+G  PRKRA+    +V+ +P  +  KP  L  F  YKAGM H V   ++P 
Sbjct: 4   KINRPRRGSMGVYPRKRAADIVPRVRTWPDANLGKPA-LLGFAAYKAGMLHAVVVDDRPT 62

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRG--LRSLCTVWAQHLNEEVRRRFYKNW 122
           S L+ KE  +AVT+++ PPL V G   Y   P    LRS   VWA  L + + R      
Sbjct: 63  SPLYGKEVVKAVTVLDAPPLFVWGFRLYTLDPTNGYLRSAAEVWAGELPKHLSRVL---- 118

Query: 123 CKSKKKAFTKYTKKYET-DDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNG-GSVAQKV 180
              +K    K  K+ E   D   +++A +        + +K   L+EI + G  ++ +++
Sbjct: 119 TLPEKVDVDKQMKQVEEYRDVAVEVRALVATQPHLSGIGKKTPELLEIPIGGVPNIDERI 178

Query: 181 DFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVA 238
            FA     K +    VF   +++D+I VTKGKG++GVV R+GVT LPR  K  +G R+  
Sbjct: 179 KFATSLLGKTVSPKDVFSPGQLVDVIAVTKGKGWQGVVKRFGVTILPRWHKHRKGHRRTG 238

Query: 239 CIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
            IG   PA + FT  R GQ G+H RTE NK++ K+G+   E
Sbjct: 239 TIGPQAPA-LMFTQPRPGQMGFHQRTEYNKRLLKIGENGAE 278


>gi|448386089|ref|ZP_21564297.1| 50S ribosomal protein L3P [Haloterrigena thermotolerans DSM 11522]
 gi|445655987|gb|ELZ08829.1| 50S ribosomal protein L3P [Haloterrigena thermotolerans DSM 11522]
          Length = 339

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 100/289 (34%), Positives = 147/289 (50%), Gaps = 31/289 (10%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLGF PRKRA+    +  ++P  D  +P  L  F GYKAGMTH+V   +K  S   
Sbjct: 7   PRKGSLGFGPRKRATSEVPRFNSWPDTD-GQPT-LQGFAGYKAGMTHVVMVDDKANSPTE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VTI+ETPP+  V +  Y  TP G + +  VW      E+ R            
Sbjct: 65  GMEETVPVTIVETPPMRAVALRAYEDTPYGKKPITEVWTDEFVPELDR------------ 112

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMK-------------KYCTVIRKKAHLMEIQVNGGS 175
                   Y+ D  + +++  L + +             +  +V +KK  +ME +V GGS
Sbjct: 113 VLDIPGDDYDVDAAEDELRGLLSEGRVDDVRVITHTVPTEIPSVPKKKPDVMETRVGGGS 172

Query: 176 VAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 233
           V ++VDFA        +  ++ VF+  E +D  GVTKGKG +G V RWGV +   K  R 
Sbjct: 173 VEERVDFALETVADGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHARQ 232

Query: 234 --LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
              R++  +G W+P+RV  TV + GQ GYH RTE+NK++  +G+ +  +
Sbjct: 233 GWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGEGADAT 281


>gi|145592242|ref|YP_001154244.1| 50S ribosomal protein L3P [Pyrobaculum arsenaticum DSM 13514]
 gi|212288408|sp|A4WMH5.1|RL3_PYRAR RecName: Full=50S ribosomal protein L3P
 gi|145284010|gb|ABP51592.1| LSU ribosomal protein L3P [Pyrobaculum arsenaticum DSM 13514]
          Length = 338

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 103/281 (36%), Positives = 149/281 (53%), Gaps = 12/281 (4%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   PR GS+G  PRKRA+    +V+ +P  +  KP  L  F  YKAGM H V   ++P 
Sbjct: 4   KINRPRRGSMGVYPRKRAADIVPRVRTWPDVNLGKPA-LLGFAAYKAGMLHAVVVDDRPT 62

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRG--LRSLCTVWAQHLNEEVRRRFYKNW 122
           S L+ KE  +AVT+++ PPL V G   Y   P    LRS   VWA  L + + R      
Sbjct: 63  SPLYGKEVVKAVTVLDAPPLFVWGFRLYTLDPTNGYLRSAAEVWAGELPKHLSRVL---- 118

Query: 123 CKSKKKAFTKYTKKYET-DDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNG-GSVAQKV 180
              +K    K  K+ E   D   +++A +        + +K   L+EI + G  ++ +++
Sbjct: 119 TLPEKVDVDKQMKQVEEYRDVAVEVRALVATQPHLSGIGKKTPELLEIPIGGVPNIDERI 178

Query: 181 DFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVA 238
            FA     K +    VF   +++D+I VTKGKG++GVV R+GVT LPR  K  +G R+  
Sbjct: 179 KFAISLLGKTVSPKDVFSPGQLVDVIAVTKGKGWQGVVKRFGVTILPRWHKHRKGHRRTG 238

Query: 239 CIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
            IG   PA + FT  R GQ G+H RTE NK++ K+G+   E
Sbjct: 239 TIGPQAPA-LMFTQPRPGQMGFHQRTEYNKRLLKIGENGAE 278


>gi|332796528|ref|YP_004458028.1| 50S ribosomal protein L3 [Acidianus hospitalis W1]
 gi|332694263|gb|AEE93730.1| ribosomal protein L3 [Acidianus hospitalis W1]
          Length = 361

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 99/291 (34%), Positives = 160/291 (54%), Gaps = 16/291 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHI--VR 58
           + HRK   PR GS GF PRKRA       +++P+   S P  L  F+GYK GMTH+  + 
Sbjct: 23  LGHRKLASPRRGSSGFRPRKRAEELLPTPRSWPRISSSNPI-LLGFVGYKVGMTHVYYIN 81

Query: 59  DVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCT-VWAQHLNEEVRRR 117
           D++  GS  + KE    VT+IETPP++ + +  Y+   +G   + T  W   L +E+ R+
Sbjct: 82  DIK--GSSEYGKEVFTPVTVIETPPIIPIALRAYILGSKGEPEVLTDYWTPELPQEITRK 139

Query: 118 FYKNWCKSKKKAFTKYTKKYETD-DGKKDIQAQLEKMKKYCTVI-RKKAHLMEIQVNGGS 175
                 K  K    ++  K +++ +    ++A +    K    + +KK  ++EIQV GG 
Sbjct: 140 IKS--LKVNKDKLNEFLDKIKSNLNNILYLRAIIATQPKLVPALGKKKPEIVEIQVGGGD 197

Query: 176 VAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRG 233
            + ++++      K + +  +F++ +++DIIGVTKGKG++GV+ R+ V  LPR  K  +G
Sbjct: 198 TSAQLNYLLDILGKPVNVTDIFKEGQLVDIIGVTKGKGFQGVIKRYSVMELPRWHKHRKG 257

Query: 234 LRKVACIGAWHPARVSFT-VARAGQNGYHHRTEMNKKIYKLGKASQESHSA 283
            RKV   G   P+  + + V + GQ G+H RTE NK+I K+    QE + A
Sbjct: 258 SRKVGTKG---PSLGTPSYVPQPGQLGFHRRTEYNKRILKISTNPQEINPA 305


>gi|257387876|ref|YP_003177649.1| 50S ribosomal protein L3P [Halomicrobium mukohataei DSM 12286]
 gi|257170183|gb|ACV47942.1| ribosomal protein L3 [Halomicrobium mukohataei DSM 12286]
          Length = 338

 Score =  160 bits (406), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 96/277 (34%), Positives = 139/277 (50%), Gaps = 8/277 (2%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLG+ PR RA+    +  ++P DD      L  F GYKAGMTH+    ++P S   
Sbjct: 7   PRKGSLGYGPRTRAANETPRFNSWPSDDGQ--AGLQGFAGYKAGMTHVTLVNDEPNSPRE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VT++ETPP+  V V  Y  TP G R L  VW    + E+ R            
Sbjct: 65  GMEETVPVTVVETPPVRAVAVRAYEDTPYGKRPLTEVWTDEFHSELDRALDLPEGHDADA 124

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKM-KKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGFF 187
           A  +     +  D   D++     +  +   V +KK  +ME +V GGS++ + + A    
Sbjct: 125 AEEQVRDALDAGD-IADVRVVTHTVPDELANVPKKKPDVMETRVGGGSLSDRFEHALELV 183

Query: 188 EK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAW 243
           +   +  ++ VF+  E  DI  VTKGKG +G V RWGV +   K  R    R++  +G W
Sbjct: 184 DDGGEHAMNDVFRAGEYADIAAVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW 243

Query: 244 HPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           +P+RV  TV + GQ GYH RTE+NK++  +G     S
Sbjct: 244 NPSRVRSTVPQQGQTGYHQRTELNKRLIDIGDGDDAS 280


>gi|448475310|ref|ZP_21603028.1| 50S ribosomal protein L3P [Halorubrum aidingense JCM 13560]
 gi|445816781|gb|EMA66668.1| 50S ribosomal protein L3P [Halorubrum aidingense JCM 13560]
          Length = 338

 Score =  160 bits (406), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 98/289 (33%), Positives = 146/289 (50%), Gaps = 32/289 (11%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLG+ PR RA R   +++++P DD   P  L  F GYKAGMTH+V   ++  S   
Sbjct: 7   PRKGSLGYGPRTRADREVPRIRSWPDDD-GAPA-LQGFAGYKAGMTHVVMVNDEANSPRE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VT++ETPP+  V +  Y +TP G++ +  VWA   +EE+ R            
Sbjct: 65  GMEESVPVTVVETPPMYAVALRAYEQTPYGMKPVEEVWATEFHEELDRALD--------- 115

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKM-------------KKYCTVIRKKAHLMEIQVNGGS 175
                   +E D   ++++A L+                +   V +KK  +ME +V GGS
Sbjct: 116 --LPAEDTFEED--AEELRALLDDDVVDDVRVITHTVPSELANVPKKKPDVMETRVGGGS 171

Query: 176 VAQKVDFAYGFFEKQIP--IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 233
             ++VDF      +        VF+  +  D+ G+TKGKG +G V RWGV +   K  R 
Sbjct: 172 FEERVDFGLDLVAEGGAHEFGDVFRAGQYTDVSGITKGKGTQGPVKRWGVQKRKGKHARQ 231

Query: 234 --LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
              R++  +G W+P+RV  TV + GQ GYH RTE+NK++   G+    S
Sbjct: 232 GWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDFGEGDDAS 280


>gi|41615218|ref|NP_963716.1| 50S ribosomal protein L3P [Nanoarchaeum equitans Kin4-M]
 gi|42559579|sp|P60458.1|RL3_NANEQ RecName: Full=50S ribosomal protein L3P
 gi|40068942|gb|AAR39277.1| NEQ433 [Nanoarchaeum equitans Kin4-M]
          Length = 321

 Score =  160 bits (406), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 97/270 (35%), Positives = 153/270 (56%), Gaps = 20/270 (7%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GS+GF PRKRASR   ++K +PK +  KP    AF  YK GMTH + ++       +
Sbjct: 9   PRRGSMGFWPRKRASRIYPRIKTWPKIEEIKPL---AFAAYKVGMTHTILNI-------N 58

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRF--YKNW-CKS 125
            +     VT++E P L+V+G   Y K    L+ + +++   L + V R+    KN+  + 
Sbjct: 59  GERVFTPVTVLEAPELLVIGAKAYKKENGALKEISSLYFNDLPQYVFRKIPKLKNYNFEE 118

Query: 126 KKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYG 185
           KK+ F   +K    D+ K  +  Q  K+K     ++K   + +I + G  V +K+++A  
Sbjct: 119 KKEQFL--SKADNADEVKIIVSTQPWKIK-----LKKTPEIFDIPIGGSDVNKKLEYALS 171

Query: 186 FFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHP 245
              K++ I+ VF++ + +D+I VTKGKG++GV+ R+ V R   K+ +G+RKV  IG+  P
Sbjct: 172 LLGKELSINDVFKEGQYVDVIAVTKGKGFQGVIKRFHVHRRQHKSEKGVRKVGAIGSRGP 231

Query: 246 ARVSFTVARAGQNGYHHRTEMNKKIYKLGK 275
            R+  TV   GQ GYH RTE NK I K+G+
Sbjct: 232 GRIFPTVPMPGQMGYHRRTEYNKLIIKIGE 261


>gi|170516812|gb|ACB15214.1| ribosomal protein L3 [uncultured marine group II euryarchaeote
           DeepAnt-15E7]
          Length = 358

 Score =  160 bits (405), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 95/292 (32%), Positives = 154/292 (52%), Gaps = 34/292 (11%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GS+G+ PRKRA+R  G++ ++P+ D S   R+  F G+KAGMTH++     P S   
Sbjct: 7   PRRGSMGYSPRKRANRQYGRISSWPESD-SAEIRVQGFAGWKAGMTHLLVRDNNPNSSSA 65

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVW-----------AQHLNEEVRRR 117
           ++E  +AVT++E PP+ V+ V GY  TP G+++    W            +  N+    R
Sbjct: 66  QQEVRKAVTVVEAPPMSVLAVRGYRMTPYGMQTAGEAWFNSDSGPEGLSPRLANQSRGER 125

Query: 118 FYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKK--YC--------------TVIR 161
             +   K  K+A    ++      G+    A LE +++   C              +V  
Sbjct: 126 DAEEGRKPSKRAGRIPSR------GEGSPDAALEALREVDLCEVRLIVSTQPALVKSVSS 179

Query: 162 KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRW 221
           K   +ME+ + GG  A K+D+A       I +D V++  + ID++GVTKGKG++G + RW
Sbjct: 180 KTPEIMEVALAGGDNASKLDWAEERLGGAITLDDVYETGQEIDVVGVTKGKGWQGAIKRW 239

Query: 222 GVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKL 273
           G+  L  K  +  R+   +G +    V  T+ +AGQ GYH+RTE+NK+I ++
Sbjct: 240 GIKLLSHKNSKRRRQGGNMGDFGTGYVRKTIRQAGQVGYHNRTELNKRILRV 291


>gi|70606412|ref|YP_255282.1| 50S ribosomal protein L3P [Sulfolobus acidocaldarius DSM 639]
 gi|449066624|ref|YP_007433706.1| 50S ribosomal protein L3P [Sulfolobus acidocaldarius N8]
 gi|449068898|ref|YP_007435979.1| 50S ribosomal protein L3P [Sulfolobus acidocaldarius Ron12/I]
 gi|76363364|sp|Q4JB40.1|RL3_SULAC RecName: Full=50S ribosomal protein L3P
 gi|68567060|gb|AAY79989.1| 50S ribosomal protein L3P [Sulfolobus acidocaldarius DSM 639]
 gi|449035132|gb|AGE70558.1| 50S ribosomal protein L3P [Sulfolobus acidocaldarius N8]
 gi|449037406|gb|AGE72831.1| 50S ribosomal protein L3P [Sulfolobus acidocaldarius Ron12/I]
          Length = 342

 Score =  160 bits (405), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 106/298 (35%), Positives = 157/298 (52%), Gaps = 27/298 (9%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           M HRK   PR GS G  PRKRA       K +P  +  +P +L  F+GYKAGMTH+    
Sbjct: 1   MGHRKLSSPRRGSAGLRPRKRADEILPTPKNWPLVNLKEP-KLLGFIGYKAGMTHVYMID 59

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRG-LRSLCTVWAQHLNEEVRRRFY 119
           +KP S  + KE    VTI+E+PP++ + +  Y    +G L  L   WA    EE   ++ 
Sbjct: 60  DKPTSPNYGKEVYTPVTIVESPPILGLALRAYHIDSKGELSVLVDYWANF--EEGSLKYL 117

Query: 120 KNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVI-----------RKKAHLME 168
           K    S K   +K  +K +       IQ  L  +     ++           +K+  ++E
Sbjct: 118 KRKITSLKVDSSKMKEKLDL------IQKNLNNITYMRLLVSTQPWLVPSLGKKRPEIVE 171

Query: 169 IQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR 228
           IQ+ GGS+  ++++      KQIP+  VF++ ++ DIIGVTKGKG++GV+ R+ V   PR
Sbjct: 172 IQIGGGSIQDQLNYGLSLLGKQIPVRDVFREGQLTDIIGVTKGKGFQGVIKRYSVVEFPR 231

Query: 229 --KTHRGLRKVACIGAWHPARVSFT-VARAGQNGYHHRTEMNKKIYKLGKASQESHSA 283
             K  +G RK   IGA  P+  + + V + GQ G+H RTE NK+I K+G    E + A
Sbjct: 232 WHKHRKGSRK---IGARGPSISTPSYVPQPGQLGFHRRTEYNKRIIKIGDNVNEINPA 286


>gi|354610537|ref|ZP_09028493.1| ribosomal protein L3 [Halobacterium sp. DL1]
 gi|353195357|gb|EHB60859.1| ribosomal protein L3 [Halobacterium sp. DL1]
          Length = 324

 Score =  160 bits (405), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 95/270 (35%), Positives = 136/270 (50%), Gaps = 11/270 (4%)

Query: 14  LGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 73
           +GF PRKRA     +  ++P DD      L  F GYKAGMTH+V   +K  S     ET 
Sbjct: 1   MGFSPRKRAESEVPRFNSWPADDGQ--VGLQGFAGYKAGMTHVVLVDDKANSPSEGMETS 58

Query: 74  EAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKY 133
             VT++ETPP+    V  Y  TP G + L  VWA  ++E++ R              T+ 
Sbjct: 59  VPVTVVETPPMRAAAVRVYEDTPYGKKPLTEVWADDVHEDLDRALSVPQSGGDTDELTEM 118

Query: 134 TKKYETDDGKKDIQAQLEKMK-KYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGFFEKQI- 191
            +  +      DI+     +     ++ +K+  +ME +V GGS+ ++ DFA    E    
Sbjct: 119 LENEDV----ADIRVITHTVPGDLSSIPKKEPDIMETRVGGGSLQERADFAAELLEDGGV 174

Query: 192 -PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAWHPARV 248
                VF+  E  DI GVTKGKG +G V RWGV +   K  R    R++  +G W+P+RV
Sbjct: 175 HEFGDVFRAGEFTDIAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPSRV 234

Query: 249 SFTVARAGQNGYHHRTEMNKKIYKLGKASQ 278
             TV + GQ GYH RTE+NK++   G+   
Sbjct: 235 RSTVPQLGQTGYHQRTELNKRLIDFGEGDD 264


>gi|347524198|ref|YP_004781768.1| 50S ribosomal protein L3 [Pyrolobus fumarii 1A]
 gi|343461080|gb|AEM39516.1| ribosomal protein L3 [Pyrolobus fumarii 1A]
          Length = 346

 Score =  160 bits (405), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 109/298 (36%), Positives = 157/298 (52%), Gaps = 24/298 (8%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           M  RK   PR GSLG  PRKRASR   K++++P+    KP  L AFL YKAGMTH+    
Sbjct: 1   MGARKKHAPRRGSLGLRPRKRASRLIPKIRSWPEVKSEKPLPL-AFLAYKAGMTHVFMID 59

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPR-GLRSLCTVWA------QHLNEE 113
           ++PGS    KE    VTI+E PP+VV+ V  Y   P  GL +L   WA      Q  N +
Sbjct: 60  DRPGSTTEGKEIFVPVTILEAPPMVVLAVRVYGYDPNIGLYTLTEAWARPEDLVQQYNLD 119

Query: 114 VRRRFYKNW-CKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVN 172
           + R   K +     ++   K  +        + I A   ++    +  +KK  L+EI++ 
Sbjct: 120 IYRVLPKTFRVPDPEQQLKKIEELLPKVYDVRIIAATQPRLVGGLS--KKKPDLIEIKIG 177

Query: 173 GGS-VAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--K 229
           GGS + ++  +A     K   +  VFQ+ +++D+I VTKGKG++GV+ R+GV  LP+  K
Sbjct: 178 GGSGIEERFQYAASILGKTFTVRDVFQEGQLVDVIAVTKGKGFQGVIKRFGVKELPKWHK 237

Query: 230 THRGLRKVAC----IGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSA 283
             +G R++      IGA  P      V + GQ G+H RTE NK+I K+G    E   A
Sbjct: 238 HRKGSRRIGARSPGIGAISP------VPQPGQMGFHRRTEYNKRILKIGDNGWEVTPA 289


>gi|433590194|ref|YP_007279690.1| archaeal ribosomal protein L3 [Natrinema pellirubrum DSM 15624]
 gi|448332400|ref|ZP_21521644.1| 50S ribosomal protein L3P [Natrinema pellirubrum DSM 15624]
 gi|433304974|gb|AGB30786.1| archaeal ribosomal protein L3 [Natrinema pellirubrum DSM 15624]
 gi|445627504|gb|ELY80828.1| 50S ribosomal protein L3P [Natrinema pellirubrum DSM 15624]
          Length = 339

 Score =  160 bits (405), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 99/289 (34%), Positives = 147/289 (50%), Gaps = 31/289 (10%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLGF PRKRA+    +  ++P  D  +P  L  F GYKAGMTH+V   +K  S   
Sbjct: 7   PRKGSLGFGPRKRATSEVPRFNSWPDTD-GQPT-LQGFAGYKAGMTHVVMVDDKANSPTE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VTI+ETPP+  V +  Y  TP G + +  VW      E+ R            
Sbjct: 65  GMEETVPVTIVETPPMRAVALRAYEDTPYGKKPITEVWTDEFVPELDR------------ 112

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMK-------------KYCTVIRKKAHLMEIQVNGGS 175
                   Y+ D  + +++  L + +             +  +V +KK  +ME +V GGS
Sbjct: 113 VLDIPGDDYDVDAAEDELRGLLAEGRVDDVRVITHTVPTEIPSVPKKKPDVMETRVGGGS 172

Query: 176 VAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 233
           + ++VDFA        +  ++ VF+  E +D  GVTKGKG +G V RWGV +   K  R 
Sbjct: 173 IEERVDFALETVADGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHARQ 232

Query: 234 --LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
              R++  +G W+P+RV  TV + GQ GYH RTE+NK++  +G+ +  +
Sbjct: 233 GWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGEGADAT 281


>gi|170291100|ref|YP_001737916.1| 50S ribosomal protein L3P [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170175180|gb|ACB08233.1| ribosomal protein L3 [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 332

 Score =  160 bits (405), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 90/271 (33%), Positives = 146/271 (53%), Gaps = 9/271 (3%)

Query: 10  RHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHK 69
           RHGSL + PRKRA+  +   +++P+    KP  L AF GYK GM H++   ++PG     
Sbjct: 4   RHGSLQYYPRKRAATQKALFRSYPELSVDKPT-LVAFPGYKVGMVHVLLKEDRPGKLNLG 62

Query: 70  KETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKA 129
           ++   A T+IETPP+ +VG   Y +   GL+ L T       + + R        +  + 
Sbjct: 63  QQITLASTVIETPPIEIVGFRAYKEGYYGLKPLTTALRIEKKDPISRTL------TIGEG 116

Query: 130 FTKYTKKYETDDGKK--DIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGFF 187
              + +     +G K  +I+           + +KK   MEI V GG + ++++FA    
Sbjct: 117 VDNFNEALSKLEGAKVSEIRILSYTRPDLAGIHKKKPEFMEIPVKGGEMEERIEFAKSLV 176

Query: 188 EKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPAR 247
             Q+ +D+VF+  +++D+  VTKG G++GVV R+G+  L  K  +G  +V  +G+ HP  
Sbjct: 177 GSQLKVDSVFKVGQLVDVTAVTKGHGWQGVVRRFGIELLRHKAGKGRWRVGSLGSRHPPY 236

Query: 248 VSFTVARAGQNGYHHRTEMNKKIYKLGKASQ 278
           V++ V RAGQ GYH RTE NK+I  +G  ++
Sbjct: 237 VTWRVPRAGQTGYHKRTEYNKRILMMGDLTK 267


>gi|448730377|ref|ZP_21712685.1| 50S ribosomal protein L3P [Halococcus saccharolyticus DSM 5350]
 gi|445793545|gb|EMA44117.1| 50S ribosomal protein L3P [Halococcus saccharolyticus DSM 5350]
          Length = 337

 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/277 (35%), Positives = 145/277 (52%), Gaps = 11/277 (3%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLG+ PR+RAS    +  ++P+ D  +P  L  F GYKAGM+H+V   +   S   
Sbjct: 7   PRKGSLGYGPRQRASSEVPRFGSWPEAD-GQPG-LQGFAGYKAGMSHVVMIDDAANSPRE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VT++ETPP+  V +  Y  TP GLR L   W    + ++ R       ++   
Sbjct: 65  GMEQTVPVTVVETPPMRAVALRAYEDTPYGLRPLTETWTDEFHADLDRALDVPDGEADPD 124

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMK-KYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGFF 187
           AF +     E D G  DI+A    +  +   V +K+  +ME ++ GGS+  +V+F     
Sbjct: 125 AFREAIS--EADIG--DIRAITHTVPGEMANVPKKRPDVMETRIGGGSLDDRVEFGLELI 180

Query: 188 E--KQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAW 243
               +  +  VF+  E +D  GVTKGKG +G V RWGV +   K  R    R++  +G W
Sbjct: 181 TGGGEHNLTEVFRPGEYMDAAGVTKGKGTQGPVKRWGVQKRKGKHFRQGYRRRIGNLGPW 240

Query: 244 HPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           +P+RV  TV + GQ GYH RTE+NK++   G   + S
Sbjct: 241 NPSRVRSTVPQQGQTGYHQRTELNKRLVDAGDGDEPS 277


>gi|448737862|ref|ZP_21719895.1| 50S ribosomal protein L3P [Halococcus thailandensis JCM 13552]
 gi|445802824|gb|EMA53125.1| 50S ribosomal protein L3P [Halococcus thailandensis JCM 13552]
          Length = 336

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 95/277 (34%), Positives = 144/277 (51%), Gaps = 11/277 (3%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLG+ PR RA     +  ++P DD  +P  L  F GYKAGM+H+V   +   S   
Sbjct: 7   PRKGSLGYGPRTRAHSEVPRFGSWPDDD-GQPG-LQGFAGYKAGMSHVVMIDDAANSPRE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VT++ETPP+  V +  Y +TP GLR L   W    ++++ R       +S   
Sbjct: 65  GMEQTVPVTVVETPPMRAVALRAYEQTPYGLRPLTETWTDEFHDDLDRALDVPDGQSDPG 124

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMK-KYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGFF 187
           AF +  +  E      +I+A    +  +   V +K+  +ME +V+G  + ++V+F     
Sbjct: 125 AFEEAVENNEI----GEIRAITHTVPGEMANVPKKRPDVMETRVSGSDLDERVEFGLDLI 180

Query: 188 E--KQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAW 243
               +  +  VF+  E +D  GVTKGKG +G V RWGV +   K  R    R++  +G W
Sbjct: 181 AGGGEHELTEVFRPGEYMDAAGVTKGKGTQGPVKRWGVQKRKGKHFRQGYKRRIGNLGPW 240

Query: 244 HPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           +P+RV  TV + GQ GYH RTE+NK++  +G     S
Sbjct: 241 NPSRVRSTVPQQGQTGYHQRTELNKRLVSVGDGDDAS 277


>gi|399577346|ref|ZP_10771099.1| 50S ribosomal protein L3P [Halogranum salarium B-1]
 gi|399237729|gb|EJN58660.1| 50S ribosomal protein L3P [Halogranum salarium B-1]
          Length = 327

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/275 (35%), Positives = 144/275 (52%), Gaps = 14/275 (5%)

Query: 14  LGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 73
           +GF PRKRA+    +++++P DD   P  L  F GYKAGMTH+V   ++  S     E  
Sbjct: 1   MGFGPRKRAASEVPRIRSWP-DDEGSPA-LQGFAGYKAGMTHVVMVNDESNSPREGMEES 58

Query: 74  EAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKY 133
             VT++ETPP+  V +  Y  T  G + +  VW    +EE+ R          +  F + 
Sbjct: 59  VPVTVVETPPMRAVALRAYKDTAYGKKPVTEVWTTEFHEELDRTL----DLPAESTFDED 114

Query: 134 TKKYET--DDGKKDIQAQLEKM--KKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGFFEK 189
             +     DDGK D    +          V +KK  +ME +V GGS+ ++ D+A    E 
Sbjct: 115 ADELRALLDDGKVDDLRMITHTVPSALNNVPKKKPDVMETRVGGGSLDERADYALELVEA 174

Query: 190 --QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAWHP 245
             +  +D VF+  E +D+ GVTKGKG +G V RWGV +   K  R    R++  +G W+P
Sbjct: 175 GGEHSMDDVFRPGEYLDVSGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNP 234

Query: 246 ARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           +RV  TV + GQ GYH RTE+NK++  +G+    S
Sbjct: 235 SRVRSTVPQQGQMGYHQRTELNKRLIDVGEGDDAS 269


>gi|336477161|ref|YP_004616302.1| 50S ribosomal protein L3 [Methanosalsum zhilinae DSM 4017]
 gi|335930542|gb|AEH61083.1| ribosomal protein L3 [Methanosalsum zhilinae DSM 4017]
          Length = 337

 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/278 (34%), Positives = 136/278 (48%), Gaps = 6/278 (2%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   PR GSL F PRKRA  H  K +++P+   +   +L  F GYK GMTH++       
Sbjct: 3   KGHRPRRGSLAFSPRKRAKSHIAKFRSWPES--AGEPKLQDFAGYKVGMTHVIMIDNVKN 60

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
           S     E     TIIETP + V  +  Y +   G + +   WA  L+E + R        
Sbjct: 61  SLTEGTEISVPATIIETPAIRVAAIRAYAEDVYGKKPVYEAWASDLDESLSRNICLPKDY 120

Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVI-RKKAHLMEIQVNGGSVAQKVDFA 183
           S + A  K +   E  +   DI+     + K  T I +KK  LME  ++G  V  K ++A
Sbjct: 121 STQNALDKISGLIEEGNAT-DIRVATYTLPKNITGIPKKKPDLMETSISGNDVRAKFEYA 179

Query: 184 YGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIG 241
                 ++ I  +F    ++D+  +T GKG +G V RWG+     K  R   LR+V  +G
Sbjct: 180 SSILGNEVEISDIFDSGNLVDVASITTGKGTQGPVKRWGIQMAKHKHSRAGSLRQVGTLG 239

Query: 242 AWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
            W PA VS+ V + GQ GYH RTE NK+I K+   + E
Sbjct: 240 PWRPAHVSWRVPQMGQMGYHQRTEYNKRILKMSSDADE 277


>gi|448726794|ref|ZP_21709186.1| 50S ribosomal protein L3P [Halococcus morrhuae DSM 1307]
 gi|445793840|gb|EMA44411.1| 50S ribosomal protein L3P [Halococcus morrhuae DSM 1307]
          Length = 336

 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/277 (34%), Positives = 143/277 (51%), Gaps = 11/277 (3%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLG+ PR RA     +  ++P DD  +P  L  F GYKAGM+H+V   +   S   
Sbjct: 7   PRKGSLGYGPRTRAHSEVPRFGSWPDDD-GQPG-LQGFAGYKAGMSHVVMIDDAANSPRE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VT++ETPP+  V +  Y +TP GLR L   W    ++++ R       +S   
Sbjct: 65  GMEQTVPVTVVETPPMRAVALRAYEQTPYGLRPLTETWTDEFHDDLDRALDVPDGESDPG 124

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMK-KYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGFF 187
           AF +  +  E      +I+A    +  +   V +K+  +ME +V G  + ++V+F     
Sbjct: 125 AFEEAVENNEI----GEIRAITHTVPGEMANVPKKRPDVMETRVGGSDLDERVEFGLDLI 180

Query: 188 E--KQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAW 243
               +  +  VF+  E +D  GVTKGKG +G V RWGV +   K  R    R++  +G W
Sbjct: 181 AGGGEHELTEVFRPGEYMDAAGVTKGKGTQGPVKRWGVQKRKGKHFRQGYKRRIGNLGPW 240

Query: 244 HPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           +P+RV  TV + GQ GYH RTE+NK++  +G     S
Sbjct: 241 NPSRVRSTVPQQGQTGYHQRTELNKRLVSVGDGDDAS 277


>gi|444706378|gb|ELW47720.1| 60S ribosomal protein L3 [Tupaia chinensis]
          Length = 197

 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 78/151 (51%), Positives = 106/151 (70%), Gaps = 15/151 (9%)

Query: 82  PPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDD 141
           PP VV+G+VG+V+TPRGLR+  T+ A+ +++E +R FYKNW KSKK AFTKY K ++ D+
Sbjct: 2   PPTVVMGIVGHVETPRGLRTFRTLLAERISDECKRFFYKNWHKSKK-AFTKYCKNWQDDN 60

Query: 142 GKKDIQAQLEKMKKYCTVIR--------------KKAHLMEIQVNGGSVAQKVDFAYGFF 187
           GKK ++     MK YC VIR              KKAHLMEIQVNGG+VA+K+D+     
Sbjct: 61  GKKQVEKDFSSMKMYCQVIRIIAHTQMRLLPLCQKKAHLMEIQVNGGTVAEKLDWVLEQL 120

Query: 188 EKQIPIDAVFQKDEMIDIIGVTKGKGYEGVV 218
           E+++P++ VF +DEMID +GV KGKGY G +
Sbjct: 121 EQRVPVNQVFGQDEMIDAMGVIKGKGYRGTI 151


>gi|345005655|ref|YP_004808508.1| 50S ribosomal protein L3 [halophilic archaeon DL31]
 gi|344321281|gb|AEN06135.1| ribosomal protein L3 [halophilic archaeon DL31]
          Length = 338

 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/279 (34%), Positives = 145/279 (51%), Gaps = 12/279 (4%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLGF PR RA+    +++++P+D+ S P  L  F GYKAGMTH+V   ++  S   
Sbjct: 7   PRKGSLGFGPRTRAASEVPRIRSWPEDEGS-PA-LQGFAGYKAGMTHVVMVNDEEDSARE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRF---YKNWCKS 125
             E    VT++ETPP+  V V  Y  T  G +    VW    ++E+ R      +N  + 
Sbjct: 65  GMEESVPVTVVETPPIRAVAVRAYEDTAYGKKPAAEVWTGEFHDELDRALDLPEENDFEG 124

Query: 126 KKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYG 185
                    ++   DD +        ++     + +K+  +ME +V GGS+ ++VDFA  
Sbjct: 125 DADELRTLVEEGSVDDLRVITHTTPSEL---ANIPKKEPDVMETRVGGGSLQERVDFALD 181

Query: 186 FFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIG 241
             E   +     VF+  + +D  G+TKGKG +G V RWGV +   K  R    R++  +G
Sbjct: 182 LVEDGGEHEFGDVFRAGQYLDASGITKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLG 241

Query: 242 AWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
            W+P+RV  TV + GQ GYH RTE+NK++   G+    S
Sbjct: 242 PWNPSRVRSTVPQQGQTGYHQRTELNKRLIDFGEGDDAS 280


>gi|408404337|ref|YP_006862320.1| 50S ribosomal protein L3p [Candidatus Nitrososphaera gargensis
           Ga9.2]
 gi|300521620|gb|ADK26021.1| r-protein L3p [Candidatus Nitrososphaera gargensis]
 gi|408364933|gb|AFU58663.1| 50S ribosomal protein L3p [Candidatus Nitrososphaera gargensis
           Ga9.2]
          Length = 332

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 148/285 (51%), Gaps = 7/285 (2%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           M HRK+  PR GS+ F PR RA     +V+ +P+    K   L  F G+KAG  H++   
Sbjct: 1   MGHRKYSAPRRGSVAFRPRARARSLEARVRTWPQLAAEK-SSLLGFAGFKAGCIHVLTID 59

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++  +    K+     T+I TPP+ V+G+ GY K   G  ++  V+A+ L +E+ R+F  
Sbjct: 60  DREKTPNFGKQLLNPATVIVTPPIRVIGIRGYKKDIYGQHAIFDVYAKDLPKELSRKF-- 117

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKV 180
              KS  +AF K      +      I A +        + +K   + E+ V+G     + 
Sbjct: 118 -DAKSSDEAFAKAEGMLGSASA---IMAIVAVSPNSIGLSQKTPFVFEMAVSGKDAKSQY 173

Query: 181 DFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACI 240
           D+      +++ +  +FQ  + ID+ G+T+GKG EG VTR+G+ R   K+ + +R V  +
Sbjct: 174 DYVKSVLGREVKVSDIFQVGQNIDVFGITRGKGIEGPVTRFGIKRKQHKSRKSVRAVGTL 233

Query: 241 GAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 285
           G   PA V +TVAR GQ G+H RTE NK+I  +    ++  +++ 
Sbjct: 234 GPISPAVVMYTVARQGQRGFHQRTEYNKRILVMSNTEKDGQNSIN 278


>gi|126460189|ref|YP_001056467.1| 50S ribosomal protein L3P [Pyrobaculum calidifontis JCM 11548]
 gi|212288409|sp|A3MWI4.1|RL3_PYRCJ RecName: Full=50S ribosomal protein L3P
 gi|126249910|gb|ABO09001.1| LSU ribosomal protein L3P [Pyrobaculum calidifontis JCM 11548]
          Length = 338

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/283 (36%), Positives = 150/283 (53%), Gaps = 16/283 (5%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   PR GS+G  PRKRA+    +V+ +P+ +  KP  L  F  YKAGM H V   ++P 
Sbjct: 4   KINRPRRGSMGVYPRKRAADIVPRVRTWPEVNLGKPT-LLGFAAYKAGMLHAVVVDDRPT 62

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTP-RGLR-SLCTVWAQHLNEEVRRRFY--- 119
           S L+ KE  +AVT+++ PPL V  V  Y   P  G + ++   W      ++RR      
Sbjct: 63  SPLYGKEVVKAVTVLDAPPLYVAAVRLYTLDPTNGYKVAVGEAWVSEPPADLRRVLTLPE 122

Query: 120 KNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNG-GSVAQ 178
           K   + + KA  +Y       D   D++  +    +   + +K   ++EI V G  S+ +
Sbjct: 123 KFDTEKQLKALEEYR------DVAVDVRVLVATQPRLSGIGKKTPEVLEIPVGGVPSIDE 176

Query: 179 KVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRK 236
           +++FA     K +    VF   +++D+I VTKGKGY+GVV R+GVT LPR  K  +G R+
Sbjct: 177 RINFAISLLGKTVSPKDVFTPGQLVDVIAVTKGKGYQGVVKRFGVTILPRWHKHRKGHRR 236

Query: 237 VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
              IG   PA + FT  R GQ G+H RTE NK+I K+G    E
Sbjct: 237 TGTIGPQAPA-LMFTQPRPGQMGFHQRTEYNKRILKIGDNGAE 278


>gi|448735135|ref|ZP_21717352.1| 50S ribosomal protein L3P [Halococcus salifodinae DSM 8989]
 gi|445798748|gb|EMA49139.1| 50S ribosomal protein L3P [Halococcus salifodinae DSM 8989]
          Length = 337

 Score =  158 bits (400), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 97/277 (35%), Positives = 145/277 (52%), Gaps = 11/277 (3%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLG+ PR+RAS    +  ++P+ D  +P  L  F GYKAGM+H+V   +   S   
Sbjct: 7   PRKGSLGYGPRQRASSEVPRFGSWPEAD-GQPG-LQGFAGYKAGMSHVVMIDDAANSPRE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VT++ETPP+  V +  Y  TP GLR L   W    + ++ R       ++   
Sbjct: 65  GMEQTVPVTVVETPPMRAVALRAYEDTPYGLRPLTETWTDEFHADLDRALDVPDGEADPD 124

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMK-KYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGFF 187
           AF +     E D G  D++A    +  +   + +KK  +ME ++ GGS+  +V+F     
Sbjct: 125 AFREAIS--EADIG--DVRAITHTVPGEMVNIPKKKPDVMETRIGGGSLDDRVEFGLELI 180

Query: 188 E--KQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAW 243
               +  +  VF+  E +D  GVTKGKG +G V RWGV +   K  R    R++  +G W
Sbjct: 181 TGGGEHNLTEVFRPGEYMDAAGVTKGKGTQGPVKRWGVQKRKGKHFRQGYKRRIGNLGPW 240

Query: 244 HPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           +P+RV  TV + GQ GYH RTE+NK++   G   + S
Sbjct: 241 NPSRVRSTVPQQGQTGYHQRTELNKRLVDSGDGDEPS 277


>gi|77024938|gb|ABA61365.1| ribosomal protein L3 [uncultured marine group II euryarchaeote
           HF70_59C08]
          Length = 338

 Score =  158 bits (399), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 96/269 (35%), Positives = 152/269 (56%), Gaps = 8/269 (2%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           P+ GS+GF PRKRA+R  G+VK++P+ D S   R+  F G+KAGMTH++     PGS   
Sbjct: 7   PKKGSMGFGPRKRANRPYGRVKSWPETD-SDEVRVQGFAGWKAGMTHVMMRDLNPGSPSA 65

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWA--QHLNEEVRRRFYKNWCKSK 126
             E  +AVT++E PP+ V+ V GY  TP G ++    WA    L++ +     +   + +
Sbjct: 66  GAEVRKAVTVVEVPPMRVLAVRGYKMTPYGKQTAGEAWASADKLSDVIPSLPRRIPERKE 125

Query: 127 KKAFTKYTKKYETD--DGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAY 184
             A     K  E+D  + +  + +Q +K+     V  K   +ME+ + GG +  ++D+A 
Sbjct: 126 HDANAHLDKLRESDLAEVRLIVSSQPDKV---SAVGSKSPEIMEMGLTGGDLGAQLDWAA 182

Query: 185 GFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWH 244
               +++ I+ VF+    ID+IGVTKG G +GVV R+GV  L  K  +  R++  +G + 
Sbjct: 183 EKLGEELGIEDVFESGSDIDVIGVTKGYGNQGVVRRFGVKLLSHKNSKRRRQIGNMGDFG 242

Query: 245 PARVSFTVARAGQNGYHHRTEMNKKIYKL 273
              V  T+ +AGQ GYH RTE NK+I ++
Sbjct: 243 TGYVRKTIRQAGQTGYHQRTEYNKRILRI 271


>gi|379994229|gb|AFD22741.1| ribosomal protein L3, partial [Collodictyon triciliatum]
          Length = 209

 Score =  158 bits (399), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 74/124 (59%), Positives = 97/124 (78%), Gaps = 2/124 (1%)

Query: 178 QKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKV 237
           +KVDFA   FEK I +  VF ++E+ID + VTKG GY+GV++RWGVT+LPRKTH+GLRKV
Sbjct: 1   EKVDFALSLFEKPIAVGTVFAQNELIDTMAVTKGHGYKGVISRWGVTKLPRKTHKGLRKV 60

Query: 238 ACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRSVYLLSSL 297
           ACIGAWHPARV++TV RAGQ G+ HRTE NKKIY++G + ++  +A TE D +V  ++  
Sbjct: 61  ACIGAWHPARVAWTVPRAGQKGFFHRTETNKKIYRVG-SGEDKQNATTEADGTVKTITP- 118

Query: 298 MGSF 301
           MG F
Sbjct: 119 MGGF 122


>gi|315425680|dbj|BAJ47337.1| large subunit ribosomal protein L3 [Candidatus Caldiarchaeum
           subterraneum]
 gi|315427562|dbj|BAJ49161.1| large subunit ribosomal protein L3 [Candidatus Caldiarchaeum
           subterraneum]
 gi|343484512|dbj|BAJ50166.1| large subunit ribosomal protein L3 [Candidatus Caldiarchaeum
           subterraneum]
          Length = 320

 Score =  158 bits (399), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 102/306 (33%), Positives = 160/306 (52%), Gaps = 19/306 (6%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           M  RK+  PRHGSL +LPR RA+    +VK +P  +      +  F+GYK GMT +    
Sbjct: 1   MGRRKYSRPRHGSLAYLPRGRAASILPRVKHWPDGE-----GVLGFIGYKVGMTMVHYID 55

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
             P S     E  +A T++  PPL V+G+  Y      L ++   W++ + E+V+RR   
Sbjct: 56  NTPNSPTQGSEVAKACTVVAAPPLKVIGISLYRNVDGELVNIGKYWSKEVPEDVKRR--- 112

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKV 180
                  +      +  + +D   +++  +    +      K   + EI++ GG  A+ +
Sbjct: 113 ---NPTFRPMPSAEEIGQLEDDVDEVRIVVATQPRLVGA-GKAPRIAEIKI-GGKPAEAL 167

Query: 181 DFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACI 240
           + A     K + +  VF++ + +D+I VTKGKG++GVV R+GV+ L RK+ +  R VA I
Sbjct: 168 EKAKQLVGKDLRVTDVFKEGQFVDVIAVTKGKGFQGVVKRYGVSILQRKSRKTRRGVAAI 227

Query: 241 GAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK--ASQESHSAMTEFD--RSVYLLSS 296
           G W+P  V +TV R+GQ GYH RTE NK+I ++G   AS    S    F   +S YL+  
Sbjct: 228 GPWNPHYVMYTVPRSGQMGYHRRTEFNKRILRIGDDPASINPKSGWHRFGLVKSDYLV-- 285

Query: 297 LMGSFS 302
           L GS +
Sbjct: 286 LEGSVA 291


>gi|315425735|dbj|BAJ47391.1| large subunit ribosomal protein L3, partial [Candidatus
           Caldiarchaeum subterraneum]
          Length = 289

 Score =  158 bits (399), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 92/274 (33%), Positives = 147/274 (53%), Gaps = 13/274 (4%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           M  RK+  PRHGSL +LPR RA+    +VK +P  +      +  F+GYK GMT +    
Sbjct: 1   MGRRKYSRPRHGSLAYLPRGRAASILPRVKHWPDGE-----GVLGFIGYKVGMTMVHYID 55

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
             P S     E  +A T++  PPL V+G+  Y      L ++   W++ + E+V+RR   
Sbjct: 56  NTPNSPTQGSEVAKACTVVAAPPLKVIGISLYRNVDGELVNIGKYWSKEVPEDVKRR--- 112

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKV 180
                  +      +  + +D   +++  +    +      K   + EI++ GG  A+ +
Sbjct: 113 ---NPTFRPMPSAEEIGQLEDDVDEVRIVVATQPRLVGA-GKAPRIAEIKI-GGKPAEAL 167

Query: 181 DFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACI 240
           + A     K + +  VF++ + +D+I VTKGKG++GVV R+GV+ L RK+ +  R VA I
Sbjct: 168 EKAKQLVGKDLRVTDVFKEGQFVDVIAVTKGKGFQGVVKRYGVSILQRKSRKTRRGVAAI 227

Query: 241 GAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLG 274
           G W+P  V +TV R+GQ GYH RTE NK+I ++G
Sbjct: 228 GPWNPHYVMYTVPRSGQMGYHRRTEFNKRILRIG 261


>gi|294496017|ref|YP_003542510.1| 50S ribosomal protein L3P [Methanohalophilus mahii DSM 5219]
 gi|292667016|gb|ADE36865.1| LSU ribosomal protein L3P [Methanohalophilus mahii DSM 5219]
          Length = 337

 Score =  158 bits (399), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 93/290 (32%), Positives = 146/290 (50%), Gaps = 30/290 (10%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSL F PRKRA  H  + +++P+ +  +P +L  F GYK GMTH++   +   S   
Sbjct: 7   PRRGSLAFSPRKRAKSHIPRFRSWPEAE-GEP-KLQGFAGYKVGMTHVIMIDDAKNSLTE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VT+IETP + +  +  Y  TP G +++   W+ +L+ ++ RR           
Sbjct: 65  GAEIAVPVTVIETPQIGIAAIRAYKDTPYGEKTISEAWSANLDGDIGRRI---------- 114

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMK-------------KYCTVIRKKAHLMEIQVNGGS 175
              K  K Y T+   +++ + +E+ K                 + +KKA +ME  V+G  
Sbjct: 115 ---KTPKNYNTEKSLENMASLVEEGKVSEIRVITYTIPSSVSGIPKKKADIMETAVSGSD 171

Query: 176 VAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR--G 233
           V  K ++A      ++ I  +F +  +ID+  +T+G G EG V RWG+     K  R   
Sbjct: 172 VKAKFEYAKYILGSKVAISDIFSEGNIIDVAAITRGYGTEGPVKRWGIQLAKNKHSRQSS 231

Query: 234 LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSA 283
           LR+V  +G W+P  VS+ V + GQ GYH RTE NK+I K+     E + A
Sbjct: 232 LRQVGTLGPWNPPHVSWRVPQMGQAGYHQRTEYNKRILKVSSDVDEVNPA 281


>gi|257053359|ref|YP_003131192.1| 50S ribosomal protein L3P [Halorhabdus utahensis DSM 12940]
 gi|256692122|gb|ACV12459.1| ribosomal protein L3 [Halorhabdus utahensis DSM 12940]
          Length = 338

 Score =  157 bits (397), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 94/272 (34%), Positives = 144/272 (52%), Gaps = 10/272 (3%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLG+ PR RA+    +  ++P DD  +P  +  F GYKAGM+H+V   ++P S   
Sbjct: 7   PRKGSLGYGPRTRATSETPRFNSWP-DDEGQPG-VQGFAGYKAGMSHVVVINDEPNSPRE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VT++ETPP+  V +  Y  TP GLR L  VW    +E++ R    +    + +
Sbjct: 65  GMEETVPVTVVETPPMRAVALRAYEDTPYGLRPLTEVWTDEFHEDLDRAI--DLPAEQDR 122

Query: 129 AFTKYTKKYETDDGK-KDIQAQLEKMK-KYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGF 186
              +   +   D G+  D++     +     +V + K  +ME +V GGS+A +++     
Sbjct: 123 DGAEAQIRDALDAGRLGDVRLITHTVPGDLPSVPKNKPDVMETRVGGGSLADRLEHGLEL 182

Query: 187 FEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGA 242
                +  +  VF+  E  D+ GVTKGKG +G V RWGV +   K  R    R++  +G 
Sbjct: 183 VADGGEYAMTDVFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGP 242

Query: 243 WHPARVSFTVARAGQNGYHHRTEMNKKIYKLG 274
           W+P+RV  TV + GQ GYH RTE+NK++   G
Sbjct: 243 WNPSRVRSTVPQQGQTGYHQRTELNKRLIDFG 274


>gi|20089942|ref|NP_616017.1| 50S ribosomal protein L3P [Methanosarcina acetivorans C2A]
 gi|42559661|sp|Q8TRU7.1|RL3_METAC RecName: Full=50S ribosomal protein L3P
 gi|19914903|gb|AAM04497.1| ribosomal protein L3p [Methanosarcina acetivorans C2A]
          Length = 337

 Score =  157 bits (396), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 91/275 (33%), Positives = 148/275 (53%), Gaps = 8/275 (2%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           P+ GSL F PRKRA  H  + +A+P  + +   +L +F GYK GMTH++   +   S   
Sbjct: 7   PKRGSLAFSPRKRAKSHIPRFRAWP--EATGEPKLQSFAGYKVGMTHVIMVDDTKNSLTQ 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VT+IETP + V  +  Y +   G +++  VWA  L+ E++RR       ++ +
Sbjct: 65  GMEISVPVTVIETPAIRVAAIRAYAEDSTGEKAIAEVWAADLDPELKRRIPIPAAGNQAE 124

Query: 129 AFTKYTKKYETDDGK-KDIQAQLEKMKKYCTVIRKKA-HLMEIQVNGGSVAQKVDFAYGF 186
           A     K  E  +G+  D++A +  + K  T + KK   +ME  ++   +  K +++   
Sbjct: 125 ALENIGKLIE--EGRVSDVRAVIYTLPKSLTGVPKKVPDIMESGISARDLGTKFEYSKTI 182

Query: 187 FEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR--GLRKVACIGAWH 244
               + +  VF+   ++D   +T GKG +G V RWG+  +  K  R   LR+V  +GA++
Sbjct: 183 LGTLVSVTDVFKNGTLVDTAAITIGKGTQGPVKRWGIQLMKGKHSRQGSLRQVGTLGAFN 242

Query: 245 PARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
           P+RVS+ V + GQ GYH RTE NK+I K+G   +E
Sbjct: 243 PSRVSWRVPQMGQMGYHQRTEFNKRILKIGSDGEE 277


>gi|335437513|ref|ZP_08560289.1| 50S ribosomal protein L3P [Halorhabdus tiamatea SARL4B]
 gi|334895861|gb|EGM34024.1| 50S ribosomal protein L3P [Halorhabdus tiamatea SARL4B]
          Length = 338

 Score =  157 bits (396), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 94/272 (34%), Positives = 144/272 (52%), Gaps = 10/272 (3%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLG+ PR RA+    +  ++P DD  +P  +  F GYKAGM+H+V   ++P S   
Sbjct: 7   PRKGSLGYGPRTRATSETPRFNSWP-DDEGQPG-VQGFAGYKAGMSHVVVINDEPNSPRE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VT++ETPP+  V +  Y  TP GLR L  VW    +E++ R    +    + +
Sbjct: 65  GMEETVPVTVVETPPMRAVALRAYEDTPYGLRPLTEVWTDEFHEDLDRAI--DLPAEQDR 122

Query: 129 AFTKYTKKYETDDGK-KDIQAQLEKMK-KYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGF 186
              +   +   D G+  D++     +     +V + K  +ME +V GGS+A +++     
Sbjct: 123 DGAEAQIRDALDAGRLGDVRLITHTVPGDLPSVPKNKPDVMETRVGGGSLADRLEHGLEL 182

Query: 187 FEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGA 242
                +  +  VF+  E  D+ GVTKGKG +G V RWGV +   K  R    R++  +G 
Sbjct: 183 VADGGEYAMTDVFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGP 242

Query: 243 WHPARVSFTVARAGQNGYHHRTEMNKKIYKLG 274
           W+P+RV  TV + GQ GYH RTE+NK++   G
Sbjct: 243 WNPSRVRSTVPQQGQTGYHQRTELNKRLIDFG 274


>gi|193084205|gb|ACF09869.1| ribosomal protein L3 [uncultured marine group II euryarchaeote
           KM3-136-D10]
          Length = 342

 Score =  156 bits (395), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 92/279 (32%), Positives = 154/279 (55%), Gaps = 12/279 (4%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           P+ GS+ F PRKRA R  G+VK++P +   +  ++  F GYKAGM+H++   E PGS   
Sbjct: 7   PKRGSMAFGPRKRARRQTGRVKSWPSNGNGE-VKIQGFAGYKAGMSHVLIRDENPGSPSA 65

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWA--QHLNEE----VRRRFYKNW 122
            +E  +AVTI+ETPPL ++G+ GY +T  G ++    WA  + + E     VRR   +N 
Sbjct: 66  GQEIRKAVTIVETPPLQILGIRGYHQTYYGKQTAGEAWASGEEIAEAQPNLVRRVPARNT 125

Query: 123 CKSKK--KAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKV 180
             +++   A  +  +K +  + +  +  Q  K+K   T   K  ++ME+ +NG  +  ++
Sbjct: 126 HDTEEHITALKEMAEKGQLCEVRLIVSTQPSKVKSIPT---KTPNIMELGLNGSDITSRI 182

Query: 181 DFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACI 240
            +A     + + +  VF     +D+I VTKGKG++G + RWG+  L  K  +  R+   +
Sbjct: 183 AWAEERLGQTLKVSDVFSNGNDLDVIAVTKGKGWQGSIKRWGIKLLSHKNSKRRRQGGNM 242

Query: 241 GAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
           G +    V  T+ +AGQ GYH RTE NKK+ ++    ++
Sbjct: 243 GDFGTGYVRKTIRQAGQTGYHQRTEYNKKVIRISSPDED 281


>gi|154150075|ref|YP_001403693.1| 50S ribosomal protein L3P [Methanoregula boonei 6A8]
 gi|166233155|sp|A7I5N9.1|RL3_METB6 RecName: Full=50S ribosomal protein L3P
 gi|153998627|gb|ABS55050.1| ribosomal protein L3 [Methanoregula boonei 6A8]
          Length = 337

 Score =  156 bits (395), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 101/282 (35%), Positives = 142/282 (50%), Gaps = 14/282 (4%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   PR GSL F PRKRA     K K++P+   S    L  F GYK GMTH++   +   
Sbjct: 3   KINRPRRGSLAFSPRKRAQSPIPKYKSWPEH--SGAPALLGFAGYKVGMTHVLMVDDHKD 60

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
           S    KE    VTIIE P + V  +  Y K   G  +L  +WA+ L+ ++ RR       
Sbjct: 61  SPTEGKEIMVPVTIIEIPTMKVAALRVYTKDTYGKHALTEIWAEPLDSQLSRR-----VT 115

Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMK-----KYCTVIRKKAHLMEIQVNGGSVAQK 179
           S K   +   KK  +D     + A++  +          V +K   LMEI+V GG +A++
Sbjct: 116 SPKNYDSTAAKKKYSDALAAGLVAEIYALAYTQPATMSGVPKKVPDLMEIKVAGGDIAKQ 175

Query: 180 VDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKV 237
            ++A+G   K+I +  V +     DI  +T GKG +G V RWGVT   RK   G   R V
Sbjct: 176 YEYAFGLLGKEIRLSNVIETGAYADITAITIGKGTQGPVKRWGVTLRKRKHSVGGKERHV 235

Query: 238 ACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
             +G W+P  V + V ++GQ GY  RTE NK+I K+G+   E
Sbjct: 236 GTLGPWNPHHVRWEVPQSGQMGYQQRTEFNKRILKIGENGAE 277


>gi|159040903|ref|YP_001540155.1| 50S ribosomal protein L3P [Caldivirga maquilingensis IC-167]
 gi|212288253|sp|A8MB75.1|RL3_CALMQ RecName: Full=50S ribosomal protein L3P
 gi|157919738|gb|ABW01165.1| ribosomal protein L3 [Caldivirga maquilingensis IC-167]
          Length = 347

 Score =  156 bits (394), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/291 (35%), Positives = 153/291 (52%), Gaps = 29/291 (9%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   PR GS+ + PRKRAS    +++ +P  D  KP  L  F+GYKAGM H+    ++  
Sbjct: 4   KIHRPRRGSMAYYPRKRASDIVPRIRNWPVIDLGKPT-LLGFVGYKAGMVHVTVVDDRKT 62

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTP--RGLRSLCTVWAQHLNEEVRRRFYKNW 122
           S    KE  +AVT++ETPPL VVG+  Y   P    L S+   W  ++  EVR+   +  
Sbjct: 63  SPFFGKELVKAVTVVETPPLYVVGLRAYAINPLKAELVSVGEAWV-NIPNEVRKYIARR- 120

Query: 123 CKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVI-----------RKKAHLMEIQV 171
                       +K++TD    D+Q  L+ +  Y  VI           +K   ++EI V
Sbjct: 121 -------IPTLPEKFDTDKALADLQGLLDSV-SYIKVIAMTQPYKAGVGKKTPEVLEIPV 172

Query: 172 NG-GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR-- 228
            G  ++ ++  +A G   K++    VF+  +++D+IGVTKGKG +GV+ R+GV  LPR  
Sbjct: 173 GGVPTIDEQFKYASGLLGKEVKPTDVFKPGQLVDVIGVTKGKGTQGVIKRFGVKELPRWH 232

Query: 229 KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
           K  +G R+   +G   PA V +T  R GQ G+H RTE NK+I K+     E
Sbjct: 233 KHRKGSRRTGTVGP-KPA-VMYTQPRMGQMGFHRRTEYNKRILKISDNGSE 281


>gi|448503712|ref|ZP_21613341.1| 50S ribosomal protein L3P [Halorubrum coriense DSM 10284]
 gi|445691913|gb|ELZ44096.1| 50S ribosomal protein L3P [Halorubrum coriense DSM 10284]
          Length = 338

 Score =  156 bits (394), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/285 (33%), Positives = 145/285 (50%), Gaps = 24/285 (8%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLG+ PR RA     +++++P+DD   P  L  F GYKAGMTH++   ++  S   
Sbjct: 7   PRKGSLGYGPRTRAESEVPRIRSWPEDD-GAPA-LQGFAGYKAGMTHVMMVNDEANSPRE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VT++ETP +  V V  Y  TP G + +  VWA   +EE+ R            
Sbjct: 65  GMEEAVPVTVVETPQMYAVAVRAYENTPYGQKPVEEVWATEFHEELDRAL---------D 115

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCT---------VIRKKAHLMEIQVNGGSVAQK 179
              + T + + D+ +  +   +    +  T         V +KK  +ME +V GGS+ ++
Sbjct: 116 LPAEETFEADADELRALLDDDVVDDVRVITHTAPSDLSNVPKKKPDVMETRVGGGSLEER 175

Query: 180 VDFAYGFFEKQIP--IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LR 235
           VDFA     +        VF+  +  D+ G+TKGKG +G V RWGV +   K  R    R
Sbjct: 176 VDFALDLVAEGGAHEFGDVFRAGQYTDVSGITKGKGTQGPVKRWGVQKRKGKHARQGWRR 235

Query: 236 KVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           ++  +G W+P+RV  TV + GQ GYH RTE+NK++   G+    S
Sbjct: 236 RIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDFGEGDDAS 280


>gi|352682917|ref|YP_004893441.1| 50S ribosomal protein L3p [Thermoproteus tenax Kra 1]
 gi|350275716|emb|CCC82363.1| 50S ribosomal protein L3p [Thermoproteus tenax Kra 1]
          Length = 339

 Score =  154 bits (390), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 99/283 (34%), Positives = 149/283 (52%), Gaps = 15/283 (5%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   PR GS+G  PRKRAS    +V+ +P     KP  L  F  YK GM H V   +K  
Sbjct: 4   KIHRPRRGSMGVYPRKRASDIVPRVRTWPDPQLGKPS-LLGFAAYKVGMIHAVLVEDKQT 62

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTP-RGLR-SLCTVWAQHLNEEVRRRFYKNW 122
           S L  KE  +A T++E PPL ++ +  Y   P  G R S+  VW   +  +V R      
Sbjct: 63  SPLFGKEIVKAATVLEAPPLKILAIRLYSLDPTNGYRKSIGEVWTPEIPRDVARV----- 117

Query: 123 CKSKKKAFTKYTKKYETDDGKK---DIQAQLEKMKKYCTVIRKKAHLMEIQVNG-GSVAQ 178
            K+  K++    +    D  K    +++A +    +   + +K   L+EI + G  S+ +
Sbjct: 118 VKTLPKSYNLEDRLKLLDQLKPAAVEVRALVSTQPRLAGIGKKTPELLEIPIGGVASIDE 177

Query: 179 KVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRK 236
           ++ +      K++ I  VF + ++ID+IG+TKGKG++GV+ R+GVT LPR  K  +G R+
Sbjct: 178 RIKYGLEILGKEVKIADVFSEGKLIDVIGITKGKGWQGVIKRFGVTILPRWHKHRKGHRR 237

Query: 237 VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
              IG   PA + FT  R GQ G+H R+E NK+I K+G    E
Sbjct: 238 TGTIGPQSPA-LMFTQPRPGQMGFHQRSEYNKRILKIGSNPAE 279


>gi|193084317|gb|ACF09976.1| ribosomal protein L3 [uncultured marine group II euryarchaeote
           KM3-130-D10]
          Length = 358

 Score =  154 bits (390), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 94/307 (30%), Positives = 154/307 (50%), Gaps = 36/307 (11%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GS+G+ PRKRA R  G++ ++P  D S+  R+  F G+KAGMTH++     P S   
Sbjct: 7   PRRGSMGYSPRKRAIRQYGRISSWPDSDSSE-VRVQGFAGWKAGMTHVLVRDNNPHSPSA 65

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWA-------------------QH 109
           ++E  +AVT++E PP+ V+ + GY  TP G+++    WA                   +H
Sbjct: 66  RQEVRKAVTVVEAPPMCVLAIRGYRMTPYGMQTAGEAWADVDGGPDGLTPRFANQSRGEH 125

Query: 110 LNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQ-AQLEKMKKYCT--------VI 160
             +E R+        SK+            D   + +Q A L +++   +        V 
Sbjct: 126 DRDEGRK-------PSKRGGRIPSRNGNSPDAAMESLQNADLCEIRLIVSTQPALVKSVT 178

Query: 161 RKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTR 220
            K   +ME+ + GG  + K+++A       I +D V+Q  + ID++GVTKGKG++G + R
Sbjct: 179 SKTPEIMEVALVGGDNSSKMEWARERLGGTISLDDVYQTGQEIDVVGVTKGKGWQGSIKR 238

Query: 221 WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           WG+  L  K  +  R+   +G +    V  T+ +AGQ GYH RTE+NK+I ++    +  
Sbjct: 239 WGIKLLSHKNSKRRRQGGNMGDFGTRYVRKTIRQAGQVGYHQRTELNKRILRISNPEESD 298

Query: 281 HSAMTEF 287
            +    F
Sbjct: 299 ITPAGGF 305


>gi|229584895|ref|YP_002843397.1| 50S ribosomal protein L3P [Sulfolobus islandicus M.16.27]
 gi|259709736|sp|C3N5S7.1|RL3_SULIA RecName: Full=50S ribosomal protein L3P
 gi|228019945|gb|ACP55352.1| ribosomal protein L3 [Sulfolobus islandicus M.16.27]
          Length = 351

 Score =  154 bits (390), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 108/327 (33%), Positives = 172/327 (52%), Gaps = 36/327 (11%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           M HRK   PR GS G  PRKR+S      + +P+ +   P +L  F+GYK GM+H+    
Sbjct: 1   MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQINSPNP-KLLGFVGYKVGMSHVFMID 59

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCT-VWA----QHLNEEVR 115
           + P S  + KE    VT++E PP++ + +  Y    +G  ++ T  W+    Q L+   R
Sbjct: 60  DWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAVDGKGEPNVITEYWSPSSLQFLDITRR 119

Query: 116 RRFYKNWCK---SKKKAFTKYTKKYETDDGKKDIQAQLEKM-----------KKYCTVIR 161
            R + ++ K   SKKK   K+  K +       I++ L+++           +K  ++ +
Sbjct: 120 IRSFSSFLKNDESKKKFEEKFGSKLDL------IKSNLDRIVYFRLLVATQPRKIPSLGK 173

Query: 162 KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRW 221
           K   L+EIQ+ GG    ++D+A     K+I I  VF++ ++ID++GVTKGKG+ GV+ R+
Sbjct: 174 KVPDLVEIQIGGGEKKAQLDYALNVLGKEISIKDVFKEGQLIDVVGVTKGKGFAGVIKRY 233

Query: 222 GVTRLPR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
            V  LPR  K  +G RK+   G       S+T  + GQ G+H RTE NK+I K+G   +E
Sbjct: 234 SVVELPRWHKHRKGSRKIGTRGP-SLGTPSYT-PQPGQLGFHRRTEYNKRIIKIGDDPKE 291

Query: 280 SHSA----MTEFDRSVYLL--SSLMGS 300
            + A         R+ Y+L   S++GS
Sbjct: 292 INPAGGFVRYGIVRNTYILLEGSILGS 318


>gi|448489440|ref|ZP_21607663.1| 50S ribosomal protein L3P [Halorubrum californiensis DSM 19288]
 gi|445694812|gb|ELZ46930.1| 50S ribosomal protein L3P [Halorubrum californiensis DSM 19288]
          Length = 338

 Score =  154 bits (390), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 95/285 (33%), Positives = 144/285 (50%), Gaps = 24/285 (8%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLG+ PR RA     +++++P+DD   P  L  F GYKAGMTH++   ++  S   
Sbjct: 7   PRKGSLGYGPRTRADSEVPRIRSWPEDD-GAPA-LQGFAGYKAGMTHVMMVNDEANSPRE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VT++ETP +  V V  Y  TP G + +  VWA   +EE+ R            
Sbjct: 65  GMEEAVPVTVVETPQMYAVAVRAYENTPYGQKPVEEVWATEFHEELDRAL---------D 115

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCT---------VIRKKAHLMEIQVNGGSVAQK 179
              + T + + D+ +  +   +    +  T         V +KK  +ME +V GGS+ ++
Sbjct: 116 LPAEETFEEDADELRALLDDDVVDDVRVITHTAPSDLSNVPKKKPDVMETRVGGGSLEER 175

Query: 180 VDFAYGFFEKQIP--IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LR 235
            DFA     +        VF+  +  D+ G+TKGKG +G V RWGV +   K  R    R
Sbjct: 176 ADFALDLVAEGGAHEFGDVFRAGQYTDVSGITKGKGTQGPVKRWGVQKRKGKHARQGWRR 235

Query: 236 KVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           ++  +G W+P+RV  TV + GQ GYH RTE+NK++   G+    S
Sbjct: 236 RIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDFGEGDDAS 280


>gi|448436252|ref|ZP_21587053.1| 50S ribosomal protein L3P [Halorubrum tebenquichense DSM 14210]
 gi|448535708|ref|ZP_21622228.1| 50S ribosomal protein L3P [Halorubrum hochstenium ATCC 700873]
 gi|445682920|gb|ELZ35330.1| 50S ribosomal protein L3P [Halorubrum tebenquichense DSM 14210]
 gi|445703209|gb|ELZ55144.1| 50S ribosomal protein L3P [Halorubrum hochstenium ATCC 700873]
          Length = 338

 Score =  154 bits (389), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 95/289 (32%), Positives = 145/289 (50%), Gaps = 32/289 (11%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLG+ PR RA     +++++P+DD   P  L  F GYKAGMTH++   ++  S   
Sbjct: 7   PRKGSLGYGPRTRADSEVPRIRSWPEDD-GAPA-LQGFAGYKAGMTHVMMVNDEANSPRE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VT++ETP +  V V  Y +TP G + +  VW+   +EE+ R            
Sbjct: 65  GMEEAVPVTVVETPQMYAVAVRAYEETPYGQKPVAEVWSGEFHEELDRALD--------- 115

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKM-------------KKYCTVIRKKAHLMEIQVNGGS 175
                   +E D   ++++A L+                +   V +KK  +ME +V GGS
Sbjct: 116 --LPAEDTFEAD--AEELRALLDDDVVDDVRVITHTAPSELSNVPKKKPDVMETRVGGGS 171

Query: 176 VAQKVDFAYGFFEKQIP--IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 233
           + ++ DFA     +        VF+  +  D+ G+TKGKG +G V RWGV +   K  R 
Sbjct: 172 LEERADFALDLVAEGGAHEFGDVFRAGQYTDVSGITKGKGTQGPVKRWGVQKRKGKHARQ 231

Query: 234 --LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
              R++  +G W+P+RV  TV + GQ GYH RTE+NK++   G+    S
Sbjct: 232 GWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDFGEGDDAS 280


>gi|448426507|ref|ZP_21583356.1| 50S ribosomal protein L3P [Halorubrum terrestre JCM 10247]
 gi|448452123|ref|ZP_21593143.1| 50S ribosomal protein L3P [Halorubrum litoreum JCM 13561]
 gi|448484334|ref|ZP_21606041.1| 50S ribosomal protein L3P [Halorubrum arcis JCM 13916]
 gi|448508628|ref|ZP_21615579.1| 50S ribosomal protein L3P [Halorubrum distributum JCM 9100]
 gi|448517689|ref|ZP_21617263.1| 50S ribosomal protein L3P [Halorubrum distributum JCM 10118]
 gi|445679387|gb|ELZ31854.1| 50S ribosomal protein L3P [Halorubrum terrestre JCM 10247]
 gi|445697254|gb|ELZ49324.1| 50S ribosomal protein L3P [Halorubrum distributum JCM 9100]
 gi|445705904|gb|ELZ57792.1| 50S ribosomal protein L3P [Halorubrum distributum JCM 10118]
 gi|445809767|gb|EMA59805.1| 50S ribosomal protein L3P [Halorubrum litoreum JCM 13561]
 gi|445820109|gb|EMA69938.1| 50S ribosomal protein L3P [Halorubrum arcis JCM 13916]
          Length = 338

 Score =  154 bits (388), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 95/285 (33%), Positives = 143/285 (50%), Gaps = 24/285 (8%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLG+ PR RA     +++++P+DD   P  L  F GYKAGMTH++   ++  S   
Sbjct: 7   PRKGSLGYGPRTRADSEVPRIRSWPEDD-GAPA-LQGFAGYKAGMTHVMMVNDEANSPRE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VT++ETP +  V V  Y  TP G + +  VWA   +EE+ R            
Sbjct: 65  GMEEAVPVTVVETPQMYAVAVRAYENTPYGQKPVEEVWATEFHEELDRAL---------D 115

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCT---------VIRKKAHLMEIQVNGGSVAQK 179
              + T + + D+ +  +   +    +  T         V +KK  +ME +V GGS+ ++
Sbjct: 116 LPAEETFEEDADELRALLDDDVVDDVRVITHTAPSDLSNVPKKKPDVMETRVGGGSLEER 175

Query: 180 VDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LR 235
            DFA              VF+  +  D+ G+TKGKG +G V RWGV +   K  R    R
Sbjct: 176 ADFALDLVADGGAHEFGDVFRAGQYTDVSGITKGKGTQGPVKRWGVQKRKGKHARQGWRR 235

Query: 236 KVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           ++  +G W+P+RV  TV + GQ GYH RTE+NK++   G+    S
Sbjct: 236 RIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDFGEGDDAS 280


>gi|325969277|ref|YP_004245469.1| 50S ribosomal protein L3P [Vulcanisaeta moutnovskia 768-28]
 gi|323708480|gb|ADY01967.1| 50S ribosomal protein L3P [Vulcanisaeta moutnovskia 768-28]
          Length = 342

 Score =  153 bits (387), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 95/280 (33%), Positives = 147/280 (52%), Gaps = 9/280 (3%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   P+ GS+ + PRKRA     K + +P   P KP  L  F+ YKAGM H V   ++P 
Sbjct: 4   KIHRPKRGSMAYYPRKRAESLVAKFRVWPDPRPGKPM-LLGFVAYKAGMAHAVFIDDRPT 62

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTP-RGLR-SLCTVWAQHLNEEVRRRFYKNW 122
           S  + KE  + VTI+++PP+ V+    Y   P + L+ SL  VW   + +++ R+     
Sbjct: 63  SPFYSKEVIKPVTILDSPPIKVIAFKAYTYDPWKNLKLSLGEVWMPDVPKDIARKIPTLP 122

Query: 123 CKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNG-GSVAQKVD 181
            K  K+   K  K  +  D   +I+A +    +   + +K   L+EI + G   + Q + 
Sbjct: 123 EKFNKEEMMK--KILDNVDVITEIRALVATQPRLSGIGKKTPELLEIPIGGVDDINQLIK 180

Query: 182 FAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVAC 239
           +A     K I +  VF + + +D+  +TKGKG +GVV R+ V  LP+  K  +G R++  
Sbjct: 181 YADSILGKDINVTDVFNEGQYVDVAAITKGKGLQGVVKRFNVKILPKWHKHRKGYRRIGA 240

Query: 240 IGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
           IG  +PA ++FT  R GQ G H RTE NK+I K+G    E
Sbjct: 241 IGPQNPA-LAFTTPRPGQMGLHKRTEYNKRILKIGLNGAE 279


>gi|2425176|dbj|BAA22270.1| ribosomal protein L3 [Halobacterium salinarum]
          Length = 330

 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/276 (35%), Positives = 144/276 (52%), Gaps = 14/276 (5%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GS+GF PRKRA     +  ++P DD      L AF GYKAGMTH+V   +K  +   
Sbjct: 7   PRKGSMGFSPRKRAESEVPRFNSWPADDGE--VGLQAFAGYKAGMTHVVLVDDKANAPTE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             ET   VT+ ETPP+  V +  Y  TP G + L  VWA   +E + R          ++
Sbjct: 65  GMETTVPVTV-ETPPMRAVRL--YEDTPYGKKPLTEVWADDTHESLDRTL----SVPTRR 117

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMK-KYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGFF 187
              +  +  +T++   DI+     +   +  V +K   +ME +V GG++A +++FA    
Sbjct: 118 VTDELIEALDTEE-IADIRVITHTVPGDHAGVPKKNPDVMETRVGGGTLADRLEFAADLI 176

Query: 188 EKQI--PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL-RKVACIGAWH 244
           E         VF+  E  D  G+TKGKG +G V RWGV +   K  R + R++  +G W+
Sbjct: 177 EDGGVHAFGDVFRAGEFADAAGITKGKGTQGPVKRWGVQKRKGKHARHVARRIGNLGPWN 236

Query: 245 PARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           P+RV  TV + GQ GYH RTE+NK++  +    + S
Sbjct: 237 PSRVRSTVPQQGQTGYHQRTELNKRLIDINDGDEPS 272


>gi|375083294|ref|ZP_09730320.1| 50S ribosomal protein L3P [Thermococcus litoralis DSM 5473]
 gi|374742025|gb|EHR78437.1| 50S ribosomal protein L3P [Thermococcus litoralis DSM 5473]
          Length = 361

 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 150/299 (50%), Gaps = 41/299 (13%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   PR GSL + PRKRA     +++ +P++   +  R+  F GYKAGMTH++   + PG
Sbjct: 3   KISRPRRGSLAYSPRKRAKSIVPRIRKWPQE---QEVRMLGFAGYKAGMTHVLMIDDAPG 59

Query: 65  SKLHK-KETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWC 123
             L K KE    VTI+E PPL+V GV  Y +   GL +   V       E       N+ 
Sbjct: 60  --LTKGKEIFVPVTIVEAPPLIVYGVRAYKQGYLGLETATEVIVPDFKLE-------NYP 110

Query: 124 KSKKKAFTKY----------TKKYETDDGKKDIQAQLEKMKK---------------YCT 158
             K K  T Y           K Y  +  ++ +  +LE + K               +  
Sbjct: 111 SKKAKNVTFYKLLERRIKTLPKNYNEETFQQKL-GELEDLVKSGEIVEVRALVATQPWLA 169

Query: 159 VIRKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVV 218
            I+KK  +ME  V G SV +K  +      K++    V ++ E++DI+ VTKGKG +G V
Sbjct: 170 RIKKKPEVMEYAVGGTSVEEKFAYIKERLGKELRASEVLKEGELLDIVAVTKGKGTQGPV 229

Query: 219 TRWGVTRLPRKTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK 275
            RWG+     K  R    R V  +G WHPARV +TV +AGQ G+HHRTE NK++ ++G+
Sbjct: 230 KRWGIKIQFHKAQRAGKARHVGNLGPWHPARVMWTVPQAGQMGFHHRTEFNKRLLRIGE 288


>gi|298674802|ref|YP_003726552.1| 50S ribosomal protein L3 [Methanohalobium evestigatum Z-7303]
 gi|298287790|gb|ADI73756.1| ribosomal protein L3 [Methanohalobium evestigatum Z-7303]
          Length = 337

 Score =  152 bits (384), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/275 (33%), Positives = 139/275 (50%), Gaps = 8/275 (2%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           P  GSL + PRKRA  H  K +++P  D +   +L  F GYK GMTH++   +   S   
Sbjct: 7   PNRGSLAYSPRKRAKSHIPKFRSWPNLDGN--PKLQDFAGYKVGMTHVIMIDDTKNSVTE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E     T++ETP + V  +  Y  +  G + +   WA  L+ +V R+         +K
Sbjct: 65  GAEISVPATVVETPDIGVASIRAYKDSEYGKKPVAEAWATDLDADVLRKVKSPDNHDTEK 124

Query: 129 AFTKYTKKYETDDGK-KDIQAQLEKMKKYCT-VIRKKAHLMEIQVNGGSVAQKVDFAYGF 186
           +  K   +   DDG  KD++     +    T V +KK+ +ME  V+G  + +K ++A   
Sbjct: 125 SLEKM--ESLIDDGTVKDLRVVTYTLPSNLTGVPKKKSDIMETGVSGSDMKEKFEYAKSI 182

Query: 187 FEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAWH 244
              +I I  VF    ++DI  +T GKG +G V RWG+     K +R    R+V  +G WH
Sbjct: 183 LGTKISITDVFNPGGIVDIAAITTGKGTQGPVKRWGIQIAKHKHNRAGSARQVGTLGPWH 242

Query: 245 PARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
           PA +S+ V + GQ GYH RTE NK+I K+     E
Sbjct: 243 PAHISWRVPQMGQMGYHQRTEYNKRIIKVSNEGSE 277


>gi|15897623|ref|NP_342228.1| 50S ribosomal protein L3P [Sulfolobus solfataricus P2]
 gi|284174948|ref|ZP_06388917.1| 50S ribosomal protein L3P [Sulfolobus solfataricus 98/2]
 gi|384434237|ref|YP_005643595.1| 50S ribosomal protein L3 [Sulfolobus solfataricus 98/2]
 gi|9910845|sp|Q9UXA8.1|RL3_SULSO RecName: Full=50S ribosomal protein L3P
 gi|6015757|emb|CAB57584.1| ribosomal protein L3 (HMAL3) [Sulfolobus solfataricus P2]
 gi|13813888|gb|AAK41018.1| LSU ribosomal protein L3AB (rpl3AB) [Sulfolobus solfataricus P2]
 gi|261602391|gb|ACX91994.1| ribosomal protein L3 [Sulfolobus solfataricus 98/2]
          Length = 351

 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/327 (32%), Positives = 170/327 (51%), Gaps = 36/327 (11%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           M HRK   PR GS G  PRKR+S      + +P+ +   P +L  F+GYK GMTH+    
Sbjct: 1   MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQINSQNP-KLLGFVGYKVGMTHVFMID 59

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCT-VWA----QHLNEEVR 115
           + P S  + KE    VT++E PP++ + +  Y    +G  ++ T  W+    Q L+   R
Sbjct: 60  DWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAIDGKGEPNVITEYWSSSSLQFLDITRR 119

Query: 116 RRFYKNWCK---SKKKAFTKYTKKYETDDGKKDIQAQLEKM-----------KKYCTVIR 161
                ++ K   SKKK   ++  K +       I++ L+++           +K  ++ +
Sbjct: 120 IHSISSFLKDDESKKKFDERFNTKLDL------IKSNLDRIVYFRLLVSTQPRKIPSLGK 173

Query: 162 KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRW 221
           K   L+EIQ+ GG    ++D+A     K+I I  VF++ ++ID++GVTKGKG+ GV+ R+
Sbjct: 174 KAPDLVEIQIGGGEKKSQLDYALNILGKEITIRDVFKEGQLIDVVGVTKGKGFAGVIKRY 233

Query: 222 GVTRLPR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
            V  LPR  K  +G RK+   G       S+T  + GQ G+H RTE NK+I K+G   +E
Sbjct: 234 SVVELPRWHKHRKGSRKIGTRGP-SLGTPSYT-PQPGQLGFHRRTEYNKRIIKIGDEPKE 291

Query: 280 SHSA----MTEFDRSVYLL--SSLMGS 300
            + A         R+ Y+L   S++GS
Sbjct: 292 INPAGGFVRYGIVRNTYVLLEGSILGS 318


>gi|327311641|ref|YP_004338538.1| 50S ribosomal protein L3P [Thermoproteus uzoniensis 768-20]
 gi|326948120|gb|AEA13226.1| 50S ribosomal protein L3P [Thermoproteus uzoniensis 768-20]
          Length = 337

 Score =  151 bits (382), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/281 (34%), Positives = 146/281 (51%), Gaps = 11/281 (3%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   PR GS+G  PRKRAS    +V+ +P  +  KP  L  F  YK GM H V   ++  
Sbjct: 4   KINRPRRGSMGVYPRKRASDIVPRVRTWPDPNLGKPS-LLGFAAYKVGMLHAVVVEDRQT 62

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTP-RGLR-SLCTVWAQHLNEEVRRRFYKNW 122
           S L  KE  +A T++E PPL V+    Y   P  G R ++  VWA  + ++V R      
Sbjct: 63  SPLFGKEVVKAATVLEAPPLRVIAARLYTLDPTNGYRKAVGEVWAPEVPKDVYRAVK--- 119

Query: 123 CKSKKKAFTKYTKKYETDDGKK-DIQAQLEKMKKYCTVIRKKAHLMEIQVNG-GSVAQKV 180
              +K       K+ E   G   D++A +    +   + +K   ++EI + G  SV  ++
Sbjct: 120 TLPEKFDLEAELKRIEAVKGMAVDVRAIVATQPRLAGIGKKTPEILEIPIGGVPSVEDRL 179

Query: 181 DFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVA 238
            FA     K++ I  VF   +++D++ +T+GKG++GV+ R+GV  LPR  K  +G R+  
Sbjct: 180 KFALDMLGKEVRISDVFSAGQLVDVLAITRGKGWQGVIKRFGVKILPRWHKHRKGHRRTG 239

Query: 239 CIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
            IG   PA + FT  R GQ G+H RTE NK+I K+G    E
Sbjct: 240 TIGPQSPA-LMFTQPRPGQMGFHQRTEYNKRILKIGNNPAE 279


>gi|227827691|ref|YP_002829471.1| 50S ribosomal protein L3P [Sulfolobus islandicus M.14.25]
 gi|238619862|ref|YP_002914688.1| 50S ribosomal protein L3P [Sulfolobus islandicus M.16.4]
 gi|385773363|ref|YP_005645929.1| 50S ribosomal protein L3 [Sulfolobus islandicus HVE10/4]
 gi|385776001|ref|YP_005648569.1| 50S ribosomal protein L3 [Sulfolobus islandicus REY15A]
 gi|259709737|sp|C4KHF6.1|RL3_SULIK RecName: Full=50S ribosomal protein L3P
 gi|259709739|sp|C3MVH8.1|RL3_SULIM RecName: Full=50S ribosomal protein L3P
 gi|227459487|gb|ACP38173.1| ribosomal protein L3 [Sulfolobus islandicus M.14.25]
 gi|238380932|gb|ACR42020.1| ribosomal protein L3 [Sulfolobus islandicus M.16.4]
 gi|323474749|gb|ADX85355.1| ribosomal protein L3 [Sulfolobus islandicus REY15A]
 gi|323477477|gb|ADX82715.1| ribosomal protein L3 [Sulfolobus islandicus HVE10/4]
          Length = 351

 Score =  151 bits (382), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 107/327 (32%), Positives = 171/327 (52%), Gaps = 36/327 (11%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           M HRK   PR GS G  PRKR+S      + +P+ +   P +L  F+GYK GM+H+    
Sbjct: 1   MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQINSPNP-KLLGFVGYKVGMSHVFMID 59

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCT-VWA----QHLNEEVR 115
           + P S  + KE    VT++E PP++ + +  Y    +G  ++ T  W+    Q L+   R
Sbjct: 60  DWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAVDGKGEPNVITEYWSPSSLQFLDITRR 119

Query: 116 RRFYKNWCK---SKKKAFTKYTKKYETDDGKKDIQAQLEKM-----------KKYCTVIR 161
              + ++ K   SKKK   K+  K +       I++ L+++           +K  ++ +
Sbjct: 120 IHSFSSFLKNDESKKKFEEKFGSKLDL------IKSNLDRIVYFRLLVATQPRKIPSLGK 173

Query: 162 KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRW 221
           K   L+EIQ+ GG    ++D+A     K+I I  VF++ ++ID++GVTKGKG+ GV+ R+
Sbjct: 174 KVPDLVEIQIGGGEKKAQLDYALNVLGKEISIKDVFKEGQLIDVVGVTKGKGFAGVIKRY 233

Query: 222 GVTRLPR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
            V  LPR  K  +G RK+   G       S+T  + GQ G+H RTE NK+I K+G   +E
Sbjct: 234 SVVELPRWHKHRKGSRKIGTRGP-SLGTPSYT-PQPGQLGFHRRTEYNKRIIKIGDDPKE 291

Query: 280 SHSA----MTEFDRSVYLL--SSLMGS 300
            + A         R+ Y+L   S++GS
Sbjct: 292 INPAGGFVRYGIVRNTYILLEGSILGS 318


>gi|193083756|gb|ACF09443.1| ribosomal protein L3 [uncultured marine group II euryarchaeote
           SAT1000-15-B12]
          Length = 358

 Score =  151 bits (382), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 91/293 (31%), Positives = 151/293 (51%), Gaps = 36/293 (12%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GS+G+ PRKRA R  G++ ++P  D S+  R+  F G+KAGMTH++     P S   
Sbjct: 7   PRRGSMGYSPRKRAIRQYGRISSWPDSDSSE-VRVQGFAGWKAGMTHVLVRDNNPHSPSA 65

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWA-------------------QH 109
           ++E  +AVT++E PP+ V+ + GY  T  G+++    WA                   +H
Sbjct: 66  RQEVRKAVTVVEAPPMCVLAIRGYRMTSYGMQTAGEAWADADGGPDGLMPRFANQSQGEH 125

Query: 110 LNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQ-AQLEKMKKYCT--------VI 160
             +E R+        SK+            D   + +Q A L +++   +        V 
Sbjct: 126 DRDEGRK-------PSKRGGRIPSRNGNSPDAAMESLQNADLCEIRLIVSTQPALVKSVP 178

Query: 161 RKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTR 220
            K   +ME+ + GG  + K+++A      +I +D V+Q  + ID++G+TKGKG++G + R
Sbjct: 179 SKTPEIMEVALVGGDNSSKLEWAREKLGGEISLDDVYQTGQEIDVVGITKGKGWQGSIKR 238

Query: 221 WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKL 273
           WG+  L  K  +  R+   +G +    V  T+ +AGQ GYH RTE+NK+I ++
Sbjct: 239 WGIKLLSHKNSKRRRQGGNMGDFGTGYVRKTIRQAGQVGYHQRTELNKRILRI 291


>gi|227830387|ref|YP_002832167.1| 50S ribosomal protein L3P [Sulfolobus islandicus L.S.2.15]
 gi|229579206|ref|YP_002837604.1| 50S ribosomal protein L3P [Sulfolobus islandicus Y.G.57.14]
 gi|229582042|ref|YP_002840441.1| 50S ribosomal protein L3P [Sulfolobus islandicus Y.N.15.51]
 gi|284997894|ref|YP_003419661.1| 50S ribosomal protein L3 [Sulfolobus islandicus L.D.8.5]
 gi|259709738|sp|C3MQ59.1|RL3_SULIL RecName: Full=50S ribosomal protein L3P
 gi|259709740|sp|C3NHA9.1|RL3_SULIN RecName: Full=50S ribosomal protein L3P
 gi|259709741|sp|C3NEE3.1|RL3_SULIY RecName: Full=50S ribosomal protein L3P
 gi|227456835|gb|ACP35522.1| ribosomal protein L3 [Sulfolobus islandicus L.S.2.15]
 gi|228009920|gb|ACP45682.1| ribosomal protein L3 [Sulfolobus islandicus Y.G.57.14]
 gi|228012758|gb|ACP48519.1| ribosomal protein L3 [Sulfolobus islandicus Y.N.15.51]
 gi|284445789|gb|ADB87291.1| ribosomal protein L3 [Sulfolobus islandicus L.D.8.5]
          Length = 351

 Score =  151 bits (382), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 108/328 (32%), Positives = 172/328 (52%), Gaps = 38/328 (11%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           M HRK   PR GS G  PRKR+S      + +P+ +   P +L  F+GYK GM+H+    
Sbjct: 1   MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQINSPNP-KLLGFVGYKVGMSHVFMID 59

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCT-VWAQHLNE--EVRRR 117
           + P S  + KE    VT++E PP++ + +  Y    +G  ++ T  W+    +  ++ RR
Sbjct: 60  DWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAVDGKGEPNVITEYWSPSSLQFLDITRR 119

Query: 118 ------FYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKM-----------KKYCTVI 160
                 F KN  +SKKK   K+  K +       I++ L+++           +K  ++ 
Sbjct: 120 IHSLSSFLKN-DESKKKFEEKFGSKLDL------IKSNLDRIVYFRLLVATQPRKIPSLG 172

Query: 161 RKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTR 220
           +K   L+EIQ+ GG    ++D+A     K+I I  VF++ ++ID++GVTKGKG+ GV+ R
Sbjct: 173 KKVPDLVEIQIGGGEKKAQLDYALNVLGKEISIKDVFKEGQLIDVVGVTKGKGFAGVIKR 232

Query: 221 WGVTRLPR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ 278
           + V  LPR  K  +G RK+   G       S+T  + GQ G+H RTE NK+I K+G   +
Sbjct: 233 YSVVELPRWHKHRKGSRKIGTRGP-SLGTPSYT-PQPGQLGFHRRTEYNKRIIKIGDDPK 290

Query: 279 ESHSA----MTEFDRSVYLL--SSLMGS 300
           E + A         R+ Y+L   S++GS
Sbjct: 291 EINPAGGFVRYGIVRNTYILLEGSILGS 318


>gi|21228226|ref|NP_634148.1| 50S ribosomal protein L3P [Methanosarcina mazei Go1]
 gi|42559655|sp|Q8PV50.1|RL3_METMA RecName: Full=50S ribosomal protein L3P
 gi|20906682|gb|AAM31820.1| LSU ribosomal protein L3P [Methanosarcina mazei Go1]
          Length = 337

 Score =  151 bits (381), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 90/275 (32%), Positives = 144/275 (52%), Gaps = 8/275 (2%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           P+ GSL F PRKRA  H  + +A+P  + +   +L +F GYK GMTH++   +   S   
Sbjct: 7   PKRGSLAFSPRKRAKSHIPRFRAWP--EATGEPKLQSFAGYKVGMTHVIMVDDIKNSLTQ 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VT+IETP + V  V  Y +   G +++   WA  L+ E++RR       ++ +
Sbjct: 65  GMEISVPVTVIETPAIRVAAVRAYTEDSTGEKAIAEAWAADLDSELKRRIPIPAAGNQAE 124

Query: 129 AFTKYTKKYETDDGK-KDIQAQLEKMKKYCTVIRKKA-HLMEIQVNGGSVAQKVDFAYGF 186
                 K  E  +G+  DI+A    + K  T + KK   +ME  ++   +  K ++A   
Sbjct: 125 GLENIGKLIE--EGRVSDIRAVTYTLPKSLTGVPKKVPDIMESGISAKDLGAKFEYAKSI 182

Query: 187 FEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR--GLRKVACIGAWH 244
               + +  VF+   ++D   +T GKG +G V RWG+     K  R   LR++  +G+++
Sbjct: 183 LGNLVNVTDVFKNGTVVDTAAITIGKGTQGPVKRWGIQLQKGKHSRQGSLRQIGTLGSFN 242

Query: 245 PARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
           P+RVS+ V + GQ GYH RTE NK+I K+G   +E
Sbjct: 243 PSRVSWRVPQMGQMGYHQRTEFNKRILKIGSDGEE 277


>gi|126465913|ref|YP_001041022.1| 50S ribosomal protein L3P [Staphylothermus marinus F1]
 gi|212288413|sp|A3DNA4.1|RL3_STAMF RecName: Full=50S ribosomal protein L3P
 gi|126014736|gb|ABN70114.1| LSU ribosomal protein L3P [Staphylothermus marinus F1]
          Length = 395

 Score =  151 bits (381), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 105/337 (31%), Positives = 175/337 (51%), Gaps = 62/337 (18%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFP------------------KDDPSKPCR 42
           M HRK+  PRHGSLG  PRKRA++   +++++P                  K    KP  
Sbjct: 1   MGHRKYSAPRHGSLGVRPRKRAAKIVPRIRSWPTQSWFDLLVEKLGDEAVNKGIAPKPV- 59

Query: 43  LTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTP-RGLRS 101
           L  ++ YKAGM+H +   ++P +    KE    VT+++ PP++++G+ GY   P  GL S
Sbjct: 60  LLGYVAYKAGMSHAIIIDDRPHTFTSGKEIAIPVTVLDAPPILILGLRGYKIHPMHGLLS 119

Query: 102 LCTVW---AQHLNE-----------------EVRRRFYK-----NWCKSKKKAFTKYTKK 136
              VW    + L E                 ++ R++ K     N    K +  ++Y  K
Sbjct: 120 FGEVWRSPVEALKELYEKIYSDNPFINLGAKDIVRKYLKGLRKVNPGLVKPEPHSEYGFK 179

Query: 137 YETDDGKKDIQ----AQLEKMKKYCTVI-------RKKAHLMEIQVNGGSVAQKVDFAYG 185
           +  ++ K+ ++    A+L  ++   + I       +KK  ++EI++ GG++++++D+A  
Sbjct: 180 FLENNWKEKLERLKAAELADIRVIASTIPVLSGIGKKKPEIIEIKIGGGTLSERIDYAEK 239

Query: 186 FFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAW 243
                + +D VF++ + IDIIGVTKGKG++GV+ R+GV  LPR  K  +G RK   IG+ 
Sbjct: 240 LLGNYVTVDQVFREGQFIDIIGVTKGKGFQGVIKRFGVKELPRWHKHRKGSRK---IGSR 296

Query: 244 HPARVSFT-VARAGQNGYHHRTEMNKKIYKLGKASQE 279
            P   + +   + GQ G+H RTE NK+I K+G    E
Sbjct: 297 SPGFGTMSETPQPGQMGFHRRTEYNKRIIKIGINGWE 333


>gi|307595041|ref|YP_003901358.1| 50S ribosomal protein L3 [Vulcanisaeta distributa DSM 14429]
 gi|307550242|gb|ADN50307.1| ribosomal protein L3 [Vulcanisaeta distributa DSM 14429]
          Length = 342

 Score =  150 bits (380), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 93/280 (33%), Positives = 147/280 (52%), Gaps = 9/280 (3%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   P+ GS+ + PRKRA     + + +P   P KP  L  F  YKAGM H V   ++P 
Sbjct: 4   KIHRPKRGSMAYYPRKRAESLVARFRVWPDPHPGKPI-LLGFAAYKAGMAHAVVIDDRPT 62

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTP-RGLR-SLCTVWAQHLNEEVRRRFYKNW 122
           S  + KE  + VTI++ PP+ V+    Y   P + L+ SL  VW   + +++ R+     
Sbjct: 63  SPFYGKEVVKPVTILDAPPIKVIAFRAYTYDPWKNLKLSLGEVWMPDVPKDILRKIPVLP 122

Query: 123 CKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNG-GSVAQKVD 181
            K  K+   K  K  +  D   +++A +    +   + +K   ++EI + G   + Q + 
Sbjct: 123 EKFNKEEMMK--KILDNVDVITEVRAIVATQPRLSGIGKKTPEILEIPIGGVDDMNQIIK 180

Query: 182 FAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVAC 239
           FA     K I I+ VF + + +D+  +TKGKG++GVV R+ V  LP+  K  +G R++  
Sbjct: 181 FADSILGKDININDVFSEGQYVDVAAITKGKGWQGVVKRFNVKILPKWHKHRKGYRRIGA 240

Query: 240 IGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
           IG  +PA ++FT  R GQ G H RTE NK+I ++G    E
Sbjct: 241 IGPQNPA-LTFTTPRPGQMGLHKRTEYNKRILRIGMNGAE 279


>gi|398021160|ref|XP_003863743.1| ribosomal protein L3, putative, partial [Leishmania donovani]
 gi|322501976|emb|CBZ37060.1| ribosomal protein L3, putative, partial [Leishmania donovani]
          Length = 106

 Score =  150 bits (379), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 68/106 (64%), Positives = 89/106 (83%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSH KFEHPRHG LGFLPRKR+ + RG+ +AFPKDD ++   LT+F+ +KAGMTHIVRDV
Sbjct: 1   MSHCKFEHPRHGHLGFLPRKRSRQIRGRARAFPKDDATQKPHLTSFMVFKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVW 106
           ++PGSK++KKE  E VTI+E PP+V+VG+VGY +TP GL+++ TVW
Sbjct: 61  DRPGSKVNKKEVVEPVTILEAPPMVIVGIVGYRQTPVGLKTIGTVW 106


>gi|386001185|ref|YP_005919484.1| 50S ribosomal protein L3P [Methanosaeta harundinacea 6Ac]
 gi|357209241|gb|AET63861.1| 50S ribosomal protein L3P [Methanosaeta harundinacea 6Ac]
          Length = 297

 Score =  149 bits (377), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 85/234 (36%), Positives = 120/234 (51%), Gaps = 5/234 (2%)

Query: 43  LTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSL 102
           +  F GYKAGMTHI+   +KP S     E    VTI+ETPPL +  +  Y K   G+R+ 
Sbjct: 1   MDGFAGYKAGMTHIIMIDDKPNSLTEGMEISVPVTILETPPLSIAALRVYEKYNGGVRAA 60

Query: 103 CTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRK 162
              W+  L+  + R       K+K+ A          D  +  + A     K    V +K
Sbjct: 61  GEAWSDKLDPSLARSI--TVPKNKRGAAIDEIGAIIEDMEELRLIAHTNP-KLLTGVPKK 117

Query: 163 KAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWG 222
              LMEIQVNGG++A + + A       +PI ++F    +ID+  +TKGKG +G V RWG
Sbjct: 118 NPDLMEIQVNGGNIANQFELAKSLLGSSVPISSIFSPGSIIDVSAITKGKGVQGPVKRWG 177

Query: 223 VTRLPRKTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLG 274
           +    RK  RG   R +  +G W+P  V +TV   GQ GYH RTE NK++  +G
Sbjct: 178 INLQKRKHSRGGKRRHIGNLGPWNPHHVRWTVPLLGQMGYHQRTEFNKRVLAIG 231


>gi|91772083|ref|YP_564775.1| 50S ribosomal protein L3P [Methanococcoides burtonii DSM 6242]
 gi|121689445|sp|Q12ZV1.1|RL3_METBU RecName: Full=50S ribosomal protein L3P
 gi|91711098|gb|ABE51025.1| LSU ribosomal protein L3P [Methanococcoides burtonii DSM 6242]
          Length = 337

 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/285 (33%), Positives = 144/285 (50%), Gaps = 12/285 (4%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   PR GSL + PRKR+  H  + +++P+ D ++P +L  F GYK GMTH++   +   
Sbjct: 3   KGHRPRRGSLAYSPRKRSQSHIPRFRSWPESD-AEP-KLQGFAGYKVGMTHVIMIDDVKH 60

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
           S     E    VTIIETP + V  +  Y K   G  ++   W   L++++ RR       
Sbjct: 61  SLTEGTEISVPVTIIETPAIRVAAIRAYGKDTYGEIAIAEAWTDVLDKDLSRRL----KT 116

Query: 125 SKKKAFTKYTKKYET--DDGK-KDIQAQLEKMKKYCTVIRKKA-HLMEIQVNGGSVAQKV 180
           +K        +K ET  + G+  DI+     +    T + KK   +ME  V+G  V  K 
Sbjct: 117 AKNPDVNASLEKLETLVESGRANDIRLITYTLPSTLTGVPKKVPDVMETGVSGSDVKAKF 176

Query: 181 DFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR--GLRKVA 238
           ++A       + I  VF   +++D+  +T G G +G V RWG+  +  K  R   LR+V 
Sbjct: 177 EYAKTVLGTMVEISDVFDNGKIVDVAAITTGHGTQGPVKRWGINLMKNKHSRQGSLRQVG 236

Query: 239 CIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSA 283
            +G W PA VS+ V +AGQ GYH RT+ NK+I K+     E + A
Sbjct: 237 TLGPWTPAHVSWRVPQAGQMGYHQRTDYNKRILKMSSDVDEVNPA 281


>gi|307354323|ref|YP_003895374.1| 50S ribosomal protein L3 [Methanoplanus petrolearius DSM 11571]
 gi|307157556|gb|ADN36936.1| ribosomal protein L3 [Methanoplanus petrolearius DSM 11571]
          Length = 337

 Score =  149 bits (375), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/274 (32%), Positives = 140/274 (51%), Gaps = 6/274 (2%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSL + PRKRA     K  ++P  +  +P     + GYK GMTH++   +   S   
Sbjct: 7   PRRGSLAYSPRKRAKSQVPKYHSWPSYN-GEPA-FQGYAGYKVGMTHVIMIDDHKNSPSE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
            KE    VT+IE PP+ V+ +  Y     G ++   VW+++++E + R        + ++
Sbjct: 65  GKEISVPVTVIEIPPMKVIAIRAYTNDTYGRKAFAEVWSENIDESISRATQIPKKHNAEE 124

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKA-HLMEIQVNGGSVAQKVDFAYGFF 187
              K  K  E D    DI A +    +  T + KK   LMEI++ GG ++ ++DF     
Sbjct: 125 QKEKILKGIE-DGFVTDIFAIMYTQPEQLTGVPKKVPELMEIRIAGGDLSTRLDFGISKL 183

Query: 188 EKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRK--VACIGAWHP 245
            +++ I+ V    + ID+  VT GKG +G V RWG+    RK  RG +K  +  +G W P
Sbjct: 184 GEEVEIENVANAGQYIDVTAVTTGKGTQGAVKRWGIQVRKRKHSRGKKKRHIGNLGPWTP 243

Query: 246 ARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
             V + V + GQ GY  RTE NK+I ++G   +E
Sbjct: 244 HHVRWQVPQMGQMGYQQRTEFNKRILRIGNNPEE 277


>gi|219851107|ref|YP_002465539.1| 50S ribosomal protein L3P [Methanosphaerula palustris E1-9c]
 gi|254803682|sp|B8GKD3.1|RL3_METPE RecName: Full=50S ribosomal protein L3P
 gi|219545366|gb|ACL15816.1| ribosomal protein L3 [Methanosphaerula palustris E1-9c]
          Length = 337

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/270 (33%), Positives = 136/270 (50%), Gaps = 6/270 (2%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSL + PRKRA     K  ++P  D  +P  L +F GYK GMTH++   +   S   
Sbjct: 7   PRRGSLAYSPRKRAKSQVPKYHSWPARD-GEPI-LQSFAGYKVGMTHVIMVDDHKNSPTE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
            K+    VTIIE PP+ V  +  Y     G R+L  VW + L+  + RR       S++ 
Sbjct: 65  GKDIMVPVTIIEIPPMKVAAIRAYTADTYGKRALTEVWTEQLSTLLGRRITLPKKYSEEA 124

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKA-HLMEIQVNGGSVAQKVDFAYGFF 187
            F   ++         ++ A +       T + KK   LME+ + GG++ QKV+FA    
Sbjct: 125 GFKALSEAVAAGT-VTELHALMYTQPDTLTGVPKKVPELMEVCIGGGTLEQKVEFAQSII 183

Query: 188 EKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRK--VACIGAWHP 245
             ++ +  V    E  D+  +T GKG +G V RWG+    RK  RG +K  +  +G W+P
Sbjct: 184 GNEVNLADVIGAGEYADVTAITTGKGTQGPVKRWGIMLRKRKHSRGGKKRHIGNLGPWNP 243

Query: 246 ARVSFTVARAGQNGYHHRTEMNKKIYKLGK 275
             V + V + GQ GY  RT+ NK+I K+G+
Sbjct: 244 HHVRWQVPQMGQMGYQQRTDFNKRILKIGE 273


>gi|73667662|ref|YP_303677.1| 50S ribosomal protein L3P [Methanosarcina barkeri str. Fusaro]
 gi|109893521|sp|Q46G95.1|RL3_METBF RecName: Full=50S ribosomal protein L3P
 gi|72394824|gb|AAZ69097.1| LSU ribosomal protein L3P [Methanosarcina barkeri str. Fusaro]
          Length = 337

 Score =  148 bits (374), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 93/275 (33%), Positives = 139/275 (50%), Gaps = 8/275 (2%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           P+ GSL F PRKRA  H  + +A+P  + +   RL  F GYK GMTH++   +   S   
Sbjct: 7   PKRGSLAFSPRKRAKSHIPRFRAWP--EATGEPRLQGFAGYKVGMTHVIMVDDTKNSLTQ 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VTIIETP + V  +  Y +   G +++  VWA  L+ E++RR       +  +
Sbjct: 65  GMEISVPVTIIETPAIRVAAIRAYAEDTAGEKAIAEVWATDLDPELKRRIPVPKGDNMAE 124

Query: 129 AFTKYTKKYETDDGK-KDIQAQLEKMKKYCTVIRKKA-HLMEIQVNGGSVAQKVDFAYGF 186
                 K  E  +GK  DI+A    + K  T + KK   +ME  ++   +  K ++A   
Sbjct: 125 TLGNIGKMIE--EGKVSDIRAVTYTLPKSLTGVPKKTPDIMESGISARDLNTKFEYAKSI 182

Query: 187 FEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR--GLRKVACIGAWH 244
               + I  VF+   +ID   +T GKG +G   RWG+  +  K  R   LR++  +G + 
Sbjct: 183 LGTLVSITDVFKTGTLIDTAAITIGKGTQGPAKRWGIQLMKGKHSRQGSLRQIGTLGGFG 242

Query: 245 PARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
             RVS+ V + GQ GYH RTE NK+I K+G   +E
Sbjct: 243 LRRVSWRVPQMGQTGYHQRTEFNKRILKIGSDGEE 277


>gi|429216878|ref|YP_007174868.1| 50S ribosomal protein L3 [Caldisphaera lagunensis DSM 15908]
 gi|429133407|gb|AFZ70419.1| archaeal ribosomal protein L3 [Caldisphaera lagunensis DSM 15908]
          Length = 345

 Score =  148 bits (374), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/295 (33%), Positives = 154/295 (52%), Gaps = 41/295 (13%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           M HRK    R GSLGF PR+RA     ++K++P     +P +L  F+GYK GMTH+    
Sbjct: 1   MGHRKKSAARRGSLGFYPRQRAVEFVPRIKSWPTLSIQEP-KLLGFIGYKVGMTHVFIIE 59

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYV-KTPRGLRSLCTVWAQHLNE-EVRRRF 118
            + G   + KE    VTI+ETPP+ V+ V GY     +GL  L   W++  N+ E+ RR 
Sbjct: 60  NRQGLPTYGKEVMRPVTIVETPPVYVLAVRGYAFDLNKGLYPLTEAWSKIPNDLELERRI 119

Query: 119 YKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVI-----------RKKAHLM 167
                            +++T+   K++Q    ++K+   +I           +KK  ++
Sbjct: 120 -------------STLGEFDTEGSIKELQKSANELKEIRVLIASQPKLTGGLSKKKPDVI 166

Query: 168 EIQVNGGS--VAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 225
           E++VN  S  V + +DFA     +Q+ +  VFQ  ++ID++ V+KGKG++GV+ R G  +
Sbjct: 167 EVKVNAPSNDVKKALDFAINKLGQQVTVKDVFQPGQVIDVLAVSKGKGWQGVIKRAGAKQ 226

Query: 226 LPRKT-HR-GLRKVAC----IGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLG 274
           LPR T HR G RK+      +G W      +     GQ G+H RT+ NK+I  +G
Sbjct: 227 LPRWTKHRKGSRKIGARSHGLGTW------WENPSPGQLGFHRRTDYNKRILDIG 275


>gi|124484910|ref|YP_001029526.1| 50S ribosomal protein L3P [Methanocorpusculum labreanum Z]
 gi|212288407|sp|A2SPK3.1|RL3_METLZ RecName: Full=50S ribosomal protein L3P
 gi|124362451|gb|ABN06259.1| LSU ribosomal protein L3P [Methanocorpusculum labreanum Z]
          Length = 333

 Score =  148 bits (373), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/277 (34%), Positives = 141/277 (50%), Gaps = 7/277 (2%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSL + PRKRA     K +++P+ +  +P  L  F GYKAGMTH++   +   S   
Sbjct: 6   PRAGSLAYYPRKRAKGIVPKYQSWPEYN-GQPM-LQGFAGYKAGMTHVIMIDDHKKSPTE 63

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
            KE    VT+IE P + V  +  YVK   G   L  VWA++L E +  R  K    +  K
Sbjct: 64  GKEVMVPVTVIEIPAMTVAAIRVYVKDTYGKHPLTEVWAENL-EALSGRITKAKTNNAAK 122

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGFFE 188
           A  K        D  + +     K  +   V +K   LMEI+V GGS  ++ D+A     
Sbjct: 123 ATEKINA--AIGDVVEVMVLMYTKPTELTGVPKKVPDLMEIRVAGGSAQERFDYALSILG 180

Query: 189 KQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAWHPA 246
             + + ++  + +  DI G+TKGKG++G V R+G+T   RK  R    R +  +G W P 
Sbjct: 181 TDVDMKSLLSEGQFADITGITKGKGFQGAVKRFGITLRKRKHARTKKERHIGTLGPWTPH 240

Query: 247 RVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSA 283
            V + V   GQ G+  RTE NK+I K+G+ + E + A
Sbjct: 241 HVRWQVPMPGQMGFQQRTEFNKRIIKIGENADEINPA 277


>gi|147919334|ref|YP_686930.1| 50S ribosomal protein L3P [Methanocella arvoryzae MRE50]
 gi|121685298|sp|Q0W1Y9.1|RL3_UNCMA RecName: Full=50S ribosomal protein L3P
 gi|110622326|emb|CAJ37604.1| 50S ribosomal protein L3P [Methanocella arvoryzae MRE50]
          Length = 337

 Score =  148 bits (373), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/281 (34%), Positives = 145/281 (51%), Gaps = 20/281 (7%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPK--DDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSK 66
           PR GSLG+ PR RA   + K++ + +  D P    ++  F+G+KAGM+HIV   ++P S 
Sbjct: 7   PRRGSLGYSPRVRARSQKPKMRNWAELGDQP----KIQGFVGFKAGMSHIVMVDDRPHSA 62

Query: 67  LHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNE-EVRRRFYKNWCKS 125
               E    VTI+E P + V G+  Y  +P G + +   W   L   E      KN  K+
Sbjct: 63  TEGMEISVPVTIVEAPQMHVAGIRVYDDSPYGKKVIGEAWISDLKMLESLTHLPKNGYKT 122

Query: 126 KKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCT-----VIRKKAHLMEIQVNGGSVAQKV 180
            ++   K  +       KK + A L  M    T     + +K   LME ++ GG +A++ 
Sbjct: 123 DEQ-LAKIAELV-----KKGVVADLRVMTVTLTSEVSGIPKKVPELMENRIAGGDMAKRF 176

Query: 181 DFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRK--VA 238
           +FA     K + I  VF   E++D+  +TKG G +G V RWG+    RK  R  +K  V 
Sbjct: 177 EFAKSLMGKAVGIKDVFAPGELVDVSAITKGYGTQGPVVRWGIATQKRKHARTGKKRHVG 236

Query: 239 CIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
            +G W+P R+ + V + GQ GYH RTE NK+I K+G  ++E
Sbjct: 237 NLGPWNPHRIRWQVPQLGQTGYHQRTEYNKRILKMGDKAEE 277


>gi|389860647|ref|YP_006362887.1| 50S ribosomal protein L3P [Thermogladius cellulolyticus 1633]
 gi|388525551|gb|AFK50749.1| 50S ribosomal protein L3P [Thermogladius cellulolyticus 1633]
          Length = 396

 Score =  147 bits (372), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 111/336 (33%), Positives = 163/336 (48%), Gaps = 60/336 (17%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFP-----------------KDDPSKPCRL 43
           M HRK E PRHGSLG  PRKRAS    +V+ +P                 K +  K   L
Sbjct: 1   MGHRKLEAPRHGSLGVRPRKRASELSVRVRTWPAKTWIELLEERYGSEVEKLNVVKRPTL 60

Query: 44  TAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLC 103
            AF  YKAGMTH +   ++P + L  K     VT ++ PP+VV+G+  YV     L++  
Sbjct: 61  LAFPVYKAGMTHAMVVEDRPHTPLTGKPVFTPVTALDAPPIVVLGLRTYVSENGSLKTYG 120

Query: 104 TVWAQHLNE--EVRRRFYKNWCKSKKKAFTKYTKKYET----------------DDGKKD 145
             W   +N   EV  +FYK+    K  A     +KY +                + G K 
Sbjct: 121 EAWRSPVNAVAEVFEKFYKDNPFFKDAATKDIVRKYLSGLRKVNHGLVKPDPSGEYGFKF 180

Query: 146 IQAQLE-KMKKYCT------------------VIRKKAHLMEIQVNGGSVAQKVDFAYGF 186
           I+   E ++K+  T                  + +KK  + EI+V GG + +   +A   
Sbjct: 181 IETDYESRLKQILTGDVKAVSLIVSTIPVLSGIGKKKPEIFEIRVGGGKIDEITSYAEKV 240

Query: 187 FEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWH 244
               + +  VF + +++D+IGVTKGKG++GV+ R+GV  LPR  K  +G RK   IGA  
Sbjct: 241 TGGYVSVTDVFIEGQLVDVIGVTKGKGFQGVIKRFGVKELPRWHKHRKGSRK---IGARS 297

Query: 245 PARVSFT-VARAGQNGYHHRTEMNKKIYKLGKASQE 279
           P   + +   +AGQ G+H RTE+NK+I K+G +  E
Sbjct: 298 PGFGTMSEPPQAGQTGFHRRTELNKRILKIGASGLE 333


>gi|282164890|ref|YP_003357275.1| 50S ribosomal protein L3P [Methanocella paludicola SANAE]
 gi|282157204|dbj|BAI62292.1| 50S ribosomal protein L3P [Methanocella paludicola SANAE]
          Length = 341

 Score =  147 bits (372), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 150/299 (50%), Gaps = 43/299 (14%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPK--DDPSKPCRLTAFLGYKAGMTHIVR 58
           MSH     PR GSL + PR RA   + K +++ +  D P    +L + +G+KAGM+H+V 
Sbjct: 1   MSHP--HAPRRGSLAYSPRVRARSQKPKYRSWAELGDQP----KLQSLVGFKAGMSHVVM 54

Query: 59  DVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRF 118
             ++P S     E    VTIIETP + V G+  Y   P G   L   W            
Sbjct: 55  VDDRPHSTTEGMEISIPVTIIETPAMNVAGIRAYDDGPYGKHVLAEAWV----------- 103

Query: 119 YKNWCKSKKKAFTKYTKKYETD-----------DGKKDIQAQLE-----KMKKYCTVIRK 162
             N  K   K F +  K  +TD           DGK    A+L      K ++   + +K
Sbjct: 104 --NDAKDLAKLF-RLPKSVDTDAQLAKVAGLVKDGK---VAELRLLTYVKTEEVSGIPKK 157

Query: 163 KAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWG 222
              L+E +V GGS+ ++ +FA     KQ+  + +F   E++D+  +TKGKG +G V RWG
Sbjct: 158 VPELLENRVAGGSMDKRFEFAKSLLGKQVKPNDIFVPGELVDVSAITKGKGTQGPVKRWG 217

Query: 223 VTRLPRKTHRGLRK--VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
           +    RK  R  +K  V  +G W+P RV + V + GQ GYH RTE NK+I KLG+ ++E
Sbjct: 218 IAIQKRKHARTGKKRHVGNLGPWNPHRVRWQVPQLGQTGYHQRTEYNKRIIKLGEKAEE 276


>gi|340344791|ref|ZP_08667923.1| 50S ribosomal protein L3 [Candidatus Nitrosoarchaeum koreensis MY1]
 gi|339519932|gb|EGP93655.1| 50S ribosomal protein L3 [Candidatus Nitrosoarchaeum koreensis MY1]
          Length = 330

 Score =  147 bits (371), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 88/275 (32%), Positives = 152/275 (55%), Gaps = 9/275 (3%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           M HRK+  PR GS  + PR RA     +++ +PK++  +P ++ A  G+KAG   +V   
Sbjct: 1   MGHRKYAQPRRGSAAYYPRGRAKSMEARIRTWPKNNSDEP-KILAHCGFKAGCVQLVTID 59

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++  +    K+     T++ TPP+ ++GV GY K   GL +   V+A+   + + +    
Sbjct: 60  DREKTPNAGKQLVSLGTVLVTPPVSILGVRGYSKDHYGLHAEFDVYAKEFPKNISKEI-- 117

Query: 121 NWCKSKKKAFTKYTKKYETDDGK-KDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQK 179
           N+ K+K+ A     K      G+ K+I A +    +   + +KK ++ E  V+GG + ++
Sbjct: 118 NF-KNKEGAMENAEKIL----GRVKEIFAIVAVSPRDAGLEQKKPYIFEALVSGGDIKKQ 172

Query: 180 VDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVAC 239
                    K+I ID +F+    ID+  +TKGKG++GV+ R+GV +   K+ + +R+VA 
Sbjct: 173 FAHVKELLGKEIKIDQIFETGATIDVAAITKGKGWQGVIQRFGVKKKQHKSRKTVREVAS 232

Query: 240 IGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLG 274
           +G   PA V ++V RAGQ G+H RTE +K+I  +G
Sbjct: 233 LGPISPASVMYSVPRAGQMGFHQRTEYDKRIMVIG 267


>gi|3914741|sp|Q29293.1|RL3_PIG RecName: Full=60S ribosomal protein L3
          Length = 130

 Score =  147 bits (371), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 64/87 (73%), Positives = 78/87 (89%)

Query: 190 QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 249
           ++P++ VF +DEMID+IGVTKGKGY+GV +RW   +LPRKTHRGLRKVACIGAWHPAR +
Sbjct: 1   RVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARXA 60

Query: 250 FTVARAGQNGYHHRTEMNKKIYKLGKA 276
           F+VARAGQ GYHHRTE+NKKIYK+G+ 
Sbjct: 61  FSVARAGQKGYHHRTEINKKIYKIGQG 87


>gi|393796608|ref|ZP_10379972.1| 50S ribosomal protein L3P [Candidatus Nitrosoarchaeum limnia BG20]
          Length = 330

 Score =  147 bits (371), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 87/275 (31%), Positives = 148/275 (53%), Gaps = 9/275 (3%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           M HRK+  PR GS  + PR RA     +++ +P ++  +P ++ A  G+KAG   +V   
Sbjct: 1   MGHRKYAQPRRGSAAYYPRGRAKSMEARIRTWPTNNSDEP-KILAHCGFKAGCVQLVTID 59

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++  +    K+     T++ TPP+ ++G+ GY K   GL +   V+A    + + +    
Sbjct: 60  DRDKTPNAGKQLVSLGTVLVTPPVSILGIRGYSKDHYGLHAEFDVYANEFPKSISKEIN- 118

Query: 121 NWCKSKKKAFTKYTKKYETDDGK-KDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQK 179
              K+K+ A     K      G+ K+I A +    +   + +KK ++ E  V+GG V ++
Sbjct: 119 --LKNKEGALENAEKIL----GRVKEIFAIVAVSPRAAGLEQKKPYIFEALVSGGDVKKQ 172

Query: 180 VDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVAC 239
                    K+I ID +F+    ID+  +TKGKG++GV+ R+GV +   K+ + +R+VA 
Sbjct: 173 FAHVKELLGKEIKIDQIFETGATIDVAAITKGKGWQGVIQRFGVKKKQHKSRKTVREVAS 232

Query: 240 IGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLG 274
           +G   PA V ++V RAGQ G+H RTE +KKI  +G
Sbjct: 233 LGPISPASVMYSVPRAGQMGFHQRTEYDKKIMVIG 267


>gi|329765069|ref|ZP_08256653.1| 50S ribosomal protein L3P [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329138446|gb|EGG42698.1| 50S ribosomal protein L3P [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 330

 Score =  147 bits (371), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 148/275 (53%), Gaps = 9/275 (3%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           M HRK+  PR GS  + PR RA     +++ +P ++  +P ++ A  G+KAG   +V   
Sbjct: 1   MGHRKYAQPRRGSAAYYPRGRAKSMEARIRTWPTNNSDEP-KILAHCGFKAGCVQLVTID 59

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++  +    K+     T++ TPP+ ++G+ GY K   GL +   V+A    + + +    
Sbjct: 60  DRDKTPNAGKQLVSLGTVLVTPPVSILGIRGYSKDHYGLHAEFDVYANEFPKSISKEIN- 118

Query: 121 NWCKSKKKAFTKYTKKYETDDGK-KDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQK 179
              K+K+ A     K      G+ K+I A +    +   + +KK ++ E  V+GG + ++
Sbjct: 119 --LKNKEGALENAEKIL----GRVKEIFAIVAVSPRAAGLEQKKPYIFEALVSGGDIKKQ 172

Query: 180 VDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVAC 239
                    K+I ID +F+    ID+  +TKGKG++GV+ R+GV +   K+ + +R+VA 
Sbjct: 173 FAHVKELLGKEIKIDQIFETGATIDVAAITKGKGWQGVIQRFGVKKKQHKSRKTVREVAS 232

Query: 240 IGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLG 274
           +G   PA V ++V RAGQ G+H RTE +KKI  +G
Sbjct: 233 LGPISPASVMYSVPRAGQMGFHQRTEYDKKIMVIG 267


>gi|385804241|ref|YP_005840641.1| 50S ribosomal protein L3 [Haloquadratum walsbyi C23]
 gi|339729733|emb|CCC41011.1| 50S ribosomal protein L3 [Haloquadratum walsbyi C23]
          Length = 338

 Score =  147 bits (370), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 89/279 (31%), Positives = 143/279 (51%), Gaps = 12/279 (4%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GS+GF PRKRA     +++++  +D   P  +  F GYKAGMT ++   ++  S   
Sbjct: 7   PRKGSMGFSPRKRAESEVPRIRSWASND-GAPG-VQGFAGYKAGMTQVLMVNDEANSPRE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VT++ETPP+  V +  Y  TP G + L  VW +  +  + R        + + 
Sbjct: 65  GMEEAVPVTVVETPPMRAVALRAYEDTPYGSKPLTEVWGREFDTSLERTLDLPNEDTFED 124

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKA-HLMEIQVNGGSVAQKVDFAYGFF 187
                    ET D   D++     +      I KK   +ME +V GG++  +V+F     
Sbjct: 125 DAAALRDDAETGD-IDDVRLITHTLPAGMRNIPKKTPDVMETRVGGGTLTDRVEFGLNLI 183

Query: 188 EK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL----PRKTHRGLRKVACIG 241
               +  I  +F+  E +D  GVTKGKG +G V R+GV +      R+ +R  R++  +G
Sbjct: 184 SDGGEHEISDIFRAGEYLDAAGVTKGKGTQGPVKRFGVQKRKGKHARQGYR--RRIGNLG 241

Query: 242 AWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
            W+P+RV  TV + GQ GYH RTE+NK++ ++G  ++ +
Sbjct: 242 PWNPSRVRSTVPQQGQTGYHQRTELNKRLIEIGNGNEPT 280


>gi|355571383|ref|ZP_09042635.1| ribosomal protein L3 [Methanolinea tarda NOBI-1]
 gi|354825771|gb|EHF09993.1| ribosomal protein L3 [Methanolinea tarda NOBI-1]
          Length = 337

 Score =  147 bits (370), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 94/283 (33%), Positives = 142/283 (50%), Gaps = 16/283 (5%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFP--KDDPSKPCRLTAFLGYKAGMTHIVRDVEK 62
           K   PR GSL F PRKRA     + +++P  + DP     L  F GYK GMTH++   + 
Sbjct: 3   KINQPRKGSLAFSPRKRAKSPVPRYQSWPSYQGDPV----LQGFAGYKVGMTHVIMVDDH 58

Query: 63  PGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNW 122
             S    K+    VT++E PP+ V  +  Y +   G   L  VWA  L++ + +R     
Sbjct: 59  KNSPTEGKDIMVPVTVVEIPPMKVAAIRAYSRDTYGRHPLTEVWAGELDKALGKRI---- 114

Query: 123 CKSKKKAFTKYTKKYETDDGK---KDIQAQLEKMKKYCTVIRKKA-HLMEIQVNGGSVAQ 178
              K+  F+   +  +    K   ++I A +  +    + + KK   +MEI+V GG+V Q
Sbjct: 115 TLPKEYDFSGAMEALKDAIAKGVAEEIFAVMHTLPGQVSGVPKKVPEIMEIRVAGGTVQQ 174

Query: 179 KVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRK-- 236
           + +F  G   K++ +  + Q     DI  VT GKG +G V RWG+    RK  RG +K  
Sbjct: 175 RFEFIAGLLGKEVHLKNIIQPGAYADITAVTTGKGTQGPVKRWGIKLRKRKHARGGKKRH 234

Query: 237 VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
           V  +G W+P  V + V + GQ G+  RTE NK+I K+G+   E
Sbjct: 235 VGNLGPWNPHHVRWQVPQMGQMGFQQRTEFNKRILKIGENGDE 277


>gi|432332011|ref|YP_007250154.1| archaeal ribosomal protein L3 [Methanoregula formicicum SMSP]
 gi|432138720|gb|AGB03647.1| archaeal ribosomal protein L3 [Methanoregula formicicum SMSP]
          Length = 337

 Score =  147 bits (370), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 92/277 (33%), Positives = 131/277 (47%), Gaps = 4/277 (1%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   PR GSL F PRKRA  H  K +++P  +   P  L  F GYK GMTH+V   +   
Sbjct: 3   KINRPRRGSLAFSPRKRAKSHIPKYQSWPSVE-GAPI-LQGFAGYKVGMTHVVMVDDHKS 60

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
           S    KE    VT+IE P + V  +  Y K   G  +   +WA+ L+  + RR       
Sbjct: 61  SPTEGKEIMVPVTVIEVPAMKVAAIRAYSKDTYGKHAFTELWAEQLDGVLGRRINLPKEY 120

Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAY 184
            +  A  K++         +       +      V +K   LMEI+V G  + +  +FA 
Sbjct: 121 DRDAAVKKFSDAVAAGTVAEIYALAYTQPASMSGVPKKVPDLMEIKVGGADIKKLFEFAQ 180

Query: 185 GFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRK--VACIGA 242
           G   K++ +  V Q     DI  +T GKG +G V RWGV    RK   G +K  V  +G 
Sbjct: 181 GLLGKEVGLSNVIQTGAYADITAITTGKGTQGAVKRWGVALRKRKHAVGGKKRHVGTLGP 240

Query: 243 WHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
           W+P  + + V + GQ GY  RTE NK+I K+ + + E
Sbjct: 241 WNPHHIRWEVPQIGQLGYQQRTEFNKRILKVSENASE 277


>gi|47079404|gb|AAT10147.1| ribosomal protein L3 [uncultured marine group II euryarchaeote
           DeepAnt-JyKC7]
          Length = 358

 Score =  146 bits (369), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 91/300 (30%), Positives = 154/300 (51%), Gaps = 22/300 (7%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           P+ GS+GF PRKRA R  G++ ++P+ + S+  R+  F G+KAGMTH++     P S   
Sbjct: 7   PKRGSMGFSPRKRAIRPFGRITSWPETESSE-IRVQGFAGWKAGMTHVLMRDTNPHSTSA 65

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQH-----------LNEEVRRR 117
            +E  +AVT++E PP+ V+ V GY  TP G+++   +WA              N+    R
Sbjct: 66  GQEIRKAVTVVEVPPMKVLAVRGYHMTPYGMQTAGEIWADSSSGPDGLMPRFANQTRGDR 125

Query: 118 FYKNWCKSKKKA---------FTKYTKKYETDDGKKDIQAQLEKMKKYC-TVIRKKAHLM 167
             +   K  K+A                  TD    +++  +        +V  K   +M
Sbjct: 126 DIEEGRKPAKRAGRIPVREGGMNGDALAALTDSNLCEVRLIVATQPALVKSVPSKTPVIM 185

Query: 168 EIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 227
           E+ + GG    K+++A+     +I ID V++  + +D++G+TKGKG++GV+ R+GV  L 
Sbjct: 186 EVGLVGGDTGAKLEWAHERLGGEIGIDDVYEAGKELDVVGITKGKGWQGVIKRFGVKLLS 245

Query: 228 RKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEF 287
            K  +  R++  +G +    V  T+ +AGQ GYH RTE+NK+I ++    +   +    F
Sbjct: 246 HKNSKRRRQIGNMGDFGTGYVRKTIRQAGQMGYHKRTELNKRILRISNPGESDVTPAGGF 305


>gi|110668741|ref|YP_658552.1| 50S ribosomal protein L3P [Haloquadratum walsbyi DSM 16790]
 gi|121692171|sp|Q18GE9.1|RL3_HALWD RecName: Full=50S ribosomal protein L3P
 gi|109626488|emb|CAJ52949.1| 50S ribosomal protein L3 [Haloquadratum walsbyi DSM 16790]
          Length = 338

 Score =  146 bits (368), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/279 (31%), Positives = 142/279 (50%), Gaps = 12/279 (4%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GS+GF PRKRA     +++++  +D   P  +  F GYKAGMT ++   ++  S   
Sbjct: 7   PRKGSMGFSPRKRAESEVPRIRSWASND-GAPG-VQGFAGYKAGMTQVLMVNDEANSPRE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VT++ETPP+  V +  Y  TP G + L  VW +  +  + R        + + 
Sbjct: 65  GMEEAVPVTVVETPPMRAVALRAYEDTPYGSKPLTEVWGREFDTSLERTLDLPNEDTFED 124

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKA-HLMEIQVNGGSVAQKVDFAYGFF 187
                    ET D   D++     +      I KK   +ME +V GG++  +V+F     
Sbjct: 125 DAAALRDDAETGD-IDDVRLITHTLPAGMRNIPKKTPDVMETRVGGGTLTDRVEFGLDLI 183

Query: 188 EK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL----PRKTHRGLRKVACIG 241
               +  I  +F+  E +D  GVTKGKG +G V R+GV +      R+ +R  R++  +G
Sbjct: 184 SDGGEHEISDIFRAGEYLDAAGVTKGKGTQGPVKRFGVQKRKGKHARQGYR--RRIGNLG 241

Query: 242 AWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
            W+P+RV  TV + GQ GYH RTE+NK++ ++G   + +
Sbjct: 242 PWNPSRVRSTVPQQGQTGYHQRTELNKRLIEIGNGDEPT 280


>gi|48477712|ref|YP_023418.1| 50S ribosomal protein L3P [Picrophilus torridus DSM 9790]
 gi|74567866|sp|Q6L1C7.1|RL3_PICTO RecName: Full=50S ribosomal protein L3P
 gi|48430360|gb|AAT43225.1| large subunit ribosomal protein L3P [Picrophilus torridus DSM 9790]
          Length = 329

 Score =  146 bits (368), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 85/267 (31%), Positives = 137/267 (51%), Gaps = 13/267 (4%)

Query: 8   HPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKL 67
           H R GS+ + PR RA R +G ++++P+ +     ++ AF GYK GMTHI     +  S  
Sbjct: 6   HSRRGSMAYYPRVRAKRIQGDIRSWPEIEGQ--TKVQAFAGYKVGMTHIQMVDYRKNSVT 63

Query: 68  HKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKK 127
             +     VT++E PPL V+ +  Y +   GL  +   WA++++++V RR  K       
Sbjct: 64  AGQVIMAPVTVVEVPPLTVMSIRYYARGDNGLEVISEEWAENIDKDVLRRINK------- 116

Query: 128 KAFTKYTKKYETDDGKKDIQAQLEKMKKYCT-VIRKKAHLMEIQVNGGSVAQKVDFAYGF 186
               ++ K  E  D   D++  +    +  + V  K   + EI++ G ++  ++ +A   
Sbjct: 117 --INRHKKGIEVKD-VDDVRLMVHTNPQLVSGVPSKTPEIFEIRIGGSTIENRIKYAKER 173

Query: 187 FEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPA 246
               I      +    +D+I VTKGKG++GVV R+GV  LPRK  +  R +  +G WHP 
Sbjct: 174 LGSNISFSDFSKPGNFVDVIAVTKGKGFQGVVKRFGVKLLPRKNRKHRRMIGTLGPWHPD 233

Query: 247 RVSFTVARAGQNGYHHRTEMNKKIYKL 273
            V  TV +AGQ G+H RT  N +I K 
Sbjct: 234 WVRNTVPQAGQVGFHQRTIHNIRIIKF 260


>gi|119719148|ref|YP_919643.1| 50S ribosomal protein L3P [Thermofilum pendens Hrk 5]
 gi|119524268|gb|ABL77640.1| LSU ribosomal protein L3P [Thermofilum pendens Hrk 5]
          Length = 334

 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/270 (34%), Positives = 139/270 (51%), Gaps = 10/270 (3%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GS  + PRKRA     +V+ +P++          F GYK GM H++       S  +
Sbjct: 7   PRRGSRAYYPRKRARSIVARVRRWPQNREG----FLGFAGYKVGMLHVIGVEMNKNSPFY 62

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
            +E   A T+IE PPL VV V  Y KTP G ++LC VWA+ L +++ R F     K +  
Sbjct: 63  GQERFYAATVIEVPPLKVVAVRVYEKTPYGKKTLCEVWAKDLPKDLERVF--PLPKDQSY 120

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGFFE 188
              +  K  E      +++       +   + +KK  L+EI V GG   + +  A     
Sbjct: 121 HEEQLKKLEEVKSRVSEVRVLAATQPRLSGLGKKKPELIEIAV-GGPPEKALSLALEKLG 179

Query: 189 KQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPA 246
           K + I  VF++ + ID+I VTKGKG++G V R+GV  +PR  K  +G  ++  +G   PA
Sbjct: 180 KDLTISDVFKEGDYIDVIAVTKGKGFQGSVKRFGVEEMPRWHKHRKGHSRIGSVGPQKPA 239

Query: 247 RVSFTVARAGQNGYHHRTEMNKKIYKLGKA 276
            + F     GQ G+H RTE NK+I K+G A
Sbjct: 240 -IMFYTPFPGQLGFHQRTEYNKRILKVGDA 268


>gi|410670351|ref|YP_006922722.1| 50S ribosomal protein L3P [Methanolobus psychrophilus R15]
 gi|409169479|gb|AFV23354.1| 50S ribosomal protein L3P [Methanolobus psychrophilus R15]
          Length = 337

 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 138/278 (49%), Gaps = 6/278 (2%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   PR GSL + PRKRA  H  +  ++P+   +   +L  F GYK GMTH++   +   
Sbjct: 3   KGHRPRRGSLAYSPRKRAKSHIPRFNSWPES--AGEPKLQDFAGYKVGMTHVILVDDVKN 60

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
           S     E    VT++ETP + V  +  Y     G +++   W+  L+  + +  +     
Sbjct: 61  SLTEGMEISVPVTVVETPAVRVAAIRAYASDSYGGKAIAEAWSSDLDPSLGKTIHLPKTA 120

Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCT-VIRKKAHLMEIQVNGGSVAQKVDFA 183
           +   +  K +   E +    DI+     + K  T V +K + +ME  V+G  +  + ++A
Sbjct: 121 TTDASLEKISSLIE-NGTVSDIKVVTYTLPKNLTGVPKKNSDIMETAVSGSDLKARFEYA 179

Query: 184 YGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR--GLRKVACIG 241
                 +I I  VF     ID+  +T GKG +G V RWG++ +  K  R   LR++  +G
Sbjct: 180 KSILGSEIKISDVFNNGTFIDVAAITIGKGTQGPVKRWGISMMKGKHSRQGSLRQIGTLG 239

Query: 242 AWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
            +HPARV++ V + GQ GYH RT+ NK+I ++     E
Sbjct: 240 PFHPARVNWRVPQMGQMGYHQRTDFNKRILRVSTNGDE 277


>gi|297527410|ref|YP_003669434.1| 50S ribosomal protein L3 [Staphylothermus hellenicus DSM 12710]
 gi|297256326|gb|ADI32535.1| ribosomal protein L3 [Staphylothermus hellenicus DSM 12710]
          Length = 395

 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/337 (32%), Positives = 167/337 (49%), Gaps = 62/337 (18%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFP------------------KDDPSKPCR 42
           M HRK   PRHGSLG  PRKRA++   +++++P                  K    KP  
Sbjct: 1   MGHRKHSAPRHGSLGVRPRKRAAKIVPRIRSWPTQSWFDLLVEKLGDEATDKGISPKPV- 59

Query: 43  LTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTP-RGLRS 101
           L  +  YKAGM+H +   ++P +    KE    VTI++ PP++++G+ GY   P  GL S
Sbjct: 60  LLGYAAYKAGMSHAIIIDDRPHTFTSGKEIAVPVTILDAPPILILGIRGYKIHPMHGLLS 119

Query: 102 LCTVW---AQHLNE-----------------EVRRRFYK-----NWCKSKKKAFTKYTKK 136
              VW    + L E                 +V R++ K     N    K     +Y  K
Sbjct: 120 FGEVWRSPVEALKEVYEKIYSDNPFVNLGIKDVVRKYLKGLRKVNPGLVKPDPNNEYGFK 179

Query: 137 YETDDGKKDIQ----AQLEKMKKYCTVI-------RKKAHLMEIQVNGGSVAQKVDFAYG 185
           +  ++ ++ +Q    A L  ++   + I       +KK  ++EI+V GG++  ++ +A  
Sbjct: 180 FLENNWEEKLQRLKAADLADIRVIASTIPVLSGIGKKKPEIIEIKVGGGTLNDRIAYAEK 239

Query: 186 FFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAW 243
                I +D VF++ + IDIIGVTKGKG++GV+ R+GV  LPR  K  +G RK   IG+ 
Sbjct: 240 LLGNYITVDQVFREGQFIDIIGVTKGKGFQGVIKRFGVKELPRWHKHRKGSRK---IGSR 296

Query: 244 HPARVSFT-VARAGQNGYHHRTEMNKKIYKLGKASQE 279
            P   + +   + GQ G+H RTE NK+I K+G    E
Sbjct: 297 SPGFGTMSETPQPGQTGFHRRTEYNKRIIKIGVNGWE 333


>gi|386876303|ref|ZP_10118425.1| ribosomal protein L3, partial [Candidatus Nitrosopumilus salaria
           BD31]
 gi|386805879|gb|EIJ65376.1| ribosomal protein L3, partial [Candidatus Nitrosopumilus salaria
           BD31]
          Length = 296

 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 147/279 (52%), Gaps = 9/279 (3%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           M  RK+  PR GSL + PR RA     +++++PK +  +P ++ A  G+KAG   +V   
Sbjct: 1   MGARKYHQPRRGSLAYSPRIRAKSMEARIRSWPKLNSEEP-KILAHCGFKAGCVQLVTID 59

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRF-Y 119
           ++       K+     T++ TPP++++G+ GY K   G  +   V+A+ + + + +    
Sbjct: 60  DRDKVPNAGKQLVSLGTVLVTPPVLILGIRGYSKDHYGAHAEFDVYAEDIPKNIAKEITI 119

Query: 120 KNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQK 179
           KN   S + A  +  K        K+I A +    +   + +KK ++ E  V+GG + ++
Sbjct: 120 KNIEGSIENAEKRLGKI-------KEIFAIVAVSPRAAGLEQKKPYIFEASVSGGDIQKQ 172

Query: 180 VDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVAC 239
                    K+I ID +F+    +D+  +TKGKG++GV+ RWGV +   K+ + +R+V  
Sbjct: 173 FTHVKELLGKEIKIDQIFETGATVDVAAITKGKGWQGVIQRWGVKKKQHKSRKTVREVGS 232

Query: 240 IGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ 278
           +G   P  V +TV RAGQ G+H RTE +K+I  +G    
Sbjct: 233 LGPISPQSVMYTVPRAGQMGFHQRTEYDKRIMVMGNTDN 271


>gi|435852138|ref|YP_007313724.1| archaeal ribosomal protein L3 [Methanomethylovorans hollandica DSM
           15978]
 gi|433662768|gb|AGB50194.1| archaeal ribosomal protein L3 [Methanomethylovorans hollandica DSM
           15978]
          Length = 337

 Score =  145 bits (365), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 148/298 (49%), Gaps = 12/298 (4%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   PR GSL F PRKRA     + +++P  D     ++  F GYK GMTH+V   +   
Sbjct: 3   KGHRPRRGSLAFSPRKRAQSPIPRYRSWPVSDAG--IKIQDFAGYKVGMTHVVIIDDTKN 60

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
           S     E    VT+IETP + V  +  Y K   G R+L   W + L+  + +        
Sbjct: 61  SLTEGLEITVPVTVIETPAIRVAAIRAYGKDTVGERALAEAWTKELDTSLAQTIKVPLKH 120

Query: 125 SKKKAFTKYTKKYETDDGK-KDIQAQLEKMKKYCT-VIRKKAHLMEIQVNGGSVAQKVDF 182
               A  K  +    ++GK  DI+     + K  T V +K A +ME  ++G +   K ++
Sbjct: 121 DTNAALGKIEQLM--NEGKVSDIRVVTYTLPKSITGVPKKNADIMETGISGANSKDKYEY 178

Query: 183 AYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR--GLRKVACI 240
           A     K++ I  VF+   ++D+  +T GKG +G V RWG+     K  R   LR++  +
Sbjct: 179 AKSILGKEVRISDVFKGGSLVDVAAITIGKGTQGPVKRWGIMLQKGKHSRQGSLRQIGTL 238

Query: 241 GAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESH--SAMTEFD--RSVYLL 294
           G + PA V++ V + GQ G+H RTE NK+I+K+G   +E +     T F   R+ Y+L
Sbjct: 239 GPFRPAHVNWRVPQMGQTGFHQRTECNKRIFKIGTNPEEINPVGGFTNFGLVRNDYVL 296


>gi|330835825|ref|YP_004410553.1| 50S ribosomal protein L3P [Metallosphaera cuprina Ar-4]
 gi|329567964|gb|AEB96069.1| 50S ribosomal protein L3P [Metallosphaera cuprina Ar-4]
          Length = 341

 Score =  145 bits (365), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/288 (32%), Positives = 150/288 (52%), Gaps = 28/288 (9%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           M HRK   PR GS G  PRKR+       +++P  + S P  L  F+GYKAGMTH+    
Sbjct: 1   MGHRKLSSPRRGSAGLRPRKRSEDILPSPRSYPVLNSSSPVML-GFIGYKAGMTHVYMID 59

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRG-LRSLCTVWAQHLNEEVRRRFY 119
           E   S ++ KE    VT+IETPP++V+ +  Y    +G   S+  VW    +   + ++ 
Sbjct: 60  EDKSSSMYGKEIYMPVTVIETPPILVMSLRAYAIDGKGESMSIGEVWGDLSD---KSKYI 116

Query: 120 KNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLM-----------E 168
               KS K       +K +T+   K I++ L+ +  +  ++  + +L+           E
Sbjct: 117 TRRIKSLK------IQKEKTEQQLKKIESNLDNISFFRLLVSTQPYLIPSLGKKTPDIAE 170

Query: 169 IQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR 228
           IQ+ GG+   +++         + +  VF + ++IDI+GVT G G++GV+ R+GV  LPR
Sbjct: 171 IQIGGGNPKAQLELGLKLLGNTVSVRDVFNEGQLIDILGVTTGYGFQGVIKRYGVQELPR 230

Query: 229 --KTHRGLRKVACIGAWHPARVSFT-VARAGQNGYHHRTEMNKKIYKL 273
             K  +G RKV   G   P+  + + V + GQ GYH RTE NK+I ++
Sbjct: 231 WHKHRKGSRKVGTKG---PSLGTPSYVPQPGQMGYHRRTEYNKRILRI 275


>gi|88603499|ref|YP_503677.1| 50S ribosomal protein L3P [Methanospirillum hungatei JF-1]
 gi|109893522|sp|Q2FU91.1|RL3_METHJ RecName: Full=50S ribosomal protein L3P
 gi|88188961|gb|ABD41958.1| LSU ribosomal protein L3P [Methanospirillum hungatei JF-1]
          Length = 337

 Score =  144 bits (364), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 91/275 (33%), Positives = 135/275 (49%), Gaps = 8/275 (2%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFP--KDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSK 66
           PR GSL + PRKRA     K  A+P  + +P+    L  F GYK GMTH++   +   S 
Sbjct: 7   PRMGSLAYSPRKRAKSPVPKYHAWPAYQGEPA----LQGFAGYKVGMTHVIMVDDHAHSP 62

Query: 67  LHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSK 126
              K+    VT+IE P + V  +  Y     G   L  VWA   ++E+ RR   +    +
Sbjct: 63  NEGKDIMVPVTVIEVPDMRVAAIRVYRHDTYGNHVLTEVWADSFDKELSRRLNLSKNYKR 122

Query: 127 KKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGF 186
           ++A  K  +  E D     +     +      V +K   LME +++GGS+ ++ ++    
Sbjct: 123 EEAEKKIREALEADKIVDVVALTYTRPSVLTGVPKKVPDLMETRIDGGSMTERFEYGLSM 182

Query: 187 FEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAWH 244
             K   I ++F+  +  D+  +TKGKG +G V RWGV    RK  RG   R V  +G W 
Sbjct: 183 LGKDFDIRSLFKVGQYTDVTAITKGKGTQGPVKRWGVHLRKRKHSRGKKERHVGTLGPWT 242

Query: 245 PARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
           P  V + V   GQ GYH RTE NK++ K+G+   E
Sbjct: 243 PHHVRWQVPMMGQMGYHQRTEFNKRLLKIGEDGAE 277


>gi|374630590|ref|ZP_09702975.1| LSU ribosomal protein L3P [Methanoplanus limicola DSM 2279]
 gi|373908703|gb|EHQ36807.1| LSU ribosomal protein L3P [Methanoplanus limicola DSM 2279]
          Length = 337

 Score =  144 bits (363), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 96/280 (34%), Positives = 138/280 (49%), Gaps = 10/280 (3%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSL + PRKRA     K +++ ++   +P +L  F GYK GMTHIV   +   S   
Sbjct: 7   PRRGSLAYSPRKRAKSQVPKYQSW-QECAGEP-KLQGFAGYKVGMTHIVMVDDHKNSPSE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
            KE    VTI+E PP+  + V  Y K   G +    VWA  L+ +++ R        K  
Sbjct: 65  GKEIAVPVTIVEIPPIKAMAVRAYTKDTYGKKVFAEVWADELDGKLKDRIS---IPKKNN 121

Query: 129 AFTKYTKKYETDDGKK--DIQAQLEKMKKYCTVIRKKA-HLMEIQVNGGSVAQKVDFAYG 185
           A     K  E  +  K  DI   +       T + KK   +ME++V GG +    D A G
Sbjct: 122 AEENIQKINEAIEAGKVIDIFVLVHTQPAMLTGVPKKVPDMMEMRVGGGDIKACFDHAIG 181

Query: 186 FFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRK--VACIGAW 243
            F +++ ++ +    + ID+  VT GKG  G V RWG+    RK  RG +K  +  +G W
Sbjct: 182 LFGREVELEDIAGVGQYIDVTAVTTGKGTNGPVKRWGIPVRKRKHSRGKKKRHIGNLGPW 241

Query: 244 HPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSA 283
            P  V + V + GQ GY  RTE NK+I K+G   +E + A
Sbjct: 242 TPHHVRWQVPQIGQMGYQQRTEFNKRILKVGDNPEEINPA 281


>gi|407462403|ref|YP_006773720.1| 50S ribosomal protein L3P [Candidatus Nitrosopumilus koreensis AR1]
 gi|407046025|gb|AFS80778.1| 50S ribosomal protein L3P [Candidatus Nitrosopumilus koreensis AR1]
          Length = 331

 Score =  144 bits (363), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 146/280 (52%), Gaps = 8/280 (2%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           M  RK   PR GSL + PR RA     +++A+PK D  +P ++ A  G+KAG   IV   
Sbjct: 1   MGARKRHSPRRGSLAYSPRVRAKSMEARIRAWPKLDSEEP-KILAHCGFKAGCVQIVSID 59

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRF-Y 119
           ++       K+     T++ TPP++++G+ GY K   GL +   V+A+ + + + +    
Sbjct: 60  DREKVPNAGKQLVSLGTVLVTPPVLILGIRGYSKDHDGLHAEFDVYAEDIPKNIAKEISL 119

Query: 120 KNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQK 179
           KN  ++      K  KK       K+I A +        + +KK ++ E  V+GG + ++
Sbjct: 120 KNKQENALDNAEKSLKKI------KEIFAIVAVSPSAAGLEQKKPYVFEASVSGGDIPKQ 173

Query: 180 VDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVAC 239
                    K+I ID +F+    +D+  +TKGKG++GV+ RW V +   K+ + +R+V  
Sbjct: 174 FAHVKELLGKEIKIDQIFETGASVDVAAITKGKGWQGVLKRWNVKKKQHKSRKTVREVGS 233

Query: 240 IGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
           +G   P  V +TV RAGQ G+H R E +K+I  +G   ++
Sbjct: 234 LGPISPQSVMYTVPRAGQFGFHQRIEYDKRIMIMGNTEED 273


>gi|146302876|ref|YP_001190192.1| 50S ribosomal protein L3P [Metallosphaera sedula DSM 5348]
 gi|172046889|sp|A4YCW6.1|RL3_METS5 RecName: Full=50S ribosomal protein L3P
 gi|145701126|gb|ABP94268.1| LSU ribosomal protein L3P [Metallosphaera sedula DSM 5348]
          Length = 341

 Score =  144 bits (363), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 94/289 (32%), Positives = 143/289 (49%), Gaps = 30/289 (10%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           M HRK   PR GS G  PRKR+       +++P+ +   P  L  F+GYK GMTHI    
Sbjct: 1   MGHRKLSSPRRGSAGLRPRKRSEELLPSPRSYPEVNLPNPVTL-GFVGYKVGMTHIFMID 59

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRS-LCTVWAQ--HLNEEVRRR 117
           E   S +  KE    VT++ETPP+ V+ +  Y    RG  S +  VW       + + RR
Sbjct: 60  EDRSSSMFGKEIYVPVTVLETPPIYVLALRAYGLNNRGEHSVMGEVWGDLGDFGKFITRR 119

Query: 118 FYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLM---------- 167
                   +KK           +   KDI++ LE +  +  ++  + HL+          
Sbjct: 120 IRGLKIDKEKK-----------EHQLKDIESNLESVSYFRLLVSTQPHLIPALGKKTPDI 168

Query: 168 -EIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
            E+Q+ GG+   ++++        + +  VF++ +++DIIGVTKG G++GV+ R+GV  L
Sbjct: 169 VEVQIGGGNTKNQLEYGLKLLGNTLSVRDVFKEGQLMDIIGVTKGHGFQGVIKRYGVQEL 228

Query: 227 PR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKL 273
           PR  K  +G RKV   G          V + GQ G+H RTE NK+I K+
Sbjct: 229 PRWHKHRKGSRKVGTKGPS--LGTPSYVPQPGQMGFHRRTEYNKRILKI 275


>gi|161528317|ref|YP_001582143.1| 50S ribosomal protein L3P [Nitrosopumilus maritimus SCM1]
 gi|160339618|gb|ABX12705.1| ribosomal protein L3 [Nitrosopumilus maritimus SCM1]
          Length = 331

 Score =  144 bits (363), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 145/280 (51%), Gaps = 8/280 (2%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           M  RK   PR GSL + PR RA     +++A+PK D  +P ++ A  G+KAG   IV   
Sbjct: 1   MGARKRHSPRRGSLAYSPRVRAKSMEARIRAWPKLDSEEP-KILAHCGFKAGCVQIVSID 59

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRF-Y 119
           ++       K+     T++ TPP++++G+ GY K   GL +   V+A+ + + + +    
Sbjct: 60  DREKVPNAGKQLVSLGTVLVTPPVLILGIRGYSKDHDGLHAEFDVYAEDIPKSIAKEISL 119

Query: 120 KNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQK 179
           KN  ++      K  KK       K+I A +        + +KK ++ E  V+GG + ++
Sbjct: 120 KNKQENALDNAEKSLKKI------KEIFAIVAISPSAAGLEQKKPYIFEASVSGGDIPKQ 173

Query: 180 VDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVAC 239
                    K+I ID +F+    +D+  +TKGKG++GV+ RW V +   K+ + +R+V  
Sbjct: 174 FAHVKELLGKEIKIDQIFETGASVDVAAITKGKGWQGVLKRWNVKKKQHKSRKTVREVGS 233

Query: 240 IGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
           +G   P  V +TV RAGQ G+H R E +K+I  +G    +
Sbjct: 234 LGPISPQSVMYTVPRAGQFGFHQRVEYDKRIMIMGNTDDD 273


>gi|156937755|ref|YP_001435551.1| 50S ribosomal protein L3P [Ignicoccus hospitalis KIN4/I]
 gi|156566739|gb|ABU82144.1| LSU ribosomal protein L3P [Ignicoccus hospitalis KIN4/I]
          Length = 358

 Score =  143 bits (361), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 99/296 (33%), Positives = 155/296 (52%), Gaps = 29/296 (9%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           M  RK E PR GS G  PRKRA+    +V+++P  D  KP    AFLGYK GMTH++   
Sbjct: 1   MGARKKEAPRRGSAGLRPRKRAASIVPRVRSWPSIDEVKPL---AFLGYKVGMTHVIMID 57

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTP-RGLRSLCTVW-------AQHLNE 112
           ++       +E    VT+IETPP+VV+G   Y   P RG  +L  VW        + L E
Sbjct: 58  DREHVDTAGQEIFVPVTVIETPPMVVLGARVYGYDPNRGRYALTEVWRNPSDTIKEKLGE 117

Query: 113 EVRRRFYKNWCKSKKKAFTKYT--KKYETDDGKKDIQAQLEKMKKYCTVI---------- 160
           EV R++     K       +    K +E    +K++    EK+     ++          
Sbjct: 118 EVLRKYLLGMSKRLPHMVEELGPGKGFEFKVPEKELDVDPEKVVGVGLIMSSIPFLAGGV 177

Query: 161 -RKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVT 219
            +K   ++E++V GGS  + +++A G   + + ++ V +  + +D+IGVTKGKG++GV+ 
Sbjct: 178 SKKAPDILEVKV-GGSPVEALEYAKGKLGQLVDVEEVIEAGKFVDVIGVTKGKGFQGVIK 236

Query: 220 RWGVTRLPR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKL 273
           R+GV  LP+  K  +G R+V    +W     S+ V + GQ GYH RT+ NK++  +
Sbjct: 237 RFGVKELPKWHKHRKGSRRVGA-RSWGKGTSSY-VPQPGQMGYHRRTDYNKRVLMI 290


>gi|116755016|ref|YP_844134.1| 50S ribosomal protein L3P [Methanosaeta thermophila PT]
 gi|121693633|sp|A0B9X0.1|RL3_METTP RecName: Full=50S ribosomal protein L3P
 gi|116666467|gb|ABK15494.1| LSU ribosomal protein L3P [Methanosaeta thermophila PT]
          Length = 335

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/279 (33%), Positives = 147/279 (52%), Gaps = 30/279 (10%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSL F PRKRA     +++++  D+ +    +  F GYKAGMTH++   ++P S   
Sbjct: 7   PRRGSLAFSPRKRAKSEVPRIRSWVADERAG---MAGFAGYKAGMTHVIMIDDRPRSLTE 63

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E    VT++E PP+ V  +  Y     G+R    +WA++L++++ R       K+++ 
Sbjct: 64  GMEISVPVTVVEVPPMSVAALRVYEPYNGGIRPAGELWAENLSQDLERAI--TIPKARRG 121

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKM-----------KKYCTVIRKKAHLMEIQVNGGSVA 177
           A  +            DI+++++++           +    V +K   +MEI V G SV 
Sbjct: 122 ASLE------------DIESRVDELCEIRVLAHTNPRLLTGVPKKVPDIMEIPVTGRSVE 169

Query: 178 QKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LR 235
           +++  A G    Q+ +  +F   E ID+  VTKGKG +G V RWG+    RK  R   LR
Sbjct: 170 EQLKAAEGLLGSQVAVSNIFNVGEWIDVSAVTKGKGTQGPVKRWGIMLQKRKHSRTGKLR 229

Query: 236 KVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLG 274
            V  +G WHPAR+S+ V + GQ GYH RTE NK+I  +G
Sbjct: 230 HVGNLGPWHPARISWRVPQLGQTGYHQRTEFNKRIMAIG 268


>gi|156359545|ref|XP_001624828.1| predicted protein [Nematostella vectensis]
 gi|156211630|gb|EDO32728.1| predicted protein [Nematostella vectensis]
          Length = 94

 Score =  142 bits (358), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 63/85 (74%), Positives = 74/85 (87%)

Query: 192 PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFT 251
           P+  VF  DEMID+IGVTKG G++GV  RWG  +LPRKTH+GLRKVACIGAWHPARVSF+
Sbjct: 1   PVRKVFSPDEMIDVIGVTKGHGFKGVTYRWGTKKLPRKTHKGLRKVACIGAWHPARVSFS 60

Query: 252 VARAGQNGYHHRTEMNKKIYKLGKA 276
           VARAGQ GYHHRTE+NKKIY++G+ 
Sbjct: 61  VARAGQAGYHHRTELNKKIYRIGQG 85


>gi|449708742|gb|EMD48143.1| 60S ribosomal protein L3, partial [Entamoeba histolytica KU27]
          Length = 121

 Score =  141 bits (356), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 67/120 (55%), Positives = 87/120 (72%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSHRKFE PRHGSL F PRKR  + R  V AFPKD+ ++   LT FLG+KAGMTH++R+V
Sbjct: 1   MSHRKFEAPRHGSLAFHPRKRVHKVRATVSAFPKDNAAEKPHLTGFLGFKAGMTHVIREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++  +KL K    E VTIIETPP+VV G VGY KT  GL+ +  V+A+H+ +E +RR+ K
Sbjct: 61  KRTNTKLPKDGVLEPVTIIETPPMVVAGFVGYKKTTTGLKPITAVFAEHIADEFKRRYTK 120


>gi|169626513|ref|XP_001806656.1| hypothetical protein SNOG_16548 [Phaeosphaeria nodorum SN15]
 gi|111054968|gb|EAT76088.1| hypothetical protein SNOG_16548 [Phaeosphaeria nodorum SN15]
          Length = 91

 Score =  140 bits (354), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 65/84 (77%), Positives = 74/84 (88%)

Query: 1  MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
          MSHRKFE PRHGSL FLPRKRA+RHRGKVK+FPKDDP KP  LTA +GYKAGMT IVRD+
Sbjct: 1  MSHRKFEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60

Query: 61 EKPGSKLHKKETCEAVTIIETPPL 84
          ++PG+KLHKKE  EA T+IETPP+
Sbjct: 61 DRPGAKLHKKEIVEACTVIETPPV 84


>gi|37654302|gb|AAQ96256.1| LRRGT00043 [Rattus norvegicus]
          Length = 867

 Score =  140 bits (354), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 69/132 (52%), Positives = 94/132 (71%), Gaps = 6/132 (4%)

Query: 174 GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 233
           G+VA+K+D+A        P++ VF + EMID++G+TKGKGY+GV +RW   + PRKTH+G
Sbjct: 327 GTVAEKLDWAREAAGAAGPLNQVFGQGEMIDVMGMTKGKGYKGVTSRWHTKKPPRKTHQG 386

Query: 234 LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQESHSAMTEF 287
           LRKVACIGAW PA V+F+VARAGQ GYHH+TE NKKIYK+G+           ++A T++
Sbjct: 387 LRKVACIGAWLPAHVAFSVARAGQKGYHHQTETNKKIYKIGQGYLIKDGKLTKNNASTDY 446

Query: 288 DRSVYLLSSLMG 299
           D S   ++ L G
Sbjct: 447 DLSDRSINPLGG 458


>gi|383319753|ref|YP_005380594.1| 50S ribosomal protein L3 [Methanocella conradii HZ254]
 gi|379321123|gb|AFD00076.1| LSU ribosomal protein L3P [Methanocella conradii HZ254]
          Length = 341

 Score =  140 bits (353), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 92/299 (30%), Positives = 142/299 (47%), Gaps = 34/299 (11%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSH     PR GSL + PR RA   + K + +   +  +  ++ + +G+KAGM+H++   
Sbjct: 1   MSHP--HAPRRGSLAYSPRVRARSQKPKYRNW--AELGEQPKIQSLIGFKAGMSHVLMID 56

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++P S     E    VTIIE P + V G+  Y   P G + +   WA  L +  R     
Sbjct: 57  DRPHSTTEGMEIAVPVTIIEAPAMHVAGIRAYDDGPYGKKVIAEAWASDLKDLAR----- 111

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCT--------------VIRKKAHL 166
                      +  +K    DG+    A L K  K                 + +K   L
Sbjct: 112 ---------LIRLPRKAVDTDGQLAKIAGLVKEGKVADLRLLTYVKTEDVSGIPKKVPEL 162

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           +E ++ GGS+ ++ + A     KQ+  + +F   E++D+  +TKGKG +G V RWG+   
Sbjct: 163 VENRIAGGSMDKRFELAKSLLGKQVKANDIFSPGELVDVSAITKGKGTQGPVKRWGIAIQ 222

Query: 227 PRKTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSA 283
            RK  R    R V  +G W+P R+ + V + GQ GYH RTE NK+I KLG  ++E   A
Sbjct: 223 KRKHARTGKRRHVGNLGPWNPHRIRWQVPQLGQTGYHQRTEYNKRIIKLGDKAEEVTPA 281


>gi|320101368|ref|YP_004176960.1| 50S ribosomal protein L3P [Desulfurococcus mucosus DSM 2162]
 gi|319753720|gb|ADV65478.1| LSU ribosomal protein L3P [Desulfurococcus mucosus DSM 2162]
          Length = 396

 Score =  140 bits (352), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 105/338 (31%), Positives = 160/338 (47%), Gaps = 62/338 (18%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDD------------------PSKPCR 42
           M HRK   PRHGSLG  PRKRA     +V+ +P+                     +KP  
Sbjct: 1   MGHRKLHAPRHGSLGVRPRKRAEELTPRVRRWPEKSWFDIVVERLGSEAASRGIAAKPV- 59

Query: 43  LTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRG-LRS 101
           L  F  YKAGMTH V   ++P + +  KE    VTI++ PP+VV+GV  YV    G L++
Sbjct: 60  LLGFPVYKAGMTHAVVVEDRPNTPVSGKEVFTPVTILDAPPIVVLGVRTYVVGEDGYLKA 119

Query: 102 LCTVWAQHLN---------------------EEVRRRFYK----NWCKSKKKAFTKYTKK 136
               W   ++                     + VR+  Y     N    K     +Y  K
Sbjct: 120 KGEAWRSPVDAVLKAYEELYAGNPLFNMNGRDVVRKYLYGLRRLNHGLVKPDPSGEYGFK 179

Query: 137 YETDDGKK-----------DIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYG 185
           +  + G+K           D++     +  +  + +KK  ++E+++ GGS+ +++ +   
Sbjct: 180 FIAESGEKEVKEVFSGEVADVRVIASTIPVFSGIGKKKPEIVELKIGGGSIDERLRYGES 239

Query: 186 FFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAW 243
                +    VF + + ID+IGVTKGKG++GVV R+GV  LPR  K  +G RK   IGA 
Sbjct: 240 ILGGYVKAADVFMEGQFIDVIGVTKGKGFQGVVKRFGVKELPRWHKHRKGSRK---IGAR 296

Query: 244 HPARVSFT-VARAGQNGYHHRTEMNKKIYKLGKASQES 280
            P   + +   +AGQ G+H RTE NK+I ++G    E+
Sbjct: 297 SPGFGTMSEPPQAGQMGFHRRTEYNKRILRIGLNGLEA 334


>gi|390938993|ref|YP_006402731.1| 50S ribosomal protein L3 [Desulfurococcus fermentans DSM 16532]
 gi|390192100|gb|AFL67156.1| ribosomal protein L3 [Desulfurococcus fermentans DSM 16532]
          Length = 396

 Score =  140 bits (352), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 106/338 (31%), Positives = 163/338 (48%), Gaps = 62/338 (18%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDD------------------PSKPCR 42
           M HRK   PRHGSLG  PRKRA     +VK +P+                     ++P  
Sbjct: 1   MGHRKLHAPRHGSLGVRPRKRAEELTPRVKRWPEKSWFDILVERLGNEATSQGVVARPV- 59

Query: 43  LTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRG-LRS 101
           L  F  YKAGMTH +   ++P + +  KE    VTI++ PP+VV+GV  Y+    G L++
Sbjct: 60  LLGFPVYKAGMTHAIIVEDRPNTPVTGKEVFTPVTILDAPPIVVLGVRTYIIDEEGYLKT 119

Query: 102 LCTVW-------AQHLNE-------------EVRRRFYK-----NWCKSKKKAFTKYTKK 136
               W       A+   E             +V R++       N    K +  ++Y  K
Sbjct: 120 KGEAWRSPHDAVAKAFEELYAGIPLMGISVKDVVRKYLHGLRKVNHGLVKPEPSSEYGFK 179

Query: 137 YETDDGKKDIQAQLEKMKKYCTVI-----------RKKAHLMEIQVNGGSVAQKVDFAYG 185
           +  +  + +++  L        VI           +KK  ++E+++ GGS+ +++ +A G
Sbjct: 180 FVAESSESELRDALSGEIADVRVIASTIPVLSGIGKKKPEIIELKIGGGSIDERLKYAEG 239

Query: 186 FFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAW 243
                +    VF + + +D+IGVTKGKG++GVV R+GV  LPR  K  +G RK   IGA 
Sbjct: 240 ILGGYVKASDVFMEGQFVDVIGVTKGKGFQGVVKRFGVKELPRWHKHRKGSRK---IGAR 296

Query: 244 HPARVSFT-VARAGQNGYHHRTEMNKKIYKLGKASQES 280
            P   + +   +AGQ G+H RTE NK+I K+G    E+
Sbjct: 297 SPGFGTMSEPPQAGQMGFHRRTEYNKRILKMGLNGLET 334


>gi|398022540|ref|XP_003864432.1| ribosomal protein L3, putative, partial [Leishmania donovani]
 gi|322502667|emb|CBZ37750.1| ribosomal protein L3, putative, partial [Leishmania donovani]
          Length = 98

 Score =  139 bits (351), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 64/98 (65%), Positives = 82/98 (83%)

Query: 1  MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
          MSH KFEHPRHG LGFLPRKR+ + RG+ +AFPKDD ++   LT+F+ +KAGMTHIVRDV
Sbjct: 1  MSHCKFEHPRHGHLGFLPRKRSRQIRGRARAFPKDDATQKPHLTSFMVFKAGMTHIVRDV 60

Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRG 98
          ++PGSK++KKE  E VTI+E PP+V+VG+VGY +TP G
Sbjct: 61 DRPGSKVNKKEVVEPVTILEAPPMVIVGIVGYRQTPVG 98


>gi|305662572|ref|YP_003858860.1| 50S ribosomal protein L3 [Ignisphaera aggregans DSM 17230]
 gi|304377141|gb|ADM26980.1| LSU ribosomal protein L3P [Ignisphaera aggregans DSM 17230]
          Length = 340

 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/295 (35%), Positives = 155/295 (52%), Gaps = 32/295 (10%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           M+HRK   P+ GSLG  PRKRAS     VK++P+    KP  L  F+GYK GMTH++   
Sbjct: 1   MAHRKTHAPKRGSLGLRPRKRASEIIPTVKSWPEISLDKPLPL-GFIGYKVGMTHVIMID 59

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRG-LRSLCTVWAQHLNE-EVRRRF 118
           ++PGS    KE    VTIIETPP++ + +  Y K   G L+    +W +   E E+ RR 
Sbjct: 60  DRPGSPTEGKEIFMPVTIIETPPIIPIALRTYTKDSLGYLKVFTDIWIEPPKELEIWRRV 119

Query: 119 YKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVI-----------RKKAHLM 167
                         Y    + +   + I+  ++ +K+   ++           +K   + 
Sbjct: 120 ------------VTYNPTRDIEKRIEMIERNIDIIKRVSIIVATNPKNVGGLSKKVPDIA 167

Query: 168 EIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 227
           EI + G S+ ++  +AY    K I I+ VF   + IDIIGVTKGKG++GV+ R+GV  LP
Sbjct: 168 EIAIGGSSINERFKYAYEVLGKPIHINQVFNVGQFIDIIGVTKGKGFQGVIKRFGVKELP 227

Query: 228 R--KTHRGLRKVACIGAWHPARVSFT-VARAGQNGYHHRTEMNKKIYKLGKASQE 279
           R  K  +G R+   IG+  P   + +   +AGQ G+H RTE NK+I  +G   +E
Sbjct: 228 RWHKHRKGSRR---IGSRSPTIGAMSETPQAGQMGFHRRTEYNKRILAMGDKGEE 279


>gi|359416216|ref|ZP_09208568.1| 50S ribosomal protein L3P [Candidatus Haloredivivus sp. G17]
 gi|358033419|gb|EHK01972.1| 50S ribosomal protein L3P [Candidatus Haloredivivus sp. G17]
          Length = 323

 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 84/271 (30%), Positives = 136/271 (50%), Gaps = 10/271 (3%)

Query: 10  RHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHK 69
           R GSL + P+ RA R    +  +   D  KP     + GYK GMT ++R V+        
Sbjct: 8   RSGSLAYKPKVRADRIYPDINTWEDTDELKPL---GYAGYKVGMTRVLR-VDDTEGATKG 63

Query: 70  KETCEAVTIIETPPLVVVGVVGYVKTPR-GLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
           +E  + VTI+E PPL V G   Y + P  G +     W +  ++E++R         K+ 
Sbjct: 64  QEVADPVTILEAPPLRVYGARFYTEDPNSGEQVFTEAWTESPSKELQRAT----DIPKEG 119

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGFFE 188
                 K  +  +   D++  +        + +KK    E+ + GGSV + +++A     
Sbjct: 120 NLDNMEKAKDNSESLTDVKLLVHTQPSRAGLSKKKPANFELGL-GGSVEEILEYAEEMIG 178

Query: 189 KQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARV 248
           K+I    VF+  E  D++ VTKGKG EG V R+G+ +L  KT +  RK   +G WHP ++
Sbjct: 179 KEIEFSDVFEVGEYSDVVAVTKGKGVEGPVQRYGIKKLSHKTQKKRRKAGNVGPWHPDQL 238

Query: 249 SFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
           S+ +   GQ G+++RTE+NK+I   G+  +E
Sbjct: 239 SWRIPLPGQQGFNNRTEINKRILDFGEDPEE 269


>gi|218884488|ref|YP_002428870.1| 50S ribosomal protein L3P [Desulfurococcus kamchatkensis 1221n]
 gi|218766104|gb|ACL11503.1| 50S ribosomal protein L3P [Desulfurococcus kamchatkensis 1221n]
          Length = 396

 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/337 (31%), Positives = 162/337 (48%), Gaps = 62/337 (18%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDD------------------PSKPCR 42
           M HRK   PRHGSLG  PRKRA     +VK +P+                     ++P  
Sbjct: 1   MGHRKLHAPRHGSLGVRPRKRAEELTPRVKRWPEKSWFDILVERLGNEAASQGVVARPV- 59

Query: 43  LTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRG-LRS 101
           L  F  YKAGMTH +   ++P + +  KE    VTI++ PP+VV+GV  Y+    G L++
Sbjct: 60  LLGFPVYKAGMTHAIIVEDRPNTPVTGKEVFTPVTILDAPPIVVLGVRTYIIDEEGYLKT 119

Query: 102 LCTVW-------AQHLNE-------------EVRRRFYK-----NWCKSKKKAFTKYTKK 136
               W       A+   E             +V R++       N    K +  ++Y  K
Sbjct: 120 KGEAWRSPYDAIAKAFEELYAGIPLIGISVKDVVRKYLHGLRKVNHGLVKPEPSSEYGFK 179

Query: 137 YETDDGKKDIQAQLEKMKKYCTVI-----------RKKAHLMEIQVNGGSVAQKVDFAYG 185
           +  +  + +++  L        VI           +KK  ++E+++ GGS+ +++ +A G
Sbjct: 180 FVAESSESELRDALSGEIADVRVIASTIPVLSGIGKKKPEIIELKIGGGSIDERLKYAEG 239

Query: 186 FFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAW 243
                +    VF + + +D+IGVTKGKG++GVV R+GV  LPR  K  +G RK   IGA 
Sbjct: 240 ILGGYVRASDVFMEGQFVDVIGVTKGKGFQGVVKRFGVKELPRWHKHRKGSRK---IGAR 296

Query: 244 HPARVSFT-VARAGQNGYHHRTEMNKKIYKLGKASQE 279
            P   + +   +AGQ G+H RTE NK+I K+G    E
Sbjct: 297 SPGFGTMSEPPQAGQMGFHRRTEYNKRILKMGLNGLE 333


>gi|198138918|gb|ACH81777.1| ribosomal protein L3 [Artemia franciscana]
          Length = 194

 Score =  137 bits (346), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 67/108 (62%), Positives = 80/108 (74%), Gaps = 7/108 (6%)

Query: 200 DEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNG 259
           DE ID+IG TKGKGY+GV +RW   +LPRKTH+GLRKVACIGAWHP+RV FTVARAGQ G
Sbjct: 1   DENIDVIGTTKGKGYKGVTSRWHTRKLPRKTHKGLRKVACIGAWHPSRVKFTVARAGQKG 60

Query: 260 YHHRTEMNKKIYKLGKASQE------SHSAMTEFDRSVYLLSSLMGSF 301
           YHHRTEMNKKIY++G            ++A TE+D S   ++  MG F
Sbjct: 61  YHHRTEMNKKIYRIGAGIHTKDGKVIKNNASTEYDLSEKSITP-MGGF 107


>gi|407464763|ref|YP_006775645.1| 50S ribosomal protein L3P [Candidatus Nitrosopumilus sp. AR2]
 gi|407047951|gb|AFS82703.1| 50S ribosomal protein L3P [Candidatus Nitrosopumilus sp. AR2]
          Length = 331

 Score =  137 bits (344), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 80/280 (28%), Positives = 142/280 (50%), Gaps = 8/280 (2%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           M  RK   PR GSL + PR RA     +++A+P+   +   ++ A  G+KAG   IV   
Sbjct: 1   MGARKRHQPRRGSLAYSPRVRARSMEARIRAWPRLSATDEPKILAHCGFKAGCVQIVSID 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRF-Y 119
           ++       K+     T++ TPP++++G+ GY K   G  +   V+A+ + + + +    
Sbjct: 61  DRDKVPNAGKQLVSLGTVLVTPPVLILGIRGYSKDHDGKHAEFDVYAEDIPKSIAKEITI 120

Query: 120 KNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQK 179
           KN   S + A ++  K        K+I A +    +   +  KK ++ E  V+GG + ++
Sbjct: 121 KNTAGSVENAESRLRKI-------KEIYAIVAVSPRAAGLEMKKPYIFEAMVSGGDIEKQ 173

Query: 180 VDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVAC 239
                    K+I I+ +F+    +D+  +TKG G++GV+ RW V +   K+ + +R+V  
Sbjct: 174 FAHVKELLGKEIKIEQIFETGATVDVAAITKGHGWQGVMRRWNVKKKQHKSRKTVREVGS 233

Query: 240 IGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
           +G   P  V +TV RAGQ G+H R E +K+I  +G    +
Sbjct: 234 LGPISPQSVMYTVPRAGQTGFHQRVEYDKRIMIMGNTESD 273


>gi|118576052|ref|YP_875795.1| 50S ribosomal protein L3 [Cenarchaeum symbiosum A]
 gi|118194573|gb|ABK77491.1| ribosomal protein L3 [Cenarchaeum symbiosum A]
          Length = 328

 Score =  136 bits (343), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 141/280 (50%), Gaps = 10/280 (3%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           M HRKF  PR GSL + PR RA     +++ +P+    +P RL A  G+KAG   IV   
Sbjct: 1   MGHRKFSQPRRGSLAYSPRGRARSMEARIRGWPERQ-GEP-RLLAHAGFKAGCIQIVSID 58

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRF-Y 119
           ++  +    K+     T++ TPPL V+G+ GY K   G      V+A+ L  EV +    
Sbjct: 59  DREHTPNAGKQLVSLGTVLVTPPLHVLGMRGYSKGHYGRHVKFDVFAEDLPREVAKYIVL 118

Query: 120 KNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQK 179
           +N   + ++A T          G  +I   L    +   + +K+ ++ E  V GGS+ ++
Sbjct: 119 RNGRLNAERAETML-------GGTAEIYGILGVSPRSAGLEQKRPYIFEAPVRGGSMKER 171

Query: 180 VDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVAC 239
             +      K +    V +    +D+  +TKGKG++GV+ R G  R   K+ + +R++  
Sbjct: 172 FAYLKDLLGKTVKASDVLEPGAGVDVAAITKGKGWQGVIQRMGAKRKQHKSRKTVRELGS 231

Query: 240 IGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
           +G   P  V +TV RAGQ G+H R E NK+I  +G A ++
Sbjct: 232 LGPISPQNVMYTVPRAGQMGFHQRIEYNKRIMAVGSAGED 271


>gi|395756298|ref|XP_002834016.2| PREDICTED: 60S ribosomal protein L3-like, partial [Pongo abelii]
          Length = 164

 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 68/146 (46%), Positives = 96/146 (65%), Gaps = 6/146 (4%)

Query: 161 RKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTR 220
           +KKAH  E+  +     ++  +A G  EKQ    +   + E+ID+I VTKG+G +GV +R
Sbjct: 8   QKKAHTSEVHKSETPSQKENAWAQGRLEKQGTGHSEDSQSEVIDVIAVTKGRGVKGVTSR 67

Query: 221 WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           W   +LPRKTH+GLRKVACIGAWHPARV  ++ARAGQ GYHHRTE+NKKIY++G+     
Sbjct: 68  WHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGPHME 127

Query: 281 ------HSAMTEFDRSVYLLSSLMGS 300
                 ++A T +D +   ++ L+ S
Sbjct: 128 DGKLVKNNASTSYDVTAKAITLLVRS 153


>gi|397780844|ref|YP_006545317.1| 50S ribosomal protein L3P [Methanoculleus bourgensis MS2]
 gi|396939346|emb|CCJ36601.1| 50S ribosomal protein L3P [Methanoculleus bourgensis MS2]
          Length = 337

 Score =  134 bits (338), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 94/277 (33%), Positives = 133/277 (48%), Gaps = 4/277 (1%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K+  PR GSL + PRKRA        ++P+   +    +  F GYK GMTH+V   +   
Sbjct: 3   KYNRPRRGSLAYSPRKRAKSPVPGYGSWPEY--TGVPTVQGFAGYKVGMTHVVMVDDHKS 60

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
           S    K+    VT++E PP+ V GV  Y +   G  +L   W   L+EE+ RR       
Sbjct: 61  SPTEGKDVMVPVTVVEVPPMRVAGVRAYCEDTYGKHALTEAWTTDLDEELSRRITIPKNH 120

Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAY 184
               A     K        +       +      V +K   LME+++ GGS+  ++++A 
Sbjct: 121 DTVAALDAIRKAIGEGRVTELYAITYTQPDALTGVPKKVPDLMEMRIAGGSLDDQIEYAA 180

Query: 185 GFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRK--VACIGA 242
           G   K+I I   F+  E ID+  VT GKG EG V RWGV    RK  RG +K  +  +G 
Sbjct: 181 GILGKEIEITGNFEAGEYIDVTAVTTGKGTEGPVKRWGVQVRKRKHSRGGKKRHIGNLGP 240

Query: 243 WHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
           WHP  V + V + GQ GY  RTE NK+I K+G    +
Sbjct: 241 WHPHHVRWQVPQIGQMGYQQRTEFNKRILKIGTNGDD 277


>gi|395644916|ref|ZP_10432776.1| ribosomal protein L3 [Methanofollis liminatans DSM 4140]
 gi|395441656|gb|EJG06413.1| ribosomal protein L3 [Methanofollis liminatans DSM 4140]
          Length = 337

 Score =  134 bits (337), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 86/269 (31%), Positives = 132/269 (49%), Gaps = 6/269 (2%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSL + PRKRA     K +++P+    +P  L    GYK GMTH++   +   S   
Sbjct: 7   PRRGSLAYSPRKRAKSQVPKYQSWPEHK-GEPV-LQGIAGYKVGMTHVIMVDDHKSSPTE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
            +E    VT++E P + V  V  YV    G   L  VWA+ L+  + +R        ++ 
Sbjct: 65  GREIMVPVTVVEVPKMRVAAVRAYVTDSYGRHPLTEVWAEELDPLLAKRVTLPKEHDREA 124

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKA-HLMEIQVNGGSVAQKVDFAYGFF 187
              +  ++        DI A +       T + KK   LME +++G S+    D A    
Sbjct: 125 VLGEIRERLAAGQ-VSDIVALVYTQPAATTGVPKKVPELMETRIDGTSIEGCFDLATSLL 183

Query: 188 EKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRK--VACIGAWHP 245
            K+I   ++  + + +D+  +TKGKG +G V RWG+    RK  RG +K  +  +G W+P
Sbjct: 184 GKEIDPLSLVSEGQYVDVTAITKGKGTQGAVKRWGIQVRKRKHSRGGKKRHIGNLGPWNP 243

Query: 246 ARVSFTVARAGQNGYHHRTEMNKKIYKLG 274
             V + V + GQ GY  RTE NK+I K+G
Sbjct: 244 HHVRWQVPQMGQLGYQQRTEFNKRILKVG 272


>gi|224105031|ref|XP_002333867.1| predicted protein [Populus trichocarpa]
 gi|222838758|gb|EEE77109.1| predicted protein [Populus trichocarpa]
          Length = 152

 Score =  134 bits (337), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 62/77 (80%), Positives = 69/77 (89%)

Query: 223 VTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHS 282
           VTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKKIYKLGK  QESH 
Sbjct: 1   VTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKLGKCGQESHC 60

Query: 283 AMTEFDRSVYLLSSLMG 299
           A+TE+DR+   ++ + G
Sbjct: 61  AVTEYDRTEKDITPIGG 77


>gi|291333648|gb|ADD93339.1| ribosomal protein L3 [uncultured archaeon MedDCM-OCT-S11-C441]
          Length = 348

 Score =  134 bits (336), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 148/296 (50%), Gaps = 23/296 (7%)

Query: 14  LGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 73
           +G+ PRKR  R   ++ ++P+ + S+  R+  F G+KAGMTHI+     P S    +E  
Sbjct: 1   MGYGPRKRTVRQYPRITSWPETEASE-VRVQGFAGWKAGMTHILMRDTNPKSTSAGQEVR 59

Query: 74  EAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKY 133
           +AVT++E PP+ V+ V GY  TP G ++   VW     E     F +   +++ +   + 
Sbjct: 60  KAVTVVEAPPMTVLAVRGYRMTPYGKQTAGEVWTDVSEESPTNLFPRLANQTRGERDEEQ 119

Query: 134 TKKYETDDGK------KDIQAQLEKMKK---------YCT-------VIRKKAHLMEIQV 171
            +K     G+      K ++     +++          CT       V  K   +ME+ +
Sbjct: 120 GRKPAKRGGRIPKRPSKPLEEAANSLRQQDLSEVRLIVCTQPESVRSVPSKTPEIMEMGL 179

Query: 172 NGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 231
            GG +  K+++A      +I I+ V+   + +D++GVTKGKG++G + R+G+  L  K  
Sbjct: 180 TGGDIEAKLEWALERLGGEIGIEDVYDVGQEVDVVGVTKGKGWQGSIKRFGLKLLSHKNS 239

Query: 232 RGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEF 287
           +  R+   +G +    V  T+ +AGQ GYH RTE+NKKI ++    +   +    F
Sbjct: 240 KRRRQGGNMGDFGTGYVRKTIRQAGQVGYHKRTELNKKILRISNPEESEITPAGGF 295


>gi|296242583|ref|YP_003650070.1| 50S ribosomal protein L3P [Thermosphaera aggregans DSM 11486]
 gi|296095167|gb|ADG91118.1| LSU ribosomal protein L3P [Thermosphaera aggregans DSM 11486]
          Length = 395

 Score =  134 bits (336), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 105/341 (30%), Positives = 154/341 (45%), Gaps = 80/341 (23%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFP-------------KDDP-----SKPCR 42
           M HRK   PR GSLG  PRKRA     +V+ +P             KD       SKP  
Sbjct: 1   MGHRKLHAPRRGSLGVRPRKRAEELTPRVRTWPAKTWAELLLEKYGKDAEKHGVVSKPV- 59

Query: 43  LTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGY-VKTPRGLRS 101
           L  F  YKAGMTH +   ++P +    KE    VTI++ PP+V++G+  Y V    GL S
Sbjct: 60  LLGFAAYKAGMTHALMVEDRPNTPFTGKEVFTPVTILDAPPMVILGLRAYSVGEQGGLVS 119

Query: 102 LCTVWAQHLN--------------------EEVRRRFYK--------------------- 120
           L   W   +                     + V R++ +                     
Sbjct: 120 LGEAWRSPVEAVGKAYEEYYSKNPLLTERVDSVVRKYLQGLRKLNHGLVKPDPTGKYGFK 179

Query: 121 ----NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSV 176
               NW ++ KK FT             +++A    +       +KK  ++EI++ GG V
Sbjct: 180 FVETNWEEAFKKVFTGNVV---------EVRALASTIPVLSGFAKKKPEIVEIKIGGGKV 230

Query: 177 AQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGL 234
            + V +        + +  VF + + ID+IGVTKGKG++GVV R+GV  LPR  K  +G 
Sbjct: 231 EEIVKYGESVLGGLVTVRDVFTEGQFIDVIGVTKGKGFQGVVKRFGVKVLPRWHKHRKGA 290

Query: 235 RKVACIGAWHPARVSFT-VARAGQNGYHHRTEMNKKIYKLG 274
           RK   IG+  PA  + +   +AGQ G+H RT+ NK+I ++G
Sbjct: 291 RK---IGSRSPAFGTMSEPPQAGQTGFHRRTDYNKRILRIG 328


>gi|15790632|ref|NP_280456.1| 50S ribosomal protein L3P [Halobacterium sp. NRC-1]
 gi|169236371|ref|YP_001689571.1| 50S ribosomal protein L3P [Halobacterium salinarum R1]
 gi|42559695|sp|Q9HPD4.3|RL3_HALSA RecName: Full=50S ribosomal protein L3P
 gi|226725182|sp|B0R656.1|RL3_HALS3 RecName: Full=50S ribosomal protein L3P
 gi|10581159|gb|AAG19936.1| 50S ribosomal protein L13P [Halobacterium sp. NRC-1]
 gi|167727437|emb|CAP14225.1| 50S ribosomal protein L3 [Halobacterium salinarum R1]
          Length = 335

 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/277 (34%), Positives = 140/277 (50%), Gaps = 11/277 (3%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GS+GF PRKRA     +  ++P DD      L  F GYKAGMTH+V   +K  +   
Sbjct: 7   PRKGSMGFSPRKRAESEVPRFNSWPADDGE--VGLQGFAGYKAGMTHVVLVDDKANAPTE 64

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             ET   VT++ETPP+    V  Y  TP G + L  VWA   +E + R         +  
Sbjct: 65  GMETTVPVTVVETPPMRAAAVRLYEDTPYGKKPLTEVWADDTHESLDRTLS---VPDEGG 121

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMK-KYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGFF 187
              +  +  +T++   DI+     +      V +K   +ME +V GG++A +++FA    
Sbjct: 122 DTDELIEALDTEE-IADIRVITHTVPGDTAGVPKKNPDVMETRVGGGTLADRLEFAADLI 180

Query: 188 EKQI--PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAW 243
           E         VF+  E  D  G+TKGKG +G V RWGV +   K  R    R++  +G W
Sbjct: 181 EDGGVHAFGDVFRAGEFTDAAGITKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW 240

Query: 244 HPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 280
           +P+RV  TV + GQ GYH RTE+NK++  +    + +
Sbjct: 241 NPSRVRSTVPQQGQTGYHQRTELNKRLIDINDGDEPT 277


>gi|239789793|dbj|BAH71497.1| ACYPI009439 [Acyrthosiphon pisum]
          Length = 193

 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 64/106 (60%), Positives = 79/106 (74%), Gaps = 7/106 (6%)

Query: 202 MIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYH 261
           MID IGVTKG+GY+GV +RW   +LPRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYH
Sbjct: 1   MIDCIGVTKGRGYKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYH 60

Query: 262 HRTEMNKKIYKLGKASQE------SHSAMTEFDRSVYLLSSLMGSF 301
           HRTE+NKKIY++G            ++A TE+D +   ++  MG F
Sbjct: 61  HRTEINKKIYRIGLGIHTKDGKVIKNNASTEYDLTEKTITP-MGGF 105


>gi|294919384|ref|XP_002778527.1| ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
 gi|239887018|gb|EER10322.1| ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
          Length = 178

 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 64/100 (64%), Positives = 72/100 (72%)

Query: 202 MIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYH 261
           M+DIIGVTKG G   V TRWGVTRL RKTHRGLRKVACIGAWHPARV F V RAGQ GYH
Sbjct: 1   MVDIIGVTKGHGNTSVTTRWGVTRLARKTHRGLRKVACIGAWHPARVQFQVPRAGQMGYH 60

Query: 262 HRTEMNKKIYKLGKASQESHSAMTEFDRSVYLLSSLMGSF 301
           HR E+NKKIY++GKA +E  +     +       + MG F
Sbjct: 61  HRVEINKKIYRIGKALREDPNNAAGSNDLTQKAITPMGGF 100


>gi|126178514|ref|YP_001046479.1| 50S ribosomal protein L3P [Methanoculleus marisnigri JR1]
 gi|166233158|sp|A3CSZ7.1|RL3_METMJ RecName: Full=50S ribosomal protein L3P
 gi|125861308|gb|ABN56497.1| LSU ribosomal protein L3P [Methanoculleus marisnigri JR1]
          Length = 337

 Score =  131 bits (329), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 97/279 (34%), Positives = 137/279 (49%), Gaps = 8/279 (2%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   PR GSL + PRKRA     +  ++P+     P  +  F GYK GMTH++   +   
Sbjct: 3   KINRPRRGSLAYSPRKRAKSPVPRYGSWPEYT-GAPA-VQGFAGYKVGMTHVIMVDDHKS 60

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
           S    K+    VT++E PP+ V GV  Y +   G  +L   W   L+EE+ RR   N  K
Sbjct: 61  SPTEGKDVMVPVTVVEVPPMRVAGVRAYGEDTYGKHALTEAWTTDLDEELSRRI--NVPK 118

Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMK--KYCTVIRKKAHLMEIQVNGGSVAQKVDF 182
           +   A      K    +GK      L   +  +   V +K   LME+++ GGS+  ++ +
Sbjct: 119 NHDTAAALEAVKAAVGEGKVSELYALAYTRPMELTGVPKKVPDLMEMRIAGGSLEDQIAY 178

Query: 183 AYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRK--VACI 240
           A     K+I I    +  E +D+  VT GKG EG V RWGV    RK  RG +K  +  +
Sbjct: 179 AAEILGKEITISGNLEVGEYVDVTAVTTGKGTEGPVKRWGVQVRKRKHSRGGKKRHIGNL 238

Query: 241 GAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
           G WHP  V + V + GQ GY  RTE NK+I K+G    E
Sbjct: 239 GPWHPHHVRWQVPQMGQMGYQQRTEFNKRILKIGADGDE 277


>gi|414587229|tpg|DAA37800.1| TPA: hypothetical protein ZEAMMB73_342493 [Zea mays]
          Length = 78

 Score =  130 bits (328), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 59/67 (88%), Positives = 64/67 (95%)

Query: 1  MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
          MSHRKFEHPRHGSLGFLPRKR+SRHRGKVK+FP+DDP KPC LTAFLGYKAGMTHIVR+V
Sbjct: 1  MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPRDDPKKPCHLTAFLGYKAGMTHIVREV 60

Query: 61 EKPGSKL 67
          EKPGS +
Sbjct: 61 EKPGSSM 67


>gi|110456408|gb|ABG74707.1| putative ribosomal protein L3e, partial [Diaphorina citri]
          Length = 201

 Score =  130 bits (328), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 63/106 (59%), Positives = 79/106 (74%), Gaps = 7/106 (6%)

Query: 202 MIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYH 261
           MID IGVTKGKG++GV +RW   +LPRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYH
Sbjct: 1   MIDCIGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYH 60

Query: 262 HRTEMNKKIYKLGKASQE------SHSAMTEFDRSVYLLSSLMGSF 301
           HRTE+NKKIY++G            ++A T++D +   ++  MG F
Sbjct: 61  HRTELNKKIYRMGAGIHTKDGKVIKNNASTDYDLTEKSITP-MGGF 105


>gi|124028157|ref|YP_001013477.1| 50S ribosomal protein L3P [Hyperthermus butylicus DSM 5456]
 gi|123978851|gb|ABM81132.1| 50S ribosomal protein L3P [Hyperthermus butylicus DSM 5456]
          Length = 319

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/288 (34%), Positives = 148/288 (51%), Gaps = 21/288 (7%)

Query: 29  VKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVG 88
           +K++P+     P  L AFL YK GMTH+    ++PGS  H +E    VT++E PP+VV  
Sbjct: 1   MKSWPEVQSENPLPL-AFLAYKVGMTHVYVIDDEPGSITHGREIFMPVTVLEAPPMVVTA 59

Query: 89  VVGYVKTPR-GLRSLCTVWAQH--LNEEVRRRFYKNWCKSKKKAFTKYTKKYE-TDDGKK 144
           V  Y   P  GL +L   WAQ   L E+     Y+   + +     K  KK E   D   
Sbjct: 60  VRVYGYDPNIGLYTLSEAWAQPETLVEKYNLDIYRVVPRLRFPDPDKAVKKLEGLLDKVY 119

Query: 145 DIQAQLEKMKKYCTVI-RKKAHLMEIQVNGGS-VAQKVDFAYGFFEKQIPIDAVFQKDEM 202
           D++       +    + +KK  L+EI++ GGS +  + ++A      ++ +  VF++ + 
Sbjct: 120 DVRIIAATQPRLVGGLSKKKPDLLEIKIGGGSSIEDRFNYAVKLLGSELKVSDVFREGQF 179

Query: 203 IDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSFT---VARAGQ 257
           +D+I VTKGKG++GV+ R+GV  LPR  K  +G R  +  G   PA  SF+   V + GQ
Sbjct: 180 VDVIAVTKGKGFQGVIKRFGVKELPRWHKHRKGSR--SGPGTRGPA-TSFSWSEVPQPGQ 236

Query: 258 NGYHHRTEMNKKIYKLGKASQESHSAMTEFD----RSVYLLSSLMGSF 301
            G+H RTE NK+I K+G    E   A         RS Y+L  L GS 
Sbjct: 237 MGFHRRTEYNKRILKIGDNGLEITPAGGFLHYGIVRSTYIL--LAGSI 282


>gi|431890863|gb|ELK01742.1| 60S ribosomal protein L3 [Pteropus alecto]
          Length = 303

 Score =  127 bits (320), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 73/165 (44%), Positives = 94/165 (56%), Gaps = 34/165 (20%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MSH KF  PR  S   L R  A+R+ GKVK+FPKDD SK   LTA LGYKAG+T+IV++V
Sbjct: 1   MSHSKFSTPRKFSASHL-RNAAARNHGKVKSFPKDDLSKTVHLTALLGYKAGVTYIVQEV 59

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
             PGSK ++KE  E VTI+ETP +V+VG+                               
Sbjct: 60  NSPGSKENEKEVVETVTIVETPSMVIVGI------------------------------- 88

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAH 165
              +SKKKA T+Y KK++ +DGK+ ++     MKKYC VIR   H
Sbjct: 89  --HRSKKKALTQYCKKWQDNDGKRQLEKGFNSMKKYCQVIRIIIH 131



 Score = 45.1 bits (105), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 22/39 (56%), Positives = 29/39 (74%), Gaps = 1/39 (2%)

Query: 238 ACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA 276
           A + AWHPA+V+F+VA AG  GY  RTE+N KI K+G+ 
Sbjct: 144 AHLRAWHPAQVAFSVAWAGWKGYRRRTEIN-KICKIGQG 181


>gi|268323275|emb|CBH36863.1| 50S ribosomal protein L3P [uncultured archaeon]
          Length = 315

 Score =  127 bits (319), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 93/277 (33%), Positives = 127/277 (45%), Gaps = 26/277 (9%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K   PR GSL F PRKRA   R ++    ++       +  F GYKAGMTHI+       
Sbjct: 3   KRHRPRRGSLAFTPRKRA---RSEICRIKRETIVDGGNIQGFAGYKAGMTHIILTDNVSH 59

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
           S     E    VT+IETPP+ V G   Y  T             H  ++     Y +  K
Sbjct: 60  SMTKGMEIAIPVTVIETPPMRVEGFRLYKST-------------HYGKQTVTEAYNDLSK 106

Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAY 184
                  +  K   T    + I + L K      V +KK  +ME Q+ GG + + + +A 
Sbjct: 107 -----IEELIKSNSTGLELRMISSTLPKA--VNGVPKKKQEVMETQM-GGEIGKDLKYAK 158

Query: 185 GFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGA 242
               K+I    +F + + +D   VTKGKG +G V RWG+T    K  R    R V  IG 
Sbjct: 159 EMLGKEISAKDIFNEGDFVDATAVTKGKGTQGPVKRWGITIQNAKARRSGKGRHVGAIGG 218

Query: 243 WHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
           W P RV + V + GQ GY  RTE NK+I K+G+  +E
Sbjct: 219 WTPRRVRWRVPQLGQTGYQQRTEYNKRILKIGENGEE 255


>gi|302348734|ref|YP_003816372.1| 50S ribosomal protein L3P [Acidilobus saccharovorans 345-15]
 gi|302329146|gb|ADL19341.1| 50S ribosomal protein L3P [Acidilobus saccharovorans 345-15]
          Length = 329

 Score =  127 bits (319), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 93/273 (34%), Positives = 136/273 (49%), Gaps = 31/273 (11%)

Query: 17  LPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAV 76
           +PRKR+S     V ++P+    KP  L  F+GYKAGMTH      + GS    KE    +
Sbjct: 1   MPRKRSSEFVPSVSSWPEVSAQKPT-LLGFIGYKAGMTHAFIVDNRQGSPTFGKEVFRPI 59

Query: 77  TIIETPPLVVVGVVGY-VKTPRGLRSLCTVWAQH-LNEEVRRRFYKNWCKSKKKAFTKYT 134
           T++E PP+ V+ V GY     RGL ++   WA+  L+ E+ RR       S   AF    
Sbjct: 60  TVLEAPPIFVLAVRGYGYDENRGLYTVGEAWARPPLDLELERRI------SAIGAF---- 109

Query: 135 KKYETDDGKKDIQAQLEKMKKYCTVI-----------RKKAHLMEIQVN--GGSVAQKVD 181
              +T    K ++A L  +K+   ++           +K   L+E++V   G  V    D
Sbjct: 110 ---DTQSMLKKLEASLSDIKEVRVLVATQPKLTGGLSKKSPDLLEVKVASPGSDVKAAFD 166

Query: 182 FAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIG 241
           +A     K + +  VFQ   M+D+I VTKGKG++G V R+GV  LPR  H+  +K   IG
Sbjct: 167 YATSILGKTLSVGEVFQPGLMVDVIAVTKGKGFQGDVKRFGVKVLPR-WHKHRKKARGIG 225

Query: 242 A-WHPARVSFTVARAGQNGYHHRTEMNKKIYKL 273
           A  H     + +   GQ G+H RTE NK+I  +
Sbjct: 226 ARSHGKGTWWEIPNPGQLGFHRRTEYNKRILDI 258


>gi|13541155|ref|NP_110843.1| 50S ribosomal protein L3P [Thermoplasma volcanium GSS1]
 gi|42559678|sp|Q97BX7.1|RL3_THEVO RecName: Full=50S ribosomal protein L3P
 gi|14324543|dbj|BAB59470.1| ribosomal protein large subunit L3 [Thermoplasma volcanium GSS1]
          Length = 331

 Score =  127 bits (318), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 137/274 (50%), Gaps = 15/274 (5%)

Query: 8   HPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKL 67
           H R GS+ + PR RA     +++++P  + S P ++  F G+K GMTH+     +  S  
Sbjct: 6   HSRRGSMAYYPRVRAKSIEPRIRSWP--EISGPVKVQGFAGFKVGMTHVEMVDYRKTSVT 63

Query: 68  HKKETCEAVTIIETPPLVVVGVVGYVKTPRG-LRSLCTVWAQHLNEEVRRRFYKNWCKSK 126
             +     VT+IE PPL V+G+  Y +   G +  +   W Q+L++E+           K
Sbjct: 64  AGQPIFVPVTVIEVPPLDVIGIRLYDEDEEGNMVVVYEKWTQNLDKEL----------FK 113

Query: 127 KKAFTKYTKKYETDDGKKDIQAQLE-KMKKYCTVIRKKAHLMEIQVNGG-SVAQKVDFAY 184
           K    K  K+    +   D++  +  + K    +  KK  + E+++ GG SV ++ ++A 
Sbjct: 114 KITTFKEVKEKPVPETYADVRLIVATRNKDVPGIPSKKPEIFELRIGGGNSVKERFEYAT 173

Query: 185 GFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWH 244
               K I  +   +  + +D++ VTKGKG+ G V R+GV  LPRK  +  R +  +G WH
Sbjct: 174 AHLGKTIRFEDFSKPGKFVDVLSVTKGKGFTGHVQRFGVKLLPRKNRKHRRMIGTLGPWH 233

Query: 245 PARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ 278
           P  V  TV +AGQ GY  RT  N ++ K  K   
Sbjct: 234 PDWVRNTVPQAGQMGYQQRTISNVRVLKYSKGED 267


>gi|374724264|gb|EHR76344.1| Ribosomal protein L3 [uncultured marine group II euryarchaeote]
          Length = 336

 Score =  124 bits (312), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 90/287 (31%), Positives = 144/287 (50%), Gaps = 23/287 (8%)

Query: 5   KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
           K  HPR GS+ F PRKRA+R  G VK++P  D S+  R+  F G+KAGMTH++     P 
Sbjct: 3   KKSHPRRGSMAFSPRKRANRPFGHVKSWPTTDASE-VRMQGFAGWKAGMTHVLSRDLNPR 61

Query: 65  SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLN-EEVRRRFYKNWC 123
           S    +E    VT++E P + ++GV GY  TP G ++    WA      E     +K   
Sbjct: 62  SPSAGQEVRIPVTVVECPKMRILGVRGYAMTPYGKQAAGEAWADAAKIAEAFEDLFKRLP 121

Query: 124 KSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCT--------VIRKKAHLMEIQVNGGS 175
             K+    K+ +          + A L +++  C         +  K   +ME+ ++GG+
Sbjct: 122 VRKEHDAEKHFENL--------MNADLVEVRLICATQPHSVSGIPTKVPSVMEVGLDGGN 173

Query: 176 VAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLR 235
           +  ++++A    EK     +      + DI+ +TKG G++GV+ R+G      K  +  R
Sbjct: 174 IGDQLNYAK---EKLGEEYSXXXXXXLTDIVAITKGYGWQGVIKRFGGKLQSHKNSKKRR 230

Query: 236 KVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHS 282
           +   +GA+    V  ++ + GQ GYH RTE NK+I ++  AS E HS
Sbjct: 231 QHGNMGAFGDGYVRKSIRQGGQTGYHQRTEYNKRIMRI--ASTEDHS 275


>gi|424812829|ref|ZP_18238069.1| ribosomal protein L3 [Candidatus Nanosalinarum sp. J07AB56]
 gi|339757051|gb|EGQ40634.1| ribosomal protein L3 [Candidatus Nanosalinarum sp. J07AB56]
          Length = 323

 Score =  123 bits (309), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 127/279 (45%), Gaps = 20/279 (7%)

Query: 9   PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
           PR GSLG+ P+ RA R    +  +P+     P     F  YKAGMT ++  V+       
Sbjct: 7   PRSGSLGYKPKVRADRVYPDIDNWPEAGEPTPLD---FPAYKAGMTRVLH-VDDTEGATQ 62

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPR-GLRSLCTVWAQHLNEEVRRRFYKNWCKSKK 127
            +E    VT++E PP  V G   Y   P  G + +   W +  + E++R          K
Sbjct: 63  GQEVATPVTVLEAPPARVYGARFYTYDPNHGKQVMTEAWTESPSPELQRA-----TDIPK 117

Query: 128 KAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVN-----GGSVAQKVDF 182
                  ++ + + G+ D    L   +   T      H   +  N     GG   Q+++ 
Sbjct: 118 NGNLDNIEEAKEETGEIDEVRLLVHTQPQMT-----GHGHPVPANFETGLGGDTEQQLEA 172

Query: 183 AYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA 242
           A      QI    V  + +  D + VTKGKG EG V R GVT+L  KT +  RK   +G 
Sbjct: 173 AENLIGTQISPQDVLDEGQYTDAVAVTKGKGMEGPVKRHGVTKLGHKTQKKRRKAGNVGP 232

Query: 243 WHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESH 281
           WHP  +S+ +   GQ G+H+RTE+NK+I+ +G   + + 
Sbjct: 233 WHPDTLSWKIPLPGQEGFHNRTEINKRIFDIGDNPERAQ 271


>gi|385805567|ref|YP_005841965.1| 50S ribosomal protein L3P [Fervidicoccus fontis Kam940]
 gi|383795430|gb|AFH42513.1| 50S ribosomal protein L3P [Fervidicoccus fontis Kam940]
          Length = 347

 Score =  123 bits (309), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 90/299 (30%), Positives = 146/299 (48%), Gaps = 17/299 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           M HRK   PR G+LG  PR+R      +V+ +P  +  K   L  F+GYK GMTH +   
Sbjct: 1   MGHRKKSAPRRGTLGVRPRQRFEGIVPRVRTWPVLEEKKIFPL-GFIGYKVGMTHALVVD 59

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGY-VKTPRGLRSLCTVWA-----QHLN-EE 113
           ++  S    K+    VT++ETPP+++ G+ GY      G + L   WA     ++ N E 
Sbjct: 60  DRKTSITFGKQIFTPVTLLETPPMILAGIRGYSFDINEGKQPLTEAWATGDTLKNTNIER 119

Query: 114 VRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVI-RKKAHLMEIQVN 172
           + + F  N  + K +   K   +        +++A L         I +KK  L+E+ ++
Sbjct: 120 LIKSFSPNSTQQKLEELEKSLSEMA------ELRALLLSQPTLAGGISKKKPELIEVGLS 173

Query: 173 GGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR 232
           G  +  +  +A     K I I  +F   + +DII VTKGKG++G V R+G+  LPR  H+
Sbjct: 174 GKDLKAQFSYAVEKLGKTIKISEIFNPGKFVDIIAVTKGKGFQGPVKRFGIKVLPR-WHK 232

Query: 233 GLRKVACIGAWHPARVSFTVA-RAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRS 290
             +    IGA  P   + + A +AGQ G+H R + NK+I  +     +    + + + S
Sbjct: 233 HRKAARKIGARGPGMGALSTAPQAGQMGFHQRVDYNKRILYIADTEGKDKELLAKINPS 291


>gi|297832722|ref|XP_002884243.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330083|gb|EFH60502.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 78

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 59/76 (77%), Positives = 66/76 (86%), Gaps = 3/76 (3%)

Query: 46  FLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTV 105
           FLGYKAGMTHIVR+V KPGS+ HK+ETCEAVT+IETPP+V   VVGYVK P GL +  TV
Sbjct: 6   FLGYKAGMTHIVREVVKPGSQHHKEETCEAVTMIETPPMV---VVGYVKIPDGLSTRSTV 62

Query: 106 WAQHLNEEVRRRFYKN 121
           WAQHL+EEVRRRFYKN
Sbjct: 63  WAQHLSEEVRRRFYKN 78


>gi|84998982|ref|XP_954212.1| 60S ribosomal protein l3 [Theileria annulata]
 gi|65305210|emb|CAI73535.1| 60S ribosomal protein l3, putative [Theileria annulata]
          Length = 173

 Score =  122 bits (305), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 60/100 (60%), Positives = 76/100 (76%), Gaps = 2/100 (2%)

Query: 202 MIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYH 261
           M+D++GVTKG G +GVV+R+GVTRLPRKTHRGLRKVACIG+WHPARV F V R GQ GYH
Sbjct: 1   MLDVLGVTKGHGVKGVVSRYGVTRLPRKTHRGLRKVACIGSWHPARVQFQVPRHGQKGYH 60

Query: 262 HRTEMNKKIYKLGKASQESHSAMTEFDRSVYLLSSLMGSF 301
            RTE NKKIY++G  +   + + T+ D +   ++  MG F
Sbjct: 61  KRTERNKKIYRIGLGNCNRNGS-TDSDLTEKTITP-MGGF 98


>gi|70909597|emb|CAJ17224.1| ribosomal protein L3e [Micromalthus debilis]
          Length = 178

 Score =  117 bits (293), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 57/96 (59%), Positives = 71/96 (73%), Gaps = 7/96 (7%)

Query: 212 KGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIY 271
           KGY+GV +RW   +LPRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTE+NKKIY
Sbjct: 1   KGYKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEVNKKIY 60

Query: 272 KLGKASQE------SHSAMTEFDRSVYLLSSLMGSF 301
           ++G            ++A TE+D +   ++  MG F
Sbjct: 61  RIGAGIHTKDGKVIKNNASTEYDLTEKSITP-MGGF 95


>gi|309266996|ref|XP_001476854.2| PREDICTED: 60S ribosomal protein L3-like, partial [Mus musculus]
          Length = 180

 Score =  117 bits (292), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 58/96 (60%), Positives = 74/96 (77%), Gaps = 6/96 (6%)

Query: 210 KGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK 269
           KGKGY+GV +RW   +LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYH+RTE+NKK
Sbjct: 1   KGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHYRTEINKK 60

Query: 270 IYKL--GKASQES----HSAMTEFDRSVYLLSSLMG 299
           IYK+  G   ++     ++A T++D S   ++ L G
Sbjct: 61  IYKICQGHLIKDGKLIKNNASTDYDLSDKSINPLGG 96


>gi|291391876|ref|XP_002712286.1| PREDICTED: ribosomal protein L3-like [Oryctolagus cuniculus]
          Length = 188

 Score =  116 bits (291), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 53/75 (70%), Positives = 63/75 (84%)

Query: 202 MIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYH 261
           MI++ GVTKGKGY+GV +RW   +LPRKTHRGL KVACIGAWH AR +F+VA A Q GYH
Sbjct: 1   MINVTGVTKGKGYKGVTSRWHTKKLPRKTHRGLPKVACIGAWHLARKAFSVAWARQKGYH 60

Query: 262 HRTEMNKKIYKLGKA 276
           HRTE+NKKIYK+G+ 
Sbjct: 61  HRTEINKKIYKIGQG 75


>gi|374633068|ref|ZP_09705435.1| archaeal ribosomal protein L3 [Metallosphaera yellowstonensis MK1]
 gi|373524552|gb|EHP69429.1| archaeal ribosomal protein L3 [Metallosphaera yellowstonensis MK1]
          Length = 299

 Score =  116 bits (291), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/238 (32%), Positives = 124/238 (52%), Gaps = 15/238 (6%)

Query: 45  AFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRS-LC 103
            F+GYK GMTH+    E   S  + KE    VT++ETPPL V+ +  Y    +G  S + 
Sbjct: 2   GFVGYKVGMTHVFMVDENKSSSTYGKEIYVPVTVLETPPLNVLAIRAYGLDSKGEHSVIA 61

Query: 104 TVWAQ---HLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYC--T 158
             W      LN  ++RR      K   +      +K ++          L   + Y   +
Sbjct: 62  EAWGDLGSQLNY-IQRRI--KTLKLSNEKLAPALEKIKSSIESVSFLRLLISTQPYLIPS 118

Query: 159 VIRKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVV 218
           + +K   ++E+Q+ GG +  ++ +A     K + +  VF++ +++DIIGVTKG G++GV+
Sbjct: 119 LGKKTPDIVEVQIGGGDLKSQLQYAEKILGKTLSVTDVFKEGQLVDIIGVTKGHGFQGVI 178

Query: 219 TRWGVTRLPR--KTHRGLRKVACIGAWHPARVSFT-VARAGQNGYHHRTEMNKKIYKL 273
            R+GV  LPR  K  +G RKV   G   P+  + + V + GQ GYH RTE NK+I+K+
Sbjct: 179 KRYGVQELPRWHKHRKGSRKVGTKG---PSLGTPSYVPQPGQTGYHRRTEYNKRIFKI 233


>gi|324516200|gb|ADY46457.1| 60S ribosomal protein L3 [Ascaris suum]
          Length = 204

 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 57/98 (58%), Positives = 71/98 (72%), Gaps = 14/98 (14%)

Query: 153 MKKYCTVIR--------------KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQ 198
           MKKYC+ IR              KKAH+MEIQVNGG+V +KVD+A    EKQ+ +D+VF 
Sbjct: 1   MKKYCSKIRVIAHTQMKVMKHREKKAHIMEIQVNGGTVPEKVDWAKEHLEKQVAVDSVFA 60

Query: 199 KDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRK 236
           +DEMID IGVTKGKG++GV +RW   +LPRKTH+GLRK
Sbjct: 61  QDEMIDCIGVTKGKGFKGVTSRWHTKKLPRKTHKGLRK 98


>gi|226475920|emb|CAX72050.1| ribosomal protein L3 [Schistosoma japonicum]
          Length = 202

 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 57/102 (55%), Positives = 73/102 (71%), Gaps = 4/102 (3%)

Query: 206 IGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE 265
           I VTKGKG++GV +RW   +LPRKTH+GLRKVACIGAWHPARV+ +VARAGQ GY HRTE
Sbjct: 3   IDVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVARSVARAGQKGYFHRTE 62

Query: 266 MNKKIYKLGKASQE----SHSAMTEFDRSVYLLSSLMGSFSS 303
           +NKKIY++G   Q     + +   + DR   +L    G+ S+
Sbjct: 63  LNKKIYRIGMGLQAQLEVAKAEAAKDDRDKNVLPKPKGNAST 104


>gi|432111882|gb|ELK34924.1| 60S ribosomal protein L3 [Myotis davidii]
          Length = 231

 Score =  114 bits (286), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 60/116 (51%), Positives = 74/116 (63%), Gaps = 30/116 (25%)

Query: 161 RKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTR 220
           +KK HLMEIQ                             DEMID+IGVTKGKGY+GV +R
Sbjct: 33  QKKVHLMEIQ-----------------------------DEMIDLIGVTKGKGYKGVTSR 63

Query: 221 WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA 276
           W   +LP KTHRG +KVACI AWHPA+V+F+VA+AGQ GYH  TE+N KIY++G+ 
Sbjct: 64  WHTKKLPHKTHRGPQKVACIQAWHPAQVAFSVAQAGQKGYHPHTEIN-KIYRIGQG 118


>gi|67594773|ref|XP_665876.1| hypothetical protein [Cryptosporidium hominis TU502]
 gi|54656732|gb|EAL35645.1| hypothetical protein Chro.50226 [Cryptosporidium hominis]
          Length = 74

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 54/65 (83%), Positives = 58/65 (89%)

Query: 1  MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
          MSHRKFE PR GSLGFLPRKR SR RGKVKAFPKDD ++P  LTAF+GYKAGMTHIVRDV
Sbjct: 1  MSHRKFERPRSGSLGFLPRKRCSRSRGKVKAFPKDDSNQPPHLTAFMGYKAGMTHIVRDV 60

Query: 61 EKPGS 65
          +KPGS
Sbjct: 61 DKPGS 65


>gi|255513436|gb|EET89702.1| ribosomal protein L3 [Candidatus Micrarchaeum acidiphilum ARMAN-2]
          Length = 322

 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/270 (32%), Positives = 133/270 (49%), Gaps = 13/270 (4%)

Query: 12  GSLGFLPRKRASRHRGKVKAFPKDDPSK-PCRLTAFLGYKAGMTHI--VRDVEKPGSKLH 68
           GSL +  R+RA R   +V+  P  +P K P  L+  + +KAGMT +  + D E P   + 
Sbjct: 3   GSLQYWHRRRAQRRLPRVRNVP--NPEKDPVSLSNIVAFKAGMTSLSYIDDSESPSKGM- 59

Query: 69  KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
             E     TI+E P     G+  Y   P      CT  A+  N+ +  +      K+ + 
Sbjct: 60  --EVLRGCTILEVPKTEAYGIRLYSVDPTTKYLKCT--AEIYNKAIANKIGIKEIKTDES 115

Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGFFE 188
             +K+  K    D K+ I   L       +  +      E  V GG+  Q+ DFA     
Sbjct: 116 KISKF--KERLSDFKR-IGVLLVAHADTISAEQNHPTKYESTVTGGNAEQRFDFAAQLVG 172

Query: 189 KQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARV 248
           K++    VF+  E ID++ VTKGKG+ GV+ R GV RL  K  + +R +  +GA+ P ++
Sbjct: 173 KEVKPADVFKGGEFIDVVSVTKGKGWAGVIKRHGVRRLDHKATQKIRHIGALGAFTPGKI 232

Query: 249 SFTVARAGQNGYHHRTEMNKKIYKLGKASQ 278
            +TV R GQ G+++RTE NK+I  LG AS 
Sbjct: 233 MYTVPRPGQLGFNYRTEHNKRILVLGAASD 262


>gi|380481419|emb|CCF41852.1| 60S ribosomal protein L3, partial [Colletotrichum higginsianum]
          Length = 83

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 51/72 (70%), Positives = 62/72 (86%)

Query: 12 GSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKE 71
          GSL +LPRKRA+RHRGKVK+FPKDD  KP  LTA +GYKAGMT IVRD+++PG+K +KKE
Sbjct: 12 GSLAYLPRKRAARHRGKVKSFPKDDAKKPVHLTAAMGYKAGMTTIVRDLDRPGAKANKKE 71

Query: 72 TCEAVTIIETPP 83
            EAV+II+TPP
Sbjct: 72 VVEAVSIIDTPP 83


>gi|390370692|ref|XP_003731872.1| PREDICTED: 60S ribosomal protein L3-like, partial
          [Strongylocentrotus purpuratus]
          Length = 64

 Score =  112 bits (279), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 53/64 (82%), Positives = 56/64 (87%)

Query: 2  SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
          SHRKF  PRHGSLGFLPRKR+ RHRGK KAFPKDD SKP  LT FLGYKAGMTHIVRDV+
Sbjct: 1  SHRKFSAPRHGSLGFLPRKRSRRHRGKAKAFPKDDKSKPVHLTCFLGYKAGMTHIVRDVD 60

Query: 62 KPGS 65
          +PGS
Sbjct: 61 RPGS 64


>gi|8572163|gb|AAF77033.1|AF247852_1 ribosomal protein L3 [Caenorhabditis remanei]
          Length = 91

 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 50/79 (63%), Positives = 62/79 (78%)

Query: 87  VGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDI 146
            GV GY+ TP+G R+L T+WA+HL+EE RRRFY NW KSKKKAFTKY KK++ +DGKK I
Sbjct: 1   AGVTGYIDTPQGPRALTTIWAEHLSEEARRRFYSNWAKSKKKAFTKYAKKWQDEDGKKLI 60

Query: 147 QAQLEKMKKYCTVIRKKAH 165
           +A   K+KKYC+ IR  AH
Sbjct: 61  EADFAKLKKYCSSIRVIAH 79


>gi|395502503|ref|XP_003755619.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L3-like
           [Sarcophilus harrisii]
          Length = 358

 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 96/288 (33%), Positives = 144/288 (50%), Gaps = 56/288 (19%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
           MS+ KF  P+HG   FLP+K        ++   KDD  K   LT F+GYK  +T I R+V
Sbjct: 1   MSYWKFFTPKHG---FLPQK--------IELKVKDDHIKLIHLTDFMGYKTDITXITREV 49

Query: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
           ++  SK++KKE    VTI+E   ++++                T++A+ +         K
Sbjct: 50  DRMDSKVNKKEVVWMVTIVEMSLMIII----------------TIFAELM--------MK 85

Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRKKAH--------------L 166
           NW KSK+K    Y K +E  D KK ++     +KKYC VI   AH              +
Sbjct: 86  NWHKSKEKXCKYYKKWWEV-DSKKXLKKNFNNIKKYCQVIXLAAHTQMLLLPLRQKKPEI 144

Query: 167 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 226
           M+IQV    V  K+++      +Q+P   VF +D+M DI  VTK  GY+ V +     +L
Sbjct: 145 MKIQV---XVTDKLEWTCEXMGQQVP---VFGQDKMTDISEVTKINGYKDVASCCHTKKL 198

Query: 227 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLG 274
             KT +GL K+ C          F++A+AGQ G  + + +NKKI+K+G
Sbjct: 199 SEKTLQGLHKLICTDFDTVTIXVFSLAQAGQMGCSYXSNINKKIHKIG 246


>gi|16082270|ref|NP_394728.1| 50S ribosomal protein L3P [Thermoplasma acidophilum DSM 1728]
 gi|42559694|sp|Q9HIQ9.1|RL3_THEAC RecName: Full=50S ribosomal protein L3P
 gi|10640617|emb|CAC12395.1| 50S ribosomal protein L3 related protein [Thermoplasma acidophilum]
          Length = 331

 Score =  110 bits (275), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 139/274 (50%), Gaps = 15/274 (5%)

Query: 8   HPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKL 67
           H R GS+ + PR RA     K++++P  +     ++  F G+K GMTH+     +  S  
Sbjct: 6   HSRRGSMAYYPRVRAKSVDPKIRSWP--EIKGEVKVQGFAGFKVGMTHVEMIDYRKKSVT 63

Query: 68  HKKETCEAVTIIETPPLVVVGVVGYVKTPRG-LRSLCTVWAQHLNEEVRRRFYKNWCKSK 126
             +     VT++E PPL VVG   Y +   G L  +   WA+ L++E+ R+      + K
Sbjct: 64  AGQPILVPVTVVEVPPLDVVGYRLYDEDAEGNLVVVFEAWAKDLDKEIFRKI----PEIK 119

Query: 127 KKAFTKYTKKYETDDGKKDIQAQLE-KMKKYCTVIRKKAHLMEIQVNGG-SVAQKVDFAY 184
           K A     + YE      D++  +  + K    +  KK  + E+++ GG SV +++++A 
Sbjct: 120 KVAERDPPESYE------DVRIIVATRNKDVPGIPSKKPEIFELRIGGGNSVKERLEYAK 173

Query: 185 GFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWH 244
               KQI      +  + +D++ +TKGKG+ G V R+GV  LPRK  +  R +  +G WH
Sbjct: 174 NHLGKQITFTDFSKPGKFVDVVSITKGKGFTGHVKRFGVKLLPRKNRKHRRMIGTLGPWH 233

Query: 245 PARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ 278
           P  V  TV +AGQ G+  RT  N ++ K G   +
Sbjct: 234 PDWVRNTVPQAGQMGFQQRTISNVRVIKYGNKEE 267


>gi|193083866|gb|ACF09547.1| ribosomal protein L3 [uncultured marine group II euryarchaeote
           KM3-85-F5]
          Length = 350

 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 139/286 (48%), Gaps = 29/286 (10%)

Query: 14  LGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 73
           +G+ PRKRA R   ++ ++P+ D S+  R+  F G+KAGMTHI+     P   L +  + 
Sbjct: 1   MGYSPRKRAVRQFPRISSWPESDASE-VRVQGFAGWKAGMTHILLRDTNPPLYLSQAGSQ 59

Query: 74  EAV-TIIETPPLVVVGVVGYVKTPR-GLRSLCTVW---AQHLNEEVRRRFYKNW-----C 123
           E   +  E   + V    G  +  R GL++   VW   +Q   E +  RF          
Sbjct: 60  EGGHSRFEASRMSVRLGSGSSRLARYGLQTAGEVWTDISQGGPENLVPRFANQTRGERDI 119

Query: 124 KSKKKAFTKYTKKYETDDGKKDIQAQLEKMKK----------------YCTVIRKKAHLM 167
           +  +K   +  +     +G +  +A +E ++                   ++  K   +M
Sbjct: 120 EEGRKPAKRGGRIPSRSNGSQ--EASIESLRGQDLSEVRLIVSTQPNMVGSIPSKTPEIM 177

Query: 168 EIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 227
           E+ + GG    K+D+A      QI +D V+Q  + +D++GVTKGKG++G + R+G+  L 
Sbjct: 178 EVDLVGGDTEAKLDWAMERLGGQIGLDDVYQAGQEVDVVGVTKGKGWQGSIKRFGLKLLT 237

Query: 228 RKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKL 273
            K  +  R+   +G +    V  T+ +AGQ GYH RTE+NK+I ++
Sbjct: 238 HKNSKRRRQGGNMGDFGTGYVRKTIRQAGQVGYHKRTELNKRILRI 283


>gi|452210662|ref|YP_007490776.1| LSU ribosomal protein L3e (L3p) [Methanosarcina mazei Tuc01]
 gi|452100564|gb|AGF97504.1| LSU ribosomal protein L3e (L3p) [Methanosarcina mazei Tuc01]
          Length = 283

 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 6/205 (2%)

Query: 79  IETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYE 138
           IETP + V  V  Y +   G +++   WA  L+ E++RR       ++ +      K  E
Sbjct: 21  IETPAIRVAAVRAYTEDSTGEKAIAEAWAADLDSELKRRIPIPAAGNQAEGLENIGKLIE 80

Query: 139 TDDGK-KDIQAQLEKMKKYCTVIRKKA-HLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAV 196
             +G+  DI+A    + K  T + KK   +ME  ++   +  K ++A       + +  V
Sbjct: 81  --EGRVSDIRAVTYTLPKSLTGVPKKVPDIMESGISAKDLGAKFEYAKSILGNLVNVTDV 138

Query: 197 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR--GLRKVACIGAWHPARVSFTVAR 254
           F+   ++D   +T GKG +G V RWG+     K  R   LR++  +G+++P+RVS+ V +
Sbjct: 139 FKNGTVVDTAAITIGKGTQGPVKRWGIQLQKGKHSRQGSLRQIGTLGSFNPSRVSWRVPQ 198

Query: 255 AGQNGYHHRTEMNKKIYKLGKASQE 279
            GQ GYH RTE NK+I K+G   +E
Sbjct: 199 MGQTGYHQRTEFNKRILKIGSDGEE 223


>gi|257076559|ref|ZP_05570920.1| 50S ribosomal protein L3P [Ferroplasma acidarmanus fer1]
          Length = 319

 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 132/266 (49%), Gaps = 12/266 (4%)

Query: 14  LGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 73
           + + PR RA +   +++++P+ +     ++ AF GYK GMTHI     +  S    K   
Sbjct: 1   MAYYPRVRAKKIGAEIRSWPEIEGK--SKIQAFAGYKVGMTHIQVTDYRKTSVTAGKTIM 58

Query: 74  EAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKY 133
             VT++E PP+ V+ +  Y     GL+    V+A+   E++ +  +K   + K K     
Sbjct: 59  VPVTVVEVPPINVIAIRYYEDGDNGLQ----VFAEKRAEQIEKEVFKRIPEIKNKE---- 110

Query: 134 TKKYETDDGKKDIQAQLEKMKKYCTVI-RKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIP 192
            K  E  D   D++  +    +  T I  K   + E++++G ++A ++  A     K++ 
Sbjct: 111 PKNIEIKD-VADVRLLVNTNPQLVTGIPTKTPEIFEVRISGSTIADRIKLAEEKLGKELH 169

Query: 193 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTV 252
            D        +D+I VTKGKG++GVV R+GV  LPR   +  R +  +G WHP  V  TV
Sbjct: 170 FDDFNSTGSFVDVISVTKGKGFQGVVKRFGVKLLPRSNRKHRRMIGTLGPWHPDWVRNTV 229

Query: 253 ARAGQNGYHHRTEMNKKIYKLGKASQ 278
            +AGQ G H RT  N +I K     Q
Sbjct: 230 PQAGQVGLHQRTIHNIRIMKTATKEQ 255


>gi|119630150|gb|EAX09745.1| hCG1794419, isoform CRA_a [Homo sapiens]
          Length = 188

 Score =  107 bits (267), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 58/106 (54%), Positives = 75/106 (70%), Gaps = 7/106 (6%)

Query: 202 MIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYH 261
           MIDIIGVTKGKGY+GV + W   +LP KTHRGL KVA IGAWHP  V+F++A AGQ G H
Sbjct: 1   MIDIIGVTKGKGYKGVTSCWHTKKLPHKTHRGLCKVAWIGAWHPDHVAFSMACAGQKGDH 60

Query: 262 HRTEMNKKIYKL--GKASQES----HSAMTEFDRSVYLLSSLMGSF 301
           H TE+NKKI K+  G  +++S    ++A T++D S   +  L+G F
Sbjct: 61  HHTEINKKICKIDQGYLTEDSKPIKNNASTDYDLSDKSI-DLLGGF 105


>gi|159145604|gb|ABW90339.1| putative ribosomal protein L3 [Sipunculus nudus]
          Length = 59

 Score =  100 bits (249), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 51/59 (86%)

Query: 1  MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD 59
          MSHR F  PRHGSLGFLP+KR+ RHRG+VKAFPKDD SKP  LTAFL YKAGMTH+VR+
Sbjct: 1  MSHRTFSAPRHGSLGFLPKKRSKRHRGEVKAFPKDDASKPVHLTAFLTYKAGMTHVVRE 59


>gi|269986342|gb|EEZ92643.1| ribosomal protein L3 [Candidatus Parvarchaeum acidiphilum ARMAN-4]
          Length = 301

 Score = 98.2 bits (243), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 121/262 (46%), Gaps = 21/262 (8%)

Query: 20  KRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTII 79
           KR     GKV+   K++      +  F GYK GM  +        S   K E     T++
Sbjct: 10  KRPYNTFGKVENLEKNE------IGGFAGYKVGMIQLSYIDSDKNSPTFKMEVITNATVL 63

Query: 80  ETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYET 139
           E+PPL V  +  Y K      S+   W   +N+ V R+      K   K+   +  K+  
Sbjct: 64  ESPPLFVCALRFYNKG----SSIGESWGSGINKFVARQVK---FKENNKSVDDFKGKF-- 114

Query: 140 DDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQK 199
           DD +  +  Q  K+      ++KK  + E+ + GG++  K+        K+I   +V + 
Sbjct: 115 DDIRLIVSTQPWKID-----LKKKPEVFELCI-GGNLEDKLTLGKELLSKEIEASSVIKD 168

Query: 200 DEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNG 259
              +D+  VTKGKG+ G V R+GV   P    +  RK   +GA   A+V FTV + G+ G
Sbjct: 169 GNFVDVASVTKGKGFTGSVKRYGVKIYPVHASKSRRKAGNLGAESMAKVQFTVPQHGRLG 228

Query: 260 YHHRTEMNKKIYKLGKASQESH 281
           ++ R E NK ++++ K + E +
Sbjct: 229 FNSRVEYNKFVFRVIKDADEVN 250


>gi|359417496|ref|ZP_09209636.1| 50S ribosomal protein L3P, partial [Candidatus Haloredivivus sp.
           G17]
 gi|358032145|gb|EHK00909.1| 50S ribosomal protein L3P [Candidatus Haloredivivus sp. G17]
          Length = 328

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 58/91 (63%)

Query: 189 KQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARV 248
           K+I    VF+  E  D++ VTKGKG EG V R+G+ +L  KT +  RK   +G WHP ++
Sbjct: 97  KEIEFSDVFEVGEYSDVVAVTKGKGVEGPVQRYGIKKLSHKTQKKRRKAGNVGPWHPDQL 156

Query: 249 SFTVARAGQNGYHHRTEMNKKIYKLGKASQE 279
           S+ +   GQ G+++RTE+NK+I   G+  +E
Sbjct: 157 SWRIPLPGQQGFNNRTEINKRILDFGEDPEE 187


>gi|149498722|ref|XP_001519230.1| PREDICTED: 60S ribosomal protein L3-like, partial [Ornithorhynchus
           anatinus]
          Length = 62

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/54 (68%), Positives = 47/54 (87%)

Query: 161 RKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGY 214
           +KK+HLMEIQVNGGS+A+KVD+A    E+Q+P+  VF +DEMID+IGVTKGKGY
Sbjct: 8   QKKSHLMEIQVNGGSIAEKVDWAREKLEQQVPVATVFGQDEMIDVIGVTKGKGY 61


>gi|377824668|gb|AFB77890.1| 60S ribosomal protein L3, partial [Alytes obstetricans]
          Length = 54

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/54 (66%), Positives = 47/54 (87%)

Query: 162 KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYE 215
           KK+HLMEIQVNGG++A+KVD+A    E+Q+ I+ VF +DEMID+IGVTKGKGY+
Sbjct: 1   KKSHLMEIQVNGGTIAEKVDWACEKLEQQVAINGVFGQDEMIDVIGVTKGKGYK 54


>gi|377824634|gb|AFB77873.1| 60S ribosomal protein L3, partial [Discoglossus montalentii]
 gi|377824636|gb|AFB77874.1| 60S ribosomal protein L3, partial [Discoglossus montalentii]
 gi|377824638|gb|AFB77875.1| 60S ribosomal protein L3, partial [Discoglossus montalentii]
 gi|377824652|gb|AFB77882.1| 60S ribosomal protein L3, partial [Discoglossus pictus]
 gi|377824654|gb|AFB77883.1| 60S ribosomal protein L3, partial [Discoglossus pictus]
 gi|377824656|gb|AFB77884.1| 60S ribosomal protein L3, partial [Discoglossus jeanneae]
 gi|377824658|gb|AFB77885.1| 60S ribosomal protein L3, partial [Discoglossus jeanneae]
 gi|377824660|gb|AFB77886.1| 60S ribosomal protein L3, partial [Discoglossus scovazzi]
 gi|377824662|gb|AFB77887.1| 60S ribosomal protein L3, partial [Discoglossus galganoi galganoi]
 gi|377824664|gb|AFB77888.1| 60S ribosomal protein L3, partial [Discoglossus galganoi galganoi]
 gi|377824666|gb|AFB77889.1| 60S ribosomal protein L3, partial [Discoglossus galganoi galganoi]
          Length = 54

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/53 (67%), Positives = 45/53 (84%)

Query: 162 KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGY 214
           KK+HLMEIQVNGG++A+KVD+A    E+Q+ I  VF +DEMID+IGVTKGKGY
Sbjct: 1   KKSHLMEIQVNGGTIAEKVDWAREKLEQQVAISGVFGQDEMIDVIGVTKGKGY 53


>gi|377824640|gb|AFB77876.1| 60S ribosomal protein L3, partial [Discoglossus sardus]
 gi|377824642|gb|AFB77877.1| 60S ribosomal protein L3, partial [Discoglossus sardus]
 gi|377824644|gb|AFB77878.1| 60S ribosomal protein L3, partial [Discoglossus sardus]
 gi|377824646|gb|AFB77879.1| 60S ribosomal protein L3, partial [Discoglossus sardus]
 gi|377824648|gb|AFB77880.1| 60S ribosomal protein L3, partial [Discoglossus sardus]
 gi|377824650|gb|AFB77881.1| 60S ribosomal protein L3, partial [Discoglossus sardus]
          Length = 54

 Score = 77.0 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/54 (66%), Positives = 46/54 (85%)

Query: 162 KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYE 215
           KK+HLMEIQVNGG++A+KVD+A    E+Q+ I  VF +DEMID+IGVTKGKGY+
Sbjct: 1   KKSHLMEIQVNGGTIAEKVDWAREKLEQQVAIGGVFGQDEMIDVIGVTKGKGYK 54


>gi|167043662|gb|ABZ08355.1| hypothetical protein ALOHA_HF4000APKG2O16ctg10g1, partial
          [uncultured marine crenarchaeote HF4000_APKG2O16]
          Length = 106

 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 57/98 (58%), Gaps = 1/98 (1%)

Query: 1  MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
          M HR+   PR GSL +LPR RA     +++A+PK +  +P +L A  G+KAG   IV   
Sbjct: 1  MGHRRHSAPRRGSLAYLPRGRAKSMEARIRAWPKVNSDEP-KLLAHAGFKAGCVQIVNID 59

Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRG 98
          ++  +  H K+     T+I TPP+++ G+ GY K P G
Sbjct: 60 DREKTPNHGKQLVSLGTVIVTPPILIAGIRGYSKDPDG 97


>gi|68011480|ref|XP_671157.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56487082|emb|CAH93715.1| hypothetical protein PB000142.00.0 [Plasmodium berghei]
          Length = 139

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/63 (52%), Positives = 43/63 (68%), Gaps = 2/63 (3%)

Query: 239 CIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRSVYLLSSLM 298
           CIGAWHPARV F V R GQ GY HRTE NKKIY++G   ++ ++A T+ D +   ++  M
Sbjct: 1   CIGAWHPARVQFQVPRHGQKGYFHRTERNKKIYRIG-LKKDKNNASTDADITEKKITP-M 58

Query: 299 GSF 301
           G F
Sbjct: 59  GGF 61


>gi|285025766|gb|ADC33744.1| ribosomal protein L3 [Pelodytes punctatus]
 gi|285025768|gb|ADC33745.1| ribosomal protein L3 [Pelodytes punctatus]
 gi|285025770|gb|ADC33746.1| ribosomal protein L3 [Pelodytes punctatus]
 gi|285025772|gb|ADC33747.1| ribosomal protein L3 [Pelodytes punctatus]
 gi|285025774|gb|ADC33748.1| ribosomal protein L3 [Pelodytes ibericus]
 gi|285025776|gb|ADC33749.1| ribosomal protein L3 [Pelodytes punctatus]
 gi|285025778|gb|ADC33750.1| ribosomal protein L3 [Pelodytes ibericus]
 gi|285025780|gb|ADC33751.1| ribosomal protein L3 [Pelodytes punctatus]
 gi|285025782|gb|ADC33752.1| ribosomal protein L3 [Pelodytes punctatus]
          Length = 45

 Score = 61.2 bits (147), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 26/45 (57%), Positives = 38/45 (84%)

Query: 171 VNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYE 215
           VNGG++++KVD+A    E+Q+ ++ VF +DEMID+IGVTKGKGY+
Sbjct: 1   VNGGTISEKVDWAREKLEQQVAVNGVFGQDEMIDVIGVTKGKGYK 45


>gi|404486839|ref|ZP_11022027.1| 50S ribosomal protein L3 [Barnesiella intestinihominis YIT 11860]
 gi|404335893|gb|EJZ62359.1| 50S ribosomal protein L3 [Barnesiella intestinihominis YIT 11860]
          Length = 204

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 5/87 (5%)

Query: 191 IPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT---HRGLRKVACIGAW-HPA 246
           I +D +F+  E +D+IGV+KGKG++GVV R G   + + T   H  LR    IGA  +PA
Sbjct: 94  IAVD-LFEGAEYVDVIGVSKGKGFQGVVKRHGFGGVGQTTHGQHNRLRAPGSIGACSYPA 152

Query: 247 RVSFTVARAGQNGYHHRTEMNKKIYKL 273
           RV      AGQ G H  T  N ++ K+
Sbjct: 153 RVFKGTRMAGQMGNHRVTVQNLQVLKV 179


>gi|154343495|ref|XP_001567693.1| putative ribosomal protein L3 [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134065025|emb|CAM43137.1| putative ribosomal protein L3 [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 154

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/53 (49%), Positives = 39/53 (73%), Gaps = 2/53 (3%)

Query: 250 FTVARAGQNGYHHRTEMNKKIYKLGKA-SQESHSAMTEFDRSVYLLSSLMGSF 301
           +TVARAGQ+GYHHRT++NKKIY++G+  + E + A T +D +   ++  MG F
Sbjct: 2   YTVARAGQHGYHHRTQLNKKIYQIGRTVAVEPNQATTTYDLTAKTITP-MGGF 53


>gi|365121785|ref|ZP_09338699.1| 50S ribosomal protein L3 [Tannerella sp. 6_1_58FAA_CT1]
 gi|363644386|gb|EHL83673.1| 50S ribosomal protein L3 [Tannerella sp. 6_1_58FAA_CT1]
          Length = 205

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 5/87 (5%)

Query: 191 IPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT---HRGLRKVACIGAW-HPA 246
           I ID +F +D+ +D++G +KGKGY+GVV R G   + + T   H  LR    IGA  +PA
Sbjct: 95  ISID-LFAEDDFVDVVGTSKGKGYQGVVKRHGFGGVGQTTHGQHNRLRAPGSIGACSYPA 153

Query: 247 RVSFTVARAGQNGYHHRTEMNKKIYKL 273
           RV      AGQ G    T  N ++ K+
Sbjct: 154 RVFKGTRMAGQTGNERVTVQNLQVLKV 180


>gi|119630151|gb|EAX09746.1| hCG1794419, isoform CRA_b [Homo sapiens]
          Length = 112

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/53 (47%), Positives = 40/53 (75%)

Query: 98  GLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQL 150
           GLR+   ++A+H+N+E +R F  N  KS+KKAFTKY KK++ +DGKK ++ ++
Sbjct: 1   GLRTFKAIFAEHINDECKRCFSNNRHKSRKKAFTKYCKKWQDEDGKKQLEKRV 53


>gi|340621220|ref|YP_004739671.1| 50S ribosomal protein L3 [Capnocytophaga canimorsus Cc5]
 gi|339901485|gb|AEK22564.1| 50S ribosomal protein L3 [Capnocytophaga canimorsus Cc5]
          Length = 205

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/120 (37%), Positives = 64/120 (53%), Gaps = 10/120 (8%)

Query: 163 KAHLMEIQVNGGSVAQKVDFAYGFFEKQIPI-DAV----FQKDEMIDIIGVTKGKGYEGV 217
           KA L   +  G SV +KV   +  FEK+  I DA+    F + E +DI G++KGKG++GV
Sbjct: 62  KAELGHFKKAGSSVKKKV-VEFQGFEKEYKIGDAISVELFSEGEFVDITGISKGKGFQGV 120

Query: 218 VTRWGVTRLPRKT---HRGLRKVACIGA-WHPARVSFTVARAGQNGYHHRTEMNKKIYKL 273
           V R G   + + T   H  LR    IGA  +P+RV   +  AG+ G    T  N K+ K+
Sbjct: 121 VKRHGFGGVGQSTHGQHNRLRAPGSIGASSYPSRVFKGMRMAGRMGAEKVTVQNLKVLKV 180


>gi|449708198|gb|EMD47703.1| 60S ribosomal protein L3, partial [Entamoeba histolytica KU27]
          Length = 56

 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 36/55 (65%)

Query: 84  LVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYE 138
           +VV G VGY KT  GL+ +  V+A+H+ +E +RR+ K W K+ K  F  +T+KY 
Sbjct: 1   MVVAGFVGYKKTTTGLKPITAVFAEHIADEFKRRYTKKWYKNTKNQFAVHTEKYN 55


>gi|294893394|ref|XP_002774450.1| hypothetical protein Pmar_PMAR006031 [Perkinsus marinus ATCC
          50983]
 gi|239879843|gb|EER06266.1| hypothetical protein Pmar_PMAR006031 [Perkinsus marinus ATCC
          50983]
          Length = 54

 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/31 (80%), Positives = 27/31 (87%)

Query: 1  MSHRKFEHPRHGSLGFLPRKRASRHRGKVKA 31
          MSHRKFE PRHGSLGFLPRKR   H+GKVK+
Sbjct: 1  MSHRKFEVPRHGSLGFLPRKRTRHHKGKVKS 31


>gi|119602067|gb|EAW81661.1| hCG22885, isoform CRA_b [Homo sapiens]
          Length = 169

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 8/81 (9%)

Query: 226 LPRKTHRG-LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQ 278
           LPR+   G +     +   H A + F+VARAGQ GYHHRTE+NKKIYK+G+         
Sbjct: 6   LPRQEAEGPMSGSGELSVRHHA-IKFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKL 64

Query: 279 ESHSAMTEFDRSVYLLSSLMG 299
             ++A T++D S   ++ L G
Sbjct: 65  IKNNASTDYDLSDKSINPLGG 85


>gi|383449889|ref|YP_005356610.1| 50S ribosomal protein L3 [Flavobacterium indicum GPTSA100-9]
 gi|380501511|emb|CCG52553.1| 50S ribosomal protein L3 [Flavobacterium indicum GPTSA100-9]
          Length = 205

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 15/143 (10%)

Query: 141 DGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGFFEKQ------IPID 194
           DG + +Q   +   +  TV  +  H  +     G+VA+K    +  FE +      I +D
Sbjct: 43  DGYEALQLGFDDKTEKHTVKAEAGHFAK----AGTVAKKKVVEFQGFETEYKLGDVINVD 98

Query: 195 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT---HRGLRKVACIGA-WHPARVSF 250
            +F + E +D++GV+KGKG++GVV R G   + + T   H  LR    +GA  +P+RV  
Sbjct: 99  -LFAEGEFVDVLGVSKGKGFQGVVKRHGFGGVGQATHGQHNRLRAPGSVGASSYPSRVFK 157

Query: 251 TVARAGQNGYHHRTEMNKKIYKL 273
            +  AG+ G  + T  N ++ K+
Sbjct: 158 GMRMAGRTGGENVTVQNLRVLKV 180


>gi|294507051|ref|YP_003571109.1| 50S ribosomal protein L3 [Salinibacter ruber M8]
 gi|294343379|emb|CBH24157.1| 50S ribosomal protein L3 [Salinibacter ruber M8]
          Length = 208

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 4/87 (4%)

Query: 191 IPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG---LRKVACIGA-WHPA 246
           + ++ +FQ+DE ID++GV+KGKG++GVV R G + +   TH      R    IGA   P+
Sbjct: 96  VRVEDLFQEDERIDVVGVSKGKGFQGVVKRHGFSGVGMMTHGQSDRQRHPGSIGASADPS 155

Query: 247 RVSFTVARAGQNGYHHRTEMNKKIYKL 273
           RV   V  AGQ G       N ++ ++
Sbjct: 156 RVFKGVRMAGQTGGERTKIQNLRVVRI 182


>gi|298373698|ref|ZP_06983687.1| 50S ribosomal protein L3 [Bacteroidetes oral taxon 274 str. F0058]
 gi|298274750|gb|EFI16302.1| 50S ribosomal protein L3 [Bacteroidetes oral taxon 274 str. F0058]
          Length = 206

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 54/88 (61%), Gaps = 6/88 (6%)

Query: 191 IPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH----RGLRKVACIGA-WHP 245
           +  DAVF++++ +D++G++KGKG++GVV R G   + ++TH    RG R    +GA  +P
Sbjct: 95  VTADAVFEENDFVDVVGISKGKGFQGVVKRHGFGGVGQQTHGQHNRG-RAPGSMGASSYP 153

Query: 246 ARVSFTVARAGQNGYHHRTEMNKKIYKL 273
           ++V   +  AG+ G    T  N ++ K+
Sbjct: 154 SKVVKGMRMAGRTGGDRVTIQNLQVVKI 181


>gi|145497859|ref|XP_001434918.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124402046|emb|CAK67521.1| unnamed protein product [Paramecium tetraurelia]
          Length = 44

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/32 (68%), Positives = 26/32 (81%)

Query: 1  MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAF 32
          MSHRKFE PRHG+LGF PRKR   HRG+++ F
Sbjct: 1  MSHRKFEAPRHGNLGFTPRKRTKHHRGRIRDF 32


>gi|302315353|gb|ADL14525.1| ribosomal protein L3-B3 [Triticum aestivum]
          Length = 25

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/25 (96%), Positives = 24/25 (96%)

Query: 4  RKFEHPRHGSLGFLPRKRASRHRGK 28
          RKFEHPRHGSLGFLPRKR SRHRGK
Sbjct: 1  RKFEHPRHGSLGFLPRKRCSRHRGK 25


>gi|119602066|gb|EAW81660.1| hCG22885, isoform CRA_a [Homo sapiens]
          Length = 97

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/29 (72%), Positives = 26/29 (89%)

Query: 248 VSFTVARAGQNGYHHRTEMNKKIYKLGKA 276
           + F+VARAGQ GYHHRTE+NKKIYK+G+ 
Sbjct: 28  IKFSVARAGQKGYHHRTEINKKIYKIGQG 56


>gi|163786190|ref|ZP_02180638.1| 50S ribosomal protein L3 [Flavobacteriales bacterium ALC-1]
 gi|159878050|gb|EDP72106.1| 50S ribosomal protein L3 [Flavobacteriales bacterium ALC-1]
          Length = 205

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 61/119 (51%), Gaps = 8/119 (6%)

Query: 163 KAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAV----FQKDEMIDIIGVTKGKGYEGVV 218
           KA L   +  G SV +KV    GF E+    DA+    F + E +D+ G +KGKG++GVV
Sbjct: 62  KADLGHAKKAGTSVKRKVVEFKGFGEEYKLGDAITVEQFTEGEFVDVAGTSKGKGFQGVV 121

Query: 219 TRWGVTRLPRKT---HRGLRKVACIGAW-HPARVSFTVARAGQNGYHHRTEMNKKIYKL 273
            R G   + + T   H  LR    IGA  +PARV   +  AG+ G       N ++YK+
Sbjct: 122 KRHGFAGVGQATHGQHNRLRAPGSIGAASYPARVFKGMKMAGRMGGETVKVQNLRVYKV 180


>gi|116748990|ref|YP_845677.1| 50S ribosomal protein L3 [Syntrophobacter fumaroxidans MPOB]
 gi|166990941|sp|A0LIJ0.1|RL3_SYNFM RecName: Full=50S ribosomal protein L3
 gi|116698054|gb|ABK17242.1| LSU ribosomal protein L3P [Syntrophobacter fumaroxidans MPOB]
          Length = 210

 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 40/80 (50%), Gaps = 2/80 (2%)

Query: 196 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIG-AWHPARVSFTVA 253
           VF+  E ID+IG TKGKGY G + RWG  R P     + +R+    G A  P RV     
Sbjct: 101 VFEIGERIDVIGTTKGKGYAGTIKRWGFQRGPSGHGSKNIREPGSTGNATFPGRVIKGKK 160

Query: 254 RAGQNGYHHRTEMNKKIYKL 273
             GQ G    T MN +I  +
Sbjct: 161 MPGQKGNKRTTVMNLRIIDV 180


>gi|83816242|ref|YP_445167.1| 50S ribosomal protein L3 [Salinibacter ruber DSM 13855]
 gi|109893553|sp|Q2S3R4.1|RL3_SALRD RecName: Full=50S ribosomal protein L3
 gi|83757636|gb|ABC45749.1| ribosomal protein L3 [Salinibacter ruber DSM 13855]
          Length = 208

 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 4/87 (4%)

Query: 191 IPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG---LRKVACIGA-WHPA 246
           + +  +FQ+DE ID++GV+KGKG++GVV R G + +   TH      R    IGA   P+
Sbjct: 96  VRVQDLFQEDERIDVVGVSKGKGFQGVVKRHGFSGVGMMTHGQSDRQRHPGSIGASADPS 155

Query: 247 RVSFTVARAGQNGYHHRTEMNKKIYKL 273
           RV   V  AGQ G       N ++ ++
Sbjct: 156 RVFKGVRMAGQTGGERTKIQNLRVVRI 182


>gi|312130549|ref|YP_003997889.1| 50S ribosomal protein L3 [Leadbetterella byssophila DSM 17132]
 gi|311907095|gb|ADQ17536.1| LSU ribosomal protein L3P [Leadbetterella byssophila DSM 17132]
          Length = 205

 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 7/97 (7%)

Query: 181 DFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT---HRGLRKV 237
           +FA G     I ++ VF + E +D+ G TKGKG++GVV R G   + + T   H  LR  
Sbjct: 87  EFALG---DTIKVEDVFVEGEFVDVSGNTKGKGFQGVVKRHGFGGVGQSTHGQHNRLRAP 143

Query: 238 ACIGAW-HPARVSFTVARAGQNGYHHRTEMNKKIYKL 273
             IGA  +PARV   +  AG+ G    T  N ++ KL
Sbjct: 144 GSIGACSYPARVFKGLRMAGRMGNTKVTIQNLQVLKL 180


>gi|218117235|emb|CAQ37747.1| 60S ribosomal protein L3 [Brachionus plicatilis]
          Length = 130

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/49 (51%), Positives = 36/49 (73%), Gaps = 2/49 (4%)

Query: 253 ARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRSVYLLSSLMGSF 301
           ARAGQ GYHHRTE+NKK+Y++G  + +++ A TEFD +   ++  MG F
Sbjct: 1   ARAGQKGYHHRTEINKKVYRIGSGADKAN-AKTEFDPAEKSITP-MGGF 47


>gi|319952196|ref|YP_004163463.1| 50S ribosomal protein L3 [Cellulophaga algicola DSM 14237]
 gi|319420856|gb|ADV47965.1| LSU ribosomal protein L3P [Cellulophaga algicola DSM 14237]
          Length = 205

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 6/98 (6%)

Query: 181 DFAYGF-FEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT---HRGLRK 236
           DF  G+     I +D +F + E +D IG++KGKG++GVV R G   + + T   H  LR 
Sbjct: 84  DFEGGYKLGDTIGVD-LFVEGEFVDAIGISKGKGFQGVVKRHGFAGVGQATHGQHNRLRA 142

Query: 237 VACIGAW-HPARVSFTVARAGQNGYHHRTEMNKKIYKL 273
              +GA  +PARV   +  AG+ G    T  N K+ K+
Sbjct: 143 PGSVGAASYPARVFKGMKMAGRMGTDKVTVQNLKVLKV 180


>gi|169823852|ref|YP_001691463.1| 50S ribosomal protein L3 [Finegoldia magna ATCC 29328]
 gi|303234744|ref|ZP_07321370.1| 50S ribosomal protein L3 [Finegoldia magna BVS033A4]
 gi|417925294|ref|ZP_12568720.1| 50S ribosomal protein L3 [Finegoldia magna SY403409CC001050417]
 gi|226725177|sp|B0RZU0.1|RL3_FINM2 RecName: Full=50S ribosomal protein L3
 gi|167830657|dbj|BAG07573.1| 50S ribosomal protein L3 [Finegoldia magna ATCC 29328]
 gi|302494085|gb|EFL53865.1| 50S ribosomal protein L3 [Finegoldia magna BVS033A4]
 gi|341592014|gb|EGS34910.1| 50S ribosomal protein L3 [Finegoldia magna SY403409CC001050417]
          Length = 209

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 60/241 (24%), Positives = 95/241 (39%), Gaps = 72/241 (29%)

Query: 43  LTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSL 102
           + + LG K GMT I           ++  +   VT+IE  P+VV  +    K   G  ++
Sbjct: 1   MKSILGKKIGMTQI----------FNEDGSVVPVTVIEAGPMVVTQI--KTKEKEGYNAI 48

Query: 103 CTVWAQ----HLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCT 158
              + +    H+N+ +R  F K     KK                               
Sbjct: 49  QVGYIEKKEKHVNQPMRGHFGKAGVSFKK------------------------------- 77

Query: 159 VIRKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVV 218
                 HL E ++N         F  G    +I +D +FQ  +++D+IG++KGKG +G +
Sbjct: 78  ------HLREFKIN-----DDEQFNLG---DEIKLD-IFQDGDVVDVIGISKGKGTQGAI 122

Query: 219 TRWGVTRLP----RKTHR--GLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYK 272
            R   +R P     K+HR  G R        +PARV      +G+ G+   T  N KI K
Sbjct: 123 VRHNYSRGPMGHGSKSHRVAGARSAGS----YPARVFKGRKGSGKMGHDRVTVQNLKIVK 178

Query: 273 L 273
           +
Sbjct: 179 V 179


>gi|213962845|ref|ZP_03391105.1| 50S ribosomal protein L3 [Capnocytophaga sputigena Capno]
 gi|213954502|gb|EEB65824.1| 50S ribosomal protein L3 [Capnocytophaga sputigena Capno]
          Length = 225

 Score = 50.8 bits (120), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 61/120 (50%), Gaps = 10/120 (8%)

Query: 163 KAHLMEIQVNGGSVAQKVDFAYGFFEK-----QIPIDAVFQKDEMIDIIGVTKGKGYEGV 217
           KA L   +  G SV +KV    GF +       I +D  F + E +DI GV+KGKG++GV
Sbjct: 82  KAELGHFKKAGTSVKKKVVEFQGFEDNYKLGDTITVD-FFTEGEFVDITGVSKGKGFQGV 140

Query: 218 VTRWGVTRLPRKT---HRGLRKVACIGA-WHPARVSFTVARAGQNGYHHRTEMNKKIYKL 273
           V R G   + + T   H  LR    +GA  +P+RV   +  AG+ G    T  N K+ K+
Sbjct: 141 VRRHGFGGVGQTTHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGAEKVTVQNLKVLKV 200


>gi|393779790|ref|ZP_10368025.1| 50S ribosomal protein L3 [Capnocytophaga sp. oral taxon 412 str.
           F0487]
 gi|420149443|ref|ZP_14656619.1| 50S ribosomal protein L3 [Capnocytophaga sp. oral taxon 335 str.
           F0486]
 gi|392609747|gb|EIW92550.1| 50S ribosomal protein L3 [Capnocytophaga sp. oral taxon 412 str.
           F0487]
 gi|394753666|gb|EJF37173.1| 50S ribosomal protein L3 [Capnocytophaga sp. oral taxon 335 str.
           F0486]
          Length = 195

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 61/120 (50%), Gaps = 10/120 (8%)

Query: 163 KAHLMEIQVNGGSVAQKVDFAYGFFEK-----QIPIDAVFQKDEMIDIIGVTKGKGYEGV 217
           KA L   +  G SV +KV    GF +       I +D  F + E +DI GV+KGKG++GV
Sbjct: 52  KAELGHFKKAGTSVKKKVVEFQGFEDNYKLGDTITVD-FFTEGEFVDITGVSKGKGFQGV 110

Query: 218 VTRWGVTRLPRKT---HRGLRKVACIGA-WHPARVSFTVARAGQNGYHHRTEMNKKIYKL 273
           V R G   + + T   H  LR    +GA  +P+RV   +  AG+ G    T  N K+ K+
Sbjct: 111 VRRHGFGGVGQTTHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGAEKVTVQNLKVLKV 170


>gi|429727121|ref|ZP_19261900.1| 50S ribosomal protein L3 [Prevotella sp. oral taxon 473 str. F0040]
 gi|429144825|gb|EKX87932.1| 50S ribosomal protein L3 [Prevotella sp. oral taxon 473 str. F0040]
          Length = 204

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 9/96 (9%)

Query: 187 FEKQIPI-DAV----FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG---LRKVA 238
           +E+++ + DAV    F +++ +D++G +KGKG++GVV R G   + + TH     LRK  
Sbjct: 84  YEQELNLGDAVTVELFGENDFVDVVGTSKGKGFQGVVKRHGFGGVGQSTHGQDDRLRKPG 143

Query: 239 CIGAW-HPARVSFTVARAGQNGYHHRTEMNKKIYKL 273
            IGA  +PA+V   +   GQ G    T  N K+ K+
Sbjct: 144 SIGACSYPAKVFKGLRMGGQMGGKRVTTQNLKVLKV 179


>gi|256819982|ref|YP_003141261.1| 50S ribosomal protein L3 [Capnocytophaga ochracea DSM 7271]
 gi|315225401|ref|ZP_07867215.1| 50S ribosomal protein L3 [Capnocytophaga ochracea F0287]
 gi|420159712|ref|ZP_14666510.1| 50S ribosomal protein L3 [Capnocytophaga ochracea str. Holt 25]
 gi|256581565|gb|ACU92700.1| ribosomal protein L3 [Capnocytophaga ochracea DSM 7271]
 gi|314944674|gb|EFS96709.1| 50S ribosomal protein L3 [Capnocytophaga ochracea F0287]
 gi|394761763|gb|EJF44091.1| 50S ribosomal protein L3 [Capnocytophaga ochracea str. Holt 25]
          Length = 205

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 61/120 (50%), Gaps = 10/120 (8%)

Query: 163 KAHLMEIQVNGGSVAQKVDFAYGFFEK-----QIPIDAVFQKDEMIDIIGVTKGKGYEGV 217
           KA L   +  G SV +KV    GF +       I +D  F + E +DI GV+KGKG++GV
Sbjct: 62  KAELGHFKKAGTSVKKKVVEFQGFEDNYKLGDTITVD-FFTEGEFVDITGVSKGKGFQGV 120

Query: 218 VTRWGVTRLPRKT---HRGLRKVACIGA-WHPARVSFTVARAGQNGYHHRTEMNKKIYKL 273
           V R G   + + T   H  LR    +GA  +P+RV   +  AG+ G    T  N K+ K+
Sbjct: 121 VRRHGFGGVGQTTHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGAEKVTVQNLKVLKV 180


>gi|429746494|ref|ZP_19279842.1| 50S ribosomal protein L3 [Capnocytophaga sp. oral taxon 380 str.
           F0488]
 gi|429166100|gb|EKY08107.1| 50S ribosomal protein L3 [Capnocytophaga sp. oral taxon 380 str.
           F0488]
          Length = 205

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 61/120 (50%), Gaps = 10/120 (8%)

Query: 163 KAHLMEIQVNGGSVAQKVDFAYGFFEK-----QIPIDAVFQKDEMIDIIGVTKGKGYEGV 217
           KA L   +  G SV +KV    GF +       I +D  F + E +DI GV+KGKG++GV
Sbjct: 62  KAELGHFKKAGTSVKKKVVEFQGFEDNYKLGDTITVD-FFTEGEFVDITGVSKGKGFQGV 120

Query: 218 VTRWGVTRLPRKT---HRGLRKVACIGA-WHPARVSFTVARAGQNGYHHRTEMNKKIYKL 273
           V R G   + + T   H  LR    +GA  +P+RV   +  AG+ G    T  N K+ K+
Sbjct: 121 VRRHGFGGVGQTTHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGAEKVTVQNLKVLKV 180


>gi|325287048|ref|YP_004262838.1| 50S ribosomal protein L3 [Cellulophaga lytica DSM 7489]
 gi|324322502|gb|ADY29967.1| 50S ribosomal protein L3 [Cellulophaga lytica DSM 7489]
          Length = 205

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 4/81 (4%)

Query: 197 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT---HRGLRKVACIGAW-HPARVSFTV 252
           F + E +D++G +KGKG++GVV R G   + + T   H  LR    IGA  +PARV   +
Sbjct: 100 FVEGEFVDVVGTSKGKGFQGVVKRHGFGGVGQATHGQHNRLRAPGSIGAASYPARVFKGM 159

Query: 253 ARAGQNGYHHRTEMNKKIYKL 273
             AG+ G    T  N ++YK+
Sbjct: 160 KMAGRMGGERVTVQNLRVYKV 180


>gi|429756987|ref|ZP_19289545.1| 50S ribosomal protein L3 [Capnocytophaga sp. oral taxon 324 str.
           F0483]
 gi|429169761|gb|EKY11498.1| 50S ribosomal protein L3 [Capnocytophaga sp. oral taxon 324 str.
           F0483]
          Length = 205

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 61/120 (50%), Gaps = 10/120 (8%)

Query: 163 KAHLMEIQVNGGSVAQKVDFAYGFFEK-----QIPIDAVFQKDEMIDIIGVTKGKGYEGV 217
           KA L   +  G SV +KV    GF +       I +D  F + E +DI GV+KGKG++GV
Sbjct: 62  KAELGHFKKAGTSVKRKVVEFQGFEDNYKLGDTITVD-FFTEGEFVDITGVSKGKGFQGV 120

Query: 218 VTRWGVTRLPRKT---HRGLRKVACIGA-WHPARVSFTVARAGQNGYHHRTEMNKKIYKL 273
           V R G   + + T   H  LR    +GA  +P+RV   +  AG+ G    T  N K+ K+
Sbjct: 121 VRRHGFGGVGQTTHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGAEKVTVQNLKVLKV 180


>gi|160914559|ref|ZP_02076774.1| hypothetical protein EUBDOL_00565 [Eubacterium dolichum DSM 3991]
 gi|158433717|gb|EDP12006.1| 50S ribosomal protein L3 [Eubacterium dolichum DSM 3991]
          Length = 234

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 12/149 (8%)

Query: 135 KKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKV---DFAYGFFEKQI 191
           KK   +DG   +Q   E +K+  T      H  +        A++V   DFA      ++
Sbjct: 42  KKTVENDGYNAVQIGFEDIKEKRTTKANVGHAKKANTTAKRFAREVRDADFADLDLGAEV 101

Query: 192 PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFT 251
            +D +F   E +D+IG +KGKGY G + R    + P KTH G + +  IG+     ++  
Sbjct: 102 KVD-IFVAGETVDVIGTSKGKGYNGTIVRNNAHQGP-KTHGGSKNIRHIGSLATNGITSR 159

Query: 252 VAR-------AGQNGYHHRTEMNKKIYKL 273
             +       AGQ G +  T  N  + K+
Sbjct: 160 QGKILKGTIMAGQEGGYRTTNQNLTVIKV 188


>gi|305665137|ref|YP_003861424.1| 50S ribosomal protein L3 [Maribacter sp. HTCC2170]
 gi|88709889|gb|EAR02121.1| 50S ribosomal protein L3 [Maribacter sp. HTCC2170]
          Length = 207

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 5/87 (5%)

Query: 191 IPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT---HRGLRKVACIGAW-HPA 246
           I +D VF + E +D++G +KGKG++GVV R G   + + T   H  LR    IGA  +PA
Sbjct: 95  IGVD-VFVEGEFVDVVGTSKGKGFQGVVKRHGFAGVGQATHGQHNRLRAPGSIGAASYPA 153

Query: 247 RVSFTVARAGQNGYHHRTEMNKKIYKL 273
           RV   +  AG+ G    T  N ++ K+
Sbjct: 154 RVFKGMRMAGRMGGDRTTVQNLRVLKI 180


>gi|323344636|ref|ZP_08084860.1| 50S ribosomal protein L3 [Prevotella oralis ATCC 33269]
 gi|323093906|gb|EFZ36483.1| 50S ribosomal protein L3 [Prevotella oralis ATCC 33269]
          Length = 204

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 196 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG---LRKVACIGAW-HPARVSFT 251
           +F+  E +D+IG +KGKG++GVV R G   + + TH      RK   IGA  +PA+V   
Sbjct: 98  LFEGTEFVDVIGTSKGKGFQGVVKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKG 157

Query: 252 VARAGQNGYHHRTEMNKKIYKL 273
           +  AGQ G    T  N ++ K+
Sbjct: 158 MRMAGQMGGDRVTTQNLRVLKV 179


>gi|373461635|ref|ZP_09553374.1| 50S ribosomal protein L3 [Prevotella maculosa OT 289]
 gi|371951939|gb|EHO69781.1| 50S ribosomal protein L3 [Prevotella maculosa OT 289]
          Length = 194

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 69/146 (47%), Gaps = 12/146 (8%)

Query: 136 KYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDA 195
           K E  DG K +Q   E+ K+     R    L+      G+  +K    + F E+    D 
Sbjct: 28  KTEEKDGYKALQLGFEEAKER----RTSKPLLGTFKKAGTTPKKHLAEFKFDEEHNLGDT 83

Query: 196 V----FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG---LRKVACIGAW-HPAR 247
           +    F   + +D++G++KGKG++GVV R G   + + TH      RK   IGA  +PA+
Sbjct: 84  ITVELFADTKFVDVVGISKGKGFQGVVKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAK 143

Query: 248 VSFTVARAGQNGYHHRTEMNKKIYKL 273
           V   +  AGQ G    T  N ++ K+
Sbjct: 144 VFKGMRMAGQMGGDRVTTQNLQVLKV 169


>gi|85858146|ref|YP_460348.1| 50S ribosomal protein L3P [Syntrophus aciditrophicus SB]
 gi|109893562|sp|Q2LQA1.1|RL3_SYNAS RecName: Full=50S ribosomal protein L3
 gi|85721237|gb|ABC76180.1| LSU ribosomal protein L3P [Syntrophus aciditrophicus SB]
          Length = 218

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 63/133 (47%), Gaps = 18/133 (13%)

Query: 144 KDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMI 203
           K +Q    K  K C  I K+    +IQ          ++  G   ++I +D +F+  EM+
Sbjct: 72  KPLQGHFAKADKGCFRILKEMRCDQIQ----------EYELG---QEITLD-IFESGEMV 117

Query: 204 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGA-WHPARVSFTVARAGQNGY 260
           DI G TKGKG+ GV+ R G  R  R +H  +  R    IGA  +P+RV       GQ G 
Sbjct: 118 DITGTTKGKGFAGVIKRHGF-RGGRSSHGSMFHRAPGSIGASAYPSRVFKGKKLPGQMGN 176

Query: 261 HHRTEMNKKIYKL 273
             +T  N  I+ L
Sbjct: 177 KQKTVKNLMIWSL 189


>gi|220930965|ref|YP_002507873.1| 50S ribosomal protein L3 [Halothermothrix orenii H 168]
 gi|254803676|sp|B8D0C4.1|RL3_HALOH RecName: Full=50S ribosomal protein L3
 gi|219992275|gb|ACL68878.1| ribosomal protein L3 [Halothermothrix orenii H 168]
          Length = 211

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 4/142 (2%)

Query: 135 KKYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGS-VAQKVDFAYGFFE-KQIP 192
           KK E  DG   +Q   E + ++      K H     V     V + +DF     E  +I 
Sbjct: 38  KKVEERDGYNALQVGFEDVPEHRVNKPLKGHFERAGVKPKKHVKEFMDFPEDLNEGDEIT 97

Query: 193 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGAWHPARVSFT 251
           +D +F++ E++D+ G++KGKG+ G + RW  +R P     R  R    IGA   +RV   
Sbjct: 98  VD-IFEEGELVDVTGISKGKGFAGTIKRWNFSRGPMSHGSRFHRAPGSIGAVDASRVFKG 156

Query: 252 VARAGQNGYHHRTEMNKKIYKL 273
               G+ G+   T  N ++ ++
Sbjct: 157 QKLPGRMGHDRVTIQNLEVVRV 178


>gi|302379782|ref|ZP_07268266.1| 50S ribosomal protein L3 [Finegoldia magna ACS-171-V-Col3]
 gi|302312370|gb|EFK94367.1| 50S ribosomal protein L3 [Finegoldia magna ACS-171-V-Col3]
          Length = 209

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/241 (24%), Positives = 94/241 (39%), Gaps = 72/241 (29%)

Query: 43  LTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSL 102
           + + LG K GMT I           ++  +   VT+IE  P+VV  +    K   G  ++
Sbjct: 1   MKSILGKKIGMTQI----------FNEDGSVVPVTVIEAGPMVVTQI--KTKEKEGYNAI 48

Query: 103 CTVWAQ----HLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCT 158
              + +    H+N+ +R  F K     KK                               
Sbjct: 49  QVGYIEKKEKHVNQPMRGHFGKAGVSFKK------------------------------- 77

Query: 159 VIRKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVV 218
                 HL E ++N         F  G    +I +D +FQ  +++D+IG++KGKG +G +
Sbjct: 78  ------HLREFKIN-----DDEQFNLG---DEIKLD-IFQDGDVVDVIGISKGKGTQGAI 122

Query: 219 TRWGVTRLP----RKTHR--GLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYK 272
            R   +R P     K+HR  G R        +PARV       G+ G+   T  N KI K
Sbjct: 123 VRHNYSRGPMGHGSKSHRVAGARSAGS----YPARVFKGRKGFGKMGHDRVTVQNLKIVK 178

Query: 273 L 273
           +
Sbjct: 179 V 179


>gi|297588191|ref|ZP_06946835.1| 50S ribosomal protein L3 [Finegoldia magna ATCC 53516]
 gi|297574880|gb|EFH93600.1| 50S ribosomal protein L3 [Finegoldia magna ATCC 53516]
          Length = 209

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 98/241 (40%), Gaps = 72/241 (29%)

Query: 43  LTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSL 102
           + + LG K GMT I           ++  +   VT+IE  P+VV  +    K   G  ++
Sbjct: 1   MKSILGKKIGMTQI----------FNEDGSVVPVTVIEAGPMVVTQI--KTKEKEGYNAI 48

Query: 103 CTVWAQ----HLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCT 158
              + +    H+N+ +R  F K        +F K+ ++++  D                 
Sbjct: 49  QVGYIEKKEKHVNQPMRGHFGKAGV-----SFKKHLQEFKIGD----------------- 86

Query: 159 VIRKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVV 218
                    + Q N G               +I +D +FQ  +++D+IG++KGKG +G +
Sbjct: 87  ---------DQQFNLGD--------------EIKLD-IFQDGDVVDVIGISKGKGTQGSI 122

Query: 219 TRWGVTRLP----RKTHR--GLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYK 272
            R   +R P     K+HR  G R        +PARV      +G+ G+   T  N KI K
Sbjct: 123 VRHNYSRGPMGHGSKSHRVAGARSAGS----YPARVFKGRKGSGKMGHDRVTVQNLKIVK 178

Query: 273 L 273
           +
Sbjct: 179 V 179


>gi|281423839|ref|ZP_06254752.1| 50S ribosomal protein L3 [Prevotella oris F0302]
 gi|299141147|ref|ZP_07034284.1| 50S ribosomal protein L3 [Prevotella oris C735]
 gi|281402066|gb|EFB32897.1| 50S ribosomal protein L3 [Prevotella oris F0302]
 gi|298577107|gb|EFI48976.1| 50S ribosomal protein L3 [Prevotella oris C735]
          Length = 204

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 68/146 (46%), Gaps = 12/146 (8%)

Query: 136 KYETDDGKKDIQAQLEKMKKYCTVIRKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDA 195
           K E  DG K +Q   E+ K+     R    +M      G+  +K    + F E+    D 
Sbjct: 38  KTEEKDGYKALQLGFEEAKEN----RTSKPMMGTFKKAGTTPKKHLAEFKFDEEHNLGDT 93

Query: 196 V----FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG---LRKVACIGAW-HPAR 247
           +    F   + +DI+G +KGKG++GVV R G   + + TH      RK   IGA  +PA+
Sbjct: 94  ITVELFADAKFVDIVGTSKGKGFQGVVKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAK 153

Query: 248 VSFTVARAGQNGYHHRTEMNKKIYKL 273
           V   +  AGQ G    T  N ++ K+
Sbjct: 154 VFKGMRMAGQMGGDRVTTQNLQVLKV 179


>gi|332881056|ref|ZP_08448724.1| 50S ribosomal protein L3 [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332680968|gb|EGJ53897.1| 50S ribosomal protein L3 [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 205

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 10/120 (8%)

Query: 163 KAHLMEIQVNGGSVAQKVDFAYGFFEK-----QIPIDAVFQKDEMIDIIGVTKGKGYEGV 217
           KA L   +  G SV +KV    GF +       I +D  F + E +D+ G++KGKG++GV
Sbjct: 62  KAELGHFKKAGSSVKKKVIEFQGFEDNYKLGDTITVD-FFAEGEFVDVSGISKGKGFQGV 120

Query: 218 VTRWGVTRLPRKT---HRGLRKVACIGA-WHPARVSFTVARAGQNGYHHRTEMNKKIYKL 273
           V R G   + + T   H  LR    +GA  +P+RV   +  AG+ G    T  N K+ K+
Sbjct: 121 VRRHGFGGVGQTTHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGAEKVTVQNLKVLKV 180


>gi|386820890|ref|ZP_10108106.1| 50S ribosomal protein L3, bacterial [Joostella marina DSM 19592]
 gi|386425996|gb|EIJ39826.1| 50S ribosomal protein L3, bacterial [Joostella marina DSM 19592]
          Length = 205

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 4/81 (4%)

Query: 197 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT---HRGLRKVACIGAW-HPARVSFTV 252
           F + E ID+ G +KGKG++GVV R G   + + T   H  LR    IGA  +PARV   +
Sbjct: 100 FVEGEFIDVTGTSKGKGFQGVVKRHGFGGVGQSTHGQHNRLRAPGSIGAASYPARVFKGM 159

Query: 253 ARAGQNGYHHRTEMNKKIYKL 273
             AGQ G    T  N ++ K+
Sbjct: 160 RMAGQMGAERVTVQNLRVLKV 180


>gi|332798206|ref|YP_004459705.1| 50S ribosomal protein L3 [Tepidanaerobacter acetatoxydans Re1]
 gi|438001125|ref|YP_007270868.1| LSU ribosomal protein L3p (L3e) [Tepidanaerobacter acetatoxydans
           Re1]
 gi|332695941|gb|AEE90398.1| 50S ribosomal protein L3 [Tepidanaerobacter acetatoxydans Re1]
 gi|432177919|emb|CCP24892.1| LSU ribosomal protein L3p (L3e) [Tepidanaerobacter acetatoxydans
           Re1]
          Length = 211

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 86/238 (36%), Gaps = 71/238 (29%)

Query: 45  AFLGYKAGMTHIVRDVEKPGSKLHKKETCEA--VTIIETPPLVV-----VGVVGYVKTPR 97
           A LG K GMT I  D            T EA  VT++E  P +V     V   GY     
Sbjct: 5   AILGKKLGMTQIFSD------------TGEALPVTLVEAGPCLVIQKKTVNNDGYSAIKV 52

Query: 98  GLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYC 157
           G      +    LN+  + +F KN       AF +Y ++++  D  K           Y 
Sbjct: 53  GYED---IKENRLNKPQKGQFTKNQL-----AFKRYMREFKMQDADK-----------YN 93

Query: 158 TVIRKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGV 217
                KA                               +FQ  + +D+ G++KGKG+ G 
Sbjct: 94  VGDEIKAD------------------------------IFQPGDKVDVTGISKGKGFAGG 123

Query: 218 VTRWGVTRLPRKTHRGL--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKL 273
           + RW   R P   H  +  R+    GA  PARV     R G  G    T  N ++ K+
Sbjct: 124 IKRWNFKRGPM-AHGSMYHRRPGSGGATAPARVFKGNKRPGHLGAEKSTVQNLEVVKV 180


>gi|260061897|ref|YP_003194977.1| 50S ribosomal protein L3 [Robiginitalea biformata HTCC2501]
 gi|88786030|gb|EAR17199.1| 50S ribosomal protein L3 [Robiginitalea biformata HTCC2501]
          Length = 196

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 5/97 (5%)

Query: 182 FAYGFFEKQIPIDA-VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT---HRGLRKV 237
           F  G F+    I+  +F++ E +D+ G++KGKG++GVV R G   + + T   H  LR  
Sbjct: 75  FEEGAFKLGDTINVELFKEGEFVDVNGISKGKGFQGVVKRHGFGGVGQSTHGQHNRLRAP 134

Query: 238 ACIGAW-HPARVSFTVARAGQNGYHHRTEMNKKIYKL 273
             IGA   P+RV   +  AGQ G    T  N ++ K+
Sbjct: 135 GSIGAASDPSRVFKGMKMAGQMGNQRVTVQNLRVLKV 171


>gi|429753415|ref|ZP_19286222.1| 50S ribosomal protein L3 [Capnocytophaga sp. oral taxon 326 str.
           F0382]
 gi|429173696|gb|EKY15208.1| 50S ribosomal protein L3 [Capnocytophaga sp. oral taxon 326 str.
           F0382]
          Length = 205

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 59/120 (49%), Gaps = 10/120 (8%)

Query: 163 KAHLMEIQVNGGSVAQKVDFAYGF-----FEKQIPIDAVFQKDEMIDIIGVTKGKGYEGV 217
           KA L   +  G SV +KV    GF         I +D  F + E +DI G +KGKG++GV
Sbjct: 62  KAELGHFKKAGTSVKKKVVEFQGFENNYKLGDTITVD-FFTEGEFVDITGTSKGKGFQGV 120

Query: 218 VTRWGVTRLPRKT---HRGLRKVACIGA-WHPARVSFTVARAGQNGYHHRTEMNKKIYKL 273
           V R G   + + T   H  LR    +GA  +P+RV   +  AG+ G    T  N K+ K+
Sbjct: 121 VRRHGFGGVGQTTHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGAEKVTVQNLKVLKV 180


>gi|258648159|ref|ZP_05735628.1| 50S ribosomal protein L3 [Prevotella tannerae ATCC 51259]
 gi|260852040|gb|EEX71909.1| 50S ribosomal protein L3 [Prevotella tannerae ATCC 51259]
          Length = 206

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 4/87 (4%)

Query: 191 IPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG---LRKVACIGAW-HPA 246
           I +  VF+  E +D++G +KG G++GV+ R G   + + TH      RK   IGA  +PA
Sbjct: 95  ITVADVFEGVEYVDVVGTSKGHGFQGVMKRHGFGGVGQSTHGQDDRARKPGAIGACSYPA 154

Query: 247 RVSFTVARAGQNGYHHRTEMNKKIYKL 273
           +V   +  AGQ G    T  N K+ K+
Sbjct: 155 KVFKGMRMAGQMGNRRATNQNLKVIKV 181


>gi|304384275|ref|ZP_07366686.1| 50S ribosomal protein L3 [Prevotella marshii DSM 16973]
 gi|304334591|gb|EFM00873.1| 50S ribosomal protein L3 [Prevotella marshii DSM 16973]
          Length = 204

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 196 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG---LRKVACIGAW-HPARVSFT 251
           +F   E +D++G +KGKG++GVV R G   + + TH      RK   IGA  +PA+V   
Sbjct: 98  LFNDTEFVDVVGTSKGKGFQGVVKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKG 157

Query: 252 VARAGQNGYHHRTEMNKKIYKL 273
           +  AGQ G    T  N ++ K+
Sbjct: 158 MRMAGQMGGDRVTTQNLRVLKV 179


>gi|223983921|ref|ZP_03634081.1| hypothetical protein HOLDEFILI_01362 [Holdemania filiformis DSM
           12042]
 gi|223964113|gb|EEF68465.1| hypothetical protein HOLDEFILI_01362 [Holdemania filiformis DSM
           12042]
          Length = 230

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 7/90 (7%)

Query: 189 KQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAW----- 243
            ++ +D +F   E++D+ G +KG+GY G + R   T  P KTH G + +  IG+      
Sbjct: 94  NEVKVD-LFAAGEIVDVTGTSKGRGYNGTIVRNNATMGP-KTHGGSKNMRHIGSLATTGR 151

Query: 244 HPARVSFTVARAGQNGYHHRTEMNKKIYKL 273
           +  R+    A AGQ G +  T  N +I K+
Sbjct: 152 NNGRIEKGTAGAGQEGGYTTTTQNLEIIKV 181


>gi|384098721|ref|ZP_09999834.1| 50S ribosomal protein L3 [Imtechella halotolerans K1]
 gi|383835164|gb|EID74592.1| 50S ribosomal protein L3 [Imtechella halotolerans K1]
          Length = 205

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 4/81 (4%)

Query: 197 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT---HRGLRKVACIGAW-HPARVSFTV 252
           F + E ID+ G +KGKG++GVV R G   + + T   H  LR    IGA  +PARV   +
Sbjct: 100 FVEGEFIDVTGTSKGKGFQGVVKRHGFGGVGQSTHGQHNRLRAPGSIGAASYPARVFKGI 159

Query: 253 ARAGQNGYHHRTEMNKKIYKL 273
             AG+ G    T  N K+ K+
Sbjct: 160 RMAGRMGAEKVTVQNLKVLKV 180


>gi|381398001|ref|ZP_09923409.1| 50S ribosomal protein L3 [Microbacterium laevaniformans OR221]
 gi|380774667|gb|EIC07963.1| 50S ribosomal protein L3 [Microbacterium laevaniformans OR221]
          Length = 219

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 13/113 (11%)

Query: 165 HLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRW--- 221
           HL E++      A   D++ G   +++ +DA F+  +++D++G +KGKG  GV+ R    
Sbjct: 86  HLTEVRT-----ADAADYSLG---QELTVDATFEAGQLVDVVGTSKGKGTAGVMKRHNFK 137

Query: 222 GVTRLPRKTHRGLRKVACIGAWH-PARVSFTVARAGQNGYHHRTEMNKKIYKL 273
           GV+      HR  RK   IGA   P+RV   +  AG+ G    T +N  ++ +
Sbjct: 138 GVS-ASHGAHRNHRKPGSIGASSTPSRVFKGMRMAGRMGGERVTVLNLTVHAV 189


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.320    0.135    0.410 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,890,364,320
Number of Sequences: 23463169
Number of extensions: 203755962
Number of successful extensions: 460125
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1357
Number of HSP's successfully gapped in prelim test: 958
Number of HSP's that attempted gapping in prelim test: 456948
Number of HSP's gapped (non-prelim): 2397
length of query: 303
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 162
effective length of database: 9,050,888,538
effective search space: 1466243943156
effective search space used: 1466243943156
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 76 (33.9 bits)