Query 022053
Match_columns 303
No_of_seqs 329 out of 2390
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 13:16:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022053.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022053hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2pny_A Isopentenyl-diphosphate 100.0 1.3E-50 4.6E-55 371.4 24.2 223 68-302 18-246 (246)
2 2dho_A Isopentenyl-diphosphate 100.0 1.2E-49 4E-54 362.6 21.7 228 69-302 8-235 (235)
3 1hzt_A Isopentenyl diphosphate 100.0 1.7E-31 6E-36 232.2 15.6 171 86-279 1-171 (190)
4 3dup_A MUTT/nudix family prote 100.0 8.7E-31 3E-35 246.5 18.9 170 87-280 88-263 (300)
5 2fkb_A Putative nudix hydrolas 100.0 1.4E-27 4.7E-32 204.8 19.9 165 82-280 3-167 (180)
6 1q27_A Putative nudix hydrolas 99.9 4.8E-25 1.7E-29 187.4 16.4 142 88-257 6-152 (171)
7 3grn_A MUTT related protein; s 99.8 2E-19 6.7E-24 150.0 17.6 129 119-279 5-135 (153)
8 1sjy_A MUTT/nudix family prote 99.8 1.1E-18 3.6E-23 145.5 19.2 121 118-257 9-134 (159)
9 3oga_A Nucleoside triphosphata 99.8 3.8E-19 1.3E-23 150.0 14.0 137 118-276 23-161 (165)
10 3i7u_A AP4A hydrolase; nudix p 99.8 7.3E-19 2.5E-23 145.4 15.1 124 121-279 3-127 (134)
11 3r03_A Nudix hydrolase; struct 99.8 7.2E-19 2.5E-23 144.2 12.9 128 119-277 5-132 (144)
12 3gwy_A Putative CTP pyrophosph 99.8 3.2E-18 1.1E-22 140.6 14.0 123 122-277 6-129 (140)
13 3hhj_A Mutator MUTT protein; n 99.8 3.1E-18 1.1E-22 143.4 13.4 129 119-278 26-154 (158)
14 1rya_A GDP-mannose mannosyl hy 99.8 7E-18 2.4E-22 140.6 15.4 131 121-276 17-151 (160)
15 2pbt_A AP4A hydrolase; nudix p 99.8 7.8E-18 2.7E-22 136.1 15.1 122 122-278 4-126 (134)
16 1ktg_A Diadenosine tetraphosph 99.8 1.9E-17 6.5E-22 134.7 16.8 113 121-254 2-119 (138)
17 2o1c_A DATP pyrophosphohydrola 99.8 1.2E-17 4.3E-22 136.9 15.8 128 122-278 9-146 (150)
18 3exq_A Nudix family hydrolase; 99.8 3.8E-18 1.3E-22 144.1 12.8 129 118-279 6-136 (161)
19 1vcd_A NDX1; nudix protein, di 99.8 1.9E-17 6.7E-22 132.7 16.3 118 123-278 3-121 (126)
20 3eds_A MUTT/nudix family prote 99.8 9.2E-19 3.2E-23 146.6 8.6 119 115-256 14-138 (153)
21 2azw_A MUTT/nudix family prote 99.8 1.8E-17 6.2E-22 136.1 15.2 126 119-278 15-144 (148)
22 2rrk_A ORF135, CTP pyrophospho 99.8 1.2E-17 4.1E-22 136.0 13.7 126 121-279 7-132 (140)
23 2b0v_A Nudix hydrolase; struct 99.8 1.7E-17 5.9E-22 137.2 14.8 128 122-278 8-137 (153)
24 3u53_A BIS(5'-nucleosyl)-tetra 99.8 1.8E-17 6.3E-22 138.9 15.1 112 123-255 4-127 (155)
25 3shd_A Phosphatase NUDJ; nudix 99.7 3.2E-17 1.1E-21 136.1 16.0 126 122-279 5-132 (153)
26 1v8y_A ADP-ribose pyrophosphat 99.7 2.1E-17 7.1E-22 140.6 13.5 116 119-257 30-148 (170)
27 1f3y_A Diadenosine 5',5'''-P1, 99.7 1.3E-17 4.5E-22 139.1 11.9 118 118-255 10-147 (165)
28 4dyw_A MUTT/nudix family prote 99.7 2.4E-17 8.2E-22 138.7 13.4 127 118-277 25-153 (157)
29 3ees_A Probable pyrophosphohyd 99.7 2.3E-17 8E-22 136.0 13.0 124 122-278 21-144 (153)
30 3fcm_A Hydrolase, nudix family 99.7 3.4E-17 1.2E-21 143.0 13.9 135 118-281 41-184 (197)
31 2yvp_A NDX2, MUTT/nudix family 99.7 4.3E-17 1.5E-21 139.9 13.5 114 123-257 42-158 (182)
32 2w4e_A MUTT/nudix family prote 99.7 4E-17 1.4E-21 135.6 12.4 114 123-257 6-121 (145)
33 2b06_A MUTT/nudix family prote 99.7 4.1E-17 1.4E-21 135.7 12.2 125 119-278 5-133 (155)
34 3son_A Hypothetical nudix hydr 99.7 5.5E-17 1.9E-21 134.3 12.8 122 124-278 7-138 (149)
35 3e57_A Uncharacterized protein 99.7 4.4E-17 1.5E-21 146.1 12.2 144 111-275 56-201 (211)
36 3f6a_A Hydrolase, nudix family 99.7 9.5E-17 3.2E-21 134.7 12.6 129 120-278 4-148 (159)
37 3q93_A 7,8-dihydro-8-oxoguanin 99.7 9.7E-17 3.3E-21 138.1 12.5 125 121-278 23-148 (176)
38 3gg6_A Nudix motif 18, nucleos 99.7 1.2E-17 4.1E-22 139.3 6.4 111 119-254 17-131 (156)
39 2kdv_A RNA pyrophosphohydrolas 99.7 1.8E-16 6E-21 134.9 13.5 115 119-253 5-135 (164)
40 1nqz_A COA pyrophosphatase (MU 99.7 8.3E-17 2.8E-21 139.6 10.2 114 119-253 32-151 (194)
41 3i9x_A MUTT/nudix family prote 99.7 9.4E-17 3.2E-21 138.9 9.4 138 119-285 24-176 (187)
42 3id9_A MUTT/nudix family prote 99.7 2E-16 6.7E-21 134.1 10.8 123 119-277 20-148 (171)
43 1mut_A MUTT, nucleoside tripho 99.7 1.5E-17 5.1E-22 133.4 3.3 123 121-277 4-126 (129)
44 2yyh_A MUTT domain, 8-OXO-DGTP 99.7 8.3E-16 2.8E-20 125.7 13.2 108 121-251 8-119 (139)
45 2jvb_A Protein PSU1, mRNA-deca 99.7 4.1E-16 1.4E-20 128.4 11.3 108 123-256 5-117 (146)
46 2pqv_A MUTT/nudix family prote 99.7 2.1E-16 7.2E-21 131.5 9.5 111 119-253 16-129 (154)
47 1x51_A A/G-specific adenine DN 99.7 6.4E-16 2.2E-20 129.0 11.6 114 133-279 33-148 (155)
48 3h95_A Nucleoside diphosphate- 99.6 4E-15 1.4E-19 130.2 16.4 111 122-254 26-141 (199)
49 3fk9_A Mutator MUTT protein; s 99.6 6.7E-16 2.3E-20 134.4 11.3 124 122-278 4-128 (188)
50 1mk1_A ADPR pyrophosphatase; n 99.6 1.2E-15 4.2E-20 134.5 11.6 114 123-257 44-162 (207)
51 3cng_A Nudix hydrolase; struct 99.6 3.4E-15 1.2E-19 129.6 14.0 123 121-279 39-162 (189)
52 1g0s_A Hypothetical 23.7 kDa p 99.6 4.5E-15 1.6E-19 131.5 15.1 116 122-257 57-183 (209)
53 3q1p_A Phosphohydrolase (MUTT/ 99.6 4.8E-16 1.6E-20 137.1 8.6 111 121-253 67-178 (205)
54 1k2e_A Nudix homolog; nudix/MU 99.6 8E-16 2.7E-20 129.0 9.3 122 123-280 2-135 (156)
55 2fvv_A Diphosphoinositol polyp 99.6 2.2E-15 7.5E-20 132.3 11.7 112 119-256 38-153 (194)
56 3o6z_A GDP-mannose pyrophospha 99.6 6.7E-15 2.3E-19 128.4 14.8 115 121-257 44-170 (191)
57 2qjt_B Nicotinamide-nucleotide 99.6 8.3E-15 2.8E-19 137.9 15.9 137 119-279 205-346 (352)
58 3o8s_A Nudix hydrolase, ADP-ri 99.6 8.8E-16 3E-20 135.5 8.4 123 121-277 69-192 (206)
59 3f13_A Putative nudix hydrolas 99.6 5.9E-15 2E-19 126.1 13.2 115 121-279 15-129 (163)
60 1vk6_A NADH pyrophosphatase; 1 99.6 2.2E-15 7.4E-20 139.5 11.3 106 122-253 140-246 (269)
61 2fb1_A Conserved hypothetical 99.6 1.2E-15 4E-20 137.1 8.8 114 119-252 10-127 (226)
62 2qjo_A Bifunctional NMN adenyl 99.6 4.7E-15 1.6E-19 138.6 13.2 135 119-278 200-338 (341)
63 1vhz_A ADP compounds hydrolase 99.6 8.3E-15 2.8E-19 128.8 12.8 113 123-257 50-164 (198)
64 3gz5_A MUTT/nudix family prote 99.6 5.5E-15 1.9E-19 134.0 11.5 136 121-287 21-162 (240)
65 3q91_A Uridine diphosphate glu 99.6 5.8E-15 2E-19 132.6 11.3 137 90-257 17-192 (218)
66 2dsc_A ADP-sugar pyrophosphata 99.5 4E-14 1.4E-18 125.2 9.9 114 122-256 61-186 (212)
67 3fjy_A Probable MUTT1 protein; 99.5 1.1E-13 3.8E-18 131.9 13.7 119 131-280 35-174 (364)
68 2fml_A MUTT/nudix family prote 99.5 9.1E-14 3.1E-18 128.2 10.9 150 121-288 38-204 (273)
69 3fsp_A A/G-specific adenine gl 99.5 1.8E-13 6.3E-18 131.3 12.3 120 121-277 239-358 (369)
70 2a6t_A SPAC19A8.12; alpha/beta 99.5 8E-14 2.8E-18 128.8 8.7 109 123-256 102-215 (271)
71 1u20_A U8 snoRNA-binding prote 99.4 2.4E-14 8.3E-19 127.1 3.7 102 129-252 51-164 (212)
72 3qsj_A Nudix hydrolase; struct 99.4 2.7E-12 9.2E-17 116.4 16.3 147 121-278 8-208 (232)
73 1q33_A Pyrophosphatase, ADP-ri 99.2 7.1E-11 2.4E-15 110.1 11.8 118 135-280 140-276 (292)
74 2xsq_A U8 snoRNA-decapping enz 99.2 2.8E-11 9.7E-16 108.3 6.0 95 134-251 65-171 (217)
75 3kvh_A Protein syndesmos; NUDT 98.6 4.1E-08 1.4E-12 86.8 5.8 103 121-250 20-146 (214)
76 3rh7_A Hypothetical oxidoreduc 98.5 5.1E-07 1.7E-11 85.3 11.0 108 123-279 184-292 (321)
77 3bho_A Cleavage and polyadenyl 98.4 6.2E-07 2.1E-11 79.7 7.1 58 117-190 54-113 (208)
78 3k6e_A CBS domain protein; str 35.7 24 0.00083 28.2 3.1 30 80-109 107-136 (156)
79 3ctu_A CBS domain protein; str 32.9 35 0.0012 26.5 3.5 25 85-109 112-136 (156)
80 3lqn_A CBS domain protein; csg 28.6 37 0.0013 26.1 3.0 32 78-109 106-137 (150)
81 1zxu_A AT5G01750 protein; PFAM 28.6 66 0.0023 27.5 4.8 55 88-155 51-105 (217)
82 1yav_A Hypothetical protein BS 27.7 39 0.0013 26.4 3.0 33 77-109 104-136 (159)
83 3zv0_C H/ACA ribonucleoprotein 25.9 1.1E+02 0.0036 26.5 5.5 51 88-154 109-161 (195)
84 3gby_A Uncharacterized protein 25.8 35 0.0012 25.6 2.2 20 90-109 101-120 (128)
85 2emq_A Hypothetical conserved 24.6 46 0.0016 25.7 2.8 32 78-109 102-133 (157)
86 3nqr_A Magnesium and cobalt ef 23.8 40 0.0014 25.3 2.3 20 90-109 101-120 (127)
87 3kpb_A Uncharacterized protein 23.3 43 0.0015 24.6 2.3 21 89-109 94-114 (122)
88 3i8n_A Uncharacterized protein 23.0 42 0.0015 25.3 2.3 20 90-109 104-123 (130)
89 3lfr_A Putative metal ION tran 22.2 42 0.0014 25.6 2.1 20 90-109 102-121 (136)
90 4esy_A CBS domain containing m 21.9 56 0.0019 25.9 2.9 20 90-109 51-70 (170)
91 2ef7_A Hypothetical protein ST 21.6 46 0.0016 24.9 2.2 20 90-109 100-119 (133)
92 3sl7_A CBS domain-containing p 21.5 48 0.0016 26.1 2.4 20 90-109 131-150 (180)
93 3jtf_A Magnesium and cobalt ef 21.3 44 0.0015 25.2 2.0 20 90-109 101-120 (129)
94 4gqw_A CBS domain-containing p 21.3 49 0.0017 25.1 2.3 20 90-109 118-137 (152)
95 2nyc_A Nuclear protein SNF4; b 21.1 49 0.0017 24.9 2.3 20 90-109 116-135 (144)
96 3hf7_A Uncharacterized CBS-dom 20.5 48 0.0016 25.1 2.1 20 90-109 102-121 (130)
97 3oi8_A Uncharacterized protein 20.3 48 0.0016 26.0 2.1 19 90-108 135-153 (156)
98 2rih_A Conserved protein with 20.1 51 0.0018 25.0 2.2 20 90-109 103-122 (141)
No 1
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=100.00 E-value=1.3e-50 Score=371.43 Aligned_cols=223 Identities=44% Similarity=0.790 Sum_probs=198.7
Q ss_pred ccCCcccccCCCHHHHHhhhcCeEEEEcCCCcEEeeeeccccchhhhhccCCceeEEEEEEEEeCCCeEEEEEecCCCCc
Q 022053 68 TMGDATTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVT 147 (303)
Q Consensus 68 ~~~~~~~~~~~d~~q~~lm~eE~~~vvDe~d~~iG~~tr~~~H~~~~i~~~gl~Hravsv~I~n~~g~lLLqqRs~~K~~ 147 (303)
..|++..+++||+.|+++| +|.|++||++|+++|.++|+.||+++++. .|++|++|+|+|+|.+|+||||||+..|.+
T Consensus 18 ~~~~~~~~~~~~~~q~~~~-~E~~~lvd~~~~~iG~~~r~~~h~~~~~~-~g~~h~av~v~v~~~~g~lLLqrRs~~K~~ 95 (246)
T 2pny_A 18 GSMSDINLDWVDRRQLQRL-EEMLIVVDENDKVIGADTKRNCHLNENIE-KGLLHRAFSVVLFNTKNRILIQQRSDTKVT 95 (246)
T ss_dssp SCGGGGCCTTSCHHHHHHT-TCEEEEECTTCCEEEEEEHHHHTBHHHHT-TTCCEEEEEEEEECTTCCEEEEEECTTCSS
T ss_pred ccccccccccCCHHHHhhc-cceEEEEcCCCCEEEEEEhHHhccccccC-CCcEEEEEEEEEEeCCCEEEEEEecCCCCC
Confidence 4567778999999999988 57999999999999999999999887765 699999999999999999999999999999
Q ss_pred CCCceecccCccCCCC------CChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCceeeeEEEEEEcCCCCCCcceEEE
Q 022053 148 FPLVWTNTCCSHPLYR------ESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELD 221 (303)
Q Consensus 148 ~PG~W~~p~gGhve~g------Es~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~l~~l~~i~y~~~~~~~~~ehei~ 221 (303)
|||+|++|||||+++| |+ .+|+++||+|||+|||||++..++++++.+++++.|..+.+++|++++++
T Consensus 96 ~pG~W~~p~gG~v~~G~~E~~~Et------~~~~~eAA~REl~EElGi~~~~v~~~~l~~l~~~~y~~~~~~~~~~~e~~ 169 (246)
T 2pny_A 96 FPGYFTDSCSSHPLYNPAELEEKD------AIGVRRAAQRRLQAELGIPGEQISPEDIVFMTIYHHKAKSDRIWGEHEIC 169 (246)
T ss_dssp STTCBCCSEEECCBSSHHHHCCGG------GHHHHHHHHHHHHHHHCCCTTTCCGGGSEEEEEEEEEEESSSSBEEEEEE
T ss_pred CCCceEeccCceeccCCccccccc------chhHHHHHHHHHHHHHCCCccccCccccEEEEEEEEEecCCCceeeeEEE
Confidence 9999999999999999 55 22348999999999999998755555678999999988777788889999
Q ss_pred EEEEEEecCcCCCCccccccEEEEcHHHHHHHHHhccCCCCCcccCHHHHHHHHHHHHHHHHHhcccccccccCCCceee
Q 022053 222 YLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHK 301 (303)
Q Consensus 222 ~vf~~~~d~~i~~~~~EV~~~~Wvs~eEL~~ll~~~~~~~~~~~ftPw~~~i~~~~l~~ww~~~~~~~l~~~~~~~~i~~ 301 (303)
|+|++..+..+.++++|+.+++|++++||.+++...+. .+..|+|||+.++++||++||+++++ |+++.|+++|||
T Consensus 170 ~vf~~~~~~~~~~~~~Ev~~~~wv~~eel~~~l~~~~~--~~~~ftp~~~~i~~~~l~~ww~~~~~--~~~~~~~~~~~~ 245 (246)
T 2pny_A 170 YLLLVRKNVTLNPDPSETKSILYLSQEELWELLEREAR--GEVKVTPWLRTIAERFLYRWWPHLDD--VTPFVELHKIHR 245 (246)
T ss_dssp EEEEEECCCCCCCCTTTEEEEEEECHHHHHHHHHHHHH--TSSCBCHHHHHHHHHTHHHHGGGTTC--CGGGCCSSCCEE
T ss_pred EEEEEEECCCCCCChHHeeEEEEEeHHHHHHHHHhccC--CCceECHhHHHHHHHHHHHHHHhhhh--hhhccCccceee
Confidence 99998877778888999999999999999999987321 13589999999999999999999997 999999999999
Q ss_pred c
Q 022053 302 L 302 (303)
Q Consensus 302 ~ 302 (303)
|
T Consensus 246 ~ 246 (246)
T 2pny_A 246 V 246 (246)
T ss_dssp C
T ss_pred C
Confidence 7
No 2
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=100.00 E-value=1.2e-49 Score=362.64 Aligned_cols=228 Identities=54% Similarity=0.947 Sum_probs=187.8
Q ss_pred cCCcccccCCCHHHHHhhhcCeEEEEcCCCcEEeeeeccccchhhhhccCCceeEEEEEEEEeCCCeEEEEEecCCCCcC
Q 022053 69 MGDATTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTF 148 (303)
Q Consensus 69 ~~~~~~~~~~d~~q~~lm~eE~~~vvDe~d~~iG~~tr~~~H~~~~i~~~gl~Hravsv~I~n~~g~lLLqqRs~~K~~~ 148 (303)
.|.+..++++|+.|+++| +|.|+|||++|+++|..+|+.||+++++. .|++|++|+|+|+|.+|+||||||+..|.+|
T Consensus 8 ~~~~~~~~~~~~~q~~~~-~E~~~lvd~~~~~~G~~~r~~~h~~~~~~-~g~~h~av~v~v~~~~g~lLLq~R~~~k~~~ 85 (235)
T 2dho_A 8 HMPEINTNHLDKQQVQLL-AEMCILIDENDNKIGAETKKNCHLNENIE-KGLLHRAFSVFLFNTENKLLLQQRSDAKITF 85 (235)
T ss_dssp -------------CCCSS-CCEEEEECTTCCEEEEEEHHHHTBHHHHT-TTCCEEEEEEEEECTTCCEEEEEECTTCSSS
T ss_pred cCCcccccccChhHHhhc-CcEEEEEcCCCCEEEEEEhHHhccccccC-CCceEEEEEEEEEcCCCEEEEEEecCcCCCC
Confidence 466788999999999988 57999999999999999999999887665 5999999999999999999999999999999
Q ss_pred CCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCceeeeEEEEEEcCCCCCCcceEEEEEEEEEe
Q 022053 149 PLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVR 228 (303)
Q Consensus 149 PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~l~~l~~i~y~~~~~~~~~ehei~~vf~~~~ 228 (303)
||+|++|||||+++||+++.++..+|+++||+|||+|||||.+..++++++.+++++.|..+.+++|++++++|+|++..
T Consensus 86 pg~W~~p~gG~v~~Ge~E~~~E~~~~~~~Aa~REl~EElGi~~~~v~~~~l~~l~~~~y~~~~~~~~~~~e~~~vf~~~~ 165 (235)
T 2dho_A 86 PGCFTNTCCSHPLSNPAELEESDALGVRRAAQRRLKAELGIPLEEVPPEEINYLTRIHYKAQSDGIWGEHEIDYILLVRM 165 (235)
T ss_dssp TTCEESSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCGGGSCGGGSEEEEEEEEEEECSSSBEEEEEEEEEEEEC
T ss_pred CCcEEeccCceecCCCcccccccchhHHHHHHHHHHHHHCCCccccChhhcEEEEEEEEeccCCCccceeEEEEEEEEEE
Confidence 99999999999999943211112233589999999999999987554556789999999887777888899999999887
Q ss_pred cCcCCCCccccccEEEEcHHHHHHHHHhccCCCCCcccCHHHHHHHHHHHHHHHHHhcccccccccCCCceeec
Q 022053 229 DVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 302 (303)
Q Consensus 229 d~~i~~~~~EV~~~~Wvs~eEL~~ll~~~~~~~~~~~ftPw~~~i~~~~l~~ww~~~~~~~l~~~~~~~~i~~~ 302 (303)
+..+.++++|+.+++|++++||.+++...+. .+..|+|||+.++++||++||+++++ |+++.|+++||||
T Consensus 166 ~~~~~~~~~Ev~~~~wv~~~el~~~l~~~~~--~~~~ftp~~~~i~~~~L~~ww~~~~~--~~~~~~~~~~~~~ 235 (235)
T 2dho_A 166 NVTLNPDPNEIKSYCYVSKEELKELLKKAAS--GEIKITPWFKIIAATFLFKWWDNLNH--LNQFVDHEKIYRM 235 (235)
T ss_dssp CCCCCCCTTTEEEEEEECHHHHHHHHHHHHT--TSSCBCHHHHHHHHHTHHHHHTTTTC--CGGGCCSSCEEEC
T ss_pred CCCCcCChHHEEEEEEEcHHHHHHHHhhccC--CCcEECHhHHHHHHHHHHHHHhhcch--hhhccCccceeeC
Confidence 7778888999999999999999999987321 13589999999999999999999997 9999999999997
No 3
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.97 E-value=1.7e-31 Score=232.20 Aligned_cols=171 Identities=28% Similarity=0.415 Sum_probs=115.8
Q ss_pred hhcCeEEEEcCCCcEEeeeeccccchhhhhccCCceeEEEEEEEEeCCCeEEEEEecCCCCcCCCceecccCccCCCCCC
Q 022053 86 MFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRES 165 (303)
Q Consensus 86 m~eE~~~vvDe~d~~iG~~tr~~~H~~~~i~~~gl~Hravsv~I~n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs 165 (303)
|++|+|++||++|+++|..+|..||. ..|.+|++++++|++.+|++||+||+..+..+||.|++|+||++++||+
T Consensus 1 ~~~E~~~v~d~~~~~~g~~~r~~~~~-----~~~~~~~~v~~~i~~~~g~vLl~~R~~~~~~~~g~w~~~PgG~ve~gEt 75 (190)
T 1hzt_A 1 MQTEHVILLNAQGVPTGTLEKYAAHT-----ADTRLHLAFSSWLFNAKGQLLVTRRALSKKAWPGVWTNSVCGHPQLGES 75 (190)
T ss_dssp -----------------------------------CEECEEEEEECTTCCEEEEEECTTCSSSTTCEEESEEECCCTTCC
T ss_pred CCceEEEEECCCCCEeeeEEHhhhcc-----cCCceEEEEEEEEEcCCCEEEEEEeCCCCCCCCCcccCcccccCCCCCC
Confidence 66789999999999999999999994 3688999999999998899999999988888999999955999999999
Q ss_pred hhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCceeeeEEEEEEcCCCCCCcceEEEEEEEEEecCcCCCCccccccEEEE
Q 022053 166 ELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYV 245 (303)
Q Consensus 166 ~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~l~~l~~i~y~~~~~~~~~ehei~~vf~~~~d~~i~~~~~EV~~~~Wv 245 (303)
+++||+||++||||+.+..+. .+++.+.|.....++...+.+.++|.+..+..+.++++|+.+++|+
T Consensus 76 ---------~~~aa~REl~EEtGl~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~E~~~~~W~ 142 (190)
T 1hzt_A 76 ---------NEDAVIRRCRYELGVEITPPE----SIYPDFRYRATDPSGIVENEVCPVFAARTTSALQINDDEVMDYQWC 142 (190)
T ss_dssp ---------HHHHHHHHHHHHHCCCBSCCE----EEETTCEEEEECTTSCEEEEECCEEEEEBCSCCCCCTTTEEEEEEE
T ss_pred ---------HHHHHHHHHHHHHCCCchhhh----eeeeeEEEEeeCCCCCcceEEEEEEEEecCCCCcCCccceeeEEEe
Confidence 899999999999999986320 3444455543333333346677788887666677778899999999
Q ss_pred cHHHHHHHHHhccCCCCCcccCHHHHHHHHHHHH
Q 022053 246 NREQLKELLRKADAGEEGLKLSPWFRLVVDNFLF 279 (303)
Q Consensus 246 s~eEL~~ll~~~~~~~~~~~ftPw~~~i~~~~l~ 279 (303)
+++++.+++..+ +..|+||++.+++.|+.
T Consensus 143 ~~~el~~~~~~~-----~~~~~p~~~~~~~~~~~ 171 (190)
T 1hzt_A 143 DLADVLHGIDAT-----PWAFSPWMVMQATNREA 171 (190)
T ss_dssp CHHHHHHHHHHC-----GGGBCHHHHHHHHSHHH
T ss_pred cHHHHHHHHHcC-----hhhcCchHHHHHHHHHH
Confidence 999999999874 46899999999998875
No 4
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=99.97 E-value=8.7e-31 Score=246.51 Aligned_cols=170 Identities=13% Similarity=0.076 Sum_probs=147.1
Q ss_pred hcCeEEEEcCCC-cEEeeeeccccchhhhhccCCceeEEEEEEEEeCCC---eEEEEEecCCCCcCCCceecccCccCCC
Q 022053 87 FEDECILVDEND-RVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKY---ELLLQQRSGTKVTFPLVWTNTCCSHPLY 162 (303)
Q Consensus 87 ~eE~~~vvDe~d-~~iG~~tr~~~H~~~~i~~~gl~Hravsv~I~n~~g---~lLLqqRs~~K~~~PG~W~~p~gGhve~ 162 (303)
++|.++|||++| +++|..+|..+|+ .|++|++|++.+++.++ +||||||+..|.+|||+|+++||||+++
T Consensus 88 r~E~~~V~~~~~~~~~~~~eR~~~~~------~G~~~~~vh~~~~~~~~~~~~lll~rRs~~K~~~PG~wd~svaG~i~~ 161 (300)
T 3dup_A 88 RGELYRVNQSWGEPTLMLLDRAVVPT------FGVRAYGVHLNGYVGAGADLHLWIGRRSPDKSVAPGKLDNMVAGGQPA 161 (300)
T ss_dssp CSCEEEECSSTTSCCCEEEEGGGTGG------GTCCEEEEEEEEEESCGGGCEEEEEEECTTCSSSTTCEEESEEEECCT
T ss_pred ccccEEeecCCCCeeeEEEEhhhccc------cceEEEEEEEEEEEecCCeeEEEEEeCCCcccCCCCccccccccCCCC
Confidence 578999999986 8999999999995 69999999999999887 9999999999999999999999999999
Q ss_pred CCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCceeeeEEEEEEcCCCCCCcceEEEEEEEEEec--CcCCCCccccc
Q 022053 163 RESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRD--VSVNPNPDEVA 240 (303)
Q Consensus 163 gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~l~~l~~i~y~~~~~~~~~ehei~~vf~~~~d--~~i~~~~~EV~ 240 (303)
||+ +++||+||+.||+||+...+ ..+.+++.+.|......++ ++++.|+|.+..+ ..+.++++||+
T Consensus 162 GEs---------~~eaA~REl~EElGI~~~~~--~~l~~~g~i~y~~~~~~G~-~~E~~~vy~~~l~~~~~p~~~~~EV~ 229 (300)
T 3dup_A 162 DLS---------LRQNLIKECAEEADLPEALA--RQAIPVGAITYCMESPAGI-KPDTLFLYDLALPEDFRPHNTDGEMA 229 (300)
T ss_dssp TSC---------HHHHHHHHHHHHHCCCHHHH--TTCEEEEEEEEEEEETTEE-EEEEEEEEEEECCTTCCCCCTTSSEE
T ss_pred CCC---------HHHHHHHHHHHHhCCChhhh--hhccccceEEEEEecCCCe-EEEEEEEEEEEecCCCcCCCCchHhh
Confidence 999 89999999999999997643 2456777777766544443 5888888877754 45578899999
Q ss_pred cEEEEcHHHHHHHHHhccCCCCCcccCHHHHHHHHHHHHH
Q 022053 241 EYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFK 280 (303)
Q Consensus 241 ~~~Wvs~eEL~~ll~~~~~~~~~~~ftPw~~~i~~~~l~~ 280 (303)
+++|++++|+.+++.+ + ..|+||+.+++-+||.+
T Consensus 230 ~~~~v~~~El~~~l~~-p-----g~F~p~~~lV~ldfl~R 263 (300)
T 3dup_A 230 DFMLWPAAKVVEAVRT-T-----EAFKFNVNLTVIDFAIR 263 (300)
T ss_dssp EEEEEEHHHHHHHHHH-C-----CCBCTTHHHHHHHHHHH
T ss_pred eEEEECHHHHHHHHhc-C-----CCcCccHHHHHHHHHHH
Confidence 9999999999999986 1 38999999999988763
No 5
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.96 E-value=1.4e-27 Score=204.76 Aligned_cols=165 Identities=21% Similarity=0.265 Sum_probs=132.3
Q ss_pred HHHhhhcCeEEEEcCCCcEEeeeeccccchhhhhccCCceeEEEEEEEEeCCCeEEEEEecCCCCcCCCceecccCccCC
Q 022053 82 QRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPL 161 (303)
Q Consensus 82 q~~lm~eE~~~vvDe~d~~iG~~tr~~~H~~~~i~~~gl~Hravsv~I~n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve 161 (303)
+++.|.+|.+++||++++++|..+|..+|. .+..|+++++++++.+|+|||++|+..+..+||+|++|+||+++
T Consensus 3 ~~~~~~~E~~~i~d~~~~~~g~~~r~~~~~------~~~~~~~~~v~i~~~~~~vLl~~R~~~~~~~~g~w~l~pGG~ve 76 (180)
T 2fkb_A 3 QRRLASTEWVDIVNEENEVIAQASREQMRA------QCLRHRATYIVVHDGMGKILVQRRTETKDFLPGMLDATAGGVVQ 76 (180)
T ss_dssp -----CCCEEEEECTTSCEEEEEEHHHHHH------HTCCEEEEEEEEECSSSCEEEEEECSSCSSSTTCEESSBCCBCB
T ss_pred ccccCCCeeEEEECCCCCEeeEEEHHHhhc------cCceeeEEEEEEECCCCEEEEEECCCCCccCCCcEEeecCCCCC
Confidence 344455789999999999999999998773 68899999999999999999999998888889999995599999
Q ss_pred CCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCceeeeEEEEEEcCCCCCCcceEEEEEEEEEecCcCCCCcccccc
Q 022053 162 YRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAE 241 (303)
Q Consensus 162 ~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~l~~l~~i~y~~~~~~~~~ehei~~vf~~~~d~~i~~~~~EV~~ 241 (303)
.||+ +.+||+||++||||+.+.. +.+++.+.+... ..+.+.++|.+.....+.++++|+.+
T Consensus 77 ~gE~---------~~~aa~REl~EEtGl~~~~-----~~~l~~~~~~~~-----~~~~~~~~f~~~~~~~~~~~~~E~~~ 137 (180)
T 2fkb_A 77 ADEQ---------LLESARREAEEELGIAGVP-----FAEHGQFYFEDK-----NCRVWGALFSCVSHGPFALQEDEVSE 137 (180)
T ss_dssp TTCC---------HHHHHHHHHHHHHCCBSCC-----CEEEEEEEEEET-----TEEEEEEEEEEECCCCCCCCTTTEEE
T ss_pred CCCC---------HHHHHHHHHHHHHCCCccc-----eEEEEEEEecCC-----CceEEEEEEEEecCCCcCCChhHhhe
Confidence 9999 8999999999999998753 345666655432 12456677777755566677889999
Q ss_pred EEEEcHHHHHHHHHhccCCCCCcccCHHHHHHHHHHHHH
Q 022053 242 YKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFK 280 (303)
Q Consensus 242 ~~Wvs~eEL~~ll~~~~~~~~~~~ftPw~~~i~~~~l~~ 280 (303)
++|++++++.+++. .|+|..+.++..|+..
T Consensus 138 ~~W~~~~el~~~~~---------~~~~~~~~~l~~~~~~ 167 (180)
T 2fkb_A 138 VCWLTPEEITARCD---------EFTPDSLKALALWMKR 167 (180)
T ss_dssp EEEECHHHHHTTGG---------GBCHHHHHHHHHHHHH
T ss_pred EEEecHHHHHHHHH---------HhCCcHHHHHHHHHHh
Confidence 99999999988653 4778888888777543
No 6
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.93 E-value=4.8e-25 Score=187.38 Aligned_cols=142 Identities=21% Similarity=0.294 Sum_probs=117.4
Q ss_pred cCeEEEEcCCCcEEeeeecccc---chhhhhccCCceeEEEEEEEEeCCCeEEEEEecCCCCcCCCcee-cccCccCCCC
Q 022053 88 EDECILVDENDRVVGHENKYNC---HLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWT-NTCCSHPLYR 163 (303)
Q Consensus 88 eE~~~vvDe~d~~iG~~tr~~~---H~~~~i~~~gl~Hravsv~I~n~~g~lLLqqRs~~K~~~PG~W~-~p~gGhve~g 163 (303)
+|.+++||.+|+++|..+|..+ |. . |++++++|++.+|++||+||+..+..+||+|+ +| ||++++|
T Consensus 6 ~E~~~~~d~~~~~~g~~~r~~~~l~~~------~---~~~v~v~i~~~~~~vLl~~r~~~~~~~~g~w~~~P-gG~ve~g 75 (171)
T 1q27_A 6 DERLDLVNERDEVVGQILRTDPALRWE------R---VRVVNAFLRNSQGQLWIPRRSPSKSLFPNALDVSV-GGAVQSG 75 (171)
T ss_dssp SSEEEEESSSSCEEEEEESSCTTSCTT------S---CEEEEEEEEETTTEEEECCSCCSSSCCCCSCCCSE-EEECSSS
T ss_pred ceeeeeecCCCCEeceEEhhhhccccc------c---ceEEEEEEECCCCeEEEEEecCCCCCCCCcccccc-CccccCC
Confidence 5899999999999999999988 73 2 99999999999999999999888888999999 76 9999999
Q ss_pred CChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCceeeeEEEE-EEcCCCCCCcceEEEEEEEEEecCcCCCCccccccE
Q 022053 164 ESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRIL-YKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEY 242 (303)
Q Consensus 164 Es~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~l~~l~~i~-y~~~~~~~~~ehei~~vf~~~~d~~i~~~~~EV~~~ 242 (303)
|+ +.+||+||++||||+.+... ++.+++.+. |..+. +.+.++|.+..+..+.++++|+.++
T Consensus 76 Es---------~~~aa~REl~EEtGl~~~~~---~l~~~~~~~~~~~~~------~~~~~~f~~~~~~~~~~~~~E~~~~ 137 (171)
T 1q27_A 76 ET---------YEEAFRREAREELNVEIDAL---SWRPLASFSPFQTTL------SSFMCVYELRSDATPIFNPNDISGG 137 (171)
T ss_dssp SC---------HHHHHHHHHHHHHSCTTSSS---CEEEEEEECSSSSCC------SSEEEEEEEECCCCCCSCTTTCSCC
T ss_pred CC---------HHHHHHHHHHHHHCCccccc---ceEEEEEEeccCCCC------ccEEEEEEEEECCccccCchhhheE
Confidence 99 89999999999999998632 355666654 33221 2256777776655666777899999
Q ss_pred EEEcHHHHHHHHHhc
Q 022053 243 KYVNREQLKELLRKA 257 (303)
Q Consensus 243 ~Wvs~eEL~~ll~~~ 257 (303)
+|++++++.+++...
T Consensus 138 ~W~~~~el~~~~~~~ 152 (171)
T 1q27_A 138 EWLTPEHLLARIAAG 152 (171)
T ss_dssp EEECHHHHHHHHHHH
T ss_pred EEecHHHHHHHHhcC
Confidence 999999999987763
No 7
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.83 E-value=2e-19 Score=150.00 Aligned_cols=129 Identities=20% Similarity=0.221 Sum_probs=101.3
Q ss_pred CceeEEEEEEEEeCCCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCc
Q 022053 119 NLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDE 198 (303)
Q Consensus 119 gl~Hravsv~I~n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~ 198 (303)
...|.++.++|++.+|++||+||...+..++|+|.+| ||+++.||+ +.+||+||++||||+.+...
T Consensus 5 ~~~~~~v~~vi~~~~~~vLL~~r~~~~~~~~g~w~~P-gG~ve~gE~---------~~~aa~REl~EE~Gl~~~~~---- 70 (153)
T 3grn_A 5 KPYIISVYALIRNEKGEFLLLRRSENSRTNAGKWDLP-GGKVNPDES---------LKEGVAREVWEETGITMVPG---- 70 (153)
T ss_dssp SCEEEEEEEEEECTTCCEEEEEECTTCSSSTTCEECS-EEECCTTCC---------HHHHHHHHHHHHHCCCCCCC----
T ss_pred CceEEEEEEEEEcCCCcEEEEEEcCCCCCCCCeEECc-eeecCCCCC---------HHHHHHhhhhhhhCcEeecc----
Confidence 4588999999999899999999998767899999998 999999999 89999999999999988643
Q ss_pred eeeeEEEEEEcCCCCCCcceEEEEEEEEEe-cCcCCCCccccccEEEEcHHHHHHHHHhccCCCCCcc-cCHHHHHHHHH
Q 022053 199 FTPLGRILYKAPSDGKWGEHELDYLLFIVR-DVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLK-LSPWFRLVVDN 276 (303)
Q Consensus 199 l~~l~~i~y~~~~~~~~~ehei~~vf~~~~-d~~i~~~~~EV~~~~Wvs~eEL~~ll~~~~~~~~~~~-ftPw~~~i~~~ 276 (303)
.+++.+.+..+. .+.+.++|.+.. ...+.++ +|+.+++|++++++.++ . +.|+++.+++.
T Consensus 71 -~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-~e~~~~~W~~~~el~~~-----------~~~~~~~~~~l~~ 132 (153)
T 3grn_A 71 -DIAGQVNFELTE-----KKVIAIVFDGGYVVADVKLS-YEHIEYSWVSLEKILGM-----------ETLPAYFRDFFER 132 (153)
T ss_dssp -SEEEEEEEECSS-----CEEEEEEEEEEECCCCCCCC-TTEEEEEEECHHHHTTC-----------SSSCHHHHHHHHH
T ss_pred -eEEEEEEEecCC-----ceEEEEEEEEEecCCcEecC-CCcceEEEEEHHHhhhc-----------ccchHHHHHHHHH
Confidence 345655554331 244556666654 3444443 78999999999998653 4 78999988887
Q ss_pred HHH
Q 022053 277 FLF 279 (303)
Q Consensus 277 ~l~ 279 (303)
|+.
T Consensus 133 l~~ 135 (153)
T 3grn_A 133 FDR 135 (153)
T ss_dssp HHH
T ss_pred Hhc
Confidence 743
No 8
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.82 E-value=1.1e-18 Score=145.47 Aligned_cols=121 Identities=25% Similarity=0.298 Sum_probs=95.8
Q ss_pred CCceeEEEEEEEEeCCCeEEEEEecCC--CCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCC
Q 022053 118 LNLLHRAFSVFLFNSKYELLLQQRSGT--KVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVP 195 (303)
Q Consensus 118 ~gl~Hravsv~I~n~~g~lLLqqRs~~--K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~ 195 (303)
.+..|+++.++|++.+|++||+||... +..++|.|++| ||+++.||+ +.+||+||++||||+.+..
T Consensus 9 ~~~~~~~~~~vi~~~~~~vLl~~r~~~~~~~~~~~~w~~P-gG~ve~gE~---------~~~aa~RE~~EEtGl~~~~-- 76 (159)
T 1sjy_A 9 VPVELRAAGVVLLNERGDILLVQEKGIPGHPEKAGLWHIP-SGAVEDGEN---------PQDAAVREACEETGLRVRP-- 76 (159)
T ss_dssp CCCCEEEEEEEEBCTTCCEEEEEESCC----CCCCCEECS-EEECCTTSC---------HHHHHHHHHHHHHSCCEEE--
T ss_pred CCeEEEeEEEEEEeCCCCEEEEEecccCcCCCCCCeEECC-ccccCCCCC---------HHHHHHHHHHHHHCcccee--
Confidence 577899999999998899999999852 45689999998 999999999 8999999999999999763
Q ss_pred CCceeeeEEEEEEcCCCCCCcceEEEEEEEEEe-cCc-CCC-CccccccEEEEcHHHHHHHHHhc
Q 022053 196 VDEFTPLGRILYKAPSDGKWGEHELDYLLFIVR-DVS-VNP-NPDEVAEYKYVNREQLKELLRKA 257 (303)
Q Consensus 196 ~~~l~~l~~i~y~~~~~~~~~ehei~~vf~~~~-d~~-i~~-~~~EV~~~~Wvs~eEL~~ll~~~ 257 (303)
+.+++.+.+..+. + .+.+.++|.+.. ... +.+ +++|+.+++|++++++.+++..+
T Consensus 77 ---~~~l~~~~~~~~~--~--~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~ 134 (159)
T 1sjy_A 77 ---VKFLGAYLGRFPD--G--VLILRHVWLAEPEPGQTLAPAFTDEIAEASFVSREDFAQLYAAG 134 (159)
T ss_dssp ---EEEEEEEEEECTT--S--CEEEEEEEEEEECSSCCCCCCCCSSEEEEEEECHHHHHHHHHTT
T ss_pred ---eEEEEEEecccCC--C--ceEEEEEEEEEccCCCccccCCCCceeEEEEecHHHHHHhhhcc
Confidence 3456665544332 2 356677777765 333 555 67899999999999999998864
No 9
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.80 E-value=3.8e-19 Score=150.04 Aligned_cols=137 Identities=20% Similarity=0.203 Sum_probs=87.5
Q ss_pred CCceeEEEEEEEEeCCCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCC
Q 022053 118 LNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVD 197 (303)
Q Consensus 118 ~gl~Hravsv~I~n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~ 197 (303)
.+..|+++.++|++.+|++||+||+..+..+||+|++| ||++++||+ +++||+||++|||||.+....+.
T Consensus 23 ~~~~~~~~~~~ii~~~~~vLL~~r~~~~~~~~g~w~lP-gG~ve~gE~---------~~~aa~REl~EEtGl~~~~~~~~ 92 (165)
T 3oga_A 23 NAMRQRTIVCPLIQNDGCYLLCKMADNRGVFPGQWALS-GGGVEPGER---------IEEALRREIREELGEQLILSDIT 92 (165)
T ss_dssp -CCEEEEEEEEEEEETTEEEEEEECC------CCEECC-CEECCTTCC---------HHHHHHHHHHHHHCSSCCEEEEE
T ss_pred CCcceEEEEEEEEeCCCEEEEEEecCCCCCCCCeEECC-ccccCCCCC---------HHHHHHHHHHHHhCCCcccccee
Confidence 47789999999998899999999998777899999998 999999999 89999999999999997632211
Q ss_pred ceeeeEEEEEEcCCCCCCcceE-EEEEEEEEe-cCcCCCCccccccEEEEcHHHHHHHHHhccCCCCCcccCHHHHHHHH
Q 022053 198 EFTPLGRILYKAPSDGKWGEHE-LDYLLFIVR-DVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVD 275 (303)
Q Consensus 198 ~l~~l~~i~y~~~~~~~~~ehe-i~~vf~~~~-d~~i~~~~~EV~~~~Wvs~eEL~~ll~~~~~~~~~~~ftPw~~~i~~ 275 (303)
.+.+...+.+....+..+.... +.++|.+.. ...+.+ .+|+.+++|++++|+.++ .+.|..+.+++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~E~~~~~W~~~~el~~~-----------~~~~~~~~~l~ 160 (165)
T 3oga_A 93 PWTFRDDIRIKTYADGRQEEIYMIYLIFDCVSANRDICI-NDEFQDYAWVKPEELALY-----------DLNVATRHTLA 160 (165)
T ss_dssp EEEEEEEEEEEEC--CCEEEEEEEEEEEEEEESCCCCCC-CTTEEEEEEECGGGGGGS-----------CBCHHHHHHHH
T ss_pred eeeeecceeeEecCCCCceeEEEEEEEEEeeccCCCccC-CchheeeEEccHHHHhhC-----------CCCHHHHHHHH
Confidence 1111111111111122222111 223344433 233444 378999999999998664 56776666655
Q ss_pred H
Q 022053 276 N 276 (303)
Q Consensus 276 ~ 276 (303)
.
T Consensus 161 ~ 161 (165)
T 3oga_A 161 L 161 (165)
T ss_dssp H
T ss_pred H
Confidence 3
No 10
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.80 E-value=7.3e-19 Score=145.36 Aligned_cols=124 Identities=20% Similarity=0.197 Sum_probs=89.8
Q ss_pred eeEEEEEEEEeCCCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCcee
Q 022053 121 LHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFT 200 (303)
Q Consensus 121 ~Hravsv~I~n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~l~ 200 (303)
.|.+++++|++ +|++||+||. .|.|.+| ||++++||+ +.+||+||++|||||.+.. ..
T Consensus 3 ~~~aag~vv~~-~~~vLL~~r~------~g~W~~P-gG~ve~gEt---------~~~aa~RE~~EEtGl~~~~-----~~ 60 (134)
T 3i7u_A 3 KEFSAGGVLFK-DGEVLLIKTP------SNVWSFP-KGNIEPGEK---------PEETAVREVWEETGVKGEI-----LD 60 (134)
T ss_dssp EEEEEEEEEEE-TTEEEEEECT------TSCEECC-EEECCTTCC---------HHHHHHHHHHHHHSEEEEE-----EE
T ss_pred cEEEEEEEEEE-CCEEEEEEeC------CCcEECC-eeEecCCCC---------HHHHHHHHHHHhcCceEEE-----ee
Confidence 35677788876 5899999885 3789998 999999999 8999999999999999763 24
Q ss_pred eeEEEEEEcCCCCCCcceEEEEEEEEEe-cCcCCCCccccccEEEEcHHHHHHHHHhccCCCCCcccCHHHHHHHHHHHH
Q 022053 201 PLGRILYKAPSDGKWGEHELDYLLFIVR-DVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLF 279 (303)
Q Consensus 201 ~l~~i~y~~~~~~~~~ehei~~vf~~~~-d~~i~~~~~EV~~~~Wvs~eEL~~ll~~~~~~~~~~~ftPw~~~i~~~~l~ 279 (303)
+++.+.|..+..+... +...++|.+.. +..+.++ +|+.+++|++++|+.+++. .|..+.+++.++.
T Consensus 61 ~l~~~~~~~~~~~~~~-~~~~~~f~~~~~~~~~~~~-~E~~~~~W~~~~e~~~~l~-----------~~~~r~il~~a~~ 127 (134)
T 3i7u_A 61 YIGEIHYWYTLKGERI-FKTVKYYLMKYKEGEPRPS-WEVKDAKFFPIKEAKKLLK-----------YKGDKEIFEKALK 127 (134)
T ss_dssp EEEEEEEEEEETTEEE-EEEEEEEEEEEEEECCCCC-TTSSEEEEEEHHHHHHHBC-----------SHHHHHHHHHHHH
T ss_pred eeeeeeEEecCCCceE-EEEEEEEEEEEcCCcCcCC-hhheEEEEEEHHHHhhhcC-----------ChHHHHHHHHHHH
Confidence 5665555443332222 33445566654 4455555 6899999999999988632 3556777777654
No 11
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.79 E-value=7.2e-19 Score=144.18 Aligned_cols=128 Identities=20% Similarity=0.140 Sum_probs=95.2
Q ss_pred CceeEEEEEEEEeCCCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCc
Q 022053 119 NLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDE 198 (303)
Q Consensus 119 gl~Hravsv~I~n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~ 198 (303)
...++++.++|++.+|+|||+||...+. ++|+|.+| ||+++.||+ +.+||+||+.||||+.+... +
T Consensus 5 ~~~~~~~~~vi~~~~~~vLl~~r~~~~~-~~g~w~lP-gG~ve~gE~---------~~~aa~RE~~EE~Gl~~~~~---~ 70 (144)
T 3r03_A 5 LPILLVTAAALIDPDGRVLLAQRPPGKS-LAGLWEFP-GGKLEPGET---------PEAALVRELAEELGVDTRAS---C 70 (144)
T ss_dssp -CEEEEEEEEEBCTTSCEEEEECCTTSS-STTCEECS-EEECCTTCC---------HHHHHHHHHHHHHCCBCCGG---G
T ss_pred CceeEEEEEEEEcCCCEEEEEEeCCCCC-CCCcEECC-CcEecCCCC---------HHHHHHHHHHHHhCceeecc---c
Confidence 4578888999999889999999986654 89999998 999999999 89999999999999998643 3
Q ss_pred eeeeEEEEEEcCCCCCCcceEEEEEEEEEecCcCCCCccccccEEEEcHHHHHHHHHhccCCCCCcccCHHHHHHHHHH
Q 022053 199 FTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNF 277 (303)
Q Consensus 199 l~~l~~i~y~~~~~~~~~ehei~~vf~~~~d~~i~~~~~EV~~~~Wvs~eEL~~ll~~~~~~~~~~~ftPw~~~i~~~~ 277 (303)
+..++.+.+... ..+...++|.+..... .++++|+.+++|++++++.++ .+.|..+.+++.+
T Consensus 71 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-~~~~~e~~~~~W~~~~el~~~-----------~~~~~~~~~l~~~ 132 (144)
T 3r03_A 71 LAPLAFASHSYD-----TFHLLMPLYACRSWRG-RATAREGQTLAWVRAERLREY-----------PMPPADLPLIPIL 132 (144)
T ss_dssp CEEEEEEEEECS-----SSEEEEEEEEECCCBS-CCCCCSSCEEEEECGGGGGGS-----------CCCTTTTTHHHHH
T ss_pred eEEEEeeeccCC-----CeEEEEEEEEEEecCC-ccCCCCcceEEEEeHHHhccC-----------CCCcchHHHHHHH
Confidence 344444444332 1244556666654222 345678999999999998664 5666667677665
No 12
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.78 E-value=3.2e-18 Score=140.56 Aligned_cols=123 Identities=14% Similarity=0.050 Sum_probs=86.9
Q ss_pred eEEEEEEEEeCCCeEEEEEecCCCCc-CCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCcee
Q 022053 122 HRAFSVFLFNSKYELLLQQRSGTKVT-FPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFT 200 (303)
Q Consensus 122 Hravsv~I~n~~g~lLLqqRs~~K~~-~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~l~ 200 (303)
..++.++|++ +|++||+||...+.+ ++|+|.+| ||++++||+ +.+||+||++||||+.+.. ..
T Consensus 6 ~~~v~~vi~~-~~~vLL~~r~~~~~~~~~g~w~lP-gG~ve~gE~---------~~~aa~REl~EE~Gl~~~~-----~~ 69 (140)
T 3gwy_A 6 IEVVAAVIRL-GEKYLCVQRGQTKFSYTSFRYEFP-GGKVEEGES---------LQEALQREIMEEMDYVIEV-----GE 69 (140)
T ss_dssp EEEEEEEEEE-TTEEEEEEC---------CCEECS-EEECCTTCC---------HHHHHHHHHHHHHCCCEEE-----EE
T ss_pred EEEEEEEEEe-CCEEEEEEecCCCCCCCCCeEECC-CccCCCCCC---------HHHHHHHHHHHhhCcEEEe-----ce
Confidence 4456667777 799999999876543 89999998 999999999 8999999999999998763 24
Q ss_pred eeEEEEEEcCCCCCCcceEEEEEEEEEecCcCCCCccccccEEEEcHHHHHHHHHhccCCCCCcccCHHHHHHHHHH
Q 022053 201 PLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNF 277 (303)
Q Consensus 201 ~l~~i~y~~~~~~~~~ehei~~vf~~~~d~~i~~~~~EV~~~~Wvs~eEL~~ll~~~~~~~~~~~ftPw~~~i~~~~ 277 (303)
+++.+.+..+. .+...++|.+..... .++++|+.+++|++++++.++ .+.|..+.+++.+
T Consensus 70 ~~~~~~~~~~~-----~~~~~~~f~~~~~~~-~~~~~E~~~~~W~~~~el~~~-----------~~~~~~~~il~~~ 129 (140)
T 3gwy_A 70 KLLTVHHTYPD-----FEITMHAFLCHPVGQ-RYVLKEHIAAQWLSTREMAIL-----------DWAEADKPIVRKI 129 (140)
T ss_dssp EEEEEECCCSS-----CCEEEEEEEEEECCS-CCCCCSSCEEEEECHHHHTTS-----------CBCGGGHHHHHHH
T ss_pred EEEEEEEEeCC-----ceEEEEEEEEEecCC-cccccccceeEeccHHHHhhC-----------CCCcccHHHHHHH
Confidence 55555443321 245566777765322 344578999999999998653 5777778877766
No 13
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.77 E-value=3.1e-18 Score=143.39 Aligned_cols=129 Identities=19% Similarity=0.162 Sum_probs=95.5
Q ss_pred CceeEEEEEEEEeCCCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCc
Q 022053 119 NLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDE 198 (303)
Q Consensus 119 gl~Hravsv~I~n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~ 198 (303)
...++++.++|++.+|+|||+||...+ .++|.|.+| ||+++.||+ +.+||+||+.||||+.+... +
T Consensus 26 ~~~~~~~~~~i~~~~~~vLL~~r~~~~-~~~g~w~~P-gG~ve~gE~---------~~~aa~RE~~EEtGl~~~~~---~ 91 (158)
T 3hhj_A 26 SSLLIVVACALLDQDNRVLLTQRPEGK-SLAGLWEFP-GGKVEQGET---------PEASLIRELEEELGVHVQAD---N 91 (158)
T ss_dssp -CEEEEEEEEEBCTTSEEEEEECCCTT-SCCCCCBCC-EEECCTTCC---------HHHHHHHHHHHHHCCBCCGG---G
T ss_pred CceEEEEEEEEEeCCCEEEEEEeCCCC-CCCCEEECC-ceeecCCCC---------HHHHHHHHHHHHhCcEeecc---e
Confidence 457888889999989999999998654 489999998 999999999 89999999999999998643 3
Q ss_pred eeeeEEEEEEcCCCCCCcceEEEEEEEEEecCcCCCCccccccEEEEcHHHHHHHHHhccCCCCCcccCHHHHHHHHHHH
Q 022053 199 FTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFL 278 (303)
Q Consensus 199 l~~l~~i~y~~~~~~~~~ehei~~vf~~~~d~~i~~~~~EV~~~~Wvs~eEL~~ll~~~~~~~~~~~ftPw~~~i~~~~l 278 (303)
+..++.+.+..+. .+...++|.+.... ..++..|+.+++|++++|+.++ .+.+..+.+++.++
T Consensus 92 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~~~~e~~~~~W~~~~el~~~-----------~~~~~~~~il~~~~ 154 (158)
T 3hhj_A 92 LFPLTFASHGYET-----FHLLMPLYFCSHYK-GVAQGREGQNLKWIFINDLDKY-----------PMPEADKPLVQVLK 154 (158)
T ss_dssp CEEEEEEEEECSS-----CEEEEEEEEESCCB-SCCCCTTSCEEEEEEGGGGGGS-----------CCCTTTHHHHHHHH
T ss_pred EEEEEEEeeccCC-----cEEEEEEEEEEECC-CccCCccccceEEEcHHHHhhC-----------CCCcchHHHHHHHH
Confidence 3345444444321 24455566665322 2445678999999999998653 46666777776654
No 14
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=99.77 E-value=7e-18 Score=140.60 Aligned_cols=131 Identities=14% Similarity=0.081 Sum_probs=95.6
Q ss_pred eeEEEEEEEEeCCCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCcee
Q 022053 121 LHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFT 200 (303)
Q Consensus 121 ~Hravsv~I~n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~l~ 200 (303)
...+++++|++.+|++||+||+.. .++|.|.+| ||++++||+ +.+||+||++||||+.+.. ..+.
T Consensus 17 ~~~~v~~vi~~~~~~vLl~~r~~~--~~~g~w~~P-gG~ve~gE~---------~~~aa~REl~EEtGl~~~~---~~~~ 81 (160)
T 1rya_A 17 PLVSLDFIVENSRGEFLLGKRTNR--PAQGYWFVP-GGRVQKDET---------LEAAFERLTMAELGLRLPI---TAGQ 81 (160)
T ss_dssp CEEEEEEEEECTTSCEEEEEECSS--SSTTSEECC-EEECCTTCC---------HHHHHHHHHHHHHSSCCCG---GGSE
T ss_pred cEEEEEEEEEcCCCEEEEEeccCC--CCCCEEECC-ccccCCCCC---------HHHHHHHHHHHHHCCCCCc---ccce
Confidence 457888999998899999999863 369999998 999999999 8999999999999998631 1345
Q ss_pred eeEEEEEEcCCC---CCCcceEEEEEEEEEe-cCcCCCCccccccEEEEcHHHHHHHHHhccCCCCCcccCHHHHHHHHH
Q 022053 201 PLGRILYKAPSD---GKWGEHELDYLLFIVR-DVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDN 276 (303)
Q Consensus 201 ~l~~i~y~~~~~---~~~~ehei~~vf~~~~-d~~i~~~~~EV~~~~Wvs~eEL~~ll~~~~~~~~~~~ftPw~~~i~~~ 276 (303)
+++.+.+..+.. .....+.+.++|.+.. ...+.++++|+.+++|++++++.++ ..+.|+.+.++..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~----------~~~~~~~~~~l~~ 151 (160)
T 1rya_A 82 FYGVWQHFYDDNFSGTDFTTHYVVLGFRFRVSEEELLLPDEQHDDYRWLTSDALLAS----------DNVHANSRAYFLA 151 (160)
T ss_dssp EEEEEEEEESSBTTBSSSCEEEEEEEEEEECCGGGCCCCSSSEEEEEEECHHHHHHC----------TTBCHHHHGGGCH
T ss_pred EEEEEeEEEcccccCCCcCcEEEEEEEEEEcCccccccCCCccceEEEecHHHHhhc----------cccCHHHHHHHHH
Confidence 666654433321 1112256667777765 3445566789999999999999773 2456766665543
No 15
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.77 E-value=7.8e-18 Score=136.12 Aligned_cols=122 Identities=20% Similarity=0.192 Sum_probs=88.4
Q ss_pred eEEEEEEEEeCCCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCceee
Q 022053 122 HRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTP 201 (303)
Q Consensus 122 Hravsv~I~n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~l~~ 201 (303)
..+++++|++ +|++||+||.. |.|.+| ||+++.||+ +.+||+||++||||+.+.. ..+
T Consensus 4 ~~~~~~vi~~-~~~vLl~~r~~------~~w~~P-gG~ve~gE~---------~~~aa~RE~~EE~Gl~~~~-----~~~ 61 (134)
T 2pbt_A 4 EFSAGGVLFK-DGEVLLIKTPS------NVWSFP-KGNIEPGEK---------PEETAVREVWEETGVKGEI-----LDY 61 (134)
T ss_dssp EEEEEEEEEE-TTEEEEEECTT------SCEECC-EEECCTTCC---------HHHHHHHHHHHHHSEEEEE-----EEE
T ss_pred ceEEEEEEEE-CCEEEEEEeCC------CcEECC-ccccCCCCC---------HHHHHHHHHHHHHCCccEE-----eee
Confidence 4567788888 68999999964 899998 999999999 8999999999999999763 245
Q ss_pred eEEEEEEcCCCCCCcceEEEEEEEEEe-cCcCCCCccccccEEEEcHHHHHHHHHhccCCCCCcccCHHHHHHHHHHH
Q 022053 202 LGRILYKAPSDGKWGEHELDYLLFIVR-DVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFL 278 (303)
Q Consensus 202 l~~i~y~~~~~~~~~ehei~~vf~~~~-d~~i~~~~~EV~~~~Wvs~eEL~~ll~~~~~~~~~~~ftPw~~~i~~~~l 278 (303)
++.+.+..+..+. ..+...++|.+.. +..+.++. |+.+++|++++++.++ .+.|..+.+++.++
T Consensus 62 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-e~~~~~W~~~~el~~~-----------~~~~~~~~~l~~~~ 126 (134)
T 2pbt_A 62 IGEIHYWYTLKGE-RIFKTVKYYLMKYKEGEPRPSW-EVKDAKFFPIKEAKKL-----------LKYKGDKEIFEKAL 126 (134)
T ss_dssp EEEEEEEEEETTE-EEEEEEEEEEEEEEEECCCCCT-TSSEEEEEEHHHHHHH-----------CCSHHHHHHHHHHH
T ss_pred eeEEEEEeeCCCc-EEEEEEEEEEEEecCCCcCCCc-ceeEEEEEcHHHHHhh-----------hcchhHHHHHHHHH
Confidence 5555443332221 1245556676654 33444444 9999999999999876 34556666666554
No 16
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.77 E-value=1.9e-17 Score=134.71 Aligned_cols=113 Identities=21% Similarity=0.234 Sum_probs=84.1
Q ss_pred eeEEEEEEEEeC---CCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCC
Q 022053 121 LHRAFSVFLFNS---KYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVD 197 (303)
Q Consensus 121 ~Hravsv~I~n~---~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~ 197 (303)
.+++++++|++. ++++||+||+. .+|.|.+| ||++++||+ +.+||+||++||||+.+..+.+
T Consensus 2 ~~~~~~~vi~~~~~~~~~vLl~~r~~----~~~~w~~P-gG~ve~gE~---------~~~aa~RE~~EEtGl~~~~~~~- 66 (138)
T 1ktg_A 2 VVKAAGLVIYRKLAGKIEFLLLQASY----PPHHWTPP-KGHVDPGED---------EWQAAIRETKEEANITKEQLTI- 66 (138)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEEESS----TTCCEESS-EEECCTTCC---------HHHHHHHHHHHHHCCCGGGEEE-
T ss_pred ceEEEEEEEEEecCCCcEEEEEEccC----CCCcEeCC-ccccCCCCC---------HHHHHHHHHHHHHCCCccceEE-
Confidence 457888888876 46899999872 36899998 999999999 8999999999999997654321
Q ss_pred ce-eeeEEEEEEcCCCCCCcceEEEEEEEEEecC-cCCCCccccccEEEEcHHHHHHHH
Q 022053 198 EF-TPLGRILYKAPSDGKWGEHELDYLLFIVRDV-SVNPNPDEVAEYKYVNREQLKELL 254 (303)
Q Consensus 198 ~l-~~l~~i~y~~~~~~~~~ehei~~vf~~~~d~-~i~~~~~EV~~~~Wvs~eEL~~ll 254 (303)
+ .+++.+.|..+ ..+...++|.+.... ....+++|+.+++|++++++.+++
T Consensus 67 -~~~~~~~~~~~~~-----~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~ 119 (138)
T 1ktg_A 67 -HEDCHETLFYEAK-----GKPKSVKYWLAKLNNPDDVQLSHEHQNWKWCELEDAIKIA 119 (138)
T ss_dssp -EEEEEEEEEEEET-----TEEEEEEEEEEEECSCCCCCCCTTEEEEEEECHHHHHHHH
T ss_pred -eccccceEEEEeC-----CCceEEEEEEEEecCCcccCCCchhcEeEeccHHHHHHhh
Confidence 1 23444555443 124566677776543 344567899999999999999874
No 17
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=99.76 E-value=1.2e-17 Score=136.91 Aligned_cols=128 Identities=16% Similarity=0.178 Sum_probs=90.7
Q ss_pred eEEEEEEEEeCC-CeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCcee
Q 022053 122 HRAFSVFLFNSK-YELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFT 200 (303)
Q Consensus 122 Hravsv~I~n~~-g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~l~ 200 (303)
+.+++++|++.+ |++||+||+.. ||.|++| ||+++.||+ +.+||+||++||||+.+... ++.
T Consensus 9 ~~~v~~~i~~~~~~~vLl~~r~~~----~g~w~~P-gG~ve~gE~---------~~~aa~RE~~EEtGl~~~~~---~~~ 71 (150)
T 2o1c_A 9 PVSILVVIYAQDTKRVLMLQRRDD----PDFWQSV-TGSVEEGET---------APQAAMREVKEEVTIDVVAE---QLT 71 (150)
T ss_dssp SEEEEEEEEETTTCEEEEEECSSS----TTCEESE-EEECCTTCC---------HHHHHHHHHHHHHCCCHHHH---TCC
T ss_pred ceEEEEEEEeCCCCEEEEEEecCC----CCceECC-ccccCCCCC---------HHHHHHHHHHHHhCCCcccc---cee
Confidence 468888999875 89999998754 7999998 999999999 89999999999999998642 122
Q ss_pred eeE---EEEEEcC------CCCCCcceEEEEEEEEEecCcCCCCccccccEEEEcHHHHHHHHHhccCCCCCcccCHHHH
Q 022053 201 PLG---RILYKAP------SDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFR 271 (303)
Q Consensus 201 ~l~---~i~y~~~------~~~~~~ehei~~vf~~~~d~~i~~~~~EV~~~~Wvs~eEL~~ll~~~~~~~~~~~ftPw~~ 271 (303)
+++ ...|... ..++ ..+...++|.+.......+..+|+.+++|++++++.++ .+.|..+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~f~~~~~~~~~~~~~E~~~~~W~~~~el~~~-----------~~~~~~~ 139 (150)
T 2o1c_A 72 LIDCQRTVEFEIFSHLRHRYAPG-VTRNTESWFCLALPHERQIVFTEHLAYKWLDAPAAAAL-----------TKSWSNR 139 (150)
T ss_dssp EEEEEEEEEEECCGGGGGGBCTT-CCEEEEEEEEEEESSCCCCCCSSSSCEEEEEHHHHHHH-----------CSCHHHH
T ss_pred EEeeeceeeeeeecccccccCCC-CcceEEEEEEEEcCCCCCcChhHhhccEeecHHHHHhh-----------hcCHHHH
Confidence 332 2223110 1111 12456677777654333334479999999999999876 3566677
Q ss_pred HHHHHHH
Q 022053 272 LVVDNFL 278 (303)
Q Consensus 272 ~i~~~~l 278 (303)
.+++.++
T Consensus 140 ~~l~~~~ 146 (150)
T 2o1c_A 140 QAIEQFV 146 (150)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 7766653
No 18
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.76 E-value=3.8e-18 Score=144.14 Aligned_cols=129 Identities=12% Similarity=0.108 Sum_probs=98.3
Q ss_pred CCceeEEEEEEEEeCC-CeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCC
Q 022053 118 LNLLHRAFSVFLFNSK-YELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPV 196 (303)
Q Consensus 118 ~gl~Hravsv~I~n~~-g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~ 196 (303)
....|.++.++|++.+ |+|||+||. +..|+|.|.+| ||++++||+ +.+||+||++||||+.+..
T Consensus 6 ~~~~~~~v~~vi~~~~~~~vLL~~r~--~~~~~g~w~lP-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~--- 70 (161)
T 3exq_A 6 TQPVELVTMVMVTDPETQRVLVEDKV--NVPWKAGHSFP-GGHVEVGEP---------CATAAIREVFEETGLRLSG--- 70 (161)
T ss_dssp CCCEEEEEEEEEBCTTTCCEEEECCC--CCTTTCSBBCC-CCBCCTTSC---------HHHHHHHHHHHHHCCEESC---
T ss_pred cCCceEEEEEEEEeCCCCEEEEEEcc--CCCCCCCEEcc-ceecCCCCC---------HHHHHHHHHHHhhCcEecC---
Confidence 3558899999999887 799999998 34588899998 999999999 8999999999999999763
Q ss_pred CceeeeEEEEEEcCCCCCCcceEEEEEEEEEe-cCcCCCCccccccEEEEcHHHHHHHHHhccCCCCCcccCHHHHHHHH
Q 022053 197 DEFTPLGRILYKAPSDGKWGEHELDYLLFIVR-DVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVD 275 (303)
Q Consensus 197 ~~l~~l~~i~y~~~~~~~~~ehei~~vf~~~~-d~~i~~~~~EV~~~~Wvs~eEL~~ll~~~~~~~~~~~ftPw~~~i~~ 275 (303)
+.+++.+.+..+... .+.+.++|.+.. ... ++..|+.+++|++++++.++ .+.|.++.+++
T Consensus 71 --~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~--~~~~e~~~~~W~~~~el~~~-----------~~~~~~~~~l~ 132 (161)
T 3exq_A 71 --VTFCGTCEWFDDDRQ---HRKLGLLYRASNFTGT--LKASAEGQLSWLPITALTRE-----------NSAASLPEFLQ 132 (161)
T ss_dssp --CEEEEEEEEECSSCS---SEEEEEEEEECCEESC--CCGGGTTTEEEECGGGCCTT-----------TBCTTHHHHHH
T ss_pred --CcEEEEEecccCCCC---eEEEEEEEEEeccCCc--cCCCccceEEEeeHHHhhhC-----------ccChHHHHHHH
Confidence 345666655543221 244556666543 233 45678899999999998553 57788888888
Q ss_pred HHHH
Q 022053 276 NFLF 279 (303)
Q Consensus 276 ~~l~ 279 (303)
.|+.
T Consensus 133 ~~~~ 136 (161)
T 3exq_A 133 VFTG 136 (161)
T ss_dssp HHTT
T ss_pred HHhh
Confidence 8766
No 19
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.76 E-value=1.9e-17 Score=132.65 Aligned_cols=118 Identities=26% Similarity=0.294 Sum_probs=87.3
Q ss_pred EEEEEEEEeCCCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCceeee
Q 022053 123 RAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPL 202 (303)
Q Consensus 123 ravsv~I~n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~l~~l 202 (303)
.+++++|++.+|++||+||.. |.|++| ||+++.||+ +.+||+||++||||+.+.. ..++
T Consensus 3 ~~~~~vi~~~~~~vLl~~r~~------g~w~~P-gG~ve~gE~---------~~~aa~RE~~EE~Gl~~~~-----~~~~ 61 (126)
T 1vcd_A 3 LGAGGVVFNAKREVLLLRDRM------GFWVFP-KGHPEPGES---------LEEAAVREVWEETGVRAEV-----LLPL 61 (126)
T ss_dssp EEEEEEEECTTSCEEEEECTT------SCEECC-EECCCTTCC---------HHHHHHHHHHHHHCCEEEE-----EEEE
T ss_pred eEEEEEEEcCCCEEEEEEECC------CCccCC-cCcCCCCCC---------HHHHHHHHHHHhhCcEeee-----ccEE
Confidence 467889999889999999874 789998 999999999 8999999999999999763 3456
Q ss_pred EEEEEEcCCCCCCcceEEEEEEEEEe-cCcCCCCccccccEEEEcHHHHHHHHHhccCCCCCcccCHHHHHHHHHHH
Q 022053 203 GRILYKAPSDGKWGEHELDYLLFIVR-DVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFL 278 (303)
Q Consensus 203 ~~i~y~~~~~~~~~ehei~~vf~~~~-d~~i~~~~~EV~~~~Wvs~eEL~~ll~~~~~~~~~~~ftPw~~~i~~~~l 278 (303)
+.+.|..+ +. +...++|.+.. +.. ..+.+|+.+++|++++++.+++ +.|..+.+++.++
T Consensus 62 ~~~~~~~~---~~--~~~~~~~~~~~~~~~-~~~~~e~~~~~w~~~~el~~~~-----------~~~~~~~~l~~~~ 121 (126)
T 1vcd_A 62 YPTRYVNP---KG--VEREVHWFLMRGEGA-PRLEEGMTGAGWFSPEEARALL-----------AFPEDLGLLEVAL 121 (126)
T ss_dssp EEEEEECT---TS--CEEEEEEEEEEEESC-CCCCTTCCEEEEECHHHHHHHB-----------CSHHHHHHHHHHH
T ss_pred eEEEEecC---Cc--eEEEEEEEEEEcCCC-CCCCcceeeeEEcCHHHHHHhh-----------cChhHHHHHHHHH
Confidence 66666542 21 33345555543 233 3345789999999999998762 3455666666553
No 20
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.76 E-value=9.2e-19 Score=146.56 Aligned_cols=119 Identities=13% Similarity=0.099 Sum_probs=82.8
Q ss_pred hccCCceeEEEEEEEEeCCCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccC
Q 022053 115 IESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDV 194 (303)
Q Consensus 115 i~~~gl~Hravsv~I~n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~ 194 (303)
+......|.++.++|++.+|+|||++|+ +|.|.+| ||++++||+ +.+||+||++|||||.+...
T Consensus 14 ~~~~~~~~~~v~~ii~~~~~~vLL~~r~------~~~w~lP-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~~ 77 (153)
T 3eds_A 14 LGHELIFXPSVAAVIKNEQGEILFQYPG------GEYWSLP-AGAIELGET---------PEEAVVREVWEETGLKVQVK 77 (153)
T ss_dssp HTTSCEEEEEEEEEEBCTTCCEEEECC---------CBBCS-EEECCTTSC---------HHHHHHHHHHHHHCEEEEEE
T ss_pred cCCCcEEeeeEEEEEEcCCCeEEEEEcC------CCcEECC-ccccCCCCC---------HHHHHHHHHHHHHCccceee
Confidence 3446789999999999999999999887 7999998 999999999 89999999999999987632
Q ss_pred CCCceeeeEEE-----EEEcCCCCCCcceEEEEEEEEEe-cCcCCCCccccccEEEEcHHHHHHHHHh
Q 022053 195 PVDEFTPLGRI-----LYKAPSDGKWGEHELDYLLFIVR-DVSVNPNPDEVAEYKYVNREQLKELLRK 256 (303)
Q Consensus 195 ~~~~l~~l~~i-----~y~~~~~~~~~ehei~~vf~~~~-d~~i~~~~~EV~~~~Wvs~eEL~~ll~~ 256 (303)
.+++.+ .+..+. +...+.+.++|.+.. ...+.++++|+.+++|++++|+.++...
T Consensus 78 -----~~~~~~~~~~~~~~~~~--~~~~~~~~~~f~~~~~~~~~~~~~~E~~~~~W~~~~el~~l~~~ 138 (153)
T 3eds_A 78 -----KQKGVFGGKEYRYTYSN--GDEVEYIVVVFECEVTSGELRSIDGESLKLQYFSLSEKPPLALP 138 (153)
T ss_dssp -----EEEEEECSGGGEEECTT--SCEEEEEEEEEEEEEEEECCC-------CEEEECGGGCCCBSSC
T ss_pred -----eEEEEecccceeeecCC--CCeEEEEEEEEEEEecCCccccCCCcEEEEEEECHHHCchhccc
Confidence 344433 233332 222244566676654 4456667789999999999999877543
No 21
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.76 E-value=1.8e-17 Score=136.13 Aligned_cols=126 Identities=18% Similarity=0.171 Sum_probs=88.1
Q ss_pred CceeEEEEEEEEeC-CCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCC
Q 022053 119 NLLHRAFSVFLFNS-KYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVD 197 (303)
Q Consensus 119 gl~Hravsv~I~n~-~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~ 197 (303)
...|.++.++|++. +|++||+||. +|.|++| ||+++.||+ +.+||+||+.||||+.+...
T Consensus 15 ~~~~~~~~~vi~~~~~~~vLl~~r~------~g~w~~P-gG~ve~gE~---------~~~aa~RE~~EEtGl~~~~~--- 75 (148)
T 2azw_A 15 YQTRYAAYIIVSKPENNTMVLVQAP------NGAYFLP-GGEIEGTET---------KEEAIHREVLEELGISVEIG--- 75 (148)
T ss_dssp CEECCEEEEECEEGGGTEEEEEECT------TSCEECS-EEECCTTCC---------HHHHHHHHHHHHHSEEEEEE---
T ss_pred eeeeeEEEEEEECCCCCeEEEEEcC------CCCEeCC-CcccCCCCC---------HHHHHHHHHHHHhCCeeEee---
Confidence 44677888888886 7899999984 3899998 999999999 89999999999999997632
Q ss_pred ceeeeEEE---EEEcCCCCCCcceEEEEEEEEEecCcCCCCccccccEEEEcHHHHHHHHHhccCCCCCcccCHHHHHHH
Q 022053 198 EFTPLGRI---LYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVV 274 (303)
Q Consensus 198 ~l~~l~~i---~y~~~~~~~~~ehei~~vf~~~~d~~i~~~~~EV~~~~Wvs~eEL~~ll~~~~~~~~~~~ftPw~~~i~ 274 (303)
..++.+ .|.. ......+.+.++|.+..........+|+.+++|++++++.+++ +.+..+.++
T Consensus 76 --~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~-----------~~~~~~~~l 140 (148)
T 2azw_A 76 --CYLGEADEYFYSN--HRQTAYYNPGYFYVANTWRQLSEPLERTNTLHWVAPEEAVRLL-----------KRGSHRWAV 140 (148)
T ss_dssp --EEEEEEEEEEEET--TTTEEEEEEEEEEEEEEEEECSSCC-CCSEEEEECHHHHHHHB-----------SCHHHHHHH
T ss_pred --eEEEEEEEEEcCC--CCCcceEEEEEEEEEEcCcCCcCCCCceeeEEEeeHHHHHhhh-----------cchhHHHHH
Confidence 344433 2322 1111124556677766432222344788999999999998863 345566666
Q ss_pred HHHH
Q 022053 275 DNFL 278 (303)
Q Consensus 275 ~~~l 278 (303)
+.++
T Consensus 141 ~~~~ 144 (148)
T 2azw_A 141 EKWL 144 (148)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6554
No 22
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.75 E-value=1.2e-17 Score=136.02 Aligned_cols=126 Identities=17% Similarity=0.094 Sum_probs=90.6
Q ss_pred eeEEEEEEEEeCCCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCcee
Q 022053 121 LHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFT 200 (303)
Q Consensus 121 ~Hravsv~I~n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~l~ 200 (303)
.|+.+.++|++.+|++||+||+..+ .++|+|++| ||+++.||+ +++||+||+.||||+.+.. +.
T Consensus 7 ~~~~~~~~ii~~~~~vLl~~r~~~~-~~~g~w~lP-gG~ve~gE~---------~~~aa~RE~~EE~Gl~~~~-----~~ 70 (140)
T 2rrk_A 7 KMIEVVAAIIERDGKILLAQRPAQS-DQAGLWEFA-GGKVEPDES---------QRQALVRELREELGIEATV-----GE 70 (140)
T ss_dssp CEEEEEEEEEEETTEEEEEECCSSC-SCCCCEECC-EEECCTTSC---------HHHHHHHHHHHHSCEEEEC-----CE
T ss_pred ccceEEEEEEEcCCEEEEEEcCCCC-CCCCEEECC-ceecCCCCC---------HHHHHHHHHHHHHCCeeec-----cc
Confidence 3555666666778999999997654 479999998 999999999 8999999999999998763 24
Q ss_pred eeEEEEEEcCCCCCCcceEEEEEEEEEecCcCCCCccccccEEEEcHHHHHHHHHhccCCCCCcccCHHHHHHHHHHHH
Q 022053 201 PLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLF 279 (303)
Q Consensus 201 ~l~~i~y~~~~~~~~~ehei~~vf~~~~d~~i~~~~~EV~~~~Wvs~eEL~~ll~~~~~~~~~~~ftPw~~~i~~~~l~ 279 (303)
+++.+.+..+. .+...++|.+..... .++.+|+.+++|++++++.++ .+.|..+.+++.++.
T Consensus 71 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~e~~~~~W~~~~el~~~-----------~~~~~~~~~l~~~~~ 132 (140)
T 2rrk_A 71 YVASHQREVSG-----RIIHLHAWHVPDFHG-TLQAHEHQALVWCSPEEALQY-----------PLAPADIPLLEAFMA 132 (140)
T ss_dssp EEEEEEEEETT-----EEEEEEEEEESEEEE-CCCCSSCSCEEEECHHHHTTS-----------CCCTTHHHHHHHHHH
T ss_pred EEEEEEEecCC-----cEEEEEEEEEEeeCC-CcCCCccceeEEeCHHHHhhC-----------CCChhHHHHHHHHHH
Confidence 55655444331 133445565543211 234578899999999998653 466667777776654
No 23
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.75 E-value=1.7e-17 Score=137.23 Aligned_cols=128 Identities=12% Similarity=0.140 Sum_probs=91.4
Q ss_pred eEEEEEEEEeCCCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCceee
Q 022053 122 HRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTP 201 (303)
Q Consensus 122 Hravsv~I~n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~l~~ 201 (303)
+.++.+++ +.+|++||+||..... +|.|.+| ||++++||+ +.+||+||++||||+.+.. ..+
T Consensus 8 ~~~v~~ii-~~~~~vLl~~r~~~~~--~~~w~lP-gG~ve~gE~---------~~~aa~RE~~EEtGl~~~~-----~~~ 69 (153)
T 2b0v_A 8 NVTVAAVI-EQDDKYLLVEEIPRGT--AIKLNQP-AGHLEPGES---------IIQACSREVLEETGHSFLP-----EVL 69 (153)
T ss_dssp EEEEEEEC-EETTEEEEEEECSSSS--CCEEECS-EEECCTTSC---------HHHHHHHHHHHHHSEEEEE-----EEE
T ss_pred CEEEEEEE-eeCCEEEEEEEcCCCC--CCeEECC-CcCcCCCCC---------HHHHHHHHHHHhhCcEecc-----ceE
Confidence 33444444 4578999999986543 8999998 999999999 8999999999999999763 345
Q ss_pred eEEEEEEcCCCCCCcceEEEEEEEEEec--CcCCCCccccccEEEEcHHHHHHHHHhccCCCCCcccCHHHHHHHHHHH
Q 022053 202 LGRILYKAPSDGKWGEHELDYLLFIVRD--VSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFL 278 (303)
Q Consensus 202 l~~i~y~~~~~~~~~ehei~~vf~~~~d--~~i~~~~~EV~~~~Wvs~eEL~~ll~~~~~~~~~~~ftPw~~~i~~~~l 278 (303)
++.+.|..+.. ..+.+.++|.+... .....+++|+.+++|++++|+.++.. ..+.|.++.++..|+
T Consensus 70 ~~~~~~~~~~~---~~~~~~~~f~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~--------~~~~~~~~~~l~~~~ 137 (153)
T 2b0v_A 70 TGIYHWTCASN---GTTYLRFTFSGQVVSFDPDRKLDTGIVRAAWFSIDEIRAKQA--------MHRTPLVMQCIEDYH 137 (153)
T ss_dssp EEEEEEEETTT---TEEEEEEEEEEEEEEECTTSCCCTTEEEEEEEEHHHHHHTGG--------GBSSTHHHHHHHHHH
T ss_pred EEEEEEeCCCC---CcEEEEEEEEEEeCCCCCCCCCCCCeeeEEEecHHHHhhhhc--------ccCcHHHHHHHHHHH
Confidence 66655555431 12445556666542 22245568999999999999998722 256777777776664
No 24
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.75 E-value=1.8e-17 Score=138.90 Aligned_cols=112 Identities=23% Similarity=0.240 Sum_probs=75.0
Q ss_pred EEEEEEEE---------eCCCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccc
Q 022053 123 RAFSVFLF---------NSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAED 193 (303)
Q Consensus 123 ravsv~I~---------n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~ 193 (303)
||++++|| |+++++||.||+.. ||.|.+| ||++++||+ +.+||+||++||||+.+..
T Consensus 4 ra~G~iifr~~~~~~~~n~~~e~LL~~r~~~----~~~W~lP-gG~ve~gEt---------~~~aa~REl~EEtGl~~~~ 69 (155)
T 3u53_A 4 RACGLIIFRRCLIPKVDNNAIEFLLLQASDG----IHHWTPP-KGHVEPGED---------DLETALRETQEEAGIEAGQ 69 (155)
T ss_dssp CEEEEEEEEECCCSSSSSCSEEEEEEEESSS----SCCEECS-EEECCSSCC---------HHHHHHHHHHHHHCCCGGG
T ss_pred eEeEEEEEccccccceeCCCcEEEEEEecCC----CCCEECC-eeeccCCCC---------HHHHHHHHHHHHHCCcccc
Confidence 46677776 45668999999753 5889998 999999999 8999999999999999764
Q ss_pred CCCCceeeeEEEEEEcCCCCCCcceEEEEEEEEEe-c--CcCCCCccccccEEEEcHHHHHHHHH
Q 022053 194 VPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVR-D--VSVNPNPDEVAEYKYVNREQLKELLR 255 (303)
Q Consensus 194 ~~~~~l~~l~~i~y~~~~~~~~~ehei~~vf~~~~-d--~~i~~~~~EV~~~~Wvs~eEL~~ll~ 255 (303)
. ..++.+.+......... +...++|++.. + ..+.+ .+|+.+++|++++|+.+++.
T Consensus 70 ~-----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~E~~~~~W~~~~ea~~~~~ 127 (155)
T 3u53_A 70 L-----TIIEGFKRELNYVARNK-PKTVIYWLAEVKDYDVEIRL-SHEHQAYRWLGLEEACQLAQ 127 (155)
T ss_dssp E-----EEEEEEEEEEEEEETTE-EEEEEEEEEEESCTTCCCCC-CTTEEEEEEECHHHHHHHHC
T ss_pred c-----eeeeeEeeeeecCCCcc-eeEEEEEEEEEeccCCccCC-CcceeEEEEeEHHHHHHHcC
Confidence 2 22332211111001111 23333444443 2 23333 36899999999999988754
No 25
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.75 E-value=3.2e-17 Score=136.06 Aligned_cols=126 Identities=18% Similarity=0.283 Sum_probs=93.3
Q ss_pred eEEEEEEEEeCCCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCceee
Q 022053 122 HRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTP 201 (303)
Q Consensus 122 Hravsv~I~n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~l~~ 201 (303)
|.++.+++.+ +|++||+||. ...+|.|.+| ||+++.||+ +++||+||++||||+.+.. ..+
T Consensus 5 ~~~v~~ii~~-~~~vLl~~r~---~~~~~~w~~P-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~-----~~~ 65 (153)
T 3shd_A 5 HVTVACVVHA-EGKFLVVEET---INGKALWNQP-AGHLEADET---------LVEAAARELWEETGISAQP-----QHF 65 (153)
T ss_dssp EEEEEEEEEE-TTEEEEEEEE---ETTEEEEECS-EEECCTTCC---------HHHHHHHHHHHHHCCCCCC-----CEE
T ss_pred ceEEEEEEEe-CCEEEEEEec---CCCCCCEECC-eEEeCCCCC---------HHHHHHHHHHHHHCccccc-----CcE
Confidence 5556565554 7899999997 2357899998 999999999 8999999999999999763 245
Q ss_pred eEEEEEEcCCCCCCcceEEEEEEEEEecC--cCCCCccccccEEEEcHHHHHHHHHhccCCCCCcccCHHHHHHHHHHHH
Q 022053 202 LGRILYKAPSDGKWGEHELDYLLFIVRDV--SVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLF 279 (303)
Q Consensus 202 l~~i~y~~~~~~~~~ehei~~vf~~~~d~--~i~~~~~EV~~~~Wvs~eEL~~ll~~~~~~~~~~~ftPw~~~i~~~~l~ 279 (303)
++.+.|..+. ..+.+.++|.+.... ...++++|+.+++|++++++ .. .+....|..+..+..|+.
T Consensus 66 ~~~~~~~~~~----~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el----~~-----~~~~~~~~~~~~l~~~~~ 132 (153)
T 3shd_A 66 IRMHQWIAPD----KTPFLRFLFAIELEQICPTQPHDSDIDCCRWVSAEEI----LQ-----ASNLRSPLVAESIRCYQS 132 (153)
T ss_dssp EEEEEECCTT----SCCEEEEEEEEECSSCCCCCCCSTTCCEEEEECHHHH----HT-----CSCBSSTHHHHHHHHHHH
T ss_pred EEEEEEecCC----CceEEEEEEEEEccccCcCCCCcccceeeEEecHHHh----hc-----cccccCchHHHHHHHHHh
Confidence 6666565542 224566677776532 25667789999999999999 11 234677888877777754
No 26
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=99.74 E-value=2.1e-17 Score=140.58 Aligned_cols=116 Identities=18% Similarity=0.231 Sum_probs=81.8
Q ss_pred CceeE-EEEEEEEeCCCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCC
Q 022053 119 NLLHR-AFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVD 197 (303)
Q Consensus 119 gl~Hr-avsv~I~n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~ 197 (303)
...|+ ++++++++ +|++||.+|.... .++|.|++| ||++++||+ +++||+||++||||+ +.
T Consensus 30 ~~~~~~~v~vii~~-~~~vLL~~~~r~~-~~~~~w~lP-gG~ve~gEs---------~~~aa~REl~EEtGl-~~----- 91 (170)
T 1v8y_A 30 IVEHKPAVAVIALR-EGRMLFVRQMRPA-VGLAPLEIP-AGLIEPGED---------PLEAARRELAEQTGL-SG----- 91 (170)
T ss_dssp EEEECCEEEEEEEE-TTEEEEEECCBTT-TTBCCBBCS-EEECCTTCC---------HHHHHHHHHHHHHSE-EE-----
T ss_pred EEecCCeEEEEEEE-CCEEEEEEEEeCC-CCCCEEECC-ccccCCCCC---------HHHHHHHHHHHHHCC-Cc-----
Confidence 34454 88889999 8999998876443 578999998 999999999 899999999999999 65
Q ss_pred ceeeeEEEEEEcCCCCCCcceEEEEEEEEEe--cCcCCCCccccccEEEEcHHHHHHHHHhc
Q 022053 198 EFTPLGRILYKAPSDGKWGEHELDYLLFIVR--DVSVNPNPDEVAEYKYVNREQLKELLRKA 257 (303)
Q Consensus 198 ~l~~l~~i~y~~~~~~~~~ehei~~vf~~~~--d~~i~~~~~EV~~~~Wvs~eEL~~ll~~~ 257 (303)
.+.+++.+ |..+ +. .+...++|++.. .....++++|+.+++|++++++.+++..+
T Consensus 92 ~~~~l~~~-~~~~---~~-~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~ 148 (170)
T 1v8y_A 92 DLTYLFSY-FVSP---GF-TDEKTHVFLAENLKEVEAHPDEDEAIEVVWMRPEEALERHQRG 148 (170)
T ss_dssp EEEEEEEE-ESCT---TT-BCCEEEEEEEEEEEECC--------CEEEEECHHHHHHHHHTT
T ss_pred CceeeEEE-ecCC---Cc-cccEEEEEEEEeccccCCCCCCCceEEEEEEEHHHHHHHHHCC
Confidence 34566655 3222 11 134556666653 23445567899999999999999999874
No 27
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.74 E-value=1.3e-17 Score=139.13 Aligned_cols=118 Identities=23% Similarity=0.333 Sum_probs=83.2
Q ss_pred CCceeEEEEEEEEeCCCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCC
Q 022053 118 LNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVD 197 (303)
Q Consensus 118 ~gl~Hravsv~I~n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~ 197 (303)
.+.+|++++++|++.+|+|||+||.. +||.|++| ||+++.||+ +++||+||++|||||.+..+
T Consensus 10 ~~~~~~~v~~~i~~~~~~vLl~~r~~----~~g~w~~P-gG~ve~gE~---------~~~aa~RE~~EEtGl~~~~~--- 72 (165)
T 1f3y_A 10 PEGYRRNVGICLMNNDKKIFAASRLD----IPDAWQMP-QGGIDEGED---------PRNAAIRELREETGVTSAEV--- 72 (165)
T ss_dssp CSSCCCEEEEEEECTTSCEEEEEETT----EEEEEECC-EEECCTTCC---------HHHHHHHHHHHHHCCCSEEE---
T ss_pred ccceeeeEEEEEECCCCcEEEEecCC----CCCcEECC-eeccCCCCC---------HHHHHHHHHHHhhCCChhhh---
Confidence 57799999999999999999999973 57999998 899999999 89999999999999986421
Q ss_pred ceeeeEE--EEEEcCC----------CCCCcceEEEEEEEEEec---CcCCC-----CccccccEEEEcHHHHHHHHH
Q 022053 198 EFTPLGR--ILYKAPS----------DGKWGEHELDYLLFIVRD---VSVNP-----NPDEVAEYKYVNREQLKELLR 255 (303)
Q Consensus 198 ~l~~l~~--i~y~~~~----------~~~~~ehei~~vf~~~~d---~~i~~-----~~~EV~~~~Wvs~eEL~~ll~ 255 (303)
..... +.|..+. ...+. ++..++|++... ..+.+ +++|+.+++|++++|+.+++.
T Consensus 73 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~ 147 (165)
T 1f3y_A 73 --IAEVPYWLTYDFPPKVREKLNIQWGSDWK-GQAQKWFLFKFTGQDQEINLLGDGSEKPEFGEWSWVTPEQLIDLTV 147 (165)
T ss_dssp --EEECSSCCBCCCCHHHHHHHGGGSCSSCC-SCBEEEEEEEECSCGGGCCCCCCSSSCCSEEEEEEECHHHHHHHBC
T ss_pred --hcccccceeeecCcccccccccccccccc-CceEEEEEEEecCCcccccccCCCCCCChhheeEEecHHHHHHHhh
Confidence 11100 1111110 01111 123345555432 23333 367999999999999999754
No 28
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.74 E-value=2.4e-17 Score=138.67 Aligned_cols=127 Identities=18% Similarity=0.196 Sum_probs=93.3
Q ss_pred CCceeEEEEEEEEeCCCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCC
Q 022053 118 LNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVD 197 (303)
Q Consensus 118 ~gl~Hravsv~I~n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~ 197 (303)
....|.++.++|++ +|+|||+||.... ++|.|.+| ||+++.||+ +.+||+||++|||||.+...
T Consensus 25 ~~~~~~~v~~vi~~-~~~vLL~~r~~~~--~~~~w~lP-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~~--- 88 (157)
T 4dyw_A 25 TEQPRVGCGAAIVR-DGRILLIKRKRAP--EAGCWGLP-GGKVDWLEP---------VERAVCREIEEELGIALERA--- 88 (157)
T ss_dssp -CCCEEEEEEEEEE-TTEEEEEEECSSS--STTCEECC-EEECCTTCC---------HHHHHHHHHHHHHSCEEESC---
T ss_pred CCCceeEEEEEEEE-CCEEEEEEecCCC--CCCEEECC-cccCCCCCC---------HHHHHHHHHHHHHCcccccC---
Confidence 35578899999998 6999999998543 78999998 999999999 89999999999999998632
Q ss_pred ceeeeEEEEEEcCCCCCCcceEEEEEEEEEe-cCcC-CCCccccccEEEEcHHHHHHHHHhccCCCCCcccCHHHHHHHH
Q 022053 198 EFTPLGRILYKAPSDGKWGEHELDYLLFIVR-DVSV-NPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVD 275 (303)
Q Consensus 198 ~l~~l~~i~y~~~~~~~~~ehei~~vf~~~~-d~~i-~~~~~EV~~~~Wvs~eEL~~ll~~~~~~~~~~~ftPw~~~i~~ 275 (303)
.+++.+.+..... ..+.+.++|.+.. ...+ ..+++|+.+++|++++++.+ .++|..+.+++
T Consensus 89 --~~~~~~~~~~~~~---~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~~------------~l~~~~~~~l~ 151 (157)
T 4dyw_A 89 --TLLCVVDHIDAAN---GEHWVAPVYLAHAFSGEPRVVEPDRHEALGWFALDDLPQ------------PLTHATRIALE 151 (157)
T ss_dssp --EEEEEEEEEETTT---TEEEEEEEEEESEEESCCCCSCTTTEEEEEEEETTSCCS------------SBCHHHHHHHH
T ss_pred --cEEEEEEeeccCC---CcEEEEEEEEEEEcCCCcccCCCCcEeEEEEECHHHccc------------ccCHHHHHHHH
Confidence 3455554433211 2244556666653 2333 34567899999999999743 46777777776
Q ss_pred HH
Q 022053 276 NF 277 (303)
Q Consensus 276 ~~ 277 (303)
.|
T Consensus 152 ~l 153 (157)
T 4dyw_A 152 QV 153 (157)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 29
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.74 E-value=2.3e-17 Score=135.96 Aligned_cols=124 Identities=17% Similarity=0.108 Sum_probs=90.5
Q ss_pred eEEEEEEEEeCCCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCceee
Q 022053 122 HRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTP 201 (303)
Q Consensus 122 Hravsv~I~n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~l~~ 201 (303)
+..+.++|++.+|++||+||...+ .++|+|.+| ||+++.||+ +.+||+||+.||||+.+... .+
T Consensus 21 ~~~~~~~i~~~~~~vLl~~r~~~~-~~~g~w~~P-gG~ve~gE~---------~~~aa~RE~~EE~Gl~~~~~-----~~ 84 (153)
T 3ees_A 21 WIPVVAGFLRKDGKILVGQRPENN-SLAGQWEFP-GGKIENGET---------PEEALARELNEELGIEAEVG-----EL 84 (153)
T ss_dssp EEEEEEEEEEETTEEEEEECCTTS-TTTTCEECS-EEECCTTCC---------HHHHHHHHHHHHHSCEEECC-----CE
T ss_pred eEEEEEEEEEECCEEEEEEeCCCC-CCCCeEECC-ceeeCCCCC---------HHHHHHHHHHHHHCCccccC-----ce
Confidence 566667777778999999998764 589999998 999999999 89999999999999988643 24
Q ss_pred eEEEEEEcCCCCCCcceEEEEEEEEEecCcCCCCccccccEEEEcHHHHHHHHHhccCCCCCcccCHHHHHHHHHHH
Q 022053 202 LGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFL 278 (303)
Q Consensus 202 l~~i~y~~~~~~~~~ehei~~vf~~~~d~~i~~~~~EV~~~~Wvs~eEL~~ll~~~~~~~~~~~ftPw~~~i~~~~l 278 (303)
++.+.+..+. .+...++|.+.... ..++++|+.+++|++++++.++ .+.|..+.+++.++
T Consensus 85 ~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~~~~e~~~~~W~~~~el~~~-----------~~~~~~~~~l~~~~ 144 (153)
T 3ees_A 85 KLACTHSYGD-----VGILILFYEILYWK-GEPRAKHHMMLEWIHPEELKHR-----------NIPEANRKILHKIY 144 (153)
T ss_dssp EEEEEEEETT-----EEEEEEEEEECEEE-SCCCCSSSSEEEEECGGGGGGS-----------CCCHHHHTTHHHHH
T ss_pred EEEEEEecCC-----CeEEEEEEEEEECC-CCcCCCccceEEEecHHHhhhC-----------CCCcchHHHHHHHH
Confidence 4444443321 12334555554321 1355678999999999998653 56777777776664
No 30
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=99.73 E-value=3.4e-17 Score=143.00 Aligned_cols=135 Identities=16% Similarity=0.195 Sum_probs=87.1
Q ss_pred CCceeEEEEEEEEeCCC-eEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCC-cccCC
Q 022053 118 LNLLHRAFSVFLFNSKY-ELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGIC-AEDVP 195 (303)
Q Consensus 118 ~gl~Hravsv~I~n~~g-~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~-~~~~~ 195 (303)
....|.+++++|++.+| +|||+||. .+|.|.+| ||+++.||+ +.+||+||++|||||. +..+.
T Consensus 41 ~~~~h~~~~~vv~~~~~~~vLL~~r~-----~~g~w~lP-gG~ve~gEs---------~~eaa~REl~EEtGl~~~~~~~ 105 (197)
T 3fcm_A 41 NTIAHLTSSAFAVNKERNKFLMIHHN-----IYNSWAWT-GGHSDNEKD---------QLKVAIKELKEETGVKNPTPLL 105 (197)
T ss_dssp CSSEEEEEEEEEECTTSCEEEEEEET-----TTTEEECE-EEECTTCCB---------HHHHHHHHHHHHHCCSSCEESC
T ss_pred CCCccEEEEEEEEECCCCEEEEEEec-----CCCCEECC-ccccCCCCC---------HHHHHHHHHHHHHCCCcccccC
Confidence 35789999999999876 99999986 46899998 999999999 8999999999999998 43211
Q ss_pred CCceeeeEEEEEEcCCC--CCC--cc-eEEEEEEEEEe--cCcCCCCccccccEEEEcHHHHHHHHHhccCCCCCcccCH
Q 022053 196 VDEFTPLGRILYKAPSD--GKW--GE-HELDYLLFIVR--DVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSP 268 (303)
Q Consensus 196 ~~~l~~l~~i~y~~~~~--~~~--~e-hei~~vf~~~~--d~~i~~~~~EV~~~~Wvs~eEL~~ll~~~~~~~~~~~ftP 268 (303)
..+..+.. +..+.. .+. .. ..+..+|++.. ...+.++++|+.+++|++++++.+++. .|
T Consensus 106 -~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~-----------~~ 171 (197)
T 3fcm_A 106 -DKAFALDV--LTVNGHIKRGKYVSSHLHLNLTYLIECSEDETLMLKEDENSGVMWIPFNEISKYCS-----------EP 171 (197)
T ss_dssp -SSCSEEEE--EEECCEEETTEEECCEEEEEEEEEEECCTTSCCCCCC----CEEEEEGGGHHHHCC-----------CG
T ss_pred -CCceEEEE--eeecCccccCcccCCceeEEEEEEEEeCCCcccCCCcccccceEEccHHHHHhhcC-----------CH
Confidence 11111111 111110 000 01 11224454443 234567788999999999999998743 45
Q ss_pred HHHHHHHHHHHHH
Q 022053 269 WFRLVVDNFLFKW 281 (303)
Q Consensus 269 w~~~i~~~~l~~w 281 (303)
+++.+++.++...
T Consensus 172 ~~~~il~~~~~~l 184 (197)
T 3fcm_A 172 HMIPIYEKLINKL 184 (197)
T ss_dssp GGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 5566666665443
No 31
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=99.72 E-value=4.3e-17 Score=139.88 Aligned_cols=114 Identities=19% Similarity=0.150 Sum_probs=87.5
Q ss_pred EEEEEEEEeCCCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCceeee
Q 022053 123 RAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPL 202 (303)
Q Consensus 123 ravsv~I~n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~l~~l 202 (303)
.++.+++++.+|++||++|... ..++|.|++| ||++++||+ +++||+||++||||+.+.. +.++
T Consensus 42 ~~v~v~i~~~~~~vLL~~r~~~-~~~~~~w~~P-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~-----~~~l 105 (182)
T 2yvp_A 42 AASFVLPVTERGTALLVRQYRH-PTGKFLLEVP-AGKVDEGET---------PEAAARRELREEVGAEAET-----LIPL 105 (182)
T ss_dssp EEEEEEEBCTTSEEEEEEEEEG-GGTEEEEECC-EEECCTTCC---------HHHHHHHHHHHHHCEECSC-----EEEC
T ss_pred CEEEEEEEcCCCEEEEEEeccC-CCCCcEEEec-cccCCCCcC---------HHHHHHHHHHHHhCCCccc-----EEEE
Confidence 4888899999999999988754 3468999998 999999999 8999999999999998753 3445
Q ss_pred EEEEEEcCCCCCCcceEEEEEEEEEe---cCcCCCCccccccEEEEcHHHHHHHHHhc
Q 022053 203 GRILYKAPSDGKWGEHELDYLLFIVR---DVSVNPNPDEVAEYKYVNREQLKELLRKA 257 (303)
Q Consensus 203 ~~i~y~~~~~~~~~ehei~~vf~~~~---d~~i~~~~~EV~~~~Wvs~eEL~~ll~~~ 257 (303)
+.+ +..+ +. .+...++|++.. ...+.++++|+.+++|++++++.+++..+
T Consensus 106 ~~~-~~~~---~~-~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~ 158 (182)
T 2yvp_A 106 PSF-HPQP---SF-TAVVFHPFLALKARVVTPPTLEEGELLESLELPLTEVYALLAKG 158 (182)
T ss_dssp CCB-CSCT---TT-BCCEEEEEEECSCEECSCCCCCTTCCEEEEEEEHHHHHHHHHTT
T ss_pred EEE-eCCC---Cc-cccEEEEEEEeccccCCCCCCCCCceEEEEEEEHHHHHHHHHcC
Confidence 443 2111 11 245666777652 23455677899999999999999999864
No 32
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.72 E-value=4e-17 Score=135.58 Aligned_cols=114 Identities=19% Similarity=0.195 Sum_probs=76.8
Q ss_pred EEEEEEEEeCCCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCceeee
Q 022053 123 RAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPL 202 (303)
Q Consensus 123 ravsv~I~n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~l~~l 202 (303)
.++++++++.+|++||.++.... ..++.|.+| ||++++||+ +++||+||++||||+.+.. +.++
T Consensus 6 ~~v~vi~~~~~~~vLLv~~~r~~-~~~~~w~~P-gG~ve~gEt---------~~~aa~REl~EEtGl~~~~-----~~~l 69 (145)
T 2w4e_A 6 RAVFILPVTAQGEAVLIRQFRYP-LRATITEIV-AGGVEKGED---------LGAAAARELLEEVGGAASE-----WVPL 69 (145)
T ss_dssp EEEEEEEEETTSEEEEEEEEETT-TTEEEEECE-EEECCTTCC---------HHHHHHHHHHHHHCEECSE-----EEEC
T ss_pred CEEEEEEEcCCCEEEEEEEEecC-CCCCEEEeC-CccCCCCCC---------HHHHHHHHHHHhhCCccCe-----EEEE
Confidence 48888999999998775432211 245799998 999999999 8999999999999998753 3445
Q ss_pred EEEEEEcCCCCCCcceEEEEEEEEEe--cCcCCCCccccccEEEEcHHHHHHHHHhc
Q 022053 203 GRILYKAPSDGKWGEHELDYLLFIVR--DVSVNPNPDEVAEYKYVNREQLKELLRKA 257 (303)
Q Consensus 203 ~~i~y~~~~~~~~~ehei~~vf~~~~--d~~i~~~~~EV~~~~Wvs~eEL~~ll~~~ 257 (303)
+.+ |..+ +.. ++..++|++.. .....++++|+.+++|++++++.+++..+
T Consensus 70 ~~~-~~~~---~~~-~~~~~~f~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~~ 121 (145)
T 2w4e_A 70 PGF-YPQP---SIS-GVVFYPLLALGVTLGAAQLEDTETIERVVLPLAEVYRMLEAG 121 (145)
T ss_dssp CCB-BSCT---TTC-CCEEEEEEEEEEEEC--------CEEEEEEEHHHHHHHHHHT
T ss_pred ecC-cCCC---Ccc-CceEEEEEEEecccCCCCCCCCCeEEEEEEeHHHHHHHHHcC
Confidence 443 2221 111 34456666652 23445677899999999999999998874
No 33
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.72 E-value=4.1e-17 Score=135.71 Aligned_cols=125 Identities=10% Similarity=0.094 Sum_probs=86.5
Q ss_pred CceeEEEEEEEEeCCCe----EEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccC
Q 022053 119 NLLHRAFSVFLFNSKYE----LLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDV 194 (303)
Q Consensus 119 gl~Hravsv~I~n~~g~----lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~ 194 (303)
...|.++.++|++ +|+ |||++|...+ ++| |.+| ||++++||+ +.+||+||++||||+.+...
T Consensus 5 ~~~~~~~~~ii~~-~~~~~~~vLl~~r~~~~--~~g-w~lP-gG~ve~gE~---------~~~aa~RE~~EEtGl~~~~~ 70 (155)
T 2b06_A 5 QLTILTNICLIED-LETQRVVMQYRAPENNR--WSG-YAFP-GGHVENDEA---------FAESVIREIYEETGLTIQNP 70 (155)
T ss_dssp GCEEEEEEEEEEE-TTTTEEEEEEEC-------CCE-EECC-CCBCCTTSC---------HHHHHHHHHHHHHSEEEESC
T ss_pred cCcEEEEEEEEEE-CCCCeEEEEEEECCCCC--CCC-Eecc-ceecCCCCC---------HHHHHHHHHHHHhCccccCC
Confidence 4578888888887 456 9999998664 788 9997 999999999 89999999999999998632
Q ss_pred CCCceeeeEEEEEEcCCCCCCcceEEEEEEEEEecCcCCCCccccccEEEEcHHHHHHHHHhccCCCCCcccCHHHHHHH
Q 022053 195 PVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVV 274 (303)
Q Consensus 195 ~~~~l~~l~~i~y~~~~~~~~~ehei~~vf~~~~d~~i~~~~~EV~~~~Wvs~eEL~~ll~~~~~~~~~~~ftPw~~~i~ 274 (303)
.+++.+.+.... + .+.+.++|.+.... ..+++.|+.+++|++++++.++ .+.+.++.++
T Consensus 71 -----~~~~~~~~~~~~--~--~~~~~~~~~~~~~~-~~~~~~e~~~~~W~~~~el~~~-----------~~~~~~~~~l 129 (155)
T 2b06_A 71 -----QLVGIKNWPLDT--G--GRYIVICYKATEFS-GTLQSSEEGEVSWVQKDQIPNL-----------NLAYDMLPLM 129 (155)
T ss_dssp -----EEEEEEEEECTT--S--CEEEEEEEEECEEE-ECCCCBTTBEEEEEEGGGGGGS-----------CBCTTHHHHH
T ss_pred -----cEEEEEeeccCC--C--ceEEEEEEEEEecC-CCCCCCcceeeEEeeHHHhhhC-----------CCChhHHHHH
Confidence 455555554321 1 24455666654321 1234478899999999998764 3456667776
Q ss_pred HHHH
Q 022053 275 DNFL 278 (303)
Q Consensus 275 ~~~l 278 (303)
+.++
T Consensus 130 ~~~~ 133 (155)
T 2b06_A 130 EMME 133 (155)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6553
No 34
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.72 E-value=5.5e-17 Score=134.29 Aligned_cols=122 Identities=16% Similarity=0.144 Sum_probs=84.3
Q ss_pred EEEEEEE---eCCCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCcee
Q 022053 124 AFSVFLF---NSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFT 200 (303)
Q Consensus 124 avsv~I~---n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~l~ 200 (303)
++.++++ +.++++||+||.. +|.|.+| ||++++||+ +.+||+||++|||||.+... ..
T Consensus 7 ~v~vvi~~~~~~~~~vLl~~r~~-----~g~w~~P-gG~ve~gE~---------~~~aa~REl~EEtGl~~~~~----~~ 67 (149)
T 3son_A 7 QVLVIPFIKTEANYQFGVLHRTD-----ADVWQFV-AGGGEDEEA---------ISETAKRESIEELNLDVDVK----MY 67 (149)
T ss_dssp EEEEEEEEECSSSEEEEEEEESS-----SSCEECE-EEECCTTCC---------HHHHHHHHHHHHHTCCSCCC----EE
T ss_pred EEEEEEEEecCCCeEEEEEEEcC-----CCCEeCC-ccccCCCCC---------HHHHHHHHHHHHhCCCcccc----eE
Confidence 4555555 5667999999975 3999998 999999999 89999999999999998631 11
Q ss_pred eeEEE-EEE---cCCCCCCcceEEEEEEEEEec---CcCCCCccccccEEEEcHHHHHHHHHhccCCCCCcccCHHHHHH
Q 022053 201 PLGRI-LYK---APSDGKWGEHELDYLLFIVRD---VSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLV 273 (303)
Q Consensus 201 ~l~~i-~y~---~~~~~~~~ehei~~vf~~~~d---~~i~~~~~EV~~~~Wvs~eEL~~ll~~~~~~~~~~~ftPw~~~i 273 (303)
.+..+ .+. ....+ +.+...++|.+... ..+.+ ++|+.+++|++++++.++ .+.|..+.+
T Consensus 68 ~~~~~~~~~~~~~~~~~--~~~~~~~~f~~~~~~~~~~~~~-~~E~~~~~W~~~~el~~~-----------~~~~~~~~~ 133 (149)
T 3son_A 68 SLDSHASIPNFHFSFNK--PYVVPEYCFAIDLTSCSYQVTL-SLEHSELRWVSYESAIQL-----------LEWDSNKTA 133 (149)
T ss_dssp EEEEEEEEEGGGTCSSS--CSEEEEEEEEEECTTTGGGCCC-CTTEEEEEEECHHHHHHH-----------CCCHHHHHH
T ss_pred EEEeeecccceeeccCC--ceEeEEEEEEEEcCCCCCcccC-CCceeeEEEeCHHHHHHH-----------hcCHHHHHH
Confidence 12211 111 11111 12445567777654 35555 489999999999999876 345667777
Q ss_pred HHHHH
Q 022053 274 VDNFL 278 (303)
Q Consensus 274 ~~~~l 278 (303)
+..+.
T Consensus 134 l~~~~ 138 (149)
T 3son_A 134 LYELN 138 (149)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76553
No 35
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=99.71 E-value=4.4e-17 Score=146.12 Aligned_cols=144 Identities=11% Similarity=0.157 Sum_probs=92.4
Q ss_pred hhhhhccCCceeEEEEEEEEeCCCeEEEEEecCCCC--cCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhC
Q 022053 111 LMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKV--TFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELG 188 (303)
Q Consensus 111 ~~~~i~~~gl~Hravsv~I~n~~g~lLLqqRs~~K~--~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElG 188 (303)
.++.+...+.+|..+..+|++.+|++||+||...+. .++|.|.+.+|||+++||+.. ....+++||+||++||||
T Consensus 56 ~Rg~~e~d~~~~q~i~~~II~~~grvLl~~R~~~~~e~~~~g~w~~gPGGhVE~GEs~~---p~EtleeAa~REl~EEtG 132 (211)
T 3e57_A 56 ERDEAEYDETTKQVIPYVVIMDGDRVLITKRTTKQSEKRLHNLYSLGIGGHVREGDGAT---PREAFLKGLEREVNEEVD 132 (211)
T ss_dssp EHHHHTTCTTEEEEEEEEEEEETTEEEEEEC------------CBSSEECCCBGGGCSS---HHHHHHHHHHHHHHHHEE
T ss_pred EccccccCCcccceEEEEEEEECCEEEEEEECCCCCcccccCCcccccceEEeCCCCCC---chhhHHHHHHHHHHHHhC
Confidence 334454567788777777777789999999987652 378999994499999999810 001158999999999999
Q ss_pred CCcccCCCCceeeeEEEEEEcCCCCCCcceEEEEEEEEEecCcCCCCccccccEEEEcHHHHHHHHHhccCCCCCcccCH
Q 022053 189 ICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSP 268 (303)
Q Consensus 189 I~~~~~~~~~l~~l~~i~y~~~~~~~~~ehei~~vf~~~~d~~i~~~~~EV~~~~Wvs~eEL~~ll~~~~~~~~~~~ftP 268 (303)
|.+. .+.+++.+.+... ..+...+.++|.+... ...+...|+.+++|++++||.++.. .|-+
T Consensus 133 l~v~-----~~~~ig~~~~~~~---~~~~~~l~~~f~~~~~-~g~~~~~E~~~~~W~~~~eL~~~~~---------~le~ 194 (211)
T 3e57_A 133 VSLR-----ELEFLGLINSSTT---EVSRVHLGALFLGRGK-FFSVKEKDLFEWELIKLEELEKFSG---------VMEG 194 (211)
T ss_dssp EEEE-----EEEEEEEEECCSS---HHHHTEEEEEEEEEEE-EEEESCTTTCEEEEEEHHHHHHHGG---------GCCH
T ss_pred Ceee-----ccEEEEEEeccCC---CCCeEEEEEEEEEEeC-CceeCCCCeEEEEEEEHHHHHHhHh---------hccc
Confidence 9765 3456666544221 1122234456666542 2344567888999999999998743 4667
Q ss_pred HHHHHHH
Q 022053 269 WFRLVVD 275 (303)
Q Consensus 269 w~~~i~~ 275 (303)
|-+++++
T Consensus 195 wS~lvl~ 201 (211)
T 3e57_A 195 WSKISAA 201 (211)
T ss_dssp HHHHHHH
T ss_pred hhHHHHH
Confidence 8887765
No 36
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.70 E-value=9.5e-17 Score=134.67 Aligned_cols=129 Identities=18% Similarity=0.196 Sum_probs=90.1
Q ss_pred ceeEEEEEEEEeCCCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCce
Q 022053 120 LLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEF 199 (303)
Q Consensus 120 l~Hravsv~I~n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~l 199 (303)
..|.+++++|++ +|+|||+||.. +|.|.+| ||++++||+ +.+||+||++|||||.+.....-..
T Consensus 4 ~~~~~v~~vi~~-~~~vLL~~r~~-----~g~w~lP-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~~~~~~~ 67 (159)
T 3f6a_A 4 NRHFTVSVFIVC-KDKVLLHLHKK-----AKKMLPL-GGHIEVNEL---------PEEACIREAKEEAGLNVTLYNPIDI 67 (159)
T ss_dssp CSCEEEEEEEEE-TTEEEEEECSS-----SCCEECE-EEECCTTCC---------HHHHHHHHHHHHHCCCCEECCCCCH
T ss_pred cceEEEEEEEEE-CCEEEEEEcCC-----CCeEECC-ccCccCCCC---------HHHHHHHHHHHHhCCCceecccccc
Confidence 468899999998 68999999873 6899998 999999999 8999999999999998864321100
Q ss_pred -----------ee----eEEEEEEcCCCCCCcceEEEEEEEEEe-cCcCCCCccccccEEEEcHHHHHHHHHhccCCCCC
Q 022053 200 -----------TP----LGRILYKAPSDGKWGEHELDYLLFIVR-DVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEG 263 (303)
Q Consensus 200 -----------~~----l~~i~y~~~~~~~~~ehei~~vf~~~~-d~~i~~~~~EV~~~~Wvs~eEL~~ll~~~~~~~~~ 263 (303)
.. .....+..+ . ..+.+.++|.+.. ...+.++++|+.+++|++++++.++
T Consensus 68 ~~~~~~~~~~~~~~~~p~~~~~~~~~--~--~~~~~~~~f~~~~~~~~~~~~~~E~~~~~W~~~~el~~~---------- 133 (159)
T 3f6a_A 68 NLKKSCDLSGEKLLINPIHTILGDVS--P--NHSHIDFVYYATTTSFETSPEIGESKILKWYSKEDLKNA---------- 133 (159)
T ss_dssp HHHHHHHHTTCEEECCCSEEEEECSS--S--SSCEEEEEEEEECSCSCCCCCTTSCCCEEEECSSSSTTC----------
T ss_pred cccccccccccccccCccccccccCC--C--CceEEEEEEEEEeCCCCcCCCCCcccceEEeeHHHHhhC----------
Confidence 00 001111111 0 1234556677764 4556667789999999999998654
Q ss_pred cccCHHHHHHHHHHH
Q 022053 264 LKLSPWFRLVVDNFL 278 (303)
Q Consensus 264 ~~ftPw~~~i~~~~l 278 (303)
..+.+.++.+++.+.
T Consensus 134 ~~~~~~~~~l~~~~~ 148 (159)
T 3f6a_A 134 HNIQENILVMATEAL 148 (159)
T ss_dssp SSSCHHHHHHHHHHH
T ss_pred cCCChhHHHHHHHHH
Confidence 125566666666553
No 37
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.70 E-value=9.7e-17 Score=138.05 Aligned_cols=125 Identities=14% Similarity=0.138 Sum_probs=90.7
Q ss_pred eeEEEEEEEEeCCCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCcee
Q 022053 121 LHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFT 200 (303)
Q Consensus 121 ~Hravsv~I~n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~l~ 200 (303)
-|+++.+++++.+|++||+||... .++|.|.+| ||++++||+ +++||+||++|||||.+.. +.
T Consensus 23 ~~~~~~~~vi~~~~~vLL~~r~~~--~~~g~W~lP-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~-----~~ 85 (176)
T 3q93_A 23 ASRLYTLVLVLQPQRVLLGMKKRG--FGAGRWNGF-GGKVQEGET---------IEDGARRELQEESGLTVDA-----LH 85 (176)
T ss_dssp CEEEEEEEEEECSSEEEEEEECSS--TTTTSEECE-EEECCTTSC---------HHHHHHHHHHHHHSCEESC-----CE
T ss_pred CCcEEEEEEEEeCCEEEEEEEcCC--CCCCeEECc-eecCCCCCC---------HHHHHHHHHHHHHCCccee-----eE
Confidence 466777777788899999999643 479999998 999999999 8999999999999999863 35
Q ss_pred eeEEEEEEcCCCCCCcceEEEEEEEEEe-cCcCCCCccccccEEEEcHHHHHHHHHhccCCCCCcccCHHHHHHHHHHH
Q 022053 201 PLGRILYKAPSDGKWGEHELDYLLFIVR-DVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFL 278 (303)
Q Consensus 201 ~l~~i~y~~~~~~~~~ehei~~vf~~~~-d~~i~~~~~EV~~~~Wvs~eEL~~ll~~~~~~~~~~~ftPw~~~i~~~~l 278 (303)
+++.+.|..+... .+...++|.+.. ...+ .+.|..+++|+++++|.++ .+.|..+.++..++
T Consensus 86 ~l~~~~~~~~~~~---~~~~~~~f~~~~~~~~~--~~~e~~~~~W~~~~el~~~-----------~~~~~~~~~l~~~~ 148 (176)
T 3q93_A 86 KVGQIVFEFVGEP---ELMDVHVFCTDSIQGTP--VESDEMRPCWFQLDQIPFK-----------DMWPDDSYWFPLLL 148 (176)
T ss_dssp EEEEEEEEETTCS---CEEEEEEEEESCEESCC--CCCSSEEEEEEETTCCCGG-----------GBCTTHHHHHHHHH
T ss_pred EEEEEEEEcCCCC---cEEEEEEEEEECCCCCc--CCCcceeeEEeeHHHcccc-----------ccCcchHHHHHHHH
Confidence 6777666544221 244556666653 3333 3457778899999998653 45555566665553
No 38
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.70 E-value=1.2e-17 Score=139.30 Aligned_cols=111 Identities=16% Similarity=0.133 Sum_probs=82.9
Q ss_pred CceeEEEEEEEEeCCCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCc
Q 022053 119 NLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDE 198 (303)
Q Consensus 119 gl~Hravsv~I~n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~ 198 (303)
...++++.+++++.+|+|||+||... .++|.|.+| ||+++.||+ +++||+||++||||+.+..
T Consensus 17 ~~~~~~v~~~i~~~~~~vLl~~r~~~--~~~~~w~~P-gG~ve~gE~---------~~~aa~REl~EEtGl~~~~----- 79 (156)
T 3gg6_A 17 KNVCYVVLAVFLSEQDEVLLIQEAKR--ECRGSWYLP-AGRMEPGET---------IVEALQREVKEEAGLHCEP----- 79 (156)
T ss_dssp TTCEEEEEEECBCTTSEEEEEECCCT--TSTTCEECS-EEECCTTCC---------HHHHHHHHHHHHHCEEEEE-----
T ss_pred CceEEEEEEEEEeCCCEEEEEEecCC--CCCCEEECC-eeeccCCCC---------HHHHHHHHHHHhhCceeEe-----
Confidence 44677888888999999999999843 379999998 999999999 8999999999999998763
Q ss_pred eeeeEEEEEEcCCCCCCcceEEEEEEEEEe-cCcCC---CCccccccEEEEcHHHHHHHH
Q 022053 199 FTPLGRILYKAPSDGKWGEHELDYLLFIVR-DVSVN---PNPDEVAEYKYVNREQLKELL 254 (303)
Q Consensus 199 l~~l~~i~y~~~~~~~~~ehei~~vf~~~~-d~~i~---~~~~EV~~~~Wvs~eEL~~ll 254 (303)
..+++.+. .. .+.+.++|.+.. ...+. .+.+|+.+++|+++++|.+++
T Consensus 80 ~~~~~~~~--~~------~~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~ 131 (156)
T 3gg6_A 80 ETLLSVEE--RG------PSWVRFVFLARPTGGILKTSKEADAESLQAAWYPRTSLPTPL 131 (156)
T ss_dssp EEEEEEEE--SS------TTEEEEEEEEEEEEECCCCGGGCSSSCSEEEEEETTSCCSSB
T ss_pred eeEEEEEc--CC------CCEEEEEEEEEeeCCeeccCCCCCcceeeeEEEcHHHCcccc
Confidence 23454432 11 133455666653 22222 345799999999999987643
No 39
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=99.70 E-value=1.8e-16 Score=134.95 Aligned_cols=115 Identities=17% Similarity=0.194 Sum_probs=84.0
Q ss_pred CceeEEEEEEEEeCCCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCc
Q 022053 119 NLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDE 198 (303)
Q Consensus 119 gl~Hravsv~I~n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~ 198 (303)
..+|.++++++++.+|++||++|.. +|.|.+| ||+++.||+ +.+||+||++|||||.+..
T Consensus 5 ~~~~~~v~~~i~~~~~~vLl~~r~~-----~~~w~~p-~G~~e~gE~---------~~~aa~RE~~EE~G~~~~~----- 64 (164)
T 2kdv_A 5 DGYRPNVGIVICNRQGQVMWARRFG-----QHSWQFP-QGGINPGES---------AEQAMYRELFEEVGLSRKD----- 64 (164)
T ss_dssp SSEEEEEEEEEECTTSEEEEEEETT-----CCCEECC-EEECCTTCC---------HHHHHHHHHHHHHCCCGGG-----
T ss_pred CCCCcEEEEEEEccCCEEEEEEEcC-----CCeEECC-eeecCCCCC---------HHHHHHHHHHHHHCCCccc-----
Confidence 4589999999999999999999974 6899998 999999999 8999999999999999763
Q ss_pred eeeeEEE----EEEcCCCC------CCcceEEEEEEEEEec---CcCCCC---ccccccEEEEcHHHHHHH
Q 022053 199 FTPLGRI----LYKAPSDG------KWGEHELDYLLFIVRD---VSVNPN---PDEVAEYKYVNREQLKEL 253 (303)
Q Consensus 199 l~~l~~i----~y~~~~~~------~~~ehei~~vf~~~~d---~~i~~~---~~EV~~~~Wvs~eEL~~l 253 (303)
+.+++.+ .|..+... ....+...++|.+... ..+.++ .+|+.+++|++++++.+.
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~~~~E~~~~~W~~~~e~~~~ 135 (164)
T 2kdv_A 65 VRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQ 135 (164)
T ss_dssp EEEEEECSSCEEEECCTTTCCTTSSSCCCEEEEEEEEEEESSCGGGCCSCSSSSCSEEEEEEEETTTGGGG
T ss_pred eEEEEEecceeEEecCcceeeeccCcccccceeEEEEEEecCCccccccCCCCCchhceEEEecHHHhhhh
Confidence 2344442 35544321 1112344566666642 234443 359999999999987553
No 40
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.69 E-value=8.3e-17 Score=139.65 Aligned_cols=114 Identities=18% Similarity=-0.021 Sum_probs=79.9
Q ss_pred CceeEEEEEEEEeCCC--eEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCC
Q 022053 119 NLLHRAFSVFLFNSKY--ELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPV 196 (303)
Q Consensus 119 gl~Hravsv~I~n~~g--~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~ 196 (303)
+..|.++.+++ +.+| +|||+||+..+..++|.|++| ||+++.||+ +++||+||++|||||.+..
T Consensus 32 ~~~~~~~~v~i-~~~~~~~vLL~~r~~~~~~~~g~w~lP-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~--- 97 (194)
T 1nqz_A 32 HYRRAAVLVAL-TREADPRVLLTVRSSELPTHKGQIAFP-GGSLDAGET---------PTQAALREAQEEVALDPAA--- 97 (194)
T ss_dssp -CEEEEEEEEE-ESSSSCBBCEEEEC------CCCEECS-EEECCTTCC---------HHHHHHHHHHHHHCCCGGG---
T ss_pred CCceEEEEEEE-ecCCCeEEEEEEecCCCCCCCCeEECC-cccCCCCCC---------HHHHHHHHHHHHHCCCccc---
Confidence 54555555555 7777 899999987766789999998 999999999 8999999999999998763
Q ss_pred CceeeeEEEEEEcCCCCCCcceEEEEEEEEEec--Cc-CCCCccccccEEEEcHHHH-HHH
Q 022053 197 DEFTPLGRILYKAPSDGKWGEHELDYLLFIVRD--VS-VNPNPDEVAEYKYVNREQL-KEL 253 (303)
Q Consensus 197 ~~l~~l~~i~y~~~~~~~~~ehei~~vf~~~~d--~~-i~~~~~EV~~~~Wvs~eEL-~~l 253 (303)
+.+++.+.+.... .+...++|++... .. ..++++|+.+++|++++|+ .+.
T Consensus 98 --~~~l~~~~~~~~~-----~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~ 151 (194)
T 1nqz_A 98 --VTLLGELDDVFTP-----VGFHVTPVLGRIAPEALDTLRVTPEVAQIITPTLAELRAVP 151 (194)
T ss_dssp --CEEEEECCCEEET-----TTEEEEEEEEEECGGGGGGCCCCTTEEEEECCBHHHHHHSC
T ss_pred --eEEEEEccCccCC-----CCeEEEEEEEEecCCccccCCCccceeEEEEEEHHHhccCC
Confidence 3455554332211 1344566766653 23 5567789999999999999 654
No 41
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.68 E-value=9.4e-17 Score=138.91 Aligned_cols=138 Identities=16% Similarity=0.113 Sum_probs=92.3
Q ss_pred CceeEEEEEEEEe--C-----CCeEEEEEecC-----CCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHH
Q 022053 119 NLLHRAFSVFLFN--S-----KYELLLQQRSG-----TKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDE 186 (303)
Q Consensus 119 gl~Hravsv~I~n--~-----~g~lLLqqRs~-----~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EE 186 (303)
...|.++.++|+. . +++|||+||+. .+..++|.|.+| ||++++||+ +++||+||++||
T Consensus 24 ~p~~~~v~~vv~~~~~~~~~~~~~vLL~~r~~~~~~g~~~~~~g~w~lP-GG~ve~gEs---------~~~aa~REl~EE 93 (187)
T 3i9x_A 24 TPDGYTSDMILTTVKELNGKPTLHILLIKRSLTNAEGKPNMEGGKWAVP-GGFVDENES---------AEQAAERELEEE 93 (187)
T ss_dssp CCSEEEEEEEEEEEEEETTEEEEEEEEEECCSBCTTSSBCTTTTCEECS-EEECCTTSC---------HHHHHHHHHHHH
T ss_pred CcccceEEEEEEEEcCCCCCCCCEEEEEEEccccccccCCCCCCEEECC-ceeCCCCCC---------HHHHHHHHHHHH
Confidence 4466777776654 2 36899999965 345689999998 999999999 899999999999
Q ss_pred hCCCcccCCCCceeeeEEEEEEcCCCCCCcceEEEEEEEEEecC---cCCCCccccccEEEEcHHHHHHHHHhccCCCCC
Q 022053 187 LGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDV---SVNPNPDEVAEYKYVNREQLKELLRKADAGEEG 263 (303)
Q Consensus 187 lGI~~~~~~~~~l~~l~~i~y~~~~~~~~~ehei~~vf~~~~d~---~i~~~~~EV~~~~Wvs~eEL~~ll~~~~~~~~~ 263 (303)
|||.+.. +.+++.+ ..+..... .+.+..+|++.... ......+|+.+++|++++++.++
T Consensus 94 tGl~~~~-----~~~l~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~---------- 155 (187)
T 3i9x_A 94 TSLTDIP-----LIPFGVF--DKPGRDPR-GWIISRAFYAIVPPEALEKRAAGDDAAEIGLFPMTEALEL---------- 155 (187)
T ss_dssp HCCCSCC-----CEEEEEE--CCTTSSTT-SSEEEEEEEEECCHHHHHHHHHSTTTTTEEEEEHHHHTTS----------
T ss_pred HCCCCcc-----eEEEEEE--cCCccCCC-CCEEEEEEEEEEcCcccCCcCCCCceeEEEEEeHHHcccC----------
Confidence 9998753 3455553 33321111 13344444443321 11234578999999999998643
Q ss_pred cccCHHHHHHHHHHHHHHHHHh
Q 022053 264 LKLSPWFRLVVDNFLFKWWDHL 285 (303)
Q Consensus 264 ~~ftPw~~~i~~~~l~~ww~~~ 285 (303)
.+.+..+.++..++..--..+
T Consensus 156 -~l~~~~~~il~~a~~~l~~~~ 176 (187)
T 3i9x_A 156 -PLAFDHLDMLKKAFSAITEEF 176 (187)
T ss_dssp -CBSTTHHHHHHHHHHHHHHHH
T ss_pred -CCCccHHHHHHHHHHHHHhhh
Confidence 456667777776655444443
No 42
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.67 E-value=2e-16 Score=134.07 Aligned_cols=123 Identities=14% Similarity=0.141 Sum_probs=82.4
Q ss_pred CceeEEEEEEEEeCCCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCc
Q 022053 119 NLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDE 198 (303)
Q Consensus 119 gl~Hravsv~I~n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~ 198 (303)
...+.++.++|++ +|+|||+||... +|.|.+| ||++++||+ +++||+||++|||||.+...
T Consensus 20 ~~~~~~v~~ii~~-~~~vLL~~r~~~----~~~w~~P-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~~---- 80 (171)
T 3id9_A 20 NIMQVRVTGILIE-DEKVLLVKQKVA----NRDWSLP-GGRVENGET---------LEEAMIREMREETGLEVKIK---- 80 (171)
T ss_dssp --CEEEEEEEEEE-TTEEEEEECSST----TCCEECC-EEECCTTCC---------HHHHHHHHHHHHHCCCEEEE----
T ss_pred CceEEEEEEEEEE-CCEEEEEEEECC----CCeEECC-CccCCCCCC---------HHHHHHHHHHHHHCCccccc----
Confidence 5577788888887 589999999753 7999998 999999999 89999999999999997522
Q ss_pred eeeeEEEEEEcCCCCCCcceEEEEEEEEEe-cCcCC-----CCccccccEEEEcHHHHHHHHHhccCCCCCcccCHHHHH
Q 022053 199 FTPLGRILYKAPSDGKWGEHELDYLLFIVR-DVSVN-----PNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRL 272 (303)
Q Consensus 199 l~~l~~i~y~~~~~~~~~ehei~~vf~~~~-d~~i~-----~~~~EV~~~~Wvs~eEL~~ll~~~~~~~~~~~ftPw~~~ 272 (303)
..++.+.+... . .+...++|.+.. ...+. ++++|+.+++|++++|+.++ .+.|.++.
T Consensus 81 -~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~-----------~~~~~~~~ 143 (171)
T 3id9_A 81 -KLLYVCDKPDA--S---PSLLHITFLLERIEGEITLPSNEFDHNPIHDVQMVPINELSYY-----------GFSETFIN 143 (171)
T ss_dssp -EEEEEEEETTS--S---SCEEEEEEEEEEC-------------CCCCCEEEEETGGGGGG-----------TCCTTCSH
T ss_pred -eEEEEEcccCC--C---CcEEEEEEEEEEcCCcccCCccCCCcCeeeeEEEEeHHHHhhC-----------CCCHHHHH
Confidence 33444333211 1 123333444443 22222 35689999999999999764 35555555
Q ss_pred HHHHH
Q 022053 273 VVDNF 277 (303)
Q Consensus 273 i~~~~ 277 (303)
+++++
T Consensus 144 ~l~~~ 148 (171)
T 3id9_A 144 LISGG 148 (171)
T ss_dssp HHHHG
T ss_pred HHHHh
Confidence 55554
No 43
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.67 E-value=1.5e-17 Score=133.36 Aligned_cols=123 Identities=17% Similarity=0.221 Sum_probs=83.7
Q ss_pred eeEEEEEEEEeCCCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCcee
Q 022053 121 LHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFT 200 (303)
Q Consensus 121 ~Hravsv~I~n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~l~ 200 (303)
.|.++. +|++.+|++||+||...+ .++|+|++| ||++++||+ +.+||+||++||||+.+... .
T Consensus 4 ~~~~~~-ii~~~~~~vLl~~r~~~~-~~~g~w~~P-gG~~e~gE~---------~~~aa~RE~~EE~G~~~~~~-----~ 66 (129)
T 1mut_A 4 LQIAVG-IIRNENNEIFITRRAADA-HMANKLEFP-GGKIEMGET---------PEQAVVRELQEEVGITPQHF-----S 66 (129)
T ss_dssp EECCCE-ECEETTTEEEEEECSSCC-SSSCCEECC-CCCSSSCSS---------TTHHHHHHHHTTTCCSSCEE-----C
T ss_pred EEEEEE-EEEecCCEEEEEEeCCCC-CCCCeEECC-ccCcCCCCC---------HHHHHHHHHHHHhCCccccc-----e
Confidence 344444 445778999999998765 689999998 999999999 79999999999999987632 2
Q ss_pred eeEEEEEEcCCCCCCcceEEEEEEEEEecCcCCCCccccccEEEEcHHHHHHHHHhccCCCCCcccCHHHHHHHHHH
Q 022053 201 PLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNF 277 (303)
Q Consensus 201 ~l~~i~y~~~~~~~~~ehei~~vf~~~~d~~i~~~~~EV~~~~Wvs~eEL~~ll~~~~~~~~~~~ftPw~~~i~~~~ 277 (303)
+++.+.+..+ ..+...++|.+.... ..++++|+.+++|++++++.++ .+.|..+.+++.+
T Consensus 67 ~~~~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~~e~~~~~W~~~~el~~~-----------~~~~~~~~~l~~l 126 (129)
T 1mut_A 67 LFEKLEYEFP-----DRHITLWFWLVERWE-GEPWGKEGQPGEWMSLVGLNAD-----------DFPPANEPVIAKL 126 (129)
T ss_dssp CCCCCBCCCS-----SCEEECCCEEEEECS-SCCCCCSSCCCEEEESSSCCTT-----------TSCTTCHHHHHHH
T ss_pred EEEEEEEecC-----CceEEEEEEEEEccC-CccCCcccceeEEeCHHHcccc-----------cCCchhHHHHHHH
Confidence 3333322211 112233456555422 1344678899999999998653 4555556555543
No 44
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.66 E-value=8.3e-16 Score=125.74 Aligned_cols=108 Identities=16% Similarity=0.116 Sum_probs=78.5
Q ss_pred eeEEEEEEEEe--CCCe--EEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCC
Q 022053 121 LHRAFSVFLFN--SKYE--LLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPV 196 (303)
Q Consensus 121 ~Hravsv~I~n--~~g~--lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~ 196 (303)
.+.+++++|++ .+|+ +||+||... |+.|.+| ||++++||+ +++||+||++||||+.+..
T Consensus 8 p~~~v~~vi~~~~~~~~~~vLl~~r~~~----~~~w~~P-gG~ve~gE~---------~~~aa~RE~~EEtGl~~~~--- 70 (139)
T 2yyh_A 8 PLLATDVIIRLWDGENFKGIVLIERKYP----PVGLALP-GGFVEVGER---------VEEAAAREMREETGLEVRL--- 70 (139)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEEEECSS----SCSEECC-EEECCTTCC---------HHHHHHHHHHHHHCCCCEE---
T ss_pred CeEEEEEEEEEEcCCCcEEEEEEEecCC----CCcEECc-cccCCCCCC---------HHHHHHHHHHHHHCCCccc---
Confidence 45667777766 6788 999999753 5669998 999999999 8999999999999998763
Q ss_pred CceeeeEEEEEEcCCCCCCcceEEEEEEEEEecCcCCCCccccccEEEEcHHHHH
Q 022053 197 DEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLK 251 (303)
Q Consensus 197 ~~l~~l~~i~y~~~~~~~~~ehei~~vf~~~~d~~i~~~~~EV~~~~Wvs~eEL~ 251 (303)
..+++.+ ..+.... ..+.+.++|.+.....+. .++|+.+++|++++++.
T Consensus 71 --~~~~~~~--~~~~~~~-~~~~~~~~f~~~~~~~~~-~~~e~~~~~W~~~~el~ 119 (139)
T 2yyh_A 71 --HKLMGVY--SDPERDP-RAHVVSVVWIGDAQGEPK-AGSDAKKVKVYRLEEIP 119 (139)
T ss_dssp --EEEEEEE--CCTTSCT-TSCEEEEEEEEEEESCCC-CCTTEEEEEEECTTSCC
T ss_pred --ceEEEEE--CCCCcCC-CceEEEEEEEEecCCccC-CCCCcceEEEEEHHHCC
Confidence 2344433 3332211 125666777776544444 45789999999999986
No 45
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=99.66 E-value=4.1e-16 Score=128.37 Aligned_cols=108 Identities=15% Similarity=0.245 Sum_probs=75.8
Q ss_pred EEEEEEEEeCC-CeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCceee
Q 022053 123 RAFSVFLFNSK-YELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTP 201 (303)
Q Consensus 123 ravsv~I~n~~-g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~l~~ 201 (303)
++++++|++.+ |+|||+||.. +|.|.+| ||++++||+ +.+||+||++||||+.+..+ ..
T Consensus 5 ~~~~~~i~~~~~~~vLl~~r~~-----~g~w~~P-gG~ve~gEs---------~~~aa~RE~~EEtGl~~~~~-----~~ 64 (146)
T 2jvb_A 5 PVRGAAIFNENLSKILLVQGTE-----SDSWSFP-RGKISKDEN---------DIDCCIREVKEEIGFDLTDY-----ID 64 (146)
T ss_dssp CCEEEEEBCTTSSEEEEECCSS-----SSCCBCC-EECCCSSSC---------HHHHHHHHHHHHTSCCCSSS-----SC
T ss_pred EEEEEEEEeCCCCEEEEEEEcC-----CCcEECC-cccCCCCCC---------HHHHHHHHHHHHHCCCchHh-----cc
Confidence 45677888876 8999998763 5899998 999999999 89999999999999987642 11
Q ss_pred eEEEEEEcCCCCCCcceEEEEEEEEEe-c--CcCCC-CccccccEEEEcHHHHHHHHHh
Q 022053 202 LGRILYKAPSDGKWGEHELDYLLFIVR-D--VSVNP-NPDEVAEYKYVNREQLKELLRK 256 (303)
Q Consensus 202 l~~i~y~~~~~~~~~ehei~~vf~~~~-d--~~i~~-~~~EV~~~~Wvs~eEL~~ll~~ 256 (303)
+..+.+... . + ...++|++.. . ....+ +.+|+.+++|++++++.+++..
T Consensus 65 ~~~~~~~~~-~---~--~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~ 117 (146)
T 2jvb_A 65 DNQFIERNI-Q---G--KNYKIFLISGVSEVFNFKPQVRNEIDKIEWFDFKKISKTMYK 117 (146)
T ss_dssp SSCEEEEEE-T---T--EEEEEEEECCCCSSSCCCCCCSSSCCCEEEEEHHHHHTGGGC
T ss_pred ccccccccc-C---C--ceEEEEEEEeccccccCCcCCcchhheeEEeEHHHHHhhhcc
Confidence 222222111 1 1 2234444432 1 12333 3679999999999999998765
No 46
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.66 E-value=2.1e-16 Score=131.46 Aligned_cols=111 Identities=12% Similarity=0.153 Sum_probs=79.6
Q ss_pred CceeEEEEEEEEeCCCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCc
Q 022053 119 NLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDE 198 (303)
Q Consensus 119 gl~Hravsv~I~n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~ 198 (303)
..+|.+++++|++ +|+|||+|| +|.|.+| ||++++||+ +.+||+||++||||+.+...
T Consensus 16 ~~~~~~~~~ii~~-~~~vLl~~r-------~~~w~lP-gG~ve~gE~---------~~~aa~REl~EEtGl~~~~~---- 73 (154)
T 2pqv_A 16 TVFGVRATALIVQ-NHKLLVTKD-------KGKYYTI-GGAIQVNES---------TEDAVVREVKEELGVKAQAG---- 73 (154)
T ss_dssp EEEEEEEEECCEE-TTEEEEEEE-------TTEEECE-EEECBTTCC---------HHHHHHHHHHHHHCCCEEEE----
T ss_pred ceEeEEEEEEEEE-CCEEEEEec-------CCeEECc-ccCcCCCCC---------HHHHHHHHHHHHhCCeeeec----
Confidence 4578888888887 689999999 6899998 999999999 89999999999999997632
Q ss_pred eeeeEEEEEEcCCCCCCcceEEEEEEEEEecCc-CC--CCccccccEEEEcHHHHHHH
Q 022053 199 FTPLGRILYKAPSDGKWGEHELDYLLFIVRDVS-VN--PNPDEVAEYKYVNREQLKEL 253 (303)
Q Consensus 199 l~~l~~i~y~~~~~~~~~ehei~~vf~~~~d~~-i~--~~~~EV~~~~Wvs~eEL~~l 253 (303)
.+++.+.+..+.. +...+.+.++|.+..... .. ..++|+.+++|++++++.++
T Consensus 74 -~~~~~~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~ 129 (154)
T 2pqv_A 74 -QLAFVVENRFEVD-GVSYHNIEFHYLVDLLEDAPLTMQEDEKRQPCEWIDLDKLQNI 129 (154)
T ss_dssp -EEEEEEEEEEEET-TEEEEEEEEEEEEEESSCCCSEEEETTEEEEEEEEEGGGGGGS
T ss_pred -eEEEEEeeeecCC-CCcceEEEEEEEEEecCCCCcccCCCCceeeEEEeEHHHHhhc
Confidence 2333333222211 222245666777765322 11 23467899999999999764
No 47
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=99.65 E-value=6.4e-16 Score=129.04 Aligned_cols=114 Identities=14% Similarity=0.131 Sum_probs=78.9
Q ss_pred CCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHH-HHHHHHHHHHhC-CCcccCCCCceeeeEEEEEEcC
Q 022053 133 KYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVR-NAAQRKLLDELG-ICAEDVPVDEFTPLGRILYKAP 210 (303)
Q Consensus 133 ~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~-eAA~REL~EElG-I~~~~~~~~~l~~l~~i~y~~~ 210 (303)
+|++||+||... ..++|+|++| ||+++.||+ +. +||+||+.|||| +.+.. +.+++.+.+..+
T Consensus 33 ~~~vLl~~R~~~-~~~~g~w~~P-gG~~e~gE~---------~~~~a~~REl~EE~g~l~~~~-----~~~l~~~~~~~~ 96 (155)
T 1x51_A 33 GAQILLVQRPNS-GLLAGLWEFP-SVTWEPSEQ---------LQRKALLQELQRWAGPLPATH-----LRHLGEVVHTFS 96 (155)
T ss_dssp SEEEEEEECCCC-STTCSCEECC-EEECCSSHH---------HHHHHHHHHHHHHSCCCCSTT-----CEECCCBCCBCS
T ss_pred CCEEEEEECCCC-CCCCceecCC-ccccCCCCC---------HHHHHHHHHHHHHhCCcceee-----eeecceEEEecC
Confidence 589999999864 4689999998 999999999 75 999999999999 77642 223333322211
Q ss_pred CCCCCcceEEEEEEEEEecCcCCCCccccccEEEEcHHHHHHHHHhccCCCCCcccCHHHHHHHHHHHH
Q 022053 211 SDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLF 279 (303)
Q Consensus 211 ~~~~~~ehei~~vf~~~~d~~i~~~~~EV~~~~Wvs~eEL~~ll~~~~~~~~~~~ftPw~~~i~~~~l~ 279 (303)
. .+...++|.+..... .+...|..+++|++++++.++ .|.+.++.+++.++.
T Consensus 97 ~-----~~~~~~~~~~~~~~~-~~~~~e~~~~~W~~~~el~~~-----------~~~~~~~~~l~~~~~ 148 (155)
T 1x51_A 97 H-----IKLTYQVYGLALEGQ-TPVTTVPPGARWLTQEEFHTA-----------AVSTAMKKVFRVYQG 148 (155)
T ss_dssp S-----CEEEEEEEEEECSSC-CCCCCCCTTEEEEEHHHHHHS-----------CCCHHHHHHHHHHHH
T ss_pred C-----ccEEEEEEEEEEcCC-CCCCCCCCccEEccHHHhhhc-----------CCCHHHHHHHHHHHh
Confidence 0 122334565554321 233457889999999999763 567777777776654
No 48
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.65 E-value=4e-15 Score=130.18 Aligned_cols=111 Identities=17% Similarity=0.268 Sum_probs=75.5
Q ss_pred eEEEEEEEEeC-CCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCcee
Q 022053 122 HRAFSVFLFNS-KYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFT 200 (303)
Q Consensus 122 Hravsv~I~n~-~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~l~ 200 (303)
+.++.+++++. +++|||+||.. .++|.|.+| ||++++||+ +++||+||++|||||.+... .
T Consensus 26 ~v~v~~~v~~~~~~~vLL~~r~~---~~~g~w~lP-GG~ve~gEs---------~~~aA~REl~EEtGl~~~~~-----~ 87 (199)
T 3h95_A 26 QVGVAGAVFDESTRKILVVQDRN---KLKNMWKFP-GGLSEPEED---------IGDTAVREVFEETGIKSEFR-----S 87 (199)
T ss_dssp CCEEEEEEEETTTTEEEEEEESS---SSTTSBBCC-EEECCTTCC---------HHHHHHHHHHHHHCCCEEEE-----E
T ss_pred cceEEEEEEeCCCCEEEEEEEcC---CCCCCEECC-ccccCCCCC---------HHHHHHHHHHHHhCCccccc-----e
Confidence 34666777775 47999999864 358999998 999999999 89999999999999997622 2
Q ss_pred eeEE-EEEEcCCCCCCcceEEEEEEEEEe---cCcCCCCccccccEEEEcHHHHHHHH
Q 022053 201 PLGR-ILYKAPSDGKWGEHELDYLLFIVR---DVSVNPNPDEVAEYKYVNREQLKELL 254 (303)
Q Consensus 201 ~l~~-i~y~~~~~~~~~ehei~~vf~~~~---d~~i~~~~~EV~~~~Wvs~eEL~~ll 254 (303)
.++. ..|..+ +... ....+|++.. ...+.++++|+.+++|+++++|.++.
T Consensus 88 l~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~ 141 (199)
T 3h95_A 88 VLSIRQQHTNP--GAFG--KSDMYIICRLKPYSFTINFCQEECLRCEWMDLNDLAKTE 141 (199)
T ss_dssp EEEEEECC-------------CEEEEEEEEESCCCCCCCTTTEEEEEEEEHHHHHHCS
T ss_pred EEEEEeeecCC--CCce--eEEEEEEEEEcCCCcccCCCccceeeeEEEeHHHHhhhh
Confidence 2321 112222 1111 1122233332 34566778999999999999998863
No 49
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=99.65 E-value=6.7e-16 Score=134.42 Aligned_cols=124 Identities=14% Similarity=0.187 Sum_probs=84.7
Q ss_pred eEEEEEEEEeCCCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCceee
Q 022053 122 HRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTP 201 (303)
Q Consensus 122 Hravsv~I~n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~l~~ 201 (303)
.+++.++|++ +|+|||+||. .+|.|.+| ||++++||+ +++||+||++||||+.+... .+
T Consensus 4 ~~v~~~vi~~-~~~vLL~~r~-----~~g~W~lP-GG~ve~gEs---------~~~aa~REl~EEtGl~~~~~-----~~ 62 (188)
T 3fk9_A 4 QRVTNCIVVD-HDQVLLLQKP-----RRGWWVAP-GGKMEAGES---------ILETVKREYWEETGITVKNP-----EL 62 (188)
T ss_dssp CEEEEEEEEE-TTEEEEEECT-----TTCCEECC-EEECCTTCC---------HHHHHHHHHHHHHSCEESSC-----EE
T ss_pred eEEEEEEEEE-CCEEEEEEeC-----CCCeEECC-eecccCCCC---------HHHHHHHHHHHHHCCCCCCc-----eE
Confidence 4566777776 6899999985 37999998 999999999 89999999999999987632 34
Q ss_pred eEEEEEEcCCCCCCcceEEEEEEEEEe-cCcCCCCccccccEEEEcHHHHHHHHHhccCCCCCcccCHHHHHHHHHHH
Q 022053 202 LGRILYKAPSDGKWGEHELDYLLFIVR-DVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFL 278 (303)
Q Consensus 202 l~~i~y~~~~~~~~~ehei~~vf~~~~-d~~i~~~~~EV~~~~Wvs~eEL~~ll~~~~~~~~~~~ftPw~~~i~~~~l 278 (303)
++.+.+.....+.+..+.+.++|.+.. ...+.+. .|..+++|++++++.++ .+.|..+.+++.++
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~f~a~~~~~~~~~~-~e~~~~~W~~~~el~~~-----------~l~~~~~~~l~~~l 128 (188)
T 3fk9_A 63 KGIFSMVIFDEGKIVSEWMLFTFKATEHEGEMLKQ-SPEGKLEWKKKDEVLEL-----------PMAAGDKWIFKHVL 128 (188)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEEESCEESCCCSE-ETTEEEEEEEGGGGGGS-----------CCCHHHHHHHHHHT
T ss_pred EEEEEEEecCCCcceEEEEEEEEEEECCCCCCcCC-CCCEeEEEEEHHHhhhC-----------CCCHHHHHHHHHHH
Confidence 454444332222211122456666653 3333333 45579999999998553 46676666666553
No 50
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=99.63 E-value=1.2e-15 Score=134.51 Aligned_cols=114 Identities=11% Similarity=0.093 Sum_probs=79.9
Q ss_pred EEEEEEEEeCCCeEEEEEecCCCCcCCCceecccCccCC-CCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCceee
Q 022053 123 RAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPL-YRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTP 201 (303)
Q Consensus 123 ravsv~I~n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve-~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~l~~ 201 (303)
.+|.+++++.+|++||.||.... .++|.|.+| ||+++ .||+ +++||+||++||||+.+.. +.+
T Consensus 44 ~av~v~i~~~~~~vLLvrr~r~~-~~~~~w~lP-gG~ve~~gEs---------~~~aa~REl~EEtGl~~~~-----~~~ 107 (207)
T 1mk1_A 44 GAVAIVAMDDNGNIPMVYQYRHT-YGRRLWELP-AGLLDVAGEP---------PHLTAARELREEVGLQAST-----WQV 107 (207)
T ss_dssp CEEEEEECCTTSEEEEEEEEETT-TTEEEEECC-EEECCSTTCC---------HHHHHHHHHHHHHCEEEEE-----EEE
T ss_pred CEEEEEEEcCCCEEEEEEeecCC-CCCcEEEeC-CccccCCCCC---------HHHHHHHHHHHHHCCcccc-----cEE
Confidence 48888889988999998876443 468999998 99999 9999 8999999999999998763 345
Q ss_pred eEEEEEEcCCCCCCcceEEEEEEEEEe-cCcC---CCCccccccEEEEcHHHHHHHHHhc
Q 022053 202 LGRILYKAPSDGKWGEHELDYLLFIVR-DVSV---NPNPDEVAEYKYVNREQLKELLRKA 257 (303)
Q Consensus 202 l~~i~y~~~~~~~~~ehei~~vf~~~~-d~~i---~~~~~EV~~~~Wvs~eEL~~ll~~~ 257 (303)
++.+ |..+ +.. ++..++|++.. .... ..+++|+.+++|++++|+.+++..+
T Consensus 108 l~~~-~~~~---~~~-~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~~ 162 (207)
T 1mk1_A 108 LVDL-DTAP---GFS-DESVRVYLATGLREVGRPEAHHEEADMTMGWYPIAEAARRVLRG 162 (207)
T ss_dssp EEEE-CSCT---TTB-CCCEEEEEEEEEEECCC----------CEEEEEHHHHHHHHHTT
T ss_pred EEEE-EcCC---Ccc-ccEEEEEEEEccccCCCCCCCCCCceEEEEEEEHHHHHHHHHcC
Confidence 6554 3332 211 33455666653 2111 1457889999999999999999864
No 51
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.63 E-value=3.4e-15 Score=129.60 Aligned_cols=123 Identities=12% Similarity=0.008 Sum_probs=87.2
Q ss_pred eeEEEEEEEEeCCCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCcee
Q 022053 121 LHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFT 200 (303)
Q Consensus 121 ~Hravsv~I~n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~l~ 200 (303)
...++.++|++ +|+|||+||.... .+|.|.+| ||+++.||+ +++||+||++|||||.+... .
T Consensus 39 ~~~~v~~ii~~-~~~vLL~~r~~~~--~~g~w~lP-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~~-----~ 100 (189)
T 3cng_A 39 PKVIVGCIPEW-ENKVLLCKRAIAP--YRGKWTLP-AGFMENNET---------LVQGAARETLEEANARVEIR-----E 100 (189)
T ss_dssp CEEEEEEEEEE-TTEEEEEEESSSS--STTCEECS-EEECCTTCC---------HHHHHHHHHHHHHCCCEEEE-----E
T ss_pred CceEEEEEEEe-CCEEEEEEccCCC--CCCeEECc-eeeccCCCC---------HHHHHHHHHHHHHCCccccc-----e
Confidence 34577778877 7899999998653 48999998 999999999 89999999999999987622 2
Q ss_pred eeEEEEEEcCCCCCCcceEEEEEEEEEec-CcCCCCccccccEEEEcHHHHHHHHHhccCCCCCcccCHHHHHHHHHHHH
Q 022053 201 PLGRILYKAPSDGKWGEHELDYLLFIVRD-VSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLF 279 (303)
Q Consensus 201 ~l~~i~y~~~~~~~~~ehei~~vf~~~~d-~~i~~~~~EV~~~~Wvs~eEL~~ll~~~~~~~~~~~ftPw~~~i~~~~l~ 279 (303)
+++.+.| +. .+.+.++|.+... ..+. ..+|+.+++|++++++... ....|..+.++..|+.
T Consensus 101 ~~~~~~~--~~-----~~~~~~~f~~~~~~~~~~-~~~E~~~~~W~~~~el~~~----------~l~~~~~~~~l~~~l~ 162 (189)
T 3cng_A 101 LYAVYSL--PH-----ISQVYMLFRAKLLDLDFF-PGIESLEVRLFGEQEIPWN----------DIAFRVIHDPLKRYME 162 (189)
T ss_dssp EEEEEEE--GG-----GTEEEEEEEEEECCSCCC-CCTTEEEEEEECTTTCCGG----------GBSCHHHHHHHHHHHH
T ss_pred eEEEEec--CC-----CcEEEEEEEEEeCCCccC-CCccceeEEEECHHHcCcc----------cccChHHHHHHHHHHH
Confidence 3333333 21 2456677777653 3333 3578999999999998521 1225656666666654
No 52
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=99.63 E-value=4.5e-15 Score=131.46 Aligned_cols=116 Identities=19% Similarity=0.208 Sum_probs=82.4
Q ss_pred eEEEEEEEEe-CCCeEEEEE--ecCCCC--cCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCC
Q 022053 122 HRAFSVFLFN-SKYELLLQQ--RSGTKV--TFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPV 196 (303)
Q Consensus 122 Hravsv~I~n-~~g~lLLqq--Rs~~K~--~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~ 196 (303)
+.+|++++++ .+|++||.+ |..... ..++.|++| ||++++||+ +++||+|||+||||+.+.
T Consensus 57 ~~av~vl~~~~~~~~vLLvrq~R~~~~~~~~~~~~welP-gG~ve~gE~---------~~~aA~REl~EEtGl~~~---- 122 (209)
T 1g0s_A 57 GHAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMV-AGMIEEGES---------VEDVARREAIEEAGLIVK---- 122 (209)
T ss_dssp CCEEEEEEEETTTTEEEEEEEECGGGGGGSSCSEEEECE-EEECCTTCC---------HHHHHHHHHHHHHCCCCC----
T ss_pred CCEEEEEEEECCCCEEEEEEeecccCCCCCCCCeEEEeC-cccCCCCcC---------HHHHHHHHHHHHcCcccC----
Confidence 3588899998 468888843 443221 126789998 999999999 899999999999999875
Q ss_pred CceeeeEEEEEEcCCCCCCcceEEEEEEEEEecC----c--CCCCccccccEEEEcHHHHHHHHHhc
Q 022053 197 DEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDV----S--VNPNPDEVAEYKYVNREQLKELLRKA 257 (303)
Q Consensus 197 ~~l~~l~~i~y~~~~~~~~~ehei~~vf~~~~d~----~--i~~~~~EV~~~~Wvs~eEL~~ll~~~ 257 (303)
.+.+++.+ |..+ +.. .+..++|++..+. . ..++++|+.++.|++++|+.+++..+
T Consensus 123 -~~~~l~~~-~~~~---g~~-~~~~~~f~a~~~~~~~~~~~~~~~e~E~~~~~w~~~~el~~~i~~g 183 (209)
T 1g0s_A 123 -RTKPVLSF-LASP---GGT-SERSSIMVGEVDATTASGIHGLADENEDIRVHVVSREQAYQWVEEG 183 (209)
T ss_dssp -CEEEEEEE-ESCT---TTB-CCEEEEEEEECCGGGCC--------CCSCEEEEEEHHHHHHHHHTT
T ss_pred -cEEEeEEE-ecCC---Ccc-CcEEEEEEEEEccccccCCCCCCCCCcEEEEEEEEHHHHHHHHHcC
Confidence 34667765 4433 222 3556777776422 1 23567788999999999999999874
No 53
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.63 E-value=4.8e-16 Score=137.12 Aligned_cols=111 Identities=13% Similarity=0.140 Sum_probs=78.5
Q ss_pred eeEEEEEEEEeCCCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCcee
Q 022053 121 LHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFT 200 (303)
Q Consensus 121 ~Hravsv~I~n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~l~ 200 (303)
.+.++.++|++ +|+|||+||.. +|.|.+| ||++++||+ +.+||+||++||||+.+.. ..
T Consensus 67 ~~~~v~~vv~~-~~~vLLv~r~~-----~g~w~lP-gG~ve~gEs---------~~~aa~REl~EEtGl~v~~-----~~ 125 (205)
T 3q1p_A 67 PKVDIRAVVFQ-NEKLLFVKEKS-----DGKWALP-GGWADVGYT---------PTEVAAKEVFEETGYEVDH-----FK 125 (205)
T ss_dssp CEEEEEEEEEE-TTEEEEEEC--------CCEECS-EEECCTTCC---------HHHHHHHHHHHHHSEEEEE-----EE
T ss_pred CcceEEEEEEE-CCEEEEEEEcC-----CCcEECC-cCccCCCCC---------HHHHHHHHHHHHHCCcccc-----ce
Confidence 45677778887 68999999862 6899998 999999999 8999999999999998763 23
Q ss_pred eeEEEEEEcCCCCCCcceEEEEEEEEEe-cCcCCCCccccccEEEEcHHHHHHH
Q 022053 201 PLGRILYKAPSDGKWGEHELDYLLFIVR-DVSVNPNPDEVAEYKYVNREQLKEL 253 (303)
Q Consensus 201 ~l~~i~y~~~~~~~~~ehei~~vf~~~~-d~~i~~~~~EV~~~~Wvs~eEL~~l 253 (303)
+++.+.+......+...+.+.++|.+.. ...+.++ +|+.+++|+++++|.++
T Consensus 126 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~E~~~~~w~~~~el~~l 178 (205)
T 3q1p_A 126 LLAIFDKEKHQPSPSATHVYKIFIGCEIIGGEKKTS-IETEEVEFFGENELPNL 178 (205)
T ss_dssp EEEEEEHHHHSCCCCSSCEEEEEEEEEEEEECCCCC-TTSCCEEEECTTSCCCB
T ss_pred EEEEEeccccCCCCCCceEEEEEEEEEecCCccCCC-CcceEEEEEeHHHhhhc
Confidence 4444432111111112345555666654 4455555 79999999999998654
No 54
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=99.63 E-value=8e-16 Score=128.98 Aligned_cols=122 Identities=18% Similarity=0.180 Sum_probs=81.3
Q ss_pred EEEEEEEEeCCCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCC-Cceee
Q 022053 123 RAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPV-DEFTP 201 (303)
Q Consensus 123 ravsv~I~n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~-~~l~~ 201 (303)
.+++++|++ +|++||+||.. +|.|.+| ||++++||+ +.+||+||++||||+.+..... ..+..
T Consensus 2 ~~~~~vi~~-~~~vLL~~r~~-----~g~W~lP-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~~~~~~~~~~ 65 (156)
T 1k2e_A 2 IVTSGVLVE-NGKVLLVKHKR-----LGVYIYP-GGHVEHNET---------PIEAVKREFEEETGIVVEPIGFTYGIID 65 (156)
T ss_dssp EEEEEECEE-TTEEEEEECTT-----TCSEECS-EEECCTTCC---------HHHHHHHHHHHHHSEEEEECCCCCCCBS
T ss_pred eEEEEEEEE-CCEEEEEEEcC-----CCcEECC-eeecCCCCC---------HHHHHHHHHHHHHCCcceeccceeeecc
Confidence 356778888 79999999863 6899998 999999999 8999999999999998864321 00100
Q ss_pred ----------eEEEE-EEcCCCCCCcceEEEEEEEEEecCcCCCCccccccEEEEcHHHHHHHHHhccCCCCCcccCHHH
Q 022053 202 ----------LGRIL-YKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWF 270 (303)
Q Consensus 202 ----------l~~i~-y~~~~~~~~~ehei~~vf~~~~d~~i~~~~~EV~~~~Wvs~eEL~~ll~~~~~~~~~~~ftPw~ 270 (303)
..... +..+ +. ....++.+|.+.. ..+|+.+++|++++|+.++ .+.|..
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~f~~~~------~~~e~~~~~W~~~~el~~~-----------~~~~~~ 125 (156)
T 1k2e_A 66 ENAVERPMPLVILEEVVKYP--EE-THIHFDLIYLVKR------VGGDLKNGEWIDVREIDRI-----------ETFPNV 125 (156)
T ss_dssp SSEEECCCCSEEEEEEEECS--SC-EEEEEEEEEEEEE------EEECCCSCEEEEGGGGGGS-----------CBSTTH
T ss_pred cccccccccceeeeeeecCC--CC-ceEEEEEEEEEEe------cCCcEeeeEEeCHHHHhcC-----------CCChHH
Confidence 00000 1111 11 1123444455542 2357889999999998642 456777
Q ss_pred HHHHHHHHHH
Q 022053 271 RLVVDNFLFK 280 (303)
Q Consensus 271 ~~i~~~~l~~ 280 (303)
+.+++.++..
T Consensus 126 ~~~l~~~~~~ 135 (156)
T 1k2e_A 126 RKVVSLALST 135 (156)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7777766543
No 55
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.62 E-value=2.2e-15 Score=132.31 Aligned_cols=112 Identities=17% Similarity=0.153 Sum_probs=78.0
Q ss_pred CceeEEEEEEEE-eCCCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCC
Q 022053 119 NLLHRAFSVFLF-NSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVD 197 (303)
Q Consensus 119 gl~Hravsv~I~-n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~ 197 (303)
+..++++++++. +.+++|||+||.. .||.|.+| ||++++||+ +++||+||++|||||.+..
T Consensus 38 ~~~~~~~~vi~~~~~~~~vLLv~r~~----~~g~W~lP-gG~ve~gEt---------~~eaa~REl~EEtGl~~~~---- 99 (194)
T 2fvv_A 38 GYKKRAACLCFRSESEEEVLLVSSSR----HPDRWIVP-GGGMEPEEE---------PSVAAVREVCEEAGVKGTL---- 99 (194)
T ss_dssp SCEEEEEEEEESSTTCCEEEEEECSS----CTTSEECS-EEECCTTCC---------HHHHHHHHHHHHHCEEEEE----
T ss_pred CccccEEEEEEEECCCCEEEEEEEeC----CCCcEECC-CCcCCCCcC---------HHHHHHHHHHHHhCCcccc----
Confidence 445666665553 4568999999864 37999998 999999999 8999999999999998763
Q ss_pred ceeeeEEEEEEcCCCCCCcceEEEEEEEEEecCcCCC---CccccccEEEEcHHHHHHHHHh
Q 022053 198 EFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNP---NPDEVAEYKYVNREQLKELLRK 256 (303)
Q Consensus 198 ~l~~l~~i~y~~~~~~~~~ehei~~vf~~~~d~~i~~---~~~EV~~~~Wvs~eEL~~ll~~ 256 (303)
..+++.+.+. . . ....++|++........ +.++..+++|++++|+.+++..
T Consensus 100 -~~~l~~~~~~--~-~----~~~~~~f~~~~~~~~~~~~~~~e~~~~~~W~~~~el~~~l~~ 153 (194)
T 2fvv_A 100 -GRLVGIFENQ--E-R----KHRTYVYVLIVTEVLEDWEDSVNIGRKREWFKIEDAIKVLQY 153 (194)
T ss_dssp -EEEEEEEEET--T-T----TEEEEEEEEEEEEECSSCHHHHHHCCCEEEEEHHHHHHHHTT
T ss_pred -ceEEEEEEcC--C-C----ceEEEEEEEEEccccCCCCCcccccceEEEEEHHHHHHHHhc
Confidence 3456665431 1 1 12345565543222211 1124578999999999998765
No 56
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=99.62 E-value=6.7e-15 Score=128.38 Aligned_cols=115 Identities=15% Similarity=0.121 Sum_probs=82.2
Q ss_pred eeEEEEEEEEeC-CCeEEEEEecCCC----Cc-CCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccC
Q 022053 121 LHRAFSVFLFNS-KYELLLQQRSGTK----VT-FPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDV 194 (303)
Q Consensus 121 ~Hravsv~I~n~-~g~lLLqqRs~~K----~~-~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~ 194 (303)
.|.++.+++++. +|++||.++.... .. .++.|++| ||+++ ||+ +++||+||++||||+.+.
T Consensus 44 ~~~av~v~~~~~~~~~vlLv~~~r~~~~~~~~~~~~~w~lP-gG~ve-gE~---------~~~aa~REl~EEtG~~~~-- 110 (191)
T 3o6z_A 44 RGNGATILLYNTKKKTVVLIRQFRVATWVNGNESGQLIESC-AGLLD-NDE---------PEVCIRKEAIEETGYEVG-- 110 (191)
T ss_dssp CCCEEEEEEEETTTTEEEEEEEECHHHHTTTCTTCEEEECE-EEECC-SSC---------HHHHHHHHHHHHC-CCCS--
T ss_pred cCCEEEEEEEECCCCEEEEEEcCCccccccCCCCCeEEEec-ceEeC-CCC---------HHHHHHHHHHHHhCCccC--
Confidence 466889999985 5898887654311 11 57899998 99999 999 899999999999999875
Q ss_pred CCCceeeeEEEEEEcCCCCCCcceEEEEEEEEEecCc------CCCCccccccEEEEcHHHHHHHHHhc
Q 022053 195 PVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVS------VNPNPDEVAEYKYVNREQLKELLRKA 257 (303)
Q Consensus 195 ~~~~l~~l~~i~y~~~~~~~~~ehei~~vf~~~~d~~------i~~~~~EV~~~~Wvs~eEL~~ll~~~ 257 (303)
.+.+++.+ |..+ +.. .+..++|++..... ..+ ++|+.+++|++++|+.+++..+
T Consensus 111 ---~~~~l~~~-~~~~---~~~-~~~~~~f~~~~~~~~~~~~~~~~-~~E~~~~~w~~~~el~~~~~~g 170 (191)
T 3o6z_A 111 ---EVRKLFEL-YMSP---GGV-TELIHFFIAEYSDNQRANAGGGV-EDEAIEVLELPFSQALEMIKTG 170 (191)
T ss_dssp ---CEEEEEEE-ESCT---TTB-CCEEEEEEEECCTTCC---------CCSSEEEEEEHHHHHHHHHHS
T ss_pred ---cEEEEEEE-EeCC---Ccc-CcEEEEEEEEEcccccccCCCCC-CCcEEEEEEEEHHHHHHHHHcC
Confidence 34567664 3332 112 34567777764321 122 6799999999999999999974
No 57
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.61 E-value=8.3e-15 Score=137.90 Aligned_cols=137 Identities=12% Similarity=0.156 Sum_probs=95.9
Q ss_pred CceeEEEEEEEEeCCCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCc
Q 022053 119 NLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDE 198 (303)
Q Consensus 119 gl~Hravsv~I~n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~ 198 (303)
...|.++.++|++ +|+|||+||...+ .+|.|.+| ||++++||+ +++||+||++||||+.+....+.
T Consensus 205 ~~~~~~v~~vv~~-~~~vLL~~r~~~~--~~g~w~lP-gG~ve~gEt---------~~~aa~REl~EEtGl~v~~~~~~- 270 (352)
T 2qjt_B 205 KPNFVTVDALVIV-NDHILMVQRKAHP--GKDLWALP-GGFLECDET---------IAQAIIRELFEETNINLTHEQLA- 270 (352)
T ss_dssp CCEEEEEEEEEEE-TTEEEEEEESSSS--STTCEECS-EEECCTTSC---------HHHHHHHHHHHHHCCSCCHHHHH-
T ss_pred CCCceEEEEEEEE-CCEEEEEEEcCCC--CCCeEECC-CCcCCCCCC---------HHHHHHHHHHHhhCCCcccchhc-
Confidence 4578888888884 6899999997643 58999998 999999999 89999999999999987632110
Q ss_pred eeeeEEEEEEcCCCCCCcceEEEEEEEEEec-Cc--CC-CCccccccEEEEcH-HHHHHHHHhccCCCCCcccCHHHHHH
Q 022053 199 FTPLGRILYKAPSDGKWGEHELDYLLFIVRD-VS--VN-PNPDEVAEYKYVNR-EQLKELLRKADAGEEGLKLSPWFRLV 273 (303)
Q Consensus 199 l~~l~~i~y~~~~~~~~~ehei~~vf~~~~d-~~--i~-~~~~EV~~~~Wvs~-eEL~~ll~~~~~~~~~~~ftPw~~~i 273 (303)
..+.....|..+.... ..+.+.++|++... .. +. .+++|+.+++|+++ +|+.++ +..+.|..+.+
T Consensus 271 ~~~~~~~~~~~~~~~~-~~~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~~el~~~---------~~~~~~~~~~i 340 (352)
T 2qjt_B 271 IAKRCEKVFDYPDRSV-RGRTISHVGLFVFDQWPSLPEINAADDAKDVKWISLGSNIKNI---------CDRMLEDHYQI 340 (352)
T ss_dssp HHEEEEEEECCTTSCT-TSEEEEEEEEEEECSCSSCCCCCCCTTEEEEEEEESSHHHHHT---------TTSBSTTHHHH
T ss_pred ceeeeeEEecCCCCCC-CccEEEEEEEEEEeCCCCCCccCCCccceEEEEecHHHHHHhh---------hhhhChhHHHH
Confidence 0122233454443221 12445566666542 22 22 24689999999999 999875 23678888888
Q ss_pred HHHHHH
Q 022053 274 VDNFLF 279 (303)
Q Consensus 274 ~~~~l~ 279 (303)
++.++.
T Consensus 341 l~~~~~ 346 (352)
T 2qjt_B 341 ITILLE 346 (352)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887754
No 58
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=99.61 E-value=8.8e-16 Score=135.49 Aligned_cols=123 Identities=14% Similarity=0.126 Sum_probs=84.3
Q ss_pred eeEEEEEEEEeCCCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCcee
Q 022053 121 LHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFT 200 (303)
Q Consensus 121 ~Hravsv~I~n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~l~ 200 (303)
.+.++.++|+++ |+|||+||. +|.|.+| ||++++||+ +.+||+||++||||+.+.. ..
T Consensus 69 ~~~~v~~vv~~~-~~vLLvrr~------~g~w~lP-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~-----~~ 126 (206)
T 3o8s_A 69 PKLDTRAAIFQE-DKILLVQEN------DGLWSLP-GGWCDVDQS---------VKDNVVKEVKEEAGLDVEA-----QR 126 (206)
T ss_dssp CEEEEEEEEEET-TEEEEEECT------TSCEECS-EEECCTTSC---------HHHHHHHHHHHHHCEEEEE-----EE
T ss_pred CCccEEEEEEEC-CEEEEEEec------CCeEECC-eeccCCCCC---------HHHHHHHHHHHHHCCccee-----ee
Confidence 456777788874 899999987 6899998 999999999 8999999999999998763 23
Q ss_pred eeEEEEEEcCCCCCCcceEEEEEEEEEe-cCcCCCCccccccEEEEcHHHHHHHHHhccCCCCCcccCHHHHHHHHHH
Q 022053 201 PLGRILYKAPSDGKWGEHELDYLLFIVR-DVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNF 277 (303)
Q Consensus 201 ~l~~i~y~~~~~~~~~ehei~~vf~~~~-d~~i~~~~~EV~~~~Wvs~eEL~~ll~~~~~~~~~~~ftPw~~~i~~~~ 277 (303)
+++.+.+......+...+.+.++|.+.. ...+.++ +|+.+++|+++++|.++ .+.+.++.++..+
T Consensus 127 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~E~~~~~w~~~~el~~l-----------~~~~~~~~~l~~~ 192 (206)
T 3o8s_A 127 VVAILDKHKNNPAKSAHRVTKVFILCRLLGGEFQPN-SETVASGFFSLDDLPPL-----------YLGKNTAEQLALC 192 (206)
T ss_dssp EEEEEEHHHHCC-----CEEEEEEEEEEEEECCCCC-SSCSEEEEECTTSCCCB-----------CTTTCCHHHHHHH
T ss_pred EEEEEeccccCCCCCCceEEEEEEEEEecCCeecCC-CCceEEEEEeHHHhhhc-----------cCCCchHHHHHHH
Confidence 4554432111111112244445555553 3445554 79999999999998654 3445555555554
No 59
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.61 E-value=5.9e-15 Score=126.06 Aligned_cols=115 Identities=13% Similarity=0.108 Sum_probs=79.4
Q ss_pred eeEEEEEEEEeCCCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCcee
Q 022053 121 LHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFT 200 (303)
Q Consensus 121 ~Hravsv~I~n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~l~ 200 (303)
...++.+++. .+|++||.||. +|.|.+| ||++++||+ +.+||+||++||||+.+.. +.
T Consensus 15 ~~~~~~~ii~-~~~~vLL~~r~------~g~w~lP-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~-----~~ 72 (163)
T 3f13_A 15 LARRATAIIE-MPDGVLVTASR------GGRYNLP-GGKANRGEL---------RSQALIREIREETGLRINS-----ML 72 (163)
T ss_dssp CEEEEEEECE-ETTEEEEEECC---------BBCS-EEECCTTCC---------HHHHHHHHHHHHHCCCCCE-----EE
T ss_pred ceEEEEEEEE-eCCEEEEEEEC------CCeEECC-ceeCCCCCC---------HHHHHHHHHHHHHCcccce-----eE
Confidence 4445555554 45889998885 5899998 999999999 8999999999999999763 23
Q ss_pred eeEEEEEEcCCCCCCcceEEEEEEEEEecCcCCCCccccccEEEEcHHHHHHHHHhccCCCCCcccCHHHHHHHHHHHH
Q 022053 201 PLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLF 279 (303)
Q Consensus 201 ~l~~i~y~~~~~~~~~ehei~~vf~~~~d~~i~~~~~EV~~~~Wvs~eEL~~ll~~~~~~~~~~~ftPw~~~i~~~~l~ 279 (303)
+++.+ ..+ ....++|++..++.+.++ +|+.+++|++.++ .+..+.|..+.+++.|+.
T Consensus 73 ~l~~~--~~~-------~~~~~~f~~~~~~~~~~~-~E~~~~~W~~~~~------------~~~~l~~~~~~il~~~~~ 129 (163)
T 3f13_A 73 YLFDH--ITP-------FNAHKVYLCIAQGQPKPQ-NEIERIALVSSPD------------TDMDLFVEGRAILRRYAR 129 (163)
T ss_dssp EEEEE--ECS-------SEEEEEEEEEC-CCCCCC-TTCCEEEEESSTT------------CSSCBCHHHHHHHHHHHH
T ss_pred EEEEE--ecC-------CeEEEEEEEEECCcCccC-CCceEEEEECccc------------ccCCCCHHHHHHHHHHHH
Confidence 45443 322 145566777666666666 4999999999332 134677877777776644
No 60
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=99.61 E-value=2.2e-15 Score=139.47 Aligned_cols=106 Identities=18% Similarity=0.210 Sum_probs=80.9
Q ss_pred eEEEEEEEEeCCCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCceee
Q 022053 122 HRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTP 201 (303)
Q Consensus 122 Hravsv~I~n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~l~~ 201 (303)
..++.++ ++.+|+|||+||.... +|+|++| ||++++||+ +++||+||++||||+.+.. +.+
T Consensus 140 ~~~viv~-v~~~~~vLL~rr~~~~---~g~w~lP-gG~vE~GEt---------~eeAa~REv~EEtGl~v~~-----~~~ 200 (269)
T 1vk6_A 140 APCIIVA-IRRDDSILLAQHTRHR---NGVHTVL-AGFVEVGET---------LEQAVAREVMEESGIKVKN-----LRY 200 (269)
T ss_dssp EEEEEEE-EEETTEEEEEEETTTC---SSCCBCE-EEECCTTCC---------HHHHHHHHHHHHHCCEEEE-----EEE
T ss_pred CcEEEEE-EEeCCEEEEEEecCCC---CCcEECC-cCcCCCCCC---------HHHHHHHHHHHHhCceeee-----EEE
Confidence 3444444 4456899999998643 6999998 999999999 8999999999999999763 456
Q ss_pred eEEEEEEcCCCCCCcceEEEEEEEEEe-cCcCCCCccccccEEEEcHHHHHHH
Q 022053 202 LGRILYKAPSDGKWGEHELDYLLFIVR-DVSVNPNPDEVAEYKYVNREQLKEL 253 (303)
Q Consensus 202 l~~i~y~~~~~~~~~ehei~~vf~~~~-d~~i~~~~~EV~~~~Wvs~eEL~~l 253 (303)
++.+.+..+ +.+.++|.+.. +..+.++++|+.+++|++++|+.++
T Consensus 201 ~~~~~~~~~-------~~~~~~f~a~~~~~~~~~~~~E~~~~~W~~~~el~~l 246 (269)
T 1vk6_A 201 VTSQPWPFP-------QSLMTAFMAEYDSGDIVIDPKELLEANWYRYDDLPLL 246 (269)
T ss_dssp EEEEEEETT-------EEEEEEEEEEEEECCCCCCTTTEEEEEEEETTSCCSC
T ss_pred EEEEecCCC-------CEEEEEEEEEECCCCcCCCCcceEEEEEEEHHHhhhc
Confidence 776655432 34556666654 4556677789999999999998653
No 61
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.61 E-value=1.2e-15 Score=137.15 Aligned_cols=114 Identities=18% Similarity=0.205 Sum_probs=81.8
Q ss_pred CceeEEEEEEEE---eCCCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCC
Q 022053 119 NLLHRAFSVFLF---NSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVP 195 (303)
Q Consensus 119 gl~Hravsv~I~---n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~ 195 (303)
...+.++.++|+ +.+++|||+||... .++|.|.+| ||++++||+ +++||+||++||||+.+..
T Consensus 10 ~~p~v~v~~vi~~~~~~~~~vLLv~r~~~--~~~g~w~lP-GG~ve~gEs---------~~~Aa~REl~EEtGl~~~~-- 75 (226)
T 2fb1_A 10 PTFYLGIDCIIFGFNEGEISLLLLKRNFE--PAMGEWSLM-GGFVQKDES---------VDDAAKRVLAELTGLENVY-- 75 (226)
T ss_dssp CCEEEEEEEEEEEEETTEEEEEEEECSSS--SSTTCEECE-EEECCTTSC---------HHHHHHHHHHHHHCCCSCE--
T ss_pred CCCeEEEEEEEEEEeCCCCEEEEEECcCC--CCCCCEECC-eeccCCCCC---------HHHHHHHHHHHHHCCCCCc--
Confidence 346778888887 55679999999763 468999998 999999999 8999999999999998752
Q ss_pred CCceeeeEEEEEEcCCCCCCcceEEEEEEEEEecC-cCCCCccccccEEEEcHHHHHH
Q 022053 196 VDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDV-SVNPNPDEVAEYKYVNREQLKE 252 (303)
Q Consensus 196 ~~~l~~l~~i~y~~~~~~~~~ehei~~vf~~~~d~-~i~~~~~EV~~~~Wvs~eEL~~ 252 (303)
+..++.+. .+.... ..+.+..+|++.... ....+++|+.+++|++++|+.+
T Consensus 76 ---~~~l~~~~--~~~r~~-~~~~v~~~y~a~~~~~~~~~~~~e~~~~~W~~~~el~~ 127 (226)
T 2fb1_A 76 ---MEQVGAFG--AIDRDP-GERVVSIAYYALININEYDRELVQKHNAYWVNINELPA 127 (226)
T ss_dssp ---EEEEEEEC--CTTSSS-SSCEEEEEEEEECCTTSSCHHHHHHTTEEEEETTSCCC
T ss_pred ---eEEEEEeC--CCCcCC-CceEEEEEEEEEecCcccccCCccccceEEEEHHHhhh
Confidence 23455442 222111 124455556665432 2333457899999999999854
No 62
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.61 E-value=4.7e-15 Score=138.62 Aligned_cols=135 Identities=10% Similarity=0.054 Sum_probs=89.0
Q ss_pred CceeEEEEEEEEeCCCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCC-C
Q 022053 119 NLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPV-D 197 (303)
Q Consensus 119 gl~Hravsv~I~n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~-~ 197 (303)
...+.++.++|++ +|++||+||... .++|.|.+| ||++++||+ +++||+||++||||+.+....+ .
T Consensus 200 ~~~~~~v~~vi~~-~~~vLL~~r~~~--~~~g~w~lP-gG~ve~gE~---------~~~aa~REl~EEtGl~~~~~~~~~ 266 (341)
T 2qjo_A 200 APTFITTDAVVVQ-AGHVLMVRRQAK--PGLGLIALP-GGFIKQNET---------LVEGMLRELKEETRLKVPLPVLRG 266 (341)
T ss_dssp CCCEEEEEEEEEE-TTEEEEEECCSS--SSTTCEECS-EEECCTTSC---------HHHHHHHHHHHHHCCSSCHHHHHH
T ss_pred CCCceEEEEEEEe-CCEEEEEEecCC--CCCCeEECC-CCcCCCCCC---------HHHHHHHHHhhhhCCccccccccc
Confidence 4467888888885 689999999754 358999998 999999999 8999999999999999763211 0
Q ss_pred ceeeeEEEEEEcCCCCCCcceEEEEEEEEEec-CcC--CCCccccccEEEEcHHHHHHHHHhccCCCCCcccCHHHHHHH
Q 022053 198 EFTPLGRILYKAPSDGKWGEHELDYLLFIVRD-VSV--NPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVV 274 (303)
Q Consensus 198 ~l~~l~~i~y~~~~~~~~~ehei~~vf~~~~d-~~i--~~~~~EV~~~~Wvs~eEL~~ll~~~~~~~~~~~ftPw~~~i~ 274 (303)
.+ .....|..+.... ..+.+.++|++... ... ..+++|+.+++|++++|+.++. ..+.|..+.++
T Consensus 267 ~~--~~~~~~~~~~~~~-~~~~~~~~f~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~---------~~~~~~~~~il 334 (341)
T 2qjo_A 267 SI--VDSHVFDAPGRSL-RGRTITHAYFIQLPGGELPAVKGGDDAQKAWWMSLADLYAQE---------EQIYEDHFQII 334 (341)
T ss_dssp TE--EEEEEECCTTSCT-TSCEEEEEEEEECCSSSCCCCC------CEEEEEHHHHHHTG---------GGBCTTHHHHH
T ss_pred cc--cceEEEeCCCCCC-CCcEEEEEEEEEecCCCcCccCCCCceeeEEEeeHHHHhhhh---------hhhchHHHHHH
Confidence 11 1123344443211 12455566666542 221 2456899999999999998751 35777777777
Q ss_pred HHHH
Q 022053 275 DNFL 278 (303)
Q Consensus 275 ~~~l 278 (303)
+.++
T Consensus 335 ~~~~ 338 (341)
T 2qjo_A 335 QHFV 338 (341)
T ss_dssp HHHC
T ss_pred HHHH
Confidence 7664
No 63
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=99.59 E-value=8.3e-15 Score=128.76 Aligned_cols=113 Identities=20% Similarity=0.142 Sum_probs=84.4
Q ss_pred EEEEEEEEeCCCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCceeee
Q 022053 123 RAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPL 202 (303)
Q Consensus 123 ravsv~I~n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~l~~l 202 (303)
.++.+++++++ ++||++|... ...+|.|++| ||++++||+ +++||+|||+||||+.+.. +.++
T Consensus 50 ~av~vl~~~~~-~vLLvrq~r~-~~~~~~welP-gG~ve~gEs---------~~~aA~REl~EEtGl~~~~-----~~~l 112 (198)
T 1vhz_A 50 EAVMIVPIVDD-HLILIREYAV-GTESYELGFS-KGLIDPGES---------VYEAANRELKEEVGFGAND-----LTFL 112 (198)
T ss_dssp CEEEEEEEETT-EEEEEEEEET-TTTEEEEECE-EEECCTTCC---------HHHHHHHHHHHHHSEEEEE-----EEEE
T ss_pred CEEEEEEEECC-EEEEEEcccC-CCCCcEEEeC-cccCCCCcC---------HHHHHHHHHHHHHCCCcCc-----eEEE
Confidence 47788878876 9988876533 2467899998 999999999 8999999999999998763 4566
Q ss_pred EEEEEEcCCCCCCcceEEEEEEEEEe--cCcCCCCccccccEEEEcHHHHHHHHHhc
Q 022053 203 GRILYKAPSDGKWGEHELDYLLFIVR--DVSVNPNPDEVAEYKYVNREQLKELLRKA 257 (303)
Q Consensus 203 ~~i~y~~~~~~~~~ehei~~vf~~~~--d~~i~~~~~EV~~~~Wvs~eEL~~ll~~~ 257 (303)
+.+.+ .+ +.. ++..++|++.. .....++++|+.++.|++++|+.+++..+
T Consensus 113 ~~~~~-~~---~~~-~~~~~~f~a~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~~ 164 (198)
T 1vhz_A 113 KKLSM-AP---SYF-SSKMNIVVAQDLYPESLEGDEPEPLPQVRWPLAHMMDLLEDP 164 (198)
T ss_dssp EEEEC-CT---TTC-CCEEEEEEEEEEEECCCCCCCSSCCCEEEEEGGGGGGGGGCT
T ss_pred EEEeC-CC---Ccc-CcEEEEEEEEeCCcccCCCCCCceEEEEEEEHHHHHHHHHcC
Confidence 66532 22 111 34556676653 23445677899999999999999998763
No 64
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=99.59 E-value=5.5e-15 Score=134.02 Aligned_cols=136 Identities=13% Similarity=0.100 Sum_probs=91.3
Q ss_pred eeEEEEEEEE---eCCCeEEEEEecCCCCcCCCceecccCccCCC--CCChhhhhhhhcHHHHHHHHHHHHhCCCcccCC
Q 022053 121 LHRAFSVFLF---NSKYELLLQQRSGTKVTFPLVWTNTCCSHPLY--RESELIEENALGVRNAAQRKLLDELGICAEDVP 195 (303)
Q Consensus 121 ~Hravsv~I~---n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve~--gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~ 195 (303)
.+.+|.++|+ +.+++|||+||.. ..++|.|.+| ||++++ ||+ +.+||+|||+|||||.+..
T Consensus 21 p~v~v~~vi~~~~~~~~~vLLv~R~~--~~~~g~W~lP-GG~ve~~~gEs---------~~~AA~REl~EEtGl~~~~-- 86 (240)
T 3gz5_A 21 QLLTVDAVLFTYHDQQLKVLLVQRSN--HPFLGLWGLP-GGFIDETCDES---------LEQTVLRKLAEKTAVVPPY-- 86 (240)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEECCS--SSSTTCEECS-EEECCTTTCSB---------HHHHHHHHHHHHHSSCCSE--
T ss_pred CccEEEEEEEEEeCCCcEEEEEECcC--CCCCCCEECC-ccccCCCCCcC---------HHHHHHHHHHHHHCCCCCc--
Confidence 4567777776 3456999999984 3478999998 999999 999 8999999999999998752
Q ss_pred CCceeeeEEEEEEcCCCCCCcceEEEEEEEEEec-CcCCCCccccccEEEEcHHHHHHHHHhccCCCCCcccCHHHHHHH
Q 022053 196 VDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRD-VSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVV 274 (303)
Q Consensus 196 ~~~l~~l~~i~y~~~~~~~~~ehei~~vf~~~~d-~~i~~~~~EV~~~~Wvs~eEL~~ll~~~~~~~~~~~ftPw~~~i~ 274 (303)
+..++.+.+.....++ +.+..+|++... ....++.+|+.+++|++++|+.+ ..+..-.+.++
T Consensus 87 ---~~~l~~~~~~~r~~~~---~~~~~~y~a~~~~~~~~~~~~e~~~~~W~~~~el~~-----------~~l~~dh~~il 149 (240)
T 3gz5_A 87 ---IEQLCTVGNNSRDARG---WSVTVCYTALMSYQACQIQIASVSDVKWWPLADVLQ-----------MPLAFDHLQLI 149 (240)
T ss_dssp ---EEEEEEEEESSSSTTS---CEEEEEEEEECCHHHHHHHHTTCTTEEEEEHHHHTT-----------SCCSTTHHHHH
T ss_pred ---eeeEEEeCCCccCCCc---eEEEEEEEEEecccccCCCCCcccceEEecHHHccc-----------CCcchhHHHHH
Confidence 3455555443222222 445555665542 22233467899999999999842 12333345666
Q ss_pred HHHHHHHHHHhcc
Q 022053 275 DNFLFKWWDHLEK 287 (303)
Q Consensus 275 ~~~l~~ww~~~~~ 287 (303)
...+.+--.++..
T Consensus 150 ~~a~~rlr~kl~y 162 (240)
T 3gz5_A 150 EQARERLTQKALY 162 (240)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccc
Confidence 6665555554443
No 65
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=99.58 E-value=5.8e-15 Score=132.56 Aligned_cols=137 Identities=12% Similarity=0.049 Sum_probs=82.0
Q ss_pred eEEEEcCCCcEEeeeeccccchhhhhccCCceeEEEEEEEEeC-CCeEEEEE--ecCCC---------------------
Q 022053 90 ECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNS-KYELLLQQ--RSGTK--------------------- 145 (303)
Q Consensus 90 ~~~vvDe~d~~iG~~tr~~~H~~~~i~~~gl~Hravsv~I~n~-~g~lLLqq--Rs~~K--------------------- 145 (303)
.+.+.+.||+.. ++..+ ..|.+|+|++++. ++++||.| |..-.
T Consensus 17 ~~~~~~~~G~~~---~~e~v----------~~~~aV~vl~~~~~~~~vlLvrQ~R~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (218)
T 3q91_A 17 NLYFQSMNGAQK---SWDFM----------KTHDSVTVLLFNSSRRSLVLVKQFRPAVYAGEVERRFPGSLAAVDQDGPR 83 (218)
T ss_dssp -------------------------------CCCEEEEEEEEGGGTEEEEEEEECHHHHHHHTC----------------
T ss_pred EEEEECCCCCEE---EEEEE----------EcCCeEEEEEEECCCCEEEEEEcccccccccccccccccccccccccccc
Confidence 456667777642 22221 1477999999994 57888855 42200
Q ss_pred -------CcCCCceecccCccCCC-CCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCceeeeEEEEEEcCCCCCCcc
Q 022053 146 -------VTFPLVWTNTCCSHPLY-RESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGE 217 (303)
Q Consensus 146 -------~~~PG~W~~p~gGhve~-gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~l~~l~~i~y~~~~~~~~~e 217 (303)
...++.|++| ||++++ ||+ +++||+|||+||||+.+. ...+.+++.+. ..+ +..
T Consensus 84 ~~~~~~~~~~~~~welP-gG~ve~~gEs---------~~eaA~REl~EEtGl~~~---~~~l~~l~~~~-~~~---g~~- 145 (218)
T 3q91_A 84 ELQPALPGSAGVTVELC-AGLVDQPGLS---------LEEVACKEAWEECGYHLA---PSDLRRVATYW-SGV---GLT- 145 (218)
T ss_dssp ---------CCEEEECE-EEECCSSSCC---------HHHHHHHHHHHHHCBCCC---GGGCEEEEEEE-EC------C-
T ss_pred ccccccccCCCeEEECC-cceeCCCCCC---------HHHHHHHHHHHHhCCccc---cCceEEEEEEe-cCC---Ccc-
Confidence 1126899998 999999 999 899999999999999973 12456777653 322 112
Q ss_pred eEEEEEEEEEecC-------cCCCCccccccEEEEcHHHHHHHHHhc
Q 022053 218 HELDYLLFIVRDV-------SVNPNPDEVAEYKYVNREQLKELLRKA 257 (303)
Q Consensus 218 hei~~vf~~~~d~-------~i~~~~~EV~~~~Wvs~eEL~~ll~~~ 257 (303)
.+..++|++..+. ...++++|+.++.|++++|+.+++.++
T Consensus 146 ~~~~~~f~a~~~~~~~~~~~~~~~d~~E~~ev~wv~l~el~~~i~~g 192 (218)
T 3q91_A 146 GSRQTMFYTEVTDAQRSGPGGGLVEEGELIEVVHLPLEGAQAFADDP 192 (218)
T ss_dssp CEEEEEEEEEECGGGBCC---------CCEEEEEEEGGGHHHHHHCT
T ss_pred ceEEEEEEEEECCcccccCCCCCCCCCcEEEEEEEEHHHHHHHHHcC
Confidence 4566777776431 245667899999999999999999974
No 66
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=99.51 E-value=4e-14 Score=125.24 Aligned_cols=114 Identities=13% Similarity=0.036 Sum_probs=77.5
Q ss_pred eEEEEEEEE--eC--CCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCC
Q 022053 122 HRAFSVFLF--NS--KYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVD 197 (303)
Q Consensus 122 Hravsv~I~--n~--~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~ 197 (303)
+.+|+|+.+ +. ++++||.++... ...++.|++| ||++++||+ +++||+|||+||||+.+..
T Consensus 61 ~~av~v~~v~~~~~~~~~vlLv~q~R~-~~~~~~welP-gG~ve~gEs---------~~~aA~REl~EEtGl~~~~---- 125 (212)
T 2dsc_A 61 ADGVAVIPVLQRTLHYECIVLVKQFRP-PMGGYCIEFP-AGLIDDGET---------PEAAALRELEEETGYKGDI---- 125 (212)
T ss_dssp CSEEEEEEEEECTTSCCEEEEEEEEEG-GGTEEEEECC-EEECCTTCC---------HHHHHHHHHHHHHCCCCEE----
T ss_pred CCEEEEEEEEeCCCCCcEEEEEEeecC-CCCCcEEECC-ccccCCCCC---------HHHHHHHHHHHHhCCCccc----
Confidence 446666544 32 247877653211 1246799998 999999999 8999999999999998753
Q ss_pred ceeeeEEEEEEcCCCCCCcceEEEEEEEEEec---C-----cCCCCccccccEEEEcHHHHHHHHHh
Q 022053 198 EFTPLGRILYKAPSDGKWGEHELDYLLFIVRD---V-----SVNPNPDEVAEYKYVNREQLKELLRK 256 (303)
Q Consensus 198 ~l~~l~~i~y~~~~~~~~~ehei~~vf~~~~d---~-----~i~~~~~EV~~~~Wvs~eEL~~ll~~ 256 (303)
+..++.+ |..+ ++. ++..++|++..+ . ...++++|+.+++|++++|+.+++..
T Consensus 126 -~~~l~~~-~~~~---~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~ 186 (212)
T 2dsc_A 126 -AECSPAV-CMDP---GLS-NCTIHIVTVTINGDDAENARPKPKPGDGEFVEVISLPKNDLLQRLDA 186 (212)
T ss_dssp -EEECCCE-ESCT---TTB-CCEEEEEEEEEETTSGGGSSCCCCCCTTCCCEEEEEEGGGHHHHHHH
T ss_pred -eEEeccE-EcCC---Ccc-CceEEEEEEEEeCccccccCCCCCCCCCceEEEEEEEHHHHHHHHHh
Confidence 2334333 3332 222 345566666532 1 33567789999999999999999873
No 67
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=99.51 E-value=1.1e-13 Score=131.92 Aligned_cols=119 Identities=15% Similarity=0.133 Sum_probs=78.3
Q ss_pred eCCCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCceeeeEEEEEEcC
Q 022053 131 NSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAP 210 (303)
Q Consensus 131 n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~l~~l~~i~y~~~ 210 (303)
+.+.+|||.+|.. .|.|.+| ||++++||+ +++||+||++|||||.+... .+++.+.|..+
T Consensus 35 ~~~~~vLLv~r~~-----~g~W~lP-gG~ve~gEs---------~~~AA~REl~EEtGl~~~~~-----~~l~~~~~~~~ 94 (364)
T 3fjy_A 35 LDSIEVCIVHRPK-----YDDWSWP-KGKLEQNET---------HRHAAVREIGEETGSPVKLG-----PYLCEVEYPLS 94 (364)
T ss_dssp HTTEEEEEEEETT-----TTEEECC-EEECCTTCC---------HHHHHHHHHHHHHSCCEEEE-----EEEEEEC----
T ss_pred CCceEEEEEEcCC-----CCCEECC-cCCCCCCCC---------HHHHHHHHHHHHhCCeeeec-----cccceEEEecc
Confidence 3445899999843 3899998 999999999 89999999999999987632 34555555444
Q ss_pred CCCCCc--------ceEEEEEEEEEecC-c------------CCCCccccccEEEEcHHHHHHHHHhccCCCCCcccCHH
Q 022053 211 SDGKWG--------EHELDYLLFIVRDV-S------------VNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPW 269 (303)
Q Consensus 211 ~~~~~~--------ehei~~vf~~~~d~-~------------i~~~~~EV~~~~Wvs~eEL~~ll~~~~~~~~~~~ftPw 269 (303)
..+.+. .+...++|.+.... . ..++++|+.+++|++++++.+++ ..|.
T Consensus 95 ~~g~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~-----------~~~~ 163 (364)
T 3fjy_A 95 EEGKKTRHSHDCTADTKHTLYWMAQPISADDAEHLLDAFGPVHRADVGEINDIVWVSVREARKIL-----------SHST 163 (364)
T ss_dssp -----------------CEEEEEEEECCHHHHHTTHHHHCCCCCCCTTTCCEEEEEEHHHHHHHC-----------SCHH
T ss_pred CCCcccccccccccCceEEEEEEEEecCCccccccccccCccccCCccceeeeecCcHHHHHHHh-----------cchh
Confidence 322111 13444556655421 1 13566899999999999998864 3456
Q ss_pred HHHHHHHHHHH
Q 022053 270 FRLVVDNFLFK 280 (303)
Q Consensus 270 ~~~i~~~~l~~ 280 (303)
.+.+++.++..
T Consensus 164 ~r~il~~~~~~ 174 (364)
T 3fjy_A 164 DKDTLAVFVDR 174 (364)
T ss_dssp HHHHHHHHHHH
T ss_pred hHHHHHHHHHH
Confidence 67777766433
No 68
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=99.49 E-value=9.1e-14 Score=128.25 Aligned_cols=150 Identities=15% Similarity=0.155 Sum_probs=96.3
Q ss_pred eeEEEEEEEEe--C---CCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCC
Q 022053 121 LHRAFSVFLFN--S---KYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVP 195 (303)
Q Consensus 121 ~Hravsv~I~n--~---~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~ 195 (303)
.+.++.++|+. . +++|||++|... .++|.|.+| ||++++||+ +++||+||++||||+.+..
T Consensus 38 p~v~v~~vv~~~~~~~~~~~VLLv~R~~~--p~~g~W~lP-GG~ve~gEs---------~~~AA~REl~EEtGl~v~~-- 103 (273)
T 2fml_A 38 PSLTVDMVLLCYNKEADQLKVLLIQRKGH--PFRNSWALP-GGFVNRNES---------TEDSVLRETKEETGVVISQ-- 103 (273)
T ss_dssp CEEEEEEEEEEEETTTTEEEEEEEEECSS--SSTTCEECC-EEECCTTSC---------HHHHHHHHHHHHHCCCCCG--
T ss_pred CceEEEEEEEEEcCCCCCcEEEEEEccCC--CCCCcEECC-ccCCCCCcC---------HHHHHHHHHHHHHCCCCCc--
Confidence 45566666654 2 348999999865 478999998 999999999 8999999999999987652
Q ss_pred CCceeeeEEEEEEcCCCCCCcceEEEEEEEEEecCcCCCCccccccEEEEcHHHHHHHHHhccC------------CCCC
Q 022053 196 VDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADA------------GEEG 263 (303)
Q Consensus 196 ~~~l~~l~~i~y~~~~~~~~~ehei~~vf~~~~d~~i~~~~~EV~~~~Wvs~eEL~~ll~~~~~------------~~~~ 263 (303)
..+..++.+ ..+.... ..+.+.++|++..........+|+.+++|++++++.+++..+.. .-..
T Consensus 104 -~~l~~l~~~--~~~~r~~-~~~~~~~~y~a~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~e~~~l~~~~~~~~~~~~ 179 (273)
T 2fml_A 104 -ENIEQLHSF--SRPDRDP-RGWVVTVSYLAFIGEEPLIAGDDAKEVHWFNLERHGQHITLSHEDVEITLDLKTAASLGK 179 (273)
T ss_dssp -GGEEEEEEE--CCTTSST-TSSEEEEEEEEECCCCCCCCCTTEEEEEEEEEEEETTEEEEEETTEEEEEETTTCCBCSS
T ss_pred -CcEEEEEEE--cCCCCCC-CceEEEEEEEEEeCCCCCCCCcceeeEEEEEhhHhhhhhccccchhhhccccccccccCC
Confidence 234445443 3332111 12456666766653332345578999999999987665422110 0001
Q ss_pred cccCHHHHHHHHHHHHHHHHHhccc
Q 022053 264 LKLSPWFRLVVDNFLFKWWDHLEKG 288 (303)
Q Consensus 264 ~~ftPw~~~i~~~~l~~ww~~~~~~ 288 (303)
..+.--...|+..++.+-..++...
T Consensus 180 ~~LafdH~~Il~~al~rlr~kl~y~ 204 (273)
T 2fml_A 180 DTLAFDHSEIIIKAFNRVVDKMEHE 204 (273)
T ss_dssp SCCSTTHHHHHHHHHHHHHHHTTTC
T ss_pred CcccccHHHHHHHHHHHHHHHhcCC
Confidence 2344445667777776666666543
No 69
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=99.48 E-value=1.8e-13 Score=131.32 Aligned_cols=120 Identities=10% Similarity=0.031 Sum_probs=86.2
Q ss_pred eeEEEEEEEEeCCCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCcee
Q 022053 121 LHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFT 200 (303)
Q Consensus 121 ~Hravsv~I~n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~l~ 200 (303)
...++.++|+|.+|+|||+||... ..++|+|++| ||+++.| + +++|++||+.||||+.+... .
T Consensus 239 ~~~~~~~vi~~~~g~vLL~rR~~~-g~~~GlWefP-GG~ve~g-t---------~~~al~REl~EE~Gl~v~~~-----~ 301 (369)
T 3fsp_A 239 QVPLAVAVLADDEGRVLIRKRDST-GLLANLWEFP-SCETDGA-D---------GKEKLEQMVGEQYGLQVELT-----E 301 (369)
T ss_dssp EEEEEEEEEECSSSEEEEEECCSS-STTTTCEECC-EEECSSS-C---------THHHHHHHHTTSSSCCEEEC-----C
T ss_pred eEEEEEEEEEeCCCEEEEEECCCC-CCcCCcccCC-CcccCCC-C---------cHHHHHHHHHHHhCCceeee-----c
Confidence 344556667788899999999864 4589999999 9999999 8 79999999999999998643 2
Q ss_pred eeEEEEEEcCCCCCCcceEEEEEEEEEecCcCCCCccccccEEEEcHHHHHHHHHhccCCCCCcccCHHHHHHHHHH
Q 022053 201 PLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNF 277 (303)
Q Consensus 201 ~l~~i~y~~~~~~~~~ehei~~vf~~~~d~~i~~~~~EV~~~~Wvs~eEL~~ll~~~~~~~~~~~ftPw~~~i~~~~ 277 (303)
+++.+.+..+. .+...++|.+..... ..|..+++|++++++.++ .+.+.++.+++.+
T Consensus 302 ~l~~~~h~~~h-----~~~~~~~~~~~~~~~----~~e~~~~~Wv~~~el~~~-----------~l~~~~~~il~~l 358 (369)
T 3fsp_A 302 PIVSFEHAFSH-----LVWQLTVFPGRLVHG----GPVEEPYRLAPEDELKAY-----------AFPVSHQRVWREY 358 (369)
T ss_dssp CCCEEEEECSS-----EEEEEEEEEEEECCS----SCCCTTEEEEEGGGGGGS-----------CCCHHHHHHHHHH
T ss_pred ccccEEEEcce-----EEEEEEEEEEEEcCC----CCCccccEEeeHHHhhhC-----------CCCHHHHHHHHHH
Confidence 34444443321 122234455544322 468899999999998652 5677777777655
No 70
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=99.47 E-value=8e-14 Score=128.80 Aligned_cols=109 Identities=12% Similarity=0.060 Sum_probs=73.4
Q ss_pred EEEEEEEEeC-CCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCceee
Q 022053 123 RAFSVFLFNS-KYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTP 201 (303)
Q Consensus 123 ravsv~I~n~-~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~l~~ 201 (303)
.+++++|++. +|++||+||.. .||.|.+| ||++++||+ +++||+||++||||+.+..+. .
T Consensus 102 ~~v~avv~~~~~~~vLLv~r~~----~~g~W~lP-gG~ve~gEs---------~~eAA~REl~EEtGl~~~~l~-----~ 162 (271)
T 2a6t_A 102 PVRGAIMLDMSMQQCVLVKGWK----ASSGWGFP-KGKIDKDES---------DVDCAIREVYEETGFDCSSRI-----N 162 (271)
T ss_dssp CEEEEEEBCSSSSEEEEEEESS----TTCCCBCS-EEECCTTCC---------HHHHHHHHHHHHHCCCCTTTC-----C
T ss_pred CeEEEEEEECCCCEEEEEEEeC----CCCeEECC-cccCCCCcC---------HHHHHHHHHHHHhCCCceeee-----e
Confidence 4677888886 48999999864 37999998 999999999 899999999999999987421 1
Q ss_pred eEEEEEEcCCCCCCcceEEEEEEEEEec---CcCCC-CccccccEEEEcHHHHHHHHHh
Q 022053 202 LGRILYKAPSDGKWGEHELDYLLFIVRD---VSVNP-NPDEVAEYKYVNREQLKELLRK 256 (303)
Q Consensus 202 l~~i~y~~~~~~~~~ehei~~vf~~~~d---~~i~~-~~~EV~~~~Wvs~eEL~~ll~~ 256 (303)
+. .|..+. .. ++..++|++... ....+ +++|+.+++|++++|+.++...
T Consensus 163 ~~--~~~~~~---~~-~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~ 215 (271)
T 2a6t_A 163 PN--EFIDMT---IR-GQNVRLYIIPGISLDTRFESRTRKEISKIEWHNLMDLPTFKKN 215 (271)
T ss_dssp TT--CEEEEE---ET-TEEEEEEEECCCCTTCCCC------EEEEEEEEGGGSTTCC--
T ss_pred ee--eeccCC---cC-CceEEEEEEEEecCcccCCCCCccceeEEEEEEHHHHHHHHhc
Confidence 11 122111 11 234555665431 22233 5689999999999999876443
No 71
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=99.45 E-value=2.4e-14 Score=127.13 Aligned_cols=102 Identities=19% Similarity=0.119 Sum_probs=74.1
Q ss_pred EEeCCCeEEEEEecCCCCcCCCceecccCccCCCCC-ChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCceeeeEEEEE
Q 022053 129 LFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRE-SELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILY 207 (303)
Q Consensus 129 I~n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gE-s~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~l~~l~~i~y 207 (303)
+++.++++||+|| ++|.|.+| ||++++|| + +++||+||++||||+.+....+..+.+++.+.+
T Consensus 51 i~~~~~~vLl~~r------~~g~w~~P-GG~ve~gE~t---------~~~aa~REl~EEtGl~~~~~~l~~~~~~~~~~~ 114 (212)
T 1u20_A 51 RVPIRRVLLMMMR------FDGRLGFP-GGFVDTRDIS---------LEEGLKRELEEELGPALATVEVTEDDYRSSQVR 114 (212)
T ss_dssp TEECCEEEEEEEE------TTSCEECS-EEEECTTTSC---------HHHHHHHHHHHHHCGGGGGCCCCGGGEEEEEEE
T ss_pred EEecCCEEEEEEe------CCCeEECC-CcccCCCCCC---------HHHHHHHHHHHHHCCCccccceeeeeEEEeccc
Confidence 3466779999998 47999998 99999999 9 899999999999999987443212235666555
Q ss_pred EcCCCCCCcceEEEEEEEEEec-CcC----------CCCccccccEEEEcHHHHHH
Q 022053 208 KAPSDGKWGEHELDYLLFIVRD-VSV----------NPNPDEVAEYKYVNREQLKE 252 (303)
Q Consensus 208 ~~~~~~~~~ehei~~vf~~~~d-~~i----------~~~~~EV~~~~Wvs~eEL~~ 252 (303)
..+ .+...++|.+... ..+ ..+++|+.++.|++++++.+
T Consensus 115 ~~~------~~~~~~~f~~~~~~~~~~~~e~~~~~~~~~~~Ev~~~~wvpl~el~~ 164 (212)
T 1u20_A 115 EHP------QKCVTHFYIKELKLEEIERIEAEAVNAKDHGLEVMGLIRVPLYTLRD 164 (212)
T ss_dssp CTT------SCEEEEEEEEECCHHHHHHHHHHHTTSTTBTTTEEEEEECCCSBCTT
T ss_pred cCC------CcEEEEEEEEEecCCCcccccccccccccCCcceEEEEEEEHHHhhh
Confidence 432 1455667777642 111 23457899999999999855
No 72
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.44 E-value=2.7e-12 Score=116.41 Aligned_cols=147 Identities=14% Similarity=0.137 Sum_probs=96.1
Q ss_pred eeEEEEEEEEeC-CC--eEEEEEecCCCCcCCCceecccCccCCCCCChh-----------hhhhhhcHHHHHHHHHHHH
Q 022053 121 LHRAFSVFLFNS-KY--ELLLQQRSGTKVTFPLVWTNTCCSHPLYRESEL-----------IEENALGVRNAAQRKLLDE 186 (303)
Q Consensus 121 ~Hravsv~I~n~-~g--~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l-----------~~~~~~g~~eAA~REL~EE 186 (303)
.+.|+.+++.+. +| +|||+||+.....+||.|.+| ||+++++|+.+ .......+..||+||++||
T Consensus 8 r~aA~lill~~~~~g~~~vLl~~R~~~~~~~~g~~~fP-GG~vd~~d~~~~~~~~g~~~~~~~~~~~a~~~aAiRE~~EE 86 (232)
T 3qsj_A 8 RKAATLVVIRDGANKDIEVLVVRRAKTMRFLPGFVAFP-GGAADPSDAEMAKRAFGRPVCAEDDDDPALAVTALRETAEE 86 (232)
T ss_dssp EEEEEEEEEEECGGGCEEEEEEEECTTCSSSTTCEECS-EEECCHHHHHHHHTCBSCCBTCCSTTHHHHHHHHHHHHHHH
T ss_pred cceEEEEEEEcCCCCCeEEEEEEccCCCCCCCCcEECC-ceeEecCCCCchhhhcccccccccchhhHHHHHHHHHHHHH
Confidence 444554555543 33 899999998887789999998 99999998720 0111223589999999999
Q ss_pred hCCCcccCC-------------------------------------CCceeeeEEEEEEcCCCCCCcceEEEE-EEEEEe
Q 022053 187 LGICAEDVP-------------------------------------VDEFTPLGRILYKAPSDGKWGEHELDY-LLFIVR 228 (303)
Q Consensus 187 lGI~~~~~~-------------------------------------~~~l~~l~~i~y~~~~~~~~~ehei~~-vf~~~~ 228 (303)
+||.+.... ++.|.++.+ +..|... .+.++. +|++..
T Consensus 87 ~Gl~l~~~~~~~~~~~~~~~~~~r~~l~~~~~~f~~~~~~~~l~~~~~~L~~~ar--WiTP~~~---~rRfdT~FFla~l 161 (232)
T 3qsj_A 87 IGWLLAVRDGEGTKMDTPLAPDEQADLCKGGDALSAWLSARGLAFDLGLLRRIGR--FVTPPTQ---PVRFDTRFFLCVG 161 (232)
T ss_dssp HSCCCSEECTTCCBCCSCCCHHHHHHHTTCTTHHHHHHHTTTCEEBGGGCEEEEE--EECCTTS---SSEEEEEEEEEEC
T ss_pred hCceeccccccCcccChhhHHHHHHHHHcCchhHHHHHHHCCCccChhhceeeEE--EcCCcCC---ceeEEEEEEEEEC
Confidence 999753210 122333333 3334322 144554 344444
Q ss_pred cCc--CCCCccccccEEEEcHHHHHHHHHhccCCCCCcccCHHHHHHHHHHH
Q 022053 229 DVS--VNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFL 278 (303)
Q Consensus 229 d~~--i~~~~~EV~~~~Wvs~eEL~~ll~~~~~~~~~~~ftPw~~~i~~~~l 278 (303)
+.. +..+.+|+.++.|++++|+.+....+ ...+.|-...++..+.
T Consensus 162 pq~~~v~~d~~E~~~~~W~~p~eal~~~~~G-----~i~L~pPT~~~L~~L~ 208 (232)
T 3qsj_A 162 QHLGEPRLHGAELDAALWTPARDMLTRIQSG-----ELPAVRPTIAVLKALV 208 (232)
T ss_dssp SSCCCCCCCSSSEEEEEEEEHHHHHHHHHTT-----SSCCCHHHHHHHHHHH
T ss_pred CCCCCCCCCCCceEEEEEEcHHHHHHHHHcC-----CceechhHHHHHHHHH
Confidence 422 35678999999999999999988874 2467776666666553
No 73
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=99.21 E-value=7.1e-11 Score=110.12 Aligned_cols=118 Identities=11% Similarity=0.039 Sum_probs=70.7
Q ss_pred eEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCccc---------CCCCceeee-EE
Q 022053 135 ELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAED---------VPVDEFTPL-GR 204 (303)
Q Consensus 135 ~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~~~~---------~~~~~l~~l-~~ 204 (303)
++||+||.. .|.|.+| ||++++||+ +.+||+|||+||||+.+.. +.+.++... +.
T Consensus 140 ~vLl~~r~~-----~g~W~lP-GG~Ve~GEs---------~~eAA~REl~EETGl~~~~~~~~~~~l~~~l~~l~~~~g~ 204 (292)
T 1q33_A 140 QFVAIKRKD-----CGEWAIP-GGMVDPGEK---------ISATLKREFGEEALNSLQKTSAEKREIEEKLHKLFSQDHL 204 (292)
T ss_dssp EEEEEECTT-----TCSEECC-CEECCTTCC---------HHHHHHHHHHHHHSCGGGSCSSHHHHHHHHHHHHTTTSEE
T ss_pred EEEEEEecC-----CCcEeCC-CcccCCCCC---------HHHHHHHHHHHHhCCccccccccchhhHHHHHHHhhcccc
Confidence 699999874 3899998 999999999 8999999999999998421 001122111 22
Q ss_pred EEEEcCCC-CCC--cceEEEEEEEEEe-cCc-----CCCCccccccEEEEcHHHHHHHHHhccCCCCCcccCHHHHHHHH
Q 022053 205 ILYKAPSD-GKW--GEHELDYLLFIVR-DVS-----VNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVD 275 (303)
Q Consensus 205 i~y~~~~~-~~~--~ehei~~vf~~~~-d~~-----i~~~~~EV~~~~Wvs~eEL~~ll~~~~~~~~~~~ftPw~~~i~~ 275 (303)
..|..+.. ..- ..+.+..+|.+.. ... .....+|+.+++|++++++.+ +.+..+.+++
T Consensus 205 ~vy~~~~~dpr~~d~~~~~~~~f~~~~~~g~~~~~~~~~~~~E~~~~~W~~~del~~-------------L~~~h~~il~ 271 (292)
T 1q33_A 205 VIYKGYVDDPRNTDNAWMETEAVNYHDETGEIMDNLMLEAGDDAGKVKWVDINDKLK-------------LYASHSQFIK 271 (292)
T ss_dssp EEEEEECCCTTCCSSEEEEEEEEEEEESSSTTTTTCCCCCCTTCSEEEEEECCTTCC-------------CSTTHHHHHH
T ss_pred eeecccccCCCCCcccEEEEEEEEEEeCCCccccccccCCCCccceEEEEEcccCcc-------------cCHhHHHHHH
Confidence 23332111 000 0122233343332 121 113457899999999999743 3445566666
Q ss_pred HHHHH
Q 022053 276 NFLFK 280 (303)
Q Consensus 276 ~~l~~ 280 (303)
.++..
T Consensus 272 ~~~~~ 276 (292)
T 1q33_A 272 LVAEK 276 (292)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66543
No 74
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=99.15 E-value=2.8e-11 Score=108.27 Aligned_cols=95 Identities=18% Similarity=0.106 Sum_probs=64.5
Q ss_pred CeEEEEEecCCCCcCCCceecccCccCCCCC-ChhhhhhhhcHHHHHHHHHHHHhCCCcccCCCCceeeeEEEEEEcCCC
Q 022053 134 YELLLQQRSGTKVTFPLVWTNTCCSHPLYRE-SELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSD 212 (303)
Q Consensus 134 g~lLLqqRs~~K~~~PG~W~~p~gGhve~gE-s~l~~~~~~g~~eAA~REL~EElGI~~~~~~~~~l~~l~~i~y~~~~~ 212 (303)
+++||++|. +|.|++| ||++++|| + +++||+||++||||+.+....+..+.++.. +. ..
T Consensus 65 ~~~ll~~r~------~g~w~lP-GG~ve~gE~t---------~~eaa~REl~EEtGl~~~~~~l~~l~~~~~--~~--~~ 124 (217)
T 2xsq_A 65 YAILMQMRF------DGRLGFP-GGFVDTQDRS---------LEDGLNRELREELGEAAAAFRVERTDYRSS--HV--GS 124 (217)
T ss_dssp EEEEEEEET------TSCEECS-EEECCTTCSS---------HHHHHHHHHHHHHCGGGGGCCCCGGGEEEE--EE--CS
T ss_pred CcEEEEEcc------CCeEECC-ceecCCCCCC---------HHHHHHHHHHHHHCCCCccceeEEEEEEee--cC--CC
Confidence 357777764 6899998 99999999 9 899999999999999987322222222222 11 11
Q ss_pred CCCcceEEEEEEEEEec-CcC----------CCCccccccEEEEcHHHHH
Q 022053 213 GKWGEHELDYLLFIVRD-VSV----------NPNPDEVAEYKYVNREQLK 251 (303)
Q Consensus 213 ~~~~ehei~~vf~~~~d-~~i----------~~~~~EV~~~~Wvs~eEL~ 251 (303)
..+.+.++|.+... ..+ ..+.+|+.++.|+++++|.
T Consensus 125 ---~~~~~~~~f~~~l~~~~~~~~e~~~~~~~~~~~E~~~v~~vPl~~l~ 171 (217)
T 2xsq_A 125 ---GPRVVAHFYAKRLTLEELLAVEAGATRAKDHGLEVLGLVRVPLYTLR 171 (217)
T ss_dssp ---SSSEEEEEEEEECCHHHHHHHHHHGGGSTTBTTTEEEEEECCCSBCT
T ss_pred ---CCeEEEEEEEEEeccccceecccccccccccCCceeeEEEEEHHHhh
Confidence 11456666666542 112 3345789999999999874
No 75
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=98.60 E-value=4.1e-08 Score=86.83 Aligned_cols=103 Identities=17% Similarity=0.052 Sum_probs=64.3
Q ss_pred eeEEEEEEEEeCC-C----------eEEEEEecCCCCcCCCceecccCccCCCCC-ChhhhhhhhcHHHHHHHHHHHHhC
Q 022053 121 LHRAFSVFLFNSK-Y----------ELLLQQRSGTKVTFPLVWTNTCCSHPLYRE-SELIEENALGVRNAAQRKLLDELG 188 (303)
Q Consensus 121 ~Hravsv~I~n~~-g----------~lLLqqRs~~K~~~PG~W~~p~gGhve~gE-s~l~~~~~~g~~eAA~REL~EElG 188 (303)
+..|++++++.++ + .||||.|- .|.|++| ||++++|| + +++|+.|||.||+|
T Consensus 20 ~~hach~mlya~~~~~lfg~~p~r~~iLmQ~R~------~G~weFP-GGkVe~gE~t---------~e~aL~REl~EElg 83 (214)
T 3kvh_A 20 WSHSCHAMLYAANPGQLFGRIPMRFSVLMQMRF------DGLLGFP-GGFVDRRFWS---------LEDGLNRVLGLGLG 83 (214)
T ss_dssp CEEEEEEEEEEEEEEEETTTEEEEEEEEEEEET------TSCEECS-EEEECTTTCC---------HHHHHHHSCCSCC-
T ss_pred ccEeeEEEEEcCCccccccccchhheEEEeeee------CCEEeCC-CccCCCCCCC---------HHHHHHHHHHHhhC
Confidence 6778888887654 2 37888874 5999999 99999999 7 89999999999999
Q ss_pred C-CcccCCCCceeeeEEEEEEcCCCCCCcceEEEEEEEEEec-Cc--------CC-CC-ccccccEEEEcHHHH
Q 022053 189 I-CAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRD-VS--------VN-PN-PDEVAEYKYVNREQL 250 (303)
Q Consensus 189 I-~~~~~~~~~l~~l~~i~y~~~~~~~~~ehei~~vf~~~~d-~~--------i~-~~-~~EV~~~~Wvs~eEL 250 (303)
+ .+.. ..++..+.+..+ .+-..++|.+... ++ +. -+ .-||....-|++=.+
T Consensus 84 ~~~V~~-----~~y~~s~~~~yp------~~V~LHfY~crl~~Ge~~~lE~~A~~A~d~G~EvlGlvRVPlytl 146 (214)
T 3kvh_A 84 CLRLTE-----ADYLSSHLTEGP------HRVVAHLYARQLTLEQLHAVEISAVHSRDHGLEVLGLVRVPLYTQ 146 (214)
T ss_dssp --CCCG-----GGEEEEEEC----------CEEEEEEEEECCHHHHHHHHHHHHTSTTBTTTEEEEEEECCCBC
T ss_pred Ceeeee-----eeeEEEEeccCC------CEEEEEEEEEEeeCCccchhhhcccCCcccCceecceEEeeeEEe
Confidence 7 3432 234444433322 1234466766531 11 11 11 246777777775443
No 76
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=98.50 E-value=5.1e-07 Score=85.34 Aligned_cols=108 Identities=11% Similarity=0.086 Sum_probs=69.0
Q ss_pred EEEEEEEEeCCCeEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHh-CCCcccCCCCceee
Q 022053 123 RAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDEL-GICAEDVPVDEFTP 201 (303)
Q Consensus 123 ravsv~I~n~~g~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EEl-GI~~~~~~~~~l~~ 201 (303)
.+++++|.+ +|+|||+ . -.| |.+| ||.++.++ .++|+||++||+ |+.++. ..
T Consensus 184 ~~vgaii~~-~g~vLL~--~-----~~G-W~LP-G~~~~~~~-----------~~~a~RE~~EEttGl~v~~------~~ 236 (321)
T 3rh7_A 184 IRLGAVLEQ-QGAVFLA--G-----NET-LSLP-NCTVEGGD-----------PARTLAAYLEQLTGLNVTI------GF 236 (321)
T ss_dssp EEEEEEEES-SSCEEEB--C-----SSE-EBCC-EEEESSSC-----------HHHHHHHHHHHHHSSCEEE------EE
T ss_pred ceEEEEEEE-CCEEEEe--e-----CCC-ccCC-cccCCCCh-----------hHHHHHHHHHHhcCCEEee------ce
Confidence 346666665 6999998 1 137 9999 77654444 359999999997 999873 23
Q ss_pred eEEEEEEcCCCCCCcceEEEEEEEEEecCcCCCCccccccEEEEcHHHHHHHHHhccCCCCCcccCHHHHHHHHHHHH
Q 022053 202 LGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLF 279 (303)
Q Consensus 202 l~~i~y~~~~~~~~~ehei~~vf~~~~d~~i~~~~~EV~~~~Wvs~eEL~~ll~~~~~~~~~~~ftPw~~~i~~~~l~ 279 (303)
+..+ |..+.. +....+|.+..... +..+++|++++||..+ ....|-.+..+++|+.
T Consensus 237 L~~v-~~~~~~-----~~~~i~f~~~~~~g------~~~e~~~f~~~elp~~----------~~~~~~~~~~L~~y~~ 292 (321)
T 3rh7_A 237 LYSV-YEDKSD-----GRQNIVYHALASDG------APRQGRFLRPAELAAA----------KFSSSATADIINRFVL 292 (321)
T ss_dssp EEEE-EECTTT-----CCEEEEEEEEECSS------CCSSSEEECHHHHTTC----------EESSHHHHHHHHHHHH
T ss_pred EEEE-EEcCCC-----ceEEEEEEEEeCCC------CeeeeEEECHHHCCCc----------ccCCHHHHHHHHHHHH
Confidence 3333 554432 22222455543211 1377899999999653 1236888888888844
No 77
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=98.36 E-value=6.2e-07 Score=79.73 Aligned_cols=58 Identities=14% Similarity=0.109 Sum_probs=49.4
Q ss_pred cCCceeEEEEEEEEeCCC--eEEEEEecCCCCcCCCceecccCccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCC
Q 022053 117 SLNLLHRAFSVFLFNSKY--ELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGIC 190 (303)
Q Consensus 117 ~~gl~Hravsv~I~n~~g--~lLLqqRs~~K~~~PG~W~~p~gGhve~gEs~l~~~~~~g~~eAA~REL~EElGI~ 190 (303)
+.|+...+.+|++++..+ +|||.|+.. +.|.+| ||.+++||+ .++|++|||.||+|+.
T Consensus 54 ~~g~R~sV~avil~~~~~~phVLLlq~~~------~~f~LP-GGkle~gE~---------~~eaL~REL~EELg~~ 113 (208)
T 3bho_A 54 KIGMRRTVEGVLIVHEHRLPHVLLLQLGT------TFFKLP-GGELNPGED---------EVEGLKRLMTEILGRQ 113 (208)
T ss_dssp HHCSEEEEEEEEEEEETTEEEEEEEEEET------TEEECS-EEECCTTCC---------HHHHHHHHHHHHHCCC
T ss_pred hhCCceEEEEEEEEcCCCCcEEEEEEcCC------CcEECC-CcccCCCCC---------HHHHHHHHHHHHhCCC
Confidence 468888888888887766 688888753 489998 999999999 7999999999999973
No 78
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=35.68 E-value=24 Score=28.22 Aligned_cols=30 Identities=20% Similarity=0.135 Sum_probs=21.3
Q ss_pred HHHHHhhhcCeEEEEcCCCcEEeeeecccc
Q 022053 80 AVQRRLMFEDECILVDENDRVVGHENKYNC 109 (303)
Q Consensus 80 ~~q~~lm~eE~~~vvDe~d~~iG~~tr~~~ 109 (303)
+.-..+.+...++|||++|+++|..++.++
T Consensus 107 ~~~~~m~~~~~lpVVd~~g~l~GiiT~~Di 136 (156)
T 3k6e_A 107 EVLHKLVDESFLPVVDAEGIFQGIITRKSI 136 (156)
T ss_dssp HHHHHTTTSSEEEEECTTSBEEEEEEHHHH
T ss_pred HHHHHHHHcCCeEEEecCCEEEEEEEHHHH
Confidence 333333333347899999999999999874
No 79
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=32.87 E-value=35 Score=26.54 Aligned_cols=25 Identities=20% Similarity=0.094 Sum_probs=19.6
Q ss_pred hhhcCeEEEEcCCCcEEeeeecccc
Q 022053 85 LMFEDECILVDENDRVVGHENKYNC 109 (303)
Q Consensus 85 lm~eE~~~vvDe~d~~iG~~tr~~~ 109 (303)
+.....++|+|++|+++|..++.+.
T Consensus 112 ~~~~~~lpVvd~~g~~~Giit~~di 136 (156)
T 3ctu_A 112 LVDESFLPVVDAEGIFQGIITRKSI 136 (156)
T ss_dssp TTTSSEEEEECTTSBEEEEEETTHH
T ss_pred HHHcCeEEEEcCCCeEEEEEEHHHH
Confidence 3333468899999999999998864
No 80
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=28.59 E-value=37 Score=26.11 Aligned_cols=32 Identities=9% Similarity=-0.032 Sum_probs=22.2
Q ss_pred CCHHHHHhhhcCeEEEEcCCCcEEeeeecccc
Q 022053 78 MDAVQRRLMFEDECILVDENDRVVGHENKYNC 109 (303)
Q Consensus 78 ~d~~q~~lm~eE~~~vvDe~d~~iG~~tr~~~ 109 (303)
+.+.-..+.....++|+|++|+++|..++.+.
T Consensus 106 l~~a~~~~~~~~~l~Vvd~~g~~~Giit~~di 137 (150)
T 3lqn_A 106 FAKALEMTIDHPFICAVNEDGYFEGILTRRAI 137 (150)
T ss_dssp HHHHHHHHHHCSEEEEECTTCBEEEEEEHHHH
T ss_pred HHHHHHHHHhCCEEEEECCCCcEEEEEEHHHH
Confidence 33333334434458899999999999988764
No 81
>1zxu_A AT5G01750 protein; PFAM PF01167, TULP, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 1.70A {Arabidopsis thaliana} SCOP: d.23.1.2 PDB: 2q4m_A
Probab=28.58 E-value=66 Score=27.46 Aligned_cols=55 Identities=11% Similarity=0.087 Sum_probs=33.0
Q ss_pred cCeEEEEcCCCcEEeeeeccccchhhhhccCCceeEEEEEEEEeCCCeEEEEEecCCCCcCCCceecc
Q 022053 88 EDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNT 155 (303)
Q Consensus 88 eE~~~vvDe~d~~iG~~tr~~~H~~~~i~~~gl~Hravsv~I~n~~g~lLLqqRs~~K~~~PG~W~~p 155 (303)
+..+.|+|++|+.+..+.-+.+ .+...+.|.|..|+.|+.-|.. ...+-..|+.-
T Consensus 51 ~~~f~V~D~~G~~vf~V~~~~~------------~~~~~~~l~D~~G~~l~~i~rk-~~~~~~~~~v~ 105 (217)
T 1zxu_A 51 DGNFVITDVNGNLLFKVKEPVF------------GLHDKRVLLDGSGTPVVTLREK-MVSMHDRWQVF 105 (217)
T ss_dssp CCCEEEEETTSCEEEEEECSST------------TCCSEEEEECTTSCEEEEEEC-------CEEEEE
T ss_pred CCCEEEEeCCCCEEEEEEcccc------------CCCCEEEEECCCCCEEEEEEcc-ccccCcEEEEE
Confidence 3379999999999998743321 1223567789889766654432 22455778764
No 82
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=27.66 E-value=39 Score=26.39 Aligned_cols=33 Identities=3% Similarity=-0.112 Sum_probs=23.1
Q ss_pred CCCHHHHHhhhcCeEEEEcCCCcEEeeeecccc
Q 022053 77 GMDAVQRRLMFEDECILVDENDRVVGHENKYNC 109 (303)
Q Consensus 77 ~~d~~q~~lm~eE~~~vvDe~d~~iG~~tr~~~ 109 (303)
.+.+....+.....++|+|++|+++|..++.++
T Consensus 104 ~l~~a~~~m~~~~~lpVvd~~g~~vGiit~~di 136 (159)
T 1yav_A 104 PIMKGFGMVINNGFVCVENDEQVFEGIFTRRVV 136 (159)
T ss_dssp BHHHHHHHTTTCSEEEEECTTCBEEEEEEHHHH
T ss_pred CHHHHHHHHHhCCEEEEEeCCCeEEEEEEHHHH
Confidence 344444444444458899999999999998764
No 83
>3zv0_C H/ACA ribonucleoprotein complex subunit 4; cell cycle, RNP assembly, X-linked dyskeratosis congenita; 2.80A {Saccharomyces cerevisiae}
Probab=25.94 E-value=1.1e+02 Score=26.54 Aligned_cols=51 Identities=14% Similarity=0.204 Sum_probs=31.4
Q ss_pred cCeEEEEcCCCcEEeee-eccccchhhhhccCCceeEEEEEEEEeCCCeEEEEEe-cCCCCcCCCceec
Q 022053 88 EDECILVDENDRVVGHE-NKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQR-SGTKVTFPLVWTN 154 (303)
Q Consensus 88 eE~~~vvDe~d~~iG~~-tr~~~H~~~~i~~~gl~Hravsv~I~n~~g~lLLqqR-s~~K~~~PG~W~~ 154 (303)
.+.+.|+|++|+++|.+ ..... ..+.. ..+|.+.-.+| -.+..+||-+|.+
T Consensus 109 GD~V~V~~~~G~~IAvG~a~~sS---~Ei~~-------------~~kG~aVkv~rVimd~~~Yp~~W~~ 161 (195)
T 3zv0_C 109 YDEIVLITTKGEAIAVAIAQMST---VDLAS-------------CDHGVVASVKRCIMERDLYPRRWGL 161 (195)
T ss_dssp TCEEEEECTTCCEEEEEEESSCH---HHHHH-------------CSSSEEEEEEEECBCTTSSCCCCSS
T ss_pred CCEEEEEcCCCCEEEEEEEcCCH---HHHhh-------------cCCcEEEEEEEEEeCCCCcCccccc
Confidence 46799999999998875 33221 12211 12454444444 3467799999987
No 84
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=25.80 E-value=35 Score=25.64 Aligned_cols=20 Identities=25% Similarity=0.257 Sum_probs=17.4
Q ss_pred eEEEEcCCCcEEeeeecccc
Q 022053 90 ECILVDENDRVVGHENKYNC 109 (303)
Q Consensus 90 ~~~vvDe~d~~iG~~tr~~~ 109 (303)
.++|+|++|+++|..++.+.
T Consensus 101 ~lpVvd~~g~~~Giit~~dl 120 (128)
T 3gby_A 101 VVPLADEDGRYEGVVSRKRI 120 (128)
T ss_dssp EEEEECTTCBEEEEEEHHHH
T ss_pred EEEEECCCCCEEEEEEHHHH
Confidence 48999999999999988753
No 85
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=24.63 E-value=46 Score=25.72 Aligned_cols=32 Identities=3% Similarity=-0.007 Sum_probs=22.5
Q ss_pred CCHHHHHhhhcCeEEEEcCCCcEEeeeecccc
Q 022053 78 MDAVQRRLMFEDECILVDENDRVVGHENKYNC 109 (303)
Q Consensus 78 ~d~~q~~lm~eE~~~vvDe~d~~iG~~tr~~~ 109 (303)
+.+.-..+.....++|+|++|+++|..++.+.
T Consensus 102 l~~a~~~m~~~~~l~Vvd~~g~~~Giit~~di 133 (157)
T 2emq_A 102 LMKAVGLIVNHPFVCVENDDGYFAGIFTRREV 133 (157)
T ss_dssp HHHHHHHHHHSSEEEEECSSSSEEEEEEHHHH
T ss_pred HHHHHHHHhhCCEEEEEcCCCeEEEEEEHHHH
Confidence 34444444444448899999999999988764
No 86
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=23.76 E-value=40 Score=25.27 Aligned_cols=20 Identities=25% Similarity=0.230 Sum_probs=17.3
Q ss_pred eEEEEcCCCcEEeeeecccc
Q 022053 90 ECILVDENDRVVGHENKYNC 109 (303)
Q Consensus 90 ~~~vvDe~d~~iG~~tr~~~ 109 (303)
.++|+|++|+++|..++.+.
T Consensus 101 ~lpVvd~~g~~~Giit~~dl 120 (127)
T 3nqr_A 101 MAIVIDEFGGVSGLVTIEDI 120 (127)
T ss_dssp EEEEECTTSCEEEEEEHHHH
T ss_pred EEEEEeCCCCEEEEEEHHHH
Confidence 48899999999999988753
No 87
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=23.30 E-value=43 Score=24.56 Aligned_cols=21 Identities=29% Similarity=0.335 Sum_probs=17.8
Q ss_pred CeEEEEcCCCcEEeeeecccc
Q 022053 89 DECILVDENDRVVGHENKYNC 109 (303)
Q Consensus 89 E~~~vvDe~d~~iG~~tr~~~ 109 (303)
..++|+|++|+++|..++.+.
T Consensus 94 ~~l~Vvd~~g~~~Givt~~dl 114 (122)
T 3kpb_A 94 SGVPVVDDYRRVVGIVTSEDI 114 (122)
T ss_dssp SEEEEECTTCBEEEEEEHHHH
T ss_pred CeEEEECCCCCEEEEEeHHHH
Confidence 358999999999999988753
No 88
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=22.99 E-value=42 Score=25.26 Aligned_cols=20 Identities=25% Similarity=0.290 Sum_probs=17.3
Q ss_pred eEEEEcCCCcEEeeeecccc
Q 022053 90 ECILVDENDRVVGHENKYNC 109 (303)
Q Consensus 90 ~~~vvDe~d~~iG~~tr~~~ 109 (303)
.++|+|++|+++|..++.+.
T Consensus 104 ~~~Vvd~~g~~vGivt~~di 123 (130)
T 3i8n_A 104 LALVVDEYGTVLGLVTLEDI 123 (130)
T ss_dssp EEEEECTTSCEEEEEEHHHH
T ss_pred EEEEEcCCCCEEEEEEHHHH
Confidence 58899999999999988753
No 89
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=22.22 E-value=42 Score=25.63 Aligned_cols=20 Identities=25% Similarity=0.295 Sum_probs=17.5
Q ss_pred eEEEEcCCCcEEeeeecccc
Q 022053 90 ECILVDENDRVVGHENKYNC 109 (303)
Q Consensus 90 ~~~vvDe~d~~iG~~tr~~~ 109 (303)
.++|+|++|+++|..++.++
T Consensus 102 ~~~Vvd~~g~lvGiit~~Di 121 (136)
T 3lfr_A 102 MAIVIDEYGGVAGLVTIEDV 121 (136)
T ss_dssp EEEEECTTSCEEEEEEHHHH
T ss_pred EEEEEeCCCCEEEEEEHHHH
Confidence 58899999999999998764
No 90
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=21.94 E-value=56 Score=25.95 Aligned_cols=20 Identities=25% Similarity=0.320 Sum_probs=17.4
Q ss_pred eEEEEcCCCcEEeeeecccc
Q 022053 90 ECILVDENDRVVGHENKYNC 109 (303)
Q Consensus 90 ~~~vvDe~d~~iG~~tr~~~ 109 (303)
.++|+|++|+++|..+.+++
T Consensus 51 ~~pVvd~~g~lvGiit~~Dl 70 (170)
T 4esy_A 51 CAPVVDQNGHLVGIITESDF 70 (170)
T ss_dssp EEEEECTTSCEEEEEEGGGG
T ss_pred EEEEEcCCccEEEEEEHHHH
Confidence 38999999999999988764
No 91
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=21.62 E-value=46 Score=24.90 Aligned_cols=20 Identities=15% Similarity=0.169 Sum_probs=17.5
Q ss_pred eEEEEcCCCcEEeeeecccc
Q 022053 90 ECILVDENDRVVGHENKYNC 109 (303)
Q Consensus 90 ~~~vvDe~d~~iG~~tr~~~ 109 (303)
.++|+|++|+++|..++.+.
T Consensus 100 ~l~Vvd~~g~~~Giit~~dl 119 (133)
T 2ef7_A 100 HLPVVDDKGNLKGIISIRDI 119 (133)
T ss_dssp EEEEECTTSCEEEEEEHHHH
T ss_pred EEEEECCCCeEEEEEEHHHH
Confidence 48999999999999998764
No 92
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=21.47 E-value=48 Score=26.14 Aligned_cols=20 Identities=20% Similarity=0.346 Sum_probs=17.6
Q ss_pred eEEEEcCCCcEEeeeecccc
Q 022053 90 ECILVDENDRVVGHENKYNC 109 (303)
Q Consensus 90 ~~~vvDe~d~~iG~~tr~~~ 109 (303)
.++|+|++|+++|..++.++
T Consensus 131 ~lpVvd~~g~~vGiit~~di 150 (180)
T 3sl7_A 131 RLPVVDADGKLIGILTRGNV 150 (180)
T ss_dssp EEEEECTTCBEEEEEEHHHH
T ss_pred EEEEECCCCeEEEEEEHHHH
Confidence 48999999999999998864
No 93
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=21.35 E-value=44 Score=25.19 Aligned_cols=20 Identities=20% Similarity=0.313 Sum_probs=16.3
Q ss_pred eEEEEcCCCcEEeeeecccc
Q 022053 90 ECILVDENDRVVGHENKYNC 109 (303)
Q Consensus 90 ~~~vvDe~d~~iG~~tr~~~ 109 (303)
.++|+|++|+++|..++.+.
T Consensus 101 ~~pVvd~~g~~~Giit~~Di 120 (129)
T 3jtf_A 101 LAIVIDEHGGISGLVTMEDV 120 (129)
T ss_dssp EEEEECC-CCEEEEEEHHHH
T ss_pred EEEEEeCCCCEEEEEEHHHH
Confidence 47899999999999988764
No 94
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=21.32 E-value=49 Score=25.13 Aligned_cols=20 Identities=25% Similarity=0.356 Sum_probs=17.4
Q ss_pred eEEEEcCCCcEEeeeecccc
Q 022053 90 ECILVDENDRVVGHENKYNC 109 (303)
Q Consensus 90 ~~~vvDe~d~~iG~~tr~~~ 109 (303)
.++|+|++|+++|..++.+.
T Consensus 118 ~l~Vvd~~g~~~Giit~~di 137 (152)
T 4gqw_A 118 RLPVVDSDGKLVGIITRGNV 137 (152)
T ss_dssp EEEEECTTSBEEEEEEHHHH
T ss_pred EEEEECCCCcEEEEEEHHHH
Confidence 48899999999999988764
No 95
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=21.10 E-value=49 Score=24.93 Aligned_cols=20 Identities=25% Similarity=0.341 Sum_probs=17.4
Q ss_pred eEEEEcCCCcEEeeeecccc
Q 022053 90 ECILVDENDRVVGHENKYNC 109 (303)
Q Consensus 90 ~~~vvDe~d~~iG~~tr~~~ 109 (303)
.++|+|++|+++|..++.+.
T Consensus 116 ~l~Vvd~~g~~~Giit~~di 135 (144)
T 2nyc_A 116 RFFVVDDVGRLVGVLTLSDI 135 (144)
T ss_dssp EEEEECTTSBEEEEEEHHHH
T ss_pred EEEEECCCCCEEEEEEHHHH
Confidence 58999999999999988753
No 96
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=20.51 E-value=48 Score=25.12 Aligned_cols=20 Identities=20% Similarity=0.209 Sum_probs=17.2
Q ss_pred eEEEEcCCCcEEeeeecccc
Q 022053 90 ECILVDENDRVVGHENKYNC 109 (303)
Q Consensus 90 ~~~vvDe~d~~iG~~tr~~~ 109 (303)
.++|+|++|+++|..++.+.
T Consensus 102 ~~~Vvd~~g~lvGiit~~Di 121 (130)
T 3hf7_A 102 VGLVVDEYGDIQGLVTVEDI 121 (130)
T ss_dssp EEEEECTTSCEEEEEEHHHH
T ss_pred EEEEEcCCCCEEEEeeHHHH
Confidence 57889999999999988763
No 97
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=20.33 E-value=48 Score=26.04 Aligned_cols=19 Identities=21% Similarity=0.211 Sum_probs=16.5
Q ss_pred eEEEEcCCCcEEeeeeccc
Q 022053 90 ECILVDENDRVVGHENKYN 108 (303)
Q Consensus 90 ~~~vvDe~d~~iG~~tr~~ 108 (303)
.++|+|++|+++|..++.+
T Consensus 135 ~~~Vvd~~g~~~Givt~~D 153 (156)
T 3oi8_A 135 MAIVIDEYGGTSGLVTFED 153 (156)
T ss_dssp EEEEECTTSSEEEEEEHHH
T ss_pred EEEEECCCCCEEEEEEHHH
Confidence 4889999999999998764
No 98
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=20.07 E-value=51 Score=25.03 Aligned_cols=20 Identities=20% Similarity=0.353 Sum_probs=17.5
Q ss_pred eEEEEcCCCcEEeeeecccc
Q 022053 90 ECILVDENDRVVGHENKYNC 109 (303)
Q Consensus 90 ~~~vvDe~d~~iG~~tr~~~ 109 (303)
.++|+|++|+++|..++.+.
T Consensus 103 ~l~Vvd~~g~~~Giit~~dl 122 (141)
T 2rih_A 103 HVVVVNKNGELVGVLSIRDL 122 (141)
T ss_dssp EEEEECTTSCEEEEEEHHHH
T ss_pred EEEEEcCCCcEEEEEEHHHH
Confidence 58999999999999988764
Done!