Your job contains 1 sequence.
>022048
MGAPKQKWTQEEEAALKAGVIKHGAGKWRTILKDPEFSGVLYLRSNVDLKDKWRNMSVMS
NGWGSRDKSRLAVKRIPHIAKSEENSLALSSTIVQSDEEEIVDAKPLAVSGATPQIAAAP
KRSIVRLDNLIMEAITTLKEPGGSNKTTIAAYIEEKYWAPPDFKRLLSAKLKYLAGTGKL
VKIKRKYRIAPTLPFQDRRRNSMLLLEGRQRISHKVNNDDINVLTKSQIDLELAKLRSMT
PQEAAAAAARAVAEAEAAVAEAEEAAREADVAEADAEVAQAFAAAAMKTLKGRNNSQKMM
IRA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 022048
(303 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2031095 - symbol:TRB1 "telomere repeat binding... 818 1.5e-81 1
TAIR|locus:2158611 - symbol:TRB2 "AT5G67580" species:3702... 570 2.9e-55 1
TAIR|locus:2097325 - symbol:TRB3 "telomere repeat binding... 504 2.9e-48 1
TAIR|locus:2007878 - symbol:AT1G17520 species:3702 "Arabi... 339 8.8e-31 1
TAIR|locus:2030275 - symbol:AT1G72740 species:3702 "Arabi... 305 3.5e-27 1
TAIR|locus:2060984 - symbol:HIS1-3 "histone H1-3" species... 127 6.6e-08 1
TAIR|locus:2033118 - symbol:AT1G06760 species:3702 "Arabi... 143 8.0e-08 1
TAIR|locus:2064332 - symbol:AT2G30620 species:3702 "Arabi... 134 9.7e-07 1
TAIR|locus:2020193 - symbol:AT1G54260 species:3702 "Arabi... 127 1.6e-06 1
ZFIN|ZDB-GENE-090612-2 - symbol:terf1 "telomeric repeat b... 133 2.8e-06 1
TAIR|locus:2006862 - symbol:HMGA "high mobility group A" ... 120 1.7e-05 1
TAIR|locus:2030255 - symbol:TRFL6 "TRF-like 6" species:37... 123 8.6e-05 1
TAIR|locus:2038573 - symbol:HON5 "high mobility group A5"... 116 0.00036 1
RGD|1311574 - symbol:Terf1 "telomeric repeat binding fact... 115 0.00039 1
UNIPROTKB|G3X7V3 - symbol:TERF1 "Uncharacterized protein"... 114 0.00053 1
UNIPROTKB|Q15554 - symbol:TERF2 "Telomeric repeat-binding... 114 0.00065 1
UNIPROTKB|F1PBX6 - symbol:TERF2 "Uncharacterized protein"... 114 0.00066 1
UNIPROTKB|F1S2L2 - symbol:TERF2 "Uncharacterized protein"... 114 0.00073 1
UNIPROTKB|F1MMS4 - symbol:TERF2 "Uncharacterized protein"... 114 0.00074 1
UNIPROTKB|F1NSI5 - symbol:TERF2 "Telomeric repeat-binding... 115 0.00083 1
UNIPROTKB|Q9PU53 - symbol:TERF2 "Telomeric repeat-binding... 115 0.00083 1
TAIR|locus:2036174 - symbol:TRFL5 "TRF-like 5" species:37... 111 0.00098 1
>TAIR|locus:2031095 [details] [associations]
symbol:TRB1 "telomere repeat binding factor 1"
species:3702 "Arabidopsis thaliana" [GO:0000786 "nucleosome"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006334 "nucleosome assembly"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0009651 "response to salt stress"
evidence=IEP] [GO:0009723 "response to ethylene stimulus"
evidence=IEP] [GO:0009733 "response to auxin stimulus"
evidence=IEP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP] [GO:0009739 "response to gibberellin stimulus"
evidence=IEP] [GO:0009751 "response to salicylic acid stimulus"
evidence=IEP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IEP] [GO:0046686 "response to cadmium ion" evidence=IEP]
[GO:0003691 "double-stranded telomeric DNA binding" evidence=IDA]
[GO:0000911 "cytokinesis by cell plate formation" evidence=RCA]
[GO:0010413 "glucuronoxylan metabolic process" evidence=RCA]
[GO:0045492 "xylan biosynthetic process" evidence=RCA]
InterPro:IPR001005 InterPro:IPR005818 InterPro:IPR009057
Pfam:PF00249 Pfam:PF00538 PROSITE:PS51504 SMART:SM00526
SMART:SM00717 EMBL:CP002684 GO:GO:0009737 GO:GO:0046686
GO:GO:0009733 GO:GO:0009753 GO:GO:0005730 GO:GO:0009723
GO:GO:0009651 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 GO:GO:0003682 GO:GO:0009751 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009739 InterPro:IPR017930 PROSITE:PS51294
KO:K09422 GO:GO:0006334 GO:GO:0000786 EMBL:AC015445 GO:GO:0003691
EMBL:U83623 EMBL:U83624 EMBL:AY519539 EMBL:AY062736 EMBL:BT009677
EMBL:AY087994 IPI:IPI00542861 RefSeq:NP_564559.1 RefSeq:NP_849789.1
RefSeq:NP_973998.1 UniGene:At.27250 HSSP:P54274
ProteinModelPortal:Q8VWK4 SMR:Q8VWK4 IntAct:Q8VWK4
MINT:MINT-1212432 STRING:Q8VWK4 PRIDE:Q8VWK4
EnsemblPlants:AT1G49950.1 EnsemblPlants:AT1G49950.2
EnsemblPlants:AT1G49950.3 GeneID:841418 KEGG:ath:AT1G49950
TAIR:At1g49950 HOGENOM:HOG000238013 InParanoid:Q8VWK4 OMA:MANGWGS
PhylomeDB:Q8VWK4 ProtClustDB:CLSN2684376 Genevestigator:Q8VWK4
Uniprot:Q8VWK4
Length = 300
Score = 818 (293.0 bits), Expect = 1.5e-81, P = 1.5e-81
Identities = 174/307 (56%), Positives = 201/307 (65%)
Query: 1 MGAPKQKWTQEEEAALKAGVIKHGAGKWRTILKDPEFSGVLYLRSNVDLKDKWRNMSVMS 60
MGAPKQKWTQEEE+ALK+GVIKHG GKWRTILKDPEFSGVLYLRSNVDLKDKWRNMSVM+
Sbjct: 1 MGAPKQKWTQEEESALKSGVIKHGPGKWRTILKDPEFSGVLYLRSNVDLKDKWRNMSVMA 60
Query: 61 NGWGSRDKSRLAVKRIPHIAKSEENSLALSSTIVQSDEEEIVDAKPLAVSGATPQIAAAP 120
NGWGSR+KSRLAVKR + K EENSLAL++++ QSDEE + L VS P P
Sbjct: 61 NGWGSREKSRLAVKRTFSLPKQEENSLALTNSL-QSDEENVDATSGLQVSSNPP-----P 114
Query: 121 KRSIVRLDNLIMEAITTLKEPGGSNKTTIAAYIEEKYWAPPDFKRLLSAKLKYLAGTGKL 180
+R VRLD+LIMEAI TLKEPGG NKTTI AYIE++Y APPDFKRLLS KLKYL GKL
Sbjct: 115 RRPNVRLDSLIMEAIATLKEPGGCNKTTIGAYIEDQYHAPPDFKRLLSTKLKYLTSCGKL 174
Query: 181 VKIKRKYRIAPTLPFQDRRRNSMLLLEGRQRISH----KVNNDDINVLTKSQIDLELAKL 236
VK+KRKYRI + P RR + + G+QR S K + D++N T+SQID E+A++
Sbjct: 175 VKVKRKYRIPNSTPLSSHRRKGLGVFGGKQRTSSLPSPKTDIDEVNFQTRSQIDTEIARM 234
Query: 237 RSMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMKTLKGRNNS 296
+SM KTLKGRN
Sbjct: 235 KSMNVHEAAAVAAQAVAEAEAAMAEAEEAAKEAEAAEAEAEAAQAFAEEASKTLKGRNIC 294
Query: 297 QKMMIRA 303
KMMIRA
Sbjct: 295 -KMMIRA 300
>TAIR|locus:2158611 [details] [associations]
symbol:TRB2 "AT5G67580" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006334 "nucleosome assembly"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0003691
"double-stranded telomeric DNA binding" evidence=IDA] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043047
"single-stranded telomeric DNA binding" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0009651 "response to salt
stress" evidence=IEP] [GO:0009723 "response to ethylene stimulus"
evidence=IEP] [GO:0009733 "response to auxin stimulus"
evidence=IEP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP] [GO:0009739 "response to gibberellin stimulus"
evidence=IEP] [GO:0009751 "response to salicylic acid stimulus"
evidence=IEP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IEP] [GO:0046686 "response to cadmium ion" evidence=IEP]
[GO:0042162 "telomeric DNA binding" evidence=IDA]
InterPro:IPR001005 InterPro:IPR005818 InterPro:IPR009057
Pfam:PF00249 Pfam:PF00538 PROSITE:PS51504 SMART:SM00526
SMART:SM00717 GO:GO:0009737 GO:GO:0005634 EMBL:CP002688
GO:GO:0046686 GO:GO:0009733 GO:GO:0009753 GO:GO:0005730
GO:GO:0009723 GO:GO:0009651 GO:GO:0003700 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 GO:GO:0003682 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 InterPro:IPR017930
PROSITE:PS51294 KO:K09422 GO:GO:0006334 GO:GO:0000786 GO:GO:0043047
EMBL:AB013390 GO:GO:0003691 HSSP:P54274 HOGENOM:HOG000238013
ProtClustDB:CLSN2684376 EMBL:U83836 EMBL:U83837 EMBL:AY519545
EMBL:AY039883 EMBL:AY077668 IPI:IPI00536586 RefSeq:NP_201559.1
RefSeq:NP_851286.1 UniGene:At.28806 UniGene:At.7636
ProteinModelPortal:Q9FJW5 SMR:Q9FJW5 IntAct:Q9FJW5 STRING:Q9FJW5
EnsemblPlants:AT5G67580.1 EnsemblPlants:AT5G67580.2 GeneID:836894
KEGG:ath:AT5G67580 TAIR:At5g67580 InParanoid:Q9FJW5 OMA:DERAKPT
PhylomeDB:Q9FJW5 Genevestigator:Q9FJW5 Uniprot:Q9FJW5
Length = 299
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 121/242 (50%), Positives = 160/242 (66%)
Query: 1 MGAPKQKWTQEEEAALKAGVIKHGAGKWRTILKDPEFSGVLYLRSNVDLKDKWRNMSVMS 60
MGAPKQKWT EEEAALKAGV+KHG GKWRTIL D EFS +L RSNVDLKDKWRN+SV +
Sbjct: 1 MGAPKQKWTPEEEAALKAGVLKHGTGKWRTILSDTEFSLILKSRSNVDLKDKWRNISVTA 60
Query: 61 NGWGSRDKSRLAVKRIPHIAKSEENSLALSSTIVQSDEEEIVDAKPLAVSGATPQIAAAP 120
WGSR K++LA+KR P K ++N+ AL+ + +D+E P G +P+ A+
Sbjct: 61 L-WGSRKKAKLALKRTPPGTKQDDNNTALTIVALTNDDERAKPTSPGGSGGGSPRTCAS- 118
Query: 121 KRSIVRLDNLIMEAITTLKEPGGSNKTTIAAYIEEKYWAPPDFKRLLSAKLKYLAGTGKL 180
KRSI LD +I EAIT L+E GS++T+I YIEE + PP+ KR ++ +LK+L+ G L
Sbjct: 119 KRSITSLDKIIFEAITNLRELRGSDRTSIFLYIEENFKTPPNMKRHVAVRLKHLSSNGTL 178
Query: 181 VKIKRKYRIAPT-LPFQDRRRNSMLLLEGRQRISH-KVNNDDINVLTKSQIDLELAKLRS 238
VKIK KYR + +P R++ L LEG + K + N LTK ++D EL ++
Sbjct: 179 VKIKHKYRFSSNFIPAGARQKAPQLFLEGNNKKDPTKPEENGANSLTKFRVDGELYMIKG 238
Query: 239 MT 240
MT
Sbjct: 239 MT 240
>TAIR|locus:2097325 [details] [associations]
symbol:TRB3 "telomere repeat binding factor 3"
species:3702 "Arabidopsis thaliana" [GO:0000786 "nucleosome"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006334
"nucleosome assembly" evidence=IEA] [GO:0003691 "double-stranded
telomeric DNA binding" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0043047
"single-stranded telomeric DNA binding" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0009651 "response to salt
stress" evidence=IEP] [GO:0009723 "response to ethylene stimulus"
evidence=IEP] [GO:0009733 "response to auxin stimulus"
evidence=IEP] [GO:0009739 "response to gibberellin stimulus"
evidence=IEP] [GO:0009751 "response to salicylic acid stimulus"
evidence=IEP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IEP] [GO:0046686 "response to cadmium ion" evidence=IEP]
InterPro:IPR001005 InterPro:IPR005818 InterPro:IPR009057
Pfam:PF00249 Pfam:PF00538 PROSITE:PS51504 SMART:SM00526
SMART:SM00717 GO:GO:0046686 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009733 GO:GO:0009753 EMBL:AL132965 GO:GO:0005730
GO:GO:0009723 GO:GO:0009651 GO:GO:0003700 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 GO:GO:0003682 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 InterPro:IPR017930
PROSITE:PS51294 KO:K09422 GO:GO:0006334 GO:GO:0000786 GO:GO:0043047
GO:GO:0003691 HSSP:P54274 HOGENOM:HOG000238013
ProtClustDB:CLSN2684376 EMBL:U83838 EMBL:U83839 EMBL:AY519542
EMBL:AY058887 EMBL:AY065069 EMBL:AY079043 IPI:IPI00527572
PIR:T46051 RefSeq:NP_190554.1 UniGene:At.26646
ProteinModelPortal:Q9M2X3 SMR:Q9M2X3 IntAct:Q9M2X3
MINT:MINT-1212448 STRING:Q9M2X3 EnsemblPlants:AT3G49850.1
GeneID:824147 KEGG:ath:AT3G49850 TAIR:At3g49850 eggNOG:NOG264278
InParanoid:Q9M2X3 OMA:PPAGSCE PhylomeDB:Q9M2X3
Genevestigator:Q9M2X3 Uniprot:Q9M2X3
Length = 295
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 119/298 (39%), Positives = 161/298 (54%)
Query: 1 MGAPKQKWTQEEEAALKAGVIKHGAGKWRTILKDPEFSGVLYLRSNVDLKDKWRNMSVMS 60
MGAPK KWT EEE ALKAGV+KHG GKWRTIL DP +S +L RSNVDLKDKWRN+SV +
Sbjct: 1 MGAPKLKWTPEEETALKAGVLKHGTGKWRTILSDPVYSTILKSRSNVDLKDKWRNISVTA 60
Query: 61 NGWGSRDKSRLAVKRIPHIAKSEENSLALSSTIVQSDEEEIVDAKPLAVSGATPQIAAAP 120
WGSR K++LA+KR P ++ S ++ A + TIV ++ + A S P + P
Sbjct: 61 L-WGSRKKAKLALKRTP-LSGSRQDDNATAITIVSLANGDVGGQQIDAPS--PPAGSCEP 116
Query: 121 KRSIVRLDNLIMEAITTLKEPGGSNKTTIAAYIEEKYWAPPDFKRLLSAKLKYLAGTGKL 180
R +D +I+EAIT+LK P G + +I YIEE + PD KRL++++LKYL G L
Sbjct: 117 PRPSTSVDKIILEAITSLKRPFGPDGKSILMYIEENFKMQPDMKRLVTSRLKYLTNVGTL 176
Query: 181 VKIKRKYRIAPTLPFQ-DRRRNSMLLLEGRQRISHKVNNDDINVLTKSQIDLELAKLRSM 239
VK K KYRI+ + + +R+ LLLEG + + K + + LTKSQ+ E+ + M
Sbjct: 177 VKKKHKYRISQNYMAEGEGQRSPQLLLEGNKENTPKPEENGVKNLTKSQVGGEVM-IMGM 235
Query: 240 TPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMKTLKGRNNSQ 297
T MK +K R +SQ
Sbjct: 236 TEKEAAAAAARAVAEAEFAMAEAEEAAREADKAEAEAEAAHIFAKAAMKAVKYRMHSQ 293
>TAIR|locus:2007878 [details] [associations]
symbol:AT1G17520 species:3702 "Arabidopsis thaliana"
[GO:0000786 "nucleosome" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0009723
"response to ethylene stimulus" evidence=IEP] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0009751 "response to salicylic
acid stimulus" evidence=IEP] [GO:0009753 "response to jasmonic acid
stimulus" evidence=IEP] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] InterPro:IPR001005 InterPro:IPR005818
InterPro:IPR009057 Pfam:PF00249 Pfam:PF00538 PROSITE:PS51504
SMART:SM00526 SMART:SM00717 EMBL:CP002684 GO:GO:0005634
GO:GO:0046686 GO:GO:0009733 GO:GO:0009753 GO:GO:0009723
GO:GO:0003677 GO:GO:0009651 GO:GO:0003700 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 GO:GO:0003682 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AC022492 InterPro:IPR017930
PROSITE:PS51294 KO:K09422 GO:GO:0006334 GO:GO:0000786
HOGENOM:HOG000238013 EMBL:AY519538 EMBL:AK118533 EMBL:BT005290
IPI:IPI00518720 IPI:IPI00524616 RefSeq:NP_173195.2 UniGene:At.41830
ProteinModelPortal:F4I7L1 SMR:F4I7L1 EnsemblPlants:AT1G17520.1
GeneID:838326 KEGG:ath:AT1G17520 TAIR:At1g17520 PhylomeDB:F4I7L1
Uniprot:F4I7L1
Length = 296
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 86/233 (36%), Positives = 126/233 (54%)
Query: 1 MGAPKQKWTQEEEAALKAGVIKHGAGKWRTILKDPEFSGVLYLRSNVDLKDKWRNMSVMS 60
MG K KWT EEE AL AGV KHG GKW+ IL+DPE + L RSN+DLKDKWRN+SV
Sbjct: 1 MGNQKLKWTAEEEEALLAGVRKHGPGKWKNILRDPELAEQLSSRSNIDLKDKWRNLSVAP 60
Query: 61 NGWGSRDKSRLA-VKRIP-HIAKSEENSLALSSTIVQSDEEEIVD---AKPLAVSGATPQ 115
GS+DK R +K H+A + ++ + S + + L++ +
Sbjct: 61 GIQGSKDKIRTPKIKAAAFHLAAAAAAAIVTPTHSGHSSPVATLPRSGSSDLSIDDSF-N 119
Query: 116 IAAAPKRSIVRLDNLIMEAITTLKEPGGSNKTTIAAYIEEKYWAPPDFKRLLSAKLKYLA 175
I A PK + R D +I EA++ L + GS+ + I +IE++ PP+F+R+LS++L+ LA
Sbjct: 120 IVADPKNA-PRYDGMIFEALSNLTDANGSDVSAIFNFIEQRQEVPPNFRRMLSSRLRRLA 178
Query: 176 GTGKLVKIKRKYRIAPTLPFQDRRRNSMLLLEGRQRISHKVNNDDINVLTKSQ 228
GKL K+ + T F NS++ QR H + N ++ Q
Sbjct: 179 AQGKLEKVSH---LKSTQNFYKMNDNSLV-----QRTPHVARPKESNTKSRQQ 223
>TAIR|locus:2030275 [details] [associations]
symbol:AT1G72740 species:3702 "Arabidopsis thaliana"
[GO:0000786 "nucleosome" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0006334 "nucleosome assembly" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR001005 InterPro:IPR005818
InterPro:IPR009057 Pfam:PF00249 Pfam:PF00538 PROSITE:PS51504
SMART:SM00526 SMART:SM00717 EMBL:CP002684 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AC010926 InterPro:IPR017930 PROSITE:PS51294 GO:GO:0006334
GO:GO:0000786 HOGENOM:HOG000238013 EMBL:AF372925 EMBL:AY124849
IPI:IPI00543298 IPI:IPI00846964 PIR:C96752 RefSeq:NP_177418.2
UniGene:At.19127 ProteinModelPortal:F4IEY4 SMR:F4IEY4 PRIDE:F4IEY4
EnsemblPlants:AT1G72740.1 GeneID:843606 KEGG:ath:AT1G72740
TAIR:At1g72740 OMA:IEPRHEV Uniprot:F4IEY4
Length = 287
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 72/185 (38%), Positives = 102/185 (55%)
Query: 1 MGAPKQKWTQEEEAALKAGVIKHGAGKWRTILKDPEFSGVLYLRSNVDLKDKWRNMSVMS 60
MG K KWT EEE AL AG+ KHG GKW+ IL+DPEF+ L RSN+DLKDKWRN+SV
Sbjct: 1 MGNQKLKWTAEEEEALLAGIRKHGPGKWKNILRDPEFADQLIHRSNIDLKDKWRNLSVPP 60
Query: 61 NGWGSRDKSRLAVKRIPHIAKSEENSLALSSTIVQSDEEEIVDAKPLAVSGATPQ--IAA 118
+K+R P K E ++ A + + I P P I
Sbjct: 61 GTQSLTNKAR------PAKVKEEGDTPAADANDAVTIPRPIPTIPPPPGRRTLPSELIPD 114
Query: 119 APKRSIVRLDNLIMEAITTLKEPGGSNKTTIAAYIEEKYWAPPDFKRLLSAKLKYLAGTG 178
++ R D +I EA++ L + GS+ ++I +IE ++ PP+F+R+LS +L+ LA
Sbjct: 115 ENTKNAPRYDGVIFEALSALADGNGSDVSSIYHFIEPRHEVPPNFRRILSTRLRRLAAQS 174
Query: 179 KLVKI 183
KL K+
Sbjct: 175 KLEKV 179
>TAIR|locus:2060984 [details] [associations]
symbol:HIS1-3 "histone H1-3" species:3702 "Arabidopsis
thaliana" [GO:0000786 "nucleosome" evidence=IEA;ISS] [GO:0003677
"DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006334 "nucleosome assembly"
evidence=IEA;ISS] [GO:0009414 "response to water deprivation"
evidence=IEP] [GO:0031492 "nucleosomal DNA binding" evidence=ISS]
InterPro:IPR005818 InterPro:IPR005819 Pfam:PF00538 PRINTS:PR00624
PROSITE:PS51504 SMART:SM00526 GO:GO:0005634 EMBL:CP002685
GO:GO:0009414 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006334
GO:GO:0000786 GO:GO:0031492 EMBL:AC006201 KO:K11275 EMBL:U72241
EMBL:U73781 EMBL:AY045797 EMBL:AY079414 EMBL:AY084603
IPI:IPI00539258 PIR:F84559 RefSeq:NP_179396.1 UniGene:At.24439
ProteinModelPortal:P94109 SMR:P94109 STRING:P94109
EnsemblPlants:AT2G18050.1 GeneID:816317 KEGG:ath:AT2G18050
TAIR:At2g18050 eggNOG:NOG258576 HOGENOM:HOG000241672
InParanoid:P94109 OMA:ARQPKSI PhylomeDB:P94109
ProtClustDB:CLSN2683930 ArrayExpress:P94109 Genevestigator:P94109
Uniprot:P94109
Length = 167
Score = 127 (49.8 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 35/106 (33%), Positives = 54/106 (50%)
Query: 98 EEEIVDAKPLAVSGATPQIAAAPKRSIVRLDNLIMEAITTLKEPGGSNKTTIAAYIEEKY 157
E++I+ P A P+ P +I EA+ LKE GS+ IA IEEK+
Sbjct: 3 EDKILKKTPAAKKPRKPKTTTHPPYF-----QMIKEALMVLKEKNGSSPYAIAKKIEEKH 57
Query: 158 WA--PPDFKRLLSAKLKYLAGTGKLVKIKRKYRIAPTLPFQDRRRN 201
+ P F++ LS +LK GKLVKI+ Y+++ T R+++
Sbjct: 58 KSLLPESFRKTLSLQLKNSVAKGKLVKIRASYKLSDTTKMITRQQD 103
>TAIR|locus:2033118 [details] [associations]
symbol:AT1G06760 species:3702 "Arabidopsis thaliana"
[GO:0000786 "nucleosome" evidence=IEA;ISS] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006334 "nucleosome assembly" evidence=IEA;ISS]
InterPro:IPR005818 InterPro:IPR005819 Pfam:PF00538 PRINTS:PR00624
PROSITE:PS51504 SMART:SM00526 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006334 GO:GO:0000786
EMBL:AC011001 KO:K11275 eggNOG:NOG126832 EMBL:X62458 EMBL:X62456
EMBL:AF428314 EMBL:AY050452 EMBL:AY097352 EMBL:AY086374
IPI:IPI00547445 PIR:S19698 RefSeq:NP_172161.1 UniGene:At.23323
UniGene:At.48159 ProteinModelPortal:P26568 SMR:P26568 STRING:P26568
PaxDb:P26568 PRIDE:P26568 EnsemblPlants:AT1G06760.1 GeneID:837187
KEGG:ath:AT1G06760 TAIR:At1g06760 HOGENOM:HOG000240494
InParanoid:P26568 OMA:AATIEGN ProtClustDB:CLSN2914236
Genevestigator:P26568 GermOnline:AT1G06760 Uniprot:P26568
Length = 274
Score = 143 (55.4 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 34/79 (43%), Positives = 49/79 (62%)
Query: 116 IAAAPKRSIVR----LDNLIMEAITTLKEPGGSNKTTIAAYIEEKYWA-PPDFKRLLSAK 170
+AAAPK+ V + +I +AI TLKE GS++ I +IEEK PP F++LL
Sbjct: 50 VAAAPKKRTVSSHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKRKELPPTFRKLLLLN 109
Query: 171 LKYLAGTGKLVKIKRKYRI 189
LK L +GKLVK+K +++
Sbjct: 110 LKRLVASGKLVKVKASFKL 128
>TAIR|locus:2064332 [details] [associations]
symbol:AT2G30620 species:3702 "Arabidopsis thaliana"
[GO:0000786 "nucleosome" evidence=IEA;ISS] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS] [GO:0006334 "nucleosome assembly"
evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005739
"mitochondrion" evidence=IDA] InterPro:IPR005818 InterPro:IPR005819
Pfam:PF00538 PRINTS:PR00624 PROSITE:PS51504 SMART:SM00526
GO:GO:0005739 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005730
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006334
GO:GO:0000786 EMBL:U93215 KO:K11275 eggNOG:NOG126832
HOGENOM:HOG000240494 EMBL:X62459 EMBL:AF360211 EMBL:AY040059
EMBL:AY085789 IPI:IPI00532307 PIR:S19699 RefSeq:NP_180620.1
UniGene:At.20406 ProteinModelPortal:P26569 STRING:P26569
PaxDb:P26569 PRIDE:P26569 EnsemblPlants:AT2G30620.1 GeneID:817612
KEGG:ath:AT2G30620 TAIR:At2g30620 InParanoid:P26569 OMA:KVAVTKK
ProtClustDB:CLSN2912930 Genevestigator:P26569 GermOnline:AT2G30620
Uniprot:P26569
Length = 273
Score = 134 (52.2 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 41/112 (36%), Positives = 62/112 (55%)
Query: 90 SSTIVQSDEEEIV----DAKPLAVSGAT--PQIAAAPKR-----SIVRLDNLIMEAITTL 138
+ T V+S E++ +K + AT P AAAP + S + +I +AI TL
Sbjct: 17 ADTTVKSPEKKPAAKGGKSKKTTTAKATKKPVKAAAPTKKKTTSSHPTYEEMIKDAIVTL 76
Query: 139 KEPGGSNKTTIAAYIEEKYWA-PPDFKRLLSAKLKYLAGTGKLVKIKRKYRI 189
KE GS++ I +IEEK+ + PP F++LL LK L + KLVK+K ++I
Sbjct: 77 KERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLVKVKASFKI 128
>TAIR|locus:2020193 [details] [associations]
symbol:AT1G54260 species:3702 "Arabidopsis thaliana"
[GO:0000786 "nucleosome" evidence=IEA;ISS] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006334 "nucleosome assembly" evidence=IEA;ISS]
InterPro:IPR005818 Pfam:PF00538 PROSITE:PS51504 SMART:SM00526
EMBL:CP002684 GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006334 GO:GO:0000786 IPI:IPI00541984
RefSeq:NP_175828.1 UniGene:At.50951 ProteinModelPortal:F4HV94
EnsemblPlants:AT1G54260.1 GeneID:841867 KEGG:ath:AT1G54260
OMA:EESHTML Uniprot:F4HV94
Length = 197
Score = 127 (49.8 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 25/67 (37%), Positives = 41/67 (61%)
Query: 126 RLDNLIMEAITTLKEPGGSNKTTIAAYIEEKYWAPPDFKRLLSAKLKYLAGTGKLVKIKR 185
R D ++ EA++T+ + GSN I +IE ++ P +FK+LLS L L KL K++
Sbjct: 6 RYDAMVFEAVSTINDENGSNLKEILRFIEGQHEVPQNFKKLLSYSLGILVSQDKLKKVRN 65
Query: 186 KYRIAPT 192
+Y+I+ T
Sbjct: 66 RYKISVT 72
>ZFIN|ZDB-GENE-090612-2 [details] [associations]
symbol:terf1 "telomeric repeat binding factor
(NIMA-interacting) 1" species:7955 "Danio rerio" [GO:0042162
"telomeric DNA binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000723 "telomere maintenance" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0000781
"chromosome, telomeric region" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057
InterPro:IPR013867 InterPro:IPR017357 Pfam:PF00249 Pfam:PF08558
PIRSF:PIRSF038016 ProDom:PD014243 SMART:SM00717
ZFIN:ZDB-GENE-090612-2 GO:GO:0005634 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
PROSITE:PS51294 GO:GO:0000781 GO:GO:0000723 GO:GO:0042162
Gene3D:1.25.40.210 SUPFAM:SSF63600 GeneTree:ENSGT00530000063796
EMBL:CR759896 EMBL:CR318587 IPI:IPI00482159
Ensembl:ENSDART00000106008 ArrayExpress:F1R8I5 Bgee:F1R8I5
Uniprot:F1R8I5
Length = 386
Score = 133 (51.9 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 26/50 (52%), Positives = 33/50 (66%)
Query: 5 KQKWTQEEEAALKAGVIKHGAGKWRTILKDPEFSGVLYLRSNVDLKDKWR 54
++KWT E+ LKAGV KHG GKW IL D +F R+ V+LKD+WR
Sbjct: 332 RKKWTDVEDKKLKAGVKKHGVGKWSKILNDFDFDN----RTTVNLKDRWR 377
>TAIR|locus:2006862 [details] [associations]
symbol:HMGA "high mobility group A" species:3702
"Arabidopsis thaliana" [GO:0000785 "chromatin" evidence=IEA]
[GO:0000786 "nucleosome" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0006334 "nucleosome assembly" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0001708 "cell fate
specification" evidence=RCA] [GO:0008283 "cell proliferation"
evidence=RCA] InterPro:IPR000116 InterPro:IPR005818
InterPro:IPR017956 Pfam:PF00538 Pfam:PF02178 PRINTS:PR00930
PROSITE:PS51504 SMART:SM00384 SMART:SM00526 EMBL:CP002684
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 InterPro:IPR020478
PRINTS:PR00929 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006334
GO:GO:0000786 EMBL:AC006917 EMBL:AF041253 EMBL:BT004806
EMBL:AK317240 EMBL:X99116 IPI:IPI00519692 RefSeq:NP_172943.1
UniGene:At.5361 ProteinModelPortal:Q43386 SMR:Q43386 IntAct:Q43386
STRING:Q43386 PRIDE:Q43386 EnsemblPlants:AT1G14900.1 GeneID:838055
KEGG:ath:AT1G14900 TAIR:At1g14900 InParanoid:Q43386 OMA:MVKNNYM
ProtClustDB:CLSN2912857 Genevestigator:Q43386 Uniprot:Q43386
Length = 204
Score = 120 (47.3 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 28/69 (40%), Positives = 38/69 (55%)
Query: 120 PKRSIVRLDNLIMEAITTLKEPGGSNKTTIAAYIEE-KYWAPPDFKRLLSAKLKYLAGTG 178
P S+ +IMEAI +L + G NKTTIA +IE + PP LLS L + TG
Sbjct: 19 PSFSLPPYPQMIMEAIESLNDKNGCNKTTIAKHIESTQQTLPPSHMTLLSYHLNQMKKTG 78
Query: 179 KLVKIKRKY 187
+L+ +K Y
Sbjct: 79 QLIMVKNNY 87
>TAIR|locus:2030255 [details] [associations]
symbol:TRFL6 "TRF-like 6" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009651
"response to salt stress" evidence=IEP] [GO:0046686 "response to
cadmium ion" evidence=IEP] [GO:0000956 "nuclear-transcribed mRNA
catabolic process" evidence=RCA] [GO:0010048 "vernalization
response" evidence=RCA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=RCA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 EMBL:CP002684
GO:GO:0046686 GO:GO:0003677 GO:GO:0009651 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
PROSITE:PS51294 IPI:IPI00532857 RefSeq:NP_974133.1 UniGene:At.26165
ProteinModelPortal:F4IDF1 SMR:F4IDF1 PRIDE:F4IDF1
EnsemblPlants:AT1G72650.2 GeneID:843597 KEGG:ath:AT1G72650
OMA:AGKWSEI Uniprot:F4IDF1
Length = 630
Score = 123 (48.4 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 28/49 (57%), Positives = 32/49 (65%)
Query: 8 WTQEEEAALKAGVIKHGAGKWRTILKDPEFSGVLYLRSNVDLKDKWRNM 56
WT E A L GV K+GAGKW I K FS Y R++VDLKDKWRN+
Sbjct: 543 WTLSEIAKLVEGVSKYGAGKWSEIKKHL-FSSHSY-RTSVDLKDKWRNL 589
>TAIR|locus:2038573 [details] [associations]
symbol:HON5 "high mobility group A5" species:3702
"Arabidopsis thaliana" [GO:0000786 "nucleosome" evidence=IEA;ISS]
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0006334 "nucleosome assembly"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0009294 "DNA mediated
transformation" evidence=IMP] InterPro:IPR005818 InterPro:IPR017956
Pfam:PF00538 PROSITE:PS51504 SMART:SM00384 SMART:SM00526
EMBL:CP002684 GO:GO:0009507 GO:GO:0005730 GO:GO:0003677
InterPro:IPR020478 PRINTS:PR00929 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006334 GO:GO:0009294 GO:GO:0000786
EMBL:BT023425 EMBL:BT025318 IPI:IPI00521518 RefSeq:NP_175295.1
UniGene:At.22179 UniGene:At.67786 ProteinModelPortal:Q4V3D1
SMR:Q4V3D1 STRING:Q4V3D1 PaxDb:Q4V3D1 PRIDE:Q4V3D1 ProMEX:Q4V3D1
EnsemblPlants:AT1G48620.1 GeneID:841283 KEGG:ath:AT1G48620
TAIR:At1g48620 eggNOG:NOG264517 InParanoid:Q4V3D1 OMA:RYIERIY
PhylomeDB:Q4V3D1 ProtClustDB:CLSN2682431 Genevestigator:Q4V3D1
Uniprot:Q4V3D1
Length = 479
Score = 116 (45.9 bits), Expect = 0.00036, P = 0.00036
Identities = 31/85 (36%), Positives = 43/85 (50%)
Query: 114 PQIAAAPKRSIVR---LDNLIMEAITTLKEPGGSNKTTIAAYIEEKYWA-PPDFKRLLSA 169
PQ + P + ++I AI L EP GS+K I+ YIE Y P LL+
Sbjct: 62 PQTSPVPPHPSISHPPYSDMICTAIAALNEPDGSSKQAISRYIERIYTGIPTAHGALLTH 121
Query: 170 KLKYLAGTGKLVKIKRKYRIAPTLP 194
LK L +G LV +K+ Y++A T P
Sbjct: 122 HLKTLKTSGILVMVKKSYKLASTPP 146
>RGD|1311574 [details] [associations]
symbol:Terf1 "telomeric repeat binding factor (NIMA-interacting)
1" species:10116 "Rattus norvegicus" [GO:0000086 "G2/M transition
of mitotic cell cycle" evidence=ISO] [GO:0000781 "chromosome,
telomeric region" evidence=ISO] [GO:0000783 "nuclear telomere cap
complex" evidence=IEA;ISO] [GO:0000784 "nuclear chromosome,
telomeric region" evidence=ISO] [GO:0001309 "age-dependent telomere
shortening" evidence=IEA;ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003691 "double-stranded telomeric DNA binding"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005819 "spindle" evidence=IEA;ISO] [GO:0006917 "induction of
apoptosis" evidence=IEA;ISO] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0007004 "telomere maintenance via telomerase"
evidence=ISO] [GO:0007094 "mitotic spindle assembly checkpoint"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008156 "negative regulation of DNA
replication" evidence=ISO] [GO:0008301 "DNA binding, bending"
evidence=IEA;ISO] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA;ISO]
[GO:0010521 "telomerase inhibitor activity" evidence=IEA;ISO]
[GO:0010834 "telomere maintenance via telomere shortening"
evidence=ISO] [GO:0031116 "positive regulation of microtubule
polymerization" evidence=IEA;ISO] [GO:0032211 "negative regulation
of telomere maintenance via telomerase" evidence=IEA;ISO]
[GO:0042162 "telomeric DNA binding" evidence=ISO] [GO:0042493
"response to drug" evidence=IEP] [GO:0042803 "protein
homodimerization activity" evidence=IEA;ISO] [GO:0045840 "positive
regulation of mitosis" evidence=IEA;ISO] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA;ISO] [GO:0046982
"protein heterodimerization activity" evidence=IEA;ISO] [GO:0051260
"protein homooligomerization" evidence=IEA;ISO] [GO:0051974
"negative regulation of telomerase activity" evidence=ISO]
InterPro:IPR001005 InterPro:IPR009057 InterPro:IPR013867
InterPro:IPR017357 Pfam:PF00249 Pfam:PF08558 PIRSF:PIRSF038016
ProDom:PD014243 SMART:SM00717 RGD:1311574 GO:GO:0005634
GO:GO:0000086 GO:GO:0006917 GO:GO:0007094 GO:GO:0005819
GO:GO:0042493 GO:GO:0045931 GO:GO:0051260 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0008301 GO:GO:0000783
GO:GO:0032211 GO:GO:0045840 GO:GO:0008656 GO:GO:0031116
InterPro:IPR017930 PROSITE:PS51294 EMBL:CH473984 GO:GO:0010521
GO:GO:0003691 HOVERGEN:HBG054097 Gene3D:1.25.40.210 SUPFAM:SSF63600
CTD:7013 eggNOG:NOG72230 HOGENOM:HOG000132847 KO:K11110
GO:GO:0001309 GeneTree:ENSGT00530000063796 EMBL:BC089888
IPI:IPI00569734 RefSeq:NP_001012482.1 UniGene:Rn.33853 SMR:Q5EB98
STRING:Q5EB98 Ensembl:ENSRNOT00000049741 GeneID:297758
KEGG:rno:297758 UCSC:RGD:1311574 InParanoid:Q5EB98 OMA:NFKEAEV
OrthoDB:EOG45HRXH NextBio:642619 Genevestigator:Q5EB98
Uniprot:Q5EB98
Length = 421
Score = 115 (45.5 bits), Expect = 0.00039, P = 0.00039
Identities = 24/52 (46%), Positives = 32/52 (61%)
Query: 5 KQKWTQEEEAALKAGVIKHGAGKWRTILKDPEFSGVLYLRSNVDLKDKWRNM 56
KQ W EE+ +LK GV K+G G W IL +F+ R++V LKD+WR M
Sbjct: 367 KQTWLWEEDRSLKCGVRKYGEGNWAKILSHYKFNN----RTSVMLKDRWRTM 414
>UNIPROTKB|G3X7V3 [details] [associations]
symbol:TERF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051260 "protein homooligomerization" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IEA] [GO:0045840 "positive regulation of mitosis"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0032211 "negative regulation of telomere
maintenance via telomerase" evidence=IEA] [GO:0031116 "positive
regulation of microtubule polymerization" evidence=IEA] [GO:0010521
"telomerase inhibitor activity" evidence=IEA] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IEA] [GO:0008301 "DNA binding, bending"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0007094 "mitotic spindle assembly checkpoint" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IEA] [GO:0005819
"spindle" evidence=IEA] [GO:0003691 "double-stranded telomeric DNA
binding" evidence=IEA] [GO:0001309 "age-dependent telomere
shortening" evidence=IEA] [GO:0000783 "nuclear telomere cap
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057
InterPro:IPR013867 InterPro:IPR017357 Pfam:PF00249 Pfam:PF08558
PIRSF:PIRSF038016 ProDom:PD014243 SMART:SM00717 GO:GO:0000086
GO:GO:0006917 GO:GO:0007094 GO:GO:0005819 GO:GO:0045931
GO:GO:0051260 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0008301 GO:GO:0000783 GO:GO:0032211 GO:GO:0045840
GO:GO:0008656 GO:GO:0031116 InterPro:IPR017930 PROSITE:PS51294
GO:GO:0010521 GO:GO:0003691 Gene3D:1.25.40.210 SUPFAM:SSF63600
OMA:AYQLRTV GO:GO:0001309 GeneTree:ENSGT00530000063796
EMBL:DAAA02038833 UniGene:Bt.23286 Ensembl:ENSBTAT00000046824
Uniprot:G3X7V3
Length = 436
Score = 114 (45.2 bits), Expect = 0.00053, P = 0.00053
Identities = 24/52 (46%), Positives = 32/52 (61%)
Query: 5 KQKWTQEEEAALKAGVIKHGAGKWRTILKDPEFSGVLYLRSNVDLKDKWRNM 56
KQ W EE+ L++GV K+G G W IL EF+ R++V LKD+WR M
Sbjct: 377 KQAWLWEEDKNLRSGVRKYGEGNWSKILSHYEFNN----RTSVMLKDRWRTM 424
>UNIPROTKB|Q15554 [details] [associations]
symbol:TERF2 "Telomeric repeat-binding factor 2"
species:9606 "Homo sapiens" [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0001673
"male germ cell nucleus" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0032206 "positive
regulation of telomere maintenance" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0032205 "negative regulation of telomere maintenance"
evidence=IDA] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0000781 "chromosome, telomeric region"
evidence=IDA] [GO:0000723 "telomere maintenance" evidence=IMP;TAS]
[GO:0042162 "telomeric DNA binding" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0032214 "negative regulation of
telomere maintenance via semi-conservative replication"
evidence=NAS] [GO:0030870 "Mre11 complex" evidence=IDA] [GO:0031627
"telomeric loop formation" evidence=IDA] [GO:0031848 "protection
from non-homologous end joining at telomere" evidence=IMP]
[GO:0070198 "protein localization to chromosome, telomeric region"
evidence=IMP] [GO:0000783 "nuclear telomere cap complex"
evidence=IDA] [GO:0016233 "telomere capping" evidence=IMP]
[GO:0010834 "telomere maintenance via telomere shortening"
evidence=IMP] [GO:0007004 "telomere maintenance via telomerase"
evidence=IC] [GO:0001309 "age-dependent telomere shortening"
evidence=NAS] [GO:0090398 "cellular senescence" evidence=NAS]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0003691 "double-stranded telomeric DNA binding" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
InterPro:IPR001005 InterPro:IPR009057 InterPro:IPR013867
InterPro:IPR017357 Pfam:PF00249 Pfam:PF08558 PIRSF:PIRSF038016
ProDom:PD014243 SMART:SM00717 GO:GO:0005794
Pathway_Interaction_DB:telomerasepathway Reactome:REACT_115566
GO:GO:0005654 GO:GO:0001701 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0007049 Reactome:REACT_111183 GO:GO:0000783
GO:GO:0031848 GO:GO:0070198 GO:GO:0001673 InterPro:IPR017930
PROSITE:PS51294 GO:GO:0007004 GO:GO:0090398 GO:GO:0032206
GO:GO:0031627 PDB:3BUA PDBsum:3BUA GO:GO:0003691 PDB:3K6G
PDBsum:3K6G Gene3D:1.25.40.210 SUPFAM:SSF63600 GO:GO:0001309
GO:GO:0032214 eggNOG:NOG44337 OrthoDB:EOG4TB4CV EMBL:AF002999
EMBL:BC024890 EMBL:U95970 EMBL:X93512 IPI:IPI00024214
IPI:IPI00216552 PIR:S67923 UniGene:Hs.63335 PDB:1H6P PDB:1VF9
PDB:1VFC PDB:1W0U PDB:1XG1 PDB:3BU8 PDB:3SJM PDBsum:1H6P
PDBsum:1VF9 PDBsum:1VFC PDBsum:1W0U PDBsum:1XG1 PDBsum:3BU8
PDBsum:3SJM ProteinModelPortal:Q15554 SMR:Q15554 DIP:DIP-34052N
IntAct:Q15554 MINT:MINT-2831307 STRING:Q15554 PhosphoSite:Q15554
DMDM:21542277 PaxDb:Q15554 PRIDE:Q15554 Ensembl:ENST00000254942
Ensembl:ENST00000567296 KEGG:hsa:7014 UCSC:uc002exd.3
UCSC:uc002exe.3 CTD:7014 GeneCards:GC16M069389 HGNC:HGNC:11729
HPA:CAB010451 HPA:HPA001907 HPA:HPA002735 MIM:602027
neXtProt:NX_Q15554 PharmGKB:PA36446 HOGENOM:HOG000154547
HOVERGEN:HBG108560 InParanoid:Q15554 KO:K11111 OMA:ITKKQKW
PhylomeDB:Q15554 ChiTaRS:TERF2 EvolutionaryTrace:Q15554
GenomeRNAi:7014 NextBio:27401 Bgee:Q15554 CleanEx:HS_TERF2
Genevestigator:Q15554 GermOnline:ENSG00000132604 Uniprot:Q15554
Length = 500
Score = 114 (45.2 bits), Expect = 0.00065, P = 0.00065
Identities = 25/52 (48%), Positives = 31/52 (59%)
Query: 5 KQKWTQEEEAALKAGVIKHGAGKWRTILKDPEFSGVLYLRSNVDLKDKWRNM 56
KQKWT EE +KAGV K+G G W I K+ F R+ V +KD+WR M
Sbjct: 447 KQKWTVEESEWVKAGVQKYGEGNWAAISKNYPFVN----RTAVMIKDRWRTM 494
>UNIPROTKB|F1PBX6 [details] [associations]
symbol:TERF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0042162 "telomeric DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0000781 "chromosome, telomeric region"
evidence=IEA] [GO:0000723 "telomere maintenance" evidence=IEA]
InterPro:IPR001005 InterPro:IPR009057 InterPro:IPR013867
InterPro:IPR017357 Pfam:PF00249 Pfam:PF08558 PIRSF:PIRSF038016
ProDom:PD014243 SMART:SM00717 GO:GO:0005634 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
PROSITE:PS51294 GO:GO:0000781 GO:GO:0000723 GO:GO:0042162
Gene3D:1.25.40.210 SUPFAM:SSF63600 GeneTree:ENSGT00530000063796
OMA:ITKKQKW EMBL:AAEX03004108 Ensembl:ENSCAFT00000032283
Uniprot:F1PBX6
Length = 504
Score = 114 (45.2 bits), Expect = 0.00066, P = 0.00066
Identities = 25/52 (48%), Positives = 31/52 (59%)
Query: 5 KQKWTQEEEAALKAGVIKHGAGKWRTILKDPEFSGVLYLRSNVDLKDKWRNM 56
KQKWT EE +KAGV K+G G W I K+ F R+ V +KD+WR M
Sbjct: 451 KQKWTVEESEWVKAGVQKYGEGNWAAISKNYPFVN----RTAVMIKDRWRTM 498
>UNIPROTKB|F1S2L2 [details] [associations]
symbol:TERF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070198 "protein localization to chromosome, telomeric
region" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0042162 "telomeric DNA binding"
evidence=IEA] [GO:0032206 "positive regulation of telomere
maintenance" evidence=IEA] [GO:0032205 "negative regulation of
telomere maintenance" evidence=IEA] [GO:0031848 "protection from
non-homologous end joining at telomere" evidence=IEA] [GO:0031627
"telomeric loop formation" evidence=IEA] [GO:0030870 "Mre11
complex" evidence=IEA] [GO:0010834 "telomere maintenance via
telomere shortening" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001673 "male germ cell nucleus" evidence=IEA] [GO:0000783
"nuclear telomere cap complex" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] InterPro:IPR001005 InterPro:IPR009057
InterPro:IPR013867 InterPro:IPR017357 Pfam:PF00249 Pfam:PF08558
PIRSF:PIRSF038016 ProDom:PD014243 SMART:SM00717 GO:GO:0005794
GO:GO:0001701 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000783 GO:GO:0031848 GO:GO:0070198 GO:GO:0001673
InterPro:IPR017930 PROSITE:PS51294 GO:GO:0042162 GO:GO:0032206
GO:GO:0031627 GO:GO:0032205 GO:GO:0030870 GO:GO:0010834
Gene3D:1.25.40.210 SUPFAM:SSF63600 GeneTree:ENSGT00530000063796
OMA:ITKKQKW EMBL:FP015939 Ensembl:ENSSSCT00000003059 Uniprot:F1S2L2
Length = 543
Score = 114 (45.2 bits), Expect = 0.00073, P = 0.00073
Identities = 25/52 (48%), Positives = 31/52 (59%)
Query: 5 KQKWTQEEEAALKAGVIKHGAGKWRTILKDPEFSGVLYLRSNVDLKDKWRNM 56
KQKWT EE +KAGV K+G G W I K+ F R+ V +KD+WR M
Sbjct: 490 KQKWTVEESEWVKAGVQKYGEGNWAAISKNYPFVN----RTAVMIKDRWRTM 537
>UNIPROTKB|F1MMS4 [details] [associations]
symbol:TERF2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070198 "protein localization to chromosome, telomeric
region" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0042162 "telomeric DNA binding"
evidence=IEA] [GO:0032206 "positive regulation of telomere
maintenance" evidence=IEA] [GO:0032205 "negative regulation of
telomere maintenance" evidence=IEA] [GO:0031848 "protection from
non-homologous end joining at telomere" evidence=IEA] [GO:0031627
"telomeric loop formation" evidence=IEA] [GO:0030870 "Mre11
complex" evidence=IEA] [GO:0010834 "telomere maintenance via
telomere shortening" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001673 "male germ cell nucleus" evidence=IEA] [GO:0000783
"nuclear telomere cap complex" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] InterPro:IPR001005 InterPro:IPR009057
InterPro:IPR013867 InterPro:IPR017357 Pfam:PF00249 Pfam:PF08558
PIRSF:PIRSF038016 ProDom:PD014243 SMART:SM00717 GO:GO:0005794
GO:GO:0001701 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000783 GO:GO:0031848 GO:GO:0070198 GO:GO:0001673
InterPro:IPR017930 PROSITE:PS51294 GO:GO:0042162 GO:GO:0032206
GO:GO:0031627 GO:GO:0032205 GO:GO:0030870 GO:GO:0010834
Gene3D:1.25.40.210 SUPFAM:SSF63600 GeneTree:ENSGT00530000063796
OMA:ITKKQKW EMBL:DAAA02046699 IPI:IPI00706872
Ensembl:ENSBTAT00000010016 Uniprot:F1MMS4
Length = 544
Score = 114 (45.2 bits), Expect = 0.00074, P = 0.00074
Identities = 25/52 (48%), Positives = 31/52 (59%)
Query: 5 KQKWTQEEEAALKAGVIKHGAGKWRTILKDPEFSGVLYLRSNVDLKDKWRNM 56
KQKWT EE +KAGV K+G G W I K+ F R+ V +KD+WR M
Sbjct: 491 KQKWTVEESEWVKAGVQKYGEGNWAAISKNYPFVN----RTAVMIKDRWRTM 538
>UNIPROTKB|F1NSI5 [details] [associations]
symbol:TERF2 "Telomeric repeat-binding factor 2"
species:9031 "Gallus gallus" [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0000783 "nuclear telomere cap complex"
evidence=IEA] [GO:0001673 "male germ cell nucleus" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0008022 "protein
C-terminus binding" evidence=IEA] [GO:0010834 "telomere maintenance
via telomere shortening" evidence=IEA] [GO:0030870 "Mre11 complex"
evidence=IEA] [GO:0031627 "telomeric loop formation" evidence=IEA]
[GO:0031848 "protection from non-homologous end joining at
telomere" evidence=IEA] [GO:0032205 "negative regulation of
telomere maintenance" evidence=IEA] [GO:0032206 "positive
regulation of telomere maintenance" evidence=IEA] [GO:0042162
"telomeric DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0070198 "protein
localization to chromosome, telomeric region" evidence=IEA]
InterPro:IPR001005 InterPro:IPR009057 InterPro:IPR013867
Pfam:PF00249 Pfam:PF08558 ProDom:PD014243 SMART:SM00717
GO:GO:0005794 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000783 GO:GO:0031848 GO:GO:0070198 GO:GO:0001673
InterPro:IPR017930 PROSITE:PS51294 GO:GO:0042162 GO:GO:0032206
GO:GO:0031627 GO:GO:0032205 GO:GO:0030870 GO:GO:0010834
Gene3D:1.25.40.210 SUPFAM:SSF63600 GeneTree:ENSGT00530000063796
EMBL:AADN02054167 IPI:IPI01017077 RefSeq:NP_001258821.1
Ensembl:ENSGALT00000000932 GeneID:395598 OMA:GENLDCT
NextBio:20815671 Uniprot:F1NSI5
Length = 718
Score = 115 (45.5 bits), Expect = 0.00083, P = 0.00083
Identities = 23/55 (41%), Positives = 35/55 (63%)
Query: 2 GAPKQKWTQEEEAALKAGVIKHGAGKWRTILKDPEFSGVLYLRSNVDLKDKWRNM 56
G+ KQKWT +E +K GV K+G G+W+TI + F R++V +KD++R M
Sbjct: 662 GSKKQKWTVQESEWIKDGVRKYGEGRWKTISEKYPFQN----RTSVQIKDRYRTM 712
>UNIPROTKB|Q9PU53 [details] [associations]
symbol:TERF2 "Telomeric repeat-binding factor 2"
species:9031 "Gallus gallus" [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=ISS;TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0042162 "telomeric DNA binding" evidence=ISS]
[GO:0000781 "chromosome, telomeric region" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 InterPro:IPR013867
Pfam:PF00249 Pfam:PF08558 ProDom:PD014243 SMART:SM00717
GO:GO:0005654 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0007049 InterPro:IPR017930 PROSITE:PS51294 GO:GO:0000781
GO:GO:0000723 GO:GO:0042162 Reactome:REACT_115612
Gene3D:1.25.40.210 SUPFAM:SSF63600 EMBL:AJ133783 EMBL:CR406218
IPI:IPI00602730 UniGene:Gga.2569 ProteinModelPortal:Q9PU53
SMR:Q9PU53 STRING:Q9PU53 PRIDE:Q9PU53 eggNOG:NOG44337
HOGENOM:HOG000202714 InParanoid:Q9PU53 OrthoDB:EOG4TB4CV
Uniprot:Q9PU53
Length = 718
Score = 115 (45.5 bits), Expect = 0.00083, P = 0.00083
Identities = 23/55 (41%), Positives = 35/55 (63%)
Query: 2 GAPKQKWTQEEEAALKAGVIKHGAGKWRTILKDPEFSGVLYLRSNVDLKDKWRNM 56
G+ KQKWT +E +K GV K+G G+W+TI + F R++V +KD++R M
Sbjct: 662 GSKKQKWTVQESEWIKDGVRKYGEGRWKTISEKYPFQN----RTSVQIKDRYRTM 712
>TAIR|locus:2036174 [details] [associations]
symbol:TRFL5 "TRF-like 5" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0003677 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
PROSITE:PS51294 EMBL:AC034256 HSSP:P54274 eggNOG:NOG323962
UniGene:At.16909 UniGene:At.48193 EMBL:BT003085 EMBL:AY519536
EMBL:AK227390 IPI:IPI00520047 PIR:D86291 RefSeq:NP_173024.1
ProteinModelPortal:Q9LMR2 SMR:Q9LMR2 IntAct:Q9LMR2
EnsemblPlants:AT1G15720.1 GeneID:838141 KEGG:ath:AT1G15720
TAIR:At1g15720 HOGENOM:HOG000140269 InParanoid:Q9LMR2 OMA:IRYNAIS
PhylomeDB:Q9LMR2 ProtClustDB:CLSN2679506 ArrayExpress:Q9LMR2
Genevestigator:Q9LMR2 Uniprot:Q9LMR2
Length = 390
Score = 111 (44.1 bits), Expect = 0.00098, P = 0.00098
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 4 PKQKWTQEEEAALKAGVIKHGAGKWRTILKDPEFSGVLYLRSNVDLKDKWRNM 56
P + WT EE AAL+ GV ++G W+ I K+ + V RS VDLKDKWRN+
Sbjct: 337 PMKFWTSEEVAALREGVKEYGKS-WKDI-KN-SYPVVFADRSEVDLKDKWRNL 386
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.130 0.366 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 303 258 0.00087 114 3 11 23 0.37 34
32 0.48 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 22
No. of states in DFA: 581 (62 KB)
Total size of DFA: 173 KB (2101 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.20u 0.16s 21.36t Elapsed: 00:00:01
Total cpu time: 21.20u 0.16s 21.36t Elapsed: 00:00:01
Start: Sat May 11 03:00:28 2013 End: Sat May 11 03:00:29 2013