Query 022050
Match_columns 303
No_of_seqs 229 out of 1692
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 13:13:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022050.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022050hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fgw_A Glycerol-3-phosphate de 100.0 2.7E-40 9.3E-45 317.7 21.2 216 42-303 33-261 (391)
2 3k96_A Glycerol-3-phosphate de 100.0 4.3E-36 1.5E-40 286.1 24.4 204 42-303 28-232 (356)
3 1yj8_A Glycerol-3-phosphate de 100.0 3.6E-28 1.2E-32 231.9 19.1 209 43-302 21-241 (375)
4 1x0v_A GPD-C, GPDH-C, glycerol 99.9 5.9E-26 2E-30 214.0 24.2 209 43-302 8-224 (354)
5 1z82_A Glycerol-3-phosphate de 99.9 3.1E-26 1.1E-30 215.2 20.8 194 42-302 13-206 (335)
6 1evy_A Glycerol-3-phosphate de 99.9 2.6E-25 8.9E-30 211.0 22.5 202 45-302 17-225 (366)
7 3hwr_A 2-dehydropantoate 2-red 99.9 1.3E-25 4.5E-30 210.0 7.3 192 42-301 18-214 (318)
8 1txg_A Glycerol-3-phosphate de 99.9 4.1E-23 1.4E-27 192.5 19.5 198 44-301 1-206 (335)
9 3hn2_A 2-dehydropantoate 2-red 99.9 1.1E-23 3.8E-28 196.2 10.5 194 44-301 3-203 (312)
10 3i83_A 2-dehydropantoate 2-red 99.9 6.7E-23 2.3E-27 191.6 10.4 191 44-300 3-208 (320)
11 3ghy_A Ketopantoate reductase 99.9 8.5E-22 2.9E-26 185.2 10.0 206 43-301 3-227 (335)
12 3g17_A Similar to 2-dehydropan 99.8 7.2E-21 2.5E-25 175.8 12.4 178 43-296 2-181 (294)
13 2ew2_A 2-dehydropantoate 2-red 99.8 1.5E-20 5E-25 173.0 13.9 195 43-300 3-207 (316)
14 3ego_A Probable 2-dehydropanto 99.8 1.2E-19 4E-24 168.9 10.9 190 43-300 2-197 (307)
15 2raf_A Putative dinucleotide-b 99.8 2.4E-18 8.1E-23 151.6 16.7 173 42-302 18-199 (209)
16 4a7p_A UDP-glucose dehydrogena 99.8 2.5E-18 8.5E-23 168.0 16.1 196 43-291 8-223 (446)
17 2f1k_A Prephenate dehydrogenas 99.8 6.2E-19 2.1E-23 160.6 10.7 185 44-301 1-193 (279)
18 2qyt_A 2-dehydropantoate 2-red 99.8 1.3E-18 4.6E-23 160.5 12.0 199 42-301 7-218 (317)
19 2y0c_A BCEC, UDP-glucose dehyd 99.8 2.7E-18 9.1E-23 169.2 14.1 199 42-291 7-229 (478)
20 3tri_A Pyrroline-5-carboxylate 99.8 1.3E-17 4.6E-22 153.2 16.8 157 43-274 3-162 (280)
21 3gg2_A Sugar dehydrogenase, UD 99.8 8.5E-18 2.9E-22 164.5 16.0 198 44-291 3-219 (450)
22 1ks9_A KPA reductase;, 2-dehyd 99.8 2.6E-18 9E-23 156.3 10.9 179 44-291 1-183 (291)
23 3gt0_A Pyrroline-5-carboxylate 99.7 5.2E-17 1.8E-21 146.0 15.1 162 43-278 2-165 (247)
24 2izz_A Pyrroline-5-carboxylate 99.7 9.3E-17 3.2E-21 150.2 16.0 166 43-280 22-191 (322)
25 4huj_A Uncharacterized protein 99.7 5.8E-16 2E-20 137.2 15.3 170 43-280 23-202 (220)
26 2g5c_A Prephenate dehydrogenas 99.7 4E-16 1.4E-20 142.2 13.5 181 43-295 1-195 (281)
27 3dtt_A NADP oxidoreductase; st 99.7 3.5E-15 1.2E-19 134.2 17.0 194 41-289 17-226 (245)
28 3g79_A NDP-N-acetyl-D-galactos 99.6 3.5E-15 1.2E-19 146.8 17.5 199 42-290 17-241 (478)
29 2rcy_A Pyrroline carboxylate r 99.6 3.5E-15 1.2E-19 134.4 15.5 154 43-278 4-159 (262)
30 3c7a_A Octopine dehydrogenase; 99.6 3.1E-16 1.1E-20 150.4 8.4 198 43-299 2-219 (404)
31 1mv8_A GMD, GDP-mannose 6-dehy 99.6 5.9E-15 2E-19 143.5 16.7 201 44-291 1-217 (436)
32 3ado_A Lambda-crystallin; L-gu 99.6 1.5E-15 5.1E-20 142.3 10.4 161 41-241 4-169 (319)
33 4dll_A 2-hydroxy-3-oxopropiona 99.6 6.8E-15 2.3E-19 137.3 14.5 184 39-300 27-217 (320)
34 1vpd_A Tartronate semialdehyde 99.6 9.6E-15 3.3E-19 133.9 14.9 172 44-291 6-182 (299)
35 2h78_A Hibadh, 3-hydroxyisobut 99.6 4.9E-15 1.7E-19 136.5 12.0 173 42-291 2-180 (302)
36 3pdu_A 3-hydroxyisobutyrate de 99.6 5.9E-15 2E-19 135.3 11.9 180 43-299 1-188 (287)
37 1dlj_A UDP-glucose dehydrogena 99.6 7.8E-15 2.7E-19 141.4 13.2 184 44-290 1-210 (402)
38 3d1l_A Putative NADP oxidoredu 99.6 1.3E-14 4.5E-19 131.1 13.9 178 43-298 10-193 (266)
39 3pef_A 6-phosphogluconate dehy 99.6 1.3E-14 4.6E-19 132.9 13.9 182 43-299 1-188 (287)
40 3doj_A AT3G25530, dehydrogenas 99.6 1.3E-14 4.4E-19 134.8 13.8 185 39-300 17-209 (310)
41 1yqg_A Pyrroline-5-carboxylate 99.6 8.9E-15 3E-19 131.8 12.3 152 44-276 1-155 (263)
42 2dpo_A L-gulonate 3-dehydrogen 99.6 5.6E-14 1.9E-18 131.6 17.4 184 42-280 5-193 (319)
43 3g0o_A 3-hydroxyisobutyrate de 99.6 1.1E-14 3.7E-19 134.7 12.2 182 42-299 6-196 (303)
44 2uyy_A N-PAC protein; long-cha 99.6 2.6E-14 8.9E-19 132.4 14.5 171 43-290 30-206 (316)
45 3qsg_A NAD-binding phosphogluc 99.6 1.1E-13 3.8E-18 128.8 17.6 180 42-299 23-210 (312)
46 1bg6_A N-(1-D-carboxylethyl)-L 99.6 2.8E-14 9.4E-19 133.7 13.6 185 43-292 4-200 (359)
47 3pid_A UDP-glucose 6-dehydroge 99.6 5.9E-14 2E-18 136.4 16.1 187 42-291 35-240 (432)
48 3qha_A Putative oxidoreductase 99.5 3.1E-14 1.1E-18 131.4 13.1 179 43-299 15-198 (296)
49 2o3j_A UDP-glucose 6-dehydroge 99.5 2.8E-14 9.6E-19 140.5 13.1 199 43-290 9-233 (481)
50 2zyd_A 6-phosphogluconate dehy 99.5 2.5E-14 8.4E-19 141.0 12.4 184 43-300 15-213 (480)
51 1jay_A Coenzyme F420H2:NADP+ o 99.5 1.5E-13 5.3E-18 119.7 16.1 186 44-290 1-195 (212)
52 3cky_A 2-hydroxymethyl glutara 99.5 5.5E-14 1.9E-18 129.0 13.5 172 43-291 4-181 (301)
53 2ahr_A Putative pyrroline carb 99.5 1.1E-13 3.8E-18 124.6 15.0 152 42-275 2-155 (259)
54 1f0y_A HCDH, L-3-hydroxyacyl-C 99.5 1.1E-13 3.7E-18 127.8 15.0 185 42-277 14-202 (302)
55 3ojo_A CAP5O; rossmann fold, c 99.5 6.1E-14 2.1E-18 136.3 13.7 193 44-290 12-221 (431)
56 2pgd_A 6-phosphogluconate dehy 99.5 3.7E-14 1.3E-18 139.7 12.0 183 44-299 3-200 (482)
57 3ggo_A Prephenate dehydrogenas 99.5 1.2E-13 4.2E-18 128.8 14.9 185 19-276 9-205 (314)
58 4e12_A Diketoreductase; oxidor 99.5 1.6E-13 5.4E-18 125.9 15.3 183 43-280 4-191 (283)
59 3vtf_A UDP-glucose 6-dehydroge 99.5 2.6E-13 8.9E-18 132.2 17.7 216 13-290 3-234 (444)
60 2cvz_A Dehydrogenase, 3-hydrox 99.5 1.9E-13 6.4E-18 124.4 15.4 177 43-299 1-182 (289)
61 2gf2_A Hibadh, 3-hydroxyisobut 99.5 2.2E-13 7.7E-18 124.6 15.3 170 44-290 1-176 (296)
62 3c24_A Putative oxidoreductase 99.5 6.3E-14 2.1E-18 128.3 10.4 153 43-275 11-183 (286)
63 1yb4_A Tartronic semialdehyde 99.5 9.7E-14 3.3E-18 126.8 11.5 171 42-290 2-178 (295)
64 3b1f_A Putative prephenate deh 99.5 2.9E-13 1E-17 123.7 13.9 164 43-276 6-181 (290)
65 1pgj_A 6PGDH, 6-PGDH, 6-phosph 99.5 1.9E-13 6.5E-18 134.5 13.4 186 44-299 2-202 (478)
66 2q3e_A UDP-glucose 6-dehydroge 99.5 2E-13 6.7E-18 133.9 12.9 198 43-290 5-227 (467)
67 2p4q_A 6-phosphogluconate dehy 99.5 1.7E-13 5.7E-18 135.6 11.9 184 43-299 10-207 (497)
68 2iz1_A 6-phosphogluconate dehy 99.5 2.9E-13 1E-17 133.0 13.3 182 44-299 6-203 (474)
69 4e21_A 6-phosphogluconate dehy 99.5 4.8E-13 1.6E-17 127.2 14.4 179 43-300 22-228 (358)
70 2vns_A Metalloreductase steap3 99.5 7.3E-13 2.5E-17 116.8 14.5 164 42-278 27-196 (215)
71 3k6j_A Protein F01G10.3, confi 99.5 2.4E-12 8.2E-17 126.0 19.1 178 43-280 54-235 (460)
72 4ezb_A Uncharacterized conserv 99.4 2.2E-12 7.5E-17 120.4 17.1 185 43-299 24-212 (317)
73 2pv7_A T-protein [includes: ch 99.4 1.5E-12 5.2E-17 120.2 15.3 161 43-292 21-185 (298)
74 2yjz_A Metalloreductase steap4 99.1 1.6E-14 5.5E-19 126.6 0.0 165 43-282 19-188 (201)
75 1i36_A Conserved hypothetical 99.4 1E-11 3.5E-16 111.8 18.0 170 44-299 1-176 (264)
76 4gwg_A 6-phosphogluconate dehy 99.4 2E-12 7E-17 127.3 14.4 188 42-300 3-203 (484)
77 1np3_A Ketol-acid reductoisome 99.4 2.1E-12 7.1E-17 121.6 13.5 174 43-295 16-211 (338)
78 3mog_A Probable 3-hydroxybutyr 99.4 4.1E-12 1.4E-16 125.2 15.8 180 43-279 5-188 (483)
79 3zwc_A Peroxisomal bifunctiona 99.4 5.6E-12 1.9E-16 129.9 16.4 155 43-241 316-475 (742)
80 1zej_A HBD-9, 3-hydroxyacyl-CO 99.4 7E-12 2.4E-16 116.1 14.0 156 43-277 12-173 (293)
81 3l6d_A Putative oxidoreductase 99.3 1.5E-11 5.2E-16 113.9 14.4 155 42-274 8-167 (306)
82 1zcj_A Peroxisomal bifunctiona 99.3 4.8E-11 1.6E-15 116.9 18.6 155 42-240 36-195 (463)
83 2wtb_A MFP2, fatty acid multif 99.3 1.9E-11 6.5E-16 125.9 16.0 178 43-280 312-496 (725)
84 2i76_A Hypothetical protein; N 99.3 4.4E-13 1.5E-17 122.4 2.6 177 43-301 2-186 (276)
85 1wdk_A Fatty oxidation complex 99.3 3.6E-11 1.2E-15 123.6 16.9 182 42-280 313-498 (715)
86 3obb_A Probable 3-hydroxyisobu 99.3 3.2E-11 1.1E-15 111.9 12.7 182 42-300 2-191 (300)
87 4gbj_A 6-phosphogluconate dehy 99.3 8.8E-11 3E-15 108.6 15.3 180 44-300 6-192 (297)
88 3ktd_A Prephenate dehydrogenas 99.2 3.5E-11 1.2E-15 113.6 11.0 159 42-275 7-186 (341)
89 3fr7_A Putative ketol-acid red 99.2 1.4E-10 4.9E-15 113.5 13.4 153 44-270 55-230 (525)
90 1lld_A L-lactate dehydrogenase 99.1 2.6E-10 9E-15 105.5 9.1 107 42-203 6-130 (319)
91 1pzg_A LDH, lactate dehydrogen 99.1 1.2E-09 4.1E-14 102.6 13.6 106 43-201 9-136 (331)
92 2ewd_A Lactate dehydrogenase,; 99.0 1.7E-09 5.8E-14 100.6 12.1 106 43-202 4-126 (317)
93 1hyh_A L-hicdh, L-2-hydroxyiso 99.0 2E-09 6.7E-14 99.7 11.5 106 43-202 1-127 (309)
94 2hjr_A Malate dehydrogenase; m 99.0 4.7E-09 1.6E-13 98.4 12.6 105 43-201 14-135 (328)
95 1a5z_A L-lactate dehydrogenase 98.9 7.9E-09 2.7E-13 96.3 12.0 103 44-202 1-121 (319)
96 1t2d_A LDH-P, L-lactate dehydr 98.8 3E-08 1E-12 92.6 12.7 105 43-201 4-130 (322)
97 1guz_A Malate dehydrogenase; o 98.8 3.1E-08 1.1E-12 91.9 12.6 107 44-202 1-123 (310)
98 2v6b_A L-LDH, L-lactate dehydr 98.8 1.9E-08 6.4E-13 93.2 9.7 103 44-202 1-121 (304)
99 3dfu_A Uncharacterized protein 98.8 2.4E-08 8.4E-13 89.3 9.9 129 42-276 5-133 (232)
100 1oju_A MDH, malate dehydrogena 98.7 4.2E-08 1.4E-12 90.7 11.0 104 44-201 1-122 (294)
101 2i6t_A Ubiquitin-conjugating e 98.7 8.5E-08 2.9E-12 88.9 12.6 109 35-201 6-129 (303)
102 3ba1_A HPPR, hydroxyphenylpyru 98.7 2.5E-08 8.4E-13 93.8 7.5 93 42-203 163-257 (333)
103 1u8x_X Maltose-6'-phosphate gl 98.7 6.2E-08 2.1E-12 95.1 10.2 111 43-202 28-176 (472)
104 1ur5_A Malate dehydrogenase; o 98.6 3E-07 1E-11 85.3 12.7 104 44-201 3-123 (309)
105 3gvi_A Malate dehydrogenase; N 98.6 3.8E-07 1.3E-11 85.4 13.4 106 43-202 7-129 (324)
106 2gcg_A Glyoxylate reductase/hy 98.6 4.8E-08 1.6E-12 91.5 7.0 94 43-201 155-250 (330)
107 2dbq_A Glyoxylate reductase; D 98.6 5.8E-08 2E-12 91.1 7.6 96 42-203 149-246 (334)
108 1obb_A Maltase, alpha-glucosid 98.6 1.3E-07 4.4E-12 92.9 10.2 111 43-202 3-157 (480)
109 4dgs_A Dehydrogenase; structur 98.6 1.6E-07 5.4E-12 88.6 9.7 92 43-203 171-264 (340)
110 2g1u_A Hypothetical protein TM 98.6 6E-07 2E-11 74.3 12.1 39 43-87 19-57 (155)
111 3fef_A Putative glucosidase LP 98.6 1.8E-07 6.2E-12 91.2 9.9 107 43-202 5-151 (450)
112 1ldn_A L-lactate dehydrogenase 98.5 5.8E-07 2E-11 83.6 12.5 108 41-201 4-127 (316)
113 2w2k_A D-mandelate dehydrogena 98.5 1.3E-07 4.6E-12 89.2 7.4 94 42-199 162-258 (348)
114 3gvx_A Glycerate dehydrogenase 98.5 1.2E-07 4.1E-12 87.5 6.7 92 43-203 122-215 (290)
115 1s6y_A 6-phospho-beta-glucosid 98.5 3.1E-07 1.1E-11 89.6 9.9 111 43-202 7-157 (450)
116 1y6j_A L-lactate dehydrogenase 98.5 6.5E-07 2.2E-11 83.4 11.7 106 42-201 6-127 (318)
117 1lss_A TRK system potassium up 98.5 8.4E-07 2.9E-11 70.9 10.8 39 43-87 4-42 (140)
118 2d0i_A Dehydrogenase; structur 98.5 1.5E-07 5E-12 88.4 6.7 96 41-203 144-241 (333)
119 3pqe_A L-LDH, L-lactate dehydr 98.4 1.2E-06 4.2E-11 82.0 11.8 41 42-86 4-44 (326)
120 2d4a_B Malate dehydrogenase; a 98.4 1.5E-06 5.1E-11 80.6 12.3 103 45-201 1-120 (308)
121 3p7m_A Malate dehydrogenase; p 98.4 1.7E-06 6E-11 80.7 12.7 106 43-202 5-127 (321)
122 3nep_X Malate dehydrogenase; h 98.4 1.5E-06 5E-11 81.0 11.7 39 44-86 1-39 (314)
123 3ldh_A Lactate dehydrogenase; 98.4 1.2E-06 4E-11 82.2 10.8 107 42-201 20-142 (330)
124 2zqz_A L-LDH, L-lactate dehydr 98.4 2.2E-06 7.6E-11 80.1 12.4 110 39-202 5-130 (326)
125 2hk9_A Shikimate dehydrogenase 98.4 2.8E-07 9.5E-12 83.9 5.5 120 14-198 102-222 (275)
126 3vku_A L-LDH, L-lactate dehydr 98.4 2.3E-06 7.9E-11 80.1 11.6 108 40-201 6-129 (326)
127 1ez4_A Lactate dehydrogenase; 98.4 3.6E-06 1.2E-10 78.4 12.8 105 44-202 6-126 (318)
128 3pp8_A Glyoxylate/hydroxypyruv 98.4 3.8E-07 1.3E-11 85.1 5.9 95 43-203 139-235 (315)
129 3jtm_A Formate dehydrogenase, 98.3 7.8E-07 2.7E-11 84.1 7.8 98 42-203 163-262 (351)
130 3d0o_A L-LDH 1, L-lactate dehy 98.3 3.4E-06 1.2E-10 78.5 11.4 40 43-86 6-45 (317)
131 2i99_A MU-crystallin homolog; 98.3 7.7E-07 2.6E-11 82.5 6.7 94 40-196 132-225 (312)
132 3fwz_A Inner membrane protein 98.3 6.9E-06 2.4E-10 66.8 11.6 40 42-87 6-45 (140)
133 3tl2_A Malate dehydrogenase; c 98.3 5.6E-06 1.9E-10 77.1 12.4 104 43-200 8-130 (315)
134 3evt_A Phosphoglycerate dehydr 98.3 7.6E-07 2.6E-11 83.3 5.8 95 43-203 137-233 (324)
135 1ygy_A PGDH, D-3-phosphoglycer 98.3 7.2E-07 2.5E-11 88.7 5.8 96 42-203 141-238 (529)
136 3oj0_A Glutr, glutamyl-tRNA re 98.3 6.6E-07 2.2E-11 73.1 4.6 91 43-198 21-111 (144)
137 1gdh_A D-glycerate dehydrogena 98.3 9E-07 3.1E-11 82.6 6.1 93 42-199 145-240 (320)
138 4g2n_A D-isomer specific 2-hyd 98.3 1.5E-06 5.3E-11 81.9 7.7 95 43-203 173-269 (345)
139 3llv_A Exopolyphosphatase-rela 98.2 6.3E-06 2.2E-10 66.6 10.3 39 43-87 6-44 (141)
140 4aj2_A L-lactate dehydrogenase 98.2 3.4E-06 1.2E-10 79.1 9.7 108 41-201 17-140 (331)
141 2ekl_A D-3-phosphoglycerate de 98.2 1E-06 3.6E-11 81.9 6.2 93 42-200 141-235 (313)
142 2nac_A NAD-dependent formate d 98.2 1.4E-06 4.8E-11 83.6 7.1 97 42-202 190-288 (393)
143 3l4b_C TRKA K+ channel protien 98.2 1.8E-06 6.1E-11 75.3 7.1 103 44-202 1-104 (218)
144 2j6i_A Formate dehydrogenase; 98.2 1.4E-06 4.6E-11 82.8 6.6 97 42-202 163-262 (364)
145 1mx3_A CTBP1, C-terminal bindi 98.2 1.2E-06 4.2E-11 82.7 6.2 98 40-202 165-264 (347)
146 1wwk_A Phosphoglycerate dehydr 98.2 1.9E-06 6.6E-11 79.8 7.5 93 42-200 141-235 (307)
147 1y81_A Conserved hypothetical 98.2 4.4E-06 1.5E-10 68.5 8.7 75 42-182 13-91 (138)
148 3q2i_A Dehydrogenase; rossmann 98.2 7.7E-06 2.6E-10 76.5 11.3 83 39-180 9-95 (354)
149 3ic5_A Putative saccharopine d 98.2 3.2E-06 1.1E-10 65.4 7.4 39 43-86 5-43 (118)
150 1qp8_A Formate dehydrogenase; 98.2 1.1E-06 3.8E-11 81.4 4.7 89 42-200 123-213 (303)
151 3abi_A Putative uncharacterize 98.2 2.9E-06 1E-10 80.0 7.7 44 37-87 10-53 (365)
152 2xxj_A L-LDH, L-lactate dehydr 98.2 8.8E-06 3E-10 75.5 10.5 39 44-86 1-39 (310)
153 3gg9_A D-3-phosphoglycerate de 98.1 2.1E-06 7.2E-11 81.2 5.9 96 43-203 160-257 (352)
154 3fi9_A Malate dehydrogenase; s 98.1 2.4E-05 8.3E-10 73.7 12.9 106 42-201 7-130 (343)
155 2x0j_A Malate dehydrogenase; o 98.1 1.8E-05 6.2E-10 73.0 11.7 107 44-202 1-123 (294)
156 2dc1_A L-aspartate dehydrogena 98.1 1.5E-05 5.1E-10 70.5 10.8 81 44-199 1-83 (236)
157 1sc6_A PGDH, D-3-phosphoglycer 98.1 3.1E-06 1.1E-10 81.5 6.7 93 42-202 144-238 (404)
158 2cuk_A Glycerate dehydrogenase 98.1 1.7E-06 5.9E-11 80.3 4.6 89 42-201 143-233 (311)
159 4e5n_A Thermostable phosphite 98.1 2.3E-06 7.8E-11 80.2 5.4 96 43-203 145-242 (330)
160 2hmt_A YUAA protein; RCK, KTN, 98.1 1.4E-05 4.9E-10 63.8 9.4 38 43-86 6-43 (144)
161 3k5p_A D-3-phosphoglycerate de 98.1 4.5E-06 1.5E-10 80.6 7.2 92 43-202 156-249 (416)
162 2duw_A Putative COA-binding pr 98.1 6.3E-06 2.2E-10 68.1 6.9 76 43-182 13-92 (145)
163 2g76_A 3-PGDH, D-3-phosphoglyc 98.1 5.3E-06 1.8E-10 77.9 7.2 94 42-201 164-259 (335)
164 3euw_A MYO-inositol dehydrogen 98.1 2E-05 6.9E-10 73.3 11.1 80 43-181 4-86 (344)
165 3hg7_A D-isomer specific 2-hyd 98.1 1.3E-06 4.4E-11 81.8 2.9 95 43-203 140-236 (324)
166 1j4a_A D-LDH, D-lactate dehydr 98.1 3.7E-06 1.3E-10 78.8 5.8 93 43-202 146-240 (333)
167 3qy9_A DHPR, dihydrodipicolina 98.0 9.3E-06 3.2E-10 72.9 8.0 109 43-239 3-112 (243)
168 3ec7_A Putative dehydrogenase; 98.0 2.5E-05 8.7E-10 73.3 11.3 82 43-181 23-108 (357)
169 2ho3_A Oxidoreductase, GFO/IDH 98.0 3E-05 1E-09 71.5 11.6 80 43-180 1-82 (325)
170 2pi1_A D-lactate dehydrogenase 98.0 6.1E-06 2.1E-10 77.4 6.8 94 43-203 141-236 (334)
171 2yq5_A D-isomer specific 2-hyd 98.0 7.5E-06 2.6E-10 77.1 7.4 93 43-203 148-242 (343)
172 3d4o_A Dipicolinate synthase s 98.0 1.4E-05 4.7E-10 73.3 8.8 91 42-199 154-246 (293)
173 4hkt_A Inositol 2-dehydrogenas 98.0 2.8E-05 9.6E-10 71.9 11.1 79 43-181 3-84 (331)
174 3uuw_A Putative oxidoreductase 98.0 1.6E-05 5.4E-10 72.9 9.1 94 43-202 6-101 (308)
175 3c85_A Putative glutathione-re 98.0 4.7E-05 1.6E-09 64.2 11.0 40 43-87 39-78 (183)
176 2vt3_A REX, redox-sensing tran 98.0 1.9E-05 6.3E-10 69.7 8.6 95 26-182 70-167 (215)
177 2d5c_A AROE, shikimate 5-dehyd 98.0 8E-06 2.8E-10 73.4 6.3 36 45-86 118-153 (263)
178 2rir_A Dipicolinate synthase, 98.0 1.6E-05 5.5E-10 73.0 8.2 93 42-199 156-248 (300)
179 3ezy_A Dehydrogenase; structur 98.0 3.2E-05 1.1E-09 72.0 10.4 80 43-180 2-84 (344)
180 1dxy_A D-2-hydroxyisocaproate 98.0 9.1E-06 3.1E-10 76.1 6.5 90 43-200 145-236 (333)
181 3mz0_A Inositol 2-dehydrogenas 97.9 4.5E-05 1.6E-09 70.9 11.0 81 43-180 2-86 (344)
182 1xdw_A NAD+-dependent (R)-2-hy 97.9 8.1E-06 2.8E-10 76.4 5.7 92 43-202 146-239 (331)
183 1mld_A Malate dehydrogenase; o 97.9 4E-05 1.4E-09 71.1 10.3 102 44-202 1-122 (314)
184 4hy3_A Phosphoglycerate oxidor 97.9 1.8E-05 6E-10 75.2 7.9 95 43-203 176-272 (365)
185 3cea_A MYO-inositol 2-dehydrog 97.9 5.4E-05 1.9E-09 70.2 11.2 80 42-180 7-91 (346)
186 3e9m_A Oxidoreductase, GFO/IDH 97.9 2.6E-05 9E-10 72.3 8.7 80 42-180 4-87 (330)
187 1x7d_A Ornithine cyclodeaminas 97.9 8.7E-06 3E-10 76.8 5.2 100 40-196 126-225 (350)
188 3evn_A Oxidoreductase, GFO/IDH 97.9 5.6E-05 1.9E-09 70.0 10.4 94 43-202 5-102 (329)
189 3oet_A Erythronate-4-phosphate 97.9 1.4E-05 4.7E-10 76.3 6.3 92 43-203 119-216 (381)
190 3db2_A Putative NADPH-dependen 97.9 4.1E-05 1.4E-09 71.5 9.4 79 43-180 5-86 (354)
191 2o4c_A Erythronate-4-phosphate 97.9 6.4E-06 2.2E-10 78.7 3.8 92 42-202 115-212 (380)
192 3u95_A Glycoside hydrolase, fa 97.9 5.1E-05 1.7E-09 74.5 10.3 111 44-202 1-164 (477)
193 1tlt_A Putative oxidoreductase 97.9 6.3E-05 2.1E-09 69.2 10.4 39 43-86 5-45 (319)
194 4h7p_A Malate dehydrogenase; s 97.9 0.00011 3.8E-09 69.2 12.0 131 18-201 5-154 (345)
195 1iuk_A Hypothetical protein TT 97.9 2.6E-05 9E-10 64.0 6.7 86 30-183 4-93 (140)
196 1id1_A Putative potassium chan 97.8 4.4E-05 1.5E-09 62.7 7.8 33 44-82 4-36 (153)
197 2glx_A 1,5-anhydro-D-fructose 97.8 6.7E-05 2.3E-09 69.2 9.7 77 44-180 1-82 (332)
198 4f3y_A DHPR, dihydrodipicolina 97.8 0.00012 4.1E-09 66.7 11.0 125 43-239 7-133 (272)
199 3rc1_A Sugar 3-ketoreductase; 97.8 0.00013 4.5E-09 68.2 11.5 94 43-202 27-124 (350)
200 3c1a_A Putative oxidoreductase 97.8 5.8E-05 2E-09 69.3 8.8 78 42-180 9-89 (315)
201 2z2v_A Hypothetical protein PH 97.8 2.3E-05 7.9E-10 74.3 6.0 43 38-87 11-53 (365)
202 1xea_A Oxidoreductase, GFO/IDH 97.8 4.9E-05 1.7E-09 70.1 7.9 39 43-86 2-41 (323)
203 2d59_A Hypothetical protein PH 97.8 0.00011 3.7E-09 60.5 9.1 83 31-183 14-100 (144)
204 3ijp_A DHPR, dihydrodipicolina 97.8 0.00014 4.8E-09 66.8 10.6 141 19-239 6-148 (288)
205 1b8p_A Protein (malate dehydro 97.7 0.00014 4.7E-09 67.8 10.5 110 42-200 4-136 (329)
206 3u62_A Shikimate dehydrogenase 97.7 6.1E-05 2.1E-09 67.9 7.5 118 45-244 110-230 (253)
207 3ulk_A Ketol-acid reductoisome 97.7 0.00014 4.9E-09 70.3 10.4 120 23-202 8-136 (491)
208 4gqa_A NAD binding oxidoreduct 97.7 0.00012 4.2E-09 69.7 9.8 118 19-202 6-131 (412)
209 1smk_A Malate dehydrogenase, g 97.7 0.00012 4E-09 68.3 9.2 38 42-83 7-45 (326)
210 3ohs_X Trans-1,2-dihydrobenzen 97.7 0.00012 4.2E-09 67.7 9.4 96 43-202 2-101 (334)
211 4had_A Probable oxidoreductase 97.7 0.00029 9.8E-09 65.4 11.9 97 42-203 22-122 (350)
212 1ydw_A AX110P-like protein; st 97.7 0.00019 6.4E-09 67.2 10.5 99 42-202 5-106 (362)
213 3m2t_A Probable dehydrogenase; 97.6 0.00019 6.4E-09 67.4 9.9 95 43-202 5-103 (359)
214 3hdj_A Probable ornithine cycl 97.6 6.1E-05 2.1E-09 70.0 6.4 95 40-196 118-212 (313)
215 1o6z_A MDH, malate dehydrogena 97.6 0.00026 8.9E-09 65.2 10.3 38 44-85 1-41 (303)
216 3e18_A Oxidoreductase; dehydro 97.6 0.00023 8E-09 66.7 9.8 93 43-202 5-100 (359)
217 2egg_A AROE, shikimate 5-dehyd 97.6 0.00017 5.7E-09 66.3 8.5 67 14-87 113-180 (297)
218 3hhp_A Malate dehydrogenase; M 97.6 0.00056 1.9E-08 63.5 11.8 36 44-82 1-37 (312)
219 3e82_A Putative oxidoreductase 97.6 0.00038 1.3E-08 65.4 10.8 93 42-202 6-102 (364)
220 1omo_A Alanine dehydrogenase; 97.5 0.00021 7.2E-09 66.4 8.6 43 41-87 123-165 (322)
221 3moi_A Probable dehydrogenase; 97.5 0.00027 9.4E-09 66.9 9.5 79 43-180 2-84 (387)
222 3keo_A Redox-sensing transcrip 97.5 0.00021 7.1E-09 62.8 7.6 101 22-183 65-171 (212)
223 2dt5_A AT-rich DNA-binding pro 97.5 0.00022 7.5E-09 62.6 7.8 97 25-182 64-162 (211)
224 1up7_A 6-phospho-beta-glucosid 97.5 0.00033 1.1E-08 67.5 9.5 106 43-202 2-146 (417)
225 3h9u_A Adenosylhomocysteinase; 97.5 0.00017 5.7E-09 69.9 7.3 52 26-84 195-246 (436)
226 3l9w_A Glutathione-regulated p 97.5 0.00024 8.1E-09 68.4 8.4 39 43-87 4-42 (413)
227 3f4l_A Putative oxidoreductase 97.5 0.00035 1.2E-08 65.0 9.3 94 43-202 2-100 (345)
228 2p2s_A Putative oxidoreductase 97.5 0.00048 1.6E-08 63.6 10.2 79 43-180 4-86 (336)
229 1jw9_B Molybdopterin biosynthe 97.5 0.00097 3.3E-08 59.6 11.8 34 44-82 32-65 (249)
230 3bio_A Oxidoreductase, GFO/IDH 97.5 0.00037 1.3E-08 64.1 9.2 38 43-85 9-47 (304)
231 3u3x_A Oxidoreductase; structu 97.5 0.00041 1.4E-08 65.1 9.7 94 43-202 26-123 (361)
232 1h6d_A Precursor form of gluco 97.5 0.00029 9.9E-09 67.9 8.6 85 42-180 82-170 (433)
233 4g65_A TRK system potassium up 97.5 0.00018 6.1E-09 70.2 7.1 40 42-87 2-41 (461)
234 2nu8_A Succinyl-COA ligase [AD 97.4 0.00089 3E-08 61.3 11.3 94 42-203 6-102 (288)
235 1dih_A Dihydrodipicolinate red 97.4 0.0005 1.7E-08 62.5 9.3 127 43-240 5-133 (273)
236 3ce6_A Adenosylhomocysteinase; 97.4 0.00056 1.9E-08 67.3 10.0 37 43-85 274-310 (494)
237 3p2y_A Alanine dehydrogenase/p 97.4 0.00018 6.2E-09 68.6 6.2 39 43-87 184-222 (381)
238 1f06_A MESO-diaminopimelate D- 97.4 0.00045 1.5E-08 64.0 8.7 36 43-83 3-39 (320)
239 1zh8_A Oxidoreductase; TM0312, 97.4 0.0011 3.6E-08 61.7 11.1 97 42-202 17-117 (340)
240 7mdh_A Protein (malate dehydro 97.4 0.0025 8.6E-08 60.5 13.6 115 42-201 31-162 (375)
241 3fhl_A Putative oxidoreductase 97.3 0.00094 3.2E-08 62.5 10.5 93 42-202 4-100 (362)
242 3d64_A Adenosylhomocysteinase; 97.3 0.00036 1.2E-08 68.7 7.4 91 42-199 276-366 (494)
243 3kux_A Putative oxidoreductase 97.3 0.0011 3.6E-08 61.8 10.4 77 43-180 7-87 (352)
244 1v8b_A Adenosylhomocysteinase; 97.3 0.00042 1.4E-08 68.0 7.5 92 41-199 255-346 (479)
245 2aef_A Calcium-gated potassium 97.3 0.00033 1.1E-08 61.3 6.2 37 43-86 9-45 (234)
246 3kb6_A D-lactate dehydrogenase 97.3 0.00033 1.1E-08 65.6 6.4 94 43-203 141-236 (334)
247 3don_A Shikimate dehydrogenase 97.3 0.00021 7.2E-09 65.2 4.7 38 43-86 117-155 (277)
248 3v5n_A Oxidoreductase; structu 97.3 0.00074 2.5E-08 64.7 8.7 40 43-87 37-81 (417)
249 3gdo_A Uncharacterized oxidore 97.2 0.0011 3.7E-08 62.1 9.3 92 43-202 5-100 (358)
250 3n58_A Adenosylhomocysteinase; 97.2 0.0016 5.6E-08 63.2 10.6 50 27-83 232-281 (464)
251 1oi7_A Succinyl-COA synthetase 97.2 0.0025 8.5E-08 58.3 11.1 94 42-203 6-102 (288)
252 3dty_A Oxidoreductase, GFO/IDH 97.2 0.00087 3E-08 63.6 8.2 40 43-87 12-56 (398)
253 3o9z_A Lipopolysaccaride biosy 97.2 0.003 1E-07 58.1 11.6 94 42-202 2-107 (312)
254 2ixa_A Alpha-N-acetylgalactosa 97.2 0.0024 8.2E-08 61.5 11.4 84 43-179 20-110 (444)
255 5mdh_A Malate dehydrogenase; o 97.1 0.0017 5.8E-08 60.7 9.7 40 42-82 2-44 (333)
256 3jyo_A Quinate/shikimate dehyd 97.1 0.0017 5.7E-08 59.3 9.5 40 42-87 126-166 (283)
257 3gvp_A Adenosylhomocysteinase 97.1 0.00061 2.1E-08 65.8 6.7 52 26-84 204-255 (435)
258 2axq_A Saccharopine dehydrogen 97.1 0.0013 4.4E-08 64.3 9.1 40 43-87 23-62 (467)
259 1gpj_A Glutamyl-tRNA reductase 97.1 0.001 3.4E-08 63.7 8.0 37 43-85 167-204 (404)
260 1npy_A Hypothetical shikimate 97.1 0.0011 3.8E-08 60.1 7.9 66 14-87 93-158 (271)
261 3oa2_A WBPB; oxidoreductase, s 97.1 0.0037 1.3E-07 57.6 11.5 37 42-84 2-40 (318)
262 2yv2_A Succinyl-COA synthetase 97.1 0.0037 1.3E-07 57.4 11.2 100 36-203 6-109 (297)
263 4ew6_A D-galactose-1-dehydroge 97.1 0.0016 5.5E-08 60.3 8.8 87 43-202 25-116 (330)
264 4dio_A NAD(P) transhydrogenase 97.1 0.00098 3.4E-08 64.0 7.5 39 43-87 190-228 (405)
265 3i23_A Oxidoreductase, GFO/IDH 97.0 0.0024 8.1E-08 59.4 9.7 49 147-202 50-100 (349)
266 3upl_A Oxidoreductase; rossman 97.0 0.0051 1.7E-07 59.7 12.1 53 25-87 10-63 (446)
267 3btv_A Galactose/lactose metab 97.0 0.0015 5.2E-08 62.9 8.3 82 43-180 20-109 (438)
268 4fb5_A Probable oxidoreductase 97.0 0.0037 1.3E-07 58.1 10.5 99 44-202 26-129 (393)
269 3h2z_A Mannitol-1-phosphate 5- 97.0 0.00061 2.1E-08 65.0 5.0 117 44-203 1-127 (382)
270 1hye_A L-lactate/malate dehydr 97.0 0.0044 1.5E-07 57.1 10.7 36 44-83 1-39 (313)
271 2fp4_A Succinyl-COA ligase [GD 97.0 0.0077 2.6E-07 55.5 12.3 93 42-202 12-108 (305)
272 4ina_A Saccharopine dehydrogen 97.0 0.0013 4.3E-08 62.9 7.2 42 43-87 1-42 (405)
273 2vhw_A Alanine dehydrogenase; 97.0 0.00082 2.8E-08 63.7 5.7 39 42-86 167-205 (377)
274 1p77_A Shikimate 5-dehydrogena 96.9 0.0027 9.3E-08 57.2 8.8 40 42-87 118-157 (272)
275 4gmf_A Yersiniabactin biosynth 96.9 0.00089 3E-08 63.5 5.8 72 42-172 6-78 (372)
276 2nvw_A Galactose/lactose metab 96.9 0.0029 1E-07 61.8 9.6 83 42-180 38-128 (479)
277 2yv1_A Succinyl-COA ligase [AD 96.9 0.0049 1.7E-07 56.5 10.4 94 42-203 12-108 (294)
278 4h3v_A Oxidoreductase domain p 96.9 0.0036 1.2E-07 58.2 9.6 99 44-203 7-111 (390)
279 4gx0_A TRKA domain protein; me 96.9 0.0025 8.6E-08 63.1 8.9 54 27-87 333-386 (565)
280 3oqb_A Oxidoreductase; structu 96.9 0.0025 8.5E-08 59.9 8.1 94 43-202 6-118 (383)
281 3dr3_A N-acetyl-gamma-glutamyl 96.8 0.0058 2E-07 57.2 10.5 102 42-200 3-109 (337)
282 3ff4_A Uncharacterized protein 96.8 0.0022 7.4E-08 51.4 6.5 89 42-203 3-95 (122)
283 2eez_A Alanine dehydrogenase; 96.8 0.00086 2.9E-08 63.2 4.8 39 42-86 165-203 (369)
284 3o8q_A Shikimate 5-dehydrogena 96.8 0.0043 1.5E-07 56.6 9.3 39 43-87 126-165 (281)
285 1x13_A NAD(P) transhydrogenase 96.8 0.0011 3.8E-08 63.4 5.5 39 43-87 172-210 (401)
286 1nyt_A Shikimate 5-dehydrogena 96.8 0.0071 2.4E-07 54.4 10.3 39 43-87 119-157 (271)
287 1lc0_A Biliverdin reductase A; 96.8 0.0053 1.8E-07 55.8 9.4 23 42-64 6-28 (294)
288 3r6d_A NAD-dependent epimerase 96.7 0.0043 1.5E-07 53.1 8.1 38 43-86 4-45 (221)
289 3phh_A Shikimate dehydrogenase 96.7 0.0029 9.9E-08 57.4 7.2 39 43-87 118-156 (269)
290 2czc_A Glyceraldehyde-3-phosph 96.7 0.0072 2.5E-07 56.2 10.0 38 43-85 2-40 (334)
291 1vl6_A Malate oxidoreductase; 96.7 0.0052 1.8E-07 58.5 8.9 102 41-200 190-297 (388)
292 1b7g_O Protein (glyceraldehyde 96.7 0.0064 2.2E-07 56.8 9.5 97 43-181 1-98 (340)
293 3fbt_A Chorismate mutase and s 96.7 0.0037 1.3E-07 57.1 7.6 38 43-86 122-160 (282)
294 1cf2_P Protein (glyceraldehyde 96.7 0.0044 1.5E-07 57.9 8.2 36 43-83 1-37 (337)
295 1zud_1 Adenylyltransferase THI 96.6 0.016 5.5E-07 51.7 11.3 36 43-83 28-63 (251)
296 1p9l_A Dihydrodipicolinate red 96.6 0.017 5.9E-07 51.5 11.3 29 44-77 1-30 (245)
297 1l7d_A Nicotinamide nucleotide 96.5 0.0033 1.1E-07 59.6 6.6 40 42-87 171-210 (384)
298 3rui_A Ubiquitin-like modifier 96.5 0.027 9.2E-07 52.7 12.6 36 43-83 34-69 (340)
299 1nvm_B Acetaldehyde dehydrogen 96.5 0.013 4.4E-07 54.1 10.3 38 43-84 4-42 (312)
300 3ip3_A Oxidoreductase, putativ 96.5 0.0048 1.6E-07 57.0 7.2 97 43-202 2-102 (337)
301 1lnq_A MTHK channels, potassiu 96.5 0.0024 8.2E-08 58.9 5.1 37 43-86 115-151 (336)
302 3vh1_A Ubiquitin-like modifier 96.5 0.011 3.8E-07 59.3 10.2 35 43-82 327-361 (598)
303 3qvo_A NMRA family protein; st 96.5 0.0067 2.3E-07 52.7 7.7 39 43-86 23-62 (236)
304 3hsk_A Aspartate-semialdehyde 96.4 0.0074 2.5E-07 57.4 8.2 38 157-200 90-127 (381)
305 1ff9_A Saccharopine reductase; 96.4 0.0075 2.6E-07 58.5 8.2 38 43-86 3-40 (450)
306 4g65_A TRK system potassium up 96.4 0.017 5.8E-07 56.1 10.7 55 26-87 218-272 (461)
307 3do5_A HOM, homoserine dehydro 96.4 0.0079 2.7E-07 56.0 8.0 38 43-85 2-48 (327)
308 1y8q_A Ubiquitin-like 1 activa 96.4 0.028 9.4E-07 52.6 11.7 52 26-82 16-70 (346)
309 1leh_A Leucine dehydrogenase; 96.4 0.007 2.4E-07 57.2 7.6 60 21-86 150-210 (364)
310 1sb8_A WBPP; epimerase, 4-epim 96.4 0.0041 1.4E-07 57.1 5.8 56 19-83 4-62 (352)
311 1ys4_A Aspartate-semialdehyde 96.4 0.013 4.4E-07 55.0 9.3 33 44-81 9-42 (354)
312 3h5n_A MCCB protein; ubiquitin 96.3 0.029 1E-06 52.6 11.7 37 43-84 118-154 (353)
313 4hb9_A Similarities with proba 96.3 0.0032 1.1E-07 58.3 5.0 35 43-83 1-35 (412)
314 3tnl_A Shikimate dehydrogenase 96.3 0.014 4.7E-07 54.1 9.2 34 43-82 154-188 (315)
315 1pjc_A Protein (L-alanine dehy 96.3 0.0088 3E-07 56.1 7.6 39 43-87 167-205 (361)
316 3pwz_A Shikimate dehydrogenase 96.3 0.016 5.5E-07 52.5 9.1 40 43-87 120-159 (272)
317 3h8v_A Ubiquitin-like modifier 96.0 0.057 1.9E-06 49.5 11.6 61 16-82 6-70 (292)
318 3ius_A Uncharacterized conserv 96.0 0.0076 2.6E-07 53.4 5.6 38 43-86 5-42 (286)
319 1tt5_B Ubiquitin-activating en 96.0 0.05 1.7E-06 52.5 11.7 35 44-83 41-75 (434)
320 3ond_A Adenosylhomocysteinase; 96.0 0.017 5.7E-07 56.7 8.2 53 26-85 249-301 (488)
321 3t4e_A Quinate/shikimate dehyd 96.0 0.035 1.2E-06 51.3 9.9 35 43-83 148-183 (312)
322 4gsl_A Ubiquitin-like modifier 96.0 0.038 1.3E-06 55.5 10.8 36 43-83 326-361 (615)
323 3ew7_A LMO0794 protein; Q8Y8U8 95.9 0.0086 2.9E-07 50.7 5.4 37 44-86 1-38 (221)
324 3kkj_A Amine oxidase, flavin-c 95.9 0.0065 2.2E-07 50.8 4.5 33 45-83 4-36 (336)
325 2ozp_A N-acetyl-gamma-glutamyl 95.9 0.029 1E-06 52.4 9.2 37 158-200 66-102 (345)
326 1edz_A 5,10-methylenetetrahydr 95.9 0.0083 2.8E-07 55.8 5.3 37 42-84 176-213 (320)
327 1y7t_A Malate dehydrogenase; N 95.8 0.018 6.1E-07 53.0 7.1 39 43-82 4-45 (327)
328 2x4g_A Nucleoside-diphosphate- 95.7 0.013 4.6E-07 53.0 5.8 39 42-86 12-51 (342)
329 3h2s_A Putative NADH-flavin re 95.7 0.011 3.6E-07 50.4 4.8 37 44-86 1-38 (224)
330 2c5a_A GDP-mannose-3', 5'-epim 95.6 0.0067 2.3E-07 56.5 3.7 60 17-84 5-65 (379)
331 2yyy_A Glyceraldehyde-3-phosph 95.6 0.054 1.8E-06 50.7 9.8 36 43-83 2-38 (343)
332 1xyg_A Putative N-acetyl-gamma 95.6 0.02 6.8E-07 53.9 6.8 33 44-81 17-50 (359)
333 2nqt_A N-acetyl-gamma-glutamyl 95.6 0.026 9E-07 53.0 7.6 38 157-201 77-114 (352)
334 2ph5_A Homospermidine synthase 95.6 0.033 1.1E-06 54.4 8.4 40 43-84 13-52 (480)
335 2gas_A Isoflavone reductase; N 95.5 0.017 5.8E-07 51.6 5.8 34 43-82 2-36 (307)
336 3pwk_A Aspartate-semialdehyde 95.5 0.045 1.6E-06 51.7 8.8 38 157-200 61-98 (366)
337 3v76_A Flavoprotein; structura 95.5 0.011 3.7E-07 56.6 4.5 34 44-83 28-61 (417)
338 3e48_A Putative nucleoside-dip 95.4 0.023 8E-07 50.4 6.4 38 44-86 1-39 (289)
339 1j5p_A Aspartate dehydrogenase 95.4 0.027 9.2E-07 50.6 6.5 45 149-199 49-93 (253)
340 3mtj_A Homoserine dehydrogenas 95.4 0.069 2.4E-06 51.7 9.9 22 43-64 10-31 (444)
341 3rp8_A Flavoprotein monooxygen 95.4 0.017 5.7E-07 54.1 5.4 36 42-83 22-57 (407)
342 4b4o_A Epimerase family protei 95.4 0.018 6E-07 51.6 5.3 34 44-83 1-35 (298)
343 3gpi_A NAD-dependent epimerase 95.3 0.015 5.2E-07 51.6 4.8 36 43-84 3-38 (286)
344 3e8x_A Putative NAD-dependent 95.3 0.023 7.8E-07 49.0 5.8 38 43-86 21-59 (236)
345 2bka_A CC3, TAT-interacting pr 95.3 0.027 9.3E-07 48.5 6.2 37 44-86 19-58 (242)
346 3c8m_A Homoserine dehydrogenas 95.3 0.061 2.1E-06 49.9 8.9 41 43-86 6-52 (331)
347 2ywl_A Thioredoxin reductase r 95.3 0.02 6.7E-07 47.3 5.0 35 43-83 1-35 (180)
348 2a9f_A Putative malic enzyme ( 95.3 0.021 7.1E-07 54.5 5.7 100 40-200 185-292 (398)
349 2rgh_A Alpha-glycerophosphate 95.2 0.021 7E-07 56.8 5.8 48 25-82 18-65 (571)
350 2ep5_A 350AA long hypothetical 95.2 0.095 3.3E-06 48.9 10.0 36 158-199 75-110 (350)
351 3rih_A Short chain dehydrogena 95.1 0.026 9E-07 51.1 5.8 63 19-87 6-80 (293)
352 1y8q_B Anthracycline-, ubiquit 95.1 0.24 8.3E-06 50.0 13.2 39 44-87 18-56 (640)
353 3ihm_A Styrene monooxygenase A 95.1 0.017 5.7E-07 55.1 4.6 33 44-82 23-55 (430)
354 2r00_A Aspartate-semialdehyde 95.0 0.076 2.6E-06 49.4 8.8 34 43-79 3-37 (336)
355 3slg_A PBGP3 protein; structur 95.0 0.029 1E-06 51.6 5.9 57 19-86 6-63 (372)
356 3dhn_A NAD-dependent epimerase 95.0 0.019 6.3E-07 49.0 4.2 38 43-86 4-42 (227)
357 1hdo_A Biliverdin IX beta redu 95.0 0.029 9.8E-07 46.7 5.3 36 44-85 4-40 (206)
358 3qj4_A Renalase; FAD/NAD(P)-bi 95.0 0.02 6.9E-07 52.2 4.7 34 43-82 1-37 (342)
359 3eag_A UDP-N-acetylmuramate:L- 95.0 0.054 1.9E-06 49.9 7.5 36 42-83 3-39 (326)
360 2ejw_A HDH, homoserine dehydro 95.0 0.04 1.4E-06 51.3 6.6 23 43-65 3-25 (332)
361 3dqp_A Oxidoreductase YLBE; al 95.0 0.021 7.2E-07 48.7 4.4 37 44-86 1-38 (219)
362 3dfz_A SIRC, precorrin-2 dehyd 95.0 0.059 2E-06 47.4 7.4 36 41-82 29-64 (223)
363 4dpl_A Malonyl-COA/succinyl-CO 94.9 0.051 1.8E-06 51.1 7.3 38 157-200 76-113 (359)
364 4dpk_A Malonyl-COA/succinyl-CO 94.9 0.051 1.8E-06 51.1 7.3 38 157-200 76-113 (359)
365 1qyd_A Pinoresinol-lariciresin 94.9 0.027 9.1E-07 50.4 5.1 35 43-83 4-39 (313)
366 2xdo_A TETX2 protein; tetracyc 94.9 0.03 1E-06 52.4 5.6 35 43-83 26-60 (398)
367 3ruf_A WBGU; rossmann fold, UD 94.9 0.037 1.3E-06 50.4 6.1 48 28-84 13-61 (351)
368 3i6i_A Putative leucoanthocyan 94.8 0.033 1.1E-06 51.0 5.6 34 43-82 10-44 (346)
369 1tt5_A APPBP1, amyloid protein 94.8 0.14 4.8E-06 50.7 10.4 55 27-86 13-70 (531)
370 2nvu_B Maltose binding protein 94.7 0.17 5.9E-06 52.1 11.4 41 43-88 411-451 (805)
371 1ryi_A Glycine oxidase; flavop 94.7 0.028 9.6E-07 51.7 4.8 35 42-82 16-50 (382)
372 3tum_A Shikimate dehydrogenase 94.7 0.12 4.2E-06 46.6 8.8 40 43-87 125-164 (269)
373 1c0p_A D-amino acid oxidase; a 94.6 0.04 1.4E-06 50.6 5.7 34 43-82 6-39 (363)
374 2csu_A 457AA long hypothetical 94.6 0.076 2.6E-06 51.5 7.9 89 43-201 8-100 (457)
375 1yvv_A Amine oxidase, flavin-c 94.6 0.029 9.9E-07 50.6 4.6 33 44-82 3-35 (336)
376 3nrn_A Uncharacterized protein 94.6 0.032 1.1E-06 52.4 5.1 33 44-82 1-33 (421)
377 2q1s_A Putative nucleotide sug 94.6 0.034 1.2E-06 51.5 5.2 55 25-84 14-69 (377)
378 3tz6_A Aspartate-semialdehyde 94.5 0.12 4E-06 48.4 8.5 38 157-200 60-97 (344)
379 2qa1_A PGAE, polyketide oxygen 94.4 0.029 9.9E-07 54.7 4.5 36 43-84 11-46 (500)
380 3oz2_A Digeranylgeranylglycero 94.4 0.034 1.2E-06 50.8 4.5 32 46-83 7-38 (397)
381 1xg5_A ARPG836; short chain de 94.3 0.04 1.4E-06 48.9 4.9 38 44-87 33-71 (279)
382 4g6h_A Rotenone-insensitive NA 94.3 0.03 1E-06 54.8 4.2 36 42-83 41-76 (502)
383 2b69_A UDP-glucuronate decarbo 94.3 0.048 1.7E-06 49.6 5.4 36 42-83 26-62 (343)
384 3ing_A Homoserine dehydrogenas 94.2 0.095 3.2E-06 48.6 7.3 23 43-65 4-26 (325)
385 1ebf_A Homoserine dehydrogenas 94.2 0.07 2.4E-06 50.1 6.5 24 42-65 3-26 (358)
386 3ka7_A Oxidoreductase; structu 94.2 0.041 1.4E-06 51.4 4.8 33 44-82 1-33 (425)
387 2gf3_A MSOX, monomeric sarcosi 94.2 0.045 1.5E-06 50.3 5.1 33 44-82 4-36 (389)
388 3h8l_A NADH oxidase; membrane 94.2 0.045 1.5E-06 51.3 5.1 35 43-83 1-38 (409)
389 3ngx_A Bifunctional protein fo 94.2 0.078 2.7E-06 48.1 6.4 34 42-81 149-183 (276)
390 3ppi_A 3-hydroxyacyl-COA dehyd 94.2 0.054 1.8E-06 48.1 5.3 38 44-87 31-69 (281)
391 3lk7_A UDP-N-acetylmuramoylala 94.1 0.058 2E-06 51.9 5.7 35 43-83 9-43 (451)
392 2hjs_A USG-1 protein homolog; 94.1 0.13 4.5E-06 47.8 8.0 23 43-65 6-29 (340)
393 3p2o_A Bifunctional protein fo 94.1 0.11 3.6E-06 47.5 7.1 33 43-81 160-193 (285)
394 3dme_A Conserved exported prot 94.0 0.048 1.6E-06 49.4 4.8 33 44-82 5-37 (369)
395 3i3l_A Alkylhalidase CMLS; fla 94.0 0.031 1.1E-06 55.9 3.8 33 44-82 24-56 (591)
396 1nvt_A Shikimate 5'-dehydrogen 94.0 0.086 2.9E-06 47.5 6.4 65 14-87 101-165 (287)
397 2vou_A 2,6-dihydroxypyridine h 94.0 0.057 2E-06 50.4 5.3 35 43-83 5-39 (397)
398 4dgk_A Phytoene dehydrogenase; 94.0 0.034 1.2E-06 53.4 3.8 34 43-82 1-34 (501)
399 1u8f_O GAPDH, glyceraldehyde-3 94.0 0.081 2.8E-06 49.3 6.3 22 44-65 4-25 (335)
400 3itj_A Thioredoxin reductase 1 94.0 0.041 1.4E-06 49.3 4.1 35 42-82 21-55 (338)
401 3cmm_A Ubiquitin-activating en 93.9 0.27 9.1E-06 52.3 10.9 56 26-86 7-65 (1015)
402 1t2a_A GDP-mannose 4,6 dehydra 93.9 0.062 2.1E-06 49.5 5.4 35 44-84 25-60 (375)
403 2e4g_A Tryptophan halogenase; 93.9 0.062 2.1E-06 52.9 5.5 35 42-82 24-61 (550)
404 1b0a_A Protein (fold bifunctio 93.8 0.095 3.2E-06 47.9 6.2 34 42-81 158-192 (288)
405 2b4q_A Rhamnolipids biosynthes 93.8 0.053 1.8E-06 48.4 4.5 37 44-86 30-67 (276)
406 3l07_A Bifunctional protein fo 93.8 0.12 4.2E-06 47.0 7.0 33 43-81 161-194 (285)
407 2uzz_A N-methyl-L-tryptophan o 93.8 0.043 1.5E-06 50.2 4.0 33 44-82 3-35 (372)
408 1yb1_A 17-beta-hydroxysteroid 93.8 0.088 3E-06 46.6 5.9 39 43-87 31-70 (272)
409 1y56_B Sarcosine oxidase; dehy 93.7 0.051 1.7E-06 50.0 4.4 33 44-82 6-38 (382)
410 3alj_A 2-methyl-3-hydroxypyrid 93.7 0.065 2.2E-06 49.6 5.2 35 43-83 11-45 (379)
411 1a4i_A Methylenetetrahydrofola 93.7 0.14 4.6E-06 47.1 7.1 34 42-81 164-198 (301)
412 3fbs_A Oxidoreductase; structu 93.7 0.069 2.4E-06 46.8 5.0 33 44-82 3-35 (297)
413 4a26_A Putative C-1-tetrahydro 93.7 0.098 3.4E-06 48.0 6.1 33 43-81 165-198 (300)
414 3dje_A Fructosyl amine: oxygen 93.6 0.073 2.5E-06 50.1 5.4 34 44-83 7-41 (438)
415 2bry_A NEDD9 interacting prote 93.6 0.084 2.9E-06 51.4 5.9 37 41-83 90-126 (497)
416 3nix_A Flavoprotein/dehydrogen 93.6 0.054 1.9E-06 50.5 4.4 33 44-82 6-38 (421)
417 2dvm_A Malic enzyme, 439AA lon 93.6 0.096 3.3E-06 50.6 6.2 33 43-81 186-225 (439)
418 2oln_A NIKD protein; flavoprot 93.6 0.065 2.2E-06 49.7 4.9 33 44-82 5-37 (397)
419 3tjr_A Short chain dehydrogena 93.6 0.1 3.5E-06 47.1 6.1 39 43-87 31-70 (301)
420 3f8d_A Thioredoxin reductase ( 93.6 0.075 2.6E-06 47.1 5.1 33 43-81 15-47 (323)
421 1vkn_A N-acetyl-gamma-glutamyl 93.5 0.16 5.3E-06 47.7 7.4 98 41-200 11-110 (351)
422 2dkn_A 3-alpha-hydroxysteroid 93.5 0.079 2.7E-06 45.6 5.0 37 43-85 1-38 (255)
423 3ko8_A NAD-dependent epimerase 93.4 0.082 2.8E-06 47.2 5.2 36 44-85 1-37 (312)
424 3cgv_A Geranylgeranyl reductas 93.4 0.067 2.3E-06 49.2 4.7 34 44-83 5-38 (397)
425 2x3n_A Probable FAD-dependent 93.4 0.066 2.3E-06 49.8 4.7 35 43-83 6-40 (399)
426 4id9_A Short-chain dehydrogena 93.4 0.068 2.3E-06 48.5 4.7 37 42-84 18-55 (347)
427 3e5r_O PP38, glyceraldehyde-3- 93.4 0.16 5.5E-06 47.3 7.2 22 44-65 4-25 (337)
428 2gv8_A Monooxygenase; FMO, FAD 93.3 0.086 2.9E-06 50.2 5.3 34 43-82 6-41 (447)
429 3vps_A TUNA, NAD-dependent epi 93.3 0.081 2.8E-06 47.1 4.9 35 43-83 7-42 (321)
430 3oh8_A Nucleoside-diphosphate 93.3 0.17 5.7E-06 49.3 7.5 36 43-84 147-183 (516)
431 2i0z_A NAD(FAD)-utilizing dehy 93.3 0.069 2.3E-06 51.0 4.6 34 44-83 27-60 (447)
432 2o7s_A DHQ-SDH PR, bifunctiona 93.2 0.13 4.5E-06 50.5 6.7 38 44-87 365-402 (523)
433 1c1d_A L-phenylalanine dehydro 93.2 0.2 6.9E-06 47.0 7.6 49 29-83 161-209 (355)
434 3k31_A Enoyl-(acyl-carrier-pro 93.2 0.11 3.8E-06 46.8 5.7 38 43-86 30-70 (296)
435 1t4b_A Aspartate-semialdehyde 93.2 0.36 1.2E-05 45.4 9.4 41 153-200 59-101 (367)
436 4a5o_A Bifunctional protein fo 93.2 0.16 5.4E-06 46.4 6.6 33 43-81 161-194 (286)
437 2bi7_A UDP-galactopyranose mut 93.2 0.087 3E-06 49.4 5.1 34 44-83 4-37 (384)
438 3nks_A Protoporphyrinogen oxid 93.1 0.072 2.5E-06 50.6 4.6 34 43-82 2-37 (477)
439 3c96_A Flavin-containing monoo 93.1 0.089 3E-06 49.3 5.1 34 44-83 5-39 (410)
440 4eso_A Putative oxidoreductase 93.1 0.13 4.6E-06 45.1 6.0 40 42-87 7-47 (255)
441 1k0i_A P-hydroxybenzoate hydro 93.1 0.074 2.5E-06 49.3 4.5 34 44-83 3-36 (394)
442 2fk8_A Methoxy mycolic acid sy 93.1 1.9 6.6E-05 38.5 13.9 117 16-186 62-186 (318)
443 1mo9_A ORF3; nucleotide bindin 93.1 0.12 4.2E-06 50.4 6.2 34 43-82 43-76 (523)
444 2jae_A L-amino acid oxidase; o 93.1 0.085 2.9E-06 50.5 5.0 34 43-82 11-44 (489)
445 3g3e_A D-amino-acid oxidase; F 93.1 0.087 3E-06 48.0 4.8 38 44-82 1-39 (351)
446 3p1w_A Rabgdi protein; GDI RAB 93.0 0.06 2E-06 52.6 3.8 49 20-82 5-53 (475)
447 2r0c_A REBC; flavin adenine di 93.0 0.071 2.4E-06 52.5 4.4 34 44-83 27-60 (549)
448 3fpf_A Mtnas, putative unchara 93.0 0.36 1.2E-05 44.2 8.8 101 42-199 122-225 (298)
449 3gem_A Short chain dehydrogena 93.0 0.079 2.7E-06 46.9 4.3 51 26-85 13-64 (260)
450 3d7l_A LIN1944 protein; APC893 93.0 0.11 3.9E-06 43.3 5.0 35 42-83 2-37 (202)
451 2q7v_A Thioredoxin reductase; 93.0 0.09 3.1E-06 47.2 4.7 33 43-81 8-40 (325)
452 2iid_A L-amino-acid oxidase; f 93.0 0.16 5.5E-06 48.6 6.8 35 42-82 32-66 (498)
453 3c1o_A Eugenol synthase; pheny 92.9 0.081 2.8E-06 47.5 4.3 35 42-82 3-38 (321)
454 2qa2_A CABE, polyketide oxygen 92.9 0.097 3.3E-06 50.9 5.2 37 42-84 11-47 (499)
455 1rpn_A GDP-mannose 4,6-dehydra 92.9 0.11 3.8E-06 46.8 5.3 41 38-84 9-50 (335)
456 2c20_A UDP-glucose 4-epimerase 92.9 0.11 3.9E-06 46.6 5.3 35 43-83 1-36 (330)
457 3d1c_A Flavin-containing putat 92.9 0.091 3.1E-06 47.9 4.7 33 44-82 5-38 (369)
458 3v8b_A Putative dehydrogenase, 92.8 0.14 4.6E-06 45.9 5.6 38 44-87 29-67 (283)
459 4da9_A Short-chain dehydrogena 92.8 0.16 5.5E-06 45.3 6.1 38 43-86 29-68 (280)
460 4dqx_A Probable oxidoreductase 92.8 0.13 4.4E-06 45.9 5.4 38 44-87 28-66 (277)
461 3nyc_A D-arginine dehydrogenas 92.8 0.063 2.2E-06 49.0 3.4 33 43-82 9-41 (381)
462 1qyc_A Phenylcoumaran benzylic 92.7 0.084 2.9E-06 47.0 4.1 35 43-83 4-39 (308)
463 2c07_A 3-oxoacyl-(acyl-carrier 92.7 0.11 3.9E-06 46.2 5.0 37 44-86 45-82 (285)
464 3r9u_A Thioredoxin reductase; 92.7 0.1 3.5E-06 46.2 4.6 34 42-81 3-37 (315)
465 4a9w_A Monooxygenase; baeyer-v 92.7 0.088 3E-06 47.3 4.3 34 44-83 4-37 (357)
466 2aqj_A Tryptophan halogenase, 92.7 0.11 3.8E-06 50.7 5.3 34 43-82 5-41 (538)
467 2zbw_A Thioredoxin reductase; 92.7 0.11 3.8E-06 46.7 4.9 35 43-83 5-39 (335)
468 3k7m_X 6-hydroxy-L-nicotine ox 92.7 0.093 3.2E-06 49.1 4.6 34 43-82 1-34 (431)
469 3guy_A Short-chain dehydrogena 92.7 0.11 3.8E-06 44.6 4.6 39 43-87 1-40 (230)
470 3rkr_A Short chain oxidoreduct 92.6 0.13 4.3E-06 45.3 5.1 54 26-87 14-68 (262)
471 3nkl_A UDP-D-quinovosamine 4-d 92.6 1.1 3.7E-05 35.2 10.3 36 42-82 3-39 (141)
472 2wsb_A Galactitol dehydrogenas 92.6 0.14 4.6E-06 44.4 5.2 38 44-87 12-50 (254)
473 3ioy_A Short-chain dehydrogena 92.6 0.16 5.6E-06 46.2 5.9 40 42-87 7-47 (319)
474 2weu_A Tryptophan 5-halogenase 92.5 0.087 3E-06 50.9 4.2 33 44-82 3-38 (511)
475 3lzw_A Ferredoxin--NADP reduct 92.5 0.1 3.5E-06 46.5 4.4 35 43-83 7-41 (332)
476 3v2g_A 3-oxoacyl-[acyl-carrier 92.5 0.19 6.5E-06 44.6 6.1 51 26-82 14-65 (271)
477 2r6j_A Eugenol synthase 1; phe 92.5 0.11 3.7E-06 46.7 4.5 34 44-83 12-46 (318)
478 3fmw_A Oxygenase; mithramycin, 92.4 0.099 3.4E-06 51.9 4.5 34 44-83 50-83 (570)
479 1lu9_A Methylene tetrahydromet 92.4 0.15 5.2E-06 45.7 5.4 39 43-87 119-158 (287)
480 4gx0_A TRKA domain protein; me 92.4 0.11 3.7E-06 51.3 4.7 41 41-87 125-165 (565)
481 1xhl_A Short-chain dehydrogena 92.3 0.13 4.3E-06 46.5 4.8 38 44-87 27-65 (297)
482 2pzm_A Putative nucleotide sug 92.3 0.17 5.9E-06 45.7 5.7 35 43-83 20-55 (330)
483 3cxt_A Dehydrogenase with diff 92.3 0.18 6.1E-06 45.4 5.7 38 44-87 35-73 (291)
484 2z1m_A GDP-D-mannose dehydrata 92.3 0.15 5E-06 45.9 5.1 36 44-85 4-40 (345)
485 4ibo_A Gluconate dehydrogenase 92.3 0.083 2.8E-06 47.0 3.4 38 44-87 27-65 (271)
486 3m2p_A UDP-N-acetylglucosamine 92.2 0.16 5.6E-06 45.3 5.4 35 43-83 2-37 (311)
487 1y0p_A Fumarate reductase flav 92.2 0.16 5.3E-06 50.2 5.6 46 32-83 115-160 (571)
488 3pzr_A Aspartate-semialdehyde 92.2 0.5 1.7E-05 44.6 8.9 40 153-199 58-99 (370)
489 3uw3_A Aspartate-semialdehyde 92.1 0.57 1.9E-05 44.3 9.1 41 153-200 62-104 (377)
490 3uf0_A Short-chain dehydrogena 92.1 0.22 7.4E-06 44.3 6.0 34 43-82 31-65 (273)
491 1y1p_A ARII, aldehyde reductas 92.1 0.16 5.5E-06 45.6 5.2 38 43-86 11-49 (342)
492 3o38_A Short chain dehydrogena 92.1 0.16 5.6E-06 44.5 5.1 39 43-87 22-62 (266)
493 4fgs_A Probable dehydrogenase 92.0 0.22 7.6E-06 44.9 6.0 38 44-87 30-68 (273)
494 3l77_A Short-chain alcohol deh 92.0 0.22 7.4E-06 42.7 5.7 39 43-87 2-41 (235)
495 3two_A Mannitol dehydrogenase; 92.0 0.18 6.3E-06 46.3 5.5 38 43-86 177-214 (348)
496 3h28_A Sulfide-quinone reducta 91.9 0.16 5.5E-06 48.0 5.2 35 44-84 3-39 (430)
497 2q0l_A TRXR, thioredoxin reduc 91.9 0.14 4.9E-06 45.4 4.6 33 43-81 1-34 (311)
498 2q1w_A Putative nucleotide sug 91.9 0.18 6.3E-06 45.6 5.4 35 43-83 21-56 (333)
499 3e1t_A Halogenase; flavoprotei 91.9 0.1 3.4E-06 50.8 3.8 33 44-82 8-40 (512)
500 3lxd_A FAD-dependent pyridine 91.8 0.16 5.4E-06 47.8 5.0 36 42-83 8-45 (415)
No 1
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-40 Score=317.73 Aligned_cols=216 Identities=24% Similarity=0.366 Sum_probs=177.7
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCC-C--CCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGY-L--RDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVE 118 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~-~--~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~ 118 (303)
.+.||+|||+|+||+++|..|+++ |. + ...++|++|.|+++... +.+.+.++..+ +|+.|++++
T Consensus 33 ~p~KI~ViGaGsWGTALA~~la~n-g~~~~~~~~~~V~lw~r~~e~~~----~~~~e~in~~~-------~N~~YLpgv- 99 (391)
T 4fgw_A 33 KPFKVTVIGSGNWGTTIAKVVAEN-CKGYPEVFAPIVQMWVFEEEING----EKLTEIINTRH-------QNVKYLPGI- 99 (391)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHH-HHHCTTTEEEEEEEECCCCBSSS----CBHHHHHTTTC-------CBTTTBTTC-
T ss_pred CCCeEEEECcCHHHHHHHHHHHHc-CCCccccCCceEEEEEcchHhhh----HHHHHHHHhcC-------cCcccCCCC-
Confidence 467999999999999999999998 61 0 00025999999987432 12233455443 478888865
Q ss_pred hhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeec
Q 022050 119 ARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (303)
Q Consensus 119 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~n 198 (303)
+++ .++.+++|+.+++++||+||++||++.++++++++++++++ +.++|+++|
T Consensus 100 ------~Lp------------------~~i~~t~dl~~al~~ad~ii~avPs~~~r~~l~~l~~~~~~---~~~iv~~~K 152 (391)
T 4fgw_A 100 ------TLP------------------DNLVANPDLIDSVKDVDIIVFNIPHQFLPRICSQLKGHVDS---HVRAISCLK 152 (391)
T ss_dssp ------CCC------------------SSEEEESCHHHHHTTCSEEEECSCGGGHHHHHHHHTTTSCT---TCEEEECCC
T ss_pred ------cCC------------------CCcEEeCCHHHHHhcCCEEEEECChhhhHHHHHHhccccCC---CceeEEecc
Confidence 342 37999999999999999999999999999999999999987 789999999
Q ss_pred cCccccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHHHhccCceEEEE-eCC---------hhhHHHHHHHhcCCC
Q 022050 199 GVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARI-CGA---------EKWRKPLAKFLRRPH 268 (303)
Q Consensus 199 Gi~~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~ev~~g~~~~~~~-~~~---------~~~~~~i~~lf~~~g 268 (303)
|++..+ +...++++++.+.++. ++++++||+||.|++.+.|+.+++ +.+ +...+.++++|++++
T Consensus 153 Gie~~~---~~~~~~se~i~e~~~~---~~~vLsGPs~A~EVa~~~pta~~iA~~~~~~~~~~~~~~~a~~~~~lf~~~~ 226 (391)
T 4fgw_A 153 GFEVGA---KGVQLLSSYITEELGI---QCGALSGANIATEVAQEHWSETTVAYHIPKDFRGEGKDVDHKVLKALFHRPY 226 (391)
T ss_dssp SCEEET---TEEECHHHHHHHHHCC---EEEEEECSCCHHHHHTTCCEEEEEECCCCTTCCCSSSSCCHHHHHHHHCBTT
T ss_pred cccccc---ccchhHHHHHHHHhCc---cceeccCCchHHHhhcCCCceEEEEecChhhhhhhhHHHHHHHHHHHhCCCC
Confidence 998752 1346789999998873 578999999999999999987665 332 124688999999999
Q ss_pred eEEEecCChhHHHHHHHHHHHHHHHHHHHhhhcCC
Q 022050 269 FTVWDNGDLVTHEVMGGLKNVYAIGAGTIYFLVMS 303 (303)
Q Consensus 269 ~~~~~~~Di~g~e~~~~lkNv~Ai~~G~~~gl~~~ 303 (303)
|++|.++|++|+|+||+||||||||+||++||+++
T Consensus 227 frvy~s~DviGvElgGAlKNViAIAaGi~dGlg~G 261 (391)
T 4fgw_A 227 FHVSVIEDVAGISICGALKNVVALGCGFVEGLGWG 261 (391)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCH
T ss_pred EEEEEeCCccceehHHHHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999999999999863
No 2
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=100.00 E-value=4.3e-36 Score=286.15 Aligned_cols=204 Identities=23% Similarity=0.339 Sum_probs=177.3
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
.+|||+|||+|+||+++|..|+++ | ++|++|+|++++++.++..+ .|+.|+++.
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~-G-----~~V~l~~r~~~~~~~i~~~~----------------~~~~~l~g~---- 81 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARK-G-----QKVRLWSYESDHVDEMQAEG----------------VNNRYLPNY---- 81 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTT-T-----CCEEEECSCHHHHHHHHHHS----------------SBTTTBTTC----
T ss_pred cCCeEEEECccHHHHHHHHHHHHC-C-----CeEEEEeCCHHHHHHHHHcC----------------CCcccCCCC----
Confidence 358999999999999999999999 8 89999999998877654322 244555543
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeeccCc
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nGi~ 201 (303)
.++ .++.+++|++++++++|+||++||+++++++++++.+++++ +++|++++||+.
T Consensus 82 ---~l~------------------~~i~~t~d~~ea~~~aDvVilaVp~~~~~~vl~~i~~~l~~---~~ivvs~~kGi~ 137 (356)
T 3k96_A 82 ---PFP------------------ETLKAYCDLKASLEGVTDILIVVPSFAFHEVITRMKPLIDA---KTRIAWGTKGLA 137 (356)
T ss_dssp ---CCC------------------TTEEEESCHHHHHTTCCEEEECCCHHHHHHHHHHHGGGCCT---TCEEEECCCSCB
T ss_pred ---ccC------------------CCeEEECCHHHHHhcCCEEEECCCHHHHHHHHHHHHHhcCC---CCEEEEEeCCCC
Confidence 221 36888999998999999999999999999999999999987 789999999999
Q ss_pred cccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHHHhccCceEEEE-eCChhhHHHHHHHhcCCCeEEEecCChhHH
Q 022050 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARI-CGAEKWRKPLAKFLRRPHFTVWDNGDLVTH 280 (303)
Q Consensus 202 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~ev~~g~~~~~~~-~~~~~~~~~i~~lf~~~g~~~~~~~Di~g~ 280 (303)
++ + .++++++.+.++. .++++++||+++.+++.+.++.+++ +.+.+..+.++++|++.+|+++.++|++|+
T Consensus 138 ~~-----t-~~~se~i~~~l~~--~~~~vlsgP~~a~ev~~g~pt~~via~~~~~~~~~v~~lf~~~~~rv~~~~Di~g~ 209 (356)
T 3k96_A 138 KG-----S-RLLHEVVATELGQ--VPMAVISGPSLATEVAANLPTAVSLASNNSQFSKDLIERLHGQRFRVYKNDDMIGV 209 (356)
T ss_dssp TT-----T-BCHHHHHHHHHCS--CCEEEEESSCCHHHHHTTCCEEEEEEESCHHHHHHHHHHHCCSSEEEEEESCHHHH
T ss_pred cC-----c-cCHHHHHHHHcCC--CCEEEEECccHHHHHHcCCCeEEEEecCCHHHHHHHHHHhCCCCeeEEEeCCHHHH
Confidence 86 4 7889999999873 4578999999999999999877665 567788999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCC
Q 022050 281 EVMGGLKNVYAIGAGTIYFLVMS 303 (303)
Q Consensus 281 e~~~~lkNv~Ai~~G~~~gl~~~ 303 (303)
||+|++||||||++|+++|++++
T Consensus 210 e~~galkNviaia~G~~~gl~~g 232 (356)
T 3k96_A 210 ELCGSVKNILAIATGISDGLKLG 232 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHhhccCC
Confidence 99999999999999999999864
No 3
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=99.96 E-value=3.6e-28 Score=231.93 Aligned_cols=209 Identities=23% Similarity=0.307 Sum_probs=165.5
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCC--CeeEEEEecCCc-----hhhhhhhhhHHHHHhhhhhHHHHhhhhcccch
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRD--KVLIRIWRRPGR-----SVDRATAEHLFEVINSREDVLRRLIRRCAYLK 115 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~--~~~V~l~~r~~~-----~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~ 115 (303)
+|||+|||+|+||+++|..|+++ |...+ .++|++|+|+++ +++.++..+ .++.+++
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~-G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~----------------~~~~~~~ 83 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTN-AKNNYLFENEVRMWIRDEFVNGERMVDIINNKH----------------ENTKYLK 83 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHH-HHHCTTBCSCEEEECCSCC---CCHHHHHHHHC----------------BCTTTST
T ss_pred CCEEEEECcCHHHHHHHHHHHHc-CCccCCCCCeEEEEECChhhhhHHHHHHHHhcC----------------cccccCC
Confidence 57999999999999999999998 61000 058999999987 555433211 1222333
Q ss_pred hhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHH----HhhccCCCC
Q 022050 116 YVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISR----YWKERITVP 191 (303)
Q Consensus 116 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~----~l~~~~~~~ 191 (303)
+. .+ ..++.+++|++++++++|+||++||+++++++++++.+ ++++ ++
T Consensus 84 ~~-------~~------------------~~~i~~~~~~~ea~~~aDvVilav~~~~~~~vl~~i~~~~~~~l~~---~~ 135 (375)
T 1yj8_A 84 GV-------PL------------------PHNIVAHSDLASVINDADLLIFIVPCQYLESVLASIKESESIKIAS---HA 135 (375)
T ss_dssp TC-------BC------------------CTTEEEESSTHHHHTTCSEEEECCCHHHHHHHHHHHTC---CCCCT---TC
T ss_pred cc-------cC------------------cCCeEEECCHHHHHcCCCEEEEcCCHHHHHHHHHHHhhhhhccCCC---CC
Confidence 21 11 02577888888888999999999999999999999988 8877 78
Q ss_pred EEEEeeccCccccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHHHhccCceEEEE-eCChhhHHHHHHHhcCCCeE
Q 022050 192 VIISLAKGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARI-CGAEKWRKPLAKFLRRPHFT 270 (303)
Q Consensus 192 iivs~~nGi~~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~ev~~g~~~~~~~-~~~~~~~~~i~~lf~~~g~~ 270 (303)
+|++++||+.+.. .+...+++.+.+.++ .+..++.||+++.++..+.+..++. +.+.+..+.++++|+..+++
T Consensus 136 ivvs~~~Gi~~~~---~~~~~l~~~l~~~~~---~~~~v~~gp~~a~~v~~g~~~~~~~~~~~~~~~~~v~~ll~~~g~~ 209 (375)
T 1yj8_A 136 KAISLTKGFIVKK---NQMKLCSNYISDFLN---IPCSALSGANIAMDVAMENFSEATIGGNDKDSLVIWQRVFDLPYFK 209 (375)
T ss_dssp EEEECCCSCEEET---TEEECHHHHHHHHSS---SCEEEEECSCCHHHHHTTCCEEEEEECSCHHHHHHHHHHHCBTTEE
T ss_pred EEEEeCCccccCC---ccccCHHHHHHHHcC---CCEEEEeCCchHHHHHhCCCeEEEEecCCHHHHHHHHHHhCCCCeE
Confidence 9999999998730 123567788877765 2467899999999999888766555 45667789999999999999
Q ss_pred EEecCChhHHHHHHHHHHHHHHHHHHHhhhcC
Q 022050 271 VWDNGDLVTHEVMGGLKNVYAIGAGTIYFLVM 302 (303)
Q Consensus 271 ~~~~~Di~g~e~~~~lkNv~Ai~~G~~~gl~~ 302 (303)
++.++|+.+++|+|++||++++++|+++|+.+
T Consensus 210 ~~~~~di~~~~~~k~l~N~~~~~~g~~~~~~~ 241 (375)
T 1yj8_A 210 INCVNETIEVEICGALKNIITLACGFCDGLNL 241 (375)
T ss_dssp EEEESCSHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 99999999999999999999999999999875
No 4
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=99.95 E-value=5.9e-26 Score=213.97 Aligned_cols=209 Identities=25% Similarity=0.351 Sum_probs=163.0
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCC--CeeEEEEecCCc-----hhhhhhhhhHHHHHhhhhhHHHHhhhhcccch
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRD--KVLIRIWRRPGR-----SVDRATAEHLFEVINSREDVLRRLIRRCAYLK 115 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~--~~~V~l~~r~~~-----~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~ 115 (303)
+|||+|||+|+||+++|..|+++ |...+ .++|++|+|+++ +.+.++..+ .+..+++
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~-g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~----------------~~~~~~~ 70 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGN-AAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQH----------------ENVKYLP 70 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-HHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHS----------------CCTTTST
T ss_pred CCeEEEECCCHHHHHHHHHHHhc-CCcccCCCCeEEEEEcChhhhhhHHHHHHHhcC----------------cccccCC
Confidence 47999999999999999999988 51000 068999999987 444332111 1111222
Q ss_pred hhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEE
Q 022050 116 YVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIIS 195 (303)
Q Consensus 116 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs 195 (303)
+. .+ ..++.+++|+.++++++|+||++||++.+++++++|.+++++ +++|++
T Consensus 71 ~~-------~~------------------~~~~~~~~~~~~~~~~aD~Vilav~~~~~~~v~~~i~~~l~~---~~ivv~ 122 (354)
T 1x0v_A 71 GH-------KL------------------PPNVVAVPDVVQAAEDADILIFVVPHQFIGKICDQLKGHLKA---NATGIS 122 (354)
T ss_dssp TC-------CC------------------CTTEEEESSHHHHHTTCSEEEECCCGGGHHHHHHHHTTCSCT---TCEEEE
T ss_pred cc-------cC------------------ccCeEEEcCHHHHHcCCCEEEEeCCHHHHHHHHHHHHhhCCC---CCEEEE
Confidence 11 11 025777888888889999999999999999999999998887 789999
Q ss_pred eeccCccccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHHHhccCceEEEE-eCChhhHHHHHHHhcCCCeEEEec
Q 022050 196 LAKGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARI-CGAEKWRKPLAKFLRRPHFTVWDN 274 (303)
Q Consensus 196 ~~nGi~~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~ev~~g~~~~~~~-~~~~~~~~~i~~lf~~~g~~~~~~ 274 (303)
++||+..+. .+...+++.+.++++ .+..++.||+++.++..+.+..++. +.+.+..+.++++|+..+++++.+
T Consensus 123 ~~~Gi~~~~---~~~~~l~~~l~~~~~---~~~~v~~gp~~a~~v~~g~~~~~~~~~~~~~~~~~v~~ll~~~g~~~~~~ 196 (354)
T 1x0v_A 123 LIKGVDEGP---NGLKLISEVIGERLG---IPMSVLMGANIASEVADEKFCETTIGCKDPAQGQLLKELMQTPNFRITVV 196 (354)
T ss_dssp CCCCBCSSS---SSCCBHHHHHHHHHT---CCEEEEECSCCHHHHHTTCCEEEEEECSSHHHHHHHHHHHCBTTEEEEEE
T ss_pred ECCccCCCC---CccccHHHHHHHHcC---CCEEEEECCCcHHHHHhcCCceEEEEECCHHHHHHHHHHhCCCCEEEEEc
Confidence 999998520 123567777877775 2467899999999998887765554 455677899999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHhhhcC
Q 022050 275 GDLVTHEVMGGLKNVYAIGAGTIYFLVM 302 (303)
Q Consensus 275 ~Di~g~e~~~~lkNv~Ai~~G~~~gl~~ 302 (303)
+|+.+++|++++||++++++|+++|+.+
T Consensus 197 ~di~~~~~~k~~~N~~~~~~g~~~~~~~ 224 (354)
T 1x0v_A 197 QEVDTVEICGALKNVVAVGAGFCDGLGF 224 (354)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCchHhHHHHHHHHHHHHHHHHHHHccC
Confidence 9999999999999999999999999875
No 5
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=99.94 E-value=3.1e-26 Score=215.24 Aligned_cols=194 Identities=27% Similarity=0.447 Sum_probs=156.7
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
.+|||+|||+|+||+++|..|+++ | ++|++|+|++++++.+++++ .+. ++++.
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~-G-----~~V~~~~r~~~~~~~l~~~g----------------~~~-~~~~~---- 65 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHEN-G-----EEVILWARRKEIVDLINVSH----------------TSP-YVEES---- 65 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSHHHHHHHHHHS----------------CBT-TBTTC----
T ss_pred cCCcEEEECcCHHHHHHHHHHHhC-C-----CeEEEEeCCHHHHHHHHHhC----------------Ccc-cCCCC----
Confidence 359999999999999999999999 8 99999999988776544321 011 22221
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeeccCc
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nGi~ 201 (303)
. .++.+++++.+ ++++|+||++||+++++++++++.+ + +++||+++||++
T Consensus 66 ---~--------------------~~~~~~~~~~~-~~~aDvVil~vk~~~~~~v~~~l~~---~---~~~vv~~~nGi~ 115 (335)
T 1z82_A 66 ---K--------------------ITVRATNDLEE-IKKEDILVIAIPVQYIREHLLRLPV---K---PSMVLNLSKGIE 115 (335)
T ss_dssp ---C--------------------CCSEEESCGGG-CCTTEEEEECSCGGGHHHHHTTCSS---C---CSEEEECCCCCC
T ss_pred ---e--------------------eeEEEeCCHHH-hcCCCEEEEECCHHHHHHHHHHhCc---C---CCEEEEEeCCCC
Confidence 0 04667788887 8899999999999999999988765 4 789999999998
Q ss_pred cccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHHHhccCceEEEEeCChhhHHHHHHHhcCCCeEEEecCChhHHH
Q 022050 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDLVTHE 281 (303)
Q Consensus 202 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~ev~~g~~~~~~~~~~~~~~~~i~~lf~~~g~~~~~~~Di~g~e 281 (303)
+. ....+++.+.+.++ ....++.||+++.++..|.+..++.+..+ .+.++++|+..+++++.++|+.+++
T Consensus 116 ~~-----~~~~l~~~~~~~~~---~~~~~~~~P~~~~~~~~g~~~~~~~g~~~--~~~~~~ll~~~g~~~~~~~di~~~~ 185 (335)
T 1z82_A 116 IK-----TGKRVSEIVEEILG---CPYAVLSGPSHAEEVAKKLPTAVTLAGEN--SKELQKRISTEYFRVYTCEDVVGVE 185 (335)
T ss_dssp TT-----TCCCHHHHHHHHTC---CCEEEEESSCCHHHHHTTCCEEEEEEETT--HHHHHHHHCCSSEEEEEESCHHHHH
T ss_pred CC-----ccCcHHHHHHHHcC---CceEEEECCccHHHHhCCCceEEEEEehh--HHHHHHHhCCCCEEEEecCchHHHH
Confidence 75 34567777777664 24678999999999998886555444322 7899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcC
Q 022050 282 VMGGLKNVYAIGAGTIYFLVM 302 (303)
Q Consensus 282 ~~~~lkNv~Ai~~G~~~gl~~ 302 (303)
|+|++||++++++|+..|+.+
T Consensus 186 ~~k~l~N~~~~~~g~~~g~~~ 206 (335)
T 1z82_A 186 IAGALKNVIAIAAGILDGFGG 206 (335)
T ss_dssp HHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhHHHHHHHHHhcCCC
Confidence 999999999999999998754
No 6
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=99.94 E-value=2.6e-25 Score=210.99 Aligned_cols=202 Identities=24% Similarity=0.391 Sum_probs=162.5
Q ss_pred eEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhcCC
Q 022050 45 RIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGDR 124 (303)
Q Consensus 45 kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~ 124 (303)
||+|||+|+||+++|..|+++ | ++|++|+|++++++.+++.+ .++.++++.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~-G-----~~V~~~~r~~~~~~~l~~~~----------------~~~~~~~~~------- 67 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKK-C-----REVCVWHMNEEEVRLVNEKR----------------ENVLFLKGV------- 67 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTT-E-----EEEEEECSCHHHHHHHHHHT----------------BCTTTSTTC-------
T ss_pred eEEEECCCHHHHHHHHHHHhC-C-----CEEEEEECCHHHHHHHHHcC----------------ccccccccc-------
Confidence 999999999999999999998 8 99999999988776543221 111222211
Q ss_pred cccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHH----HHHHhhccCCCCEEEEeeccC
Q 022050 125 TLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEE----ISRYWKERITVPVIISLAKGV 200 (303)
Q Consensus 125 ~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~----l~~~l~~~~~~~iivs~~nGi 200 (303)
.+ ..++.+++++.++++++|+||++||++++++++++ +.++++++ +++|++++||+
T Consensus 68 ~~------------------~~~~~~~~~~~~~~~~aDvVilav~~~~~~~v~~~~~~gl~~~l~~~--~~ivv~~~~gi 127 (366)
T 1evy_A 68 QL------------------ASNITFTSDVEKAYNGAEIILFVIPTQFLRGFFEKSGGNLIAYAKEK--QVPVLVCTKGI 127 (366)
T ss_dssp BC------------------CTTEEEESCHHHHHTTCSSEEECCCHHHHHHHHHHHCHHHHHHHHHH--TCCEEECCCSC
T ss_pred cc------------------ccceeeeCCHHHHHcCCCEEEECCChHHHHHHHHHhHHHHHHhcCcc--CCEEEEECCcC
Confidence 11 02577888898888999999999999999999999 99888641 36899999999
Q ss_pred ccccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHHHhccCceEEEE-eCChhhHHHHHHHhcCC--CeEEEecCCh
Q 022050 201 EAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARI-CGAEKWRKPLAKFLRRP--HFTVWDNGDL 277 (303)
Q Consensus 201 ~~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~ev~~g~~~~~~~-~~~~~~~~~i~~lf~~~--g~~~~~~~Di 277 (303)
.+. ....+++.+.++++. ++..++.||+++.++..+.+..++. +.+.+..+.++.+|+.. +++++.++|+
T Consensus 128 ~~~-----~~~~~~~~l~~~~~~--~~~~v~~gp~~~~~~~~g~~~~~~~~~~~~~~~~~v~~ll~~~g~g~~~~~~~di 200 (366)
T 1evy_A 128 ERS-----TLKFPAEIIGEFLPS--PLLSVLAGPSFAIEVATGVFTCVSIASADINVARRLQRIMSTGDRSFVCWATTDT 200 (366)
T ss_dssp CTT-----TCCCHHHHHTTTSCG--GGEEEEESSCCHHHHHTTCCEEEEEECSSHHHHHHHHHHHSCTTSSEEEEEESCH
T ss_pred CCc-----cccCHHHHHHHHCCC--CcEEEEeCCChHHHHHhCCceEEEEecCCHHHHHHHHHHhcCCCCeEEEEEcCCc
Confidence 875 345667777776653 3467899999999998887765554 45567789999999999 9999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcC
Q 022050 278 VTHEVMGGLKNVYAIGAGTIYFLVM 302 (303)
Q Consensus 278 ~g~e~~~~lkNv~Ai~~G~~~gl~~ 302 (303)
.+++|++++||++++++|+++|+.+
T Consensus 201 ~~~~~~k~~~n~~~~~~~~~~~~~~ 225 (366)
T 1evy_A 201 VGCEVASAVKNVLAIGSGVANGLGM 225 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHhHHHHHHHHHhhccC
Confidence 9999999999999999999999865
No 7
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=99.92 E-value=1.3e-25 Score=210.03 Aligned_cols=192 Identities=18% Similarity=0.158 Sum_probs=149.7
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
.+|||+|||+|+||+++|..|+++ | ++|++| ++++++++++++++ +. ..++.
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~-G-----~~V~l~-~~~~~~~~i~~~g~----------------~~-~~~~~---- 69 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARA-G-----HEVILI-ARPQHVQAIEATGL----------------RL-ETQSF---- 69 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHT-T-----CEEEEE-CCHHHHHHHHHHCE----------------EE-ECSSC----
T ss_pred cCCcEEEECcCHHHHHHHHHHHHC-C-----CeEEEE-EcHhHHHHHHhCCe----------------EE-EcCCC----
Confidence 469999999999999999999999 8 999999 88877776543321 00 01110
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeeccCc
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nGi~ 201 (303)
.++ .++.+++++++ +.++|+||++||++++++++++|.+++++ +++|++++||++
T Consensus 70 ---~~~------------------~~~~~~~~~~~-~~~~D~vilavk~~~~~~~l~~l~~~l~~---~~~iv~~~nGi~ 124 (318)
T 3hwr_A 70 ---DEQ------------------VKVSASSDPSA-VQGADLVLFCVKSTDTQSAALAMKPALAK---SALVLSLQNGVE 124 (318)
T ss_dssp ---EEE------------------ECCEEESCGGG-GTTCSEEEECCCGGGHHHHHHHHTTTSCT---TCEEEEECSSSS
T ss_pred ---cEE------------------EeeeeeCCHHH-cCCCCEEEEEcccccHHHHHHHHHHhcCC---CCEEEEeCCCCC
Confidence 110 25667788764 68999999999999999999999999987 789999999998
Q ss_pred cccccccccCCHHHHHHhHhCCCC-----ccEEEEeCCCcHHHHhccCceEEEEeCChhhHHHHHHHhcCCCeEEEecCC
Q 022050 202 AELEAVPRIITPTQMINRATGVPI-----ENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGD 276 (303)
Q Consensus 202 ~~~~~~~~~~~~~~~i~~~l~~~~-----~~~~v~~GP~~a~ev~~g~~~~~~~~~~~~~~~~i~~lf~~~g~~~~~~~D 276 (303)
.. +.+.+.++.+. ...++++||+++.+++.|.+. ++. .+..+.++++|++.+|+++.++|
T Consensus 125 ~~-----------~~l~~~~~~~vl~g~~~~~a~~~gP~~~~~~~~g~~~---ig~-~~~~~~l~~~l~~~~~~~~~~~D 189 (318)
T 3hwr_A 125 NA-----------DTLRSLLEQEVAAAVVYVATEMAGPGHVRHHGRGELV---IEP-TSHGANLAAIFAAAGVPVETSDN 189 (318)
T ss_dssp HH-----------HHHHHHCCSEEEEEEEEEEEEEEETTEEEEEEEEEEE---ECC-CTTTHHHHHHHHHTTCCEEECSC
T ss_pred cH-----------HHHHHHcCCcEEEEEEEEeEEEcCCeEEEEcCCceEE---EcC-CHHHHHHHHHHHhCCCCcEechH
Confidence 75 34556664111 123578999999988877533 333 45678899999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhc
Q 022050 277 LVTHEVMGGLKNVYAIGAGTIYFLV 301 (303)
Q Consensus 277 i~g~e~~~~lkNv~Ai~~G~~~gl~ 301 (303)
+.+.+|.|+++|+...+.+.+.|+.
T Consensus 190 i~~~~w~Kl~~N~~~n~l~al~~~~ 214 (318)
T 3hwr_A 190 VRGALWAKLILNCAYNALSAITQLP 214 (318)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHhhhhHHHHHHCCC
Confidence 9999999999999999999988764
No 8
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=99.91 E-value=4.1e-23 Score=192.51 Aligned_cols=198 Identities=22% Similarity=0.319 Sum_probs=152.2
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEec--CCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRR--PGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r--~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
|||+|||+|+||+++|..|+++ | ++|++|+| ++++++.++.+++ +..+ +.
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~-g-----~~V~~~~r~~~~~~~~~~~~~~~----------------~~~~--g~---- 52 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDN-G-----NEVRIWGTEFDTEILKSISAGRE----------------HPRL--GV---- 52 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHH-C-----CEEEEECCGGGHHHHHHHHTTCC----------------BTTT--TB----
T ss_pred CEEEEECcCHHHHHHHHHHHhC-C-----CeEEEEEccCCHHHHHHHHHhCc----------------Cccc--Cc----
Confidence 7999999999999999999999 8 89999999 8776654332110 0000 00
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEec--CHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeecc
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVT--NLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~--d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nG 199 (303)
.+ .++.+++ ++.++++++|+||++||++.++++++++.+ +++ +++|++++||
T Consensus 53 ---~~-------------------~~~~~~~~~~~~~~~~~~D~vi~~v~~~~~~~v~~~i~~-l~~---~~~vv~~~ng 106 (335)
T 1txg_A 53 ---KL-------------------NGVEIFWPEQLEKCLENAEVVLLGVSTDGVLPVMSRILP-YLK---DQYIVLISKG 106 (335)
T ss_dssp ---CC-------------------CSEEEECGGGHHHHHTTCSEEEECSCGGGHHHHHHHHTT-TCC---SCEEEECCCS
T ss_pred ---cc-------------------cceEEecHHhHHHHHhcCCEEEEcCChHHHHHHHHHHhc-CCC---CCEEEEEcCc
Confidence 00 1356666 787788999999999999999999999999 887 7899999999
Q ss_pred C---ccccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHHHhccCceEEEEe-CChhhHHHHHHHhcCCCeEEEecC
Q 022050 200 V---EAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARIC-GAEKWRKPLAKFLRRPHFTVWDNG 275 (303)
Q Consensus 200 i---~~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~ev~~g~~~~~~~~-~~~~~~~~i~~lf~~~g~~~~~~~ 275 (303)
+ .+. +...+++.+.+.++.. ++..++.||+++.++..+.+..++++ .+.+..+.++++|+..+++++..+
T Consensus 107 ~~~~~~~-----~~~~l~~~~~~~~g~~-~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ll~~~g~~~~~~~ 180 (335)
T 1txg_A 107 LIDFDNS-----VLTVPEAVWRLKHDLR-ERTVAITGPAIAREVAKRMPTTVVFSSPSESSANKMKEIFETEYFGVEVTT 180 (335)
T ss_dssp EEEETTE-----EEEHHHHHHTTSTTCG-GGEEEEESSCCHHHHHTTCCEEEEEECSCHHHHHHHHHHHCBTTEEEEEES
T ss_pred CccCCCC-----cCccHHHHHHHhcCCC-CcEEEEECCCcHHHHHccCCcEEEEEeCCHHHHHHHHHHhCCCcEEEEecC
Confidence 9 443 1223344444433321 24678999999999888776544454 456678999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHhhhc
Q 022050 276 DLVTHEVMGGLKNVYAIGAGTIYFLV 301 (303)
Q Consensus 276 Di~g~e~~~~lkNv~Ai~~G~~~gl~ 301 (303)
|+.+.+|+|+++|++++++|++.++.
T Consensus 181 di~~~~~~k~~~N~~~~~~~~~~~~~ 206 (335)
T 1txg_A 181 DIIGTEITSALKNVYSIAIAWIRGYE 206 (335)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999988764
No 9
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=99.89 E-value=1.1e-23 Score=196.24 Aligned_cols=194 Identities=22% Similarity=0.188 Sum_probs=143.8
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhcC
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (303)
|||+|||+|+||+++|..|+++ | ++|++|+|++ .++++++++ ...... ++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-g-----~~V~~~~r~~--~~~i~~~g~-------------------~~~~~~---g~ 52 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS-G-----EDVHFLLRRD--YEAIAGNGL-------------------KVFSIN---GD 52 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT-S-----CCEEEECSTT--HHHHHHTCE-------------------EEEETT---CC
T ss_pred CEEEEECcCHHHHHHHHHHHHC-C-----CeEEEEEcCc--HHHHHhCCC-------------------EEEcCC---Ce
Confidence 7999999999999999999999 8 8999999986 344332221 111100 00
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeeccCccc
Q 022050 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEAE 203 (303)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nGi~~~ 203 (303)
..+ +++.++++.++ +.++|+||++||++++++++++|++++.+ +++|++++||++..
T Consensus 53 ~~~-------------------~~~~~~~~~~~-~~~~D~vilavk~~~~~~~l~~l~~~l~~---~~~iv~l~nGi~~~ 109 (312)
T 3hn2_A 53 FTL-------------------PHVKGYRAPEE-IGPMDLVLVGLKTFANSRYEELIRPLVEE---GTQILTLQNGLGNE 109 (312)
T ss_dssp EEE-------------------SCCCEESCHHH-HCCCSEEEECCCGGGGGGHHHHHGGGCCT---TCEEEECCSSSSHH
T ss_pred EEE-------------------eeceeecCHHH-cCCCCEEEEecCCCCcHHHHHHHHhhcCC---CCEEEEecCCCCcH
Confidence 001 13556777765 68999999999999999999999999987 78999999999864
Q ss_pred cccccccCCHHHHHHhHhCCCC------ccEEEEeCCCcHHHHhccCceEEEE-eCChhhHHHHHHHhcCCCeEEEecCC
Q 022050 204 LEAVPRIITPTQMINRATGVPI------ENILYLGGPNIASEIYNKEYANARI-CGAEKWRKPLAKFLRRPHFTVWDNGD 276 (303)
Q Consensus 204 ~~~~~~~~~~~~~i~~~l~~~~------~~~~v~~GP~~a~ev~~g~~~~~~~-~~~~~~~~~i~~lf~~~g~~~~~~~D 276 (303)
+.+.+.++... ...+.+.||+++.+.+.+...+... ..+.+..+.++++|++.+|+++.++|
T Consensus 110 -----------~~l~~~~~~~~v~~~~~~~~a~~~~p~~v~~~~~g~~~ig~~~~~~~~~~~~l~~~l~~~g~~~~~~~d 178 (312)
T 3hn2_A 110 -----------EALATLFGAERIIGGVAFLCSNRGEPGEVHHLGAGRIILGEFLPRDTGRIEELAAMFRQAGVDCRTTDD 178 (312)
T ss_dssp -----------HHHHHHTCGGGEEEEEEEEECCBCSSSEEEECEEEEEEEEESSCCCSHHHHHHHHHHHHTTCCEEECSC
T ss_pred -----------HHHHHHCCCCcEEEEEEEeeeEEcCCcEEEECCCCeEEEecCCCCccHHHHHHHHHHHhCCCCcEEChH
Confidence 45677775321 0123457899988766543211111 12345789999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhc
Q 022050 277 LVTHEVMGGLKNVYAIGAGTIYFLV 301 (303)
Q Consensus 277 i~g~e~~~~lkNv~Ai~~G~~~gl~ 301 (303)
+.+.+|.|+++|+...+.+.+.|+.
T Consensus 179 i~~~~w~Kl~~N~~~n~l~al~~~~ 203 (312)
T 3hn2_A 179 LKRARWEKLVWNIPFNGLCALLQQP 203 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHhHHHHHHHHCCC
Confidence 9999999999999988888887754
No 10
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=99.88 E-value=6.7e-23 Score=191.56 Aligned_cols=191 Identities=20% Similarity=0.270 Sum_probs=138.2
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhcC
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (303)
|||+|||+|+||+++|..|+++ | ++|++|+|++ .++++++++ ..... ..++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-g-----~~V~~~~r~~--~~~i~~~Gl-------------------~~~~~--~~g~ 53 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT-G-----HCVSVVSRSD--YETVKAKGI-------------------RIRSA--TLGD 53 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT-T-----CEEEEECSTT--HHHHHHHCE-------------------EEEET--TTCC
T ss_pred CEEEEECcCHHHHHHHHHHHhC-C-----CeEEEEeCCh--HHHHHhCCc-------------------EEeec--CCCc
Confidence 8999999999999999999999 8 8999999986 244432221 11100 0011
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeeccCccc
Q 022050 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEAE 203 (303)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nGi~~~ 203 (303)
..+ +++.++++++++.+++|+||+|||++++++++++|++++.+ +++|++++||++..
T Consensus 54 ~~~-------------------~~~~~~~~~~~~~~~~DlVilavK~~~~~~~l~~l~~~l~~---~t~Iv~~~nGi~~~ 111 (320)
T 3i83_A 54 YTF-------------------RPAAVVRSAAELETKPDCTLLCIKVVEGADRVGLLRDAVAP---DTGIVLISNGIDIE 111 (320)
T ss_dssp EEE-------------------CCSCEESCGGGCSSCCSEEEECCCCCTTCCHHHHHTTSCCT---TCEEEEECSSSSCS
T ss_pred EEE-------------------eeeeeECCHHHcCCCCCEEEEecCCCChHHHHHHHHhhcCC---CCEEEEeCCCCChH
Confidence 011 13556778877656899999999999999999999999987 78999999999875
Q ss_pred cccccccCCHHHHHHhHhCCCCccEEEEeCCCcH-------HHHhccCceEEEEe----CChhhHHHHHHHhcCCCeEEE
Q 022050 204 LEAVPRIITPTQMINRATGVPIENILYLGGPNIA-------SEIYNKEYANARIC----GAEKWRKPLAKFLRRPHFTVW 272 (303)
Q Consensus 204 ~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a-------~ev~~g~~~~~~~~----~~~~~~~~i~~lf~~~g~~~~ 272 (303)
+.+.+.++.. . +++||.+. .++..+.+..+.++ .+.+..+.++++|++.+|+++
T Consensus 112 -----------~~l~~~~~~~--~--vl~g~~~~~a~~~~pg~v~~~~~~~~~ig~~~~~~~~~~~~l~~~l~~~~~~~~ 176 (320)
T 3i83_A 112 -----------PEVAAAFPDN--E--VISGLAFIGVTRTAPGEIWHQAYGRLMLGNYPGGVSERVKTLAAAFEEAGIDGI 176 (320)
T ss_dssp -----------HHHHHHSTTS--C--EEEEEEEEEEEEEETTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHHHTTSCEE
T ss_pred -----------HHHHHHCCCC--c--EEEEEEEeceEEcCCCEEEECCCCEEEEecCCCCccHHHHHHHHHHHhCCCCce
Confidence 4677777642 1 34444443 22222223223332 234578999999999999999
Q ss_pred ecCChhHHHHHHHHHHH----HHHHHHHHhhh
Q 022050 273 DNGDLVTHEVMGGLKNV----YAIGAGTIYFL 300 (303)
Q Consensus 273 ~~~Di~g~e~~~~lkNv----~Ai~~G~~~gl 300 (303)
.++|+.+.+|.|+++|+ +++++|+..|.
T Consensus 177 ~~~di~~~~w~Kl~~N~~~N~ltal~~~~~g~ 208 (320)
T 3i83_A 177 ATENITTARWQKCVWNAAFNPLSVLSGGLDTL 208 (320)
T ss_dssp ECSCHHHHHHHHHHHHHHHHHHHHHTTSCCHH
T ss_pred ECHHHHHHHHHHHHHHHhhhHHHHHHCCCHHH
Confidence 99999999999999976 67777765553
No 11
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=99.85 E-value=8.5e-22 Score=185.17 Aligned_cols=206 Identities=17% Similarity=0.093 Sum_probs=146.5
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
+|||+|||+|+||+++|..|+++ | ++|++|+|+ +++++++++++ +. ..++.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~-g-----~~V~~~~r~-~~~~~~~~~g~----------------~~-~~~~~----- 53 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALA-G-----EAINVLARG-ATLQALQTAGL----------------RL-TEDGA----- 53 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHT-T-----CCEEEECCH-HHHHHHHHTCE----------------EE-EETTE-----
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-C-----CEEEEEECh-HHHHHHHHCCC----------------EE-ecCCC-----
Confidence 48999999999999999999999 8 899999996 45554332221 00 00100
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeeccCcc
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nGi~~ 202 (303)
.++ .++.+++++++ +.++|+||+|||++++++++++|.+++++ +++|++++||++.
T Consensus 54 --~~~------------------~~~~~~~~~~~-~~~~D~Vilavk~~~~~~~~~~l~~~l~~---~~~iv~~~nGi~~ 109 (335)
T 3ghy_A 54 --THT------------------LPVRATHDAAA-LGEQDVVIVAVKAPALESVAAGIAPLIGP---GTCVVVAMNGVPW 109 (335)
T ss_dssp --EEE------------------ECCEEESCHHH-HCCCSEEEECCCHHHHHHHHGGGSSSCCT---TCEEEECCSSSCT
T ss_pred --eEE------------------EeeeEECCHHH-cCCCCEEEEeCCchhHHHHHHHHHhhCCC---CCEEEEECCCCcc
Confidence 010 14667788876 58999999999999999999999998887 7899999999852
Q ss_pred ccc-c--ccccC-----CHHHHHHhHhCCCC------ccEEEEeCCCcHHHHhccCceEEEE-eCChhhHHHHHHHhcCC
Q 022050 203 ELE-A--VPRII-----TPTQMINRATGVPI------ENILYLGGPNIASEIYNKEYANARI-CGAEKWRKPLAKFLRRP 267 (303)
Q Consensus 203 ~~~-~--~~~~~-----~~~~~i~~~l~~~~------~~~~v~~GP~~a~ev~~g~~~~~~~-~~~~~~~~~i~~lf~~~ 267 (303)
... . ..+.. ...+.+.+.++... ...+.+.+|+++.+...+...+... +.+.+..+.++++|++.
T Consensus 110 ~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~v~~gv~~~~a~~~~pg~v~~~~~g~~~iG~~~~~~~~~~~~l~~~l~~~ 189 (335)
T 3ghy_A 110 WFFDRPGPLQGQRLQAVDPHGRIAQAIPTRHVLGCVVHLTCATVSPGHIRHGNGRRLILGEPAGGASPRLASIAALFGRA 189 (335)
T ss_dssp TTTCSSSTTTTCCCTTTCTTSHHHHHSCGGGEEEEEECCCEEESSTTEEEECSCCEEEEECTTCSCCHHHHHHHHHHHHT
T ss_pred ccccccccccccccccCCcHHHHHHhcCcccEEEEEEEEEEEEcCCcEEEECCCCeEEEecCCCCcCHHHHHHHHHHHhC
Confidence 100 0 00111 12346777775321 0115678999988766553211111 12345789999999999
Q ss_pred CeEEEecCChhHHHHHHHH----HHHHHHHHHHHhhhc
Q 022050 268 HFTVWDNGDLVTHEVMGGL----KNVYAIGAGTIYFLV 301 (303)
Q Consensus 268 g~~~~~~~Di~g~e~~~~l----kNv~Ai~~G~~~gl~ 301 (303)
+|+++.++|+.+..|.+.+ +|++++++|+..|..
T Consensus 190 g~~~~~~~di~~~~w~Kl~~na~~N~l~al~~~~~g~~ 227 (335)
T 3ghy_A 190 GLQAECSEAIQRDIWFKLWGNMTMNPVSVLTGATCDRI 227 (335)
T ss_dssp TCEEEECSCHHHHHHHHHHTTTTHHHHHHHHCCCHHHH
T ss_pred CCCcEeCchHHHHHHHHHHHHhhhhHHHHHhCCChHHH
Confidence 9999999999999988855 899999999888753
No 12
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=99.84 E-value=7.2e-21 Score=175.76 Aligned_cols=178 Identities=14% Similarity=0.126 Sum_probs=128.2
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
+|||+|||+|+||+++|..|+++ | ++|++|+|+++.++.. ...+
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~-g-----~~V~~~~r~~~~~~~~------------------------~~~g------ 45 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQS-L-----PHTTLIGRHAKTITYY------------------------TVPH------ 45 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHH-C-----TTCEEEESSCEEEEEE------------------------SSTT------
T ss_pred CcEEEEECCCHHHHHHHHHHHHC-C-----CeEEEEEeccCcEEEE------------------------ecCC------
Confidence 38999999999999999999999 8 8999999997654310 0000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHh-cCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeeccCc
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAV-WDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~-~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nGi~ 201 (303)
.. +..++.+..+++ +++|+||+|||+++++++++++++++++ +++|++++||++
T Consensus 46 --~~--------------------~~~~~~~~~~~~~~~~D~vilavk~~~~~~~l~~l~~~l~~---~~~iv~~~nGi~ 100 (294)
T 3g17_A 46 --AP--------------------AQDIVVKGYEDVTNTFDVIIIAVKTHQLDAVIPHLTYLAHE---DTLIILAQNGYG 100 (294)
T ss_dssp --SC--------------------CEEEEEEEGGGCCSCEEEEEECSCGGGHHHHGGGHHHHEEE---EEEEEECCSSCC
T ss_pred --ee--------------------ccceecCchHhcCCCCCEEEEeCCccCHHHHHHHHHHhhCC---CCEEEEeccCcc
Confidence 00 122333444444 7899999999999999999999999987 789999999999
Q ss_pred cccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHHHhccCceEEEEeCChhhHHHHHHHhcCCCeEEEecCChhHHH
Q 022050 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDLVTHE 281 (303)
Q Consensus 202 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~ev~~g~~~~~~~~~~~~~~~~i~~lf~~~g~~~~~~~Di~g~e 281 (303)
..+. .+. .+.++......+.+.||+++. . + +..+.. .+.+..+.++++|++.+|+++.++|+.+.+
T Consensus 101 ~~~~------~~~---~~v~~g~~~~~a~~~~pg~v~-~--~-~~~~~~-~~~~~~~~l~~~l~~~~~~~~~~~di~~~~ 166 (294)
T 3g17_A 101 QLEH------IPF---KNVCQAVVYISGQKKGDVVTH-F--R-DYQLRI-QDNALTRQFRDLVQDSQIDIVLEANIQQAI 166 (294)
T ss_dssp CGGG------CCC---SCEEECEEEEEEEEETTEEEE-E--E-EEEEEE-ECSHHHHHHHHHTTTSSCEEEEESSHHHHH
T ss_pred cHhh------CCC---CcEEEEEEEEEEEEcCCCEEE-E--C-CCEEec-CccHHHHHHHHHHHhCCCceEEChHHHHHH
Confidence 8621 000 011110011235678999873 2 2 222222 345678999999999999999999999999
Q ss_pred HHHHHHHH-HHHHHHH
Q 022050 282 VMGGLKNV-YAIGAGT 296 (303)
Q Consensus 282 ~~~~lkNv-~Ai~~G~ 296 (303)
|.|+++|+ ++ .+++
T Consensus 167 w~Kl~~N~~in-l~al 181 (294)
T 3g17_A 167 WYKLLVNLGIN-SITA 181 (294)
T ss_dssp HHHHHHHHHHH-HHHH
T ss_pred HHHHHHHHHHH-HHHH
Confidence 99999999 56 4444
No 13
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=99.84 E-value=1.5e-20 Score=173.00 Aligned_cols=195 Identities=16% Similarity=0.166 Sum_probs=140.5
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
+|||+|||+|+||+++|..|+++ | ++|++|+|++++++.++++++ ......
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~-g-----~~V~~~~r~~~~~~~~~~~g~-------------------~~~~~~---- 53 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQG-G-----NDVTLIDQWPAHIEAIRKNGL-------------------IADFNG---- 53 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHHHHHHHHCE-------------------EEEETT----
T ss_pred CCeEEEECcCHHHHHHHHHHHhC-C-----CcEEEEECCHHHHHHHHhCCE-------------------EEEeCC----
Confidence 58999999999999999999998 8 899999999887765432211 010000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHH---hcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeecc
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEA---VWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a---~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nG 199 (303)
+ .+. .++.++++ .++ ++++|+||++||++.++++++++.+++++ +++|++++||
T Consensus 54 ~-~~~------------------~~~~~~~~-~~~~~~~~~~d~vi~~v~~~~~~~v~~~l~~~l~~---~~~iv~~~~g 110 (316)
T 2ew2_A 54 E-EVV------------------ANLPIFSP-EEIDHQNEQVDLIIALTKAQQLDAMFKAIQPMITE---KTYVLCLLNG 110 (316)
T ss_dssp E-EEE------------------ECCCEECG-GGCCTTSCCCSEEEECSCHHHHHHHHHHHGGGCCT---TCEEEECCSS
T ss_pred C-eeE------------------ecceeecc-hhhcccCCCCCEEEEEeccccHHHHHHHHHHhcCC---CCEEEEecCC
Confidence 0 000 12334332 233 34899999999999999999999998887 7899999999
Q ss_pred CccccccccccCCHHHHHHhHhCCCC------ccEEEEeCCCcHHHHhccCceEEEE-eCChhhHHHHHHHhcCCCeEEE
Q 022050 200 VEAELEAVPRIITPTQMINRATGVPI------ENILYLGGPNIASEIYNKEYANARI-CGAEKWRKPLAKFLRRPHFTVW 272 (303)
Q Consensus 200 i~~~~~~~~~~~~~~~~i~~~l~~~~------~~~~v~~GP~~a~ev~~g~~~~~~~-~~~~~~~~~i~~lf~~~g~~~~ 272 (303)
+... +.+.+.++... ...+.+.||+++.+...|.+..... +.+.+..+.++++|+..|++++
T Consensus 111 ~~~~-----------~~l~~~~~~~~vi~g~~~~~~~~~~p~~~~~~~~g~~~i~~~~~~~~~~~~~~~~ll~~~g~~~~ 179 (316)
T 2ew2_A 111 LGHE-----------DVLEKYVPKENILVGITMWTAGLEGPGRVKLLGDGEIELENIDPSGKKFALEVVDVFQKAGLNPS 179 (316)
T ss_dssp SCTH-----------HHHTTTSCGGGEEEEEECCCCEEEETTEEEECSCCCEEEEESSGGGHHHHHHHHHHHHHTTCCEE
T ss_pred CCcH-----------HHHHHHcCCccEEEEEeeeeeEEcCCCEEEEecCCcEEEeecCCCccHHHHHHHHHHHhCCCCcE
Confidence 8753 33555554210 0012478999887776666543332 2345678999999999999999
Q ss_pred ecCChhHHHHHHHHHHHHHHHHHHHhhh
Q 022050 273 DNGDLVTHEVMGGLKNVYAIGAGTIYFL 300 (303)
Q Consensus 273 ~~~Di~g~e~~~~lkNv~Ai~~G~~~gl 300 (303)
..+|+.+.+|.|+++|++..+.+.+.|.
T Consensus 180 ~~~d~~~~~~~Kl~~N~~~~~~~al~~~ 207 (316)
T 2ew2_A 180 YSSNVRYSIWRKACVNGTLNGLCTILDC 207 (316)
T ss_dssp ECTTHHHHHHHHHHHHTTHHHHHHHHTC
T ss_pred EchhHHHHHHHHHHHhhhHHHHHHHhCC
Confidence 9999999999999999988777666654
No 14
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=99.80 E-value=1.2e-19 Score=168.89 Aligned_cols=190 Identities=14% Similarity=0.059 Sum_probs=133.7
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
+|||+|||+|+||+++|..|+ + | ++|++|+|+++++++++++++ ..... +
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~-g-----~~V~~~~r~~~~~~~l~~~G~-------------------~~~~~----~ 51 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-L-Y-----HDVTVVTRRQEQAAAIQSEGI-------------------RLYKG----G 51 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T-T-----SEEEEECSCHHHHHHHHHHCE-------------------EEEET----T
T ss_pred CCEEEEECCCHHHHHHHHHHh-c-C-----CceEEEECCHHHHHHHHhCCc-------------------eEecC----C
Confidence 489999999999999999999 8 8 899999999877765443221 11100 0
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeeccCcc
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nGi~~ 202 (303)
. .. + ..+..+. ++..++|+||+|||++++++++++++++ .+ ++ |++++||++.
T Consensus 52 ~-~~-~-----------------~~~~~~~---~~~~~~D~vilavK~~~~~~~l~~l~~~-~~---~~-ivs~~nGi~~ 104 (307)
T 3ego_A 52 E-EF-R-----------------ADCSADT---SINSDFDLLVVTVKQHQLQSVFSSLERI-GK---TN-ILFLQNGMGH 104 (307)
T ss_dssp E-EE-E-----------------ECCEEES---SCCSCCSEEEECCCGGGHHHHHHHTTSS-CC---CE-EEECCSSSHH
T ss_pred C-ee-c-----------------ccccccc---cccCCCCEEEEEeCHHHHHHHHHHhhcC-CC---Ce-EEEecCCccH
Confidence 0 00 0 0122221 2457899999999999999999999875 44 56 9999999987
Q ss_pred ccccccccCCHHHHHHhHhCCCC------ccEEEEeCCCcHHHHhccCceEEEEeCChhhHHHHHHHhcCCCeEEEecCC
Q 022050 203 ELEAVPRIITPTQMINRATGVPI------ENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGD 276 (303)
Q Consensus 203 ~~~~~~~~~~~~~~i~~~l~~~~------~~~~v~~GP~~a~ev~~g~~~~~~~~~~~~~~~~i~~lf~~~g~~~~~~~D 276 (303)
. +.+.+++|... ...+.+.+|++..+.+.|...+.......+..+.+.++|...++++..++|
T Consensus 105 ~-----------e~l~~~~~~~~vl~g~~~~~a~~~~pg~v~~~~~g~~~iG~~~~~~~~~~~l~~~l~~ag~~~~~~~d 173 (307)
T 3ego_A 105 I-----------HDLKDWHVGHSIYVGIVEHGAVRKSDTAVDHTGLGAIKWSAFDDAEPDRLNILFQHNHSDFPIYYETD 173 (307)
T ss_dssp H-----------HHHHTCCCSCEEEEEEECCEEEECSSSEEEEEECCCEEEEECTTCCGGGGTTTTSSCCTTSCEEECSC
T ss_pred H-----------HHHHHhCCCCcEEEEEEeeceEECCCCEEEEeeeeeEEEEeCCCCcHHHHHHHHHhhhCCCCcEechh
Confidence 5 45777776431 112456788887766655432222222245667788899999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhh
Q 022050 277 LVTHEVMGGLKNVYAIGAGTIYFL 300 (303)
Q Consensus 277 i~g~e~~~~lkNv~Ai~~G~~~gl 300 (303)
+.+..|.|.+.|+.--..+.+.+.
T Consensus 174 i~~~~W~Kl~~N~~~N~ltal~~~ 197 (307)
T 3ego_A 174 WYRLLTGKLIVNACINPLTALLQV 197 (307)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhhhhhHHHHHhcC
Confidence 999999999999855555544443
No 15
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=99.79 E-value=2.4e-18 Score=151.62 Aligned_cols=173 Identities=13% Similarity=0.137 Sum_probs=130.6
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
..|||+|||+|+||+++|..|+++ | ++|++|+|+++
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~-g-----~~V~~~~~~~~-------------------------------------- 53 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIA-G-----HEVTYYGSKDQ-------------------------------------- 53 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECTTCC--------------------------------------
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-C-----CEEEEEcCCHH--------------------------------------
Confidence 358999999999999999999998 8 89999987631
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeeccCc
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nGi~ 201 (303)
++++||+||++||++.++++++++.++++ +++++++++|++
T Consensus 54 -----------------------------------~~~~aD~vi~av~~~~~~~v~~~l~~~~~----~~~vi~~~~g~~ 94 (209)
T 2raf_A 54 -----------------------------------ATTLGEIVIMAVPYPALAALAKQYATQLK----GKIVVDITNPLN 94 (209)
T ss_dssp -----------------------------------CSSCCSEEEECSCHHHHHHHHHHTHHHHT----TSEEEECCCCBC
T ss_pred -----------------------------------HhccCCEEEEcCCcHHHHHHHHHHHHhcC----CCEEEEECCCCC
Confidence 23578999999999999999999988775 479999999997
Q ss_pred -ccc--ccccccCCHHHHHHhHhCCCCccEE----EEeCCCcHHHHhcc-CceEEEE-eCChhhHHHHHHHhcCCCeEEE
Q 022050 202 -AEL--EAVPRIITPTQMINRATGVPIENIL----YLGGPNIASEIYNK-EYANARI-CGAEKWRKPLAKFLRRPHFTVW 272 (303)
Q Consensus 202 -~~~--~~~~~~~~~~~~i~~~l~~~~~~~~----v~~GP~~a~ev~~g-~~~~~~~-~~~~~~~~~i~~lf~~~g~~~~ 272 (303)
.+. ...++...+.+.+++.++. .++. .+.+|+++.+...+ .+..+.. +.+.+..+.++++|+..|++++
T Consensus 95 ~~~~~~l~~~~~~~~~~~l~~~l~~--~~vv~~~~~~~~p~~~~~~~~g~~~~~~~~~g~~~~~~~~v~~ll~~~G~~~~ 172 (209)
T 2raf_A 95 FDTWDDLVVPADSSAAQELQQQLPD--SQVLKAFNTTFAATLQSGQVNGKEPTTVLVAGNDDSAKQRFTRALADSPLEVK 172 (209)
T ss_dssp TTTSSSBSSCTTCCHHHHHHHHCTT--SEEEECSTTSCHHHHHHSEETTTEECEEEEEESCHHHHHHHHHHTTTSSCEEE
T ss_pred ccccccccCCCCCcHHHHHHHHCCC--CcEEEeeecccHhhccccccCCCCCceeEEcCCCHHHHHHHHHHHHHcCCceE
Confidence 320 0001233456778887752 2221 12388888766555 2333333 3455778999999999999998
Q ss_pred ecCChhHHHHHHHHHHHHHHHHHHHhhhcC
Q 022050 273 DNGDLVTHEVMGGLKNVYAIGAGTIYFLVM 302 (303)
Q Consensus 273 ~~~Di~g~e~~~~lkNv~Ai~~G~~~gl~~ 302 (303)
...| ++.+..+||++++++|+++++++
T Consensus 173 ~~~~---i~~a~~~K~i~~l~~~~~~~~g~ 199 (209)
T 2raf_A 173 DAGK---LKRARELEAMGFMQMTLAASEQI 199 (209)
T ss_dssp EEES---GGGHHHHHHHHHHHHHHHHTTSS
T ss_pred eCCC---HhHHHHhcchHHHHHHHHHHcCC
Confidence 8888 48899999999999999987765
No 16
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=99.78 E-value=2.5e-18 Score=168.05 Aligned_cols=196 Identities=18% Similarity=0.117 Sum_probs=146.9
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
..+|+|||+|+||..+|..|+++ | ++|++||+++++++.++.. +++.|++++...
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~-G-----~~V~~~D~~~~kv~~l~~g-----------------~~~~~epgl~~~-- 62 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDF-G-----HEVVCVDKDARKIELLHQN-----------------VMPIYEPGLDAL-- 62 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCSTTHHHHTTT-----------------CCSSCCTTHHHH--
T ss_pred ceEEEEEcCCHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHHHhcC-----------------CCCccCCCHHHH--
Confidence 46899999999999999999999 9 9999999999988875532 255666654211
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-----------hHHHHHHHHHHHhhccCCCC
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-----------ETKEVFEEISRYWKERITVP 191 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~-----------~~~~vl~~l~~~l~~~~~~~ 191 (303)
+.+... ..++++++|+++++++||+||+|||.. +++++++.|.+++++ ++
T Consensus 63 ---------~~~~~~-------~g~l~~ttd~~ea~~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~---g~ 123 (446)
T 4a7p_A 63 ---------VASNVK-------AGRLSFTTDLAEGVKDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTK---PS 123 (446)
T ss_dssp ---------HHHHHH-------TTCEEEESCHHHHHTTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCS---CC
T ss_pred ---------HHhhcc-------cCCEEEECCHHHHHhcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCC---CC
Confidence 100000 025889999999999999999998665 589999999999887 77
Q ss_pred EEEEeeccCccccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHHHhc----cCceEEEEeC-ChhhHHHHHHHhcC
Q 022050 192 VIISLAKGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYN----KEYANARICG-AEKWRKPLAKFLRR 266 (303)
Q Consensus 192 iivs~~nGi~~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~ev~~----g~~~~~~~~~-~~~~~~~i~~lf~~ 266 (303)
+||.. +++.+. +...+.+.+.+..+. ..+.+.++|+++.+... +.+..++.+. +.+..+.++.+|+.
T Consensus 124 iVV~~-STv~pg-----tt~~l~~~l~e~~~~--~d~~v~~~Pe~a~eG~a~~d~~~p~~ivvG~~~~~~~~~~~~ly~~ 195 (446)
T 4a7p_A 124 VIVTK-STVPVG-----TGDEVERIIAEVAPN--SGAKVVSNPEFLREGAAIEDFKRPDRVVVGTEDEFARQVMREIYRP 195 (446)
T ss_dssp EEEEC-SCCCTT-----HHHHHHHHHHHHSTT--SCCEEEECCCCCCTTSHHHHHHSCSCEEEECSCHHHHHHHHHHHCS
T ss_pred EEEEe-CCCCch-----HHHHHHHHHHHhCCC--CCceEEeCcccccccchhhhccCCCEEEEeCCcHHHHHHHHHHHHH
Confidence 77764 477776 345556666665432 34678999999987653 4555555554 46778999999975
Q ss_pred CCeE----EEecCChhHHHHHHHHHHHHH
Q 022050 267 PHFT----VWDNGDLVTHEVMGGLKNVYA 291 (303)
Q Consensus 267 ~g~~----~~~~~Di~g~e~~~~lkNv~A 291 (303)
.++ ++...|+.+.|++|...|.+.
T Consensus 196 -~~~~~~~~~~~~d~~~aE~~Kl~~N~~~ 223 (446)
T 4a7p_A 196 -LSLNQSAPVLFTGRRTSELIKYAANAFL 223 (446)
T ss_dssp -CC-----CEEEECHHHHHHHHHHHHHHH
T ss_pred -HhcCCCeEEEeCCHHHHHHHHHHHHHHH
Confidence 443 477889999999999999875
No 17
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.78 E-value=6.2e-19 Score=160.60 Aligned_cols=185 Identities=11% Similarity=0.070 Sum_probs=135.1
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhcC
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (303)
|||+|||+|+||+++|..|++. | ++|++|+|++++++.+.. .+.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~-g-----~~V~~~~~~~~~~~~~~~------------------------~g~------ 44 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRR-G-----HYLIGVSRQQSTCEKAVE------------------------RQL------ 44 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHHHHHHH------------------------TTS------
T ss_pred CEEEEEcCcHHHHHHHHHHHHC-C-----CEEEEEECCHHHHHHHHh------------------------CCC------
Confidence 7999999999999999999998 8 899999999876543210 000
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeeccCccc
Q 022050 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEAE 203 (303)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nGi~~~ 203 (303)
...++++++++ +++|+||++||++.+.++++++.+++++ +++|+++ .++...
T Consensus 45 -----------------------~~~~~~~~~~~-~~~D~vi~av~~~~~~~~~~~l~~~~~~---~~~vv~~-~~~~~~ 96 (279)
T 2f1k_A 45 -----------------------VDEAGQDLSLL-QTAKIIFLCTPIQLILPTLEKLIPHLSP---TAIVTDV-ASVKTA 96 (279)
T ss_dssp -----------------------CSEEESCGGGG-TTCSEEEECSCHHHHHHHHHHHGGGSCT---TCEEEEC-CSCCHH
T ss_pred -----------------------CccccCCHHHh-CCCCEEEEECCHHHHHHHHHHHHhhCCC---CCEEEEC-CCCcHH
Confidence 11345677777 8999999999999999999999988877 7888876 333322
Q ss_pred cccccccCCHHHHHHhHhCC--CCccEE--EEeCCCcHH-HHhccCceEEEEe--CChhhHHHHHHHhcCCCeEEEecCC
Q 022050 204 LEAVPRIITPTQMINRATGV--PIENIL--YLGGPNIAS-EIYNKEYANARIC--GAEKWRKPLAKFLRRPHFTVWDNGD 276 (303)
Q Consensus 204 ~~~~~~~~~~~~~i~~~l~~--~~~~~~--v~~GP~~a~-ev~~g~~~~~~~~--~~~~~~~~i~~lf~~~g~~~~~~~D 276 (303)
. . +.+.+.+.. +.+|+. ...||+++. ++..+.++.++.. .+.+..+.++++|+..|++++..+|
T Consensus 97 ~--------~-~~~~~~~~~~~~~~p~~g~~~~gp~~a~~~~~~g~~~~~~~~~~~~~~~~~~v~~l~~~~g~~~~~~~~ 167 (279)
T 2f1k_A 97 I--------A-EPASQLWSGFIGGHPMAGTAAQGIDGAEENLFVNAPYVLTPTEYTDPEQLACLRSVLEPLGVKIYLCTP 167 (279)
T ss_dssp H--------H-HHHHHHSTTCEEEEECCCCSCSSGGGCCTTTTTTCEEEEEECTTCCHHHHHHHHHHHGGGTCEEEECCH
T ss_pred H--------H-HHHHHHhCCEeecCcccCCccCCHHHHhHHHhCCCcEEEecCCCCCHHHHHHHHHHHHHcCCEEEEcCH
Confidence 0 1 122233221 112222 345677765 4556655544442 3566789999999999999999999
Q ss_pred hhHHHHHHHHHHH-HHHHHHHHhhhc
Q 022050 277 LVTHEVMGGLKNV-YAIGAGTIYFLV 301 (303)
Q Consensus 277 i~g~e~~~~lkNv-~Ai~~G~~~gl~ 301 (303)
..+.+|+++++|. .+++.+++++++
T Consensus 168 ~~~~~~~~~~~~~p~~i~~al~~~~~ 193 (279)
T 2f1k_A 168 ADHDQAVAWISHLPVMVSAALIQACA 193 (279)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 9999999999996 899999998875
No 18
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=99.77 E-value=1.3e-18 Score=160.48 Aligned_cols=199 Identities=16% Similarity=0.129 Sum_probs=138.3
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCC-eeEEEEecCCchhhhhhh-hhHHHHHhhhhhHHHHhhhhcccchhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDK-VLIRIWRRPGRSVDRATA-EHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~-~~V~l~~r~~~~~~~~~~-~~l~~~i~~~~~~~~~~~~~~~~l~~~~~ 119 (303)
.+|||+|||+|+||+++|..|+++ +....+ ++|++|+| +++++++++ .++ ......
T Consensus 7 ~~m~I~iiG~G~mG~~~a~~L~~~-~~~~~g~~~V~~~~r-~~~~~~l~~~~g~-------------------~~~~~~- 64 (317)
T 2qyt_A 7 QPIKIAVFGLGGVGGYYGAMLALR-AAATDGLLEVSWIAR-GAHLEAIRAAGGL-------------------RVVTPS- 64 (317)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHH-HHHTTSSEEEEEECC-HHHHHHHHHHTSE-------------------EEECSS-
T ss_pred CCCEEEEECcCHHHHHHHHHHHhC-ccccCCCCCEEEEEc-HHHHHHHHhcCCe-------------------EEEeCC-
Confidence 348999999999999999999875 111102 68999999 666655432 110 111000
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeecc
Q 022050 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (303)
Q Consensus 120 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nG 199 (303)
++ .. . .++.++++.+ +++++|+||++||++.++++++++.+++.+ +++||+++||
T Consensus 65 --~~-~~------------~------~~~~~~~~~~-~~~~~D~vil~vk~~~~~~v~~~i~~~l~~---~~~iv~~~nG 119 (317)
T 2qyt_A 65 --RD-FL------------A------RPTCVTDNPA-EVGTVDYILFCTKDYDMERGVAEIRPMIGQ---NTKILPLLNG 119 (317)
T ss_dssp --CE-EE------------E------CCSEEESCHH-HHCCEEEEEECCSSSCHHHHHHHHGGGEEE---EEEEEECSCS
T ss_pred --CC-eE------------E------ecceEecCcc-ccCCCCEEEEecCcccHHHHHHHHHhhcCC---CCEEEEccCC
Confidence 00 00 0 1356666664 468999999999999999999999998887 6889999999
Q ss_pred CccccccccccCCHHHHHHhHhCCCC------ccEEEEeCCCcHHHHhccCceEEEEeC-----ChhhHHHHHHHhcCCC
Q 022050 200 VEAELEAVPRIITPTQMINRATGVPI------ENILYLGGPNIASEIYNKEYANARICG-----AEKWRKPLAKFLRRPH 268 (303)
Q Consensus 200 i~~~~~~~~~~~~~~~~i~~~l~~~~------~~~~v~~GP~~a~ev~~g~~~~~~~~~-----~~~~~~~i~~lf~~~g 268 (303)
+... +.+.+.++... ...+.+.+|+++.+...+.. .+++. +.+.. .++++|+..+
T Consensus 120 ~~~~-----------~~l~~~l~~~~v~~g~~~~~a~~~~pg~~~~~~~g~~--~~ig~~~~~~~~~~~-~~~~ll~~~g 185 (317)
T 2qyt_A 120 ADIA-----------ERMRTYLPDTVVWKGCVYISARKSAPGLITLEADREL--FYFGSGLPEQTDDEV-RLAELLTAAG 185 (317)
T ss_dssp SSHH-----------HHHTTTSCTTTBCEEEEEEEEEEEETTEEEEEEEEEE--EEEECCSSSCCHHHH-HHHHHHHHTT
T ss_pred CCcH-----------HHHHHHCCCCcEEEEEEEEEEEEcCCCEEEEcCCCce--EEEcCCCCCCcCHHH-HHHHHHHHCC
Confidence 8753 44666665321 11245677877655444422 21321 23455 8899999999
Q ss_pred eEEEecCChhHHHHHHHHHHHHHHHHHHHhhhc
Q 022050 269 FTVWDNGDLVTHEVMGGLKNVYAIGAGTIYFLV 301 (303)
Q Consensus 269 ~~~~~~~Di~g~e~~~~lkNv~Ai~~G~~~gl~ 301 (303)
++++..+|+.+.+|.|+++|+...+.+.+.|..
T Consensus 186 ~~~~~~~di~~~~~~Kl~~N~~~~~~~al~g~~ 218 (317)
T 2qyt_A 186 IRAYNPTDIDWYIMKKFMMISVTATATAYFDKP 218 (317)
T ss_dssp CCEECCSCHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred CCCEEchHHHHHHHHHHHHHHhhHHHHHHHCCC
Confidence 999999999999999999999988877776653
No 19
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=99.77 E-value=2.7e-18 Score=169.23 Aligned_cols=199 Identities=14% Similarity=0.077 Sum_probs=143.2
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
..|||+|||+|+||+.+|..|+++ | ++|++||+++++++.+++.+ ++.+.+++..
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~-G-----~~V~~~d~~~~~v~~l~~~~-----------------~~i~e~gl~~-- 61 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADI-G-----HDVFCLDVDQAKIDILNNGG-----------------VPIHEPGLKE-- 61 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHHHHHHTTC-----------------CSSCCTTHHH--
T ss_pred CCceEEEECcCHHHHHHHHHHHhC-C-----CEEEEEECCHHHHHHHHCCC-----------------CCcCCCCHHH--
Confidence 459999999999999999999999 9 99999999999887755321 2333333210
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCc----------hhHHHHHHHHHHHhhccCCCC
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS----------TETKEVFEEISRYWKERITVP 191 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~----------~~~~~vl~~l~~~l~~~~~~~ 191 (303)
.+.+... ..++.+++|+++++++||+||+|||. .++++++++|.+++++ ++
T Consensus 62 ---------~l~~~~~-------~~~l~~ttd~~~a~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~---~~ 122 (478)
T 2y0c_A 62 ---------VIARNRS-------AGRLRFSTDIEAAVAHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTG---FK 122 (478)
T ss_dssp ---------HHHHHHH-------TTCEEEECCHHHHHHHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCS---CE
T ss_pred ---------HHHHhcc-------cCCEEEECCHHHHhhcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCC---CC
Confidence 0000000 02588999998888999999999998 8999999999999987 67
Q ss_pred EEEEeeccCccccccccccCCHHHHHHhHhCCCC--ccEEEEeCCCcHHHHhc----cCceEEEEe-CCh----hhHHHH
Q 022050 192 VIISLAKGVEAELEAVPRIITPTQMINRATGVPI--ENILYLGGPNIASEIYN----KEYANARIC-GAE----KWRKPL 260 (303)
Q Consensus 192 iivs~~nGi~~~~~~~~~~~~~~~~i~~~l~~~~--~~~~v~~GP~~a~ev~~----g~~~~~~~~-~~~----~~~~~i 260 (303)
+|+.. +++.+. +...+.+.+.+.++.+. ..+.+.++|.++.+... +.+..++.+ .+. +..+.+
T Consensus 123 iVV~~-STv~~g-----t~~~l~~~l~~~~~~g~~~~~~~v~~~Pe~~~eG~~~~~~~~p~~iviG~~~~~~~~~~~~~~ 196 (478)
T 2y0c_A 123 VIVDK-STVPVG-----TAERVRAAVAEELAKRGGDQMFSVVSNPEFLKEGAAVDDFTRPDRIVIGCDDDVPGERARELM 196 (478)
T ss_dssp EEEEC-SCCCTT-----HHHHHHHHHHHHHHHTTCCCCEEEEECCCCCCTTCHHHHHHSCSCEEEECCSSHHHHHHHHHH
T ss_pred EEEEe-CCcCCC-----chHHHHHHHHHHhcCCCCCccEEEEEChhhhcccceeeccCCCCEEEEEECCCcccHHHHHHH
Confidence 76654 477665 23335555655432111 23578999999876543 444445554 334 567889
Q ss_pred HHHhcCCCe---EEEecCChhHHHHHHHHHHHHH
Q 022050 261 AKFLRRPHF---TVWDNGDLVTHEVMGGLKNVYA 291 (303)
Q Consensus 261 ~~lf~~~g~---~~~~~~Di~g~e~~~~lkNv~A 291 (303)
+++|+. .+ .++...|+.+.||+|.+-|.+.
T Consensus 197 ~~l~~~-~~~~~~~~~~~di~~ae~~Kl~~N~~~ 229 (478)
T 2y0c_A 197 KKLYAP-FNRNHERTLYMDVRSAEFTKYAANAML 229 (478)
T ss_dssp HHHTGG-GGSSSCCEEEECHHHHHHHHHHHHHHH
T ss_pred HHHHHH-HhccCCeEEcCCHHHHHHHHHHHHHHH
Confidence 999985 55 3788899999999999999874
No 20
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=99.76 E-value=1.3e-17 Score=153.23 Aligned_cols=157 Identities=18% Similarity=0.230 Sum_probs=122.5
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
+|||+|||+|+||++++..|+++ | +.+ .+|++|+|++++++++.+
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~-g-~~~-~~V~v~dr~~~~~~~l~~-------------------------------- 47 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIAN-G-YDP-NRICVTNRSLDKLDFFKE-------------------------------- 47 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHT-T-CCG-GGEEEECSSSHHHHHHHH--------------------------------
T ss_pred CCEEEEEcccHHHHHHHHHHHHC-C-CCC-CeEEEEeCCHHHHHHHHH--------------------------------
Confidence 48999999999999999999998 8 111 289999999987653210
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHH-hhccCCCCEEEEeeccCc
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRY-WKERITVPVIISLAKGVE 201 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~-l~~~~~~~iivs~~nGi~ 201 (303)
. .++.+++++.++++++|+||+|||++.+++++++|.++ +++ +++|+|+++|+.
T Consensus 48 --~--------------------~gi~~~~~~~~~~~~aDvVilav~p~~~~~vl~~l~~~~l~~---~~iiiS~~agi~ 102 (280)
T 3tri_A 48 --K--------------------CGVHTTQDNRQGALNADVVVLAVKPHQIKMVCEELKDILSET---KILVISLAVGVT 102 (280)
T ss_dssp --T--------------------TCCEEESCHHHHHSSCSEEEECSCGGGHHHHHHHHHHHHHTT---TCEEEECCTTCC
T ss_pred --H--------------------cCCEEeCChHHHHhcCCeEEEEeCHHHHHHHHHHHHhhccCC---CeEEEEecCCCC
Confidence 0 03556778888899999999999999999999999998 887 679999999998
Q ss_pred cccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHHHhccCceEEEEe--CChhhHHHHHHHhcCCCeEEEec
Q 022050 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARIC--GAEKWRKPLAKFLRRPHFTVWDN 274 (303)
Q Consensus 202 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~ev~~g~~~~~~~~--~~~~~~~~i~~lf~~~g~~~~~~ 274 (303)
.+ .+.+.++.+. + .++.+||++..+..|.... +.+ .+++..+.+..+|+.-|..+++.
T Consensus 103 ~~------------~l~~~l~~~~-~-vvr~mPn~p~~v~~g~~~l-~~~~~~~~~~~~~v~~l~~~iG~~~~v~ 162 (280)
T 3tri_A 103 TP------------LIEKWLGKAS-R-IVRAMPNTPSSVRAGATGL-FANETVDKDQKNLAESIMRAVGLVIWVS 162 (280)
T ss_dssp HH------------HHHHHHTCCS-S-EEEEECCGGGGGTCEEEEE-ECCTTSCHHHHHHHHHHHGGGEEEEECS
T ss_pred HH------------HHHHHcCCCC-e-EEEEecCChHHhcCccEEE-EeCCCCCHHHHHHHHHHHHHCCCeEEEC
Confidence 64 4777776432 2 5778999999887774322 222 34567899999999999877763
No 21
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=99.76 E-value=8.5e-18 Score=164.47 Aligned_cols=198 Identities=15% Similarity=0.124 Sum_probs=142.2
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhcC
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (303)
|||+|||+|+||..+|..|+++ | ++|++||+++++++.+++. .++.+.+++..
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~-G-----~~V~~~D~~~~~v~~l~~g-----------------~~~i~e~gl~~---- 55 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL-G-----ANVRCIDTDRNKIEQLNSG-----------------TIPIYEPGLEK---- 55 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHHHHHHHT-----------------CSCCCSTTHHH----
T ss_pred CEEEEECcCHHHHHHHHHHHhc-C-----CEEEEEECCHHHHHHHHcC-----------------CCcccCCCHHH----
Confidence 8999999999999999999999 9 9999999999888765421 13344443310
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch----------hHHHHHHHHHHHhhccCCCCEE
Q 022050 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST----------ETKEVFEEISRYWKERITVPVI 193 (303)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~----------~~~~vl~~l~~~l~~~~~~~ii 193 (303)
++.+... ..++++++|+++++++||+||+|||+. ++++++++|.+++++ +++|
T Consensus 56 -------~l~~~~~-------~~~l~~t~d~~ea~~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~---g~iV 118 (450)
T 3gg2_A 56 -------MIARNVK-------AGRLRFGTEIEQAVPEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSR---YILI 118 (450)
T ss_dssp -------HHHHHHH-------TTSEEEESCHHHHGGGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCS---CEEE
T ss_pred -------HHHhhcc-------cCcEEEECCHHHHHhcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCC---CCEE
Confidence 0000000 025889999999899999999999987 899999999999987 6766
Q ss_pred EEeeccCccccccccccCCHHHHHHhHhCCC--CccEEEEeCCCcHHHHhc----cCceEEEEe-CChhhHHHHHHHhcC
Q 022050 194 ISLAKGVEAELEAVPRIITPTQMINRATGVP--IENILYLGGPNIASEIYN----KEYANARIC-GAEKWRKPLAKFLRR 266 (303)
Q Consensus 194 vs~~nGi~~~~~~~~~~~~~~~~i~~~l~~~--~~~~~v~~GP~~a~ev~~----g~~~~~~~~-~~~~~~~~i~~lf~~ 266 (303)
|..+ ++.+. +...+.+.+.+..+.. ...+.+.++|+++.+... ..+..++++ .+.+..+.++.+|+.
T Consensus 119 V~~S-Tv~pg-----t~~~l~~~l~~~~~~~~~~~d~~v~~~Pe~a~eG~~~~~~~~p~~ivvG~~~~~~~~~~~~l~~~ 192 (450)
T 3gg2_A 119 VTKS-TVPVG-----SYRLIRKAIQEELDKREVLIDFDIASNPEFLKEGNAIDDFMKPDRVVVGVDSDRARELITSLYKP 192 (450)
T ss_dssp EECS-CCCTT-----HHHHHHHHHHHHHHHTTCCCCEEEEECCCCCCTTSHHHHHHSCSCEEEEESSHHHHHHHHHHHTT
T ss_pred EEee-eCCCc-----chHHHHHHHHHhccccCcCcceeEEechhhhcccchhhhccCCCEEEEEcCCHHHHHHHHHHHHH
Confidence 6554 56665 3344556665543211 123678999999887554 445445554 456788999999984
Q ss_pred CCe--EEEecCChhHHHHHHHHHHHHH
Q 022050 267 PHF--TVWDNGDLVTHEVMGGLKNVYA 291 (303)
Q Consensus 267 ~g~--~~~~~~Di~g~e~~~~lkNv~A 291 (303)
-+- ..+...|+.+.|+.|..-|.+.
T Consensus 193 ~~~~~~~~~~~d~~~aE~~Kl~~N~~~ 219 (450)
T 3gg2_A 193 MLLNNFRVLFMDIASAEMTKYAANAML 219 (450)
T ss_dssp TCCSCCCEEEECHHHHHHHHHHHHHHH
T ss_pred HhcCCCeEEecCHHHHHHHHHHHHHHH
Confidence 332 1456789999999999999864
No 22
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=99.75 E-value=2.6e-18 Score=156.29 Aligned_cols=179 Identities=12% Similarity=0.070 Sum_probs=127.8
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhcC
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (303)
|||+|||+|+||+++|..|+++ | ++|++|+|++++++.++..+ ..+.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~-g-----~~V~~~~r~~~~~~~l~~~~---------------------~~~~------ 47 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQ-G-----HEVQGWLRVPQPYCSVNLVE---------------------TDGS------ 47 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCSEEEEEEEC---------------------TTSC------
T ss_pred CeEEEECcCHHHHHHHHHHHhC-C-----CCEEEEEcCccceeeEEEEc---------------------CCCc------
Confidence 7999999999999999999999 8 89999999987654321100 0000
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeeccCccc
Q 022050 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEAE 203 (303)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nGi~~~ 203 (303)
.+. ..+. .++. ++++++|+||++||++.++++++++.+++++ +++|++++||+...
T Consensus 48 -~~~------------------~~~~-~~~~-~~~~~~d~vi~~v~~~~~~~v~~~l~~~l~~---~~~vv~~~~g~~~~ 103 (291)
T 1ks9_A 48 -IFN------------------ESLT-ANDP-DFLATSDLLLVTLKAWQVSDAVKSLASTLPV---TTPILLIHNGMGTI 103 (291)
T ss_dssp -EEE------------------EEEE-ESCH-HHHHTCSEEEECSCGGGHHHHHHHHHTTSCT---TSCEEEECSSSCTT
T ss_pred -eee------------------eeee-ecCc-cccCCCCEEEEEecHHhHHHHHHHHHhhCCC---CCEEEEecCCCCcH
Confidence 000 0122 2343 5678999999999999999999999998887 78999999998653
Q ss_pred cccccccCCHHHHHHhHhCC--CC--ccEEEEeCCCcHHHHhccCceEEEEeCChhhHHHHHHHhcCCCeEEEecCChhH
Q 022050 204 LEAVPRIITPTQMINRATGV--PI--ENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDLVT 279 (303)
Q Consensus 204 ~~~~~~~~~~~~~i~~~l~~--~~--~~~~v~~GP~~a~ev~~g~~~~~~~~~~~~~~~~i~~lf~~~g~~~~~~~Di~g 279 (303)
. .+.+.++. .. ...+.+.|| .+.+...|...+.....+.+..+.++++|+..|++++..+|+.+
T Consensus 104 ~-----------~l~~~~~~~~~g~~~~~~~~~~p-~~~~~~~g~~~i~~~~~~~~~~~~~~~ll~~~g~~~~~~~~~~~ 171 (291)
T 1ks9_A 104 E-----------ELQNIQQPLLMGTTTHAARRDGN-VIIHVANGITHIGPARQQDGDYSYLADILQTVLPDVAWHNNIRA 171 (291)
T ss_dssp G-----------GGTTCCSCEEEEEECCEEEEETT-EEEEEECCCEEEEESSGGGTTCTHHHHHHHTTSSCEEECTTHHH
T ss_pred H-----------HHHHhcCCeEEEEEeEccEEcCC-EEEEecccceEEccCCCCcchHHHHHHHHHhcCCCCeecHHHHH
Confidence 1 23333332 00 113468899 66666666422212133445678899999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 022050 280 HEVMGGLKNVYA 291 (303)
Q Consensus 280 ~e~~~~lkNv~A 291 (303)
..|.+.+-|..-
T Consensus 172 ~~~~Kl~~n~~~ 183 (291)
T 1ks9_A 172 ELWRKLAVNCVI 183 (291)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHeeeeee
Confidence 999999888753
No 23
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=99.73 E-value=5.2e-17 Score=146.02 Aligned_cols=162 Identities=17% Similarity=0.098 Sum_probs=120.3
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
+|||+|||+|+||.+++..|+++ |++.+ .+|++|+|++++++++.+ ..
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~~-g~~~~-~~V~~~~r~~~~~~~~~~-------------------------~~----- 49 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMINK-NIVSS-NQIICSDLNTANLKNASE-------------------------KY----- 49 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-TSSCG-GGEEEECSCHHHHHHHHH-------------------------HH-----
T ss_pred CCeEEEECccHHHHHHHHHHHhC-CCCCC-CeEEEEeCCHHHHHHHHH-------------------------Hh-----
Confidence 37999999999999999999998 82111 299999999876653210 00
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeeccCcc
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nGi~~ 202 (303)
++..++++.++++++|+||++||++.++++++++.+++++ +++|+|.++|+..
T Consensus 50 ------------------------g~~~~~~~~e~~~~aDvVilav~~~~~~~v~~~l~~~l~~---~~~vvs~~~gi~~ 102 (247)
T 3gt0_A 50 ------------------------GLTTTTDNNEVAKNADILILSIKPDLYASIINEIKEIIKN---DAIIVTIAAGKSI 102 (247)
T ss_dssp ------------------------CCEECSCHHHHHHHCSEEEECSCTTTHHHHC---CCSSCT---TCEEEECSCCSCH
T ss_pred ------------------------CCEEeCChHHHHHhCCEEEEEeCHHHHHHHHHHHHhhcCC---CCEEEEecCCCCH
Confidence 3445678888889999999999999999999999988877 7899999999876
Q ss_pred ccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHHHhccCceEEEEe--CChhhHHHHHHHhcCCCeEEEecCChh
Q 022050 203 ELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARIC--GAEKWRKPLAKFLRRPHFTVWDNGDLV 278 (303)
Q Consensus 203 ~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~ev~~g~~~~~~~~--~~~~~~~~i~~lf~~~g~~~~~~~Di~ 278 (303)
+ .+++.++.+ ...+..+|+++..+..|... ++.. .+.+..+.++.+|+..|..+++.++..
T Consensus 103 ~------------~l~~~~~~~--~~~v~~~p~~p~~~~~g~~~-~~~~~~~~~~~~~~~~~l~~~~G~~~~~~e~~~ 165 (247)
T 3gt0_A 103 E------------STENAFNKK--VKVVRVMPNTPALVGEGMSA-LCPNEMVTEKDLEDVLNIFNSFGQTEIVSEKLM 165 (247)
T ss_dssp H------------HHHHHHCSC--CEEEEEECCGGGGGTCEEEE-EEECTTCCHHHHHHHHHHHGGGEEEEECCGGGH
T ss_pred H------------HHHHHhCCC--CcEEEEeCChHHHHcCceEE-EEeCCCCCHHHHHHHHHHHHhCCCEEEeCHHHc
Confidence 4 466777542 23567899999887776432 2222 456678999999999998777765543
No 24
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=99.72 E-value=9.3e-17 Score=150.16 Aligned_cols=166 Identities=13% Similarity=0.096 Sum_probs=122.6
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCc--hhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR--SVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~--~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (303)
+|||+|||+|+||+++|..|+++ |.+.. ++|++|+|+++ ++++++ .
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~-G~~~~-~~V~v~~r~~~~~~~~~l~--------------------------~---- 69 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAA-GVLAA-HKIMASSPDMDLATVSALR--------------------------K---- 69 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHT-TSSCG-GGEEEECSCTTSHHHHHHH--------------------------H----
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCCCc-ceEEEECCCccHHHHHHHH--------------------------H----
Confidence 37999999999999999999998 73222 68999999975 443211 0
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeeccC
Q 022050 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (303)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nGi 200 (303)
..+.+++++.++++++|+||++||++.++++++++.+.+.+ +++||++++|+
T Consensus 70 -------------------------~G~~~~~~~~e~~~~aDvVilav~~~~~~~vl~~l~~~l~~---~~ivvs~s~gi 121 (322)
T 2izz_A 70 -------------------------MGVKLTPHNKETVQHSDVLFLAVKPHIIPFILDEIGADIED---RHIVVSCAAGV 121 (322)
T ss_dssp -------------------------HTCEEESCHHHHHHHCSEEEECSCGGGHHHHHHHHGGGCCT---TCEEEECCTTC
T ss_pred -------------------------cCCEEeCChHHHhccCCEEEEEeCHHHHHHHHHHHHhhcCC---CCEEEEeCCCC
Confidence 02445667878888999999999999999999999988876 78999999998
Q ss_pred ccccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHHHhccCceEEEEeC--ChhhHHHHHHHhcCCCeEEEecCChh
Q 022050 201 EAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICG--AEKWRKPLAKFLRRPHFTVWDNGDLV 278 (303)
Q Consensus 201 ~~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~ev~~g~~~~~~~~~--~~~~~~~i~~lf~~~g~~~~~~~Di~ 278 (303)
.... +++.+.+.++. . ..+..+|+++.++..+. ...+.+. +.+..+.++++|+..|+.++..+|+.
T Consensus 122 ~~~~--------l~~~l~~~~~~--~-~vv~~~p~~p~~~~~g~-~v~~~g~~~~~~~~~~v~~ll~~~G~~~~~~e~~~ 189 (322)
T 2izz_A 122 TISS--------IEKKLSAFRPA--P-RVIRCMTNTPVVVREGA-TVYATGTHAQVEDGRLMEQLLSSVGFCTEVEEDLI 189 (322)
T ss_dssp CHHH--------HHHHHHTTSSC--C-EEEEEECCGGGGGTCEE-EEEEECTTCCHHHHHHHHHHHHTTEEEEECCGGGH
T ss_pred CHHH--------HHHHHhhcCCC--C-eEEEEeCCcHHHHcCCe-EEEEeCCCCCHHHHHHHHHHHHhCCCEEEeCHHHH
Confidence 7641 23334443332 1 35778999998887764 2222222 25678899999999999998887765
Q ss_pred HH
Q 022050 279 TH 280 (303)
Q Consensus 279 g~ 280 (303)
..
T Consensus 190 ~~ 191 (322)
T 2izz_A 190 DA 191 (322)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 25
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=99.68 E-value=5.8e-16 Score=137.15 Aligned_cols=170 Identities=14% Similarity=0.157 Sum_probs=123.3
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEE-EecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRI-WRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l-~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
+|||+|||+|+||.++|..|+++ | ++|++ |+|++++++++..+ .
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~-g-----~~V~~v~~r~~~~~~~l~~~-------------------------~---- 67 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAA-Q-----IPAIIANSRGPASLSSVTDR-------------------------F---- 67 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHT-T-----CCEEEECTTCGGGGHHHHHH-------------------------H----
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-----CEEEEEECCCHHHHHHHHHH-------------------------h----
Confidence 58999999999999999999998 8 89999 99998876542210 0
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeeccCc
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nGi~ 201 (303)
.+..+.+..++++++|+||++||++.++++++++.+ ++ +++|+++++|+.
T Consensus 68 -------------------------g~~~~~~~~~~~~~aDvVilavp~~~~~~v~~~l~~-~~----~~ivi~~~~g~~ 117 (220)
T 4huj_A 68 -------------------------GASVKAVELKDALQADVVILAVPYDSIADIVTQVSD-WG----GQIVVDASNAID 117 (220)
T ss_dssp -------------------------TTTEEECCHHHHTTSSEEEEESCGGGHHHHHTTCSC-CT----TCEEEECCCCBC
T ss_pred -------------------------CCCcccChHHHHhcCCEEEEeCChHHHHHHHHHhhc-cC----CCEEEEcCCCCC
Confidence 011222334567899999999999999999999876 43 679999999996
Q ss_pred ccccccc--ccCCHHHHHHhHhCCCCccEEEEeCCCcHHHHhc-cC-----ceEEEE-eCChhhHHHHHHHhcCCCeEEE
Q 022050 202 AELEAVP--RIITPTQMINRATGVPIENILYLGGPNIASEIYN-KE-----YANARI-CGAEKWRKPLAKFLRRPHFTVW 272 (303)
Q Consensus 202 ~~~~~~~--~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~ev~~-g~-----~~~~~~-~~~~~~~~~i~~lf~~~g~~~~ 272 (303)
......+ +..+..+.+++.++. ..++...|+++..+.. +. +..++. +.+.+..+.++++|+..|++++
T Consensus 118 ~~~~~~~~~~~~~~~~~l~~~l~~---~~vv~~~~~~~~~v~~~g~~~~~~~~~v~~~g~~~~~~~~v~~l~~~~G~~~~ 194 (220)
T 4huj_A 118 FPAFKPRDLGGRLSTEIVSELVPG---AKVVKAFNTLPAAVLAADPDKGTGSRVLFLSGNHSDANRQVAELISSLGFAPV 194 (220)
T ss_dssp TTTCCBCCCTTCCHHHHHHHHSTT---CEEEEESCSSCHHHHTSCSBCSSCEEEEEEEESCHHHHHHHHHHHHHTTCEEE
T ss_pred cccccccccCCCcHHHHHHHHCCC---CCEEECCCCCCHHHhhhCcccCCCCeeEEEeCCCHHHHHHHHHHHHHhCCCeE
Confidence 1100000 233466788888863 2457788888777665 22 222333 4566788999999999999999
Q ss_pred ecCChhHH
Q 022050 273 DNGDLVTH 280 (303)
Q Consensus 273 ~~~Di~g~ 280 (303)
...++...
T Consensus 195 ~~G~l~~a 202 (220)
T 4huj_A 195 DLGTLAAS 202 (220)
T ss_dssp ECCSHHHH
T ss_pred eeCChhhc
Confidence 88887544
No 26
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.67 E-value=4e-16 Score=142.23 Aligned_cols=181 Identities=16% Similarity=0.099 Sum_probs=122.5
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCe--eEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV--LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~--~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (303)
||||+|||+|+||+++|..|++. | + +|++|+|++++++.+.. . +.
T Consensus 1 m~~I~iIG~G~mG~~~a~~l~~~-g-----~~~~V~~~d~~~~~~~~~~~-----------------------~-g~--- 47 (281)
T 2g5c_A 1 MQNVLIVGVGFMGGSFAKSLRRS-G-----FKGKIYGYDINPESISKAVD-----------------------L-GI--- 47 (281)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHT-T-----CCSEEEEECSCHHHHHHHHH-----------------------T-TS---
T ss_pred CcEEEEEecCHHHHHHHHHHHhc-C-----CCcEEEEEeCCHHHHHHHHH-----------------------C-CC---
Confidence 47999999999999999999998 8 6 89999999876543110 0 00
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc-CCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeecc
Q 022050 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW-DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (303)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~-~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nG 199 (303)
....++++.++++ ++|+||++||++...++++++.+++++ +++|+.++++
T Consensus 48 --------------------------~~~~~~~~~~~~~~~aDvVilavp~~~~~~v~~~l~~~l~~---~~iv~~~~~~ 98 (281)
T 2g5c_A 48 --------------------------IDEGTTSIAKVEDFSPDFVMLSSPVRTFREIAKKLSYILSE---DATVTDQGSV 98 (281)
T ss_dssp --------------------------CSEEESCGGGGGGTCCSEEEECSCHHHHHHHHHHHHHHSCT---TCEEEECCSC
T ss_pred --------------------------cccccCCHHHHhcCCCCEEEEcCCHHHHHHHHHHHHhhCCC---CcEEEECCCC
Confidence 1123466777788 999999999999999999999988877 6766655433
Q ss_pred CccccccccccCCHHHHHHhHhCC---CCccEE--EEeCCCcHH-HHhccCceEEEE--eCChhhHHHHHHHhcCCCeEE
Q 022050 200 VEAELEAVPRIITPTQMINRATGV---PIENIL--YLGGPNIAS-EIYNKEYANARI--CGAEKWRKPLAKFLRRPHFTV 271 (303)
Q Consensus 200 i~~~~~~~~~~~~~~~~i~~~l~~---~~~~~~--v~~GP~~a~-ev~~g~~~~~~~--~~~~~~~~~i~~lf~~~g~~~ 271 (303)
... ..+.+.+.++. +.+|+. ..+||.++. ++..+.++.++. +.+.+..+.++++|+..|+++
T Consensus 99 -~~~---------~~~~l~~~l~~~~v~~~p~~~~~~~gp~~a~~~l~~g~~~~~~~~~~~~~~~~~~v~~l~~~~g~~~ 168 (281)
T 2g5c_A 99 -KGK---------LVYDLENILGKRFVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTDKKRLKLVKRVWEDVGGVV 168 (281)
T ss_dssp -CTH---------HHHHHHHHHGGGEECEEEECCCSCCSGGGCCSSTTTTCEEEECCCSSSCHHHHHHHHHHHHHTTCEE
T ss_pred -cHH---------HHHHHHHhccccceeeccccCCccCChhhhhhHHhCCCCEEEecCCCCCHHHHHHHHHHHHHcCCEE
Confidence 221 11223343321 112221 234666654 345565444333 345567899999999999999
Q ss_pred EecCChhH---HHHHHHHHHHHHHHHH
Q 022050 272 WDNGDLVT---HEVMGGLKNVYAIGAG 295 (303)
Q Consensus 272 ~~~~Di~g---~e~~~~lkNv~Ai~~G 295 (303)
+..++... +.+++.++|+++++.+
T Consensus 169 ~~~~~~~~d~~~~~~~~~~~~~a~~~~ 195 (281)
T 2g5c_A 169 EYMSPELHDYVFGVVSHLPHAVAFALV 195 (281)
T ss_dssp EECCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred EEcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88887776 5666667777655443
No 27
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.65 E-value=3.5e-15 Score=134.18 Aligned_cols=194 Identities=12% Similarity=0.108 Sum_probs=124.8
Q ss_pred CCCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCch--hhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhh
Q 022050 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS--VDRATAEHLFEVINSREDVLRRLIRRCAYLKYVE 118 (303)
Q Consensus 41 ~~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~--~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~ 118 (303)
-..|||+|||+|+||+++|..|+++ | ++|++|+|++++ .+....+ +. +. ....+.
T Consensus 17 ~~~~kIgiIG~G~mG~alA~~L~~~-G-----~~V~~~~r~~~~~~~~~~~~~-----~~-----------~~-~~~~~~ 73 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGRTMAGALADL-G-----HEVTIGTRDPKATLARAEPDA-----MG-----------AP-PFSQWL 73 (245)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHHTCC-----------------------C-CHHHHG
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHC-C-----CEEEEEeCChhhhhhhhhhhh-----hc-----------ch-hhhHHH
Confidence 3458999999999999999999999 8 899999999875 2111000 00 00 000000
Q ss_pred hhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHH-HHHhhccCCCCEEEEee
Q 022050 119 ARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEI-SRYWKERITVPVIISLA 197 (303)
Q Consensus 119 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l-~~~l~~~~~~~iivs~~ 197 (303)
+ .+ ... ..+++.+++++||+||++||++...+++.++ .+++ + +++||+++
T Consensus 74 ----~-~~-------------------~~~-~~~~~~e~~~~aDvVilavp~~~~~~~~~~i~~~~l-~---g~ivi~~s 124 (245)
T 3dtt_A 74 ----P-EH-------------------PHV-HLAAFADVAAGAELVVNATEGASSIAALTAAGAENL-A---GKILVDIA 124 (245)
T ss_dssp ----G-GS-------------------TTC-EEEEHHHHHHHCSEEEECSCGGGHHHHHHHHCHHHH-T---TSEEEECC
T ss_pred ----h-hc-------------------Cce-eccCHHHHHhcCCEEEEccCcHHHHHHHHHhhhhhc-C---CCEEEECC
Confidence 0 00 112 3456778889999999999999999999998 7777 4 78999999
Q ss_pred ccCccc-----cccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHHHhccC------ceEEEEe-CChhhHHHHHHHhc
Q 022050 198 KGVEAE-----LEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKE------YANARIC-GAEKWRKPLAKFLR 265 (303)
Q Consensus 198 nGi~~~-----~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~ev~~g~------~~~~~~~-~~~~~~~~i~~lf~ 265 (303)
||+... +...++.....+.+++.++. . .++...|+....+..+. +..++++ .+.+..+.++.+|+
T Consensus 125 ~~~~~~~G~~~t~~~~~~~~~~~~l~~~l~~--~-~vv~~~~~~~a~v~~~~~~a~~g~~~~~v~g~d~~~~~~v~~ll~ 201 (245)
T 3dtt_A 125 NPLDFSHGMPPTLNPVNTDSLGEQIQRTFPE--A-KVVKTLNTMNASLMVDPGRAAGGDHSVFVSGNDAAAKAEVATLLK 201 (245)
T ss_dssp CCEECTTCSSCEESSCSSCCHHHHHHHHSTT--S-EEEECSTTSCHHHHHCGGGTGGGCCCEEEECSCHHHHHHHHHHHH
T ss_pred CCCCCcCCccccccCCCCccHHHHHHHHCCC--C-eEEEeecccCHHHhcCccccCCCCeeEEEECCCHHHHHHHHHHHH
Confidence 876321 00112345677888888863 2 34556666655554332 2223344 45678899999999
Q ss_pred CCCeE-EEecCChhHHHHHHHHHHH
Q 022050 266 RPHFT-VWDNGDLVTHEVMGGLKNV 289 (303)
Q Consensus 266 ~~g~~-~~~~~Di~g~e~~~~lkNv 289 (303)
..+++ ++...++-.....+.+-|.
T Consensus 202 ~~g~~~~~~~G~~g~a~~~k~~~~~ 226 (245)
T 3dtt_A 202 SLGHQDVIDLGDITTARGAEMLLPV 226 (245)
T ss_dssp HTTCCCEEEEESGGGHHHHHTTHHH
T ss_pred HcCCCceeccCcHHHHHHhhhhHHH
Confidence 99985 4555555444444444443
No 28
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=99.64 E-value=3.5e-15 Score=146.81 Aligned_cols=199 Identities=11% Similarity=0.052 Sum_probs=140.8
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCe-eEEEEecCCc----hhhhhhhhhHHHHHhhhhhHHHHhhhhcc--cc
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGR----SVDRATAEHLFEVINSREDVLRRLIRRCA--YL 114 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~-~V~l~~r~~~----~~~~~~~~~l~~~i~~~~~~~~~~~~~~~--~l 114 (303)
.+|||+|||+|.||..+|..|+++.| + +|++||++++ +++.++.. .++. +.
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G-----~~~V~~~D~~~~~~~~kv~~l~~g-----------------~~~i~~~e 74 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPC-----FEKVLGFQRNSKSSGYKIEMLNRG-----------------ESPLKGEE 74 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTT-----CCEEEEECCCCTTTTTHHHHHTTT-----------------CCCSSCCG
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCC-----CCeEEEEECChhHhHHHHHHHHhc-----------------CCCccccC
Confidence 56899999999999999999998525 8 9999999999 77665421 1222 33
Q ss_pred hhhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh------------HHHHHHHHHH
Q 022050 115 KYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE------------TKEVFEEISR 182 (303)
Q Consensus 115 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~------------~~~vl~~l~~ 182 (303)
+++.. ++.++.. ..++.+++| .+++++||+||++||... +..+.+.|.+
T Consensus 75 ~gl~~-----------l~~~~~~-------~g~l~~ttd-~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~ 135 (478)
T 3g79_A 75 PGLEE-----------LIGKVVK-------AGKFECTPD-FSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGK 135 (478)
T ss_dssp GGHHH-----------HHHHHHH-------TTCEEEESC-GGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHH
T ss_pred CCHHH-----------HHHhhcc-------cCCeEEeCc-HHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHh
Confidence 33210 0000000 026888988 568899999999998763 6778889999
Q ss_pred HhhccCCCCEEEEeeccCccccccccccCCHHH-HHHhHhCCC-CccEEEEeCCCcHHHHhc----cCceEEEEeCChhh
Q 022050 183 YWKERITVPVIISLAKGVEAELEAVPRIITPTQ-MINRATGVP-IENILYLGGPNIASEIYN----KEYANARICGAEKW 256 (303)
Q Consensus 183 ~l~~~~~~~iivs~~nGi~~~~~~~~~~~~~~~-~i~~~l~~~-~~~~~v~~GP~~a~ev~~----g~~~~~~~~~~~~~ 256 (303)
++++ +++|| ..+++.+. +...+.+ ++++..|.. ...+.++++|.+..+... ..+..++.+.+.+.
T Consensus 136 ~l~~---g~iVV-~~STv~pg-----tt~~v~~~ile~~~g~~~~~d~~v~~~Pe~~~~G~a~~~~~~~~~Iv~G~~~~~ 206 (478)
T 3g79_A 136 YLKP---GMLVV-LESTITPG-----TTEGMAKQILEEESGLKAGEDFALAHAPERVMVGRLLKNIREHDRIVGGIDEAS 206 (478)
T ss_dssp HCCT---TCEEE-ECSCCCTT-----TTTTHHHHHHHHHHCCCBTTTBEEEECCCCCCTTSHHHHHHHSCEEEEESSHHH
T ss_pred hcCC---CcEEE-EeCCCChH-----HHHHHHHHHHHHhcCCCcCCceeEEeCCccCCccchhhhhcCCcEEEEeCCHHH
Confidence 9887 66655 66688886 4566665 443555531 124678999998765432 12334555677777
Q ss_pred HHHHHHHhcCC-CeEEEecCChhHHHHHHHHHHHH
Q 022050 257 RKPLAKFLRRP-HFTVWDNGDLVTHEVMGGLKNVY 290 (303)
Q Consensus 257 ~~~i~~lf~~~-g~~~~~~~Di~g~e~~~~lkNv~ 290 (303)
.++++.+|+.- +..++...|+...|++|.+.|.+
T Consensus 207 ~~~~~~ly~~~~~~~~~~~~~~~~aE~~Kl~~N~~ 241 (478)
T 3g79_A 207 TKRAVELYSPVLTVGQVIPMSATAAEVTKTAENTF 241 (478)
T ss_dssp HHHHHHHHGGGCSSCCEEEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhccCCeEEeCCHHHHHHHHHHHHHH
Confidence 89999999876 56677778999999999999987
No 29
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=99.64 E-value=3.5e-15 Score=134.36 Aligned_cols=154 Identities=12% Similarity=0.148 Sum_probs=116.4
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
+|||+|||+|+||+++|..|+++ |++.+ ++|++|+|++++ .
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~-g~~~~-~~v~~~~~~~~~-~------------------------------------ 44 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANA-NIIKK-ENLFYYGPSKKN-T------------------------------------ 44 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHH-TSSCG-GGEEEECSSCCS-S------------------------------------
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-CCCCC-CeEEEEeCCccc-C------------------------------------
Confidence 48999999999999999999998 72221 589999998752 0
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeeccCcc
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nGi~~ 202 (303)
.+..++++.++++++|+||++||++.++++++++.+++ + ++++++.++|+..
T Consensus 45 ------------------------g~~~~~~~~~~~~~~D~vi~~v~~~~~~~v~~~l~~~l-~---~~~vv~~~~gi~~ 96 (262)
T 2rcy_A 45 ------------------------TLNYMSSNEELARHCDIIVCAVKPDIAGSVLNNIKPYL-S---SKLLISICGGLNI 96 (262)
T ss_dssp ------------------------SSEECSCHHHHHHHCSEEEECSCTTTHHHHHHHSGGGC-T---TCEEEECCSSCCH
T ss_pred ------------------------ceEEeCCHHHHHhcCCEEEEEeCHHHHHHHHHHHHHhc-C---CCEEEEECCCCCH
Confidence 13344567777889999999999999999999998887 4 5789999999876
Q ss_pred ccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHHHhccCceEEEEeC--ChhhHHHHHHHhcCCCeEEEecCChh
Q 022050 203 ELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICG--AEKWRKPLAKFLRRPHFTVWDNGDLV 278 (303)
Q Consensus 203 ~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~ev~~g~~~~~~~~~--~~~~~~~i~~lf~~~g~~~~~~~Di~ 278 (303)
+ .+.+.++.. .+ .+..+|+++.....| .+.++... +.+..+.++++|+..|..++..++..
T Consensus 97 ~------------~l~~~~~~~-~~-~v~~~p~~p~~~~~g-~~~~~~~~~~~~~~~~~~~~ll~~~G~~~~~~~~~~ 159 (262)
T 2rcy_A 97 G------------KLEEMVGSE-NK-IVWVMPNTPCLVGEG-SFIYCSNKNVNSTDKKYVNDIFNSCGIIHEIKEKDM 159 (262)
T ss_dssp H------------HHHHHHCTT-SE-EEEEECCGGGGGTCE-EEEEEECTTCCHHHHHHHHHHHHTSEEEEECCGGGH
T ss_pred H------------HHHHHhCCC-Cc-EEEECCChHHHHcCC-eEEEEeCCCCCHHHHHHHHHHHHhCCCEEEeCHHHc
Confidence 4 366667542 12 356789999888777 44333332 45678999999999998556666643
No 30
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=99.63 E-value=3.1e-16 Score=150.40 Aligned_cols=198 Identities=13% Similarity=0.129 Sum_probs=122.8
Q ss_pred CceEEEECCChHHHHHHHHHHH-hcCCCCCCeeEEEEe---cCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQD-SYGYLRDKVLIRIWR---RPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVE 118 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~-~~G~~~~~~~V~l~~---r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~ 118 (303)
+|||+|||+|+||+++|..|++ + | ++|++|+ |++++++++ ++.... .-+..+..+.
T Consensus 2 ~mkI~ViGaG~~G~~~a~~La~~~-G-----~~V~~~~~~~r~~~~~~~~--------~~~~g~-----~~~~~~~~~~- 61 (404)
T 3c7a_A 2 TVKVCVCGGGNGAHTLSGLAASRD-G-----VEVRVLTLFADEAERWTKA--------LGADEL-----TVIVNEKDGT- 61 (404)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTST-T-----EEEEEECCSTTHHHHHHHH--------HTTSCE-----EEEEECSSSC-
T ss_pred CceEEEECCCHHHHHHHHHHHhCC-C-----CEEEEEeCCCCcHHHHHHH--------Hhhccc-----eeeeecCCCc-
Confidence 4899999999999999999987 7 7 9999999 766555431 111000 0000000000
Q ss_pred hhhcCCcccchhhhhccccccCCCCCCCCeE-EecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEee
Q 022050 119 ARLGDRTLHADEILKDGFCLNMIDTPLCPLK-VVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (303)
Q Consensus 119 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~-~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~ 197 (303)
...+ ...+. +++|++++++++|+||+|||++.+++++++|.+++++ +++|++++
T Consensus 62 ----~~~~------------------~~~~~~~~~~~~~a~~~aD~Vilav~~~~~~~v~~~l~~~l~~---~~ivv~~~ 116 (404)
T 3c7a_A 62 ----QTEV------------------KSRPKVITKDPEIAISGADVVILTVPAFAHEGYFQAMAPYVQD---SALIVGLP 116 (404)
T ss_dssp ----EEEE------------------EECCSEEESCHHHHHTTCSEEEECSCGGGHHHHHHHHTTTCCT---TCEEEETT
T ss_pred ----ccee------------------eccceEEeCCHHHHhCCCCEEEEeCchHHHHHHHHHHHhhCCC---CcEEEEcC
Confidence 0000 01233 7788888889999999999999999999999999887 78888854
Q ss_pred --ccCccccccccccCCHHHHHHhH-----h-CCCCcc-EEEEeCCCcHHHHhccCceE--EEE-e--C-ChhhHHHHHH
Q 022050 198 --KGVEAELEAVPRIITPTQMINRA-----T-GVPIEN-ILYLGGPNIASEIYNKEYAN--ARI-C--G-AEKWRKPLAK 262 (303)
Q Consensus 198 --nGi~~~~~~~~~~~~~~~~i~~~-----l-~~~~~~-~~v~~GP~~a~ev~~g~~~~--~~~-~--~-~~~~~~~i~~ 262 (303)
+|+... ..+.+.+. + +....+ .+.+.||+++.++..+.... ... . . .....+.+++
T Consensus 117 ~~~G~~~~---------~~~~l~~~~~~~v~~~~~~~~~~~~~~gpg~~v~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~ 187 (404)
T 3c7a_A 117 SQAGFEFQ---------CRDILGDKAAAVSMMSFETLPWACRIKEFGRKVEVLGTKSVLAASLIKGTAKTVDPLSTLQML 187 (404)
T ss_dssp CCTTHHHH---------HHHHHGGGGGTSEEEEESSCSEEEEEEETTTEEEEEEECSEEEEEEECCSSCCSCHHHHHHHH
T ss_pred CCccHHHH---------HHHHHHhcCCCeEEEEecCchHhhcccCCCcEEEEEEECceEEEEEccCCcchHHHHHHHHHH
Confidence 443322 01223322 1 100122 35668899655554332111 112 2 1 1234455666
Q ss_pred HhcCCCeEEEecCChhHHHHHHHHHHHHHHHHHHHhh
Q 022050 263 FLRRPHFTVWDNGDLVTHEVMGGLKNVYAIGAGTIYF 299 (303)
Q Consensus 263 lf~~~g~~~~~~~Di~g~e~~~~lkNv~Ai~~G~~~g 299 (303)
++.++. +..++|+++++|.+ |+++.+.|++.+
T Consensus 188 ~~~~~~--~~~~~di~~~~l~~---N~~~~~~~~l~~ 219 (404)
T 3c7a_A 188 HGAEPV--FRLAKHFLEMLIMS---YSFVHPAILFGR 219 (404)
T ss_dssp HCSSSE--EEECSCHHHHHHTT---CTTHHHHHHHHH
T ss_pred hCCCCc--eeEcCCEeeeeecC---CceeccHHHHHH
Confidence 664333 44689999999996 999999888843
No 31
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=99.63 E-value=5.9e-15 Score=143.49 Aligned_cols=201 Identities=16% Similarity=0.102 Sum_probs=134.0
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhcC
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (303)
|||+|||+|+||+.+|..|+++ | ++|++|++++++++.++..+ .+.+.+++.
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~-G-----~~V~~~d~~~~~~~~l~~~~-----------------~~i~e~~l~----- 52 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSAR-G-----HEVIGVDVSSTKIDLINQGK-----------------SPIVEPGLE----- 52 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-T-----CEEEEECSCHHHHHHHHTTC-----------------CSSCCTTHH-----
T ss_pred CEEEEECCCHHHHHHHHHHHHC-C-----CEEEEEECCHHHHHHHhCCC-----------------CCcCCCCHH-----
Confidence 7999999999999999999999 8 89999999998877654321 122333221
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh----------HHHHHHHHHHHhhccCCCCEE
Q 022050 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE----------TKEVFEEISRYWKERITVPVI 193 (303)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~----------~~~vl~~l~~~l~~~~~~~ii 193 (303)
+.+..+.. ..++.+++|+++++++||+||+|||... +++++++|.+++++...+++|
T Consensus 53 ------~~~~~~~~-------~g~l~~t~~~~~~~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iV 119 (436)
T 1mv8_A 53 ------ALLQQGRQ-------TGRLSGTTDFKKAVLDSDVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTV 119 (436)
T ss_dssp ------HHHHHHHH-------TTCEEEESCHHHHHHTCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEE
T ss_pred ------HHHHhhcc-------cCceEEeCCHHHHhccCCEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEE
Confidence 00000000 0147888999888899999999998765 899999999988740002555
Q ss_pred EEeeccCccccccccccCCHHHHHHhHhCCCC-ccEEEEeCCCcHHHHhc----cCceEEEEe-CChhhHHHHHHHhcCC
Q 022050 194 ISLAKGVEAELEAVPRIITPTQMINRATGVPI-ENILYLGGPNIASEIYN----KEYANARIC-GAEKWRKPLAKFLRRP 267 (303)
Q Consensus 194 vs~~nGi~~~~~~~~~~~~~~~~i~~~l~~~~-~~~~v~~GP~~a~ev~~----g~~~~~~~~-~~~~~~~~i~~lf~~~ 267 (303)
|.. +++.+.+ +...+.+.+.+.++... ..+.+..+|.+..+... ..+..++.+ .+.+..+.++++|+..
T Consensus 120 V~~-Stv~~g~----t~~~l~~~l~~~~g~~~~~~~~v~~~Pe~~~~G~~~~~~~~~~~iv~G~~~~~~~~~~~~l~~~~ 194 (436)
T 1mv8_A 120 VVR-STVLPGT----VNNVVIPLIEDCSGKKAGVDFGVGTNPEFLRESTAIKDYDFPPMTVIGELDKQTGDLLEEIYREL 194 (436)
T ss_dssp EEC-SCCCTTH----HHHTHHHHHHHHHSCCBTTTBEEEECCCCCCTTSHHHHHHSCSCEEEEESSHHHHHHHHHHHTTS
T ss_pred EEe-CCcCCCc----hHHHHHHHHHHhcCcccCCcEEEEECcccccccccchhccCCCEEEEEcCCHHHHHHHHHHHhcc
Confidence 543 3444431 02334455555434211 12456788888664322 223234444 3466778899999988
Q ss_pred CeEEEecCChhHHHHHHHHHHHHH
Q 022050 268 HFTVWDNGDLVTHEVMGGLKNVYA 291 (303)
Q Consensus 268 g~~~~~~~Di~g~e~~~~lkNv~A 291 (303)
+.+++. .|+...||.|.+-|.+.
T Consensus 195 ~~~v~~-~~~~~ae~~Kl~~N~~~ 217 (436)
T 1mv8_A 195 DAPIIR-KTVEVAEMIKYTCNVWH 217 (436)
T ss_dssp SSCEEE-EEHHHHHHHHHHHHHHH
T ss_pred CCCEEc-CCHHHHHHHHHHHHHHH
Confidence 887776 88999999999999864
No 32
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=99.61 E-value=1.5e-15 Score=142.32 Aligned_cols=161 Identities=18% Similarity=0.224 Sum_probs=113.4
Q ss_pred CCCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhh
Q 022050 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (303)
Q Consensus 41 ~~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (303)
....||+|||+|.||+.||..+|.+ | ++|++||++++.+++... .+... +.+..+... ++.
T Consensus 4 p~~~~VaViGaG~MG~giA~~~a~~-G-----~~V~l~D~~~~~l~~~~~-----~i~~~---l~~~~~~g~-~~~---- 64 (319)
T 3ado_A 4 PAAGDVLIVGSGLVGRSWAMLFASG-G-----FRVKLYDIEPRQITGALE-----NIRKE---MKSLQQSGS-LKG---- 64 (319)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSCHHHHHHHHH-----HHHHH---HHHHHHTTC-CCS----
T ss_pred CCCCeEEEECCcHHHHHHHHHHHhC-C-----CeEEEEECCHHHHHHHHH-----HHHHH---HHHHHHcCC-CCC----
Confidence 3457999999999999999999999 9 899999999987765321 11111 111111110 000
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch--hHHHHHHHHHHHhhccCCCCEEEEeec
Q 022050 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST--ETKEVFEEISRYWKERITVPVIISLAK 198 (303)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~--~~~~vl~~l~~~l~~~~~~~iivs~~n 198 (303)
...+++ .+..+..++|+.+++++||+||+|||+. .+++++++|..++++ ++++.|+|+
T Consensus 65 ----~~~~~~-------------~l~~i~~~~~l~~a~~~ad~ViEav~E~l~iK~~lf~~l~~~~~~---~aIlaSNTS 124 (319)
T 3ado_A 65 ----SLSAEE-------------QLSLISSCTNLAEAVEGVVHIQECVPENLDLKRKIFAQLDSIVDD---RVVLSSSSS 124 (319)
T ss_dssp ----SSCHHH-------------HHHTEEEECCHHHHTTTEEEEEECCCSCHHHHHHHHHHHHTTCCS---SSEEEECCS
T ss_pred ----ccCHHH-------------HHhhcccccchHhHhccCcEEeeccccHHHHHHHHHHHHHHHhhh---cceeehhhh
Confidence 000000 1136888999999999999999999997 589999999999998 899999999
Q ss_pred cCccccccccccCCHHHHHHhHhCCCCc---cEEEEeCCCcHHHHh
Q 022050 199 GVEAELEAVPRIITPTQMINRATGVPIE---NILYLGGPNIASEIY 241 (303)
Q Consensus 199 Gi~~~~~~~~~~~~~~~~i~~~l~~~~~---~~~v~~GP~~a~ev~ 241 (303)
++.++.+ ......|++++.-||..|.+ -+.++.||.|..++.
T Consensus 125 sl~is~i-a~~~~~p~r~ig~HffNP~~~m~LVEiv~g~~Ts~~~~ 169 (319)
T 3ado_A 125 CLLPSKL-FTGLAHVKQCIVAHPVNPPYYIPLVELVPHPETSPATV 169 (319)
T ss_dssp SCCHHHH-HTTCTTGGGEEEEEECSSTTTCCEEEEEECTTCCHHHH
T ss_pred hccchhh-hhhccCCCcEEEecCCCCccccchHHhcCCCCCcHHHH
Confidence 9998643 22345677777777655532 257888888877654
No 33
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.61 E-value=6.8e-15 Score=137.35 Aligned_cols=184 Identities=15% Similarity=0.114 Sum_probs=123.5
Q ss_pred CCCCCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhh
Q 022050 39 AEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVE 118 (303)
Q Consensus 39 ~~~~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~ 118 (303)
....+|||+|||+|.||..+|..|++. | ++|++|+|++++++++.+
T Consensus 27 ~~~~~~~I~iIG~G~mG~~~a~~l~~~-G-----~~V~~~dr~~~~~~~l~~---------------------------- 72 (320)
T 4dll_A 27 SDPYARKITFLGTGSMGLPMARRLCEA-G-----YALQVWNRTPARAASLAA---------------------------- 72 (320)
T ss_dssp --CCCSEEEEECCTTTHHHHHHHHHHT-T-----CEEEEECSCHHHHHHHHT----------------------------
T ss_pred cccCCCEEEEECccHHHHHHHHHHHhC-C-----CeEEEEcCCHHHHHHHHH----------------------------
Confidence 344568999999999999999999999 8 899999999876543210
Q ss_pred hhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCc-hhHHHHHH--HHHHHhhccCCCCEEEE
Q 022050 119 ARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS-TETKEVFE--EISRYWKERITVPVIIS 195 (303)
Q Consensus 119 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~-~~~~~vl~--~l~~~l~~~~~~~iivs 195 (303)
..+..+++++++++++|+||++||. ..+++++. ++.+.+.+ +++||.
T Consensus 73 ---------------------------~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~~~~~~l~~---~~~vi~ 122 (320)
T 4dll_A 73 ---------------------------LGATIHEQARAAARDADIVVSMLENGAVVQDVLFAQGVAAAMKP---GSLFLD 122 (320)
T ss_dssp ---------------------------TTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTTTCHHHHCCT---TCEEEE
T ss_pred ---------------------------CCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcchhHHhhCCC---CCEEEe
Confidence 0355678898999999999999996 57888887 77777776 778777
Q ss_pred eeccCccccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHHH--hccCceEEEEeCChhhHHHHHHHhcCCCeEEEe
Q 022050 196 LAKGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEI--YNKEYANARICGAEKWRKPLAKFLRRPHFTVWD 273 (303)
Q Consensus 196 ~~nGi~~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~ev--~~g~~~~~~~~~~~~~~~~i~~lf~~~g~~~~~ 273 (303)
.+++ .+.. .+.+.+.+... .+..+..|-+.... ..+.. .++.+++.+..+.++.+|+.- .+++.
T Consensus 123 ~st~-~~~~---------~~~~~~~~~~~--g~~~~~~pv~g~~~~a~~g~l-~i~~gg~~~~~~~~~~ll~~~-~~~~~ 188 (320)
T 4dll_A 123 MASI-TPRE---------ARDHAARLGAL--GIAHLDTPVSGGTVGAEQGTL-VIMAGGKPADFERSLPLLKVF-GRATH 188 (320)
T ss_dssp CSCC-CHHH---------HHHHHHHHHHT--TCEEEECCEECHHHHHHHTCE-EEEEESCHHHHHHHHHHHHHH-EEEEE
T ss_pred cCCC-CHHH---------HHHHHHHHHHc--CCEEEeCCCcCCHhHHhcCCe-eEEeCCCHHHHHHHHHHHHhc-CCEEE
Confidence 6643 2221 12222222110 12233445443322 23322 234466777788888888877 67777
Q ss_pred cCChhHHHHHHHHHHHH--HHHHHHHhhh
Q 022050 274 NGDLVTHEVMGGLKNVY--AIGAGTIYFL 300 (303)
Q Consensus 274 ~~Di~g~e~~~~lkNv~--Ai~~G~~~gl 300 (303)
..+.-..++.+.+-|.+ ...+++.+++
T Consensus 189 ~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~ 217 (320)
T 4dll_A 189 VGPHGSGQLTKLANQMIVGITIGAVAEAL 217 (320)
T ss_dssp EESTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eCCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777888999999984 3345555543
No 34
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.60 E-value=9.6e-15 Score=133.94 Aligned_cols=172 Identities=17% Similarity=0.168 Sum_probs=122.3
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhcC
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (303)
|||+|||+|.||..+|..|+.. | ++|.+|+|++++.+.+..
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~-g-----~~V~~~~~~~~~~~~~~~--------------------------------- 46 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKA-G-----YSLVVSDRNPEAIADVIA--------------------------------- 46 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-T-----CEEEEECSCHHHHHHHHH---------------------------------
T ss_pred ceEEEECchHHHHHHHHHHHhC-C-----CEEEEEeCCHHHHHHHHH---------------------------------
Confidence 7999999999999999999998 8 899999999876543210
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecC-chhHHHHH---HHHHHHhhccCCCCEEEEeecc
Q 022050 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLP-STETKEVF---EEISRYWKERITVPVIISLAKG 199 (303)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp-~~~~~~vl---~~l~~~l~~~~~~~iivs~~nG 199 (303)
..+..+++++++++++|+||+++| +..+++++ +++.+++++ +++|+++++|
T Consensus 47 ----------------------~g~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~~~~~~l~~~l~~---~~~vv~~s~~ 101 (299)
T 1vpd_A 47 ----------------------AGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGIIEGAKP---GTVLIDMSSI 101 (299)
T ss_dssp ----------------------TTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHCCT---TCEEEECSCC
T ss_pred ----------------------CCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHhCcchHhhcCCC---CCEEEECCCC
Confidence 023445678788889999999999 56788888 678888877 7889998887
Q ss_pred CccccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHHHh-ccCceEEEEeCChhhHHHHHHHhcCCCeEEEecCChh
Q 022050 200 VEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIY-NKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDLV 278 (303)
Q Consensus 200 i~~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~ev~-~g~~~~~~~~~~~~~~~~i~~lf~~~g~~~~~~~Di~ 278 (303)
.... .+.+.+.++... +.++..|-+..... ......++.+++.+..+.++++|+..|++++...|.-
T Consensus 102 ~~~~----------~~~l~~~~~~~g--~~~~~~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g~~~~~~~~~~ 169 (299)
T 1vpd_A 102 APLA----------SREISDALKAKG--VEMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGSVVHTGDIG 169 (299)
T ss_dssp CHHH----------HHHHHHHHHTTT--CEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHHHHHHTTEEEEEEEESTT
T ss_pred CHHH----------HHHHHHHHHHcC--CeEEEecCCCCHhHHhcCCEEEEeCCCHHHHHHHHHHHHHHcCCeEEeCCcC
Confidence 6432 123444443211 22233343322111 1112223345667788999999999999999888888
Q ss_pred HHHHHHHHHHHHH
Q 022050 279 THEVMGGLKNVYA 291 (303)
Q Consensus 279 g~e~~~~lkNv~A 291 (303)
...|.+.+-|.+.
T Consensus 170 ~~~~~Kl~~n~~~ 182 (299)
T 1vpd_A 170 AGNVTKLANQVIV 182 (299)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 8899999999765
No 35
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.59 E-value=4.9e-15 Score=136.50 Aligned_cols=173 Identities=15% Similarity=0.155 Sum_probs=121.0
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
.||||+|||+|.||.++|..|++. | ++|++|+|++++++++.+
T Consensus 2 ~m~~I~iiG~G~mG~~~a~~l~~~-G-----~~V~~~d~~~~~~~~~~~------------------------------- 44 (302)
T 2h78_A 2 HMKQIAFIGLGHMGAPMATNLLKA-G-----YLLNVFDLVQSAVDGLVA------------------------------- 44 (302)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHT-T-----CEEEEECSSHHHHHHHHH-------------------------------
T ss_pred CCCEEEEEeecHHHHHHHHHHHhC-C-----CeEEEEcCCHHHHHHHHH-------------------------------
Confidence 468999999999999999999999 8 899999999876543210
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCc-hhHHHHHH---HHHHHhhccCCCCEEEEee
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS-TETKEVFE---EISRYWKERITVPVIISLA 197 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~-~~~~~vl~---~l~~~l~~~~~~~iivs~~ 197 (303)
..+..+++++++++++|+||++||. ..+++++. ++.+.+.+ +++|++++
T Consensus 45 ------------------------~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~~~~~l~~---~~~vi~~s 97 (302)
T 2h78_A 45 ------------------------AGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGLLAHIAP---GTLVLECS 97 (302)
T ss_dssp ------------------------TTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSCGGGSSCS---SCEEEECS
T ss_pred ------------------------CCCeEcCCHHHHHhCCCeEEEECCCHHHHHHHHcCchhHHhcCCC---CcEEEECC
Confidence 0245667888889999999999984 57888888 78887776 77887765
Q ss_pred ccCccccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHHHh--ccCceEEEEeCChhhHHHHHHHhcCCCeEEEecC
Q 022050 198 KGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIY--NKEYANARICGAEKWRKPLAKFLRRPHFTVWDNG 275 (303)
Q Consensus 198 nGi~~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~ev~--~g~~~~~~~~~~~~~~~~i~~lf~~~g~~~~~~~ 275 (303)
++.... .+.+.+.+.... ..++..|.+..... .+.. ....+++.+..+.++++|+..+.+++...
T Consensus 98 t~~~~~----------~~~l~~~~~~~g--~~~~~~pv~~~~~~~~~g~l-~~~~~g~~~~~~~~~~ll~~~g~~~~~~~ 164 (302)
T 2h78_A 98 TIAPTS----------ARKIHAAARERG--LAMLDAPVSGGTAGAAAGTL-TFMVGGDAEALEKARPLFEAMGRNIFHAG 164 (302)
T ss_dssp CCCHHH----------HHHHHHHHHHTT--CCEEECCEESCHHHHHHTCE-EEEEESCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred CCCHHH----------HHHHHHHHHHcC--CEEEEEEccCChhhHhcCCc-eEEeCCCHHHHHHHHHHHHHhCCCeEEcC
Confidence 432221 122333332111 11233455543322 2321 22345677788999999998898888777
Q ss_pred ChhHHHHHHHHHHHHH
Q 022050 276 DLVTHEVMGGLKNVYA 291 (303)
Q Consensus 276 Di~g~e~~~~lkNv~A 291 (303)
+.-..+|.+..-|.+.
T Consensus 165 ~~~~~~~~Kl~~n~~~ 180 (302)
T 2h78_A 165 PDGAGQVAKVCNNQLL 180 (302)
T ss_dssp STTHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHH
Confidence 7888899999999874
No 36
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.59 E-value=5.9e-15 Score=135.27 Aligned_cols=180 Identities=14% Similarity=0.071 Sum_probs=124.3
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
||||+|||+|.||.++|..|+++ | ++|++|+|++++++.+.+
T Consensus 1 M~~I~iiG~G~mG~~~a~~l~~~-G-----~~V~~~dr~~~~~~~~~~-------------------------------- 42 (287)
T 3pdu_A 1 MTTYGFLGLGIMGGPMAANLVRA-G-----FDVTVWNRNPAKCAPLVA-------------------------------- 42 (287)
T ss_dssp CCCEEEECCSTTHHHHHHHHHHH-T-----CCEEEECSSGGGGHHHHH--------------------------------
T ss_pred CCeEEEEccCHHHHHHHHHHHHC-C-----CeEEEEcCCHHHHHHHHH--------------------------------
Confidence 57999999999999999999999 9 899999999987654211
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH---HHHHHHhhccCCCCEEEEeec
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF---EEISRYWKERITVPVIISLAK 198 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~-~~~~vl---~~l~~~l~~~~~~~iivs~~n 198 (303)
..+..+++++++++++|+||++||+. .+++++ +++.+.+.+ +++|+..++
T Consensus 43 -----------------------~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~~~~~l~~~l~~---g~~vv~~st 96 (287)
T 3pdu_A 43 -----------------------LGARQASSPAEVCAACDITIAMLADPAAAREVCFGANGVLEGIGG---GRGYIDMST 96 (287)
T ss_dssp -----------------------HTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCGGGTCCT---TCEEEECSC
T ss_pred -----------------------CCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHcCchhhhhcccC---CCEEEECCC
Confidence 02445678888889999999999986 788888 778877776 778876664
Q ss_pred cCccccccccccCCHHHHHHhHhCCCCccEEEEeCCCcH--HHHhccCceEEEEeCChhhHHHHHHHhcCCCeEEEecCC
Q 022050 199 GVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIA--SEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGD 276 (303)
Q Consensus 199 Gi~~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a--~ev~~g~~~~~~~~~~~~~~~~i~~lf~~~g~~~~~~~D 276 (303)
+ .+.. ...+.+.+.+ .+ +..+.+|.+. .....|... ++.+++.+..+.++.+|+.-+.+++...+
T Consensus 97 ~-~~~~-----~~~~~~~~~~-~g-----~~~~~~pv~g~~~~a~~g~l~-~~~gg~~~~~~~~~~ll~~~g~~~~~~g~ 163 (287)
T 3pdu_A 97 V-DDET-----STAIGAAVTA-RG-----GRFLEAPVSGTKKPAEDGTLI-ILAAGDQSLFTDAGPAFAALGKKCLHLGE 163 (287)
T ss_dssp C-CHHH-----HHHHHHHHHH-TT-----CEEEECCEECCHHHHHHTCEE-EEEEECHHHHHHTHHHHHHHEEEEEECSS
T ss_pred C-CHHH-----HHHHHHHHHH-cC-----CEEEECCccCCHHHHhcCCEE-EEEeCCHHHHHHHHHHHHHhCCCEEEcCC
Confidence 3 3221 1111222222 11 2233344332 222234322 23456677888999999988888888778
Q ss_pred hhHHHHHHHHHHHHH--HHHHHHhh
Q 022050 277 LVTHEVMGGLKNVYA--IGAGTIYF 299 (303)
Q Consensus 277 i~g~e~~~~lkNv~A--i~~G~~~g 299 (303)
.-..++.|..-|.+. +..++.+.
T Consensus 164 ~g~~~~~Kl~~N~~~~~~~~~~~Ea 188 (287)
T 3pdu_A 164 VGQGARMKLVVNMIMGQMMTALGEG 188 (287)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHH
Confidence 888899999999854 34455554
No 37
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=99.59 E-value=7.8e-15 Score=141.36 Aligned_cols=184 Identities=16% Similarity=0.099 Sum_probs=125.9
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhcC
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (303)
|||+|||+|+||..+|..|++ | ++|++|++++++++.++..++ +.+.+++.
T Consensus 1 MkI~VIG~G~vG~~~A~~La~--G-----~~V~~~d~~~~~~~~l~~~~~-----------------~i~e~~l~----- 51 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL--Q-----NEVTIVDILPSKVDKINNGLS-----------------PIQDEYIE----- 51 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT--T-----SEEEEECSCHHHHHHHHTTCC-----------------SSCCHHHH-----
T ss_pred CEEEEECCCHHHHHHHHHHhC--C-----CEEEEEECCHHHHHHHHcCCC-----------------CcCCCCHH-----
Confidence 799999999999999999986 5 899999999988776543221 11111111
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-----------hHHHHHHHHHHHhhccCCCCE
Q 022050 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-----------ETKEVFEEISRYWKERITVPV 192 (303)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~-----------~~~~vl~~l~~~l~~~~~~~i 192 (303)
+.++. ...++.+++++.++++++|+||+|||+. +++++++++.+ +.+ +++
T Consensus 52 ------~~~~~---------~~~~l~~t~~~~~~~~~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~---~~i 112 (402)
T 1dlj_A 52 ------YYLKS---------KQLSIKATLDSKAAYKEAELVIIATPTNYNSRINYFDTQHVETVIKEVLS-VNS---HAT 112 (402)
T ss_dssp ------HHHHH---------SCCCEEEESCHHHHHHHCSEEEECCCCCEETTTTEECCHHHHHHHHHHHH-HCS---SCE
T ss_pred ------HHHHh---------ccCcEEEeCCHHHHhcCCCEEEEecCCCcccCCCCccHHHHHHHHHHHHh-hCC---CCE
Confidence 00000 0014678889888889999999999997 59999999999 877 677
Q ss_pred EEE-eeccCccccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHHHhc----cCceEEEEeCCh-------hhHHHH
Q 022050 193 IIS-LAKGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYN----KEYANARICGAE-------KWRKPL 260 (303)
Q Consensus 193 ivs-~~nGi~~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~ev~~----g~~~~~~~~~~~-------~~~~~i 260 (303)
||. .+++.... +.+.+.++.. .+.++|.+..+... ..+..++++.+. +.++.+
T Consensus 113 VV~~ST~~~g~~-----------~~l~~~~~~~----~v~~~Pe~~~~G~a~~~~~~~~riviG~~~~~~~~~~~~~~~~ 177 (402)
T 1dlj_A 113 LIIKSTIPIGFI-----------TEMRQKFQTD----RIIFSPEFLRESKALYDNLYPSRIIVSCEENDSPKVKADAEKF 177 (402)
T ss_dssp EEECSCCCTTHH-----------HHHHHHTTCS----CEEECCCCCCTTSTTHHHHSCSCEEEECCTTSCHHHHHHHHHH
T ss_pred EEEeCCCCccHH-----------HHHHHHhCCC----eEEECCccccCcchhhcccCCCEEEEeCCCcccchhHHHHHHH
Confidence 765 56555432 3455666532 35577876543221 112234444433 566888
Q ss_pred HHHhcCCCeE---EEecCChhHHHHHHHHHHHH
Q 022050 261 AKFLRRPHFT---VWDNGDLVTHEVMGGLKNVY 290 (303)
Q Consensus 261 ~~lf~~~g~~---~~~~~Di~g~e~~~~lkNv~ 290 (303)
.++|...+++ ++...|+...||.|.+.|.+
T Consensus 178 ~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~ 210 (402)
T 1dlj_A 178 ALLLKSAAKKNNVPVLIMGASEAEAVKLFANTY 210 (402)
T ss_dssp HHHHHHHCSCSCCCEEEECHHHHHHHHHHHHHH
T ss_pred HHHHhhhhccCCceEEecChHHHHHHHHHHHHH
Confidence 8888765554 56677899999999999986
No 38
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.59 E-value=1.3e-14 Score=131.13 Aligned_cols=178 Identities=13% Similarity=0.040 Sum_probs=119.6
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCee-EEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~-V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
.|||+|||+|.||..+|..|++. | ++ |.+|+|++++++++.. .
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~-g-----~~~v~~~~~~~~~~~~~~~-------------------------~----- 53 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRK-G-----FRIVQVYSRTEESARELAQ-------------------------K----- 53 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHH-T-----CCEEEEECSSHHHHHHHHH-------------------------H-----
T ss_pred CCeEEEEcCCHHHHHHHHHHHHC-C-----CeEEEEEeCCHHHHHHHHH-------------------------H-----
Confidence 47999999999999999999998 8 77 8999999876543210 0
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeeccCc
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nGi~ 201 (303)
.++..+++++++++++|+||+++|+...+++++++.+.+++ +++|+++++|+.
T Consensus 54 ------------------------~g~~~~~~~~~~~~~~Dvvi~av~~~~~~~v~~~l~~~~~~---~~ivv~~s~~~~ 106 (266)
T 3d1l_A 54 ------------------------VEAEYTTDLAEVNPYAKLYIVSLKDSAFAELLQGIVEGKRE---EALMVHTAGSIP 106 (266)
T ss_dssp ------------------------TTCEEESCGGGSCSCCSEEEECCCHHHHHHHHHHHHTTCCT---TCEEEECCTTSC
T ss_pred ------------------------cCCceeCCHHHHhcCCCEEEEecCHHHHHHHHHHHHhhcCC---CcEEEECCCCCc
Confidence 02445667777788999999999999999999999888876 789999999988
Q ss_pred cccccccccCCHHHHHHhHhCCCC--ccEEEEeCCCcHHHHhccCceEEEEeCChhhHHHHHHHhcCCCeEEEecCChh-
Q 022050 202 AELEAVPRIITPTQMINRATGVPI--ENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDLV- 278 (303)
Q Consensus 202 ~~~~~~~~~~~~~~~i~~~l~~~~--~~~~v~~GP~~a~ev~~g~~~~~~~~~~~~~~~~i~~lf~~~g~~~~~~~Di~- 278 (303)
.+. +.+.++.+. ++...++|+.. ....+ ...++.+.+.+..+.++++|+..|++++..++.-
T Consensus 107 ~~~------------l~~~~~~~~~~~~~~~~~g~~~--~~~~~-~~~~v~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~ 171 (266)
T 3d1l_A 107 MNV------------WEGHVPHYGVFYPMQTFSKQRE--VDFKE-IPFFIEASSTEDAAFLKAIASTLSNRVYDADSEQR 171 (266)
T ss_dssp GGG------------STTTCSSEEEEEECCCC---CC--CCCTT-CCEEEEESSHHHHHHHHHHHHTTCSCEEECCHHHH
T ss_pred hHH------------HHHHHHhccCcCCceecCCCch--hhcCC-CeEEEecCCHHHHHHHHHHHHhcCCcEEEeCHHHH
Confidence 652 233332110 11111123222 11122 2222335667778999999999998887766542
Q ss_pred --HHHHHHHHHHHHHHHHHHHh
Q 022050 279 --THEVMGGLKNVYAIGAGTIY 298 (303)
Q Consensus 279 --g~e~~~~lkNv~Ai~~G~~~ 298 (303)
...+.+..-|..+....+++
T Consensus 172 ~~~~~~~~l~~~~~~~~~~~~e 193 (266)
T 3d1l_A 172 KSLHLAAVFTCNFTNHMYALAA 193 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 44666666665444444433
No 39
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.58 E-value=1.3e-14 Score=132.87 Aligned_cols=182 Identities=14% Similarity=0.075 Sum_probs=123.9
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
.|||+|||+|.||.++|..|+++ | ++|++|+|++++++++.+
T Consensus 1 s~~i~iIG~G~mG~~~a~~l~~~-G-----~~V~~~dr~~~~~~~~~~-------------------------------- 42 (287)
T 3pef_A 1 SQKFGFIGLGIMGSAMAKNLVKA-G-----CSVTIWNRSPEKAEELAA-------------------------------- 42 (287)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSGGGGHHHHH--------------------------------
T ss_pred CCEEEEEeecHHHHHHHHHHHHC-C-----CeEEEEcCCHHHHHHHHH--------------------------------
Confidence 38999999999999999999999 8 999999999887653210
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecC-chhHHHHH---HHHHHHhhccCCCCEEEEeec
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLP-STETKEVF---EEISRYWKERITVPVIISLAK 198 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp-~~~~~~vl---~~l~~~l~~~~~~~iivs~~n 198 (303)
.++..+++++++++++|+||++|| +..+++++ +++.+.+++ +++|++.+
T Consensus 43 -----------------------~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~---~~~vi~~s- 95 (287)
T 3pef_A 43 -----------------------LGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHGVLEGIGE---GRGYVDMS- 95 (287)
T ss_dssp -----------------------TTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHCCT---TCEEEECS-
T ss_pred -----------------------CCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcchHhhcCCC---CCEEEeCC-
Confidence 034566788888899999999999 56889998 888888877 77777664
Q ss_pred cCccccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHHHhccCceEEEEeCChhhHHHHHHHhcCCCeEEEecCChh
Q 022050 199 GVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDLV 278 (303)
Q Consensus 199 Gi~~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~ev~~g~~~~~~~~~~~~~~~~i~~lf~~~g~~~~~~~Di~ 278 (303)
++.+.. ...+.+.+.+. +......-+..+|..+ ..+.. .++.+++.+..+.++.+|+.-+.+++...+.-
T Consensus 96 t~~~~~-----~~~~~~~~~~~-g~~~~~~pv~g~~~~a---~~g~l-~~~~gg~~~~~~~~~~ll~~~g~~~~~~g~~g 165 (287)
T 3pef_A 96 TVDPAT-----SQRIGVAVVAK-GGRFLEAPVSGSKKPA---EDGTL-IILAAGDRNLYDEAMPGFEKMGKKIIHLGDVG 165 (287)
T ss_dssp CCCHHH-----HHHHHHHHHHT-TCEEEECCEECCHHHH---HHTCE-EEEEEECHHHHHHHHHHHHHHEEEEEECSSTT
T ss_pred CCCHHH-----HHHHHHHHHHh-CCEEEECCCcCCHHHH---hcCCE-EEEEeCCHHHHHHHHHHHHHhCCCeEEeCCCC
Confidence 444431 11122222221 2100000122333332 23322 23345567778899999998888888887888
Q ss_pred HHHHHHHHHHHHH--HHHHHHhh
Q 022050 279 THEVMGGLKNVYA--IGAGTIYF 299 (303)
Q Consensus 279 g~e~~~~lkNv~A--i~~G~~~g 299 (303)
..++.+..-|.+. ...++.+.
T Consensus 166 ~~~~~Kl~~N~~~~~~~~~~~E~ 188 (287)
T 3pef_A 166 KGAEMKLVVNMVMGGMMACFCEG 188 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999863 34445443
No 40
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.58 E-value=1.3e-14 Score=134.78 Aligned_cols=185 Identities=15% Similarity=0.120 Sum_probs=125.4
Q ss_pred CCCCCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhh
Q 022050 39 AEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVE 118 (303)
Q Consensus 39 ~~~~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~ 118 (303)
....+|||+|||+|.||.++|..|+++ | ++|++|+|++++++++.+
T Consensus 17 ~~~~m~~I~iIG~G~mG~~~A~~l~~~-G-----~~V~~~dr~~~~~~~l~~---------------------------- 62 (310)
T 3doj_A 17 RGSHMMEVGFLGLGIMGKAMSMNLLKN-G-----FKVTVWNRTLSKCDELVE---------------------------- 62 (310)
T ss_dssp -CCCSCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSGGGGHHHHH----------------------------
T ss_pred ccccCCEEEEECccHHHHHHHHHHHHC-C-----CeEEEEeCCHHHHHHHHH----------------------------
Confidence 344579999999999999999999999 9 899999999887653210
Q ss_pred hhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCc-hhHHHHH---HHHHHHhhccCCCCEEE
Q 022050 119 ARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS-TETKEVF---EEISRYWKERITVPVII 194 (303)
Q Consensus 119 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~-~~~~~vl---~~l~~~l~~~~~~~iiv 194 (303)
..+..++++.++++++|+||++||. ..+++++ +++.+.+.+ +++||
T Consensus 63 ---------------------------~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~---g~~vv 112 (310)
T 3doj_A 63 ---------------------------HGASVCESPAEVIKKCKYTIAMLSDPCAALSVVFDKGGVLEQICE---GKGYI 112 (310)
T ss_dssp ---------------------------TTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCGGGGCCT---TCEEE
T ss_pred ---------------------------CCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHHhCchhhhhccCC---CCEEE
Confidence 0345667888889999999999987 4788888 778777776 77777
Q ss_pred EeeccCccccccccccCCHHHHHHhHhCCCCccEEEEeCCCc--HHHHhccCceEEEEeCChhhHHHHHHHhcCCCeEEE
Q 022050 195 SLAKGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNI--ASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVW 272 (303)
Q Consensus 195 s~~nGi~~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~--a~ev~~g~~~~~~~~~~~~~~~~i~~lf~~~g~~~~ 272 (303)
.++ ++.+.. ...+.+.+.+. +. ..+..|-. +.....+... ++.+++.+..+.++.+|+.-+.+++
T Consensus 113 ~~s-t~~~~~-----~~~~~~~~~~~-g~-----~~v~~pv~g~~~~a~~g~l~-i~~gg~~~~~~~~~~ll~~~g~~~~ 179 (310)
T 3doj_A 113 DMS-TVDAET-----SLKINEAITGK-GG-----RFVEGPVSGSKKPAEDGQLI-ILAAGDKALFEESIPAFDVLGKRSF 179 (310)
T ss_dssp ECS-CCCHHH-----HHHHHHHHHHT-TC-----EEEECCEECCHHHHHHTCEE-EEEEECHHHHHHHHHHHHHHEEEEE
T ss_pred ECC-CCCHHH-----HHHHHHHHHHc-CC-----EEEeCCCCCChhHHhcCCeE-EEEcCCHHHHHHHHHHHHHhCCCEE
Confidence 665 333321 11122222221 21 12222322 1112234322 3345567788899999988888888
Q ss_pred ecCChhHHHHHHHHHHHH--HHHHHHHhhh
Q 022050 273 DNGDLVTHEVMGGLKNVY--AIGAGTIYFL 300 (303)
Q Consensus 273 ~~~Di~g~e~~~~lkNv~--Ai~~G~~~gl 300 (303)
...+.-..++.+.+-|.+ ...+++.+.+
T Consensus 180 ~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~ 209 (310)
T 3doj_A 180 YLGQVGNGAKMKLIVNMIMGSMMNAFSEGL 209 (310)
T ss_dssp ECSSTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888889999999987 3445555543
No 41
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=99.58 E-value=8.9e-15 Score=131.77 Aligned_cols=152 Identities=18% Similarity=0.238 Sum_probs=111.3
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhcC
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (303)
|||+|||+|+||+++|..|+++ |. ++|++|+|++++++++..+
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~-g~----~~v~~~~r~~~~~~~~~~~-------------------------------- 43 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQ-GG----YRIYIANRGAEKRERLEKE-------------------------------- 43 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-CS----CEEEEECSSHHHHHHHHHH--------------------------------
T ss_pred CEEEEECchHHHHHHHHHHHHC-CC----CeEEEECCCHHHHHHHHHh--------------------------------
Confidence 7999999999999999999998 62 5899999998765432100
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeeccCccc
Q 022050 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEAE 203 (303)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nGi~~~ 203 (303)
.++.+++++.+++ ++|+||++||++.++++++++.+ + +++|+++++|+.++
T Consensus 44 ----------------------~g~~~~~~~~~~~-~~D~vi~~v~~~~~~~v~~~l~~---~---~~ivv~~~~g~~~~ 94 (263)
T 1yqg_A 44 ----------------------LGVETSATLPELH-SDDVLILAVKPQDMEAACKNIRT---N---GALVLSVAAGLSVG 94 (263)
T ss_dssp ----------------------TCCEEESSCCCCC-TTSEEEECSCHHHHHHHHTTCCC---T---TCEEEECCTTCCHH
T ss_pred ----------------------cCCEEeCCHHHHh-cCCEEEEEeCchhHHHHHHHhcc---C---CCEEEEecCCCCHH
Confidence 0233455666667 99999999999999999887654 2 57899999998763
Q ss_pred cccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHHHhccCceEEEEeC--ChhhHHHHHHHhcCCCeEEEec-CC
Q 022050 204 LEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICG--AEKWRKPLAKFLRRPHFTVWDN-GD 276 (303)
Q Consensus 204 ~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~ev~~g~~~~~~~~~--~~~~~~~i~~lf~~~g~~~~~~-~D 276 (303)
.+.+.++.+ .++ +..+|+++..+..|.+. +..+. +.+..+.++++|+..|++++.. +|
T Consensus 95 ------------~l~~~~~~~-~~~-v~~~~~~~~~~~~g~~~-i~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~ 155 (263)
T 1yqg_A 95 ------------TLSRYLGGT-RRI-VRVMPNTPGKIGLGVSG-MYAEAEVSETDRRIADRIMKSVGLTVWLDDEE 155 (263)
T ss_dssp ------------HHHHHTTSC-CCE-EEEECCGGGGGTCEEEE-EECCTTSCHHHHHHHHHHHHTTEEEEECSSTT
T ss_pred ------------HHHHHcCCC-CcE-EEEcCCHHHHHcCceEE-EEcCCCCCHHHHHHHHHHHHhCCCEEEeCChh
Confidence 366666542 123 33479998877776432 22233 5567899999999999998776 54
No 42
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=99.57 E-value=5.6e-14 Score=131.63 Aligned_cols=184 Identities=15% Similarity=0.154 Sum_probs=120.0
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
.++||+|||+|.||++||..|+++ | ++|++||++++.++++... +... +.++.+.. ++++
T Consensus 5 ~~~kI~vIGaG~MG~~iA~~la~~-G-----~~V~l~d~~~~~~~~~~~~-----i~~~---l~~l~~~G-~~~g----- 64 (319)
T 2dpo_A 5 AAGDVLIVGSGLVGRSWAMLFASG-G-----FRVKLYDIEPRQITGALEN-----IRKE---MKSLQQSG-SLKG----- 64 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSCHHHHHHHHHH-----HHHH---HHHHHHTT-CCCS-----
T ss_pred CCceEEEEeeCHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHHHHHH-----HHHH---HHHHHHcC-cccc-----
Confidence 468999999999999999999999 9 8999999999887764321 1110 00000000 0000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch--hHHHHHHHHHHHhhccCCCCEEEEeecc
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST--ETKEVFEEISRYWKERITVPVIISLAKG 199 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~--~~~~vl~~l~~~l~~~~~~~iivs~~nG 199 (303)
.+.+++ . +.++++++|+++++++||+||+|||+. .++++++++.+++++ +++|+|+++|
T Consensus 65 ---~~~~~~-~------------~~~i~~~~~~~eav~~aDlVieavpe~~~~k~~v~~~l~~~~~~---~~Ii~s~tS~ 125 (319)
T 2dpo_A 65 ---SLSAEE-Q------------LSLISSCTNLAEAVEGVVHIQECVPENLDLKRKIFAQLDSIVDD---RVVLSSSSSC 125 (319)
T ss_dssp ---SSCHHH-H------------HHTEEEECCHHHHTTTEEEEEECCCSCHHHHHHHHHHHHTTCCS---SSEEEECCSS
T ss_pred ---ccchHH-H------------hhceEEeCCHHHHHhcCCEEEEeccCCHHHHHHHHHHHHhhCCC---CeEEEEeCCC
Confidence 000000 0 125788999999999999999999985 578899999999888 8899999988
Q ss_pred CccccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHHHhccCceEEEEe--CChhhHHHHHHHhcCCCeEEEec-CC
Q 022050 200 VEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARIC--GAEKWRKPLAKFLRRPHFTVWDN-GD 276 (303)
Q Consensus 200 i~~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~ev~~g~~~~~~~~--~~~~~~~~i~~lf~~~g~~~~~~-~D 276 (303)
+... .+.+.+..+. + .+...|..+... +....++.+ .+.+..+.+..+|+.-|..++.. .|
T Consensus 126 i~~~------------~la~~~~~~~-r-~ig~Hp~~P~~~--~~lveiv~g~~t~~e~~~~~~~l~~~lGk~~v~v~~~ 189 (319)
T 2dpo_A 126 LLPS------------KLFTGLAHVK-Q-CIVAHPVNPPYY--IPLVELVPHPETSPATVDRTHALMRKIGQSPVRVLKE 189 (319)
T ss_dssp CCHH------------HHHTTCTTGG-G-EEEEEECSSTTT--CCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEECSSC
T ss_pred hHHH------------HHHHhcCCCC-C-eEEeecCCchhh--cceEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEECCC
Confidence 7654 2555554331 2 233344443322 112223333 45678899999999988877664 56
Q ss_pred hhHH
Q 022050 277 LVTH 280 (303)
Q Consensus 277 i~g~ 280 (303)
..|.
T Consensus 190 ~~Gf 193 (319)
T 2dpo_A 190 IDGF 193 (319)
T ss_dssp CTTT
T ss_pred cCCc
Confidence 6664
No 43
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.57 E-value=1.1e-14 Score=134.68 Aligned_cols=182 Identities=14% Similarity=0.046 Sum_probs=121.7
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
.+|||+|||+|.||+++|..|+++ | ++|++|+|++++++.+.+. +
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~-G-----~~V~~~dr~~~~~~~~~~~------------------------g----- 50 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRA-G-----LSTWGADLNPQACANLLAE------------------------G----- 50 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHHHHHHHT------------------------T-----
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC-C-----CeEEEEECCHHHHHHHHHc------------------------C-----
Confidence 458999999999999999999999 9 8999999998766542110 0
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH---HHHHHHhhccCCCCEEEEee
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF---EEISRYWKERITVPVIISLA 197 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~-~~~~vl---~~l~~~l~~~~~~~iivs~~ 197 (303)
...+++++++++++||+||++||+. .+++++ +++.+.+++ +++||..+
T Consensus 51 -------------------------~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~---g~ivv~~s 102 (303)
T 3g0o_A 51 -------------------------ACGAAASAREFAGVVDALVILVVNAAQVRQVLFGEDGVAHLMKP---GSAVMVSS 102 (303)
T ss_dssp -------------------------CSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC--CCCGGGSCT---TCEEEECS
T ss_pred -------------------------CccccCCHHHHHhcCCEEEEECCCHHHHHHHHhChhhHHhhCCC---CCEEEecC
Confidence 0112567778889999999999985 688887 778887876 77887665
Q ss_pred ccCccccccccccCCHHHHHHhHhCCCCccEEEEeCCCc--HHHHhccCceEEEEeCChhhHHHHHHHhcCCCeEEEecC
Q 022050 198 KGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNI--ASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNG 275 (303)
Q Consensus 198 nGi~~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~--a~ev~~g~~~~~~~~~~~~~~~~i~~lf~~~g~~~~~~~ 275 (303)
+. .+.. .+.+.+.+.... +..+..|-+ +.....+.. .++.+++.+..+.++.+|+.-+.+++...
T Consensus 103 t~-~~~~---------~~~~~~~~~~~g--~~~~~~pv~g~~~~a~~g~l-~~~~gg~~~~~~~~~~ll~~~g~~~~~~~ 169 (303)
T 3g0o_A 103 TI-SSAD---------AQEIAAALTALN--LNMLDAPVSGGAVKAAQGEM-TVMASGSEAAFTRLKPVLDAVASNVYRIS 169 (303)
T ss_dssp CC-CHHH---------HHHHHHHHHTTT--CEEEECCEESCHHHHHTTCE-EEEEECCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred CC-CHHH---------HHHHHHHHHHcC--CeEEeCCCCCChhhhhcCCe-EEEeCCCHHHHHHHHHHHHHHCCCEEECC
Confidence 43 3321 122333321111 122234432 222223332 23345677788999999998888877666
Q ss_pred C-hhHHHHHHHHHHHHH--HHHHHHhh
Q 022050 276 D-LVTHEVMGGLKNVYA--IGAGTIYF 299 (303)
Q Consensus 276 D-i~g~e~~~~lkNv~A--i~~G~~~g 299 (303)
+ +-..++.|..-|.+. ..+++.+.
T Consensus 170 ~~~g~a~~~Kl~~N~~~~~~~~~~~Ea 196 (303)
T 3g0o_A 170 DTPGAGSTVKIIHQLLAGVHIAAAAEA 196 (303)
T ss_dssp SSTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5 777899999999874 34555554
No 44
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.57 E-value=2.6e-14 Score=132.42 Aligned_cols=171 Identities=13% Similarity=0.086 Sum_probs=116.6
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
+|||+|||+|.||+++|..|++. | ++|++|+|++++++++.+
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~-g-----~~V~~~~~~~~~~~~~~~-------------------------------- 71 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKM-G-----HTVTVWNRTAEKCDLFIQ-------------------------------- 71 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSGGGGHHHHH--------------------------------
T ss_pred CCeEEEEcccHHHHHHHHHHHhC-C-----CEEEEEeCCHHHHHHHHH--------------------------------
Confidence 48999999999999999999998 8 899999999876543210
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecC-chhHHHHHHHHH---HHhhccCCCCEEEEeec
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLP-STETKEVFEEIS---RYWKERITVPVIISLAK 198 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp-~~~~~~vl~~l~---~~l~~~~~~~iivs~~n 198 (303)
..+..++++.++++++|+||++|| +..+++++.++. +.+.+ +++|+++++
T Consensus 72 -----------------------~g~~~~~~~~~~~~~~DvVi~av~~~~~~~~v~~~~~~~~~~l~~---~~~vv~~s~ 125 (316)
T 2uyy_A 72 -----------------------EGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGVLQGIRP---GKCYVDMST 125 (316)
T ss_dssp -----------------------TTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCGGGGCCT---TCEEEECSC
T ss_pred -----------------------cCCEEcCCHHHHHhcCCEEEEeCCCHHHHHHHHcCchhHhhcCCC---CCEEEECCC
Confidence 023345677777889999999999 678888887654 55555 788888876
Q ss_pred cCccccccccccCCHHHHHHhHhCCCCccEEEEeCCCc--HHHHhccCceEEEEeCChhhHHHHHHHhcCCCeEEEecCC
Q 022050 199 GVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNI--ASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGD 276 (303)
Q Consensus 199 Gi~~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~--a~ev~~g~~~~~~~~~~~~~~~~i~~lf~~~g~~~~~~~D 276 (303)
+.... .+.+.+.++.. ...++.+|.+ +.....+.... +.+++.+..+.++++|+..|++++...|
T Consensus 126 ~~~~~----------~~~l~~~~~~~--~~~~v~~p~~g~~~~~~~g~~~~-~~~g~~~~~~~v~~ll~~~g~~~~~~~~ 192 (316)
T 2uyy_A 126 VDADT----------VTELAQVIVSR--GGRFLEAPVSGNQQLSNDGMLVI-LAAGDRGLYEDCSSCFQAMGKTSFFLGE 192 (316)
T ss_dssp CCHHH----------HHHHHHHHHHT--TCEEEECCEESCHHHHHHTCEEE-EEEECHHHHHHTHHHHHHHEEEEEECSS
T ss_pred CCHHH----------HHHHHHHHHHc--CCEEEEcCccCChhHHhhCCEEE-EeCCCHHHHHHHHHHHHHhcCCEEEeCC
Confidence 43221 12234443211 1233444433 33344443332 3344566788899999999999988878
Q ss_pred hhHHHHHHHHHHHH
Q 022050 277 LVTHEVMGGLKNVY 290 (303)
Q Consensus 277 i~g~e~~~~lkNv~ 290 (303)
+-..+|.+.+-|.+
T Consensus 193 ~~~~~~~K~~~n~~ 206 (316)
T 2uyy_A 193 VGNAAKMMLIVNMV 206 (316)
T ss_dssp TTHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 76666777776665
No 45
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.56 E-value=1.1e-13 Score=128.75 Aligned_cols=180 Identities=9% Similarity=0.059 Sum_probs=121.3
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCe-eEEEEecCC--chhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPG--RSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVE 118 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~-~V~l~~r~~--~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~ 118 (303)
.+|||+|||+|.||.++|..|+++ | + +|++|+|++ +..+.+ ..
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~-G-----~~~V~~~dr~~~~~~~~~~--------------------------~~-- 68 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQA-G-----AIDMAAYDAASAESWRPRA--------------------------EE-- 68 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHH-S-----CCEEEEECSSCHHHHHHHH--------------------------HH--
T ss_pred CCCEEEEECccHHHHHHHHHHHHC-C-----CCeEEEEcCCCCHHHHHHH--------------------------HH--
Confidence 468999999999999999999999 9 8 999999974 433211 00
Q ss_pred hhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeec
Q 022050 119 ARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (303)
Q Consensus 119 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~n 198 (303)
.++..++++.+++++||+||++||+....++++++.+++++ +++||.++
T Consensus 69 ---------------------------~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~~~~l~~~l~~---~~ivvd~s- 117 (312)
T 3qsg_A 69 ---------------------------LGVSCKASVAEVAGECDVIFSLVTAQAALEVAQQAGPHLCE---GALYADFT- 117 (312)
T ss_dssp ---------------------------TTCEECSCHHHHHHHCSEEEECSCTTTHHHHHHHHGGGCCT---TCEEEECC-
T ss_pred ---------------------------CCCEEeCCHHHHHhcCCEEEEecCchhHHHHHHhhHhhcCC---CCEEEEcC-
Confidence 13456678888889999999999999988899999988877 77877665
Q ss_pred cCccccccccccCCHHHHHHhHh-CCCCccE-EEEeCCCcHHHHhccCceEEEEeCChhhHHHHHHHhcCCCeEEEecCC
Q 022050 199 GVEAELEAVPRIITPTQMINRAT-GVPIENI-LYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGD 276 (303)
Q Consensus 199 Gi~~~~~~~~~~~~~~~~i~~~l-~~~~~~~-~v~~GP~~a~ev~~g~~~~~~~~~~~~~~~~i~~lf~~~g~~~~~~~D 276 (303)
++.+.+ .....+.+.+.. +. +.+ .-++||..+. .+... ++++++.. +.++.+|+.-+.+++...+
T Consensus 118 t~~~~~-----~~~~~~~~~~~~~g~--~~vd~pv~g~~~~~---~g~l~-i~vgg~~~--~~~~~ll~~~g~~~~~~g~ 184 (312)
T 3qsg_A 118 SCSPAV-----KRAIGDVISRHRPSA--QYAAVAVMSAVKPH---GHRVP-LVVDGDGA--RRFQAAFTLYGCRIEVLDG 184 (312)
T ss_dssp CCCHHH-----HHHHHHHHHHHCTTC--EEEEEEECSCSTTT---GGGSE-EEEESTTH--HHHHHHHHTTTCEEEECCS
T ss_pred CCCHHH-----HHHHHHHHHhhcCCC--eEEeccccCCchhh---cCCEE-EEecCChH--HHHHHHHHHhCCCeEEcCC
Confidence 333321 112222333322 21 111 2356654432 33332 23344433 8889999999998887776
Q ss_pred -hhHHHHHHHHHHHHH--HHHHHHhh
Q 022050 277 -LVTHEVMGGLKNVYA--IGAGTIYF 299 (303)
Q Consensus 277 -i~g~e~~~~lkNv~A--i~~G~~~g 299 (303)
+-..++.+..-|.+. ..+++.+.
T Consensus 185 ~~g~a~~~Kl~~n~~~~~~~~~~~Ea 210 (312)
T 3qsg_A 185 EVGGAALLKMCRSAVLKGLEALFLEA 210 (312)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888999999999764 23444443
No 46
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=99.56 E-value=2.8e-14 Score=133.70 Aligned_cols=185 Identities=16% Similarity=0.178 Sum_probs=117.1
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
+|||+|||+|+||+.+|..|+++ | ++|++|+|++++++++++++ ..++.+.
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~-g-----~~V~~~~r~~~~~~~~~~~~------------------~~~~~~~----- 54 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALK-G-----QSVLAWDIDAQRIKEIQDRG------------------AIIAEGP----- 54 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHHHHHHHHT------------------SEEEESS-----
T ss_pred cCeEEEECCCHHHHHHHHHHHhC-C-----CEEEEEeCCHHHHHHHHhcC------------------CeEEecc-----
Confidence 38999999999999999999998 8 89999999988766533210 0111110
Q ss_pred CCcccchhhhhccccccCCCCCCCCe-EEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeeccCc
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPL-KVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i-~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nGi~ 201 (303)
.+. . ...+ .++++++++++++|+||++||+...+++++++.+++++ +++|++. +|+.
T Consensus 55 --~~~-------~---------~~~~~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~~l~~~l~~---~~~vv~~-~~~~ 112 (359)
T 1bg6_A 55 --GLA-------G---------TAHPDLLTSDIGLAVKDADVILIVVPAIHHASIAANIASYISE---GQLIILN-PGAT 112 (359)
T ss_dssp --SCC-------E---------EECCSEEESCHHHHHTTCSEEEECSCGGGHHHHHHHHGGGCCT---TCEEEES-SCCS
T ss_pred --ccc-------c---------ccccceecCCHHHHHhcCCEEEEeCCchHHHHHHHHHHHhCCC---CCEEEEc-CCCc
Confidence 000 0 0123 46678888888999999999999999999999998887 7888877 5543
Q ss_pred cccccccccCCHHHHHHhH------h-CCCCccEE-EEeCCCcHHHHh-ccCceEEEE-e-CChhhHHHHHHHhcCCCeE
Q 022050 202 AELEAVPRIITPTQMINRA------T-GVPIENIL-YLGGPNIASEIY-NKEYANARI-C-GAEKWRKPLAKFLRRPHFT 270 (303)
Q Consensus 202 ~~~~~~~~~~~~~~~i~~~------l-~~~~~~~~-v~~GP~~a~ev~-~g~~~~~~~-~-~~~~~~~~i~~lf~~~g~~ 270 (303)
... .. ..+.+.+. + +....++. .+.||+++.... .+....... . .+.+..+.++++|.. +.
T Consensus 113 ~~~-----~~-~~~~l~~~~~~~v~~~~~~~~~~~~~~~gpg~v~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~--~~ 184 (359)
T 1bg6_A 113 GGA-----LE-FRKILRENGAPEVTIGETSSMLFTCRSERPGQVTVNAIKGAMDFACLPAAKAGWALEQIGSVLPQ--YV 184 (359)
T ss_dssp SHH-----HH-HHHHHHHTTCCCCEEEEESSCSEEEECSSTTEEEEEEECSCEEEEEESGGGHHHHHHHHTTTCTT--EE
T ss_pred hHH-----HH-HHHHHHhcCCCCeEEEEecCCcEEEEeCCCCEEEEEEeecceEEEeccccccHHHHHHHHHHhhh--cE
Confidence 321 01 12333321 1 00112333 346777655332 122222222 1 223356778888853 43
Q ss_pred EEecCChhHHHHHHHHHHHHHH
Q 022050 271 VWDNGDLVTHEVMGGLKNVYAI 292 (303)
Q Consensus 271 ~~~~~Di~g~e~~~~lkNv~Ai 292 (303)
.++|+ |.+++||+.|+
T Consensus 185 --~~~di----~~k~~~nvn~~ 200 (359)
T 1bg6_A 185 --AVENV----LHTSLTNVNAV 200 (359)
T ss_dssp --ECSCH----HHHHHCCHHHH
T ss_pred --EcCCh----HhhhccCCCcc
Confidence 46775 99999998887
No 47
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=99.55 E-value=5.9e-14 Score=136.40 Aligned_cols=187 Identities=16% Similarity=0.168 Sum_probs=128.3
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
.+|||+|||+|.||..+|..|++ | ++|++||+++++++.++.. .++.+.++++.
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~--G-----~~V~~~D~~~~~v~~l~~g-----------------~~~i~e~~l~~-- 88 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ--N-----HEVVALDIVQAKVDMLNQK-----------------ISPIVDKEIQE-- 88 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT--T-----SEEEEECSCHHHHHHHHTT-----------------CCSSCCHHHHH--
T ss_pred CCCEEEEECcCHHHHHHHHHHHc--C-----CeEEEEecCHHHhhHHhcc-----------------CCccccccHHH--
Confidence 46899999999999999999985 6 8999999999988765432 12334444321
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-----------hHHHHHHHHHHHhhccCCC
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-----------ETKEVFEEISRYWKERITV 190 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~-----------~~~~vl~~l~~~l~~~~~~ 190 (303)
++..+ ..++++++|+++++++||+||++||+. +++++++.+.+ +++ +
T Consensus 89 ---------ll~~~---------~~~l~~ttd~~ea~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~---g 146 (432)
T 3pid_A 89 ---------YLAEK---------PLNFRATTDKHDAYRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INP---N 146 (432)
T ss_dssp ---------HHHHS---------CCCEEEESCHHHHHTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCT---T
T ss_pred ---------HHhhc---------cCCeEEEcCHHHHHhCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCC---C
Confidence 11100 025889999999999999999999986 58889999999 877 6
Q ss_pred CEEEEeeccCccccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHHHhc----cCceEEEEeCChhhHHHHHHHhcC
Q 022050 191 PVIISLAKGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYN----KEYANARICGAEKWRKPLAKFLRR 266 (303)
Q Consensus 191 ~iivs~~nGi~~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~ev~~----g~~~~~~~~~~~~~~~~i~~lf~~ 266 (303)
++|| ..+++.+.+ .+.+.+.+... .+.+.|.+..+... -.|..++++.+.+.++.+..+|..
T Consensus 147 ~iVV-~~STv~pgt---------t~~l~~~l~~~----~v~~sPe~~~~G~A~~~~l~p~rIvvG~~~~~~~~~~~ll~~ 212 (432)
T 3pid_A 147 AVMI-IKSTIPVGF---------TRDIKERLGID----NVIFSPEFLREGRALYDNLHPSRIVIGERSARAERFADLLKE 212 (432)
T ss_dssp SEEE-ECSCCCTTH---------HHHHHHHHTCC----CEEECCCCCCTTSHHHHHHSCSCEEESSCSHHHHHHHHHHHH
T ss_pred cEEE-EeCCCChHH---------HHHHHHHHhhc----cEeecCccCCcchhhhcccCCceEEecCCHHHHHHHHHHHHh
Confidence 7666 455666652 23344445421 24457777544321 123345566666677778888764
Q ss_pred ----CCeEEEecCChhHHHHHHHHHHHHH
Q 022050 267 ----PHFTVWDNGDLVTHEVMGGLKNVYA 291 (303)
Q Consensus 267 ----~g~~~~~~~Di~g~e~~~~lkNv~A 291 (303)
.+..+.. .++-..|+.|.+-|.+-
T Consensus 213 ~~~~~~~~v~~-~~~~~AE~~Kl~~N~~~ 240 (432)
T 3pid_A 213 GAIKQDIPTLF-TDSTEAEAIKLFANTYL 240 (432)
T ss_dssp HCSSSSCCEEE-CCHHHHHHHHHHHHHHH
T ss_pred hhccCCCeEEe-cCccHHHHHHHHHHHHH
Confidence 2334444 57999999999999863
No 48
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.55 E-value=3.1e-14 Score=131.37 Aligned_cols=179 Identities=12% Similarity=0.087 Sum_probs=123.8
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
.|||+|||+|.||..+|..|+++ | ++|++|+|++++++++.+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~-G-----~~V~~~dr~~~~~~~~~~-------------------------------- 56 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEW-P-----GGVTVYDIRIEAMTPLAE-------------------------------- 56 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTS-T-----TCEEEECSSTTTSHHHHH--------------------------------
T ss_pred CCeEEEECcCHHHHHHHHHHHHC-C-----CeEEEEeCCHHHHHHHHH--------------------------------
Confidence 37999999999999999999998 8 899999999987654210
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCc-hhHHHHHHHHHHHhhccCCCCEEEEeeccCc
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS-TETKEVFEEISRYWKERITVPVIISLAKGVE 201 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~-~~~~~vl~~l~~~l~~~~~~~iivs~~nGi~ 201 (303)
.++.++++++++++ +|+||++||. ..++++++++.+.+++ +++||..++. .
T Consensus 57 -----------------------~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~~~l~~~l~~---g~ivv~~st~-~ 108 (296)
T 3qha_A 57 -----------------------AGATLADSVADVAA-ADLIHITVLDDAQVREVVGELAGHAKP---GTVIAIHSTI-S 108 (296)
T ss_dssp -----------------------TTCEECSSHHHHTT-SSEEEECCSSHHHHHHHHHHHHTTCCT---TCEEEECSCC-C
T ss_pred -----------------------CCCEEcCCHHHHHh-CCEEEEECCChHHHHHHHHHHHHhcCC---CCEEEEeCCC-C
Confidence 03456678888888 9999999995 5789999999988877 7787766533 3
Q ss_pred cccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHH--HHhccCceEEEEeCChhhHHHHHHHhcCCCeEEEecCChhH
Q 022050 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIAS--EIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDLVT 279 (303)
Q Consensus 202 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~--ev~~g~~~~~~~~~~~~~~~~i~~lf~~~g~~~~~~~Di~g 279 (303)
+.. .+.+.+.+... .+..+..|-+.. ....+.. .++.+++.+..++++.+|+.-+.+++...+.-.
T Consensus 109 ~~~---------~~~~~~~~~~~--g~~~~~~pv~g~~~~a~~g~l-~~~~gg~~~~~~~~~~ll~~~g~~~~~~g~~g~ 176 (296)
T 3qha_A 109 DTT---------AVELARDLKAR--DIHIVDAPVSGGAAAAARGEL-ATMVGADREVYERIKPAFKHWAAVVIHAGEPGA 176 (296)
T ss_dssp HHH---------HHHHHHHHGGG--TCEEEECCEESCHHHHHHTCE-EEEEECCHHHHHHHHHHHHHHEEEEEEEESTTH
T ss_pred HHH---------HHHHHHHHHHc--CCEEEeCCCcCCHHHHhcCCc-cEEecCCHHHHHHHHHHHHHHcCCeEEcCChhH
Confidence 321 12233333111 122233343321 1223332 234466777889999999988888887777888
Q ss_pred HHHHHHHHHHHHH--HHHHHhh
Q 022050 280 HEVMGGLKNVYAI--GAGTIYF 299 (303)
Q Consensus 280 ~e~~~~lkNv~Ai--~~G~~~g 299 (303)
.++.|..-|.+.- .+++.+.
T Consensus 177 a~~~Kl~~N~~~~~~~~~~~E~ 198 (296)
T 3qha_A 177 GTRMKLARNMLTFTSYAAACEA 198 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999997652 3444444
No 49
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=99.55 E-value=2.8e-14 Score=140.55 Aligned_cols=199 Identities=14% Similarity=0.104 Sum_probs=131.0
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
+|||+|||+|.||..+|..|+++ |. +++|++||+++++++.++..+ .+.+.+++.
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~-g~---g~~V~~~D~~~~~v~~l~~g~-----------------~~i~e~gl~---- 63 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHK-CP---HITVTVVDMNTAKIAEWNSDK-----------------LPIYEPGLD---- 63 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHH-CT---TSEEEEECSCHHHHHHHTSSS-----------------CSSCCTTHH----
T ss_pred CCEEEEECCCHHHHHHHHHHHhc-CC---CCEEEEEECCHHHHHHHHCCC-----------------CCcCCCCHH----
Confidence 58999999999999999999987 40 178999999998887654221 122222211
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch---------------hHHHHHHHHHHHhhcc
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST---------------ETKEVFEEISRYWKER 187 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~---------------~~~~vl~~l~~~l~~~ 187 (303)
+.+.... ..++.+++|+.+++++||+||+|||.. ++.+++++|.+++++
T Consensus 64 -------~~~~~~~--------~~~l~~t~~~~~~~~~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~- 127 (481)
T 2o3j_A 64 -------EIVFAAR--------GRNLFFSSDIPKAIAEADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGG- 127 (481)
T ss_dssp -------HHHHHHB--------TTTEEEESCHHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCS-
T ss_pred -------HHHHHhh--------cCCEEEECCHHHHhhcCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCC-
Confidence 0000000 025788899888889999999999764 388899999999887
Q ss_pred CCCCEEEEeeccCccccccccccCCHHHHHHhHhCC-CCccEEEEeCCCcHHHHhc----cCceEEEE-eCCh----hhH
Q 022050 188 ITVPVIISLAKGVEAELEAVPRIITPTQMINRATGV-PIENILYLGGPNIASEIYN----KEYANARI-CGAE----KWR 257 (303)
Q Consensus 188 ~~~~iivs~~nGi~~~~~~~~~~~~~~~~i~~~l~~-~~~~~~v~~GP~~a~ev~~----g~~~~~~~-~~~~----~~~ 257 (303)
+++||. .+++.+.+ ...+.+.+.+..+. ....+.+.++|.+..+... ..+..+++ +.+. +..
T Consensus 128 --g~iVV~-~STv~~gt-----~~~l~~~l~~~~~~~~~~d~~v~~~Pe~~~~G~a~~~~~~~~~iviG~~~~~~~~~a~ 199 (481)
T 2o3j_A 128 --PKIVVE-KSTVPVKA-----AESIGCILREAQKNNENLKFQVLSNPEFLAEGTAMKDLANPDRVLIGGESSPEGLQAV 199 (481)
T ss_dssp --CEEEEE-CSCCCTTH-----HHHHHHHHHHHTC----CCEEEEECCCCCCTTCHHHHHHSCSCEEEEECSSHHHHHHH
T ss_pred --CCEEEE-CCCCCCCH-----HHHHHHHHHHhhCcCcCCceEEEeCcccccccchhhcccCCCEEEEEecCchhhHHHH
Confidence 666663 33555542 22234444442221 1123557889988654321 22323444 3322 356
Q ss_pred HHHHHHhcCCCe-EEEecCChhHHHHHHHHHHHH
Q 022050 258 KPLAKFLRRPHF-TVWDNGDLVTHEVMGGLKNVY 290 (303)
Q Consensus 258 ~~i~~lf~~~g~-~~~~~~Di~g~e~~~~lkNv~ 290 (303)
+.++++|+..+. .++...|+...||.|.+-|.+
T Consensus 200 ~~l~~l~~~~~~~~~~~~~d~~~ae~~Kl~~N~~ 233 (481)
T 2o3j_A 200 AELVRIYENWVPRNRIITTNTWSSELSKLVANAF 233 (481)
T ss_dssp HHHHHHHHTTSCGGGEEEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCCCeEEecCHHHHHHHHHHHHHH
Confidence 888899988774 667788999999999999985
No 50
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.54 E-value=2.5e-14 Score=140.97 Aligned_cols=184 Identities=14% Similarity=0.087 Sum_probs=125.3
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
++||+|||+|+||+++|..|+++ | ++|++|+|+++++++++++ .++
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~-G-----~~V~v~~r~~~~~~~l~~~----------------------~~~------ 60 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESR-G-----YTVSIFNRSREKTEEVIAE----------------------NPG------ 60 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTT-T-----CCEEEECSSHHHHHHHHHH----------------------STT------
T ss_pred CCeEEEEccHHHHHHHHHHHHhC-C-----CeEEEEeCCHHHHHHHHhh----------------------CCC------
Confidence 47899999999999999999999 9 8999999998876543210 000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcC---CCEEEEecCc-hhHHHHHHHHHHHhhccCCCCEEEEeec
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWD---ADIVINGLPS-TETKEVFEEISRYWKERITVPVIISLAK 198 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~---aDlVIiaVp~-~~~~~vl~~l~~~l~~~~~~~iivs~~n 198 (303)
.++..++++++++++ +|+||++||+ +.++++++++.+++++ +++||++++
T Consensus 61 -----------------------~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~~vl~~l~~~l~~---g~iIId~s~ 114 (480)
T 2zyd_A 61 -----------------------KKLVPYYTVKEFVESLETPRRILLMVKAGAGTDAAIDSLKPYLDK---GDIIIDGGN 114 (480)
T ss_dssp -----------------------SCEEECSSHHHHHHTBCSSCEEEECSCSSSHHHHHHHHHGGGCCT---TCEEEECSC
T ss_pred -----------------------CCeEEeCCHHHHHhCCCCCCEEEEECCCHHHHHHHHHHHHhhcCC---CCEEEECCC
Confidence 135667788888776 9999999999 5899999999998887 789999999
Q ss_pred cCccccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHH--HhccCceEEEEeCChhhHHHHHHHhcCCCeE------
Q 022050 199 GVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASE--IYNKEYANARICGAEKWRKPLAKFLRRPHFT------ 270 (303)
Q Consensus 199 Gi~~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~e--v~~g~~~~~~~~~~~~~~~~i~~lf~~~g~~------ 270 (303)
|....+ ....+.+.+. + +..+.+|....+ ...|. .++.+++.+..+.++.+|+.-+.+
T Consensus 115 g~~~~t------~~l~~~l~~~-g-----~~~v~~pv~gg~~~a~~g~--~i~~gg~~~~~~~v~~ll~~~g~~~~dGe~ 180 (480)
T 2zyd_A 115 TFFQDT------IRRNRELSAE-G-----FNFIGTGVSGGEEGALKGP--SIMPGGQKEAYELVAPILTKIAAVAEDGEP 180 (480)
T ss_dssp CCHHHH------HHHHHHHHHT-T-----CEEEEEEEESHHHHHHHCC--EEEEESCHHHHHHHHHHHHHHSCBCTTSCB
T ss_pred CCHHHH------HHHHHHHHHC-C-----CCeeCCccccCHhHHhcCC--eEEecCCHHHHHHHHHHHHHHhccccCCCc
Confidence 976541 1112223221 2 112233433222 23343 244566677788888888866655
Q ss_pred -EEecCChhHHHHHHHHHHHH--HHHHHHHhhh
Q 022050 271 -VWDNGDLVTHEVMGGLKNVY--AIGAGTIYFL 300 (303)
Q Consensus 271 -~~~~~Di~g~e~~~~lkNv~--Ai~~G~~~gl 300 (303)
+....+.-...+.|..-|.+ ++..++++++
T Consensus 181 ~v~~~g~~G~g~~~Kl~~N~~~~~~~~~laEa~ 213 (480)
T 2zyd_A 181 CVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAY 213 (480)
T ss_dssp SBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEECCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444557778888876 4556666653
No 51
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=99.54 E-value=1.5e-13 Score=119.74 Aligned_cols=186 Identities=12% Similarity=0.171 Sum_probs=123.6
Q ss_pred ceEEEEC-CChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 44 LRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 44 ~kI~VIG-aG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
|||+|+| +|.||++++..|++. | ++|++|+|++++.+++..+ +. .+++.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~-g-----~~V~~~~r~~~~~~~~~~~-----~~-------------~~~~~------ 50 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATL-G-----HEIVVGSRREEKAEAKAAE-----YR-------------RIAGD------ 50 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT-T-----CEEEEEESSHHHHHHHHHH-----HH-------------HHHSS------
T ss_pred CeEEEEcCCCHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHHHHHH-----hc-------------ccccc------
Confidence 6899999 999999999999998 8 8999999998766542211 00 00000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeeccCcc
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nGi~~ 202 (303)
..+.. +++.++++++|+||+++|+...+++++++.+.+ + +++++++++|+..
T Consensus 51 -----------------------~~~~~-~~~~~~~~~~D~Vi~~~~~~~~~~~~~~l~~~~-~---~~~vi~~~~g~~~ 102 (212)
T 1jay_A 51 -----------------------ASITG-MKNEDAAEACDIAVLTIPWEHAIDTARDLKNIL-R---EKIVVSPLVPVSR 102 (212)
T ss_dssp -----------------------CCEEE-EEHHHHHHHCSEEEECSCHHHHHHHHHHTHHHH-T---TSEEEECCCCEEC
T ss_pred -----------------------CCCCh-hhHHHHHhcCCEEEEeCChhhHHHHHHHHHHHc-C---CCEEEEcCCCcCc
Confidence 02433 567777889999999999999999999988877 3 6899999999985
Q ss_pred ccccc--cccCCHHHHHHhHhCCCCccEEEEeCCCcHHHHhcc-----CceEEEEeCChhhHHHHHHHhcCC-CeEEEec
Q 022050 203 ELEAV--PRIITPTQMINRATGVPIENILYLGGPNIASEIYNK-----EYANARICGAEKWRKPLAKFLRRP-HFTVWDN 274 (303)
Q Consensus 203 ~~~~~--~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~ev~~g-----~~~~~~~~~~~~~~~~i~~lf~~~-g~~~~~~ 274 (303)
++... .......+.+.+.++. .. .+...|+.+.....+ .....+.+.+.+..+.+.++|+.. |+.+...
T Consensus 103 ~~~~~~~~~g~~~~~~l~~~~~~--~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~l~~~~~G~~~~~~ 179 (212)
T 1jay_A 103 GAKGFTYSSERSAAEIVAEVLES--EK-VVSALHTIPAARFANLDEKFDWDVPVCGDDDESKKVVMSLISEIDGLRPLDA 179 (212)
T ss_dssp CTTCCEECCSSCHHHHHHHHHTC--SC-EEECCTTCCHHHHHCTTCCCCEEEEEEESCHHHHHHHHHHHHHSTTEEEEEE
T ss_pred CCceeecCCCCcHHHHHHHhCCC--Ce-EEEEccchHHHHhhCcCCCCCccEEEECCcHHHHHHHHHHHHHcCCCCceec
Confidence 31000 0111224557777753 22 344555554433322 122222233466789999999999 9988777
Q ss_pred CChhHHHHHHHHHHHH
Q 022050 275 GDLVTHEVMGGLKNVY 290 (303)
Q Consensus 275 ~Di~g~e~~~~lkNv~ 290 (303)
.++-...|.+.+-|.|
T Consensus 180 ~~~~~a~~~k~~~~~~ 195 (212)
T 1jay_A 180 GPLSNSRLVESLTPLI 195 (212)
T ss_dssp ESGGGHHHHHTHHHHH
T ss_pred cchhHHHHhcchHHHH
Confidence 7776666666555543
No 52
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.54 E-value=5.5e-14 Score=128.97 Aligned_cols=172 Identities=17% Similarity=0.182 Sum_probs=120.3
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
+|||+|||+|.||..+|..|++. | ++|++|+|++++.+++..
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~-g-----~~V~~~~~~~~~~~~~~~-------------------------------- 45 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKE-G-----VTVYAFDLMEANVAAVVA-------------------------------- 45 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHT-T-----CEEEEECSSHHHHHHHHT--------------------------------
T ss_pred CCEEEEECccHHHHHHHHHHHHC-C-----CeEEEEeCCHHHHHHHHH--------------------------------
Confidence 48999999999999999999998 8 899999999876543110
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCc-hhHHHHHH---HHHHHhhccCCCCEEEEeec
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS-TETKEVFE---EISRYWKERITVPVIISLAK 198 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~-~~~~~vl~---~l~~~l~~~~~~~iivs~~n 198 (303)
..+..++++.++++++|+||++||. ..+++++. ++.+.+++ +++|+++++
T Consensus 46 -----------------------~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~---~~~vv~~~~ 99 (301)
T 3cky_A 46 -----------------------QGAQACENNQKVAAASDIIFTSLPNAGIVETVMNGPGGVLSACKA---GTVIVDMSS 99 (301)
T ss_dssp -----------------------TTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHSCT---TCEEEECCC
T ss_pred -----------------------CCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHcCcchHhhcCCC---CCEEEECCC
Confidence 0234456787888899999999965 56888885 78888877 789999998
Q ss_pred cCccccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHHH--hccCceEEEEeCChhhHHHHHHHhcCCCeEEEecCC
Q 022050 199 GVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEI--YNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGD 276 (303)
Q Consensus 199 Gi~~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~ev--~~g~~~~~~~~~~~~~~~~i~~lf~~~g~~~~~~~D 276 (303)
|.... .+.+.+.++... +.++..|...... ..+... ++.+++.+..+.++++|+..|++++...+
T Consensus 100 ~~~~~----------~~~l~~~~~~~g--~~~~~~p~~~~~~~a~~g~~~-~~~~g~~~~~~~v~~ll~~~g~~~~~~~~ 166 (301)
T 3cky_A 100 VSPSS----------TLKMAKVAAEKG--IDYVDAPVSGGTKGAEAGTLT-IMVGASEAVFEKIQPVLSVIGKDIYHVGD 166 (301)
T ss_dssp CCHHH----------HHHHHHHHHHTT--CEEEECCEESHHHHHHHTCEE-EEEESCHHHHHHHHHHHHHHEEEEEEEES
T ss_pred CCHHH----------HHHHHHHHHHcC--CeEEEccCCCCHHHHHcCCeE-EEECCCHHHHHHHHHHHHHhcCCEEEeCC
Confidence 87422 122333332111 1222344433221 123222 23455667788999999999999887777
Q ss_pred hhHHHHHHHHHHHHH
Q 022050 277 LVTHEVMGGLKNVYA 291 (303)
Q Consensus 277 i~g~e~~~~lkNv~A 291 (303)
.-...|.+.+-|.+.
T Consensus 167 ~g~~~~~Kl~~N~~~ 181 (301)
T 3cky_A 167 TGAGDAVKIVNNLLL 181 (301)
T ss_dssp TTHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 777789999999763
No 53
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=99.53 E-value=1.1e-13 Score=124.58 Aligned_cols=152 Identities=16% Similarity=0.146 Sum_probs=109.4
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
.+|||+|||+|.||.+++..|++. | ++|.+|+|++++++++.++ .
T Consensus 2 ~~m~i~iiG~G~mG~~~a~~l~~~-g-----~~v~~~~~~~~~~~~~~~~-------------------------~---- 46 (259)
T 2ahr_A 2 NAMKIGIIGVGKMASAIIKGLKQT-P-----HELIISGSSLERSKEIAEQ-------------------------L---- 46 (259)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTS-S-----CEEEEECSSHHHHHHHHHH-------------------------H----
T ss_pred CccEEEEECCCHHHHHHHHHHHhC-C-----CeEEEECCCHHHHHHHHHH-------------------------c----
Confidence 358999999999999999999988 8 8999999998765432100 0
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeeccCc
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nGi~ 201 (303)
++..++++.++++++|+||+++|++..+++++++. + ++++++.++|+.
T Consensus 47 -------------------------g~~~~~~~~~~~~~~D~Vi~~v~~~~~~~v~~~l~----~---~~~vv~~~~~~~ 94 (259)
T 2ahr_A 47 -------------------------ALPYAMSHQDLIDQVDLVILGIKPQLFETVLKPLH----F---KQPIISMAAGIS 94 (259)
T ss_dssp -------------------------TCCBCSSHHHHHHTCSEEEECSCGGGHHHHHTTSC----C---CSCEEECCTTCC
T ss_pred -------------------------CCEeeCCHHHHHhcCCEEEEEeCcHhHHHHHHHhc----c---CCEEEEeCCCCC
Confidence 12234567777889999999999998888887653 4 678899988887
Q ss_pred cccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHHHhccCceEEEEeC--ChhhHHHHHHHhcCCCeEEEecC
Q 022050 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICG--AEKWRKPLAKFLRRPHFTVWDNG 275 (303)
Q Consensus 202 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~ev~~g~~~~~~~~~--~~~~~~~i~~lf~~~g~~~~~~~ 275 (303)
.+ .+.+.++.. .+ .+..+|+++.....|... ++.+. +.+..+.++++|+..|...+..+
T Consensus 95 ~~------------~l~~~~~~~-~~-~v~~~p~~~~~~~~g~~~-i~~~~~~~~~~~~~~~~ll~~~G~~~~~~~ 155 (259)
T 2ahr_A 95 LQ------------RLATFVGQD-LP-LLRIMPNMNAQILQSSTA-LTGNALVSQELQARVRDLTDSFGSTFDISE 155 (259)
T ss_dssp HH------------HHHHHHCTT-SC-EEEEECCGGGGGTCEEEE-EEECTTCCHHHHHHHHHHHHTTEEEEECCG
T ss_pred HH------------HHHHhcCCC-CC-EEEEcCCchHHHcCceEE-EEcCCCCCHHHHHHHHHHHHhCCCEEEecH
Confidence 54 355666532 12 345789998887777322 23333 56678999999999885444443
No 54
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=99.53 E-value=1.1e-13 Score=127.79 Aligned_cols=185 Identities=13% Similarity=0.139 Sum_probs=113.3
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
.++||+|||+|.||++||..|+++ | ++|++||++++++++.... +... +.+..+... +.....
T Consensus 14 ~~~~I~VIG~G~mG~~iA~~la~~-G-----~~V~~~d~~~~~~~~~~~~-----i~~~---l~~~~~~g~-~~~~~~-- 76 (302)
T 1f0y_A 14 IVKHVTVIGGGLMGAGIAQVAAAT-G-----HTVVLVDQTEDILAKSKKG-----IEES---LRKVAKKKF-AENPKA-- 76 (302)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHHHHHHHH-----HHHH---HHHHHHTTS-SSCHHH--
T ss_pred cCCEEEEECCCHHHHHHHHHHHhC-C-----CeEEEEECCHHHHHHHHHH-----HHHH---HHHHHHcCC-CCcccc--
Confidence 357999999999999999999999 9 8999999999877653211 1110 000000000 000000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh--HHHHHHHHHHHhhccCCCCEEEEeecc
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE--TKEVFEEISRYWKERITVPVIISLAKG 199 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~--~~~vl~~l~~~l~~~~~~~iivs~~nG 199 (303)
. .+..++ .+.++++++|+++++++||+||++||+.. ++++++++.+++++ +++|+++++|
T Consensus 77 -~-~~~~~~-------------~~~~i~~~~~~~~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~---~~iv~s~ts~ 138 (302)
T 1f0y_A 77 -G-DEFVEK-------------TLSTIATSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAE---HTIFASNTSS 138 (302)
T ss_dssp -H-HHHHHH-------------HHHTEEEESCHHHHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCT---TCEEEECCSS
T ss_pred -c-hhhHHH-------------HHhceEEecCHHHhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCC---CeEEEECCCC
Confidence 0 000000 00257788999888999999999999974 67899999988887 7899999999
Q ss_pred CccccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHHHhccCceEEEEe--CChhhHHHHHHHhcCCCeEEEecCCh
Q 022050 200 VEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARIC--GAEKWRKPLAKFLRRPHFTVWDNGDL 277 (303)
Q Consensus 200 i~~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~ev~~g~~~~~~~~--~~~~~~~~i~~lf~~~g~~~~~~~Di 277 (303)
+... .+.+.+..+. .+ +...|..+... +....++.+ .+.+..+.+.+++..-|..++...|.
T Consensus 139 i~~~------------~l~~~~~~~~-~~-~g~h~~~P~~~--~~~~~i~~g~~~~~e~~~~~~~l~~~~G~~~v~~~~~ 202 (302)
T 1f0y_A 139 LQIT------------SIANATTRQD-RF-AGLHFFNPVPV--MKLVEVIKTPMTSQKTFESLVDFSKALGKHPVSCKDT 202 (302)
T ss_dssp SCHH------------HHHTTSSCGG-GE-EEEEECSSTTT--CCEEEEECCTTCCHHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCHH------------HHHHhcCCcc-cE-EEEecCCCccc--CceEEEeCCCCCCHHHHHHHHHHHHHcCCceEEecCc
Confidence 8764 2444443321 22 22233332222 211222223 25567788888888877766554453
No 55
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=99.53 E-value=6.1e-14 Score=136.34 Aligned_cols=193 Identities=15% Similarity=0.094 Sum_probs=133.8
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhcC
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (303)
.|++|||+|.||..+|..|+++ | ++|++||+++++++.++.. +.|.+.+++..
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~-G-----~~V~~~D~~~~kv~~L~~g-----------------~~pi~epgl~~---- 64 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKH-G-----VDVLGVDINQQTIDKLQNG-----------------QISIEEPGLQE---- 64 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-T-----CEEEEECSCHHHHHHHHTT-----------------CCSSCCTTHHH----
T ss_pred CccEEEeeCHHHHHHHHHHHHC-C-----CEEEEEECCHHHHHHHHCC-----------------CCCcCCCCHHH----
Confidence 6899999999999999999999 9 9999999999988876532 13455554321
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh------------HHHHHHHHHHHhhccCCCC
Q 022050 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE------------TKEVFEEISRYWKERITVP 191 (303)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~------------~~~vl~~l~~~l~~~~~~~ 191 (303)
++.+... ..++.+++|+ ++||+||+|||... +..+.+.+.+++++ ++
T Consensus 65 -------ll~~~~~-------~g~l~~ttd~----~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~---g~ 123 (431)
T 3ojo_A 65 -------VYEEVLS-------SGKLKVSTTP----EASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKK---GN 123 (431)
T ss_dssp -------HHHHHHH-------TTCEEEESSC----CCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCT---TE
T ss_pred -------HHHhhcc-------cCceEEeCch----hhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCC---CC
Confidence 1100000 0257888873 47999999998864 77888899998887 66
Q ss_pred EEEEeeccCccccccccccCCHHHHHHhHhCCC-CccEEEEeCCCcHHHHhc----cCceEEEEeCChhhHHHHHHHhcC
Q 022050 192 VIISLAKGVEAELEAVPRIITPTQMINRATGVP-IENILYLGGPNIASEIYN----KEYANARICGAEKWRKPLAKFLRR 266 (303)
Q Consensus 192 iivs~~nGi~~~~~~~~~~~~~~~~i~~~l~~~-~~~~~v~~GP~~a~ev~~----g~~~~~~~~~~~~~~~~i~~lf~~ 266 (303)
+|| ..+++.+.+ ...+.+.+.+..|.. ...+.++++|.+..+... ..|..++.+.+.+..+.++.+|+.
T Consensus 124 iVV-~~STV~pgt-----t~~v~~~i~e~~g~~~~~d~~v~~~Pe~~~~G~A~~~~~~p~~Iv~G~~~~~~~~~~~ly~~ 197 (431)
T 3ojo_A 124 TII-VESTIAPKT-----MDDFVKPVIENLGFTIGEDIYLVHCPERVLPGKILEELVHNNRIIGGVTKACIEAGKRVYRT 197 (431)
T ss_dssp EEE-ECSCCCTTH-----HHHTHHHHHHTTTCCBTTTEEEEECCCCCCTTSHHHHHHHSCEEEEESSHHHHHHHHHHHTT
T ss_pred EEE-EecCCChhH-----HHHHHHHHHHHcCCCcCCCeEEEECCCcCCCcchhhcccCCCEEEEeCCHHHHHHHHHHHHH
Confidence 554 666888762 333444443433321 124788999987654321 124445556677788999999986
Q ss_pred CCeEEEecCChhHHHHHHHHHHHH
Q 022050 267 PHFTVWDNGDLVTHEVMGGLKNVY 290 (303)
Q Consensus 267 ~g~~~~~~~Di~g~e~~~~lkNv~ 290 (303)
-+-..+...|+-..|.+|..-|.+
T Consensus 198 ~~~~~~~~~~~~~AE~~Kl~~N~~ 221 (431)
T 3ojo_A 198 FVQGEMIETDARTAEMSKLMENTY 221 (431)
T ss_dssp TCCSCEEEEEHHHHHHHHHHHHHH
T ss_pred HhCCcEEeCCHHHHHHHHHHHHHH
Confidence 554344457899999999999986
No 56
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.52 E-value=3.7e-14 Score=139.66 Aligned_cols=183 Identities=15% Similarity=0.042 Sum_probs=122.5
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhcC
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (303)
|||+|||+|+||+++|..|+++ | ++|.+|+|++++++++++. + .++
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~-G-----~~V~v~dr~~~~~~~l~~~--------~-------------~~g------- 48 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH-G-----FVVCAFNRTVSKVDDFLAN--------E-------------AKG------- 48 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSTHHHHHHHHT--------T-------------TTT-------
T ss_pred CeEEEEChHHHHHHHHHHHHHC-C-----CeEEEEeCCHHHHHHHHhc--------c-------------ccC-------
Confidence 7999999999999999999999 8 8999999999876543210 0 000
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHh---cCCCEEEEecCch-hHHHHHHHHHHHhhccCCCCEEEEeecc
Q 022050 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAV---WDADIVINGLPST-ETKEVFEEISRYWKERITVPVIISLAKG 199 (303)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~---~~aDlVIiaVp~~-~~~~vl~~l~~~l~~~~~~~iivs~~nG 199 (303)
.++..++++++++ +++|+||++||+. .++++++++.+++++ +++||++++|
T Consensus 49 ----------------------~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~v~~vl~~l~~~l~~---g~iII~~s~~ 103 (482)
T 2pgd_A 49 ----------------------TKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDNFIEKLVPLLDI---GDIIIDGGNS 103 (482)
T ss_dssp ----------------------SSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHHHHHHHHHHCCT---TCEEEECSCC
T ss_pred ----------------------CCeEEeCCHHHHHhhccCCCEEEEeCCChHHHHHHHHHHHhhcCC---CCEEEECCCC
Confidence 0355667888876 4899999999995 899999999999887 7899999988
Q ss_pred CccccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHHH--hccCceEEEEeCChhhHHHHHHHhcCCCeEE------
Q 022050 200 VEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEI--YNKEYANARICGAEKWRKPLAKFLRRPHFTV------ 271 (303)
Q Consensus 200 i~~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~ev--~~g~~~~~~~~~~~~~~~~i~~lf~~~g~~~------ 271 (303)
..... +.+.+.+... .+..+.+|....+. ..|. .++.+++.+..+.++.+|+..+.++
T Consensus 104 ~~~~~----------~~l~~~l~~~--g~~~v~~pv~g~~~~a~~g~--~i~~gg~~e~~~~v~~ll~~~g~~v~d~~~~ 169 (482)
T 2pgd_A 104 EYRDT----------MRRCRDLKDK--GILFVGSGVSGGEDGARYGP--SLMPGGNKEAWPHIKAIFQGIAAKVGTGEPC 169 (482)
T ss_dssp CHHHH----------HHHHHHHHHT--TCEEEEEEEESHHHHHHHCC--EEEEEECTTTHHHHHHHHHHHSCBCTTSCBS
T ss_pred CHHHH----------HHHHHHHHHc--CCeEeCCCCCCChhhhccCC--eEEeCCCHHHHHHHHHHHHHhhhhccCCCcc
Confidence 76531 1123333111 12233455543332 3343 2344556677888999998877765
Q ss_pred -EecCChhHHHHHHHHHHHH--HHHHHHHhh
Q 022050 272 -WDNGDLVTHEVMGGLKNVY--AIGAGTIYF 299 (303)
Q Consensus 272 -~~~~Di~g~e~~~~lkNv~--Ai~~G~~~g 299 (303)
....+.-...+.+..-|.+ ++..++.+.
T Consensus 170 ~~~~g~~g~g~~~Kl~~N~~~~~~~~~i~Ea 200 (482)
T 2pgd_A 170 CDWVGDDGAGHFVKMVHNGIEYGDMQLICEA 200 (482)
T ss_dssp CCCCEETTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEECCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222233346777788865 334555554
No 57
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.52 E-value=1.2e-13 Score=128.84 Aligned_cols=185 Identities=17% Similarity=0.157 Sum_probs=109.6
Q ss_pred eccCCchhhhhhHHHHHhccCC-CCCceEEEECCChHHHHHHHHHHHhcCCCCCCe--eEEEEecCCchhhhhhhhhHHH
Q 022050 19 HHTNGSLEERLDELRRLMGKAE-GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV--LIRIWRRPGRSVDRATAEHLFE 95 (303)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~-~~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~--~V~l~~r~~~~~~~~~~~~l~~ 95 (303)
||+.| |--|---+..+++... ..+|||+|||+|.||.++|..|++. | + +|++|+|++++++.+.+
T Consensus 9 ~~~~~-~~~~~~~~~~~~~~~~~~~~~kI~IIG~G~mG~slA~~l~~~-G-----~~~~V~~~dr~~~~~~~a~~----- 76 (314)
T 3ggo_A 9 HHSSG-LVPRGSHMKNIIKILKSLSMQNVLIVGVGFMGGSFAKSLRRS-G-----FKGKIYGYDINPESISKAVD----- 76 (314)
T ss_dssp ---------------------CCCSCSEEEEESCSHHHHHHHHHHHHT-T-----CCSEEEEECSCHHHHHHHHH-----
T ss_pred ccccC-ccccccCcCcCCchhhhcCCCEEEEEeeCHHHHHHHHHHHhC-C-----CCCEEEEEECCHHHHHHHHH-----
Confidence 44444 3333333554444432 2348999999999999999999998 8 6 89999999876543110
Q ss_pred HHhhhhhHHHHhhhhcccchhhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHH-HhcCCCEEEEecCchhHH
Q 022050 96 VINSREDVLRRLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQE-AVWDADIVINGLPSTETK 174 (303)
Q Consensus 96 ~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~-a~~~aDlVIiaVp~~~~~ 174 (303)
. +. ....++++++ ++++||+||+|||+..+.
T Consensus 77 ------------------~-G~-----------------------------~~~~~~~~~~~~~~~aDvVilavp~~~~~ 108 (314)
T 3ggo_A 77 ------------------L-GI-----------------------------IDEGTTSIAKVEDFSPDFVMLSSPVRTFR 108 (314)
T ss_dssp ------------------T-TS-----------------------------CSEEESCTTGGGGGCCSEEEECSCGGGHH
T ss_pred ------------------C-CC-----------------------------cchhcCCHHHHhhccCCEEEEeCCHHHHH
Confidence 0 00 1134567777 789999999999999999
Q ss_pred HHHHHHHHHhhccCCCCEEEEeeccCccccccccccCCHHHHHHhHhCCC---CccEE--EEeCCCcHH-HHhccCceEE
Q 022050 175 EVFEEISRYWKERITVPVIISLAKGVEAELEAVPRIITPTQMINRATGVP---IENIL--YLGGPNIAS-EIYNKEYANA 248 (303)
Q Consensus 175 ~vl~~l~~~l~~~~~~~iivs~~nGi~~~~~~~~~~~~~~~~i~~~l~~~---~~~~~--v~~GP~~a~-ev~~g~~~~~ 248 (303)
++++++.+++++ +++|+++++. ... +.+.+.+.++.. .+|+. ..+||..+. ++..|.+..+
T Consensus 109 ~vl~~l~~~l~~---~~iv~d~~Sv-k~~---------~~~~~~~~l~~~~v~~hPm~G~e~sG~~~A~~~Lf~g~~~il 175 (314)
T 3ggo_A 109 EIAKKLSYILSE---DATVTDQGSV-KGK---------LVYDLENILGKRFVGGHPIAGTEKSGVEYSLDNLYEGKKVIL 175 (314)
T ss_dssp HHHHHHHHHSCT---TCEEEECCSC-CTH---------HHHHHHHHHGGGEECEEECCCCCCCSGGGCCTTTTTTCEEEE
T ss_pred HHHHHHhhccCC---CcEEEECCCC-cHH---------HHHHHHHhcCCCEEecCcccCCcccchhhhhhhhhcCCEEEE
Confidence 999999999887 7887765532 211 122344433211 12211 123444433 2345554433
Q ss_pred EEe--CChhhHHHHHHHhcCCCeEEEecCC
Q 022050 249 RIC--GAEKWRKPLAKFLRRPHFTVWDNGD 276 (303)
Q Consensus 249 ~~~--~~~~~~~~i~~lf~~~g~~~~~~~D 276 (303)
+.. .+.+..+.++++|+..|.+++..+.
T Consensus 176 ~~~~~~~~~~~~~v~~l~~~~G~~v~~~~~ 205 (314)
T 3ggo_A 176 TPTKKTDKKRLKLVKRVWEDVGGVVEYMSP 205 (314)
T ss_dssp CCCTTSCHHHHHHHHHHHHHTTCEEEECCH
T ss_pred EeCCCCCHHHHHHHHHHHHHcCCEEEEcCH
Confidence 332 3556789999999999988776543
No 58
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.52 E-value=1.6e-13 Score=125.87 Aligned_cols=183 Identities=13% Similarity=0.099 Sum_probs=117.2
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
++||+|||+|.||++||..|+.+ | ++|++||++++.+++.... +... +.++......+...
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~-G-----~~V~l~d~~~~~~~~~~~~-----i~~~---~~~~~~~g~~~~~~----- 64 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFH-G-----FAVTAYDINTDALDAAKKR-----FEGL---AAVYEKEVAGAADG----- 64 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSHHHHHHHHHH-----HHHH---HHHHHHHSTTCTTT-----
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-----CeEEEEeCCHHHHHHHHHH-----HHHH---HHHHHHhcccCCHH-----
Confidence 47999999999999999999999 9 8999999999887654321 1110 00000000000000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch--hHHHHHHHHHHHhhccCCCCEEEEeeccC
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST--ETKEVFEEISRYWKERITVPVIISLAKGV 200 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~--~~~~vl~~l~~~l~~~~~~~iivs~~nGi 200 (303)
.. ++ . +.++..++|+++++++||+||++||++ .++++++++.+++++ +++++++++++
T Consensus 65 --~~--~~-~------------~~~i~~~~~~~~~~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~---~~il~s~tS~~ 124 (283)
T 4e12_A 65 --AA--QK-A------------LGGIRYSDDLAQAVKDADLVIEAVPESLDLKRDIYTKLGELAPA---KTIFATNSSTL 124 (283)
T ss_dssp --HH--HH-H------------HHHCEEESCHHHHTTTCSEEEECCCSCHHHHHHHHHHHHHHSCT---TCEEEECCSSS
T ss_pred --HH--HH-H------------HcCeEEeCCHHHHhccCCEEEEeccCcHHHHHHHHHHHHhhCCC---CcEEEECCCCC
Confidence 00 00 0 014678899988899999999999998 789999999999888 88999999887
Q ss_pred ccccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHHHhccCceEEEEe--CChhhHHHHHHHhcCCCeEEEec-CCh
Q 022050 201 EAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARIC--GAEKWRKPLAKFLRRPHFTVWDN-GDL 277 (303)
Q Consensus 201 ~~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~ev~~g~~~~~~~~--~~~~~~~~i~~lf~~~g~~~~~~-~Di 277 (303)
... .+.+.++.+. .+. -..|..+. ..+....++.. .+.+..+.+.+++..-|..++.. .|.
T Consensus 125 ~~~------------~la~~~~~~~-~~i-g~h~~~p~--~~~~lvevv~~~~t~~~~~~~~~~l~~~~g~~~v~v~~~~ 188 (283)
T 4e12_A 125 LPS------------DLVGYTGRGD-KFL-ALHFANHV--WVNNTAEVMGTTKTDPEVYQQVVEFASAIGMVPIELKKEK 188 (283)
T ss_dssp CHH------------HHHHHHSCGG-GEE-EEEECSST--TTSCEEEEEECTTSCHHHHHHHHHHHHHTTCEEEECSSCC
T ss_pred CHH------------HHHhhcCCCc-ceE-EEccCCCc--ccCceEEEEeCCCCCHHHHHHHHHHHHHcCCEEEEEecCC
Confidence 653 2455554332 221 12222221 12222333333 24567888899998888776654 565
Q ss_pred hHH
Q 022050 278 VTH 280 (303)
Q Consensus 278 ~g~ 280 (303)
.|.
T Consensus 189 ~g~ 191 (283)
T 4e12_A 189 AGY 191 (283)
T ss_dssp TTT
T ss_pred CCE
Confidence 544
No 59
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=99.52 E-value=2.6e-13 Score=132.16 Aligned_cols=216 Identities=16% Similarity=0.094 Sum_probs=138.1
Q ss_pred ccCcceeccCCchhhhhhHHHHHhccCCCCCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhh
Q 022050 13 SSNGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEH 92 (303)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~ 92 (303)
||.-+-|||+|-.- ....|.+|+|||.|.+|..+|..||+. | ++|+.+|.++++++.+|..
T Consensus 3 ~~~~~~~~~~~~~p------------~~~~m~~IaViGlGYVGLp~A~~~A~~-G-----~~V~g~Did~~kV~~ln~G- 63 (444)
T 3vtf_A 3 SSHHHHHHSSGLVP------------RGSHMASLSVLGLGYVGVVHAVGFALL-G-----HRVVGYDVNPSIVERLRAG- 63 (444)
T ss_dssp ----------CCCC------------TTCCCCEEEEECCSHHHHHHHHHHHHH-T-----CEEEEECSCHHHHHHHHTT-
T ss_pred cccccccccCCcCC------------CCCCCCEEEEEccCHHHHHHHHHHHhC-C-----CcEEEEECCHHHHHHHHCC-
Confidence 56667788887542 223567999999999999999999999 8 9999999999998876532
Q ss_pred HHHHHhhhhhHHHHhhhhcccchhhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCc--
Q 022050 93 LFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS-- 170 (303)
Q Consensus 93 l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~-- 170 (303)
+.|.+.++++. ++.+... -.++++++|..+++.+||++|+|||.
T Consensus 64 ----------------~~pi~Epgl~e-----------ll~~~~~-------~g~l~~tt~~~~ai~~ad~~~I~VpTP~ 109 (444)
T 3vtf_A 64 ----------------RPHIYEPGLEE-----------ALGRALS-------SGRLSFAESAEEAVAATDATFIAVGTPP 109 (444)
T ss_dssp ----------------CCSSCCTTHHH-----------HHHHHHH-------TTCEEECSSHHHHHHTSSEEEECCCCCB
T ss_pred ----------------CCCCCCCCHHH-----------HHHHHHH-------cCCeeEEcCHHHHHhcCCceEEEecCCC
Confidence 13444444321 1111100 03688999999999999999999975
Q ss_pred --------hhHHHHHHHHHHHhhccCCCCEEEEeeccCccccccccccCCH-HHHHHhHhCCCCccEEEEeCCCcHHHHh
Q 022050 171 --------TETKEVFEEISRYWKERITVPVIISLAKGVEAELEAVPRIITP-TQMINRATGVPIENILYLGGPNIASEIY 241 (303)
Q Consensus 171 --------~~~~~vl~~l~~~l~~~~~~~iivs~~nGi~~~~~~~~~~~~~-~~~i~~~l~~~~~~~~v~~GP~~a~ev~ 241 (303)
.++.++.+.|.+++++.-+++ +|..-+.+.+. +.... ..++.+..+. ..+.+.+.|.+..+..
T Consensus 110 ~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~-lVV~eSTVppG-----tte~~~~~~l~~~~~~--~~f~v~~~PErl~eG~ 181 (444)
T 3vtf_A 110 APDGSADLRYVEAAARAVGRGIRAKGRWH-LVVVKSTVPPG-----TTEGLVARAVAEEAGG--VKFSVASNPEFLREGS 181 (444)
T ss_dssp CTTSSBCCHHHHHHHHHHHHHHHHHCSCC-EEEECSCCCTT-----TTTTHHHHHHHTTTTT--CCCEEEECCCCCCTTS
T ss_pred CCCCCCCcHHHHHHHHHHHHHHhhcCCCe-EEEEeCCCCCc-----hHHHHHHHHHHHhCCC--CCceeecCcccccCCc
Confidence 268889999999886411134 44455566665 33332 3444444332 3467888998866432
Q ss_pred c----cCceEEEEe-CChhhHHHHHHHhcCCCeEEEecCChhHHHHHHHHHHHH
Q 022050 242 N----KEYANARIC-GAEKWRKPLAKFLRRPHFTVWDNGDLVTHEVMGGLKNVY 290 (303)
Q Consensus 242 ~----g~~~~~~~~-~~~~~~~~i~~lf~~~g~~~~~~~Di~g~e~~~~lkNv~ 290 (303)
. ..+..++.+ .++...+.+.++++.-.-.. ...|+..+|++|.+-|.|
T Consensus 182 a~~d~~~~~riViG~~~~~a~~~~~~ly~~~~~~~-~~~~~~~AE~~Kl~eN~~ 234 (444)
T 3vtf_A 182 ALEDFFKPDRIVIGAGDERAASFLLDVYKAVDAPK-LVMKPREAELVKYASNVF 234 (444)
T ss_dssp HHHHHHSCSCEEEEESSHHHHHHHHHHTTTSCSCE-EEECHHHHHHHHHHHHHH
T ss_pred cccccccCCcEEEcCCCHHHHHHHHHHHhccCCCE-EEechhHHHHHHHHHHHH
Confidence 1 123334444 45556788888887644433 346899999999999986
No 60
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.52 E-value=1.9e-13 Score=124.41 Aligned_cols=177 Identities=18% Similarity=0.179 Sum_probs=119.1
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
||||+|||+|.||.++|..|++ | ++|++|+|++++.+++.+. +
T Consensus 1 M~~i~iiG~G~~G~~~a~~l~~--g-----~~V~~~~~~~~~~~~~~~~------------------------g------ 43 (289)
T 2cvz_A 1 MEKVAFIGLGAMGYPMAGHLAR--R-----FPTLVWNRTFEKALRHQEE------------------------F------ 43 (289)
T ss_dssp -CCEEEECCSTTHHHHHHHHHT--T-----SCEEEECSSTHHHHHHHHH------------------------H------
T ss_pred CCeEEEEcccHHHHHHHHHHhC--C-----CeEEEEeCCHHHHHHHHHC------------------------C------
Confidence 4799999999999999999986 6 8999999998766532110 1
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh-HHHHHHHHHHHhhccCCCCEEEEeeccCc
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE-TKEVFEEISRYWKERITVPVIISLAKGVE 201 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~-~~~vl~~l~~~l~~~~~~~iivs~~nGi~ 201 (303)
+..++ +.++++++|+||++||+.. ++++++++.+.+++ +++|++++++-.
T Consensus 44 -------------------------~~~~~-~~~~~~~~D~vi~~v~~~~~~~~v~~~l~~~l~~---~~~vv~~s~~~~ 94 (289)
T 2cvz_A 44 -------------------------GSEAV-PLERVAEARVIFTCLPTTREVYEVAEALYPYLRE---GTYWVDATSGEP 94 (289)
T ss_dssp -------------------------CCEEC-CGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCCT---TEEEEECSCCCH
T ss_pred -------------------------CcccC-HHHHHhCCCEEEEeCCChHHHHHHHHHHHhhCCC---CCEEEECCCCCH
Confidence 11222 4566789999999999875 88899988887776 778887765432
Q ss_pred cccccccccCCHHHHHHhHhCCCCccEEEEeCCCc--HHHHhccCceEEEEeCChhhHHHHHHHhcCCCeEEEecCChhH
Q 022050 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNI--ASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDLVT 279 (303)
Q Consensus 202 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~--a~ev~~g~~~~~~~~~~~~~~~~i~~lf~~~g~~~~~~~Di~g 279 (303)
.. .+.+.+.++.. .+.++..|.+ +.....+... ++.+.+.+..+.++++| ..|++++...|.-.
T Consensus 95 ~~----------~~~l~~~~~~~--g~~~~~~p~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~ll-~~g~~~~~~~~~~~ 160 (289)
T 2cvz_A 95 EA----------SRRLAERLREK--GVTYLDAPVSGGTSGAEAGTLT-VMLGGPEEAVERVRPFL-AYAKKVVHVGPVGA 160 (289)
T ss_dssp HH----------HHHHHHHHHTT--TEEEEECCEESHHHHHHHTCEE-EEEESCHHHHHHHGGGC-TTEEEEEEEESTTH
T ss_pred HH----------HHHHHHHHHHc--CCEEEEecCCCChhHHhhCCeE-EEECCCHHHHHHHHHHH-hhcCCeEEcCCCcH
Confidence 21 12344444321 1223344643 2223344322 23356667889999999 99998877777778
Q ss_pred HHHHHHHHHHH--HHHHHHHhh
Q 022050 280 HEVMGGLKNVY--AIGAGTIYF 299 (303)
Q Consensus 280 ~e~~~~lkNv~--Ai~~G~~~g 299 (303)
..|.+..-|.+ .+..++.+.
T Consensus 161 ~~~~k~~~n~~~~~~~~~~~Ea 182 (289)
T 2cvz_A 161 GHAVKAINNALLAVNLWAAGEG 182 (289)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 88999988986 234455443
No 61
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.51 E-value=2.2e-13 Score=124.59 Aligned_cols=170 Identities=15% Similarity=0.165 Sum_probs=113.7
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhcC
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (303)
|||+|||+|+||+++|..|++. | ++|++|+|++++++++..
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~-g-----~~V~~~~~~~~~~~~~~~--------------------------------- 41 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKH-G-----YPLIIYDVFPDACKEFQD--------------------------------- 41 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHT-T-----CCEEEECSSTHHHHHHHT---------------------------------
T ss_pred CeEEEEeccHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHHHHH---------------------------------
Confidence 6899999999999999999998 8 899999999876543110
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecC-chhHHHHHHHHH---HHhhccCCCCEEEEeecc
Q 022050 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLP-STETKEVFEEIS---RYWKERITVPVIISLAKG 199 (303)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp-~~~~~~vl~~l~---~~l~~~~~~~iivs~~nG 199 (303)
..+.+++++.++++++|+||++|| ++.+++++.++. +++++ +++|++ ++|
T Consensus 42 ----------------------~g~~~~~~~~~~~~~~Dvvi~~vp~~~~~~~v~~~~~~~~~~l~~---~~~vv~-~s~ 95 (296)
T 2gf2_A 42 ----------------------AGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGILKKVKK---GSLLID-SST 95 (296)
T ss_dssp ----------------------TTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTSGGGTCCT---TCEEEE-CSC
T ss_pred ----------------------cCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHhCchhHHhcCCC---CCEEEE-CCC
Confidence 024455678888889999999995 567888888753 34555 778888 888
Q ss_pred CccccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHHH--hccCceEEEEeCChhhHHHHHHHhcCCCeEEEecCCh
Q 022050 200 VEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEI--YNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDL 277 (303)
Q Consensus 200 i~~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~ev--~~g~~~~~~~~~~~~~~~~i~~lf~~~g~~~~~~~Di 277 (303)
+.+.. ...+.+.+.+. + ......|-..... ..+. ..++.+.+.+..+.++++|+..|++++...+.
T Consensus 96 ~~~~~-----~~~~~~~~~~~-g-----~~~~~~p~~~g~~~a~~~~-~~~~~~~~~~~~~~v~~l~~~~g~~~~~~~~~ 163 (296)
T 2gf2_A 96 IDPAV-----SKELAKEVEKM-G-----AVFMDAPVSGGVGAARSGN-LTFMVGGVEDEFAAAQELLGCMGSNVVYCGAV 163 (296)
T ss_dssp CCHHH-----HHHHHHHHHHT-T-----CEEEECCEESHHHHHHHTC-EEEEEESCGGGHHHHHHHHTTTEEEEEEEEST
T ss_pred CCHHH-----HHHHHHHHHHc-C-----CEEEEcCCCCChhHHhcCc-EEEEeCCCHHHHHHHHHHHHHHcCCeEEeCCc
Confidence 87752 11111222221 1 1112223222211 1232 22334566778899999999999988776554
Q ss_pred hHHHHHHHHHHHH
Q 022050 278 VTHEVMGGLKNVY 290 (303)
Q Consensus 278 ~g~e~~~~lkNv~ 290 (303)
-...+.+..-|.+
T Consensus 164 g~~~~~kl~~n~~ 176 (296)
T 2gf2_A 164 GTGQAAKICNNML 176 (296)
T ss_dssp THHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHH
Confidence 4457777777854
No 62
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=99.50 E-value=6.3e-14 Score=128.32 Aligned_cols=153 Identities=16% Similarity=0.140 Sum_probs=108.7
Q ss_pred CceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 43 ~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
+|||+|||+ |.||+++|..|++. | ++|++|+|++++++.+.. .
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~-g-----~~V~~~~r~~~~~~~~~~--------------------------~---- 54 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDS-A-----HHLAAIEIAPEGRDRLQG--------------------------M---- 54 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHS-S-----SEEEEECCSHHHHHHHHH--------------------------T----
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC-C-----CEEEEEECCHHHHHHHHh--------------------------c----
Confidence 479999999 99999999999998 8 899999999876543110 0
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeeccCc
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nGi~ 201 (303)
.+..+ ++.++++++|+||++||++.++++++++.+++++ +++|+++++|..
T Consensus 55 -------------------------g~~~~-~~~~~~~~aDvVi~av~~~~~~~v~~~l~~~l~~---~~ivv~~s~~~~ 105 (286)
T 3c24_A 55 -------------------------GIPLT-DGDGWIDEADVVVLALPDNIIEKVAEDIVPRVRP---GTIVLILDAAAP 105 (286)
T ss_dssp -------------------------TCCCC-CSSGGGGTCSEEEECSCHHHHHHHHHHHGGGSCT---TCEEEESCSHHH
T ss_pred -------------------------CCCcC-CHHHHhcCCCEEEEcCCchHHHHHHHHHHHhCCC---CCEEEECCCCch
Confidence 01111 3456678999999999999999999999988877 789999888874
Q ss_pred cccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHH--------HhccCc-------eEEE-EeCChhhHHHHHHHhc
Q 022050 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASE--------IYNKEY-------ANAR-ICGAEKWRKPLAKFLR 265 (303)
Q Consensus 202 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~e--------v~~g~~-------~~~~-~~~~~~~~~~i~~lf~ 265 (303)
... +.+..+ .. ..+..+|+++.+ ...|.+ ...+ ...+.+..+.++++|+
T Consensus 106 ~~~------------l~~~~~--~~-~~v~~~P~~~~~~~~~~~~~~~~g~l~~~~~~~~i~~~~~~~~~~~~~v~~l~~ 170 (286)
T 3c24_A 106 YAG------------VMPERA--DI-TYFIGHPCHPPLFNDETDPAARTDYHGGIAKQAIVCALMQGPEEHYAIGADICE 170 (286)
T ss_dssp HHT------------CSCCCT--TS-EEEEEEECCSCSSCCCCSHHHHTCSSSSSSCEEEEEEEEESCTHHHHHHHHHHH
T ss_pred hHH------------HHhhhC--CC-eEEecCCCCccccccccchhhccCcccccccceeeeeccCCCHHHHHHHHHHHH
Confidence 431 222111 11 234477777544 666642 2222 2456678899999999
Q ss_pred CCCe---EEEecC
Q 022050 266 RPHF---TVWDNG 275 (303)
Q Consensus 266 ~~g~---~~~~~~ 275 (303)
..|. +++..+
T Consensus 171 ~~G~~~~~~~~v~ 183 (286)
T 3c24_A 171 TMWSPVTRTHRVT 183 (286)
T ss_dssp HHTCSEEEEEECC
T ss_pred HhcCCcceEEEeC
Confidence 9898 665544
No 63
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.49 E-value=9.7e-14 Score=126.82 Aligned_cols=171 Identities=15% Similarity=0.115 Sum_probs=117.7
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
.+|||+|||+|.||+.+|..|++. | ++|++|+ ++++++++...
T Consensus 2 ~~m~i~iiG~G~~G~~~a~~l~~~-g-----~~V~~~~-~~~~~~~~~~~------------------------------ 44 (295)
T 1yb4_A 2 NAMKLGFIGLGIMGSPMAINLARA-G-----HQLHVTT-IGPVADELLSL------------------------------ 44 (295)
T ss_dssp --CEEEECCCSTTHHHHHHHHHHT-T-----CEEEECC-SSCCCHHHHTT------------------------------
T ss_pred CCCEEEEEccCHHHHHHHHHHHhC-C-----CEEEEEc-CHHHHHHHHHc------------------------------
Confidence 358999999999999999999998 8 8999999 88765432100
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh-HHHHHH---HHHHHhhccCCCCEEEEee
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE-TKEVFE---EISRYWKERITVPVIISLA 197 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~-~~~vl~---~l~~~l~~~~~~~iivs~~ 197 (303)
.+..++++.++++++|+||+++|... +++++. ++.+.+++ +++|++++
T Consensus 45 -------------------------g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~---~~~vv~~s 96 (295)
T 1yb4_A 45 -------------------------GAVNVETARQVTEFADIIFIMVPDTPQVEDVLFGEHGCAKTSLQ---GKTIVDMS 96 (295)
T ss_dssp -------------------------TCBCCSSHHHHHHTCSEEEECCSSHHHHHHHHHSTTSSTTSCCT---TEEEEECS
T ss_pred -------------------------CCcccCCHHHHHhcCCEEEEECCCHHHHHHHHhCchhHhhcCCC---CCEEEECC
Confidence 12234567777889999999997765 788887 77777776 78888888
Q ss_pred ccCccccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHH--HhccCceEEEEeCChhhHHHHHHHhcCCCeEEEecC
Q 022050 198 KGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASE--IYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNG 275 (303)
Q Consensus 198 nGi~~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~e--v~~g~~~~~~~~~~~~~~~~i~~lf~~~g~~~~~~~ 275 (303)
+|.... .+.+.+.++.. .+.++..|..... ...+... ++.+++.+..+.++++|+..+++++...
T Consensus 97 ~~~~~~----------~~~l~~~~~~~--g~~~~~~p~~~~~~~a~~g~~~-~~~~~~~~~~~~~~~ll~~~g~~~~~~~ 163 (295)
T 1yb4_A 97 SISPIE----------TKRFAQRVNEM--GADYLDAPVSGGEIGAREGTLS-IMVGGEQKVFDRVKPLFDILGKNITLVG 163 (295)
T ss_dssp CCCHHH----------HHHHHHHHHTT--TEEEEECCEESHHHHHHHTCEE-EEEESCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred CCCHHH----------HHHHHHHHHHc--CCeEEEccCCCCHHHHHcCCeE-EEECCCHHHHHHHHHHHHHhcCCEEEeC
Confidence 774321 12344444321 1222334433221 1234322 3345566778899999999999888877
Q ss_pred ChhHHHHHHHHHHHH
Q 022050 276 DLVTHEVMGGLKNVY 290 (303)
Q Consensus 276 Di~g~e~~~~lkNv~ 290 (303)
+.-..+|.+.+-|.+
T Consensus 164 ~~~~~~~~Kl~~n~~ 178 (295)
T 1yb4_A 164 GNGDGQTCKVANQII 178 (295)
T ss_dssp STTHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 887889999999976
No 64
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.49 E-value=2.9e-13 Score=123.74 Aligned_cols=164 Identities=15% Similarity=0.092 Sum_probs=108.6
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
+|||+|||+|+||+++|..|+++ |. +++|++|+|++++++.+.. .+.
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~-g~---~~~V~~~d~~~~~~~~~~~------------------------~g~----- 52 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRD-HP---HYKIVGYNRSDRSRDIALE------------------------RGI----- 52 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-CT---TSEEEEECSSHHHHHHHHH------------------------TTS-----
T ss_pred cceEEEEeeCHHHHHHHHHHHhC-CC---CcEEEEEcCCHHHHHHHHH------------------------cCC-----
Confidence 58999999999999999999987 51 1689999999876543110 000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHH-hhccCCCCEEEEeeccCc
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRY-WKERITVPVIISLAKGVE 201 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~-l~~~~~~~iivs~~nGi~ 201 (303)
....+++++++++++|+||+|||++..+++++++.++ +++ +++|++++++..
T Consensus 53 ------------------------~~~~~~~~~~~~~~aDvVilavp~~~~~~v~~~l~~~~l~~---~~ivi~~~~~~~ 105 (290)
T 3b1f_A 53 ------------------------VDEATADFKVFAALADVIILAVPIKKTIDFIKILADLDLKE---DVIITDAGSTKY 105 (290)
T ss_dssp ------------------------CSEEESCTTTTGGGCSEEEECSCHHHHHHHHHHHHTSCCCT---TCEEECCCSCHH
T ss_pred ------------------------cccccCCHHHhhcCCCEEEEcCCHHHHHHHHHHHHhcCCCC---CCEEEECCCCch
Confidence 0134566767788999999999999999999999888 876 677775543322
Q ss_pred cccccccccCCHHHHHHhHhCCCCccEE--------EEeCCCcHH-HHhccCceEEEEe--CChhhHHHHHHHhcCCCeE
Q 022050 202 AELEAVPRIITPTQMINRATGVPIENIL--------YLGGPNIAS-EIYNKEYANARIC--GAEKWRKPLAKFLRRPHFT 270 (303)
Q Consensus 202 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~--------v~~GP~~a~-ev~~g~~~~~~~~--~~~~~~~~i~~lf~~~g~~ 270 (303)
.. .+.+.+.++.....+. ..+||..+. ++..+.+..++.. .+.+..+.++++|+..|++
T Consensus 106 ~~----------~~~l~~~l~~~~~~~v~~~P~~g~~~~g~~~a~~~l~~g~~~~~~~~~~~~~~~~~~v~~l~~~~G~~ 175 (290)
T 3b1f_A 106 EI----------VRAAEYYLKDKPVQFVGSHPMAGSHKSGAVAANVNLFENAYYIFSPSCLTKPNTIPALQDLLSGLHAR 175 (290)
T ss_dssp HH----------HHHHHHHHTTSSCEEEEEEEC-----CCTTSCCTTTTTTSEEEEEECTTCCTTHHHHHHHHTGGGCCE
T ss_pred HH----------HHHHHHhccccCCEEEEeCCcCCCCcchHHHhhHHHhCCCeEEEecCCCCCHHHHHHHHHHHHHcCCE
Confidence 11 1345555542111111 122555443 4445554444432 4556789999999999999
Q ss_pred EEecCC
Q 022050 271 VWDNGD 276 (303)
Q Consensus 271 ~~~~~D 276 (303)
++..++
T Consensus 176 ~~~~~~ 181 (290)
T 3b1f_A 176 YVEIDA 181 (290)
T ss_dssp EEECCH
T ss_pred EEEcCH
Confidence 876554
No 65
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=99.48 E-value=1.9e-13 Score=134.55 Aligned_cols=186 Identities=10% Similarity=0.052 Sum_probs=119.8
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhcC
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (303)
|||+|||+|+||+++|..|+++ | ++|++|+|++++++++++++ + + . +.-
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~-G-----~~V~v~dr~~~~~~~l~~~~-------g---------~--~-~~~------ 50 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEK-G-----FKVAVFNRTYSKSEEFMKAN-------A---------S--A-PFA------ 50 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSHHHHHHHHHHT-------T---------T--S-TTG------
T ss_pred CEEEEEChHHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHHHHHhc-------C---------C--C-CCC------
Confidence 7999999999999999999999 8 89999999988776533110 0 0 0 000
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhc---CCCEEEEecCch-hHHHHHHHHHHHhhccCCCCEEEEeecc
Q 022050 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW---DADIVINGLPST-ETKEVFEEISRYWKERITVPVIISLAKG 199 (303)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~---~aDlVIiaVp~~-~~~~vl~~l~~~l~~~~~~~iivs~~nG 199 (303)
.++..+++++++++ ++|+||++||+. .++++++++.+++++ +++||+.+||
T Consensus 51 ----------------------~~i~~~~~~~e~v~~l~~aDvVilaVp~~~~v~~vl~~l~~~l~~---g~iIId~sng 105 (478)
T 1pgj_A 51 ----------------------GNLKAFETMEAFAASLKKPRKALILVQAGAATDSTIEQLKKVFEK---GDILVDTGNA 105 (478)
T ss_dssp ----------------------GGEEECSCHHHHHHHBCSSCEEEECCCCSHHHHHHHHHHHHHCCT---TCEEEECCCC
T ss_pred ----------------------CCeEEECCHHHHHhcccCCCEEEEecCChHHHHHHHHHHHhhCCC---CCEEEECCCC
Confidence 13566778888776 499999999995 799999999999887 7899999988
Q ss_pred CccccccccccCCHHHHHHhHhCCCCccEEEEeCCCcH--HHHhccCceEEEEeCChhhHHHHHHHhcCCCeE-------
Q 022050 200 VEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIA--SEIYNKEYANARICGAEKWRKPLAKFLRRPHFT------- 270 (303)
Q Consensus 200 i~~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a--~ev~~g~~~~~~~~~~~~~~~~i~~lf~~~g~~------- 270 (303)
..... +.+.+.+.... +..+.+|... .....|. . ++.+++.+..+.++.+|+..+.+
T Consensus 106 ~~~~~----------~~l~~~l~~~g--~~~v~~pv~gg~~~a~~g~-~-i~~gg~~~~~~~v~~ll~~~g~~~~dg~~~ 171 (478)
T 1pgj_A 106 HFKDQ----------GRRAQQLEAAG--LRFLGMGISGGEEGARKGP-A-FFPGGTLSVWEEIRPIVEAAAAKADDGRPC 171 (478)
T ss_dssp CHHHH----------HHHHHHHHTTT--CEEEEEEEESHHHHHHHCC-E-EEEEECHHHHHHHHHHHHHHSCBCTTSCBS
T ss_pred ChHHH----------HHHHHHHHHCC--CeEEEeeccCCHHHHhcCC-e-EeccCCHHHHHHHHHHHHHhcccccCCCee
Confidence 76531 12333332111 1112223221 1222343 2 33455666778888888766655
Q ss_pred EEecCChhHHHHHHHHHHHHH--HHHHHHhh
Q 022050 271 VWDNGDLVTHEVMGGLKNVYA--IGAGTIYF 299 (303)
Q Consensus 271 ~~~~~Di~g~e~~~~lkNv~A--i~~G~~~g 299 (303)
+....+.-...+.+..-|.+. +..++.|.
T Consensus 172 v~~~g~~G~g~~~Kl~~N~~~~~~~~~i~Ea 202 (478)
T 1pgj_A 172 VTMNGSGGAGSCVKMYHNSGEYAILQIWGEV 202 (478)
T ss_dssp CCCCCSTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCchHHHHHhhHHHHHHHHHHHHHHHH
Confidence 333444444457777778542 33455443
No 66
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=99.48 E-value=2e-13 Score=133.95 Aligned_cols=198 Identities=14% Similarity=0.120 Sum_probs=128.7
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
+|||+|||+|.||..+|..|+++ | .+++|++||+++++++.++..+ .+.+.+++.
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~-g---~G~~V~~~d~~~~~~~~l~~g~-----------------~~i~e~~l~---- 59 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHM-C---PEIRVTVVDVNESRINAWNSPT-----------------LPIYEPGLK---- 59 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHH-C---TTSEEEEECSCHHHHHHHTSSS-----------------CSSCCTTHH----
T ss_pred ccEEEEECCCHHHHHHHHHHHhc-C---CCCEEEEEECCHHHHHHHhCCC-----------------CCcCCCCHH----
Confidence 58999999999999999999987 4 1178999999998877654221 122222221
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh---------------HHHHHHHHHHHhhcc
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE---------------TKEVFEEISRYWKER 187 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~---------------~~~vl~~l~~~l~~~ 187 (303)
+.+..+. ..++.+++|+.+++++||+||+|||... +.++++++.+++++
T Consensus 60 -------~~~~~~~--------~~~~~~t~~~~e~~~~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~- 123 (467)
T 2q3e_A 60 -------EVVESCR--------GKNLFFSTNIDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNG- 123 (467)
T ss_dssp -------HHHHHHB--------TTTEEEESCHHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCS-
T ss_pred -------HHHHHhh--------cCCEEEECCHHHHHhcCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCC-
Confidence 0000000 0157788999888899999999997643 57888889888876
Q ss_pred CCCCEEEEeeccCccccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHHHhc----cCceEEEEeC-----ChhhHH
Q 022050 188 ITVPVIISLAKGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYN----KEYANARICG-----AEKWRK 258 (303)
Q Consensus 188 ~~~~iivs~~nGi~~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~ev~~----g~~~~~~~~~-----~~~~~~ 258 (303)
+++||.. +.+.+.+ ...+.+.+.+.. .....+.+..+|.++.+... ..+..++++. +.+..+
T Consensus 124 --g~iVV~~-STv~~g~-----~~~l~~~l~~~~-~~~~d~~V~~~Pe~~~~G~~~~d~~~~~rivvGg~~~~~~~~~~~ 194 (467)
T 2q3e_A 124 --YKIVTEK-STVPVRA-----AESIRRIFDANT-KPNLNLQVLSNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQ 194 (467)
T ss_dssp --EEEEEEC-SCCCTTH-----HHHHHHHHHHTC-CTTCEEEEEECCCCCCTTSHHHHHHSCSCEEEECCSSHHHHHHHH
T ss_pred --CCEEEEC-CcCCchH-----HHHHHHHHHHhC-CCCCCeEEEeCHHHhhcccchhhccCCCEEEECCCCCCCCHHHHH
Confidence 6666543 3444431 122333343321 11123456788888654321 1232244444 445788
Q ss_pred HHHHHhcCC-CeEEEecCChhHHHHHHHHHHHH
Q 022050 259 PLAKFLRRP-HFTVWDNGDLVTHEVMGGLKNVY 290 (303)
Q Consensus 259 ~i~~lf~~~-g~~~~~~~Di~g~e~~~~lkNv~ 290 (303)
.++++|+.. +..++...|+...||.|.+-|.+
T Consensus 195 ~~~~l~~~~~g~~~~~~~~~~~ae~~Kl~~N~~ 227 (467)
T 2q3e_A 195 ALCAVYEHWVPREKILTTNTWSSELSKLAANAF 227 (467)
T ss_dssp HHHHHHTTTSCGGGEEEECHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCeEEecCHHHHHHHHHHHHHH
Confidence 999999876 55566677899999999999986
No 67
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=99.47 E-value=1.7e-13 Score=135.58 Aligned_cols=184 Identities=11% Similarity=0.035 Sum_probs=122.3
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
..||+|||+|+||+++|..|+++ | ++|++|+|++++++++++. . .++
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~-G-----~~V~v~dr~~~~~~~l~~~--------~-------------~~~------ 56 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADH-G-----FTVCAYNRTQSKVDHFLAN--------E-------------AKG------ 56 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSSHHHHHHHHT--------T-------------TTT------
T ss_pred CCCEEEEeeHHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHHHHcc--------c-------------ccC------
Confidence 36899999999999999999999 9 8999999999877643210 0 000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcC---CCEEEEecCc-hhHHHHHHHHHHHhhccCCCCEEEEeec
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWD---ADIVINGLPS-TETKEVFEEISRYWKERITVPVIISLAK 198 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~---aDlVIiaVp~-~~~~~vl~~l~~~l~~~~~~~iivs~~n 198 (303)
.++..++++++++++ +|+||++||+ +.++++++++.+++++ +++||++++
T Consensus 57 -----------------------~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~~vl~~l~~~l~~---g~iIId~s~ 110 (497)
T 2p4q_A 57 -----------------------KSIIGATSIEDFISKLKRPRKVMLLVKAGAPVDALINQIVPLLEK---GDIIIDGGN 110 (497)
T ss_dssp -----------------------SSEECCSSHHHHHHTSCSSCEEEECCCSSHHHHHHHHHHGGGCCT---TCEEEECSC
T ss_pred -----------------------CCeEEeCCHHHHHhcCCCCCEEEEEcCChHHHHHHHHHHHHhCCC---CCEEEECCC
Confidence 035556788887776 9999999999 5899999999999887 789999998
Q ss_pred cCccccccccccCCHHHHHHhHhCCCCccEEEEeCC--CcHHHHhccCceEEEEeCChhhHHHHHHHhcCCCeE------
Q 022050 199 GVEAELEAVPRIITPTQMINRATGVPIENILYLGGP--NIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFT------ 270 (303)
Q Consensus 199 Gi~~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP--~~a~ev~~g~~~~~~~~~~~~~~~~i~~lf~~~g~~------ 270 (303)
+..... ....+.+.+ .+. . .+.+| +.+.....|. .++.+++.+..+.++.+|+.-+.+
T Consensus 111 ~~~~~~------~~l~~~l~~-~g~---~--~v~~pVsgg~~~a~~G~--~im~gg~~e~~~~v~~ll~~~g~~~dGe~~ 176 (497)
T 2p4q_A 111 SHFPDS------NRRYEELKK-KGI---L--FVGSGVSGGEEGARYGP--SLMPGGSEEAWPHIKNIFQSISAKSDGEPC 176 (497)
T ss_dssp CCHHHH------HHHHHHHHH-TTC---E--EEEEEEESHHHHHHHCC--EEEEEECGGGHHHHHHHHHHHSCEETTEES
T ss_pred CChhHH------HHHHHHHHH-cCC---c--eeCCCcccChhHhhcCC--eEEecCCHHHHHHHHHHHHHhcCccCCCCc
Confidence 866431 111222222 121 1 12233 2222233443 234456677788888888876665
Q ss_pred EEecCChhHHHHHHHHHHHHH--HHHHHHhh
Q 022050 271 VWDNGDLVTHEVMGGLKNVYA--IGAGTIYF 299 (303)
Q Consensus 271 ~~~~~Di~g~e~~~~lkNv~A--i~~G~~~g 299 (303)
+....+.-...+.|..-|.+. +..+++++
T Consensus 177 v~~vg~~G~g~~~Kl~~N~~~~~~~~~laEa 207 (497)
T 2p4q_A 177 CEWVGPAGAGHYVKMVHNGIEYGDMQLICEA 207 (497)
T ss_dssp CCCCEETTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEECCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333334467788888863 45566665
No 68
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.47 E-value=2.9e-13 Score=133.01 Aligned_cols=182 Identities=12% Similarity=0.007 Sum_probs=123.1
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhcC
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (303)
|||+|||+|+||+++|..|+++ | ++|.+|+|++++++++.++ .++
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~-G-----~~V~v~dr~~~~~~~l~~~----------------------~~~------- 50 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESR-G-----YTVAIYNRTTSKTEEVFKE----------------------HQD------- 50 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSHHHHHHHHHH----------------------TTT-------
T ss_pred CcEEEEeeHHHHHHHHHHHHhC-C-----CEEEEEcCCHHHHHHHHHh----------------------CcC-------
Confidence 7899999999999999999999 8 8999999998876542210 000
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcC---CCEEEEecCc-hhHHHHHHHHHHHhhccCCCCEEEEeecc
Q 022050 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWD---ADIVINGLPS-TETKEVFEEISRYWKERITVPVIISLAKG 199 (303)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~---aDlVIiaVp~-~~~~~vl~~l~~~l~~~~~~~iivs~~nG 199 (303)
.++..++++++++++ +|+||++||+ +.++++++++.+++++ +++||++++|
T Consensus 51 ----------------------~gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~~vl~~l~~~l~~---g~iiId~s~~ 105 (474)
T 2iz1_A 51 ----------------------KNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDATIKSLLPLLDI---GDILIDGGNT 105 (474)
T ss_dssp ----------------------SCEEECSSHHHHHHTBCSSCEEEECCCTTHHHHHHHHHHGGGCCT---TCEEEECSCC
T ss_pred ----------------------CCeEEeCCHHHHHhhccCCCEEEEEccCchHHHHHHHHHHhhCCC---CCEEEECCCC
Confidence 135566788887765 9999999999 5799999999998887 7899999888
Q ss_pred CccccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHH--HHhccCceEEEEeCChhhHHHHHHHhcCCCeE-------
Q 022050 200 VEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIAS--EIYNKEYANARICGAEKWRKPLAKFLRRPHFT------- 270 (303)
Q Consensus 200 i~~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~--ev~~g~~~~~~~~~~~~~~~~i~~lf~~~g~~------- 270 (303)
..... +.+.+.+.... +..+.+|.... ....|. . ++.+++.+..+.++.+|+.-+.+
T Consensus 106 ~~~~~----------~~l~~~l~~~g--~~~v~~pv~gg~~~a~~g~-~-i~~gg~~~~~~~v~~ll~~~g~~~~~dge~ 171 (474)
T 2iz1_A 106 HFPDT----------MRRNAELADSG--INFIGTGVSGGEKGALLGP-S-MMPGGQKEAYDLVAPIFEQIAAKAPQDGKP 171 (474)
T ss_dssp CHHHH----------HHHHHHTTTSS--CEEEEEEECSHHHHHHHCC-C-EEEEECHHHHHHHHHHHHHHSCBCTTTCCB
T ss_pred CHHHH----------HHHHHHHHHCC--CeEECCCCCCChhhhccCC-e-EEecCCHHHHHHHHHHHHHHhcccccCCCc
Confidence 75431 22444443211 22334444322 223443 3 33455667778888888766655
Q ss_pred -EEecCChhHHHHHHHHHHHH--HHHHHHHhh
Q 022050 271 -VWDNGDLVTHEVMGGLKNVY--AIGAGTIYF 299 (303)
Q Consensus 271 -~~~~~Di~g~e~~~~lkNv~--Ai~~G~~~g 299 (303)
+....+.-...|.|..-|.+ .+..++.+.
T Consensus 172 ~~~~~g~~g~g~~~Kl~~N~~~~~~~~~laEa 203 (474)
T 2iz1_A 172 CVAYMGANGAGHYVKMVHNGIEYGDMQLIAES 203 (474)
T ss_dssp SBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEECCccHHHHHHHHHhHHHHHHHHHHHHH
Confidence 33344444557778888876 345556555
No 69
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.47 E-value=4.8e-13 Score=127.16 Aligned_cols=179 Identities=13% Similarity=0.086 Sum_probs=119.9
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
.|||+|||+|.||..+|..|+++ | ++|++|+|++++++++.+.
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~-G-----~~V~v~dr~~~~~~~l~~~------------------------------- 64 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKG-G-----HECVVYDLNVNAVQALERE------------------------------- 64 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHHHHHHTT-------------------------------
T ss_pred CCEEEEECchHHHHHHHHHHHhC-C-----CEEEEEeCCHHHHHHHHHC-------------------------------
Confidence 48999999999999999999999 9 8999999998766532110
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCC---CEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeecc
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDA---DIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~a---DlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nG 199 (303)
.+..+++++++++++ |+||++||+..++++++++.+.+++ +++||+.+++
T Consensus 65 ------------------------g~~~~~s~~e~~~~a~~~DvVi~~vp~~~v~~vl~~l~~~l~~---g~iiId~st~ 117 (358)
T 4e21_A 65 ------------------------GIAGARSIEEFCAKLVKPRVVWLMVPAAVVDSMLQRMTPLLAA---NDIVIDGGNS 117 (358)
T ss_dssp ------------------------TCBCCSSHHHHHHHSCSSCEEEECSCGGGHHHHHHHHGGGCCT---TCEEEECSSC
T ss_pred ------------------------CCEEeCCHHHHHhcCCCCCEEEEeCCHHHHHHHHHHHHhhCCC---CCEEEeCCCC
Confidence 233456778888888 9999999999999999999998887 7888887766
Q ss_pred CccccccccccCCHHHHHHhHh-CCCCc--cEEEEeCCCcHHHHhccCceEEEEeCChhhHHHHHHHhcCCC--------
Q 022050 200 VEAELEAVPRIITPTQMINRAT-GVPIE--NILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPH-------- 268 (303)
Q Consensus 200 i~~~~~~~~~~~~~~~~i~~~l-~~~~~--~~~v~~GP~~a~ev~~g~~~~~~~~~~~~~~~~i~~lf~~~g-------- 268 (303)
..... +.+.+.+ ....+ ..-+..||..+. .|. .++++++.+..+.++.+|+.-+
T Consensus 118 ~~~~~----------~~~~~~l~~~g~~~vdapVsGg~~~a~---~G~--~im~GG~~~a~~~~~~ll~~lg~~~~~~~~ 182 (358)
T 4e21_A 118 HYQDD----------IRRADQMRAQGITYVDVGTSGGIFGLE---RGY--CLMIGGEKQAVERLDPVFRTLAPGIGAAPR 182 (358)
T ss_dssp CHHHH----------HHHHHHHHTTTCEEEEEEEECGGGHHH---HCC--EEEEESCHHHHHHTHHHHHHHSCCGGGSCC
T ss_pred ChHHH----------HHHHHHHHHCCCEEEeCCCCCCHHHHh---cCC--eeeecCCHHHHHHHHHHHHHhccccccCcc
Confidence 43321 1122222 11111 112333443332 343 3445667766677777766444
Q ss_pred ------------eEEEecCChhHHHHHHHHHHH--HHHHHHHHhhh
Q 022050 269 ------------FTVWDNGDLVTHEVMGGLKNV--YAIGAGTIYFL 300 (303)
Q Consensus 269 ------------~~~~~~~Di~g~e~~~~lkNv--~Ai~~G~~~gl 300 (303)
-.+....+.-.-++.+.+-|. ++..+++++|+
T Consensus 183 ~~~~~~~~~~~~~~~~~~G~~G~g~~~Kl~~n~l~~~~i~~~aE~~ 228 (358)
T 4e21_A 183 TPGREKREGTAELGYLHCGPSGAGHFVKMVHNGIEYGLMAAYAEGL 228 (358)
T ss_dssp CTTGGGCCSSGGGTEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccceEEECCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 234444556677888999885 44555666654
No 70
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=99.47 E-value=7.3e-13 Score=116.77 Aligned_cols=164 Identities=12% Similarity=0.128 Sum_probs=112.8
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
.+|||+|||+|.||.+++..|++. | ++|++|+|++++.+++. ..
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~-g-----~~V~~~~r~~~~~~~~~------------------------~~------ 70 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGS-G-----FKVVVGSRNPKRTARLF------------------------PS------ 70 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESSHHHHHHHS------------------------BT------
T ss_pred CCCEEEEEccCHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHHHH------------------------Hc------
Confidence 358999999999999999999998 8 89999999976543210 00
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeeccCc
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nGi~ 201 (303)
++..+ ++.++++++|+||+++|++.++++++ +.+++ + +++++++++|+.
T Consensus 71 -------------------------g~~~~-~~~~~~~~~DvVi~av~~~~~~~v~~-l~~~~-~---~~~vv~~s~g~~ 119 (215)
T 2vns_A 71 -------------------------AAQVT-FQEEAVSSPEVIFVAVFREHYSSLCS-LSDQL-A---GKILVDVSNPTE 119 (215)
T ss_dssp -------------------------TSEEE-EHHHHTTSCSEEEECSCGGGSGGGGG-GHHHH-T---TCEEEECCCCCH
T ss_pred -------------------------CCcee-cHHHHHhCCCEEEECCChHHHHHHHH-HHHhc-C---CCEEEEeCCCcc
Confidence 23333 57777889999999999988777775 66666 4 789999999987
Q ss_pred cccccccccCCHHHHHHhHhCCCCccEEEEeCCCc--HHHHh----ccCceEEEEeCChhhHHHHHHHhcCCCeEEEecC
Q 022050 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNI--ASEIY----NKEYANARICGAEKWRKPLAKFLRRPHFTVWDNG 275 (303)
Q Consensus 202 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~--a~ev~----~g~~~~~~~~~~~~~~~~i~~lf~~~g~~~~~~~ 275 (303)
.... .......+++.+.++. .++ +... |+ +.... .+.+.....+.+.+..+.++++|+..|++++...
T Consensus 120 ~~~l--~~~~~~~~~l~~~l~~--~~v-v~~~-n~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~~ll~~~G~~~~~~g 193 (215)
T 2vns_A 120 QEHL--QHRESNAEYLASLFPT--CTV-VKAF-NVISAWTLQAGPRDGNRQVPICGDQPEAKRAVSEMALAMGFMPVDMG 193 (215)
T ss_dssp HHHH--HCSSCHHHHHHHHCTT--SEE-EEEC-TTBCHHHHHTCSCSSCCEEEEEESCHHHHHHHHHHHHHTTCEEEECC
T ss_pred cccc--cccccHHHHHHHHCCC--CeE-Eecc-ccccHhHhcccccCCceeEEEecCCHHHHHHHHHHHHHcCCceEeec
Confidence 6421 1123456777777753 222 2222 22 11112 2222223335567788999999999999999888
Q ss_pred Chh
Q 022050 276 DLV 278 (303)
Q Consensus 276 Di~ 278 (303)
++-
T Consensus 194 ~~~ 196 (215)
T 2vns_A 194 SLA 196 (215)
T ss_dssp SGG
T ss_pred chh
Confidence 764
No 71
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=99.46 E-value=2.4e-12 Score=125.97 Aligned_cols=178 Identities=10% Similarity=0.047 Sum_probs=113.6
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
++||+|||+|.||+.||..|+++ | ++|++||+++++......+.+....+ .. .+...
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~a-G-----~~V~l~D~~~e~a~~~i~~~l~~~~~-----------~G-~l~~~----- 110 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLA-G-----IETFLVVRNEQRCKQELEVMYAREKS-----------FK-RLNDK----- 110 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHHHHHHHHHHHHHHH-----------TT-SCCHH-----
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-C-----CeEEEEECcHHHHHHHHHHHHHHHHH-----------cC-CCCHH-----
Confidence 47999999999999999999999 9 99999999987322100011100111 00 01000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch--hHHHHHHHHHHHhhccCCCCEEEEeeccC
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST--ETKEVFEEISRYWKERITVPVIISLAKGV 200 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~--~~~~vl~~l~~~l~~~~~~~iivs~~nGi 200 (303)
+. +..+.++++++|++ ++++||+||+|||+. .+++++++|.+++++ +++|+|+++++
T Consensus 111 -------~~----------~~~~~~i~~t~dl~-al~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~---~aIlasnTSsl 169 (460)
T 3k6j_A 111 -------RI----------EKINANLKITSDFH-KLSNCDLIVESVIEDMKLKKELFANLENICKS---TCIFGTNTSSL 169 (460)
T ss_dssp -------HH----------HHHHTTEEEESCGG-GCTTCSEEEECCCSCHHHHHHHHHHHHTTSCT---TCEEEECCSSS
T ss_pred -------HH----------HHHhcceEEeCCHH-HHccCCEEEEcCCCCHHHHHHHHHHHHhhCCC---CCEEEecCCCh
Confidence 00 00013688889985 689999999999985 578899999999988 89999999887
Q ss_pred ccccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHHHhccCceEEEEe--CChhhHHHHHHHhcCCCeEEEecCChh
Q 022050 201 EAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARIC--GAEKWRKPLAKFLRRPHFTVWDNGDLV 278 (303)
Q Consensus 201 ~~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~ev~~g~~~~~~~~--~~~~~~~~i~~lf~~~g~~~~~~~Di~ 278 (303)
... .+.+.+..|. .+.. ..|..+.. ......++.+ .+++..+.+..+++.-|..++...|..
T Consensus 170 ~i~------------~ia~~~~~p~-r~iG-~HffnPv~--~m~LvEIv~g~~Ts~e~~~~~~~l~~~lGk~~v~v~d~p 233 (460)
T 3k6j_A 170 DLN------------EISSVLRDPS-NLVG-IHFFNPAN--VIRLVEIIYGSHTSSQAIATAFQACESIKKLPVLVGNCK 233 (460)
T ss_dssp CHH------------HHHTTSSSGG-GEEE-EECCSSTT--TCCEEEEECCSSCCHHHHHHHHHHHHHTTCEEEEESSCC
T ss_pred hHH------------HHHHhccCCc-ceEE-EEecchhh--hCCEEEEEeCCCCCHHHHHHHHHHHHHhCCEEEEEeccc
Confidence 764 2444444331 2211 11211211 1112223333 356678888899988888887777766
Q ss_pred HH
Q 022050 279 TH 280 (303)
Q Consensus 279 g~ 280 (303)
|-
T Consensus 234 Gf 235 (460)
T 3k6j_A 234 SF 235 (460)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 72
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.45 E-value=2.2e-12 Score=120.36 Aligned_cols=185 Identities=12% Similarity=0.007 Sum_probs=121.2
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
+|||+|||+|.||.++|..|+++ |. ++|++|+|+++..++... ..+ .+..
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~-G~----~~V~~~dr~~~~~~~~~~-----~~~--------------~~~~------ 73 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGR-NA----ARLAAYDLRFNDPAASGA-----LRA--------------RAAE------ 73 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-TC----SEEEEECGGGGCTTTHHH-----HHH--------------HHHH------
T ss_pred CCeEEEECccHHHHHHHHHHHHc-CC----CeEEEEeCCCccccchHH-----HHH--------------HHHH------
Confidence 48999999999999999999998 71 689999999843322110 000 0000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEec-CHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeeccCc
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVT-NLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~-d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nGi~ 201 (303)
..+ ++ ++.+++++||+||++||+....+.++++.+.+++ +++||+.+ ++.
T Consensus 74 -----------------------~g~--~~~s~~e~~~~aDvVi~avp~~~~~~~~~~i~~~l~~---~~ivv~~s-t~~ 124 (317)
T 4ezb_A 74 -----------------------LGV--EPLDDVAGIACADVVLSLVVGAATKAVAASAAPHLSD---EAVFIDLN-SVG 124 (317)
T ss_dssp -----------------------TTC--EEESSGGGGGGCSEEEECCCGGGHHHHHHHHGGGCCT---TCEEEECC-SCC
T ss_pred -----------------------CCC--CCCCHHHHHhcCCEEEEecCCHHHHHHHHHHHhhcCC---CCEEEECC-CCC
Confidence 023 34 6778889999999999999888888899888877 77887765 444
Q ss_pred cccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHHHhccCceEEEEeCChhhHHHHHHHhcCCCeEEEecCC-hhHH
Q 022050 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGD-LVTH 280 (303)
Q Consensus 202 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~ev~~g~~~~~~~~~~~~~~~~i~~lf~~~g~~~~~~~D-i~g~ 280 (303)
+.+ ...+.+.+.+. +.. .--.-++||..+. .+... ++++++.+ +.++.+|+.-+.+++...+ +-..
T Consensus 125 p~~-----~~~~~~~l~~~-g~~-~~d~pv~g~~~a~---~g~l~-i~vgg~~~--~~~~~ll~~~g~~v~~~g~~~g~a 191 (317)
T 4ezb_A 125 PDT-----KALAAGAIATG-KGS-FVEGAVMARVPPY---AEKVP-ILVAGRRA--VEVAERLNALGMNLEAVGETPGQA 191 (317)
T ss_dssp HHH-----HHHHHHHHHTS-SCE-EEEEEECSCSTTT---GGGSE-EEEESTTH--HHHHHHHHTTTCEEEEEESSTTHH
T ss_pred HHH-----HHHHHHHHHHc-CCe-EEeccCCCCchhh---cCCEE-EEEeCChH--HHHHHHHHHhCCCeEEeCCCcCHH
Confidence 431 11222222221 111 0013467876543 33333 33444444 8889999988988877665 8999
Q ss_pred HHHHHHHHHHH--HHHHHHhh
Q 022050 281 EVMGGLKNVYA--IGAGTIYF 299 (303)
Q Consensus 281 e~~~~lkNv~A--i~~G~~~g 299 (303)
++.|..-|.+. ..+++.|.
T Consensus 192 ~~~Kl~~N~~~~~~~~~~~E~ 212 (317)
T 4ezb_A 192 SSLKMIRSVMIKGVEALLIEA 212 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 99999999864 33444443
No 73
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.44 E-value=1.5e-12 Score=120.21 Aligned_cols=161 Identities=20% Similarity=0.198 Sum_probs=106.6
Q ss_pred CceEEEEC-CChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 43 PLRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 43 ~~kI~VIG-aG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
++||+||| +|+||+++|..|++. | ++|++|+|+++.
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~-G-----~~V~~~~~~~~~------------------------------------- 57 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRAS-G-----YPISILDREDWA------------------------------------- 57 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTT-T-----CCEEEECTTCGG-------------------------------------
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhC-C-----CeEEEEECCccc-------------------------------------
Confidence 46999999 999999999999998 8 899999987531
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeeccCc
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nGi~ 201 (303)
++.+++++||+||+|||++.+.++++++.+++++ +++|+. ..|+.
T Consensus 58 -------------------------------~~~~~~~~aDvVilavp~~~~~~vl~~l~~~l~~---~~iv~~-~~svk 102 (298)
T 2pv7_A 58 -------------------------------VAESILANADVVIVSVPINLTLETIERLKPYLTE---NMLLAD-LTSVK 102 (298)
T ss_dssp -------------------------------GHHHHHTTCSEEEECSCGGGHHHHHHHHGGGCCT---TSEEEE-CCSCC
T ss_pred -------------------------------CHHHHhcCCCEEEEeCCHHHHHHHHHHHHhhcCC---CcEEEE-CCCCC
Confidence 1234567899999999999999999999988877 665554 44443
Q ss_pred cccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHHHhccCceEEEEeCChhhHHHHHHHhcCCCeEEEecCChhHHH
Q 022050 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDLVTHE 281 (303)
Q Consensus 202 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~ev~~g~~~~~~~~~~~~~~~~i~~lf~~~g~~~~~~~Di~g~e 281 (303)
.. ..+.+.+.++....+..-+.||.. +...+.+..++...+.+..+.++++|+..|++++..++....+
T Consensus 103 ~~---------~~~~~~~~~~~~~v~~hP~~g~~~--~~~~g~~~~l~~~~~~~~~~~v~~l~~~~G~~~~~~~~~~~d~ 171 (298)
T 2pv7_A 103 RE---------PLAKMLEVHTGAVLGLHPMFGADI--ASMAKQVVVRCDGRFPERYEWLLEQIQIWGAKIYQTNATEHDH 171 (298)
T ss_dssp HH---------HHHHHHHHCSSEEEEEEECSCTTC--SCCTTCEEEEEEEECGGGTHHHHHHHHHTTCEEEECCHHHHHH
T ss_pred cH---------HHHHHHHhcCCCEEeeCCCCCCCc--hhhcCCeEEEecCCCHHHHHHHHHHHHHcCCEEEECCHHHHHH
Confidence 32 112233333211000112345554 2334544333333356678899999999999988766555455
Q ss_pred HHHH---HHHHHHH
Q 022050 282 VMGG---LKNVYAI 292 (303)
Q Consensus 282 ~~~~---lkNv~Ai 292 (303)
+.+. +..++|+
T Consensus 172 ~~a~~~~~p~~~a~ 185 (298)
T 2pv7_A 172 NMTYIQALRHFSTF 185 (298)
T ss_dssp HHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 5544 4444433
No 74
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=99.13 E-value=1.6e-14 Score=126.64 Aligned_cols=165 Identities=13% Similarity=0.089 Sum_probs=112.1
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
.|||+|||+|+||.++|..|++. | ++|++|+|+++ .+.+ ..
T Consensus 19 ~~~I~iIG~G~mG~~la~~L~~~-G-----~~V~~~~r~~~-~~~~--------------------------~~------ 59 (201)
T 2yjz_A 19 QGVVCIFGTGDFGKSLGLKMLQC-G-----YSVVFGSRNPQ-VSSL--------------------------LP------ 59 (201)
Confidence 37899999999999999999998 8 89999999875 3210 00
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeeccCcc
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nGi~~ 202 (303)
..+.++ ++.++++++|+||++||++.+++++ ++.+.. + +++||++++|+..
T Consensus 60 -----------------------~g~~~~-~~~~~~~~aDvVilav~~~~~~~v~-~l~~~~-~---~~ivI~~~~G~~~ 110 (201)
T 2yjz_A 60 -----------------------RGAEVL-CYSEAASRSDVIVLAVHREHYDFLA-ELADSL-K---GRVLIDVSNNQKM 110 (201)
Confidence 012233 4556778999999999999888887 565543 3 6799999999964
Q ss_pred ccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHHHhc-cCc----eEEEEeCChhhHHHHHHHhcCCCeEEEecCCh
Q 022050 203 ELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYN-KEY----ANARICGAEKWRKPLAKFLRRPHFTVWDNGDL 277 (303)
Q Consensus 203 ~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~ev~~-g~~----~~~~~~~~~~~~~~i~~lf~~~g~~~~~~~Di 277 (303)
... ...-.+.+.+.++.. .++..+|+++..... |.. ..++.+.+.+..+.+..+|+..|++++...++
T Consensus 111 ~~~----~~~~~~~l~~~~~~~---~vvra~~n~~a~~~~~g~l~g~~~~~~~g~~~~~~~~v~~ll~~~G~~~~~~G~l 183 (201)
T 2yjz_A 111 NQY----PESNAEYLAQLVPGA---HVVKAFNTISAWALQSGTLDASRQVFVCGNDSKAKDRVMDIARTLGLTPLDQGSL 183 (201)
Confidence 210 000123466666431 356788888776654 321 11223445567889999999999998876665
Q ss_pred hHHHH
Q 022050 278 VTHEV 282 (303)
Q Consensus 278 ~g~e~ 282 (303)
-...|
T Consensus 184 ~~a~~ 188 (201)
T 2yjz_A 184 VAAKE 188 (201)
Confidence 43333
No 75
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.41 E-value=1e-11 Score=111.82 Aligned_cols=170 Identities=15% Similarity=0.159 Sum_probs=107.3
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEec--CCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRR--PGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r--~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
|||+|||+|+||+++|..|+++ | ++|++|+| +++.++++ ...
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~-g-----~~V~~~~~~~~~~~~~~~--------------------------~~~---- 44 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSR-G-----VEVVTSLEGRSPSTIERA--------------------------RTV---- 44 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT-T-----CEEEECCTTCCHHHHHHH--------------------------HHH----
T ss_pred CeEEEEechHHHHHHHHHHHHC-C-----CeEEEeCCccCHHHHHHH--------------------------HHC----
Confidence 6999999999999999999998 8 89999988 33332211 000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeeccCc
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nGi~ 201 (303)
.+. +++.++++++|+||++||++...+.+.++.+.++ + ++++. +++.
T Consensus 45 -------------------------g~~--~~~~~~~~~aDvvi~~v~~~~~~~~~~~~~~~~~----~-~vi~~-s~~~ 91 (264)
T 1i36_A 45 -------------------------GVT--ETSEEDVYSCPVVISAVTPGVALGAARRAGRHVR----G-IYVDI-NNIS 91 (264)
T ss_dssp -------------------------TCE--ECCHHHHHTSSEEEECSCGGGHHHHHHHHHTTCC----S-EEEEC-SCCC
T ss_pred -------------------------CCc--CCHHHHHhcCCEEEEECCCHHHHHHHHHHHHhcC----c-EEEEc-cCCC
Confidence 123 4566778899999999999865555566665443 4 55554 5655
Q ss_pred cccccccccCCHHHHHHhHhCCCCc-cEEEEeCCCcHHHHhccCceEEEEeCChhhHHHHHHHhcCCCeEEEe-cCChhH
Q 022050 202 AELEAVPRIITPTQMINRATGVPIE-NILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWD-NGDLVT 279 (303)
Q Consensus 202 ~~~~~~~~~~~~~~~i~~~l~~~~~-~~~v~~GP~~a~ev~~g~~~~~~~~~~~~~~~~i~~lf~~~g~~~~~-~~Di~g 279 (303)
+.. .+.+.+.++.... ..-+..+| .....|.+ ++.+++.. +.+++ |+..|.+++. .+++-.
T Consensus 92 ~~~---------~~~l~~~~~~~g~~~~~v~~~~---~~~~~g~~--~~~~g~~~--~~~~~-l~~~g~~~~~~~~~~g~ 154 (264)
T 1i36_A 92 PET---------VRMASSLIEKGGFVDAAIMGSV---RRKGADIR--IIASGRDA--EEFMK-LNRYGLNIEVRGREPGD 154 (264)
T ss_dssp HHH---------HHHHHHHCSSSEEEEEEECSCH---HHHGGGCE--EEEESTTH--HHHHG-GGGGTCEEEECSSSTTH
T ss_pred HHH---------HHHHHHHHhhCCeeeeeeeCCc---cccccCCe--EEecCCcH--HHhhh-HHHcCCeeEECCCCcCH
Confidence 431 1345666643210 11122333 23334544 33344333 78888 9988988655 444788
Q ss_pred HHHHHHHHHHH--HHHHHHHhh
Q 022050 280 HEVMGGLKNVY--AIGAGTIYF 299 (303)
Q Consensus 280 ~e~~~~lkNv~--Ai~~G~~~g 299 (303)
.+|.+..-|.+ .+..++.+.
T Consensus 155 ~~~~kl~~n~~~~~~~~~~~Ea 176 (264)
T 1i36_A 155 ASAIKMLRSSYTKGVSALLWET 176 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999976 344555554
No 76
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.41 E-value=2e-12 Score=127.33 Aligned_cols=188 Identities=14% Similarity=0.066 Sum_probs=121.2
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
.+|||+|||+|.||.++|..|+++ | ++|++|+|++++++.+.+++ ..+
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~-G-----~~V~v~dr~~~~~~~l~~~g---------------------~~g----- 50 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDH-G-----FVVCAFNRTVSKVDDFLANE---------------------AKG----- 50 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSTHHHHHHHHTT---------------------TTT-----
T ss_pred CCCEEEEEChhHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHHHHhcc---------------------cCC-----
Confidence 458999999999999999999999 9 89999999998776432110 000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc---CCCEEEEecCch-hHHHHHHHHHHHhhccCCCCEEEEee
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW---DADIVINGLPST-ETKEVFEEISRYWKERITVPVIISLA 197 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~---~aDlVIiaVp~~-~~~~vl~~l~~~l~~~~~~~iivs~~ 197 (303)
.++..+++++++++ ++|+||++||+. .++++++++.+++++ +++||...
T Consensus 51 ------------------------~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~~vl~~l~~~L~~---g~iIId~s 103 (484)
T 4gwg_A 51 ------------------------TKVVGAQSLKEMVSKLKKPRRIILLVKAGQAVDDFIEKLVPLLDT---GDIIIDGG 103 (484)
T ss_dssp ------------------------SSCEECSSHHHHHHTBCSSCEEEECSCSSHHHHHHHHHHGGGCCT---TCEEEECS
T ss_pred ------------------------CceeccCCHHHHHhhccCCCEEEEecCChHHHHHHHHHHHHhcCC---CCEEEEcC
Confidence 13455677888765 599999999995 899999999999987 78999888
Q ss_pred ccCccccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHHHhccCceEEEEeCChhhHHHHHHHhcCCCeEE------
Q 022050 198 KGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTV------ 271 (303)
Q Consensus 198 nGi~~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~ev~~g~~~~~~~~~~~~~~~~i~~lf~~~g~~~------ 271 (303)
++....+ ....+.+.+ .+......-+..||..+ ..|. .++++++.+..+.++.+|+.-+.++
T Consensus 104 t~~~~~t------~~~~~~l~~-~Gi~fvd~pVsGg~~gA---~~G~--~im~GG~~ea~~~v~pll~~ig~~v~~~~~~ 171 (484)
T 4gwg_A 104 NSEYRDT------TRRCRDLKA-KGILFVGSGVSGGEEGA---RYGP--SLMPGGNKEAWPHIKTIFQGIAAKVGTGEPC 171 (484)
T ss_dssp CCCHHHH------HHHHHHHHH-TTCEEEEEEEESHHHHH---HHCC--EEEEEECGGGHHHHHHHHHHHSCBCTTSCBS
T ss_pred CCCchHH------HHHHHHHHh-hccccccCCccCCHHHH---hcCC--eeecCCCHHHHHHHHHHHHHhcCcccCCCce
Confidence 7765431 111122222 12110011122233222 2343 3345566777788888887544433
Q ss_pred -EecCChhHHHHHHHHHHH--HHHHHHHHhhh
Q 022050 272 -WDNGDLVTHEVMGGLKNV--YAIGAGTIYFL 300 (303)
Q Consensus 272 -~~~~Di~g~e~~~~lkNv--~Ai~~G~~~gl 300 (303)
....+.=..+..|..-|. |+...+++|++
T Consensus 172 ~~~~G~~Gag~~vKmv~N~i~~~~m~~iaEa~ 203 (484)
T 4gwg_A 172 CDWVGDEGAGHFVKMVHNGIEYGDMQLICEAY 203 (484)
T ss_dssp BCCCEETTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 223334445788888887 44556666654
No 77
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.40 E-value=2.1e-12 Score=121.59 Aligned_cols=174 Identities=18% Similarity=0.186 Sum_probs=116.1
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
.|||+|||+|.||+++|..|+.. | ++|++|+|+++...+ ....
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~-G-----~~V~~~~~~~~~~~~-------------------------~a~~------ 58 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDS-G-----VDVTVGLRSGSATVA-------------------------KAEA------ 58 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHT-T-----CCEEEECCTTCHHHH-------------------------HHHH------
T ss_pred CCEEEEECchHHHHHHHHHHHHC-c-----CEEEEEECChHHHHH-------------------------HHHH------
Confidence 37899999999999999999998 8 899999998754211 0000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHH-HHHHHhhccCCCCEEEEeeccCc
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFE-EISRYWKERITVPVIISLAKGVE 201 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~-~l~~~l~~~~~~~iivs~~nGi~ 201 (303)
.++.++ ++.+++++||+||++||++...++++ ++.+++++ +++|+++ +|+.
T Consensus 59 -----------------------~G~~~~-~~~e~~~~aDvVilavp~~~~~~v~~~~i~~~l~~---~~ivi~~-~gv~ 110 (338)
T 1np3_A 59 -----------------------HGLKVA-DVKTAVAAADVVMILTPDEFQGRLYKEEIEPNLKK---GATLAFA-HGFS 110 (338)
T ss_dssp -----------------------TTCEEE-CHHHHHHTCSEEEECSCHHHHHHHHHHHTGGGCCT---TCEEEES-CCHH
T ss_pred -----------------------CCCEEc-cHHHHHhcCCEEEEeCCcHHHHHHHHHHHHhhCCC---CCEEEEc-CCch
Confidence 023344 77788899999999999999999998 99888887 7777754 5654
Q ss_pred cccccccccCCHHHHHHhHhCCCCccEEEE---eCCCcHH-HHhc---cCceEEEEe--CChhhHHHHHHHhcCCCe-E-
Q 022050 202 AELEAVPRIITPTQMINRATGVPIENILYL---GGPNIAS-EIYN---KEYANARIC--GAEKWRKPLAKFLRRPHF-T- 270 (303)
Q Consensus 202 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~---~GP~~a~-ev~~---g~~~~~~~~--~~~~~~~~i~~lf~~~g~-~- 270 (303)
.. +.+........ .+. .||.++. ++.. |.+..++.. .+.+..+.+.++++..|. +
T Consensus 111 ~~-------------~~~~~~~~~~~-vv~~~P~gp~~a~~~l~~~G~g~~~ii~~~~~~~~~a~~~~~~l~~~lG~~~a 176 (338)
T 1np3_A 111 IH-------------YNQVVPRADLD-VIMIAPKAPGHTVRSEFVKGGGIPDLIAIYQDASGNAKNVALSYACGVGGGRT 176 (338)
T ss_dssp HH-------------TTSSCCCTTCE-EEEEEESSCSHHHHHHHHTTCCCCEEEEEEECSSSCHHHHHHHHHHHTTHHHH
T ss_pred hH-------------HHhhcCCCCcE-EEeccCCCCchhHHHHHhccCCCeEEEEecCCCCHHHHHHHHHHHHHcCCCcc
Confidence 31 11211111111 122 5666643 3443 777665442 344567788888887777 3
Q ss_pred -EEec-------CChhHH--HHHHHHHHHHHHHHH
Q 022050 271 -VWDN-------GDLVTH--EVMGGLKNVYAIGAG 295 (303)
Q Consensus 271 -~~~~-------~Di~g~--e~~~~lkNv~Ai~~G 295 (303)
+... .|..+. -+||.+.+++|.+..
T Consensus 177 gv~~~~~~~~~~~~~~~s~~~l~G~lp~~ia~~~e 211 (338)
T 1np3_A 177 GIIETTFKDETETDLFGEQAVLCGGCVELVKAGFE 211 (338)
T ss_dssp CEEECCHHHHHHHHHHHHHHTTTHHHHHHHHHHHH
T ss_pred ceEeechhcccchHHHHHHHHHhhhHHHHHHHHHH
Confidence 3332 234553 388899999988763
No 78
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=99.40 E-value=4.1e-12 Score=125.22 Aligned_cols=180 Identities=14% Similarity=0.135 Sum_probs=115.1
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
.+||+|||+|.||++||..|+++ | ++|++||++++.+++..+. +... +.+..+... +...
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~a-G-----~~V~l~D~~~e~l~~~~~~-----i~~~---l~~~~~~g~-~~~~----- 64 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASH-G-----HQVLLYDISAEALTRAIDG-----IHAR---LNSRVTRGK-LTAE----- 64 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSCHHHHHHHHHH-----HHHH---HHTTTTTTS-SCHH-----
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-C-----CeEEEEECCHHHHHHHHHH-----HHHH---HHHHHHcCC-CCHH-----
Confidence 47999999999999999999999 9 8999999999887764321 1110 000000000 0000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch--hHHHHHHHHHHHhhccCCCCEEEEeeccC
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST--ETKEVFEEISRYWKERITVPVIISLAKGV 200 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~--~~~~vl~~l~~~l~~~~~~~iivs~~nGi 200 (303)
+. +..+.+++.++|++ ++++||+||+|||+. .++++++++.+++++ +++++|+++++
T Consensus 65 -------~~----------~~~~~~i~~~~~~~-~~~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~---~~IlasntSti 123 (483)
T 3mog_A 65 -------TC----------ERTLKRLIPVTDIH-ALAAADLVIEAASERLEVKKALFAQLAEVCPP---QTLLTTNTSSI 123 (483)
T ss_dssp -------HH----------HHHHHTEEEECCGG-GGGGCSEEEECCCCCHHHHHHHHHHHHHHSCT---TCEEEECCSSS
T ss_pred -------HH----------HHHHhceeEeCCHH-HhcCCCEEEEcCCCcHHHHHHHHHHHHHhhcc---CcEEEecCCCC
Confidence 00 00012678888885 689999999999998 568899999999988 78888999988
Q ss_pred ccccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHHHhccCceEEEEe--CChhhHHHHHHHhcCCCeEEEecCChh
Q 022050 201 EAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARIC--GAEKWRKPLAKFLRRPHFTVWDNGDLV 278 (303)
Q Consensus 201 ~~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~ev~~g~~~~~~~~--~~~~~~~~i~~lf~~~g~~~~~~~Di~ 278 (303)
... .+.+.+..+. .+ +-..|..+..+. ....++.+ .+.+..+.+..+++.-|..++...|..
T Consensus 124 ~i~------------~ia~~~~~p~-~~-ig~hf~~Pa~v~--~Lvevv~g~~Ts~e~~~~~~~l~~~lGk~~v~v~d~~ 187 (483)
T 3mog_A 124 SIT------------AIAAEIKNPE-RV-AGLHFFNPAPVM--KLVEVVSGLATAAEVVEQLCELTLSWGKQPVRCHSTP 187 (483)
T ss_dssp CHH------------HHTTTSSSGG-GE-EEEEECSSTTTC--CEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred CHH------------HHHHHccCcc-ce-EEeeecChhhhC--CeEEEecCCCCCHHHHHHHHHHHHHhCCEEEEEeccC
Confidence 764 2444443321 22 222222222222 12222333 256678888888888887776656655
Q ss_pred H
Q 022050 279 T 279 (303)
Q Consensus 279 g 279 (303)
|
T Consensus 188 G 188 (483)
T 3mog_A 188 G 188 (483)
T ss_dssp T
T ss_pred c
Confidence 4
No 79
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=99.38 E-value=5.6e-12 Score=129.92 Aligned_cols=155 Identities=13% Similarity=0.121 Sum_probs=111.8
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
.+||+|||+|.||+.||..++.+ | ++|+++|++++.+++... .+...+... .... .....
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~a-G-----~~V~l~D~~~~~l~~~~~-~i~~~l~~~-------~~~~-~~~~~----- 375 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARV-G-----ISVVAVESDPKQLDAAKK-IITFTLEKE-------ASRA-HQNGQ----- 375 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-T-----CEEEEECSSHHHHHHHHH-HHHHHHHHH-------HHHH-HTTTC-----
T ss_pred ccEEEEEcccHHHHHHHHHHHhC-C-----CchhcccchHhhhhhHHH-HHHHHHHHH-------HHhc-cccch-----
Confidence 47999999999999999999999 9 999999999988775432 111111110 0000 00000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch--hHHHHHHHHHHHhhccCCCCEEEEeeccC
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST--ETKEVFEEISRYWKERITVPVIISLAKGV 200 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~--~~~~vl~~l~~~l~~~~~~~iivs~~nGi 200 (303)
+.....+..+++.++ +.+||+||+||++. .+++++++|..++++ ++++.|+|+++
T Consensus 376 -------------------~~~~~~~~~~~~~~~-l~~aDlVIEAV~E~l~iK~~vf~~le~~~~~---~aIlASNTSsl 432 (742)
T 3zwc_A 376 -------------------ASAKPKLRFSSSTKE-LSTVDLVVEAVFEDMNLKKKVFAELSALCKP---GAFLCTNTSAL 432 (742)
T ss_dssp -------------------CCCCCCEEEESCGGG-GGSCSEEEECCCSCHHHHHHHHHHHHHHSCT---TCEEEECCSSS
T ss_pred -------------------hhhhhhhcccCcHHH-HhhCCEEEEeccccHHHHHHHHHHHhhcCCC---CceEEecCCcC
Confidence 111236788888764 78999999999997 589999999999998 89999999999
Q ss_pred ccccccccccCCHHHHHHhHhCCCCc---cEEEEeCCCcHHHHh
Q 022050 201 EAELEAVPRIITPTQMINRATGVPIE---NILYLGGPNIASEIY 241 (303)
Q Consensus 201 ~~~~~~~~~~~~~~~~i~~~l~~~~~---~~~v~~GP~~a~ev~ 241 (303)
.++.+ ......|++++.-||..|.+ -+.++.|+.|..++.
T Consensus 433 ~i~~i-a~~~~~p~r~ig~HFfnP~~~m~LVEvi~g~~Ts~e~~ 475 (742)
T 3zwc_A 433 NVDDI-ASSTDRPQLVIGTHFFSPAHVMRLLEVIPSRYSSPTTI 475 (742)
T ss_dssp CHHHH-HTTSSCGGGEEEEECCSSTTTCCEEEEEECSSCCHHHH
T ss_pred ChHHH-HhhcCCccccccccccCCCCCCceEEEecCCCCCHHHH
Confidence 98643 22456777777777765532 257888888877654
No 80
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=99.36 E-value=7e-12 Score=116.10 Aligned_cols=156 Identities=19% Similarity=0.185 Sum_probs=104.5
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
.+||+|||+|.||+.||..|+ + | ++|++||++++.+++..+. +..
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-a-G-----~~V~v~d~~~~~~~~~~~~----------------------l~~------ 56 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-S-K-----HEVVLQDVSEKALEAAREQ----------------------IPE------ 56 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T-T-----SEEEEECSCHHHHHHHHHH----------------------SCG------
T ss_pred CCeEEEEeeCHHHHHHHHHHH-c-C-----CEEEEEECCHHHHHHHHHH----------------------HHH------
Confidence 489999999999999999999 9 9 8999999999876542210 000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh--HHHHHHHHHHHhhccCCCCEEEEeeccC
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE--TKEVFEEISRYWKERITVPVIISLAKGV 200 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~--~~~vl~~l~~~l~~~~~~~iivs~~nGi 200 (303)
..+.+++.++|+++ +++||+||+++|+.. ++.++.++.++ + ++++++.++++
T Consensus 57 --------------------~~~~~i~~~~~~~~-~~~aDlVieavpe~~~vk~~l~~~l~~~--~---~~IlasntSti 110 (293)
T 1zej_A 57 --------------------ELLSKIEFTTTLEK-VKDCDIVMEAVFEDLNTKVEVLREVERL--T---NAPLCSNTSVI 110 (293)
T ss_dssp --------------------GGGGGEEEESSCTT-GGGCSEEEECCCSCHHHHHHHHHHHHTT--C---CSCEEECCSSS
T ss_pred --------------------HHhCCeEEeCCHHH-HcCCCEEEEcCcCCHHHHHHHHHHHhcC--C---CCEEEEECCCc
Confidence 00124777788875 789999999999985 67788888776 5 78888888887
Q ss_pred ccccccccccCCHHHHHHhHhCCCCccEE--EEeCCCcHHHHhccCceEEEEe--CChhhHHHHHHHhcCCCeEEEecCC
Q 022050 201 EAELEAVPRIITPTQMINRATGVPIENIL--YLGGPNIASEIYNKEYANARIC--GAEKWRKPLAKFLRRPHFTVWDNGD 276 (303)
Q Consensus 201 ~~~~~~~~~~~~~~~~i~~~l~~~~~~~~--v~~GP~~a~ev~~g~~~~~~~~--~~~~~~~~i~~lf~~~g~~~~~~~D 276 (303)
.++ .+.+.+..+. .+. -...|- ..+....++.+ .+++..+.+..++..-|-.++...|
T Consensus 111 ~~~------------~~a~~~~~~~-r~~G~Hf~~Pv-----~~~~lveiv~g~~t~~~~~~~~~~l~~~lGk~~v~v~d 172 (293)
T 1zej_A 111 SVD------------DIAERLDSPS-RFLGVHWMNPP-----HVMPLVEIVISRFTDSKTVAFVEGFLRELGKEVVVCKG 172 (293)
T ss_dssp CHH------------HHHTTSSCGG-GEEEEEECSST-----TTCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEES
T ss_pred CHH------------HHHHHhhccc-ceEeEEecCcc-----ccCCEEEEECCCCCCHHHHHHHHHHHHHcCCeEEEecc
Confidence 764 2333333221 111 111232 12222333333 3667788888888888877665445
Q ss_pred h
Q 022050 277 L 277 (303)
Q Consensus 277 i 277 (303)
.
T Consensus 173 ~ 173 (293)
T 1zej_A 173 Q 173 (293)
T ss_dssp S
T ss_pred c
Confidence 3
No 81
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.33 E-value=1.5e-11 Score=113.91 Aligned_cols=155 Identities=15% Similarity=0.150 Sum_probs=99.0
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
.+|||+|||+|.||.++|..|++. | ++|++|+|++++++++.+ .
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~-G-----~~V~~~dr~~~~~~~~~~--------------------------~---- 51 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQ-G-----KRVAIWNRSPGKAAALVA--------------------------A---- 51 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSHHHHHHHHH--------------------------H----
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHHHHH--------------------------C----
Confidence 458999999999999999999999 8 899999999876653210 0
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHHH--HHHHHhhccCCCCEEEEeec
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVFE--EISRYWKERITVPVIISLAK 198 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~-~~~~vl~--~l~~~l~~~~~~~iivs~~n 198 (303)
....++++.++++++|+||++||.. .+++++. .+... .+ +++||.++.
T Consensus 52 -------------------------g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~~l~~~-~~---g~ivid~st 102 (306)
T 3l6d_A 52 -------------------------GAHLCESVKAALSASPATIFVLLDNHATHEVLGMPGVARA-LA---HRTIVDYTT 102 (306)
T ss_dssp -------------------------TCEECSSHHHHHHHSSEEEECCSSHHHHHHHHTSTTHHHH-TT---TCEEEECCC
T ss_pred -------------------------CCeecCCHHHHHhcCCEEEEEeCCHHHHHHHhcccchhhc-cC---CCEEEECCC
Confidence 2345577888889999999999976 4888886 66554 44 677776653
Q ss_pred cCccccccccccCCHHHHHHhHhCCCCccEEEEeCCCcH--HHHhccCceEEEEeCChhhHHHHHHHhcCCCeEEEec
Q 022050 199 GVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIA--SEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDN 274 (303)
Q Consensus 199 Gi~~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a--~ev~~g~~~~~~~~~~~~~~~~i~~lf~~~g~~~~~~ 274 (303)
+.+.. .+.+.+.+.... +..+.+|-.. .....+.. .+..+++.+..++++.+|+.-+-+++..
T Consensus 103 -~~~~~---------~~~l~~~~~~~g--~~~vdapv~g~~~~~~~~~~-~i~~gg~~~~~~~~~~ll~~lg~~~~~~ 167 (306)
T 3l6d_A 103 -NAQDE---------GLALQGLVNQAG--GHYVKGMIVAYPRNVGHRES-HSIHTGDREAFEQHRALLEGLAGHTVFL 167 (306)
T ss_dssp -CCTTH---------HHHHHHHHHHTT--CEEEEEEEESCGGGTTCTTC-EEEEEECHHHHHHHHHHHHTTCSEEEEC
T ss_pred -CCHHH---------HHHHHHHHHHcC--CeEEecccccCcccccCCce-EEEEcCCHHHHHHHHHHHHHhcCCEEEe
Confidence 33321 122322221001 1112222221 11222222 2344567778899999999874466554
No 82
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=99.33 E-value=4.8e-11 Score=116.92 Aligned_cols=155 Identities=13% Similarity=0.121 Sum_probs=96.2
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
.++||+|||+|.||+.||..|+.+ | ++|++||++++.+++.... +... +.+... .+. +
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~~-G-----~~V~l~D~~~~~~~~~~~~-----i~~~---l~~~~~-----~g~---~ 93 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFARV-G-----ISVVAVESDPKQLDAAKKI-----ITFT---LEKEAS-----RAH---Q 93 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTT-T-----CEEEEECSSHHHHHHHHHH-----HHHH---HHHHHH-----HHH---H
T ss_pred CCCEEEEECcCHHHHHHHHHHHhC-C-----CeEEEEECCHHHHHHHHHH-----HHHH---HHHHHH-----cCC---C
Confidence 357999999999999999999999 9 8999999999877654321 1100 000000 000 0
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch--hHHHHHHHHHHHhhccCCCCEEEEeecc
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST--ETKEVFEEISRYWKERITVPVIISLAKG 199 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~--~~~~vl~~l~~~l~~~~~~~iivs~~nG 199 (303)
..... ......+++|+ +++++||+||+|||+. .++++++++.+++++ +++|++++++
T Consensus 94 ~~~~~-----------------~~~~~~i~~~~-~~~~~aDlVIeaVpe~~~~k~~v~~~l~~~~~~---~~ii~snTs~ 152 (463)
T 1zcj_A 94 NGQAS-----------------AKPKLRFSSST-KELSTVDLVVEAVFEDMNLKKKVFAELSALCKP---GAFLCTNTSA 152 (463)
T ss_dssp TTCCC-----------------CCCCEEEESCG-GGGTTCSEEEECCCSCHHHHHHHHHHHHHHSCT---TCEEEECCSS
T ss_pred CHHHH-----------------HHHHhhhcCCH-HHHCCCCEEEEcCCCCHHHHHHHHHHHHhhCCC---CeEEEeCCCC
Confidence 00000 00124457777 4688999999999997 368899999999887 8999998888
Q ss_pred CccccccccccCCHHHHHHhHhCCCC---ccEEEEeCCCcHHHH
Q 022050 200 VEAELEAVPRIITPTQMINRATGVPI---ENILYLGGPNIASEI 240 (303)
Q Consensus 200 i~~~~~~~~~~~~~~~~i~~~l~~~~---~~~~v~~GP~~a~ev 240 (303)
+....+ ......+++++..|+..|. ..+.++.||.+..+.
T Consensus 153 ~~~~~l-a~~~~~~~~~ig~hf~~P~~~~~lvevv~g~~t~~e~ 195 (463)
T 1zcj_A 153 LNVDDI-ASSTDRPQLVIGTHFFSPAHVMRLLEVIPSRYSSPTT 195 (463)
T ss_dssp SCHHHH-HTTSSCGGGEEEEEECSSTTTCCEEEEEECSSCCHHH
T ss_pred cCHHHH-HHHhcCCcceEEeecCCCcccceeEEEeCCCCCCHHH
Confidence 766421 0112223333333332221 124566666665544
No 83
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=99.32 E-value=1.9e-11 Score=125.94 Aligned_cols=178 Identities=14% Similarity=0.158 Sum_probs=110.3
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
++||+|||+|.||+.||..|+.+ | ++|++||++++.+++.... +... +.+..+.. .+...
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~a-G-----~~V~l~D~~~~~~~~~~~~-----i~~~---l~~~~~~G-~~~~~----- 371 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILS-N-----YPVILKEVNEKFLEAGIGR-----VKAN---LQSRVRKG-SMSQE----- 371 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTT-T-----CCEEEECSSHHHHHHHHHH-----HHHH---HHHTTC-----CTT-----
T ss_pred CcEEEEEcCCHhhHHHHHHHHhC-C-----CEEEEEECCHHHHHHHHHH-----HHHH---HHHHHhcC-CCCHH-----
Confidence 57899999999999999999999 9 9999999999877653211 1110 00000000 00000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh--HHHHHHHHHHHhhccCCCCEEEEeeccC
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE--TKEVFEEISRYWKERITVPVIISLAKGV 200 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~--~~~vl~~l~~~l~~~~~~~iivs~~nGi 200 (303)
+. +..+.+++.++|+ +++++||+||+|||+.. ++++++++.+++++ +++++++++++
T Consensus 372 -------~~----------~~~~~~i~~~~d~-~~~~~aDlVIeaVpe~~~vk~~v~~~l~~~~~~---~~IlasntStl 430 (725)
T 2wtb_A 372 -------KF----------EKTMSLLKGSLDY-ESFRDVDMVIEAVIENISLKQQIFADLEKYCPQ---HCILASNTSTI 430 (725)
T ss_dssp -------HH----------HHTTTSEEEESSS-GGGTTCSEEEECCCSCHHHHHHHHHHHHHHSCT---TCEEEECCSSS
T ss_pred -------HH----------HHHhcceEEeCCH-HHHCCCCEEEEcCcCCHHHHHHHHHHHHhhCCC---CcEEEeCCCCC
Confidence 00 0012368888888 57899999999999985 78899999999988 78888999888
Q ss_pred ccccccccccCCHHHHHHhHhCCCCccEE--EEeCCCcHHHHhccCc-eEEEEe--CChhhHHHHHHHhcCCCeEEEecC
Q 022050 201 EAELEAVPRIITPTQMINRATGVPIENIL--YLGGPNIASEIYNKEY-ANARIC--GAEKWRKPLAKFLRRPHFTVWDNG 275 (303)
Q Consensus 201 ~~~~~~~~~~~~~~~~i~~~l~~~~~~~~--v~~GP~~a~ev~~g~~-~~~~~~--~~~~~~~~i~~lf~~~g~~~~~~~ 275 (303)
.... +.+.+..+. .+. -...|. ...+ ..++.+ .+++..+.+..++..-|..++...
T Consensus 431 ~i~~------------la~~~~~p~-~~iG~hf~~P~------~~~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v~v~ 491 (725)
T 2wtb_A 431 DLNK------------IGERTKSQD-RIVGAHFFSPA------HIMPLLEIVRTNHTSAQVIVDLLDVGKKIKKTPVVVG 491 (725)
T ss_dssp CHHH------------HTTTCSCTT-TEEEEEECSST------TTCCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CHHH------------HHHHhcCCC-CEEEecCCCCc------ccCceEEEEECCCCCHHHHHHHHHHHHHhCCEEEEEC
Confidence 7642 333332221 111 111121 1122 222222 255667777788877777666555
Q ss_pred ChhHH
Q 022050 276 DLVTH 280 (303)
Q Consensus 276 Di~g~ 280 (303)
|..|.
T Consensus 492 d~~Gf 496 (725)
T 2wtb_A 492 NCTGF 496 (725)
T ss_dssp SSTTT
T ss_pred CCccH
Confidence 55443
No 84
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=99.31 E-value=4.4e-13 Score=122.39 Aligned_cols=177 Identities=14% Similarity=0.047 Sum_probs=98.1
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeE-EEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
+|||+|||+|+||.+++..|+++ ++| .+|+|++++++++.. .+
T Consensus 2 ~m~I~iIG~G~mG~~la~~l~~~-------~~v~~v~~~~~~~~~~~~~-------------------------~~---- 45 (276)
T 2i76_A 2 SLVLNFVGTGTLTRFFLECLKDR-------YEIGYILSRSIDRARNLAE-------------------------VY---- 45 (276)
T ss_dssp --CCEEESCCHHHHHHHHTTC-----------CCCEECSSHHHHHHHHH-------------------------HT----
T ss_pred CceEEEEeCCHHHHHHHHHHHHc-------CcEEEEEeCCHHHHHHHHH-------------------------Hc----
Confidence 37999999999999999988754 578 599999876543210 00
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeeccCc
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nGi~ 201 (303)
+. .+++++++++++|+||+|||++.+.++++++. .+ +++|++++.++.
T Consensus 46 -------------------------g~-~~~~~~~~~~~~DvVilav~~~~~~~v~~~l~---~~---~~ivi~~s~~~~ 93 (276)
T 2i76_A 46 -------------------------GG-KAATLEKHPELNGVVFVIVPDRYIKTVANHLN---LG---DAVLVHCSGFLS 93 (276)
T ss_dssp -------------------------CC-CCCSSCCCCC---CEEECSCTTTHHHHHTTTC---CS---SCCEEECCSSSC
T ss_pred -------------------------CC-ccCCHHHHHhcCCEEEEeCChHHHHHHHHHhc---cC---CCEEEECCCCCc
Confidence 11 23455556678999999999999999988775 34 678888776655
Q ss_pred cccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHHHhccCceEEEEeCChhhHHHHHHHhcCCCeEEE-ecC-ChhH
Q 022050 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVW-DNG-DLVT 279 (303)
Q Consensus 202 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~ev~~g~~~~~~~~~~~~~~~~i~~lf~~~g~~~~-~~~-Di~g 279 (303)
.+. +.+.+....++...++||....+...+.+. ....+++..+.++.+|+.-|.+++ +.+ +...
T Consensus 94 ~~~------------l~~~~~~~~~p~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~lG~~~~~v~~~~~~~ 159 (276)
T 2i76_A 94 SEI------------FKKSGRASIHPNFSFSSLEKALEMKDQIVF--GLEGDERGLPIVKKIAEEISGKYFVIPSEKKKA 159 (276)
T ss_dssp GGG------------GCSSSEEEEEECSCC--CTTGGGCGGGCCE--EECCCTTTHHHHHHHHHHHCSCEEECCGGGHHH
T ss_pred HHH------------HHHhhccccchhhhcCCCchhHHHhCCCeE--EEEeChHHHHHHHHHHHHhCCCEEEECHHHHHH
Confidence 531 222111001222223443333222233322 234445557777777776665443 332 3222
Q ss_pred -----HHHHHHHHHHHHHHHHHHhhhc
Q 022050 280 -----HEVMGGLKNVYAIGAGTIYFLV 301 (303)
Q Consensus 280 -----~e~~~~lkNv~Ai~~G~~~gl~ 301 (303)
.-.+-.+.++++.+..++...+
T Consensus 160 ~~~~~~l~~n~~~~~~~~a~~~~~~~G 186 (276)
T 2i76_A 160 YHLAAVIASNFPVALAYLSKRIYTLLG 186 (276)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 2222346778888777766544
No 85
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=99.30 E-value=3.6e-11 Score=123.65 Aligned_cols=182 Identities=13% Similarity=0.082 Sum_probs=111.1
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
..+||+|||+|.||+.||..|+.+ | ++|++||++++.+++.... +... +.+..+.. .+...+
T Consensus 313 ~i~kV~VIGaG~MG~~iA~~la~a-G-----~~V~l~D~~~~~~~~~~~~-----i~~~---l~~~~~~G-~~~~~~--- 374 (715)
T 1wdk_A 313 DVKQAAVLGAGIMGGGIAYQSASK-G-----TPILMKDINEHGIEQGLAE-----AAKL---LVGRVDKG-RMTPAK--- 374 (715)
T ss_dssp CCSSEEEECCHHHHHHHHHHHHHT-T-----CCEEEECSSHHHHHHHHHH-----HHHH---HHHHHTTT-SSCHHH---
T ss_pred cCCEEEEECCChhhHHHHHHHHhC-C-----CEEEEEECCHHHHHHHHHH-----HHHH---HHHHHhcC-CCCHHH---
Confidence 468999999999999999999999 9 8999999999877642210 1110 11000000 000000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh--HHHHHHHHHHHhhccCCCCEEEEeecc
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE--TKEVFEEISRYWKERITVPVIISLAKG 199 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~--~~~vl~~l~~~l~~~~~~~iivs~~nG 199 (303)
.++ .+.++++++|+ +++++||+||+|||+.. ++++++++.+++++ +++++|++++
T Consensus 375 ------~~~-------------~~~~i~~~~d~-~~~~~aDlVIeaV~e~~~vk~~v~~~l~~~~~~---~~IlasntSt 431 (715)
T 1wdk_A 375 ------MAE-------------VLNGIRPTLSY-GDFGNVDLVVEAVVENPKVKQAVLAEVENHVRE---DAILASNTST 431 (715)
T ss_dssp ------HHH-------------HHHHEEEESSS-TTGGGCSEEEECCCSCHHHHHHHHHHHHTTSCT---TCEEEECCSS
T ss_pred ------HHH-------------HhcCeEEECCH-HHHCCCCEEEEcCCCCHHHHHHHHHHHHhhCCC---CeEEEeCCCC
Confidence 000 00147778888 67899999999999874 78899999998887 7899999988
Q ss_pred CccccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHHHhccCceEEEEe--CChhhHHHHHHHhcCCCeEEEecCCh
Q 022050 200 VEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARIC--GAEKWRKPLAKFLRRPHFTVWDNGDL 277 (303)
Q Consensus 200 i~~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~ev~~g~~~~~~~~--~~~~~~~~i~~lf~~~g~~~~~~~Di 277 (303)
++... +.+.+..+. .+.. ..|..+.. .+....++.+ .+++..+.+..+++.-|..++...|.
T Consensus 432 l~i~~------------la~~~~~~~-~~ig-~hf~~P~~--~~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v~v~d~ 495 (715)
T 1wdk_A 432 ISISL------------LAKALKRPE-NFVG-MHFFNPVH--MMPLVEVIRGEKSSDLAVATTVAYAKKMGKNPIVVNDC 495 (715)
T ss_dssp SCHHH------------HGGGCSCGG-GEEE-EECCSSTT--TCCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCHHH------------HHHHhcCcc-ceEE-EEccCCcc--cCceEEEEECCCCCHHHHHHHHHHHHHhCCEeEEEcCC
Confidence 87641 444343221 1211 11111111 1111222333 25567788888888777766665565
Q ss_pred hHH
Q 022050 278 VTH 280 (303)
Q Consensus 278 ~g~ 280 (303)
.|.
T Consensus 496 ~Gf 498 (715)
T 1wdk_A 496 PGF 498 (715)
T ss_dssp TTT
T ss_pred CCh
Confidence 443
No 86
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.27 E-value=3.2e-11 Score=111.93 Aligned_cols=182 Identities=15% Similarity=0.178 Sum_probs=118.4
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
.|+||++||.|.||..+|..|.++ | |+|++|+|++++++.+.+
T Consensus 2 ~M~kIgfIGlG~MG~~mA~~L~~~-G-----~~v~v~dr~~~~~~~l~~------------------------------- 44 (300)
T 3obb_A 2 HMKQIAFIGLGHMGAPMATNLLKA-G-----YLLNVFDLVQSAVDGLVA------------------------------- 44 (300)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHT-T-----CEEEEECSSHHHHHHHHH-------------------------------
T ss_pred CcCEEEEeeehHHHHHHHHHHHhC-C-----CeEEEEcCCHHHHHHHHH-------------------------------
Confidence 468999999999999999999999 9 999999999886653210
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHHHH---HHHHhhccCCCCEEEEee
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVFEE---ISRYWKERITVPVIISLA 197 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~-~~~~vl~~---l~~~l~~~~~~~iivs~~ 197 (303)
...+...++.++++.+|+||.++|.. ++++++.. +.+.+.+ ++++|.++
T Consensus 45 ------------------------~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g~~~~~~~---g~iiId~s 97 (300)
T 3obb_A 45 ------------------------AGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGLLAHIAP---GTLVLECS 97 (300)
T ss_dssp ------------------------TTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSSSTTSCCC----CEEEECS
T ss_pred ------------------------cCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchhhhhhcCCC---CCEEEECC
Confidence 03455678899999999999999986 57777755 3344455 67777655
Q ss_pred ccCccccccccccCCHHHHHHhHhCCCCccEEEEeCCCc--HHHHhccCceEEEEeCChhhHHHHHHHhcCCCeEEEecC
Q 022050 198 KGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNI--ASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNG 275 (303)
Q Consensus 198 nGi~~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~--a~ev~~g~~~~~~~~~~~~~~~~i~~lf~~~g~~~~~~~ 275 (303)
. +.+++ ++.+.+.+.... +..+-.|-. +.....|..+ +.++++.+..++++.+|+.-+-+++...
T Consensus 98 T-~~p~~---------~~~~a~~~~~~G--~~~lDaPVsGg~~~A~~G~L~-imvGG~~~~~~~~~p~l~~~g~~i~~~G 164 (300)
T 3obb_A 98 T-IAPTS---------ARKIHAAARERG--LAMLDAPVSGGTAGAAAGTLT-FMVGGDAEALEKARPLFEAMGRNIFHAG 164 (300)
T ss_dssp C-CCHHH---------HHHHHHHHHTTT--CEEEECCEESCHHHHHHTCEE-EEEESCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred C-CCHHH---------HHHHHHHHHHcC--CEEEecCCCCCHHHHHhCCEE-EEEeCCHHHHHHHHHHHHHhCCCEEEeC
Confidence 3 33321 123333332111 223333322 1222234322 3457778888888888887777777666
Q ss_pred ChhHHHHHHHHHHHHH--HHHHHHhhh
Q 022050 276 DLVTHEVMGGLKNVYA--IGAGTIYFL 300 (303)
Q Consensus 276 Di~g~e~~~~lkNv~A--i~~G~~~gl 300 (303)
+.=.-...|.+-|.+. ...+++|++
T Consensus 165 ~~G~g~~~Kl~~N~l~~~~~~a~aEa~ 191 (300)
T 3obb_A 165 PDGAGQVAKVCNNQLLAVLMIGTAEAM 191 (300)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7666788888888654 334555554
No 87
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.26 E-value=8.8e-11 Score=108.64 Aligned_cols=180 Identities=19% Similarity=0.219 Sum_probs=112.3
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhcC
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (303)
+||+|||.|.||..+|..|+++ | |+|++|||++++++.+. .
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~-G-----~~V~v~dr~~~~~~~l~--------------------------~------- 46 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEA-G-----YELVVWNRTASKAEPLT--------------------------K------- 46 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-T-----CEEEEC-------CTTT--------------------------T-------
T ss_pred CcEEEEecHHHHHHHHHHHHHC-C-----CeEEEEeCCHHHHHHHH--------------------------H-------
Confidence 4899999999999999999999 9 99999999998664311 0
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh-HHHHH-HHHHHHhhccCCCCEEEEeeccCc
Q 022050 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE-TKEVF-EEISRYWKERITVPVIISLAKGVE 201 (303)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~-~~~vl-~~l~~~l~~~~~~~iivs~~nGi~ 201 (303)
.......++.++++++|+||+++|... .++++ ..+.+.+.+ ++++|..+ .+.
T Consensus 47 ----------------------~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~~~~~~~---~~iiid~s-T~~ 100 (297)
T 4gbj_A 47 ----------------------LGATVVENAIDAITPGGIVFSVLADDAAVEELFSMELVEKLGK---DGVHVSMS-TIS 100 (297)
T ss_dssp ----------------------TTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHHHHHHCT---TCEEEECS-CCC
T ss_pred ----------------------cCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHHHhhcCC---CeEEEECC-CCC
Confidence 134556778888999999999999864 45544 557777776 67777655 334
Q ss_pred cccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHH--HHhccCceEEEEeCChhhHHHHHHHhcCCCeEEEecC-Chh
Q 022050 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIAS--EIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNG-DLV 278 (303)
Q Consensus 202 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~--ev~~g~~~~~~~~~~~~~~~~i~~lf~~~g~~~~~~~-Di~ 278 (303)
+++ .+.+.+.+... .+..+..|-.-. ....|... +..+++.+..++++.+|+.-+-+++... ++=
T Consensus 101 p~~---------~~~~~~~~~~~--g~~~ldapVsGg~~~a~~g~l~-im~gG~~~~~~~~~~~l~~~g~~i~~~g~~~G 168 (297)
T 4gbj_A 101 PET---------SRQLAQVHEWY--GAHYVGAPIFARPEAVRAKVGN-ICLSGNAGAKERIKPIVENFVKGVFDFGDDPG 168 (297)
T ss_dssp HHH---------HHHHHHHHHHT--TCEEEECCEECCHHHHHHTCCE-EEEEECHHHHHHHHHHHHTTCSEEEECCSCTT
T ss_pred hHH---------HHHHHHHHHhc--CCceecCCcCCCccccccccce-eecccchhHHHHHHHHHHHhhCCeEEecCCcc
Confidence 431 12233322111 122333333322 12233222 3456777788999999998888877655 555
Q ss_pred HHHHHHHHHHHHH--HHHHHHhhh
Q 022050 279 THEVMGGLKNVYA--IGAGTIYFL 300 (303)
Q Consensus 279 g~e~~~~lkNv~A--i~~G~~~gl 300 (303)
.-+..|.+-|.+. ...+++|++
T Consensus 169 ~g~~~Kl~~N~~~~~~~~~~aEa~ 192 (297)
T 4gbj_A 169 AANVIKLAGNFMIACSLEMMGEAF 192 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6788888888753 344555544
No 88
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.23 E-value=3.5e-11 Score=113.61 Aligned_cols=159 Identities=9% Similarity=0.066 Sum_probs=101.8
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
.++||+|||+|.||++||..|.++ | ++|++|+|+++.++.+.+ .
T Consensus 7 ~~~kIgIIG~G~mG~slA~~L~~~-G-----~~V~~~dr~~~~~~~a~~--------------------------~---- 50 (341)
T 3ktd_A 7 ISRPVCILGLGLIGGSLLRDLHAA-N-----HSVFGYNRSRSGAKSAVD--------------------------E---- 50 (341)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSCHHHHHHHHH--------------------------T----
T ss_pred CCCEEEEEeecHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHHHHH--------------------------c----
Confidence 458999999999999999999998 8 899999999876543110 0
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc----CCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEee
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW----DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~----~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~ 197 (303)
++..++++.++++ ++|+||++||+..+.++++++.++ ++ +++|+.+.
T Consensus 51 -------------------------G~~~~~~~~e~~~~a~~~aDlVilavP~~~~~~vl~~l~~~-~~---~~iv~Dv~ 101 (341)
T 3ktd_A 51 -------------------------GFDVSADLEATLQRAAAEDALIVLAVPMTAIDSLLDAVHTH-AP---NNGFTDVV 101 (341)
T ss_dssp -------------------------TCCEESCHHHHHHHHHHTTCEEEECSCHHHHHHHHHHHHHH-CT---TCCEEECC
T ss_pred -------------------------CCeeeCCHHHHHHhcccCCCEEEEeCCHHHHHHHHHHHHcc-CC---CCEEEEcC
Confidence 1234556666554 579999999999999999999886 55 66665443
Q ss_pred ccCccccccccccCCHHHHHHhHhCC----CCccEE--EEeCCCcHH-HHhccCceEEEEe--CChh--------hHHHH
Q 022050 198 KGVEAELEAVPRIITPTQMINRATGV----PIENIL--YLGGPNIAS-EIYNKEYANARIC--GAEK--------WRKPL 260 (303)
Q Consensus 198 nGi~~~~~~~~~~~~~~~~i~~~l~~----~~~~~~--v~~GP~~a~-ev~~g~~~~~~~~--~~~~--------~~~~i 260 (303)
++... +.+.+.+.++. +.+|+. ..+||..+. ++..|.++.++.. .+.+ ..+.+
T Consensus 102 -Svk~~---------i~~~~~~~~~~~~~v~~HPmaG~e~sG~~aa~~~Lf~g~~~iltp~~~~~~e~~~~~~~~~~~~v 171 (341)
T 3ktd_A 102 -SVKTA---------VYDAVKARNMQHRYVGSHPMAGTANSGWSASMDGLFKRAVWVVTFDQLFDGTDINSTWISIWKDV 171 (341)
T ss_dssp -SCSHH---------HHHHHHHTTCGGGEECEEECCSCC-CCGGGCCSSTTTTCEEEECCGGGTSSCCCCHHHHHHHHHH
T ss_pred -CCChH---------HHHHHHHhCCCCcEecCCccccccccchhhhhhHHhcCCeEEEEeCCCCChhhhccchHHHHHHH
Confidence 33221 11223333210 112321 123443332 3455655444332 2345 67899
Q ss_pred HHHhcCCCeEEEecC
Q 022050 261 AKFLRRPHFTVWDNG 275 (303)
Q Consensus 261 ~~lf~~~g~~~~~~~ 275 (303)
.++|+..|.+++..+
T Consensus 172 ~~l~~~~Ga~v~~~~ 186 (341)
T 3ktd_A 172 VQMALAVGAEVVPSR 186 (341)
T ss_dssp HHHHHHTTCEEEECC
T ss_pred HHHHHHcCCEEEEeC
Confidence 999999997776543
No 89
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=99.19 E-value=1.4e-10 Score=113.47 Aligned_cols=153 Identities=16% Similarity=0.130 Sum_probs=104.5
Q ss_pred ceEEEECCChHHHHHHHHHHHh-----cCCCCCCeeEEEEecCCchh-hhhhhhhHHHHHhhhhhHHHHhhhhcccchhh
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDS-----YGYLRDKVLIRIWRRPGRSV-DRATAEHLFEVINSREDVLRRLIRRCAYLKYV 117 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~-----~G~~~~~~~V~l~~r~~~~~-~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~ 117 (303)
+||+|||+|+||.++|..|.++ .| ++|++..+...+. +... . .
T Consensus 55 KkIgIIGlGsMG~AmA~nLr~s~~~~g~G-----~~ViVg~r~~sks~e~A~--------e----------------~-- 103 (525)
T 3fr7_A 55 KQIGVIGWGSQGPAQAQNLRDSLAEAKSD-----IVVKIGLRKGSKSFDEAR--------A----------------A-- 103 (525)
T ss_dssp SEEEEECCTTHHHHHHHHHHHHHHHTTCC-----CEEEEEECTTCSCHHHHH--------H----------------T--
T ss_pred CEEEEEeEhHHHHHHHHHHHhcccccCCC-----CEEEEEeCCchhhHHHHH--------H----------------C--
Confidence 7999999999999999999874 15 6888776654322 1100 0 0
Q ss_pred hhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEee
Q 022050 118 EARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (303)
Q Consensus 118 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~ 197 (303)
|+.. ......++.+++++||+||++||+....+++++|.+++++ +++ ++.+
T Consensus 104 -----------------G~~v--------~d~ta~s~aEAa~~ADVVILaVP~~~~~eVl~eI~p~LK~---GaI-Ls~A 154 (525)
T 3fr7_A 104 -----------------GFTE--------ESGTLGDIWETVSGSDLVLLLISDAAQADNYEKIFSHMKP---NSI-LGLS 154 (525)
T ss_dssp -----------------TCCT--------TTTCEEEHHHHHHHCSEEEECSCHHHHHHHHHHHHHHSCT---TCE-EEES
T ss_pred -----------------CCEE--------ecCCCCCHHHHHhcCCEEEECCChHHHHHHHHHHHHhcCC---CCe-EEEe
Confidence 0000 0001246778899999999999999888899999999987 666 7899
Q ss_pred ccCccccccccccCCHHHHHHh---HhCCCCccEEEEeCCCcHHHH-------h-----ccCceEEEEeC--ChhhHHHH
Q 022050 198 KGVEAELEAVPRIITPTQMINR---ATGVPIENILYLGGPNIASEI-------Y-----NKEYANARICG--AEKWRKPL 260 (303)
Q Consensus 198 nGi~~~~~~~~~~~~~~~~i~~---~l~~~~~~~~v~~GP~~a~ev-------~-----~g~~~~~~~~~--~~~~~~~i 260 (303)
.|+... .+.+ .++. ..-+++.+|+++..+ + .|.++.+.+.. +.+..+.+
T Consensus 155 aGf~I~------------~le~~~i~~p~--dv~VVrVmPNtPg~~VR~~y~~G~~~~g~Gv~~liAv~qd~tgea~e~a 220 (525)
T 3fr7_A 155 HGFLLG------------HLQSAGLDFPK--NISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATDVA 220 (525)
T ss_dssp SSHHHH------------HHHHTTCCCCT--TSEEEEEEESSCHHHHHHHHHHHTTSTTCSCCEEEEEEECSSSCHHHHH
T ss_pred CCCCHH------------HHhhhcccCCC--CCcEEEEecCCCchhHHHHHhcccccccCCccEEEEcCCCCCHHHHHHH
Confidence 998764 3443 2332 124788999998876 4 57775555432 23566777
Q ss_pred HHHhcCCCeE
Q 022050 261 AKFLRRPHFT 270 (303)
Q Consensus 261 ~~lf~~~g~~ 270 (303)
..+|..-|..
T Consensus 221 lala~aiG~~ 230 (525)
T 3fr7_A 221 LGWSVALGSP 230 (525)
T ss_dssp HHHHHHTTCS
T ss_pred HHHHHHCCCC
Confidence 7887776654
No 90
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=99.08 E-value=2.6e-10 Score=105.50 Aligned_cols=107 Identities=16% Similarity=0.254 Sum_probs=74.3
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCe--eEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV--LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~--~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~ 119 (303)
.+|||+|||+|+||+++|..|+.+ | + +|++|++++++++.... .+... . .+...
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~-g-----~~~~V~l~d~~~~~~~~~~~-----~~~~~---------~-~~~~~--- 61 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQR-G-----IAREIVLEDIAKERVEAEVL-----DMQHG---------S-SFYPT--- 61 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT-T-----CCSEEEEECSSHHHHHHHHH-----HHHHT---------G-GGSTT---
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-C-----CCCEEEEEeCChhHHHHHHH-----HHHhh---------h-hhcCC---
Confidence 458999999999999999999998 8 7 99999999765541000 00000 0 00000
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh----------------HHHHHHHHHHH
Q 022050 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE----------------TKEVFEEISRY 183 (303)
Q Consensus 120 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~----------------~~~vl~~l~~~ 183 (303)
..+..+++. +++++||+||+++|... ++++++++.++
T Consensus 62 --------------------------~~v~~~~~~-~~~~~aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~ 114 (319)
T 1lld_A 62 --------------------------VSIDGSDDP-EICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV 114 (319)
T ss_dssp --------------------------CEEEEESCG-GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------eEEEeCCCH-HHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 134555565 46789999999996543 33788888885
Q ss_pred hhccCCCCEEEEeeccCccc
Q 022050 184 WKERITVPVIISLAKGVEAE 203 (303)
Q Consensus 184 l~~~~~~~iivs~~nGi~~~ 203 (303)
.+ +++|++++||+...
T Consensus 115 -~~---~~~vi~~~Np~~~~ 130 (319)
T 1lld_A 115 -AP---NAIYMLITNPVDIA 130 (319)
T ss_dssp -CT---TSEEEECCSSHHHH
T ss_pred -CC---CceEEEecCchHHH
Confidence 45 68999999998764
No 91
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=99.07 E-value=1.2e-09 Score=102.59 Aligned_cols=106 Identities=12% Similarity=0.180 Sum_probs=76.8
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCe-eEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~-~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
+|||+|||+|.||+++|..|+.+ | + +|.+||+++++++....+ +... + .++.
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~-g-----~~~V~L~D~~~~~~~~~~~~-----l~~~---------~-~~~~------ 61 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALR-E-----LADVVLYDVVKGMPEGKALD-----LSHV---------T-SVVD------ 61 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-T-----CCEEEEECSSSSHHHHHHHH-----HHHH---------H-HHTT------
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-----CCeEEEEECChhHHHHHHHH-----HHhh---------h-hccC------
Confidence 48999999999999999999999 8 6 899999999877541110 1100 0 0010
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEec--Cch-------------------hHHHHHHHH
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGL--PST-------------------ETKEVFEEI 180 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaV--p~~-------------------~~~~vl~~l 180 (303)
. ..++++++|+++++++||+||+++ |.. .+++++++|
T Consensus 62 ----~------------------~~~i~~t~d~~ea~~~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i 119 (331)
T 1pzg_A 62 ----T------------------NVSVRAEYSYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNI 119 (331)
T ss_dssp ----C------------------CCCEEEECSHHHHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHH
T ss_pred ----C------------------CCEEEEeCCHHHHhCCCCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 0 026888899988899999999998 542 267888888
Q ss_pred HHHhhccCCCCEEEEeeccCc
Q 022050 181 SRYWKERITVPVIISLAKGVE 201 (303)
Q Consensus 181 ~~~l~~~~~~~iivs~~nGi~ 201 (303)
.++. + +++++..+|...
T Consensus 120 ~~~~-p---~a~vi~~tNP~~ 136 (331)
T 1pzg_A 120 KKYC-P---KTFIIVVTNPLD 136 (331)
T ss_dssp HHHC-T---TCEEEECCSSHH
T ss_pred HHHC-C---CcEEEEEcCchH
Confidence 8876 4 577776676544
No 92
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=99.02 E-value=1.7e-09 Score=100.57 Aligned_cols=106 Identities=11% Similarity=0.161 Sum_probs=76.7
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCe-eEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~-~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
.|||+|||+|.||+++|..|+.+ | + +|++||+++++++....+ +... . ...
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~-g-----~~~V~l~D~~~~~~~~~~~~-----l~~~---------~----~~~---- 55 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKD-N-----LADVVLFDIAEGIPQGKALD-----ITHS---------M----VMF---- 55 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-T-----CCEEEEECSSSSHHHHHHHH-----HHHH---------H----HHH----
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-----CceEEEEeCCchHHHHHHHH-----HHhh---------h----hhc----
Confidence 48999999999999999999999 8 6 899999998776532100 0000 0 000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEec--------------Cc--hhHHHHHHHHHHHhh
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGL--------------PS--TETKEVFEEISRYWK 185 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaV--------------p~--~~~~~vl~~l~~~l~ 185 (303)
.. ..++..++|. +++++||+||+++ +. ..+++++++|.++.+
T Consensus 56 ---~~------------------~~~i~~t~d~-~a~~~aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~ 113 (317)
T 2ewd_A 56 ---GS------------------TSKVIGTDDY-ADISGSDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCP 113 (317)
T ss_dssp ---TC------------------CCCEEEESCG-GGGTTCSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCT
T ss_pred ---CC------------------CcEEEECCCH-HHhCCCCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCC
Confidence 00 0257777888 6789999999999 33 347889999988754
Q ss_pred ccCCCCEEEEeeccCcc
Q 022050 186 ERITVPVIISLAKGVEA 202 (303)
Q Consensus 186 ~~~~~~iivs~~nGi~~ 202 (303)
+++++..+|+...
T Consensus 114 ----~~iii~~sNp~~~ 126 (317)
T 2ewd_A 114 ----NAFVICITNPLDV 126 (317)
T ss_dssp ----TSEEEECCSSHHH
T ss_pred ----CcEEEEeCChHHH
Confidence 6888888887554
No 93
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=99.00 E-value=2e-09 Score=99.74 Aligned_cols=106 Identities=18% Similarity=0.183 Sum_probs=75.1
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
||||+|||+|+||+++|..|+.+ |. . ++|++||+++++++.+..+ +... . .+..
T Consensus 1 m~kI~VIGaG~~G~~la~~L~~~-g~--~-~~V~l~d~~~~~~~~~~~~-----l~~~---------~-~~~~------- 54 (309)
T 1hyh_A 1 ARKIGIIGLGNVGAAVAHGLIAQ-GV--A-DDYVFIDANEAKVKADQID-----FQDA---------M-ANLE------- 54 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-TC--C-SEEEEECSSHHHHHHHHHH-----HHHH---------G-GGSS-------
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CC--C-CEEEEEcCCHHHHHHHHHH-----HHhh---------h-hhcC-------
Confidence 48999999999999999999998 72 1 5899999998766542211 1000 0 0000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEE-ecCHHHHhcCCCEEEEecCchh--------------------HHHHHHHHH
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKV-VTNLQEAVWDADIVINGLPSTE--------------------TKEVFEEIS 181 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~-t~d~~~a~~~aDlVIiaVp~~~--------------------~~~vl~~l~ 181 (303)
..+++ ++|+ +++++||+||+++|+.. ++++++++.
T Consensus 55 -----------------------~~~~~~~~d~-~~~~~aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~ 110 (309)
T 1hyh_A 55 -----------------------AHGNIVINDW-AALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLK 110 (309)
T ss_dssp -----------------------SCCEEEESCG-GGGTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHH
T ss_pred -----------------------CCeEEEeCCH-HHhCCCCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 12333 4677 67899999999999865 467888887
Q ss_pred HHhhccCCCCEEEEeeccCcc
Q 022050 182 RYWKERITVPVIISLAKGVEA 202 (303)
Q Consensus 182 ~~l~~~~~~~iivs~~nGi~~ 202 (303)
++.+ +++++..+|++..
T Consensus 111 ~~~~----~~~ii~~tNp~~~ 127 (309)
T 1hyh_A 111 ESGF----HGVLVVISNPVDV 127 (309)
T ss_dssp HTTC----CSEEEECSSSHHH
T ss_pred HHCC----CcEEEEEcCcHHH
Confidence 7653 5777779998765
No 94
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=98.96 E-value=4.7e-09 Score=98.40 Aligned_cols=105 Identities=17% Similarity=0.243 Sum_probs=74.9
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCe-eEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~-~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
+|||+|||+|.||+++|..|+.+ | + +|.+||+++++++.... .+... ....
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~-g-----~~~V~L~Di~~~~l~~~~~-----~l~~~-------------~~~~---- 65 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQK-D-----LGDVYMFDIIEGVPQGKAL-----DLNHC-------------MALI---- 65 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEECSSTTHHHHHHH-----HHHHH-------------HHHH----
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-----CCeEEEEECCHHHHHHHHH-----HHHhH-------------hhcc----
Confidence 37999999999999999999998 8 6 89999999987753110 01100 0000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEec--Cc--------------hhHHHHHHHHHHHhh
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGL--PS--------------TETKEVFEEISRYWK 185 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaV--p~--------------~~~~~vl~~l~~~l~ 185 (303)
. ...++++++|. +++++||+||+++ |. ..++++++++.++.
T Consensus 66 ---~------------------~~~~i~~t~d~-~al~~aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~- 122 (328)
T 2hjr_A 66 ---G------------------SPAKIFGENNY-EYLQNSDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYC- 122 (328)
T ss_dssp ---T------------------CCCCEEEESCG-GGGTTCSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHC-
T ss_pred ---C------------------CCCEEEECCCH-HHHCCCCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHC-
Confidence 0 00268888888 6899999999998 54 23777888888876
Q ss_pred ccCCCCEEEEeeccCc
Q 022050 186 ERITVPVIISLAKGVE 201 (303)
Q Consensus 186 ~~~~~~iivs~~nGi~ 201 (303)
+ +++++..+|...
T Consensus 123 p---~a~viv~tNP~~ 135 (328)
T 2hjr_A 123 P---NAFVICITNPLD 135 (328)
T ss_dssp T---TCEEEECCSSHH
T ss_pred C---CeEEEEecCchH
Confidence 4 577766677543
No 95
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=98.91 E-value=7.9e-09 Score=96.30 Aligned_cols=103 Identities=17% Similarity=0.218 Sum_probs=72.4
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCe--eEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKV--LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~--~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
|||+|||+|+||+++|..|+.+ | + +|++||+++++++.+.. .+... .+ +..
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~-g-----~~~~V~l~D~~~~~~~~~~~-----~l~~~---------~~-~~~------ 53 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMK-G-----FAREMVLIDVDKKRAEGDAL-----DLIHG---------TP-FTR------ 53 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-T-----CCSEEEEECSSHHHHHHHHH-----HHHHH---------GG-GSC------
T ss_pred CEEEEECCCHHHHHHHHHHHhC-C-----CCCeEEEEeCChHHHHHHHH-----HHHhh---------hh-hcC------
Confidence 7999999999999999999999 8 6 99999999876653211 01100 00 000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh----------------HHHHHHHHHHHhh
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE----------------TKEVFEEISRYWK 185 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~----------------~~~vl~~l~~~l~ 185 (303)
. ..+.. +|. +++++||+||+++|... ++++++++.++.
T Consensus 54 -~----------------------~~i~~-~d~-~~~~~aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~- 107 (319)
T 1a5z_A 54 -R----------------------ANIYA-GDY-ADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYA- 107 (319)
T ss_dssp -C----------------------CEEEE-CCG-GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred -C----------------------cEEEe-CCH-HHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-
Confidence 0 12444 454 56899999999998643 577888888775
Q ss_pred ccCCCCEEEEeeccCcc
Q 022050 186 ERITVPVIISLAKGVEA 202 (303)
Q Consensus 186 ~~~~~~iivs~~nGi~~ 202 (303)
+ +++++..+|++..
T Consensus 108 ~---~~~ii~~tNp~~~ 121 (319)
T 1a5z_A 108 P---DSIVIVVTNPVDV 121 (319)
T ss_dssp T---TCEEEECSSSHHH
T ss_pred C---CeEEEEeCCcHHH
Confidence 4 5788888888765
No 96
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=98.82 E-value=3e-08 Score=92.65 Aligned_cols=105 Identities=16% Similarity=0.176 Sum_probs=74.4
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCe-eEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~-~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
+|||+|||+|.||..+|..|+.. | + +|.++|+++++++.... .+... ....
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~-g-----~~~v~L~Di~~~~l~~~~~-----~l~~~-------------~~~~---- 55 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQK-N-----LGDVVLFDIVKNMPHGKAL-----DTSHT-------------NVMA---- 55 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEECSSSSHHHHHHH-----HHHTH-------------HHHH----
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-----CCeEEEEeCCHHHHHHHHH-----HHHhh-------------hhhc----
Confidence 47999999999999999999998 8 5 79999999987653211 11110 0000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEec--Cch-------------------hHHHHHHHH
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGL--PST-------------------ETKEVFEEI 180 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaV--p~~-------------------~~~~vl~~l 180 (303)
.. ..+++.++|. +++++||+||+++ |.. .+++++++|
T Consensus 56 ---~~------------------~~~i~~t~d~-~al~~aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i 113 (322)
T 1t2d_A 56 ---YS------------------NCKVSGSNTY-DDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHI 113 (322)
T ss_dssp ---TC------------------CCCEEEECCG-GGGTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHH
T ss_pred ---CC------------------CcEEEECCCH-HHhCCCCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHH
Confidence 00 0257788888 7899999999998 532 467788888
Q ss_pred HHHhhccCCCCEEEEeeccCc
Q 022050 181 SRYWKERITVPVIISLAKGVE 201 (303)
Q Consensus 181 ~~~l~~~~~~~iivs~~nGi~ 201 (303)
.++. + +++++..+|...
T Consensus 114 ~~~~-p---~a~iiv~tNP~~ 130 (322)
T 1t2d_A 114 KKNC-P---NAFIIVVTNPVD 130 (322)
T ss_dssp HHHC-T---TSEEEECSSSHH
T ss_pred HHHC-C---CeEEEEecCChH
Confidence 8876 4 577766676543
No 97
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=98.82 E-value=3.1e-08 Score=91.94 Aligned_cols=107 Identities=16% Similarity=0.129 Sum_probs=72.1
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhcC
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (303)
|||+|||+|.||+++|..|+.+ +. .++|++||+++++++.+.. .+.. .....
T Consensus 1 mkI~VIGaG~vG~~la~~la~~-~~---g~~V~l~D~~~~~~~~~~~-----~l~~-------------~~~~~------ 52 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEK-QL---ARELVLLDVVEGIPQGKAL-----DMYE-------------SGPVG------ 52 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TC---CSEEEEECSSSSHHHHHHH-----HHHT-------------THHHH------
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CC---CCEEEEEeCChhHHHHHHH-----hHHh-------------hhhcc------
Confidence 7999999999999999999985 31 1799999999987653210 0110 00000
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch----------------hHHHHHHHHHHHhhcc
Q 022050 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST----------------ETKEVFEEISRYWKER 187 (303)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~----------------~~~~vl~~l~~~l~~~ 187 (303)
.. ..++.+++|.++ +++||+||+++|.. .++++.+.+.++. +
T Consensus 53 -~~------------------~~~i~~t~d~~~-l~~aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-~- 110 (310)
T 1guz_A 53 -LF------------------DTKVTGSNDYAD-TANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHS-K- 110 (310)
T ss_dssp -TC------------------CCEEEEESCGGG-GTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-S-
T ss_pred -cC------------------CcEEEECCCHHH-HCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-C-
Confidence 00 024677788866 89999999999652 2356666666664 3
Q ss_pred CCCCEEEEeeccCcc
Q 022050 188 ITVPVIISLAKGVEA 202 (303)
Q Consensus 188 ~~~~iivs~~nGi~~ 202 (303)
++.++..+|++..
T Consensus 111 --~~~viv~tNP~~~ 123 (310)
T 1guz_A 111 --NPIIIVVSNPLDI 123 (310)
T ss_dssp --SCEEEECCSSHHH
T ss_pred --CcEEEEEcCchHH
Confidence 5777778887654
No 98
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=98.78 E-value=1.9e-08 Score=93.22 Aligned_cols=103 Identities=18% Similarity=0.125 Sum_probs=69.2
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCe--eEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKV--LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~--~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
|||+|||+|.||+++|..|+.+ | + +|.+||+++++++... ..+.. ..+..
T Consensus 1 mkI~VIGaG~vG~~la~~la~~-g-----~~~eV~L~D~~~~~~~~~~-----~~l~~-------------~~~~~---- 52 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLR-G-----SCSELVLVDRDEDRAQAEA-----EDIAH-------------AAPVS---- 52 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-----CCSEEEEECSSHHHHHHHH-----HHHTT-------------SCCTT----
T ss_pred CEEEEECCCHHHHHHHHHHHhC-C-----CCCEEEEEeCCHHHHHHHH-----Hhhhh-------------hhhhc----
Confidence 7999999999999999999998 8 6 8999999986553210 00000 00000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch----------------hHHHHHHHHHHHhh
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST----------------ETKEVFEEISRYWK 185 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~----------------~~~~vl~~l~~~l~ 185 (303)
. ...+.. ++. +++++||+||++++.. .++++++++.++.
T Consensus 53 ~----------------------~~~i~~-~~~-~a~~~aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~- 107 (304)
T 2v6b_A 53 H----------------------GTRVWH-GGH-SELADAQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAA- 107 (304)
T ss_dssp S----------------------CCEEEE-ECG-GGGTTCSEEEECC------------CHHHHHHHHHHHHHHHHHHC-
T ss_pred C----------------------CeEEEE-CCH-HHhCCCCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhC-
Confidence 0 012333 454 5789999999999443 3477888888874
Q ss_pred ccCCCCEEEEeeccCcc
Q 022050 186 ERITVPVIISLAKGVEA 202 (303)
Q Consensus 186 ~~~~~~iivs~~nGi~~ 202 (303)
+ +++++..+|+...
T Consensus 108 p---~~~vi~~tNP~~~ 121 (304)
T 2v6b_A 108 P---DAVLLVTSNPVDL 121 (304)
T ss_dssp S---SSEEEECSSSHHH
T ss_pred C---CeEEEEecCchHH
Confidence 4 6787778888654
No 99
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=98.77 E-value=2.4e-08 Score=89.27 Aligned_cols=129 Identities=9% Similarity=0.063 Sum_probs=87.1
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
..|||+|||+|.||+++|..|.++ | ++|++|++.+
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~-G-----~~V~~~~~~~--------------------------------------- 39 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSV-G-----HYVTVLHAPE--------------------------------------- 39 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHT-T-----CEEEECSSGG---------------------------------------
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHC-C-----CEEEEecCHH---------------------------------------
Confidence 458999999999999999999999 8 8999988731
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeeccCc
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nGi~ 201 (303)
+ +.+|| |++||...+.++++++.+++++ +++|++++..+.
T Consensus 40 ----------------------------------~-~~~aD--ilavP~~ai~~vl~~l~~~l~~---g~ivvd~sgs~~ 79 (232)
T 3dfu_A 40 ----------------------------------D-IRDFE--LVVIDAHGVEGYVEKLSAFARR---GQMFLHTSLTHG 79 (232)
T ss_dssp ----------------------------------G-GGGCS--EEEECSSCHHHHHHHHHTTCCT---TCEEEECCSSCC
T ss_pred ----------------------------------H-hccCC--EEEEcHHHHHHHHHHHHHhcCC---CCEEEEECCcCH
Confidence 0 23578 9999999999999999988877 788877653332
Q ss_pred cccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHHHhccCceEEEEeCChhhHHHHHHHhcCCCeEEEecCC
Q 022050 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGD 276 (303)
Q Consensus 202 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~ev~~g~~~~~~~~~~~~~~~~i~~lf~~~g~~~~~~~D 276 (303)
.. ++......+. .+ +-..|-+ +.+ ..+...+.+..+.++.++...|-+++..++
T Consensus 80 ~~------------vl~~~~~~g~-~f-vg~HPm~------g~~-~~i~a~d~~a~~~l~~L~~~lG~~vv~~~~ 133 (232)
T 3dfu_A 80 IT------------VMDPLETSGG-IV-MSAHPIG------QDR-WVASALDELGETIVGLLVGELGGSIVEIAD 133 (232)
T ss_dssp GG------------GGHHHHHTTC-EE-EEEEEEE------TTE-EEEEESSHHHHHHHHHHHHHTTCEECCCCG
T ss_pred HH------------HHHHHHhCCC-cE-EEeeeCC------CCc-eeeeCCCHHHHHHHHHHHHHhCCEEEEeCH
Confidence 22 2222221111 11 1112221 222 122234566788899999988988876544
No 100
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=98.75 E-value=4.2e-08 Score=90.66 Aligned_cols=104 Identities=11% Similarity=0.005 Sum_probs=69.3
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCe--eEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKV--LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~--~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
|||+|||+|.||+++|..|+.+ | + +|.+||+++++++.... -++.. ++ +++
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~-~-----~~~~v~L~D~~~~~~~g~~~-----dl~~~---------~~-~~~------ 53 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLN-L-----DVDEIALVDIAEDLAVGEAM-----DLAHA---------AA-GID------ 53 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-S-----CCSEEEEECSSHHHHHHHHH-----HHHHH---------HH-TTT------
T ss_pred CEEEEECCCHHHHHHHHHHHhC-C-----CCCeEEEEECChHHHHHHHH-----HHHhh---------hh-hcC------
Confidence 7999999999999999999998 7 5 89999999987642110 01100 00 010
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch----------------hHHHHHHHHHHHhh
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST----------------ETKEVFEEISRYWK 185 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~----------------~~~~vl~~l~~~l~ 185 (303)
. ..++.+++| .+++++||+||++.... .++++.+++.++.
T Consensus 54 ----~------------------~~~i~~t~d-~~a~~~aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~- 109 (294)
T 1oju_A 54 ----K------------------YPKIVGGAD-YSLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENA- 109 (294)
T ss_dssp ----C------------------CCEEEEESC-GGGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTS-
T ss_pred ----C------------------CCEEEEeCC-HHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC-
Confidence 0 024667778 67899999999987321 2344555555553
Q ss_pred ccCCCCEEEEeeccCc
Q 022050 186 ERITVPVIISLAKGVE 201 (303)
Q Consensus 186 ~~~~~~iivs~~nGi~ 201 (303)
+ +++++..+|.+.
T Consensus 110 p---~a~iivvsNPvd 122 (294)
T 1oju_A 110 P---ESKILVVTNPMD 122 (294)
T ss_dssp T---TCEEEECSSSHH
T ss_pred C---CeEEEEeCCcch
Confidence 3 678888887654
No 101
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=98.73 E-value=8.5e-08 Score=88.94 Aligned_cols=109 Identities=18% Similarity=0.246 Sum_probs=69.6
Q ss_pred HhccCCCCCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccc
Q 022050 35 LMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYL 114 (303)
Q Consensus 35 ~~~~~~~~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l 114 (303)
+.++....++||+|||+|.||..+|..++.. |.. .+|.|+|++++ ..... .. +
T Consensus 6 ~~~~~~~~~~kV~ViGaG~vG~~~a~~l~~~-g~~---~ev~L~Di~~~-~~g~a-------~d---------------l 58 (303)
T 2i6t_A 6 WANHENKTVNKITVVGGGELGIACTLAISAK-GIA---DRLVLLDLSEG-TKGAT-------MD---------------L 58 (303)
T ss_dssp --------CCEEEEECCSHHHHHHHHHHHHH-TCC---SEEEEECCC------CH-------HH---------------H
T ss_pred cccccCCCCCEEEEECCCHHHHHHHHHHHhc-CCC---CEEEEEcCCcc-hHHHH-------HH---------------H
Confidence 3444445568999999999999999999998 821 28999999986 32100 00 0
Q ss_pred hhhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEec-------------Cch--hHHHHHHH
Q 022050 115 KYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGL-------------PST--ETKEVFEE 179 (303)
Q Consensus 115 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaV-------------p~~--~~~~vl~~ 179 (303)
... .. ++++.++|. +++++||+||+++ +.. .+.+++++
T Consensus 59 ~~~-------~~-------------------~~i~~t~d~-~~l~~aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~ 111 (303)
T 2i6t_A 59 EIF-------NL-------------------PNVEISKDL-SASAHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPA 111 (303)
T ss_dssp HHH-------TC-------------------TTEEEESCG-GGGTTCSEEEECCCC----CCHHHHHHHHHHHHHHHHHH
T ss_pred hhh-------cC-------------------CCeEEeCCH-HHHCCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 000 00 156777888 6789999999997 222 36788888
Q ss_pred HHHHhhccCCCCEEEEeeccCc
Q 022050 180 ISRYWKERITVPVIISLAKGVE 201 (303)
Q Consensus 180 l~~~l~~~~~~~iivs~~nGi~ 201 (303)
+.++. + +++++..+|.+.
T Consensus 112 i~~~~-p---~a~iiv~sNP~~ 129 (303)
T 2i6t_A 112 LGHYS-Q---HSVLLVASQPVE 129 (303)
T ss_dssp HHHHT-T---TCEEEECSSSHH
T ss_pred HHHhC-C---CeEEEEcCChHH
Confidence 88886 4 578777887644
No 102
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=98.69 E-value=2.5e-08 Score=93.78 Aligned_cols=93 Identities=18% Similarity=0.255 Sum_probs=71.9
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
..++|+|||+|.||.++|..++.. | ++|.+|+|+++..+
T Consensus 163 ~g~~vgIIG~G~iG~~vA~~l~~~-G-----~~V~~~dr~~~~~~----------------------------------- 201 (333)
T 3ba1_A 163 SGKRVGIIGLGRIGLAVAERAEAF-D-----CPISYFSRSKKPNT----------------------------------- 201 (333)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTT-T-----CCEEEECSSCCTTC-----------------------------------
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-C-----CEEEEECCCchhcc-----------------------------------
Confidence 347999999999999999999987 8 89999999875210
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH-HHHHHHhhccCCCCEEEEeecc
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKG 199 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~-~~~~vl-~~l~~~l~~~~~~~iivs~~nG 199 (303)
......++++++++||+|++++|.. .++.++ +++...+++ ++++|++..|
T Consensus 202 -------------------------g~~~~~~l~ell~~aDvVil~vP~~~~t~~li~~~~l~~mk~---gailIn~srG 253 (333)
T 3ba1_A 202 -------------------------NYTYYGSVVELASNSDILVVACPLTPETTHIINREVIDALGP---KGVLINIGRG 253 (333)
T ss_dssp -------------------------CSEEESCHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHHCT---TCEEEECSCG
T ss_pred -------------------------CceecCCHHHHHhcCCEEEEecCCChHHHHHhhHHHHhcCCC---CCEEEECCCC
Confidence 1223457888889999999999986 455555 344556777 7899999888
Q ss_pred Cccc
Q 022050 200 VEAE 203 (303)
Q Consensus 200 i~~~ 203 (303)
-...
T Consensus 254 ~~vd 257 (333)
T 3ba1_A 254 PHVD 257 (333)
T ss_dssp GGBC
T ss_pred chhC
Confidence 6654
No 103
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=98.67 E-value=6.2e-08 Score=95.11 Aligned_cols=111 Identities=15% Similarity=0.236 Sum_probs=76.1
Q ss_pred CceEEEECCChH-HHHHHHHHHHhc-CCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhh
Q 022050 43 PLRIVGVGAGAW-GSVFTAMLQDSY-GYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (303)
Q Consensus 43 ~~kI~VIGaG~m-G~aiA~~La~~~-G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (303)
.|||+|||+|++ |.++|..|+.+. + +. .++|.|||+++++++.++. + .. .+++..
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~~~~-l~-~~eV~L~Di~~e~~~~~~~--~----~~------------~~l~~~--- 84 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDHLEE-FP-IRKLKLYDNDKERQDRIAG--A----CD------------VFIREK--- 84 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTT-SC-EEEEEEECSCHHHHHHHHH--H----HH------------HHHHHH---
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCCC-CC-CCEEEEEeCCHHHHHHHHH--H----HH------------HHhccC---
Confidence 379999999999 667887777651 1 11 1789999999987765321 0 00 112211
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh----------------------------
Q 022050 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE---------------------------- 172 (303)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~---------------------------- 172 (303)
.++ .++.+++|..+++++||+||+++|...
T Consensus 85 ----~~~------------------~~I~~t~D~~eal~~AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~ 142 (472)
T 1u8x_X 85 ----APD------------------IEFAATTDPEEAFTDVDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIA 142 (472)
T ss_dssp ----CTT------------------SEEEEESCHHHHHSSCSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHH
T ss_pred ----CCC------------------CEEEEECCHHHHHcCCCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHH
Confidence 110 257888899889999999999998842
Q ss_pred --------HHHHHHHHHHHhhccCCCCEEEEeeccCcc
Q 022050 173 --------TKEVFEEISRYWKERITVPVIISLAKGVEA 202 (303)
Q Consensus 173 --------~~~vl~~l~~~l~~~~~~~iivs~~nGi~~ 202 (303)
+.++++++.++.+ +++++..+|.+..
T Consensus 143 ~~~rni~i~~~i~~~i~~~~P----~A~ii~~TNPvdi 176 (472)
T 1u8x_X 143 YGMRSIGGVLEILDYMEKYSP----DAWMLNYSNPAAI 176 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHCT----TCEEEECCSCHHH
T ss_pred HHhhhHHHHHHHHHHHHHHCC----CeEEEEeCCcHHH
Confidence 4566666777654 6889989988654
No 104
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=98.62 E-value=3e-07 Score=85.30 Aligned_cols=104 Identities=13% Similarity=0.058 Sum_probs=69.8
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCe-eEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~-~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
|||+|||+|.||..+|..++.. | + +|.++|+++++++... .-+.. .....
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~-g-----~~~v~L~Di~~~~~~g~~-----~dl~~-------------~~~~~----- 53 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAK-E-----LGDIVLLDIVEGVPQGKA-----LDLYE-------------ASPIE----- 53 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-----CSEEEEECSSSSHHHHHH-----HHHHT-------------THHHH-----
T ss_pred CEEEEECCCHHHHHHHHHHHHC-C-----CCeEEEEeCCccHHHHHH-----HhHHH-------------hHhhc-----
Confidence 7999999999999999999998 8 5 7999999987664211 00110 00000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch----------------hHHHHHHHHHHHhhc
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST----------------ETKEVFEEISRYWKE 186 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~----------------~~~~vl~~l~~~l~~ 186 (303)
. ...++..++|. +++++||+||+++... .+.++++++.++. +
T Consensus 54 --~------------------~~~~i~~t~d~-~a~~~aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p 111 (309)
T 1ur5_A 54 --G------------------FDVRVTGTNNY-ADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLS-P 111 (309)
T ss_dssp --T------------------CCCCEEEESCG-GGGTTCSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGC-T
T ss_pred --C------------------CCeEEEECCCH-HHHCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-C
Confidence 0 00257777888 6799999999998321 2345666666654 4
Q ss_pred cCCCCEEEEeeccCc
Q 022050 187 RITVPVIISLAKGVE 201 (303)
Q Consensus 187 ~~~~~iivs~~nGi~ 201 (303)
+++++..+|.+.
T Consensus 112 ---~a~vi~~tNPv~ 123 (309)
T 1ur5_A 112 ---NAVIIMVNNPLD 123 (309)
T ss_dssp ---TCEEEECCSSHH
T ss_pred ---CeEEEEcCCchH
Confidence 577766777644
No 105
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=98.62 E-value=3.8e-07 Score=85.36 Aligned_cols=106 Identities=14% Similarity=0.126 Sum_probs=72.1
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCe-eEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~-~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
+|||+|||+|.||.++|..|+.+ | + +|.+||+++++++.... .+... ++ ++ .
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~-~-----~~~v~L~Di~~~~~~g~~~-----dl~~~---------~~-~~-~----- 59 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLK-E-----LGDVVLFDIAEGTPQGKGL-----DIAES---------SP-VD-G----- 59 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEECSSSSHHHHHHH-----HHHHH---------HH-HH-T-----
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-----CCeEEEEeCCchhHHHHHH-----HHhch---------hh-hc-C-----
Confidence 47999999999999999999998 8 6 99999999987642110 01110 00 00 0
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCc----------------hhHHHHHHHHHHHhh
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS----------------TETKEVFEEISRYWK 185 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~----------------~~~~~vl~~l~~~l~ 185 (303)
. ...+.+++|. +++++||+||++... ..++++.+++..+.
T Consensus 60 ----~------------------~~~v~~t~d~-~a~~~aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~- 115 (324)
T 3gvi_A 60 ----F------------------DAKFTGANDY-AAIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYA- 115 (324)
T ss_dssp ----C------------------CCCEEEESSG-GGGTTCSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHC-
T ss_pred ----C------------------CCEEEEeCCH-HHHCCCCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHC-
Confidence 0 0256777787 689999999998732 12456666666665
Q ss_pred ccCCCCEEEEeeccCcc
Q 022050 186 ERITVPVIISLAKGVEA 202 (303)
Q Consensus 186 ~~~~~~iivs~~nGi~~ 202 (303)
+ +++++..+|.+..
T Consensus 116 p---~a~iivvtNPvd~ 129 (324)
T 3gvi_A 116 P---EAFVICITNPLDA 129 (324)
T ss_dssp T---TCEEEECCSSHHH
T ss_pred C---CeEEEecCCCcHH
Confidence 3 6788888876543
No 106
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=98.61 E-value=4.8e-08 Score=91.50 Aligned_cols=94 Identities=18% Similarity=0.219 Sum_probs=69.9
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
-|+|+|||+|.||..+|..++.. | ++|++|+|++++.+.. ..
T Consensus 155 g~~vgIIG~G~iG~~iA~~l~~~-G-----~~V~~~d~~~~~~~~~--------------------------~~------ 196 (330)
T 2gcg_A 155 QSTVGIIGLGRIGQAIARRLKPF-G-----VQRFLYTGRQPRPEEA--------------------------AE------ 196 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGG-T-----CCEEEEESSSCCHHHH--------------------------HT------
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-C-----CEEEEECCCCcchhHH--------------------------Hh------
Confidence 48999999999999999999988 8 8999999987643210 00
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH-HHHHHHhhccCCCCEEEEeeccC
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKGV 200 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~-~~~~vl-~~l~~~l~~~~~~~iivs~~nGi 200 (303)
..+..+ ++++++++||+|++++|.. .++.++ +++.+.+++ ++++|....|-
T Consensus 197 -----------------------~g~~~~-~l~e~l~~aDvVi~~vp~~~~t~~~i~~~~~~~mk~---gailIn~srg~ 249 (330)
T 2gcg_A 197 -----------------------FQAEFV-STPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKE---TAVFINISRGD 249 (330)
T ss_dssp -----------------------TTCEEC-CHHHHHHHCSEEEECCCCCTTTTTCBSHHHHHHSCT---TCEEEECSCGG
T ss_pred -----------------------cCceeC-CHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhcCCC---CcEEEECCCCc
Confidence 023333 6778889999999999986 345444 455566776 78888888774
Q ss_pred c
Q 022050 201 E 201 (303)
Q Consensus 201 ~ 201 (303)
.
T Consensus 250 ~ 250 (330)
T 2gcg_A 250 V 250 (330)
T ss_dssp G
T ss_pred c
Confidence 3
No 107
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=98.61 E-value=5.8e-08 Score=91.12 Aligned_cols=96 Identities=19% Similarity=0.303 Sum_probs=72.6
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
..|+|+|||+|.||..+|..++.. | ++|.+|+|+++. +.. ...
T Consensus 149 ~g~~vgIIG~G~iG~~iA~~l~~~-G-----~~V~~~d~~~~~-~~~--------------------------~~~---- 191 (334)
T 2dbq_A 149 YGKTIGIIGLGRIGQAIAKRAKGF-N-----MRILYYSRTRKE-EVE--------------------------REL---- 191 (334)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCH-HHH--------------------------HHH----
T ss_pred CCCEEEEEccCHHHHHHHHHHHhC-C-----CEEEEECCCcch-hhH--------------------------hhc----
Confidence 358999999999999999999988 8 899999998864 210 000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh-HHHHH-HHHHHHhhccCCCCEEEEeecc
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE-TKEVF-EEISRYWKERITVPVIISLAKG 199 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~-~~~vl-~~l~~~l~~~~~~~iivs~~nG 199 (303)
.+.. .++++++++||+|++++|... ++.++ +++.+.+++ ++++|++.+|
T Consensus 192 -------------------------g~~~-~~l~~~l~~aDvVil~vp~~~~t~~~i~~~~~~~mk~---~ailIn~srg 242 (334)
T 2dbq_A 192 -------------------------NAEF-KPLEDLLRESDFVVLAVPLTRETYHLINEERLKLMKK---TAILINIARG 242 (334)
T ss_dssp -------------------------CCEE-CCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCT---TCEEEECSCG
T ss_pred -------------------------Cccc-CCHHHHHhhCCEEEECCCCChHHHHhhCHHHHhcCCC---CcEEEECCCC
Confidence 1223 367788899999999999975 55555 455666777 7899988888
Q ss_pred Cccc
Q 022050 200 VEAE 203 (303)
Q Consensus 200 i~~~ 203 (303)
-..+
T Consensus 243 ~~v~ 246 (334)
T 2dbq_A 243 KVVD 246 (334)
T ss_dssp GGBC
T ss_pred cccC
Confidence 5554
No 108
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=98.60 E-value=1.3e-07 Score=92.95 Aligned_cols=111 Identities=18% Similarity=0.172 Sum_probs=74.7
Q ss_pred CceEEEECCChH--HHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhh
Q 022050 43 PLRIVGVGAGAW--GSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (303)
Q Consensus 43 ~~kI~VIGaG~m--G~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (303)
+|||+|||+|+| |.++|..|++..+ +. .++|.|||+++++++.++.. .. .+++..
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~-l~-~~eV~L~Di~~e~l~~~~~~-----~~-------------~~l~~~--- 59 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPG-LS-GSTVTLMDIDEERLDAILTI-----AK-------------KYVEEV--- 59 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGG-GT-TCEEEEECSCHHHHHHHHHH-----HH-------------HHHHHT---
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCc-CC-CCEEEEEeCCHHHHHHHHHH-----HH-------------HHhccC---
Confidence 479999999995 6777888874211 10 17999999999877653211 00 111111
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-----------------------------
Q 022050 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST----------------------------- 171 (303)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~----------------------------- 171 (303)
.. ..++++++|+.+++++||+||+++++.
T Consensus 60 ----~~------------------~~~I~~ttD~~eal~dAD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~ 117 (480)
T 1obb_A 60 ----GA------------------DLKFEKTMNLDDVIIDADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMV 117 (480)
T ss_dssp ----TC------------------CCEEEEESCHHHHHTTCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCC
T ss_pred ----CC------------------CcEEEEECCHHHHhCCCCEEEECCCcccccccccccccccccccccchhhhcCCcc
Confidence 01 025888899988899999999999752
Q ss_pred -------------hHHHHHHHHHHHhhccCCCCEEEEeeccCcc
Q 022050 172 -------------ETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (303)
Q Consensus 172 -------------~~~~vl~~l~~~l~~~~~~~iivs~~nGi~~ 202 (303)
.+.++++++..+.+ +++++..+|.+..
T Consensus 118 ~~~G~~~~~rni~i~~~i~~~i~~~~P----~A~ii~~TNPvdi 157 (480)
T 1obb_A 118 SDYYTFSNYNQLKYFVDIARKIEKLSP----KAWYLQAANPIFE 157 (480)
T ss_dssp TTCCSSSCHHHHHHHHHHHHHHHHHCT----TCEEEECSSCHHH
T ss_pred chhhhHHhhhhHHHHHHHHHHHHHHCC----CeEEEEeCCcHHH
Confidence 33566666666654 5888888887654
No 109
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=98.58 E-value=1.6e-07 Score=88.56 Aligned_cols=92 Identities=16% Similarity=0.267 Sum_probs=63.9
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
-++|+|||.|.||.++|..+... | .+|..|+|+++...
T Consensus 171 gktiGIIGlG~IG~~vA~~l~~~-G-----~~V~~~dr~~~~~~------------------------------------ 208 (340)
T 4dgs_A 171 GKRIGVLGLGQIGRALASRAEAF-G-----MSVRYWNRSTLSGV------------------------------------ 208 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-T-----CEEEEECSSCCTTS------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-C-----CEEEEEcCCccccc------------------------------------
Confidence 48999999999999999999887 8 89999999864210
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH-HHHHHHhhccCCCCEEEEeeccC
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKGV 200 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~-~~~~vl-~~l~~~l~~~~~~~iivs~~nGi 200 (303)
......++++++++||+|++++|.. .++.++ ++....+++ ++++|.+..|=
T Consensus 209 ------------------------~~~~~~sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~mk~---gailIN~aRG~ 261 (340)
T 4dgs_A 209 ------------------------DWIAHQSPVDLARDSDVLAVCVAASAATQNIVDASLLQALGP---EGIVVNVARGN 261 (340)
T ss_dssp ------------------------CCEECSSHHHHHHTCSEEEECC----------CHHHHHHTTT---TCEEEECSCC-
T ss_pred ------------------------CceecCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhcCCC---CCEEEECCCCc
Confidence 1223457888899999999999954 456665 555566777 78999988885
Q ss_pred ccc
Q 022050 201 EAE 203 (303)
Q Consensus 201 ~~~ 203 (303)
...
T Consensus 262 vvd 264 (340)
T 4dgs_A 262 VVD 264 (340)
T ss_dssp ---
T ss_pred ccC
Confidence 443
No 110
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=98.58 E-value=6e-07 Score=74.28 Aligned_cols=39 Identities=23% Similarity=0.323 Sum_probs=35.1
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
.++|+|+|+|.||..++..|... | ++|+++++++++++.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~-g-----~~V~vid~~~~~~~~ 57 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSS-G-----HSVVVVDKNEYAFHR 57 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESCGGGGGG
T ss_pred CCcEEEECCCHHHHHHHHHHHhC-C-----CeEEEEECCHHHHHH
Confidence 48999999999999999999998 8 899999999876653
No 111
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=98.56 E-value=1.8e-07 Score=91.23 Aligned_cols=107 Identities=17% Similarity=0.224 Sum_probs=76.4
Q ss_pred CceEEEECCCh--HHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhh
Q 022050 43 PLRIVGVGAGA--WGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (303)
Q Consensus 43 ~~kI~VIGaG~--mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (303)
.|||+|||+|+ ||.+++..|+.. ..+ . .+|++||++++++++++. +. ..+...
T Consensus 5 ~~KIaVIGaGs~g~g~~la~~l~~~-~~~-~-geV~L~Di~~e~le~~~~------~~-------------~~l~~~--- 59 (450)
T 3fef_A 5 QIKIAYIGGGSQGWARSLMSDLSID-ERM-S-GTVALYDLDFEAAQKNEV------IG-------------NHSGNG--- 59 (450)
T ss_dssp CEEEEEETTTCSSHHHHHHHHHHHC-SSC-C-EEEEEECSSHHHHHHHHH------HH-------------TTSTTS---
T ss_pred CCEEEEECCChhHhHHHHHHHHHhc-ccc-C-CeEEEEeCCHHHHHHHHH------HH-------------HHHhcc---
Confidence 37999999999 579999999874 212 1 489999999987765321 00 011100
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-----------------------------
Q 022050 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST----------------------------- 171 (303)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~----------------------------- 171 (303)
..++++|+|+++|+++||+||+++++.
T Consensus 60 ------------------------~~~I~~TtD~~eAl~dADfVI~airvG~~~~~~~De~ip~k~G~~~~vget~g~GG 115 (450)
T 3fef_A 60 ------------------------RWRYEAVSTLKKALSAADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGG 115 (450)
T ss_dssp ------------------------CEEEEEESSHHHHHTTCSEEEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHH
T ss_pred ------------------------CCeEEEECCHHHHhcCCCEEEeccccCCcccchhhhhhhhccCccccchhhcCCch
Confidence 025889999999999999999999741
Q ss_pred ---------hHHHHHHHHHHHhhccCCCCEEEEeeccCcc
Q 022050 172 ---------ETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (303)
Q Consensus 172 ---------~~~~vl~~l~~~l~~~~~~~iivs~~nGi~~ 202 (303)
.+.++++++..+.+ +++++..+|.+..
T Consensus 116 i~~alr~~~i~~~i~~~i~~~~p----~a~~i~~tNPvdi 151 (450)
T 3fef_A 116 IIRGLRAVPIFAEIARAIRDYAP----ESWVINYTNPMSV 151 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCT----TSEEEECCSSHHH
T ss_pred hhcccccHHHHHHHHHHHHHHCC----CeEEEEecCchHH
Confidence 15666677777654 6899999988664
No 112
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=98.55 E-value=5.8e-07 Score=83.61 Aligned_cols=108 Identities=16% Similarity=0.147 Sum_probs=69.8
Q ss_pred CCCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhh
Q 022050 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (303)
Q Consensus 41 ~~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (303)
..++||+|||+|.||.++|..++.. |.. .+|.++|++++.++... .. +.. ..+.
T Consensus 4 ~~~~kI~IIGaG~vG~sla~~l~~~-~~~---~ev~l~Di~~~~~~~~~-~d----l~~-------------~~~~---- 57 (316)
T 1ldn_A 4 NGGARVVVIGAGFVGASYVFALMNQ-GIA---DEIVLIDANESKAIGDA-MD----FNH-------------GKVF---- 57 (316)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHH-TCC---SEEEEECSSHHHHHHHH-HH----HHH-------------HTTS----
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhC-CCC---CEEEEEeCCcchHHHHH-hh----HHH-------------Hhhh----
Confidence 3568999999999999999999988 621 38999999976443210 00 100 0000
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch----------------hHHHHHHHHHHHh
Q 022050 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST----------------ETKEVFEEISRYW 184 (303)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~----------------~~~~vl~~l~~~l 184 (303)
+. .+.+++++..+++++||+||++++.. .+.++++++.++.
T Consensus 58 -----~~------------------~~~~i~~~~~~al~~aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~ 114 (316)
T 1ldn_A 58 -----AP------------------KPVDIWHGDYDDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASG 114 (316)
T ss_dssp -----SS------------------SCCEEEECCGGGTTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHT
T ss_pred -----cC------------------CCeEEEcCcHHHhCCCCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHC
Confidence 00 12344444556799999999997542 3566777777765
Q ss_pred hccCCCCEEEEeeccCc
Q 022050 185 KERITVPVIISLAKGVE 201 (303)
Q Consensus 185 ~~~~~~~iivs~~nGi~ 201 (303)
+ +++++..+|.+.
T Consensus 115 -p---~a~~iv~tNPv~ 127 (316)
T 1ldn_A 115 -F---QGLFLVATNPVD 127 (316)
T ss_dssp -C---CSEEEECSSSHH
T ss_pred -C---CCEEEEeCCchH
Confidence 3 567776777654
No 113
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=98.52 E-value=1.3e-07 Score=89.16 Aligned_cols=94 Identities=19% Similarity=0.195 Sum_probs=69.3
Q ss_pred CCceEEEECCChHHHHHHHHHH-HhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQ-DSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La-~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (303)
.-++|+|||.|.||..+|..+. .. | ++|.+|+|+++..+.. ...
T Consensus 162 ~g~~vgIIG~G~IG~~vA~~l~~~~-G-----~~V~~~d~~~~~~~~~--------------------------~~~--- 206 (348)
T 2w2k_A 162 RGHVLGAVGLGAIQKEIARKAVHGL-G-----MKLVYYDVAPADAETE--------------------------KAL--- 206 (348)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT-C-----CEEEEECSSCCCHHHH--------------------------HHH---
T ss_pred CCCEEEEEEECHHHHHHHHHHHHhc-C-----CEEEEECCCCcchhhH--------------------------hhc---
Confidence 3489999999999999999998 77 8 8999999987643310 000
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh-HHHHH-HHHHHHhhccCCCCEEEEeec
Q 022050 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE-TKEVF-EEISRYWKERITVPVIISLAK 198 (303)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~-~~~vl-~~l~~~l~~~~~~~iivs~~n 198 (303)
.+...+++++++++||+|++++|... ++.++ +++.+.+++ ++++|.+..
T Consensus 207 --------------------------g~~~~~~l~ell~~aDvVil~vp~~~~t~~li~~~~l~~mk~---gailin~sr 257 (348)
T 2w2k_A 207 --------------------------GAERVDSLEELARRSDCVSVSVPYMKLTHHLIDEAFFAAMKP---GSRIVNTAR 257 (348)
T ss_dssp --------------------------TCEECSSHHHHHHHCSEEEECCCCSGGGTTCBCHHHHHHSCT---TEEEEECSC
T ss_pred --------------------------CcEEeCCHHHHhccCCEEEEeCCCChHHHHHhhHHHHhcCCC---CCEEEECCC
Confidence 13334577788889999999999863 55554 345556776 788887777
Q ss_pred c
Q 022050 199 G 199 (303)
Q Consensus 199 G 199 (303)
|
T Consensus 258 g 258 (348)
T 2w2k_A 258 G 258 (348)
T ss_dssp G
T ss_pred C
Confidence 6
No 114
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=98.51 E-value=1.2e-07 Score=87.50 Aligned_cols=92 Identities=12% Similarity=0.173 Sum_probs=70.0
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
-++|+|||.|.||..+|..+... | ++|..|+|+++..+
T Consensus 122 g~tvGIIGlG~IG~~vA~~l~~~-G-----~~V~~~dr~~~~~~------------------------------------ 159 (290)
T 3gvx_A 122 GKALGILGYGGIGRRVAHLAKAF-G-----MRVIAYTRSSVDQN------------------------------------ 159 (290)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH-T-----CEEEEECSSCCCTT------------------------------------
T ss_pred cchheeeccCchhHHHHHHHHhh-C-----cEEEEEeccccccc------------------------------------
Confidence 47999999999999999999988 8 89999999875321
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCc-hhHHHHH-HHHHHHhhccCCCCEEEEeeccC
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS-TETKEVF-EEISRYWKERITVPVIISLAKGV 200 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~-~~~~~vl-~~l~~~l~~~~~~~iivs~~nGi 200 (303)
.....+++++++++||+|++++|. ..++.++ ++....+++ ++++|.+..|-
T Consensus 160 ------------------------~~~~~~~l~ell~~aDiV~l~~P~t~~t~~li~~~~l~~mk~---gailIN~aRG~ 212 (290)
T 3gvx_A 160 ------------------------VDVISESPADLFRQSDFVLIAIPLTDKTRGMVNSRLLANARK---NLTIVNVARAD 212 (290)
T ss_dssp ------------------------CSEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTCCT---TCEEEECSCGG
T ss_pred ------------------------cccccCChHHHhhccCeEEEEeeccccchhhhhHHHHhhhhc---CceEEEeehhc
Confidence 122345788888999999999995 3444444 445556777 78999888775
Q ss_pred ccc
Q 022050 201 EAE 203 (303)
Q Consensus 201 ~~~ 203 (303)
...
T Consensus 213 ~vd 215 (290)
T 3gvx_A 213 VVS 215 (290)
T ss_dssp GBC
T ss_pred ccC
Confidence 543
No 115
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=98.51 E-value=3.1e-07 Score=89.61 Aligned_cols=111 Identities=13% Similarity=0.154 Sum_probs=76.0
Q ss_pred CceEEEECCChH-HHHHHHHHHHh-cCCCCCCeeEEEEecCC--chhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhh
Q 022050 43 PLRIVGVGAGAW-GSVFTAMLQDS-YGYLRDKVLIRIWRRPG--RSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVE 118 (303)
Q Consensus 43 ~~kI~VIGaG~m-G~aiA~~La~~-~G~~~~~~~V~l~~r~~--~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~ 118 (303)
.|||+|||+|++ |.+++..|+.+ .+ +. .++|.|||+++ ++++.++. + .. .+++..
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~~~~~-l~-~~ev~L~Di~~~~e~~~~~~~--~----~~------------~~~~~~- 65 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHE-LP-VGELWLVDIPEGKEKLEIVGA--L----AK------------RMVEKA- 65 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTT-CC-EEEEEEECCGGGHHHHHHHHH--H----HH------------HHHHHT-
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCC-CC-CCEEEEEEcCCChHHHHHHHH--H----HH------------HHHhhc-
Confidence 489999999999 88888888872 13 11 16899999999 87664321 0 00 011111
Q ss_pred hhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh--------------------------
Q 022050 119 ARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE-------------------------- 172 (303)
Q Consensus 119 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~-------------------------- 172 (303)
..+ .++.+++|..+++++||+||++++...
T Consensus 66 ------~~~------------------~~i~~t~D~~eal~gAD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~gg 121 (450)
T 1s6y_A 66 ------GVP------------------IEIHLTLDRRRALDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGG 121 (450)
T ss_dssp ------TCC------------------CEEEEESCHHHHHTTCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHH
T ss_pred ------CCC------------------cEEEEeCCHHHHhCCCCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccch
Confidence 010 257788899889999999999998632
Q ss_pred ----------HHHHHHHHHHHhhccCCCCEEEEeeccCcc
Q 022050 173 ----------TKEVFEEISRYWKERITVPVIISLAKGVEA 202 (303)
Q Consensus 173 ----------~~~vl~~l~~~l~~~~~~~iivs~~nGi~~ 202 (303)
+.++++++..+.+ +++++..+|.+..
T Consensus 122 i~~~~rni~i~~~i~~~i~~~~P----~a~ii~~tNPvdi 157 (450)
T 1s6y_A 122 LFKGLRTIPVILDIIRDMEELCP----DAWLINFTNPAGM 157 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCT----TCEEEECSSSHHH
T ss_pred HHHHhhhHHHHHHHHHHHHHHCC----CeEEEEeCCcHHH
Confidence 4566666666654 6889988988654
No 116
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=98.51 E-value=6.5e-07 Score=83.43 Aligned_cols=106 Identities=17% Similarity=0.180 Sum_probs=65.5
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
.+|||+|||+|.+|.+++..|+.. |.+ .+|.++|+++++++... ..+.. ..+
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~-~~~---~ev~L~Di~~~~~~g~~-----~dl~~-------------~~~------ 57 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALR-QTA---NELVLIDVFKEKAIGEA-----MDINH-------------GLP------ 57 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHT-TCS---SEEEEECCC---CCHHH-----HHHTT-------------SCC------
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCC---CEEEEEeCChHHHHHHH-----HHHHH-------------hHH------
Confidence 458999999999999999999998 721 28999999987664210 00110 000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh----------------HHHHHHHHHHHhh
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE----------------TKEVFEEISRYWK 185 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~----------------~~~vl~~l~~~l~ 185 (303)
+ ..+++++.+..+++++||+||++++... +.++.+.+.++.
T Consensus 58 ----~------------------~~~~~i~~~~~~a~~~aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~- 114 (318)
T 1y6j_A 58 ----F------------------MGQMSLYAGDYSDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYY- 114 (318)
T ss_dssp ----C------------------TTCEEEC--CGGGGTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred ----h------------------cCCeEEEECCHHHhCCCCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhC-
Confidence 0 0123333233567899999999986532 466777777764
Q ss_pred ccCCCCEEEEeeccCc
Q 022050 186 ERITVPVIISLAKGVE 201 (303)
Q Consensus 186 ~~~~~~iivs~~nGi~ 201 (303)
+ +++++..+|.+.
T Consensus 115 p---~a~viv~tNPv~ 127 (318)
T 1y6j_A 115 N---HGVILVVSNPVD 127 (318)
T ss_dssp C---SCEEEECSSSHH
T ss_pred C---CcEEEEecCcHH
Confidence 4 567776777644
No 117
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.50 E-value=8.4e-07 Score=70.89 Aligned_cols=39 Identities=18% Similarity=0.207 Sum_probs=34.4
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
.|+|+|+|+|.+|..++..|.+. | ++|++++++++.++.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~-g-----~~v~~~d~~~~~~~~ 42 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEK-G-----HDIVLIDIDKDICKK 42 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-----CeEEEEECCHHHHHH
Confidence 38999999999999999999998 8 899999998876543
No 118
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=98.49 E-value=1.5e-07 Score=88.40 Aligned_cols=96 Identities=22% Similarity=0.327 Sum_probs=71.4
Q ss_pred CCCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhh
Q 022050 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (303)
Q Consensus 41 ~~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (303)
-.-++|+|||+|.||.++|..++.. | ++|.+|+|+++. +.. ...
T Consensus 144 l~g~~vgIIG~G~iG~~vA~~l~~~-G-----~~V~~~d~~~~~-~~~--------------------------~~~--- 187 (333)
T 2d0i_A 144 LYGKKVGILGMGAIGKAIARRLIPF-G-----VKLYYWSRHRKV-NVE--------------------------KEL--- 187 (333)
T ss_dssp STTCEEEEECCSHHHHHHHHHHGGG-T-----CEEEEECSSCCH-HHH--------------------------HHH---
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHC-C-----CEEEEECCCcch-hhh--------------------------hhc---
Confidence 3458999999999999999999988 8 899999998863 210 000
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHHH-HHHHHhhccCCCCEEEEeec
Q 022050 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVFE-EISRYWKERITVPVIISLAK 198 (303)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~-~~~~vl~-~l~~~l~~~~~~~iivs~~n 198 (303)
.+.. .++++++++||+|++++|.. .++.++. ++.+.+++ + +++.+.+
T Consensus 188 --------------------------g~~~-~~l~e~l~~aDiVil~vp~~~~t~~~i~~~~~~~mk~---g-ilin~sr 236 (333)
T 2d0i_A 188 --------------------------KARY-MDIDELLEKSDIVILALPLTRDTYHIINEERVKKLEG---K-YLVNIGR 236 (333)
T ss_dssp --------------------------TEEE-CCHHHHHHHCSEEEECCCCCTTTTTSBCHHHHHHTBT---C-EEEECSC
T ss_pred --------------------------Ccee-cCHHHHHhhCCEEEEcCCCChHHHHHhCHHHHhhCCC---C-EEEECCC
Confidence 1333 36777888999999999997 5566553 44556777 8 8888888
Q ss_pred cCccc
Q 022050 199 GVEAE 203 (303)
Q Consensus 199 Gi~~~ 203 (303)
|-..+
T Consensus 237 g~~vd 241 (333)
T 2d0i_A 237 GALVD 241 (333)
T ss_dssp GGGBC
T ss_pred CcccC
Confidence 76554
No 119
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=98.44 E-value=1.2e-06 Score=81.99 Aligned_cols=41 Identities=17% Similarity=0.166 Sum_probs=34.8
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (303)
.+|||+|||+|.||+++|..|+.. |.. .+|.++|+++++++
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~-~~~---~~l~l~D~~~~k~~ 44 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQ-GIT---DELVVIDVNKEKAM 44 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHH-TCC---SEEEEECSCHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCC---ceEEEEecchHHHH
Confidence 358999999999999999999998 721 28999999887654
No 120
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=98.44 E-value=1.5e-06 Score=80.62 Aligned_cols=103 Identities=17% Similarity=0.166 Sum_probs=70.6
Q ss_pred eEEEECCChHHHHHHHHHHHhcCCCCCCe-eEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhcC
Q 022050 45 RIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (303)
Q Consensus 45 kI~VIGaG~mG~aiA~~La~~~G~~~~~~-~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (303)
||+|||+|.||.++|..++.. | . +|.|+|+++++++... . -+... .... .
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~-~-----l~el~L~Di~~~~~~g~~-~----dl~~~-------------~~~~----~- 51 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMR-G-----YDDLLLIARTPGKPQGEA-L----DLAHA-------------AAEL----G- 51 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-T-----CSCEEEECSSTTHHHHHH-H----HHHHH-------------HHHH----T-
T ss_pred CEEEECcCHHHHHHHHHHHhC-C-----CCEEEEEcCChhhHHHHH-H----HHHHh-------------hhhc----C-
Confidence 799999999999999999988 7 4 6999999987664211 0 01100 0000 0
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch----------------hHHHHHHHHHHHhhcc
Q 022050 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST----------------ETKEVFEEISRYWKER 187 (303)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~----------------~~~~vl~~l~~~l~~~ 187 (303)
....+..++|. +++++||+||++.+.. .++++++++.++. +
T Consensus 52 --------------------~~~~i~~t~d~-~a~~~aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~-p- 108 (308)
T 2d4a_B 52 --------------------VDIRISGSNSY-EDMRGSDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYA-K- 108 (308)
T ss_dssp --------------------CCCCEEEESCG-GGGTTCSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHC-T-
T ss_pred --------------------CCeEEEECCCH-HHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHC-C-
Confidence 00257777787 5799999999996443 2677888888775 4
Q ss_pred CCCCEEEEeeccCc
Q 022050 188 ITVPVIISLAKGVE 201 (303)
Q Consensus 188 ~~~~iivs~~nGi~ 201 (303)
++.++..+|.+.
T Consensus 109 --~a~iiv~tNPv~ 120 (308)
T 2d4a_B 109 --DAIVVITTNPVD 120 (308)
T ss_dssp --TCEEEECCSSHH
T ss_pred --CeEEEEeCCchH
Confidence 577777787654
No 121
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=98.44 E-value=1.7e-06 Score=80.73 Aligned_cols=106 Identities=13% Similarity=0.119 Sum_probs=70.5
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCe-eEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~-~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
+|||+|||+|.||.++|..|+.+ | . +|.++|+++++++... ..++. .....
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~-~-----~~~v~l~Di~~~~~~g~a-----~dL~~-------------~~~~~---- 56 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIK-Q-----LGDVVLFDIAQGMPNGKA-----LDLLQ-------------TCPIE---- 56 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEECSSSSHHHHHH-----HHHHT-------------THHHH----
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-----CceEEEEeCChHHHHHHH-----HHHHh-------------hhhhc----
Confidence 48999999999999999999998 7 5 8999999997654211 00110 00000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCc----------------hhHHHHHHHHHHHhh
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS----------------TETKEVFEEISRYWK 185 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~----------------~~~~~vl~~l~~~l~ 185 (303)
+ . ...+..++|. +++++||+||++... ..++++.+++..+.
T Consensus 57 ~---~------------------~~~v~~t~d~-~a~~~aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~- 113 (321)
T 3p7m_A 57 G---V------------------DFKVRGTNDY-KDLENSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNC- 113 (321)
T ss_dssp T---C------------------CCCEEEESCG-GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred C---C------------------CcEEEEcCCH-HHHCCCCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHC-
Confidence 0 0 0246666675 578999999998632 13556666677765
Q ss_pred ccCCCCEEEEeeccCcc
Q 022050 186 ERITVPVIISLAKGVEA 202 (303)
Q Consensus 186 ~~~~~~iivs~~nGi~~ 202 (303)
+ +++++..+|.+..
T Consensus 114 p---~a~vivvtNPvd~ 127 (321)
T 3p7m_A 114 P---NAFVICITNPLDI 127 (321)
T ss_dssp T---TCEEEECCSSHHH
T ss_pred C---CcEEEEecCchHH
Confidence 3 5777777776543
No 122
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=98.42 E-value=1.5e-06 Score=81.03 Aligned_cols=39 Identities=10% Similarity=0.155 Sum_probs=33.9
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhh
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (303)
|||+|||+|.||.++|..++.+ |.. .+|.++|+++++++
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~-~~~---~el~l~D~~~~k~~ 39 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQ-DVA---KEVVMVDIKDGMPQ 39 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCS---SEEEEECSSTTHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCC---CEEEEEeCchHHHH
Confidence 8999999999999999999998 721 38999999997654
No 123
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=98.41 E-value=1.2e-06 Score=82.24 Aligned_cols=107 Identities=8% Similarity=-0.054 Sum_probs=72.7
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
..+||+|||+|.||.++|..++.+ |.+ .+|.++|+++++++.... -++.. . .+.
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~-g~~---~ev~L~Di~~~~~~g~a~-----DL~~~---------~-~~~------- 73 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMK-DLA---DEVALVDVMEDKLKGEMM-----DLEHG---------S-LFL------- 73 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHH-CCC---SEEEEECSCHHHHHHHHH-----HHHHH---------G-GGS-------
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCC---CeEEEEECCHHHHHHHHH-----Hhhhh---------h-hcc-------
Confidence 458999999999999999999998 832 389999998876543110 01100 0 000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCc----------------hhHHHHHHHHHHHhh
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS----------------TETKEVFEEISRYWK 185 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~----------------~~~~~vl~~l~~~l~ 185 (303)
. ...+..++|.++ +++||+||++... ..++++.+++.++ .
T Consensus 74 ---~-------------------~~~i~~t~d~~~-~~daDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~-~ 129 (330)
T 3ldh_A 74 ---H-------------------TAKIVSGKDYSV-SAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKH-S 129 (330)
T ss_dssp ---C-------------------CSEEEEESSSCS-CSSCSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHH-C
T ss_pred ---c-------------------CCeEEEcCCHHH-hCCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh-C
Confidence 0 024667778865 8999999998622 1366777788777 3
Q ss_pred ccCCCCEEEEeeccCc
Q 022050 186 ERITVPVIISLAKGVE 201 (303)
Q Consensus 186 ~~~~~~iivs~~nGi~ 201 (303)
+ +++++..+|...
T Consensus 130 P---~a~ilvvtNPvd 142 (330)
T 3ldh_A 130 P---DCLKELHPELGT 142 (330)
T ss_dssp T---TCEEEECSSSHH
T ss_pred C---CceEEeCCCccH
Confidence 4 678888887644
No 124
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=98.40 E-value=2.2e-06 Score=80.13 Aligned_cols=110 Identities=19% Similarity=0.165 Sum_probs=71.0
Q ss_pred CCCCCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhh
Q 022050 39 AEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVE 118 (303)
Q Consensus 39 ~~~~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~ 118 (303)
.....|||+|||+|.+|.+++..++.. +.+ .++.|+|+++++++... .-+.. ..+ +
T Consensus 5 ~~~~~~KI~IiGaG~vG~~la~~l~~~-~~~---~el~L~Di~~~~~~g~~-----~dl~~-------------~~~-~- 60 (326)
T 2zqz_A 5 TDKDHQKVILVGDGAVGSSYAYAMVLQ-GIA---QEIGIVDIFKDKTKGDA-----IDLSN-------------ALP-F- 60 (326)
T ss_dssp -CCCCCEEEEECCSHHHHHHHHHHHHH-TCC---SEEEEECSCHHHHHHHH-----HHHHT-------------TGG-G-
T ss_pred ccCCCCEEEEECCCHHHHHHHHHHHcC-CCC---CEEEEEeCCchHhHHHH-----HHHHH-------------HHH-h-
Confidence 445568999999999999999999988 632 38999999887654211 00110 000 0
Q ss_pred hhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch----------------hHHHHHHHHHH
Q 022050 119 ARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST----------------ETKEVFEEISR 182 (303)
Q Consensus 119 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~----------------~~~~vl~~l~~ 182 (303)
..+++++.+..+++++||+||++.+.. .+.++.+.+..
T Consensus 61 --------------------------~~~~~i~~~~~~a~~~aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~ 114 (326)
T 2zqz_A 61 --------------------------TSPKKIYSAEYSDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVD 114 (326)
T ss_dssp --------------------------SCCCEEEECCGGGGGGCSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------cCCeEEEECCHHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 013444445567899999999998542 24445555666
Q ss_pred HhhccCCCCEEEEeeccCcc
Q 022050 183 YWKERITVPVIISLAKGVEA 202 (303)
Q Consensus 183 ~l~~~~~~~iivs~~nGi~~ 202 (303)
+. + ++.++..+|.+..
T Consensus 115 ~~-p---~a~iiv~tNPv~~ 130 (326)
T 2zqz_A 115 SG-F---NGIFLVAANPVDI 130 (326)
T ss_dssp HT-C---CSEEEECSSSHHH
T ss_pred HC-C---CeEEEEeCCcHHH
Confidence 54 4 5777777877543
No 125
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=98.38 E-value=2.8e-07 Score=83.92 Aligned_cols=120 Identities=21% Similarity=0.234 Sum_probs=75.1
Q ss_pred cCcceeccCCchhhhhhHHHHHhccCCCCCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhH
Q 022050 14 SNGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHL 93 (303)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l 93 (303)
.+|-+..+|-...--+..+++. +. +-..+||+|||+|.||.+++..|++. | .+|++|+|++++.+++.
T Consensus 102 ~~g~~~g~nTd~~G~~~~l~~~-~~-~~~~~~v~iiGaG~~g~aia~~L~~~-g-----~~V~v~~r~~~~~~~l~---- 169 (275)
T 2hk9_A 102 ENGKAYGYNTDWIGFLKSLKSL-IP-EVKEKSILVLGAGGASRAVIYALVKE-G-----AKVFLWNRTKEKAIKLA---- 169 (275)
T ss_dssp ETTEEEEECCHHHHHHHHHHHH-CT-TGGGSEEEEECCSHHHHHHHHHHHHH-T-----CEEEEECSSHHHHHHHT----
T ss_pred eCCEEEeecCCHHHHHHHHHHh-CC-CcCCCEEEEECchHHHHHHHHHHHHc-C-----CEEEEEECCHHHHHHHH----
Confidence 4554444443333333333332 11 22348999999999999999999998 8 79999999986544211
Q ss_pred HHHHhhhhhHHHHhhhhcccchhhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhH
Q 022050 94 FEVINSREDVLRRLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTET 173 (303)
Q Consensus 94 ~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~ 173 (303)
. . ..+.+.+++.++++++|+||.++|....
T Consensus 170 ---------------------~---------~--------------------~g~~~~~~~~~~~~~aDiVi~atp~~~~ 199 (275)
T 2hk9_A 170 ---------------------Q---------K--------------------FPLEVVNSPEEVIDKVQVIVNTTSVGLK 199 (275)
T ss_dssp ---------------------T---------T--------------------SCEEECSCGGGTGGGCSEEEECSSTTSS
T ss_pred ---------------------H---------H--------------------cCCeeehhHHhhhcCCCEEEEeCCCCCC
Confidence 0 0 0233444666778899999999998753
Q ss_pred HHHHHHH-HHHhhccCCCCEEEEeec
Q 022050 174 KEVFEEI-SRYWKERITVPVIISLAK 198 (303)
Q Consensus 174 ~~vl~~l-~~~l~~~~~~~iivs~~n 198 (303)
.++.+.+ ...+++ +++++++..
T Consensus 200 ~~~~~~i~~~~l~~---g~~viDv~~ 222 (275)
T 2hk9_A 200 DEDPEIFNYDLIKK---DHVVVDIIY 222 (275)
T ss_dssp TTCCCSSCGGGCCT---TSEEEESSS
T ss_pred CCCCCCCCHHHcCC---CCEEEEcCC
Confidence 3211112 234555 678877664
No 126
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=98.36 E-value=2.3e-06 Score=80.09 Aligned_cols=108 Identities=19% Similarity=0.181 Sum_probs=70.1
Q ss_pred CCCCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhh
Q 022050 40 EGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (303)
Q Consensus 40 ~~~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~ 119 (303)
....+||+|||+|.||+++|..|+.. |.+ .++.++|+++++++.... -+.. ..+
T Consensus 6 ~~~~~kV~ViGaG~vG~~~a~~l~~~-~~~---~el~l~D~~~~k~~g~a~-----DL~~-------------~~~---- 59 (326)
T 3vku_A 6 DKDHQKVILVGDGAVGSSYAYAMVLQ-GIA---QEIGIVDIFKDKTKGDAI-----DLED-------------ALP---- 59 (326)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHH-TCC---SEEEEECSCHHHHHHHHH-----HHHT-------------TGG----
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhC-CCC---CeEEEEeCChHHHHHHHh-----hHhh-------------hhh----
Confidence 34568999999999999999999998 732 289999998876543110 0110 000
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch----------------hHHHHHHHHHHH
Q 022050 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST----------------ETKEVFEEISRY 183 (303)
Q Consensus 120 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~----------------~~~~vl~~l~~~ 183 (303)
+ +.+++++++..+++++||+||++.... .+.++.+.+.++
T Consensus 60 ------~------------------~~~~~i~~~~~~a~~~aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~ 115 (326)
T 3vku_A 60 ------F------------------TSPKKIYSAEYSDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDS 115 (326)
T ss_dssp ------G------------------SCCCEEEECCGGGGTTCSEEEECCCCC----------------CHHHHHHHHHTT
T ss_pred ------h------------------cCCcEEEECcHHHhcCCCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhc
Confidence 0 013445555556799999999986321 245566666665
Q ss_pred hhccCCCCEEEEeeccCc
Q 022050 184 WKERITVPVIISLAKGVE 201 (303)
Q Consensus 184 l~~~~~~~iivs~~nGi~ 201 (303)
.+ +++++..+|.+.
T Consensus 116 ~p----~a~ilvvtNPvd 129 (326)
T 3vku_A 116 GF----NGIFLVAANPVD 129 (326)
T ss_dssp TC----CSEEEECSSSHH
T ss_pred CC----ceEEEEccCchH
Confidence 43 578887887644
No 127
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=98.36 E-value=3.6e-06 Score=78.40 Aligned_cols=105 Identities=16% Similarity=0.132 Sum_probs=68.3
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhcC
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (303)
|||+|||+|.+|.+++..++.. +.+ .++.|+|+++++++... .-+.. ..+ +
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~-~~~---~el~L~Di~~~~~~g~~-----~dl~~-------------~~~-~------ 56 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQ-GIA---EEFVIVDVVKDRTKGDA-----LDLED-------------AQA-F------ 56 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCC---SEEEEECSSHHHHHHHH-----HHHHG-------------GGG-G------
T ss_pred CEEEEECCCHHHHHHHHHHHcC-CCC---CEEEEEeCCchHHHHHH-----HHHHH-------------HHH-h------
Confidence 8999999999999999999998 632 38999999887654211 00110 000 0
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch----------------hHHHHHHHHHHHhhcc
Q 022050 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST----------------ETKEVFEEISRYWKER 187 (303)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~----------------~~~~vl~~l~~~l~~~ 187 (303)
+ .+++++.+..+++++||+||++.+.. .++++.+.+..+. +
T Consensus 57 --~-------------------~~~~v~~~~~~a~~~aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~-p- 113 (318)
T 1ez4_A 57 --T-------------------APKKIYSGEYSDCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSG-F- 113 (318)
T ss_dssp --S-------------------CCCEEEECCGGGGTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHTT-C-
T ss_pred --c-------------------CCeEEEECCHHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-C-
Confidence 0 13444445567899999999998543 2444555555553 4
Q ss_pred CCCCEEEEeeccCcc
Q 022050 188 ITVPVIISLAKGVEA 202 (303)
Q Consensus 188 ~~~~iivs~~nGi~~ 202 (303)
++.++..+|.+..
T Consensus 114 --~a~iiv~tNPv~~ 126 (318)
T 1ez4_A 114 --DGIFLVAANPVDI 126 (318)
T ss_dssp --CSEEEECSSSHHH
T ss_pred --CeEEEEeCCcHHH
Confidence 5777777877543
No 128
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=98.35 E-value=3.8e-07 Score=85.06 Aligned_cols=95 Identities=24% Similarity=0.380 Sum_probs=69.4
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
-++|+|||.|.||..+|..+... | ++|..|+|+++..+. ..
T Consensus 139 g~tvGIiG~G~IG~~vA~~l~~~-G-----~~V~~~dr~~~~~~~--------------------------~~------- 179 (315)
T 3pp8_A 139 EFSVGIMGAGVLGAKVAESLQAW-G-----FPLRCWSRSRKSWPG--------------------------VE------- 179 (315)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTT-T-----CCEEEEESSCCCCTT--------------------------CE-------
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC-C-----CEEEEEcCCchhhhh--------------------------hh-------
Confidence 48999999999999999999887 8 899999998753221 00
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH-HHHHHHhhccCCCCEEEEeeccC
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKGV 200 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~-~~~~vl-~~l~~~l~~~~~~~iivs~~nGi 200 (303)
......++++++++||+|++++|.. .++.++ ++....+++ ++++|.+..|=
T Consensus 180 ------------------------~~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~---gailIN~aRG~ 232 (315)
T 3pp8_A 180 ------------------------SYVGREELRAFLNQTRVLINLLPNTAQTVGIINSELLDQLPD---GAYVLNLARGV 232 (315)
T ss_dssp ------------------------EEESHHHHHHHHHTCSEEEECCCCCGGGTTCBSHHHHTTSCT---TEEEEECSCGG
T ss_pred ------------------------hhcccCCHHHHHhhCCEEEEecCCchhhhhhccHHHHhhCCC---CCEEEECCCCh
Confidence 0001146778889999999999954 455555 445555676 78888888775
Q ss_pred ccc
Q 022050 201 EAE 203 (303)
Q Consensus 201 ~~~ 203 (303)
...
T Consensus 233 ~vd 235 (315)
T 3pp8_A 233 HVQ 235 (315)
T ss_dssp GBC
T ss_pred hhh
Confidence 543
No 129
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=98.34 E-value=7.8e-07 Score=84.14 Aligned_cols=98 Identities=26% Similarity=0.324 Sum_probs=70.6
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
.-++|+|||.|.||..+|..+... | .+|..|+|++...+.. ...
T Consensus 163 ~gktvGIIG~G~IG~~vA~~l~~~-G-----~~V~~~dr~~~~~~~~--------------------------~~~---- 206 (351)
T 3jtm_A 163 EGKTIGTVGAGRIGKLLLQRLKPF-G-----CNLLYHDRLQMAPELE--------------------------KET---- 206 (351)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGG-C-----CEEEEECSSCCCHHHH--------------------------HHH----
T ss_pred cCCEEeEEEeCHHHHHHHHHHHHC-C-----CEEEEeCCCccCHHHH--------------------------HhC----
Confidence 348999999999999999999887 8 8999999986433210 000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH-HHHHHHhhccCCCCEEEEeecc
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKG 199 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~-~~~~vl-~~l~~~l~~~~~~~iivs~~nG 199 (303)
.+....++++++++||+|++++|.. .++.++ ++....+++ ++++|.+..|
T Consensus 207 -------------------------g~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~---gailIN~aRG 258 (351)
T 3jtm_A 207 -------------------------GAKFVEDLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKK---GVLIVNNARG 258 (351)
T ss_dssp -------------------------CCEECSCHHHHGGGCSEEEECSCCCTTTTTCBSHHHHHHSCT---TEEEEECSCG
T ss_pred -------------------------CCeEcCCHHHHHhcCCEEEECCCCCHHHHHhhcHHHHhcCCC---CCEEEECcCc
Confidence 2334467888999999999999964 333333 334445676 7888888877
Q ss_pred Cccc
Q 022050 200 VEAE 203 (303)
Q Consensus 200 i~~~ 203 (303)
=...
T Consensus 259 ~~vd 262 (351)
T 3jtm_A 259 AIME 262 (351)
T ss_dssp GGBC
T ss_pred hhhC
Confidence 5443
No 130
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=98.31 E-value=3.4e-06 Score=78.46 Aligned_cols=40 Identities=23% Similarity=0.242 Sum_probs=34.0
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (303)
+|||+|||+|.+|.+++..|+.. |.+ .+|.++|+++++++
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~-~~~---~ei~L~Di~~~~~~ 45 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQ-SIV---DELVIIDLDTEKVR 45 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-CSC---SEEEEECSCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCC---CEEEEEeCChhHhh
Confidence 48999999999999999999988 722 48999999976554
No 131
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.30 E-value=7.7e-07 Score=82.54 Aligned_cols=94 Identities=19% Similarity=0.327 Sum_probs=65.4
Q ss_pred CCCCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhh
Q 022050 40 EGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (303)
Q Consensus 40 ~~~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~ 119 (303)
....++|+|||+|.||..++..|++..|. .+|.+|+|++++.+++.++ +.
T Consensus 132 ~~~~~~igiIG~G~~g~~~a~~l~~~~g~----~~V~v~dr~~~~~~~l~~~----------------------~~---- 181 (312)
T 2i99_A 132 PPSSEVLCILGAGVQAYSHYEIFTEQFSF----KEVRIWNRTKENAEKFADT----------------------VQ---- 181 (312)
T ss_dssp CTTCCEEEEECCSHHHHHHHHHHHHHCCC----SEEEEECSSHHHHHHHHHH----------------------SS----
T ss_pred CCCCcEEEEECCcHHHHHHHHHHHHhCCC----cEEEEEcCCHHHHHHHHHH----------------------hh----
Confidence 34568999999999999999999875231 4899999998765432100 00
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEe
Q 022050 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISL 196 (303)
Q Consensus 120 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~ 196 (303)
..+...++++++++++|+|++++|+. +.++.. +++++ +++|+++
T Consensus 182 --------------------------~~~~~~~~~~e~v~~aDiVi~atp~~--~~v~~~--~~l~~---g~~vi~~ 225 (312)
T 2i99_A 182 --------------------------GEVRVCSSVQEAVAGADVIITVTLAT--EPILFG--EWVKP---GAHINAV 225 (312)
T ss_dssp --------------------------SCCEECSSHHHHHTTCSEEEECCCCS--SCCBCG--GGSCT---TCEEEEC
T ss_pred --------------------------CCeEEeCCHHHHHhcCCEEEEEeCCC--CcccCH--HHcCC---CcEEEeC
Confidence 01445678888899999999999963 333332 45666 6777664
No 132
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=98.30 E-value=6.9e-06 Score=66.76 Aligned_cols=40 Identities=23% Similarity=0.199 Sum_probs=35.9
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
-.++|.|+|+|.+|..+|..|.+. | ++|+++++++++++.
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~-g-----~~v~vid~~~~~~~~ 45 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLAS-D-----IPLVVIETSRTRVDE 45 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESCHHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-C-----CCEEEEECCHHHHHH
Confidence 347899999999999999999998 8 899999999987654
No 133
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=98.29 E-value=5.6e-06 Score=77.09 Aligned_cols=104 Identities=14% Similarity=0.134 Sum_probs=67.9
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCe-eEEEEecC--CchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRP--GRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~-~V~l~~r~--~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~ 119 (303)
.+||+|||+|.||+++|..++.+ | + +|+++|++ ++.++... .-+... .+..
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~-g-----~~~v~l~D~~~~~~~~~g~a-----~dl~~~-------------~~~~-- 61 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQK-E-----LADVVLVDIPQLENPTKGKA-----LDMLEA-------------SPVQ-- 61 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEECCGGGHHHHHHHH-----HHHHHH-------------HHHH--
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-----CCeEEEEeccchHHHHHHhh-----hhHHHh-------------hhhc--
Confidence 47999999999999999999998 8 7 99999999 44332211 001100 0000
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCc----------------hhHHHHHHHHHHH
Q 022050 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS----------------TETKEVFEEISRY 183 (303)
Q Consensus 120 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~----------------~~~~~vl~~l~~~ 183 (303)
+ ....+..++|. +++++||+||++... ..++++.+++.++
T Consensus 62 --~---------------------~~~~i~~t~d~-~a~~~aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~ 117 (315)
T 3tl2_A 62 --G---------------------FDANIIGTSDY-ADTADSDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKH 117 (315)
T ss_dssp --T---------------------CCCCEEEESCG-GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --c---------------------CCCEEEEcCCH-HHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 0 00256667775 468999999999722 1245666666666
Q ss_pred hhccCCCCEEEEeeccC
Q 022050 184 WKERITVPVIISLAKGV 200 (303)
Q Consensus 184 l~~~~~~~iivs~~nGi 200 (303)
.+ +++++..+|..
T Consensus 118 ~p----~a~vlvvsNPv 130 (315)
T 3tl2_A 118 SP----NAIIVVLTNPV 130 (315)
T ss_dssp CT----TCEEEECCSSH
T ss_pred CC----CeEEEECCChH
Confidence 43 57788777753
No 134
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=98.27 E-value=7.6e-07 Score=83.32 Aligned_cols=95 Identities=22% Similarity=0.371 Sum_probs=68.6
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
-++|+|||.|.||..+|..+... | .+|..|+|+++..+. ..
T Consensus 137 gktvGIiGlG~IG~~vA~~l~~~-G-----~~V~~~dr~~~~~~~--------------------------~~------- 177 (324)
T 3evt_A 137 GQQLLIYGTGQIGQSLAAKASAL-G-----MHVIGVNTTGHPADH--------------------------FH------- 177 (324)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESSCCCCTT--------------------------CS-------
T ss_pred CCeEEEECcCHHHHHHHHHHHhC-C-----CEEEEECCCcchhHh--------------------------Hh-------
Confidence 47999999999999999999887 8 899999998753221 00
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH-HHHHHHhhccCCCCEEEEeeccC
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKGV 200 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~-~~~~vl-~~l~~~l~~~~~~~iivs~~nGi 200 (303)
......++++++++||+|++++|.. .++.++ ++....+++ ++++|.+..|=
T Consensus 178 ------------------------~~~~~~~l~ell~~aDvV~l~lPlt~~t~~li~~~~l~~mk~---gailIN~aRG~ 230 (324)
T 3evt_A 178 ------------------------ETVAFTATADALATANFIVNALPLTPTTHHLFSTELFQQTKQ---QPMLINIGRGP 230 (324)
T ss_dssp ------------------------EEEEGGGCHHHHHHCSEEEECCCCCGGGTTCBSHHHHHTCCS---CCEEEECSCGG
T ss_pred ------------------------hccccCCHHHHHhhCCEEEEcCCCchHHHHhcCHHHHhcCCC---CCEEEEcCCCh
Confidence 0112245677889999999999964 344443 344455676 78999888775
Q ss_pred ccc
Q 022050 201 EAE 203 (303)
Q Consensus 201 ~~~ 203 (303)
...
T Consensus 231 ~vd 233 (324)
T 3evt_A 231 AVD 233 (324)
T ss_dssp GBC
T ss_pred hhh
Confidence 443
No 135
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=98.26 E-value=7.2e-07 Score=88.66 Aligned_cols=96 Identities=20% Similarity=0.237 Sum_probs=72.0
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
..++|+|||.|.||.++|..+... | .+|+.|+++... +.. ...
T Consensus 141 ~g~~vgIIG~G~IG~~vA~~l~~~-G-----~~V~~~d~~~~~-~~a--------------------------~~~---- 183 (529)
T 1ygy_A 141 FGKTVGVVGLGRIGQLVAQRIAAF-G-----AYVVAYDPYVSP-ARA--------------------------AQL---- 183 (529)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTT-T-----CEEEEECTTSCH-HHH--------------------------HHH----
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhC-C-----CEEEEECCCCCh-hHH--------------------------Hhc----
Confidence 348999999999999999999987 8 899999998632 110 000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHHHH-HHHHhhccCCCCEEEEeecc
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVFEE-ISRYWKERITVPVIISLAKG 199 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~-~~~~vl~~-l~~~l~~~~~~~iivs~~nG 199 (303)
.+... ++++++++||+|++++|.. .+..++.+ +.+.+++ +++++.+.+|
T Consensus 184 -------------------------g~~~~-~l~e~~~~aDvV~l~~P~~~~t~~~i~~~~~~~~k~---g~ilin~arg 234 (529)
T 1ygy_A 184 -------------------------GIELL-SLDDLLARADFISVHLPKTPETAGLIDKEALAKTKP---GVIIVNAARG 234 (529)
T ss_dssp -------------------------TCEEC-CHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCT---TEEEEECSCT
T ss_pred -------------------------CcEEc-CHHHHHhcCCEEEECCCCchHHHHHhCHHHHhCCCC---CCEEEECCCC
Confidence 12232 6778889999999999998 67777654 5666776 7888888877
Q ss_pred Cccc
Q 022050 200 VEAE 203 (303)
Q Consensus 200 i~~~ 203 (303)
-...
T Consensus 235 ~iv~ 238 (529)
T 1ygy_A 235 GLVD 238 (529)
T ss_dssp TSBC
T ss_pred chhh
Confidence 5543
No 136
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.26 E-value=6.6e-07 Score=73.11 Aligned_cols=91 Identities=15% Similarity=0.213 Sum_probs=63.1
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
.+||+|||+|.||.+++..|+.. | ++|++|+|++++.+++..+ +. .
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~-g-----~~v~v~~r~~~~~~~~a~~----------------------~~-~----- 66 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYP-Q-----YKVTVAGRNIDHVRAFAEK----------------------YE-Y----- 66 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTT-T-----CEEEEEESCHHHHHHHHHH----------------------HT-C-----
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-----CEEEEEcCCHHHHHHHHHH----------------------hC-C-----
Confidence 48999999999999999999887 8 6799999998765432100 00 0
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeec
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~n 198 (303)
......++.++++++|+||.++|.... ++. ..++++ +.+++.+..
T Consensus 67 ------------------------~~~~~~~~~~~~~~~Divi~at~~~~~--~~~--~~~l~~---g~~vid~~~ 111 (144)
T 3oj0_A 67 ------------------------EYVLINDIDSLIKNNDVIITATSSKTP--IVE--ERSLMP---GKLFIDLGN 111 (144)
T ss_dssp ------------------------EEEECSCHHHHHHTCSEEEECSCCSSC--SBC--GGGCCT---TCEEEECCS
T ss_pred ------------------------ceEeecCHHHHhcCCCEEEEeCCCCCc--Eee--HHHcCC---CCEEEEccC
Confidence 123446777888999999999998631 111 134454 667766543
No 137
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=98.26 E-value=9e-07 Score=82.56 Aligned_cols=93 Identities=18% Similarity=0.202 Sum_probs=67.8
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEec-CCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRR-PGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r-~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (303)
.-++|+|||.|.||.++|..+... | ++|..|+| +++.... ...
T Consensus 145 ~g~~vgIIG~G~IG~~~A~~l~~~-G-----~~V~~~d~~~~~~~~~---------------------------~~~--- 188 (320)
T 1gdh_A 145 DNKTLGIYGFGSIGQALAKRAQGF-D-----MDIDYFDTHRASSSDE---------------------------ASY--- 188 (320)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTT-T-----CEEEEECSSCCCHHHH---------------------------HHH---
T ss_pred CCCEEEEECcCHHHHHHHHHHHHC-C-----CEEEEECCCCcChhhh---------------------------hhc---
Confidence 348999999999999999999887 8 89999999 7753110 000
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH-HHHHHHhhccCCCCEEEEeec
Q 022050 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAK 198 (303)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~-~~~~vl-~~l~~~l~~~~~~~iivs~~n 198 (303)
.+....++++++++||+|++++|.. .++.++ +...+.+++ ++++|.+..
T Consensus 189 --------------------------g~~~~~~l~ell~~aDvVil~~p~~~~t~~~i~~~~l~~mk~---gailIn~ar 239 (320)
T 1gdh_A 189 --------------------------QATFHDSLDSLLSVSQFFSLNAPSTPETRYFFNKATIKSLPQ---GAIVVNTAR 239 (320)
T ss_dssp --------------------------TCEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTSCT---TEEEEECSC
T ss_pred --------------------------CcEEcCCHHHHHhhCCEEEEeccCchHHHhhcCHHHHhhCCC---CcEEEECCC
Confidence 1233346778888999999999975 345444 334455676 788888877
Q ss_pred c
Q 022050 199 G 199 (303)
Q Consensus 199 G 199 (303)
|
T Consensus 240 g 240 (320)
T 1gdh_A 240 G 240 (320)
T ss_dssp G
T ss_pred C
Confidence 6
No 138
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=98.26 E-value=1.5e-06 Score=81.91 Aligned_cols=95 Identities=19% Similarity=0.178 Sum_probs=69.1
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
-++|+|||.|.||..+|..+..- | .+|..|+|++...+. ..
T Consensus 173 gktvGIIGlG~IG~~vA~~l~~~-G-----~~V~~~dr~~~~~~~--------------------------~~------- 213 (345)
T 4g2n_A 173 GRRLGIFGMGRIGRAIATRARGF-G-----LAIHYHNRTRLSHAL--------------------------EE------- 213 (345)
T ss_dssp TCEEEEESCSHHHHHHHHHHHTT-T-----CEEEEECSSCCCHHH--------------------------HT-------
T ss_pred CCEEEEEEeChhHHHHHHHHHHC-C-----CEEEEECCCCcchhh--------------------------hc-------
Confidence 47999999999999999999877 8 899999998643211 00
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH-HHHHHHhhccCCCCEEEEeeccC
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKGV 200 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~-~~~~vl-~~l~~~l~~~~~~~iivs~~nGi 200 (303)
......++++++++||+|++++|.. .++.++ ++....+++ ++++|.+..|=
T Consensus 214 ------------------------g~~~~~~l~ell~~sDvV~l~~Plt~~T~~li~~~~l~~mk~---gailIN~aRG~ 266 (345)
T 4g2n_A 214 ------------------------GAIYHDTLDSLLGASDIFLIAAPGRPELKGFLDHDRIAKIPE---GAVVINISRGD 266 (345)
T ss_dssp ------------------------TCEECSSHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHSCT---TEEEEECSCGG
T ss_pred ------------------------CCeEeCCHHHHHhhCCEEEEecCCCHHHHHHhCHHHHhhCCC---CcEEEECCCCc
Confidence 1233457888899999999999963 344433 334455676 78888888775
Q ss_pred ccc
Q 022050 201 EAE 203 (303)
Q Consensus 201 ~~~ 203 (303)
..+
T Consensus 267 ~vd 269 (345)
T 4g2n_A 267 LIN 269 (345)
T ss_dssp GBC
T ss_pred hhC
Confidence 544
No 139
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.25 E-value=6.3e-06 Score=66.56 Aligned_cols=39 Identities=13% Similarity=0.173 Sum_probs=35.3
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
+++|.|+|+|.+|..+|..|.+. | ++|++++++++.++.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~-g-----~~V~~id~~~~~~~~ 44 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAA-G-----KKVLAVDKSKEKIEL 44 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-C-----CeEEEEECCHHHHHH
Confidence 57899999999999999999998 8 899999999876654
No 140
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=98.24 E-value=3.4e-06 Score=79.10 Aligned_cols=108 Identities=10% Similarity=0.058 Sum_probs=70.8
Q ss_pred CCCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhh
Q 022050 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (303)
Q Consensus 41 ~~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (303)
...+||+|||+|.||.++|..++.+ |.. .++.++|+++++++....+ ++ +..
T Consensus 17 ~~~~kV~ViGaG~vG~~~a~~l~~~-~~~---~el~L~Di~~~~~~g~a~D-----L~-----------------~~~-- 68 (331)
T 4aj2_A 17 VPQNKITVVGVGAVGMACAISILMK-DLA---DELALVDVIEDKLKGEMMD-----LQ-----------------HGS-- 68 (331)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHT-TCC---SEEEEECSCHHHHHHHHHH-----HH-----------------HTG--
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-CCC---ceEEEEeCChHHHHHHHHh-----hh-----------------hhh--
Confidence 4568999999999999999999998 721 3899999987765431100 11 000
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEec--Cc--------------hhHHHHHHHHHHHh
Q 022050 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGL--PS--------------TETKEVFEEISRYW 184 (303)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaV--p~--------------~~~~~vl~~l~~~l 184 (303)
.+. ....+..++|.+ ++++||+||++. |. ..++++.+.+.++.
T Consensus 69 ----~~~----------------~~~~i~~~~d~~-~~~~aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~ 127 (331)
T 4aj2_A 69 ----LFL----------------KTPKIVSSKDYS-VTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYS 127 (331)
T ss_dssp ----GGC----------------SCCEEEECSSGG-GGTTEEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC
T ss_pred ----hcc----------------CCCeEEEcCCHH-HhCCCCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHC
Confidence 000 001345567776 689999999986 22 13566667777764
Q ss_pred hccCCCCEEEEeeccCc
Q 022050 185 KERITVPVIISLAKGVE 201 (303)
Q Consensus 185 ~~~~~~~iivs~~nGi~ 201 (303)
+ +++++..+|.+.
T Consensus 128 -p---~a~vlvvtNPvd 140 (331)
T 4aj2_A 128 -P---QCKLLIVSNPVD 140 (331)
T ss_dssp -T---TCEEEECSSSHH
T ss_pred -C---CeEEEEecChHH
Confidence 3 578888887654
No 141
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=98.24 E-value=1e-06 Score=81.86 Aligned_cols=93 Identities=15% Similarity=0.182 Sum_probs=66.9
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
.-++|+|||.|.||..+|..+... | ++|..|+|+++.... ...
T Consensus 141 ~g~~vgIIG~G~IG~~~A~~l~~~-G-----~~V~~~d~~~~~~~~---------------------------~~~---- 183 (313)
T 2ekl_A 141 AGKTIGIVGFGRIGTKVGIIANAM-G-----MKVLAYDILDIREKA---------------------------EKI---- 183 (313)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHT-T-----CEEEEECSSCCHHHH---------------------------HHT----
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHC-C-----CEEEEECCCcchhHH---------------------------Hhc----
Confidence 348999999999999999999887 8 899999998763210 000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh-HHHHH-HHHHHHhhccCCCCEEEEeecc
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE-TKEVF-EEISRYWKERITVPVIISLAKG 199 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~-~~~vl-~~l~~~l~~~~~~~iivs~~nG 199 (303)
.... .++++.++++|+|++++|... ++.++ ++....+++ ++++|.+..|
T Consensus 184 -------------------------g~~~-~~l~ell~~aDvVvl~~P~~~~t~~li~~~~l~~mk~---ga~lIn~arg 234 (313)
T 2ekl_A 184 -------------------------NAKA-VSLEELLKNSDVISLHVTVSKDAKPIIDYPQFELMKD---NVIIVNTSRA 234 (313)
T ss_dssp -------------------------TCEE-CCHHHHHHHCSEEEECCCCCTTSCCSBCHHHHHHSCT---TEEEEESSCG
T ss_pred -------------------------Ccee-cCHHHHHhhCCEEEEeccCChHHHHhhCHHHHhcCCC---CCEEEECCCC
Confidence 1222 367788889999999999753 43333 334445676 7888887776
Q ss_pred C
Q 022050 200 V 200 (303)
Q Consensus 200 i 200 (303)
=
T Consensus 235 ~ 235 (313)
T 2ekl_A 235 V 235 (313)
T ss_dssp G
T ss_pred c
Confidence 3
No 142
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=98.24 E-value=1.4e-06 Score=83.56 Aligned_cols=97 Identities=20% Similarity=0.184 Sum_probs=69.5
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
.-++|+|||.|.||..+|..+... | .+|..|+|++...+. ....
T Consensus 190 ~gktvGIIGlG~IG~~vA~~l~a~-G-----~~V~~~d~~~~~~~~--------------------------~~~~---- 233 (393)
T 2nac_A 190 EAMHVGTVAAGRIGLAVLRRLAPF-D-----VHLHYTDRHRLPESV--------------------------EKEL---- 233 (393)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGG-T-----CEEEEECSSCCCHHH--------------------------HHHH----
T ss_pred CCCEEEEEeECHHHHHHHHHHHhC-C-----CEEEEEcCCccchhh--------------------------Hhhc----
Confidence 448999999999999999999877 8 899999998643221 0000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH-HHHHHHhhccCCCCEEEEeecc
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKG 199 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~-~~~~vl-~~l~~~l~~~~~~~iivs~~nG 199 (303)
.+....++++.+++||+|++++|.. .++.++ ++....+++ ++++|.+..|
T Consensus 234 -------------------------G~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~---gailIN~aRG 285 (393)
T 2nac_A 234 -------------------------NLTWHATREDMYPVCDVVTLNCPLHPETEHMINDETLKLFKR---GAYIVNTARG 285 (393)
T ss_dssp -------------------------TCEECSSHHHHGGGCSEEEECSCCCTTTTTCBSHHHHTTSCT---TEEEEECSCG
T ss_pred -------------------------CceecCCHHHHHhcCCEEEEecCCchHHHHHhhHHHHhhCCC---CCEEEECCCc
Confidence 2333356788889999999999964 344455 344455676 7888888877
Q ss_pred Ccc
Q 022050 200 VEA 202 (303)
Q Consensus 200 i~~ 202 (303)
=..
T Consensus 286 ~~v 288 (393)
T 2nac_A 286 KLC 288 (393)
T ss_dssp GGB
T ss_pred hHh
Confidence 433
No 143
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=98.23 E-value=1.8e-06 Score=75.33 Aligned_cols=103 Identities=14% Similarity=0.134 Sum_probs=68.2
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhcC
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (303)
|||.|+|+|.+|..+|..|.+. | ++|+++++++++++.+..+ . ....+ .++
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~-g-----~~v~vid~~~~~~~~l~~~-----~---------------~~~~i---~gd 51 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSR-K-----YGVVIINKDRELCEEFAKK-----L---------------KATII---HGD 51 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT-T-----CCEEEEESCHHHHHHHHHH-----S---------------SSEEE---ESC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-C-----CeEEEEECCHHHHHHHHHH-----c---------------CCeEE---EcC
Confidence 7999999999999999999998 8 8999999999876542110 0 00000 000
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHH-hcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeeccCcc
Q 022050 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEA-VWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (303)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a-~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nGi~~ 202 (303)
..-...+.++ +++||+||++++.......+..+.+.+.+ ...+++.++.-..
T Consensus 52 ------------------------~~~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~---~~~iia~~~~~~~ 104 (218)
T 3l4b_C 52 ------------------------GSHKEILRDAEVSKNDVVVILTPRDEVNLFIAQLVMKDFG---VKRVVSLVNDPGN 104 (218)
T ss_dssp ------------------------TTSHHHHHHHTCCTTCEEEECCSCHHHHHHHHHHHHHTSC---CCEEEECCCSGGG
T ss_pred ------------------------CCCHHHHHhcCcccCCEEEEecCCcHHHHHHHHHHHHHcC---CCeEEEEEeCcch
Confidence 0000113333 67899999999999877777666665444 4566766665443
No 144
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=98.22 E-value=1.4e-06 Score=82.81 Aligned_cols=97 Identities=23% Similarity=0.248 Sum_probs=69.6
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCee-EEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~-V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (303)
.-++|+|||.|.||..+|..+... | .+ |..|+|++...+.. ..
T Consensus 163 ~g~tvgIIG~G~IG~~vA~~l~~~-G-----~~~V~~~d~~~~~~~~~--------------------------~~---- 206 (364)
T 2j6i_A 163 EGKTIATIGAGRIGYRVLERLVPF-N-----PKELLYYDYQALPKDAE--------------------------EK---- 206 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGG-C-----CSEEEEECSSCCCHHHH--------------------------HH----
T ss_pred CCCEEEEECcCHHHHHHHHHHHhC-C-----CcEEEEECCCccchhHH--------------------------Hh----
Confidence 448999999999999999999877 8 86 99999987543210 00
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH-HHHHHHhhccCCCCEEEEeec
Q 022050 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAK 198 (303)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~-~~~~vl-~~l~~~l~~~~~~~iivs~~n 198 (303)
..+....++++++++||+|++++|.. .++.++ ++....+++ ++++|.+..
T Consensus 207 -------------------------~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~---ga~lIn~ar 258 (364)
T 2j6i_A 207 -------------------------VGARRVENIEELVAQADIVTVNAPLHAGTKGLINKELLSKFKK---GAWLVNTAR 258 (364)
T ss_dssp -------------------------TTEEECSSHHHHHHTCSEEEECCCCSTTTTTCBCHHHHTTSCT---TEEEEECSC
T ss_pred -------------------------cCcEecCCHHHHHhcCCEEEECCCCChHHHHHhCHHHHhhCCC---CCEEEECCC
Confidence 02333457888889999999999986 344444 334455666 788888887
Q ss_pred cCcc
Q 022050 199 GVEA 202 (303)
Q Consensus 199 Gi~~ 202 (303)
|=..
T Consensus 259 G~~v 262 (364)
T 2j6i_A 259 GAIC 262 (364)
T ss_dssp GGGB
T ss_pred Cchh
Confidence 7433
No 145
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=98.22 E-value=1.2e-06 Score=82.65 Aligned_cols=98 Identities=12% Similarity=0.111 Sum_probs=69.9
Q ss_pred CCCCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhh
Q 022050 40 EGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (303)
Q Consensus 40 ~~~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~ 119 (303)
+-.-++|+|||.|.||..+|..+... | .+|..|+++++.... ...
T Consensus 165 ~l~g~tvGIIG~G~IG~~vA~~l~~~-G-----~~V~~~d~~~~~~~~---------------------------~~~-- 209 (347)
T 1mx3_A 165 RIRGETLGIIGLGRVGQAVALRAKAF-G-----FNVLFYDPYLSDGVE---------------------------RAL-- 209 (347)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTT-T-----CEEEEECTTSCTTHH---------------------------HHH--
T ss_pred CCCCCEEEEEeECHHHHHHHHHHHHC-C-----CEEEEECCCcchhhH---------------------------hhc--
Confidence 33458999999999999999999887 8 899999987642100 000
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH-HHHHHHhhccCCCCEEEEee
Q 022050 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLA 197 (303)
Q Consensus 120 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~-~~~~vl-~~l~~~l~~~~~~~iivs~~ 197 (303)
......++++++++||+|++++|.. .++.++ ++....+++ ++++|.+.
T Consensus 210 ---------------------------g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~---gailIN~a 259 (347)
T 1mx3_A 210 ---------------------------GLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQ---GAFLVNTA 259 (347)
T ss_dssp ---------------------------TCEECSSHHHHHHHCSEEEECCCCCTTCTTSBSHHHHTTSCT---TEEEEECS
T ss_pred ---------------------------CCeecCCHHHHHhcCCEEEEcCCCCHHHHHHhHHHHHhcCCC---CCEEEECC
Confidence 1233346778888999999999985 445444 344445676 78888888
Q ss_pred ccCcc
Q 022050 198 KGVEA 202 (303)
Q Consensus 198 nGi~~ 202 (303)
.|=..
T Consensus 260 rg~~v 264 (347)
T 1mx3_A 260 RGGLV 264 (347)
T ss_dssp CTTSB
T ss_pred CChHH
Confidence 77444
No 146
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=98.22 E-value=1.9e-06 Score=79.82 Aligned_cols=93 Identities=24% Similarity=0.312 Sum_probs=67.1
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
.-++|+|||.|.||..+|..+... | .+|..|+|+++. +.. ...
T Consensus 141 ~g~~vgIiG~G~IG~~~A~~l~~~-G-----~~V~~~d~~~~~-~~~--------------------------~~~---- 183 (307)
T 1wwk_A 141 EGKTIGIIGFGRIGYQVAKIANAL-G-----MNILLYDPYPNE-ERA--------------------------KEV---- 183 (307)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCH-HHH--------------------------HHT----
T ss_pred CCceEEEEccCHHHHHHHHHHHHC-C-----CEEEEECCCCCh-hhH--------------------------hhc----
Confidence 347999999999999999999887 8 899999998764 110 000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh-HHHHH-HHHHHHhhccCCCCEEEEeecc
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE-TKEVF-EEISRYWKERITVPVIISLAKG 199 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~-~~~vl-~~l~~~l~~~~~~~iivs~~nG 199 (303)
.+.. .++++++++||+|++++|... ++.++ ++....+++ ++++|.+..|
T Consensus 184 -------------------------g~~~-~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~---ga~lin~arg 234 (307)
T 1wwk_A 184 -------------------------NGKF-VDLETLLKESDVVTIHVPLVESTYHLINEERLKLMKK---TAILINTSRG 234 (307)
T ss_dssp -------------------------TCEE-CCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHHHSCT---TCEEEECSCG
T ss_pred -------------------------Cccc-cCHHHHHhhCCEEEEecCCChHHhhhcCHHHHhcCCC---CeEEEECCCC
Confidence 1222 267788889999999999753 44444 334455676 7888888776
Q ss_pred C
Q 022050 200 V 200 (303)
Q Consensus 200 i 200 (303)
=
T Consensus 235 ~ 235 (307)
T 1wwk_A 235 P 235 (307)
T ss_dssp G
T ss_pred c
Confidence 3
No 147
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.21 E-value=4.4e-06 Score=68.54 Aligned_cols=75 Identities=20% Similarity=0.237 Sum_probs=55.6
Q ss_pred CCceEEEECC----ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhh
Q 022050 42 DPLRIVGVGA----GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYV 117 (303)
Q Consensus 42 ~~~kI~VIGa----G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~ 117 (303)
.+.+|+|||+ |.||..++..|.+. | ++|+.++++.+.+ .
T Consensus 13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~-G-----~~V~~vnp~~~~i-----------------------------~-- 55 (138)
T 1y81_A 13 EFRKIALVGASKNPAKYGNIILKDLLSK-G-----FEVLPVNPNYDEI-----------------------------E-- 55 (138)
T ss_dssp -CCEEEEETCCSCTTSHHHHHHHHHHHT-T-----CEEEEECTTCSEE-----------------------------T--
T ss_pred CCCeEEEEeecCCCCCHHHHHHHHHHHC-C-----CEEEEeCCCCCeE-----------------------------C--
Confidence 4588999999 99999999999988 8 7755554443211 0
Q ss_pred hhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHH
Q 022050 118 EARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISR 182 (303)
Q Consensus 118 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~ 182 (303)
..++..+++++.+.+|++++++|+....++++++..
T Consensus 56 -----------------------------G~~~~~s~~el~~~vDlvii~vp~~~v~~v~~~~~~ 91 (138)
T 1y81_A 56 -----------------------------GLKCYRSVRELPKDVDVIVFVVPPKVGLQVAKEAVE 91 (138)
T ss_dssp -----------------------------TEECBSSGGGSCTTCCEEEECSCHHHHHHHHHHHHH
T ss_pred -----------------------------CeeecCCHHHhCCCCCEEEEEeCHHHHHHHHHHHHH
Confidence 233344566666679999999999999999988665
No 148
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=98.21 E-value=7.7e-06 Score=76.50 Aligned_cols=83 Identities=19% Similarity=0.134 Sum_probs=60.1
Q ss_pred CCCCCceEEEECCChHHHHHHHHHHHh-cCCCCCCeeEE-EEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchh
Q 022050 39 AEGDPLRIVGVGAGAWGSVFTAMLQDS-YGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKY 116 (303)
Q Consensus 39 ~~~~~~kI~VIGaG~mG~aiA~~La~~-~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~ 116 (303)
....++||+|||+|.||..++..+.+. .+ .+++ ++++++++++++. ..
T Consensus 9 ~~~~~~rvgiiG~G~~g~~~~~~l~~~~~~-----~~lvav~d~~~~~~~~~~-------------------------~~ 58 (354)
T 3q2i_A 9 ITDRKIRFALVGCGRIANNHFGALEKHADR-----AELIDVCDIDPAALKAAV-------------------------ER 58 (354)
T ss_dssp CCSSCEEEEEECCSTTHHHHHHHHHHTTTT-----EEEEEEECSSHHHHHHHH-------------------------HH
T ss_pred CCCCcceEEEEcCcHHHHHHHHHHHhCCCC-----eEEEEEEcCCHHHHHHHH-------------------------HH
Confidence 334568999999999999999988875 13 6654 8899887654311 00
Q ss_pred hhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHH
Q 022050 117 VEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEI 180 (303)
Q Consensus 117 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~--~aDlVIiaVp~~~~~~vl~~l 180 (303)
.++...+|+++.+. ++|+|++|+|+....+++.+.
T Consensus 59 -----------------------------~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~a 95 (354)
T 3q2i_A 59 -----------------------------TGARGHASLTDMLAQTDADIVILTTPSGLHPTQSIEC 95 (354)
T ss_dssp -----------------------------HCCEEESCHHHHHHHCCCSEEEECSCGGGHHHHHHHH
T ss_pred -----------------------------cCCceeCCHHHHhcCCCCCEEEECCCcHHHHHHHHHH
Confidence 03456678888775 799999999998776666554
No 149
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.21 E-value=3.2e-06 Score=65.37 Aligned_cols=39 Identities=23% Similarity=0.296 Sum_probs=34.1
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (303)
+|||+|+|+|.||..++..|.+. |. ++|++++|++++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~-g~----~~v~~~~r~~~~~~ 43 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTS-SN----YSVTVADHDLAALA 43 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHC-SS----EEEEEEESCHHHHH
T ss_pred cCeEEEECCCHHHHHHHHHHHhC-CC----ceEEEEeCCHHHHH
Confidence 47999999999999999999988 72 68999999987654
No 150
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=98.17 E-value=1.1e-06 Score=81.37 Aligned_cols=89 Identities=18% Similarity=0.289 Sum_probs=66.5
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
.-++|+|||.|.||..+|..+... | ++|..|+|+++ +. +.
T Consensus 123 ~g~~vgIIG~G~IG~~~A~~l~~~-G-----~~V~~~dr~~~--~~----------------------------~~---- 162 (303)
T 1qp8_A 123 QGEKVAVLGLGEIGTRVGKILAAL-G-----AQVRGFSRTPK--EG----------------------------PW---- 162 (303)
T ss_dssp TTCEEEEESCSTHHHHHHHHHHHT-T-----CEEEEECSSCC--CS----------------------------SS----
T ss_pred CCCEEEEEccCHHHHHHHHHHHHC-C-----CEEEEECCCcc--cc----------------------------Cc----
Confidence 348999999999999999999887 8 89999999864 10 00
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHHH-HHHHHhhccCCCCEEEEeecc
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVFE-EISRYWKERITVPVIISLAKG 199 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~-~~~~vl~-~l~~~l~~~~~~~iivs~~nG 199 (303)
. ...++++++++||+|++++|.. .++.++. +....+++ ++++|.+..|
T Consensus 163 --------------------------~-~~~~l~ell~~aDvV~l~~P~~~~t~~~i~~~~l~~mk~---gailin~srg 212 (303)
T 1qp8_A 163 --------------------------R-FTNSLEEALREARAAVCALPLNKHTRGLVKYQHLALMAE---DAVFVNVGRA 212 (303)
T ss_dssp --------------------------C-CBSCSHHHHTTCSEEEECCCCSTTTTTCBCHHHHTTSCT---TCEEEECSCG
T ss_pred --------------------------c-cCCCHHHHHhhCCEEEEeCcCchHHHHHhCHHHHhhCCC---CCEEEECCCC
Confidence 0 1134667889999999999986 4555553 45556776 7888887776
Q ss_pred C
Q 022050 200 V 200 (303)
Q Consensus 200 i 200 (303)
=
T Consensus 213 ~ 213 (303)
T 1qp8_A 213 E 213 (303)
T ss_dssp G
T ss_pred c
Confidence 3
No 151
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=98.17 E-value=2.9e-06 Score=80.01 Aligned_cols=44 Identities=20% Similarity=0.330 Sum_probs=33.7
Q ss_pred ccCCCCCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 37 GKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 37 ~~~~~~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
...+.+.|||+|+|||.+|..+|..|++. ++|++++++.+++++
T Consensus 10 ~~~~g~~mkilvlGaG~vG~~~~~~L~~~-------~~v~~~~~~~~~~~~ 53 (365)
T 3abi_A 10 HHIEGRHMKVLILGAGNIGRAIAWDLKDE-------FDVYIGDVNNENLEK 53 (365)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHTTT-------SEEEEEESCHHHHHH
T ss_pred ccccCCccEEEEECCCHHHHHHHHHHhcC-------CCeEEEEcCHHHHHH
Confidence 34456779999999999999999999765 789999999876654
No 152
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=98.16 E-value=8.8e-06 Score=75.48 Aligned_cols=39 Identities=18% Similarity=0.135 Sum_probs=33.4
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhh
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (303)
|||+|||+|.+|.+++..++.. +.+ .++.++|+++++++
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~-~~~---~el~L~Di~~~k~~ 39 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALL-GVA---REVVLVDLDRKLAQ 39 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCC---SEEEEECSSHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCC---CEEEEEeCChhHHH
Confidence 7999999999999999999987 632 48999999987654
No 153
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=98.14 E-value=2.1e-06 Score=81.17 Aligned_cols=96 Identities=15% Similarity=0.189 Sum_probs=69.1
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
-++|+|||.|.||..+|..+... | .+|..|+|+... +. ...
T Consensus 160 g~tvGIIGlG~IG~~vA~~l~~~-G-----~~V~~~d~~~~~-~~--------------------------~~~------ 200 (352)
T 3gg9_A 160 GQTLGIFGYGKIGQLVAGYGRAF-G-----MNVLVWGRENSK-ER--------------------------ARA------ 200 (352)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSHHHH-HH--------------------------HHH------
T ss_pred CCEEEEEeECHHHHHHHHHHHhC-C-----CEEEEECCCCCH-HH--------------------------HHh------
Confidence 47999999999999999999887 8 899999987521 10 000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH-HHHHHHhhccCCCCEEEEeeccC
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKGV 200 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~-~~~~vl-~~l~~~l~~~~~~~iivs~~nGi 200 (303)
..++...++++++++||+|++++|.. .++.++ ++....+++ ++++|.+..|=
T Consensus 201 -----------------------~g~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~---gailIN~aRg~ 254 (352)
T 3gg9_A 201 -----------------------DGFAVAESKDALFEQSDVLSVHLRLNDETRSIITVADLTRMKP---TALFVNTSRAE 254 (352)
T ss_dssp -----------------------TTCEECSSHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCT---TCEEEECSCGG
T ss_pred -----------------------cCceEeCCHHHHHhhCCEEEEeccCcHHHHHhhCHHHHhhCCC---CcEEEECCCch
Confidence 02344567888899999999999964 344333 334455676 78999888775
Q ss_pred ccc
Q 022050 201 EAE 203 (303)
Q Consensus 201 ~~~ 203 (303)
...
T Consensus 255 ~vd 257 (352)
T 3gg9_A 255 LVE 257 (352)
T ss_dssp GBC
T ss_pred hhc
Confidence 444
No 154
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=98.13 E-value=2.4e-05 Score=73.65 Aligned_cols=106 Identities=15% Similarity=0.182 Sum_probs=69.8
Q ss_pred CCceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhh
Q 022050 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (303)
Q Consensus 42 ~~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (303)
..+||+|||+ |.+|+++|..++.. |. . .+|.++|+++++++.... -++. .+ + +
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~~-g~-~--~evvLiDi~~~k~~g~a~-----DL~~----------~~-~-~----- 60 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAMM-RL-T--PNLCLYDPFAVGLEGVAE-----EIRH----------CG-F-E----- 60 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHHT-TC-C--SCEEEECSCHHHHHHHHH-----HHHH----------HC-C-T-----
T ss_pred CCCEEEEECCCChHHHHHHHHHHhc-CC-C--CEEEEEeCCchhHHHHHH-----hhhh----------Cc-C-C-----
Confidence 3589999998 99999999999988 72 1 479999998875542110 0110 00 0 0
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEec--Cc--------------hhHHHHHHHHHHHh
Q 022050 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGL--PS--------------TETKEVFEEISRYW 184 (303)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaV--p~--------------~~~~~vl~~l~~~l 184 (303)
..++.+++|..+++++||+||++. |. ..++++.+++.++.
T Consensus 61 ------------------------~~~i~~t~d~~~al~dADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~ 116 (343)
T 3fi9_A 61 ------------------------GLNLTFTSDIKEALTDAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYC 116 (343)
T ss_dssp ------------------------TCCCEEESCHHHHHTTEEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ------------------------CCceEEcCCHHHHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 025778889888899999999986 22 12455666666665
Q ss_pred hccCCCCE-EEEeeccCc
Q 022050 185 KERITVPV-IISLAKGVE 201 (303)
Q Consensus 185 ~~~~~~~i-ivs~~nGi~ 201 (303)
+ +++ ++..+|.+.
T Consensus 117 p----~a~~vlvvsNPvd 130 (343)
T 3fi9_A 117 P----DCKHVIIIFNPAD 130 (343)
T ss_dssp T----TCCEEEECSSSHH
T ss_pred c----CcEEEEEecCchH
Confidence 4 454 667777643
No 155
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=98.12 E-value=1.8e-05 Score=72.99 Aligned_cols=107 Identities=11% Similarity=0.023 Sum_probs=68.7
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhcC
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (303)
|||+|||||.+|+++|..|+.+ +.. .++.|+|.+++.++... .-+.. ....+.
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~-~~~---~el~L~Di~~~~~~G~a-----~DL~h----------~~~~~~-------- 53 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLN-LDV---DEIALVDIAEDLAVGEA-----MDLAH----------AAAGID-------- 53 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-SCC---SEEEEECSSHHHHHHHH-----HHHHH----------HHGGGT--------
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CCC---CEEEEEeCCCCcchhhh-----hhhhc----------ccccCC--------
Confidence 8999999999999999999988 732 47999999876543210 00110 000000
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEec--Cch--------------hHHHHHHHHHHHhhcc
Q 022050 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGL--PST--------------ETKEVFEEISRYWKER 187 (303)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaV--p~~--------------~~~~vl~~l~~~l~~~ 187 (303)
. ...+..++|.+ ++++||+||++- |.+ .++++.+++.++.+
T Consensus 54 --~------------------~~~i~~~~d~~-~~~~aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p-- 110 (294)
T 2x0j_A 54 --K------------------YPKIVGGADYS-LLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAP-- 110 (294)
T ss_dssp --C------------------CCEEEEESCGG-GGTTCSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTST--
T ss_pred --C------------------CCeEecCCCHH-HhCCCCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCC--
Confidence 0 01355566765 689999999976 221 34556666666544
Q ss_pred CCCCEEEEeeccCcc
Q 022050 188 ITVPVIISLAKGVEA 202 (303)
Q Consensus 188 ~~~~iivs~~nGi~~ 202 (303)
+++++..+|.+..
T Consensus 111 --~aivlvvsNPvd~ 123 (294)
T 2x0j_A 111 --ESKILVVTNPMDV 123 (294)
T ss_dssp --TCEEEECSSSHHH
T ss_pred --ceEEEEecCcchh
Confidence 5788888887654
No 156
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.12 E-value=1.5e-05 Score=70.53 Aligned_cols=81 Identities=22% Similarity=0.339 Sum_probs=59.4
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeE-EEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
|||+|||+|.||..++..+... | +++ .+|++++. .+
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~-g-----~~lv~v~d~~~~-~~------------------------------------ 37 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERN-G-----FEIAAILDVRGE-HE------------------------------------ 37 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEECSSCC-CT------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHhcC-C-----CEEEEEEecCcc-hh------------------------------------
Confidence 6999999999999999999876 7 776 68888742 11
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHh-cCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeecc
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAV-WDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~-~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nG 199 (303)
. ..+|+++.+ .++|+|++++|+....+++.. .+.. +..+++...+
T Consensus 38 ------------------------~--~~~~~~~l~~~~~DvVv~~~~~~~~~~~~~~---~l~~---G~~vv~~~~~ 83 (236)
T 2dc1_A 38 ------------------------K--MVRGIDEFLQREMDVAVEAASQQAVKDYAEK---ILKA---GIDLIVLSTG 83 (236)
T ss_dssp ------------------------T--EESSHHHHTTSCCSEEEECSCHHHHHHHHHH---HHHT---TCEEEESCGG
T ss_pred ------------------------h--hcCCHHHHhcCCCCEEEECCCHHHHHHHHHH---HHHC---CCcEEEECcc
Confidence 1 234566766 689999999999876666643 3444 6677765543
No 157
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=98.12 E-value=3.1e-06 Score=81.45 Aligned_cols=93 Identities=16% Similarity=0.244 Sum_probs=68.5
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
.-++|+|||.|.||..+|..+... | .+|..|+|++... ..
T Consensus 144 ~gktlGiIGlG~IG~~vA~~l~~~-G-----~~V~~~d~~~~~~----------------------------~~------ 183 (404)
T 1sc6_A 144 RGKKLGIIGYGHIGTQLGILAESL-G-----MYVYFYDIENKLP----------------------------LG------ 183 (404)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCCC----------------------------CT------
T ss_pred CCCEEEEEeECHHHHHHHHHHHHC-C-----CEEEEEcCCchhc----------------------------cC------
Confidence 348999999999999999999887 8 8999999975310 00
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH-HHHHHHhhccCCCCEEEEeecc
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKG 199 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~-~~~~vl-~~l~~~l~~~~~~~iivs~~nG 199 (303)
......+++++++.||+|++++|.. .++.++ ++....+++ ++++|.+..|
T Consensus 184 -------------------------~~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~---ga~lIN~aRg 235 (404)
T 1sc6_A 184 -------------------------NATQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKP---GSLLINASRG 235 (404)
T ss_dssp -------------------------TCEECSCHHHHHHHCSEEEECCCSSTTTTTCBCHHHHHHSCT---TEEEEECSCS
T ss_pred -------------------------CceecCCHHHHHhcCCEEEEccCCChHHHHHhhHHHHhhcCC---CeEEEECCCC
Confidence 1233456888889999999999986 344444 334445676 7888888777
Q ss_pred Ccc
Q 022050 200 VEA 202 (303)
Q Consensus 200 i~~ 202 (303)
=..
T Consensus 236 ~~v 238 (404)
T 1sc6_A 236 TVV 238 (404)
T ss_dssp SSB
T ss_pred hHH
Confidence 444
No 158
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=98.11 E-value=1.7e-06 Score=80.32 Aligned_cols=89 Identities=24% Similarity=0.284 Sum_probs=66.4
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
..++|+|||.|.||..+|..+... | .+|..|+|+++..+ .
T Consensus 143 ~g~~vgIIG~G~IG~~~A~~l~~~-G-----~~V~~~d~~~~~~~------------------------------~---- 182 (311)
T 2cuk_A 143 QGLTLGLVGMGRIGQAVAKRALAF-G-----MRVVYHARTPKPLP------------------------------Y---- 182 (311)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCSSS------------------------------S----
T ss_pred CCCEEEEEEECHHHHHHHHHHHHC-C-----CEEEEECCCCcccc------------------------------c----
Confidence 347999999999999999999887 8 89999999864210 0
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHHH-HHHHHhhccCCCCEEEEeecc
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVFE-EISRYWKERITVPVIISLAKG 199 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~-~~~~vl~-~l~~~l~~~~~~~iivs~~nG 199 (303)
. ..++++.+++||+|++++|.. ..+.++. +....+++ ++++|.+..|
T Consensus 183 -------------------------~---~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~---ga~lin~srg 231 (311)
T 2cuk_A 183 -------------------------P---FLSLEELLKEADVVSLHTPLTPETHRLLNRERLFAMKR---GAILLNTARG 231 (311)
T ss_dssp -------------------------C---BCCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHTTSCT---TCEEEECSCG
T ss_pred -------------------------c---cCCHHHHHhhCCEEEEeCCCChHHHhhcCHHHHhhCCC---CcEEEECCCC
Confidence 0 135667788999999999987 4555553 34445676 7888887776
Q ss_pred Cc
Q 022050 200 VE 201 (303)
Q Consensus 200 i~ 201 (303)
-.
T Consensus 232 ~~ 233 (311)
T 2cuk_A 232 AL 233 (311)
T ss_dssp GG
T ss_pred Cc
Confidence 33
No 159
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=98.11 E-value=2.3e-06 Score=80.21 Aligned_cols=96 Identities=16% Similarity=0.225 Sum_probs=68.2
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
-++|+|||.|.||..+|..+... | .+|..|+|++...+. ....
T Consensus 145 g~tvGIIG~G~IG~~vA~~l~~~-G-----~~V~~~d~~~~~~~~--------------------------~~~~----- 187 (330)
T 4e5n_A 145 NATVGFLGMGAIGLAMADRLQGW-G-----ATLQYHEAKALDTQT--------------------------EQRL----- 187 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHTTTS-C-----CEEEEECSSCCCHHH--------------------------HHHH-----
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC-C-----CEEEEECCCCCcHhH--------------------------HHhc-----
Confidence 48999999999999999999876 8 899999998743221 0000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH-HHHHHHhhccCCCCEEEEeeccC
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKGV 200 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~-~~~~vl-~~l~~~l~~~~~~~iivs~~nGi 200 (303)
.+.. .++++++++||+|++++|.. .++.++ ++....+++ ++++|.+..|=
T Consensus 188 ------------------------g~~~-~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~---gailIN~arg~ 239 (330)
T 4e5n_A 188 ------------------------GLRQ-VACSELFASSDFILLALPLNADTLHLVNAELLALVRP---GALLVNPCRGS 239 (330)
T ss_dssp ------------------------TEEE-CCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCT---TEEEEECSCGG
T ss_pred ------------------------Ccee-CCHHHHHhhCCEEEEcCCCCHHHHHHhCHHHHhhCCC---CcEEEECCCCc
Confidence 2222 36788889999999999964 334333 344555676 78888888774
Q ss_pred ccc
Q 022050 201 EAE 203 (303)
Q Consensus 201 ~~~ 203 (303)
...
T Consensus 240 ~vd 242 (330)
T 4e5n_A 240 VVD 242 (330)
T ss_dssp GBC
T ss_pred hhC
Confidence 443
No 160
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=98.10 E-value=1.4e-05 Score=63.77 Aligned_cols=38 Identities=16% Similarity=0.208 Sum_probs=33.7
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (303)
+++|.|+|+|.+|..++..|.+. | ++|++++++++.++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~-g-----~~v~~~d~~~~~~~ 43 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRM-G-----HEVLAVDINEEKVN 43 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-T-----CCCEEEESCHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHH
Confidence 46799999999999999999998 8 89999999876554
No 161
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=98.09 E-value=4.5e-06 Score=80.57 Aligned_cols=92 Identities=23% Similarity=0.304 Sum_probs=65.9
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
-++|+|||.|.||..+|..+..- | .+|..|++++... ..
T Consensus 156 gktvGIIGlG~IG~~vA~~l~~~-G-----~~V~~yd~~~~~~----------------------------~~------- 194 (416)
T 3k5p_A 156 GKTLGIVGYGNIGSQVGNLAESL-G-----MTVRYYDTSDKLQ----------------------------YG------- 194 (416)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECTTCCCC----------------------------BT-------
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC-C-----CEEEEECCcchhc----------------------------cc-------
Confidence 37999999999999999999877 8 8999999975311 00
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH-HHHHHHhhccCCCCEEEEeeccC
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKGV 200 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~-~~~~vl-~~l~~~l~~~~~~~iivs~~nGi 200 (303)
......++++++++||+|++++|.. .++.++ ++....+++ ++++|.+..|-
T Consensus 195 ------------------------~~~~~~sl~ell~~aDvV~lhvPlt~~T~~li~~~~l~~mk~---gailIN~aRG~ 247 (416)
T 3k5p_A 195 ------------------------NVKPAASLDELLKTSDVVSLHVPSSKSTSKLITEAKLRKMKK---GAFLINNARGS 247 (416)
T ss_dssp ------------------------TBEECSSHHHHHHHCSEEEECCCC-----CCBCHHHHHHSCT---TEEEEECSCTT
T ss_pred ------------------------CcEecCCHHHHHhhCCEEEEeCCCCHHHhhhcCHHHHhhCCC---CcEEEECCCCh
Confidence 1223357888899999999999985 344444 334445676 78888888774
Q ss_pred cc
Q 022050 201 EA 202 (303)
Q Consensus 201 ~~ 202 (303)
..
T Consensus 248 vv 249 (416)
T 3k5p_A 248 DV 249 (416)
T ss_dssp SB
T ss_pred hh
Confidence 44
No 162
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.08 E-value=6.3e-06 Score=68.11 Aligned_cols=76 Identities=18% Similarity=-0.026 Sum_probs=54.6
Q ss_pred CceEEEECC----ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhh
Q 022050 43 PLRIVGVGA----GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVE 118 (303)
Q Consensus 43 ~~kI~VIGa----G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~ 118 (303)
+.+|+|||+ |.||..++..|.+. | ++|+.++++.. -+. ..
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~-G-----~~v~~vnp~~~-g~~--------------------------i~--- 56 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQ-G-----YHVIPVSPKVA-GKT--------------------------LL--- 56 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHH-T-----CCEEEECSSST-TSE--------------------------ET---
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHC-C-----CEEEEeCCccc-ccc--------------------------cC---
Confidence 467999999 89999999999998 8 66555554430 000 00
Q ss_pred hhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHH
Q 022050 119 ARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISR 182 (303)
Q Consensus 119 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~ 182 (303)
..++..++++..+.+|++++++|+....++++++..
T Consensus 57 ----------------------------G~~~~~sl~el~~~~Dlvii~vp~~~v~~v~~~~~~ 92 (145)
T 2duw_A 57 ----------------------------GQQGYATLADVPEKVDMVDVFRNSEAAWGVAQEAIA 92 (145)
T ss_dssp ----------------------------TEECCSSTTTCSSCCSEEECCSCSTHHHHHHHHHHH
T ss_pred ----------------------------CeeccCCHHHcCCCCCEEEEEeCHHHHHHHHHHHHH
Confidence 223334455555678999999999999999988766
No 163
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=98.07 E-value=5.3e-06 Score=77.87 Aligned_cols=94 Identities=14% Similarity=0.045 Sum_probs=68.0
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
.-++|+|||.|.||..+|..+... | .+|..|+|+++.. . ....
T Consensus 164 ~g~tvgIIGlG~IG~~vA~~l~~~-G-----~~V~~~d~~~~~~-~--------------------------~~~~---- 206 (335)
T 2g76_A 164 NGKTLGILGLGRIGREVATRMQSF-G-----MKTIGYDPIISPE-V--------------------------SASF---- 206 (335)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTT-T-----CEEEEECSSSCHH-H--------------------------HHHT----
T ss_pred CcCEEEEEeECHHHHHHHHHHHHC-C-----CEEEEECCCcchh-h--------------------------hhhc----
Confidence 348999999999999999999877 8 8999999987531 1 0000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh-HHHHH-HHHHHHhhccCCCCEEEEeecc
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE-TKEVF-EEISRYWKERITVPVIISLAKG 199 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~-~~~vl-~~l~~~l~~~~~~~iivs~~nG 199 (303)
.+.. .++++++++||+|++++|... ++.++ ++....+++ ++++|.+..|
T Consensus 207 -------------------------g~~~-~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~---gailIN~arg 257 (335)
T 2g76_A 207 -------------------------GVQQ-LPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKK---GVRVVNCARG 257 (335)
T ss_dssp -------------------------TCEE-CCHHHHGGGCSEEEECCCCCTTTTTSBCHHHHTTSCT---TEEEEECSCT
T ss_pred -------------------------Ccee-CCHHHHHhcCCEEEEecCCCHHHHHhhCHHHHhhCCC---CcEEEECCCc
Confidence 1222 367788899999999999863 55555 345555676 7888877766
Q ss_pred Cc
Q 022050 200 VE 201 (303)
Q Consensus 200 i~ 201 (303)
=.
T Consensus 258 ~v 259 (335)
T 2g76_A 258 GI 259 (335)
T ss_dssp TS
T ss_pred cc
Confidence 33
No 164
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=98.07 E-value=2e-05 Score=73.26 Aligned_cols=80 Identities=21% Similarity=0.234 Sum_probs=59.0
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEE-EEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
++||+|||+|.||..++..|.+..+ .+++ ++++++++++++. .
T Consensus 4 ~~rvgiiG~G~~g~~~~~~l~~~~~-----~~l~av~d~~~~~~~~~a-------------------------~------ 47 (344)
T 3euw_A 4 TLRIALFGAGRIGHVHAANIAANPD-----LELVVIADPFIEGAQRLA-------------------------E------ 47 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTT-----EEEEEEECSSHHHHHHHH-------------------------H------
T ss_pred ceEEEEECCcHHHHHHHHHHHhCCC-----cEEEEEECCCHHHHHHHH-------------------------H------
Confidence 5899999999999999999887513 6655 7899887553211 0
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHHH
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEIS 181 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~--~aDlVIiaVp~~~~~~vl~~l~ 181 (303)
. .+....+|+++.+. ++|+|++++|+....+++.+..
T Consensus 48 ---~--------------------~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al 86 (344)
T 3euw_A 48 ---A--------------------NGAEAVASPDEVFARDDIDGIVIGSPTSTHVDLITRAV 86 (344)
T ss_dssp ---T--------------------TTCEEESSHHHHTTCSCCCEEEECSCGGGHHHHHHHHH
T ss_pred ---H--------------------cCCceeCCHHHHhcCCCCCEEEEeCCchhhHHHHHHHH
Confidence 0 02456678888887 7999999999998777666543
No 165
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=98.07 E-value=1.3e-06 Score=81.77 Aligned_cols=95 Identities=19% Similarity=0.298 Sum_probs=67.7
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
-++|+|||.|.||..+|..+... | ++|..|+|+++..+. ..
T Consensus 140 g~tvGIIGlG~IG~~vA~~l~~~-G-----~~V~~~dr~~~~~~~--------------------------~~------- 180 (324)
T 3hg7_A 140 GRTLLILGTGSIGQHIAHTGKHF-G-----MKVLGVSRSGRERAG--------------------------FD------- 180 (324)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCCCTT--------------------------CS-------
T ss_pred cceEEEEEECHHHHHHHHHHHhC-C-----CEEEEEcCChHHhhh--------------------------hh-------
Confidence 48999999999999999999887 8 899999998742210 00
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH-HHHHHHhhccCCCCEEEEeeccC
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKGV 200 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~-~~~~vl-~~l~~~l~~~~~~~iivs~~nGi 200 (303)
......++++++++||+|++++|.. .++.++ ++....+++ ++++|.+..|=
T Consensus 181 ------------------------~~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~~~~l~~mk~---gailIN~aRG~ 233 (324)
T 3hg7_A 181 ------------------------QVYQLPALNKMLAQADVIVSVLPATRETHHLFTASRFEHCKP---GAILFNVGRGN 233 (324)
T ss_dssp ------------------------EEECGGGHHHHHHTCSEEEECCCCCSSSTTSBCTTTTTCSCT---TCEEEECSCGG
T ss_pred ------------------------cccccCCHHHHHhhCCEEEEeCCCCHHHHHHhHHHHHhcCCC---CcEEEECCCch
Confidence 0111246788899999999999964 334433 223334566 78999888775
Q ss_pred ccc
Q 022050 201 EAE 203 (303)
Q Consensus 201 ~~~ 203 (303)
...
T Consensus 234 ~vd 236 (324)
T 3hg7_A 234 AIN 236 (324)
T ss_dssp GBC
T ss_pred hhC
Confidence 544
No 166
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=98.06 E-value=3.7e-06 Score=78.80 Aligned_cols=93 Identities=18% Similarity=0.212 Sum_probs=66.1
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
-++|+|||.|.||..+|..+... | .+|..|+|+++... .. .
T Consensus 146 g~~vgIiG~G~IG~~~A~~l~~~-G-----~~V~~~d~~~~~~~-----------~~-------------~--------- 186 (333)
T 1j4a_A 146 DQVVGVVGTGHIGQVFMQIMEGF-G-----AKVITYDIFRNPEL-----------EK-------------K--------- 186 (333)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCHHH-----------HH-------------T---------
T ss_pred CCEEEEEccCHHHHHHHHHHHHC-C-----CEEEEECCCcchhH-----------Hh-------------h---------
Confidence 37999999999999999999887 8 89999999875320 00 0
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh-HHHHH-HHHHHHhhccCCCCEEEEeeccC
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE-TKEVF-EEISRYWKERITVPVIISLAKGV 200 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~-~~~vl-~~l~~~l~~~~~~~iivs~~nGi 200 (303)
..+..++++++++||+|++++|... ++.++ ++....+++ ++++|.+..|=
T Consensus 187 -------------------------~~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~---ga~lIn~arg~ 238 (333)
T 1j4a_A 187 -------------------------GYYVDSLDDLYKQADVISLHVPDVPANVHMINDESIAKMKQ---DVVIVNVSRGP 238 (333)
T ss_dssp -------------------------TCBCSCHHHHHHHCSEEEECSCCCGGGTTCBSHHHHHHSCT---TEEEEECSCGG
T ss_pred -------------------------CeecCCHHHHHhhCCEEEEcCCCcHHHHHHHhHHHHhhCCC---CcEEEECCCCc
Confidence 0112357778889999999999653 44444 334445666 78888887764
Q ss_pred cc
Q 022050 201 EA 202 (303)
Q Consensus 201 ~~ 202 (303)
..
T Consensus 239 ~v 240 (333)
T 1j4a_A 239 LV 240 (333)
T ss_dssp GB
T ss_pred cc
Confidence 33
No 167
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=98.05 E-value=9.3e-06 Score=72.94 Aligned_cols=109 Identities=13% Similarity=0.197 Sum_probs=69.8
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEE-EEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
||||+|+|+|.||..++..+.+. + +++. +++++++. .
T Consensus 3 MmkI~ViGaGrMG~~i~~~l~~~-~-----~eLva~~d~~~~~--~---------------------------------- 40 (243)
T 3qy9_A 3 SMKILLIGYGAMNQRVARLAEEK-G-----HEIVGVIENTPKA--T---------------------------------- 40 (243)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEECSSCC--------------------------------------
T ss_pred ceEEEEECcCHHHHHHHHHHHhC-C-----CEEEEEEecCccc--c----------------------------------
Confidence 68999999999999999999987 6 5443 35665431 0
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeeccCc
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nGi~ 201 (303)
.++.+++|+++.. ++|++|-++.+....+.++ +.. +..+|+.+.|++
T Consensus 41 ------------------------~gv~v~~dl~~l~-~~DVvIDft~p~a~~~~~~-----l~~---g~~vVigTTG~s 87 (243)
T 3qy9_A 41 ------------------------TPYQQYQHIADVK-GADVAIDFSNPNLLFPLLD-----EDF---HLPLVVATTGEK 87 (243)
T ss_dssp ------------------------CCSCBCSCTTTCT-TCSEEEECSCHHHHHHHHT-----SCC---CCCEEECCCSSH
T ss_pred ------------------------CCCceeCCHHHHh-CCCEEEEeCChHHHHHHHH-----Hhc---CCceEeCCCCCC
Confidence 0233446666666 8999997776665555444 343 556677777876
Q ss_pred cccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHH
Q 022050 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASE 239 (303)
Q Consensus 202 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~e 239 (303)
.+. .+.+.+... ...++..|||+.-
T Consensus 88 ~e~---------~~~l~~aa~----~~~v~~a~N~S~G 112 (243)
T 3qy9_A 88 EKL---------LNKLDELSQ----NMPVFFSANMSYG 112 (243)
T ss_dssp HHH---------HHHHHHHTT----TSEEEECSSCCHH
T ss_pred HHH---------HHHHHHHHh----cCCEEEECCccHH
Confidence 531 123444332 1346889999653
No 168
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=98.04 E-value=2.5e-05 Score=73.30 Aligned_cols=82 Identities=18% Similarity=0.132 Sum_probs=58.0
Q ss_pred CceEEEECCChHHHHHHHHHH-HhcCCCCCCeeEE-EEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQ-DSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La-~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (303)
++||+|||+|.||...+..+. ...+ .+++ ++++++++++++.+ ..
T Consensus 23 ~~rvgiIG~G~~g~~~~~~l~~~~~~-----~~lvav~d~~~~~~~~~a~-------------------------~~--- 69 (357)
T 3ec7_A 23 TLKAGIVGIGMIGSDHLRRLANTVSG-----VEVVAVCDIVAGRAQAALD-------------------------KY--- 69 (357)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCTT-----EEEEEEECSSTTHHHHHHH-------------------------HH---
T ss_pred eeeEEEECCcHHHHHHHHHHHhhCCC-----cEEEEEEeCCHHHHHHHHH-------------------------Hh---
Confidence 489999999999999999998 4213 6655 78999876543210 00
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHHH
Q 022050 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEIS 181 (303)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~--~aDlVIiaVp~~~~~~vl~~l~ 181 (303)
+ ......+|+++.+. +.|+|++++|+....+++.+..
T Consensus 70 -g-----------------------~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al 108 (357)
T 3ec7_A 70 -A-----------------------IEAKDYNDYHDLINDKDVEVVIITASNEAHADVAVAAL 108 (357)
T ss_dssp -T-----------------------CCCEEESSHHHHHHCTTCCEEEECSCGGGHHHHHHHHH
T ss_pred -C-----------------------CCCeeeCCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHH
Confidence 0 01446678888776 5899999999988776665543
No 169
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=98.04 E-value=3e-05 Score=71.50 Aligned_cols=80 Identities=16% Similarity=0.188 Sum_probs=57.4
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeE-EEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
|+||+|||+|.||..++..+.+. + +.++ .++++++++.+++. .
T Consensus 1 ~~~vgiiG~G~~g~~~~~~l~~~-~----~~~~~~v~d~~~~~~~~~~-------------------------~------ 44 (325)
T 2ho3_A 1 MLKLGVIGTGAISHHFIEAAHTS-G----EYQLVAIYSRKLETAATFA-------------------------S------ 44 (325)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-T----SEEEEEEECSSHHHHHHHG-------------------------G------
T ss_pred CeEEEEEeCCHHHHHHHHHHHhC-C----CeEEEEEEeCCHHHHHHHH-------------------------H------
Confidence 57999999999999999999875 3 1555 47888876543210 0
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHh-cCCCEEEEecCchhHHHHHHHH
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAV-WDADIVINGLPSTETKEVFEEI 180 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~-~~aDlVIiaVp~~~~~~vl~~l 180 (303)
.+ ......+|.++.+ .++|+|++++|+....+++.+.
T Consensus 45 ---~~-------------------~~~~~~~~~~~~l~~~~D~V~i~tp~~~h~~~~~~a 82 (325)
T 2ho3_A 45 ---RY-------------------QNIQLFDQLEVFFKSSFDLVYIASPNSLHFAQAKAA 82 (325)
T ss_dssp ---GS-------------------SSCEEESCHHHHHTSSCSEEEECSCGGGHHHHHHHH
T ss_pred ---Hc-------------------CCCeEeCCHHHHhCCCCCEEEEeCChHHHHHHHHHH
Confidence 00 0124567888877 6899999999998877666654
No 170
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=98.04 E-value=6.1e-06 Score=77.44 Aligned_cols=94 Identities=22% Similarity=0.223 Sum_probs=67.2
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
-++|+|||.|.||..+|..+... | .+|..|+|+++.... ..
T Consensus 141 g~tvgIiG~G~IG~~vA~~l~~~-G-----~~V~~~d~~~~~~~~----------------------------~~----- 181 (334)
T 2pi1_A 141 RLTLGVIGTGRIGSRVAMYGLAF-G-----MKVLCYDVVKREDLK----------------------------EK----- 181 (334)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCHHHH----------------------------HT-----
T ss_pred CceEEEECcCHHHHHHHHHHHHC-c-----CEEEEECCCcchhhH----------------------------hc-----
Confidence 37999999999999999999887 8 899999998753210 00
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH-HHHHHHhhccCCCCEEEEeeccC
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKGV 200 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~-~~~~vl-~~l~~~l~~~~~~~iivs~~nGi 200 (303)
.... .++++++++||+|++++|.. .++.++ ++....+++ ++++|.+..|=
T Consensus 182 ------------------------g~~~-~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~---gailIN~aRg~ 233 (334)
T 2pi1_A 182 ------------------------GCVY-TSLDELLKESDVISLHVPYTKETHHMINEERISLMKD---GVYLINTARGK 233 (334)
T ss_dssp ------------------------TCEE-CCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCT---TEEEEECSCGG
T ss_pred ------------------------Ccee-cCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhhCCC---CcEEEECCCCc
Confidence 1222 24788889999999999964 333333 334445676 78888887775
Q ss_pred ccc
Q 022050 201 EAE 203 (303)
Q Consensus 201 ~~~ 203 (303)
...
T Consensus 234 ~vd 236 (334)
T 2pi1_A 234 VVD 236 (334)
T ss_dssp GBC
T ss_pred ccC
Confidence 443
No 171
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=98.03 E-value=7.5e-06 Score=77.13 Aligned_cols=93 Identities=20% Similarity=0.230 Sum_probs=66.7
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
-++|+|||.|.||..+|..+..- | .+|..|+|+++... ..
T Consensus 148 gktvgIiGlG~IG~~vA~~l~~~-G-----~~V~~~d~~~~~~~----------------------------~~------ 187 (343)
T 2yq5_A 148 NLTVGLIGVGHIGSAVAEIFSAM-G-----AKVIAYDVAYNPEF----------------------------EP------ 187 (343)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCGGG----------------------------TT------
T ss_pred CCeEEEEecCHHHHHHHHHHhhC-C-----CEEEEECCChhhhh----------------------------hc------
Confidence 37999999999999999999887 8 89999999875210 00
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH-HHHHHHhhccCCCCEEEEeeccC
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKGV 200 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~-~~~~vl-~~l~~~l~~~~~~~iivs~~nGi 200 (303)
.... .++++++++||+|++++|.. .++.++ ++....+++ ++++|.+..|=
T Consensus 188 ------------------------~~~~-~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~---gailIN~aRg~ 239 (343)
T 2yq5_A 188 ------------------------FLTY-TDFDTVLKEADIVSLHTPLFPSTENMIGEKQLKEMKK---SAYLINCARGE 239 (343)
T ss_dssp ------------------------TCEE-CCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCT---TCEEEECSCGG
T ss_pred ------------------------cccc-cCHHHHHhcCCEEEEcCCCCHHHHHHhhHHHHhhCCC---CcEEEECCCCh
Confidence 1222 27888899999999999963 233332 233344676 78999888775
Q ss_pred ccc
Q 022050 201 EAE 203 (303)
Q Consensus 201 ~~~ 203 (303)
...
T Consensus 240 ~vd 242 (343)
T 2yq5_A 240 LVD 242 (343)
T ss_dssp GBC
T ss_pred hhh
Confidence 443
No 172
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=98.03 E-value=1.4e-05 Score=73.25 Aligned_cols=91 Identities=15% Similarity=0.256 Sum_probs=63.1
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
.-++|+|||+|.||.++|..+... | .+|++|+|++++.+.+. ..
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~-G-----~~V~~~dr~~~~~~~~~--------------------------~~---- 197 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAAL-G-----AKVKVGARESDLLARIA--------------------------EM---- 197 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESSHHHHHHHH--------------------------HT----
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhC-C-----CEEEEEECCHHHHHHHH--------------------------HC----
Confidence 348999999999999999999887 8 89999999876432110 00
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEE--ecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeecc
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKV--VTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~--t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nG 199 (303)
.... ..++++.++++|+|++++|...+.+ +....+++ +.++|.+..|
T Consensus 198 -------------------------g~~~~~~~~l~~~l~~aDvVi~~~p~~~i~~---~~l~~mk~---~~~lin~ar~ 246 (293)
T 3d4o_A 198 -------------------------GMEPFHISKAAQELRDVDVCINTIPALVVTA---NVLAEMPS---HTFVIDLASK 246 (293)
T ss_dssp -------------------------TSEEEEGGGHHHHTTTCSEEEECCSSCCBCH---HHHHHSCT---TCEEEECSST
T ss_pred -------------------------CCeecChhhHHHHhcCCCEEEECCChHHhCH---HHHHhcCC---CCEEEEecCC
Confidence 0111 1356677889999999999864322 12223565 6788877654
No 173
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=98.03 E-value=2.8e-05 Score=71.92 Aligned_cols=79 Identities=15% Similarity=0.184 Sum_probs=57.5
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEE-EEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
++||+|||+|.||..++..+.+..+ .+++ ++++++++.+++. ..
T Consensus 3 ~~~vgiiG~G~~g~~~~~~l~~~~~-----~~l~av~d~~~~~~~~~~-------------------------~~----- 47 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKVHAKAVSGNAD-----ARLVAVADAFPAAAEAIA-------------------------GA----- 47 (331)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTT-----EEEEEEECSSHHHHHHHH-------------------------HH-----
T ss_pred ceEEEEECCCHHHHHHHHHHhhCCC-----cEEEEEECCCHHHHHHHH-------------------------HH-----
Confidence 4799999999999999999987413 6665 7899887554311 00
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHHH
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEIS 181 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~--~aDlVIiaVp~~~~~~vl~~l~ 181 (303)
.++. .+|+++.+. ++|+|++++|+....+++.+..
T Consensus 48 ------------------------~~~~-~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al 84 (331)
T 4hkt_A 48 ------------------------YGCE-VRTIDAIEAAADIDAVVICTPTDTHADLIERFA 84 (331)
T ss_dssp ------------------------TTCE-ECCHHHHHHCTTCCEEEECSCGGGHHHHHHHHH
T ss_pred ------------------------hCCC-cCCHHHHhcCCCCCEEEEeCCchhHHHHHHHHH
Confidence 0234 577888776 7999999999988776665543
No 174
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=98.02 E-value=1.6e-05 Score=72.87 Aligned_cols=94 Identities=7% Similarity=0.088 Sum_probs=63.1
Q ss_pred CceEEEECCChHHHH-HHHHHHHhcCCCCCCeeEE-EEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhh
Q 022050 43 PLRIVGVGAGAWGSV-FTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (303)
Q Consensus 43 ~~kI~VIGaG~mG~a-iA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (303)
++||+|||+|.||.. ++..+.+..+ .++. ++++++++++++.+ ..
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~~~~-----~~l~av~d~~~~~~~~~a~-------------------------~~--- 52 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTKSER-----FEFVGAFTPNKVKREKICS-------------------------DY--- 52 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTSCSS-----SEEEEEECSCHHHHHHHHH-------------------------HH---
T ss_pred cCcEEEEecCHHHHHHHHHHHHhCCC-----eEEEEEECCCHHHHHHHHH-------------------------Hc---
Confidence 479999999999996 8887876413 5665 78999876543210 00
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeeccC
Q 022050 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (303)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nGi 200 (303)
++...+|+++.++++|+|++++|+....+++.+.. .. +..|+ +-|.+
T Consensus 53 --------------------------~~~~~~~~~~ll~~~D~V~i~tp~~~h~~~~~~al---~~---gk~vl-~EKP~ 99 (308)
T 3uuw_A 53 --------------------------RIMPFDSIESLAKKCDCIFLHSSTETHYEIIKILL---NL---GVHVY-VDKPL 99 (308)
T ss_dssp --------------------------TCCBCSCHHHHHTTCSEEEECCCGGGHHHHHHHHH---HT---TCEEE-ECSSS
T ss_pred --------------------------CCCCcCCHHHHHhcCCEEEEeCCcHhHHHHHHHHH---HC---CCcEE-EcCCC
Confidence 11125678888889999999999998777666543 33 44433 45555
Q ss_pred cc
Q 022050 201 EA 202 (303)
Q Consensus 201 ~~ 202 (303)
..
T Consensus 100 ~~ 101 (308)
T 3uuw_A 100 AS 101 (308)
T ss_dssp SS
T ss_pred CC
Confidence 44
No 175
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.99 E-value=4.7e-05 Score=64.18 Aligned_cols=40 Identities=15% Similarity=0.171 Sum_probs=33.6
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
.++|+|+|+|.||..+|..|.+..| ++|+++++++++++.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g-----~~V~vid~~~~~~~~ 78 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYG-----KISLGIEIREEAAQQ 78 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHC-----SCEEEEESCHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccC-----CeEEEEECCHHHHHH
Confidence 4689999999999999999976315 899999999876653
No 176
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=97.99 E-value=1.9e-05 Score=69.72 Aligned_cols=95 Identities=15% Similarity=0.279 Sum_probs=60.6
Q ss_pred hhhhhHHHHHhccCCCCCceEEEECCChHHHHHHHH--HHHhcCCCCCCee-EEEEecCCchhhhhhhhhHHHHHhhhhh
Q 022050 26 EERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAM--LQDSYGYLRDKVL-IRIWRRPGRSVDRATAEHLFEVINSRED 102 (303)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~kI~VIGaG~mG~aiA~~--La~~~G~~~~~~~-V~l~~r~~~~~~~~~~~~l~~~i~~~~~ 102 (303)
++-++++++.++... .+||+|||+|++|.+++.. +... | ++ |-++|.++++...
T Consensus 70 ~~L~~~~~~~lg~~~--~~rV~IIGAG~~G~~La~~~~~~~~-g-----~~iVg~~D~dp~k~g~--------------- 126 (215)
T 2vt3_A 70 DYLLSFFRKTLDQDE--MTDVILIGVGNLGTAFLHYNFTKNN-N-----TKISMAFDINESKIGT--------------- 126 (215)
T ss_dssp HHHHHHHHHHHHHC-----CEEEECCSHHHHHHHHCC------------CCEEEEEESCTTTTTC---------------
T ss_pred HHHHHHHHHHhCcCC--CCEEEEEccCHHHHHHHHHHhcccC-C-----cEEEEEEeCCHHHHHh---------------
Confidence 333455566656543 3789999999999999994 3333 4 44 5578988875421
Q ss_pred HHHHhhhhcccchhhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHH
Q 022050 103 VLRRLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISR 182 (303)
Q Consensus 103 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~ 182 (303)
...++ ++...+++++.+++.|++++|+|+...+++++.+..
T Consensus 127 ----------~i~gv-----------------------------~V~~~~dl~eli~~~D~ViIAvPs~~~~ei~~~l~~ 167 (215)
T 2vt3_A 127 ----------EVGGV-----------------------------PVYNLDDLEQHVKDESVAILTVPAVAAQSITDRLVA 167 (215)
T ss_dssp ----------EETTE-----------------------------EEEEGGGHHHHCSSCCEEEECSCHHHHHHHHHHHHH
T ss_pred ----------HhcCC-----------------------------eeechhhHHHHHHhCCEEEEecCchhHHHHHHHHHH
Confidence 11111 233456777777666999999999988888877654
No 177
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=97.98 E-value=8e-06 Score=73.44 Aligned_cols=36 Identities=22% Similarity=0.463 Sum_probs=32.6
Q ss_pred eEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhh
Q 022050 45 RIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (303)
Q Consensus 45 kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (303)
||+|||+|.||.+++..|... | .+|++|+|++++.+
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~-g-----~~v~v~~r~~~~~~ 153 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREA-G-----LEVWVWNRTPQRAL 153 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSHHHHH
T ss_pred eEEEECCcHHHHHHHHHHHHC-C-----CEEEEEECCHHHHH
Confidence 899999999999999999998 8 78999999986544
No 178
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=97.97 E-value=1.6e-05 Score=72.98 Aligned_cols=93 Identities=22% Similarity=0.267 Sum_probs=63.9
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
..++|+|||+|.||.++|..+... | .+|++|+|++++.+.+. + . +.
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~-G-----~~V~~~d~~~~~~~~~~---------~--------------~-g~---- 201 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAAL-G-----ANVKVGARSSAHLARIT---------E--------------M-GL---- 201 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESSHHHHHHHH---------H--------------T-TC----
T ss_pred CCCEEEEEcccHHHHHHHHHHHHC-C-----CEEEEEECCHHHHHHHH---------H--------------C-CC----
Confidence 458999999999999999999887 8 89999999876432210 0 0 00
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeecc
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nG 199 (303)
......++++.++++|+|++++|...+.+ +....+++ ++++|.+..|
T Consensus 202 -------------------------~~~~~~~l~~~l~~aDvVi~~~p~~~i~~---~~~~~mk~---g~~lin~a~g 248 (300)
T 2rir_A 202 -------------------------VPFHTDELKEHVKDIDICINTIPSMILNQ---TVLSSMTP---KTLILDLASR 248 (300)
T ss_dssp -------------------------EEEEGGGHHHHSTTCSEEEECCSSCCBCH---HHHTTSCT---TCEEEECSST
T ss_pred -------------------------eEEchhhHHHHhhCCCEEEECCChhhhCH---HHHHhCCC---CCEEEEEeCC
Confidence 00011456777889999999999854321 22234565 7788877654
No 179
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=97.97 E-value=3.2e-05 Score=71.95 Aligned_cols=80 Identities=16% Similarity=0.151 Sum_probs=56.9
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEE-EEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
++||+|||+|.||..++..+.+..+ .+++ ++++++++++++.+ ..
T Consensus 2 ~~rvgiIG~G~~g~~~~~~l~~~~~-----~~l~av~d~~~~~~~~~~~-------------------------~~---- 47 (344)
T 3ezy_A 2 SLRIGVIGLGRIGTIHAENLKMIDD-----AILYAISDVREDRLREMKE-------------------------KL---- 47 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHGGGSTT-----EEEEEEECSCHHHHHHHHH-------------------------HH----
T ss_pred eeEEEEEcCCHHHHHHHHHHHhCCC-----cEEEEEECCCHHHHHHHHH-------------------------Hh----
Confidence 4799999999999999998877413 5655 78998876543110 00
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHH
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEI 180 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~--~aDlVIiaVp~~~~~~vl~~l 180 (303)
.-....+|+++.+. ++|+|++|+|+....+++.+.
T Consensus 48 ------------------------~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~a 84 (344)
T 3ezy_A 48 ------------------------GVEKAYKDPHELIEDPNVDAVLVCSSTNTHSELVIAC 84 (344)
T ss_dssp ------------------------TCSEEESSHHHHHHCTTCCEEEECSCGGGHHHHHHHH
T ss_pred ------------------------CCCceeCCHHHHhcCCCCCEEEEcCCCcchHHHHHHH
Confidence 01235678888776 799999999998776666554
No 180
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=97.96 E-value=9.1e-06 Score=76.13 Aligned_cols=90 Identities=14% Similarity=0.177 Sum_probs=65.4
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
-++|+|||.|.||..+|..+... | .+|..|+|+++.. ...
T Consensus 145 g~~vgIiG~G~IG~~~A~~l~~~-G-----~~V~~~d~~~~~~----------------------------~~~------ 184 (333)
T 1dxy_A 145 QQTVGVMGTGHIGQVAIKLFKGF-G-----AKVIAYDPYPMKG----------------------------DHP------ 184 (333)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCSS----------------------------CCT------
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-C-----CEEEEECCCcchh----------------------------hHh------
Confidence 47999999999999999999887 8 8999999986421 000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh-HHHHH-HHHHHHhhccCCCCEEEEeeccC
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE-TKEVF-EEISRYWKERITVPVIISLAKGV 200 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~-~~~vl-~~l~~~l~~~~~~~iivs~~nGi 200 (303)
.... .++++.+++||+|++++|... ++.++ ++....+++ ++++|.+..|=
T Consensus 185 ------------------------~~~~-~~l~ell~~aDvV~~~~P~~~~t~~li~~~~l~~mk~---ga~lIn~srg~ 236 (333)
T 1dxy_A 185 ------------------------DFDY-VSLEDLFKQSDVIDLHVPGIEQNTHIINEAAFNLMKP---GAIVINTARPN 236 (333)
T ss_dssp ------------------------TCEE-CCHHHHHHHCSEEEECCCCCGGGTTSBCHHHHHHSCT---TEEEEECSCTT
T ss_pred ------------------------cccc-CCHHHHHhcCCEEEEcCCCchhHHHHhCHHHHhhCCC---CcEEEECCCCc
Confidence 0122 367788889999999999753 44444 334455676 78888777663
No 181
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=97.95 E-value=4.5e-05 Score=70.94 Aligned_cols=81 Identities=17% Similarity=0.130 Sum_probs=57.3
Q ss_pred CceEEEECCChHHHHHHHHHH-HhcCCCCCCeeEE-EEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQ-DSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La-~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (303)
++||+|||+|.||..++..+. ...+ .+++ ++++++++.+++.+ .
T Consensus 2 ~~rigiIG~G~~g~~~~~~l~~~~~~-----~~l~av~d~~~~~~~~~~~-------------------------~---- 47 (344)
T 3mz0_A 2 SLRIGVIGTGAIGKEHINRITNKLSG-----AEIVAVTDVNQEAAQKVVE-------------------------Q---- 47 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCSS-----EEEEEEECSSHHHHHHHHH-------------------------H----
T ss_pred eEEEEEECccHHHHHHHHHHHhhCCC-----cEEEEEEcCCHHHHHHHHH-------------------------H----
Confidence 379999999999999999998 4313 5655 78998876543110 0
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcC--CCEEEEecCchhHHHHHHHH
Q 022050 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWD--ADIVINGLPSTETKEVFEEI 180 (303)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~--aDlVIiaVp~~~~~~vl~~l 180 (303)
+. ....+.+|+++.+++ .|+|++++|+....+++.+.
T Consensus 48 -----~g------------------~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~a 86 (344)
T 3mz0_A 48 -----YQ------------------LNATVYPNDDSLLADENVDAVLVTSWGPAHESSVLKA 86 (344)
T ss_dssp -----TT------------------CCCEEESSHHHHHHCTTCCEEEECSCGGGHHHHHHHH
T ss_pred -----hC------------------CCCeeeCCHHHHhcCCCCCEEEECCCchhHHHHHHHH
Confidence 00 014566888887765 89999999999877766654
No 182
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=97.94 E-value=8.1e-06 Score=76.41 Aligned_cols=92 Identities=17% Similarity=0.167 Sum_probs=65.7
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
-++|+|||.|.||..+|..+... | .+|..|+|+++.. ...
T Consensus 146 g~~vgIiG~G~IG~~~A~~l~~~-G-----~~V~~~d~~~~~~----------------------------~~~------ 185 (331)
T 1xdw_A 146 NCTVGVVGLGRIGRVAAQIFHGM-G-----ATVIGEDVFEIKG----------------------------IED------ 185 (331)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCCS----------------------------CTT------
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-C-----CEEEEECCCccHH----------------------------HHh------
Confidence 37999999999999999999887 8 8999999986421 000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH-HHHHHHhhccCCCCEEEEeeccC
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKGV 200 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~-~~~~vl-~~l~~~l~~~~~~~iivs~~nGi 200 (303)
.+.. .++++++++||+|++++|.. .++.++ ++....+++ ++++|.+..|=
T Consensus 186 ------------------------~~~~-~~l~ell~~aDvV~~~~p~t~~t~~li~~~~l~~mk~---ga~lin~srg~ 237 (331)
T 1xdw_A 186 ------------------------YCTQ-VSLDEVLEKSDIITIHAPYIKENGAVVTRDFLKKMKD---GAILVNCARGQ 237 (331)
T ss_dssp ------------------------TCEE-CCHHHHHHHCSEEEECCCCCTTTCCSBCHHHHHTSCT---TEEEEECSCGG
T ss_pred ------------------------cccc-CCHHHHHhhCCEEEEecCCchHHHHHhCHHHHhhCCC---CcEEEECCCcc
Confidence 0112 36778888999999999974 333333 334445676 78888877764
Q ss_pred cc
Q 022050 201 EA 202 (303)
Q Consensus 201 ~~ 202 (303)
..
T Consensus 238 ~v 239 (331)
T 1xdw_A 238 LV 239 (331)
T ss_dssp GB
T ss_pred cc
Confidence 33
No 183
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=97.94 E-value=4e-05 Score=71.14 Aligned_cols=102 Identities=14% Similarity=0.214 Sum_probs=67.4
Q ss_pred ceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 44 ~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
|||+|+|+ |.+|..++..|+.. |.. ++|.++|+++. +. . ... +.+.
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~-~~~---~ev~L~Di~~~--~~-----~--a~d---------------L~~~----- 47 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNS-PLV---SRLTLYDIAHT--PG-----V--AAD---------------LSHI----- 47 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTC-TTC---SEEEEEESSSH--HH-----H--HHH---------------HTTS-----
T ss_pred CEEEEECCCChHHHHHHHHHHhC-CCC---cEEEEEeCCcc--HH-----H--HHH---------------Hhcc-----
Confidence 79999998 99999999999987 621 58999999872 11 0 000 1000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEE---ecCHHHHhcCCCEEEEecC--c--------------hhHHHHHHHHHHH
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKV---VTNLQEAVWDADIVINGLP--S--------------TETKEVFEEISRY 183 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~---t~d~~~a~~~aDlVIiaVp--~--------------~~~~~vl~~l~~~ 183 (303)
..+ .+++. ++|.++++++||+||++.. . ..++++.+.+.++
T Consensus 48 --~~~------------------~~l~~~~~t~d~~~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~ 107 (314)
T 1mld_A 48 --ETR------------------ATVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQH 107 (314)
T ss_dssp --SSS------------------CEEEEEESGGGHHHHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred --CcC------------------ceEEEecCCCCHHHHhCCCCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 000 13454 3578888999999999872 2 2356667777776
Q ss_pred hhccCCCCEEEEeeccCcc
Q 022050 184 WKERITVPVIISLAKGVEA 202 (303)
Q Consensus 184 l~~~~~~~iivs~~nGi~~ 202 (303)
.+ +..++..+|.+..
T Consensus 108 ~p----~a~viv~sNPv~~ 122 (314)
T 1mld_A 108 CP----DAMICIISNPVNS 122 (314)
T ss_dssp CT----TSEEEECSSCHHH
T ss_pred CC----CeEEEEECCCcch
Confidence 54 5677777776553
No 184
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=97.93 E-value=1.8e-05 Score=75.21 Aligned_cols=95 Identities=18% Similarity=0.170 Sum_probs=66.7
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
-++|+|||.|.||..+|..+..- | .+|..|+++... +. ...
T Consensus 176 gktvGIIGlG~IG~~vA~~l~~f-G-----~~V~~~d~~~~~-~~--------------------------~~~------ 216 (365)
T 4hy3_A 176 GSEIGIVGFGDLGKALRRVLSGF-R-----ARIRVFDPWLPR-SM--------------------------LEE------ 216 (365)
T ss_dssp SSEEEEECCSHHHHHHHHHHTTS-C-----CEEEEECSSSCH-HH--------------------------HHH------
T ss_pred CCEEEEecCCcccHHHHHhhhhC-C-----CEEEEECCCCCH-HH--------------------------Hhh------
Confidence 37999999999999999998776 7 899999998532 10 000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHH-HHHHHHhhccCCCCEEEEeeccC
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKGV 200 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~-~~~~vl-~~l~~~l~~~~~~~iivs~~nGi 200 (303)
..+.. .++++.+++||+|++++|.. .++.++ ++....+++ ++++|.+..|=
T Consensus 217 -----------------------~g~~~-~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mk~---gailIN~aRG~ 269 (365)
T 4hy3_A 217 -----------------------NGVEP-ASLEDVLTKSDFIFVVAAVTSENKRFLGAEAFSSMRR---GAAFILLSRAD 269 (365)
T ss_dssp -----------------------TTCEE-CCHHHHHHSCSEEEECSCSSCC---CCCHHHHHTSCT---TCEEEECSCGG
T ss_pred -----------------------cCeee-CCHHHHHhcCCEEEEcCcCCHHHHhhcCHHHHhcCCC---CcEEEECcCCc
Confidence 01222 46888899999999999975 355444 344455677 78999888774
Q ss_pred ccc
Q 022050 201 EAE 203 (303)
Q Consensus 201 ~~~ 203 (303)
..+
T Consensus 270 ~vd 272 (365)
T 4hy3_A 270 VVD 272 (365)
T ss_dssp GSC
T ss_pred hhC
Confidence 443
No 185
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=97.93 E-value=5.4e-05 Score=70.16 Aligned_cols=80 Identities=20% Similarity=0.229 Sum_probs=56.2
Q ss_pred CCceEEEECCChHHHHHHHHHH-HhcCCCCCCee-EEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQ-DSYGYLRDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La-~~~G~~~~~~~-V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~ 119 (303)
.++||+|||+|.||..++..+. ...+ .+ |.++++++++++++. +
T Consensus 7 ~~~~v~iiG~G~ig~~~~~~l~~~~~~-----~~~vav~d~~~~~~~~~a-------------------------~---- 52 (346)
T 3cea_A 7 KPLRAAIIGLGRLGERHARHLVNKIQG-----VKLVAACALDSNQLEWAK-------------------------N---- 52 (346)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHTCSS-----EEEEEEECSCHHHHHHHH-------------------------H----
T ss_pred CcceEEEEcCCHHHHHHHHHHHhcCCC-----cEEEEEecCCHHHHHHHH-------------------------H----
Confidence 4589999999999999999987 4313 56 457899886553211 0
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCe-EEecCHHHHhc--CCCEEEEecCchhHHHHHHHH
Q 022050 120 RLGDRTLHADEILKDGFCLNMIDTPLCPL-KVVTNLQEAVW--DADIVINGLPSTETKEVFEEI 180 (303)
Q Consensus 120 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i-~~t~d~~~a~~--~aDlVIiaVp~~~~~~vl~~l 180 (303)
.+ ++ .+.+|.++.+. ++|+|++++|+....+++.+.
T Consensus 53 -----~~--------------------g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~a 91 (346)
T 3cea_A 53 -----EL--------------------GVETTYTNYKDMIDTENIDAIFIVAPTPFHPEMTIYA 91 (346)
T ss_dssp -----TT--------------------CCSEEESCHHHHHTTSCCSEEEECSCGGGHHHHHHHH
T ss_pred -----Hh--------------------CCCcccCCHHHHhcCCCCCEEEEeCChHhHHHHHHHH
Confidence 00 12 35577888775 699999999998776665543
No 186
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=97.92 E-value=2.6e-05 Score=72.27 Aligned_cols=80 Identities=15% Similarity=0.070 Sum_probs=57.2
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEE-EEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (303)
.++||+|||+|.||..++..|.+..+ .+|+ ++++++++.+++.+ ..
T Consensus 4 ~~~~igiiG~G~~g~~~~~~l~~~~~-----~~l~av~d~~~~~~~~~~~-------------------------~~--- 50 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRFVAGLRESAQ-----AEVRGIASRRLENAQKMAK-------------------------EL--- 50 (330)
T ss_dssp CCEEEEECSCCTTHHHHHHHHHHSSS-----EEEEEEBCSSSHHHHHHHH-------------------------HT---
T ss_pred CeEEEEEECchHHHHHHHHHHHhCCC-----cEEEEEEeCCHHHHHHHHH-------------------------Hc---
Confidence 35899999999999999999987513 5665 78998876543110 00
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCe-EEecCHHHHhc--CCCEEEEecCchhHHHHHHHH
Q 022050 121 LGDRTLHADEILKDGFCLNMIDTPLCPL-KVVTNLQEAVW--DADIVINGLPSTETKEVFEEI 180 (303)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i-~~t~d~~~a~~--~aDlVIiaVp~~~~~~vl~~l 180 (303)
++ .+.+|.++.+. ++|+|++++|+....+++.+.
T Consensus 51 --------------------------~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~a 87 (330)
T 3e9m_A 51 --------------------------AIPVAYGSYEELCKDETIDIIYIPTYNQGHYSAAKLA 87 (330)
T ss_dssp --------------------------TCCCCBSSHHHHHHCTTCSEEEECCCGGGHHHHHHHH
T ss_pred --------------------------CCCceeCCHHHHhcCCCCCEEEEcCCCHHHHHHHHHH
Confidence 11 24467877776 789999999999877666554
No 187
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=97.90 E-value=8.7e-06 Score=76.83 Aligned_cols=100 Identities=11% Similarity=0.119 Sum_probs=65.2
Q ss_pred CCCCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhh
Q 022050 40 EGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (303)
Q Consensus 40 ~~~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~ 119 (303)
....++|+|||+|.||.+++..|....+ ..+|.+|+|++++.+++.++ +. ...+
T Consensus 126 ~~~~~~v~iIGaG~~a~~~a~al~~~~~----~~~V~V~~r~~~~a~~la~~-----~~--------------~~~g--- 179 (350)
T 1x7d_A 126 RPNARKMALIGNGAQSEFQALAFHKHLG----IEEIVAYDTDPLATAKLIAN-----LK--------------EYSG--- 179 (350)
T ss_dssp CTTCCEEEEECCSTTHHHHHHHHHHHSC----CCEEEEECSSHHHHHHHHHH-----HT--------------TCTT---
T ss_pred cccCCeEEEECCcHHHHHHHHHHHHhCC----CcEEEEEcCCHHHHHHHHHH-----HH--------------hccC---
Confidence 3456899999999999999988765312 16899999998876542210 00 0000
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEe
Q 022050 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISL 196 (303)
Q Consensus 120 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~ 196 (303)
..+...++++++++++|+|+.|+|+.....++. ..++++ ++.|+.+
T Consensus 180 --------------------------~~~~~~~~~~eav~~aDiVi~aTps~~~~pvl~--~~~l~~---G~~V~~v 225 (350)
T 1x7d_A 180 --------------------------LTIRRASSVAEAVKGVDIITTVTADKAYATIIT--PDMLEP---GMHLNAV 225 (350)
T ss_dssp --------------------------CEEEECSSHHHHHTTCSEEEECCCCSSEEEEEC--GGGCCT---TCEEEEC
T ss_pred --------------------------ceEEEeCCHHHHHhcCCEEEEeccCCCCCceec--HHHcCC---CCEEEEC
Confidence 024456788889999999999999863222222 235566 6666544
No 188
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=97.89 E-value=5.6e-05 Score=69.96 Aligned_cols=94 Identities=13% Similarity=0.097 Sum_probs=63.5
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeE-EEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
++||+|||+|.||..++..+... + +.++ -++++++++++++. .
T Consensus 5 ~~rigiiG~G~ig~~~~~~l~~~-~----~~~~~av~d~~~~~~~~~a-------------------------~------ 48 (329)
T 3evn_A 5 KVRYGVVSTAKVAPRFIEGVRLA-G----NGEVVAVSSRTLESAQAFA-------------------------N------ 48 (329)
T ss_dssp CEEEEEEBCCTTHHHHHHHHHHH-C----SEEEEEEECSCSSTTCC----------------------------------
T ss_pred ceEEEEEechHHHHHHHHHHHhC-C----CcEEEEEEcCCHHHHHHHH-------------------------H------
Confidence 58999999999999999998876 4 1454 47899887654311 0
Q ss_pred cCCcccchhhhhccccccCCCCCCCCe-EEecCHHHHhc--CCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeec
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPL-KVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i-~~t~d~~~a~~--~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~n 198 (303)
++ ++ .+.+|.++.+. +.|+|++++|+....+++.+.. .. +..|+ +-|
T Consensus 49 ---~~--------------------~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al---~a---Gk~Vl-~EK 98 (329)
T 3evn_A 49 ---KY--------------------HLPKAYDKLEDMLADESIDVIYVATINQDHYKVAKAAL---LA---GKHVL-VEK 98 (329)
T ss_dssp ---CC--------------------CCSCEESCHHHHHTCTTCCEEEECSCGGGHHHHHHHHH---HT---TCEEE-EES
T ss_pred ---Hc--------------------CCCcccCCHHHHhcCCCCCEEEECCCcHHHHHHHHHHH---HC---CCeEE-Ecc
Confidence 00 12 25678888876 7899999999987766665543 33 44443 455
Q ss_pred cCcc
Q 022050 199 GVEA 202 (303)
Q Consensus 199 Gi~~ 202 (303)
.+..
T Consensus 99 P~a~ 102 (329)
T 3evn_A 99 PFTL 102 (329)
T ss_dssp SCCS
T ss_pred CCcC
Confidence 5544
No 189
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=97.88 E-value=1.4e-05 Score=76.33 Aligned_cols=92 Identities=23% Similarity=0.247 Sum_probs=65.0
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
-++|+|||.|.||..+|..+..- | .+|..|++..+..+ .
T Consensus 119 gktvGIIGlG~IG~~vA~~l~a~-G-----~~V~~~d~~~~~~~----------------------------~------- 157 (381)
T 3oet_A 119 DRTIGIVGVGNVGSRLQTRLEAL-G-----IRTLLCDPPRAARG----------------------------D------- 157 (381)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECHHHHHTT----------------------------C-------
T ss_pred CCEEEEEeECHHHHHHHHHHHHC-C-----CEEEEECCChHHhc----------------------------c-------
Confidence 47999999999999999999887 8 89999998532110 0
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh-----HHHHH-HHHHHHhhccCCCCEEEEe
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE-----TKEVF-EEISRYWKERITVPVIISL 196 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~-----~~~vl-~~l~~~l~~~~~~~iivs~ 196 (303)
.. ...++++++++||+|++++|... ++.++ ++....+++ ++++|.+
T Consensus 158 ------------------------~~-~~~sl~ell~~aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk~---gailIN~ 209 (381)
T 3oet_A 158 ------------------------EG-DFRTLDELVQEADVLTFHTPLYKDGPYKTLHLADETLIRRLKP---GAILINA 209 (381)
T ss_dssp ------------------------CS-CBCCHHHHHHHCSEEEECCCCCCSSTTCCTTSBCHHHHHHSCT---TEEEEEC
T ss_pred ------------------------Cc-ccCCHHHHHhhCCEEEEcCcCCccccccchhhcCHHHHhcCCC---CcEEEEC
Confidence 00 12467888899999999998542 23333 233344666 7888888
Q ss_pred eccCccc
Q 022050 197 AKGVEAE 203 (303)
Q Consensus 197 ~nGi~~~ 203 (303)
..|=..+
T Consensus 210 aRG~vvd 216 (381)
T 3oet_A 210 CRGPVVD 216 (381)
T ss_dssp SCGGGBC
T ss_pred CCCcccC
Confidence 8775443
No 190
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=97.88 E-value=4.1e-05 Score=71.50 Aligned_cols=79 Identities=18% Similarity=0.323 Sum_probs=55.6
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEE-EEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
++||+|||+|.||..++..+.+..+ .+++ ++++++++++++.+ ..
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~-----~~lvav~d~~~~~~~~~~~-------------------------~~---- 50 (354)
T 3db2_A 5 PVGVAAIGLGRWAYVMADAYTKSEK-----LKLVTCYSRTEDKREKFGK-------------------------RY---- 50 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSS-----EEEEEEECSSHHHHHHHHH-------------------------HH----
T ss_pred cceEEEEccCHHHHHHHHHHHhCCC-----cEEEEEECCCHHHHHHHHH-------------------------Hc----
Confidence 4799999999999999998876412 6644 78998876543110 00
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHh--cCCCEEEEecCchhHHHHHHHH
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAV--WDADIVINGLPSTETKEVFEEI 180 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~--~~aDlVIiaVp~~~~~~vl~~l 180 (303)
++...+|.++++ .+.|+|++++|+....+++.+.
T Consensus 51 -------------------------g~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~a 86 (354)
T 3db2_A 51 -------------------------NCAGDATMEALLAREDVEMVIITVPNDKHAEVIEQC 86 (354)
T ss_dssp -------------------------TCCCCSSHHHHHHCSSCCEEEECSCTTSHHHHHHHH
T ss_pred -------------------------CCCCcCCHHHHhcCCCCCEEEEeCChHHHHHHHHHH
Confidence 122246788877 5699999999998776665543
No 191
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=97.87 E-value=6.4e-06 Score=78.65 Aligned_cols=92 Identities=16% Similarity=0.216 Sum_probs=65.6
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
.-++|+|||.|.||..+|..+... | .+|.+|+++++..+ .+
T Consensus 115 ~g~tvGIIGlG~IG~~vA~~l~~~-G-----~~V~~~d~~~~~~~----------------------------~g----- 155 (380)
T 2o4c_A 115 AERTYGVVGAGQVGGRLVEVLRGL-G-----WKVLVCDPPRQARE----------------------------PD----- 155 (380)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECHHHHHHS----------------------------TT-----
T ss_pred CCCEEEEEeCCHHHHHHHHHHHHC-C-----CEEEEEcCChhhhc----------------------------cC-----
Confidence 348999999999999999999887 8 89999998653110 00
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh-----HHHHH-HHHHHHhhccCCCCEEEE
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE-----TKEVF-EEISRYWKERITVPVIIS 195 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~-----~~~vl-~~l~~~l~~~~~~~iivs 195 (303)
.. ..++++.+++||+|++++|... +..++ ++....+++ ++++|.
T Consensus 156 --------------------------~~-~~~l~ell~~aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk~---gailIN 205 (380)
T 2o4c_A 156 --------------------------GE-FVSLERLLAEADVISLHTPLNRDGEHPTRHLLDEPRLAALRP---GTWLVN 205 (380)
T ss_dssp --------------------------SC-CCCHHHHHHHCSEEEECCCCCSSSSSCCTTSBCHHHHHTSCT---TEEEEE
T ss_pred --------------------------cc-cCCHHHHHHhCCEEEEeccCccccccchhhhcCHHHHhhCCC---CcEEEE
Confidence 00 1357788889999999998653 34444 334455676 788888
Q ss_pred eeccCcc
Q 022050 196 LAKGVEA 202 (303)
Q Consensus 196 ~~nGi~~ 202 (303)
+..|=..
T Consensus 206 ~sRG~vv 212 (380)
T 2o4c_A 206 ASRGAVV 212 (380)
T ss_dssp CSCGGGB
T ss_pred CCCCccc
Confidence 8777433
No 192
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=97.87 E-value=5.1e-05 Score=74.48 Aligned_cols=111 Identities=18% Similarity=0.207 Sum_probs=70.6
Q ss_pred ceEEEECCChHHHH--HHHHHHHhcCCCC-CCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhh
Q 022050 44 LRIVGVGAGAWGSV--FTAMLQDSYGYLR-DKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (303)
Q Consensus 44 ~kI~VIGaG~mG~a--iA~~La~~~G~~~-~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (303)
|||+|||+|+.|.+ +...++.. ..+. ...+|.|+|.++++++.... ..+. ..+..
T Consensus 1 mKI~iIGaGs~~~t~~l~~~~~~~-~~l~~~~~ei~L~Di~~~rl~~~~~-----~~~~-------------~~~~~--- 58 (477)
T 3u95_A 1 MKISIVGAGSVRFALQLVEDIAQT-DELSREDTHIYLMDVHERRLNASYI-----LARK-------------YVEEL--- 58 (477)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTC-TTTCSTTCEEEEECSCHHHHHHHHH-----HHHH-------------HHHHH---
T ss_pred CEEEEECCCchhhHHHHHHHHHhh-HhcCCCCCEEEEECCCHHHHHHHHH-----HHHH-------------HHHHc---
Confidence 79999999998755 33334443 2221 11479999999987653210 0110 00100
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecC-----------------------c-------
Q 022050 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLP-----------------------S------- 170 (303)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp-----------------------~------- 170 (303)
.. ...+..|+|.++|+++||+||+++= .
T Consensus 59 ----~~------------------~~~i~~t~d~~eAl~gAD~Vi~~~g~~~~Rvg~~~~r~~de~~~ip~k~G~~~~~l 116 (477)
T 3u95_A 59 ----NS------------------PVKVVKTESLDEAIEGADFIINTAYPYDPRYHDSGSQRWDEVTKVGEKHGYYRGID 116 (477)
T ss_dssp ----TC------------------CCEEEEESCHHHHHTTCSEEEECCCCCCTTTCSSHHHHHHHHHHHHHHTTCTTCTT
T ss_pred ----CC------------------CeEEEEeCCHHHHhCCCCEEEECcccccccccccccccceeeeccCcccceeeccc
Confidence 00 0257789999999999999999861 1
Q ss_pred -h-------------------hHHHHHHHHHHHhhccCCCCEEEEeeccCcc
Q 022050 171 -T-------------------ETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (303)
Q Consensus 171 -~-------------------~~~~vl~~l~~~l~~~~~~~iivs~~nGi~~ 202 (303)
| .+.++++++..+++ ++.++..+|.+..
T Consensus 117 ~qet~g~gG~~~~lR~~~~i~v~~~i~~~i~~~~P----~A~~in~tNP~~i 164 (477)
T 3u95_A 117 SQELNMVSTYTYVLSSYPDVKLALEIAEKMKKMAP----KAYLMQTANPVFE 164 (477)
T ss_dssp CBTTBCCTTSCSTTTTHHHHHHHHHHHHHHHHHCT----TCEEEECSSCHHH
T ss_pred ccccCCccchhHHHhhhhhHHHHHHHHHHHHhhCC----CeEEEEecChHHH
Confidence 0 23567777777765 6899999988764
No 193
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=97.87 E-value=6.3e-05 Score=69.17 Aligned_cols=39 Identities=21% Similarity=0.284 Sum_probs=30.5
Q ss_pred CceEEEECCChHHHH-HHHHHHHhcCCCCCCeeEE-EEecCCchhh
Q 022050 43 PLRIVGVGAGAWGSV-FTAMLQDSYGYLRDKVLIR-IWRRPGRSVD 86 (303)
Q Consensus 43 ~~kI~VIGaG~mG~a-iA~~La~~~G~~~~~~~V~-l~~r~~~~~~ 86 (303)
++||+|||+|.||.. ++..+.+..+ .+++ ++++++++.+
T Consensus 5 ~~~vgiiG~G~~g~~~~~~~l~~~~~-----~~lvav~d~~~~~~~ 45 (319)
T 1tlt_A 5 KLRIGVVGLGGIAQKAWLPVLAAASD-----WTLQGAWSPTRAKAL 45 (319)
T ss_dssp CEEEEEECCSTHHHHTHHHHHHSCSS-----EEEEEEECSSCTTHH
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCC-----eEEEEEECCCHHHHH
Confidence 489999999999996 8888865313 6665 8999987654
No 194
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=97.86 E-value=0.00011 Score=69.18 Aligned_cols=131 Identities=17% Similarity=0.143 Sum_probs=70.7
Q ss_pred eeccCCchhhhhhHHHHHhccCCCCCceEEEECC-ChHHHHHHHHHHHhcCCCCCC--eeEEEEecCCchhhhhhhhhHH
Q 022050 18 IHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDK--VLIRIWRRPGRSVDRATAEHLF 94 (303)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~--~~V~l~~r~~~~~~~~~~~~l~ 94 (303)
.||.-|+++.+- |.+ ......||+|+|| |.+|..++..|+.. ..+.++ .++.|+|.++.. +.+ +++.
T Consensus 5 ~~~~~~~~~~~~---~~~---~s~~~vKVaViGAaG~IG~~la~~la~~-~l~~~~~~~eL~L~Di~~~~-~~~--~Gva 74 (345)
T 4h7p_A 5 HHHHMGTLEAQT---QGP---GSMSAVKVAVTGAAGQIGYALVPLIARG-ALLGPTTPVELRLLDIEPAL-KAL--AGVE 74 (345)
T ss_dssp -----------------------CCCEEEEEESTTSHHHHHHHHHHHHT-TTTCTTCCEEEEEECCGGGH-HHH--HHHH
T ss_pred cccccccccccc---cCC---CCCCCCEEEEECcCcHHHHHHHHHHHhc-cccCCCCccEEEEECCCCcc-ccc--hhhh
Confidence 355667776551 222 2223369999997 99999999999986 433211 378999987642 111 1110
Q ss_pred HHHhhhhhHHHHhhhhcccchhhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEec--Cch-
Q 022050 95 EVINSREDVLRRLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGL--PST- 171 (303)
Q Consensus 95 ~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaV--p~~- 171 (303)
--+ .+. .++ ....+..+++..+++++||+||++- |.+
T Consensus 75 ~DL-----------------~~~-------~~~----------------~~~~~~~~~~~~~a~~~advVvi~aG~prkp 114 (345)
T 4h7p_A 75 AEL-----------------EDC-------AFP----------------LLDKVVVTADPRVAFDGVAIAIMCGAFPRKA 114 (345)
T ss_dssp HHH-----------------HHT-------TCT----------------TEEEEEEESCHHHHTTTCSEEEECCCCCCCT
T ss_pred hhh-----------------hhc-------Ccc----------------CCCcEEEcCChHHHhCCCCEEEECCCCCCCC
Confidence 001 110 000 0024667788889999999999964 321
Q ss_pred -------------hHHHHHHHHHHHhhccCCCCEEEEeeccCc
Q 022050 172 -------------ETKEVFEEISRYWKERITVPVIISLAKGVE 201 (303)
Q Consensus 172 -------------~~~~vl~~l~~~l~~~~~~~iivs~~nGi~ 201 (303)
.++++.+.|.++..+ +..|+..+|.+.
T Consensus 115 GmtR~DLl~~Na~I~~~~~~~i~~~a~~---~~~vlvvsNPvd 154 (345)
T 4h7p_A 115 GMERKDLLEMNARIFKEQGEAIAAVAAS---DCRVVVVGNPAN 154 (345)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHSCT---TCEEEECSSSHH
T ss_pred CCCHHHHHHHhHHHHHHHHHHHHhhccC---ceEEEEeCCCcc
Confidence 355566666666655 677777777644
No 195
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=97.85 E-value=2.6e-05 Score=63.99 Aligned_cols=86 Identities=19% Similarity=0.144 Sum_probs=62.0
Q ss_pred hHHHHHhccCCCCCceEEEECC----ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHH
Q 022050 30 DELRRLMGKAEGDPLRIVGVGA----GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLR 105 (303)
Q Consensus 30 ~~~~~~~~~~~~~~~kI~VIGa----G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~ 105 (303)
+++++++ ..+.+|+|||+ |.+|..++..|.+. | ++ +|..++.+...
T Consensus 4 ~~l~~ll----~~p~~vaVvGas~~~g~~G~~~~~~l~~~-G-----~~--v~~vnp~~~~~------------------ 53 (140)
T 1iuk_A 4 QELRAYL----SQAKTIAVLGAHKDPSRPAHYVPRYLREQ-G-----YR--VLPVNPRFQGE------------------ 53 (140)
T ss_dssp HHHHHHH----HHCCEEEEETCCSSTTSHHHHHHHHHHHT-T-----CE--EEEECGGGTTS------------------
T ss_pred HHHHHHH----cCCCEEEEECCCCCCCChHHHHHHHHHHC-C-----CE--EEEeCCCcccC------------------
Confidence 4566777 23578999999 89999999999988 8 65 67777652110
Q ss_pred HhhhhcccchhhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHH
Q 022050 106 RLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRY 183 (303)
Q Consensus 106 ~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~ 183 (303)
... .+.+..+++++.+..|++++++|+....++++++...
T Consensus 54 -------~i~-------------------------------G~~~~~sl~el~~~vDlavi~vp~~~~~~v~~~~~~~ 93 (140)
T 1iuk_A 54 -------ELF-------------------------------GEEAVASLLDLKEPVDILDVFRPPSALMDHLPEVLAL 93 (140)
T ss_dssp -------EET-------------------------------TEECBSSGGGCCSCCSEEEECSCHHHHTTTHHHHHHH
T ss_pred -------cCC-------------------------------CEEecCCHHHCCCCCCEEEEEeCHHHHHHHHHHHHHc
Confidence 011 2334455666556799999999999999999887653
No 196
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.83 E-value=4.4e-05 Score=62.66 Aligned_cols=33 Identities=9% Similarity=0.018 Sum_probs=30.9
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~ 82 (303)
++|.|+|+|.+|..++..|.+. | ++|+++++++
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~-g-----~~V~vid~~~ 36 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQR-G-----QNVTVISNLP 36 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-T-----CCEEEEECCC
T ss_pred CcEEEECCCHHHHHHHHHHHHC-C-----CCEEEEECCC
Confidence 6899999999999999999998 8 8999999984
No 197
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=97.83 E-value=6.7e-05 Score=69.16 Aligned_cols=77 Identities=17% Similarity=0.116 Sum_probs=53.9
Q ss_pred ceEEEECCChHHHHH-HHHHHHhcCCCCCCeeE-EEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 44 LRIVGVGAGAWGSVF-TAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 44 ~kI~VIGaG~mG~ai-A~~La~~~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
+||+|||+|.||..+ +..+.+. + .++ .++++++++.+++.+ ..
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~-~-----~~~vav~d~~~~~~~~~~~-------------------------~~---- 45 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRAT-G-----GEVVSMMSTSAERGAAYAT-------------------------EN---- 45 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHT-T-----CEEEEEECSCHHHHHHHHH-------------------------HT----
T ss_pred CeEEEEcccHHHHHhhhHHhhcC-C-----CeEEEEECCCHHHHHHHHH-------------------------Hc----
Confidence 589999999999998 7777765 6 665 478998875542110 00
Q ss_pred cCCcccchhhhhccccccCCCCCCCCe-EEecCHHHHhc--CCCEEEEecCchhHHHHHHHH
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPL-KVVTNLQEAVW--DADIVINGLPSTETKEVFEEI 180 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i-~~t~d~~~a~~--~aDlVIiaVp~~~~~~vl~~l 180 (303)
++ .+.+|.++.++ ++|+|++++|+....+++.+.
T Consensus 46 -------------------------g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~a 82 (332)
T 2glx_A 46 -------------------------GIGKSVTSVEELVGDPDVDAVYVSTTNELHREQTLAA 82 (332)
T ss_dssp -------------------------TCSCCBSCHHHHHTCTTCCEEEECSCGGGHHHHHHHH
T ss_pred -------------------------CCCcccCCHHHHhcCCCCCEEEEeCChhHhHHHHHHH
Confidence 01 13467777765 599999999998776666553
No 198
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.81 E-value=0.00012 Score=66.74 Aligned_cols=125 Identities=11% Similarity=0.083 Sum_probs=77.9
Q ss_pred CceEEEEC-CChHHHHHHHHHHHhcCCCCCCeeEEE-EecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhh
Q 022050 43 PLRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRI-WRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (303)
Q Consensus 43 ~~kI~VIG-aG~mG~aiA~~La~~~G~~~~~~~V~l-~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (303)
++||+|+| +|.||..++..+.+..+ .++.. +++++....- .....+.
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~-----~eLv~~~d~~~~~~~G------------------------~d~gel~-- 55 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPD-----ATLVGALDRTGSPQLG------------------------QDAGAFL-- 55 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTT-----EEEEEEBCCTTCTTTT------------------------SBTTTTT--
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCC-----CEEEEEEEecCccccc------------------------ccHHHHh--
Confidence 58999999 79999999999887512 55543 5776432110 0000000
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeeccC
Q 022050 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (303)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nGi 200 (303)
.+ ...+.+++|+++.+.++|+||.++++....+.++... .. +..+|+.+.|+
T Consensus 56 ----g~------------------~~gv~v~~dl~~ll~~~DVVIDfT~p~a~~~~~~~al---~~---G~~vVigTTG~ 107 (272)
T 4f3y_A 56 ----GK------------------QTGVALTDDIERVCAEADYLIDFTLPEGTLVHLDAAL---RH---DVKLVIGTTGF 107 (272)
T ss_dssp ----TC------------------CCSCBCBCCHHHHHHHCSEEEECSCHHHHHHHHHHHH---HH---TCEEEECCCCC
T ss_pred ----CC------------------CCCceecCCHHHHhcCCCEEEEcCCHHHHHHHHHHHH---Hc---CCCEEEECCCC
Confidence 00 0135567889888889999999999887766665543 33 56677777787
Q ss_pred ccccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHH
Q 022050 201 EAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASE 239 (303)
Q Consensus 201 ~~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~e 239 (303)
+.+. .+.|.+... ...++..|||..-
T Consensus 108 s~~~---------~~~L~~aa~----~~~vv~a~N~s~G 133 (272)
T 4f3y_A 108 SEPQ---------KAQLRAAGE----KIALVFSANMSVG 133 (272)
T ss_dssp CHHH---------HHHHHHHTT----TSEEEECSCCCHH
T ss_pred CHHH---------HHHHHHHhc----cCCEEEECCCCHH
Confidence 6531 123444432 1346889998653
No 199
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=97.80 E-value=0.00013 Score=68.20 Aligned_cols=94 Identities=17% Similarity=0.115 Sum_probs=62.8
Q ss_pred CceEEEECCChHHH-HHHHHHHHhcCCCCCCeeEE-EEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhh
Q 022050 43 PLRIVGVGAGAWGS-VFTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (303)
Q Consensus 43 ~~kI~VIGaG~mG~-aiA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (303)
++||+|||+|.||. .++..|....+ .+|+ ++++++++.+++. ...
T Consensus 27 ~~rigiIG~G~~g~~~~~~~l~~~~~-----~~l~av~d~~~~~~~~~a-------------------------~~~--- 73 (350)
T 3rc1_A 27 PIRVGVIGCADIAWRRALPALEAEPL-----TEVTAIASRRWDRAKRFT-------------------------ERF--- 73 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCTT-----EEEEEEEESSHHHHHHHH-------------------------HHH---
T ss_pred ceEEEEEcCcHHHHHHHHHHHHhCCC-----eEEEEEEcCCHHHHHHHH-------------------------HHc---
Confidence 48999999999998 78888876513 6654 7899876554311 000
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeec
Q 022050 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (303)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~--~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~n 198 (303)
++...+|+++.++ +.|+|++|+|+....+++.+.. .. +..|+ +-|
T Consensus 74 --------------------------g~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al---~a---Gk~Vl-~EK 120 (350)
T 3rc1_A 74 --------------------------GGEPVEGYPALLERDDVDAVYVPLPAVLHAEWIDRAL---RA---GKHVL-AEK 120 (350)
T ss_dssp --------------------------CSEEEESHHHHHTCTTCSEEEECCCGGGHHHHHHHHH---HT---TCEEE-EES
T ss_pred --------------------------CCCCcCCHHHHhcCCCCCEEEECCCcHHHHHHHHHHH---HC---CCcEE-EeC
Confidence 2334478888775 5899999999998776666543 33 44433 555
Q ss_pred cCcc
Q 022050 199 GVEA 202 (303)
Q Consensus 199 Gi~~ 202 (303)
.+..
T Consensus 121 P~a~ 124 (350)
T 3rc1_A 121 PLTT 124 (350)
T ss_dssp SSCS
T ss_pred CCCC
Confidence 5544
No 200
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=97.80 E-value=5.8e-05 Score=69.35 Aligned_cols=78 Identities=18% Similarity=0.330 Sum_probs=56.4
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCee-EEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~-V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (303)
.++||+|||+|.||..++..|.+..+ .+ |.++++++++.++ +..
T Consensus 9 ~~~~igiIG~G~~g~~~~~~l~~~~~-----~~~v~v~d~~~~~~~~--------------------------~~~---- 53 (315)
T 3c1a_A 9 SPVRLALIGAGRWGKNYIRTIAGLPG-----AALVRLASSNPDNLAL--------------------------VPP---- 53 (315)
T ss_dssp CCEEEEEEECTTTTTTHHHHHHHCTT-----EEEEEEEESCHHHHTT--------------------------CCT----
T ss_pred CcceEEEECCcHHHHHHHHHHHhCCC-----cEEEEEEeCCHHHHHH--------------------------HHh----
Confidence 45899999999999999999987513 55 4588998764431 000
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHH
Q 022050 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEI 180 (303)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~--~aDlVIiaVp~~~~~~vl~~l 180 (303)
.+...+|.+++++ ++|+|++++|+....+++.+.
T Consensus 54 --------------------------~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~a 89 (315)
T 3c1a_A 54 --------------------------GCVIESDWRSVVSAPEVEAVIIATPPATHAEITLAA 89 (315)
T ss_dssp --------------------------TCEEESSTHHHHTCTTCCEEEEESCGGGHHHHHHHH
T ss_pred --------------------------hCcccCCHHHHhhCCCCCEEEEeCChHHHHHHHHHH
Confidence 1334567777774 799999999998877766654
No 201
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=97.79 E-value=2.3e-05 Score=74.27 Aligned_cols=43 Identities=21% Similarity=0.349 Sum_probs=33.8
Q ss_pred cCCCCCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 38 KAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 38 ~~~~~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
+.+.+.+||+|+|+|.||..++..|++. ++|++++|+++++++
T Consensus 11 ~~~~~~~~v~IiGaG~iG~~ia~~L~~~-------~~V~V~~R~~~~a~~ 53 (365)
T 2z2v_A 11 HIEGRHMKVLILGAGNIGRAIAWDLKDE-------FDVYIGDVNNENLEK 53 (365)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHTTT-------SEEEEEESCHHHHHH
T ss_pred cccCCCCeEEEEcCCHHHHHHHHHHHcC-------CeEEEEECCHHHHHH
Confidence 3455679999999999999999999876 589999999887654
No 202
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=97.77 E-value=4.9e-05 Score=70.11 Aligned_cols=39 Identities=15% Similarity=0.293 Sum_probs=30.5
Q ss_pred CceEEEECCChHHH-HHHHHHHHhcCCCCCCeeEEEEecCCchhh
Q 022050 43 PLRIVGVGAGAWGS-VFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (303)
Q Consensus 43 ~~kI~VIGaG~mG~-aiA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (303)
++||+|||+|.||. .++..|.+..+ .+++++++++++.+
T Consensus 2 ~~~igiIG~G~ig~~~~~~~l~~~~~-----~~l~v~d~~~~~~~ 41 (323)
T 1xea_A 2 SLKIAMIGLGDIAQKAYLPVLAQWPD-----IELVLCTRNPKVLG 41 (323)
T ss_dssp CEEEEEECCCHHHHHTHHHHHTTSTT-----EEEEEECSCHHHHH
T ss_pred CcEEEEECCCHHHHHHHHHHHHhCCC-----ceEEEEeCCHHHHH
Confidence 47999999999998 58888866413 67779999887654
No 203
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=97.77 E-value=0.00011 Score=60.49 Aligned_cols=83 Identities=14% Similarity=0.123 Sum_probs=59.5
Q ss_pred HHHHHhccCCCCCceEEEECC----ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHH
Q 022050 31 ELRRLMGKAEGDPLRIVGVGA----GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRR 106 (303)
Q Consensus 31 ~~~~~~~~~~~~~~kI~VIGa----G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~ 106 (303)
.|++++. .+.+|+|||+ |.+|..++..|.+. | ++ +|+.++.. +.
T Consensus 14 ~l~~ll~----~p~~iaVVGas~~~g~~G~~~~~~l~~~-G-----~~--v~~Vnp~~-~~------------------- 61 (144)
T 2d59_A 14 DIREILT----RYKKIALVGASPKPERDANIVMKYLLEH-G-----YD--VYPVNPKY-EE------------------- 61 (144)
T ss_dssp HHHHHHH----HCCEEEEETCCSCTTSHHHHHHHHHHHT-T-----CE--EEEECTTC-SE-------------------
T ss_pred HHHHHHc----CCCEEEEEccCCCCCchHHHHHHHHHHC-C-----CE--EEEECCCC-Ce-------------------
Confidence 4556662 1468999999 79999999999988 8 66 56666642 10
Q ss_pred hhhhcccchhhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHH
Q 022050 107 LIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRY 183 (303)
Q Consensus 107 ~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~ 183 (303)
.. .+.+..++++..+..|+++++||+....++++++...
T Consensus 62 -------i~-------------------------------G~~~y~sl~~l~~~vDlvvi~vp~~~~~~vv~~~~~~ 100 (144)
T 2d59_A 62 -------VL-------------------------------GRKCYPSVLDIPDKIEVVDLFVKPKLTMEYVEQAIKK 100 (144)
T ss_dssp -------ET-------------------------------TEECBSSGGGCSSCCSEEEECSCHHHHHHHHHHHHHH
T ss_pred -------EC-------------------------------CeeccCCHHHcCCCCCEEEEEeCHHHHHHHHHHHHHc
Confidence 11 2333445666556799999999999999999887653
No 204
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=97.76 E-value=0.00014 Score=66.80 Aligned_cols=141 Identities=15% Similarity=0.149 Sum_probs=77.4
Q ss_pred eccCCchhhhhhHHHHHhccCCCCCceEEEEC-CChHHHHHHHHHHHhcCCCCCCeeEE-EEecCCchhhhhhhhhHHHH
Q 022050 19 HHTNGSLEERLDELRRLMGKAEGDPLRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEV 96 (303)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~kI~VIG-aG~mG~aiA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~ 96 (303)
||.-|+||.. +.| . .++||+|+| +|.||..++..+.+..+ .++. ++++++....-
T Consensus 6 ~~~~~~~~~~-----~~m--~--~~irV~V~Ga~GrMGr~i~~~v~~~~~-----~eLvg~vd~~~~~~~G--------- 62 (288)
T 3ijp_A 6 HHHMGTLEAQ-----TQG--P--GSMRLTVVGANGRMGRELITAIQRRKD-----VELCAVLVRKGSSFVD--------- 62 (288)
T ss_dssp ------------------------CEEEEESSTTSHHHHHHHHHHHTCSS-----EEEEEEBCCTTCTTTT---------
T ss_pred ccccchhhhh-----hhc--c--CCeEEEEECCCCHHHHHHHHHHHhCCC-----CEEEEEEecCCccccc---------
Confidence 5667777643 122 1 458999999 89999999999886512 5543 45765432100
Q ss_pred HhhhhhHHHHhhhhcccchhhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHH
Q 022050 97 INSREDVLRRLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEV 176 (303)
Q Consensus 97 i~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~v 176 (303)
.. ...+.++ . ...+.+++|+++.+.++|+||-++++....+.
T Consensus 63 -~d-----------~gel~G~---------~-----------------~~gv~v~~dl~~ll~~aDVvIDFT~p~a~~~~ 104 (288)
T 3ijp_A 63 -KD-----------ASILIGS---------D-----------------FLGVRITDDPESAFSNTEGILDFSQPQASVLY 104 (288)
T ss_dssp -SB-----------GGGGTTC---------S-----------------CCSCBCBSCHHHHTTSCSEEEECSCHHHHHHH
T ss_pred -cc-----------hHHhhcc---------C-----------------cCCceeeCCHHHHhcCCCEEEEcCCHHHHHHH
Confidence 00 0001110 0 02466778999988899999999988766555
Q ss_pred HHHHHHHhhccCCCCEEEEeeccCccccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHH
Q 022050 177 FEEISRYWKERITVPVIISLAKGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASE 239 (303)
Q Consensus 177 l~~l~~~l~~~~~~~iivs~~nGi~~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~e 239 (303)
++.. +.. +..+|+.+.|+..+. .+.|.+.... ..++..|||..-
T Consensus 105 ~~~~---l~~---Gv~vViGTTG~~~e~---------~~~L~~aa~~----~~~~~a~N~SiG 148 (288)
T 3ijp_A 105 ANYA---AQK---SLIHIIGTTGFSKTE---------EAQIADFAKY----TTIVKSGNMSLG 148 (288)
T ss_dssp HHHH---HHH---TCEEEECCCCCCHHH---------HHHHHHHHTT----SEEEECSCCCHH
T ss_pred HHHH---HHc---CCCEEEECCCCCHHH---------HHHHHHHhCc----CCEEEECCCcHH
Confidence 5443 333 566777777875431 1234444421 346889999653
No 205
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=97.74 E-value=0.00014 Score=67.80 Aligned_cols=110 Identities=15% Similarity=0.166 Sum_probs=69.5
Q ss_pred CCceEEEECC-ChHHHHHHHHHHHhcCCCC--CCeeEEEEecC----CchhhhhhhhhHHHHHhhhhhHHHHhhhhcccc
Q 022050 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLR--DKVLIRIWRRP----GRSVDRATAEHLFEVINSREDVLRRLIRRCAYL 114 (303)
Q Consensus 42 ~~~kI~VIGa-G~mG~aiA~~La~~~G~~~--~~~~V~l~~r~----~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l 114 (303)
.+|||+|+|+ |.+|+.++..|+.. |.+. ...+|.++|++ +++++.. ..-+... ..
T Consensus 4 ~~~KI~ViGaaG~VG~~l~~~L~~~-~~~~~~~~~ev~l~Di~~~~~~~~~~g~-----~~dl~~~------------~~ 65 (329)
T 1b8p_A 4 TPMRVAVTGAAGQICYSLLFRIANG-DMLGKDQPVILQLLEIPNEKAQKALQGV-----MMEIDDC------------AF 65 (329)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTT-TTTCTTCCEEEEEECCSCHHHHHHHHHH-----HHHHHTT------------TC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhC-CCcCCCCCCEEEEEcCCCccccccchhh-----HHHHhhh------------cc
Confidence 4589999998 99999999999987 7321 01379999998 4333210 0001000 00
Q ss_pred hhhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecC--c--------------hhHHHHHH
Q 022050 115 KYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLP--S--------------TETKEVFE 178 (303)
Q Consensus 115 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp--~--------------~~~~~vl~ 178 (303)
+ + ...+..+++..+++++||+||++.. . ..+.++++
T Consensus 66 ~----------~------------------~~~i~~~~~~~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~ 117 (329)
T 1b8p_A 66 P----------L------------------LAGMTAHADPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGK 117 (329)
T ss_dssp T----------T------------------EEEEEEESSHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred c----------c------------------cCcEEEecCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 0 0 0246677888899999999999762 1 12456666
Q ss_pred HHHHHhhccCCCCEEEEeeccC
Q 022050 179 EISRYWKERITVPVIISLAKGV 200 (303)
Q Consensus 179 ~l~~~l~~~~~~~iivs~~nGi 200 (303)
.+..+..+ ++.++..+|.+
T Consensus 118 ~i~~~~~p---~a~ii~~SNPv 136 (329)
T 1b8p_A 118 AIDAVASR---NIKVLVVGNPA 136 (329)
T ss_dssp HHHHHSCT---TCEEEECSSSH
T ss_pred HHHHhcCC---CeEEEEccCch
Confidence 66666423 56777777754
No 206
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=97.73 E-value=6.1e-05 Score=67.89 Aligned_cols=118 Identities=16% Similarity=0.100 Sum_probs=75.2
Q ss_pred eEEEECCChHHHHHHHHHHHhcCCCCCCe-eEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhcC
Q 022050 45 RIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (303)
Q Consensus 45 kI~VIGaG~mG~aiA~~La~~~G~~~~~~-~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 123 (303)
||+|||+|.||.+++..|++. | . +|++++|++++.+++. .
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~-G-----~~~I~v~nR~~~ka~~la-------------------------~-------- 150 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQM-G-----VKDIWVVNRTIERAKALD-------------------------F-------- 150 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-T-----CCCEEEEESCHHHHHTCC-------------------------S--------
T ss_pred eEEEECcHHHHHHHHHHHHHc-C-----CCEEEEEeCCHHHHHHHH-------------------------H--------
Confidence 899999999999999999998 8 5 8999999987654311 0
Q ss_pred CcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHH--HHHHHHHHhhccCCCCEEEEeeccCc
Q 022050 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKE--VFEEISRYWKERITVPVIISLAKGVE 201 (303)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~--vl~~l~~~l~~~~~~~iivs~~nGi~ 201 (303)
.+ ......++.++++++|+||.++|.....+ .+. ...+++ +++++++.-+
T Consensus 151 -~~--------------------~~~~~~~~~~~~~~aDiVInatp~gm~p~~~~i~--~~~l~~---~~~V~Divy~-- 202 (253)
T 3u62_A 151 -PV--------------------KIFSLDQLDEVVKKAKSLFNTTSVGMKGEELPVS--DDSLKN---LSLVYDVIYF-- 202 (253)
T ss_dssp -SC--------------------EEEEGGGHHHHHHTCSEEEECSSTTTTSCCCSCC--HHHHTT---CSEEEECSSS--
T ss_pred -Hc--------------------ccCCHHHHHhhhcCCCEEEECCCCCCCCCCCCCC--HHHhCc---CCEEEEeeCC--
Confidence 00 01122456667889999999998642211 111 123455 6888988877
Q ss_pred cccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHHHhccC
Q 022050 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKE 244 (303)
Q Consensus 202 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~ev~~g~ 244 (303)
.. +++++...... + +..|++.--+.++.
T Consensus 203 ~T-----------~ll~~A~~~G~-~---~~~~Gl~MLv~Qa~ 230 (253)
T 3u62_A 203 DT-----------PLVVKARKLGV-K---HIIKGNLMFYYQAM 230 (253)
T ss_dssp CC-----------HHHHHHHHHTC-S---EEECTHHHHHHHHH
T ss_pred Cc-----------HHHHHHHHCCC-c---EEECCHHHHHHHHH
Confidence 22 33444331111 1 25677777777664
No 207
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=97.72 E-value=0.00014 Score=70.30 Aligned_cols=120 Identities=27% Similarity=0.356 Sum_probs=82.7
Q ss_pred CchhhhhhHHH--HHhccCC-------CCCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhH
Q 022050 23 GSLEERLDELR--RLMGKAE-------GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHL 93 (303)
Q Consensus 23 ~~~~~~~~~~~--~~~~~~~-------~~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l 93 (303)
-++++.|.++. |.|...+ -.-+||+|||.|+-|.+=|.-|-.+ | .+|++--|.....+.-
T Consensus 8 l~~~~~~~~~~~c~~m~~~eF~~~~~~lkgK~IaVIGyGsQG~AqAlNLRDS-G-----v~V~Vglr~~s~~e~~----- 76 (491)
T 3ulk_A 8 LNLRQQLAQLGKCRFMGRDEFADGASYLQGKKVVIVGCGAQGLNQGLNMRDS-G-----LDISYALRKEAIAEKR----- 76 (491)
T ss_dssp SCHHHHHHHHTCCEECCGGGGTTTTGGGTTSEEEEESCSHHHHHHHHHHHHT-T-----CEEEEEECHHHHHTTC-----
T ss_pred ccHHHHHHHhccceeccHHHhcchhHHHcCCEEEEeCCChHhHHHHhHHHhc-C-----CcEEEEeCCCCccccc-----
Confidence 35688888886 3344332 1138999999999999999999999 9 8988877643211100
Q ss_pred HHHHhhhhhHHHHhhhhcccchhhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhH
Q 022050 94 FEVINSREDVLRRLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTET 173 (303)
Q Consensus 94 ~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~ 173 (303)
.+ ..+.. .+ .+++. +..+|++.||+|++-+|...-
T Consensus 77 ----~S-------------~~~A~---------------~~------------Gf~v~-~~~eA~~~ADvV~~L~PD~~q 111 (491)
T 3ulk_A 77 ----AS-------------WRKAT---------------EN------------GFKVG-TYEELIPQADLVINLTPDKQH 111 (491)
T ss_dssp ----HH-------------HHHHH---------------HT------------TCEEE-EHHHHGGGCSEEEECSCGGGH
T ss_pred ----ch-------------HHHHH---------------HC------------CCEec-CHHHHHHhCCEEEEeCChhhH
Confidence 00 00000 11 23333 477899999999999999999
Q ss_pred HHHHHHHHHHhhccCCCCEEEEeeccCcc
Q 022050 174 KEVFEEISRYWKERITVPVIISLAKGVEA 202 (303)
Q Consensus 174 ~~vl~~l~~~l~~~~~~~iivs~~nGi~~ 202 (303)
.+++++|.|++++ ++.+ ..+-|+..
T Consensus 112 ~~vy~~I~p~lk~---G~~L-~faHGFnI 136 (491)
T 3ulk_A 112 SDVVRTVQPLMKD---GAAL-GYSHGFNI 136 (491)
T ss_dssp HHHHHHHGGGSCT---TCEE-EESSCHHH
T ss_pred HHHHHHHHhhCCC---CCEE-EecCcccc
Confidence 9999999999998 6654 46666643
No 208
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=97.71 E-value=0.00012 Score=69.67 Aligned_cols=118 Identities=17% Similarity=0.156 Sum_probs=62.3
Q ss_pred eccCCc-hhhhhhHHHHHhccCCCCCceEEEECCChHHHHHHHHHHHhcCC----CCCCeeE-EEEecCCchhhhhhhhh
Q 022050 19 HHTNGS-LEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGY----LRDKVLI-RIWRRPGRSVDRATAEH 92 (303)
Q Consensus 19 ~~~~~~-~~~~~~~~~~~~~~~~~~~~kI~VIGaG~mG~aiA~~La~~~G~----~~~~~~V-~l~~r~~~~~~~~~~~~ 92 (303)
||++|. |.+-+-.|.. | + .++||+|||+|.||...+..+.+. +. +.++.+| -++|+++++++++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~-M--s--~klrvgiIG~G~ig~~h~~~~~~~-~~~~~~~~~~~elvav~d~~~~~a~~~a~-- 77 (412)
T 4gqa_A 6 HHSSGVDLGTENLYFQS-M--S--ARLNIGLIGSGFMGQAHADAYRRA-AMFYPDLPKRPHLYALADQDQAMAERHAA-- 77 (412)
T ss_dssp ------------------------CEEEEEEECCSHHHHHHHHHHHHH-HHHCTTSSSEEEEEEEECSSHHHHHHHHH--
T ss_pred ccccccccccccCcccc-c--c--ccceEEEEcCcHHHHHHHHHHHhc-cccccccCCCeEEEEEEcCCHHHHHHHHH--
Confidence 678887 5555544433 2 2 348999999999999988888764 21 0111344 467888876543211
Q ss_pred HHHHHhhhhhHHHHhhhhcccchhhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCc
Q 022050 93 LFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPS 170 (303)
Q Consensus 93 l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~--~aDlVIiaVp~ 170 (303)
.+ ...++.+|.++.++ +.|+|++|+|+
T Consensus 78 -----------------------~~----------------------------~~~~~y~d~~~ll~~~~vD~V~I~tp~ 106 (412)
T 4gqa_A 78 -----------------------KL----------------------------GAEKAYGDWRELVNDPQVDVVDITSPN 106 (412)
T ss_dssp -----------------------HH----------------------------TCSEEESSHHHHHHCTTCCEEEECSCG
T ss_pred -----------------------Hc----------------------------CCCeEECCHHHHhcCCCCCEEEECCCc
Confidence 00 01245678888764 57999999999
Q ss_pred hhHHHHHHHHHHHhhccCCCCEEEEeeccCcc
Q 022050 171 TETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (303)
Q Consensus 171 ~~~~~vl~~l~~~l~~~~~~~iivs~~nGi~~ 202 (303)
..-.++..+... . +..| -+-|.+..
T Consensus 107 ~~H~~~~~~al~---a---GkhV-l~EKP~a~ 131 (412)
T 4gqa_A 107 HLHYTMAMAAIA---A---GKHV-YCEKPLAV 131 (412)
T ss_dssp GGHHHHHHHHHH---T---TCEE-EEESCSCS
T ss_pred HHHHHHHHHHHH---c---CCCe-EeecCCcC
Confidence 876665554332 2 3333 35565554
No 209
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=97.70 E-value=0.00012 Score=68.29 Aligned_cols=38 Identities=11% Similarity=0.318 Sum_probs=31.5
Q ss_pred CCceEEEEC-CChHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 022050 42 DPLRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (303)
Q Consensus 42 ~~~kI~VIG-aG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~ 83 (303)
.+|||+|+| +|.+|..++..|+.. |.. ++|.++|++++
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~-g~~---~ev~l~Di~~~ 45 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMN-PLV---SVLHLYDVVNA 45 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHC-TTE---EEEEEEESSSH
T ss_pred CCCEEEEECCCChHHHHHHHHHHhC-CCC---CEEEEEeCCCc
Confidence 458999999 799999999999886 521 57999998875
No 210
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=97.70 E-value=0.00012 Score=67.70 Aligned_cols=96 Identities=17% Similarity=0.105 Sum_probs=62.0
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCee-EEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~-V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
++||+|||+|.||..++..+... +. .+.+ |-++++++++.+++.+ ..
T Consensus 2 ~~rigiiG~G~ig~~~~~~l~~~-~~--~~~~l~av~d~~~~~a~~~a~-------------------------~~---- 49 (334)
T 3ohs_X 2 ALRWGIVSVGLISSDFTAVLQTL-PR--SEHQVVAVAARDLSRAKEFAQ-------------------------KH---- 49 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTS-CT--TTEEEEEEECSSHHHHHHHHH-------------------------HH----
T ss_pred ccEEEEECchHHHHHHHHHHHhC-CC--CCeEEEEEEcCCHHHHHHHHH-------------------------Hc----
Confidence 47999999999999999888754 30 0133 4578888776543110 00
Q ss_pred cCCcccchhhhhccccccCCCCCCCCe-EEecCHHHHhc--CCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeec
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPL-KVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i-~~t~d~~~a~~--~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~n 198 (303)
++ ++.+|.++.+. +.|+|++++|+....++..+.. .. +..|+ +-|
T Consensus 50 -------------------------~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al---~~---GkhVl-~EK 97 (334)
T 3ohs_X 50 -------------------------DIPKAYGSYEELAKDPNVEVAYVGTQHPQHKAAVMLCL---AA---GKAVL-CEK 97 (334)
T ss_dssp -------------------------TCSCEESSHHHHHHCTTCCEEEECCCGGGHHHHHHHHH---HT---TCEEE-EES
T ss_pred -------------------------CCCcccCCHHHHhcCCCCCEEEECCCcHHHHHHHHHHH---hc---CCEEE-EEC
Confidence 11 24578888775 6899999999997766665543 33 44433 556
Q ss_pred cCcc
Q 022050 199 GVEA 202 (303)
Q Consensus 199 Gi~~ 202 (303)
.+..
T Consensus 98 P~a~ 101 (334)
T 3ohs_X 98 PMGV 101 (334)
T ss_dssp SSSS
T ss_pred CCCC
Confidence 5544
No 211
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=97.69 E-value=0.00029 Score=65.40 Aligned_cols=97 Identities=14% Similarity=0.091 Sum_probs=62.3
Q ss_pred CCceEEEECCChHHHH-HHHHHHHhcCCCCCCeeEE-EEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhh
Q 022050 42 DPLRIVGVGAGAWGSV-FTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~a-iA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~ 119 (303)
.|+||+|||+|.||.. ++..+... . +.+|+ ++|+++++++++.+ .+
T Consensus 22 ~mirigiIG~G~ig~~~~~~~~~~~-~----~~~lvav~d~~~~~a~~~a~-------------------------~~-- 69 (350)
T 4had_A 22 SMLRFGIISTAKIGRDNVVPAIQDA-E----NCVVTAIASRDLTRAREMAD-------------------------RF-- 69 (350)
T ss_dssp CCEEEEEESCCHHHHHTHHHHHHHC-S----SEEEEEEECSSHHHHHHHHH-------------------------HH--
T ss_pred CccEEEEEcChHHHHHHHHHHHHhC-C----CeEEEEEECCCHHHHHHHHH-------------------------Hc--
Confidence 5789999999999975 45566554 2 15654 78898876543210 00
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEee
Q 022050 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (303)
Q Consensus 120 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~--~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~ 197 (303)
.-.++.+|.++.++ +.|+|++|+|+..-.++..+... . +..| -+-
T Consensus 70 --------------------------g~~~~y~d~~ell~~~~iDaV~I~tP~~~H~~~~~~al~---a---GkhV-l~E 116 (350)
T 4had_A 70 --------------------------SVPHAFGSYEEMLASDVIDAVYIPLPTSQHIEWSIKAAD---A---GKHV-VCE 116 (350)
T ss_dssp --------------------------TCSEEESSHHHHHHCSSCSEEEECSCGGGHHHHHHHHHH---T---TCEE-EEC
T ss_pred --------------------------CCCeeeCCHHHHhcCCCCCEEEEeCCCchhHHHHHHHHh---c---CCEE-EEe
Confidence 01235678888764 58999999999877666655433 2 3443 356
Q ss_pred ccCccc
Q 022050 198 KGVEAE 203 (303)
Q Consensus 198 nGi~~~ 203 (303)
|.+..+
T Consensus 117 KPla~~ 122 (350)
T 4had_A 117 KPLALK 122 (350)
T ss_dssp SCCCSS
T ss_pred CCcccc
Confidence 666553
No 212
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=97.68 E-value=0.00019 Score=67.19 Aligned_cols=99 Identities=14% Similarity=0.084 Sum_probs=63.6
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeE-EEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (303)
.++||+|||+|.||..++..+... . +.++ .++++++++.+++. +. + +
T Consensus 5 ~~~~vgiiG~G~ig~~~~~~l~~~-~----~~~lv~v~d~~~~~~~~~a---------~~------------~--~---- 52 (362)
T 1ydw_A 5 TQIRIGVMGCADIARKVSRAIHLA-P----NATISGVASRSLEKAKAFA---------TA------------N--N---- 52 (362)
T ss_dssp -CEEEEEESCCTTHHHHHHHHHHC-T----TEEEEEEECSSHHHHHHHH---------HH------------T--T----
T ss_pred CceEEEEECchHHHHHHHHHHhhC-C----CcEEEEEEcCCHHHHHHHH---------HH------------h--C----
Confidence 458999999999999999988774 2 1554 57888876543211 00 0 0
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeec
Q 022050 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (303)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~--~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~n 198 (303)
++ ....+.+|.++.+. ++|+|++++|+....+++.+. +.. +..|+ +-|
T Consensus 53 -----~~------------------~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~a---l~a---Gk~V~-~EK 102 (362)
T 1ydw_A 53 -----YP------------------ESTKIHGSYESLLEDPEIDALYVPLPTSLHVEWAIKA---AEK---GKHIL-LEK 102 (362)
T ss_dssp -----CC------------------TTCEEESSHHHHHHCTTCCEEEECCCGGGHHHHHHHH---HTT---TCEEE-ECS
T ss_pred -----CC------------------CCCeeeCCHHHHhcCCCCCEEEEcCChHHHHHHHHHH---HHC---CCeEE-Eec
Confidence 00 02345678888775 589999999999877666553 333 45454 355
Q ss_pred cCcc
Q 022050 199 GVEA 202 (303)
Q Consensus 199 Gi~~ 202 (303)
.+..
T Consensus 103 P~a~ 106 (362)
T 1ydw_A 103 PVAM 106 (362)
T ss_dssp SCSS
T ss_pred CCcC
Confidence 4443
No 213
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=97.65 E-value=0.00019 Score=67.40 Aligned_cols=95 Identities=16% Similarity=0.062 Sum_probs=62.7
Q ss_pred CceEEEECCChHHHH-HHHHHHHhcCCCCCCeeEE-EEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhh
Q 022050 43 PLRIVGVGAGAWGSV-FTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (303)
Q Consensus 43 ~~kI~VIGaG~mG~a-iA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (303)
++||+|||+|.||.. ++..+.+..+ .+++ ++++++++++++. .
T Consensus 5 ~~rigiIG~G~~g~~~~~~~l~~~~~-----~~l~av~d~~~~~~~~~a-------------------------~----- 49 (359)
T 3m2t_A 5 LIKVGLVGIGAQMQENLLPSLLQMQD-----IRIVAACDSDLERARRVH-------------------------R----- 49 (359)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTCTT-----EEEEEEECSSHHHHGGGG-------------------------G-----
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCC-----cEEEEEEcCCHHHHHHHH-------------------------H-----
Confidence 479999999999985 8888876412 6665 8899887654311 0
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeec
Q 022050 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (303)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~--~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~n 198 (303)
.+ ....+.+|.++.+. +.|+|++++|+....+++.+.. .. +..|+ +-|
T Consensus 50 ----~~-------------------~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al---~a---GkhVl-~EK 99 (359)
T 3m2t_A 50 ----FI-------------------SDIPVLDNVPAMLNQVPLDAVVMAGPPQLHFEMGLLAM---SK---GVNVF-VEK 99 (359)
T ss_dssp ----TS-------------------CSCCEESSHHHHHHHSCCSEEEECSCHHHHHHHHHHHH---HT---TCEEE-ECS
T ss_pred ----hc-------------------CCCcccCCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHH---HC---CCeEE-EEC
Confidence 00 12345678888776 4599999999987766665543 33 44443 455
Q ss_pred cCcc
Q 022050 199 GVEA 202 (303)
Q Consensus 199 Gi~~ 202 (303)
.+..
T Consensus 100 Pla~ 103 (359)
T 3m2t_A 100 PPCA 103 (359)
T ss_dssp CSCS
T ss_pred CCcC
Confidence 5544
No 214
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=97.64 E-value=6.1e-05 Score=69.96 Aligned_cols=95 Identities=19% Similarity=0.197 Sum_probs=62.8
Q ss_pred CCCCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhh
Q 022050 40 EGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (303)
Q Consensus 40 ~~~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~ 119 (303)
....++|+|||+|.||...+..|....+ ..+|.+|+|+ +.+++. +.+... . +
T Consensus 118 ~~~~~~v~iIGaG~~a~~~~~al~~~~~----~~~V~v~~r~--~a~~la-----~~l~~~-------------~-g--- 169 (313)
T 3hdj_A 118 RPRSSVLGLFGAGTQGAEHAAQLSARFA----LEAILVHDPY--ASPEIL-----ERIGRR-------------C-G--- 169 (313)
T ss_dssp CTTCCEEEEECCSHHHHHHHHHHHHHSC----CCEEEEECTT--CCHHHH-----HHHHHH-------------H-T---
T ss_pred cCCCcEEEEECccHHHHHHHHHHHHhCC----CcEEEEECCc--HHHHHH-----HHHHHh-------------c-C---
Confidence 3456899999999999999999987412 1589999999 443321 111100 0 0
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEe
Q 022050 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISL 196 (303)
Q Consensus 120 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~ 196 (303)
..+... ++++++++||+||.|+|+.. .++. ..++++ ++.|+.+
T Consensus 170 --------------------------~~~~~~-~~~eav~~aDIVi~aT~s~~--pvl~--~~~l~~---G~~V~~v 212 (313)
T 3hdj_A 170 --------------------------VPARMA-APADIAAQADIVVTATRSTT--PLFA--GQALRA---GAFVGAI 212 (313)
T ss_dssp --------------------------SCEEEC-CHHHHHHHCSEEEECCCCSS--CSSC--GGGCCT---TCEEEEC
T ss_pred --------------------------CeEEEe-CHHHHHhhCCEEEEccCCCC--cccC--HHHcCC---CcEEEEC
Confidence 024455 88999999999999999852 2222 345666 6766544
No 215
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=97.62 E-value=0.00026 Score=65.17 Aligned_cols=38 Identities=13% Similarity=0.035 Sum_probs=31.1
Q ss_pred ceEEEEC-CChHHHHHHHHHHHhcCCCCCCeeEEEEec--CCchh
Q 022050 44 LRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRIWRR--PGRSV 85 (303)
Q Consensus 44 ~kI~VIG-aG~mG~aiA~~La~~~G~~~~~~~V~l~~r--~~~~~ 85 (303)
|||+|+| +|.+|.+++..|+.. |.. .++.++|+ +++++
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~-~~~---~el~L~Di~~~~~~~ 41 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALR-DIA---DEVVFVDIPDKEDDT 41 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCC---SEEEEECCGGGHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHhC-CCC---CEEEEEcCCCChhhH
Confidence 7999999 999999999999887 621 36999999 65443
No 216
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=97.60 E-value=0.00023 Score=66.72 Aligned_cols=93 Identities=17% Similarity=0.218 Sum_probs=61.5
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEE-EEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
++||+|||+|.||...+..+... . +.+++ ++++++++.+.. ..
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~-~----~~~l~av~d~~~~~~~~a--------------------------~~----- 48 (359)
T 3e18_A 5 KYQLVIVGYGGMGSYHVTLASAA-D----NLEVHGVFDILAEKREAA--------------------------AQ----- 48 (359)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTS-T----TEEEEEEECSSHHHHHHH--------------------------HT-----
T ss_pred cCcEEEECcCHHHHHHHHHHHhC-C----CcEEEEEEcCCHHHHHHH--------------------------Hh-----
Confidence 47999999999999999888765 2 15654 678887643210 00
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeecc
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~--~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nG 199 (303)
.++.+.+|.++.+. +.|+|++|+|+....+++.+.. .. +..|+ +-|.
T Consensus 49 ------------------------~g~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al---~a---GkhVl-~EKP 97 (359)
T 3e18_A 49 ------------------------KGLKIYESYEAVLADEKVDAVLIATPNDSHKELAISAL---EA---GKHVV-CEKP 97 (359)
T ss_dssp ------------------------TTCCBCSCHHHHHHCTTCCEEEECSCGGGHHHHHHHHH---HT---TCEEE-EESS
T ss_pred ------------------------cCCceeCCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHH---HC---CCCEE-eeCC
Confidence 02334567888776 7899999999987766665443 33 44443 5555
Q ss_pred Ccc
Q 022050 200 VEA 202 (303)
Q Consensus 200 i~~ 202 (303)
+..
T Consensus 98 ~a~ 100 (359)
T 3e18_A 98 VTM 100 (359)
T ss_dssp CCS
T ss_pred CcC
Confidence 544
No 217
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=97.59 E-value=0.00017 Score=66.35 Aligned_cols=67 Identities=19% Similarity=0.132 Sum_probs=46.2
Q ss_pred cCcceeccCCchhhhhhHHHHHhccCCCCCceEEEECCChHHHHHHHHHHHhcCCCCCCe-eEEEEecCCchhhh
Q 022050 14 SNGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVDR 87 (303)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~-~V~l~~r~~~~~~~ 87 (303)
.+|-+..+|-...--...|++. +...-..++++|+|+|.||.+++..|++. | . +|++|+|+++++++
T Consensus 113 ~~g~l~g~nTd~~G~~~~l~~~-~~~~l~~~~vlVlGaGg~g~aia~~L~~~-G-----~~~V~v~nR~~~ka~~ 180 (297)
T 2egg_A 113 NDGRLVGYNTDGLGYVQALEEE-MNITLDGKRILVIGAGGGARGIYFSLLST-A-----AERIDMANRTVEKAER 180 (297)
T ss_dssp ETTEEEEECCHHHHHHHHHHHH-TTCCCTTCEEEEECCSHHHHHHHHHHHTT-T-----CSEEEEECSSHHHHHH
T ss_pred cCCeEeeccCCHHHHHHHHHHh-CCCCCCCCEEEEECcHHHHHHHHHHHHHC-C-----CCEEEEEeCCHHHHHH
Confidence 4565555554444444444432 10122347999999999999999999998 8 6 89999999876643
No 218
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=97.57 E-value=0.00056 Score=63.46 Aligned_cols=36 Identities=14% Similarity=0.328 Sum_probs=29.7
Q ss_pred ceEEEEC-CChHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 022050 44 LRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (303)
Q Consensus 44 ~kI~VIG-aG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~ 82 (303)
|||+|+| +|.+|.+++..|+.+.+ +. .++.++|+++
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~-~~--~el~L~Di~~ 37 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLP-SG--SELSLYDIAP 37 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSC-TT--EEEEEECSST
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-CC--ceEEEEecCC
Confidence 7999999 89999999999987411 11 5899999987
No 219
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=97.57 E-value=0.00038 Score=65.38 Aligned_cols=93 Identities=18% Similarity=0.271 Sum_probs=60.3
Q ss_pred CCceEEEECCChHHHH-HHHHHHHhcCCCCCCeeEE-EEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhh
Q 022050 42 DPLRIVGVGAGAWGSV-FTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~a-iA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~ 119 (303)
.++||+|||+|.||.. .+..+....+ .+|+ +++++++++++ ..
T Consensus 6 ~~~rvgiiG~G~~g~~~~~~~l~~~~~-----~~l~av~d~~~~~~~~-------------------------~~----- 50 (364)
T 3e82_A 6 NTINIALIGYGFVGKTFHAPLIRSVPG-----LNLAFVASRDEEKVKR-------------------------DL----- 50 (364)
T ss_dssp -CEEEEEECCSHHHHHTHHHHHHTSTT-----EEEEEEECSCHHHHHH-------------------------HC-----
T ss_pred CcceEEEECCCHHHHHHHHHHHhhCCC-----eEEEEEEcCCHHHHHh-------------------------hC-----
Confidence 4589999999999996 5666655312 5654 77888754321 00
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEee
Q 022050 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (303)
Q Consensus 120 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~--~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~ 197 (303)
....+.+|.++.+. +.|+|++++|+....++..+. +.. +..|+ +-
T Consensus 51 --------------------------~~~~~~~~~~~ll~~~~~D~V~i~tp~~~H~~~~~~a---l~a---Gk~Vl-~E 97 (364)
T 3e82_A 51 --------------------------PDVTVIASPEAAVQHPDVDLVVIASPNATHAPLARLA---LNA---GKHVV-VD 97 (364)
T ss_dssp --------------------------TTSEEESCHHHHHTCTTCSEEEECSCGGGHHHHHHHH---HHT---TCEEE-EC
T ss_pred --------------------------CCCcEECCHHHHhcCCCCCEEEEeCChHHHHHHHHHH---HHC---CCcEE-Ee
Confidence 13456688888876 689999999998766665543 333 44444 45
Q ss_pred ccCcc
Q 022050 198 KGVEA 202 (303)
Q Consensus 198 nGi~~ 202 (303)
|.+..
T Consensus 98 KPla~ 102 (364)
T 3e82_A 98 KPFTL 102 (364)
T ss_dssp SCSCS
T ss_pred CCCcC
Confidence 65544
No 220
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=97.55 E-value=0.00021 Score=66.39 Aligned_cols=43 Identities=7% Similarity=0.096 Sum_probs=35.0
Q ss_pred CCCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 41 ~~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
...++|+|||+|.||..++..|+...+ ...|.+|+|++++.++
T Consensus 123 ~~~~~v~iIGaG~~a~~~~~al~~~~~----~~~V~v~~r~~~~a~~ 165 (322)
T 1omo_A 123 KNSSVFGFIGCGTQAYFQLEALRRVFD----IGEVKAYDVREKAAKK 165 (322)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHSC----CCEEEEECSSHHHHHH
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHhCC----ccEEEEECCCHHHHHH
Confidence 456899999999999999999987312 1689999999887654
No 221
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=97.54 E-value=0.00027 Score=66.85 Aligned_cols=79 Identities=16% Similarity=0.107 Sum_probs=55.5
Q ss_pred CceEEEECCC-hHHHHHHHHHHHhcCCCCCCeeE-EEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhh
Q 022050 43 PLRIVGVGAG-AWGSVFTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (303)
Q Consensus 43 ~~kI~VIGaG-~mG~aiA~~La~~~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (303)
++||+|||+| .||..++..+... . +.++ -++++++++.+++.+ ..
T Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~-~----~~~l~av~d~~~~~~~~~a~-------------------------~~--- 48 (387)
T 3moi_A 2 KIRFGICGLGFAGSVLMAPAMRHH-P----DAQIVAACDPNEDVRERFGK-------------------------EY--- 48 (387)
T ss_dssp CEEEEEECCSHHHHTTHHHHHHHC-T----TEEEEEEECSCHHHHHHHHH-------------------------HH---
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhC-C----CeEEEEEEeCCHHHHHHHHH-------------------------Hc---
Confidence 4899999999 9999999988775 3 1554 478888765543110 00
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHH
Q 022050 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEI 180 (303)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~--~aDlVIiaVp~~~~~~vl~~l 180 (303)
++...+|.++.++ +.|+|++++|+....+++.+.
T Consensus 49 --------------------------g~~~~~~~~ell~~~~vD~V~i~tp~~~H~~~~~~a 84 (387)
T 3moi_A 49 --------------------------GIPVFATLAEMMQHVQMDAVYIASPHQFHCEHVVQA 84 (387)
T ss_dssp --------------------------TCCEESSHHHHHHHSCCSEEEECSCGGGHHHHHHHH
T ss_pred --------------------------CCCeECCHHHHHcCCCCCEEEEcCCcHHHHHHHHHH
Confidence 2335678888765 599999999998766665543
No 222
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=97.51 E-value=0.00021 Score=62.84 Aligned_cols=101 Identities=14% Similarity=0.233 Sum_probs=67.2
Q ss_pred CCchhhhhhHHHHHhccCCCCCceEEEECCChHHHHHHHHH--HHhcCCCCCCee-EEEEecCCc-hhhhhhhhhHHHHH
Q 022050 22 NGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAML--QDSYGYLRDKVL-IRIWRRPGR-SVDRATAEHLFEVI 97 (303)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~kI~VIGaG~mG~aiA~~L--a~~~G~~~~~~~-V~l~~r~~~-~~~~~~~~~l~~~i 97 (303)
.|..++=.++++..++... ..+++|+|||++|.+++..+ ... | ++ |-++|.+++ +...
T Consensus 65 GY~V~~L~~~i~~~Lg~~~--~~~V~IvGaG~lG~aLa~~~~~~~~-g-----~~iVg~~D~dp~~kiG~---------- 126 (212)
T 3keo_A 65 GYDVKKLMNFFAEILNDHS--TTNVMLVGCGNIGRALLHYRFHDRN-K-----MQISMAFDLDSNDLVGK---------- 126 (212)
T ss_dssp SEEHHHHHHHHHHHTTTTS--CEEEEEECCSHHHHHHTTCCCCTTS-S-----EEEEEEEECTTSTTTTC----------
T ss_pred CEEHHHHHHHHHHHhCCCC--CCEEEEECcCHHHHHHHHhhhcccC-C-----eEEEEEEeCCchhccCc----------
Confidence 3455666677777777554 36899999999999999874 223 4 55 446788876 4320
Q ss_pred hhhhhHHHHhhhhcccchhhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHH
Q 022050 98 NSREDVLRRLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKE 175 (303)
Q Consensus 98 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~--~aDlVIiaVp~~~~~~ 175 (303)
....++ ++...+++++.++ +.|.+|+|+|+...++
T Consensus 127 --------------~~i~Gv-----------------------------pV~~~~dL~~~v~~~~Id~vIIAvPs~~aq~ 163 (212)
T 3keo_A 127 --------------TTEDGI-----------------------------PVYGISTINDHLIDSDIETAILTVPSTEAQE 163 (212)
T ss_dssp --------------BCTTCC-----------------------------BEEEGGGHHHHC-CCSCCEEEECSCGGGHHH
T ss_pred --------------eeECCe-----------------------------EEeCHHHHHHHHHHcCCCEEEEecCchhHHH
Confidence 011111 2333456666655 5899999999998888
Q ss_pred HHHHHHHH
Q 022050 176 VFEEISRY 183 (303)
Q Consensus 176 vl~~l~~~ 183 (303)
+.+.+...
T Consensus 164 v~d~lv~~ 171 (212)
T 3keo_A 164 VADILVKA 171 (212)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHc
Confidence 88887653
No 223
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=97.51 E-value=0.00022 Score=62.58 Aligned_cols=97 Identities=16% Similarity=0.160 Sum_probs=62.8
Q ss_pred hhhhhhHHHHHhccCCCCCceEEEECCChHHHHHHHHHHHhcCCCCCCee-EEEEecCCchhhhhhhhhHHHHHhhhhhH
Q 022050 25 LEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDV 103 (303)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~-V~l~~r~~~~~~~~~~~~l~~~i~~~~~~ 103 (303)
.++-++++++.++... .+||+|||+|.+|.+++..+....| .+ |-++|.++++...
T Consensus 64 v~~L~~~~~~~lg~~~--~~rV~IIGaG~~G~~la~~~~~~~g-----~~iVg~~D~dp~k~g~---------------- 120 (211)
T 2dt5_A 64 VPVLKRELRHILGLNR--KWGLCIVGMGRLGSALADYPGFGES-----FELRGFFDVDPEKVGR---------------- 120 (211)
T ss_dssp HHHHHHHHHHHHTTTS--CEEEEEECCSHHHHHHHHCSCCCSS-----EEEEEEEESCTTTTTC----------------
T ss_pred hHHHHHHHHHHhCcCC--CCEEEEECccHHHHHHHHhHhhcCC-----cEEEEEEeCCHHHHhh----------------
Confidence 3344555566666543 4799999999999999986322103 55 4567888764321
Q ss_pred HHHhhhhcccchhhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc-CCCEEEEecCchhHHHHHHHHHH
Q 022050 104 LRRLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW-DADIVINGLPSTETKEVFEEISR 182 (303)
Q Consensus 104 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~-~aDlVIiaVp~~~~~~vl~~l~~ 182 (303)
...++ ++...+++++.++ +.|.|++|+|+....++.+.+..
T Consensus 121 ---------~i~gv-----------------------------~V~~~~dl~ell~~~ID~ViIA~Ps~~~~ei~~~l~~ 162 (211)
T 2dt5_A 121 ---------PVRGG-----------------------------VIEHVDLLPQRVPGRIEIALLTVPREAAQKAADLLVA 162 (211)
T ss_dssp ---------EETTE-----------------------------EEEEGGGHHHHSTTTCCEEEECSCHHHHHHHHHHHHH
T ss_pred ---------hhcCC-----------------------------eeecHHhHHHHHHcCCCEEEEeCCchhHHHHHHHHHH
Confidence 11111 2333567777654 58999999999988777777654
No 224
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=97.49 E-value=0.00033 Score=67.54 Aligned_cols=106 Identities=17% Similarity=0.189 Sum_probs=65.6
Q ss_pred CceEEEECCChH-HHHHHHHHHH--hcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhh
Q 022050 43 PLRIVGVGAGAW-GSVFTAMLQD--SYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (303)
Q Consensus 43 ~~kI~VIGaG~m-G~aiA~~La~--~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~ 119 (303)
+|||+|||+|.. +..+...|+. . + +.. .+|.|+|.++++++... .+ ... +..
T Consensus 2 ~~KI~IIGaG~v~~~~l~~~l~~~~~-~-l~~-~el~L~Di~~~~~~~~~--~~----~~~-------------~~~--- 56 (417)
T 1up7_A 2 HMRIAVIGGGSSYTPELVKGLLDISE-D-VRI-DEVIFYDIDEEKQKIVV--DF----VKR-------------LVK--- 56 (417)
T ss_dssp CCEEEEETTTCTTHHHHHHHHHHHTT-T-SCC-CEEEEECSCHHHHHHHH--HH----HHH-------------HHT---
T ss_pred CCEEEEECCCHHHHHHHHHHHHhccc-C-CCc-CEEEEEeCCHHHHHHHH--HH----HHH-------------Hhh---
Confidence 589999999984 2222234455 3 3 211 58999999998765311 10 000 000
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch----------------------------
Q 022050 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST---------------------------- 171 (303)
Q Consensus 120 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~---------------------------- 171 (303)
. . .++..++|..+++++||+||++.-..
T Consensus 57 ---~--------------------~-~~v~~t~d~~~al~~AD~Viitagvg~~~~~~rd~~i~~k~glvgqeT~G~GGi 112 (417)
T 1up7_A 57 ---D--------------------R-FKVLISDTFEGAVVDAKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGF 112 (417)
T ss_dssp ---T--------------------S-SEEEECSSHHHHHTTCSEEEECCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHH
T ss_pred ---C--------------------C-eEEEEeCCHHHHhCCCCEEEEcCCCCCCCccchhhhhhhhcCcccccccccchh
Confidence 0 0 14667788888899999999998221
Q ss_pred --------hHHHHHHHHHHHhhccCCCCEEEEeeccCcc
Q 022050 172 --------ETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (303)
Q Consensus 172 --------~~~~vl~~l~~~l~~~~~~~iivs~~nGi~~ 202 (303)
.+.++++++.++. + ++++..+|.+..
T Consensus 113 ~~~~rni~i~~~i~~~i~~~~-~----A~lin~TNPvdi 146 (417)
T 1up7_A 113 SAALRAFPIVEEYVDTVRKTS-N----ATIVNFTNPSGH 146 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT-C----CEEEECSSSHHH
T ss_pred HHhhccHHHHHHHHHHHHHHC-C----EEEEEeCChHHH
Confidence 1445666666665 4 788989988654
No 225
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=97.49 E-value=0.00017 Score=69.85 Aligned_cols=52 Identities=17% Similarity=0.118 Sum_probs=39.0
Q ss_pred hhhhhHHHHHhccCCCCCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCch
Q 022050 26 EERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (303)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (303)
+.-++.+++-.+..- .-++|+|+|.|.+|..+|..+... | .+|+++++++..
T Consensus 195 ~slldgi~ratg~~L-~GktVgIiG~G~IG~~vA~~Lka~-G-----a~Viv~D~~p~~ 246 (436)
T 3h9u_A 195 ESLVDGIKRATDVMI-AGKTACVCGYGDVGKGCAAALRGF-G-----ARVVVTEVDPIN 246 (436)
T ss_dssp HHHHHHHHHHHCCCC-TTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHH
T ss_pred HHHHHHHHHhcCCcc-cCCEEEEEeeCHHHHHHHHHHHHC-C-----CEEEEECCChhh
Confidence 344555555443322 238999999999999999999887 8 899999998753
No 226
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=97.49 E-value=0.00024 Score=68.39 Aligned_cols=39 Identities=21% Similarity=0.423 Sum_probs=35.7
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
.++|.|+|+|.+|..++..|... | ++|++++++++.++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~-g-----~~vvvId~d~~~v~~ 42 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSS-G-----VKMVVLDHDPDHIET 42 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-T-----CCEEEEECCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-C-----CCEEEEECCHHHHHH
Confidence 47899999999999999999998 8 899999999987764
No 227
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=97.49 E-value=0.00035 Score=65.00 Aligned_cols=94 Identities=13% Similarity=0.180 Sum_probs=59.5
Q ss_pred CceEEEECCChHHHHH-HH-HHHHhcCCCCCCeeEE-EEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhh
Q 022050 43 PLRIVGVGAGAWGSVF-TA-MLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (303)
Q Consensus 43 ~~kI~VIGaG~mG~ai-A~-~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~ 119 (303)
++||+|||+|.||..+ +. .+....+ .+++ ++++++++.+. ....
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~~~~~~~~-----~~l~av~d~~~~~~~~--------------------------~~~~-- 48 (345)
T 3f4l_A 2 VINCAFIGFGKSTTRYHLPYVLNRKDS-----WHVAHIFRRHAKPEEQ--------------------------APIY-- 48 (345)
T ss_dssp CEEEEEECCSHHHHHHTHHHHTTCTTT-----EEEEEEECSSCCGGGG--------------------------SGGG--
T ss_pred ceEEEEEecCHHHHHHHHHHHHhcCCC-----eEEEEEEcCCHhHHHH--------------------------HHhc--
Confidence 4799999999999864 44 2233213 6665 88998765421 0000
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcC--CCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEee
Q 022050 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWD--ADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (303)
Q Consensus 120 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~--aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~ 197 (303)
..+.+.+|+++.+.+ .|+|++++|+....++..+.. .. +..|+ +-
T Consensus 49 --------------------------~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al---~a---Gk~Vl-~E 95 (345)
T 3f4l_A 49 --------------------------SHIHFTSDLDEVLNDPDVKLVVVCTHADSHFEYAKRAL---EA---GKNVL-VE 95 (345)
T ss_dssp --------------------------TTCEEESCTHHHHTCTTEEEEEECSCGGGHHHHHHHHH---HT---TCEEE-EC
T ss_pred --------------------------CCCceECCHHHHhcCCCCCEEEEcCChHHHHHHHHHHH---Hc---CCcEE-Ee
Confidence 135567888887765 899999999987666655433 33 44444 44
Q ss_pred ccCcc
Q 022050 198 KGVEA 202 (303)
Q Consensus 198 nGi~~ 202 (303)
|.+..
T Consensus 96 KP~a~ 100 (345)
T 3f4l_A 96 KPFTP 100 (345)
T ss_dssp SSSCS
T ss_pred CCCCC
Confidence 65544
No 228
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=97.48 E-value=0.00048 Score=63.64 Aligned_cols=79 Identities=10% Similarity=0.177 Sum_probs=54.4
Q ss_pred CceEEEECCChHHH-HHHHHHHHhcCCCCCCeeE-EEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhh
Q 022050 43 PLRIVGVGAGAWGS-VFTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (303)
Q Consensus 43 ~~kI~VIGaG~mG~-aiA~~La~~~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (303)
++||+|||+|.+|. .++..+... + .++ -++++++++.+++.++ +.
T Consensus 4 ~~rvgiiG~G~~~~~~~~~~l~~~-~-----~~lvav~d~~~~~~~~~a~~----------------------~~----- 50 (336)
T 2p2s_A 4 KIRFAAIGLAHNHIYDMCQQLIDA-G-----AELAGVFESDSDNRAKFTSL----------------------FP----- 50 (336)
T ss_dssp CCEEEEECCSSTHHHHHHHHHHHT-T-----CEEEEEECSCTTSCHHHHHH----------------------ST-----
T ss_pred ccEEEEECCChHHHHHhhhhhcCC-C-----cEEEEEeCCCHHHHHHHHHh----------------------cC-----
Confidence 48999999999996 577777655 5 664 6899998766532100 00
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHH
Q 022050 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEI 180 (303)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~--~aDlVIiaVp~~~~~~vl~~l 180 (303)
...+.+|.++.++ +.|+|++++|+....++..+.
T Consensus 51 --------------------------~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~a 86 (336)
T 2p2s_A 51 --------------------------SVPFAASAEQLITDASIDLIACAVIPCDRAELALRT 86 (336)
T ss_dssp --------------------------TCCBCSCHHHHHTCTTCCEEEECSCGGGHHHHHHHH
T ss_pred --------------------------CCcccCCHHHHhhCCCCCEEEEeCChhhHHHHHHHH
Confidence 1224567877765 689999999998766655543
No 229
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=97.48 E-value=0.00097 Score=59.58 Aligned_cols=34 Identities=21% Similarity=0.274 Sum_probs=31.1
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~ 82 (303)
+||+|+|+|.+|+.+|..|+.. |. .+++++|++.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~-Gv----~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASA-GV----GNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TC----SEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHc-CC----CeEEEEcCCC
Confidence 6899999999999999999999 82 3899999987
No 230
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=97.48 E-value=0.00037 Score=64.10 Aligned_cols=38 Identities=29% Similarity=0.292 Sum_probs=27.4
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEE-EEecCCchh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGRSV 85 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~-l~~r~~~~~ 85 (303)
++||+|||+|.||..++..+.+..+ .++. +++++++++
T Consensus 9 ~irv~IIG~G~iG~~~~~~l~~~~~-----~elvav~d~~~~~~ 47 (304)
T 3bio_A 9 KIRAAIVGYGNIGRYALQALREAPD-----FEIAGIVRRNPAEV 47 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTT-----EEEEEEECC-----
T ss_pred CCEEEEECChHHHHHHHHHHhcCCC-----CEEEEEEcCCHHHH
Confidence 4899999999999999999887413 6766 788887643
No 231
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=97.48 E-value=0.00041 Score=65.12 Aligned_cols=94 Identities=14% Similarity=0.113 Sum_probs=60.9
Q ss_pred CceEEEECCChHHH-HHHHHHHHhcCCCCCCee-EEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhh
Q 022050 43 PLRIVGVGAGAWGS-VFTAMLQDSYGYLRDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (303)
Q Consensus 43 ~~kI~VIGaG~mG~-aiA~~La~~~G~~~~~~~-V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (303)
++||+|||+|.+|. .++..+... + .+ |-++++++++++++.+ .
T Consensus 26 ~irvgiiG~G~~~~~~~~~~~~~~-~-----~~lvav~d~~~~~a~~~a~-------------------------~---- 70 (361)
T 3u3x_A 26 ELRFAAVGLNHNHIYGQVNCLLRA-G-----ARLAGFHEKDDALAAEFSA-------------------------V---- 70 (361)
T ss_dssp CCEEEEECCCSTTHHHHHHHHHHT-T-----CEEEEEECSCHHHHHHHHH-------------------------H----
T ss_pred CcEEEEECcCHHHHHHHHHHhhcC-C-----cEEEEEEcCCHHHHHHHHH-------------------------H----
Confidence 47999999999984 566666655 5 56 4578998876543110 0
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcC--CCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeec
Q 022050 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWD--ADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (303)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~--aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~n 198 (303)
+ ....+.+|.++.+.+ .|+|++++|+....++..... .. +..|+ +-|
T Consensus 71 -----~-------------------~~~~~~~~~~~ll~~~~vD~V~I~tp~~~H~~~~~~al---~a---GkhVl-~EK 119 (361)
T 3u3x_A 71 -----Y-------------------ADARRIATAEEILEDENIGLIVSAAVSSERAELAIRAM---QH---GKDVL-VDK 119 (361)
T ss_dssp -----S-------------------SSCCEESCHHHHHTCTTCCEEEECCCHHHHHHHHHHHH---HT---TCEEE-EES
T ss_pred -----c-------------------CCCcccCCHHHHhcCCCCCEEEEeCChHHHHHHHHHHH---HC---CCeEE-EeC
Confidence 0 013456788887764 899999999987766655443 32 44433 556
Q ss_pred cCcc
Q 022050 199 GVEA 202 (303)
Q Consensus 199 Gi~~ 202 (303)
.+..
T Consensus 120 Pla~ 123 (361)
T 3u3x_A 120 PGMT 123 (361)
T ss_dssp CSCS
T ss_pred CCCC
Confidence 5554
No 232
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=97.45 E-value=0.00029 Score=67.94 Aligned_cols=85 Identities=14% Similarity=0.062 Sum_probs=55.4
Q ss_pred CCceEEEECCChHHH-HHHHHHHHhcCCCCCCeeE-EEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhh
Q 022050 42 DPLRIVGVGAGAWGS-VFTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~-aiA~~La~~~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~ 119 (303)
.++||+|||+|.||. .++..+... + +.++ .++++++++.+++.++ + ..+.
T Consensus 82 ~~irigiIG~G~~g~~~~~~~l~~~-~----~~~lvav~d~~~~~~~~~a~~---------------~-----g~~~--- 133 (433)
T 1h6d_A 82 RRFGYAIVGLGKYALNQILPGFAGC-Q----HSRIEALVSGNAEKAKIVAAE---------------Y-----GVDP--- 133 (433)
T ss_dssp CCEEEEEECCSHHHHHTHHHHTTTC-S----SEEEEEEECSCHHHHHHHHHH---------------T-----TCCG---
T ss_pred CceEEEEECCcHHHHHHHHHHHhhC-C----CcEEEEEEcCCHHHHHHHHHH---------------h-----CCCc---
Confidence 357999999999997 888888764 2 1554 5789887755431100 0 0000
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHH
Q 022050 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEI 180 (303)
Q Consensus 120 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~--~aDlVIiaVp~~~~~~vl~~l 180 (303)
..+.+.+|.++.++ +.|+|++++|+....+++...
T Consensus 134 --------------------------~~~~~~~~~~~ll~~~~vD~V~iatp~~~h~~~~~~a 170 (433)
T 1h6d_A 134 --------------------------RKIYDYSNFDKIAKDPKIDAVYIILPNSLHAEFAIRA 170 (433)
T ss_dssp --------------------------GGEECSSSGGGGGGCTTCCEEEECSCGGGHHHHHHHH
T ss_pred --------------------------ccccccCCHHHHhcCCCCCEEEEcCCchhHHHHHHHH
Confidence 01334466777665 689999999998776666554
No 233
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=97.45 E-value=0.00018 Score=70.21 Aligned_cols=40 Identities=23% Similarity=0.372 Sum_probs=36.4
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
..|||.|+|+|.+|..+|..|... | |+|++++++++.+++
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~~-~-----~~v~vId~d~~~~~~ 41 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVGE-N-----NDITIVDKDGDRLRE 41 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCST-T-----EEEEEEESCHHHHHH
T ss_pred CcCEEEEECCCHHHHHHHHHHHHC-C-----CCEEEEECCHHHHHH
Confidence 359999999999999999999988 8 999999999987764
No 234
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=97.45 E-value=0.00089 Score=61.27 Aligned_cols=94 Identities=17% Similarity=0.174 Sum_probs=66.7
Q ss_pred CCceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhh
Q 022050 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (303)
Q Consensus 42 ~~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (303)
+.+||+|+|+ |.||...+..+.+. | .+ .++..++..... ..
T Consensus 6 ~~~rVaViG~sG~~G~~~~~~l~~~-g-----~~-~V~~V~p~~~g~-------------------------~~------ 47 (288)
T 2nu8_A 6 KNTKVICQGFTGSQGTFHSEQAIAY-G-----TK-MVGGVTPGKGGT-------------------------TH------ 47 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHH-T-----CE-EEEEECTTCTTC-------------------------EE------
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-C-----Ce-EEEEeCCCcccc-------------------------ee------
Confidence 4589999999 99999999999887 7 66 345555532100 00
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeec
Q 022050 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (303)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~--~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~n 198 (303)
..+.+..+++++.+ ++|++++++|+....+++++.... . -..++..+.
T Consensus 48 -------------------------~G~~vy~sl~el~~~~~~D~viI~tP~~~~~~~~~ea~~~-G----i~~iVi~t~ 97 (288)
T 2nu8_A 48 -------------------------LGLPVFNTVREAVAATGATASVIYVPAPFCKDSILEAIDA-G----IKLIITITE 97 (288)
T ss_dssp -------------------------TTEEEESSHHHHHHHHCCCEEEECCCGGGHHHHHHHHHHT-T----CSEEEECCC
T ss_pred -------------------------CCeeccCCHHHHhhcCCCCEEEEecCHHHHHHHHHHHHHC-C----CCEEEEECC
Confidence 13556677888776 899999999999998888886653 1 234566777
Q ss_pred cCccc
Q 022050 199 GVEAE 203 (303)
Q Consensus 199 Gi~~~ 203 (303)
|+..+
T Consensus 98 G~~~~ 102 (288)
T 2nu8_A 98 GIPTL 102 (288)
T ss_dssp CCCHH
T ss_pred CCCHH
Confidence 87653
No 235
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=97.43 E-value=0.0005 Score=62.53 Aligned_cols=127 Identities=18% Similarity=0.134 Sum_probs=73.9
Q ss_pred CceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEE-EEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhh
Q 022050 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (303)
Q Consensus 43 ~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (303)
+|||+|+|+ |.||..++..+....| ++++ +++++++.... + ....+.+.
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~-----~elva~~d~~~~~~~g---~------------------d~~~~~g~--- 55 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALALEG-----VQLGAALEREGSSLLG---S------------------DAGELAGA--- 55 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTT-----EECCCEECCTTCTTCS---C------------------CTTCSSSS---
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCC-----CEEEEEEecCchhhhh---h------------------hHHHHcCC---
Confidence 489999999 9999999998875424 7766 67776643210 0 00000000
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeeccC
Q 022050 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (303)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nGi 200 (303)
. ...+.+++|+++++.++|+||.++++....+.+.... .. +..+|+-+.|+
T Consensus 56 ------~-----------------~~~v~~~~dl~~~l~~~DvVIDft~p~~~~~~~~~a~---~~---G~~vVigTtG~ 106 (273)
T 1dih_A 56 ------G-----------------KTGVTVQSSLDAVKDDFDVFIDFTRPEGTLNHLAFCR---QH---GKGMVIGTTGF 106 (273)
T ss_dssp ------S-----------------CCSCCEESCSTTTTTSCSEEEECSCHHHHHHHHHHHH---HT---TCEEEECCCCC
T ss_pred ------C-----------------cCCceecCCHHHHhcCCCEEEEcCChHHHHHHHHHHH---hC---CCCEEEECCCC
Confidence 0 0134566788777788999997777665555554433 33 55566655576
Q ss_pred ccccccccccCCHHHHHHhHhCCCCccEEEEeCCCcHHHH
Q 022050 201 EAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEI 240 (303)
Q Consensus 201 ~~~~~~~~~~~~~~~~i~~~l~~~~~~~~v~~GP~~a~ev 240 (303)
..+. .+.+.+.-.. ..++..||+...+
T Consensus 107 ~~e~---------~~~L~~~a~~----~~vv~a~N~siGv 133 (273)
T 1dih_A 107 DEAG---------KQAIRDAAAD----IAIVFAANFSVGV 133 (273)
T ss_dssp CHHH---------HHHHHHHTTT----SCEEECSCCCHHH
T ss_pred CHHH---------HHHHHHhcCC----CCEEEEecCcHHH
Confidence 6531 1234443221 2366788876543
No 236
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=97.41 E-value=0.00056 Score=67.34 Aligned_cols=37 Identities=11% Similarity=0.145 Sum_probs=33.1
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSV 85 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~ 85 (303)
-++|+|+|+|.||..+|..+... | .+|+++++++.++
T Consensus 274 GktV~IiG~G~IG~~~A~~lka~-G-----a~Viv~d~~~~~~ 310 (494)
T 3ce6_A 274 GKKVLICGYGDVGKGCAEAMKGQ-G-----ARVSVTEIDPINA 310 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHH
T ss_pred cCEEEEEccCHHHHHHHHHHHHC-C-----CEEEEEeCCHHHH
Confidence 48999999999999999999887 8 8999999998654
No 237
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=97.40 E-value=0.00018 Score=68.56 Aligned_cols=39 Identities=15% Similarity=0.147 Sum_probs=34.9
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
..||+|||+|.+|...|..+... | .+|+++|+++++++.
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~l-G-----a~V~v~D~~~~~l~~ 222 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRL-G-----AKTTGYDVRPEVAEQ 222 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHH-T-----CEEEEECSSGGGHHH
T ss_pred CCEEEEECchHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHH
Confidence 47999999999999999999887 8 799999999987654
No 238
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=97.39 E-value=0.00045 Score=63.96 Aligned_cols=36 Identities=19% Similarity=0.371 Sum_probs=28.5
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCee-EEEEecCCc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGR 83 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~-V~l~~r~~~ 83 (303)
++||+|||+|+||..++..+.++ + +.+ |.+++++++
T Consensus 3 ~irV~IiG~G~mG~~~~~~l~~~-~----~~elvav~d~~~~ 39 (320)
T 1f06_A 3 NIRVAIVGYGNLGRSVEKLIAKQ-P----DMDLVGIFSRRAT 39 (320)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTC-S----SEEEEEEEESSSC
T ss_pred CCEEEEEeecHHHHHHHHHHhcC-C----CCEEEEEEcCCHH
Confidence 47999999999999999998765 3 145 457888764
No 239
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=97.37 E-value=0.0011 Score=61.67 Aligned_cols=97 Identities=19% Similarity=0.144 Sum_probs=62.9
Q ss_pred CCceEEEECCC-hHHHHHHHHHHHhcCCCCCCeeE-EEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhh
Q 022050 42 DPLRIVGVGAG-AWGSVFTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (303)
Q Consensus 42 ~~~kI~VIGaG-~mG~aiA~~La~~~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~ 119 (303)
.++||+|||+| .||...+..+... + ++.++ -++++++++++++.+ ..
T Consensus 17 ~~irvgiIG~G~~~g~~~~~~l~~~-~---~~~~lvav~d~~~~~~~~~a~-------------------------~~-- 65 (340)
T 1zh8_A 17 RKIRLGIVGCGIAARELHLPALKNL-S---HLFEITAVTSRTRSHAEEFAK-------------------------MV-- 65 (340)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTT-T---TTEEEEEEECSSHHHHHHHHH-------------------------HH--
T ss_pred CceeEEEEecCHHHHHHHHHHHHhC-C---CceEEEEEEcCCHHHHHHHHH-------------------------Hh--
Confidence 45899999999 8999999888764 2 11554 578988876543110 00
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEee
Q 022050 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (303)
Q Consensus 120 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~--~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~ 197 (303)
....+.+|.++.+. +.|+|++++|+....++..+.. .. +..|+ +-
T Consensus 66 --------------------------~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al---~a---GkhVl-~E 112 (340)
T 1zh8_A 66 --------------------------GNPAVFDSYEELLESGLVDAVDLTLPVELNLPFIEKAL---RK---GVHVI-CE 112 (340)
T ss_dssp --------------------------SSCEEESCHHHHHHSSCCSEEEECCCGGGHHHHHHHHH---HT---TCEEE-EE
T ss_pred --------------------------CCCcccCCHHHHhcCCCCCEEEEeCCchHHHHHHHHHH---HC---CCcEE-Ee
Confidence 01245678888765 5899999999987666655433 33 44443 35
Q ss_pred ccCcc
Q 022050 198 KGVEA 202 (303)
Q Consensus 198 nGi~~ 202 (303)
|.+..
T Consensus 113 KPla~ 117 (340)
T 1zh8_A 113 KPIST 117 (340)
T ss_dssp SSSSS
T ss_pred CCCCC
Confidence 65544
No 240
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=97.36 E-value=0.0025 Score=60.52 Aligned_cols=115 Identities=12% Similarity=0.025 Sum_probs=68.2
Q ss_pred CCceEEEEC-CChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhh
Q 022050 42 DPLRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (303)
Q Consensus 42 ~~~kI~VIG-aG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (303)
.++||+|+| +|.+|.++|..++.. +.+.....+.|++.+.+..+... ++. .+. +.+.
T Consensus 31 ~~~KV~ViGAaG~VG~~la~~l~~~-~l~~e~~~l~L~d~d~~~~~~~~-~G~--amD---------------L~h~--- 88 (375)
T 7mdh_A 31 KLVNIAVSGAAGMISNHLLFKLASG-EVFGQDQPIALKLLGSERSFQAL-EGV--AME---------------LEDS--- 88 (375)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHT-TTTCTTCCEEEEEECCGGGHHHH-HHH--HHH---------------HHTT---
T ss_pred CCCEEEEECCCChHHHHHHHHHHcC-CcCCCCceeEEEecCccchhhhh-HHH--HHh---------------HHhh---
Confidence 458999999 799999999999988 75432234888776654322100 110 000 1100
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEec--Cch--------------hHHHHHHHHHHHh
Q 022050 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGL--PST--------------ETKEVFEEISRYW 184 (303)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaV--p~~--------------~~~~vl~~l~~~l 184 (303)
.++ .+.++.++++..+++++||+||++- |.+ .++++.+.|..+.
T Consensus 89 ----~~p----------------~~~~v~i~~~~y~~~~daDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a 148 (375)
T 7mdh_A 89 ----LYP----------------LLREVSIGIDPYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVA 148 (375)
T ss_dssp ----TCT----------------TEEEEEEESCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred ----hhh----------------hcCCcEEecCCHHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 000 0024566777778899999999964 321 2444555555553
Q ss_pred hccCCCCEEEEeeccCc
Q 022050 185 KERITVPVIISLAKGVE 201 (303)
Q Consensus 185 ~~~~~~~iivs~~nGi~ 201 (303)
.+ +.+++..+|.+.
T Consensus 149 ~p---~~ivlVvsNPvD 162 (375)
T 7mdh_A 149 SK---NVKVLVVGNPCN 162 (375)
T ss_dssp CT---TCEEEECSSSHH
T ss_pred CC---CeEEEEecCchh
Confidence 44 678888887643
No 241
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=97.35 E-value=0.00094 Score=62.51 Aligned_cols=93 Identities=13% Similarity=0.131 Sum_probs=60.3
Q ss_pred CCceEEEECCChHHHH-HHHHHHHhcCCCCCCeeEE-EEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhh
Q 022050 42 DPLRIVGVGAGAWGSV-FTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~a-iA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~ 119 (303)
.++||+|||+|.||.. .+..+....+ .+|+ +++++++++.+ ..
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~~-----~~l~av~d~~~~~~~~-------------------------~~----- 48 (362)
T 3fhl_A 4 EIIKTGLAAFGMSGQVFHAPFISTNPH-----FELYKIVERSKELSKE-------------------------RY----- 48 (362)
T ss_dssp CCEEEEESCCSHHHHHTTHHHHHHCTT-----EEEEEEECSSCCGGGT-------------------------TC-----
T ss_pred CceEEEEECCCHHHHHHHHHHHhhCCC-----eEEEEEEcCCHHHHHH-------------------------hC-----
Confidence 3589999999999997 5666655413 5654 78888764311 00
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcC--CCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEee
Q 022050 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWD--ADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (303)
Q Consensus 120 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~--aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~ 197 (303)
....+.+|.++.+.+ .|+|++|+|+....++..+.. .. +..|+ +-
T Consensus 49 --------------------------~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al---~a---GkhVl-~E 95 (362)
T 3fhl_A 49 --------------------------PQASIVRSFKELTEDPEIDLIVVNTPDNTHYEYAGMAL---EA---GKNVV-VE 95 (362)
T ss_dssp --------------------------TTSEEESCSHHHHTCTTCCEEEECSCGGGHHHHHHHHH---HT---TCEEE-EE
T ss_pred --------------------------CCCceECCHHHHhcCCCCCEEEEeCChHHHHHHHHHHH---HC---CCeEE-Ee
Confidence 124566788887765 899999999987666655433 33 44443 45
Q ss_pred ccCcc
Q 022050 198 KGVEA 202 (303)
Q Consensus 198 nGi~~ 202 (303)
|.+..
T Consensus 96 KP~a~ 100 (362)
T 3fhl_A 96 KPFTS 100 (362)
T ss_dssp SSCCS
T ss_pred cCCCC
Confidence 55544
No 242
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=97.32 E-value=0.00036 Score=68.65 Aligned_cols=91 Identities=12% Similarity=0.077 Sum_probs=63.1
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
.-++|+|||.|.||..+|..+..- | .+|++|++++..... . ..
T Consensus 276 ~GktVgIIG~G~IG~~vA~~l~~~-G-----~~V~v~d~~~~~~~~-----------a--------------~~------ 318 (494)
T 3d64_A 276 AGKIAVVAGYGDVGKGCAQSLRGL-G-----ATVWVTEIDPICALQ-----------A--------------AM------ 318 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTT-T-----CEEEEECSCHHHHHH-----------H--------------HT------
T ss_pred CCCEEEEEccCHHHHHHHHHHHHC-C-----CEEEEEeCChHhHHH-----------H--------------HH------
Confidence 448999999999999999999877 8 899999998753210 0 00
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeecc
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nG 199 (303)
....+ .+++++++++|+|++++....+ +-++....+++ +++|+.+..|
T Consensus 319 ------------------------~G~~~-~~l~ell~~aDiVi~~~~t~~l--I~~~~l~~MK~---gAilINvgrg 366 (494)
T 3d64_A 319 ------------------------EGYRV-VTMEYAADKADIFVTATGNYHV--INHDHMKAMRH---NAIVCNIGHF 366 (494)
T ss_dssp ------------------------TTCEE-CCHHHHTTTCSEEEECSSSSCS--BCHHHHHHCCT---TEEEEECSSS
T ss_pred ------------------------cCCEe-CCHHHHHhcCCEEEECCCcccc--cCHHHHhhCCC---CcEEEEcCCC
Confidence 01222 3688889999999999854321 01223334666 7888877776
No 243
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=97.31 E-value=0.0011 Score=61.84 Aligned_cols=77 Identities=13% Similarity=0.169 Sum_probs=53.0
Q ss_pred CceEEEECCChHHHH-HHHHHHHhcCCCCCCeeEE-EEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhh
Q 022050 43 PLRIVGVGAGAWGSV-FTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (303)
Q Consensus 43 ~~kI~VIGaG~mG~a-iA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (303)
++||+|||+|.||.. .+..+....+ .+|+ +++++++++++ ..
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~~~~~~~-----~~l~av~d~~~~~~~~-------------------------~~------ 50 (352)
T 3kux_A 7 KIKVGLLGYGYASKTFHAPLIMGTPG-----LELAGVSSSDASKVHA-------------------------DW------ 50 (352)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTT-----EEEEEEECSCHHHHHT-------------------------TC------
T ss_pred CceEEEECCCHHHHHHHHHHHhhCCC-----cEEEEEECCCHHHHHh-------------------------hC------
Confidence 479999999999997 6666665412 5654 77888754321 00
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcC--CCEEEEecCchhHHHHHHHH
Q 022050 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWD--ADIVINGLPSTETKEVFEEI 180 (303)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~--aDlVIiaVp~~~~~~vl~~l 180 (303)
....+.+|.++.+.+ .|+|++++|+....++..+.
T Consensus 51 -------------------------~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~a 87 (352)
T 3kux_A 51 -------------------------PAIPVVSDPQMLFNDPSIDLIVIPTPNDTHFPLAQSA 87 (352)
T ss_dssp -------------------------SSCCEESCHHHHHHCSSCCEEEECSCTTTHHHHHHHH
T ss_pred -------------------------CCCceECCHHHHhcCCCCCEEEEeCChHHHHHHHHHH
Confidence 124456788887754 89999999998766655543
No 244
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=97.29 E-value=0.00042 Score=67.96 Aligned_cols=92 Identities=17% Similarity=0.050 Sum_probs=63.4
Q ss_pred CCCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhh
Q 022050 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (303)
Q Consensus 41 ~~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (303)
..-++|+|||.|.||..+|..+... | .+|++|++++...... ..
T Consensus 255 l~GktVgIIG~G~IG~~vA~~l~~~-G-----~~Viv~d~~~~~~~~a-------------------------~~----- 298 (479)
T 1v8b_A 255 ISGKIVVICGYGDVGKGCASSMKGL-G-----ARVYITEIDPICAIQA-------------------------VM----- 298 (479)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHH-T-----CEEEEECSCHHHHHHH-------------------------HT-----
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhC-c-----CEEEEEeCChhhHHHH-------------------------HH-----
Confidence 3458999999999999999999887 8 8999999987532110 00
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeecc
Q 022050 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (303)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nG 199 (303)
..+.+ .++++++++||+|++++....+- -++....+++ +++|+.+..|
T Consensus 299 -------------------------~g~~~-~~l~ell~~aDiVi~~~~t~~lI--~~~~l~~MK~---gailiNvgrg 346 (479)
T 1v8b_A 299 -------------------------EGFNV-VTLDEIVDKGDFFITCTGNVDVI--KLEHLLKMKN---NAVVGNIGHF 346 (479)
T ss_dssp -------------------------TTCEE-CCHHHHTTTCSEEEECCSSSSSB--CHHHHTTCCT---TCEEEECSST
T ss_pred -------------------------cCCEe-cCHHHHHhcCCEEEECCChhhhc--CHHHHhhcCC---CcEEEEeCCC
Confidence 01222 46888899999999997443321 1122233666 7888877766
No 245
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=97.29 E-value=0.00033 Score=61.33 Aligned_cols=37 Identities=14% Similarity=-0.031 Sum_probs=32.7
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (303)
.++|.|+|+|.+|..++..|.+. | + |++++++++.++
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~-g-----~-v~vid~~~~~~~ 45 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGS-E-----V-FVLAEDENVRKK 45 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTS-E-----E-EEEESCGGGHHH
T ss_pred CCEEEEECCChHHHHHHHHHHhC-C-----e-EEEEECCHHHHH
Confidence 47899999999999999999888 7 8 999999987654
No 246
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=97.28 E-value=0.00033 Score=65.58 Aligned_cols=94 Identities=22% Similarity=0.212 Sum_probs=65.0
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
-++++|||.|.+|..+|..+..- | .+|..|++...... ..
T Consensus 141 g~tvGIiG~G~IG~~va~~~~~f-g-----~~v~~~d~~~~~~~----------------------------~~------ 180 (334)
T 3kb6_A 141 RLTLGVIGTGRIGSRVAMYGLAF-G-----MKVLCYDVVKREDL----------------------------KE------ 180 (334)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCHHH----------------------------HH------
T ss_pred CcEEEEECcchHHHHHHHhhccc-C-----ceeeecCCccchhh----------------------------hh------
Confidence 37899999999999999998876 7 89999998753210 00
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh-HHHHH-HHHHHHhhccCCCCEEEEeeccC
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE-TKEVF-EEISRYWKERITVPVIISLAKGV 200 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~-~~~vl-~~l~~~l~~~~~~~iivs~~nGi 200 (303)
..... .++++.++.||+|++.+|-.. ++.++ ++....+++ ++++|.+..|=
T Consensus 181 -----------------------~~~~~-~~l~ell~~sDivslh~Plt~~T~~li~~~~l~~mk~---~a~lIN~aRG~ 233 (334)
T 3kb6_A 181 -----------------------KGCVY-TSLDELLKESDVISLHVPYTKETHHMINEERISLMKD---GVYLINTARGK 233 (334)
T ss_dssp -----------------------TTCEE-CCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCT---TEEEEECSCGG
T ss_pred -----------------------cCcee-cCHHHHHhhCCEEEEcCCCChhhccCcCHHHHhhcCC---CeEEEecCccc
Confidence 01222 467888999999999998752 33322 222233666 78889888775
Q ss_pred ccc
Q 022050 201 EAE 203 (303)
Q Consensus 201 ~~~ 203 (303)
..+
T Consensus 234 iVd 236 (334)
T 3kb6_A 234 VVD 236 (334)
T ss_dssp GBC
T ss_pred ccc
Confidence 444
No 247
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=97.26 E-value=0.00021 Score=65.23 Aligned_cols=38 Identities=16% Similarity=0.076 Sum_probs=34.0
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCe-eEEEEecCCchhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVD 86 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~-~V~l~~r~~~~~~ 86 (303)
.+++.|+|+|.||.+++..|++. | . +|++++|++++.+
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~-G-----~~~v~v~~R~~~~a~ 155 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKI-V-----RPTLTVANRTMSRFN 155 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTT-C-----CSCCEEECSCGGGGT
T ss_pred CCEEEEECCcHHHHHHHHHHHHC-C-----CCEEEEEeCCHHHHH
Confidence 37899999999999999999998 8 6 8999999987654
No 248
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=97.25 E-value=0.00074 Score=64.66 Aligned_cols=40 Identities=15% Similarity=0.185 Sum_probs=29.3
Q ss_pred CceEEEECCCh---HHHHHHHHHHHhcCCCCCCeeEE--EEecCCchhhh
Q 022050 43 PLRIVGVGAGA---WGSVFTAMLQDSYGYLRDKVLIR--IWRRPGRSVDR 87 (303)
Q Consensus 43 ~~kI~VIGaG~---mG~aiA~~La~~~G~~~~~~~V~--l~~r~~~~~~~ 87 (303)
++||+|||+|. ||...+..+... + ..+++ ++++++++.++
T Consensus 37 ~~rvgiiG~G~~~~ig~~h~~~~~~~-~----~~~lva~v~d~~~~~a~~ 81 (417)
T 3v5n_A 37 RIRLGMVGGGSGAFIGAVHRIAARLD-D----HYELVAGALSSTPEKAEA 81 (417)
T ss_dssp CEEEEEESCC--CHHHHHHHHHHHHT-S----CEEEEEEECCSSHHHHHH
T ss_pred cceEEEEcCCCchHHHHHHHHHHhhC-C----CcEEEEEEeCCCHHHHHH
Confidence 47999999999 999988887765 4 15654 67888876543
No 249
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=97.22 E-value=0.0011 Score=62.08 Aligned_cols=92 Identities=23% Similarity=0.206 Sum_probs=59.1
Q ss_pred CceEEEECCChHHHH-HHHHHHHhcCCCCCCeeE-EEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhh
Q 022050 43 PLRIVGVGAGAWGSV-FTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (303)
Q Consensus 43 ~~kI~VIGaG~mG~a-iA~~La~~~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (303)
++||+|||+|.||.. .+..+....+ .+| -+++++++++.+ ..
T Consensus 5 ~~rvgiiG~G~~g~~~~~~~l~~~~~-----~~l~av~d~~~~~~~~-------------------------~~------ 48 (358)
T 3gdo_A 5 TIKVGILGYGLSGSVFHGPLLDVLDE-----YQISKIMTSRTEEVKR-------------------------DF------ 48 (358)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTTCTT-----EEEEEEECSCHHHHHH-------------------------HC------
T ss_pred cceEEEEccCHHHHHHHHHHHhhCCC-----eEEEEEEcCCHHHHHh-------------------------hC------
Confidence 489999999999996 5666654312 565 467887653210 00
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeec
Q 022050 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (303)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~--~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~n 198 (303)
+...+.+|.++.+. +.|+|++++|+....++..... .. +..|+ +-|
T Consensus 49 -------------------------~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al---~a---GkhVl-~EK 96 (358)
T 3gdo_A 49 -------------------------PDAEVVHELEEITNDPAIELVIVTTPSGLHYEHTMACI---QA---GKHVV-MEK 96 (358)
T ss_dssp -------------------------TTSEEESSTHHHHTCTTCCEEEECSCTTTHHHHHHHHH---HT---TCEEE-EES
T ss_pred -------------------------CCCceECCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHH---Hc---CCeEE-Eec
Confidence 12456678888776 6899999999987666655433 33 44444 456
Q ss_pred cCcc
Q 022050 199 GVEA 202 (303)
Q Consensus 199 Gi~~ 202 (303)
.+..
T Consensus 97 Pla~ 100 (358)
T 3gdo_A 97 PMTA 100 (358)
T ss_dssp SCCS
T ss_pred CCcC
Confidence 5544
No 250
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=97.21 E-value=0.0016 Score=63.15 Aligned_cols=50 Identities=18% Similarity=0.110 Sum_probs=38.6
Q ss_pred hhhhHHHHHhccCCCCCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 022050 27 ERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (303)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~ 83 (303)
.-++.++|..+..- .-++++|+|.|.+|..+|..+..- | .+|+++++++.
T Consensus 232 slvdgI~Ratg~~L-~GKTVgVIG~G~IGr~vA~~lraf-G-----a~Viv~d~dp~ 281 (464)
T 3n58_A 232 SLVDGIRRGTDVMM-AGKVAVVCGYGDVGKGSAQSLAGA-G-----ARVKVTEVDPI 281 (464)
T ss_dssp HHHHHHHHHHCCCC-TTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSHH
T ss_pred HHHHHHHHhcCCcc-cCCEEEEECcCHHHHHHHHHHHHC-C-----CEEEEEeCCcc
Confidence 33455666554333 338999999999999999999877 8 89999999874
No 251
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=97.18 E-value=0.0025 Score=58.31 Aligned_cols=94 Identities=18% Similarity=0.212 Sum_probs=67.1
Q ss_pred CCceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhh
Q 022050 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (303)
Q Consensus 42 ~~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (303)
+.+||+|+|+ |.||..++..+.+. | ++ .++..++.... ...
T Consensus 6 ~~~~VaVvGasG~~G~~~~~~l~~~-g-----~~-~v~~VnP~~~g-------------------------~~i------ 47 (288)
T 1oi7_A 6 RETRVLVQGITGREGQFHTKQMLTY-G-----TK-IVAGVTPGKGG-------------------------MEV------ 47 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHH-T-----CE-EEEEECTTCTT-------------------------CEE------
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHc-C-----Ce-EEEEECCCCCC-------------------------ceE------
Confidence 4589999999 99999999999887 8 66 34555553210 000
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeec
Q 022050 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (303)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~--~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~n 198 (303)
..+.+..+++++.+ ++|++++++|+....+++++.... . -..++..+.
T Consensus 48 -------------------------~G~~vy~sl~el~~~~~~Dv~Ii~vp~~~~~~~~~ea~~~-G----i~~vVi~t~ 97 (288)
T 1oi7_A 48 -------------------------LGVPVYDTVKEAVAHHEVDASIIFVPAPAAADAALEAAHA-G----IPLIVLITE 97 (288)
T ss_dssp -------------------------TTEEEESSHHHHHHHSCCSEEEECCCHHHHHHHHHHHHHT-T----CSEEEECCS
T ss_pred -------------------------CCEEeeCCHHHHhhcCCCCEEEEecCHHHHHHHHHHHHHC-C----CCEEEEECC
Confidence 13556677888777 899999999999999988886652 1 133666788
Q ss_pred cCccc
Q 022050 199 GVEAE 203 (303)
Q Consensus 199 Gi~~~ 203 (303)
|+...
T Consensus 98 G~~~~ 102 (288)
T 1oi7_A 98 GIPTL 102 (288)
T ss_dssp CCCHH
T ss_pred CCCHH
Confidence 88653
No 252
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=97.17 E-value=0.00087 Score=63.61 Aligned_cols=40 Identities=15% Similarity=0.218 Sum_probs=30.4
Q ss_pred CceEEEECCCh---HHHHHHHHHHHhcCCCCCCeeEE--EEecCCchhhh
Q 022050 43 PLRIVGVGAGA---WGSVFTAMLQDSYGYLRDKVLIR--IWRRPGRSVDR 87 (303)
Q Consensus 43 ~~kI~VIGaG~---mG~aiA~~La~~~G~~~~~~~V~--l~~r~~~~~~~ 87 (303)
++||+|||+|. ||...+..+... + ..+++ ++++++++.++
T Consensus 12 ~~rvgiiG~G~~~~ig~~h~~~~~~~-~----~~~lva~v~d~~~~~a~~ 56 (398)
T 3dty_A 12 PIRWAMVGGGSQSQIGYIHRCAALRD-N----TFVLVAGAFDIDPIRGSA 56 (398)
T ss_dssp CEEEEEEECCTTCSSHHHHHHHHHGG-G----SEEEEEEECCSSHHHHHH
T ss_pred cceEEEEcCCccchhHHHHHHHHhhC-C----CeEEEEEEeCCCHHHHHH
Confidence 47999999999 999998888766 4 15665 56888876543
No 253
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=97.17 E-value=0.003 Score=58.06 Aligned_cols=94 Identities=11% Similarity=-0.012 Sum_probs=62.6
Q ss_pred CCceEEEECC-ChHHHHHHHHHHHhcCCCCCCee-EEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhh
Q 022050 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (303)
Q Consensus 42 ~~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~-V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~ 119 (303)
.|+||+|||+ |.||...+..+... + .+ |.++|++++.... . + ..
T Consensus 2 ~mirvgiIG~gG~i~~~h~~~l~~~-~-----~~lvav~d~~~~~~~~-~---------~-------------~~----- 47 (312)
T 3o9z_A 2 HMTRFALTGLAGYIAPRHLKAIKEV-G-----GVLVASLDPATNVGLV-D---------S-------------FF----- 47 (312)
T ss_dssp -CCEEEEECTTSSSHHHHHHHHHHT-T-----CEEEEEECSSCCCGGG-G---------G-------------TC-----
T ss_pred CceEEEEECCChHHHHHHHHHHHhC-C-----CEEEEEEcCCHHHHHH-H---------h-------------hC-----
Confidence 4789999999 78999999999887 6 44 5678888764210 0 0 00
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHh----------cCCCEEEEecCchhHHHHHHHHHHHhhccCC
Q 022050 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAV----------WDADIVINGLPSTETKEVFEEISRYWKERIT 189 (303)
Q Consensus 120 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~----------~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~ 189 (303)
+..++.+|.++.+ .+.|+|++++|+....++..+... .
T Consensus 48 --------------------------~~~~~~~~~~~ll~~~~~l~~~~~~vD~V~I~tP~~~H~~~~~~al~---a--- 95 (312)
T 3o9z_A 48 --------------------------PEAEFFTEPEAFEAYLEDLRDRGEGVDYLSIASPNHLHYPQIRMALR---L--- 95 (312)
T ss_dssp --------------------------TTCEEESCHHHHHHHHHHHHHTTCCCSEEEECSCGGGHHHHHHHHHH---T---
T ss_pred --------------------------CCCceeCCHHHHHHHhhhhcccCCCCcEEEECCCchhhHHHHHHHHH---C---
Confidence 1345566777655 578999999999877666655433 2
Q ss_pred CCEEEEeeccCcc
Q 022050 190 VPVIISLAKGVEA 202 (303)
Q Consensus 190 ~~iivs~~nGi~~ 202 (303)
+..|+ +-|.+..
T Consensus 96 GkhVl-~EKPla~ 107 (312)
T 3o9z_A 96 GANAL-SEKPLVL 107 (312)
T ss_dssp TCEEE-ECSSSCS
T ss_pred CCeEE-EECCCCC
Confidence 44443 5565554
No 254
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=97.17 E-value=0.0024 Score=61.53 Aligned_cols=84 Identities=21% Similarity=0.123 Sum_probs=55.9
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeE-EEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
++||+|||+|.||...+..+....+ .+| -++++++++++++.+. +...
T Consensus 20 ~~rvgiIG~G~~g~~h~~~l~~~~~-----~~lvav~d~~~~~~~~~a~~----------------------~~~~---- 68 (444)
T 2ixa_A 20 KVRIAFIAVGLRGQTHVENMARRDD-----VEIVAFADPDPYMVGRAQEI----------------------LKKN---- 68 (444)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCTT-----EEEEEEECSCHHHHHHHHHH----------------------HHHT----
T ss_pred CceEEEEecCHHHHHHHHHHHhCCC-----cEEEEEEeCCHHHHHHHHHH----------------------HHhc----
Confidence 4799999999999999888876413 564 5789988765432110 0000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEec----CHHHHhc--CCCEEEEecCchhHHHHHHH
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVT----NLQEAVW--DADIVINGLPSTETKEVFEE 179 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~----d~~~a~~--~aDlVIiaVp~~~~~~vl~~ 179 (303)
.+ +...+.+ |.++.++ +.|+|++++|.....++..+
T Consensus 69 ---g~-------------------~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~h~~~~~~ 110 (444)
T 2ixa_A 69 ---GK-------------------KPAKVFGNGNDDYKNMLKDKNIDAVFVSSPWEWHHEHGVA 110 (444)
T ss_dssp ---TC-------------------CCCEEECSSTTTHHHHTTCTTCCEEEECCCGGGHHHHHHH
T ss_pred ---CC-------------------CCCceeccCCCCHHHHhcCCCCCEEEEcCCcHHHHHHHHH
Confidence 00 0234455 8888776 58999999999876655554
No 255
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=97.14 E-value=0.0017 Score=60.70 Aligned_cols=40 Identities=13% Similarity=0.312 Sum_probs=31.3
Q ss_pred CCceEEEEC-CChHHHHHHHHHHHhcCCCC--CCeeEEEEecCC
Q 022050 42 DPLRIVGVG-AGAWGSVFTAMLQDSYGYLR--DKVLIRIWRRPG 82 (303)
Q Consensus 42 ~~~kI~VIG-aG~mG~aiA~~La~~~G~~~--~~~~V~l~~r~~ 82 (303)
.++||+|+| +|.+|+.+|..|+.. |.+. ....+.|+|+++
T Consensus 2 ~~~kV~V~GaaG~VG~~la~~L~~~-~~~~e~~~~~l~L~Di~~ 44 (333)
T 5mdh_A 2 EPIRVLVTGAAGQIAYSLLYSIGNG-SVFGKDQPIILVLLDITP 44 (333)
T ss_dssp CCEEEEESSTTSHHHHTTHHHHHTT-TTTCTTCCEEEEEECCGG
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhC-CCccccCCCEEEEEeCCC
Confidence 468999999 799999999999987 6431 112489999975
No 256
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.14 E-value=0.0017 Score=59.32 Aligned_cols=40 Identities=23% Similarity=0.264 Sum_probs=35.1
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCe-eEEEEecCCchhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVDR 87 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~-~V~l~~r~~~~~~~ 87 (303)
..+++.|+|+|.+|.+++..|++. | . +|++++|++++.++
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~-G-----~~~v~i~~R~~~~a~~ 166 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTH-G-----VQKLQVADLDTSRAQA 166 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHT-T-----CSEEEEECSSHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC-C-----CCEEEEEECCHHHHHH
Confidence 347899999999999999999998 8 5 79999999887654
No 257
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=97.14 E-value=0.00061 Score=65.83 Aligned_cols=52 Identities=23% Similarity=0.212 Sum_probs=39.8
Q ss_pred hhhhhHHHHHhccCCCCCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCch
Q 022050 26 EERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (303)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (303)
+.-++-+++..+..- .-++|+|+|+|.+|..+|..+... | .+|+++++++..
T Consensus 204 ~s~~~gi~rat~~~L-~GktV~ViG~G~IGk~vA~~Lra~-G-----a~Viv~D~dp~r 255 (435)
T 3gvp_A 204 ESILDGLKRTTDMMF-GGKQVVVCGYGEVGKGCCAALKAM-G-----SIVYVTEIDPIC 255 (435)
T ss_dssp HHHHHHHHHHHCCCC-TTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHH
T ss_pred HHHHHHHHHhhCcee-cCCEEEEEeeCHHHHHHHHHHHHC-C-----CEEEEEeCChhh
Confidence 445566666544332 237999999999999999999887 8 789999998753
No 258
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.13 E-value=0.0013 Score=64.26 Aligned_cols=40 Identities=10% Similarity=0.104 Sum_probs=33.8
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
++||+|+|+|.+|.+++..|++. + +++|++++|+++++++
T Consensus 23 ~k~VlIiGAGgiG~aia~~L~~~-~----g~~V~v~~R~~~ka~~ 62 (467)
T 2axq_A 23 GKNVLLLGSGFVAQPVIDTLAAN-D----DINVTVACRTLANAQA 62 (467)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTS-T----TEEEEEEESSHHHHHH
T ss_pred CCEEEEECChHHHHHHHHHHHhC-C----CCeEEEEECCHHHHHH
Confidence 47899999999999999999986 4 2789999999876543
No 259
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=97.11 E-value=0.001 Score=63.65 Aligned_cols=37 Identities=27% Similarity=0.360 Sum_probs=33.3
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCe-eEEEEecCCchh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSV 85 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~-~V~l~~r~~~~~ 85 (303)
-++|+|+|+|.||.+++..+... | . +|++++|++++.
T Consensus 167 g~~VlIiGaG~iG~~~a~~l~~~-G-----~~~V~v~~r~~~ra 204 (404)
T 1gpj_A 167 DKTVLVVGAGEMGKTVAKSLVDR-G-----VRAVLVANRTYERA 204 (404)
T ss_dssp TCEEEEESCCHHHHHHHHHHHHH-C-----CSEEEEECSSHHHH
T ss_pred CCEEEEEChHHHHHHHHHHHHHC-C-----CCEEEEEeCCHHHH
Confidence 47999999999999999999988 8 6 899999998654
No 260
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=97.11 E-value=0.0011 Score=60.15 Aligned_cols=66 Identities=15% Similarity=0.307 Sum_probs=46.1
Q ss_pred cCcceeccCCchhhhhhHHHHHhccCCCCCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 14 SNGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
.+|-++.+|-.-.--...|++ .+.. ..+++.|+|+|.+|.+++..|+.. |. .+|++|+|+.++.++
T Consensus 93 ~~g~l~g~NTD~~G~~~~l~~-~~~~--~~~~vlvlGaGgaarav~~~L~~~-G~----~~i~v~nRt~~ka~~ 158 (271)
T 1npy_A 93 DNGFLRAYNTDYIAIVKLIEK-YHLN--KNAKVIVHGSGGMAKAVVAAFKNS-GF----EKLKIYARNVKTGQY 158 (271)
T ss_dssp ETTEEEEECHHHHHHHHHHHH-TTCC--TTSCEEEECSSTTHHHHHHHHHHT-TC----CCEEEECSCHHHHHH
T ss_pred cCCEEEeecCCHHHHHHHHHH-hCCC--CCCEEEEECCcHHHHHHHHHHHHC-CC----CEEEEEeCCHHHHHH
Confidence 356555555544444444444 2222 237899999999999999999998 81 379999999876543
No 261
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=97.11 E-value=0.0037 Score=57.63 Aligned_cols=37 Identities=14% Similarity=0.177 Sum_probs=29.8
Q ss_pred CCceEEEECC-ChHHHHHHHHHHHhcCCCCCCee-EEEEecCCch
Q 022050 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGRS 84 (303)
Q Consensus 42 ~~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~-V~l~~r~~~~ 84 (303)
.|+||+|||+ |.||...+..+... + .+ |-++|++++.
T Consensus 2 ~mirvgiIG~gG~i~~~h~~~l~~~-~-----~~lvav~d~~~~~ 40 (318)
T 3oa2_A 2 HMKNFALIGAAGYIAPRHMRAIKDT-G-----NCLVSAYDINDSV 40 (318)
T ss_dssp -CCEEEEETTTSSSHHHHHHHHHHT-T-----CEEEEEECSSCCC
T ss_pred CceEEEEECCCcHHHHHHHHHHHhC-C-----CEEEEEEcCCHHH
Confidence 4789999999 78999999999887 6 44 5678888764
No 262
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=97.08 E-value=0.0037 Score=57.43 Aligned_cols=100 Identities=14% Similarity=0.159 Sum_probs=68.0
Q ss_pred hccCCCCCceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccc
Q 022050 36 MGKAEGDPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYL 114 (303)
Q Consensus 36 ~~~~~~~~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l 114 (303)
|...-....+++|+|+ |.||..++..+.+. | ++ .++..++..... ..
T Consensus 6 ~~~l~~~~~~vvV~Gasg~~G~~~~~~l~~~-g-----~~-~v~~VnP~~~g~-------------------------~i 53 (297)
T 2yv2_A 6 MAVLVDSETRVLVQGITGREGSFHAKAMLEY-G-----TK-VVAGVTPGKGGS-------------------------EV 53 (297)
T ss_dssp ---CCSTTCEEEEETTTSHHHHHHHHHHHHH-T-----CE-EEEEECTTCTTC-------------------------EE
T ss_pred hhHhhCCCCEEEEECCCCCHHHHHHHHHHhC-C-----Cc-EEEEeCCCCCCc-------------------------eE
Confidence 3333345578999999 99999999999887 8 66 455555532100 00
Q ss_pred hhhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--C-CCEEEEecCchhHHHHHHHHHHHhhccCCCC
Q 022050 115 KYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--D-ADIVINGLPSTETKEVFEEISRYWKERITVP 191 (303)
Q Consensus 115 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~--~-aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~ 191 (303)
..+.+..+++++.+ . +|++++++|+....+++++.... . -.
T Consensus 54 -------------------------------~G~~vy~sl~el~~~~~~~DvaIi~vp~~~~~~~v~ea~~~-G----i~ 97 (297)
T 2yv2_A 54 -------------------------------HGVPVYDSVKEALAEHPEINTSIVFVPAPFAPDAVYEAVDA-G----IR 97 (297)
T ss_dssp -------------------------------TTEEEESSHHHHHHHCTTCCEEEECCCGGGHHHHHHHHHHT-T----CS
T ss_pred -------------------------------CCEeeeCCHHHHhhcCCCCCEEEEecCHHHHHHHHHHHHHC-C----CC
Confidence 13556677887765 4 99999999999999988887653 1 23
Q ss_pred EEEEeeccCccc
Q 022050 192 VIISLAKGVEAE 203 (303)
Q Consensus 192 iivs~~nGi~~~ 203 (303)
.++..+.|+...
T Consensus 98 ~vVi~t~G~~~~ 109 (297)
T 2yv2_A 98 LVVVITEGIPVH 109 (297)
T ss_dssp EEEECCCCCCHH
T ss_pred EEEEECCCCCHH
Confidence 366678888653
No 263
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=97.07 E-value=0.0016 Score=60.31 Aligned_cols=87 Identities=16% Similarity=0.111 Sum_probs=57.7
Q ss_pred CceEEEECCChHHH-HHHHHHHHhcCCCCCCeeE-EEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhh
Q 022050 43 PLRIVGVGAGAWGS-VFTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (303)
Q Consensus 43 ~~kI~VIGaG~mG~-aiA~~La~~~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (303)
++||+|||+|.||. ..+..+....+ .+| -++++++++.
T Consensus 25 ~~rvgiiG~G~ig~~~~~~~l~~~~~-----~~lvav~d~~~~~~----------------------------------- 64 (330)
T 4ew6_A 25 PINLAIVGVGKIVRDQHLPSIAKNAN-----FKLVATASRHGTVE----------------------------------- 64 (330)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHHCTT-----EEEEEEECSSCCCT-----------------------------------
T ss_pred CceEEEEecCHHHHHHHHHHHHhCCC-----eEEEEEEeCChhhc-----------------------------------
Confidence 48999999999998 68888876512 554 4567765310
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc---CCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEee
Q 022050 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW---DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (303)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~---~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~ 197 (303)
++...+|.++.++ +.|+|++++|+....++..+.. .. +..|+ +-
T Consensus 65 --------------------------g~~~~~~~~~ll~~~~~vD~V~i~tp~~~H~~~~~~al---~a---GkhVl-~E 111 (330)
T 4ew6_A 65 --------------------------GVNSYTTIEAMLDAEPSIDAVSLCMPPQYRYEAAYKAL---VA---GKHVF-LE 111 (330)
T ss_dssp --------------------------TSEEESSHHHHHHHCTTCCEEEECSCHHHHHHHHHHHH---HT---TCEEE-EC
T ss_pred --------------------------CCCccCCHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHH---Hc---CCcEE-Ee
Confidence 2335567777664 4899999999987766655543 33 44444 55
Q ss_pred ccCcc
Q 022050 198 KGVEA 202 (303)
Q Consensus 198 nGi~~ 202 (303)
|.+..
T Consensus 112 KP~a~ 116 (330)
T 4ew6_A 112 KPPGA 116 (330)
T ss_dssp SSSCS
T ss_pred CCCCC
Confidence 65544
No 264
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=97.07 E-value=0.00098 Score=63.96 Aligned_cols=39 Identities=18% Similarity=0.185 Sum_probs=34.6
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
..||+|+|+|.+|...+..+... | .+|++||+++++++.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~l-G-----a~V~v~D~~~~~l~~ 228 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRL-G-----AVVSATDVRPAAKEQ 228 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSTTHHHH
T ss_pred CCEEEEECCcHHHHHHHHHHHHC-C-----CEEEEEcCCHHHHHH
Confidence 47999999999999999998887 8 899999999986654
No 265
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=97.04 E-value=0.0024 Score=59.43 Aligned_cols=49 Identities=12% Similarity=0.164 Sum_probs=32.3
Q ss_pred CeEEecCHHHHhcC--CCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeeccCcc
Q 022050 147 PLKVVTNLQEAVWD--ADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (303)
Q Consensus 147 ~i~~t~d~~~a~~~--aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nGi~~ 202 (303)
.+.+.+|.++.+.+ .|+|++++|+....++..+.. .. +..|+ +-|.+..
T Consensus 50 ~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al---~a---Gk~Vl-~EKP~a~ 100 (349)
T 3i23_A 50 GVNFTADLNELLTDPEIELITICTPAHTHYDLAKQAI---LA---GKSVI-VEKPFCD 100 (349)
T ss_dssp TCEEESCTHHHHSCTTCCEEEECSCGGGHHHHHHHHH---HT---TCEEE-ECSCSCS
T ss_pred CCeEECCHHHHhcCCCCCEEEEeCCcHHHHHHHHHHH---Hc---CCEEE-EECCCcC
Confidence 35567788887765 899999999987766655443 33 44444 3555543
No 266
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=97.02 E-value=0.0051 Score=59.72 Aligned_cols=53 Identities=23% Similarity=0.270 Sum_probs=36.5
Q ss_pred hhhhhhHHHHHhccCCCCCceEEEECCChHHHHHHHHHHHhcCCCCCCee-EEEEecCCchhhh
Q 022050 25 LEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGRSVDR 87 (303)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~-V~l~~r~~~~~~~ 87 (303)
|-++|++.... .++.||+|||+|.||..++..+....+ .+ +-++|+++++.++
T Consensus 10 l~~~l~~r~~~-----~k~IRVGIIGaG~iG~~~~~~l~~~~~-----veLvAV~D~~~era~~ 63 (446)
T 3upl_A 10 LARDLAARAET-----GKPIRIGLIGAGEMGTDIVTQVARMQG-----IEVGALSARRLPNTFK 63 (446)
T ss_dssp HHHHHHHHHHT-----TCCEEEEEECCSHHHHHHHHHHTTSSS-----EEEEEEECSSTHHHHH
T ss_pred HHHHHHHHHhc-----CCceEEEEECChHHHHHHHHHHhhCCC-----cEEEEEEeCCHHHHHH
Confidence 45555544332 245899999999999999988865412 44 4577888876653
No 267
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=97.01 E-value=0.0015 Score=62.93 Aligned_cols=82 Identities=13% Similarity=0.117 Sum_probs=56.4
Q ss_pred CceEEEECC----ChHHHHHHHHHHHh-cCCCCCCeeE-EEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchh
Q 022050 43 PLRIVGVGA----GAWGSVFTAMLQDS-YGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKY 116 (303)
Q Consensus 43 ~~kI~VIGa----G~mG~aiA~~La~~-~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~ 116 (303)
++||+|||+ |.||...+..|.+. .+ .++ -++++++++.+++.++ . +
T Consensus 20 ~irvgiIG~g~~gG~~g~~~~~~l~~~~~~-----~~lvav~d~~~~~~~~~a~~----------------------~-g 71 (438)
T 3btv_A 20 PIRVGFVGLNAAKGWAIKTHYPAILQLSSQ-----FQITALYSPKIETSIATIQR----------------------L-K 71 (438)
T ss_dssp CEEEEEESCCTTSSSTTTTHHHHHHHTTTT-----EEEEEEECSSHHHHHHHHHH----------------------T-T
T ss_pred CCEEEEEcccCCCChHHHHHHHHHHhcCCC-----eEEEEEEeCCHHHHHHHHHH----------------------c-C
Confidence 489999999 99999999988764 23 565 5789887755431100 0 0
Q ss_pred hhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHH
Q 022050 117 VEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEI 180 (303)
Q Consensus 117 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~--~aDlVIiaVp~~~~~~vl~~l 180 (303)
. +...+.+|.++.+. +.|+|++++|.....+++...
T Consensus 72 ~----------------------------~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~a 109 (438)
T 3btv_A 72 L----------------------------SNATAFPTLESFASSSTIDMIVIAIQVASHYEVVMPL 109 (438)
T ss_dssp C----------------------------TTCEEESSHHHHHHCSSCSEEEECSCHHHHHHHHHHH
T ss_pred C----------------------------CcceeeCCHHHHhcCCCCCEEEEeCCcHHHHHHHHHH
Confidence 0 12346678888775 689999999998766555543
No 268
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=96.98 E-value=0.0037 Score=58.10 Aligned_cols=99 Identities=11% Similarity=0.053 Sum_probs=57.6
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCC--CCCee-EEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhh
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYL--RDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~--~~~~~-V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (303)
-||+|||+|.||..-+..+......+ .+..+ |-++|+++++++++.+ .+
T Consensus 26 irvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~-------------------------~~--- 77 (393)
T 4fb5_A 26 LGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAG-------------------------EF--- 77 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHH-------------------------HH---
T ss_pred ccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHH-------------------------Hh---
Confidence 58999999999987766553320000 00134 4578999876653211 00
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeec
Q 022050 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (303)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~--~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~n 198 (303)
.-.++.+|.++.++ +.|+|++|+|+..-.++..+... . +..| -+-|
T Consensus 78 -------------------------g~~~~y~d~~ell~~~~iDaV~IatP~~~H~~~a~~al~---a---GkhV-l~EK 125 (393)
T 4fb5_A 78 -------------------------GFEKATADWRALIADPEVDVVSVTTPNQFHAEMAIAALE---A---GKHV-WCEK 125 (393)
T ss_dssp -------------------------TCSEEESCHHHHHHCTTCCEEEECSCGGGHHHHHHHHHH---T---TCEE-EECS
T ss_pred -------------------------CCCeecCCHHHHhcCCCCcEEEECCChHHHHHHHHHHHh---c---CCeE-EEcc
Confidence 01245678888765 57999999999876665554332 2 3333 3566
Q ss_pred cCcc
Q 022050 199 GVEA 202 (303)
Q Consensus 199 Gi~~ 202 (303)
.+..
T Consensus 126 Pla~ 129 (393)
T 4fb5_A 126 PMAP 129 (393)
T ss_dssp CSCS
T ss_pred CCcc
Confidence 6554
No 269
>3h2z_A Mannitol-1-phosphate 5-dehydrogenase; PSI- protein structure initiative, structural genomics, midwest for structural genomics (MCSG); 1.90A {Shigella flexneri 2a str}
Probab=96.97 E-value=0.00061 Score=64.96 Aligned_cols=117 Identities=17% Similarity=0.260 Sum_probs=73.1
Q ss_pred ceEEEECCChHHHHHHH-HHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhhc
Q 022050 44 LRIVGVGAGAWGSVFTA-MLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~-~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~~ 122 (303)
||+..+|+|++|.++.. .|.++ | ++|++.++++..++++|+++++.+.- .+..
T Consensus 1 mkavhfGaGniGRGfig~~l~~~-g-----~~v~f~dv~~~~i~~Ln~~~~Y~V~~----------------~g~~---- 54 (382)
T 3h2z_A 1 MKALHFGAGNIGRGFIGKLLADA-G-----IQLTFADVNQVVLDALNARHSYQVHV----------------VGET---- 54 (382)
T ss_dssp CEEEEECCSHHHHHTHHHHHHHT-T-----CEEEEEESCHHHHHHHHHHSEEEEEE----------------ESSS----
T ss_pred CcEEEECCCccchhhHHHHHHHc-C-----CeEEEEeCCHHHHHHHhcCCCEEEEE----------------ccCC----
Confidence 89999999999966554 56666 8 89999999998888877654321110 0000
Q ss_pred CCcccchhhhhccccccCCCCCCCCeEEe-c---CHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhcc----C-CCCEE
Q 022050 123 DRTLHADEILKDGFCLNMIDTPLCPLKVV-T---NLQEAVWDADIVINGLPSTETKEVFEEISRYWKER----I-TVPVI 193 (303)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t-~---d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~----~-~~~ii 193 (303)
. .. + . ..++++. + +.-+++.++|+|..++.+...+.+...|...+..+ . +.-.|
T Consensus 55 ~-~~---~------~-------v~~v~ai~s~~~~~~~~i~~adlitT~vG~~~l~~i~~~l~~~L~~R~~~~~~~plti 117 (382)
T 3h2z_A 55 E-QV---D------T-------VSGVNAVSSIGDDVVDLIAQVDLVTTAVGPVVLERIAPAIAKGLVKRKEQGNESPLNI 117 (382)
T ss_dssp E-EE---E------E-------EESCEEEETTSSHHHHHHTTCSEEEECCCHHHHHHTHHHHHHHHHHHHHHTCCSCEEE
T ss_pred c-ce---E------E-------EEEEEEEeCcHHHHHHHHcCCCEEEECCCcccHHHHHHHHHHHHHHHHHcCCCCCcEE
Confidence 0 00 0 0 0133332 1 23345679999999999988777777766555321 1 13457
Q ss_pred EEeeccCccc
Q 022050 194 ISLAKGVEAE 203 (303)
Q Consensus 194 vs~~nGi~~~ 203 (303)
+|+-|-..++
T Consensus 118 lsCeN~~~ng 127 (382)
T 3h2z_A 118 IACENMVRGT 127 (382)
T ss_dssp EECCSSTTHH
T ss_pred EECCCccchH
Confidence 8888776654
No 270
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=96.97 E-value=0.0044 Score=57.07 Aligned_cols=36 Identities=19% Similarity=0.328 Sum_probs=30.0
Q ss_pred ceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEec--CCc
Q 022050 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRR--PGR 83 (303)
Q Consensus 44 ~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r--~~~ 83 (303)
|||+|+|+ |.+|+.++..|+.. |.. .++.++|+ +++
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~-~~~---~el~L~Di~~~~~ 39 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKE-PFM---KDLVLIGREHSIN 39 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTC-TTC---CEEEEEECGGGHH
T ss_pred CEEEEECCCChhHHHHHHHHHhC-CCC---CEEEEEcCCCchh
Confidence 79999999 99999999999887 621 36899998 544
No 271
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=96.97 E-value=0.0077 Score=55.50 Aligned_cols=93 Identities=17% Similarity=0.182 Sum_probs=66.5
Q ss_pred CCceEEEE-CC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhh
Q 022050 42 DPLRIVGV-GA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (303)
Q Consensus 42 ~~~kI~VI-Ga-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~ 119 (303)
.+.+++|| |+ |.+|...+..|.+. | ++ .++..++..... ..
T Consensus 12 ~~~siaVV~Gasg~~G~~~~~~l~~~-G-----~~-~v~~VnP~~~g~-------------------------~i----- 54 (305)
T 2fp4_A 12 DKNTKVICQGFTGKQGTFHSQQALEY-G-----TN-LVGGTTPGKGGK-------------------------TH----- 54 (305)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHH-T-----CE-EEEEECTTCTTC-------------------------EE-----
T ss_pred CCCcEEEEECCCCCHHHHHHHHHHHC-C-----Cc-EEEEeCCCcCcc-------------------------eE-----
Confidence 34678888 99 99999999999888 8 67 455666542100 00
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEee
Q 022050 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (303)
Q Consensus 120 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~--~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~ 197 (303)
..+.+..+++++.+ +.|+++++||+....++++++... . -..++.++
T Consensus 55 --------------------------~G~~vy~sl~el~~~~~vD~avI~vP~~~~~~~~~e~i~~-G----i~~iv~~t 103 (305)
T 2fp4_A 55 --------------------------LGLPVFNTVKEAKEQTGATASVIYVPPPFAAAAINEAIDA-E----VPLVVCIT 103 (305)
T ss_dssp --------------------------TTEEEESSHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHT-T----CSEEEECC
T ss_pred --------------------------CCeeeechHHHhhhcCCCCEEEEecCHHHHHHHHHHHHHC-C----CCEEEEEC
Confidence 13556667888777 899999999999999999887653 1 13556788
Q ss_pred ccCcc
Q 022050 198 KGVEA 202 (303)
Q Consensus 198 nGi~~ 202 (303)
.|+..
T Consensus 104 ~G~~~ 108 (305)
T 2fp4_A 104 EGIPQ 108 (305)
T ss_dssp CCCCH
T ss_pred CCCCh
Confidence 88864
No 272
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=96.97 E-value=0.0013 Score=62.94 Aligned_cols=42 Identities=17% Similarity=0.203 Sum_probs=34.0
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
|+||+|+|+|.+|..++..|++. |.+. .+|.+++|+++++++
T Consensus 1 M~kVlIiGaGgiG~~ia~~L~~~-g~~~--~~V~v~~r~~~~~~~ 42 (405)
T 4ina_A 1 MAKVLQIGAGGVGGVVAHKMAMN-REVF--SHITLASRTLSKCQE 42 (405)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTC-TTTC--CEEEEEESCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCCc--eEEEEEECCHHHHHH
Confidence 47999999999999999999987 6100 279999999887654
No 273
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=96.96 E-value=0.00082 Score=63.70 Aligned_cols=39 Identities=18% Similarity=0.279 Sum_probs=34.4
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (303)
..++|+|+|+|.+|.+++..+... | .+|+++++++++++
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~-G-----a~V~~~d~~~~~l~ 205 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGM-G-----ATVTVLDINIDKLR 205 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-C-----CEEEEEeCCHHHHH
Confidence 358999999999999999999887 8 79999999987654
No 274
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=96.94 E-value=0.0027 Score=57.24 Aligned_cols=40 Identities=15% Similarity=0.034 Sum_probs=35.5
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
..++++|+|+|.||.+++..|++. | .+|++|+|+++++++
T Consensus 118 ~~~~vlvlGaGg~g~a~a~~L~~~-G-----~~v~v~~R~~~~a~~ 157 (272)
T 1p77_A 118 PNQHVLILGAGGATKGVLLPLLQA-Q-----QNIVLANRTFSKTKE 157 (272)
T ss_dssp TTCEEEEECCSHHHHTTHHHHHHT-T-----CEEEEEESSHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC-C-----CEEEEEECCHHHHHH
Confidence 347999999999999999999998 8 899999999876654
No 275
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=96.93 E-value=0.00089 Score=63.50 Aligned_cols=72 Identities=14% Similarity=0.140 Sum_probs=47.4
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEE-EEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (303)
.+.||+|||+| ||...+..+++. . ++.++. ++++++++.+++.+ .
T Consensus 6 ~~~rv~VvG~G-~g~~h~~a~~~~-~---~~~elvav~~~~~~~a~~~a~-------------------------~---- 51 (372)
T 4gmf_A 6 PKQRVLIVGAK-FGEMYLNAFMQP-P---EGLELVGLLAQGSARSRELAH-------------------------A---- 51 (372)
T ss_dssp -CEEEEEECST-TTHHHHHTTSSC-C---TTEEEEEEECCSSHHHHHHHH-------------------------H----
T ss_pred CCCEEEEEehH-HHHHHHHHHHhC-C---CCeEEEEEECCCHHHHHHHHH-------------------------H----
Confidence 45899999999 898877766553 1 114544 78998876543210 0
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchh
Q 022050 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE 172 (303)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~ 172 (303)
.++...+|.++.+.+.|++++++|...
T Consensus 52 -------------------------~gv~~~~~~~~l~~~~D~v~i~~p~~~ 78 (372)
T 4gmf_A 52 -------------------------FGIPLYTSPEQITGMPDIACIVVRSTV 78 (372)
T ss_dssp -------------------------TTCCEESSGGGCCSCCSEEEECCC--C
T ss_pred -------------------------hCCCEECCHHHHhcCCCEEEEECCCcc
Confidence 023456778887888999999998864
No 276
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=96.93 E-value=0.0029 Score=61.77 Aligned_cols=83 Identities=17% Similarity=0.167 Sum_probs=56.8
Q ss_pred CCceEEEECC----ChHHHHHHHHHHHh-cCCCCCCeeE-EEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccch
Q 022050 42 DPLRIVGVGA----GAWGSVFTAMLQDS-YGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLK 115 (303)
Q Consensus 42 ~~~kI~VIGa----G~mG~aiA~~La~~-~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~ 115 (303)
.++||+|||+ |.||...+..|... .+ .+| -++++++++.+++.++ +
T Consensus 38 ~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~-----~~lvav~d~~~~~a~~~a~~---------------------~-- 89 (479)
T 2nvw_A 38 RPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQ-----FQIVALYNPTLKSSLQTIEQ---------------------L-- 89 (479)
T ss_dssp CCEEEEEECCCSTTSHHHHTHHHHHHHTTTT-----EEEEEEECSCHHHHHHHHHH---------------------T--
T ss_pred CcCEEEEEcccCCCCHHHHHHHHHHHhcCCC-----eEEEEEEeCCHHHHHHHHHH---------------------c--
Confidence 3579999999 99999999988763 14 565 4789887755431100 0
Q ss_pred hhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHH
Q 022050 116 YVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEI 180 (303)
Q Consensus 116 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~--~aDlVIiaVp~~~~~~vl~~l 180 (303)
+. +...+.+|.++.++ +.|+|++++|.....+++...
T Consensus 90 g~----------------------------~~~~~~~d~~ell~~~~vD~V~I~tp~~~H~~~~~~a 128 (479)
T 2nvw_A 90 QL----------------------------KHATGFDSLESFAQYKDIDMIVVSVKVPEHYEVVKNI 128 (479)
T ss_dssp TC----------------------------TTCEEESCHHHHHHCTTCSEEEECSCHHHHHHHHHHH
T ss_pred CC----------------------------CcceeeCCHHHHhcCCCCCEEEEcCCcHHHHHHHHHH
Confidence 00 12346678888774 689999999998766555543
No 277
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=96.91 E-value=0.0049 Score=56.48 Aligned_cols=94 Identities=17% Similarity=0.199 Sum_probs=67.5
Q ss_pred CCceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhh
Q 022050 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (303)
Q Consensus 42 ~~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (303)
...+++|+|+ |.||..++..+.+. | ++ .++..++..... ..
T Consensus 12 ~~~~v~V~Gasg~~G~~~~~~l~~~-g-----~~-~V~~VnP~~~g~-------------------------~i------ 53 (294)
T 2yv1_A 12 ENTKAIVQGITGRQGSFHTKKMLEC-G-----TK-IVGGVTPGKGGQ-------------------------NV------ 53 (294)
T ss_dssp TTCCEEEETTTSHHHHHHHHHHHHT-T-----CC-EEEEECTTCTTC-------------------------EE------
T ss_pred CCCEEEEECCCCCHHHHHHHHHHhC-C-----Ce-EEEEeCCCCCCc-------------------------eE------
Confidence 4478899999 99999999999887 7 66 556666542100 00
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeec
Q 022050 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (303)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~--~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~n 198 (303)
..+.+..+++++.+ ++|++++++|+....+++++.... . -..++..+.
T Consensus 54 -------------------------~G~~vy~sl~el~~~~~~Dv~ii~vp~~~~~~~v~ea~~~-G----i~~vVi~t~ 103 (294)
T 2yv1_A 54 -------------------------HGVPVFDTVKEAVKETDANASVIFVPAPFAKDAVFEAIDA-G----IELIVVITE 103 (294)
T ss_dssp -------------------------TTEEEESSHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHT-T----CSEEEECCS
T ss_pred -------------------------CCEeeeCCHHHHhhcCCCCEEEEccCHHHHHHHHHHHHHC-C----CCEEEEECC
Confidence 13556678888777 899999999999999888886653 1 234666788
Q ss_pred cCccc
Q 022050 199 GVEAE 203 (303)
Q Consensus 199 Gi~~~ 203 (303)
|+...
T Consensus 104 G~~~~ 108 (294)
T 2yv1_A 104 HIPVH 108 (294)
T ss_dssp CCCHH
T ss_pred CCCHH
Confidence 88653
No 278
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=96.91 E-value=0.0036 Score=58.16 Aligned_cols=99 Identities=14% Similarity=0.054 Sum_probs=60.8
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCC---CCCCeeE-EEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhh
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGY---LRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~---~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~ 119 (303)
-||+|||+|.||...+..+... .. +....+| -++|+++++++++.+ .+
T Consensus 7 lrvgiIG~G~ig~~h~~~~~~~-~~~~~~~~~~~l~av~d~~~~~a~~~a~-------------------------~~-- 58 (390)
T 4h3v_A 7 LGIGLIGYAFMGAAHSQAWRSA-PRFFDLPLHPDLNVLCGRDAEAVRAAAG-------------------------KL-- 58 (390)
T ss_dssp EEEEEECHHHHHHHHHHHHHHH-HHHSCCSSEEEEEEEECSSHHHHHHHHH-------------------------HH--
T ss_pred CcEEEEcCCHHHHHHHHHHHhC-ccccccccCceEEEEEcCCHHHHHHHHH-------------------------Hc--
Confidence 4799999999999888877654 20 0000244 477888876543210 00
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEee
Q 022050 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (303)
Q Consensus 120 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~--~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~ 197 (303)
.-.++.+|.++.+. +.|+|++++|+....++..+... . +..| -+-
T Consensus 59 --------------------------g~~~~~~d~~~ll~~~~iDaV~I~tP~~~H~~~~~~al~---a---GkhV-l~E 105 (390)
T 4h3v_A 59 --------------------------GWSTTETDWRTLLERDDVQLVDVCTPGDSHAEIAIAALE---A---GKHV-LCE 105 (390)
T ss_dssp --------------------------TCSEEESCHHHHTTCTTCSEEEECSCGGGHHHHHHHHHH---T---TCEE-EEE
T ss_pred --------------------------CCCcccCCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHH---c---CCCc-eee
Confidence 01245678888764 57999999999876665554332 2 3333 356
Q ss_pred ccCccc
Q 022050 198 KGVEAE 203 (303)
Q Consensus 198 nGi~~~ 203 (303)
|.+..+
T Consensus 106 KPla~t 111 (390)
T 4h3v_A 106 KPLANT 111 (390)
T ss_dssp SSSCSS
T ss_pred cCcccc
Confidence 665543
No 279
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=96.89 E-value=0.0025 Score=63.09 Aligned_cols=54 Identities=28% Similarity=0.327 Sum_probs=36.2
Q ss_pred hhhhHHHHHhccCCCCCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 27 ERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
+.+++|+..++..... ++|.|+|+|.+|..+|..|.+. | ++|++++.+++.+++
T Consensus 333 ~~l~~~~~~~~~~~~~-~~viIiG~G~~G~~la~~L~~~-g-----~~v~vid~d~~~~~~ 386 (565)
T 4gx0_A 333 SQLAALEYLIGEAPED-ELIFIIGHGRIGCAAAAFLDRK-P-----VPFILIDRQESPVCN 386 (565)
T ss_dssp --------------CC-CCEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESSCCSSCC
T ss_pred HHHHHHHHHhcCCCCC-CCEEEECCCHHHHHHHHHHHHC-C-----CCEEEEECChHHHhh
Confidence 4566677777765545 8999999999999999999998 8 999999999987653
No 280
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=96.85 E-value=0.0025 Score=59.87 Aligned_cols=94 Identities=15% Similarity=0.221 Sum_probs=60.0
Q ss_pred CceEEEEC-CChHHHH-HH----HHHHHhcCCCCCCeeE----------EEEecCCchhhhhhhhhHHHHHhhhhhHHHH
Q 022050 43 PLRIVGVG-AGAWGSV-FT----AMLQDSYGYLRDKVLI----------RIWRRPGRSVDRATAEHLFEVINSREDVLRR 106 (303)
Q Consensus 43 ~~kI~VIG-aG~mG~a-iA----~~La~~~G~~~~~~~V----------~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~ 106 (303)
++||+||| +|.||.. .+ ..+... +. ..+ .++++++++.+++.+
T Consensus 6 ~irigiiG~~G~~g~~~h~~~~~~~~~~~-~~----~~l~~~~~~~~~~av~~~~~~~a~~~a~---------------- 64 (383)
T 3oqb_A 6 RLGLIMNGVTGRMGLNQHLIRSIVAIRDQ-GG----VRLKNGDRIMPDPILVGRSAEKVEALAK---------------- 64 (383)
T ss_dssp EEEEEEESTTSTHHHHTTTTTTHHHHHHH-TS----EECTTSCEEEEEEEEECSSSHHHHHHHH----------------
T ss_pred eeEEEEEeccchhhhhhhHHHHHHHHhhc-Cc----eeecCCcccceeeEEEcCCHHHHHHHHH----------------
Confidence 48999999 9999998 66 666665 41 222 389999876543210
Q ss_pred hhhhcccchhhhhhhcCCcccchhhhhccccccCCCCCCCCe-EEecCHHHHhcC--CCEEEEecCchhHHHHHHHHHHH
Q 022050 107 LIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPL-KVVTNLQEAVWD--ADIVINGLPSTETKEVFEEISRY 183 (303)
Q Consensus 107 ~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i-~~t~d~~~a~~~--aDlVIiaVp~~~~~~vl~~l~~~ 183 (303)
.. ++ .+++|.++.+.+ .|+|++++|+....++..+.
T Consensus 65 ---------~~-----------------------------~~~~~~~~~~~ll~~~~iD~V~i~tp~~~h~~~~~~a--- 103 (383)
T 3oqb_A 65 ---------RF-----------------------------NIARWTTDLDAALADKNDTMFFDAATTQARPGLLTQA--- 103 (383)
T ss_dssp ---------HT-----------------------------TCCCEESCHHHHHHCSSCCEEEECSCSSSSHHHHHHH---
T ss_pred ---------Hh-----------------------------CCCcccCCHHHHhcCCCCCEEEECCCchHHHHHHHHH---
Confidence 00 12 356788887754 89999999987655554443
Q ss_pred hhccCCCCEEEEeeccCcc
Q 022050 184 WKERITVPVIISLAKGVEA 202 (303)
Q Consensus 184 l~~~~~~~iivs~~nGi~~ 202 (303)
+.. +..|+ +-|.+..
T Consensus 104 l~~---Gk~V~-~EKP~a~ 118 (383)
T 3oqb_A 104 INA---GKHVY-CEKPIAT 118 (383)
T ss_dssp HTT---TCEEE-ECSCSCS
T ss_pred HHC---CCeEE-EcCCCCC
Confidence 233 44444 5565544
No 281
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=96.85 E-value=0.0058 Score=57.17 Aligned_cols=102 Identities=14% Similarity=0.168 Sum_probs=61.8
Q ss_pred CCceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCc--hhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhh
Q 022050 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR--SVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVE 118 (303)
Q Consensus 42 ~~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~--~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~ 118 (303)
.|+||+|+|+ |.+|..+...|..+ . ..++..+..+.. +..+ . +.+ ..+.+.
T Consensus 3 ~M~kv~IvGatG~vG~~l~~~L~~~-p----~~el~~l~s~~~~~saGk----~----~~~-------------~~p~~~ 56 (337)
T 3dr3_A 3 AMLNTLIVGASGYAGAELVTYVNRH-P----HMNITALTVSAQSNDAGK----L----ISD-------------LHPQLK 56 (337)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHC-T----TEEEEEEEEETTCTTTTS----B----HHH-------------HCGGGT
T ss_pred CceEEEEECCCChHHHHHHHHHHhC-C----CCcEEEEEecCchhhcCC----c----hHH-------------hCcccc
Confidence 4689999996 99999999999875 2 167766544431 1110 0 000 011110
Q ss_pred hhhcCCcccchhhhhccccccCCCCCCCCeEEec--CHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEe
Q 022050 119 ARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVT--NLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISL 196 (303)
Q Consensus 119 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~--d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~ 196 (303)
. . ..+.+.. +.++...++|+||+|+|.....+..+++. .. ++.+|.+
T Consensus 57 ----~------------~---------~~~~v~~~~~~~~~~~~~Dvvf~a~p~~~s~~~~~~~~---~~---g~~vIDl 105 (337)
T 3dr3_A 57 ----G------------I---------VELPLQPMSDISEFSPGVDVVFLATAHEVSHDLAPQFL---EA---GCVVFDL 105 (337)
T ss_dssp ----T------------T---------CCCBEEEESSGGGTCTTCSEEEECSCHHHHHHHHHHHH---HT---TCEEEEC
T ss_pred ----C------------c---------cceeEeccCCHHHHhcCCCEEEECCChHHHHHHHHHHH---HC---CCEEEEc
Confidence 0 0 0122222 44443378999999999998777777653 33 6788888
Q ss_pred eccC
Q 022050 197 AKGV 200 (303)
Q Consensus 197 ~nGi 200 (303)
+.-+
T Consensus 106 Sa~f 109 (337)
T 3dr3_A 106 SGAF 109 (337)
T ss_dssp SSTT
T ss_pred CCcc
Confidence 7654
No 282
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=96.85 E-value=0.0022 Score=51.40 Aligned_cols=89 Identities=15% Similarity=0.078 Sum_probs=62.4
Q ss_pred CCceEEEECC----ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhh
Q 022050 42 DPLRIVGVGA----GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYV 117 (303)
Q Consensus 42 ~~~kI~VIGa----G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~ 117 (303)
.+++|+|||+ +.+|..+...|.+. | ++|+.+.+..+.+.
T Consensus 3 ~p~siAVVGaS~~~~~~g~~v~~~L~~~-g-----~~V~pVnP~~~~i~------------------------------- 45 (122)
T 3ff4_A 3 AMKKTLILGATPETNRYAYLAAERLKSH-G-----HEFIPVGRKKGEVL------------------------------- 45 (122)
T ss_dssp CCCCEEEETCCSCTTSHHHHHHHHHHHH-T-----CCEEEESSSCSEET-------------------------------
T ss_pred CCCEEEEEccCCCCCCHHHHHHHHHHHC-C-----CeEEEECCCCCcCC-------------------------------
Confidence 4688999998 67999999999998 8 77777776543221
Q ss_pred hhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEee
Q 022050 118 EARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (303)
Q Consensus 118 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~ 197 (303)
..++..++.+.-+ .|++++++|+....++++++... .. . . +.++
T Consensus 46 -----------------------------G~~~y~sl~dlp~-vDlavi~~p~~~v~~~v~e~~~~-g~---k-~-v~~~ 89 (122)
T 3ff4_A 46 -----------------------------GKTIINERPVIEG-VDTVTLYINPQNQLSEYNYILSL-KP---K-R-VIFN 89 (122)
T ss_dssp -----------------------------TEECBCSCCCCTT-CCEEEECSCHHHHGGGHHHHHHH-CC---S-E-EEEC
T ss_pred -----------------------------CeeccCChHHCCC-CCEEEEEeCHHHHHHHHHHHHhc-CC---C-E-EEEC
Confidence 1122223333224 89999999999999999997763 22 2 3 4578
Q ss_pred ccCccc
Q 022050 198 KGVEAE 203 (303)
Q Consensus 198 nGi~~~ 203 (303)
.|+...
T Consensus 90 ~G~~~~ 95 (122)
T 3ff4_A 90 PGTENE 95 (122)
T ss_dssp TTCCCH
T ss_pred CCCChH
Confidence 887643
No 283
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=96.84 E-value=0.00086 Score=63.25 Aligned_cols=39 Identities=18% Similarity=0.305 Sum_probs=34.6
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (303)
..++|+|+|+|.+|..++..+... | .+|+++++++++++
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~-G-----a~V~~~d~~~~~~~ 203 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGM-G-----AQVTILDVNHKRLQ 203 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-C-----CEEEEEECCHHHHH
Confidence 348999999999999999999988 8 89999999987654
No 284
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=96.83 E-value=0.0043 Score=56.58 Aligned_cols=39 Identities=21% Similarity=0.143 Sum_probs=34.7
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCe-eEEEEecCCchhhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVDR 87 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~-~V~l~~r~~~~~~~ 87 (303)
.+++.|+|+|.+|.+++..|++. | . +|++++|++++.++
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~~-G-----~~~v~v~~R~~~~a~~ 165 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLDQ-Q-----PASITVTNRTFAKAEQ 165 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-C-----CSEEEEEESSHHHHHH
T ss_pred CCEEEEECchHHHHHHHHHHHhc-C-----CCeEEEEECCHHHHHH
Confidence 47999999999999999999998 8 5 89999999876654
No 285
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=96.83 E-value=0.0011 Score=63.44 Aligned_cols=39 Identities=18% Similarity=0.378 Sum_probs=34.0
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
..||+|+|+|.+|...+..+... | .+|+++|++++.++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~-G-----a~V~v~D~~~~~~~~ 210 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSL-G-----AIVRAFDTRPEVKEQ 210 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCGGGHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-C-----CEEEEEcCCHHHHHH
Confidence 47999999999999999998877 8 789999999876543
No 286
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=96.79 E-value=0.0071 Score=54.41 Aligned_cols=39 Identities=23% Similarity=0.206 Sum_probs=34.9
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
.++++|+|+|.||.+++..|++. | .+|++++|+++++++
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~-G-----~~V~v~~R~~~~~~~ 157 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSL-D-----CAVTITNRTVSRAEE 157 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSHHHHHH
T ss_pred CCEEEEECCcHHHHHHHHHHHHc-C-----CEEEEEECCHHHHHH
Confidence 47899999999999999999998 8 899999999876543
No 287
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=96.77 E-value=0.0053 Score=55.84 Aligned_cols=23 Identities=39% Similarity=0.443 Sum_probs=20.2
Q ss_pred CCceEEEECCChHHHHHHHHHHH
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQD 64 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~ 64 (303)
.++||+|||+|.||...+..+..
T Consensus 6 ~~~rvgiIG~G~iG~~~~~~l~~ 28 (294)
T 1lc0_A 6 GKFGVVVVGVGRAGSVRLRDLKD 28 (294)
T ss_dssp CSEEEEEECCSHHHHHHHHHHTS
T ss_pred CcceEEEEEEcHHHHHHHHHHhc
Confidence 46899999999999998888765
No 288
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=96.74 E-value=0.0043 Score=53.14 Aligned_cols=38 Identities=24% Similarity=0.309 Sum_probs=33.0
Q ss_pred Cce-EEEECC-ChHHHHHHHHHH-HhcCCCCCCeeEEEEecCCc-hhh
Q 022050 43 PLR-IVGVGA-GAWGSVFTAMLQ-DSYGYLRDKVLIRIWRRPGR-SVD 86 (303)
Q Consensus 43 ~~k-I~VIGa-G~mG~aiA~~La-~~~G~~~~~~~V~l~~r~~~-~~~ 86 (303)
||| |.|.|+ |.+|.+++..|+ +. | ++|++++|+++ +++
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~~-g-----~~V~~~~r~~~~~~~ 45 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTYT-D-----MHITLYGRQLKTRIP 45 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHHC-C-----CEEEEEESSHHHHSC
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhcC-C-----ceEEEEecCccccch
Confidence 455 999996 999999999999 77 8 89999999987 554
No 289
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=96.73 E-value=0.0029 Score=57.44 Aligned_cols=39 Identities=21% Similarity=0.352 Sum_probs=35.5
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
.+++.|+|+|.+|.+++..|++. | .+|++++|++++.++
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~-G-----~~v~V~nRt~~ka~~ 156 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQ-G-----LQVSVLNRSSRGLDF 156 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCTTHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHH
Confidence 58999999999999999999998 8 899999999987654
No 290
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=96.71 E-value=0.0072 Score=56.22 Aligned_cols=38 Identities=11% Similarity=0.090 Sum_probs=28.5
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeE-EEEecCCchh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLI-RIWRRPGRSV 85 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V-~l~~r~~~~~ 85 (303)
++||+|+|+|.||..++..+... . +.++ .+.+++++..
T Consensus 2 ~irVgIiG~G~iG~~~~r~l~~~-~----~~elvav~d~~~~~~ 40 (334)
T 2czc_A 2 KVKVGVNGYGTIGKRVAYAVTKQ-D----DMELIGITKTKPDFE 40 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTC-T----TEEEEEEEESSCSHH
T ss_pred CcEEEEEeEhHHHHHHHHHHhcC-C----CCEEEEEEcCCHHHH
Confidence 36999999999999999999875 3 1454 4567766544
No 291
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=96.69 E-value=0.0052 Score=58.52 Aligned_cols=102 Identities=24% Similarity=0.265 Sum_probs=65.9
Q ss_pred CCCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecC----Cchhhh-hhhhhHHHHHhhhhhHHHHhhhhcccch
Q 022050 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRP----GRSVDR-ATAEHLFEVINSREDVLRRLIRRCAYLK 115 (303)
Q Consensus 41 ~~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~----~~~~~~-~~~~~l~~~i~~~~~~~~~~~~~~~~l~ 115 (303)
-...||+|+|+|.+|.++|..+... |. .+|+++||+ .++.+. ++. +.+.+. .
T Consensus 190 l~~~kVVv~GAGaAG~~iAkll~~~-G~----~~I~v~Dr~Gli~~~R~~~~L~~--~k~~~A----------------~ 246 (388)
T 1vl6_A 190 IEEVKVVVNGIGAAGYNIVKFLLDL-GV----KNVVAVDRKGILNENDPETCLNE--YHLEIA----------------R 246 (388)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHH-TC----CEEEEEETTEECCTTSGGGCSSH--HHHHHH----------------H
T ss_pred CCCcEEEEECCCHHHHHHHHHHHhC-CC----CeEEEEECCCcccCCCcccccCH--HHHHHH----------------H
Confidence 3458999999999999999999998 82 489999998 443110 110 000000 0
Q ss_pred hhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHHHHHHHHhhccCCCCEEE
Q 022050 116 YVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVFEEISRYWKERITVPVII 194 (303)
Q Consensus 116 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~-~~~~vl~~l~~~l~~~~~~~iiv 194 (303)
+. + ......++.++++++|++|=+..+. ..+++++++ .+ +.+|+
T Consensus 247 ---------~~------------~-------~~~~~~~L~eav~~ADVlIG~Sap~l~t~emVk~M----a~---~pIIf 291 (388)
T 1vl6_A 247 ---------IT------------N-------PERLSGDLETALEGADFFIGVSRGNILKPEWIKKM----SR---KPVIF 291 (388)
T ss_dssp ---------TS------------C-------TTCCCSCHHHHHTTCSEEEECSCSSCSCHHHHTTS----CS---SCEEE
T ss_pred ---------hh------------h-------ccCchhhHHHHHccCCEEEEeCCCCccCHHHHHhc----CC---CCEEE
Confidence 00 0 0111357899999999988877543 456666663 34 56888
Q ss_pred EeeccC
Q 022050 195 SLAKGV 200 (303)
Q Consensus 195 s~~nGi 200 (303)
.++|..
T Consensus 292 alSNPt 297 (388)
T 1vl6_A 292 ALANPV 297 (388)
T ss_dssp ECCSSS
T ss_pred EcCCCC
Confidence 888754
No 292
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=96.69 E-value=0.0064 Score=56.85 Aligned_cols=97 Identities=10% Similarity=0.108 Sum_probs=54.8
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEE-EEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
++||+|+|+|.||..++..+..+ . ..++. +.+++++...+. .... + -+.+...
T Consensus 1 ~ikVgIiGaG~iG~~~~r~L~~~-p----~~elvav~d~~~~~~~~~--------a~~~-------g-~~~~~~~----- 54 (340)
T 1b7g_O 1 MVNVAVNGYGTIGKRVADAIIKQ-P----DMKLVGVAKTSPNYEAFI--------AHRR-------G-IRIYVPQ----- 54 (340)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTC-T----TEEEEEEECSSCSHHHHH--------HHHT-------T-CCEECCG-----
T ss_pred CeEEEEEecCHHHHHHHHHHHcC-C----CCEEEEEEcCChHHHHHH--------HHhc-------C-cceecCc-----
Confidence 36999999999999999999875 3 14543 456654432211 0000 0 0001000
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHH
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEIS 181 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~ 181 (303)
.|++...+ ..+.++.+.++...++|+||+|+|.....+..+...
T Consensus 55 -----~~~~~~~~-----------~~v~v~~~~e~l~~~vDvV~~aTp~~~s~~~a~~~~ 98 (340)
T 1b7g_O 55 -----QSIKKFEE-----------SGIPVAGTVEDLIKTSDIVVDTTPNGVGAQYKPIYL 98 (340)
T ss_dssp -----GGHHHHHT-----------TTCCCCCCHHHHHHHCSEEEECCSTTHHHHHHHHHH
T ss_pred -----CHHHHhcc-----------cccccccCHhHhhcCCCEEEECCCCchhHHHHHHHH
Confidence 00000000 124445667666678999999999997776665543
No 293
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=96.69 E-value=0.0037 Score=57.11 Aligned_cols=38 Identities=18% Similarity=0.109 Sum_probs=34.0
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCe-eEEEEecCCchhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVD 86 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~-~V~l~~r~~~~~~ 86 (303)
.+++.|+|+|.+|.+++..|++. | . +|++++|+.++.+
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~~-G-----~~~v~v~nRt~~ka~ 160 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKDN-F-----AKDIYVVTRNPEKTS 160 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHHT-T-----CSEEEEEESCHHHHH
T ss_pred CCEEEEECCcHHHHHHHHHHHHc-C-----CCEEEEEeCCHHHHH
Confidence 47999999999999999999998 8 5 8999999987654
No 294
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=96.68 E-value=0.0044 Score=57.94 Aligned_cols=36 Identities=8% Similarity=0.084 Sum_probs=27.0
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEE-EEecCCc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGR 83 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~-l~~r~~~ 83 (303)
|+||+|+|+|.||..++..|.++ . +.++. +.++++.
T Consensus 1 mikVgIiGaG~iG~~l~r~L~~~-~----~~elvav~d~~~~ 37 (337)
T 1cf2_P 1 MKAVAINGYGTVGKRVADAIAQQ-D----DMKVIGVSKTRPD 37 (337)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTS-S----SEEEEEEEESSCS
T ss_pred CeEEEEEeECHHHHHHHHHHHcC-C----CcEEEEEEcCChh
Confidence 47999999999999999999875 2 14543 3566544
No 295
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=96.62 E-value=0.016 Score=51.66 Aligned_cols=36 Identities=14% Similarity=0.186 Sum_probs=31.6
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~ 83 (303)
..||.|+|+|.+|+.++..|+.. |. ..++++|++.-
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~-Gv----g~i~lvD~d~v 63 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGA-GV----GTLVLADDDDV 63 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHT-TC----SEEEEECCCBC
T ss_pred cCcEEEEccCHHHHHHHHHHHHc-CC----CeEEEEeCCCc
Confidence 37999999999999999999998 83 48999998763
No 296
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=96.60 E-value=0.017 Score=51.53 Aligned_cols=29 Identities=17% Similarity=0.333 Sum_probs=23.0
Q ss_pred ceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEE
Q 022050 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRI 77 (303)
Q Consensus 44 ~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l 77 (303)
|||+|+|+ |.||..++..+....+ +++..
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~-----~elva 30 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADD-----LTLSA 30 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTT-----CEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-----CEEEE
Confidence 69999997 9999999998875413 66653
No 297
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=96.55 E-value=0.0033 Score=59.56 Aligned_cols=40 Identities=18% Similarity=0.235 Sum_probs=34.2
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
...||+|+|+|.+|...+..+... | ..|+++++++++.+.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~-G-----a~V~~~d~~~~~~~~ 210 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRL-G-----AVVMATDVRAATKEQ 210 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCSTTHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHH
Confidence 457999999999999999988877 8 789999999876543
No 298
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=96.54 E-value=0.027 Score=52.72 Aligned_cols=36 Identities=19% Similarity=0.202 Sum_probs=32.0
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~ 83 (303)
..||.|+|+|..|+.+|..|+.. |. ..++++|++.-
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~a-GV----g~ItlvD~D~V 69 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAW-GV----RKITFVDNGTV 69 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TC----CEEEEECCCBC
T ss_pred CCEEEEECCCHHHHHHHHHHHHc-CC----CEEEEecCCEe
Confidence 47999999999999999999998 83 58999998763
No 299
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=96.53 E-value=0.013 Score=54.12 Aligned_cols=38 Identities=13% Similarity=0.105 Sum_probs=28.5
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCee-EEEEecCCch
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGRS 84 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~-V~l~~r~~~~ 84 (303)
++||+|||+|.+|..++..+.++.. ..+ +.++++++++
T Consensus 4 ~irVaIIG~G~iG~~~~~~l~~~~~----~~elvav~d~~~~~ 42 (312)
T 1nvm_B 4 KLKVAIIGSGNIGTDLMIKVLRNAK----YLEMGAMVGIDAAS 42 (312)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCS----SEEEEEEECSCTTC
T ss_pred CCEEEEEcCcHHHHHHHHHHHhhCc----CeEEEEEEeCChhh
Confidence 4799999999999999999976311 144 4567888765
No 300
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=96.49 E-value=0.0048 Score=56.99 Aligned_cols=97 Identities=14% Similarity=0.081 Sum_probs=59.4
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEE-EEecCC-chhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPG-RSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~-l~~r~~-~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~ 120 (303)
++||+|||+|.+|...+..+ .. + .+|+ ++++++ ++.++..+ ..+..
T Consensus 2 ~~rvgiiG~G~~~~~~~~~l-~~-~-----~~lvav~d~~~~~~~~~~~~----------------------~~~~~--- 49 (337)
T 3ip3_A 2 SLKICVIGSSGHFRYALEGL-DE-E-----CSITGIAPGVPEEDLSKLEK----------------------AISEM--- 49 (337)
T ss_dssp CEEEEEECSSSCHHHHHTTC-CT-T-----EEEEEEECSSTTCCCHHHHH----------------------HHHTT---
T ss_pred ceEEEEEccchhHHHHHHhc-CC-C-----cEEEEEecCCchhhHHHHHH----------------------HHHHc---
Confidence 47999999999988776666 33 4 6655 678887 44432110 00000
Q ss_pred hcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhc--CCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeec
Q 022050 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (303)
Q Consensus 121 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~--~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~n 198 (303)
. ...++.+|.++.+. +.|+|++++|+....++..+.. .. +..|+ +-|
T Consensus 50 ----~--------------------~~~~~~~~~~~ll~~~~vD~V~I~tp~~~H~~~~~~al---~a---GkhVl-~EK 98 (337)
T 3ip3_A 50 ----N--------------------IKPKKYNNWWEMLEKEKPDILVINTVFSLNGKILLEAL---ER---KIHAF-VEK 98 (337)
T ss_dssp ----T--------------------CCCEECSSHHHHHHHHCCSEEEECSSHHHHHHHHHHHH---HT---TCEEE-ECS
T ss_pred ----C--------------------CCCcccCCHHHHhcCCCCCEEEEeCCcchHHHHHHHHH---HC---CCcEE-EeC
Confidence 0 01346678888765 5899999999987666555433 32 44433 556
Q ss_pred cCcc
Q 022050 199 GVEA 202 (303)
Q Consensus 199 Gi~~ 202 (303)
.+..
T Consensus 99 Pla~ 102 (337)
T 3ip3_A 99 PIAT 102 (337)
T ss_dssp SSCS
T ss_pred CCCC
Confidence 5554
No 301
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=96.49 E-value=0.0024 Score=58.95 Aligned_cols=37 Identities=14% Similarity=-0.031 Sum_probs=32.8
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (303)
.++|.|+|+|.+|..++..|.+. | + |++++++++.++
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~-g-----~-v~vid~~~~~~~ 151 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGS-E-----V-FVLAEDENVRKK 151 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGS-C-----E-EEEESCGGGHHH
T ss_pred cCCEEEECCcHHHHHHHHHHHhC-C-----c-EEEEeCChhhhh
Confidence 46899999999999999999888 8 8 999999998664
No 302
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=96.49 E-value=0.011 Score=59.28 Aligned_cols=35 Identities=20% Similarity=0.226 Sum_probs=31.2
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~ 82 (303)
..||.|||+|..|+.+|..|+.. |. ..++++|.+.
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~a-GV----G~ItLvD~D~ 361 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAW-GV----RKITFVDNGT 361 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-TC----CEEEEECCSB
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CC----CEEEEECCCc
Confidence 47999999999999999999998 83 5899998874
No 303
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=96.48 E-value=0.0067 Score=52.69 Aligned_cols=39 Identities=15% Similarity=0.227 Sum_probs=33.4
Q ss_pred CceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhh
Q 022050 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (303)
Q Consensus 43 ~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (303)
+|+|.|.|+ |.+|.+++..|++. | .++|++++|+++.++
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~-G----~~~V~~~~R~~~~~~ 62 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADK-Q----TIKQTLFARQPAKIH 62 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTC-T----TEEEEEEESSGGGSC
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhC-C----CceEEEEEcChhhhc
Confidence 578999995 99999999999988 7 168999999987554
No 304
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=96.44 E-value=0.0074 Score=57.41 Aligned_cols=38 Identities=18% Similarity=0.294 Sum_probs=29.6
Q ss_pred HhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeeccC
Q 022050 157 AVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (303)
Q Consensus 157 a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nGi 200 (303)
.+.++|+||+|+|.....++.+++. +. ++.+|++++-+
T Consensus 90 ~~~~~Dvvf~alp~~~s~~~~~~~~---~~---G~~VIDlSa~f 127 (381)
T 3hsk_A 90 NFLECDVVFSGLDADVAGDIEKSFV---EA---GLAVVSNAKNY 127 (381)
T ss_dssp TGGGCSEEEECCCHHHHHHHHHHHH---HT---TCEEEECCSTT
T ss_pred hcccCCEEEECCChhHHHHHHHHHH---hC---CCEEEEcCCcc
Confidence 3578999999999998887777764 33 67888888665
No 305
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=96.40 E-value=0.0075 Score=58.47 Aligned_cols=38 Identities=21% Similarity=0.242 Sum_probs=33.8
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (303)
+++|+|+|+|.+|.+++..|++. | ++|++++|++++++
T Consensus 3 ~k~VlViGaG~iG~~ia~~L~~~-G-----~~V~v~~R~~~~a~ 40 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTDS-G-----IKVTVACRTLESAK 40 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTT-T-----CEEEEEESSHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-c-----CEEEEEECCHHHHH
Confidence 37899999999999999999988 8 78999999986554
No 306
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=96.39 E-value=0.017 Score=56.14 Aligned_cols=55 Identities=16% Similarity=0.290 Sum_probs=47.2
Q ss_pred hhhhhHHHHHhccCCCCCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 26 EERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
.+.++++++.+++.+...++|.|+|+|.+|..+|..|-++ ++|.++.+++++.+.
T Consensus 218 ~~~i~~~~~~~g~~~~~~~~v~I~GgG~ig~~lA~~L~~~-------~~v~iIE~d~~r~~~ 272 (461)
T 4g65_A 218 SNHIRSVMSELQRLEKPYRRIMIVGGGNIGASLAKRLEQT-------YSVKLIERNLQRAEK 272 (461)
T ss_dssp TTTHHHHHHHTTGGGSCCCEEEEECCSHHHHHHHHHHTTT-------SEEEEEESCHHHHHH
T ss_pred cchHHHHHHhhccccccccEEEEEcchHHHHHHHHHhhhc-------CceEEEecCHHHHHH
Confidence 4567788888898888889999999999999999998543 799999999987754
No 307
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=96.39 E-value=0.0079 Score=56.01 Aligned_cols=38 Identities=16% Similarity=0.137 Sum_probs=28.8
Q ss_pred CceEEEECCChHHHHHHHHHHHh--------cCCCCCCeeE-EEEecCCchh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDS--------YGYLRDKVLI-RIWRRPGRSV 85 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~--------~G~~~~~~~V-~l~~r~~~~~ 85 (303)
|+||+|||+|.||+.++..+.++ .+ .+| -+++++++..
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~-----~~lvaV~d~~~~~~ 48 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGE-----FKVTAVADSKSSIS 48 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCC-----EEEEEEECSSCEEE
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCC-----EEEEEEEeCChHhc
Confidence 68999999999999999998764 12 454 4567776554
No 308
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=96.38 E-value=0.028 Score=52.61 Aligned_cols=52 Identities=19% Similarity=0.206 Sum_probs=39.8
Q ss_pred hhhhhHHHHHhccCCCC---CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 022050 26 EERLDELRRLMGKAEGD---PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (303)
Q Consensus 26 ~~~~~~~~~~~~~~~~~---~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~ 82 (303)
++|.+.-.++++..... ..||+|+|+|..|+.+|..|+.. |. ..++++|.+.
T Consensus 16 ~~rY~Rq~~l~G~~~q~~L~~~~VlivG~GGlG~~ia~~La~~-Gv----g~itlvD~d~ 70 (346)
T 1y8q_A 16 AAQYDRQIRLWGLEAQKRLRASRVLLVGLKGLGAEIAKNLILA-GV----KGLTMLDHEQ 70 (346)
T ss_dssp HHHHHHHHHHHCHHHHHHHHTCEEEEECCSHHHHHHHHHHHHH-TC----SEEEEECCCB
T ss_pred HHHHHHHHHhhCHHHHHHHhCCeEEEECCCHHHHHHHHHHHHc-CC----CEEEEEECCC
Confidence 34555555666654422 37899999999999999999999 93 4899998875
No 309
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=96.38 E-value=0.007 Score=57.24 Aligned_cols=60 Identities=13% Similarity=0.148 Sum_probs=43.2
Q ss_pred cCCchhhhhhHH-HHHhccCCCCCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhh
Q 022050 21 TNGSLEERLDEL-RRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (303)
Q Consensus 21 ~~~~~~~~~~~~-~~~~~~~~~~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (303)
|.++.-.-.+++ +..++..+-.-++|+|+|+|+||..+|..|.+. | ..|+++|++++.++
T Consensus 150 Tg~GV~~~~~~~~~~~~G~~~L~GktV~V~G~G~VG~~~A~~L~~~-G-----akVvv~D~~~~~l~ 210 (364)
T 1leh_A 150 TAYGVYRGMKAAAKEAFGSDSLEGLAVSVQGLGNVAKALCKKLNTE-G-----AKLVVTDVNKAAVS 210 (364)
T ss_dssp HHHHHHHHHHHHHHHHHSSCCCTTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHHH
T ss_pred hhhHHHHHHHHHHHhhccccCCCcCEEEEECchHHHHHHHHHHHHC-C-----CEEEEEcCCHHHHH
Confidence 444443344444 333454333448999999999999999999998 9 88999999876544
No 310
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=96.36 E-value=0.0041 Score=57.10 Aligned_cols=56 Identities=25% Similarity=0.284 Sum_probs=43.2
Q ss_pred eccCCch--hhhhhHHHHHhccCCCCCceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 022050 19 HHTNGSL--EERLDELRRLMGKAEGDPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (303)
Q Consensus 19 ~~~~~~~--~~~~~~~~~~~~~~~~~~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~ 83 (303)
||..||. +.+.+.+.+.+++. +|+|.|.|+ |.+|..++..|++. | ++|++++|++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~---~~~vlVtGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~ 62 (352)
T 1sb8_A 4 HHHHGSMGMMSRYEELRKELPAQ---PKVWLITGVAGFIGSNLLETLLKL-D-----QKVVGLDNFAT 62 (352)
T ss_dssp --------CCCHHHHHHHHHHHS---CCEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEECCSS
T ss_pred cccccchHHHHHHHhhchhcCcc---CCeEEEECCCcHHHHHHHHHHHHC-C-----CEEEEEeCCCc
Confidence 5666776 78888888887764 489999999 99999999999998 8 89999999764
No 311
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=96.35 E-value=0.013 Score=54.96 Aligned_cols=33 Identities=18% Similarity=0.339 Sum_probs=26.2
Q ss_pred ceEEEEC-CChHHHHHHHHHHHhcCCCCCCeeEEEEecC
Q 022050 44 LRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRIWRRP 81 (303)
Q Consensus 44 ~kI~VIG-aG~mG~aiA~~La~~~G~~~~~~~V~l~~r~ 81 (303)
+||+|+| .|.+|..++..|..+ . ..+|+.+.++
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~-p----~~ev~~i~~s 42 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADH-P----MFELTALAAS 42 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTC-S----SEEEEEEEEC
T ss_pred ceEEEECcCCHHHHHHHHHHhcC-C----CCEEEEEEcc
Confidence 6999999 699999999998875 3 2577766543
No 312
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=96.35 E-value=0.029 Score=52.59 Aligned_cols=37 Identities=22% Similarity=0.281 Sum_probs=32.3
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCch
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (303)
..||.|+|+|..|+.+|..|+.. |. ..++++|++.-.
T Consensus 118 ~~~VlvvG~GglGs~va~~La~a-Gv----g~i~lvD~D~Ve 154 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATS-GI----GEIILIDNDQIE 154 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH-TC----SEEEEEECCBCC
T ss_pred CCeEEEECCCHHHHHHHHHHHhC-CC----CeEEEECCCcCc
Confidence 47899999999999999999999 93 589999998633
No 313
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=96.34 E-value=0.0032 Score=58.30 Aligned_cols=35 Identities=23% Similarity=0.456 Sum_probs=32.3
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~ 83 (303)
.|||+|||+|.-|.++|..|++. | ++|++++++++
T Consensus 1 sm~V~IVGaGpaGl~~A~~L~~~-G-----~~v~v~Er~~~ 35 (412)
T 4hb9_A 1 SMHVGIIGAGIGGTCLAHGLRKH-G-----IKVTIYERNSA 35 (412)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCS
T ss_pred CCEEEEECcCHHHHHHHHHHHhC-C-----CCEEEEecCCC
Confidence 38999999999999999999999 9 99999998764
No 314
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=96.33 E-value=0.014 Score=54.14 Aligned_cols=34 Identities=24% Similarity=0.281 Sum_probs=31.1
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCe-eEEEEecCC
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPG 82 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~-~V~l~~r~~ 82 (303)
-+++.|+|+|-+|.+++..|++. | . +|++++|++
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~-G-----a~~V~i~nR~~ 188 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALD-G-----VKEISIFNRKD 188 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHT-T-----CSEEEEEECSS
T ss_pred CCEEEEECCChHHHHHHHHHHHC-C-----CCEEEEEECCC
Confidence 47899999999999999999998 8 5 899999993
No 315
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=96.26 E-value=0.0088 Score=56.13 Aligned_cols=39 Identities=21% Similarity=0.307 Sum_probs=34.6
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
..+|+|+|+|.+|.+.+..+... | .+|++++|++++++.
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~-G-----a~V~v~dr~~~r~~~ 205 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGL-G-----AQVQIFDINVERLSY 205 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-----CEEEEEeCCHHHHHH
Confidence 47999999999999999999888 8 789999999876654
No 316
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=96.26 E-value=0.016 Score=52.45 Aligned_cols=40 Identities=18% Similarity=0.015 Sum_probs=34.7
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
.+++.|+|+|.+|.+++..|++. |. .+|++++|++++.++
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~~-G~----~~v~i~~R~~~~a~~ 159 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQA-GP----SELVIANRDMAKALA 159 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHT-CC----SEEEEECSCHHHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHHc-CC----CEEEEEeCCHHHHHH
Confidence 47999999999999999999998 81 389999999876654
No 317
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=96.04 E-value=0.057 Score=49.45 Aligned_cols=61 Identities=26% Similarity=0.361 Sum_probs=31.8
Q ss_pred cceeccCCchhhhhhHHHHHhcc-CCC---CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 022050 16 GLIHHTNGSLEERLDELRRLMGK-AEG---DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (303)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~ 82 (303)
---||+.|---.|.--|+. ++. ... ...||.|||+|.+|+.++..|+.. |. ..++++|.+.
T Consensus 6 ~~~~~~~~~~y~r~i~L~~-~G~~~~q~kL~~~~VlVvGaGGlGs~va~~La~a-GV----G~i~lvD~D~ 70 (292)
T 3h8v_A 6 HHHHHSSGLVPRGSMALKR-MGIVSDYEKIRTFAVAIVGVGGVGSVTAEMLTRC-GI----GKLLLFDYDK 70 (292)
T ss_dssp ---------------------------CGGGGCEEEEECCSHHHHHHHHHHHHH-TC----SEEEEECCCB
T ss_pred ccccccCCCCchHhhcccc-cChHHHHHHHhCCeEEEECcCHHHHHHHHHHHHc-CC----CEEEEECCCc
Confidence 3345565555555544443 343 221 247999999999999999999999 83 5899999886
No 318
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=96.02 E-value=0.0076 Score=53.44 Aligned_cols=38 Identities=18% Similarity=0.161 Sum_probs=34.5
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (303)
+|||.|.|+|.+|+.++..|.+. | ++|+.++|+++..+
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~-g-----~~V~~~~r~~~~~~ 42 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQ-G-----WRIIGTSRNPDQME 42 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGG-T-----CEEEEEESCGGGHH
T ss_pred cCcEEEECCcHHHHHHHHHHHHC-C-----CEEEEEEcChhhhh
Confidence 58999999999999999999999 8 89999999987553
No 319
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=96.00 E-value=0.05 Score=52.50 Aligned_cols=35 Identities=23% Similarity=0.325 Sum_probs=31.1
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~ 83 (303)
.||.|||+|.+|+.++..|+.. |. .+++++|.+.=
T Consensus 41 ~~VlvvG~GGlGs~va~~La~a-Gv----g~i~ivD~D~V 75 (434)
T 1tt5_B 41 CKVLVIGAGGLGCELLKNLALS-GF----RQIHVIDMDTI 75 (434)
T ss_dssp CCEEEECSSTHHHHHHHHHHHT-TC----CCEEEEECCBC
T ss_pred CEEEEECcCHHHHHHHHHHHHc-CC----CEEEEEcCCEe
Confidence 6899999999999999999999 83 57999998763
No 320
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=95.98 E-value=0.017 Score=56.65 Aligned_cols=53 Identities=19% Similarity=0.080 Sum_probs=40.8
Q ss_pred hhhhhHHHHHhccCCCCCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchh
Q 022050 26 EERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSV 85 (303)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~ 85 (303)
+.-++.+++..++.- .-++++|+|+|.+|.++|..|+.. | .+|+++++++...
T Consensus 249 ~sl~dgi~r~tg~~L-~GKtVvVtGaGgIG~aiA~~Laa~-G-----A~Viv~D~~~~~a 301 (488)
T 3ond_A 249 HSLPDGLMRATDVMI-AGKVAVVAGYGDVGKGCAAALKQA-G-----ARVIVTEIDPICA 301 (488)
T ss_dssp HHHHHHHHHHHCCCC-TTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHH
T ss_pred HHHHHHHHHHcCCcc-cCCEEEEECCCHHHHHHHHHHHHC-C-----CEEEEEcCCHHHH
Confidence 444555666555422 237899999999999999999998 9 8999999987643
No 321
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=95.96 E-value=0.035 Score=51.29 Aligned_cols=35 Identities=23% Similarity=0.330 Sum_probs=31.5
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCe-eEEEEecCCc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGR 83 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~-~V~l~~r~~~ 83 (303)
.+++.|+|+|-+|.+++..|++. | . +|++++|+++
T Consensus 148 gk~~lVlGAGGaaraia~~L~~~-G-----~~~v~v~nRt~~ 183 (312)
T 3t4e_A 148 GKTMVLLGAGGAATAIGAQAAIE-G-----IKEIKLFNRKDD 183 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-T-----CSEEEEEECSST
T ss_pred CCEEEEECcCHHHHHHHHHHHHc-C-----CCEEEEEECCCc
Confidence 47899999999999999999998 8 5 8999999943
No 322
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=95.95 E-value=0.038 Score=55.48 Aligned_cols=36 Identities=19% Similarity=0.202 Sum_probs=32.0
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~ 83 (303)
..||.|||+|.+|+.+|..|+.. |. ..++++|.+.-
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~a-GV----G~ItLvD~D~V 361 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAW-GV----RKITFVDNGTV 361 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TC----CEEEEECCCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CC----CEEEEEcCCCC
Confidence 47999999999999999999998 83 58999999863
No 323
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=95.95 E-value=0.0086 Score=50.68 Aligned_cols=37 Identities=22% Similarity=0.268 Sum_probs=33.6
Q ss_pred ceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhh
Q 022050 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (303)
Q Consensus 44 ~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (303)
|||.|.|+ |.+|..++..|++. | ++|++++|+++..+
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~-g-----~~V~~~~R~~~~~~ 38 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNR-G-----HEVTAIVRNAGKIT 38 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESCSHHHH
T ss_pred CeEEEEcCCchhHHHHHHHHHhC-C-----CEEEEEEcCchhhh
Confidence 79999996 99999999999999 8 89999999987553
No 324
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.93 E-value=0.0065 Score=50.81 Aligned_cols=33 Identities=18% Similarity=0.313 Sum_probs=30.4
Q ss_pred eEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 022050 45 RIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (303)
Q Consensus 45 kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~ 83 (303)
.|+|||||.-|.+.|..|+++ | ++|+++++.+.
T Consensus 4 dV~IIGaGpaGL~aA~~La~~-G-----~~V~v~Ek~~~ 36 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAA-G-----HQVHLFDKSRG 36 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHC-C-----CCEEEEECCCC
Confidence 499999999999999999999 9 89999998753
No 325
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=95.90 E-value=0.029 Score=52.42 Aligned_cols=37 Identities=27% Similarity=0.410 Sum_probs=27.5
Q ss_pred hcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeeccC
Q 022050 158 VWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (303)
Q Consensus 158 ~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nGi 200 (303)
+.++|+||+|+|.....+..+.+. .. +..+|+++.-+
T Consensus 66 ~~~vDvV~~a~g~~~s~~~a~~~~---~a---G~~VId~Sa~~ 102 (345)
T 2ozp_A 66 LEPADILVLALPHGVFAREFDRYS---AL---APVLVDLSADF 102 (345)
T ss_dssp CCCCSEEEECCCTTHHHHTHHHHH---TT---CSEEEECSSTT
T ss_pred hcCCCEEEEcCCcHHHHHHHHHHH---HC---CCEEEEcCccc
Confidence 578999999999998777666543 33 67788777544
No 326
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=95.88 E-value=0.0083 Score=55.78 Aligned_cols=37 Identities=11% Similarity=0.116 Sum_probs=32.1
Q ss_pred CCceEEEECCChH-HHHHHHHHHHhcCCCCCCeeEEEEecCCch
Q 022050 42 DPLRIVGVGAGAW-GSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (303)
Q Consensus 42 ~~~kI~VIGaG~m-G~aiA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (303)
..++++|||+|.| |..+|..|+.. | ..|++++|+..+
T Consensus 176 ~gk~vvVIG~G~iVG~~~A~~L~~~-g-----AtVtv~nR~~~~ 213 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRPLAALLAND-G-----ATVYSVDVNNIQ 213 (320)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTT-S-----CEEEEECSSEEE
T ss_pred CCCEEEEECCCcchHHHHHHHHHHC-C-----CEEEEEeCchHH
Confidence 4589999999976 99999999988 7 789999998654
No 327
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=95.76 E-value=0.018 Score=53.01 Aligned_cols=39 Identities=23% Similarity=0.430 Sum_probs=30.9
Q ss_pred CceEEEECC-ChHHHHHHHHHHHhcCCCC--CCeeEEEEecCC
Q 022050 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLR--DKVLIRIWRRPG 82 (303)
Q Consensus 43 ~~kI~VIGa-G~mG~aiA~~La~~~G~~~--~~~~V~l~~r~~ 82 (303)
+|||+|+|+ |.+|+.++..|+.. |++. ...+|+++|+.+
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~-g~~~~~~~~ev~l~D~~~ 45 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAG-EMLGKDQPVILQLLEIPQ 45 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTT-TTTCTTCCEEEEEECCGG
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC-CCCCCCCCCEEEEEeCCC
Confidence 489999997 99999999999988 7320 012899999875
No 328
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=95.68 E-value=0.013 Score=53.05 Aligned_cols=39 Identities=18% Similarity=0.351 Sum_probs=34.1
Q ss_pred CCceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhh
Q 022050 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (303)
Q Consensus 42 ~~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (303)
.+|||.|.|+ |.+|+.++..|++. | ++|++++|+++..+
T Consensus 12 ~~M~ilVtGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~~~~ 51 (342)
T 2x4g_A 12 AHVKYAVLGATGLLGHHAARAIRAA-G-----HDLVLIHRPSSQIQ 51 (342)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHT-T-----CEEEEEECTTSCGG
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHC-C-----CEEEEEecChHhhh
Confidence 3479999997 99999999999998 8 89999999876543
No 329
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=95.67 E-value=0.011 Score=50.39 Aligned_cols=37 Identities=24% Similarity=0.278 Sum_probs=33.7
Q ss_pred ceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhh
Q 022050 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (303)
Q Consensus 44 ~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (303)
|||.|.|+ |.+|..++..|++. | ++|++++|+++..+
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~-g-----~~V~~~~R~~~~~~ 38 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRR-G-----HEVLAVVRDPQKAA 38 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHH
T ss_pred CEEEEEcCCCHHHHHHHHHHHHC-C-----CEEEEEEecccccc
Confidence 78999998 99999999999999 8 89999999986543
No 330
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=95.63 E-value=0.0067 Score=56.55 Aligned_cols=60 Identities=20% Similarity=0.104 Sum_probs=41.5
Q ss_pred ceeccCCchhhhhhHHHHHhccCCCCCceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCch
Q 022050 17 LIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (303)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (303)
-.+|+++.-... +++++.-.+.. .+|+|.|.|+ |.+|..++..|++. | ++|++++|++..
T Consensus 5 ~~~~~~~~~~~~-~~~~~~~~~~~-~~~~vlVtGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~~ 65 (379)
T 2c5a_A 5 TTNGTDYGAYTY-KELEREQYWPS-ENLKISITGAGGFIASHIARRLKHE-G-----HYVIASDWKKNE 65 (379)
T ss_dssp ----------CC-TTCCCCCSCTT-SCCEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESSCCS
T ss_pred ccCCcchhhhhH-HHHhccccccc-cCCeEEEECCccHHHHHHHHHHHHC-C-----CeEEEEECCCcc
Confidence 345666655544 66766655554 5689999999 99999999999998 8 899999998754
No 331
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=95.62 E-value=0.054 Score=50.65 Aligned_cols=36 Identities=11% Similarity=0.195 Sum_probs=26.5
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEE-EEecCCc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGR 83 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~-l~~r~~~ 83 (303)
|+||+|+|+|.+|..++..+..+ . +.+|+ +.+++++
T Consensus 2 mikVgI~G~G~IGr~v~r~l~~~-~----~~evvaV~d~~~~ 38 (343)
T 2yyy_A 2 PAKVLINGYGSIGKRVADAVSMQ-D----DMEVIGVTKTKPD 38 (343)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHS-S----SEEEEEEEESSCS
T ss_pred ceEEEEECCCHHHHHHHHHHHhC-C----CceEEEEecCCHH
Confidence 36999999999999999998875 3 15544 4455443
No 332
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=95.59 E-value=0.02 Score=53.89 Aligned_cols=33 Identities=18% Similarity=0.302 Sum_probs=25.9
Q ss_pred ceEEEEC-CChHHHHHHHHHHHhcCCCCCCeeEEEEecC
Q 022050 44 LRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRIWRRP 81 (303)
Q Consensus 44 ~kI~VIG-aG~mG~aiA~~La~~~G~~~~~~~V~l~~r~ 81 (303)
+||+|+| .|.+|..+...|.++ . ..+++.+...
T Consensus 17 ~kV~IiGAtG~iG~~llr~L~~~-p----~~elvai~~~ 50 (359)
T 1xyg_A 17 IRIGLLGASGYTGAEIVRLLANH-P----HFQVTLMTAD 50 (359)
T ss_dssp EEEEEECCSSHHHHHHHHHHHTC-S----SEEEEEEBCS
T ss_pred cEEEEECcCCHHHHHHHHHHHcC-C----CcEEEEEeCc
Confidence 7999999 699999999999876 4 1466665543
No 333
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=95.58 E-value=0.026 Score=52.98 Aligned_cols=38 Identities=16% Similarity=0.229 Sum_probs=27.4
Q ss_pred HhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeeccCc
Q 022050 157 AVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (303)
Q Consensus 157 a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nGi~ 201 (303)
++.++|+||+|+|.....++.+.+ .. +..+|.+++-+-
T Consensus 77 ~~~~~DvVf~alg~~~s~~~~~~~----~~---G~~vIDlSa~~R 114 (352)
T 2nqt_A 77 VLGGHDAVFLALPHGHSAVLAQQL----SP---ETLIIDCGADFR 114 (352)
T ss_dssp HHTTCSEEEECCTTSCCHHHHHHS----CT---TSEEEECSSTTT
T ss_pred HhcCCCEEEECCCCcchHHHHHHH----hC---CCEEEEECCCcc
Confidence 466899999999998766666554 22 677887775543
No 334
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=95.57 E-value=0.033 Score=54.42 Aligned_cols=40 Identities=18% Similarity=0.253 Sum_probs=31.4
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCch
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (303)
.+||.|||+|.||++++..++++ .-+.. .+|++.|++...
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~-~dv~~-~~I~vaD~~~~~ 52 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEK-FDIKP-SQVTIIAAEGTK 52 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHH-BCCCG-GGEEEEESSCCS
T ss_pred CCCEEEECcCHHHHHHHHHHHhC-CCCce-eEEEEeccchhh
Confidence 48999999999999999999998 42211 268888877654
No 335
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=95.51 E-value=0.017 Score=51.57 Aligned_cols=34 Identities=21% Similarity=0.142 Sum_probs=31.7
Q ss_pred CceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 022050 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (303)
Q Consensus 43 ~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~ 82 (303)
+|||.|.|+ |.+|..++..|++. | ++|++.+|++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~-g-----~~V~~~~R~~ 36 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKA-G-----NPTYALVRKT 36 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHH-T-----CCEEEEECCS
T ss_pred CcEEEEECCCchHHHHHHHHHHhC-C-----CcEEEEECCC
Confidence 578999998 99999999999999 8 8999999987
No 336
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=95.46 E-value=0.045 Score=51.67 Aligned_cols=38 Identities=16% Similarity=0.038 Sum_probs=28.7
Q ss_pred HhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeeccC
Q 022050 157 AVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (303)
Q Consensus 157 a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nGi 200 (303)
.+.++|+||+|+|.....+..+++. .. ++.+|+++.-+
T Consensus 61 ~~~~~Dvvf~a~~~~~s~~~a~~~~---~~---G~~vIDlSa~~ 98 (366)
T 3pwk_A 61 AFEGVDIALFSAGSSTSAKYAPYAV---KA---GVVVVDNTSYF 98 (366)
T ss_dssp TTTTCSEEEECSCHHHHHHHHHHHH---HT---TCEEEECSSTT
T ss_pred HhcCCCEEEECCChHhHHHHHHHHH---HC---CCEEEEcCCcc
Confidence 3578999999999887777776653 33 67888887654
No 337
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=95.45 E-value=0.011 Score=56.59 Aligned_cols=34 Identities=21% Similarity=0.228 Sum_probs=31.6
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~ 83 (303)
.+|+|||+|..|.+.|..|++. | .+|+++++.+.
T Consensus 28 ~dViIIGgG~AGl~aA~~La~~-G-----~~V~llEk~~~ 61 (417)
T 3v76_A 28 QDVVIIGAGAAGMMCAIEAGKR-G-----RRVLVIDHARA 61 (417)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHC-C-----CcEEEEeCCCC
Confidence 6899999999999999999999 8 89999999874
No 338
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=95.43 E-value=0.023 Score=50.37 Aligned_cols=38 Identities=24% Similarity=0.142 Sum_probs=32.3
Q ss_pred ceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhh
Q 022050 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (303)
Q Consensus 44 ~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (303)
|||.|.|+ |.+|+.++..|++..| ++|++.+|++++.+
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g-----~~V~~~~R~~~~~~ 39 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHI-----DHFHIGVRNVEKVP 39 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTC-----TTEEEEESSGGGSC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCC-----CcEEEEECCHHHHH
Confidence 78999997 9999999999887414 79999999987554
No 339
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=95.38 E-value=0.027 Score=50.60 Aligned_cols=45 Identities=16% Similarity=0.046 Sum_probs=29.6
Q ss_pred EEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeecc
Q 022050 149 KVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (303)
Q Consensus 149 ~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nG 199 (303)
.+++|+++.+.++|+|+.|-.+..+++... +.|.. +.-+++.+-|
T Consensus 49 ~a~~d~d~lla~pD~VVe~A~~~av~e~~~---~iL~a---G~dvv~~S~g 93 (253)
T 1j5p_A 49 VVRLDEFQVPSDVSTVVECASPEAVKEYSL---QILKN---PVNYIIISTS 93 (253)
T ss_dssp SEECSSCCCCTTCCEEEECSCHHHHHHHHH---HHTTS---SSEEEECCGG
T ss_pred eeeCCHHHHhhCCCEEEECCCHHHHHHHHH---HHHHC---CCCEEEcChh
Confidence 355667666678899999987776655443 34554 5666666655
No 340
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=95.37 E-value=0.069 Score=51.71 Aligned_cols=22 Identities=23% Similarity=0.392 Sum_probs=19.1
Q ss_pred CceEEEECCChHHHHHHHHHHH
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQD 64 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~ 64 (303)
++||+|+|+|.||..++..+.+
T Consensus 10 ~irIgIIG~G~VG~~~~~~L~~ 31 (444)
T 3mtj_A 10 PIHVGLLGLGTVGGGTLTVLRR 31 (444)
T ss_dssp CEEEEEECCHHHHHHHHHHHHH
T ss_pred cccEEEECCCHHHHHHHHHHHH
Confidence 3689999999999999987764
No 341
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=95.37 E-value=0.017 Score=54.13 Aligned_cols=36 Identities=19% Similarity=0.335 Sum_probs=32.5
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~ 83 (303)
..++|+|||+|..|.+.|..|++. | ++|+++++.+.
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~-G-----~~V~v~E~~~~ 57 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQS-G-----IDCDVYEAVKE 57 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-C-----CCEEEEeCCCC
Confidence 347999999999999999999999 9 89999999874
No 342
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=95.35 E-value=0.018 Score=51.57 Aligned_cols=34 Identities=24% Similarity=0.404 Sum_probs=32.1
Q ss_pred ceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 022050 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (303)
Q Consensus 44 ~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~ 83 (303)
|||.|.|+ |.+|+.++..|.+. | |+|+...|++.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~-G-----~~V~~l~R~~~ 35 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNAR-G-----HEVTLVSRKPG 35 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHC-C-----CEEEEEECCCC
Confidence 89999998 99999999999999 9 99999999875
No 343
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=95.33 E-value=0.015 Score=51.57 Aligned_cols=36 Identities=22% Similarity=0.288 Sum_probs=33.1
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCch
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (303)
+|||.|.|+|.+|+.++..|.+. | ++|++++|+++.
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~-g-----~~V~~~~r~~~~ 38 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQ-G-----HEVTGLRRSAQP 38 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-T-----CCEEEEECTTSC
T ss_pred CCcEEEECCCHHHHHHHHHHHHC-C-----CEEEEEeCCccc
Confidence 47999999999999999999999 8 899999998764
No 344
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=95.32 E-value=0.023 Score=49.01 Aligned_cols=38 Identities=21% Similarity=0.206 Sum_probs=34.6
Q ss_pred CceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhh
Q 022050 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (303)
Q Consensus 43 ~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (303)
.|||.|.|+ |.+|..++..|++. | ++|++++|+++..+
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~-G-----~~V~~~~R~~~~~~ 59 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNK-G-----HEPVAMVRNEEQGP 59 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESSGGGHH
T ss_pred CCeEEEECCCChHHHHHHHHHHhC-C-----CeEEEEECChHHHH
Confidence 489999998 99999999999999 8 89999999987654
No 345
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=95.30 E-value=0.027 Score=48.48 Aligned_cols=37 Identities=22% Similarity=0.348 Sum_probs=33.2
Q ss_pred ceEEEECC-ChHHHHHHHHHHHhcCCCCCCe--eEEEEecCCchhh
Q 022050 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKV--LIRIWRRPGRSVD 86 (303)
Q Consensus 44 ~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~--~V~l~~r~~~~~~ 86 (303)
|+|.|.|+ |.+|.+++..|++. | + +|++++|+++..+
T Consensus 19 ~~vlVtGasg~iG~~l~~~L~~~-G-----~~~~V~~~~r~~~~~~ 58 (242)
T 2bka_A 19 KSVFILGASGETGRVLLKEILEQ-G-----LFSKVTLIGRRKLTFD 58 (242)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHH-T-----CCSEEEEEESSCCCCC
T ss_pred CeEEEECCCcHHHHHHHHHHHcC-C-----CCCEEEEEEcCCCCcc
Confidence 78999996 99999999999999 8 7 9999999986543
No 346
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=95.28 E-value=0.061 Score=49.88 Aligned_cols=41 Identities=12% Similarity=0.102 Sum_probs=29.0
Q ss_pred CceEEEECCChHHHHHHHHHHHhc-----CCCCCCeeE-EEEecCCchhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSY-----GYLRDKVLI-RIWRRPGRSVD 86 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~-----G~~~~~~~V-~l~~r~~~~~~ 86 (303)
++||+|||+|.||..++..+.+.. | .+.+| -++++++++.+
T Consensus 6 ~irvgIiG~G~VG~~~~~~l~~~~~~~~~g---~~~~vvaV~d~~~~~~~ 52 (331)
T 3c8m_A 6 TINLSIFGLGNVGLNLLRIIRSFNEENRLG---LKFNVVFVADSLHSYYN 52 (331)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHCSSS---EEEEEEEEECSSCEEEC
T ss_pred EEeEEEEecCHHHHHHHHHHHhChHHHhcC---CcEEEEEEEECChHHhh
Confidence 479999999999999999987751 1 00343 46677776543
No 347
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=95.28 E-value=0.02 Score=47.28 Aligned_cols=35 Identities=17% Similarity=0.248 Sum_probs=31.7
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~ 83 (303)
+++|+|||+|..|..+|..|++. | .+|+++++.+.
T Consensus 1 ~~~vvIIGgG~~Gl~~A~~l~~~-g-----~~v~lie~~~~ 35 (180)
T 2ywl_A 1 MWDVIVVGGGPSGLSAALFLARA-G-----LKVLVLDGGRS 35 (180)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEECSCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-C-----CcEEEEeCCCC
Confidence 36899999999999999999998 8 89999998764
No 348
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=95.25 E-value=0.021 Score=54.52 Aligned_cols=100 Identities=23% Similarity=0.234 Sum_probs=65.3
Q ss_pred CCCCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCC-------chhhhhhhhhHHHHHhhhhhHHHHhhhhcc
Q 022050 40 EGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG-------RSVDRATAEHLFEVINSREDVLRRLIRRCA 112 (303)
Q Consensus 40 ~~~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~-------~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~ 112 (303)
+-...||+|+|+|+-|.++|..+... |. .+|+++|++. +.+...+. .
T Consensus 185 ~l~d~kVVi~GAGaAG~~iA~ll~~~-Ga----~~I~v~D~~Gli~~~R~~~L~~~k~---------------------~ 238 (398)
T 2a9f_A 185 SLDEVSIVVNGGGSAGLSITRKLLAA-GA----TKVTVVDKFGIINEQEAAQLAPHHL---------------------D 238 (398)
T ss_dssp CTTSCEEEEECCSHHHHHHHHHHHHH-TC----CEEEEEETTEECCTTCCCSCCC------------------------C
T ss_pred CCCccEEEEECCCHHHHHHHHHHHHc-CC----CeEEEEECCCcccCCccccchHHHH---------------------H
Confidence 34468999999999999999999988 82 3999999974 11211100 0
Q ss_pred cchhhhhhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCch-hHHHHHHHHHHHhhccCCCC
Q 022050 113 YLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVFEEISRYWKERITVP 191 (303)
Q Consensus 113 ~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~-~~~~vl~~l~~~l~~~~~~~ 191 (303)
+.... + ......+++++++++|++|=+..+. ..+++++.++ + +.
T Consensus 239 fa~~~---------------------~-------~~~~~~~L~eav~~ADV~IG~Sapgl~T~EmVk~Ma----~---~p 283 (398)
T 2a9f_A 239 IAKVT---------------------N-------REFKSGTLEDALEGADIFIGVSAPGVLKAEWISKMA----A---RP 283 (398)
T ss_dssp HHHHH---------------------S-------CTTCCCSCSHHHHTTCSEEECCSTTCCCHHHHHTSC----S---SC
T ss_pred Hhhcc---------------------C-------cccchhhHHHHhccCCEEEecCCCCCCCHHHHHhhC----C---CC
Confidence 00000 0 0001245788999999977665443 4677777644 4 68
Q ss_pred EEEEeeccC
Q 022050 192 VIISLAKGV 200 (303)
Q Consensus 192 iivs~~nGi 200 (303)
+|+.++|..
T Consensus 284 IIfalsNPt 292 (398)
T 2a9f_A 284 VIFAMANPI 292 (398)
T ss_dssp EEEECCSSS
T ss_pred EEEECCCCC
Confidence 999999875
No 349
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=95.21 E-value=0.021 Score=56.82 Aligned_cols=48 Identities=17% Similarity=0.298 Sum_probs=37.9
Q ss_pred hhhhhhHHHHHhccCCCCCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 022050 25 LEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (303)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~ 82 (303)
...|-+.+.++.. ....|+|||+|..|.++|..|++. | .+|.++++..
T Consensus 18 ~~~r~~~~~~m~~----~~~DVvVIGgGi~G~~~A~~La~r-G-----~~V~LlE~~~ 65 (571)
T 2rgh_A 18 NKTRQDSIQKMQQ----EELDLLIIGGGITGAGVAVQAAAS-G-----IKTGLIEMQD 65 (571)
T ss_dssp HHHHHHHHHHHHH----SCBSEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSS
T ss_pred ccCHHHHHHhccc----CCCCEEEECcCHHHHHHHHHHHHC-C-----CcEEEEeCCC
Confidence 3456555655432 236799999999999999999999 9 8999999864
No 350
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=95.18 E-value=0.095 Score=48.93 Aligned_cols=36 Identities=25% Similarity=0.350 Sum_probs=26.5
Q ss_pred hcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeecc
Q 022050 158 VWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (303)
Q Consensus 158 ~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nG 199 (303)
+.++|+||+|+|.....+..+... .. +..||++..-
T Consensus 75 ~~~vDvVf~atp~~~s~~~a~~~~---~a---G~~VId~s~~ 110 (350)
T 2ep5_A 75 HKDVDVVLSALPNELAESIELELV---KN---GKIVVSNASP 110 (350)
T ss_dssp GTTCSEEEECCCHHHHHHHHHHHH---HT---TCEEEECSST
T ss_pred hcCCCEEEECCChHHHHHHHHHHH---HC---CCEEEECCcc
Confidence 478999999999987776666543 33 6678887754
No 351
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=95.13 E-value=0.026 Score=51.08 Aligned_cols=63 Identities=16% Similarity=0.270 Sum_probs=33.6
Q ss_pred eccCCchhhhhhHHHHHhccC-----------CCCCceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhh
Q 022050 19 HHTNGSLEERLDELRRLMGKA-----------EGDPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (303)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~-----------~~~~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (303)
||.-|+||...++--+++... .-..+++.|.|+ |-+|.++|..|++. | .+|++.+|+++.++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~l~~k~vlVTGas~GIG~aia~~la~~-G-----~~V~~~~r~~~~~~ 79 (293)
T 3rih_A 6 HHHMGTLEAQTQGPGSMLVVESAEPAERKVMFDLSARSVLVTGGTKGIGRGIATVFARA-G-----ANVAVAARSPRELS 79 (293)
T ss_dssp ----------------------------CCTTCCTTCEEEETTTTSHHHHHHHHHHHHT-T-----CEEEEEESSGGGGH
T ss_pred ccccchhhhhhcCCceeeeecCCCCcccccccCCCCCEEEEeCCCcHHHHHHHHHHHHC-C-----CEEEEEECCHHHHH
Confidence 677788888777744443321 111246778887 78999999999999 9 89999999987765
Q ss_pred h
Q 022050 87 R 87 (303)
Q Consensus 87 ~ 87 (303)
+
T Consensus 80 ~ 80 (293)
T 3rih_A 80 S 80 (293)
T ss_dssp H
T ss_pred H
Confidence 4
No 352
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=95.10 E-value=0.24 Score=50.03 Aligned_cols=39 Identities=26% Similarity=0.292 Sum_probs=33.0
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
.||+|||+|.+|+.++..|+.. |. ..++++|.+.=....
T Consensus 18 s~VlVVGaGGLGsevak~La~a-GV----G~ItlvD~D~Ve~SN 56 (640)
T 1y8q_B 18 GRVLVVGAGGIGCELLKNLVLT-GF----SHIDLIDLDTIDVSN 56 (640)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TC----CEEEEEECCBCCGGG
T ss_pred CeEEEECcCHHHHHHHHHHHHc-CC----CeEEEecCCEEChhh
Confidence 7899999999999999999999 93 589999988633333
No 353
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=95.09 E-value=0.017 Score=55.06 Aligned_cols=33 Identities=27% Similarity=0.324 Sum_probs=31.0
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~ 82 (303)
++|+|||+|..|.+.|..|++. | ++|+++++.+
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~-G-----~~V~viE~~~ 55 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQH-D-----VDVTVYTDRK 55 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHT-T-----CEEEEEESCC
T ss_pred CCEEEECCcHHHHHHHHHHHHC-C-----CeEEEEcCCC
Confidence 5899999999999999999999 9 8999999876
No 354
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=95.02 E-value=0.076 Score=49.37 Aligned_cols=34 Identities=18% Similarity=0.262 Sum_probs=25.8
Q ss_pred CceEEEEC-CChHHHHHHHHHHHhcCCCCCCeeEEEEe
Q 022050 43 PLRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRIWR 79 (303)
Q Consensus 43 ~~kI~VIG-aG~mG~aiA~~La~~~G~~~~~~~V~l~~ 79 (303)
++||+|+| .|.+|..+...|..+ + + +..+++.+.
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~-~-~-p~~elv~i~ 37 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQER-E-F-PVDELFLLA 37 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHT-T-C-CEEEEEEEE
T ss_pred ccEEEEECCCCHHHHHHHHHHhcC-C-C-CCEEEEEEE
Confidence 58999999 799999999998876 3 1 114666554
No 355
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=95.01 E-value=0.029 Score=51.64 Aligned_cols=57 Identities=14% Similarity=0.201 Sum_probs=33.4
Q ss_pred eccCCchhhhhhHHHHHhccCCCCCceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhh
Q 022050 19 HHTNGSLEERLDELRRLMGKAEGDPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (303)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (303)
||.-|++++--+.+..+ .+|||.|.|+ |.+|+.++..|.+..| ++|++++|+++...
T Consensus 6 ~~~~~~~~~~~~~~~~m------~~~~vlVtGatG~iG~~l~~~L~~~~g-----~~V~~~~r~~~~~~ 63 (372)
T 3slg_A 6 HHHMGTLEAQTQGPGSM------KAKKVLILGVNGFIGHHLSKRILETTD-----WEVFGMDMQTDRLG 63 (372)
T ss_dssp -----------------------CCCEEEEESCSSHHHHHHHHHHHHHSS-----CEEEEEESCCTTTG
T ss_pred cccccchhhhhcCCccc------CCCEEEEECCCChHHHHHHHHHHhCCC-----CEEEEEeCChhhhh
Confidence 56667776655555443 2589999996 9999999999988524 89999999886554
No 356
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=94.99 E-value=0.019 Score=49.04 Aligned_cols=38 Identities=24% Similarity=0.261 Sum_probs=34.2
Q ss_pred CceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhh
Q 022050 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (303)
Q Consensus 43 ~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (303)
+|||.|.|+ |.+|..++..|++. | ++|++++|+++..+
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~~~~ 42 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNR-G-----FEVTAVVRHPEKIK 42 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTT-T-----CEEEEECSCGGGCC
T ss_pred CCEEEEEcCCchHHHHHHHHHHHC-C-----CEEEEEEcCcccch
Confidence 589999996 99999999999999 8 89999999987543
No 357
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=94.99 E-value=0.029 Score=46.73 Aligned_cols=36 Identities=22% Similarity=0.240 Sum_probs=33.1
Q ss_pred ceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchh
Q 022050 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSV 85 (303)
Q Consensus 44 ~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~ 85 (303)
|||.|.|+ |.+|..++..|++. | ++|++++|+++..
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~-g-----~~V~~~~r~~~~~ 40 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQA-G-----YEVTVLVRDSSRL 40 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT-T-----CEEEEEESCGGGS
T ss_pred CEEEEEcCCcHHHHHHHHHHHHC-C-----CeEEEEEeChhhc
Confidence 79999999 99999999999999 8 8999999987654
No 358
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=94.99 E-value=0.02 Score=52.23 Aligned_cols=34 Identities=26% Similarity=0.558 Sum_probs=30.9
Q ss_pred CceEEEECCChHHHHHHHHHHH---hcCCCCCCeeEEEEecCC
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQD---SYGYLRDKVLIRIWRRPG 82 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~---~~G~~~~~~~V~l~~r~~ 82 (303)
|++|+|||+|..|.+.|..|++ . | ++|+++++++
T Consensus 1 m~dV~IIGaG~aGl~~A~~L~~~~~~-G-----~~V~v~Ek~~ 37 (342)
T 3qj4_A 1 MAQVLIVGAGMTGSLCAALLRRQTSG-P-----LYLAVWDKAD 37 (342)
T ss_dssp CEEEEEECCSHHHHHHHHHHHSCC-C-C-----EEEEEECSSS
T ss_pred CCcEEEECCcHHHHHHHHHHHhhccC-C-----ceEEEEECCC
Confidence 4689999999999999999999 8 8 8999999864
No 359
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.97 E-value=0.054 Score=49.86 Aligned_cols=36 Identities=14% Similarity=0.021 Sum_probs=32.0
Q ss_pred CCceEEEECCChHHHH-HHHHHHHhcCCCCCCeeEEEEecCCc
Q 022050 42 DPLRIVGVGAGAWGSV-FTAMLQDSYGYLRDKVLIRIWRRPGR 83 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~a-iA~~La~~~G~~~~~~~V~l~~r~~~ 83 (303)
.+|||.|||.|.+|.+ +|..|.+. | ++|+++|+.+.
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~-G-----~~V~~~D~~~~ 39 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEA-G-----FEVSGCDAKMY 39 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHT-T-----CEEEEEESSCC
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhC-C-----CEEEEEcCCCC
Confidence 4689999999999995 99999998 9 99999999763
No 360
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=94.96 E-value=0.04 Score=51.34 Aligned_cols=23 Identities=30% Similarity=0.572 Sum_probs=20.8
Q ss_pred CceEEEECCChHHHHHHHHHHHh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDS 65 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~ 65 (303)
++||+|||+|.||..++..+.++
T Consensus 3 ~irvgIiG~G~VG~~~~~~l~~~ 25 (332)
T 2ejw_A 3 ALKIALLGGGTVGSAFYNLVLER 25 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT
T ss_pred eeEEEEEcCCHHHHHHHHHHHhC
Confidence 47999999999999999998775
No 361
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=94.96 E-value=0.021 Score=48.66 Aligned_cols=37 Identities=24% Similarity=0.256 Sum_probs=33.2
Q ss_pred ceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhh
Q 022050 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (303)
Q Consensus 44 ~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (303)
|||.|.|+ |.+|..++..|++. | ++|++++|+++..+
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~-g-----~~V~~~~R~~~~~~ 38 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTT-D-----YQIYAGARKVEQVP 38 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTS-S-----CEEEEEESSGGGSC
T ss_pred CeEEEECCCCHHHHHHHHHHHHC-C-----CEEEEEECCccchh
Confidence 79999995 99999999999998 8 89999999986543
No 362
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.95 E-value=0.059 Score=47.38 Aligned_cols=36 Identities=14% Similarity=0.081 Sum_probs=32.2
Q ss_pred CCCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 022050 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (303)
Q Consensus 41 ~~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~ 82 (303)
...++|.|||+|.+|..-+..|.+. | .+|++++++.
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~~-G-----A~VtVvap~~ 64 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQE-G-----AAITVVAPTV 64 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGGG-C-----CCEEEECSSC
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHC-C-----CEEEEECCCC
Confidence 3458999999999999999999998 8 8999999865
No 363
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=94.91 E-value=0.051 Score=51.12 Aligned_cols=38 Identities=29% Similarity=0.278 Sum_probs=29.4
Q ss_pred HhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeeccC
Q 022050 157 AVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (303)
Q Consensus 157 a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nGi 200 (303)
.+.++|+||+|+|.....+..+++. .. ++.+|.++.-+
T Consensus 76 ~~~~vDvvf~a~p~~~s~~~a~~~~---~~---G~~vIDlSa~~ 113 (359)
T 4dpl_A 76 LMDDVDIIFSPLPQGAAGPVEEQFA---KE---GFPVISNSPDH 113 (359)
T ss_dssp GCTTCCEEEECCCTTTHHHHHHHHH---HT---TCEEEECSSTT
T ss_pred HhcCCCEEEECCChHHHHHHHHHHH---HC---CCEEEEcCCCc
Confidence 3578999999999998877777653 33 67888887654
No 364
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=94.91 E-value=0.051 Score=51.12 Aligned_cols=38 Identities=29% Similarity=0.278 Sum_probs=29.4
Q ss_pred HhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeeccC
Q 022050 157 AVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (303)
Q Consensus 157 a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nGi 200 (303)
.+.++|+||+|+|.....+..+++. .. ++.+|.++.-+
T Consensus 76 ~~~~vDvvf~a~p~~~s~~~a~~~~---~~---G~~vIDlSa~~ 113 (359)
T 4dpk_A 76 LMDDVDIIFSPLPQGAAGPVEEQFA---KE---GFPVISNSPDH 113 (359)
T ss_dssp GCTTCCEEEECCCTTTHHHHHHHHH---HT---TCEEEECSSTT
T ss_pred HhcCCCEEEECCChHHHHHHHHHHH---HC---CCEEEEcCCCc
Confidence 3578999999999998877777653 33 67888887654
No 365
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=94.89 E-value=0.027 Score=50.44 Aligned_cols=35 Identities=23% Similarity=0.223 Sum_probs=31.9
Q ss_pred CceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 022050 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (303)
Q Consensus 43 ~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~ 83 (303)
+|+|.|.|+ |.+|..++..|.+. | ++|++++|++.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~-g-----~~V~~~~R~~~ 39 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISL-G-----HPTYVLFRPEV 39 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT-T-----CCEEEECCSCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC-C-----CcEEEEECCCc
Confidence 588999997 99999999999998 8 89999999853
No 366
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=94.88 E-value=0.03 Score=52.35 Aligned_cols=35 Identities=20% Similarity=0.464 Sum_probs=32.1
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~ 83 (303)
.++|+|||+|..|.++|..|++. | .+|+++++.+.
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~-G-----~~v~v~E~~~~ 60 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQN-G-----IDVSVYERDND 60 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-T-----CEEEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-C-----CCEEEEeCCCC
Confidence 46899999999999999999998 8 89999998764
No 367
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=94.87 E-value=0.037 Score=50.43 Aligned_cols=48 Identities=17% Similarity=0.136 Sum_probs=38.6
Q ss_pred hhhHHHHHhccCCCCCceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCch
Q 022050 28 RLDELRRLMGKAEGDPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (303)
Q Consensus 28 ~~~~~~~~~~~~~~~~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (303)
++++....|.+. +|||.|.|+ |.+|+.++..|.+. | ++|++++|+...
T Consensus 13 ~~~~~~~~~~~~---~~~vlVtGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~~ 61 (351)
T 3ruf_A 13 RYEEITQQLIFS---PKTWLITGVAGFIGSNLLEKLLKL-N-----QVVIGLDNFSTG 61 (351)
T ss_dssp HHHHHHHHHHHS---CCEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEECCSSC
T ss_pred HHhhHHhhCCCC---CCeEEEECCCcHHHHHHHHHHHHC-C-----CEEEEEeCCCCC
Confidence 445555555543 489999997 99999999999998 8 899999997653
No 368
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=94.81 E-value=0.033 Score=50.97 Aligned_cols=34 Identities=29% Similarity=0.343 Sum_probs=31.3
Q ss_pred CceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 022050 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (303)
Q Consensus 43 ~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~ 82 (303)
+|||.|.|+ |.+|..++..|.+. | ++|++++|++
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~-g-----~~V~~l~R~~ 44 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDA-H-----RPTYILARPG 44 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHT-T-----CCEEEEECSS
T ss_pred CCeEEEECCCcHHHHHHHHHHHHC-C-----CCEEEEECCC
Confidence 478999999 99999999999998 8 8999999987
No 369
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=94.79 E-value=0.14 Score=50.66 Aligned_cols=55 Identities=20% Similarity=0.153 Sum_probs=41.3
Q ss_pred hhhhHHHHHhccCCCC---CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhh
Q 022050 27 ERLDELRRLMGKAEGD---PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (303)
Q Consensus 27 ~~~~~~~~~~~~~~~~---~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (303)
+|.+.-.++++..... ..||.|||+|.+|+.+|..|+.. |. ..++++|.+.=...
T Consensus 13 ~rY~Rqi~l~G~~~q~~L~~~~VlvvG~GGlGseiak~La~a-GV----g~itlvD~D~Ve~s 70 (531)
T 1tt5_A 13 QKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLP-GI----GSFTIIDGNQVSGE 70 (531)
T ss_dssp HHTHHHHHHHHHHHHHHHHHCEEEEECCSHHHHHHHHHHHTT-TC----SEEEEECCCBBCHH
T ss_pred HHhhHHHHhcCHHHHHHHhcCeEEEECcCHHHHHHHHHHHHc-CC----CeEEEEeCCEechh
Confidence 4666555566654422 36899999999999999999999 93 58999998863333
No 370
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=94.73 E-value=0.17 Score=52.14 Aligned_cols=41 Identities=22% Similarity=0.307 Sum_probs=33.6
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRA 88 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~ 88 (303)
..||+|||+|.+|+.++..|+.. |. .+++++|.+.=....+
T Consensus 411 ~~~vlvvG~GglG~~~~~~L~~~-Gv----g~i~l~D~d~v~~snl 451 (805)
T 2nvu_B 411 TCKVLVIGAGGLGCELLKNLALS-GF----RQIHVIDMDTIDVSNL 451 (805)
T ss_dssp TCCEEEECCSSHHHHHHHHHHTT-TC----CEEEEEECCBCCGGGG
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CC----CcEEEECCCeeccccc
Confidence 36899999999999999999998 83 5899999986433333
No 371
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=94.66 E-value=0.028 Score=51.69 Aligned_cols=35 Identities=17% Similarity=0.226 Sum_probs=31.7
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~ 82 (303)
....|+|||+|..|.+.|..|++. | .+|+++++..
T Consensus 16 ~~~dvvIIGgG~~Gl~~A~~La~~-G-----~~V~llE~~~ 50 (382)
T 1ryi_A 16 RHYEAVVIGGGIIGSAIAYYLAKE-N-----KNTALFESGT 50 (382)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC-C-----CcEEEEeCCC
Confidence 346899999999999999999999 8 8999999864
No 372
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=94.65 E-value=0.12 Score=46.59 Aligned_cols=40 Identities=20% Similarity=0.306 Sum_probs=34.7
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
.+++.|+|+|-.+.+++..|++. |. .+|++++|+.++.++
T Consensus 125 ~~~~lilGaGGaarai~~aL~~~-g~----~~i~i~nRt~~ra~~ 164 (269)
T 3tum_A 125 GKRALVIGCGGVGSAIAYALAEA-GI----ASITLCDPSTARMGA 164 (269)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TC----SEEEEECSCHHHHHH
T ss_pred cCeEEEEecHHHHHHHHHHHHHh-CC----CeEEEeCCCHHHHHH
Confidence 47899999999999999999998 72 589999999887654
No 373
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=94.64 E-value=0.04 Score=50.59 Aligned_cols=34 Identities=26% Similarity=0.350 Sum_probs=30.8
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~ 82 (303)
...|+|||+|.+|.+.|..|++. | .+|+++++..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~-G-----~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARK-G-----YSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-C-----CEEEEEeccC
Confidence 36899999999999999999999 8 8999999853
No 374
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=94.63 E-value=0.076 Score=51.49 Aligned_cols=89 Identities=17% Similarity=0.176 Sum_probs=61.9
Q ss_pred CceEEEECCC----hHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhh
Q 022050 43 PLRIVGVGAG----AWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVE 118 (303)
Q Consensus 43 ~~kI~VIGaG----~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~ 118 (303)
+++|+|||++ .+|..+...|.+. | ...|..+++....+ .
T Consensus 8 p~siAVvGas~~~~~~g~~v~~~l~~~-g----~~~v~pVnP~~~~i-----------------------------~--- 50 (457)
T 2csu_A 8 PKGIAVIGASNDPKKLGYEVFKNLKEY-K----KGKVYPVNIKEEEV-----------------------------Q--- 50 (457)
T ss_dssp CSEEEEETCCSCTTSHHHHHHHHHTTC-C----SSEEEEECSSCSEE-----------------------------T---
T ss_pred CCeEEEECcCCCCCchHHHHHHHHHHc-C----CCEEEEECCCCCeE-----------------------------C---
Confidence 5889999998 8899999998765 4 15666666553211 0
Q ss_pred hhhcCCcccchhhhhccccccCCCCCCCCeEEecCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeec
Q 022050 119 ARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (303)
Q Consensus 119 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~n 198 (303)
.+.+..++.++.+..|+++++||+....++++++... . -..++.++.
T Consensus 51 ----------------------------G~~~y~sl~~lp~~~Dlavi~vp~~~~~~~v~e~~~~-G----i~~vv~~s~ 97 (457)
T 2csu_A 51 ----------------------------GVKAYKSVKDIPDEIDLAIIVVPKRFVKDTLIQCGEK-G----VKGVVIITA 97 (457)
T ss_dssp ----------------------------TEECBSSTTSCSSCCSEEEECSCHHHHHHHHHHHHHH-T----CCEEEECCC
T ss_pred ----------------------------CEeccCCHHHcCCCCCEEEEecCHHHHHHHHHHHHHc-C----CCEEEEecC
Confidence 1223334445445789999999999999999887653 2 235677888
Q ss_pred cCc
Q 022050 199 GVE 201 (303)
Q Consensus 199 Gi~ 201 (303)
|+.
T Consensus 98 G~~ 100 (457)
T 2csu_A 98 GFG 100 (457)
T ss_dssp SST
T ss_pred CCC
Confidence 885
No 375
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=94.61 E-value=0.029 Score=50.57 Aligned_cols=33 Identities=18% Similarity=0.341 Sum_probs=30.8
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~ 82 (303)
++|+|||+|..|.++|..|++. | .+|+++++.+
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~-G-----~~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAA-G-----HQVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHC-C-----CcEEEEECCC
Confidence 5799999999999999999999 9 8999999875
No 376
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=94.60 E-value=0.032 Score=52.43 Aligned_cols=33 Identities=33% Similarity=0.422 Sum_probs=30.7
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~ 82 (303)
|+|+|||+|..|.+.|..|++. | .+|+++++++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~-G-----~~V~vlE~~~ 33 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARN-G-----HEIIVLEKSA 33 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT-T-----CEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHC-C-----CeEEEEeCCC
Confidence 6899999999999999999999 9 8999999864
No 377
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=94.58 E-value=0.034 Score=51.53 Aligned_cols=55 Identities=18% Similarity=0.172 Sum_probs=35.4
Q ss_pred hhhhhhHHHHHhccCCCCCceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCch
Q 022050 25 LEERLDELRRLMGKAEGDPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (303)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (303)
+--|=+.|.+.|....-.+|+|.|.|+ |.+|..++..|++. | .++|++++|++..
T Consensus 14 ~~~~~~~m~~~~~~~~~~~~~ilVtGatG~iG~~l~~~L~~~-g----~~~V~~~~r~~~~ 69 (377)
T 2q1s_A 14 LVPRGSHMPVIMNASKLANTNVMVVGGAGFVGSNLVKRLLEL-G----VNQVHVVDNLLSA 69 (377)
T ss_dssp ------------CCGGGTTCEEEEETTTSHHHHHHHHHHHHT-T----CSEEEEECCCTTC
T ss_pred cccccccCCCCCChHHhCCCEEEEECCccHHHHHHHHHHHHc-C----CceEEEEECCCCC
Confidence 344555666666655556689999997 99999999999988 6 1689999997643
No 378
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=94.48 E-value=0.12 Score=48.40 Aligned_cols=38 Identities=13% Similarity=-0.001 Sum_probs=29.0
Q ss_pred HhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeeccC
Q 022050 157 AVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (303)
Q Consensus 157 a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~nGi 200 (303)
.+.++|+||+|+|.....+..+++. +. ++.+|+++.-+
T Consensus 60 ~~~~~Dvvf~a~~~~~s~~~a~~~~---~~---G~~vID~Sa~~ 97 (344)
T 3tz6_A 60 DPSGLDIALFSAGSAMSKVQAPRFA---AA---GVTVIDNSSAW 97 (344)
T ss_dssp CCTTCSEEEECSCHHHHHHHHHHHH---HT---TCEEEECSSTT
T ss_pred HhccCCEEEECCChHHHHHHHHHHH---hC---CCEEEECCCcc
Confidence 3578999999999988777777654 33 67888887654
No 379
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=94.44 E-value=0.029 Score=54.72 Aligned_cols=36 Identities=25% Similarity=0.344 Sum_probs=32.0
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCch
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (303)
.++|.|||+|..|.++|..|++. | .+|+++++.+..
T Consensus 11 ~~dVlIVGaGpaGl~~A~~La~~-G-----~~v~vlE~~~~~ 46 (500)
T 2qa1_A 11 DAAVIVVGAGPAGMMLAGELRLA-G-----VEVVVLERLVER 46 (500)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESCCC-
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-C-----CCEEEEeCCCCC
Confidence 36799999999999999999999 9 899999987653
No 380
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=94.36 E-value=0.034 Score=50.82 Aligned_cols=32 Identities=19% Similarity=0.249 Sum_probs=30.0
Q ss_pred EEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 022050 46 IVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (303)
Q Consensus 46 I~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~ 83 (303)
|+|||+|.-|++.|..|++. | ++|+++++.++
T Consensus 7 ViIVGaGpaGl~~A~~La~~-G-----~~V~v~Er~~~ 38 (397)
T 3oz2_A 7 VLVVGGGPGGSTAARYAAKY-G-----LKTLMIEKRPE 38 (397)
T ss_dssp EEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSSS
T ss_pred EEEECcCHHHHHHHHHHHHC-C-----CcEEEEeCCCC
Confidence 99999999999999999999 9 99999998764
No 381
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=94.34 E-value=0.04 Score=48.91 Aligned_cols=38 Identities=18% Similarity=0.241 Sum_probs=33.2
Q ss_pred ceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 44 ~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
+++.|.|+ |.+|.+++..|++. | ++|++.+|+++.++.
T Consensus 33 k~vlVTGasggIG~~la~~l~~~-G-----~~V~~~~r~~~~~~~ 71 (279)
T 1xg5_A 33 RLALVTGASGGIGAAVARALVQQ-G-----LKVVGCARTVGNIEE 71 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHC-C-----CEEEEEECChHHHHH
Confidence 67899987 89999999999999 9 899999998866543
No 382
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=94.29 E-value=0.03 Score=54.81 Aligned_cols=36 Identities=14% Similarity=0.122 Sum_probs=31.8
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~ 83 (303)
+++||+|||+|.-|...|..|.+. + ++|+|+++++.
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~-~-----~~VtLId~~~~ 76 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTK-K-----YNVSIISPRSY 76 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTT-T-----CEEEEEESSSE
T ss_pred CCCCEEEECCcHHHHHHHHHhhhC-C-----CcEEEECCCCC
Confidence 457999999999999999999887 6 89999999864
No 383
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=94.29 E-value=0.048 Score=49.61 Aligned_cols=36 Identities=28% Similarity=0.211 Sum_probs=32.0
Q ss_pred CCceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 022050 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (303)
Q Consensus 42 ~~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~ 83 (303)
.+|+|.|.|+ |.+|..++..|++. | ++|++++|+..
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~ 62 (343)
T 2b69_A 26 DRKRILITGGAGFVGSHLTDKLMMD-G-----HEVTVVDNFFT 62 (343)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEECCSS
T ss_pred CCCEEEEEcCccHHHHHHHHHHHHC-C-----CEEEEEeCCCc
Confidence 4589999998 99999999999998 8 89999998754
No 384
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=94.24 E-value=0.095 Score=48.62 Aligned_cols=23 Identities=26% Similarity=0.447 Sum_probs=20.6
Q ss_pred CceEEEECCChHHHHHHHHHHHh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDS 65 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~ 65 (303)
++||+|+|+|.||+.++..+.++
T Consensus 4 ~irVgIiG~G~VG~~~~~~L~~~ 26 (325)
T 3ing_A 4 EIRIILMGTGNVGLNVLRIIDAS 26 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH
T ss_pred eEEEEEEcCcHHHHHHHHHHHhc
Confidence 47899999999999999999763
No 385
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=94.23 E-value=0.07 Score=50.13 Aligned_cols=24 Identities=29% Similarity=0.430 Sum_probs=21.5
Q ss_pred CCceEEEECCChHHHHHHHHHHHh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDS 65 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~ 65 (303)
.++||+|||+|.||..++..+.+.
T Consensus 3 k~i~vgIiG~G~VG~~~~~~l~~~ 26 (358)
T 1ebf_A 3 KVVNVAVIGAGVVGSAFLDQLLAM 26 (358)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHC
T ss_pred ceEEEEEEecCHHHHHHHHHHHhc
Confidence 358999999999999999999875
No 386
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=94.21 E-value=0.041 Score=51.44 Aligned_cols=33 Identities=27% Similarity=0.428 Sum_probs=30.6
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~ 82 (303)
|+|+|||+|..|.+.|..|+++ | ++|++++++.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~-G-----~~V~vlE~~~ 33 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKA-G-----HEVEVFERLP 33 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHT-T-----CEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhC-C-----CceEEEeCCC
Confidence 6899999999999999999999 9 8999998864
No 387
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=94.21 E-value=0.045 Score=50.35 Aligned_cols=33 Identities=24% Similarity=0.280 Sum_probs=30.7
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~ 82 (303)
..|+|||+|..|.+.|..|++. | .+|+++++.+
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~-G-----~~V~vie~~~ 36 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQ-G-----VKTLLVDAFD 36 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhC-C-----CeEEEEeCCC
Confidence 6899999999999999999999 8 8999999864
No 388
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=94.18 E-value=0.045 Score=51.30 Aligned_cols=35 Identities=9% Similarity=0.048 Sum_probs=31.3
Q ss_pred CceEEEECCChHHHHHHHHHHH---hcCCCCCCeeEEEEecCCc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQD---SYGYLRDKVLIRIWRRPGR 83 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~---~~G~~~~~~~V~l~~r~~~ 83 (303)
|++|+|||+|..|.+.|..|++ . | ++|+++++++.
T Consensus 1 m~~VvIIGgG~aGl~aA~~L~~~~~~-g-----~~V~vie~~~~ 38 (409)
T 3h8l_A 1 MTKVLVLGGRFGALTAAYTLKRLVGS-K-----ADVKVINKSRF 38 (409)
T ss_dssp -CEEEEECSSHHHHHHHHHHHHHHGG-G-----SEEEEEESSSE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCC-C-----CeEEEEeCCCC
Confidence 4789999999999999999999 7 7 89999998874
No 389
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=94.17 E-value=0.078 Score=48.15 Aligned_cols=34 Identities=12% Similarity=0.154 Sum_probs=28.9
Q ss_pred CCceEEEECCCh-HHHHHHHHHHHhcCCCCCCeeEEEEecC
Q 022050 42 DPLRIVGVGAGA-WGSVFTAMLQDSYGYLRDKVLIRIWRRP 81 (303)
Q Consensus 42 ~~~kI~VIGaG~-mG~aiA~~La~~~G~~~~~~~V~l~~r~ 81 (303)
.-++++|||+|. +|..+|..|... | ..|+++++.
T Consensus 149 ~Gk~vvVvG~s~iVG~plA~lL~~~-g-----AtVtv~~~~ 183 (276)
T 3ngx_A 149 HENTVTIVNRSPVVGRPLSMMLLNR-N-----YTVSVCHSK 183 (276)
T ss_dssp CSCEEEEECCCTTTHHHHHHHHHHT-T-----CEEEEECTT
T ss_pred CCCEEEEEcCChHHHHHHHHHHHHC-C-----CeEEEEeCC
Confidence 348999999985 899999999998 8 789988754
No 390
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=94.16 E-value=0.054 Score=48.13 Aligned_cols=38 Identities=16% Similarity=0.167 Sum_probs=33.4
Q ss_pred ceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 44 ~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
+++.|.|+ |.+|.++|..|++. | ++|++.+|+++.+++
T Consensus 31 k~vlVTGas~GIG~aia~~l~~~-G-----~~Vi~~~r~~~~~~~ 69 (281)
T 3ppi_A 31 ASAIVSGGAGGLGEATVRRLHAD-G-----LGVVIADLAAEKGKA 69 (281)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHC-C-----CEEEEEeCChHHHHH
Confidence 67889998 89999999999999 9 899999999876654
No 391
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=94.08 E-value=0.058 Score=51.94 Aligned_cols=35 Identities=11% Similarity=0.191 Sum_probs=31.9
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~ 83 (303)
.+||.|||.|..|.+.|..|++. | ++|+++|+++.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~-G-----~~V~~~D~~~~ 43 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKL-G-----AIVTVNDGKPF 43 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHT-T-----CEEEEEESSCG
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC-C-----CEEEEEeCCcc
Confidence 47999999999999999999998 9 99999999763
No 392
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=94.08 E-value=0.13 Score=47.83 Aligned_cols=23 Identities=30% Similarity=0.683 Sum_probs=20.4
Q ss_pred CceEEEEC-CChHHHHHHHHHHHh
Q 022050 43 PLRIVGVG-AGAWGSVFTAMLQDS 65 (303)
Q Consensus 43 ~~kI~VIG-aG~mG~aiA~~La~~ 65 (303)
+|||+|+| .|.+|..+...|.++
T Consensus 6 ~~kV~IiGAtG~iG~~llr~L~~~ 29 (340)
T 2hjs_A 6 PLNVAVVGATGSVGEALVGLLDER 29 (340)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHT
T ss_pred CcEEEEECCCCHHHHHHHHHHHhC
Confidence 37999999 599999999999865
No 393
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=94.07 E-value=0.11 Score=47.49 Aligned_cols=33 Identities=21% Similarity=0.295 Sum_probs=28.5
Q ss_pred CceEEEECCCh-HHHHHHHHHHHhcCCCCCCeeEEEEecC
Q 022050 43 PLRIVGVGAGA-WGSVFTAMLQDSYGYLRDKVLIRIWRRP 81 (303)
Q Consensus 43 ~~kI~VIGaG~-mG~aiA~~La~~~G~~~~~~~V~l~~r~ 81 (303)
-++++|||+|. +|..+|..|+.. | ..|++..+.
T Consensus 160 Gk~vvVvGrs~iVG~p~A~lL~~~-g-----AtVtv~h~~ 193 (285)
T 3p2o_A 160 GKDAVIIGASNIVGRPMATMLLNA-G-----ATVSVCHIK 193 (285)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHT-T-----CEEEEECTT
T ss_pred CCEEEEECCCchHHHHHHHHHHHC-C-----CeEEEEeCC
Confidence 38999999987 699999999998 7 789988754
No 394
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=94.03 E-value=0.048 Score=49.44 Aligned_cols=33 Identities=18% Similarity=0.281 Sum_probs=30.9
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~ 82 (303)
..|+|||+|..|.+.|..|++. | ++|+++++.+
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~-G-----~~V~vlE~~~ 37 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAG-G-----HEVLVAEAAE 37 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhC-C-----CeEEEEeCCC
Confidence 6899999999999999999999 9 8999999974
No 395
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=94.03 E-value=0.031 Score=55.89 Aligned_cols=33 Identities=27% Similarity=0.415 Sum_probs=30.9
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~ 82 (303)
.+|+|||+|..|.+.|..|++. | .+|+++++.+
T Consensus 24 ~DVvIVGgG~AGl~aA~~Lar~-G-----~~V~LiEr~~ 56 (591)
T 3i3l_A 24 SKVAIIGGGPAGSVAGLTLHKL-G-----HDVTIYERSA 56 (591)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHcC-C-----CCEEEEcCCC
Confidence 6899999999999999999999 8 8999999874
No 396
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=93.99 E-value=0.086 Score=47.54 Aligned_cols=65 Identities=18% Similarity=0.010 Sum_probs=43.7
Q ss_pred cCcceeccCCchhhhhhHHHHHhccCCCCCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 14 SNGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
.+|-++.+|-+..--...|++. +. .-..+++.|+|+|.+|.++|..|++. | +|++++|+++++++
T Consensus 101 ~~g~l~g~nTd~~G~~~~L~~~-~~-~l~~k~vlV~GaGgiG~aia~~L~~~-G------~V~v~~r~~~~~~~ 165 (287)
T 1nvt_A 101 EDGKAIGYNTDGIGARMALEEE-IG-RVKDKNIVIYGAGGAARAVAFELAKD-N------NIIIANRTVEKAEA 165 (287)
T ss_dssp ETTEEEEECCHHHHHHHHHHHH-HC-CCCSCEEEEECCSHHHHHHHHHHTSS-S------EEEEECSSHHHHHH
T ss_pred eCCEEEEecCCHHHHHHHHHHh-CC-CcCCCEEEEECchHHHHHHHHHHHHC-C------CEEEEECCHHHHHH
Confidence 3565555554444434444432 11 12347899999999999999999877 4 79999999876654
No 397
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=93.97 E-value=0.057 Score=50.37 Aligned_cols=35 Identities=31% Similarity=0.449 Sum_probs=32.2
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~ 83 (303)
.++|+|||+|..|.+.|..|++. | ++|+++++.+.
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~-G-----~~v~v~E~~~~ 39 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDA-G-----VDVDVYERSPQ 39 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhC-C-----CCEEEEecCCC
Confidence 37899999999999999999999 8 89999998765
No 398
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=93.96 E-value=0.034 Score=53.37 Aligned_cols=34 Identities=21% Similarity=0.264 Sum_probs=30.7
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~ 82 (303)
|++|+|||+|--|.+-|..|+++ | ++|+++.++.
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~-G-----~~V~VlEa~~ 34 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAA-G-----IPVLLLEQRD 34 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHT-T-----CCEEEECCC-
T ss_pred CCCEEEECCcHHHHHHHHHHHHC-C-----CcEEEEccCC
Confidence 68999999999999999999999 9 8999998754
No 399
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=93.96 E-value=0.081 Score=49.26 Aligned_cols=22 Identities=23% Similarity=0.265 Sum_probs=20.6
Q ss_pred ceEEEECCChHHHHHHHHHHHh
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDS 65 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~ 65 (303)
+||+|+|+|.+|..+++.+..+
T Consensus 4 ikVgI~G~G~iGr~~~R~l~~~ 25 (335)
T 1u8f_O 4 VKVGVNGFGRIGRLVTRAAFNS 25 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH
T ss_pred eEEEEEccCHHHHHHHHHHHcC
Confidence 6999999999999999999876
No 400
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=93.96 E-value=0.041 Score=49.33 Aligned_cols=35 Identities=9% Similarity=0.061 Sum_probs=31.7
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~ 82 (303)
.+++|+|||+|.-|.+.|..|++. | ++|+++++.+
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~-g-----~~v~vie~~~ 55 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARA-E-----IKPILYEGMM 55 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-T-----CCCEEECCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-C-----CCEEEEecCC
Confidence 357999999999999999999999 8 8999999854
No 401
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=93.95 E-value=0.27 Score=52.33 Aligned_cols=56 Identities=11% Similarity=0.124 Sum_probs=40.2
Q ss_pred hhhhhHHHHHhccCCC---CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhh
Q 022050 26 EERLDELRRLMGKAEG---DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (303)
Q Consensus 26 ~~~~~~~~~~~~~~~~---~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (303)
++|.+.-.++++.... ...||+|+|+|.+|+.+|..|+.. |. ..++++|.+.=...
T Consensus 7 ~~rY~Rqi~l~G~~~q~rL~~s~VlIvG~GGlGseiak~La~a-GV----g~itlvD~D~V~~s 65 (1015)
T 3cmm_A 7 ESLYSRQLYVLGKEAMLKMQTSNVLILGLKGLGVEIAKNVVLA-GV----KSMTVFDPEPVQLA 65 (1015)
T ss_dssp HHHHHHHHHHSCHHHHHHHTTCEEEEECCSHHHHHHHHHHHHH-CC----SEEEEECCSBCCGG
T ss_pred hHhccchHhhcCHHHHHHHhcCEEEEECCChHHHHHHHHHHHc-CC----CeEEEecCCEechh
Confidence 3444443444444332 247899999999999999999999 93 58999998753333
No 402
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=93.91 E-value=0.062 Score=49.52 Aligned_cols=35 Identities=23% Similarity=0.192 Sum_probs=31.7
Q ss_pred ceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCch
Q 022050 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (303)
Q Consensus 44 ~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (303)
|+|.|.|+ |.+|..++..|++. | ++|++++|+++.
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~~ 60 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEK-G-----YEVHGIVRRSSS 60 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEECCCSS
T ss_pred cEEEEECCCchHHHHHHHHHHHC-C-----CEEEEEECCccc
Confidence 68999996 99999999999998 8 899999998653
No 403
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=93.86 E-value=0.062 Score=52.89 Aligned_cols=35 Identities=23% Similarity=0.283 Sum_probs=31.5
Q ss_pred CCceEEEECCChHHHHHHHHHHH---hcCCCCCCeeEEEEecCC
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQD---SYGYLRDKVLIRIWRRPG 82 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~---~~G~~~~~~~V~l~~r~~ 82 (303)
..++|+|||+|..|.+.|..|++ . | .+|+++++.+
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~-G-----~~V~liE~~~ 61 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQG-T-----ADITLLQAPD 61 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTT-S-----SEEEEEECCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCC-C-----CcEEEEeCCC
Confidence 34789999999999999999999 7 7 8999999864
No 404
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=93.81 E-value=0.095 Score=47.88 Aligned_cols=34 Identities=24% Similarity=0.171 Sum_probs=29.0
Q ss_pred CCceEEEECCCh-HHHHHHHHHHHhcCCCCCCeeEEEEecC
Q 022050 42 DPLRIVGVGAGA-WGSVFTAMLQDSYGYLRDKVLIRIWRRP 81 (303)
Q Consensus 42 ~~~kI~VIGaG~-mG~aiA~~La~~~G~~~~~~~V~l~~r~ 81 (303)
..++++|||+|. +|..+|..|... | ..|+++++.
T Consensus 158 ~gk~vvVIG~s~iVG~p~A~lL~~~-g-----AtVtv~hs~ 192 (288)
T 1b0a_A 158 FGLNAVVIGASNIVGRPMSMELLLA-G-----CTTTVTHRF 192 (288)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTT-T-----CEEEEECSS
T ss_pred CCCEEEEECCChHHHHHHHHHHHHC-C-----CeEEEEeCC
Confidence 348999999996 599999999988 7 789988654
No 405
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=93.80 E-value=0.053 Score=48.41 Aligned_cols=37 Identities=16% Similarity=0.208 Sum_probs=32.8
Q ss_pred ceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhh
Q 022050 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (303)
Q Consensus 44 ~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (303)
+++.|.|+ |.+|.++|..|++. | ++|++.+|+++.++
T Consensus 30 k~vlVTGas~gIG~aia~~L~~~-G-----~~V~~~~r~~~~~~ 67 (276)
T 2b4q_A 30 RIALVTGGSRGIGQMIAQGLLEA-G-----ARVFICARDAEACA 67 (276)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEECSCHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHC-C-----CEEEEEeCCHHHHH
Confidence 67899997 89999999999999 9 89999999986554
No 406
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=93.80 E-value=0.12 Score=47.03 Aligned_cols=33 Identities=21% Similarity=0.203 Sum_probs=28.1
Q ss_pred CceEEEECCCh-HHHHHHHHHHHhcCCCCCCeeEEEEecC
Q 022050 43 PLRIVGVGAGA-WGSVFTAMLQDSYGYLRDKVLIRIWRRP 81 (303)
Q Consensus 43 ~~kI~VIGaG~-mG~aiA~~La~~~G~~~~~~~V~l~~r~ 81 (303)
-++++|||+|. +|..+|..|... | ..|++..+.
T Consensus 161 Gk~vvVIG~s~iVG~p~A~lL~~~-g-----AtVtv~hs~ 194 (285)
T 3l07_A 161 GAYAVVVGASNVVGKPVSQLLLNA-K-----ATVTTCHRF 194 (285)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHT-T-----CEEEEECTT
T ss_pred CCEEEEECCCchhHHHHHHHHHHC-C-----CeEEEEeCC
Confidence 37999999987 799999999988 7 788888653
No 407
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=93.77 E-value=0.043 Score=50.25 Aligned_cols=33 Identities=12% Similarity=0.188 Sum_probs=30.6
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~ 82 (303)
..|+|||+|..|.+.|..|++. | .+|+++++..
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~-G-----~~V~vle~~~ 35 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRA-G-----LNVLMTDAHM 35 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHT-T-----CCEEEECSSC
T ss_pred CCEEEECCCHHHHHHHHHHHHC-C-----CeEEEEecCC
Confidence 5799999999999999999999 8 8999999865
No 408
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=93.75 E-value=0.088 Score=46.59 Aligned_cols=39 Identities=10% Similarity=0.150 Sum_probs=33.7
Q ss_pred CceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 43 ~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
.++|.|.|+ |.+|.+++..|++. | ++|++.+|+++..+.
T Consensus 31 ~k~vlITGasggIG~~la~~L~~~-G-----~~V~~~~r~~~~~~~ 70 (272)
T 1yb1_A 31 GEIVLITGAGHGIGRLTAYEFAKL-K-----SKLVLWDINKHGLEE 70 (272)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHC-C-----CEEEEEEcCHHHHHH
Confidence 378999987 89999999999999 9 899999999865543
No 409
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=93.74 E-value=0.051 Score=50.01 Aligned_cols=33 Identities=21% Similarity=0.278 Sum_probs=30.6
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~ 82 (303)
.+|+|||+|..|.+.|..|++. | .+|+++++..
T Consensus 6 ~dVvIIGgGi~Gl~~A~~La~~-G-----~~V~lle~~~ 38 (382)
T 1y56_B 6 SEIVVIGGGIVGVTIAHELAKR-G-----EEVTVIEKRF 38 (382)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-C-----CeEEEEeCCC
Confidence 5799999999999999999999 8 8999999874
No 410
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=93.72 E-value=0.065 Score=49.58 Aligned_cols=35 Identities=20% Similarity=0.261 Sum_probs=32.0
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~ 83 (303)
.++|+|||+|..|.+.|..|++. | .+|+++++.+.
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~-G-----~~v~viE~~~~ 45 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQN-G-----WDVRLHEKSSE 45 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-C-----CCEEEEecCCC
Confidence 36899999999999999999999 8 89999998764
No 411
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=93.71 E-value=0.14 Score=47.13 Aligned_cols=34 Identities=15% Similarity=0.107 Sum_probs=28.9
Q ss_pred CCceEEEECCCh-HHHHHHHHHHHhcCCCCCCeeEEEEecC
Q 022050 42 DPLRIVGVGAGA-WGSVFTAMLQDSYGYLRDKVLIRIWRRP 81 (303)
Q Consensus 42 ~~~kI~VIGaG~-mG~aiA~~La~~~G~~~~~~~V~l~~r~ 81 (303)
..++++|||+|. +|..+|..|... | ..|+++++.
T Consensus 164 ~gk~vvVIG~s~iVG~p~A~lL~~~-g-----AtVtv~hs~ 198 (301)
T 1a4i_A 164 AGRHAVVVGRSKIVGAPMHDLLLWN-N-----ATVTTCHSK 198 (301)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHT-T-----CEEEEECTT
T ss_pred CCCEEEEECCCchHHHHHHHHHHhC-C-----CeEEEEECC
Confidence 348999999996 799999999988 7 789988643
No 412
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=93.65 E-value=0.069 Score=46.85 Aligned_cols=33 Identities=12% Similarity=0.049 Sum_probs=30.3
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~ 82 (303)
++|+|||+|.-|.+.|..|++. | ++|+++++++
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~-g-----~~v~lie~~~ 35 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRA-R-----KNILLVDAGE 35 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEECCC
T ss_pred CCEEEECCCHHHHHHHHHHHhC-C-----CCEEEEeCCC
Confidence 6899999999999999999998 8 8999999754
No 413
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=93.65 E-value=0.098 Score=48.05 Aligned_cols=33 Identities=21% Similarity=0.238 Sum_probs=28.9
Q ss_pred CceEEEECCCh-HHHHHHHHHHHhcCCCCCCeeEEEEecC
Q 022050 43 PLRIVGVGAGA-WGSVFTAMLQDSYGYLRDKVLIRIWRRP 81 (303)
Q Consensus 43 ~~kI~VIGaG~-mG~aiA~~La~~~G~~~~~~~V~l~~r~ 81 (303)
-++++|||+|. +|..+|..|... | ..|+++++.
T Consensus 165 Gk~vvVIG~s~iVG~p~A~lL~~~-g-----AtVtv~~~~ 198 (300)
T 4a26_A 165 GKRAVVLGRSNIVGAPVAALLMKE-N-----ATVTIVHSG 198 (300)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHT-T-----CEEEEECTT
T ss_pred CCEEEEECCCchHHHHHHHHHHHC-C-----CeEEEEeCC
Confidence 37999999877 799999999998 8 789999874
No 414
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=93.61 E-value=0.073 Score=50.14 Aligned_cols=34 Identities=24% Similarity=0.372 Sum_probs=31.0
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCe-eEEEEecCCc
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGR 83 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~-~V~l~~r~~~ 83 (303)
..|+|||+|..|.+.|..|++. | . +|+++++++.
T Consensus 7 ~dVvIIGgG~aGlsaA~~La~~-G-----~~~V~vlE~~~~ 41 (438)
T 3dje_A 7 SSLLIVGAGTWGTSTALHLARR-G-----YTNVTVLDPYPV 41 (438)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-T-----CCCEEEEESSCS
T ss_pred CCEEEECCCHHHHHHHHHHHHc-C-----CCcEEEEeCCCC
Confidence 5799999999999999999999 9 8 8999998753
No 415
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=93.61 E-value=0.084 Score=51.37 Aligned_cols=37 Identities=19% Similarity=0.155 Sum_probs=32.8
Q ss_pred CCCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 022050 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (303)
Q Consensus 41 ~~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~ 83 (303)
...++|+|||+|..|.+.|..|++. | .+|+++++.+.
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~-G-----~~V~liEk~~~ 126 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALL-G-----ARVVLVEKRIK 126 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESCSS
T ss_pred cCCCCEEEECccHHHHHHHHHHHHC-C-----CeEEEEEeccc
Confidence 3457999999999999999999998 8 89999998753
No 416
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=93.61 E-value=0.054 Score=50.53 Aligned_cols=33 Identities=24% Similarity=0.516 Sum_probs=30.9
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~ 82 (303)
.+|+|||+|..|.+.|..|++. | .+|+++++++
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~-G-----~~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKS-G-----FKVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTT-T-----CCEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhC-C-----CCEEEEeCCC
Confidence 6899999999999999999999 8 8999999875
No 417
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=93.59 E-value=0.096 Score=50.63 Aligned_cols=33 Identities=30% Similarity=0.518 Sum_probs=30.1
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCe---eEEEEe----cC
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV---LIRIWR----RP 81 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~---~V~l~~----r~ 81 (303)
..||+|+|||..|.+++..|... | . +|++++ |+
T Consensus 186 ~~rvlvlGAGgAg~aia~~L~~~-G-----~~~~~I~vvd~~~~R~ 225 (439)
T 2dvm_A 186 EITLALFGAGAAGFATLRILTEA-G-----VKPENVRVVELVNGKP 225 (439)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHT-T-----CCGGGEEEEEEETTEE
T ss_pred CCEEEEECccHHHHHHHHHHHHc-C-----CCcCeEEEEEccCCCc
Confidence 37899999999999999999998 8 5 799999 87
No 418
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=93.59 E-value=0.065 Score=49.73 Aligned_cols=33 Identities=21% Similarity=0.292 Sum_probs=30.7
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~ 82 (303)
..|+|||+|..|.+.|..|++. | .+|+++++.+
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~~-G-----~~V~vlE~~~ 37 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAER-G-----HRVLVLERHT 37 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHHC-C-----CeEEEEeCCC
Confidence 5799999999999999999999 9 8999999875
No 419
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=93.58 E-value=0.1 Score=47.14 Aligned_cols=39 Identities=10% Similarity=0.096 Sum_probs=34.2
Q ss_pred CceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 43 ~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
.+++.|.|+ |.+|.++|..|++. | ++|++.+|+++.+++
T Consensus 31 gk~vlVTGas~gIG~~la~~l~~~-G-----~~V~~~~r~~~~~~~ 70 (301)
T 3tjr_A 31 GRAAVVTGGASGIGLATATEFARR-G-----ARLVLSDVDQPALEQ 70 (301)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC-C-----CEEEEEECCHHHHHH
Confidence 367999998 78999999999999 9 899999999876654
No 420
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=93.58 E-value=0.075 Score=47.13 Aligned_cols=33 Identities=9% Similarity=-0.030 Sum_probs=30.5
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecC
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRP 81 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~ 81 (303)
+++|+|||+|.-|.+.|..|++. | ++|++++++
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~-g-----~~v~lie~~ 47 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARY-M-----LKTLVIGET 47 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESS
T ss_pred ccCEEEECccHHHHHHHHHHHHC-C-----CcEEEEecc
Confidence 36899999999999999999998 8 899999986
No 421
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=93.54 E-value=0.16 Score=47.72 Aligned_cols=98 Identities=14% Similarity=0.195 Sum_probs=60.2
Q ss_pred CCCceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhh
Q 022050 41 GDPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (303)
Q Consensus 41 ~~~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~ 119 (303)
.-|.||+|+|+ |..|.-+.+.|..+ . ..++..+.... +..+ . +.+ ..+.+.
T Consensus 11 ~~~~~V~IvGAtG~vG~ellrlL~~h-P----~~el~~l~S~~-~aG~----~----~~~-------------~~p~~~- 62 (351)
T 1vkn_A 11 HHMIRAGIIGATGYTGLELVRLLKNH-P----EAKITYLSSRT-YAGK----K----LEE-------------IFPSTL- 62 (351)
T ss_dssp -CCEEEEEESTTSHHHHHHHHHHHHC-T----TEEEEEEECST-TTTS----B----HHH-------------HCGGGC-
T ss_pred cceeEEEEECCCCHHHHHHHHHHHcC-C----CcEEEEEeCcc-cccC----C----hHH-------------hChhhc-
Confidence 34679999998 99999999999976 3 25666655322 1110 0 000 011110
Q ss_pred hhcCCcccchhhhhccccccCCCCCCCCeEEe-cCHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEEEEeec
Q 022050 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVV-TNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (303)
Q Consensus 120 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t-~d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~iivs~~n 198 (303)
. .+.+. .|.++...++|++|+|+|...-.++.+++ . ++.||++++
T Consensus 63 --~------------------------~l~~~~~~~~~~~~~~Dvvf~alp~~~s~~~~~~~-----~---g~~VIDlSs 108 (351)
T 1vkn_A 63 --E------------------------NSILSEFDPEKVSKNCDVLFTALPAGASYDLVREL-----K---GVKIIDLGA 108 (351)
T ss_dssp --C------------------------CCBCBCCCHHHHHHHCSEEEECCSTTHHHHHHTTC-----C---SCEEEESSS
T ss_pred --c------------------------CceEEeCCHHHhhcCCCEEEECCCcHHHHHHHHHh-----C---CCEEEECCh
Confidence 0 11111 24444336899999999999877777665 3 688998886
Q ss_pred cC
Q 022050 199 GV 200 (303)
Q Consensus 199 Gi 200 (303)
-+
T Consensus 109 df 110 (351)
T 1vkn_A 109 DF 110 (351)
T ss_dssp TT
T ss_pred hh
Confidence 54
No 422
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=93.49 E-value=0.079 Score=45.62 Aligned_cols=37 Identities=16% Similarity=0.179 Sum_probs=32.4
Q ss_pred CceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchh
Q 022050 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSV 85 (303)
Q Consensus 43 ~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~ 85 (303)
|++|.|.|+ |.+|.+++..|++. | ++|++.+|+++..
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~~-g-----~~V~~~~r~~~~~ 38 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLARA-G-----HTVIGIDRGQADI 38 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESSSSSE
T ss_pred CcEEEEeCCCcHHHHHHHHHHHhC-C-----CEEEEEeCChhHc
Confidence 357999998 99999999999999 8 8999999987643
No 423
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=93.45 E-value=0.082 Score=47.15 Aligned_cols=36 Identities=25% Similarity=0.298 Sum_probs=32.7
Q ss_pred ceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchh
Q 022050 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSV 85 (303)
Q Consensus 44 ~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~ 85 (303)
|||.|.|+ |.+|+.++..|++. | ++|++++|+++..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~~~ 37 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVEL-G-----YEVVVVDNLSSGR 37 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEECCCSSCC
T ss_pred CEEEEECCCChHHHHHHHHHHhC-C-----CEEEEEeCCCCCc
Confidence 78999999 99999999999999 8 8999999987643
No 424
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=93.44 E-value=0.067 Score=49.21 Aligned_cols=34 Identities=18% Similarity=0.231 Sum_probs=31.4
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~ 83 (303)
..|+|||+|..|.+.|..|++. | .+|+++++++.
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~-G-----~~V~l~E~~~~ 38 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKY-G-----LKTLMIEKRPE 38 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHC-C-----CCEEEEeCCCC
Confidence 5799999999999999999999 9 89999999873
No 425
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=93.42 E-value=0.066 Score=49.77 Aligned_cols=35 Identities=17% Similarity=0.323 Sum_probs=32.0
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~ 83 (303)
.++|+|||+|..|.+.|..|++. | .+|+++++.+.
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~-G-----~~V~viE~~~~ 40 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQ-G-----HRVVVVEQARR 40 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-C-----CcEEEEeCCCC
Confidence 36899999999999999999999 8 89999998764
No 426
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=93.42 E-value=0.068 Score=48.54 Aligned_cols=37 Identities=22% Similarity=0.271 Sum_probs=31.5
Q ss_pred CCceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCch
Q 022050 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (303)
Q Consensus 42 ~~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (303)
..|+|.|.|+ |.+|..++..|++. | ++|++++|+++.
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~-G-----~~V~~~~r~~~~ 55 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQ-G-----RTVRGFDLRPSG 55 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHT-T-----CCEEEEESSCCS
T ss_pred CCCEEEEECCCChHHHHHHHHHHhC-C-----CEEEEEeCCCCC
Confidence 4589999999 99999999999999 8 899999998753
No 427
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=93.41 E-value=0.16 Score=47.31 Aligned_cols=22 Identities=23% Similarity=0.277 Sum_probs=20.2
Q ss_pred ceEEEECCChHHHHHHHHHHHh
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDS 65 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~ 65 (303)
+||+|+|+|.+|..+++.+..+
T Consensus 4 ikVgI~G~GrIGr~l~R~l~~~ 25 (337)
T 3e5r_O 4 IKIGINGFGRIGRLVARVALQS 25 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTC
T ss_pred eEEEEECcCHHHHHHHHHHhCC
Confidence 5999999999999999998865
No 428
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=93.30 E-value=0.086 Score=50.18 Aligned_cols=34 Identities=26% Similarity=0.376 Sum_probs=31.2
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCe--eEEEEecCC
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV--LIRIWRRPG 82 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~--~V~l~~r~~ 82 (303)
.++|+|||+|..|.+.|..|++. | . +|+++++.+
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~-G-----~~~~V~v~E~~~ 41 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAE-K-----AFDQVTLFERRG 41 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-T-----CCSEEEEECSSS
T ss_pred CCEEEEECccHHHHHHHHHHHhc-C-----CCCCeEEEecCC
Confidence 47899999999999999999998 8 7 999999875
No 429
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=93.30 E-value=0.081 Score=47.14 Aligned_cols=35 Identities=23% Similarity=0.241 Sum_probs=32.5
Q ss_pred CceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 022050 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (303)
Q Consensus 43 ~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~ 83 (303)
+|||.|.|+ |.+|+.++..|++. | ++|++.+|++.
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~ 42 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVAS-G-----EEVTVLDDLRV 42 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-T-----CCEEEECCCSS
T ss_pred CCeEEEECCCChHHHHHHHHHHHC-C-----CEEEEEecCCc
Confidence 589999999 99999999999999 8 89999999875
No 430
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=93.28 E-value=0.17 Score=49.32 Aligned_cols=36 Identities=31% Similarity=0.376 Sum_probs=33.3
Q ss_pred CceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCch
Q 022050 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (303)
Q Consensus 43 ~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (303)
+|||.|.|+ |.+|+.++..|.+. | ++|++++|++..
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~-G-----~~V~~l~R~~~~ 183 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTG-G-----HEVIQLVRKEPK 183 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT-T-----CEEEEEESSSCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC-C-----CEEEEEECCCCC
Confidence 799999996 99999999999999 8 899999998764
No 431
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=93.28 E-value=0.069 Score=51.03 Aligned_cols=34 Identities=12% Similarity=0.282 Sum_probs=31.2
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~ 83 (303)
..|+|||+|..|.+.|..|++. | .+|+++++.+.
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~~-G-----~~V~llEk~~~ 60 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAEE-G-----ANVLLLDKGNK 60 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHC-C-----CCEEEEECCCC
Confidence 5799999999999999999998 8 89999998763
No 432
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=93.24 E-value=0.13 Score=50.51 Aligned_cols=38 Identities=21% Similarity=0.240 Sum_probs=32.3
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
+++.|+|+|-+|.+++..|++. | .+|++++|+.+++++
T Consensus 365 k~vlV~GaGGig~aia~~L~~~-G-----~~V~i~~R~~~~a~~ 402 (523)
T 2o7s_A 365 KTVVVIGAGGAGKALAYGAKEK-G-----AKVVIANRTYERALE 402 (523)
T ss_dssp -CEEEECCSHHHHHHHHHHHHH-C-----C-CEEEESSHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHC-C-----CEEEEEECCHHHHHH
Confidence 5799999999999999999999 9 789999999876543
No 433
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=93.23 E-value=0.2 Score=47.03 Aligned_cols=49 Identities=16% Similarity=0.230 Sum_probs=37.0
Q ss_pred hhHHHHHhccCCCCCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 022050 29 LDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (303)
Q Consensus 29 ~~~~~~~~~~~~~~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~ 83 (303)
++++-+-.+..+-.-++|+|+|.|++|...|..+... | ..|+++|++++
T Consensus 161 ~~~~~~~~G~~~L~GktV~I~G~GnVG~~~A~~l~~~-G-----akVvvsD~~~~ 209 (355)
T 1c1d_A 161 MKATVAHRGLGSLDGLTVLVQGLGAVGGSLASLAAEA-G-----AQLLVADTDTE 209 (355)
T ss_dssp HHHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHH
T ss_pred HHHHHHhcCCCCCCCCEEEEECcCHHHHHHHHHHHHC-C-----CEEEEEeCCcc
Confidence 3443333454233448999999999999999999988 8 78999988754
No 434
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=93.22 E-value=0.11 Score=46.77 Aligned_cols=38 Identities=8% Similarity=-0.042 Sum_probs=32.6
Q ss_pred CceEEEECCC---hHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhh
Q 022050 43 PLRIVGVGAG---AWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (303)
Q Consensus 43 ~~kI~VIGaG---~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (303)
.+++.|.|++ .+|.++|..|++. | .+|.+.+|+++..+
T Consensus 30 ~k~vlVTGasg~~GIG~~ia~~la~~-G-----~~V~~~~r~~~~~~ 70 (296)
T 3k31_A 30 GKKGVIIGVANDKSLAWGIAKAVCAQ-G-----AEVALTYLSETFKK 70 (296)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHT-T-----CEEEEEESSGGGHH
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHC-C-----CEEEEEeCChHHHH
Confidence 3679999996 8999999999999 9 89999999975433
No 435
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=93.19 E-value=0.36 Score=45.37 Aligned_cols=41 Identities=17% Similarity=0.233 Sum_probs=29.3
Q ss_pred CHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCCC--EEEEeeccC
Q 022050 153 NLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVP--VIISLAKGV 200 (303)
Q Consensus 153 d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~--iivs~~nGi 200 (303)
+.++ +.++|+||+|+|.....+..+.+.. . +. +||++..-+
T Consensus 59 ~~~~-~~~~DvVf~a~g~~~s~~~a~~~~~---~---G~k~vVID~ss~~ 101 (367)
T 1t4b_A 59 DLEA-LKALDIIVTCQGGDYTNEIYPKLRE---S---GWQGYWIDAASSL 101 (367)
T ss_dssp CHHH-HHTCSEEEECSCHHHHHHHHHHHHH---T---TCCCEEEECSSTT
T ss_pred ChHH-hcCCCEEEECCCchhHHHHHHHHHH---C---CCCEEEEcCChhh
Confidence 4444 5689999999998877777776543 2 43 788877654
No 436
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=93.18 E-value=0.16 Score=46.36 Aligned_cols=33 Identities=24% Similarity=0.222 Sum_probs=28.0
Q ss_pred CceEEEECCCh-HHHHHHHHHHHhcCCCCCCeeEEEEecC
Q 022050 43 PLRIVGVGAGA-WGSVFTAMLQDSYGYLRDKVLIRIWRRP 81 (303)
Q Consensus 43 ~~kI~VIGaG~-mG~aiA~~La~~~G~~~~~~~V~l~~r~ 81 (303)
-++++|||.|. +|..+|..|+.. | ..|++..+.
T Consensus 161 Gk~vvVvGrs~iVG~plA~lL~~~-g-----AtVtv~hs~ 194 (286)
T 4a5o_A 161 GMDAVVVGASNIVGRPMALELLLG-G-----CTVTVTHRF 194 (286)
T ss_dssp TCEEEEECTTSTTHHHHHHHHHHT-T-----CEEEEECTT
T ss_pred CCEEEEECCCchhHHHHHHHHHHC-C-----CeEEEEeCC
Confidence 37999999876 899999999988 7 789887653
No 437
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=93.17 E-value=0.087 Score=49.44 Aligned_cols=34 Identities=29% Similarity=0.405 Sum_probs=31.5
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~ 83 (303)
|+|+|||+|..|.+.|..|++. | ++|+++++++.
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~-g-----~~v~v~E~~~~ 37 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEK-G-----HQVHIIDQRDH 37 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-T-----CEEEEEESSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHC-C-----CcEEEEEecCC
Confidence 7999999999999999999998 8 89999998764
No 438
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=93.14 E-value=0.072 Score=50.61 Aligned_cols=34 Identities=15% Similarity=0.132 Sum_probs=30.5
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCe--eEEEEecCC
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV--LIRIWRRPG 82 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~--~V~l~~r~~ 82 (303)
+++|+|||+|..|.+.|..|++. | + +|+++.+++
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~-G-----~~~~V~vlEa~~ 37 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRA-P-----CPPKVVLVESSE 37 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTS-S-----SCCEEEEECSSS
T ss_pred CceEEEECCcHHHHHHHHHHHhC-C-----CCCcEEEEeCCC
Confidence 36899999999999999999998 8 7 999998743
No 439
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=93.14 E-value=0.089 Score=49.27 Aligned_cols=34 Identities=21% Similarity=0.345 Sum_probs=31.4
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCee-EEEEecCCc
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGR 83 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~-V~l~~r~~~ 83 (303)
++|+|||+|..|.+.|..|++. | .+ |+++++.+.
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~~-G-----~~~v~v~E~~~~ 39 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQA-G-----IGKVTLLESSSE 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-----CSEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhC-C-----CCeEEEEECCCC
Confidence 6899999999999999999999 8 88 999998764
No 440
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=93.13 E-value=0.13 Score=45.12 Aligned_cols=40 Identities=15% Similarity=0.229 Sum_probs=34.5
Q ss_pred CCceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 42 ~~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
..+++.|.|+ |-+|.++|..|++. | ++|.+.+|+++.+++
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~-G-----~~V~~~~r~~~~~~~ 47 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEG-G-----AEVLLTGRNESNIAR 47 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHH
Confidence 3468899997 88999999999999 9 899999999876654
No 441
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=93.11 E-value=0.074 Score=49.26 Aligned_cols=34 Identities=24% Similarity=0.377 Sum_probs=31.4
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~ 83 (303)
.+|+|||+|..|.+.|..|++. | ++|+++++.+.
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~-G-----~~v~v~E~~~~ 36 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKA-G-----IDNVILERQTP 36 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-T-----CCEEEECSSCH
T ss_pred ccEEEECCCHHHHHHHHHHHHC-C-----CCEEEEeCCCC
Confidence 4799999999999999999999 9 89999998774
No 442
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=93.11 E-value=1.9 Score=38.48 Aligned_cols=117 Identities=11% Similarity=0.113 Sum_probs=66.6
Q ss_pred cceeccCCchhhh-hhHHHHHhccCCC-CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhH
Q 022050 16 GLIHHTNGSLEER-LDELRRLMGKAEG-DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHL 93 (303)
Q Consensus 16 ~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l 93 (303)
++....+.++++. ...++.++..... ...+|.-||||. |. ++..+++..| .+|+.+|.+++.++..++.
T Consensus 62 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~-G~-~~~~la~~~~-----~~v~gvD~s~~~~~~a~~~-- 132 (318)
T 2fk8_A 62 AYFEPPELTLEEAQYAKVDLNLDKLDLKPGMTLLDIGCGW-GT-TMRRAVERFD-----VNVIGLTLSKNQHARCEQV-- 132 (318)
T ss_dssp CCCSSTTCCHHHHHHHHHHHHHTTSCCCTTCEEEEESCTT-SH-HHHHHHHHHC-----CEEEEEESCHHHHHHHHHH--
T ss_pred eeeCCCCCCHHHHHHHHHHHHHHhcCCCCcCEEEEEcccc-hH-HHHHHHHHCC-----CEEEEEECCHHHHHHHHHH--
Confidence 4443344455332 2333445554442 347999999998 43 3445554325 6899999998876543211
Q ss_pred HHHHhhhhhHHHHhhhhcccchhhhhhhcCCcccchhhhhccccccCCCCCCCCeEE-ecCHHHHhcCCCEEEEe-----
Q 022050 94 FEVINSREDVLRRLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKV-VTNLQEAVWDADIVING----- 167 (303)
Q Consensus 94 ~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~-t~d~~~a~~~aDlVIia----- 167 (303)
... . .+. .++.+ ..|..+.-...|+|+..
T Consensus 133 ---~~~----------~--~~~------------------------------~~v~~~~~d~~~~~~~fD~v~~~~~l~~ 167 (318)
T 2fk8_A 133 ---LAS----------I--DTN------------------------------RSRQVLLQGWEDFAEPVDRIVSIEAFEH 167 (318)
T ss_dssp ---HHT----------S--CCS------------------------------SCEEEEESCGGGCCCCCSEEEEESCGGG
T ss_pred ---HHh----------c--CCC------------------------------CceEEEECChHHCCCCcCEEEEeChHHh
Confidence 000 0 000 01222 23333322468999987
Q ss_pred cCchhHHHHHHHHHHHhhc
Q 022050 168 LPSTETKEVFEEISRYWKE 186 (303)
Q Consensus 168 Vp~~~~~~vl~~l~~~l~~ 186 (303)
++......+++++.+.+++
T Consensus 168 ~~~~~~~~~l~~~~~~Lkp 186 (318)
T 2fk8_A 168 FGHENYDDFFKRCFNIMPA 186 (318)
T ss_dssp TCGGGHHHHHHHHHHHSCT
T ss_pred cCHHHHHHHHHHHHHhcCC
Confidence 6666778899999999998
No 443
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=93.10 E-value=0.12 Score=50.37 Aligned_cols=34 Identities=26% Similarity=0.168 Sum_probs=31.8
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~ 82 (303)
.++|+|||+|.-|.+.|..|++. | ++|+++++++
T Consensus 43 ~~dVvIIGgG~aGl~aA~~l~~~-G-----~~V~liE~~~ 76 (523)
T 1mo9_A 43 EYDAIFIGGGAAGRFGSAYLRAM-G-----GRQLIVDRWP 76 (523)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-C-----CCEEEEeCCC
Confidence 47899999999999999999998 8 8999999986
No 444
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=93.09 E-value=0.085 Score=50.50 Aligned_cols=34 Identities=21% Similarity=0.262 Sum_probs=31.0
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~ 82 (303)
.++|+|||+|..|.+.|..|++. | ++|+++.+..
T Consensus 11 ~~~v~IIGaG~aGl~aA~~L~~~-g-----~~v~v~E~~~ 44 (489)
T 2jae_A 11 SHSVVVLGGGPAGLCSAFELQKA-G-----YKVTVLEART 44 (489)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-C-----CCEEEEeccC
Confidence 47999999999999999999998 8 8999998764
No 445
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=93.07 E-value=0.087 Score=48.03 Aligned_cols=38 Identities=18% Similarity=0.252 Sum_probs=30.2
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCC-CCCeeEEEEecCC
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYL-RDKVLIRIWRRPG 82 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~-~~~~~V~l~~r~~ 82 (303)
|.|+|||+|..|.+.|..|+++ |.. .++.+|+++++..
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~-G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHER-YHSVLQPLDIKVYADRF 39 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-HTTTSSSCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHh-ccccCCCceEEEEECCC
Confidence 6899999999999999999998 500 0015899999874
No 446
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=93.04 E-value=0.06 Score=52.57 Aligned_cols=49 Identities=20% Similarity=0.266 Sum_probs=32.3
Q ss_pred ccCCchhhhhhHHHHHhccCCCCCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 022050 20 HTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (303)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~ 82 (303)
|...|-+|.+++|. ....|.|||+|..|.+.|..|+++ | ++|.++++++
T Consensus 5 ~~~~~~~~~~~~~~--------~~~dv~iiG~G~~g~~~a~~l~~~-g-----~~v~~~e~~~ 53 (475)
T 3p1w_A 5 HHHSSGRENLYFQG--------EHYDVIILGTGLKECILSGLLSHY-G-----KKILVLDRNP 53 (475)
T ss_dssp ------------CC--------CEEEEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSS
T ss_pred cccccccccccccc--------ccCCEEEECCCHHHHHHHHHHHHC-C-----CcEEEEeccC
Confidence 33344466666542 236899999999999999999999 9 8999999986
No 447
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=93.02 E-value=0.071 Score=52.45 Aligned_cols=34 Identities=15% Similarity=0.148 Sum_probs=31.6
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~ 83 (303)
..|+|||+|..|.++|..|++. | .+|+++++.+.
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~~-G-----~~V~vlEr~~~ 60 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAHR-Q-----VGHLVVEQTDG 60 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSCS
T ss_pred CCEEEECcCHHHHHHHHHHHHC-C-----CCEEEEeCCCC
Confidence 6899999999999999999999 9 89999998764
No 448
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=93.01 E-value=0.36 Score=44.21 Aligned_cols=101 Identities=17% Similarity=0.223 Sum_probs=60.3
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhhhhhhhHHHHHhhhhhHHHHhhhhcccchhhhhhh
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 121 (303)
..++|..||||..|.+ +..+++..| ..|+.+|.+++.++..++. +.. .+ +.
T Consensus 122 ~g~rVLDIGcG~G~~t-a~~lA~~~g-----a~V~gIDis~~~l~~Ar~~-----~~~----------~g--l~------ 172 (298)
T 3fpf_A 122 RGERAVFIGGGPLPLT-GILLSHVYG-----MRVNVVEIEPDIAELSRKV-----IEG----------LG--VD------ 172 (298)
T ss_dssp TTCEEEEECCCSSCHH-HHHHHHTTC-----CEEEEEESSHHHHHHHHHH-----HHH----------HT--CC------
T ss_pred CcCEEEEECCCccHHH-HHHHHHccC-----CEEEEEECCHHHHHHHHHH-----HHh----------cC--CC------
Confidence 3489999999986533 222344225 6899999999877653311 000 00 00
Q ss_pred cCCcccchhhhhccccccCCCCCCCCeEEe-cCHHHH-hcCCCEEEEecCchhHHHHHHHHHHHhhccCCCCEE-EEeec
Q 022050 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVV-TNLQEA-VWDADIVINGLPSTETKEVFEEISRYWKERITVPVI-ISLAK 198 (303)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t-~d~~~a-~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~~ii-vs~~n 198 (303)
++++. .|..+. -...|+|+++.-.....++++++.+.+++ +..+ +....
T Consensus 173 -------------------------~v~~v~gDa~~l~d~~FDvV~~~a~~~d~~~~l~el~r~LkP---GG~Lvv~~~~ 224 (298)
T 3fpf_A 173 -------------------------GVNVITGDETVIDGLEFDVLMVAALAEPKRRVFRNIHRYVDT---ETRIIYRTYT 224 (298)
T ss_dssp -------------------------SEEEEESCGGGGGGCCCSEEEECTTCSCHHHHHHHHHHHCCT---TCEEEEEECC
T ss_pred -------------------------CeEEEECchhhCCCCCcCEEEECCCccCHHHHHHHHHHHcCC---CcEEEEEcCc
Confidence 22221 222221 24689999876555677899999999998 4544 44433
Q ss_pred c
Q 022050 199 G 199 (303)
Q Consensus 199 G 199 (303)
|
T Consensus 225 ~ 225 (298)
T 3fpf_A 225 G 225 (298)
T ss_dssp G
T ss_pred c
Confidence 3
No 449
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=93.01 E-value=0.079 Score=46.87 Aligned_cols=51 Identities=18% Similarity=0.057 Sum_probs=32.5
Q ss_pred hhhhhHHHHHhccCCCCCceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchh
Q 022050 26 EERLDELRRLMGKAEGDPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSV 85 (303)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~ 85 (303)
.++.+..+..|.+.. +++.|.|+ |-+|.++|..|++. | ++|++.+|+++..
T Consensus 13 ~~~~~~~~~~m~l~~---k~vlVTGas~gIG~aia~~l~~~-G-----~~V~~~~r~~~~~ 64 (260)
T 3gem_A 13 GRENLYFQGHMTLSS---APILITGASQRVGLHCALRLLEH-G-----HRVIISYRTEHAS 64 (260)
T ss_dssp --------------C---CCEEESSTTSHHHHHHHHHHHHT-T-----CCEEEEESSCCHH
T ss_pred cccCcccccCcCCCC---CEEEEECCCCHHHHHHHHHHHHC-C-----CEEEEEeCChHHH
Confidence 555555555565543 67889997 88999999999999 9 8999999998654
No 450
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=92.97 E-value=0.11 Score=43.32 Aligned_cols=35 Identities=23% Similarity=0.343 Sum_probs=31.1
Q ss_pred CCceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 022050 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (303)
Q Consensus 42 ~~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~ 83 (303)
.+|||.|.|+ |.+|.+++..|+ . | ++|++.+|+++
T Consensus 2 ~kM~vlVtGasg~iG~~~~~~l~-~-g-----~~V~~~~r~~~ 37 (202)
T 3d7l_A 2 NAMKILLIGASGTLGSAVKERLE-K-K-----AEVITAGRHSG 37 (202)
T ss_dssp CSCEEEEETTTSHHHHHHHHHHT-T-T-----SEEEEEESSSS
T ss_pred CCcEEEEEcCCcHHHHHHHHHHH-C-C-----CeEEEEecCcc
Confidence 3479999998 899999999999 8 8 89999999864
No 451
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=92.97 E-value=0.09 Score=47.23 Aligned_cols=33 Identities=15% Similarity=0.159 Sum_probs=30.5
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecC
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRP 81 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~ 81 (303)
..+|+|||+|.-|.+.|..|++. | ++|+++++.
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~-g-----~~v~lie~~ 40 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRA-Q-----LSTLILEKG 40 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHHc-C-----CcEEEEeCC
Confidence 36899999999999999999998 8 899999987
No 452
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=92.95 E-value=0.16 Score=48.64 Aligned_cols=35 Identities=26% Similarity=0.372 Sum_probs=31.4
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~ 82 (303)
..++|+|||+|..|.+.|..|++. | ++|+++.++.
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~-g-----~~v~vlE~~~ 66 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGA-G-----HQVTVLEASE 66 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHH-T-----CEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-C-----CeEEEEECCC
Confidence 357899999999999999999999 8 8999998764
No 453
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=92.95 E-value=0.081 Score=47.55 Aligned_cols=35 Identities=20% Similarity=0.172 Sum_probs=31.7
Q ss_pred CCceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 022050 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (303)
Q Consensus 42 ~~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~ 82 (303)
.+|+|.|.|+ |.+|..++..|++. | ++|++.+|++
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~-g-----~~V~~~~R~~ 38 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSF-S-----HPTFIYARPL 38 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHT-T-----CCEEEEECCC
T ss_pred cccEEEEEcCCchhHHHHHHHHHhC-C-----CcEEEEECCc
Confidence 3588999997 99999999999998 8 8999999986
No 454
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=92.93 E-value=0.097 Score=50.94 Aligned_cols=37 Identities=22% Similarity=0.319 Sum_probs=33.0
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCch
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (303)
..++|.|||+|..|.++|..|++. | .+|+++++.+..
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~-G-----~~v~vlE~~~~~ 47 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLG-G-----VDVMVLEQLPQR 47 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESCSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-C-----CCEEEEECCCCC
Confidence 347899999999999999999999 9 899999987653
No 455
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=92.92 E-value=0.11 Score=46.76 Aligned_cols=41 Identities=15% Similarity=0.123 Sum_probs=32.4
Q ss_pred cCCCCCceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCch
Q 022050 38 KAEGDPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (303)
Q Consensus 38 ~~~~~~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (303)
+.....|||.|.|+ |.+|..++..|++. | ++|++++|+++.
T Consensus 9 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~~ 50 (335)
T 1rpn_A 9 HHGSMTRSALVTGITGQDGAYLAKLLLEK-G-----YRVHGLVARRSS 50 (335)
T ss_dssp ------CEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEECCCSS
T ss_pred cccccCCeEEEECCCChHHHHHHHHHHHC-C-----CeEEEEeCCCcc
Confidence 34456799999998 99999999999998 8 899999998754
No 456
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=92.90 E-value=0.11 Score=46.60 Aligned_cols=35 Identities=23% Similarity=0.191 Sum_probs=31.1
Q ss_pred CceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 022050 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (303)
Q Consensus 43 ~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~ 83 (303)
||||.|.|+ |.+|..++..|++. | ++|++++|+..
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~ 36 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDE-G-----LSVVVVDNLQT 36 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEECCSS
T ss_pred CCEEEEECCCcHHHHHHHHHHHhC-C-----CEEEEEeCCCc
Confidence 589999986 99999999999998 8 89999998764
No 457
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=92.88 E-value=0.091 Score=47.87 Aligned_cols=33 Identities=27% Similarity=0.373 Sum_probs=30.6
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCe-eEEEEecCC
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPG 82 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~-~V~l~~r~~ 82 (303)
++|+|||+|..|.+.|..|++. | + +|+++++++
T Consensus 5 ~~vvIIGaG~aGl~aA~~l~~~-g-----~~~v~lie~~~ 38 (369)
T 3d1c_A 5 HKVAIIGAGAAGIGMAITLKDF-G-----ITDVIILEKGT 38 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-T-----CCCEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHc-C-----CCcEEEEecCC
Confidence 6899999999999999999998 8 8 899999875
No 458
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=92.83 E-value=0.14 Score=45.92 Aligned_cols=38 Identities=21% Similarity=0.229 Sum_probs=33.3
Q ss_pred ceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 44 ~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
+++.|.|+ |-+|.++|..|++. | .+|.+.+|+++.+++
T Consensus 29 k~~lVTGas~GIG~aia~~la~~-G-----~~V~~~~r~~~~~~~ 67 (283)
T 3v8b_A 29 PVALITGAGSGIGRATALALAAD-G-----VTVGALGRTRTEVEE 67 (283)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHT-T-----CEEEEEESSHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHH
Confidence 67889987 78999999999999 9 899999999876654
No 459
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=92.82 E-value=0.16 Score=45.29 Aligned_cols=38 Identities=21% Similarity=0.114 Sum_probs=30.8
Q ss_pred CceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEec-CCchhh
Q 022050 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRR-PGRSVD 86 (303)
Q Consensus 43 ~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r-~~~~~~ 86 (303)
.+++.|.|+ |-+|.++|..|++. | .+|.+.++ +++.++
T Consensus 29 ~k~~lVTGas~GIG~aia~~la~~-G-----~~V~~~~~~~~~~~~ 68 (280)
T 4da9_A 29 RPVAIVTGGRRGIGLGIARALAAS-G-----FDIAITGIGDAEGVA 68 (280)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESCCHHHHH
T ss_pred CCEEEEecCCCHHHHHHHHHHHHC-C-----CeEEEEeCCCHHHHH
Confidence 366888887 88999999999999 9 89999986 544443
No 460
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=92.78 E-value=0.13 Score=45.95 Aligned_cols=38 Identities=11% Similarity=0.156 Sum_probs=33.1
Q ss_pred ceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 44 ~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
+++.|.|+ |-+|.++|..|++. | ++|++.+|+++.+++
T Consensus 28 k~vlVTGas~GIG~aia~~l~~~-G-----~~V~~~~r~~~~~~~ 66 (277)
T 4dqx_A 28 RVCIVTGGGSGIGRATAELFAKN-G-----AYVVVADVNEDAAVR 66 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESSHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHH
Confidence 67888887 89999999999999 9 899999999876543
No 461
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=92.77 E-value=0.063 Score=49.01 Aligned_cols=33 Identities=18% Similarity=0.177 Sum_probs=30.1
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~ 82 (303)
.+.|+|||+|..|.+.|..|+ . | .+|+++++++
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La-~-G-----~~V~vlE~~~ 41 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS-A-H-----GRVVVLEREA 41 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-T-T-----SCEEEECSSS
T ss_pred cCCEEEECCcHHHHHHHHHHh-C-C-----CCEEEEECCC
Confidence 468999999999999999999 7 8 8999999874
No 462
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=92.74 E-value=0.084 Score=46.98 Aligned_cols=35 Identities=26% Similarity=0.228 Sum_probs=32.0
Q ss_pred CceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 022050 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (303)
Q Consensus 43 ~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~ 83 (303)
+|||.|.|+ |.+|..++..|++. | ++|++.+|+..
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~-g-----~~V~~l~R~~~ 39 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDL-G-----HPTFLLVREST 39 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT-T-----CCEEEECCCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC-C-----CCEEEEECCcc
Confidence 578999998 99999999999998 8 89999999864
No 463
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=92.73 E-value=0.11 Score=46.16 Aligned_cols=37 Identities=24% Similarity=0.197 Sum_probs=32.2
Q ss_pred ceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhh
Q 022050 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (303)
Q Consensus 44 ~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (303)
++|.|.|+ |.+|.+++..|++. | ++|++.+|+++..+
T Consensus 45 k~vlITGasggIG~~la~~L~~~-G-----~~V~~~~r~~~~~~ 82 (285)
T 2c07_A 45 KVALVTGAGRGIGREIAKMLAKS-V-----SHVICISRTQKSCD 82 (285)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTT-S-----SEEEEEESSHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHc-C-----CEEEEEcCCHHHHH
Confidence 57899987 89999999999998 8 89999998876554
No 464
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=92.73 E-value=0.1 Score=46.17 Aligned_cols=34 Identities=15% Similarity=0.203 Sum_probs=30.7
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEE-EecC
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRI-WRRP 81 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l-~~r~ 81 (303)
.+++|+|||+|.-|.+.|..|++. | ++|++ ++++
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~-g-----~~v~li~e~~ 37 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRG-G-----LKNVVMFEKG 37 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHH-T-----CSCEEEECSS
T ss_pred CCceEEEECCCHHHHHHHHHHHHC-C-----CCeEEEEeCC
Confidence 457999999999999999999999 8 89999 8874
No 465
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=92.72 E-value=0.088 Score=47.30 Aligned_cols=34 Identities=24% Similarity=0.302 Sum_probs=31.2
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~ 83 (303)
.+|+|||+|..|.+.|..|++. | ++|+++++++.
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~-g-----~~v~vie~~~~ 37 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRS-G-----LSYVILDAEAS 37 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHS-S-----CCEEEECCSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHC-C-----CCEEEEECCCC
Confidence 5799999999999999999998 8 89999998753
No 466
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=92.72 E-value=0.11 Score=50.75 Aligned_cols=34 Identities=24% Similarity=0.208 Sum_probs=31.1
Q ss_pred CceEEEECCChHHHHHHHHHHH---hcCCCCCCeeEEEEecCC
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQD---SYGYLRDKVLIRIWRRPG 82 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~---~~G~~~~~~~V~l~~r~~ 82 (303)
+.+|+|||+|..|.+.|..|++ . | .+|+++++.+
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~-G-----~~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQ-Q-----ANITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCS-S-----CEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCC-C-----CEEEEECCCC
Confidence 4689999999999999999999 8 8 8999999864
No 467
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=92.71 E-value=0.11 Score=46.70 Aligned_cols=35 Identities=20% Similarity=0.150 Sum_probs=31.5
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~ 83 (303)
+++|+|||+|.-|.+.|..|++. | ++|+++++++.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~-g-----~~v~lie~~~~ 39 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMR-G-----LSFRFVDPLPE 39 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESSSS
T ss_pred cCcEEEECCCHHHHHHHHHHHhC-C-----CCEEEEeCCCC
Confidence 46899999999999999999998 8 89999998753
No 468
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=92.71 E-value=0.093 Score=49.12 Aligned_cols=34 Identities=18% Similarity=0.153 Sum_probs=30.6
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~ 82 (303)
+++|+|||+|..|.+.|..|++. | ++|++++++.
T Consensus 1 ~~dVvVIGaG~aGl~aA~~L~~~-G-----~~V~vlE~~~ 34 (431)
T 3k7m_X 1 MYDAIVVGGGFSGLKAARDLTNA-G-----KKVLLLEGGE 34 (431)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHT-T-----CCEEEECSSS
T ss_pred CCCEEEECCcHHHHHHHHHHHHc-C-----CeEEEEecCC
Confidence 36899999999999999999999 9 8999998743
No 469
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=92.67 E-value=0.11 Score=44.62 Aligned_cols=39 Identities=18% Similarity=0.198 Sum_probs=32.6
Q ss_pred CceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 43 ~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
|+++.|.|+ |.+|.++|..|++. | .+|.+.+|+++.+++
T Consensus 1 Mk~vlVTGas~gIG~~~a~~l~~~-G-----~~V~~~~r~~~~~~~ 40 (230)
T 3guy_A 1 MSLIVITGASSGLGAELAKLYDAE-G-----KATYLTGRSESKLST 40 (230)
T ss_dssp --CEEEESTTSHHHHHHHHHHHHT-T-----CCEEEEESCHHHHHH
T ss_pred CCEEEEecCCchHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHH
Confidence 356889998 78999999999999 9 889999999876653
No 470
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=92.63 E-value=0.13 Score=45.31 Aligned_cols=54 Identities=17% Similarity=0.168 Sum_probs=35.2
Q ss_pred hhhhhHHHHHhccCCCCCceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 26 EERLDELRRLMGKAEGDPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
+..-......|... ..+++.|.|+ |.+|.++|..|++. | ++|.+.+|+++.++.
T Consensus 14 ~~~~~~~~~~m~~l--~~k~vlITGas~gIG~~la~~l~~~-G-----~~V~~~~r~~~~~~~ 68 (262)
T 3rkr_A 14 SGHIDDDDKHMSSL--SGQVAVVTGASRGIGAAIARKLGSL-G-----ARVVLTARDVEKLRA 68 (262)
T ss_dssp -----------CTT--TTCEEEESSTTSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHHH
T ss_pred cCCCCCCcchhhcc--CCCEEEEECCCChHHHHHHHHHHHC-C-----CEEEEEECCHHHHHH
Confidence 33334444444432 2367889987 89999999999999 9 899999999876654
No 471
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=92.63 E-value=1.1 Score=35.16 Aligned_cols=36 Identities=17% Similarity=0.131 Sum_probs=27.2
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEE-EecCC
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRI-WRRPG 82 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l-~~r~~ 82 (303)
..+++.|+|+|..|..++..+..+.| +++.. ++.++
T Consensus 3 ~~~~vlIiGaG~~g~~l~~~l~~~~g-----~~vvg~~d~~~ 39 (141)
T 3nkl_A 3 AKKKVLIYGAGSAGLQLANMLRQGKE-----FHPIAFIDDDR 39 (141)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHSSS-----EEEEEEECSCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-----cEEEEEEECCc
Confidence 34789999999999999999977524 67664 45443
No 472
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=92.62 E-value=0.14 Score=44.38 Aligned_cols=38 Identities=21% Similarity=0.249 Sum_probs=33.3
Q ss_pred ceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 44 ~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
+++.|.|+ |.+|.+++..|++. | ++|++.+|+++.++.
T Consensus 12 k~vlITGasggiG~~la~~l~~~-G-----~~V~~~~r~~~~~~~ 50 (254)
T 2wsb_A 12 ACAAVTGAGSGIGLEICRAFAAS-G-----ARLILIDREAAALDR 50 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHH
Confidence 67999988 99999999999999 9 899999999875543
No 473
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=92.55 E-value=0.16 Score=46.22 Aligned_cols=40 Identities=18% Similarity=0.160 Sum_probs=34.9
Q ss_pred CCceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 42 ~~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
..++|.|.|+ |.+|.++|..|++. | ++|++.+|+++.+++
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~-G-----~~Vv~~~r~~~~~~~ 47 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQ-G-----CKVAIADIRQDSIDK 47 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHT-T-----CEEEEEESCHHHHHH
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHC-C-----CEEEEEECCHHHHHH
Confidence 3468999998 89999999999999 9 899999999877654
No 474
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=92.55 E-value=0.087 Score=50.92 Aligned_cols=33 Identities=18% Similarity=0.242 Sum_probs=29.4
Q ss_pred ceEEEECCChHHHHHHHHHHH---hcCCCCCCeeEEEEecCC
Q 022050 44 LRIVGVGAGAWGSVFTAMLQD---SYGYLRDKVLIRIWRRPG 82 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~---~~G~~~~~~~V~l~~r~~ 82 (303)
++|+|||+|..|.+.|..|++ . | .+|+++++.+
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~-G-----~~V~lvE~~~ 38 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDD-R-----IDVTLVESGN 38 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGG-G-----SEEEEEEC--
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCC-C-----CEEEEEecCC
Confidence 589999999999999999999 8 8 8999999864
No 475
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=92.50 E-value=0.1 Score=46.49 Aligned_cols=35 Identities=14% Similarity=0.065 Sum_probs=31.7
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~ 83 (303)
+++|+|||+|.-|.+.|..|++. | ++|+++++++.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~-g-----~~v~lie~~~~ 41 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMR-Q-----ASVKIIESLPQ 41 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSSS
T ss_pred cceEEEECCCHHHHHHHHHHHHC-C-----CCEEEEEcCCC
Confidence 36899999999999999999998 8 89999999763
No 476
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=92.48 E-value=0.19 Score=44.62 Aligned_cols=51 Identities=10% Similarity=0.010 Sum_probs=36.5
Q ss_pred hhhhhHHHHHhccCCCCCceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 022050 26 EERLDELRRLMGKAEGDPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (303)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~ 82 (303)
-+|.--|+++|....-..+++.|.|+ |-+|.++|..|++. | .+|.+.+++.
T Consensus 14 ~~~~~~~~~mm~~~~l~gk~~lVTGas~GIG~aia~~la~~-G-----~~V~~~~~~~ 65 (271)
T 3v2g_A 14 GTENLYFQSMMTSISLAGKTAFVTGGSRGIGAAIAKRLALE-G-----AAVALTYVNA 65 (271)
T ss_dssp ------CHHHHTTTCCTTCEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESSC
T ss_pred cccccchhhhccccCCCCCEEEEeCCCcHHHHHHHHHHHHC-C-----CEEEEEeCCC
Confidence 45555566676655545578999997 78999999999999 9 8999887664
No 477
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=92.48 E-value=0.11 Score=46.72 Aligned_cols=34 Identities=21% Similarity=0.281 Sum_probs=31.3
Q ss_pred ceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 022050 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (303)
Q Consensus 44 ~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~ 83 (303)
+||.|.|+ |.+|..++..|.+. | ++|++++|++.
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~-g-----~~V~~l~R~~~ 46 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKL-G-----HPTYVFTRPNS 46 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHT-T-----CCEEEEECTTC
T ss_pred CeEEEECCCchHHHHHHHHHHHC-C-----CcEEEEECCCC
Confidence 48999997 99999999999998 8 89999999875
No 478
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=92.43 E-value=0.099 Score=51.92 Aligned_cols=34 Identities=24% Similarity=0.316 Sum_probs=30.8
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~ 83 (303)
..|+|||+|..|.++|..|++. | ++|+++++.+.
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~-G-----~~V~VlEr~~~ 83 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAG-G-----VGALVLEKLVE 83 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHT-T-----CCEEEEBSCSS
T ss_pred CCEEEECcCHHHHHHHHHHHHC-C-----CCEEEEcCCCC
Confidence 3699999999999999999999 9 89999998764
No 479
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=92.41 E-value=0.15 Score=45.74 Aligned_cols=39 Identities=18% Similarity=0.186 Sum_probs=34.1
Q ss_pred CceEEEEC-CChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 43 PLRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 43 ~~kI~VIG-aG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
.+++.|+| +|.+|.+++..|++. | .+|++++|++++.++
T Consensus 119 gk~vlVtGaaGGiG~aia~~L~~~-G-----~~V~i~~R~~~~~~~ 158 (287)
T 1lu9_A 119 GKKAVVLAGTGPVGMRSAALLAGE-G-----AEVVLCGRKLDKAQA 158 (287)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHT-T-----CEEEEEESSHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC-c-----CEEEEEECCHHHHHH
Confidence 37899999 899999999999999 8 789999999776543
No 480
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=92.39 E-value=0.11 Score=51.26 Aligned_cols=41 Identities=10% Similarity=-0.010 Sum_probs=36.0
Q ss_pred CCCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 41 ~~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
...++|.|+|+|.+|..++..|.+. | ++|++++.+++.++.
T Consensus 125 ~~~~hviI~G~g~~g~~la~~L~~~-~-----~~vvvid~~~~~~~~ 165 (565)
T 4gx0_A 125 DTRGHILIFGIDPITRTLIRKLESR-N-----HLFVVVTDNYDQALH 165 (565)
T ss_dssp TCCSCEEEESCCHHHHHHHHHTTTT-T-----CCEEEEESCHHHHHH
T ss_pred ccCCeEEEECCChHHHHHHHHHHHC-C-----CCEEEEECCHHHHHH
Confidence 3457899999999999999999988 7 899999999987654
No 481
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=92.35 E-value=0.13 Score=46.48 Aligned_cols=38 Identities=13% Similarity=0.264 Sum_probs=33.0
Q ss_pred ceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 44 ~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
+++.|.|+ |.+|.++|..|++. | ++|++.+|+++.+++
T Consensus 27 k~vlVTGas~gIG~aia~~L~~~-G-----~~V~~~~r~~~~~~~ 65 (297)
T 1xhl_A 27 KSVIITGSSNGIGRSAAVIFAKE-G-----AQVTITGRNEDRLEE 65 (297)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHH
Confidence 67888887 89999999999999 9 899999999876543
No 482
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=92.32 E-value=0.17 Score=45.73 Aligned_cols=35 Identities=23% Similarity=0.254 Sum_probs=31.9
Q ss_pred CceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 022050 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (303)
Q Consensus 43 ~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~ 83 (303)
.|+|.|.|+ |.+|..++..|++. | ++|++++|+..
T Consensus 20 ~~~vlVTGasG~iG~~l~~~L~~~-g-----~~V~~~~r~~~ 55 (330)
T 2pzm_A 20 HMRILITGGAGCLGSNLIEHWLPQ-G-----HEILVIDNFAT 55 (330)
T ss_dssp CCEEEEETTTSHHHHHHHHHHGGG-T-----CEEEEEECCSS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC-C-----CEEEEEECCCc
Confidence 489999998 99999999999999 8 89999999754
No 483
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=92.29 E-value=0.18 Score=45.37 Aligned_cols=38 Identities=21% Similarity=0.138 Sum_probs=33.2
Q ss_pred ceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 44 ~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
+++.|.|+ |.+|.++|..|++. | ++|++.+|+++.+++
T Consensus 35 k~vlVTGas~gIG~aia~~L~~~-G-----~~V~~~~r~~~~~~~ 73 (291)
T 3cxt_A 35 KIALVTGASYGIGFAIASAYAKA-G-----ATIVFNDINQELVDR 73 (291)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHT-T-----CEEEEEESSHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHH
Confidence 67999997 89999999999999 9 899999999865543
No 484
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=92.28 E-value=0.15 Score=45.94 Aligned_cols=36 Identities=19% Similarity=0.206 Sum_probs=32.9
Q ss_pred ceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchh
Q 022050 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSV 85 (303)
Q Consensus 44 ~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~ 85 (303)
|+|.|.|+ |.+|..++..|++. | ++|++++|+++..
T Consensus 4 ~~vlVtGatG~iG~~l~~~L~~~-G-----~~V~~~~r~~~~~ 40 (345)
T 2z1m_A 4 KRALITGIRGQDGAYLAKLLLEK-G-----YEVYGADRRSGEF 40 (345)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEECSCCSTT
T ss_pred CEEEEECCCChHHHHHHHHHHHC-C-----CEEEEEECCCccc
Confidence 78999998 99999999999999 8 8999999987653
No 485
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=92.27 E-value=0.083 Score=47.03 Aligned_cols=38 Identities=18% Similarity=0.146 Sum_probs=33.3
Q ss_pred ceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 44 ~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
+++.|.|+ |-+|.++|..|++. | .+|.+.+|+++.+++
T Consensus 27 k~~lVTGas~gIG~aia~~la~~-G-----~~V~~~~r~~~~~~~ 65 (271)
T 4ibo_A 27 RTALVTGSSRGLGRAMAEGLAVA-G-----ARILINGTDPSRVAQ 65 (271)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHT-T-----CEEEECCSCHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHH
Confidence 67888887 88999999999999 9 899999999876654
No 486
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=92.21 E-value=0.16 Score=45.31 Aligned_cols=35 Identities=23% Similarity=0.295 Sum_probs=31.7
Q ss_pred CceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 022050 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (303)
Q Consensus 43 ~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~ 83 (303)
+|||.|.|+ |.+|+.++..|.+. | ++|++++|++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~ 37 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKND-G-----NTPIILTRSIG 37 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhC-C-----CEEEEEeCCCC
Confidence 479999996 99999999999999 8 89999999844
No 487
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=92.20 E-value=0.16 Score=50.16 Aligned_cols=46 Identities=22% Similarity=0.258 Sum_probs=35.6
Q ss_pred HHHHhccCCCCCceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 022050 32 LRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (303)
Q Consensus 32 ~~~~~~~~~~~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~ 83 (303)
.+.++.........|.|||+|..|.+.|..+++. | .+|+++++.+.
T Consensus 115 ~~~~~~~~~~~~~DVvVVGaG~aGl~aA~~la~~-G-----~~V~vlEk~~~ 160 (571)
T 1y0p_A 115 RQAALASAPHDTVDVVVVGSGGAGFSAAISATDS-G-----AKVILIEKEPV 160 (571)
T ss_dssp HHHHHHSCCSEECSEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSSS
T ss_pred hhhhhccCCCCCCCEEEECCCHHHHHHHHHHHHC-C-----CcEEEEeCCCC
Confidence 3344433333346899999999999999999999 9 89999988753
No 488
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=92.19 E-value=0.5 Score=44.55 Aligned_cols=40 Identities=18% Similarity=0.214 Sum_probs=29.0
Q ss_pred CHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCC--CEEEEeecc
Q 022050 153 NLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITV--PVIISLAKG 199 (303)
Q Consensus 153 d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~--~iivs~~nG 199 (303)
+.+ .+.++|+||+|+|.....+..+++. .. + +.||++..-
T Consensus 58 ~~~-~~~~~Dvvf~a~~~~~s~~~~~~~~---~~---G~k~~VID~ss~ 99 (370)
T 3pzr_A 58 DIE-SLKQLDAVITCQGGSYTEKVYPALR---QA---GWKGYWIDAAST 99 (370)
T ss_dssp CHH-HHTTCSEEEECSCHHHHHHHHHHHH---HT---TCCCEEEECSST
T ss_pred Chh-HhccCCEEEECCChHHHHHHHHHHH---HC---CCCEEEEeCCch
Confidence 444 3679999999999988777777654 22 4 478887754
No 489
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=92.11 E-value=0.57 Score=44.30 Aligned_cols=41 Identities=17% Similarity=0.252 Sum_probs=29.4
Q ss_pred CHHHHhcCCCEEEEecCchhHHHHHHHHHHHhhccCCC--CEEEEeeccC
Q 022050 153 NLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITV--PVIISLAKGV 200 (303)
Q Consensus 153 d~~~a~~~aDlVIiaVp~~~~~~vl~~l~~~l~~~~~~--~iivs~~nGi 200 (303)
+.+ .+.++|+||+|+|.....+..+++.. . + +.||++..-+
T Consensus 62 ~~~-~~~~vDvvf~a~~~~~s~~~~~~~~~---~---G~k~~VID~ss~f 104 (377)
T 3uw3_A 62 SID-DLKKCDVIITCQGGDYTNDVFPKLRA---A---GWNGYWIDAASSL 104 (377)
T ss_dssp CHH-HHHTCSEEEECSCHHHHHHHHHHHHH---T---TCCSEEEECSSTT
T ss_pred Chh-HhcCCCEEEECCChHHHHHHHHHHHH---C---CCCEEEEeCCccc
Confidence 443 35789999999999888877776543 2 4 3788887543
No 490
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=92.09 E-value=0.22 Score=44.33 Aligned_cols=34 Identities=21% Similarity=0.304 Sum_probs=29.9
Q ss_pred CceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 022050 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (303)
Q Consensus 43 ~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~ 82 (303)
.+++.|.|+ |-+|.++|..|++. | .+|.+.+|++
T Consensus 31 gk~~lVTGas~GIG~aia~~la~~-G-----~~V~~~~r~~ 65 (273)
T 3uf0_A 31 GRTAVVTGAGSGIGRAIAHGYARA-G-----AHVLAWGRTD 65 (273)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESST
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC-C-----CEEEEEcCHH
Confidence 367889997 78999999999999 9 8999999764
No 491
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=92.08 E-value=0.16 Score=45.60 Aligned_cols=38 Identities=21% Similarity=0.184 Sum_probs=33.7
Q ss_pred CceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhh
Q 022050 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (303)
Q Consensus 43 ~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (303)
.|+|.|.|+ |.+|+.++..|++. | ++|++++|+++..+
T Consensus 11 ~~~vlVTGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~~~~ 49 (342)
T 1y1p_A 11 GSLVLVTGANGFVASHVVEQLLEH-G-----YKVRGTARSASKLA 49 (342)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESSHHHHH
T ss_pred CCEEEEECCccHHHHHHHHHHHHC-C-----CEEEEEeCCcccHH
Confidence 379999998 99999999999999 8 89999999876543
No 492
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=92.05 E-value=0.16 Score=44.47 Aligned_cols=39 Identities=18% Similarity=0.085 Sum_probs=34.0
Q ss_pred CceEEEECC-C-hHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 43 PLRIVGVGA-G-AWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 43 ~~kI~VIGa-G-~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
.+++.|.|+ | -+|.++|..|++. | ++|++.+|+++.++.
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~~~-G-----~~V~~~~r~~~~~~~ 62 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALLE-G-----ADVVISDYHERRLGE 62 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHHT-T-----CEEEEEESCHHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHC-C-----CEEEEecCCHHHHHH
Confidence 468999999 8 4999999999999 9 899999999876554
No 493
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=92.03 E-value=0.22 Score=44.91 Aligned_cols=38 Identities=21% Similarity=0.126 Sum_probs=31.8
Q ss_pred ceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 44 ~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
+.+.|-|+ +-+|.++|..|++. | .+|.+.+|+++.+++
T Consensus 30 KvalVTGas~GIG~aiA~~la~~-G-----a~V~i~~r~~~~l~~ 68 (273)
T 4fgs_A 30 KIAVITGATSGIGLAAAKRFVAE-G-----ARVFITGRRKDVLDA 68 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHHH
T ss_pred CEEEEeCcCCHHHHHHHHHHHHC-C-----CEEEEEECCHHHHHH
Confidence 45566677 67999999999999 9 899999999887654
No 494
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=91.96 E-value=0.22 Score=42.73 Aligned_cols=39 Identities=18% Similarity=0.196 Sum_probs=33.8
Q ss_pred CceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhhh
Q 022050 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (303)
Q Consensus 43 ~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (303)
++++.|.|+ |.+|.++|..|++. | ++|.+.+|+++.+++
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~-G-----~~V~~~~r~~~~~~~ 41 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARD-G-----YALALGARSVDRLEK 41 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHH
Confidence 367889997 78999999999999 9 899999999876654
No 495
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=91.96 E-value=0.18 Score=46.29 Aligned_cols=38 Identities=16% Similarity=0.230 Sum_probs=31.7
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCCchhh
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (303)
-.+|.|+|+|.+|.+.+..+... | .+|+..++++++.+
T Consensus 177 g~~VlV~GaG~vG~~a~qla~~~-G-----a~Vi~~~~~~~~~~ 214 (348)
T 3two_A 177 GTKVGVAGFGGLGSMAVKYAVAM-G-----AEVSVFARNEHKKQ 214 (348)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHT-T-----CEEEEECSSSTTHH
T ss_pred CCEEEEECCcHHHHHHHHHHHHC-C-----CeEEEEeCCHHHHH
Confidence 37899999999999977777666 8 78999999987665
No 496
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=91.94 E-value=0.16 Score=48.00 Aligned_cols=35 Identities=17% Similarity=0.179 Sum_probs=31.6
Q ss_pred ceEEEECCChHHHHHHHHHHH--hcCCCCCCeeEEEEecCCch
Q 022050 44 LRIVGVGAGAWGSVFTAMLQD--SYGYLRDKVLIRIWRRPGRS 84 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~--~~G~~~~~~~V~l~~r~~~~ 84 (303)
++|+|||+|..|.+.|..|++ . | ++|+++++++..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~-g-----~~Vtlie~~~~~ 39 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMP-D-----LKITLISDRPYF 39 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCT-T-----CEEEEECSSSEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCC-C-----CeEEEECCCCCC
Confidence 689999999999999999999 5 6 899999998753
No 497
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=91.93 E-value=0.14 Score=45.44 Aligned_cols=33 Identities=15% Similarity=0.182 Sum_probs=30.2
Q ss_pred CceEEEECCChHHHHHHHHHHHhcCCCCCCe-eEEEEecC
Q 022050 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRP 81 (303)
Q Consensus 43 ~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~-~V~l~~r~ 81 (303)
+++|+|||+|.-|.+.|..|++. | + +|++++++
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~-g-----~~~v~lie~~ 34 (311)
T 2q0l_A 1 MIDCAIIGGGPAGLSAGLYATRG-G-----VKNAVLFEKG 34 (311)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-T-----CSSEEEECSS
T ss_pred CceEEEECccHHHHHHHHHHHHC-C-----CCcEEEEcCC
Confidence 36899999999999999999998 8 8 99999985
No 498
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=91.93 E-value=0.18 Score=45.61 Aligned_cols=35 Identities=17% Similarity=0.157 Sum_probs=31.8
Q ss_pred CceEEEECC-ChHHHHHHHHHHHhcCCCCCCeeEEEEecCCc
Q 022050 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (303)
Q Consensus 43 ~~kI~VIGa-G~mG~aiA~~La~~~G~~~~~~~V~l~~r~~~ 83 (303)
+|+|.|.|+ |.+|..++..|++. | ++|++++|++.
T Consensus 21 ~~~vlVTGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~ 56 (333)
T 2q1w_A 21 MKKVFITGICGQIGSHIAELLLER-G-----DKVVGIDNFAT 56 (333)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEECCSS
T ss_pred CCEEEEeCCccHHHHHHHHHHHHC-C-----CEEEEEECCCc
Confidence 589999996 99999999999998 8 89999999764
No 499
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=91.91 E-value=0.1 Score=50.77 Aligned_cols=33 Identities=18% Similarity=0.409 Sum_probs=31.0
Q ss_pred ceEEEECCChHHHHHHHHHHHhcCCCCCCeeEEEEecCC
Q 022050 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (303)
Q Consensus 44 ~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~V~l~~r~~ 82 (303)
.+|+|||+|..|.+.|..|++. | ++|+++++.+
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~-G-----~~V~liE~~~ 40 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMR-G-----HRVLLLEREA 40 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTT-T-----CCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHhC-C-----CCEEEEccCC
Confidence 6899999999999999999998 8 8999999886
No 500
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=91.83 E-value=0.16 Score=47.77 Aligned_cols=36 Identities=25% Similarity=0.325 Sum_probs=31.3
Q ss_pred CCceEEEECCChHHHHHHHHHHHhcCCCCCCee--EEEEecCCc
Q 022050 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVL--IRIWRRPGR 83 (303)
Q Consensus 42 ~~~kI~VIGaG~mG~aiA~~La~~~G~~~~~~~--V~l~~r~~~ 83 (303)
.+++|+|||+|.-|.+.|..|++. | ++ |+++++.+.
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~-g-----~~~~V~lie~~~~ 45 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQN-G-----FEGRVLVIGREPE 45 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-T-----CCSCEEEEESSSS
T ss_pred CCCcEEEECChHHHHHHHHHHHcc-C-----cCCCEEEEecCCC
Confidence 347899999999999999999998 8 55 999998763
Done!