Query 022054
Match_columns 303
No_of_seqs 128 out of 862
Neff 7.6
Searched_HMMs 46136
Date Fri Mar 29 07:41:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022054.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022054hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1387 Glycosyltransferase [C 100.0 3.7E-55 7.9E-60 397.4 24.8 276 8-295 12-296 (465)
2 PLN02949 transferase, transfer 100.0 6.7E-53 1.5E-57 411.7 28.3 272 25-296 24-295 (463)
3 cd03806 GT1_ALG11_like This fa 100.0 2.5E-44 5.5E-49 347.9 25.6 262 36-297 2-265 (419)
4 cd03805 GT1_ALG2_like This fam 99.8 3.4E-19 7.3E-24 169.1 20.8 227 35-297 1-239 (392)
5 cd03804 GT1_wbaZ_like This fam 99.8 1.6E-18 3.6E-23 162.5 18.8 220 36-295 1-221 (351)
6 PRK15179 Vi polysaccharide bio 99.6 2.1E-13 4.4E-18 139.2 22.7 227 36-297 283-545 (694)
7 PF13439 Glyco_transf_4: Glyco 99.6 1.7E-14 3.7E-19 120.5 10.4 175 37-258 1-176 (177)
8 cd03818 GT1_ExpC_like This fam 99.5 6E-13 1.3E-17 127.4 19.4 224 36-297 1-240 (396)
9 cd03809 GT1_mtfB_like This fam 99.5 6.7E-13 1.4E-17 122.9 17.0 215 36-298 1-224 (365)
10 TIGR03088 stp2 sugar transfera 99.5 7.2E-13 1.6E-17 125.3 16.9 211 34-297 1-222 (374)
11 cd03796 GT1_PIG-A_like This fa 99.5 1E-12 2.2E-17 126.0 17.1 215 36-297 1-221 (398)
12 cd04955 GT1_like_6 This family 99.5 2.1E-12 4.5E-17 120.4 18.0 210 36-296 1-220 (363)
13 PRK10307 putative glycosyl tra 99.5 3.1E-12 6.7E-17 123.1 18.3 241 35-301 1-261 (412)
14 cd03819 GT1_WavL_like This fam 99.5 1.7E-12 3.7E-17 120.7 15.5 196 40-297 3-213 (355)
15 cd04962 GT1_like_5 This family 99.5 1.8E-12 4E-17 121.6 15.4 216 35-301 1-229 (371)
16 PRK09922 UDP-D-galactose:(gluc 99.4 2.9E-12 6.2E-17 121.3 15.5 202 35-296 1-209 (359)
17 cd03811 GT1_WabH_like This fam 99.4 4.4E-12 9.6E-17 115.4 15.6 209 36-297 1-217 (353)
18 TIGR03449 mycothiol_MshA UDP-N 99.4 4.8E-12 1E-16 121.1 16.1 83 215-297 157-247 (405)
19 PLN02871 UDP-sulfoquinovose:DA 99.4 1.5E-11 3.3E-16 120.6 18.6 220 32-296 56-290 (465)
20 cd03820 GT1_amsD_like This fam 99.4 1.9E-11 4.1E-16 111.2 17.9 203 36-297 1-206 (348)
21 PRK10125 putative glycosyl tra 99.4 2.4E-11 5.2E-16 117.5 19.1 81 215-296 184-270 (405)
22 TIGR02149 glgA_Coryne glycogen 99.4 1.1E-11 2.5E-16 117.3 16.6 214 35-296 1-228 (388)
23 cd03812 GT1_CapH_like This fam 99.4 9.7E-12 2.1E-16 115.8 14.9 209 36-297 1-220 (358)
24 cd03807 GT1_WbnK_like This fam 99.3 3.9E-11 8.5E-16 110.1 16.1 208 36-297 1-221 (365)
25 cd03802 GT1_AviGT4_like This f 99.3 6.8E-11 1.5E-15 109.1 17.4 191 35-294 1-196 (335)
26 TIGR02472 sucr_P_syn_N sucrose 99.3 7.8E-11 1.7E-15 114.8 17.5 227 47-294 25-273 (439)
27 cd03801 GT1_YqgM_like This fam 99.3 2E-10 4.3E-15 104.7 18.9 217 36-297 1-227 (374)
28 cd03795 GT1_like_4 This family 99.3 2.2E-10 4.8E-15 106.3 19.3 208 36-295 1-217 (357)
29 cd04951 GT1_WbdM_like This fam 99.3 1E-10 2.2E-15 108.7 16.7 203 36-297 1-216 (360)
30 KOG0853 Glycosyltransferase [C 99.3 2.7E-12 5.8E-17 124.6 6.2 232 32-297 32-301 (495)
31 cd03799 GT1_amsK_like This is 99.3 2E-10 4.3E-15 106.5 17.2 203 36-297 1-207 (355)
32 cd03822 GT1_ecORF704_like This 99.3 1.9E-10 4E-15 106.5 16.9 199 36-297 1-213 (366)
33 cd05844 GT1_like_7 Glycosyltra 99.3 9E-11 1.9E-15 110.0 14.2 136 135-297 77-216 (367)
34 cd03800 GT1_Sucrose_synthase T 99.3 2.3E-10 4.9E-15 108.1 17.0 83 215-297 157-248 (398)
35 cd03823 GT1_ExpE7_like This fa 99.2 5.1E-10 1.1E-14 103.0 16.7 74 223-296 145-218 (359)
36 cd03794 GT1_wbuB_like This fam 99.2 5.6E-10 1.2E-14 103.1 16.9 233 36-297 1-248 (394)
37 cd03816 GT1_ALG1_like This fam 99.2 3.9E-10 8.5E-15 109.2 16.5 223 33-296 2-259 (415)
38 PRK00654 glgA glycogen synthas 99.2 3.5E-10 7.7E-15 111.1 16.4 82 216-297 192-310 (466)
39 cd03808 GT1_cap1E_like This fa 99.2 2.7E-09 5.8E-14 97.4 20.0 211 36-297 1-216 (359)
40 cd03821 GT1_Bme6_like This fam 99.2 1.1E-09 2.4E-14 100.8 17.3 218 36-297 1-231 (375)
41 cd03798 GT1_wlbH_like This fam 99.1 2.4E-09 5.2E-14 98.1 17.5 83 215-297 142-230 (377)
42 cd03791 GT1_Glycogen_synthase_ 99.1 1.2E-09 2.6E-14 107.0 15.7 84 215-298 204-325 (476)
43 cd03792 GT1_Trehalose_phosphor 99.1 9.9E-10 2.1E-14 104.2 14.6 203 36-297 1-218 (372)
44 cd03814 GT1_like_2 This family 99.1 1.3E-09 2.8E-14 100.7 14.2 214 36-297 1-225 (364)
45 TIGR02468 sucrsPsyn_pln sucros 99.1 4.8E-09 1E-13 110.3 19.4 251 31-296 166-506 (1050)
46 cd03817 GT1_UGDG_like This fam 99.1 3.7E-09 8.1E-14 97.4 16.8 219 36-297 1-230 (374)
47 PLN02275 transferase, transfer 99.1 5.8E-09 1.2E-13 99.5 18.5 84 209-295 153-239 (371)
48 TIGR02095 glgA glycogen/starch 99.1 2.1E-09 4.6E-14 105.6 15.9 83 215-297 199-319 (473)
49 PRK15427 colanic acid biosynth 99.1 2.2E-09 4.7E-14 103.8 15.7 81 216-297 169-250 (406)
50 PRK15490 Vi polysaccharide bio 99.1 3.7E-09 7.9E-14 104.8 16.7 135 134-297 274-426 (578)
51 cd03825 GT1_wcfI_like This fam 99.1 7.6E-09 1.7E-13 96.2 16.7 78 220-297 134-221 (365)
52 PLN02316 synthase/transferase 99.1 1.3E-08 2.9E-13 107.2 19.9 220 32-296 585-867 (1036)
53 PF13579 Glyco_trans_4_4: Glyc 99.0 1E-09 2.2E-14 89.8 8.1 155 48-252 1-160 (160)
54 PRK15484 lipopolysaccharide 1, 99.0 6.5E-09 1.4E-13 99.5 14.6 76 221-297 139-221 (380)
55 PRK14099 glycogen synthase; Pr 99.0 1.8E-08 3.8E-13 99.7 16.3 83 215-297 203-323 (485)
56 PRK00726 murG undecaprenyldiph 98.9 1.8E-08 3.9E-13 95.0 14.4 203 35-296 2-211 (357)
57 TIGR02470 sucr_synth sucrose s 98.9 1.7E-07 3.7E-12 96.7 20.5 244 32-296 253-577 (784)
58 TIGR03087 stp1 sugar transfera 98.9 1.9E-07 4E-12 89.6 19.8 87 210-296 161-255 (397)
59 cd03785 GT1_MurG MurG is an N- 98.9 5E-08 1.1E-12 91.3 15.0 196 45-296 7-209 (350)
60 cd03813 GT1_like_3 This family 98.8 3.2E-08 7E-13 97.5 12.9 145 139-297 172-321 (475)
61 TIGR01133 murG undecaprenyldip 98.6 6.1E-07 1.3E-11 83.9 13.6 193 45-296 8-207 (348)
62 PLN02939 transferase, transfer 98.6 9.4E-06 2E-10 85.0 21.6 78 219-296 691-806 (977)
63 cd04949 GT1_gtfA_like This fam 98.6 8.8E-07 1.9E-11 83.5 12.6 134 139-297 98-232 (372)
64 cd04946 GT1_AmsK_like This fam 98.6 4.2E-07 9.2E-12 87.8 10.6 79 218-298 180-259 (407)
65 PLN00142 sucrose synthase 98.5 5.6E-07 1.2E-11 93.0 11.6 142 139-297 407-601 (815)
66 TIGR02918 accessory Sec system 98.4 3.4E-06 7.3E-11 83.9 13.9 138 134-297 205-347 (500)
67 PRK14098 glycogen synthase; Pr 98.4 1.1E-06 2.5E-11 87.0 10.3 83 215-297 214-335 (489)
68 cd03793 GT1_Glycogen_synthase_ 98.4 3.6E-06 7.8E-11 83.9 13.3 82 214-296 219-326 (590)
69 PHA01630 putative group 1 glyc 98.4 1.5E-06 3.3E-11 81.9 9.3 77 219-297 92-170 (331)
70 PLN02846 digalactosyldiacylgly 98.4 1.4E-05 3E-10 78.5 16.1 69 222-297 181-256 (462)
71 PHA01633 putative glycosyl tra 98.3 2.9E-06 6.2E-11 80.1 8.5 78 218-297 89-176 (335)
72 PRK13609 diacylglycerol glucos 98.2 1.7E-05 3.8E-10 75.5 11.9 75 219-294 145-228 (380)
73 PLN02501 digalactosyldiacylgly 98.2 2.7E-05 5.9E-10 79.1 13.3 136 133-297 427-574 (794)
74 PRK05749 3-deoxy-D-manno-octul 98.1 0.00032 7E-09 67.9 18.1 79 214-297 171-259 (425)
75 KOG1111 N-acetylglucosaminyltr 98.0 8.6E-06 1.9E-10 76.1 4.9 205 46-298 13-224 (426)
76 PF09314 DUF1972: Domain of un 98.0 0.00089 1.9E-08 57.9 17.0 174 35-253 2-184 (185)
77 PLN02605 monogalactosyldiacylg 97.9 9.6E-05 2.1E-09 70.7 11.4 76 218-294 147-231 (382)
78 PRK13608 diacylglycerol glucos 97.7 0.00024 5.3E-09 68.3 10.1 73 219-292 145-226 (391)
79 TIGR00215 lpxB lipid-A-disacch 97.7 0.00034 7.3E-09 67.3 10.7 195 46-297 13-222 (385)
80 cd01635 Glycosyltransferase_GT 97.3 0.0018 3.9E-08 55.3 9.3 24 274-297 109-132 (229)
81 cd03788 GT1_TPS Trehalose-6-Ph 97.2 0.001 2.2E-08 65.6 8.2 55 244-298 227-293 (460)
82 cd04950 GT1_like_1 Glycosyltra 97.2 0.0042 9.1E-08 59.2 11.5 78 214-294 146-230 (373)
83 PRK00025 lpxB lipid-A-disaccha 97.1 0.0044 9.6E-08 58.7 10.4 75 220-297 133-217 (380)
84 PF12038 DUF3524: Domain of un 96.9 0.011 2.4E-07 50.0 10.1 33 221-253 119-168 (168)
85 TIGR02400 trehalose_OtsA alpha 96.9 0.0085 1.8E-07 59.1 10.9 54 244-297 222-287 (456)
86 PLN03063 alpha,alpha-trehalose 96.7 0.0017 3.6E-08 68.3 4.6 55 244-298 242-308 (797)
87 cd03786 GT1_UDP-GlcNAc_2-Epime 96.7 0.0077 1.7E-07 56.5 8.7 77 220-297 140-230 (363)
88 TIGR03492 conserved hypothetic 96.6 0.018 3.9E-07 55.7 10.3 215 45-296 4-235 (396)
89 PF12000 Glyco_trans_4_3: Gkyc 96.4 0.075 1.6E-06 45.4 11.8 109 132-258 56-170 (171)
90 KOG2941 Beta-1,4-mannosyltrans 96.2 0.14 3.1E-06 48.3 13.4 219 34-293 12-279 (444)
91 PF13477 Glyco_trans_4_2: Glyc 96.2 0.11 2.3E-06 41.7 11.4 126 51-229 10-139 (139)
92 TIGR00236 wecB UDP-N-acetylglu 95.9 0.11 2.5E-06 49.0 12.0 76 221-297 141-227 (365)
93 PRK14501 putative bifunctional 95.6 0.045 9.8E-07 57.1 8.3 54 245-298 229-294 (726)
94 PRK12446 undecaprenyldiphospho 95.1 0.84 1.8E-05 43.4 14.8 128 124-294 75-211 (352)
95 COG0438 RfaG Glycosyltransfera 94.5 0.16 3.4E-06 45.1 7.8 76 221-297 150-227 (381)
96 PF13528 Glyco_trans_1_3: Glyc 94.1 1.3 2.8E-05 40.7 13.2 213 35-296 1-216 (318)
97 COG0297 GlgA Glycogen synthase 93.7 2.9 6.4E-05 41.6 15.4 83 216-298 203-323 (487)
98 COG1519 KdtA 3-deoxy-D-manno-o 93.3 1.9 4.1E-05 41.8 12.9 196 37-298 51-258 (419)
99 PF05693 Glycogen_syn: Glycoge 93.2 1.3 2.9E-05 44.9 12.1 80 214-295 214-320 (633)
100 COG0707 MurG UDP-N-acetylgluco 92.0 1.4 3E-05 42.1 10.1 110 45-166 8-119 (357)
101 TIGR02398 gluc_glyc_Psyn gluco 90.1 1.6 3.5E-05 43.5 8.9 55 245-299 249-315 (487)
102 PF08323 Glyco_transf_5: Starc 90.0 1.6 3.4E-05 39.3 8.1 34 41-77 10-43 (245)
103 PF06925 MGDG_synth: Monogalac 88.7 1.3 2.7E-05 37.4 6.1 34 219-253 135-169 (169)
104 PF08660 Alg14: Oligosaccharid 88.7 6.3 0.00014 33.6 10.3 34 122-156 74-107 (170)
105 TIGR03713 acc_sec_asp1 accesso 88.4 0.87 1.9E-05 45.7 5.7 75 219-297 270-348 (519)
106 PRK09814 beta-1,6-galactofuran 87.4 1.8 3.8E-05 40.6 6.8 63 216-281 118-181 (333)
107 PF04007 DUF354: Protein of un 87.0 4.8 0.0001 38.1 9.5 141 52-254 14-156 (335)
108 PF04413 Glycos_transf_N: 3-De 85.6 7.3 0.00016 33.6 9.2 37 213-249 141-177 (186)
109 COG4671 Predicted glycosyl tra 84.6 10 0.00022 36.3 10.0 46 30-76 5-50 (400)
110 PLN03064 alpha,alpha-trehalose 78.6 8 0.00017 41.6 8.0 29 269-297 363-391 (934)
111 PF11997 DUF3492: Domain of un 68.3 21 0.00045 32.7 7.2 87 140-241 172-264 (268)
112 KOG3339 Predicted glycosyltran 57.5 1.3E+02 0.0028 26.2 10.6 33 36-72 40-72 (211)
113 TIGR03472 HpnI hopanoid biosyn 50.7 1.1E+02 0.0024 29.0 9.2 34 35-72 41-75 (373)
114 TIGR02201 heptsyl_trn_III lipo 50.7 92 0.002 29.0 8.5 24 53-76 15-38 (344)
115 PF12273 RCR: Chitin synthesis 50.6 13 0.00028 30.0 2.4 8 27-34 22-29 (130)
116 PF13844 Glyco_transf_41: Glyc 48.5 1.4E+02 0.003 29.8 9.5 109 35-172 1-112 (468)
117 PF00982 Glyco_transf_20: Glyc 48.3 44 0.00095 33.3 6.1 29 270-298 277-305 (474)
118 PRK10017 colanic acid biosynth 45.4 3E+02 0.0066 26.9 14.8 43 35-77 1-43 (426)
119 PRK10916 ADP-heptose:LPS hepto 44.2 1.7E+02 0.0038 27.2 9.3 39 35-76 1-39 (348)
120 PF06024 DUF912: Nucleopolyhed 43.3 22 0.00048 27.5 2.5 30 4-33 61-93 (101)
121 KOG3742 Glycogen synthase [Car 42.6 54 0.0012 32.5 5.5 87 205-295 238-351 (692)
122 PRK10422 lipopolysaccharide co 40.3 2.2E+02 0.0048 26.6 9.4 42 32-76 3-44 (352)
123 PF15102 TMEM154: TMEM154 prot 38.8 16 0.00035 30.3 1.2 24 11-34 67-90 (146)
124 PF11346 DUF3149: Protein of u 38.0 60 0.0013 21.1 3.5 31 2-32 9-39 (42)
125 PF08113 CoxIIa: Cytochrome c 38.0 72 0.0016 19.6 3.5 18 2-19 4-21 (34)
126 PF03808 Glyco_tran_WecB: Glyc 37.8 1.2E+02 0.0026 25.5 6.5 25 47-71 54-78 (172)
127 PF05762 VWA_CoxE: VWA domain 36.1 68 0.0015 28.2 4.8 50 27-76 49-99 (222)
128 TIGR02195 heptsyl_trn_II lipop 35.9 2.2E+02 0.0048 26.2 8.6 38 36-76 1-38 (334)
129 TIGR00696 wecB_tagA_cpsF bacte 33.1 1.8E+02 0.0039 24.8 6.8 25 47-71 54-78 (177)
130 PF12273 RCR: Chitin synthesis 32.4 18 0.0004 29.1 0.6 26 9-34 7-32 (130)
131 cd06533 Glyco_transf_WecG_TagA 30.4 2E+02 0.0044 24.1 6.7 32 33-71 45-76 (171)
132 PF11857 DUF3377: Domain of un 29.9 54 0.0012 24.0 2.5 17 10-26 37-53 (74)
133 COG0859 RfaF ADP-heptose:LPS h 28.6 2.3E+02 0.0051 26.4 7.4 40 34-76 1-40 (334)
134 PF09861 DUF2088: Domain of un 28.5 87 0.0019 27.4 4.2 47 31-77 51-100 (204)
135 TIGR02094 more_P_ylases alpha- 28.2 46 0.001 34.2 2.7 26 270-295 390-415 (601)
136 COG3914 Spy Predicted O-linked 28.1 2.2E+02 0.0048 29.1 7.3 45 28-75 253-297 (620)
137 TIGR03141 cytochro_ccmD heme e 26.8 1.2E+02 0.0025 19.7 3.6 14 1-14 1-14 (45)
138 PF12606 RELT: Tumour necrosis 25.8 1E+02 0.0022 20.8 3.1 19 15-33 12-30 (50)
139 PF02504 FA_synthesis: Fatty a 24.9 5.2E+02 0.011 24.4 8.9 24 127-150 81-104 (323)
140 PRK10355 xylF D-xylose transpo 24.3 3.7E+02 0.0081 24.8 7.9 59 11-76 6-64 (330)
141 PF15183 MRAP: Melanocortin-2 24.2 1.2E+02 0.0027 22.7 3.6 22 5-26 39-60 (90)
142 PRK01021 lpxB lipid-A-disaccha 24.0 2.2E+02 0.0048 29.3 6.6 32 35-70 227-258 (608)
143 PRK14716 bacteriophage N4 adso 23.9 4.6E+02 0.01 26.3 8.9 38 33-74 64-103 (504)
144 PRK10964 ADP-heptose:LPS hepto 23.6 4.8E+02 0.01 23.8 8.5 39 35-76 1-39 (322)
145 cd03789 GT1_LPS_heptosyltransf 23.5 5.3E+02 0.011 22.9 10.2 38 219-259 196-233 (279)
146 PRK15395 methyl-galactoside AB 23.0 3.3E+02 0.0071 25.1 7.3 43 31-75 21-63 (330)
147 cd03784 GT1_Gtf_like This fami 21.7 4.3E+02 0.0094 24.7 8.0 37 35-76 1-37 (401)
148 PF05454 DAG1: Dystroglycan (D 20.6 33 0.00072 31.9 0.0 28 10-37 152-180 (290)
No 1
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=3.7e-55 Score=397.44 Aligned_cols=276 Identities=36% Similarity=0.642 Sum_probs=241.1
Q ss_pred HHHHHHHHHHHHHHHHHhh------hhccCCCCcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCCh
Q 022054 8 IWAVITAVLASILILASHV------HNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFP 81 (303)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~ 81 (303)
+--.|.++.-+++++++.+ ++. +++-..||||||+|++|||||||+|.+++.+|+.+|++..++||++.|+++
T Consensus 12 i~~~l~~v~~l~~l~~~l~~k~sl~~~~-~k~~ktvgfFHPYCNAGGGGErVLW~Avr~~q~k~~n~~~viYsGD~n~t~ 90 (465)
T KOG1387|consen 12 ISSSLVLVYGLIKLLTWLFKKSSLLNRA-EKNVKTVGFFHPYCNAGGGGERVLWKAVRITQRKFPNNVIVIYSGDFNVTP 90 (465)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHhhhhh-hhhceEEEEecccccCCCCcceehhHHHHHHHHhCCCceEEEEeCCCCCCH
Confidence 3345666666777666665 222 455678999999999999999999999999999999999999999988999
Q ss_pred hHHHHhhhhccCcccc-CCCeEEEccccceeecccCCchhhhhHHHHHHHHHHHHHhccCCcEEEeCCCcccccce-eec
Q 022054 82 DSLLARAVDRFGVELL-HPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPL-ARI 159 (303)
Q Consensus 82 ~~~~~~~~~~~~~~l~-~~~~~i~L~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~pDv~i~t~~~~~~~pl-a~~ 159 (303)
++++++++..|+++++ ..+.|+.|+.+.+++.+.|++||+++|++|+|+++++++.++.||++|||||+++.+|+ +++
T Consensus 91 ~~IL~k~k~~F~idlDs~nI~Fi~Lk~R~lVea~~~~hfTllgQaigsmIl~~Eai~r~~Pdi~IDtMGY~fs~p~~r~l 170 (465)
T KOG1387|consen 91 ENILNKVKNKFDIDLDSDNIFFIYLKLRYLVEASTWKHFTLLGQAIGSMILAFEAIIRFPPDIFIDTMGYPFSYPIFRRL 170 (465)
T ss_pred HHHHHHHHHhcCceecccceEEEEEEeeeeeecccccceehHHHHHHHHHHHHHHHHhCCchheEecCCCcchhHHHHHH
Confidence 9999999999999985 55599999999999999999999999999999999999999999999999999999997 448
Q ss_pred cCCeEEEEeecCCcchHHHhhhhccccccCchhhhhhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHH
Q 022054 160 FGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKL 239 (303)
Q Consensus 160 ~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~ 239 (303)
.+.|+++|+|||.||+||+..+..|.. +..+...|..|||+|..+|..++..||.+++||+||.++|.+.
T Consensus 171 ~~~~V~aYvHYP~iS~DML~~l~qrq~----------s~~l~~~KlaY~rlFa~lY~~~G~~ad~vm~NssWT~nHI~qi 240 (465)
T KOG1387|consen 171 RRIPVVAYVHYPTISTDMLKKLFQRQK----------SGILVWGKLAYWRLFALLYQSAGSKADIVMTNSSWTNNHIKQI 240 (465)
T ss_pred ccCceEEEEecccccHHHHHHHHhhhh----------cchhhhHHHHHHHHHHHHHHhccccceEEEecchhhHHHHHHH
Confidence 899999999999999999999876532 2346667889999999999999999999999999999999999
Q ss_pred hCCCCCceEEcCCCCCCcccccCCCCCCCCCEEEEEcCcccccChH-HHHHHHHHcc
Q 022054 240 WGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKVRY-KLISTRHILF 295 (303)
Q Consensus 240 ~~~~~~~~VIYPPvd~~~~~~~~~~~~~~~~~iLsvgRl~p~Kn~~-llI~Afa~L~ 295 (303)
|+. .+..+|||||++++..+....++++++.+|++|+|+|||||. ++++|+...+
T Consensus 241 W~~-~~~~iVyPPC~~e~lks~~~te~~r~~~ll~l~Q~RPEKnH~~Lql~Al~~~~ 296 (465)
T KOG1387|consen 241 WQS-NTCSIVYPPCSTEDLKSKFGTEGERENQLLSLAQFRPEKNHKILQLFALYLKN 296 (465)
T ss_pred hhc-cceeEEcCCCCHHHHHHHhcccCCcceEEEEEeecCcccccHHHHHHHHHHhc
Confidence 994 789999999999988754333444579999999999999999 7777766543
No 2
>PLN02949 transferase, transferring glycosyl groups
Probab=100.00 E-value=6.7e-53 Score=411.69 Aligned_cols=272 Identities=77% Similarity=1.340 Sum_probs=246.7
Q ss_pred hhhhccCCCCcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEE
Q 022054 25 HVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVH 104 (303)
Q Consensus 25 ~~~~~~~~~~~rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~ 104 (303)
..++.|..++++|+||||+||.|||||||+|+++.+|++.++++++++||+++|.++++++.++.++|+++++..+.|+.
T Consensus 24 ~~~~~~~~~~~~v~f~HP~~~~ggG~ERvl~~a~~~l~~~~~~~~v~iyt~~~d~~~~~~l~~~~~~~~i~~~~~~~~v~ 103 (463)
T PLN02949 24 SVLRARRSRKRAVGFFHPYTNDGGGGERVLWCAVRAIQEENPDLDCVIYTGDHDASPDSLAARARDRFGVELLSPPKVVH 103 (463)
T ss_pred HHHhcccCCCcEEEEECCCCCCCCChhhHHHHHHHHHHhhCCCCeEEEEcCCCCCCHHHHHHHHHhhcceecCCCceEEE
Confidence 34899999999999999999999999999999999999999999999999999888888888888899999888889999
Q ss_pred ccccceeecccCCchhhhhHHHHHHHHHHHHHhccCCcEEEeCCCcccccceeeccCCeEEEEeecCCcchHHHhhhhcc
Q 022054 105 LYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREG 184 (303)
Q Consensus 105 L~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~pDv~i~t~~~~~~~pla~~~~~~~i~Y~H~P~~s~~~~~~~~~~ 184 (303)
++.+.|++++.|++||+++|++++++.+++++.+..||+++||+|+++++|++++.++|+++|||||++|.||+..++++
T Consensus 104 l~~~~~~~~~~~~~~t~~~~~~~~~~l~~~~~~~~~p~v~vDt~~~~~~~pl~~~~~~~v~~yvH~p~~~~dm~~~v~~~ 183 (463)
T PLN02949 104 LRKRKWIEEETYPRFTMIGQSLGSVYLAWEALCKFTPLYFFDTSGYAFTYPLARLFGCKVVCYTHYPTISSDMISRVRDR 183 (463)
T ss_pred eccccccccccCCceehHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccHHHHHHhcCCcEEEEEeCCcchHHHHHHHhhc
Confidence 98899999999999999999999999999998778899999999999999987667899999999999999999999999
Q ss_pred ccccCchhhhhhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCCC
Q 022054 185 SSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE 264 (303)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~~~~~~ 264 (303)
+..|+|+++++++.+.+.+|.+|++.++++|+++.+.+|.|++||+||++++++.|+.+.++.|+|||||++.+...+.+
T Consensus 184 ~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad~ii~nS~~t~~~l~~~~~~~~~i~vvyp~vd~~~~~~~~~~ 263 (463)
T PLN02949 184 SSMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIEALWRIPERIKRVYPPCDTSGLQALPLE 263 (463)
T ss_pred ccccCccchhhccchhHHHHHHHHHHHHHHHHHHcCCCCEEEECCHHHHHHHHHHcCCCCCeEEEcCCCCHHHcccCCcc
Confidence 99999999999988888999999999999999999999999999999999999999754578999999998766432222
Q ss_pred CCCCCCEEEEEcCcccccChHHHHHHHHHccc
Q 022054 265 RSTEYPAIISVAQFRPEKVRYKLISTRHILFN 296 (303)
Q Consensus 265 ~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~ 296 (303)
...++++++++|||+|+||++++|+||+.+.+
T Consensus 264 ~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~ 295 (463)
T PLN02949 264 RSEDPPYIISVAQFRPEKAHALQLEAFALALE 295 (463)
T ss_pred ccCCCCEEEEEEeeeccCCHHHHHHHHHHHHH
Confidence 22235799999999999999999999998754
No 3
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=100.00 E-value=2.5e-44 Score=347.92 Aligned_cols=262 Identities=50% Similarity=0.882 Sum_probs=230.7
Q ss_pred EEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEcc-ccceeecc
Q 022054 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLY-RRKWIEES 114 (303)
Q Consensus 36 rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~-~~~~~~~~ 114 (303)
.||||||+||+|||||||+|+++.+|++.+++++|+|||++++.+.++++++..+.|++++.++++++.+. .+.+.+++
T Consensus 2 ~~~f~hp~~~~ggg~ervl~~a~~~l~~~~~~~~v~i~t~~~~~~~~~~l~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 81 (419)
T cd03806 2 TVGFFHPYCNAGGGGERVLWCAVRALQKRYPNNIVVIYTGDLDATPEEILEKVESRFNIELDRPRIVFFLLKYRKLVEAS 81 (419)
T ss_pred eEEEECCCCCCCCCchHHHHHHHHHHHHhCCCcEEEEECCCCCCCHHHHHHHHHHhcCeecCCCceEEEEecceeeeccc
Confidence 68999999999999999999999999999999999999999877766788888889999888888877653 66899999
Q ss_pred cCCchhhhhHHHHHHHHHHHHHhccCCcEEEeCCCcccccceee-ccCCeEEEEeecCCcchHHHhhhhccccccCchhh
Q 022054 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTISLDMISRVREGSSMYNNNAS 193 (303)
Q Consensus 115 ~~~~~~l~~~~l~~~~~~~~~l~~~~pDv~i~t~~~~~~~pla~-~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~~ 193 (303)
.++++++.+|+++++...++.+.+.+|||+++++++++++|+++ ++++|+++|||+|.+|.||+..++.+...|+|+.+
T Consensus 82 ~~~r~~~~~~~~~~~~~~~~~~~~~~pDv~i~~~g~~~~~~~~~~~~~~~~i~y~h~P~~~~d~l~~~~~~~~~~~~~~~ 161 (419)
T cd03806 82 TYPRFTLLGQALGSMILGLEALLKLVPDIFIDTMGYPFTYPLVRLLGGCPVGAYVHYPTISTDMLQKVRSREASYNNSAT 161 (419)
T ss_pred cCCceeeHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccHHHHHHHhcCCeEEEEecCCcchHHHHHHHhhccccccCccc
Confidence 99999999999998888888886778999999999999889765 57899999999999999999888888888999999
Q ss_pred hhhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCCCCCCCCCEEE
Q 022054 194 IAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAII 273 (303)
Q Consensus 194 ~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~~~~~~~~~~~~~iL 273 (303)
++++...+.+|.+||+++++++++..+.+|.+++||+||++++.+.|+...++.|||||||++.+...+......+..++
T Consensus 162 ~~~~~~~~~~k~~y~~~~~~~~~~~~~~aD~ii~~S~~~~~~~~~~~~~~~~~~vi~~gvd~~~~~~~~~~~~~~~~~il 241 (419)
T cd03806 162 IARSPVLSKAKLLYYRLFAFLYGLAGSFADVVMVNSTWTRNHIRSLWKRNTKPSIVYPPCDVEELLKLPLDEKTRENQIL 241 (419)
T ss_pred hhccchHHHHHHHHHHHHHHHHHHHhhcCCEEEECCHHHHHHHHHHhCcCCCcEEEcCCCCHHHhcccccccccCCcEEE
Confidence 99988788899999999999999999999999999999999999998743389999999998877532211122257999
Q ss_pred EEcCcccccChHHHHHHHHHcccC
Q 022054 274 SVAQFRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 274 svgRl~p~Kn~~llI~Afa~L~~~ 297 (303)
++||++|+||++++|+||+.+.++
T Consensus 242 ~vgr~~~~K~~~~li~A~~~l~~~ 265 (419)
T cd03806 242 SIAQFRPEKNHPLQLRAFAKLLKR 265 (419)
T ss_pred EEEeecCCCCHHHHHHHHHHHHHh
Confidence 999999999999999999998754
No 4
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=99.83 E-value=3.4e-19 Score=169.12 Aligned_cols=227 Identities=24% Similarity=0.331 Sum_probs=141.0
Q ss_pred cEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccceeecc
Q 022054 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (303)
Q Consensus 35 ~rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~~~~~ 114 (303)
|+|+|+||++ ..||+||++.+++++|.+.+ +++.++|...+ ......+.. .+.+.+... +.+.+..
T Consensus 1 mkIl~~~~~~-~~gG~e~~~~~la~~L~~~G--~~V~v~~~~~~--~~~~~~~~~-------~~~~~i~~~--~~~~~~~ 66 (392)
T cd03805 1 LRVAFIHPDL-GIGGAERLVVDAALALQSRG--HEVTIYTSHHD--PSHCFEETK-------DGTLPVRVR--GDWLPRS 66 (392)
T ss_pred CeEEEECCCC-CCchHHHHHHHHHHHHHhCC--CeEEEEcCCCC--chhcchhcc-------CCeeEEEEE--eEEEcch
Confidence 6899999999 47999999999999999886 55677775431 111111111 110111111 1122222
Q ss_pred cCCchhhhhHHHHHHHHHHH--HHhccCCcEEEeCCCccccccee-eccCCeEEEEeecCCcchHHHhhhhccccccCch
Q 022054 115 TYPRFTMIGQSFGSVYLSWE--ALCKFTPLYYFDTSGYAFTYPLA-RIFGCRVICYTHYPTISLDMISRVREGSSMYNNN 191 (303)
Q Consensus 115 ~~~~~~l~~~~l~~~~~~~~--~l~~~~pDv~i~t~~~~~~~pla-~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~ 191 (303)
...++..++..+........ ..+..++|+++..... ...++. ...+.|++.++|+|. .....+
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~-~~~~~~~~~~~~~~i~~~h~~~------~~~~~~------- 132 (392)
T cd03805 67 IFGRFHILCAYLRMLYLALYLLLLPDEKYDVFIVDQVS-ACVPLLKLFSPSKILFYCHFPD------QLLAQR------- 132 (392)
T ss_pred hhHhHHHHHHHHHHHHHHHHHHhcccCCCCEEEEcCcc-hHHHHHHHhcCCcEEEEEecCh------HHhcCC-------
Confidence 22222233333322222221 2456789987744222 222322 223478999999987 111000
Q ss_pred hhhhhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCC-ceEEcCCCCCCcccccCCC-----
Q 022054 192 ASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDR-IKRVYPPCDTSGLQVLPLE----- 264 (303)
Q Consensus 192 ~~~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~-~~~-~~VIYPPvd~~~~~~~~~~----- 264 (303)
.+..+.++..++.++.++.++.+|.++++|+++++.+.+.++. ..+ +.||||++|.+.+...+..
T Consensus 133 --------~~~~~~~~~~~~~~~e~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~n~vd~~~~~~~~~~~~~~~ 204 (392)
T cd03805 133 --------GSLLKRLYRKPFDWLEEFTTGMADKIVVNSNFTASVFKKTFPSLAKNPREVVYPCVDTDSFESTSEDPDPGL 204 (392)
T ss_pred --------CcHHHHHHHHHHHHHHHHHhhCceEEEEcChhHHHHHHHHhcccccCCcceeCCCcCHHHcCcccccccccc
Confidence 1223455666677778888999999999999999999998874 333 4599999998877532111
Q ss_pred --CCCCCCEEEEEcCcccccChHHHHHHHHHcccC
Q 022054 265 --RSTEYPAIISVAQFRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 265 --~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~~ 297 (303)
......+++++||+.++||++.+|+|++++.++
T Consensus 205 ~~~~~~~~~i~~~grl~~~Kg~~~ll~a~~~l~~~ 239 (392)
T cd03805 205 LIPKSGKKTFLSINRFERKKNIALAIEAFAILKDK 239 (392)
T ss_pred cccCCCceEEEEEeeecccCChHHHHHHHHHHHhh
Confidence 112257899999999999999999999998765
No 5
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.81 E-value=1.6e-18 Score=162.50 Aligned_cols=220 Identities=17% Similarity=0.133 Sum_probs=131.7
Q ss_pred EEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccceeeccc
Q 022054 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (303)
Q Consensus 36 rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~~~~~~ 115 (303)
||||+|+++...|||||++.++++++.+ ++ ++|...+...... .. .. ..++...+......
T Consensus 1 ~i~~~~~~~~~~GG~E~~~~~l~~~l~~----~~--v~~~~~~~~~~~~--~~----~~---~~~~~~~~~~~~~~---- 61 (351)
T cd03804 1 KVAIVHDWLVNIGGGEKVVEALARLFPD----AD--IFTLVDDPDKLPR--LL----RL---KKIRTSFIQKLPFA---- 61 (351)
T ss_pred CEEEEEeccccCCCHHHHHHHHHHhCCC----CC--EEEEeecCCccch--hh----cC---Cceeechhhhchhh----
Confidence 6999999999899999999988887743 43 3333221111000 00 00 00001111100000
Q ss_pred CCchhhhhHHHHHHHHHHHHHhccCCcEEEeCCCcccccceeeccCCeEEEEeecCCcchHHHhhhhccccccCchhhhh
Q 022054 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIA 195 (303)
Q Consensus 116 ~~~~~l~~~~l~~~~~~~~~l~~~~pDv~i~t~~~~~~~pla~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~~~~ 195 (303)
.+.....+..+..+.+.+...++|+++++.... ...+....+.++++|||.|. ++.|+.... +..
T Consensus 62 ---~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~-~~~~~~~~~~~~~~~~h~~~------~~~~~~~~~-----~~~ 126 (351)
T cd03804 62 ---RRRYRKYLPLMPLAIEQFDLSGYDLVISSSHAV-AKGVITRPDQLHICYCHTPM------RYAWDLYHD-----YLK 126 (351)
T ss_pred ---HhhHhhhCchhhHHHHhccccCCCEEEEcCcHH-hccccCCCCCcEEEEeCCch------HHHhcCchH-----hhh
Confidence 001111111222334456667899888664322 11221235689999999987 555543111 111
Q ss_pred hch-hhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCCCCCCCCCEEEE
Q 022054 196 QSN-WLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIIS 274 (303)
Q Consensus 196 ~~~-~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~~~~~~~~~~~~~iLs 274 (303)
... ............+..+.....+++|.++++|+.+++.+.+.++ .+..|||||+|.+.+... . .+++++++
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~--~~~~vi~~~~d~~~~~~~--~--~~~~~il~ 200 (351)
T cd03804 127 ESGLGKRLALRLLLHYLRIWDRRSAARVDYFIANSRFVARRIKKYYG--RDATVIYPPVDTDRFTPA--E--EKEDYYLS 200 (351)
T ss_pred hcccchhhHHHHHHHHHHHHHHHHhcCCCEEEECCHHHHHHHHHHhC--CCcEEECCCCCHhhcCcC--C--CCCCEEEE
Confidence 110 0111112223344445667789999999999999999999997 678999999999887522 1 22578999
Q ss_pred EcCcccccChHHHHHHHHHcc
Q 022054 275 VAQFRPEKVRYKLISTRHILF 295 (303)
Q Consensus 275 vgRl~p~Kn~~llI~Afa~L~ 295 (303)
+||+.++||++.+|+||+.++
T Consensus 201 ~G~~~~~K~~~~li~a~~~~~ 221 (351)
T cd03804 201 VGRLVPYKRIDLAIEAFNKLG 221 (351)
T ss_pred EEcCccccChHHHHHHHHHCC
Confidence 999999999999999999875
No 6
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.59 E-value=2.1e-13 Score=139.17 Aligned_cols=227 Identities=14% Similarity=0.082 Sum_probs=126.7
Q ss_pred EEEEEcCCCCCCChHHHHHHHHHHHHHHhCC------------CCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEE
Q 022054 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESP------------DLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVV 103 (303)
Q Consensus 36 rVa~~hp~l~~~GGaErv~~~la~aL~~~~~------------~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i 103 (303)
||.++.+.+ ..|||||++.++++++.+.+. +..+++.+.......+.....+.+ -|+. +.
T Consensus 283 rIl~vi~sl-~~GGAEr~~~~La~~l~~~~~~~~~~~g~g~~~~~~V~~~~~~~~~g~~~~~~~L~~-~Gv~------v~ 354 (694)
T PRK15179 283 PVLMINGSL-GAGGAERQFVNTAVALQSAIQQGQSIAGYGVLGPVQVVCRSLRSREGADFFAATLAD-AGIP------VS 354 (694)
T ss_pred eEEEEeCCC-CCCcHHHHHHHHHHHHHhcccCcccccCccCCCCcEEEEEecccccCcchHHHHHHh-CCCe------EE
Confidence 999999999 589999999999999999743 234444432110001111112211 1222 33
Q ss_pred Ecccccee-ecc---cCCchh-----hhhHHHHHHHHHHHHHhccCCcEEEeCCCcccccc-ee-eccCCeEEEEe-ec-
Q 022054 104 HLYRRKWI-EES---TYPRFT-----MIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-LA-RIFGCRVICYT-HY- 170 (303)
Q Consensus 104 ~L~~~~~~-~~~---~~~~~~-----l~~~~l~~~~~~~~~l~~~~pDv~i~t~~~~~~~p-la-~~~~~~~i~Y~-H~- 170 (303)
.+...... .+. ....+. +.+.....+....+.+++.+|||++..+..++.+. ++ +..+.|++.+. |.
T Consensus 355 ~l~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~L~~~lk~~kpDIVH~h~~~a~~lg~lAa~~~gvPvIv~t~h~~ 434 (694)
T PRK15179 355 VYSDMQAWGGCEFSSLLAPYREYLRFLPKQIIEGTTKLTDVMRSSVPSVVHIWQDGSIFACALAALLAGVPRIVLSVRTM 434 (694)
T ss_pred EeccCCccCcccccccchhhHHHhhhcchhHHHHHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHHcCCCEEEEEeCCC
Confidence 33221100 000 000000 00011112233445578889999886544333332 22 24577876644 43
Q ss_pred CCcchHHHhhhhccccccCchhhhhhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEE
Q 022054 171 PTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRV 249 (303)
Q Consensus 171 P~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~-~~~~~VI 249 (303)
|.. .+ ....+..|..++..+ .....+.+++||.++++.+.+.++. ++++.||
T Consensus 435 ~~~-------------~~-----------~~~~~~~~~~l~~~l---~~~~~~i~Vs~S~~~~~~l~~~~g~~~~kI~VI 487 (694)
T PRK15179 435 PPV-------------DR-----------PDRYRVEYDIIYSEL---LKMRGVALSSNSQFAAHRYADWLGVDERRIPVV 487 (694)
T ss_pred ccc-------------cc-----------hhHHHHHHHHHHHHH---HhcCCeEEEeCcHHHHHHHHHHcCCChhHEEEE
Confidence 110 00 001112222222111 1234689999999999999988887 6789999
Q ss_pred cCCCCCCcccccCC--------CC--CCCCCEEEEEcCcccccChHHHHHHHHHcccC
Q 022054 250 YPPCDTSGLQVLPL--------ER--STEYPAIISVAQFRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 250 YPPvd~~~~~~~~~--------~~--~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~~ 297 (303)
||+||++.+...+. .. .....+++++||++|+||++.+|+||+.+.++
T Consensus 488 ~NGVd~~~f~~~~~~~~~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~ 545 (694)
T PRK15179 488 YNGLAPLKSVQDDACTAMMAQFDARTSDARFTVGTVMRVDDNKRPFLWVEAAQRFAAS 545 (694)
T ss_pred CCCcCHHhcCCCchhhHHHHhhccccCCCCeEEEEEEeCCccCCHHHHHHHHHHHHHH
Confidence 99999877642110 00 11135788999999999999999999987654
No 7
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=99.56 E-value=1.7e-14 Score=120.46 Aligned_cols=175 Identities=18% Similarity=0.121 Sum_probs=89.7
Q ss_pred EEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccceeecccC
Q 022054 37 VAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTY 116 (303)
Q Consensus 37 Va~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~~~~~~~ 116 (303)
|.+++.++...||+|+++.+++++|.+.| +++.+++...+... ... . ....... ..
T Consensus 1 ili~~~~~~~~GG~e~~~~~l~~~l~~~G--~~v~v~~~~~~~~~---~~~-----~--------~~~~~~~-~~----- 56 (177)
T PF13439_consen 1 ILITNIFLPNIGGAERVVLNLARALAKRG--HEVTVVSPGVKDPI---EEE-----L--------VKIFVKI-PY----- 56 (177)
T ss_dssp -EEECC-TTSSSHHHHHHHHHHHHHHHTT---EEEEEESS-TTS----SST-----E--------EEE---T-T------
T ss_pred CEEEEecCCCCChHHHHHHHHHHHHHHCC--CEEEEEEcCCCccc---hhh-----c--------cceeeee-ec-----
Confidence 56778888889999999999999999975 55677775431110 000 0 0000000 00
Q ss_pred CchhhhhHHHHHHHHHHHHHhccCCcEEEeCCCcccccceeeccCCeEEEEeecCCcchHHHhhhhccccccCchhhhhh
Q 022054 117 PRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQ 196 (303)
Q Consensus 117 ~~~~l~~~~l~~~~~~~~~l~~~~pDv~i~t~~~~~~~pla~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~~~~~ 196 (303)
.........+.......+.+++.+||+++...............+.|.++++|.+..... .+.. .
T Consensus 57 ~~~~~~~~~~~~~~~~~~~i~~~~~DiVh~~~~~~~~~~~~~~~~~~~v~~~H~~~~~~~----~~~~----~------- 121 (177)
T PF13439_consen 57 PIRKRFLRSFFFMRRLRRLIKKEKPDIVHIHGPPAFWIALLACRKVPIVYTIHGPYFERR----FLKS----K------- 121 (177)
T ss_dssp SSTSS--HHHHHHHHHHHHHHHHT-SEEECCTTHCCCHHHHHHHCSCEEEEE-HHH--HH----TTTT----S-------
T ss_pred ccccccchhHHHHHHHHHHHHHcCCCeEEecccchhHHHHHhccCCCEEEEeCCCccccc----cccc----c-------
Confidence 000011111222233455577889999854332222222111127899999998662100 0000 0
Q ss_pred chhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcc
Q 022054 197 SNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGL 258 (303)
Q Consensus 197 ~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~-~~~~~VIYPPvd~~~~ 258 (303)
.+....+.... .....+.+|.++|+|+++++++.+ +|+ +.++.|||||||++.|
T Consensus 122 ---~~~~~~~~~~~----~~~~~~~~~~ii~vS~~~~~~l~~-~~~~~~ki~vI~ngid~~~F 176 (177)
T PF13439_consen 122 ---LSPYSYLNFRI----ERKLYKKADRIIAVSESTKDELIK-FGIPPEKIHVIYNGIDTDRF 176 (177)
T ss_dssp ---CCCHHHHHHCT----THHHHCCSSEEEESSHHHHHHHHH-HT--SS-EEE----B-CCCH
T ss_pred ---cchhhhhhhhh----hhhHHhcCCEEEEECHHHHHHHHH-hCCcccCCEEEECCccHHHc
Confidence 01111222222 233358999999999999999999 998 7899999999999887
No 8
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=99.53 E-value=6e-13 Score=127.43 Aligned_cols=224 Identities=18% Similarity=0.146 Sum_probs=127.4
Q ss_pred EEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccceeeccc
Q 022054 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (303)
Q Consensus 36 rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~~~~~~ 115 (303)
||.|+|+++- |- ..+++++|.+. ++++.++|...+... . + .++++.+..........
T Consensus 1 ~il~~~~~~p--~~----~~~la~~L~~~--G~~v~~~~~~~~~~~-------~---~-----~v~~~~~~~~~~~~~~~ 57 (396)
T cd03818 1 RILFVHQNFP--GQ----FRHLAPALAAQ--GHEVVFLTEPNAAPP-------P---G-----GVRVVRYRPPRGPTSGT 57 (396)
T ss_pred CEEEECCCCc--hh----HHHHHHHHHHC--CCEEEEEecCCCCCC-------C---C-----CeeEEEecCCCCCCCCC
Confidence 5889999983 44 34688999888 456677776432111 0 0 12233222111101111
Q ss_pred CCchhhhhHHHH---HHHHHHHHH--hccCCcEEEeCCCcccccceee-ccCCeEEEEeecCCcchHHHhhhhccccccC
Q 022054 116 YPRFTMIGQSFG---SVYLSWEAL--CKFTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTISLDMISRVREGSSMYN 189 (303)
Q Consensus 116 ~~~~~l~~~~l~---~~~~~~~~l--~~~~pDv~i~t~~~~~~~pla~-~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~ 189 (303)
++....+...+. .+......+ +..+||+++...++..+..+.. ..++|++.|+|+.... +.....++
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdvi~~h~~~~~~~~l~~~~~~~~~v~~~~~~~~~-------~~~~~~~~ 130 (396)
T cd03818 58 HPYLREFEEAVLRGQAVARALLALRAKGFRPDVIVAHPGWGETLFLKDVWPDAPLIGYFEFYYRA-------EGADVGFD 130 (396)
T ss_pred CccchhHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccchhhhHHHhCCCCCEEEEEeeeecC-------CCCCCCCC
Confidence 222222222111 111122222 3457999998777665555543 4678999999865410 00000111
Q ss_pred chhhhhhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCCC-----
Q 022054 190 NNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE----- 264 (303)
Q Consensus 190 ~~~~~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~~~~~~----- 264 (303)
.. ... ........+...++....++.+|.+|++|+++++.+.+.++ .++.||||++|++.+...+..
T Consensus 131 ~~-~~~-----~~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~~--~ki~vI~ngvd~~~f~~~~~~~~~~~ 202 (396)
T cd03818 131 PE-FPP-----SLDDALRLRNRNALILLALAQADAGVSPTRWQRSTFPAELR--SRISVIHDGIDTDRLRPDPQARLRLP 202 (396)
T ss_pred CC-CCC-----chhHHHHHHHhhhHhHHHHHhCCEEECCCHHHHhhCcHhhc--cceEEeCCCccccccCCCchhhhccc
Confidence 10 000 00000001111112445668899999999999999999886 899999999999887632110
Q ss_pred C----CCCCCEEEEEcC-cccccChHHHHHHHHHcccC
Q 022054 265 R----STEYPAIISVAQ-FRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 265 ~----~~~~~~iLsvgR-l~p~Kn~~llI~Afa~L~~~ 297 (303)
. ...++.++++|| ++++||++.+|+|++.+.++
T Consensus 203 ~~~~~~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~ 240 (396)
T cd03818 203 NGRVLTPGDEVITFVARNLEPYRGFHVFMRALPRLLRA 240 (396)
T ss_pred ccccCCCCCeEEEEECCCcccccCHHHHHHHHHHHHHH
Confidence 0 012467899998 99999999999999988654
No 9
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=99.51 E-value=6.7e-13 Score=122.88 Aligned_cols=215 Identities=16% Similarity=0.037 Sum_probs=128.5
Q ss_pred EEEEEcCCCCC--CChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccceeec
Q 022054 36 SVAFFHPNTND--GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEE 113 (303)
Q Consensus 36 rVa~~hp~l~~--~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~~~~ 113 (303)
||+|+..++.. .||+|+++.+++++|++.+.++. +++...+.... .... ..... .. +..
T Consensus 1 ~ili~~~~~~~~~~gG~~~~~~~l~~~L~~~~~~v~--~~~~~~~~~~~---~~~~---~~~~~------~~----~~~- 61 (365)
T cd03809 1 RILIDARFLASRRPTGIGRYARELLRALLKLDPEEV--LLLLPGAPGLL---LLPL---RAALR------LL----LRL- 61 (365)
T ss_pred CEEEechhhhcCCCCcHHHHHHHHHHHHHhcCCceE--EEEecCccccc---cccc---hhccc------cc----ccc-
Confidence 57888888865 79999999999999999876654 44432211110 0000 00000 00 000
Q ss_pred ccCCchhhhhHHHHHHHHHHHHHhccCCcEEEeCCCcccccceeeccCCeEEEEeecCCcchHHHhhhhccccccCchhh
Q 022054 114 STYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNAS 193 (303)
Q Consensus 114 ~~~~~~~l~~~~l~~~~~~~~~l~~~~pDv~i~t~~~~~~~pla~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~~ 193 (303)
.........+...........+.+||+++......... ...+.|.+..+|... .. . +.. .
T Consensus 62 ---~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~---~~~~~~~i~~~hd~~-~~---~--------~~~--~ 121 (365)
T cd03809 62 ---PRRLLWGLLFLLRAGDRLLLLLLGLDLLHSPHNTAPLL---RLRGVPVVVTIHDLI-PL---R--------FPE--Y 121 (365)
T ss_pred ---ccccccchhhHHHHHHHHHhhhcCCCeeeecccccCcc---cCCCCCEEEEeccch-hh---h--------Ccc--c
Confidence 00000011111111122334557899888664433111 345788999999533 00 0 000 0
Q ss_pred hhhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccCC------CCC
Q 022054 194 IAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPL------ERS 266 (303)
Q Consensus 194 ~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~-~~~~~VIYPPvd~~~~~~~~~------~~~ 266 (303)
.. ......+...++...+.+|.++++|+++++.+.+.++. +.++.|++++++.+.+..... ...
T Consensus 122 ------~~---~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~ 192 (365)
T cd03809 122 ------FS---PGFRRYFRRLLRRALRRADAIITVSEATKRDLLRYLGVPPDKIVVIPLGVDPRFRPPPAEAEVLRALYL 192 (365)
T ss_pred ------CC---HHHHHHHHHHHHHHHHHcCEEEEccHHHHHHHHHHhCcCHHHEEeeccccCccccCCCchHHHHHHhcC
Confidence 00 01122233345666789999999999999999999985 568899999999887753210 111
Q ss_pred CCCCEEEEEcCcccccChHHHHHHHHHcccCC
Q 022054 267 TEYPAIISVAQFRPEKVRYKLISTRHILFNLR 298 (303)
Q Consensus 267 ~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~~~ 298 (303)
.....++++||+.++||++.+++|+..+.++.
T Consensus 193 ~~~~~i~~~G~~~~~K~~~~~l~~~~~~~~~~ 224 (365)
T cd03809 193 LPRPYFLYVGTIEPRKNLERLLEAFARLPAKG 224 (365)
T ss_pred CCCCeEEEeCCCccccCHHHHHHHHHHHHHhc
Confidence 22578999999999999999999999997663
No 10
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.50 E-value=7.2e-13 Score=125.32 Aligned_cols=211 Identities=14% Similarity=0.098 Sum_probs=121.6
Q ss_pred CcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccceeec
Q 022054 34 TTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEE 113 (303)
Q Consensus 34 ~~rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~~~~ 113 (303)
+++|..+.+.+ ..||+|+++.+++++|.+.+.+. .+++... .+.+.+++.. ..++++.+....
T Consensus 1 ~~~il~ii~~~-~~GG~e~~~~~l~~~l~~~~~~~--~v~~~~~---~~~~~~~~~~-------~~i~~~~~~~~~---- 63 (374)
T TIGR03088 1 RPLIVHVVYRF-DVGGLENGLVNLINHLPADRYRH--AVVALTE---VSAFRKRIQR-------PDVAFYALHKQP---- 63 (374)
T ss_pred CceEEEEeCCC-CCCcHHHHHHHHHhhccccccce--EEEEcCC---CChhHHHHHh-------cCceEEEeCCCC----
Confidence 46899999999 57999999999999998875543 3444221 1122222221 122233332110
Q ss_pred ccCCchhhhhHHHHHHHHHHHHHhccCCcEEEeCCCcccccce-eeccCCeEEEEeecCCcchHHHhhhhccccccCchh
Q 022054 114 STYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPL-ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (303)
Q Consensus 114 ~~~~~~~l~~~~l~~~~~~~~~l~~~~pDv~i~t~~~~~~~pl-a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~ 192 (303)
...+ ..+....+.+++.+||+++.....+....+ ++..+.+.. +|... ..+ .++.
T Consensus 64 --~~~~-------~~~~~l~~~l~~~~~Divh~~~~~~~~~~~~~~~~~~~~~--i~~~h-~~~----------~~~~-- 119 (374)
T TIGR03088 64 --GKDV-------AVYPQLYRLLRQLRPDIVHTRNLAALEAQLPAALAGVPAR--IHGEH-GRD----------VFDL-- 119 (374)
T ss_pred --CCCh-------HHHHHHHHHHHHhCCCEEEEcchhHHHHHHHHHhcCCCeE--EEeec-Ccc----------cccc--
Confidence 0111 112223455678899998754221111011 223344432 33321 000 0000
Q ss_pred hhhhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccCCC-------
Q 022054 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLE------- 264 (303)
Q Consensus 193 ~~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~-~~~~~VIYPPvd~~~~~~~~~~------- 264 (303)
.+ +...+. ++.+...+.+|.+++.|+.+++.+.+.++. +.++.||||++|.+.+...+..
T Consensus 120 -------~~--~~~~~~---~~~~~~~~~~~~~i~vs~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~ 187 (374)
T TIGR03088 120 -------DG--SNWKYR---WLRRLYRPLIHHYVAVSRDLEDWLRGPVKVPPAKIHQIYNGVDTERFHPSRGDRSPILPP 187 (374)
T ss_pred -------hh--hHHHHH---HHHHHHHhcCCeEEEeCHHHHHHHHHhcCCChhhEEEeccCccccccCCCccchhhhhHh
Confidence 00 001111 122333466899999999999999998886 6678999999998877521100
Q ss_pred --CCCCCCEEEEEcCcccccChHHHHHHHHHcccC
Q 022054 265 --RSTEYPAIISVAQFRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 265 --~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~~ 297 (303)
.......++++||+.++||++.+|+|++.+.++
T Consensus 188 ~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~ 222 (374)
T TIGR03088 188 DFFADESVVVGTVGRLQAVKDQPTLVRAFALLVRQ 222 (374)
T ss_pred hcCCCCCeEEEEEecCCcccCHHHHHHHHHHHHHh
Confidence 011245889999999999999999999988654
No 11
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=99.49 E-value=1e-12 Score=126.00 Aligned_cols=215 Identities=15% Similarity=0.126 Sum_probs=122.7
Q ss_pred EEEEEcC-CCCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccceeecc
Q 022054 36 SVAFFHP-NTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (303)
Q Consensus 36 rVa~~hp-~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~~~~~ 114 (303)
||+++-+ +....||+|+.+.+++++|.+.+ +++.++|...+.... .+. ....+++..+....+...
T Consensus 1 kI~~v~~~~~p~~GG~e~~~~~la~~L~~~G--~~V~v~~~~~~~~~~---~~~-------~~~~i~v~~~p~~~~~~~- 67 (398)
T cd03796 1 RICMVSDFFYPNLGGVETHIYQLSQCLIKRG--HKVVVITHAYGNRVG---IRY-------LTNGLKVYYLPFVVFYNQ- 67 (398)
T ss_pred CeeEEeeccccccccHHHHHHHHHHHHHHcC--CeeEEEeccCCcCCC---ccc-------ccCceeEEEecceeccCC-
Confidence 3555544 33356999999999999999986 456787754311100 000 011112222211101000
Q ss_pred cCCchhhhhHHHHHHHHHHHHHhccCCcEEEeCCCcccccc---e-eeccCCeEEEEeecCCcchHHHhhhhccccccCc
Q 022054 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP---L-ARIFGCRVICYTHYPTISLDMISRVREGSSMYNN 190 (303)
Q Consensus 115 ~~~~~~l~~~~l~~~~~~~~~l~~~~pDv~i~t~~~~~~~p---l-a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~ 190 (303)
..+...+..+....+.+++.+||+++.......... + ++..+.|.+...|... . ...
T Consensus 68 -----~~~~~~~~~~~~l~~~~~~~~~DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~h~~~-~-------------~~~ 128 (398)
T cd03796 68 -----STLPTFFGTFPLLRNILIRERITIVHGHQAFSALAHEALLHARTMGLKTVFTDHSLF-G-------------FAD 128 (398)
T ss_pred -----ccccchhhhHHHHHHHHHhcCCCEEEECCCCchHHHHHHHHhhhcCCcEEEEecccc-c-------------ccc
Confidence 001111112222334466789999886543322111 1 2245678887777532 0 000
Q ss_pred hhhhhhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccCCCCCCCC
Q 022054 191 NASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLERSTEY 269 (303)
Q Consensus 191 ~~~~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~-~~~~~VIYPPvd~~~~~~~~~~~~~~~ 269 (303)
.. .... .+..++..+++|.++++|+..++.+....+. ++++.||||++|.+.+...+.....+.
T Consensus 129 ---------~~--~~~~----~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~k~~vi~ngvd~~~f~~~~~~~~~~~ 193 (398)
T cd03796 129 ---------AS--SIHT----NKLLRFSLADVDHVICVSHTSKENTVLRASLDPERVSVIPNAVDSSDFTPDPSKRDNDK 193 (398)
T ss_pred ---------hh--hHHh----hHHHHHhhccCCEEEEecHhHhhHHHHHhCCChhhEEEEcCccCHHHcCCCcccCCCCc
Confidence 00 0001 1123445688999999999999877655555 568899999999887752211111225
Q ss_pred CEEEEEcCcccccChHHHHHHHHHcccC
Q 022054 270 PAIISVAQFRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 270 ~~iLsvgRl~p~Kn~~llI~Afa~L~~~ 297 (303)
..++++||+.++||++.+|+|++.+.++
T Consensus 194 ~~i~~~grl~~~Kg~~~li~a~~~l~~~ 221 (398)
T cd03796 194 ITIVVISRLVYRKGIDLLVGIIPEICKK 221 (398)
T ss_pred eEEEEEeccchhcCHHHHHHHHHHHHhh
Confidence 6899999999999999999999987654
No 12
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.48 E-value=2.1e-12 Score=120.39 Aligned_cols=210 Identities=13% Similarity=0.015 Sum_probs=121.5
Q ss_pred EEEEEcCC--CCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccceeec
Q 022054 36 SVAFFHPN--TNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEE 113 (303)
Q Consensus 36 rVa~~hp~--l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~~~~ 113 (303)
||||++.. ....||+|+++.+++++|++.+.++ .+++........ ....+.++++.+....
T Consensus 1 ~i~~i~~~~~~~~~gG~~~~~~~la~~L~~~g~~v--~v~~~~~~~~~~-----------~~~~~~i~~~~~~~~~---- 63 (363)
T cd04955 1 KIAIIGTRGIPAKYGGFETFVEELAPRLVARGHEV--TVYCRSPYPKQK-----------ETEYNGVRLIHIPAPE---- 63 (363)
T ss_pred CeEEEecCcCCcccCcHHHHHHHHHHHHHhcCCCE--EEEEccCCCCCc-----------ccccCCceEEEcCCCC----
Confidence 57888653 3467999999999999999987554 555543211110 0011222233322110
Q ss_pred ccCCchhhhhHHHHHHHHHHHHH-hccCCcEEEeCCCcccccce---eeccCCeEEEEeecCCcchHHHhhhhccccccC
Q 022054 114 STYPRFTMIGQSFGSVYLSWEAL-CKFTPLYYFDTSGYAFTYPL---ARIFGCRVICYTHYPTISLDMISRVREGSSMYN 189 (303)
Q Consensus 114 ~~~~~~~l~~~~l~~~~~~~~~l-~~~~pDv~i~t~~~~~~~pl---a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~ 189 (303)
........+ .+...++.+ .+.++|++++.... ..+. +...+.|++..+|....... .
T Consensus 64 -~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~v~~~h~~~~~~~----------~-- 124 (363)
T cd04955 64 -IGGLGTIIY----DILAILHALFVKRDIDHVHALGPA--IAPFLPLLRLKGKKVVVNMDGLEWKRA----------K-- 124 (363)
T ss_pred -ccchhhhHH----HHHHHHHHHhccCCeEEEEecCcc--HHHHHHHHHhcCCCEEEEccCcceeec----------c--
Confidence 001001111 111122222 34567776654322 1222 22347888888886431100 0
Q ss_pred chhhhhhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccc-c---CCCC
Q 022054 190 NNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQV-L---PLER 265 (303)
Q Consensus 190 ~~~~~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~~-~---~~~~ 265 (303)
.+. ..++++.+..+...+.+|.++++|+++++.+++.+| .+..+|+|++|.+.+.. . ....
T Consensus 125 ----------~~~---~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~--~~~~~i~ngv~~~~~~~~~~~~~~~~ 189 (363)
T cd04955 125 ----------WGR---PAKRYLKFGEKLAVKFADRLIADSPGIKEYLKEKYG--RDSTYIPYGADHVVSSEEDEILKKYG 189 (363)
T ss_pred ----------ccc---chhHHHHHHHHHHHhhccEEEeCCHHHHHHHHHhcC--CCCeeeCCCcChhhcchhhhhHHhcC
Confidence 000 111223333556678899999999999999998888 44599999999876542 0 0001
Q ss_pred CCCCCEEEEEcCcccccChHHHHHHHHHccc
Q 022054 266 STEYPAIISVAQFRPEKVRYKLISTRHILFN 296 (303)
Q Consensus 266 ~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~ 296 (303)
..++++++++||+.++||++.+++|++.+.+
T Consensus 190 ~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~ 220 (363)
T cd04955 190 LEPGRYYLLVGRIVPENNIDDLIEAFSKSNS 220 (363)
T ss_pred CCCCcEEEEEecccccCCHHHHHHHHHhhcc
Confidence 1225689999999999999999999998864
No 13
>PRK10307 putative glycosyl transferase; Provisional
Probab=99.46 E-value=3.1e-12 Score=123.08 Aligned_cols=241 Identities=9% Similarity=-0.063 Sum_probs=128.8
Q ss_pred cEEEEEcC-CCCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhh-ccCccccCCCeEEEccccceee
Q 022054 35 TSVAFFHP-NTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVD-RFGVELLHPPKVVHLYRRKWIE 112 (303)
Q Consensus 35 ~rVa~~hp-~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~-~~~~~l~~~~~~i~L~~~~~~~ 112 (303)
|||+++.. +.-..||+|+.+.+++++|.+.|. ++.++|.....+.........+ .+..+..+.+++..+.. +..
T Consensus 1 mkIlii~~~~~P~~~g~~~~~~~l~~~L~~~G~--~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~r~~~--~~~ 76 (412)
T PRK10307 1 MKILVYGINYAPELTGIGKYTGEMAEWLAARGH--EVRVITAPPYYPQWRVGEGYSAWRYRRESEGGVTVWRCPL--YVP 76 (412)
T ss_pred CeEEEEecCCCCCccchhhhHHHHHHHHHHCCC--eEEEEecCCCCCCCCCCcccccccceeeecCCeEEEEccc--cCC
Confidence 58888875 334458999999999999999864 5577775421110000000000 00011112223332211 110
Q ss_pred cccCCchhhhhHHHHHHHHHHHHH-h--ccCCcEEEeCCCcccccce----eeccCCeEEEEeecCCcchHHHhhhhccc
Q 022054 113 ESTYPRFTMIGQSFGSVYLSWEAL-C--KFTPLYYFDTSGYAFTYPL----ARIFGCRVICYTHYPTISLDMISRVREGS 185 (303)
Q Consensus 113 ~~~~~~~~l~~~~l~~~~~~~~~l-~--~~~pDv~i~t~~~~~~~pl----a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~ 185 (303)
.. .....-..........+++.+ + +.+||+++.+....+..+. ++..+.|.++.+|.-. .+. ..+.
T Consensus 77 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Div~~~~p~~~~~~~~~~~~~~~~~~~v~~~~d~~--~~~---~~~~- 149 (412)
T PRK10307 77 KQ-PSGLKRLLHLGSFALSSFFPLLAQRRWRPDRVIGVVPTLFCAPGARLLARLSGARTWLHIQDYE--VDA---AFGL- 149 (412)
T ss_pred CC-ccHHHHHHHHHHHHHHHHHHHhhccCCCCCEEEEeCCcHHHHHHHHHHHHhhCCCEEEEeccCC--HHH---HHHh-
Confidence 00 000000111111111112221 1 2689988865433222222 2345678777666321 110 0000
Q ss_pred cccCchhhhhhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccCCC
Q 022054 186 SMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLE 264 (303)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~-~~~~~VIYPPvd~~~~~~~~~~ 264 (303)
+... +....+++.++.++.++.+|.|++.|+.+++.+++. +. ++++.||||++|.+.+...+..
T Consensus 150 -----------~~~~---~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~-~~~~~~i~vi~ngvd~~~~~~~~~~ 214 (412)
T PRK10307 150 -----------GLLK---GGKVARLATAFERSLLRRFDNVSTISRSMMNKAREK-GVAAEKVIFFPNWSEVARFQPVADA 214 (412)
T ss_pred -----------CCcc---CcHHHHHHHHHHHHHHhhCCEEEecCHHHHHHHHHc-CCCcccEEEECCCcCHhhcCCCCcc
Confidence 0000 011223344456677789999999999999999875 55 5689999999998876521110
Q ss_pred ----------CCCCCCEEEEEcCcccccChHHHHHHHHHcccCCCCC
Q 022054 265 ----------RSTEYPAIISVAQFRPEKVRYKLISTRHILFNLRHFQ 301 (303)
Q Consensus 265 ----------~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~~~~~~ 301 (303)
.......++++||+.++||++.+|+|++.+++...++
T Consensus 215 ~~~~~~~~~~~~~~~~~i~~~G~l~~~kg~~~li~a~~~l~~~~~~~ 261 (412)
T PRK10307 215 DVDALRAQLGLPDGKKIVLYSGNIGEKQGLELVIDAARRLRDRPDLI 261 (412)
T ss_pred chHHHHHHcCCCCCCEEEEEcCccccccCHHHHHHHHHHhccCCCeE
Confidence 0122468999999999999999999999986543344
No 14
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=99.46 E-value=1.7e-12 Score=120.73 Aligned_cols=196 Identities=16% Similarity=0.080 Sum_probs=122.1
Q ss_pred EcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccceeecccCCch
Q 022054 40 FHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRF 119 (303)
Q Consensus 40 ~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~~~~~~~~~~ 119 (303)
++|.+ ..||+|+++.+++++|.+.+ +++.+++..+. .. ..++. .+++ ++.+... . .
T Consensus 3 ~~~~~-~~gG~e~~~~~l~~~L~~~g--~~v~v~~~~~~-~~----~~~~~-~~~~------~~~~~~~--------~-~ 58 (355)
T cd03819 3 VLPAL-ESGGVERGTLELARALVERG--HRSLVASAGGR-LV----AELEA-EGSR------HIKLPFI--------S-K 58 (355)
T ss_pred cchhh-ccCcHHHHHHHHHHHHHHcC--CEEEEEcCCCc-hH----HHHHh-cCCe------EEEcccc--------c-c
Confidence 46888 46999999999999999975 55666664331 11 11111 1221 2211100 0 0
Q ss_pred hhhhHHHHHHHHHHHHHhccCCcEEEeCCCcccccce-e-eccCCeEEEEeecCCcchHHHhhhhccccccCchhhhhhc
Q 022054 120 TMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPL-A-RIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQS 197 (303)
Q Consensus 120 ~l~~~~l~~~~~~~~~l~~~~pDv~i~t~~~~~~~pl-a-~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~~~~~~ 197 (303)
. .+..+.......+.+++.+||+++..+........ + ...+.|.++.+|....
T Consensus 59 ~-~~~~~~~~~~l~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~------------------------ 113 (355)
T cd03819 59 N-PLRILLNVARLRRLIREEKVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYS------------------------ 113 (355)
T ss_pred c-hhhhHHHHHHHHHHHHHcCCCEEEECCCchhHHHHHHHHhcCCCEEEEeCCchh------------------------
Confidence 0 01111122223445678899987765432211111 1 2346888888886330
Q ss_pred hhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccCCC------------
Q 022054 198 NWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLE------------ 264 (303)
Q Consensus 198 ~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~-~~~~~VIYPPvd~~~~~~~~~~------------ 264 (303)
. ... +....+.+|.++++|+++++.+++.++. +.++.+|++++|.+.+......
T Consensus 114 --~---~~~--------~~~~~~~~~~vi~~s~~~~~~~~~~~~~~~~k~~~i~ngi~~~~~~~~~~~~~~~~~~~~~~~ 180 (355)
T cd03819 114 --V---NFR--------YNAIMARGDRVIAVSNFIADHIRENYGVDPDRIRVIPRGVDLDRFDPGAVPPERILALAREWP 180 (355)
T ss_pred --h---HHH--------HHHHHHhcCEEEEeCHHHHHHHHHhcCCChhhEEEecCCccccccCccccchHHHHHHHHHcC
Confidence 0 001 2223367999999999999999988887 6789999999998877532110
Q ss_pred CCCCCCEEEEEcCcccccChHHHHHHHHHcccC
Q 022054 265 RSTEYPAIISVAQFRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 265 ~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~~ 297 (303)
.......++++||+.++|+++.+++|++.++++
T Consensus 181 ~~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~ 213 (355)
T cd03819 181 LPKGKPVILLPGRLTRWKGQEVFIEALARLKKD 213 (355)
T ss_pred CCCCceEEEEeeccccccCHHHHHHHHHHHHhc
Confidence 112246799999999999999999999998764
No 15
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.45 E-value=1.8e-12 Score=121.58 Aligned_cols=216 Identities=14% Similarity=0.042 Sum_probs=125.2
Q ss_pred cEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccceeecc
Q 022054 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (303)
Q Consensus 35 ~rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~~~~~ 114 (303)
|||+++++- ..||+|+++.+++++|.+.++++ .++|...+.... ... +.+.+........ +..
T Consensus 1 mki~~~~~p--~~gG~~~~~~~la~~L~~~G~~v--~v~~~~~~~~~~---~~~---------~~~~~~~~~~~~~-~~~ 63 (371)
T cd04962 1 MKIGIVCYP--TYGGSGVVATELGKALARRGHEV--HFITSSRPFRLD---EYS---------PNIFFHEVEVPQY-PLF 63 (371)
T ss_pred CceeEEEEe--CCCCccchHHHHHHHHHhcCCce--EEEecCCCcchh---hhc---------cCeEEEEeccccc-chh
Confidence 578888742 46999999999999999987654 566654311100 000 0111111110000 000
Q ss_pred cCCchhhhhHHHHHHHHHHHHHhccCCcEEEeCCCcccccc--ee-ec---cCCeEEEEeecCCcchHHHhhhhcccccc
Q 022054 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LA-RI---FGCRVICYTHYPTISLDMISRVREGSSMY 188 (303)
Q Consensus 115 ~~~~~~l~~~~l~~~~~~~~~l~~~~pDv~i~t~~~~~~~p--la-~~---~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~ 188 (303)
..+. + .........+.+++.+||+++.........+ ++ +. .+.|.+..+|...... .
T Consensus 64 ~~~~----~-~~~~~~~l~~~i~~~~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~------~------ 126 (371)
T cd04962 64 QYPP----Y-DLALASKIAEVAKRYKLDLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDITL------V------ 126 (371)
T ss_pred hcch----h-HHHHHHHHHHHHhcCCccEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCcccc------c------
Confidence 0000 1 1111222345567889998875433222222 11 11 2678888888654100 0
Q ss_pred CchhhhhhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCC-----
Q 022054 189 NNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL----- 263 (303)
Q Consensus 189 ~~~~~~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~~~~~----- 263 (303)
. . ...+ .++.+...+++|.+++.|+..++.+.+.++...++.|++|++|...+...+.
T Consensus 127 ~------~-------~~~~----~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~i~vi~n~~~~~~~~~~~~~~~~~ 189 (371)
T cd04962 127 G------Q-------DPSF----QPATRFSIEKSDGVTAVSESLRQETYELFDITKEIEVIPNFVDEDRFRPKPDEALKR 189 (371)
T ss_pred c------c-------cccc----hHHHHHHHhhCCEEEEcCHHHHHHHHHhcCCcCCEEEecCCcCHhhcCCCchHHHHH
Confidence 0 0 0001 1123445678999999999999999988754567899999999876542110
Q ss_pred --CCCCCCCEEEEEcCcccccChHHHHHHHHHcccCCCCC
Q 022054 264 --ERSTEYPAIISVAQFRPEKVRYKLISTRHILFNLRHFQ 301 (303)
Q Consensus 264 --~~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~~~~~~ 301 (303)
.....+..++++||+.++|+++.+|+|+..+.++..++
T Consensus 190 ~~~~~~~~~~il~~g~l~~~K~~~~li~a~~~l~~~~~~~ 229 (371)
T cd04962 190 RLGAPEGEKVLIHISNFRPVKRIDDVIRIFAKVRKEVPAR 229 (371)
T ss_pred hcCCCCCCeEEEEecccccccCHHHHHHHHHHHHhcCCce
Confidence 01112467899999999999999999999987654444
No 16
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=99.43 E-value=2.9e-12 Score=121.27 Aligned_cols=202 Identities=16% Similarity=0.196 Sum_probs=119.9
Q ss_pred cEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccceeecc
Q 022054 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (303)
Q Consensus 35 ~rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~~~~~ 114 (303)
|||+++.+.....||+|+++.+++++|.+.+.++++.+++....... ...+.+ +.... ...+.+.
T Consensus 1 mkI~~~~~~~~~~GG~e~~~~~l~~~L~~~~~g~~v~v~~~~~~~~~-~~~~~~----~~~~~--~~~~~~~-------- 65 (359)
T PRK09922 1 MKIAFIGEAVSGFGGMETVISNVINTFEESKINCEMFFFCRNDKMDK-AWLKEI----KYAQS--FSNIKLS-------- 65 (359)
T ss_pred CeeEEecccccCCCchhHHHHHHHHHhhhcCcceeEEEEecCCCCCh-HHHHhc----chhcc--cccchhh--------
Confidence 68999999887789999999999999999866777777775431111 111111 10000 0000000
Q ss_pred cCCchhhhhHHHHHHHHHHHHHhccCCcEEEeCCCcccccc-ee-eccC--CeEEEEeecCCcchHHHhhhhccccccCc
Q 022054 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-LA-RIFG--CRVICYTHYPTISLDMISRVREGSSMYNN 190 (303)
Q Consensus 115 ~~~~~~l~~~~l~~~~~~~~~l~~~~pDv~i~t~~~~~~~p-la-~~~~--~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~ 190 (303)
..... .......+.+++.+||++++....+.... ++ ...+ .+++...|... ..
T Consensus 66 ---~~~~~----~~~~~l~~~l~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~------~~---------- 122 (359)
T PRK09922 66 ---FLRRA----KHVYNFSKWLKETQPDIVICIDVISCLYANKARKKSGKQFKIFSWPHFSL------DH---------- 122 (359)
T ss_pred ---hhccc----HHHHHHHHHHHhcCCCEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCcc------cc----------
Confidence 00000 01112234577889999887643222111 11 1223 34555566532 00
Q ss_pred hhhhhhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccCCCCCCCC
Q 022054 191 NASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLERSTEY 269 (303)
Q Consensus 191 ~~~~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~-~~~~~VIYPPvd~~~~~~~~~~~~~~~ 269 (303)
.. . + .. .....+|.++++|+++++.+.+. |+ +.++.|||||+|.+.+.. +......+
T Consensus 123 ----------~~-~--~-~~------~~~~~~d~~i~~S~~~~~~~~~~-~~~~~ki~vi~N~id~~~~~~-~~~~~~~~ 180 (359)
T PRK09922 123 ----------KK-H--A-EC------KKITCADYHLAISSGIKEQMMAR-GISAQRISVIYNPVEIKTIII-PPPERDKP 180 (359)
T ss_pred ----------cc-h--h-hh------hhhhcCCEEEEcCHHHHHHHHHc-CCCHHHEEEEcCCCCHHHccC-CCcccCCC
Confidence 00 0 0 00 00157999999999999999874 65 567999999999765532 11111225
Q ss_pred CEEEEEcCcc--cccChHHHHHHHHHccc
Q 022054 270 PAIISVAQFR--PEKVRYKLISTRHILFN 296 (303)
Q Consensus 270 ~~iLsvgRl~--p~Kn~~llI~Afa~L~~ 296 (303)
..++++||+. ++|+++.+++|++.+.+
T Consensus 181 ~~i~~~Grl~~~~~k~~~~l~~a~~~~~~ 209 (359)
T PRK09922 181 AVFLYVGRLKFEGQKNVKELFDGLSQTTG 209 (359)
T ss_pred cEEEEEEEEecccCcCHHHHHHHHHhhCC
Confidence 7899999996 56999999999998754
No 17
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=99.43 E-value=4.4e-12 Score=115.41 Aligned_cols=209 Identities=21% Similarity=0.244 Sum_probs=127.0
Q ss_pred EEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccceeeccc
Q 022054 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (303)
Q Consensus 36 rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~~~~~~ 115 (303)
||+++++... +||+++++.+++++|.+.+. ++.+++...+.... ..... ... ...... ....
T Consensus 1 kIl~~~~~~~-~gG~~~~~~~l~~~l~~~g~--~v~v~~~~~~~~~~---~~~~~--~~~---~~~~~~-----~~~~-- 62 (353)
T cd03811 1 KILFVIPSLG-GGGAERVLLNLANGLDKRGY--DVTLVVLRDEGDYL---ELLPS--NVK---LIPVRV-----LKLK-- 62 (353)
T ss_pred CeEEEeeccc-CCCcchhHHHHHHHHHhcCc--eEEEEEcCCCCccc---ccccc--chh---hhceee-----eecc--
Confidence 6899999994 89999999999999987754 45566543211100 00000 000 000000 0000
Q ss_pred CCchhhhhHHHHHHHHHHHHHhccCCcEEEeCCC-cccccce-eeccCCeEEEEeecCCcchHHHhhhhccccccCchhh
Q 022054 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSG-YAFTYPL-ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNAS 193 (303)
Q Consensus 116 ~~~~~l~~~~l~~~~~~~~~l~~~~pDv~i~t~~-~~~~~pl-a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~~ 193 (303)
. .... . ......+.+++.+||+++.... ....... ....+.|.+.++|... .... .
T Consensus 63 -~-~~~~-~---~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~----~----------- 120 (353)
T cd03811 63 -S-LRDL-L---AILRLRRLLRKEKPDVVISHLTTTPNVLALLAARLGTKLIVWEHNSL-SLEL----K----------- 120 (353)
T ss_pred -c-ccch-h---HHHHHHHHHHhcCCCEEEEcCccchhHHHHHHhhcCCceEEEEcCcc-hhhh----c-----------
Confidence 0 0000 0 1122334467789998776544 2211111 1112578999999865 1100 0
Q ss_pred hhhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccCC-----CCCC
Q 022054 194 IAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPL-----ERST 267 (303)
Q Consensus 194 ~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~-~~~~~VIYPPvd~~~~~~~~~-----~~~~ 267 (303)
...... .......+.+|.++++|+++++.+.+.++. ..++.|++||++.+.+..... ....
T Consensus 121 --------~~~~~~-----~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~ 187 (353)
T cd03811 121 --------RKLRLL-----LLIRKLYRRADKIVAVSEGVKEDLLKLLGIPPDKIEVIYNPIDIEEIRALAEEPLELGIPP 187 (353)
T ss_pred --------cchhHH-----HHHHhhccccceEEEeccchhhhHHHhhcCCccccEEecCCcChhhcCcccchhhhcCCCC
Confidence 000000 234566789999999999999999999986 578999999999887753211 1122
Q ss_pred CCCEEEEEcCcccccChHHHHHHHHHcccC
Q 022054 268 EYPAIISVAQFRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 268 ~~~~iLsvgRl~p~Kn~~llI~Afa~L~~~ 297 (303)
....++++||+.+.||++.+++|+..+.++
T Consensus 188 ~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~ 217 (353)
T cd03811 188 DGPVILAVGRLSPQKGFDTLIRAFALLRKE 217 (353)
T ss_pred CceEEEEEecchhhcChHHHHHHHHHhhhc
Confidence 357899999999999999999999998764
No 18
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=99.42 E-value=4.8e-12 Score=121.09 Aligned_cols=83 Identities=19% Similarity=0.200 Sum_probs=66.0
Q ss_pred HHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccC-------CCCCCCCCEEEEEcCcccccChHH
Q 022054 215 YGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLP-------LERSTEYPAIISVAQFRPEKVRYK 286 (303)
Q Consensus 215 ~~~~~~~ad~viaNS~~t~~~i~~~~~~-~~~~~VIYPPvd~~~~~~~~-------~~~~~~~~~iLsvgRl~p~Kn~~l 286 (303)
.+...+.+|.++++|+.+++.+.+.++. +.++.+|+|++|.+.+.... ..-..++++++++||+.++||++.
T Consensus 157 e~~~~~~~d~vi~~s~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~K~~~~ 236 (405)
T TIGR03449 157 EQQLVDNADRLIANTDEEARDLVRHYDADPDRIDVVAPGADLERFRPGDRATERARLGLPLDTKVVAFVGRIQPLKAPDV 236 (405)
T ss_pred HHHHHHhcCeEEECCHHHHHHHHHHcCCChhhEEEECCCcCHHHcCCCcHHHHHHhcCCCCCCcEEEEecCCCcccCHHH
Confidence 3445688999999999999999998886 56789999999987774211 000122578999999999999999
Q ss_pred HHHHHHHcccC
Q 022054 287 LISTRHILFNL 297 (303)
Q Consensus 287 lI~Afa~L~~~ 297 (303)
+|+|++.+.++
T Consensus 237 li~a~~~l~~~ 247 (405)
T TIGR03449 237 LLRAVAELLDR 247 (405)
T ss_pred HHHHHHHHHhh
Confidence 99999988554
No 19
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=99.40 E-value=1.5e-11 Score=120.57 Aligned_cols=220 Identities=17% Similarity=0.204 Sum_probs=125.8
Q ss_pred CCCcEEEEE-cCC-CCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccc
Q 022054 32 NRTTSVAFF-HPN-TNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRK 109 (303)
Q Consensus 32 ~~~~rVa~~-hp~-l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~ 109 (303)
.++|||+++ +|+ ....||+|+.+.+++++|.+.+ +++.++|...+.. + ...+.. ++....
T Consensus 56 ~~~mrI~~~~~~~~~~~~gG~~~~~~~l~~~L~~~G--~eV~vlt~~~~~~-~-------~~~g~~------v~~~~~-- 117 (465)
T PLN02871 56 SRPRRIALFVEPSPFSYVSGYKNRFQNFIRYLREMG--DEVLVVTTDEGVP-Q-------EFHGAK------VIGSWS-- 117 (465)
T ss_pred CCCceEEEEECCcCCcccccHHHHHHHHHHHHHHCC--CeEEEEecCCCCC-c-------cccCce------eeccCC--
Confidence 567999977 543 3356999999999999999976 4556777543211 0 001111 111000
Q ss_pred eeecccCCchhhhhHHHHHHHHHHHHHhccCCcEEEeCCCcccccc-e--eeccCCeEEEEeecCCcchHHHhhhhcccc
Q 022054 110 WIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-L--ARIFGCRVICYTHYPTISLDMISRVREGSS 186 (303)
Q Consensus 110 ~~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~pDv~i~t~~~~~~~p-l--a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~ 186 (303)
...+. +..+.. . +.......+.+++.+||+++.+.......+ + +...+.|++..+|.-. ...+..
T Consensus 118 ~~~~~-~~~~~~--~-~~~~~~l~~~i~~~kpDiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~-~~~~~~------- 185 (465)
T PLN02871 118 FPCPF-YQKVPL--S-LALSPRIISEVARFKPDLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHV-PVYIPR------- 185 (465)
T ss_pred cCCcc-CCCcee--e-ccCCHHHHHHHHhCCCCEEEECCCchhHHHHHHHHHHhCCCEEEEEecCc-hhhhhc-------
Confidence 00000 000000 0 000012334567789998775533221111 1 2345788888888522 000000
Q ss_pred ccCchhhhhhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccC---
Q 022054 187 MYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLP--- 262 (303)
Q Consensus 187 ~~~~~~~~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~-~~~~~VIYPPvd~~~~~~~~--- 262 (303)
+. .....+.. +. +.++..+.+|.++++|+.+++.+.+.+.. .+++.|+|+++|++.+....
T Consensus 186 -~~---------~~~~~~~~-~~----~~r~~~~~ad~ii~~S~~~~~~l~~~~~~~~~kv~vi~nGvd~~~f~p~~~~~ 250 (465)
T PLN02871 186 -YT---------FSWLVKPM-WD----IIRFLHRAADLTLVTSPALGKELEAAGVTAANRIRVWNKGVDSESFHPRFRSE 250 (465)
T ss_pred -cc---------chhhHHHH-HH----HHHHHHhhCCEEEECCHHHHHHHHHcCCCCcCeEEEeCCccCccccCCccccH
Confidence 00 00011111 22 23445578999999999999999987633 47899999999998775210
Q ss_pred -----CC-CCCCCCEEEEEcCcccccChHHHHHHHHHccc
Q 022054 263 -----LE-RSTEYPAIISVAQFRPEKVRYKLISTRHILFN 296 (303)
Q Consensus 263 -----~~-~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~ 296 (303)
.. .....++++++||+.++|+++.+++|++.+++
T Consensus 251 ~~~~~~~~~~~~~~~i~~vGrl~~~K~~~~li~a~~~~~~ 290 (465)
T PLN02871 251 EMRARLSGGEPEKPLIVYVGRLGAEKNLDFLKRVMERLPG 290 (465)
T ss_pred HHHHHhcCCCCCCeEEEEeCCCchhhhHHHHHHHHHhCCC
Confidence 00 11124689999999999999999999998753
No 20
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=99.40 E-value=1.9e-11 Score=111.25 Aligned_cols=203 Identities=17% Similarity=0.110 Sum_probs=122.1
Q ss_pred EEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccceeeccc
Q 022054 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (303)
Q Consensus 36 rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~~~~~~ 115 (303)
||+|+.+++...||+|+++.+++++|.+.+ +++.+++...+.. . .....+.+.+..+......
T Consensus 1 kI~i~~~~~~~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~---------~--~~~~~~~~~~~~~~~~~~~---- 63 (348)
T cd03820 1 KILFVIPSLGNAGGAERVLSNLANALAEKG--HEVTIISLDKGEP---------P--FYELDPKIKVIDLGDKRDS---- 63 (348)
T ss_pred CeEEEeccccCCCChHHHHHHHHHHHHhCC--CeEEEEecCCCCC---------C--ccccCCccceeeccccccc----
Confidence 589999999658999999999999999865 5556666543110 0 0011222222222110000
Q ss_pred CCchhhhhHHHHHHHHHHHHHhccCCcEEEeCCCcccccc-eee-ccC-CeEEEEeecCCcchHHHhhhhccccccCchh
Q 022054 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-LAR-IFG-CRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (303)
Q Consensus 116 ~~~~~l~~~~l~~~~~~~~~l~~~~pDv~i~t~~~~~~~p-la~-~~~-~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~ 192 (303)
.....+.......+.+++.+||+++...+. ... ++. ..+ .|++..+|......
T Consensus 64 -----~~~~~~~~~~~~~~~l~~~~~d~i~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~----------------- 119 (348)
T cd03820 64 -----KLLARFKKLRRLRKLLKNNKPDVVISFLTS--LLTFLASLGLKIVKLIVSEHNSPDAY----------------- 119 (348)
T ss_pred -----chhccccchHHHHHhhcccCCCEEEEcCch--HHHHHHHHhhccccEEEecCCCccch-----------------
Confidence 000001112223445677899988866543 111 121 234 48888888755100
Q ss_pred hhhhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCCCCCCCCCEE
Q 022054 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAI 272 (303)
Q Consensus 193 ~~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~~~~~~~~~~~~~i 272 (303)
... .. +.. ..+...+.+|.+++.|+.++....... +.++.|++||++.+.+... ...+++.+
T Consensus 120 -------~~~-~~--~~~---~~~~~~~~~d~ii~~s~~~~~~~~~~~--~~~~~vi~~~~~~~~~~~~---~~~~~~~i 181 (348)
T cd03820 120 -------KKR-LR--RLL---LRRLLYRRADAVVVLTEEDRALYYKKF--NKNVVVIPNPLPFPPEEPS---SDLKSKRI 181 (348)
T ss_pred -------hhh-hH--HHH---HHHHHHhcCCEEEEeCHHHHHHhhccC--CCCeEEecCCcChhhcccc---CCCCCcEE
Confidence 000 00 000 244556889999999999983333222 5789999999998766421 12236799
Q ss_pred EEEcCcccccChHHHHHHHHHcccC
Q 022054 273 ISVAQFRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 273 LsvgRl~p~Kn~~llI~Afa~L~~~ 297 (303)
+++||+.++|+++.+++|++.+.+.
T Consensus 182 ~~~g~~~~~K~~~~l~~~~~~l~~~ 206 (348)
T cd03820 182 LAVGRLVPQKGFDLLIEAWAKIAKK 206 (348)
T ss_pred EEEEeeccccCHHHHHHHHHHHHhc
Confidence 9999999999999999999998653
No 21
>PRK10125 putative glycosyl transferase; Provisional
Probab=99.39 E-value=2.4e-11 Score=117.46 Aligned_cols=81 Identities=19% Similarity=0.195 Sum_probs=60.0
Q ss_pred HHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCccc---cc-CCCCCCCCCEEEEEcCc--ccccChHHHH
Q 022054 215 YGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQ---VL-PLERSTEYPAIISVAQF--RPEKVRYKLI 288 (303)
Q Consensus 215 ~~~~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~---~~-~~~~~~~~~~iLsvgRl--~p~Kn~~llI 288 (303)
++...+.++.+|+.|+|+++.+.+.++ ..++.||||++|++.+. .. +.......+.++++||. .+.|+++.+|
T Consensus 184 ~~~~~~~~~~iV~~S~~l~~~~~~~~~-~~~i~vI~NGid~~~~~~~~~~~~~~~~~~~~~il~v~~~~~~~~Kg~~~li 262 (405)
T PRK10125 184 FREMLALGCQFISPSQHVADAFNSLYG-PGRCRIINNGIDMATEAILAELPPVRETQGKPKIAVVAHDLRYDGKTDQQLV 262 (405)
T ss_pred HHHHhhcCcEEEEcCHHHHHHHHHHcC-CCCEEEeCCCcCcccccccccccccccCCCCCEEEEEEeccccCCccHHHHH
Confidence 333446689999999999999999887 47899999999975322 11 11111224689999994 3789999999
Q ss_pred HHHHHccc
Q 022054 289 STRHILFN 296 (303)
Q Consensus 289 ~Afa~L~~ 296 (303)
+|++.+.+
T Consensus 263 ~A~~~l~~ 270 (405)
T PRK10125 263 REMMALGD 270 (405)
T ss_pred HHHHhCCC
Confidence 99998753
No 22
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=99.39 E-value=1.1e-11 Score=117.30 Aligned_cols=214 Identities=16% Similarity=0.154 Sum_probs=123.6
Q ss_pred cEEEEEcCCCCC--CChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccceee
Q 022054 35 TSVAFFHPNTND--GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIE 112 (303)
Q Consensus 35 ~rVa~~hp~l~~--~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~~~ 112 (303)
|+|++++++.-- .||+|+.+.+++++|.+. .++++. +... .. .. .-+.. +..... +
T Consensus 1 mkI~~i~~~~~p~~~GG~~~~v~~l~~~l~~~-~~v~v~--~~~~--~~------~~-~~~~~------~~~~~~--~-- 58 (388)
T TIGR02149 1 MKVTVLTREYPPNVYGGAGVHVEELTRELARL-MDVDVR--CFGD--QR------FD-SEGLT------VKGYRP--W-- 58 (388)
T ss_pred CeeEEEecccCccccccHhHHHHHHHHHHHHh-cCeeEE--cCCC--ch------hc-CCCeE------EEEecC--h--
Confidence 689999887642 499999999999999886 466543 3221 11 00 00111 111110 0
Q ss_pred cccCCchhhhhHHHHHHHHHHH-HHhccCCcEEEeCCCcccccce-e-eccCCeEEEEeecCCcchHHHhhhhccccccC
Q 022054 113 ESTYPRFTMIGQSFGSVYLSWE-ALCKFTPLYYFDTSGYAFTYPL-A-RIFGCRVICYTHYPTISLDMISRVREGSSMYN 189 (303)
Q Consensus 113 ~~~~~~~~l~~~~l~~~~~~~~-~l~~~~pDv~i~t~~~~~~~pl-a-~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~ 189 (303)
....-..+.+..+...+. .....++|+++.....+...+. + +..+.|++...|.... . + .|...
T Consensus 59 ----~~~~~~~~~~~~~~~~~~~~~~~~~~divh~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~-~---~-~~~~~---- 125 (388)
T TIGR02149 59 ----SELKEANKALGTFSVDLAMANDPVDADVVHSHTWYTFLAGHLAKKLYDKPLVVTAHSLEP-L---R-PWKEE---- 125 (388)
T ss_pred ----hhccchhhhhhhhhHHHHHhhCCCCCCeEeecchhhhhHHHHHHHhcCCCEEEEeecccc-c---c-ccccc----
Confidence 000000111111111111 1223469998865433322221 2 2457899988886320 0 0 01000
Q ss_pred chhhhhhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHh-CC-CCCceEEcCCCCCCcccccC-----
Q 022054 190 NNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLW-GI-PDRIKRVYPPCDTSGLQVLP----- 262 (303)
Q Consensus 190 ~~~~~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~-~~-~~~~~VIYPPvd~~~~~~~~----- 262 (303)
.... .+.+..++.+...+.+|.++++|+.+++.+.+.+ +. +.++.||+|++|.+.+....
T Consensus 126 ------------~~~~-~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~~~i~vi~ng~~~~~~~~~~~~~~~ 192 (388)
T TIGR02149 126 ------------QLGG-GYKLSSWAEKTAIEAADRVIAVSGGMREDILKYYPDLDPEKVHVIYNGIDTKEYKPDDGNVVL 192 (388)
T ss_pred ------------cccc-chhHHHHHHHHHHhhCCEEEEccHHHHHHHHHHcCCCCcceEEEecCCCChhhcCCCchHHHH
Confidence 0000 0122334456677899999999999999999988 54 56789999999987764210
Q ss_pred --CCCCCCCCEEEEEcCcccccChHHHHHHHHHccc
Q 022054 263 --LERSTEYPAIISVAQFRPEKVRYKLISTRHILFN 296 (303)
Q Consensus 263 --~~~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~ 296 (303)
..-....++++++||+.++|+++.+++|++++.+
T Consensus 193 ~~~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~ 228 (388)
T TIGR02149 193 DRYGIDRSRPYILFVGRITRQKGVPHLLDAVHYIPK 228 (388)
T ss_pred HHhCCCCCceEEEEEcccccccCHHHHHHHHHHHhh
Confidence 0001224689999999999999999999998853
No 23
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=99.38 E-value=9.7e-12 Score=115.80 Aligned_cols=209 Identities=15% Similarity=0.047 Sum_probs=122.2
Q ss_pred EEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccceeeccc
Q 022054 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (303)
Q Consensus 36 rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~~~~~~ 115 (303)
||+++++++ ..||+|+.+.+++++|.+.+ +++.+++.... + +....... ..+. ++..+..
T Consensus 1 kIl~~~~~~-~~GG~~~~~~~l~~~L~~~~--~~v~~i~~~~~-~-~~~~~~~~-~~~~------~~~~~~~-------- 60 (358)
T cd03812 1 KILHIVGTM-NRGGIETFIMNYYRNLDRSK--IQFDFLVTSKE-E-GDYDDEIE-KLGG------KIYYIPA-------- 60 (358)
T ss_pred CEEEEeCCC-CCccHHHHHHHHHHhcCccc--eEEEEEEeCCC-C-cchHHHHH-HcCC------eEEEecC--------
Confidence 689999999 78999999999999998654 56666665431 1 11111111 0111 1221110
Q ss_pred CCchhhhhHHHHHHHHHHHHHhccCCcEEEeCCCcccccce--eeccCCeE-EEEeecCCcchHHHhhhhccccccCchh
Q 022054 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPL--ARIFGCRV-ICYTHYPTISLDMISRVREGSSMYNNNA 192 (303)
Q Consensus 116 ~~~~~l~~~~l~~~~~~~~~l~~~~pDv~i~t~~~~~~~pl--a~~~~~~~-i~Y~H~P~~s~~~~~~~~~~~~~~~~~~ 192 (303)
.....++. +....+.+++.+||+++.........+. +...+.+. +...|....... .
T Consensus 61 --~~~~~~~~---~~~~~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~----------~----- 120 (358)
T cd03812 61 --RKKNPLKY---FKKLYKLIKKNKYDIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHD----------K----- 120 (358)
T ss_pred --CCccHHHH---HHHHHHHHhcCCCCEEEEeCcchhHHHHHHHhhCCCCeEEEEecccccccc----------c-----
Confidence 00011111 1223344667899988765443212221 11234444 445565431000 0
Q ss_pred hhhhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCC--------C
Q 022054 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL--------E 264 (303)
Q Consensus 193 ~~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~~~~~--------~ 264 (303)
.. +...+ .++.....+.+|.+++.|+..++.+.+... +.++.||||++|.+.+...+. .
T Consensus 121 -------~~--~~~~~---~~~~~~~~~~~~~~i~~s~~~~~~~~~~~~-~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~ 187 (358)
T cd03812 121 -------KK--KILKY---KVLRKLINRLATDYLACSEEAGKWLFGKVK-NKKFKVIPNGIDLEKFIFNEEIRKKRRELG 187 (358)
T ss_pred -------cc--hhhHH---HHHHHHHHhcCCEEEEcCHHHHHHHHhCCC-cccEEEEeccCcHHHcCCCchhhhHHHHcC
Confidence 00 00011 122344567899999999999999887632 478999999999877642110 0
Q ss_pred CCCCCCEEEEEcCcccccChHHHHHHHHHcccC
Q 022054 265 RSTEYPAIISVAQFRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 265 ~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~~ 297 (303)
.......++++||+.++||++.+++|++.+.++
T Consensus 188 ~~~~~~~i~~vGr~~~~Kg~~~li~a~~~l~~~ 220 (358)
T cd03812 188 ILEDKFVIGHVGRFSEQKNHEFLIEIFAELLKK 220 (358)
T ss_pred CCCCCEEEEEEeccccccChHHHHHHHHHHHHh
Confidence 112357899999999999999999999998754
No 24
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=99.34 E-value=3.9e-11 Score=110.05 Aligned_cols=208 Identities=20% Similarity=0.174 Sum_probs=124.2
Q ss_pred EEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccceeeccc
Q 022054 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (303)
Q Consensus 36 rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~~~~~~ 115 (303)
||+++++.++ .||+|+++.+++++|.+.+.++ .+++... .......+.. .++ .+..+.....
T Consensus 1 ~i~~i~~~~~-~gG~~~~~~~l~~~l~~~~~~v--~~~~~~~---~~~~~~~~~~-~~i------~v~~~~~~~~----- 62 (365)
T cd03807 1 KVLHVITGLD-VGGAERMLVRLLKGLDRDRFEH--VVISLTD---RGELGEELEE-AGV------PVYCLGKRPG----- 62 (365)
T ss_pred CeEEEEeecc-CccHHHHHHHHHHHhhhccceE--EEEecCc---chhhhHHHHh-cCC------eEEEEecccc-----
Confidence 6899999994 6999999999999998876554 4444322 1111111111 122 2333221110
Q ss_pred CCchhhhhHHHHHHHHHHHHHhccCCcEEEeCCCcccccc-e-eec-cCCeEEEEeecCCcchHHHhhhhccccccCchh
Q 022054 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-L-ARI-FGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (303)
Q Consensus 116 ~~~~~l~~~~l~~~~~~~~~l~~~~pDv~i~t~~~~~~~p-l-a~~-~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~ 192 (303)
... ...+....+.+++.+||+++.......... + +.. .+.+.+...|.-....
T Consensus 63 ~~~-------~~~~~~~~~~~~~~~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----------------- 118 (365)
T cd03807 63 RPD-------PGALLRLYKLIRRLRPDVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDL----------------- 118 (365)
T ss_pred ccc-------HHHHHHHHHHHHhhCCCEEEeccccccHHHHHHHHhcCCCcEEEEecCCcccc-----------------
Confidence 000 011222345567889998876543322222 1 122 4567777777644100
Q ss_pred hhhhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccCC--------
Q 022054 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPL-------- 263 (303)
Q Consensus 193 ~~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~-~~~~~VIYPPvd~~~~~~~~~-------- 263 (303)
..... ....++.+...+.+|.++++|+.+++.+.+. +. ..++.++|+++|.+.+.....
T Consensus 119 -------~~~~~----~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~-~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~ 186 (365)
T cd03807 119 -------GKKST----RLVARLRRLLSSFIPLIVANSAAAAEYHQAI-GYPPKKIVVIPNGVDTERFSPDLDARARLREE 186 (365)
T ss_pred -------cchhH----hHHHHHHHHhccccCeEEeccHHHHHHHHHc-CCChhheeEeCCCcCHHhcCCcccchHHHHHh
Confidence 00001 1112223445578999999999999999986 54 568899999999876642110
Q ss_pred -CCCCCCCEEEEEcCcccccChHHHHHHHHHcccC
Q 022054 264 -ERSTEYPAIISVAQFRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 264 -~~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~~ 297 (303)
.-......++++||+.++|+++.+++|+..+.++
T Consensus 187 ~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~ 221 (365)
T cd03807 187 LGLPEDTFLIGIVARLHPQKDHATLLRAAALLLKK 221 (365)
T ss_pred cCCCCCCeEEEEecccchhcCHHHHHHHHHHHHHh
Confidence 0012246889999999999999999999988654
No 25
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=99.33 E-value=6.8e-11 Score=109.08 Aligned_cols=191 Identities=14% Similarity=0.027 Sum_probs=118.1
Q ss_pred cEEEEEcCCC-----CCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccc
Q 022054 35 TSVAFFHPNT-----NDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRK 109 (303)
Q Consensus 35 ~rVa~~hp~l-----~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~ 109 (303)
|||+++-+++ ...||+|+++.+++++|.+.+ +++.+++...+..... . ..... ...
T Consensus 1 MkI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g--~~V~v~~~~~~~~~~~----~-----~~~~~--------~~~ 61 (335)
T cd03802 1 MRIALVAPPREPVPPPAYGGTERVVAALTEGLVARG--HEVTLFASGDSKTAAP----L-----VPVVP--------EPL 61 (335)
T ss_pred CeEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhcC--ceEEEEecCCCCcccc----e-----eeccC--------CCc
Confidence 6899988875 258999999999999999875 5566777543211100 0 00000 000
Q ss_pred eeecccCCchhhhhHHHHHHHHHHHHHhccCCcEEEeCCCcccccceeeccCCeEEEEeecCCcchHHHhhhhccccccC
Q 022054 110 WIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYN 189 (303)
Q Consensus 110 ~~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~pDv~i~t~~~~~~~pla~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~ 189 (303)
.... ....+..........+.+++.+||+++......... .+...+.|+++..|..... +
T Consensus 62 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~Divh~~~~~~~~~-~~~~~~~~~v~~~h~~~~~-------------~- 121 (335)
T cd03802 62 RLDA-----PGRDRAEAEALALAERALAAGDFDIVHNHSLHLPLP-FARPLPVPVVTTLHGPPDP-------------E- 121 (335)
T ss_pred cccc-----chhhHhhHHHHHHHHHHHhcCCCCEEEecCcccchh-hhcccCCCEEEEecCCCCc-------------c-
Confidence 0000 000011111122233446778899888654332221 2334578889888986610 0
Q ss_pred chhhhhhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCCCCCCCC
Q 022054 190 NNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEY 269 (303)
Q Consensus 190 ~~~~~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~~~~~~~~~~~ 269 (303)
. .. ........+.+++.|+..++..... .++.|||+++|++.+.. .. .++
T Consensus 122 ----------~---~~---------~~~~~~~~~~~~~~s~~~~~~~~~~----~~~~vi~ngvd~~~~~~--~~--~~~ 171 (335)
T cd03802 122 ----------L---LK---------LYYAARPDVPFVSISDAQRRPWPPL----PWVATVHNGIDLDDYPF--RG--PKG 171 (335)
T ss_pred ----------c---ch---------HHHhhCcCCeEEEecHHHHhhcccc----cccEEecCCcChhhCCC--CC--CCC
Confidence 0 00 1123366889999999998876553 48899999999988752 22 226
Q ss_pred CEEEEEcCcccccChHHHHHHHHHc
Q 022054 270 PAIISVAQFRPEKVRYKLISTRHIL 294 (303)
Q Consensus 270 ~~iLsvgRl~p~Kn~~llI~Afa~L 294 (303)
+.++++||+.++||++.+++|+++.
T Consensus 172 ~~i~~~Gr~~~~Kg~~~li~~~~~~ 196 (335)
T cd03802 172 DYLLFLGRISPEKGPHLAIRAARRA 196 (335)
T ss_pred CEEEEEEeeccccCHHHHHHHHHhc
Confidence 7999999999999999999998764
No 26
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=99.31 E-value=7.8e-11 Score=114.79 Aligned_cols=227 Identities=14% Similarity=0.041 Sum_probs=116.4
Q ss_pred CChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccceeecccCCchhhhhHHH
Q 022054 47 GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSF 126 (303)
Q Consensus 47 ~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~~~~~~~~~~~l~~~~l 126 (303)
.||+|+.+.+++++|.+.+.-+++.++|...+.. +........+ .+..+.+++..+..+ +..+......+..+
T Consensus 25 ~GG~~~~v~~La~~L~~~G~~~~V~v~t~~~~~~--~~~~~~~~~~-~~~~~gv~v~r~~~~----~~~~~~~~~~~~~~ 97 (439)
T TIGR02472 25 TGGQTKYVLELARALARRSEVEQVDLVTRLIKDA--KVSPDYAQPI-ERIAPGARIVRLPFG----PRRYLRKELLWPYL 97 (439)
T ss_pred CCCcchHHHHHHHHHHhCCCCcEEEEEeccccCc--CCCCccCCCe-eEeCCCcEEEEecCC----CCCCcChhhhhhhH
Confidence 4999999999999999986423667777532100 0000000000 111223334332211 00011111122222
Q ss_pred HHHH-HHHHHHhcc--CCcEEEeCCCcccccce--eeccCCeEEEEeecCCcchHHHhhhhccccccCchhhhhhchhhh
Q 022054 127 GSVY-LSWEALCKF--TPLYYFDTSGYAFTYPL--ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLS 201 (303)
Q Consensus 127 ~~~~-~~~~~l~~~--~pDv~i~t~~~~~~~pl--a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (303)
..+. ...+.+++. +|||++.....+..... ++..+.|++...|...... .+.... . .....
T Consensus 98 ~~~~~~l~~~~~~~~~~~DvIH~h~~~~~~~~~~~~~~~~~p~V~t~H~~~~~~--~~~~~~-----~-------~~~~~ 163 (439)
T TIGR02472 98 DELADNLLQHLRQQGHLPDLIHAHYADAGYVGARLSRLLGVPLIFTGHSLGREK--RRRLLA-----A-------GLKPQ 163 (439)
T ss_pred HHHHHHHHHHHHHcCCCCCEEEEcchhHHHHHHHHHHHhCCCEEEecccccchh--hhhccc-----C-------CCChh
Confidence 1111 122334433 69998865432222221 2245789999999643100 000000 0 00000
Q ss_pred HhHHHHHHHH-HHHHHHhccCCcEEEEcCHHHHHHHH-HHhCC-CCCceEEcCCCCCCcccccC-CC-------------
Q 022054 202 QCKIVYYTFF-SWMYGLVGSCADLAMVNSSWTQSHIE-KLWGI-PDRIKRVYPPCDTSGLQVLP-LE------------- 264 (303)
Q Consensus 202 ~~k~~y~~~~-~~l~~~~~~~ad~viaNS~~t~~~i~-~~~~~-~~~~~VIYPPvd~~~~~~~~-~~------------- 264 (303)
.....|.... ....++.++.+|.|+++|+...++.. +..+. ++++.||||.||++.|.... ..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~~~~~~~ 243 (439)
T TIGR02472 164 QIEKQYNISRRIEAEEETLAHASLVITSTHQEIEEQYALYDSYQPERMQVIPPGVDLSRFYPPQSSEETSEIDNLLAPFL 243 (439)
T ss_pred hhhhhcchHHHHHHHHHHHHhCCEEEECCHHHHHHHHHhccCCCccceEEECCCcChhhcCCCCccccchhHHHHHHhhc
Confidence 1111111000 01245567899999999976544433 33344 67899999999998875211 00
Q ss_pred CCCCCCEEEEEcCcccccChHHHHHHHHHc
Q 022054 265 RSTEYPAIISVAQFRPEKVRYKLISTRHIL 294 (303)
Q Consensus 265 ~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L 294 (303)
....+++++++||+.|+||++.+|+||+.+
T Consensus 244 ~~~~~~~i~~vGrl~~~Kg~~~li~A~~~l 273 (439)
T TIGR02472 244 KDPEKPPILAISRPDRRKNIPSLVEAYGRS 273 (439)
T ss_pred cccCCcEEEEEcCCcccCCHHHHHHHHHhC
Confidence 011246899999999999999999999865
No 27
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=99.31 E-value=2e-10 Score=104.71 Aligned_cols=217 Identities=18% Similarity=0.126 Sum_probs=129.0
Q ss_pred EEEEEcCCCCCC-ChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccceeecc
Q 022054 36 SVAFFHPNTNDG-GGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (303)
Q Consensus 36 rVa~~hp~l~~~-GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~~~~~ 114 (303)
||+++.+..... ||++.++.+++++|.+.+ +++.+++...+..... . ...... .... .
T Consensus 1 kI~ii~~~~~~~~~G~~~~~~~l~~~L~~~g--~~v~i~~~~~~~~~~~-----~---~~~~~~---~~~~--------~ 59 (374)
T cd03801 1 KILLVTPEYPPSVGGAERHVLELARALAARG--HEVTVLTPGDGGLPDE-----E---EVGGIV---VVRP--------P 59 (374)
T ss_pred CeeEEecccCCccCcHhHHHHHHHHHHHhcC--ceEEEEecCCCCCCce-----e---eecCcc---eecC--------C
Confidence 578888876555 999999999999999865 5556666543111100 0 000000 0000 0
Q ss_pred cCCchhhhhHHHHHHHHHHHHHhccCCcEEEeCCCcccccce--eeccCCeEEEEeecCCcchHHHhhhhccccccCchh
Q 022054 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPL--ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (303)
Q Consensus 115 ~~~~~~l~~~~l~~~~~~~~~l~~~~pDv~i~t~~~~~~~pl--a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~ 192 (303)
........+..........+.++..+||+++........... +...+.|.+..+|.... .. ...
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~-~~-----------~~~-- 125 (374)
T cd03801 60 PLLRVRRLLLLLLLALRLRRLLRRERFDVVHAHDWLALLAAALAARLLGIPLVLTVHGLEF-GR-----------PGN-- 125 (374)
T ss_pred cccccchhHHHHHHHHHHHHHhhhcCCcEEEEechhHHHHHHHHHHhcCCcEEEEeccchh-hc-----------ccc--
Confidence 000000111111112223344667789987765544322221 22457899999998651 00 000
Q ss_pred hhhhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccc------cCCCC
Q 022054 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQV------LPLER 265 (303)
Q Consensus 193 ~~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~-~~~~~VIYPPvd~~~~~~------~~~~~ 265 (303)
. ................+.+|.+++.|+.+++.+.+.++. ..++.++++|++.+.+.. .....
T Consensus 126 -------~---~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 195 (374)
T cd03801 126 -------E---LGLLLKLARALERRALRRADRIIAVSEATREELRELGGVPPEKITVIPNGVDTERFRPAPRAARRRLGI 195 (374)
T ss_pred -------c---hhHHHHHHHHHHHHHHHhCCEEEEecHHHHHHHHhcCCCCCCcEEEecCcccccccCccchHHHhhcCC
Confidence 0 011112222234455688999999999999999999985 358999999999887641 11111
Q ss_pred CCCCCEEEEEcCcccccChHHHHHHHHHcccC
Q 022054 266 STEYPAIISVAQFRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 266 ~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~~ 297 (303)
..+...++++||+.++|+++.+++|+..+.++
T Consensus 196 ~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~ 227 (374)
T cd03801 196 PEDEPVILFVGRLVPRKGVDLLLEALAKLRKE 227 (374)
T ss_pred cCCCeEEEEecchhhhcCHHHHHHHHHHHhhh
Confidence 22257899999999999999999999998764
No 28
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.30 E-value=2.2e-10 Score=106.30 Aligned_cols=208 Identities=12% Similarity=0.009 Sum_probs=119.5
Q ss_pred EEEEEcCCCCC-CChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccceeecc
Q 022054 36 SVAFFHPNTND-GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (303)
Q Consensus 36 rVa~~hp~l~~-~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~~~~~ 114 (303)
||..+.++... .||+|+++.+++++|.+.+.++ .+++...+..... ... .+. .+..+.. .....
T Consensus 1 kil~i~~~~~p~~gG~~~~~~~l~~~L~~~g~~v--~v~~~~~~~~~~~--~~~---~~~------~~~~~~~--~~~~~ 65 (357)
T cd03795 1 RVLHVGKFYPPDRGGIEQVIRDLAEGLAARGIEV--AVLCASPEPKGRD--EER---NGH------RVIRAPS--LLNVA 65 (357)
T ss_pred CeeEecCCCCCCCCcHHHHHHHHHHHHHhCCCce--EEEecCCCCcchh--hhc---cCc------eEEEeec--ccccc
Confidence 35555555433 7999999999999999986554 5555432111100 000 011 1111111 00000
Q ss_pred cCCchhhhhHHHHHHHHHHHHHhccCCcEEEeCCCcccccceee--ccCCeEEEEeecCCcchHHHhhhhccccccCchh
Q 022054 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLAR--IFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (303)
Q Consensus 115 ~~~~~~l~~~~l~~~~~~~~~l~~~~pDv~i~t~~~~~~~pla~--~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~ 192 (303)
..+. .. .+...++ ++..+||+++............. ..+.|.+...|......
T Consensus 66 ~~~~---~~----~~~~~~~-~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~----------------- 120 (357)
T cd03795 66 STPF---SP----SFFKQLK-KLAKKADVIHLHFPNPLADLALLLLPRKKPVVVHWHSDIVKQ----------------- 120 (357)
T ss_pred cccc---cH----HHHHHHH-hcCCCCCEEEEecCcchHHHHHHHhccCceEEEEEcChhhcc-----------------
Confidence 0000 00 0111111 45678997764433221111111 23677888888643100
Q ss_pred hhhhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCC------CCC
Q 022054 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL------ERS 266 (303)
Q Consensus 193 ~~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~~~~~------~~~ 266 (303)
. .....+.++.++..+.+|.+++.|+.+++.+...++.+.++.+++|++|.+.+..... ...
T Consensus 121 --------~----~~~~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~~~~~~~~~~~i~~gi~~~~~~~~~~~~~~~~~~~ 188 (357)
T cd03795 121 --------K----LLLKLYRPLQRRFLRRADAIVATSPNYAETSPVLRRFRDKVRVIPLGLDPARYPRPDALEEAIWRRA 188 (357)
T ss_pred --------c----hhhhhhhHHHHHHHHhcCEEEeCcHHHHHHHHHhcCCccceEEecCCCChhhcCCcchhhhHhhcCC
Confidence 0 0112222334556688999999999999999887654468899999999887653211 111
Q ss_pred CCCCEEEEEcCcccccChHHHHHHHHHcc
Q 022054 267 TEYPAIISVAQFRPEKVRYKLISTRHILF 295 (303)
Q Consensus 267 ~~~~~iLsvgRl~p~Kn~~llI~Afa~L~ 295 (303)
..++.++++||+.++||++.+++|++++.
T Consensus 189 ~~~~~i~~~G~~~~~K~~~~li~a~~~l~ 217 (357)
T cd03795 189 AGRPFFLFVGRLVYYKGLDVLLEAAAALP 217 (357)
T ss_pred CCCcEEEEecccccccCHHHHHHHHHhcc
Confidence 23578999999999999999999999986
No 29
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=99.30 E-value=1e-10 Score=108.66 Aligned_cols=203 Identities=14% Similarity=0.110 Sum_probs=121.0
Q ss_pred EEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccceeeccc
Q 022054 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (303)
Q Consensus 36 rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~~~~~~ 115 (303)
+|.++++.+ +.||+|+++.+++++|.+.+.++ .+++...+... +.... .. ....+... .
T Consensus 1 ~il~~~~~~-~~gG~~~~~~~l~~~L~~~g~~v--~v~~~~~~~~~-~~~~~-----~~------~~~~~~~~----~-- 59 (360)
T cd04951 1 KILYVITGL-GLGGAEKQVVDLADQFVAKGHQV--AIISLTGESEV-KPPID-----AT------IILNLNMS----K-- 59 (360)
T ss_pred CeEEEecCC-CCCCHHHHHHHHHHhcccCCceE--EEEEEeCCCCc-cchhh-----cc------ceEEeccc----c--
Confidence 478888888 57999999999999998876554 55553321110 00000 00 01011100 0
Q ss_pred CCchhhhhHHHHHHHHHHHHHhccCCcEEEeCCCcccccc-ee-e-ccCCeEEEEeecCCcchHHHhhhhccccccCchh
Q 022054 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-LA-R-IFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (303)
Q Consensus 116 ~~~~~l~~~~l~~~~~~~~~l~~~~pDv~i~t~~~~~~~p-la-~-~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~ 192 (303)
..... +.......+.+++.+||+++....++.... +. + ..+.+.+..+|....
T Consensus 60 -~~~~~----~~~~~~~~~~~~~~~pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~------------------- 115 (360)
T cd04951 60 -NPLSF----LLALWKLRKILRQFKPDVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNE------------------- 115 (360)
T ss_pred -cchhh----HHHHHHHHHHHHhcCCCEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCc-------------------
Confidence 00111 111222344567789998776543322222 11 1 235677877886430
Q ss_pred hhhhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccC---------
Q 022054 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLP--------- 262 (303)
Q Consensus 193 ~~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~-~~~~~VIYPPvd~~~~~~~~--------- 262 (303)
.+..+. +.++.....++.+++.|...++.+.+..+. ++++.+++|++|.+.+....
T Consensus 116 -------~~~~~~-------~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~i~ng~~~~~~~~~~~~~~~~~~~ 181 (360)
T cd04951 116 -------GGRLRM-------LAYRLTDFLSDLTTNVSKEALDYFIASKAFNANKSFVVYNGIDTDRFRKDPARRLKIRNA 181 (360)
T ss_pred -------hhHHHH-------HHHHHHhhccCceEEEcHHHHHHHHhccCCCcccEEEEccccchhhcCcchHHHHHHHHH
Confidence 001111 123333456788999999999999988655 57899999999987764211
Q ss_pred CCCCCCCCEEEEEcCcccccChHHHHHHHHHcccC
Q 022054 263 LERSTEYPAIISVAQFRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 263 ~~~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~~ 297 (303)
+........++++||+.++|+++.+|+|++.+.++
T Consensus 182 ~~~~~~~~~~l~~g~~~~~kg~~~li~a~~~l~~~ 216 (360)
T cd04951 182 LGVKNDTFVILAVGRLVEAKDYPNLLKAFAKLLSD 216 (360)
T ss_pred cCcCCCCEEEEEEeeCchhcCcHHHHHHHHHHHhh
Confidence 00112246899999999999999999999988754
No 30
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.30 E-value=2.7e-12 Score=124.64 Aligned_cols=232 Identities=20% Similarity=0.227 Sum_probs=143.5
Q ss_pred CCCcEEEEEcCCCCCCChHHHHHHHHHHHHHH---------hCCCCeEEEEeccCCCChhHHHH-hhhhccCccccCCCe
Q 022054 32 NRTTSVAFFHPNTNDGGGGERVLWCAVKAIQE---------ESPDLDCIVYTGDHDAFPDSLLA-RAVDRFGVELLHPPK 101 (303)
Q Consensus 32 ~~~~rVa~~hp~l~~~GGaErv~~~la~aL~~---------~~~~~~~~v~t~~~~~~~~~~~~-~~~~~~~~~l~~~~~ 101 (303)
....++++.||++ .+||+||..++.+.+++. .+ .+++++|.+.+....+++- ......+.. .++.
T Consensus 32 ~~~~~~~~~~~~~-~~gg~er~~v~~~~~l~s~~~~lg~~d~G--~qV~~l~~h~~al~~~~~~~~~~~~l~~~--~~i~ 106 (495)
T KOG0853|consen 32 KPFEHVTFIHPDL-GIGGAERLVVDAAVHLLSGQDVLGLPDTG--GQVVYLTSHEDALEMPLLLRCFAETLDGT--PPIL 106 (495)
T ss_pred ccchhheeecccc-ccCchHHHhHHHHHHHHhcccccCCCCCC--ceEEEEehhhhhhcchHHHHHHHHHhcCC--CceE
Confidence 3456799999999 689999999999999988 65 5567777665322111111 111111211 1111
Q ss_pred EEEccccceeeccc--CCchhhhhHHHHH--HHH--HHHHHhccCCcEEE-eCCCccccccee-ecc----CCeEEEEee
Q 022054 102 VVHLYRRKWIEEST--YPRFTMIGQSFGS--VYL--SWEALCKFTPLYYF-DTSGYAFTYPLA-RIF----GCRVICYTH 169 (303)
Q Consensus 102 ~i~L~~~~~~~~~~--~~~~~l~~~~l~~--~~~--~~~~l~~~~pDv~i-~t~~~~~~~pla-~~~----~~~~i~Y~H 169 (303)
++ +.++++.. +.......+.... .++ +.+.. .+.|+++ ++. ..+.|+. .+. .+.+.+|||
T Consensus 107 vv----~~~lP~~~~~~~~~~~~~~~~~il~~~~~~~~k~~--~~~d~~i~d~~--~~~~~l~~~~~~p~~~~~i~~~~h 178 (495)
T KOG0853|consen 107 VV----GDWLPRAMGQFLEQVAGCAYLRILRIPFGILFKWA--EKVDPIIEDFV--SACVPLLKQLSGPDVIIKIYFYCH 178 (495)
T ss_pred EE----EeecCcccchhhhhhhccceeEEEEeccchhhhhh--hhhceeecchH--HHHHHHHHHhcCCcccceeEEecc
Confidence 11 22443332 1111111111110 000 11111 4467444 443 2445553 233 477899999
Q ss_pred cCCcchHHHhhhhccccccCchhhhhhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC--CCCce
Q 022054 170 YPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI--PDRIK 247 (303)
Q Consensus 170 ~P~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~--~~~~~ 247 (303)
+|+ +.+.++ .+..+.+|...+.+........+|.+++||.+|+.+++..+-. ..++.
T Consensus 179 ~~~------~lla~r---------------~g~~~~l~~~~l~~~e~e~~~~~~~~~~ns~~~~~~f~~~~~~L~~~d~~ 237 (495)
T KOG0853|consen 179 FPD------SLLAKR---------------LGVLKVLYRHALDKIEEETTGLAWKILVNSYFTKRQFKATFVSLSNSDIT 237 (495)
T ss_pred chH------HHhccc---------------cCccceeehhhhhhhhhhhhhccceEecchhhhhhhhhhhhhhcCCCCcc
Confidence 998 333221 2345678888888888888889999999999999999999864 45699
Q ss_pred EEcCCCCCCcccc------c----CCC-C---CCCCCEEEEEcCcccccChHHHHHHHHHcccC
Q 022054 248 RVYPPCDTSGLQV------L----PLE-R---STEYPAIISVAQFRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 248 VIYPPvd~~~~~~------~----~~~-~---~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~~ 297 (303)
+.||.||.+.+.. . +.. . ...+-++.+++|++|.||++++++||.++.+.
T Consensus 238 ~~y~ei~~s~~~~~~~~~~~~~~~~~r~~~~v~~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~ 301 (495)
T KOG0853|consen 238 STYPEIDGSWFTYGQYESHLELRLPVRLYRGVSGIDRFFPSINRFEPGKDQDLALPAFTLLHDS 301 (495)
T ss_pred eeeccccchhccccccccchhcccccceeeeecccceEeeeeeecCCCCCceeehhhHHhhhcc
Confidence 9999999776541 0 110 0 11246788999999999999999999998765
No 31
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=99.28 E-value=2e-10 Score=106.53 Aligned_cols=203 Identities=14% Similarity=0.075 Sum_probs=124.0
Q ss_pred EEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccceeeccc
Q 022054 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (303)
Q Consensus 36 rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~~~~~~ 115 (303)
||+++.+.+ .+|+|+.+++++++|.+.+ +++.+++....... . ..... ..... .. ...
T Consensus 1 ki~~~~~~~--~~~~~~~~~~~~~~L~~~g--~~v~v~~~~~~~~~-~----~~~~~-~~~~~-----~~---~~~---- 58 (355)
T cd03799 1 KIAYLVKEF--PRLSETFILREILALEAAG--HEVEIFSLRPPEDT-L----VHPED-RAELA-----RT---RYL---- 58 (355)
T ss_pred CEEEECCCC--CCcchHHHHHHHHHHHhCC--CeEEEEEecCcccc-c----ccccc-ccccc-----ch---HHH----
Confidence 589999998 4569999999999998875 45566665431110 0 00000 00000 00 000
Q ss_pred CCchhhhhHHHHHHHHHHHHHhccCCcEEEeCCCcccccc--e-eeccCCeEEEEeecCCcchHHHhhhhccccccCchh
Q 022054 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--L-ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (303)
Q Consensus 116 ~~~~~l~~~~l~~~~~~~~~l~~~~pDv~i~t~~~~~~~p--l-a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~ 192 (303)
...+..+.......+.+++.++|+++...+...... + +...+.+.+..+|.+... ..
T Consensus 59 ----~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~-- 118 (355)
T cd03799 59 ----ARSLALLAQALVLARELRRLGIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIF--------------RS-- 118 (355)
T ss_pred ----HHHHHHHHHHHHHHHHHHhcCCCEEEECCCCchHHHHHHHHHhcCCCEEEEEeccccc--------------cc--
Confidence 001111112222334456688998886543221111 1 123467888888876510 00
Q ss_pred hhhhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccCCCCCCCCCE
Q 022054 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLERSTEYPA 271 (303)
Q Consensus 193 ~~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~-~~~~~VIYPPvd~~~~~~~~~~~~~~~~~ 271 (303)
.. . ..++...+.+|.++++|++.++.+++.++. ..++.|++|++|.+.+..........+..
T Consensus 119 -------~~--~--------~~~~~~~~~~~~vi~~s~~~~~~l~~~~~~~~~~~~vi~~~~d~~~~~~~~~~~~~~~~~ 181 (355)
T cd03799 119 -------PD--A--------IDLDEKLARADFVVAISEYNRQQLIRLLGCDPDKIHVVHCGVDLERFPPRPPPPPGEPLR 181 (355)
T ss_pred -------Cc--h--------HHHHHHHhhCCEEEECCHHHHHHHHHhcCCCcccEEEEeCCcCHHHcCCccccccCCCeE
Confidence 00 0 123444578999999999999999998765 67899999999988775322011122568
Q ss_pred EEEEcCcccccChHHHHHHHHHcccC
Q 022054 272 IISVAQFRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 272 iLsvgRl~p~Kn~~llI~Afa~L~~~ 297 (303)
++++||+.++||++.+++|++.+.++
T Consensus 182 i~~~g~~~~~k~~~~l~~~~~~l~~~ 207 (355)
T cd03799 182 ILSVGRLVEKKGLDYLLEALALLKDR 207 (355)
T ss_pred EEEEeeeccccCHHHHHHHHHHHhhc
Confidence 99999999999999999999998764
No 32
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=99.27 E-value=1.9e-10 Score=106.52 Aligned_cols=199 Identities=16% Similarity=0.044 Sum_probs=116.5
Q ss_pred EEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccceeeccc
Q 022054 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (303)
Q Consensus 36 rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~~~~~~ 115 (303)
||+|+.++....||+|+++.+++++|.+.++++ .+++...+... . ......+...... .
T Consensus 1 kI~~v~~~~~~~gG~~~~~~~l~~~L~~~g~~v--~v~~~~~~~~~--~-------~~~~~~~~~~~~~--------~-- 59 (366)
T cd03822 1 RIALVSPYPPRKCGIATFTTDLVNALSARGPDV--LVVSVAALYPS--L-------LYGGEQEVVRVIV--------L-- 59 (366)
T ss_pred CeEEecCCCCCCCcHHHHHHHHHHHhhhcCCeE--EEEEeecccCc--c-------cCCCcccceeeee--------c--
Confidence 689999998668999999999999999986554 45443321110 0 0000000000000 0
Q ss_pred CCchhhhhHHHHHHHHHHHHHhccCCcEEEeCCCcccccce----ee----ccCCeEEEEeecCCcchHHHhhhhccccc
Q 022054 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPL----AR----IFGCRVICYTHYPTISLDMISRVREGSSM 187 (303)
Q Consensus 116 ~~~~~l~~~~l~~~~~~~~~l~~~~pDv~i~t~~~~~~~pl----a~----~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~ 187 (303)
.... ......+.++..+||+++.+.......|. .. ..+.|+++.+|...... .
T Consensus 60 ~~~~--------~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~---~-------- 120 (366)
T cd03822 60 DNPL--------DYRRAARAIRLSGPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHE---P-------- 120 (366)
T ss_pred CCch--------hHHHHHHHHhhcCCCEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCccc---c--------
Confidence 0000 11123344677899987755422111121 11 15789999999862000 0
Q ss_pred cCchhhhhhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC--CCCceEEcCCCCCCcccccCC--
Q 022054 188 YNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI--PDRIKRVYPPCDTSGLQVLPL-- 263 (303)
Q Consensus 188 ~~~~~~~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~--~~~~~VIYPPvd~~~~~~~~~-- 263 (303)
. . .+ .++.+...+.+|.+++.|+ +..++.+.. +.++.|+++|++...+.....
T Consensus 121 ------------~-~---~~----~~~~~~~~~~~d~ii~~s~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 177 (366)
T cd03822 121 ------------R-P---GD----RALLRLLLRRADAVIVMSS---ELLRALLLRAYPEKIAVIPHGVPDPPAEPPESLK 177 (366)
T ss_pred ------------c-h---hh----hHHHHHHHhcCCEEEEeeH---HHHHHHHhhcCCCcEEEeCCCCcCcccCCchhhH
Confidence 0 0 00 1113344578999999983 333333332 368999999998776653210
Q ss_pred --CCCCCCCEEEEEcCcccccChHHHHHHHHHcccC
Q 022054 264 --ERSTEYPAIISVAQFRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 264 --~~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~~ 297 (303)
....+...++++||+.++|+++.+++|++.+.++
T Consensus 178 ~~~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~~~~~ 213 (366)
T cd03822 178 ALGGLDGRPVLLTFGLLRPYKGLELLLEALPLLVAK 213 (366)
T ss_pred hhcCCCCCeEEEEEeeccCCCCHHHHHHHHHHHHhh
Confidence 0122357899999999999999999999998765
No 33
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.26 E-value=9e-11 Score=109.95 Aligned_cols=136 Identities=17% Similarity=0.205 Sum_probs=91.4
Q ss_pred HHhccCCcEEEeCCCcccccce---eeccCCeEEEEeecCCcchHHHhhhhccccccCchhhhhhchhhhHhHHHHHHHH
Q 022054 135 ALCKFTPLYYFDTSGYAFTYPL---ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFF 211 (303)
Q Consensus 135 ~l~~~~pDv~i~t~~~~~~~pl---a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~ 211 (303)
.+++.+||+++...+.. ..+. ++..+.|++++.|..+..... .. ....+ ++.+
T Consensus 77 ~~~~~~~dvvh~~~~~~-~~~~~~~~~~~~~p~i~~~h~~~~~~~~-~~-------------------~~~~~---~~~~ 132 (367)
T cd05844 77 LLRRHRPDLVHAHFGFD-GVYALPLARRLGVPLVVTFHGFDATTSL-AL-------------------LLRSR---WALY 132 (367)
T ss_pred HHHhhCCCEEEeccCch-HHHHHHHHHHcCCCEEEEEeCccccccc-hh-------------------hcccc---hhHH
Confidence 36678999988654432 2221 234578999999964411000 00 00000 1222
Q ss_pred HHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccCCCCCCCCCEEEEEcCcccccChHHHHHH
Q 022054 212 SWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKVRYKLIST 290 (303)
Q Consensus 212 ~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~-~~~~~VIYPPvd~~~~~~~~~~~~~~~~~iLsvgRl~p~Kn~~llI~A 290 (303)
...++..++.+|.++++|+++++.+.+. |. +.++.|+++++|.+.+... .....+..++++||+.++||++.+++|
T Consensus 133 ~~~~~~~~~~~d~ii~~s~~~~~~~~~~-~~~~~~i~vi~~g~d~~~~~~~--~~~~~~~~i~~~G~~~~~K~~~~li~a 209 (367)
T cd05844 133 ARRRRRLARRAALFIAVSQFIRDRLLAL-GFPPEKVHVHPIGVDTAKFTPA--TPARRPPRILFVGRFVEKKGPLLLLEA 209 (367)
T ss_pred HHHHHHHHHhcCEEEECCHHHHHHHHHc-CCCHHHeEEecCCCCHHhcCCC--CCCCCCcEEEEEEeeccccChHHHHHH
Confidence 3335556688999999999999999986 54 5678999999998777522 112225789999999999999999999
Q ss_pred HHHcccC
Q 022054 291 RHILFNL 297 (303)
Q Consensus 291 fa~L~~~ 297 (303)
++.+.++
T Consensus 210 ~~~l~~~ 216 (367)
T cd05844 210 FARLARR 216 (367)
T ss_pred HHHHHHh
Confidence 9998654
No 34
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=99.26 E-value=2.3e-10 Score=108.13 Aligned_cols=83 Identities=24% Similarity=0.291 Sum_probs=65.9
Q ss_pred HHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccCC--------CCCCCCCEEEEEcCcccccChH
Q 022054 215 YGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPL--------ERSTEYPAIISVAQFRPEKVRY 285 (303)
Q Consensus 215 ~~~~~~~ad~viaNS~~t~~~i~~~~~~-~~~~~VIYPPvd~~~~~~~~~--------~~~~~~~~iLsvgRl~p~Kn~~ 285 (303)
.+...+.+|.++++|+..++.+.+.++. ..++.+|+|++|.+.+..... .......+++++||+.++||++
T Consensus 157 ~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~vi~ng~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gr~~~~k~~~ 236 (398)
T cd03800 157 EERLLRAADRVIASTPQEAEELYSLYGAYPRRIRVVPPGVDLERFTPYGRAEARRARLLRDPDKPRILAVGRLDPRKGID 236 (398)
T ss_pred HHHHHhhCCEEEEcCHHHHHHHHHHccccccccEEECCCCCccceecccchhhHHHhhccCCCCcEEEEEcccccccCHH
Confidence 4456688999999999999999998875 456899999999877652110 1112257899999999999999
Q ss_pred HHHHHHHHcccC
Q 022054 286 KLISTRHILFNL 297 (303)
Q Consensus 286 llI~Afa~L~~~ 297 (303)
.+++|+..+.++
T Consensus 237 ~ll~a~~~l~~~ 248 (398)
T cd03800 237 TLIRAYAELPEL 248 (398)
T ss_pred HHHHHHHHHHHh
Confidence 999999998754
No 35
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.22 E-value=5.1e-10 Score=102.96 Aligned_cols=74 Identities=12% Similarity=-0.016 Sum_probs=59.6
Q ss_pred cEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCCCCCCCCCEEEEEcCcccccChHHHHHHHHHccc
Q 022054 223 DLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKVRYKLISTRHILFN 296 (303)
Q Consensus 223 d~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~~~~~~~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~ 296 (303)
|.++++|+++++.+.+....+.++.|++|++|.+.+..........+..++++||+.++|+++.+++|++.+.+
T Consensus 145 d~ii~~s~~~~~~~~~~~~~~~~~~vi~n~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~ 218 (359)
T cd03823 145 DAVIAPSRFLLDRYVANGLFAEKISVIRNGIDLDRAKRPRRAPPGGRLRFGFIGQLTPHKGVDLLLEAFKRLPR 218 (359)
T ss_pred CEEEEeCHHHHHHHHHcCCCccceEEecCCcChhhccccccCCCCCceEEEEEecCccccCHHHHHHHHHHHHh
Confidence 99999999999999887543468999999999887753211012225688999999999999999999999875
No 36
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=99.22 E-value=5.6e-10 Score=103.09 Aligned_cols=233 Identities=12% Similarity=0.068 Sum_probs=124.4
Q ss_pred EEEEEcCCCC-CCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccceeecc
Q 022054 36 SVAFFHPNTN-DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (303)
Q Consensus 36 rVa~~hp~l~-~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~~~~~ 114 (303)
||.|+-+... ..||+++.+.+++++|.+.+. ++.+++......... ....+.....+.+++..+........
T Consensus 1 kIl~i~~~~~~~~~G~~~~~~~l~~~L~~~g~--~v~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~- 73 (394)
T cd03794 1 KILILSQYFPPELGGGAFRTTELAEELVKRGH--EVTVITGSPNYPSGK----IYKGYKREEVDGVRVHRVPLPPYKKN- 73 (394)
T ss_pred CEEEEecccCCccCCcceeHHHHHHHHHhCCc--eEEEEecCCCccccc----ccccceEEecCCeEEEEEecCCCCcc-
Confidence 4666666552 338999999999999998754 455665432111100 00000001112222222211100000
Q ss_pred cCCchhhhhHHHHHHHHHHHHH--hccCCcEEEeCC-Cccccccee---eccCCeEEEEeecCCcchHHHhhhhcccccc
Q 022054 115 TYPRFTMIGQSFGSVYLSWEAL--CKFTPLYYFDTS-GYAFTYPLA---RIFGCRVICYTHYPTISLDMISRVREGSSMY 188 (303)
Q Consensus 115 ~~~~~~l~~~~l~~~~~~~~~l--~~~~pDv~i~t~-~~~~~~pla---~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~ 188 (303)
..+......+.........+ +..+||+++... ......+.. ...+.|.+.++|... ........
T Consensus 74 --~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~-~~~~~~~~------- 143 (394)
T cd03794 74 --GLLKRLLNYLSFALSALLALLKRRRRPDVIIATSPPLLIALAALLLARLKGAPFVLEVRDLW-PESAVALG------- 143 (394)
T ss_pred --chHHHHHhhhHHHHHHHHHHHhcccCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhc-chhHHHcc-------
Confidence 00000111111111122223 367899777553 211112211 124688999999643 11110000
Q ss_pred CchhhhhhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccCC----
Q 022054 189 NNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPL---- 263 (303)
Q Consensus 189 ~~~~~~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~-~~~~~VIYPPvd~~~~~~~~~---- 263 (303)
... . .....+....+.+...+.+|.+++.|+..++.+. .++. ..++.|++++++.+.+.....
T Consensus 144 ----~~~----~---~~~~~~~~~~~~~~~~~~~d~vi~~s~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 211 (394)
T cd03794 144 ----LLK----N---GSLLYRLLRKLERLIYRRADAIVVISPGMREYLV-RRGVPPEKISVIPNGVDLELFKPPPADESL 211 (394)
T ss_pred ----Ccc----c---cchHHHHHHHHHHHHHhcCCEEEEECHHHHHHHH-hcCCCcCceEEcCCCCCHHHcCCccchhhh
Confidence 000 0 0111123333455667899999999999999998 4454 578999999998776643210
Q ss_pred ---CCCCCCCEEEEEcCcccccChHHHHHHHHHcccC
Q 022054 264 ---ERSTEYPAIISVAQFRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 264 ---~~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~~ 297 (303)
....+...++++||+.++|+++.+++|++.+.+.
T Consensus 212 ~~~~~~~~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~ 248 (394)
T cd03794 212 RKELGLDDKFVVLYAGNIGRAQGLDTLLEAAALLKDR 248 (394)
T ss_pred hhccCCCCcEEEEEecCcccccCHHHHHHHHHHHhhc
Confidence 1112256899999999999999999999998764
No 37
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=99.22 E-value=3.9e-10 Score=109.15 Aligned_cols=223 Identities=9% Similarity=0.029 Sum_probs=119.2
Q ss_pred CCcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccceee
Q 022054 33 RTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIE 112 (303)
Q Consensus 33 ~~~rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~~~ 112 (303)
+++||+++-- ..+|++.|+ .+++++|++.+++ +.+++..+.....+ .. ....++++.+.....
T Consensus 2 ~~~~~~~~~~--~~~~~~~R~-~~~a~~L~~~G~~--V~ii~~~~~~~~~~----~~------~~~~v~~~~~~~~~~-- 64 (415)
T cd03816 2 KRKRVCVLVL--GDIGRSPRM-QYHALSLAKHGWK--VDLVGYLETPPHDE----IL------SNPNITIHPLPPPPQ-- 64 (415)
T ss_pred CccEEEEEEe--cccCCCHHH-HHHHHHHHhcCce--EEEEEecCCCCCHH----Hh------cCCCEEEEECCCCcc--
Confidence 4567777763 234555565 6799999998654 55666443111111 00 112233444332110
Q ss_pred cccCCchhhhh---HHHHHHHHHHH-HHhccCCcEEEeCCCcccccc-e----eeccCCeEEEEeecCCcchHHHhhhhc
Q 022054 113 ESTYPRFTMIG---QSFGSVYLSWE-ALCKFTPLYYFDTSGYAFTYP-L----ARIFGCRVICYTHYPTISLDMISRVRE 183 (303)
Q Consensus 113 ~~~~~~~~l~~---~~l~~~~~~~~-~l~~~~pDv~i~t~~~~~~~p-l----a~~~~~~~i~Y~H~P~~s~~~~~~~~~ 183 (303)
.......++. ..+.......+ .++..+||+++.+..+..... + ++..+.|.+..+|.-..+. + . .
T Consensus 65 -~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h~~~~~~-~-~-~-- 138 (415)
T cd03816 65 -RLNKLPFLLFAPLKVLWQFFSLLWLLYKLRPADYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWHNYGYTI-L-A-L-- 138 (415)
T ss_pred -ccccchHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcCCchHHH-H-h-c--
Confidence 0000011111 11111111222 245568998886543322111 1 1245789998888632110 0 0 0
Q ss_pred cccccCchhhhhhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccC
Q 022054 184 GSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLP 262 (303)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~-~~~~~VIYPPvd~~~~~~~~ 262 (303)
.+. . .+. ..+++.++.++.++.+|.||++|+.+++.+.+ +|. ++++.||||.+ .+.+...+
T Consensus 139 ---~~~------~---~~~----~~~~~~~~e~~~~~~ad~ii~vS~~~~~~l~~-~~~~~~ki~vI~Ng~-~~~f~p~~ 200 (415)
T cd03816 139 ---KLG------E---NHP----LVRLAKWYEKLFGRLADYNLCVTKAMKEDLQQ-FNNWKIRATVLYDRP-PEQFRPLP 200 (415)
T ss_pred ---ccC------C---CCH----HHHHHHHHHHHHhhcCCEeeecCHHHHHHHHh-hhccCCCeeecCCCC-HHHceeCc
Confidence 000 0 011 12344445566678899999999999999998 666 78999999853 23322100
Q ss_pred -------C------------------CCCCCCCEEEEEcCcccccChHHHHHHHHHccc
Q 022054 263 -------L------------------ERSTEYPAIISVAQFRPEKVRYKLISTRHILFN 296 (303)
Q Consensus 263 -------~------------------~~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~ 296 (303)
. .......+++++||+.++||++.+|+|++.+++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~grl~~~K~~~~li~A~~~l~~ 259 (415)
T cd03816 201 LEEKHELFLKLAKTFLTRELRIGAVQLSEERPALLVSSTSWTPDEDFGILLDALVAYEK 259 (415)
T ss_pred HHHHHHHHHhccccccccccccccceecCCCceEEEEeccccCCCCHHHHHHHHHHHHH
Confidence 0 001113467799999999999999999999864
No 38
>PRK00654 glgA glycogen synthase; Provisional
Probab=99.22 E-value=3.5e-10 Score=111.10 Aligned_cols=82 Identities=11% Similarity=-0.012 Sum_probs=62.6
Q ss_pred HHhccCCcEEEEcCHHHHHHHHHH-h--------CC-CCCceEEcCCCCCCcccccCC----------------------
Q 022054 216 GLVGSCADLAMVNSSWTQSHIEKL-W--------GI-PDRIKRVYPPCDTSGLQVLPL---------------------- 263 (303)
Q Consensus 216 ~~~~~~ad~viaNS~~t~~~i~~~-~--------~~-~~~~~VIYPPvd~~~~~~~~~---------------------- 263 (303)
+.++..+|.|+++|+..++++.+. + +. +.++.||+|.||++.+.....
T Consensus 192 ~~~~~~ad~vitvS~~~~~ei~~~~~~~gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l 271 (466)
T PRK00654 192 KAGLYYADRVTTVSPTYAREITTPEFGYGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAENKRAL 271 (466)
T ss_pred HHHHHhcCcCeeeCHHHHHHhccccCCcChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhhhchHHHHHHH
Confidence 445688999999999999999762 2 22 468999999999987642100
Q ss_pred ----C-CCCCCCEEEEEcCcccccChHHHHHHHHHcccC
Q 022054 264 ----E-RSTEYPAIISVAQFRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 264 ----~-~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~~ 297 (303)
. .....+.++++||+.++|+++++|+|++++.++
T Consensus 272 ~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~ 310 (466)
T PRK00654 272 QERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQ 310 (466)
T ss_pred HHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhc
Confidence 0 001247899999999999999999999998654
No 39
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.19 E-value=2.7e-09 Score=97.42 Aligned_cols=211 Identities=16% Similarity=0.116 Sum_probs=117.4
Q ss_pred EEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccceeeccc
Q 022054 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (303)
Q Consensus 36 rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~~~~~~ 115 (303)
+|.++.+. .||+++.+.+++++|.+.+ +++.+++...+... .. ...++ ++..+.....
T Consensus 1 kIl~i~~~---~~g~~~~~~~l~~~L~~~g--~~v~~~~~~~~~~~-----~~-~~~~~------~~~~~~~~~~----- 58 (359)
T cd03808 1 KILHIVTV---DGGLYSFRLPLIKALRAAG--YEVHVVAPPGDELE-----EL-EALGV------KVIPIPLDRR----- 58 (359)
T ss_pred CeeEEEec---chhHHHHHHHHHHHHHhcC--CeeEEEecCCCccc-----cc-ccCCc------eEEecccccc-----
Confidence 46777766 5999999999999998875 45566665431110 00 01121 1222211100
Q ss_pred CCchhhhhHHHHHHHHHHHHHhccCCcEEEeCCCcccccc-e-eeccC-CeEEEEeecCCcchHHHhhhhccccccCchh
Q 022054 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-L-ARIFG-CRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (303)
Q Consensus 116 ~~~~~l~~~~l~~~~~~~~~l~~~~pDv~i~t~~~~~~~p-l-a~~~~-~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~ 192 (303)
..... ..+.......+.+++.+||+++.......... + ++..+ .+++..+|.... . ..
T Consensus 59 --~~~~~-~~~~~~~~~~~~~~~~~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------~-------~~--- 119 (359)
T cd03808 59 --GINPF-KDLKALLRLYRLLRKERPDIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGF------V-------FT--- 119 (359)
T ss_pred --ccChH-hHHHHHHHHHHHHHhcCCCEEEEccccchhHHHHHHHHcCCCCEEEEecCcch------h-------hc---
Confidence 00001 11111222344567889998775433222222 1 12123 344444454320 0 00
Q ss_pred hhhhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC--CCCceEEcCCCCCCcccccCCCCCCCCC
Q 022054 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI--PDRIKRVYPPCDTSGLQVLPLERSTEYP 270 (303)
Q Consensus 193 ~~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~--~~~~~VIYPPvd~~~~~~~~~~~~~~~~ 270 (303)
. .......+..++++..+.+|.++++|+..++.+.+.++. ...+.+++++++.+.+...+.....++.
T Consensus 120 -------~---~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (359)
T cd03808 120 -------S---GGLKRRLYLLLERLALRFTDKVIFQNEDDRDLALKLGIIKKKKTVLIPGSGVDLDRFSPSPEPIPEDDP 189 (359)
T ss_pred -------c---chhHHHHHHHHHHHHHhhccEEEEcCHHHHHHHHHhcCCCcCceEEecCCCCChhhcCccccccCCCCc
Confidence 0 001223334445666788999999999999999998763 2344555566676665422110122357
Q ss_pred EEEEEcCcccccChHHHHHHHHHcccC
Q 022054 271 AIISVAQFRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 271 ~iLsvgRl~p~Kn~~llI~Afa~L~~~ 297 (303)
.++++||+.++|+++.+++|+..+.++
T Consensus 190 ~i~~~G~~~~~k~~~~li~~~~~l~~~ 216 (359)
T cd03808 190 VFLFVARLLKDKGIDELLEAARILKAK 216 (359)
T ss_pred EEEEEeccccccCHHHHHHHHHHHHhc
Confidence 999999999999999999999998653
No 40
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=99.19 E-value=1.1e-09 Score=100.82 Aligned_cols=218 Identities=18% Similarity=0.124 Sum_probs=121.1
Q ss_pred EEEEEcCCCC-CCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccceeecc
Q 022054 36 SVAFFHPNTN-DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (303)
Q Consensus 36 rVa~~hp~l~-~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~~~~~ 114 (303)
||.++.+.+. ..||+|+++.+++++|.+.+. ++.+++...+.... . ... .+... .... .. ..
T Consensus 1 kIl~i~~~~~~~~gG~~~~~~~l~~~L~~~g~--~v~v~~~~~~~~~~-~-~~~---~~~~~----~~~~--~~-~~--- 63 (375)
T cd03821 1 KILHVIPSFDPKYGGPVRVVLNLSKALAKLGH--EVTVATTDAGGDPL-L-VAL---NGVPV----KLFS--IN-VA--- 63 (375)
T ss_pred CeEEEcCCCCcccCCeehHHHHHHHHHHhcCC--cEEEEecCCCCccc-h-hhc---cCcee----eecc--cc-hh---
Confidence 5788888774 689999999999999988754 55666654311110 0 000 00000 0000 00 00
Q ss_pred cCCchhhhhHHHHHHHHHHHHHhccCCcEEEeCCCc-cccccee---eccCCeEEEEeecCCcchHHHhhhhccccccCc
Q 022054 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGY-AFTYPLA---RIFGCRVICYTHYPTISLDMISRVREGSSMYNN 190 (303)
Q Consensus 115 ~~~~~~l~~~~l~~~~~~~~~l~~~~pDv~i~t~~~-~~~~pla---~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~ 190 (303)
.. .......+.............++|+++..... ....+.. ...+.|++.+.|... .. +.+.
T Consensus 64 -~~-~~~~~~~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~----~~~~------- 129 (375)
T cd03821 64 -YG-LNLARYLFPPSLLAWLRLNIREADIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGML-DP----WALP------- 129 (375)
T ss_pred -hh-hhhhhhccChhHHHHHHHhCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEccccc-cc----cccc-------
Confidence 00 00000000011111222345679976643211 1111211 125788888888643 00 0000
Q ss_pred hhhhhhchhhhHhH-HHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCC------
Q 022054 191 NASIAQSNWLSQCK-IVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL------ 263 (303)
Q Consensus 191 ~~~~~~~~~~~~~k-~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~~~~~------ 263 (303)
....+ .++... ..+...+.+|.++++|+.......+... ..++.|++|++|.+.+...+.
T Consensus 130 ---------~~~~~~~~~~~~---~~~~~~~~~~~i~~~s~~~~~~~~~~~~-~~~~~vi~~~~~~~~~~~~~~~~~~~~ 196 (375)
T cd03821 130 ---------HKALKKRLAWFL---FERRLLQAAAAVHATSEQEAAEIRRLGL-KAPIAVIPNGVDIPPFAALPSRGRRRK 196 (375)
T ss_pred ---------cchhhhHHHHHH---HHHHHHhcCCEEEECCHHHHHHHHhhCC-cccEEEcCCCcChhccCcchhhhhhhh
Confidence 01111 122111 2345567899999999888888776543 468999999999887753211
Q ss_pred -CCCCCCCEEEEEcCcccccChHHHHHHHHHcccC
Q 022054 264 -ERSTEYPAIISVAQFRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 264 -~~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~~ 297 (303)
....+.+.++++||+.++||++.+++|+..+.++
T Consensus 197 ~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~ 231 (375)
T cd03821 197 FPILPDKRIILFLGRLHPKKGLDLLIEAFAKLAER 231 (375)
T ss_pred ccCCCCCcEEEEEeCcchhcCHHHHHHHHHHhhhh
Confidence 1122357899999999999999999999998764
No 41
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=99.15 E-value=2.4e-09 Score=98.07 Aligned_cols=83 Identities=17% Similarity=0.082 Sum_probs=65.8
Q ss_pred HHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCC------CCCCCCCEEEEEcCcccccChHHHH
Q 022054 215 YGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL------ERSTEYPAIISVAQFRPEKVRYKLI 288 (303)
Q Consensus 215 ~~~~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~~~~~------~~~~~~~~iLsvgRl~p~Kn~~llI 288 (303)
.+...+.+|.+++.|++.++.+.+.+..+.++.|+++++|.+.+..... ........++++|++.+.|+++.++
T Consensus 142 ~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~li 221 (377)
T cd03798 142 LRRALRRADAVIAVSEALADELKALGIDPEKVTVIPNGVDTERFSPADRAEARKLGLPEDKKVILFVGRLVPRKGIDYLI 221 (377)
T ss_pred HHHHHhcCCeEEeCCHHHHHHHHHhcCCCCceEEcCCCcCcccCCCcchHHHHhccCCCCceEEEEeccCccccCHHHHH
Confidence 4455688999999999999999998521578999999999887753211 1112357899999999999999999
Q ss_pred HHHHHcccC
Q 022054 289 STRHILFNL 297 (303)
Q Consensus 289 ~Afa~L~~~ 297 (303)
+|++.+.++
T Consensus 222 ~~~~~~~~~ 230 (377)
T cd03798 222 EALARLLKK 230 (377)
T ss_pred HHHHHHHhc
Confidence 999998754
No 42
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=99.13 E-value=1.2e-09 Score=107.02 Aligned_cols=84 Identities=14% Similarity=0.004 Sum_probs=64.0
Q ss_pred HHHhccCCcEEEEcCHHHHHHHHH---------HhCC-CCCceEEcCCCCCCcccccCCC--------------------
Q 022054 215 YGLVGSCADLAMVNSSWTQSHIEK---------LWGI-PDRIKRVYPPCDTSGLQVLPLE-------------------- 264 (303)
Q Consensus 215 ~~~~~~~ad~viaNS~~t~~~i~~---------~~~~-~~~~~VIYPPvd~~~~~~~~~~-------------------- 264 (303)
.+.++..+|.++++|...++++.+ .++. ..++.+|+|.||.+.+......
T Consensus 204 ~~~~~~~ad~v~~vS~~~~~~i~~~~~~~gl~~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~ 283 (476)
T cd03791 204 LKAGIVYADAVTTVSPTYAREILTPEFGEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENKAA 283 (476)
T ss_pred HHHHHHhcCcCeecCHhHHHHhCCCCCCcchHHHHHhccCCeEEEeCCCcCcccCccccchhhhcCCccccccHHHHHHH
Confidence 445567899999999999999875 2222 4689999999998877521000
Q ss_pred --------CCCCCCEEEEEcCcccccChHHHHHHHHHcccCC
Q 022054 265 --------RSTEYPAIISVAQFRPEKVRYKLISTRHILFNLR 298 (303)
Q Consensus 265 --------~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~~~ 298 (303)
.....+.++++||+.++|+++++++|+..+.++.
T Consensus 284 l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~ 325 (476)
T cd03791 284 LQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELG 325 (476)
T ss_pred HHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHcC
Confidence 0123578999999999999999999999987653
No 43
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=99.13 E-value=9.9e-10 Score=104.19 Aligned_cols=203 Identities=15% Similarity=0.080 Sum_probs=107.4
Q ss_pred EEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccceeeccc
Q 022054 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (303)
Q Consensus 36 rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~~~~~~ 115 (303)
||++|-+.+ .+||+|+++.++++.|.+.+.+++ +++... .+......+ .....+.+ .+. .+
T Consensus 1 ki~~~~~~~-~~GGv~~~~~~l~~~l~~~g~~v~--~~~~~~---~~~~~~~~~-~~~~~~~g-~~~-~~---------- 61 (372)
T cd03792 1 KVLHVNSTP-YGGGVAEILHSLVPLMRDLGVDTR--WEVIKG---DPEFFNVTK-KFHNALQG-ADI-EL---------- 61 (372)
T ss_pred CeEEEeCCC-CCCcHHHHHHHHHHHHHHcCCCce--EEecCC---ChhHHHHHH-HhhHhhcC-CCC-CC----------
Confidence 588888888 689999999999999999876665 444321 111111000 00000000 000 00
Q ss_pred CCchhhhhHHHHHHH--HHHHHHhccCCcEEEeCCCcccccceee-ccCCeEEEEeecCCcchHHHhhhhccccccCchh
Q 022054 116 YPRFTMIGQSFGSVY--LSWEALCKFTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (303)
Q Consensus 116 ~~~~~l~~~~l~~~~--~~~~~l~~~~pDv~i~t~~~~~~~pla~-~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~ 192 (303)
+.. ....+.... .+.+.+...+||+++.........+.+. ..+.|++..+|.+. .. +
T Consensus 62 -~~~--~~~~~~~~~~~~~~~~~~~~~~Dvv~~h~~~~~~~~~~~~~~~~~~i~~~H~~~-~~------------~---- 121 (372)
T cd03792 62 -SEE--EKEIYLEWNEENAERPLLDLDADVVVIHDPQPLALPLFKKKRGRPWIWRCHIDL-SS------------P---- 121 (372)
T ss_pred -CHH--HHHHHHHHHHHHhccccccCCCCEEEECCCCchhHHHhhhcCCCeEEEEeeeec-CC------------C----
Confidence 000 000000000 0011133568998875433332222222 23788899999855 00 0
Q ss_pred hhhhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccc-c----------
Q 022054 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQV-L---------- 261 (303)
Q Consensus 193 ~~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~~-~---------- 261 (303)
. +. .++.. ++..+++|.+++.|+ +.+.+.++ .+..|++|++|...... .
T Consensus 122 -------~---~~-~~~~~----~~~~~~~d~~i~~~~---~~~~~~~~--~~~~vipngvd~~~~~~~~~~~~~~~~~~ 181 (372)
T cd03792 122 -------N---RR-VWDFL----QPYIEDYDAAVFHLP---EYVPPQVP--PRKVIIPPSIDPLSGKNRELSPADIEYIL 181 (372)
T ss_pred -------c---HH-HHHHH----HHHHHhCCEEeecHH---HhcCCCCC--CceEEeCCCCCCCccccCCCCHHHHHHHH
Confidence 0 01 11111 223366899998882 22233222 33349999999753110 0
Q ss_pred -CCCCCCCCCEEEEEcCcccccChHHHHHHHHHcccC
Q 022054 262 -PLERSTEYPAIISVAQFRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 262 -~~~~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~~ 297 (303)
........++++++||+.++||++.+|+||+.+.++
T Consensus 182 ~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~ 218 (372)
T cd03792 182 EKYGIDPERPYITQVSRFDPWKDPFGVIDAYRKVKER 218 (372)
T ss_pred HHhCCCCCCcEEEEEeccccccCcHHHHHHHHHHHhh
Confidence 001112357999999999999999999999988655
No 44
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.12 E-value=1.3e-09 Score=100.67 Aligned_cols=214 Identities=17% Similarity=0.102 Sum_probs=118.0
Q ss_pred EEEEEcCCCC-CCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccceeecc
Q 022054 36 SVAFFHPNTN-DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (303)
Q Consensus 36 rVa~~hp~l~-~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~~~~~ 114 (303)
||+++.+... ..||+|+.+.+++++|.+.++ ++.+++...+... ..... ...+. ......
T Consensus 1 kIl~i~~~~~p~~~G~~~~~~~l~~~L~~~g~--~v~~~~~~~~~~~----~~~~~--~~~~~----~~~~~~------- 61 (364)
T cd03814 1 RIAIVTDTFLPQVNGVVRTLQRLVEHLRARGH--EVLVIAPGPFRES----EGPAR--VVPVP----SVPLPG------- 61 (364)
T ss_pred CeEEEecccCccccceehHHHHHHHHHHHCCC--EEEEEeCCchhhc----cCCCC--ceeec----ccccCc-------
Confidence 4777775443 349999999999999999764 5566665431100 00000 00000 000000
Q ss_pred cCCchhhhhHHHHHHHHHHHHHhccCCcEEEeCCCcccccc-e--eeccCCeEEEEeecCCcchHHHhhhhccccccCch
Q 022054 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-L--ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNN 191 (303)
Q Consensus 115 ~~~~~~l~~~~l~~~~~~~~~l~~~~pDv~i~t~~~~~~~p-l--a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~ 191 (303)
+........ ......+.+++.+||+++.......... . +...+.|.+..+|... . .+... +.
T Consensus 62 -~~~~~~~~~---~~~~~~~~~~~~~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~----~~~~~----~~-- 126 (364)
T cd03814 62 -YPEIRLALP---PRRRVRRLLDAFAPDVVHIATPGPLGLAALRAARRLGIPVVTSYHTDF-P----EYLRY----YG-- 126 (364)
T ss_pred -ccceEeccc---chhhHHHHHHhcCCCEEEEeccchhhHHHHHHHHHcCCCEEEEEecCh-H----HHhhh----cc--
Confidence 000000000 0111223356789997764322221111 1 1235788888888643 1 00000 00
Q ss_pred hhhhhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCCCC------
Q 022054 192 ASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLER------ 265 (303)
Q Consensus 192 ~~~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~~~~~~~------ 265 (303)
....+ .......++..+.+|.+++.|++.++.+.+... .++.++++++|.+.+.......
T Consensus 127 --------~~~~~----~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 192 (364)
T cd03814 127 --------LGPLS----WLAWAYLRWFHNRADRVLVPSPSLADELRARGF--RRVRLWPRGVDTELFHPRRRDEALRARL 192 (364)
T ss_pred --------cchHh----HhhHHHHHHHHHhCCEEEeCCHHHHHHHhccCC--CceeecCCCccccccCcccccHHHHHHh
Confidence 00111 111223445568899999999999996665443 6789999999987664210000
Q ss_pred -CCCCCEEEEEcCcccccChHHHHHHHHHcccC
Q 022054 266 -STEYPAIISVAQFRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 266 -~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~~ 297 (303)
..+...++++||+.++|+++.+++|++.+.++
T Consensus 193 ~~~~~~~i~~~G~~~~~k~~~~~i~~~~~l~~~ 225 (364)
T cd03814 193 GPPDRPVLLYVGRLAPEKNLEALLDADLPLRRR 225 (364)
T ss_pred CCCCCeEEEEEeccccccCHHHHHHHHHHhhhc
Confidence 11246899999999999999999999999764
No 45
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=99.11 E-value=4.8e-09 Score=110.28 Aligned_cols=251 Identities=11% Similarity=0.045 Sum_probs=135.1
Q ss_pred CCCCcEEEEEcCCC---------C---CCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCC---hh--HHHHhhh----
Q 022054 31 RNRTTSVAFFHPNT---------N---DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAF---PD--SLLARAV---- 89 (303)
Q Consensus 31 ~~~~~rVa~~hp~l---------~---~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~---~~--~~~~~~~---- 89 (303)
..+++.|+++..+- + --||--.++.+||++|.+.+--++|.+||...+.+ ++ +-.+.+.
T Consensus 166 ~~~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~~y~~p~e~~~~~~~ 245 (1050)
T TIGR02468 166 KEKKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEMLTPRSS 245 (1050)
T ss_pred ccCceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCccccccccCCcccccccccc
Confidence 45678898886532 1 13778889999999999974113788999754211 00 0000000
Q ss_pred hccCcc--ccCCCeEEEccccceeecccCCchhhhhHHHHHHHHH-HHHHhc--------------cCCcEEEeCCCccc
Q 022054 90 DRFGVE--LLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLS-WEALCK--------------FTPLYYFDTSGYAF 152 (303)
Q Consensus 90 ~~~~~~--l~~~~~~i~L~~~~~~~~~~~~~~~l~~~~l~~~~~~-~~~l~~--------------~~pDv~i~t~~~~~ 152 (303)
+.+..+ ..+.++++.+..+ ++..+..-..+|..+..+.-. .+.+.+ ..||+++...+.+.
T Consensus 246 ~~~~~~~~~~~g~rIvRip~G---P~~~~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pDvIHaHyw~sG 322 (1050)
T TIGR02468 246 ENDGDEMGESSGAYIIRIPFG---PRDKYIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPYVIHGHYADAG 322 (1050)
T ss_pred ccccccccCCCCeEEEEeccC---CCCCCcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCEEEECcchHH
Confidence 000001 1234444433321 111111122344444322211 111211 24999886544432
Q ss_pred ccce--eeccCCeEEEEeecCCcchHHHhhhhccccccCchhhhhhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCH
Q 022054 153 TYPL--ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSS 230 (303)
Q Consensus 153 ~~pl--a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~ 230 (303)
.... +...+.|.|...|+-- .+..+++...+.... +.+. ...+ .-.++ ...+.++..||.|||+|+
T Consensus 323 ~aa~~L~~~lgVP~V~T~HSLg--r~K~~~ll~~g~~~~--~~~~-----~~y~-~~~Ri--~~Ee~~l~~Ad~VIasT~ 390 (1050)
T TIGR02468 323 DSAALLSGALNVPMVLTGHSLG--RDKLEQLLKQGRMSK--EEIN-----STYK-IMRRI--EAEELSLDASEIVITSTR 390 (1050)
T ss_pred HHHHHHHHhhCCCEEEECccch--hhhhhhhcccccccc--cccc-----cccc-hHHHH--HHHHHHHHhcCEEEEeCH
Confidence 2221 2346899999999842 111110000000000 0000 0000 00111 135677889999999999
Q ss_pred HHHHHHHHHhCC-----------------------CCCceEEcCCCCCCcccccC--CC---------------------
Q 022054 231 WTQSHIEKLWGI-----------------------PDRIKRVYPPCDTSGLQVLP--LE--------------------- 264 (303)
Q Consensus 231 ~t~~~i~~~~~~-----------------------~~~~~VIYPPvd~~~~~~~~--~~--------------------- 264 (303)
.-++++.++|+- ..++.||+|.||++.|.... ..
T Consensus 391 qE~~eq~~lY~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~~~~~l 470 (1050)
T TIGR02468 391 QEIEEQWGLYDGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPPIWSEI 470 (1050)
T ss_pred HHHHHHHHHhccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccccccchhhHHH
Confidence 999998888751 12789999999999886310 00
Q ss_pred ----CCCCCCEEEEEcCcccccChHHHHHHHHHccc
Q 022054 265 ----RSTEYPAIISVAQFRPEKVRYKLISTRHILFN 296 (303)
Q Consensus 265 ----~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~ 296 (303)
.....++||++||+.|+||++.+|+||+.+++
T Consensus 471 ~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~ 506 (1050)
T TIGR02468 471 MRFFTNPRKPMILALARPDPKKNITTLVKAFGECRP 506 (1050)
T ss_pred HhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHh
Confidence 01124689999999999999999999999864
No 46
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=99.11 E-value=3.7e-09 Score=97.40 Aligned_cols=219 Identities=14% Similarity=0.098 Sum_probs=121.0
Q ss_pred EEEEEcCC-CCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccceeecc
Q 022054 36 SVAFFHPN-TNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (303)
Q Consensus 36 rVa~~hp~-l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~~~~~ 114 (303)
||.++.+. ....||+++.+.+++++|.+.+. ++.+++........ ... ..... ..... ..
T Consensus 1 kil~~~~~~~p~~~G~~~~~~~l~~~L~~~g~--~v~v~~~~~~~~~~------~~~-~~~~~----~~~~~------~~ 61 (374)
T cd03817 1 KIGIFTDTYLPQVNGVATSIRRLAEELEKRGH--EVYVVAPSYPGAPE------EEE-VVVVR----PFRVP------TF 61 (374)
T ss_pred CeeEeehhccCCCCCeehHHHHHHHHHHHcCC--eEEEEeCCCCCCCc------ccc-ccccc----ccccc------cc
Confidence 45666654 34568999999999999999864 45666643211100 000 00000 00000 00
Q ss_pred cCCchhhhhHHHHHHHHHHHHHhccCCcEEEeCCCcccccce---eeccCCeEEEEeecCCcchHHHhhhhccccccCch
Q 022054 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPL---ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNN 191 (303)
Q Consensus 115 ~~~~~~l~~~~l~~~~~~~~~l~~~~pDv~i~t~~~~~~~pl---a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~ 191 (303)
........+. ......+.++..+||+++........... +...+.|++...|.+. . ++.....
T Consensus 62 ~~~~~~~~~~---~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~-~~~~~~~--------- 127 (374)
T cd03817 62 KYPDFRLPLP---IPRALIIILKELGPDIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMY-E-DYTHYVP--------- 127 (374)
T ss_pred hhhhhhcccc---HHHHHHHHHhhcCCCEEEECCchhhhhHHHHHHHHcCCCEEEEecCCH-H-HHHHHHh---------
Confidence 0000111111 11112223667889987755332211111 1234688888888754 1 1111100
Q ss_pred hhhhhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCC-------C
Q 022054 192 ASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL-------E 264 (303)
Q Consensus 192 ~~~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~~~~~-------~ 264 (303)
.. ......... ....+...+.+|.++++|++.++.+.+. +...++.|+++++|.+.+...+. .
T Consensus 128 ----~~--~~~~~~~~~---~~~~~~~~~~~d~i~~~s~~~~~~~~~~-~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~ 197 (374)
T cd03817 128 ----LG--RLLARAVVR---RKLSRRFYNRCDAVIAPSEKIADLLREY-GVKRPIEVIPTGIDLDRFEPVDGDDERRKLG 197 (374)
T ss_pred ----cc--cchhHHHHH---HHHHHHHhhhCCEEEeccHHHHHHHHhc-CCCCceEEcCCccchhccCccchhHHHHhcC
Confidence 00 000011111 0345566789999999999999998875 33355899999999877753211 1
Q ss_pred CCCCCCEEEEEcCcccccChHHHHHHHHHcccC
Q 022054 265 RSTEYPAIISVAQFRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 265 ~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~~ 297 (303)
....+..++++||+.++||++.+++|++.+.++
T Consensus 198 ~~~~~~~i~~~G~~~~~k~~~~l~~~~~~~~~~ 230 (374)
T cd03817 198 IPEDEPVLLYVGRLAKEKNIDFLIRAFARLLKE 230 (374)
T ss_pred CCCCCeEEEEEeeeecccCHHHHHHHHHHHHHh
Confidence 122357899999999999999999999998764
No 47
>PLN02275 transferase, transferring glycosyl groups
Probab=99.11 E-value=5.8e-09 Score=99.47 Aligned_cols=84 Identities=19% Similarity=0.313 Sum_probs=62.0
Q ss_pred HHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCCC---CCCCCCEEEEEcCcccccChH
Q 022054 209 TFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE---RSTEYPAIISVAQFRPEKVRY 285 (303)
Q Consensus 209 ~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~~~~~~---~~~~~~~iLsvgRl~p~Kn~~ 285 (303)
+++.++.++.++.+|.++++|+.+++.+.+.+|. ++.||||.+ .+.+...... .......++++||+.++|+++
T Consensus 153 ~~~~~~e~~~~~~ad~ii~~S~~~~~~l~~~~g~--~i~vi~n~~-~~~f~~~~~~~~~~~~~~~~i~~~grl~~~k~~~ 229 (371)
T PLN02275 153 RLYRWYERHYGKMADGHLCVTKAMQHELDQNWGI--RATVLYDQP-PEFFRPASLEIRLRPNRPALVVSSTSWTPDEDFG 229 (371)
T ss_pred HHHHHHHHHHHhhCCEEEECCHHHHHHHHHhcCC--CeEEECCCC-HHHcCcCCchhcccCCCcEEEEEeCceeccCCHH
Confidence 3444456666789999999999999999988873 488999974 4555321101 111234678999999999999
Q ss_pred HHHHHHHHcc
Q 022054 286 KLISTRHILF 295 (303)
Q Consensus 286 llI~Afa~L~ 295 (303)
.+++|++.+.
T Consensus 230 ~li~a~~~l~ 239 (371)
T PLN02275 230 ILLEAAVMYD 239 (371)
T ss_pred HHHHHHHHHH
Confidence 9999999874
No 48
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=99.10 E-value=2.1e-09 Score=105.65 Aligned_cols=83 Identities=16% Similarity=0.092 Sum_probs=63.2
Q ss_pred HHHhccCCcEEEEcCHHHHHHHHHH-hCC---------CCCceEEcCCCCCCcccccC----------------------
Q 022054 215 YGLVGSCADLAMVNSSWTQSHIEKL-WGI---------PDRIKRVYPPCDTSGLQVLP---------------------- 262 (303)
Q Consensus 215 ~~~~~~~ad~viaNS~~t~~~i~~~-~~~---------~~~~~VIYPPvd~~~~~~~~---------------------- 262 (303)
.+.++..+|.++++|+..++++.+. +|. +.++.+|+|.+|++.+....
T Consensus 199 ~k~~~~~ad~v~tVS~~~~~ei~~~~~~~~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~ 278 (473)
T TIGR02095 199 LKGGIVYADRVTTVSPTYAREILTPEFGYGLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEA 278 (473)
T ss_pred HHHHHHhCCcCeecCHhHHHHhcCCcCCccchhHHHhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhHHH
Confidence 3456688999999999999999763 221 35899999999998765110
Q ss_pred ------CCCCCCCCEEEEEcCcccccChHHHHHHHHHcccC
Q 022054 263 ------LERSTEYPAIISVAQFRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 263 ------~~~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~~ 297 (303)
.......+.++++||+.++|+++++|+|++++.++
T Consensus 279 l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~ 319 (473)
T TIGR02095 279 LQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLEL 319 (473)
T ss_pred HHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHc
Confidence 00011257899999999999999999999998754
No 49
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=99.10 E-value=2.2e-09 Score=103.82 Aligned_cols=81 Identities=21% Similarity=0.181 Sum_probs=64.0
Q ss_pred HHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccCCCCCCCCCEEEEEcCcccccChHHHHHHHHHc
Q 022054 216 GLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKVRYKLISTRHIL 294 (303)
Q Consensus 216 ~~~~~~ad~viaNS~~t~~~i~~~~~~-~~~~~VIYPPvd~~~~~~~~~~~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L 294 (303)
+...+++|.++++|++.++.+.+. |. ++++.|+|+++|.+.|...+......+..++++||+.++|+++.+|+|++.+
T Consensus 169 ~~~~~~ad~vv~~S~~~~~~l~~~-g~~~~ki~vi~nGvd~~~f~~~~~~~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l 247 (406)
T PRK15427 169 QQLFRRGDLMLPISDLWAGRLQKM-GCPPEKIAVSRMGVDMTRFSPRPVKAPATPLEIISVARLTEKKGLHVAIEACRQL 247 (406)
T ss_pred HHHHHhCCEEEECCHHHHHHHHHc-CCCHHHEEEcCCCCCHHHcCCCccccCCCCeEEEEEeCcchhcCHHHHHHHHHHH
Confidence 334478999999999999999875 66 5678999999999887532111112234699999999999999999999999
Q ss_pred ccC
Q 022054 295 FNL 297 (303)
Q Consensus 295 ~~~ 297 (303)
+++
T Consensus 248 ~~~ 250 (406)
T PRK15427 248 KEQ 250 (406)
T ss_pred Hhh
Confidence 764
No 50
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.09 E-value=3.7e-09 Score=104.83 Aligned_cols=135 Identities=19% Similarity=0.118 Sum_probs=88.0
Q ss_pred HHHhccCCcEEEeCCCcccccc-e-eeccCCeEEEE-eec-CCcchHHHhhhhccccccCchhhhhhchhhhHhHHHHHH
Q 022054 134 EALCKFTPLYYFDTSGYAFTYP-L-ARIFGCRVICY-THY-PTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYT 209 (303)
Q Consensus 134 ~~l~~~~pDv~i~t~~~~~~~p-l-a~~~~~~~i~Y-~H~-P~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~ 209 (303)
..+++.+||+++.....++... + +++.+.|++.. .|. +... + ......-|
T Consensus 274 ~~ir~~rpDIVHt~~~~a~l~g~laA~lagvpviv~~~h~~~~~~----~--------------------~r~~~~e~-- 327 (578)
T PRK15490 274 PHLCERKLDYLSVWQDGACLMIALAALIAGVPRIQLGLRGLPPVV----R--------------------KRLFKPEY-- 327 (578)
T ss_pred HHHHHcCCCEEEEcCcccHHHHHHHHHhcCCCEEEEeecccCCcc----h--------------------hhHHHHHH--
Confidence 3468899999997655543343 2 34678888543 552 2200 0 00000101
Q ss_pred HHHHHHH--HhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccC------C---C--CCCCCCEEEEE
Q 022054 210 FFSWMYG--LVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLP------L---E--RSTEYPAIISV 275 (303)
Q Consensus 210 ~~~~l~~--~~~~~ad~viaNS~~t~~~i~~~~~~-~~~~~VIYPPvd~~~~~~~~------~---~--~~~~~~~iLsv 275 (303)
..+++ ...+.+| +++||..+++++.+.++. ++++.||||.+|++.|.... + . -....+++.++
T Consensus 328 --~~~~~a~~i~~~sd-~v~~s~~v~~~l~~~lgip~~KI~VIyNGVD~~rf~p~~~~~~~~r~~~~~~l~~~~~vIg~V 404 (578)
T PRK15490 328 --EPLYQALAVVPGVD-FMSNNHCVTRHYADWLKLEAKHFQVVYNGVLPPSTEPSSEVPHKIWQQFTQKTQDADTTIGGV 404 (578)
T ss_pred --HHhhhhceeEecch-hhhccHHHHHHHHHHhCCCHHHEEEEeCCcchhhcCccchhhHHHHHHhhhccCCCCcEEEEE
Confidence 11122 2245677 889999999999999987 77899999999988765310 0 0 01124578899
Q ss_pred cCcccccChHHHHHHHHHcccC
Q 022054 276 AQFRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 276 gRl~p~Kn~~llI~Afa~L~~~ 297 (303)
|||.++||++.+|+|++.+.++
T Consensus 405 gRl~~~Kg~~~LI~A~a~llk~ 426 (578)
T PRK15490 405 FRFVGDKNPFAWIDFAARYLQH 426 (578)
T ss_pred EEEehhcCHHHHHHHHHHHHhH
Confidence 9999999999999999876543
No 51
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=99.06 E-value=7.6e-09 Score=96.25 Aligned_cols=78 Identities=15% Similarity=-0.033 Sum_probs=58.7
Q ss_pred cCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCccccc-------CCCCCCCCCEEEEEcCccc--ccChHHHHH
Q 022054 220 SCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVL-------PLERSTEYPAIISVAQFRP--EKVRYKLIS 289 (303)
Q Consensus 220 ~~ad~viaNS~~t~~~i~~~~~~-~~~~~VIYPPvd~~~~~~~-------~~~~~~~~~~iLsvgRl~p--~Kn~~llI~ 289 (303)
..++.++++|+++++.+.+.++. ..++.|++||+|.+.+... ......+...++..|+... +|+++.+++
T Consensus 134 ~~~~~~v~~s~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~ 213 (365)
T cd03825 134 DLNLTIVAPSRWLADCARSSSLFKGIPIEVIPNGIDTTIFRPRDKREARKRLGLPADKKIILFGAVGGTDPRKGFDELIE 213 (365)
T ss_pred cCCcEEEehhHHHHHHHHhccccCCCceEEeCCCCcccccCCCcHHHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHH
Confidence 67899999999999999998755 5789999999998876421 0111111345666666655 899999999
Q ss_pred HHHHcccC
Q 022054 290 TRHILFNL 297 (303)
Q Consensus 290 Afa~L~~~ 297 (303)
|++.+.++
T Consensus 214 a~~~l~~~ 221 (365)
T cd03825 214 ALKRLAER 221 (365)
T ss_pred HHHHhhhc
Confidence 99998763
No 52
>PLN02316 synthase/transferase
Probab=99.05 E-value=1.3e-08 Score=107.16 Aligned_cols=220 Identities=13% Similarity=0.096 Sum_probs=126.1
Q ss_pred CCCcEEEEEcCCCC---CCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhh--hccC--c---c----cc
Q 022054 32 NRTTSVAFFHPNTN---DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAV--DRFG--V---E----LL 97 (303)
Q Consensus 32 ~~~~rVa~~hp~l~---~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~--~~~~--~---~----l~ 97 (303)
.++|+|+++-..+. .-||---|+..|.++|++.++ +|.|+|..++.-.......+. ..+. . . ..
T Consensus 585 ~~pM~Il~VSsE~~P~aKvGGLgDVV~sLp~ALa~~Gh--~V~VitP~Y~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 662 (1036)
T PLN02316 585 EPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNH--NVDIILPKYDCLNLSHVKDLHYQRSYSWGGTEIKVWFGKV 662 (1036)
T ss_pred CCCcEEEEEEcccCCCCCcCcHHHHHHHHHHHHHHcCC--EEEEEecCCcccchhhcccceEEEEeccCCEEEEEEEEEE
Confidence 45689999874332 369999999999999999865 556777755321000000011 0010 0 0 01
Q ss_pred CCCeEEEccccc-e-eecccCC------chhhhhHHHHHHHHHHHHHh--ccCCcEEEeCCCcccccce-ee-------c
Q 022054 98 HPPKVVHLYRRK-W-IEESTYP------RFTMIGQSFGSVYLSWEALC--KFTPLYYFDTSGYAFTYPL-AR-------I 159 (303)
Q Consensus 98 ~~~~~i~L~~~~-~-~~~~~~~------~~~l~~~~l~~~~~~~~~l~--~~~pDv~i~t~~~~~~~pl-a~-------~ 159 (303)
+.+.+.-+.... . -....+. +|..++++ +.+.++ ..+|||++...+++..+|. ++ +
T Consensus 663 ~GV~vyfl~~~~~~F~r~~~Yg~~Dd~~RF~~F~~A------ale~l~~~~~~PDIIHaHDW~talva~llk~~~~~~~~ 736 (1036)
T PLN02316 663 EGLSVYFLEPQNGMFWAGCVYGCRNDGERFGFFCHA------ALEFLLQSGFHPDIIHCHDWSSAPVAWLFKDHYAHYGL 736 (1036)
T ss_pred CCcEEEEEeccccccCCCCCCCchhHHHHHHHHHHH------HHHHHHhcCCCCCEEEECCChHHHHHHHHHHhhhhhcc
Confidence 223232222110 0 0000111 11111111 122232 2479998866554444442 11 1
Q ss_pred cCCeEEEEeecCCcchHHHhhhhccccccCchhhhhhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHH
Q 022054 160 FGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKL 239 (303)
Q Consensus 160 ~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~ 239 (303)
.+.|+|..+|+... . ... .+..+..+|.|+|+|...+++|.+.
T Consensus 737 ~~~p~V~TiHnl~~---------------~----------~n~------------lk~~l~~AD~ViTVS~tya~EI~~~ 779 (1036)
T PLN02316 737 SKARVVFTIHNLEF---------------G----------ANH------------IGKAMAYADKATTVSPTYSREVSGN 779 (1036)
T ss_pred CCCCEEEEeCCccc---------------c----------hhH------------HHHHHHHCCEEEeCCHHHHHHHHhc
Confidence 35789999998551 0 000 1123367999999999999999986
Q ss_pred hCC---CCCceEEcCCCCCCccccc-----CC----------------------C-CCCCCCEEEEEcCcccccChHHHH
Q 022054 240 WGI---PDRIKRVYPPCDTSGLQVL-----PL----------------------E-RSTEYPAIISVAQFRPEKVRYKLI 288 (303)
Q Consensus 240 ~~~---~~~~~VIYPPvd~~~~~~~-----~~----------------------~-~~~~~~~iLsvgRl~p~Kn~~llI 288 (303)
+.+ ..++.+|+|.||++.+... +. . .....+.+++||||.++|++++++
T Consensus 780 ~~l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi 859 (1036)
T PLN02316 780 SAIAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLKQADLPLVGIITRLTHQKGIHLIK 859 (1036)
T ss_pred cCcccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhCCCcccCeEEEEEeccccccCHHHHH
Confidence 554 3689999999998765310 00 0 001246899999999999999999
Q ss_pred HHHHHccc
Q 022054 289 STRHILFN 296 (303)
Q Consensus 289 ~Afa~L~~ 296 (303)
+|+..+.+
T Consensus 860 ~Al~~ll~ 867 (1036)
T PLN02316 860 HAIWRTLE 867 (1036)
T ss_pred HHHHHHhh
Confidence 99998754
No 53
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=99.02 E-value=1e-09 Score=89.84 Aligned_cols=155 Identities=19% Similarity=0.174 Sum_probs=73.7
Q ss_pred ChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccceeecccCCchhhhhHHHH
Q 022054 48 GGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFG 127 (303)
Q Consensus 48 GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~~~~~~~~~~~l~~~~l~ 127 (303)
||+|+++.+++++|.+.|. ++.+++...+... . . .....+.+..+... +... .+..+ .
T Consensus 1 GG~~~~~~~l~~~L~~~G~--~V~v~~~~~~~~~----~------~-~~~~~~~~~~~~~~----~~~~-~~~~~-~--- 58 (160)
T PF13579_consen 1 GGIERYVRELARALAARGH--EVTVVTPQPDPED----D------E-EEEDGVRVHRLPLP----RRPW-PLRLL-R--- 58 (160)
T ss_dssp SHHHHHHHHHHHHHHHTT---EEEEEEE---GGG-----------S-EEETTEEEEEE--S-----SSS-GGGHC-C---
T ss_pred CCHHHHHHHHHHHHHHCCC--EEEEEecCCCCcc----c------c-cccCCceEEeccCC----ccch-hhhhH-H---
Confidence 8999999999999999864 5567665431110 0 0 01122223322110 1000 11111 1
Q ss_pred HHHHHHHHH--hccCCcEEEeCCCcccccc-eee-ccCCeEEEEeecCCcchHHHhhhhccccccCchhhhhhchhhhHh
Q 022054 128 SVYLSWEAL--CKFTPLYYFDTSGYAFTYP-LAR-IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQC 203 (303)
Q Consensus 128 ~~~~~~~~l--~~~~pDv~i~t~~~~~~~p-la~-~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (303)
......+.+ +..+||+++.......... +++ ..+.|+++.+|....... .+..
T Consensus 59 ~~~~~~~~l~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~-----------------------~~~~ 115 (160)
T PF13579_consen 59 FLRRLRRLLAARRERPDVVHAHSPTAGLVAALARRRRGIPLVVTVHGTLFRRG-----------------------SRWK 115 (160)
T ss_dssp HHHHHHHHCHHCT---SEEEEEHHHHHHHHHHHHHHHT--EEEE-SS-T-----------------------------HH
T ss_pred HHHHHHHHHhhhccCCeEEEecccchhHHHHHHHHccCCcEEEEECCCchhhc-----------------------cchh
Confidence 111122234 6788998875543211111 223 468999999997431000 0111
Q ss_pred HHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCC
Q 022054 204 KIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPP 252 (303)
Q Consensus 204 k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~-~~~~~VIYPP 252 (303)
+. ++.+++++..+.+|.++++|+.+++.+.+ +|. ++++.||||+
T Consensus 116 ~~----~~~~~~~~~~~~ad~vi~~S~~~~~~l~~-~g~~~~ri~vipnG 160 (160)
T PF13579_consen 116 RR----LYRWLERRLLRRADRVIVVSEAMRRYLRR-YGVPPDRIHVIPNG 160 (160)
T ss_dssp HH----HHHHHHHHHHHH-SEEEESSHHHHHHHHH-H---GGGEEE----
T ss_pred hH----HHHHHHHHHHhcCCEEEECCHHHHHHHHH-hCCCCCcEEEeCcC
Confidence 22 22344666778899999999999999999 887 7789999985
No 54
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=99.01 E-value=6.5e-09 Score=99.48 Aligned_cols=76 Identities=17% Similarity=0.104 Sum_probs=60.4
Q ss_pred CCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccC-------CCCCCCCCEEEEEcCcccccChHHHHHHHHH
Q 022054 221 CADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLP-------LERSTEYPAIISVAQFRPEKVRYKLISTRHI 293 (303)
Q Consensus 221 ~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~~~~-------~~~~~~~~~iLsvgRl~p~Kn~~llI~Afa~ 293 (303)
++|.++++|+++++.+.+.++ ..++.||||++|.+.+.... ......+..++++||+.++|+++.+|+|++.
T Consensus 139 ~~~~ii~~S~~~~~~~~~~~~-~~~i~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A~~~ 217 (380)
T PRK15484 139 KNAKIIVPSQFLKKFYEERLP-NADISIVPNGFCLETYQSNPQPNLRQQLNISPDETVLLYAGRISPDKGILLLMQAFEK 217 (380)
T ss_pred cCCEEEEcCHHHHHHHHhhCC-CCCEEEecCCCCHHHcCCcchHHHHHHhCCCCCCeEEEEeccCccccCHHHHHHHHHH
Confidence 579999999999999998765 46789999999987765211 0111125689999999999999999999999
Q ss_pred cccC
Q 022054 294 LFNL 297 (303)
Q Consensus 294 L~~~ 297 (303)
+.++
T Consensus 218 l~~~ 221 (380)
T PRK15484 218 LATA 221 (380)
T ss_pred HHHh
Confidence 8654
No 55
>PRK14099 glycogen synthase; Provisional
Probab=98.97 E-value=1.8e-08 Score=99.74 Aligned_cols=83 Identities=16% Similarity=0.027 Sum_probs=62.7
Q ss_pred HHHhccCCcEEEEcCHHHHHHHHHHh-C--------C-CCCceEEcCCCCCCcccccC----------------------
Q 022054 215 YGLVGSCADLAMVNSSWTQSHIEKLW-G--------I-PDRIKRVYPPCDTSGLQVLP---------------------- 262 (303)
Q Consensus 215 ~~~~~~~ad~viaNS~~t~~~i~~~~-~--------~-~~~~~VIYPPvd~~~~~~~~---------------------- 262 (303)
.++.+.++|.|+|+|+..++++++.+ | . .+++.+|+|.||++.+....
T Consensus 203 ~k~~i~~ad~vitVS~~~a~ei~~~~~g~gl~~~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~ 282 (485)
T PRK14099 203 LKAGLQLADRITTVSPTYALEIQGPEAGMGLDGLLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAA 282 (485)
T ss_pred HHHHHHhcCeeeecChhHHHHHhcccCCcChHHHHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHH
Confidence 44566889999999999999998743 1 1 46899999999988764210
Q ss_pred ------CCCCCCCCEEEEEcCcccccChHHHHHHHHHcccC
Q 022054 263 ------LERSTEYPAIISVAQFRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 263 ------~~~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~~ 297 (303)
.......+++.+|||+.++||++++|+|++.+.++
T Consensus 283 l~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~ 323 (485)
T PRK14099 283 LQARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGE 323 (485)
T ss_pred HHHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHhc
Confidence 00011135788999999999999999999988643
No 56
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=98.94 E-value=1.8e-08 Score=95.00 Aligned_cols=203 Identities=10% Similarity=0.077 Sum_probs=111.7
Q ss_pred cEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccceeecc
Q 022054 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (303)
Q Consensus 35 ~rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~~~~~ 114 (303)
|||.|+- . +.||+|+++.+++++|++.+ +++.+.+...+... ..+++ .+. ++..+.........
T Consensus 2 ~~i~i~~--~-g~gG~~~~~~~la~~L~~~g--~ev~vv~~~~~~~~----~~~~~-~g~------~~~~~~~~~~~~~~ 65 (357)
T PRK00726 2 KKILLAG--G-GTGGHVFPALALAEELKKRG--WEVLYLGTARGMEA----RLVPK-AGI------EFHFIPSGGLRRKG 65 (357)
T ss_pred cEEEEEc--C-cchHhhhHHHHHHHHHHhCC--CEEEEEECCCchhh----hcccc-CCC------cEEEEeccCcCCCC
Confidence 5666654 3 45899999999999999985 45566664321100 11111 122 22222211000000
Q ss_pred cCCchhhhhHHHHHHHHHHHHHhccCCcEEEeCCCcccccc-e-eeccCCeEEEEeecCCcchHHHhhhhccccccCchh
Q 022054 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-L-ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (303)
Q Consensus 115 ~~~~~~l~~~~l~~~~~~~~~l~~~~pDv~i~t~~~~~~~p-l-a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~ 192 (303)
...+....++.+..+....+.+++.+||++++.++..+... + ++..+.|+++++|...
T Consensus 66 ~~~~l~~~~~~~~~~~~~~~~ik~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~-------------------- 125 (357)
T PRK00726 66 SLANLKAPFKLLKGVLQARKILKRFKPDVVVGFGGYVSGPGGLAARLLGIPLVIHEQNAV-------------------- 125 (357)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCcchhHHHHHHHHcCCCEEEEcCCCC--------------------
Confidence 00011112232333333455577889999998765443333 2 2346788887665422
Q ss_pred hhhhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCC----CCCCC
Q 022054 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL----ERSTE 268 (303)
Q Consensus 193 ~~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~~~~~----~~~~~ 268 (303)
.+.. .++..+.+|.+++.|+.+. .+ .+ ++++.|++||++.+.+..... .....
T Consensus 126 -------~~~~-----------~r~~~~~~d~ii~~~~~~~---~~-~~-~~~i~vi~n~v~~~~~~~~~~~~~~~~~~~ 182 (357)
T PRK00726 126 -------PGLA-----------NKLLARFAKKVATAFPGAF---PE-FF-KPKAVVTGNPVREEILALAAPPARLAGREG 182 (357)
T ss_pred -------ccHH-----------HHHHHHHhchheECchhhh---hc-cC-CCCEEEECCCCChHhhcccchhhhccCCCC
Confidence 0000 1122256899999988442 22 12 589999999999876542110 11122
Q ss_pred CCEEEEEcCcccccChHHHH-HHHHHccc
Q 022054 269 YPAIISVAQFRPEKVRYKLI-STRHILFN 296 (303)
Q Consensus 269 ~~~iLsvgRl~p~Kn~~llI-~Afa~L~~ 296 (303)
.+.++.+|+..+.|++..++ +|++++.+
T Consensus 183 ~~~i~~~gg~~~~~~~~~~l~~a~~~~~~ 211 (357)
T PRK00726 183 KPTLLVVGGSQGARVLNEAVPEALALLPE 211 (357)
T ss_pred CeEEEEECCcHhHHHHHHHHHHHHHHhhh
Confidence 56788999999999876555 99988854
No 57
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=98.89 E-value=1.7e-07 Score=96.67 Aligned_cols=244 Identities=14% Similarity=0.078 Sum_probs=123.9
Q ss_pred CCCcEEEEEcCCCC--C--------CChHHHHHHHHHHHHH--------HhCCCC--eEEEEeccCCC-ChhHHHHhhhh
Q 022054 32 NRTTSVAFFHPNTN--D--------GGGGERVLWCAVKAIQ--------EESPDL--DCIVYTGDHDA-FPDSLLARAVD 90 (303)
Q Consensus 32 ~~~~rVa~~hp~l~--~--------~GGaErv~~~la~aL~--------~~~~~~--~~~v~t~~~~~-~~~~~~~~~~~ 90 (303)
+-.++|+++.+.-. . -||--.++.+++++|. +.|.++ +|.|+|...+. .+..+.+.++.
T Consensus 253 p~~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~~~~~~~~~~~e~ 332 (784)
T TIGR02470 253 PMVFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPDAEGTTCNQRLEK 332 (784)
T ss_pred CccceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCCcccccccccccc
Confidence 33479999877541 1 3888889999999864 555422 56788864311 11111111111
Q ss_pred ccCccccCCCeEEEccccc--e-eecccCCchhhhhHHHHHHHHH-HHHHh---ccCCcEEEeCCCcccccce--eeccC
Q 022054 91 RFGVELLHPPKVVHLYRRK--W-IEESTYPRFTMIGQSFGSVYLS-WEALC---KFTPLYYFDTSGYAFTYPL--ARIFG 161 (303)
Q Consensus 91 ~~~~~l~~~~~~i~L~~~~--~-~~~~~~~~~~l~~~~l~~~~~~-~~~l~---~~~pDv~i~t~~~~~~~pl--a~~~~ 161 (303)
.- ..+.++++.+.-+. . ..+...+++. +|..+..+... .+.+. ..+||++|...+.++..+. +...+
T Consensus 333 ~~---~~~~~~I~rvp~g~~~~~~~~~~i~k~~-l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~lg 408 (784)
T TIGR02470 333 VY---GTEHAWILRVPFRTENGIILRNWISRFE-IWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKLG 408 (784)
T ss_pred cc---CCCceEEEEecCCCCcccccccccCHHH-HHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhcC
Confidence 00 01222332222111 0 1111122232 23333322211 22222 3469999976655444442 33568
Q ss_pred CeEEEEeecCCcchHHHhhhhccccccCchhhhhhchhhhHhHHHHHHHHH-HHHHHhccCCcEEEEcCHHH----HHHH
Q 022054 162 CRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFS-WMYGLVGSCADLAMVNSSWT----QSHI 236 (303)
Q Consensus 162 ~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~-~l~~~~~~~ad~viaNS~~t----~~~i 236 (303)
.|.+...|...-. ++ +..+..+. .....|..-.. .....++..||.|||+|..- .+.+
T Consensus 409 VP~v~t~HsL~~~----K~-~~~g~~~~------------~~e~~~~~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v 471 (784)
T TIGR02470 409 VTQCTIAHALEKT----KY-PDSDIYWQ------------EFEDKYHFSCQFTADLIAMNAADFIITSTYQEIAGTKDSV 471 (784)
T ss_pred CCEEEECCcchhh----cc-cccccccc------------cchhHHHhhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhh
Confidence 8988888875410 10 00000000 00001100000 01235678899999999632 2233
Q ss_pred HH-----------HhCC-------CCCceEEcCCCCCCcccccCC-C---------------------------CCCCCC
Q 022054 237 EK-----------LWGI-------PDRIKRVYPPCDTSGLQVLPL-E---------------------------RSTEYP 270 (303)
Q Consensus 237 ~~-----------~~~~-------~~~~~VIYPPvd~~~~~~~~~-~---------------------------~~~~~~ 270 (303)
.+ +|++ +.++.||+|.+|++.|..... . .....+
T Consensus 472 ~qY~s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kp 551 (784)
T TIGR02470 472 GQYESHQAFTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKP 551 (784)
T ss_pred hhhhhcccccccceeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcchhhhccchhhHHHHhCCCCCCCCc
Confidence 31 2221 257799999999887752100 0 011247
Q ss_pred EEEEEcCcccccChHHHHHHHHHccc
Q 022054 271 AIISVAQFRPEKVRYKLISTRHILFN 296 (303)
Q Consensus 271 ~iLsvgRl~p~Kn~~llI~Afa~L~~ 296 (303)
.|+++||+.|+||++.+|+||+.+++
T Consensus 552 iIl~VGRL~~~KGid~LIeA~~~l~~ 577 (784)
T TIGR02470 552 IIFSMARLDRVKNLTGLVECYGRSPK 577 (784)
T ss_pred EEEEEeCCCccCCHHHHHHHHHHhHh
Confidence 89999999999999999999987653
No 58
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=98.89 E-value=1.9e-07 Score=89.62 Aligned_cols=87 Identities=8% Similarity=-0.114 Sum_probs=66.0
Q ss_pred HHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccCCC-C--CCCCCEEEEEcCcccccChH
Q 022054 210 FFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLE-R--STEYPAIISVAQFRPEKVRY 285 (303)
Q Consensus 210 ~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~-~~~~~VIYPPvd~~~~~~~~~~-~--~~~~~~iLsvgRl~p~Kn~~ 285 (303)
.+....+...+++|.+++.|+.+++.+++.++. +.++.||+|+||++.|...... . ....+.++++||+.++||++
T Consensus 161 ~~~~~e~~~~~~ad~vi~~S~~~~~~l~~~~~~~~~~v~vipngvd~~~f~~~~~~~~~~~~~~~~ilf~G~l~~~k~~~ 240 (397)
T TIGR03087 161 LLLAYERAIAARFDAATFVSRAEAELFRRLAPEAAGRITAFPNGVDADFFSPDRDYPNPYPPGKRVLVFTGAMDYWPNID 240 (397)
T ss_pred HHHHHHHHHHhhCCeEEEcCHHHHHHHHHhCCCCCCCeEEeecccchhhcCCCccccCCCCCCCcEEEEEEecCCccCHH
Confidence 344556677899999999999999999988764 5688999999999887532111 0 11246899999999999999
Q ss_pred HHH----HHHHHccc
Q 022054 286 KLI----STRHILFN 296 (303)
Q Consensus 286 llI----~Afa~L~~ 296 (303)
.++ +++..+.+
T Consensus 241 ~l~~~~~~~~~~l~~ 255 (397)
T TIGR03087 241 AVVWFAERVFPAVRA 255 (397)
T ss_pred HHHHHHHHHHHHHHH
Confidence 998 55655543
No 59
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=98.88 E-value=5e-08 Score=91.31 Aligned_cols=196 Identities=12% Similarity=0.099 Sum_probs=107.0
Q ss_pred CCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccceeecccCCchhhhhH
Q 022054 45 NDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQ 124 (303)
Q Consensus 45 ~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~~~~~~~~~~~l~~~ 124 (303)
++.||.++++.+++++|.+.++ ++.+.|....... .... ..++ ++..+..........+..+.-.+.
T Consensus 7 ~~~gG~~~~~~~la~~l~~~G~--ev~v~~~~~~~~~----~~~~-~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 73 (350)
T cd03785 7 GGTGGHIFPALALAEELRERGA--EVLFLGTKRGLEA----RLVP-KAGI------PLHTIPVGGLRRKGSLKKLKAPFK 73 (350)
T ss_pred cCchhhhhHHHHHHHHHHhCCC--EEEEEECCCcchh----hccc-ccCC------ceEEEEecCcCCCChHHHHHHHHH
Confidence 4679999999999999999865 5566665331110 0010 0111 222221100000000000111111
Q ss_pred HHHHHHHHHHHHhccCCcEEEeCCCcccccc-e-eeccCCeEEEEeecCCcchHHHhhhhccccccCchhhhhhchhhhH
Q 022054 125 SFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-L-ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQ 202 (303)
Q Consensus 125 ~l~~~~~~~~~l~~~~pDv~i~t~~~~~~~p-l-a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (303)
.+.......+.+++.+||+++.+++.++... + ++..+.|.+++.|... .+.
T Consensus 74 ~~~~~~~~~~~i~~~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~~~---------------------------~~~ 126 (350)
T cd03785 74 LLKGVLQARKILKKFKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNAV---------------------------PGL 126 (350)
T ss_pred HHHHHHHHHHHHHhcCCCEEEECCCCcchHHHHHHHHhCCCEEEEcCCCC---------------------------ccH
Confidence 1212222344567889999887654432211 1 2345778876655422 000
Q ss_pred hHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccC----CCCCCCCCEEEEEcCc
Q 022054 203 CKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLP----LERSTEYPAIISVAQF 278 (303)
Q Consensus 203 ~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~~~~----~~~~~~~~~iLsvgRl 278 (303)
. .++..+.+|.+++.|...++. +. ++++.+++||++.+.+...+ +.....+++++++|+.
T Consensus 127 ~-----------~~~~~~~~~~vi~~s~~~~~~----~~-~~~~~~i~n~v~~~~~~~~~~~~~~~~~~~~~~i~~~~g~ 190 (350)
T cd03785 127 A-----------NRLLARFADRVALSFPETAKY----FP-KDKAVVTGNPVREEILALDRERARLGLRPGKPTLLVFGGS 190 (350)
T ss_pred H-----------HHHHHHhhCEEEEcchhhhhc----CC-CCcEEEECCCCchHHhhhhhhHHhcCCCCCCeEEEEECCc
Confidence 0 112235689999999998876 22 47899999999977654211 1112224678899998
Q ss_pred ccccChH-HHHHHHHHccc
Q 022054 279 RPEKVRY-KLISTRHILFN 296 (303)
Q Consensus 279 ~p~Kn~~-llI~Afa~L~~ 296 (303)
.+.|+++ ++++|++.+.+
T Consensus 191 ~~~~~~~~~l~~a~~~l~~ 209 (350)
T cd03785 191 QGARAINEAVPEALAELLR 209 (350)
T ss_pred HhHHHHHHHHHHHHHHhhc
Confidence 8888875 55688888863
No 60
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.84 E-value=3.2e-08 Score=97.48 Aligned_cols=145 Identities=14% Similarity=0.069 Sum_probs=94.6
Q ss_pred cCCcEEEeCCCcccccc--e-eeccCCeEEEEeecCCcchHHHhhhhccccccCchhhhhhchhhhHhHHHHHHHHHHHH
Q 022054 139 FTPLYYFDTSGYAFTYP--L-ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMY 215 (303)
Q Consensus 139 ~~pDv~i~t~~~~~~~p--l-a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~l~ 215 (303)
.++|+++..+......+ + +...+.|++...|.-. ..+ +... ...........+..+.+++..+.
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~-~~e--~~~~----------~~~~~~~~~~~~~~~~~~~~~l~ 238 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIY-TRE--RKIE----------LLQADWEMSYFRRLWIRFFESLG 238 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCcc-HHH--HHHH----------HHhcccchHHHHHHHHHHHHHHH
Confidence 36788875432111111 1 2246889999999632 000 0000 00000012234555666677777
Q ss_pred HHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccCC-CCCCCCCEEEEEcCcccccChHHHHHHHHH
Q 022054 216 GLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPL-ERSTEYPAIISVAQFRPEKVRYKLISTRHI 293 (303)
Q Consensus 216 ~~~~~~ad~viaNS~~t~~~i~~~~~~-~~~~~VIYPPvd~~~~~~~~~-~~~~~~~~iLsvgRl~p~Kn~~llI~Afa~ 293 (303)
+.+++.||.|+++|+.+++...+ +|. ++++.||||++|.+.+...+. ........++++||+.|.|+++.+|+|++.
T Consensus 239 ~~~~~~ad~Ii~~s~~~~~~~~~-~g~~~~ki~vIpNgid~~~f~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~ 317 (475)
T cd03813 239 RLAYQAADRITTLYEGNRERQIE-DGADPEKIRVIPNGIDPERFAPARRARPEKEPPVVGLIGRVVPIKDIKTFIRAAAI 317 (475)
T ss_pred HHHHHhCCEEEecCHHHHHHHHH-cCCCHHHeEEeCCCcCHHHcCCccccccCCCCcEEEEEeccccccCHHHHHHHHHH
Confidence 78889999999999999987655 565 568999999999988863221 112235789999999999999999999999
Q ss_pred cccC
Q 022054 294 LFNL 297 (303)
Q Consensus 294 L~~~ 297 (303)
++++
T Consensus 318 l~~~ 321 (475)
T cd03813 318 VRKK 321 (475)
T ss_pred HHHh
Confidence 8765
No 61
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=98.63 E-value=6.1e-07 Score=83.85 Aligned_cols=193 Identities=13% Similarity=0.121 Sum_probs=102.4
Q ss_pred CCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccceeecccCCchhhhhH
Q 022054 45 NDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQ 124 (303)
Q Consensus 45 ~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~~~~~~~~~~~l~~~ 124 (303)
++-||.+....+++++|.+.+ +++.+++.+.... ..+.+..+.. +..+.............+...+.
T Consensus 8 g~~~g~~~~~~~La~~L~~~g--~eV~vv~~~~~~~-----~~~~~~~g~~------~~~i~~~~~~~~~~~~~l~~~~~ 74 (348)
T TIGR01133 8 GGTGGHIFPALAVAEELIKRG--VEVLWLGTKRGLE-----KRLVPKAGIE------FYFIPVGGLRRKGSFRLIKTPLK 74 (348)
T ss_pred CccHHHHhHHHHHHHHHHhCC--CEEEEEeCCCcch-----hcccccCCCc------eEEEeccCcCCCChHHHHHHHHH
Confidence 345677777789999999886 4556666532110 0111112222 22221111100000001111122
Q ss_pred HHHHHHHHHHHHhccCCcEEEeCCCcccccc-e-eeccCCeEEEEeecCCcchHHHhhhhccccccCchhhhhhchhhhH
Q 022054 125 SFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-L-ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQ 202 (303)
Q Consensus 125 ~l~~~~~~~~~l~~~~pDv~i~t~~~~~~~p-l-a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (303)
.+..+....+.+++.+||+++++++...... + ++..+.|++.+.|... .+.
T Consensus 75 ~~~~~~~l~~~i~~~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~~~~---------------------------~~~ 127 (348)
T TIGR01133 75 LLKAVFQARRILKKFKPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQNAV---------------------------PGL 127 (348)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcccHHHHHHHHHcCCCEEEECCCCC---------------------------ccH
Confidence 2223333445578889999998755432222 2 2345677764333111 000
Q ss_pred hHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCccccc----CCCCCCCCCEEEEEcCc
Q 022054 203 CKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVL----PLERSTEYPAIISVAQF 278 (303)
Q Consensus 203 ~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~~~----~~~~~~~~~~iLsvgRl 278 (303)
. .++..+.+|.+++.|+.+++.+ +..+++||++.+.+... .......++.++++|+.
T Consensus 128 ~-----------~~~~~~~~d~ii~~~~~~~~~~--------~~~~i~n~v~~~~~~~~~~~~~~~~~~~~~~i~~~gg~ 188 (348)
T TIGR01133 128 T-----------NKLLSRFAKKVLISFPGAKDHF--------EAVLVGNPVRQEIRSLPVPRERFGLREGKPTILVLGGS 188 (348)
T ss_pred H-----------HHHHHHHhCeeEECchhHhhcC--------CceEEcCCcCHHHhcccchhhhcCCCCCCeEEEEECCc
Confidence 0 1223366899999999887664 23789999986544211 00111225688899999
Q ss_pred ccccChH-HHHHHHHHccc
Q 022054 279 RPEKVRY-KLISTRHILFN 296 (303)
Q Consensus 279 ~p~Kn~~-llI~Afa~L~~ 296 (303)
.++|++. ++++|++++.+
T Consensus 189 ~~~~~~~~~l~~a~~~l~~ 207 (348)
T TIGR01133 189 QGAKILNELVPKALAKLAE 207 (348)
T ss_pred hhHHHHHHHHHHHHHHHhh
Confidence 9999975 46689988754
No 62
>PLN02939 transferase, transferring glycosyl groups
Probab=98.57 E-value=9.4e-06 Score=84.96 Aligned_cols=78 Identities=10% Similarity=0.055 Sum_probs=59.6
Q ss_pred ccCCcEEEEcCHHHHHHHHHHhC--------C-CCCceEEcCCCCCCcccccC---------------------------
Q 022054 219 GSCADLAMVNSSWTQSHIEKLWG--------I-PDRIKRVYPPCDTSGLQVLP--------------------------- 262 (303)
Q Consensus 219 ~~~ad~viaNS~~t~~~i~~~~~--------~-~~~~~VIYPPvd~~~~~~~~--------------------------- 262 (303)
+-.+|.|+++|...+++|...+| . +.++.+|+|.+|++.+....
T Consensus 691 Iv~AD~VtTVSptYA~EI~te~G~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkel 770 (977)
T PLN02939 691 IVYSNIVTTVSPTYAQEVRSEGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKAANKAALRKQL 770 (977)
T ss_pred HHhCCeeEeeeHHHHHHHHHHhccchHHHhccccCCceEEecceehhhcCCccccccccccChhhhhhhhhhhHHHHHHh
Confidence 34699999999999999987433 2 46789999999998764210
Q ss_pred -CCCC-CCCCEEEEEcCcccccChHHHHHHHHHccc
Q 022054 263 -LERS-TEYPAIISVAQFRPEKVRYKLISTRHILFN 296 (303)
Q Consensus 263 -~~~~-~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~ 296 (303)
.... ...+++++|||+.++|+++++++|+..+.+
T Consensus 771 GL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~ 806 (977)
T PLN02939 771 GLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE 806 (977)
T ss_pred CCCcccccceEEEEeecCCcccChHHHHHHHHHHhh
Confidence 0000 123789999999999999999999988754
No 63
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=98.55 E-value=8.8e-07 Score=83.54 Aligned_cols=134 Identities=16% Similarity=0.075 Sum_probs=87.0
Q ss_pred cCCcEEEeCCCcccccceee-ccCCeEEEEeecCCcchHHHhhhhccccccCchhhhhhchhhhHhHHHHHHHHHHHHHH
Q 022054 139 FTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGL 217 (303)
Q Consensus 139 ~~pDv~i~t~~~~~~~pla~-~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~l~~~ 217 (303)
.++|++|.+.......++.. ....+.+.++|....... ... ..+.++..|...+ .
T Consensus 98 ~~~diii~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~-----------~~~--------~~~~~~~~~~~~~-----~ 153 (372)
T cd04949 98 TKPDVFILDRPTLDGQALLNMKKAAKVVVVLHSNHVSDN-----------NDP--------VHSLINNFYEYVF-----E 153 (372)
T ss_pred CCCCEEEECCccccchhHHhccCCceEEEEEChHHhCCc-----------ccc--------cccccchhhHHHH-----h
Confidence 78998887655443332322 345677888997541100 000 0011222222222 1
Q ss_pred hccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCCCCCCCCCEEEEEcCcccccChHHHHHHHHHcccC
Q 022054 218 VGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 218 ~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~~~~~~~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~~ 297 (303)
..+++|.+++.|+.+++.+.+.++...++.+|+++++.+.+...+... ..+..++++||+.++|+++.+|+|++.+.++
T Consensus 154 ~~~~~d~ii~~s~~~~~~l~~~~~~~~~v~~ip~g~~~~~~~~~~~~~-~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~ 232 (372)
T cd04949 154 NLDKVDGVIVATEQQKQDLQKQFGNYNPIYTIPVGSIDPLKLPAQFKQ-RKPHKIITVARLAPEKQLDQLIKAFAKVVKQ 232 (372)
T ss_pred ChhhCCEEEEccHHHHHHHHHHhCCCCceEEEcccccChhhcccchhh-cCCCeEEEEEccCcccCHHHHHHHHHHHHHh
Confidence 247899999999999999999997523478999999877664211112 2257899999999999999999999998654
No 64
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=98.55 E-value=4.2e-07 Score=87.79 Aligned_cols=79 Identities=19% Similarity=0.171 Sum_probs=65.4
Q ss_pred hccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccCCCCCCCCCEEEEEcCcccccChHHHHHHHHHccc
Q 022054 218 VGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKVRYKLISTRHILFN 296 (303)
Q Consensus 218 ~~~~ad~viaNS~~t~~~i~~~~~~-~~~~~VIYPPvd~~~~~~~~~~~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~ 296 (303)
..+.+|.++++|+..++.+++.|+. ..++.|+|++++.+.+... .....+..++++||+.++||++.+|+|++.+.+
T Consensus 180 ~~~~~d~ii~~S~~~~~~l~~~~~~~~~ki~vi~~gv~~~~~~~~--~~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~ 257 (407)
T cd04946 180 LLSSLDAVFPCSEQGRNYLQKRYPAYKEKIKVSYLGVSDPGIISK--PSKDDTLRIVSCSYLVPVKRVDLIIKALAALAK 257 (407)
T ss_pred HHhcCCEEEECCHHHHHHHHHHCCCccccEEEEECCcccccccCC--CCCCCCEEEEEeeccccccCHHHHHHHHHHHHH
Confidence 4578999999999999999999986 6688999999988766422 122225789999999999999999999999876
Q ss_pred CC
Q 022054 297 LR 298 (303)
Q Consensus 297 ~~ 298 (303)
+.
T Consensus 258 ~~ 259 (407)
T cd04946 258 AR 259 (407)
T ss_pred hC
Confidence 53
No 65
>PLN00142 sucrose synthase
Probab=98.54 E-value=5.6e-07 Score=93.03 Aligned_cols=142 Identities=15% Similarity=0.040 Sum_probs=82.0
Q ss_pred cCCcEEEeCCCcccccce--eeccCCeEEEEeecCCcchHHHhhhhccccccCchhhhhhchhhhHhHHHHHHHH-HHHH
Q 022054 139 FTPLYYFDTSGYAFTYPL--ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFF-SWMY 215 (303)
Q Consensus 139 ~~pDv~i~t~~~~~~~pl--a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~-~~l~ 215 (303)
..||++++..+.++..+. +...+.|.+...|.-.-. ++. ..+..+.. ....|.-.- ....
T Consensus 407 ~~PDlIHaHYwdsg~vA~~La~~lgVP~v~T~HsL~k~----K~~-~~~~~~~~------------~e~~y~~~~r~~aE 469 (815)
T PLN00142 407 GKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKT----KYP-DSDIYWKK------------FDDKYHFSCQFTAD 469 (815)
T ss_pred CCCCEEEECCccHHHHHHHHHHHhCCCEEEEcccchhh----hcc-ccCCcccc------------cchhhhhhhchHHH
Confidence 459999977655544442 334689999888863300 110 00000000 000011000 0123
Q ss_pred HHhccCCcEEEEcCHHHHHHH----H--------------HHh-CC---CCCceEEcCCCCCCcccccC-----C-----
Q 022054 216 GLVGSCADLAMVNSSWTQSHI----E--------------KLW-GI---PDRIKRVYPPCDTSGLQVLP-----L----- 263 (303)
Q Consensus 216 ~~~~~~ad~viaNS~~t~~~i----~--------------~~~-~~---~~~~~VIYPPvd~~~~~~~~-----~----- 263 (303)
..++..||.|||+|..-...+ . +.. |+ ..++.||.|.+|.+.|.... .
T Consensus 470 ~~a~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l~n 549 (815)
T PLN00142 470 LIAMNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLHP 549 (815)
T ss_pred HHHHHhhhHHHhCcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHHhhcc
Confidence 456778999999996665322 1 111 11 24779999999988775110 0
Q ss_pred ----------------C--CCCCCCEEEEEcCcccccChHHHHHHHHHcccC
Q 022054 264 ----------------E--RSTEYPAIISVAQFRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 264 ----------------~--~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~~ 297 (303)
. .....++++++||+.++||++.+|+||+++++.
T Consensus 550 ~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l 601 (815)
T PLN00142 550 SIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRL 601 (815)
T ss_pred cchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHh
Confidence 0 012246899999999999999999999987543
No 66
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=98.44 E-value=3.4e-06 Score=83.88 Aligned_cols=138 Identities=9% Similarity=0.025 Sum_probs=83.9
Q ss_pred HHHhccCCcEEEeCCCcccccceee-ccCCeEEEEeecCCcchHHHhhhhccccccCchhhhhhchhhhHhHHHHHHHHH
Q 022054 134 EALCKFTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFS 212 (303)
Q Consensus 134 ~~l~~~~pDv~i~t~~~~~~~pla~-~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~ 212 (303)
+.|...++||+|..-......++.. ..++|.+..+|.-.++.. ..+ . ... ++...+.
T Consensus 205 ~~L~~~~~di~i~dr~~~~~~~~~~~~~~~~~v~~lH~~h~~~~-----------~~~-----~---~~~---~~~~~y~ 262 (500)
T TIGR02918 205 KQLNLTKKDIIILDRSTGIGQAVLENKGPAKLGVVVHAEHFSES-----------ATN-----E---TYI---LWNNYYE 262 (500)
T ss_pred HHHhCCCCCEEEEcCCcccchHHHhcCCCceEEEEEChhhhcCc-----------cCc-----c---hhH---HHHHHHH
Confidence 4455567998776544333323322 346888999997542110 000 0 000 1111121
Q ss_pred HHHHHhccCCcEEEEcCHHHHHHHHHHhCC----CCCceEEcCCCCCCcccccCCCCCCCCCEEEEEcCcccccChHHHH
Q 022054 213 WMYGLVGSCADLAMVNSSWTQSHIEKLWGI----PDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKVRYKLI 288 (303)
Q Consensus 213 ~l~~~~~~~ad~viaNS~~t~~~i~~~~~~----~~~~~VIYPPvd~~~~~~~~~~~~~~~~~iLsvgRl~p~Kn~~llI 288 (303)
+.+. .++.+|.+|+.|+..++.+.+.++. ..++.++++.++.+... +...+ ....++++||+.++|+++.+|
T Consensus 263 ~~~~-~~~~~D~iI~~S~~~~~~l~~~~~~~~~~~~ki~viP~g~~~~~~~--~~~~r-~~~~il~vGrl~~~Kg~~~li 338 (500)
T TIGR02918 263 YQFS-NADYIDFFITATDIQNQILKNQFKKYYNIEPRIYTIPVGSLDELQY--PEQER-KPFSIITASRLAKEKHIDWLV 338 (500)
T ss_pred HHHh-chhhCCEEEECCHHHHHHHHHHhhhhcCCCCcEEEEcCCCcccccC--ccccc-CCeEEEEEeccccccCHHHHH
Confidence 1222 2467999999999999999887642 34567777776543332 21222 245799999999999999999
Q ss_pred HHHHHcccC
Q 022054 289 STRHILFNL 297 (303)
Q Consensus 289 ~Afa~L~~~ 297 (303)
+|++.+.++
T Consensus 339 ~A~~~l~~~ 347 (500)
T TIGR02918 339 KAVVKAKKS 347 (500)
T ss_pred HHHHHHHhh
Confidence 999998654
No 67
>PRK14098 glycogen synthase; Provisional
Probab=98.43 E-value=1.1e-06 Score=87.03 Aligned_cols=83 Identities=18% Similarity=0.081 Sum_probs=63.2
Q ss_pred HHHhccCCcEEEEcCHHHHHHHHHH----hCC-------CCCceEEcCCCCCCcccccCC--------------------
Q 022054 215 YGLVGSCADLAMVNSSWTQSHIEKL----WGI-------PDRIKRVYPPCDTSGLQVLPL-------------------- 263 (303)
Q Consensus 215 ~~~~~~~ad~viaNS~~t~~~i~~~----~~~-------~~~~~VIYPPvd~~~~~~~~~-------------------- 263 (303)
.+..+..||.|+++|...+++|.+. +|+ +.++.+|+|.||++.+.....
T Consensus 214 lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~~~k~~~k~ 293 (489)
T PRK14098 214 LYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGKLENKK 293 (489)
T ss_pred HHHHHHhcCcceeeCHHHHHHhCcCCCCCcChHHHHHhcCCCeeEEeCCccccccCCcccccccccCCcchhhhHHHHHH
Confidence 3455678999999999999999862 232 368999999999987752100
Q ss_pred --------CCCCCCCEEEEEcCcccccChHHHHHHHHHcccC
Q 022054 264 --------ERSTEYPAIISVAQFRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 264 --------~~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~~ 297 (303)
......+.++++||+.++|+++++|+|++.+.+.
T Consensus 294 ~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~ 335 (489)
T PRK14098 294 ALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVEL 335 (489)
T ss_pred HHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhc
Confidence 0011246899999999999999999999998654
No 68
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=98.42 E-value=3.6e-06 Score=83.90 Aligned_cols=82 Identities=11% Similarity=0.036 Sum_probs=63.4
Q ss_pred HHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccC---------------C-----CC----CCCC
Q 022054 214 MYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLP---------------L-----ER----STEY 269 (303)
Q Consensus 214 l~~~~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~~~~---------------~-----~~----~~~~ 269 (303)
+.+.++..||.++|+|+.|+++++.+|+.+.+. ||+|.+|++.|.... . .+ ...+
T Consensus 219 iE~~aa~~Ad~fttVS~it~~E~~~Ll~~~pd~-ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~ 297 (590)
T cd03793 219 IERAAAHCAHVFTTVSEITAYEAEHLLKRKPDV-VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFDLDK 297 (590)
T ss_pred HHHHHHhhCCEEEECChHHHHHHHHHhCCCCCE-EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCCCCCC
Confidence 466778899999999999999999999973233 999999999875321 0 00 0113
Q ss_pred CEEEE-EcCccc-ccChHHHHHHHHHccc
Q 022054 270 PAIIS-VAQFRP-EKVRYKLISTRHILFN 296 (303)
Q Consensus 270 ~~iLs-vgRl~p-~Kn~~llI~Afa~L~~ 296 (303)
..+++ +||++. +|++|.+|+|+++|..
T Consensus 298 tli~f~~GR~e~~nKGiDvlIeAl~rLn~ 326 (590)
T cd03793 298 TLYFFTAGRYEFSNKGADMFLEALARLNY 326 (590)
T ss_pred eEEEEEeeccccccCCHHHHHHHHHHHHH
Confidence 45555 799999 9999999999998753
No 69
>PHA01630 putative group 1 glycosyl transferase
Probab=98.38 E-value=1.5e-06 Score=81.88 Aligned_cols=77 Identities=17% Similarity=0.126 Sum_probs=58.8
Q ss_pred ccCCcEEEEcCHHHHHHHHHHhC-CCCCceEEcCCCCCCcccccCCCCCCCCCE-EEEEcCcccccChHHHHHHHHHccc
Q 022054 219 GSCADLAMVNSSWTQSHIEKLWG-IPDRIKRVYPPCDTSGLQVLPLERSTEYPA-IISVAQFRPEKVRYKLISTRHILFN 296 (303)
Q Consensus 219 ~~~ad~viaNS~~t~~~i~~~~~-~~~~~~VIYPPvd~~~~~~~~~~~~~~~~~-iLsvgRl~p~Kn~~llI~Afa~L~~ 296 (303)
.+++|.++++|+++++.+.+..- .++++.||||+||++.+..... +. ..++ +.++||+.++||++.+|+|++.+.+
T Consensus 92 ~~~ad~ii~~S~~~~~~l~~~g~~~~~~i~vIpNGVd~~~f~~~~~-~~-~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~ 169 (331)
T PHA01630 92 NQPVDEIVVPSQWSKNAFYTSGLKIPQPIYVIPHNLNPRMFEYKPK-EK-PHPCVLAILPHSWDRKGGDIVVKIFHELQN 169 (331)
T ss_pred hccCCEEEECCHHHHHHHHHcCCCCCCCEEEECCCCCHHHcCCCcc-cc-CCCEEEEEeccccccCCHHHHHHHHHHHHh
Confidence 47899999999999999987631 1357899999999887753211 11 1344 4466788999999999999999876
Q ss_pred C
Q 022054 297 L 297 (303)
Q Consensus 297 ~ 297 (303)
+
T Consensus 170 ~ 170 (331)
T PHA01630 170 E 170 (331)
T ss_pred h
Confidence 4
No 70
>PLN02846 digalactosyldiacylglycerol synthase
Probab=98.37 E-value=1.4e-05 Score=78.48 Aligned_cols=69 Identities=14% Similarity=0.003 Sum_probs=45.5
Q ss_pred CcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccC--CC---CCCC--CCEEEEEcCcccccChHHHHHHHHHc
Q 022054 222 ADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLP--LE---RSTE--YPAIISVAQFRPEKVRYKLISTRHIL 294 (303)
Q Consensus 222 ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~~~~--~~---~~~~--~~~iLsvgRl~p~Kn~~llI~Afa~L 294 (303)
+|.+++.|..+++ +.+ +..+.-..||.+.|.... .. .... .+.++++||+.++||++.+|+|++.+
T Consensus 181 ~d~vi~pS~~~~~-l~~------~~i~~v~GVd~~~f~~~~~~~~~~~~~~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l 253 (462)
T PLN02846 181 CHKVIRLSAATQD-YPR------SIICNVHGVNPKFLEIGKLKLEQQKNGEQAFTKGAYYIGKMVWSKGYKELLKLLHKH 253 (462)
T ss_pred cCEEEccCHHHHH-Hhh------CEEecCceechhhcCCCcccHhhhcCCCCCcceEEEEEecCcccCCHHHHHHHHHHH
Confidence 8999999986655 432 111212577777664210 00 0111 23588999999999999999999988
Q ss_pred ccC
Q 022054 295 FNL 297 (303)
Q Consensus 295 ~~~ 297 (303)
.+.
T Consensus 254 ~~~ 256 (462)
T PLN02846 254 QKE 256 (462)
T ss_pred Hhh
Confidence 654
No 71
>PHA01633 putative glycosyl transferase group 1
Probab=98.28 E-value=2.9e-06 Score=80.09 Aligned_cols=78 Identities=10% Similarity=0.038 Sum_probs=58.1
Q ss_pred hccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccC---------CCCC-CCCCEEEEEcCcccccChHHH
Q 022054 218 VGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLP---------LERS-TEYPAIISVAQFRPEKVRYKL 287 (303)
Q Consensus 218 ~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~~~~---------~~~~-~~~~~iLsvgRl~p~Kn~~ll 287 (303)
.+.+.+.+||||++|++++++. |.+.+ .+||+.+|++.|.... +... .....++++||+.++||++.+
T Consensus 89 ~m~~~~~vIavS~~t~~~L~~~-G~~~~-i~I~~GVD~~~f~p~~~~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~L 166 (335)
T PHA01633 89 YLLQDVKFIPNSKFSAENLQEV-GLQVD-LPVFHGINFKIVENAEKLVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLM 166 (335)
T ss_pred HHhcCCEEEeCCHHHHHHHHHh-CCCCc-eeeeCCCChhhcCccchhhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHH
Confidence 3355679999999999999986 54334 4688999988775310 0000 124578899999999999999
Q ss_pred HHHHHHcccC
Q 022054 288 ISTRHILFNL 297 (303)
Q Consensus 288 I~Afa~L~~~ 297 (303)
|+|++.+.++
T Consensus 167 I~A~~~L~~~ 176 (335)
T PHA01633 167 LQVFNELNTK 176 (335)
T ss_pred HHHHHHHHHh
Confidence 9999998754
No 72
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=98.18 E-value=1.7e-05 Score=75.47 Aligned_cols=75 Identities=11% Similarity=0.049 Sum_probs=51.8
Q ss_pred ccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCccccc-------CCCCCCCCCE-EEEEcCcccccChHHHHH
Q 022054 219 GSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVL-------PLERSTEYPA-IISVAQFRPEKVRYKLIS 289 (303)
Q Consensus 219 ~~~ad~viaNS~~t~~~i~~~~~~-~~~~~VIYPPvd~~~~~~~-------~~~~~~~~~~-iLsvgRl~p~Kn~~llI~ 289 (303)
.+++|.+++.|+.+++.+.+ +|+ ++++.++..|++....... ...-....++ +++.|++...|+++.+++
T Consensus 145 ~~~ad~i~~~s~~~~~~l~~-~gi~~~ki~v~G~p~~~~f~~~~~~~~~~~~~~l~~~~~~il~~~G~~~~~k~~~~li~ 223 (380)
T PRK13609 145 HREVDRYFVATDHVKKVLVD-IGVPPEQVVETGIPIRSSFELKINPDIIYNKYQLCPNKKILLIMAGAHGVLGNVKELCQ 223 (380)
T ss_pred cCCCCEEEECCHHHHHHHHH-cCCChhHEEEECcccChHHcCcCCHHHHHHHcCCCCCCcEEEEEcCCCCCCcCHHHHHH
Confidence 47899999999999999988 476 5678888888864221110 0000111244 456689999999999999
Q ss_pred HHHHc
Q 022054 290 TRHIL 294 (303)
Q Consensus 290 Afa~L 294 (303)
++...
T Consensus 224 ~l~~~ 228 (380)
T PRK13609 224 SLMSV 228 (380)
T ss_pred HHhhC
Confidence 98754
No 73
>PLN02501 digalactosyldiacylglycerol synthase
Probab=98.17 E-value=2.7e-05 Score=79.10 Aligned_cols=136 Identities=13% Similarity=-0.052 Sum_probs=77.3
Q ss_pred HHHHhccCCcEEEeCC-Cccccc--ce--eeccCCeEEEEeecCCcchHHHhhhhccccccCchhhhhhchhhhHhHHHH
Q 022054 133 WEALCKFTPLYYFDTS-GYAFTY--PL--ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVY 207 (303)
Q Consensus 133 ~~~l~~~~pDv~i~t~-~~~~~~--pl--a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~y 207 (303)
.+.+..++|||+|-.. .+.... .. +...+ |++.-+|+.. . .| +.... .+.++.+.
T Consensus 427 ~~~L~~f~PDVVHLatP~~LGw~~~Glr~ArKl~-PVVasyHTny-~----eY-------------l~~y~-~g~L~~~l 486 (794)
T PLN02501 427 SQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNY-L----EY-------------IKREK-NGALQAFF 486 (794)
T ss_pred HHHhhccCCCEEEECCchhhccHHHHHHHHHHcC-CeEEEEeCCc-H----HH-------------HhHhc-chhHHHHH
Confidence 4557789999877442 222233 11 11234 7888888755 1 11 11111 12334433
Q ss_pred HHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccC-------CCCCCCCCEEEEEcCccc
Q 022054 208 YTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLP-------LERSTEYPAIISVAQFRP 280 (303)
Q Consensus 208 ~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~~~~-------~~~~~~~~~iLsvgRl~p 280 (303)
++...++..+.. +|.|++.|..+++ +.+ .-+..+ +.||++.|.... +.....++.++++|||.+
T Consensus 487 lk~l~~~v~r~h--cD~VIaPS~atq~-L~~-----~vI~nV-nGVDte~F~P~~r~~~~r~lgi~~~~kgiLfVGRLa~ 557 (794)
T PLN02501 487 VKHINNWVTRAY--CHKVLRLSAATQD-LPK-----SVICNV-HGVNPKFLKIGEKVAEERELGQQAFSKGAYFLGKMVW 557 (794)
T ss_pred HHHHHHHHHHhh--CCEEEcCCHHHHH-hcc-----cceeec-ccccccccCCcchhHHHHhcCCccccCceEEEEcccc
Confidence 333323333333 8999999988883 321 112222 599988775210 011111245899999999
Q ss_pred ccChHHHHHHHHHcccC
Q 022054 281 EKVRYKLISTRHILFNL 297 (303)
Q Consensus 281 ~Kn~~llI~Afa~L~~~ 297 (303)
+||++.+|+|++.+.++
T Consensus 558 EKGld~LLeAla~L~~~ 574 (794)
T PLN02501 558 AKGYRELIDLLAKHKNE 574 (794)
T ss_pred cCCHHHHHHHHHHHHhh
Confidence 99999999999987654
No 74
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=98.06 E-value=0.00032 Score=67.89 Aligned_cols=79 Identities=15% Similarity=0.122 Sum_probs=52.2
Q ss_pred HHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccC-------CC--CCCCCCEEEEEcCcccccC
Q 022054 214 MYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLP-------LE--RSTEYPAIISVAQFRPEKV 283 (303)
Q Consensus 214 l~~~~~~~ad~viaNS~~t~~~i~~~~~~-~~~~~VIYPPvd~~~~~~~~-------~~--~~~~~~~iLsvgRl~p~Kn 283 (303)
+.+...+.+|.|++.|+.+++.+.+. |. ++ +.|++|. +.+...... .. .....++++++|+. +|+
T Consensus 171 ~~r~~~~~~d~ii~~S~~~~~~l~~~-g~~~~-i~vi~n~-~~d~~~~~~~~~~~~~~r~~~~~~~~vil~~~~~--~~~ 245 (425)
T PRK05749 171 FYRLLFKNIDLVLAQSEEDAERFLAL-GAKNE-VTVTGNL-KFDIEVPPELAARAATLRRQLAPNRPVWIAASTH--EGE 245 (425)
T ss_pred HHHHHHHhCCEEEECCHHHHHHHHHc-CCCCC-cEecccc-cccCCCChhhHHHHHHHHHHhcCCCcEEEEeCCC--chH
Confidence 34455578999999999999999985 65 33 6677663 332221100 00 00124688888874 688
Q ss_pred hHHHHHHHHHcccC
Q 022054 284 RYKLISTRHILFNL 297 (303)
Q Consensus 284 ~~llI~Afa~L~~~ 297 (303)
.+.+|+||+.+.++
T Consensus 246 ~~~ll~A~~~l~~~ 259 (425)
T PRK05749 246 EELVLDAHRALLKQ 259 (425)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999987653
No 75
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=97.97 E-value=8.6e-06 Score=76.12 Aligned_cols=205 Identities=14% Similarity=0.100 Sum_probs=121.0
Q ss_pred CCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCcc-ccCCCeEEEccccceeecccCCchhhhhH
Q 022054 46 DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVE-LLHPPKVVHLYRRKWIEESTYPRFTMIGQ 124 (303)
Q Consensus 46 ~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~-l~~~~~~i~L~~~~~~~~~~~~~~~l~~~ 124 (303)
+.||.|--+..+.+.|-+.++ .+++.|--+. + +-|+. +.+..++..+.- ....+-+.+.+
T Consensus 13 ~~ggveshiy~lSq~li~lgh--kVvvithayg-~----------r~girylt~glkVyylp~------~v~~n~tT~pt 73 (426)
T KOG1111|consen 13 STGGVESHIYALSQCLIRLGH--KVVVITHAYG-N----------RVGIRYLTNGLKVYYLPA------VVGYNQTTFPT 73 (426)
T ss_pred CCCChhhhHHHhhcchhhcCC--eEEEEecccc-C----------ccceeeecCCceEEEEee------eeeecccchhh
Confidence 459999999999999988864 4566553220 1 11332 233334443321 11112233445
Q ss_pred HHHHHHHHHHHHhccCCcEEEeCCCcccccc--e--eeccCCeEEEEeecCCcchHHHhhhhccccccCchhhhhhchhh
Q 022054 125 SFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--L--ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWL 200 (303)
Q Consensus 125 ~l~~~~~~~~~l~~~~pDv~i~t~~~~~~~p--l--a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (303)
.+..+++.-..+.+++..+++..++.++..- + ++..|-+.++.-|+-. . +.. .
T Consensus 74 v~~~~Pllr~i~lrE~I~ivhghs~fS~lahe~l~hartMGlktVfTdHSlf------G--------fad---------~ 130 (426)
T KOG1111|consen 74 VFSDFPLLRPILLRERIEIVHGHSPFSYLAHEALMHARTMGLKTVFTDHSLF------G--------FAD---------I 130 (426)
T ss_pred hhccCcccchhhhhhceEEEecCChHHHHHHHHHHHHHhcCceEEEeccccc------c--------ccc---------h
Confidence 4544443333355678888885433221111 1 2334677788778622 0 000 0
Q ss_pred hHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccCCCCCCCC-CEEEEEcCc
Q 022054 201 SQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLERSTEY-PAIISVAQF 278 (303)
Q Consensus 201 ~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~-~~~~~VIYPPvd~~~~~~~~~~~~~~~-~~iLsvgRl 278 (303)
+ ......+.+.+....|.+|++|+..++...=.-.+ +.++.||+|.++++.|...+......+ -.++.+|||
T Consensus 131 ~------si~~n~ll~~sL~~id~~IcVshtskentvlr~~L~p~kvsvIPnAv~~~~f~P~~~~~~S~~i~~ivv~sRL 204 (426)
T KOG1111|consen 131 G------SILTNKLLPLSLANIDRIICVSHTSKENTVLRGALAPAKVSVIPNAVVTHTFTPDAADKPSADIITIVVASRL 204 (426)
T ss_pred h------hhhhcceeeeeecCCCcEEEEeecCCCceEEEeccCHhHeeeccceeeccccccCccccCCCCeeEEEEEeee
Confidence 0 01111234556778999999999888764433334 688999999999999973111111112 478999999
Q ss_pred ccccChHHHHHHHHHcccCC
Q 022054 279 RPEKVRYKLISTRHILFNLR 298 (303)
Q Consensus 279 ~p~Kn~~llI~Afa~L~~~~ 298 (303)
...|+.|+++++.....++.
T Consensus 205 vyrKGiDll~~iIp~vc~~~ 224 (426)
T KOG1111|consen 205 VYRKGIDLLLEIIPSVCDKH 224 (426)
T ss_pred eeccchHHHHHHHHHHHhcC
Confidence 99999999999998877653
No 76
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=97.97 E-value=0.00089 Score=57.93 Aligned_cols=174 Identities=13% Similarity=0.086 Sum_probs=92.3
Q ss_pred cEEEEEcCC--CCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccceee
Q 022054 35 TSVAFFHPN--TNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIE 112 (303)
Q Consensus 35 ~rVa~~hp~--l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~~~ 112 (303)
.+||++=-- -...||-|..+.+|+..+++. +.+|.||+...+.+. + ...+ ..++.+.+..
T Consensus 2 kkIaIiGtrGIPa~YGGfET~ve~L~~~l~~~--g~~v~Vyc~~~~~~~-----~-~~~y-----~gv~l~~i~~----- 63 (185)
T PF09314_consen 2 KKIAIIGTRGIPARYGGFETFVEELAPRLVSK--GIDVTVYCRSDYYPY-----K-EFEY-----NGVRLVYIPA----- 63 (185)
T ss_pred ceEEEEeCCCCCcccCcHHHHHHHHHHHHhcC--CceEEEEEccCCCCC-----C-Cccc-----CCeEEEEeCC-----
Confidence 356666321 124899999999999999886 566788876432211 0 1111 1222333221
Q ss_pred cccCCchhhhhHHHHHHHHHHHHHhc--cCCcEEE-eCCC-cccccceee-c--cCCeEEEEeecCCcchHHHhhhhccc
Q 022054 113 ESTYPRFTMIGQSFGSVYLSWEALCK--FTPLYYF-DTSG-YAFTYPLAR-I--FGCRVICYTHYPTISLDMISRVREGS 185 (303)
Q Consensus 113 ~~~~~~~~l~~~~l~~~~~~~~~l~~--~~pDv~i-~t~~-~~~~~pla~-~--~~~~~i~Y~H~P~~s~~~~~~~~~~~ 185 (303)
+...+.-++..-.+ ++..+....+. .+.|+++ -..+ .++..|+.+ + .+.+++.-.|-.. |+|
T Consensus 64 ~~~g~~~si~yd~~-sl~~al~~~~~~~~~~~ii~ilg~~~g~~~~~~~r~~~~~g~~v~vN~DGlE---------WkR- 132 (185)
T PF09314_consen 64 PKNGSAESIIYDFL-SLLHALRFIKQDKIKYDIILILGYGIGPFFLPFLRKLRKKGGKVVVNMDGLE---------WKR- 132 (185)
T ss_pred CCCCchHHHHHHHH-HHHHHHHHHhhccccCCEEEEEcCCccHHHHHHHHhhhhcCCcEEECCCcch---------hhh-
Confidence 11111222322222 22222222222 2466443 2222 233445433 2 2457777555544 433
Q ss_pred cccCchhhhhhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCC
Q 022054 186 SMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPC 253 (303)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPv 253 (303)
.++...-++.+.+..+.+.+.+|.+||-|...++.+++-|+ +.++++|....
T Consensus 133 ---------------~KW~~~~k~~lk~~E~~avk~ad~lIaDs~~I~~y~~~~y~-~~~s~~IaYGa 184 (185)
T PF09314_consen 133 ---------------AKWGRPAKKYLKFSEKLAVKYADRLIADSKGIQDYIKERYG-RKKSTFIAYGA 184 (185)
T ss_pred ---------------hhcCHHHHHHHHHHHHHHHHhCCEEEEcCHHHHHHHHHHcC-CCCcEEecCCC
Confidence 12222233334445778889999999999999999999997 35677776543
No 77
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=97.92 E-value=9.6e-05 Score=70.74 Aligned_cols=76 Identities=13% Similarity=0.031 Sum_probs=58.1
Q ss_pred hccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCccccc--------CCCCCCCCCEEEEEcCcccccChHHHH
Q 022054 218 VGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVL--------PLERSTEYPAIISVAQFRPEKVRYKLI 288 (303)
Q Consensus 218 ~~~~ad~viaNS~~t~~~i~~~~~~-~~~~~VIYPPvd~~~~~~~--------~~~~~~~~~~iLsvgRl~p~Kn~~llI 288 (303)
..+.+|.+++.|+.+++.+.+. |. ++++.|+.+|++.+..... .+.-....+.++.+||..+.|++..++
T Consensus 147 ~~~~~d~~~~~s~~~~~~l~~~-g~~~~ki~v~g~~v~~~f~~~~~~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li 225 (382)
T PLN02605 147 FHKGVTRCFCPSEEVAKRALKR-GLEPSQIRVYGLPIRPSFARAVRPKDELRRELGMDEDLPAVLLMGGGEGMGPLEETA 225 (382)
T ss_pred ccCCCCEEEECCHHHHHHHHHc-CCCHHHEEEECcccCHhhccCCCCHHHHHHHcCCCCCCcEEEEECCCcccccHHHHH
Confidence 3478999999999999999876 66 6778999999986533211 011112257899999999999999999
Q ss_pred HHHHHc
Q 022054 289 STRHIL 294 (303)
Q Consensus 289 ~Afa~L 294 (303)
+++..+
T Consensus 226 ~~l~~~ 231 (382)
T PLN02605 226 RALGDS 231 (382)
T ss_pred HHHHHh
Confidence 999864
No 78
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=97.69 E-value=0.00024 Score=68.27 Aligned_cols=73 Identities=16% Similarity=0.134 Sum_probs=51.6
Q ss_pred ccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccC-------CCCCCCCCE-EEEEcCcccccChHHHHH
Q 022054 219 GSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLP-------LERSTEYPA-IISVAQFRPEKVRYKLIS 289 (303)
Q Consensus 219 ~~~ad~viaNS~~t~~~i~~~~~~-~~~~~VIYPPvd~~~~~~~~-------~~~~~~~~~-iLsvgRl~p~Kn~~llI~ 289 (303)
.+.+|.+++.|+.+++.+.+. |+ ++++.|+.+|++.+.....+ ..-....+. +++.|++.+.|+++.+++
T Consensus 145 ~~~~d~~~v~s~~~~~~l~~~-gi~~~ki~v~GiPv~~~f~~~~~~~~~~~~~~l~~~~~~ilv~~G~lg~~k~~~~li~ 223 (391)
T PRK13608 145 TPYSTRYYVATKETKQDFIDV-GIDPSTVKVTGIPIDNKFETPIDQKQWLIDNNLDPDKQTILMSAGAFGVSKGFDTMIT 223 (391)
T ss_pred cCCCCEEEECCHHHHHHHHHc-CCCHHHEEEECeecChHhcccccHHHHHHHcCCCCCCCEEEEECCCcccchhHHHHHH
Confidence 378999999999999999874 76 56788888898743221100 000111344 457899999999999999
Q ss_pred HHH
Q 022054 290 TRH 292 (303)
Q Consensus 290 Afa 292 (303)
++.
T Consensus 224 ~~~ 226 (391)
T PRK13608 224 DIL 226 (391)
T ss_pred HHH
Confidence 864
No 79
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=97.67 E-value=0.00034 Score=67.31 Aligned_cols=195 Identities=12% Similarity=0.049 Sum_probs=108.9
Q ss_pred CCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHH-hhhhccCccccCCCeEEEccccceeecccCCchhhhhH
Q 022054 46 DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLA-RAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQ 124 (303)
Q Consensus 46 ~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~-~~~~~~~~~l~~~~~~i~L~~~~~~~~~~~~~~~l~~~ 124 (303)
++-||.-.-..++++|.+.+++..+ .+.+ .+.+.+ -++..|.... +.+..+ . ..+..++.
T Consensus 13 GgtsGhi~paal~~~l~~~~~~~~~---~g~g---g~~m~~~g~~~~~~~~~---l~v~G~-----~-----~~l~~~~~ 73 (385)
T TIGR00215 13 GEASGDILGAGLRQQLKEHYPNARF---IGVA---GPRMAAEGCEVLYSMEE---LSVMGL-----R-----EVLGRLGR 73 (385)
T ss_pred CCccHHHHHHHHHHHHHhcCCCcEE---EEEc---cHHHHhCcCccccChHH---hhhccH-----H-----HHHHHHHH
Confidence 5667777777999999988777542 2222 111211 1111121110 001111 0 01222233
Q ss_pred HHHHHHHHHHHHhccCCcEEEeCCCcccccce--e-eccCCeEEEEeecCCcchHHHhhhhccccccCchhhhhhchhhh
Q 022054 125 SFGSVYLSWEALCKFTPLYYFDTSGYAFTYPL--A-RIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLS 201 (303)
Q Consensus 125 ~l~~~~~~~~~l~~~~pDv~i~t~~~~~~~pl--a-~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (303)
.+..+..+.+.+++.+||+++...+..+...+ + +..+.|++.|+ .|. .+.|.+.
T Consensus 74 ~~~~~~~~~~~l~~~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i-~P~------~waw~~~---------------- 130 (385)
T TIGR00215 74 LLKIRKEVVQLAKQAKPDLLVGIDAPDFNLTKELKKKDPGIKIIYYI-SPQ------VWAWRKW---------------- 130 (385)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCccHHHHHHHhhCCCCEEEEe-CCc------HhhcCcc----------------
Confidence 33333344566888999987766443333223 2 24689998887 777 5555421
Q ss_pred HhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCccc--c-c-----CCCCCCCCCEEE
Q 022054 202 QCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQ--V-L-----PLERSTEYPAII 273 (303)
Q Consensus 202 ~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~--~-~-----~~~~~~~~~~iL 273 (303)
. -+...+.+|.+++.+.++++.+.+ +| .+..++.+|+..+... . . .+.-+...+.++
T Consensus 131 ~------------~r~l~~~~d~v~~~~~~e~~~~~~-~g--~~~~~vGnPv~~~~~~~~~~~~~~r~~lgl~~~~~~Il 195 (385)
T TIGR00215 131 R------------AKKIEKATDFLLAILPFEKAFYQK-KN--VPCRFVGHPLLDAIPLYKPDRKSAREKLGIDHNGETLA 195 (385)
T ss_pred h------------HHHHHHHHhHhhccCCCcHHHHHh-cC--CCEEEECCchhhhccccCCCHHHHHHHcCCCCCCCEEE
Confidence 0 111235689999999999998875 34 5777888998432211 0 0 011111245666
Q ss_pred EE--cCccc-ccChHHHHHHHHHcccC
Q 022054 274 SV--AQFRP-EKVRYKLISTRHILFNL 297 (303)
Q Consensus 274 sv--gRl~p-~Kn~~llI~Afa~L~~~ 297 (303)
.+ ||..+ +|+++.+++|++.+.++
T Consensus 196 vl~GSR~aei~k~~~~ll~a~~~l~~~ 222 (385)
T TIGR00215 196 LLPGSRGSEVEKLFPLFLKAAQLLEQQ 222 (385)
T ss_pred EECCCCHHHHHHhHHHHHHHHHHHHHh
Confidence 55 48887 89999999999988654
No 80
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=97.28 E-value=0.0018 Score=55.32 Aligned_cols=24 Identities=29% Similarity=0.246 Sum_probs=22.0
Q ss_pred EEcCcccccChHHHHHHHHHcccC
Q 022054 274 SVAQFRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 274 svgRl~p~Kn~~llI~Afa~L~~~ 297 (303)
++||+.++|+++.+++|+..++++
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~ 132 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKER 132 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHh
Confidence 889999999999999999998754
No 81
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=97.24 E-value=0.001 Score=65.56 Aligned_cols=55 Identities=16% Similarity=0.060 Sum_probs=41.4
Q ss_pred CCceEEcCCCCCCcccccCC------------CCCCCCCEEEEEcCcccccChHHHHHHHHHcccCC
Q 022054 244 DRIKRVYPPCDTSGLQVLPL------------ERSTEYPAIISVAQFRPEKVRYKLISTRHILFNLR 298 (303)
Q Consensus 244 ~~~~VIYPPvd~~~~~~~~~------------~~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~~~ 298 (303)
.++.|+++.||++.|..... ......+.++++||+.++||++.+|+||+++.++.
T Consensus 227 ~~i~vip~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~ 293 (460)
T cd03788 227 VRVGAFPIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERY 293 (460)
T ss_pred EEEEEEeCeEcHHHHHHHhcCchhHHHHHHHHHhcCCCEEEEEecCccccCCHHHHHHHHHHHHHhC
Confidence 35789999999988753100 00122578999999999999999999999876553
No 82
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=97.18 E-value=0.0042 Score=59.17 Aligned_cols=78 Identities=13% Similarity=-0.084 Sum_probs=59.3
Q ss_pred HHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCCC-------CCCCCCEEEEEcCcccccChHH
Q 022054 214 MYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE-------RSTEYPAIISVAQFRPEKVRYK 286 (303)
Q Consensus 214 l~~~~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~~~~~~-------~~~~~~~iLsvgRl~p~Kn~~l 286 (303)
.++..++++|.|++.|+..++.+++. + .++.+|+|.||.+.|...+.. ...+.+.++++|++.+++++++
T Consensus 146 ~e~~~~~~ad~vi~~S~~l~~~~~~~-~--~~i~~i~ngvd~~~f~~~~~~~~~~~~~~~~~~~~i~y~G~l~~~~d~~l 222 (373)
T cd04950 146 AERRLLKRADLVFTTSPSLYEAKRRL-N--PNVVLVPNGVDYEHFAAARDPPPPPADLAALPRPVIGYYGAIAEWLDLEL 222 (373)
T ss_pred HHHHHHHhCCEEEECCHHHHHHHhhC-C--CCEEEcccccCHHHhhcccccCCChhHHhcCCCCEEEEEeccccccCHHH
Confidence 35566689999999999999988775 4 689999999998887532111 0123578999999999999988
Q ss_pred HHHHHHHc
Q 022054 287 LISTRHIL 294 (303)
Q Consensus 287 lI~Afa~L 294 (303)
+.++.+..
T Consensus 223 l~~la~~~ 230 (373)
T cd04950 223 LEALAKAR 230 (373)
T ss_pred HHHHHHHC
Confidence 77665543
No 83
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=97.06 E-value=0.0044 Score=58.73 Aligned_cols=75 Identities=12% Similarity=0.059 Sum_probs=44.9
Q ss_pred cCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCccc---c--c--CCCCCCCCCEEEEE-c-CcccccC-hHHHHH
Q 022054 220 SCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQ---V--L--PLERSTEYPAIISV-A-QFRPEKV-RYKLIS 289 (303)
Q Consensus 220 ~~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~---~--~--~~~~~~~~~~iLsv-g-Rl~p~Kn-~~llI~ 289 (303)
+.+|.+++.|+.+++.+.+. | .++.++-+|+...... . . ...-....+.++.+ | |....|. .+.+++
T Consensus 133 ~~~d~i~~~~~~~~~~~~~~-g--~~~~~~G~p~~~~~~~~~~~~~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~ 209 (380)
T PRK00025 133 KATDHVLALFPFEAAFYDKL-G--VPVTFVGHPLADAIPLLPDRAAARARLGLDPDARVLALLPGSRGQEIKRLLPPFLK 209 (380)
T ss_pred HHHhhheeCCccCHHHHHhc-C--CCeEEECcCHHHhcccccChHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHH
Confidence 56799999999999988764 5 4566666776432111 0 0 01111113444433 3 6655544 789999
Q ss_pred HHHHcccC
Q 022054 290 TRHILFNL 297 (303)
Q Consensus 290 Afa~L~~~ 297 (303)
|++.+.++
T Consensus 210 a~~~l~~~ 217 (380)
T PRK00025 210 AAQLLQQR 217 (380)
T ss_pred HHHHHHHh
Confidence 99988654
No 84
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes. It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.
Probab=96.91 E-value=0.011 Score=50.02 Aligned_cols=33 Identities=15% Similarity=0.132 Sum_probs=24.1
Q ss_pred CCcEEEEcCHHHHHHHHHH----hCC-------------CCCceEEcCCC
Q 022054 221 CADLAMVNSSWTQSHIEKL----WGI-------------PDRIKRVYPPC 253 (303)
Q Consensus 221 ~ad~viaNS~~t~~~i~~~----~~~-------------~~~~~VIYPPv 253 (303)
-||.|+=||.|-++.+-+- .+. +.+..|+|||+
T Consensus 119 aAD~v~FNS~~nr~sFL~~~~~fL~~~PD~~p~~~~~~I~~Ks~VL~~pi 168 (168)
T PF12038_consen 119 AADRVVFNSAFNRDSFLDGIPSFLKRMPDHRPKGLVERIRAKSQVLPVPI 168 (168)
T ss_pred hceeeeecchhhHHHHHHHHHHHHHHCCCCCchhHHHHHhccCeecCCCC
Confidence 4999999999998875542 110 35788888885
No 85
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=96.88 E-value=0.0085 Score=59.06 Aligned_cols=54 Identities=11% Similarity=-0.032 Sum_probs=40.8
Q ss_pred CCceEEcCCCCCCcccccCCC-----------C-CCCCCEEEEEcCcccccChHHHHHHHHHcccC
Q 022054 244 DRIKRVYPPCDTSGLQVLPLE-----------R-STEYPAIISVAQFRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 244 ~~~~VIYPPvd~~~~~~~~~~-----------~-~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~~ 297 (303)
.++.++++.+|++.|...... + -...+.+++|||+.+.||++.+++||+++.++
T Consensus 222 ~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~ 287 (456)
T TIGR02400 222 VRVGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLLAFERFLEE 287 (456)
T ss_pred EEEEEecCcCCHHHHHHHhcChhHHHHHHHHHHHcCCCeEEEEccccccccCHHHHHHHHHHHHHh
Confidence 457899999999988531000 0 01246899999999999999999999997554
No 86
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=96.71 E-value=0.0017 Score=68.28 Aligned_cols=55 Identities=9% Similarity=-0.106 Sum_probs=41.3
Q ss_pred CCceEEcCCCCCCcccccCC-----------C-CCCCCCEEEEEcCcccccChHHHHHHHHHcccCC
Q 022054 244 DRIKRVYPPCDTSGLQVLPL-----------E-RSTEYPAIISVAQFRPEKVRYKLISTRHILFNLR 298 (303)
Q Consensus 244 ~~~~VIYPPvd~~~~~~~~~-----------~-~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~~~ 298 (303)
.++.|+++.||++.|..... . .....+++++|||+.+.||++.+|+||+++.+++
T Consensus 242 ~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~ 308 (797)
T PLN03063 242 TRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYLAFEKFLEEN 308 (797)
T ss_pred EEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhcCCCeEEEEecccccccCHHHHHHHHHHHHHhC
Confidence 46889999999887752100 0 0112579999999999999999999999975543
No 87
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=96.71 E-value=0.0077 Score=56.53 Aligned_cols=77 Identities=13% Similarity=0.078 Sum_probs=53.6
Q ss_pred cCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCC-CCCcccc--c--C-----CCCCCCCCEEEEEcCccc---ccChH
Q 022054 220 SCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPC-DTSGLQV--L--P-----LERSTEYPAIISVAQFRP---EKVRY 285 (303)
Q Consensus 220 ~~ad~viaNS~~t~~~i~~~~~~-~~~~~VIYPPv-d~~~~~~--~--~-----~~~~~~~~~iLsvgRl~p---~Kn~~ 285 (303)
+.+|.+++.|+..++.+.+. |. ++++.++++|+ |...+.. . . ......+.++++.||... +|+++
T Consensus 140 ~~ad~~~~~s~~~~~~l~~~-G~~~~kI~vign~v~d~~~~~~~~~~~~~~~~~~~~~~~~~vlv~~~r~~~~~~~k~~~ 218 (363)
T cd03786 140 KLSDLHFAPTEEARRNLLQE-GEPPERIFVVGNTMIDALLRLLELAKKELILELLGLLPKKYILVTLHRVENVDDGEQLE 218 (363)
T ss_pred HHhhhccCCCHHHHHHHHHc-CCCcccEEEECchHHHHHHHHHHhhccchhhhhcccCCCCEEEEEeCCccccCChHHHH
Confidence 45799999999999999875 66 67788999996 4322110 0 0 000111235568999875 79999
Q ss_pred HHHHHHHHcccC
Q 022054 286 KLISTRHILFNL 297 (303)
Q Consensus 286 llI~Afa~L~~~ 297 (303)
.+++|++.+.+.
T Consensus 219 ~l~~al~~l~~~ 230 (363)
T cd03786 219 EILEALAELAEE 230 (363)
T ss_pred HHHHHHHHHHhc
Confidence 999999988643
No 88
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=96.55 E-value=0.018 Score=55.70 Aligned_cols=215 Identities=15% Similarity=0.083 Sum_probs=114.4
Q ss_pred CCCChHHHHHHHHHHHHHHhCCCCeEEE--EeccCCCChhHHHHhhhhccCccccCCCeEEEccccceeecccCCchhhh
Q 022054 45 NDGGGGERVLWCAVKAIQEESPDLDCIV--YTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMI 122 (303)
Q Consensus 45 ~~~GGaErv~~~la~aL~~~~~~~~~~v--~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~~~~~~~~~~~l~ 122 (303)
.+|-|-+-..+.++++|.+..|++++.. |.+.+ ..+.++ ++...++ +..+..+.+........+.-+
T Consensus 4 snghged~~a~ai~~~l~~~~~~~~v~~~p~vG~~----~~~e~~-----~ip~~g~--~~~~~sgg~~~~~~~~~~~~~ 72 (396)
T TIGR03492 4 SNGHGEDLIAARIAKALLQLSPDLNLEALPLVGEG----RAYQNL-----GIPIIGP--TKELPSGGFSYQSLRGLLRDL 72 (396)
T ss_pred CCCchHHHHHHHHHHHHHhhCCCCCeEEeCcccCC----HHHhhC-----CCceeCC--CCCCCCCCccCCCHHHHHHHH
Confidence 4688999999999999999878887541 34332 111111 1111111 112222222222122222234
Q ss_pred hH-HHHHHHHHHHHHhcc--CCcEEEeCCCcccccce--eeccCCeEEEEe-ecCCcchHHHhhhhccccccCchhhhhh
Q 022054 123 GQ-SFGSVYLSWEALCKF--TPLYYFDTSGYAFTYPL--ARIFGCRVICYT-HYPTISLDMISRVREGSSMYNNNASIAQ 196 (303)
Q Consensus 123 ~~-~l~~~~~~~~~l~~~--~pDv~i~t~~~~~~~pl--a~~~~~~~i~Y~-H~P~~s~~~~~~~~~~~~~~~~~~~~~~ 196 (303)
++ .+......++.+++. +||+++.+.++. |+ +++.+.|.+++- |... +.|......
T Consensus 73 ~~gl~~~~~~~~~~~~~~~~~p~~v~~~Gg~v---~~~aA~~~~~p~~~~~~~esn-------~~~~~~~~~-------- 134 (396)
T TIGR03492 73 RAGLVGLTLGQWRALRKWAKKGDLIVAVGDIV---PLLFAWLSGKPYAFVGTAKSD-------YYWESGPRR-------- 134 (396)
T ss_pred HhhHHHHHHHHHHHHHHHhhcCCEEEEECcHH---HHHHHHHcCCCceEEEeeccc-------eeecCCCCC--------
Confidence 44 344444556667888 999999998865 53 567788876643 6544 111100000
Q ss_pred chhhhHhHHHHHHHHHH------HHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCCCCCCCCC
Q 022054 197 SNWLSQCKIVYYTFFSW------MYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYP 270 (303)
Q Consensus 197 ~~~~~~~k~~y~~~~~~------l~~~~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~~~~~~~~~~~~ 270 (303)
.....|.++-.. ..+...+.||.|.+.-..|++.+.+ .| .++.++=+|+-.+-.......-....+
T Consensus 135 -----~~~~~~~~~~G~~~~p~e~n~l~~~~a~~v~~~~~~t~~~l~~-~g--~k~~~vGnPv~d~l~~~~~~~l~~~~~ 206 (396)
T TIGR03492 135 -----SPSDEYHRLEGSLYLPWERWLMRSRRCLAVFVRDRLTARDLRR-QG--VRASYLGNPMMDGLEPPERKPLLTGRF 206 (396)
T ss_pred -----ccchhhhccCCCccCHHHHHHhhchhhCEEeCCCHHHHHHHHH-CC--CeEEEeCcCHHhcCccccccccCCCCC
Confidence 000111111000 1344568899999999999999986 34 577777788844322110001011123
Q ss_pred EEEEE--cC-cccccChHHHHHHHHHccc
Q 022054 271 AIISV--AQ-FRPEKVRYKLISTRHILFN 296 (303)
Q Consensus 271 ~iLsv--gR-l~p~Kn~~llI~Afa~L~~ 296 (303)
.++-+ +| =+-.++.+.+++|++.+.+
T Consensus 207 ~lllLpGSR~ae~~~~lp~~l~al~~L~~ 235 (396)
T TIGR03492 207 RIALLPGSRPPEAYRNLKLLLRALEALPD 235 (396)
T ss_pred EEEEECCCCHHHHHccHHHHHHHHHHHhh
Confidence 44433 33 2344788899999999854
No 89
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=96.37 E-value=0.075 Score=45.43 Aligned_cols=109 Identities=16% Similarity=0.204 Sum_probs=67.4
Q ss_pred HHHHHhc--cCCcEEEeCCCcccccceee-ccCCeEEEEeec---CCcchHHHhhhhccccccCchhhhhhchhhhHhHH
Q 022054 132 SWEALCK--FTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHY---PTISLDMISRVREGSSMYNNNASIAQSNWLSQCKI 205 (303)
Q Consensus 132 ~~~~l~~--~~pDv~i~t~~~~~~~pla~-~~~~~~i~Y~H~---P~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 205 (303)
+...|++ +.|||++...|+..++.++- .+++|.++||-+ +. ..| ..|+ +.... .....++
T Consensus 56 a~~~L~~~Gf~PDvI~~H~GWGe~Lflkdv~P~a~li~Y~E~~y~~~-g~d---------~~FD--pe~p~-~~~~~~~- 121 (171)
T PF12000_consen 56 AARQLRAQGFVPDVIIAHPGWGETLFLKDVFPDAPLIGYFEFYYRAS-GAD---------VGFD--PEFPP-SLDDRAR- 121 (171)
T ss_pred HHHHHHHcCCCCCEEEEcCCcchhhhHHHhCCCCcEEEEEEEEecCC-CCc---------CCCC--CCCCC-CHHHHHH-
Confidence 3344443 46899998888776666653 689999999954 33 111 0122 11100 0011111
Q ss_pred HHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcc
Q 022054 206 VYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGL 258 (303)
Q Consensus 206 ~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~ 258 (303)
.++.....-.....+|..++.++|=++..=..|. .++.||+=.||++.+
T Consensus 122 --~r~rN~~~l~~l~~~D~~isPT~wQ~~~fP~~~r--~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 122 --LRMRNAHNLLALEQADAGISPTRWQRSQFPAEFR--SKISVIHDGIDTDRF 170 (171)
T ss_pred --HHHHhHHHHHHHHhCCcCcCCCHHHHHhCCHHHH--cCcEEeecccchhhc
Confidence 1111111223446799999999999999888886 899999999998765
No 90
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.19 E-value=0.14 Score=48.29 Aligned_cols=219 Identities=16% Similarity=0.191 Sum_probs=124.3
Q ss_pred CcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccc---e
Q 022054 34 TTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRK---W 110 (303)
Q Consensus 34 ~~rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~---~ 110 (303)
+.+++++. ||..|-.-|... =|..|++.+.+++.+=|..+. +.+++++ ++.+++..+..-. .
T Consensus 12 k~ra~vvV--LGDvGRSPRMqY-HA~Sla~~gf~VdliGy~~s~--p~e~l~~----------hprI~ih~m~~l~~~~~ 76 (444)
T KOG2941|consen 12 KKRAIVVV--LGDVGRSPRMQY-HALSLAKLGFQVDLIGYVESI--PLEELLN----------HPRIRIHGMPNLPFLQG 76 (444)
T ss_pred cceEEEEE--ecccCCChHHHH-HHHHHHHcCCeEEEEEecCCC--ChHHHhc----------CCceEEEeCCCCcccCC
Confidence 44444443 455577888874 456788888777766565332 3333332 2233333332211 1
Q ss_pred eecccCCchhhhhHHHHHHHHHHHHHhccCCcEEEeCCCcccccce---ee----ccCCeEEEEeecCCcchHHHhhhhc
Q 022054 111 IEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPL---AR----IFGCRVICYTHYPTISLDMISRVRE 183 (303)
Q Consensus 111 ~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~pDv~i~t~~~~~~~pl---a~----~~~~~~i~Y~H~P~~s~~~~~~~~~ 183 (303)
.++..+..+..+||.+..+... +....+|+++-+..++ +|. .. +.+++.++=-|+-.-|.. ++. ..
T Consensus 77 ~p~~~~l~lKvf~Qfl~Ll~aL---~~~~~~~~ilvQNPP~--iPtliv~~~~~~l~~~KfiIDWHNy~Ysl~-l~~-~~ 149 (444)
T KOG2941|consen 77 GPRVLFLPLKVFWQFLSLLWAL---FVLRPPDIILVQNPPS--IPTLIVCVLYSILTGAKFIIDWHNYGYSLQ-LKL-KL 149 (444)
T ss_pred CchhhhhHHHHHHHHHHHHHHH---HhccCCcEEEEeCCCC--CchHHHHHHHHHHhcceEEEEehhhHHHHH-HHh-hc
Confidence 1222233445677766422222 2256788766554433 452 11 357787777776441201 110 00
Q ss_pred cccccCchhhhhhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEc--CCC---CCCc-
Q 022054 184 GSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVY--PPC---DTSG- 257 (303)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VIY--PPv---d~~~- 257 (303)
+ ....+-++..|..+..++.||.-+|+++..++++.+.||+ .+..|+| ||- +.+.
T Consensus 150 -----------------g-~~h~lV~l~~~~E~~fgk~a~~nLcVT~AMr~dL~qnWgi-~ra~v~YDrPps~~~~l~~~ 210 (444)
T KOG2941|consen 150 -----------------G-FQHPLVRLVRWLEKYFGKLADYNLCVTKAMREDLIQNWGI-NRAKVLYDRPPSKPTPLDEQ 210 (444)
T ss_pred -----------------C-CCCchHHHHHHHHHHhhcccccchhhHHHHHHHHHHhcCC-ceeEEEecCCCCCCCchhHH
Confidence 0 0012235556667888999999999999999999999996 4788999 662 1111
Q ss_pred ---cccc-----------CC-------------C------CCCCCCEEEEEcCcccccChHHHHHHHHH
Q 022054 258 ---LQVL-----------PL-------------E------RSTEYPAIISVAQFRPEKVRYKLISTRHI 293 (303)
Q Consensus 258 ---~~~~-----------~~-------------~------~~~~~~~iLsvgRl~p~Kn~~llI~Afa~ 293 (303)
|.+. +. . ...++..++|---..|..|+..+++|...
T Consensus 211 H~lf~~l~~d~~~f~ar~~q~~~~~~taf~~k~~s~~v~~~~~~pallvsSTswTpDEdf~ILL~AL~~ 279 (444)
T KOG2941|consen 211 HELFMKLAGDHSPFRAREPQDKALERTAFTKKDASGDVQLLPERPALLVSSTSWTPDEDFGILLEALVI 279 (444)
T ss_pred HHHHhhhccccchhhhcccccchhhhhhHhhhcccchhhhccCCCeEEEecCCCCCcccHHHHHHHHHh
Confidence 1000 00 0 01224577788889999999999999874
No 91
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=96.17 E-value=0.11 Score=41.73 Aligned_cols=126 Identities=17% Similarity=0.147 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccceeecccCCchhhhhHHHHHHH
Q 022054 51 ERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVY 130 (303)
Q Consensus 51 Erv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~~~~~~~~~~~l~~~~l~~~~ 130 (303)
+-.+.++++.|++.+ +++.+.+...+.. . .. ..+.+++..+... ... ....+. +.
T Consensus 10 ~~~~~~~~~~L~~~g--~~V~ii~~~~~~~--~----~~------~~~~i~~~~~~~~-----~k~-----~~~~~~-~~ 64 (139)
T PF13477_consen 10 STFIYNLAKELKKRG--YDVHIITPRNDYE--K----YE------IIEGIKVIRLPSP-----RKS-----PLNYIK-YF 64 (139)
T ss_pred HHHHHHHHHHHHHCC--CEEEEEEcCCCch--h----hh------HhCCeEEEEecCC-----CCc-----cHHHHH-HH
Confidence 457889999999875 5566766543211 0 00 1122233333211 000 111121 22
Q ss_pred HHHHHHhccCCcEEEeCCCcc-cccc-ee-eccC-CeEEEEeecCCcchHHHhhhhccccccCchhhhhhchhhhHhHHH
Q 022054 131 LSWEALCKFTPLYYFDTSGYA-FTYP-LA-RIFG-CRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIV 206 (303)
Q Consensus 131 ~~~~~l~~~~pDv~i~t~~~~-~~~p-la-~~~~-~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 206 (303)
...+.+++.+||+++...... ...+ ++ +..+ .|++...|..++ +... ...+
T Consensus 65 ~l~k~ik~~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg~~~--------------~~~~----------~~~~- 119 (139)
T PF13477_consen 65 RLRKIIKKEKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHGSDF--------------YNSS----------KKKK- 119 (139)
T ss_pred HHHHHhccCCCCEEEEecCChHHHHHHHHHHHcCCCCEEEEecCCee--------------ecCC----------chHH-
Confidence 345567889999877544332 2223 22 3456 889988886542 1100 0011
Q ss_pred HHHHHHHHHHHhccCCcEEEEcC
Q 022054 207 YYTFFSWMYGLVGSCADLAMVNS 229 (303)
Q Consensus 207 y~~~~~~l~~~~~~~ad~viaNS 229 (303)
+..++++.+.+++|.+++.|
T Consensus 120 ---~~~~~~~~~~k~~~~ii~~~ 139 (139)
T PF13477_consen 120 ---LKKFIIKFAFKRADKIIVQS 139 (139)
T ss_pred ---HHHHHHHHHHHhCCEEEEcC
Confidence 22334666778999999987
No 92
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=95.93 E-value=0.11 Score=48.99 Aligned_cols=76 Identities=13% Similarity=0.084 Sum_probs=51.0
Q ss_pred CCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCC-CCCcccc--c---CC--CCCCCCCEEEEEc-Cc-ccccChHHHHH
Q 022054 221 CADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPC-DTSGLQV--L---PL--ERSTEYPAIISVA-QF-RPEKVRYKLIS 289 (303)
Q Consensus 221 ~ad~viaNS~~t~~~i~~~~~~-~~~~~VIYPPv-d~~~~~~--~---~~--~~~~~~~~iLsvg-Rl-~p~Kn~~llI~ 289 (303)
.+|.+++.|+..++++.+. |. ++++.|+++|+ |...... . .. .....+++++..+ |. ...|+++.+++
T Consensus 141 ~ad~~~~~s~~~~~~l~~~-G~~~~~I~vign~~~d~~~~~~~~~~~~~~~~~~~~~~~~vl~~~hr~~~~~k~~~~ll~ 219 (365)
T TIGR00236 141 IADLHFAPTEQAKDNLLRE-NVKADSIFVTGNTVIDALLTNVEIAYSSPVLSEFGEDKRYILLTLHRRENVGEPLENIFK 219 (365)
T ss_pred HHHhccCCCHHHHHHHHHc-CCCcccEEEeCChHHHHHHHHHhhccchhHHHhcCCCCCEEEEecCchhhhhhHHHHHHH
Confidence 4799999999999999885 77 67899999997 3211100 0 00 0011135666544 54 35699999999
Q ss_pred HHHHcccC
Q 022054 290 TRHILFNL 297 (303)
Q Consensus 290 Afa~L~~~ 297 (303)
|+..+.++
T Consensus 220 a~~~l~~~ 227 (365)
T TIGR00236 220 AIREIVEE 227 (365)
T ss_pred HHHHHHHH
Confidence 99987543
No 93
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=95.55 E-value=0.045 Score=57.08 Aligned_cols=54 Identities=11% Similarity=0.039 Sum_probs=41.0
Q ss_pred CceEEcCCCCCCcccccC-----------C-CCCCCCCEEEEEcCcccccChHHHHHHHHHcccCC
Q 022054 245 RIKRVYPPCDTSGLQVLP-----------L-ERSTEYPAIISVAQFRPEKVRYKLISTRHILFNLR 298 (303)
Q Consensus 245 ~~~VIYPPvd~~~~~~~~-----------~-~~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~~~ 298 (303)
++.|+++.||++.|.... + ......+.+++|||+.++||++.+|+||+++.+++
T Consensus 229 ~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~ 294 (726)
T PRK14501 229 RVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFERFLEKN 294 (726)
T ss_pred EEEEEECeEcHHHHHHHhcCchHHHHHHHHHHHcCCCEEEEEecCcccccCHHHHHHHHHHHHHhC
Confidence 588999999999885310 0 00122468999999999999999999999875543
No 94
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=95.12 E-value=0.84 Score=43.36 Aligned_cols=128 Identities=14% Similarity=0.030 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHHhccCCcEEEeCCCcccccc-e-eeccCCeEEEEeecCCcchHHHhhhhccccccCchhhhhhchhhh
Q 022054 124 QSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-L-ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLS 201 (303)
Q Consensus 124 ~~l~~~~~~~~~l~~~~pDv~i~t~~~~~~~p-l-a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (303)
..+.....+.+.+++.+||+++.+.+++..-+ + +++.+.|++.+..+.. .+
T Consensus 75 ~~~~~~~~~~~i~~~~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n~~---------------------------~g 127 (352)
T PRK12446 75 LVMKGVMDAYVRIRKLKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESDMT---------------------------PG 127 (352)
T ss_pred HHHHHHHHHHHHHHhcCCCEEEecCchhhHHHHHHHHHcCCCEEEECCCCC---------------------------cc
Confidence 33334445566788999999998877653222 2 3466788755443311 01
Q ss_pred HhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCccccc------CCCCCCCCCEEEEE
Q 022054 202 QCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVL------PLERSTEYPAIISV 275 (303)
Q Consensus 202 ~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~~~------~~~~~~~~~~iLsv 275 (303)
... +...+.+|.+++.-..++ +.+. ++++.++=|||..+..... ...-....+.+|..
T Consensus 128 ~~n-----------r~~~~~a~~v~~~f~~~~----~~~~-~~k~~~tG~Pvr~~~~~~~~~~~~~~~~l~~~~~~iLv~ 191 (352)
T PRK12446 128 LAN-----------KIALRFASKIFVTFEEAA----KHLP-KEKVIYTGSPVREEVLKGNREKGLAFLGFSRKKPVITIM 191 (352)
T ss_pred HHH-----------HHHHHhhCEEEEEccchh----hhCC-CCCeEEECCcCCcccccccchHHHHhcCCCCCCcEEEEE
Confidence 111 112355788876543222 3333 2567777899976543210 00101124677776
Q ss_pred cCcccccCh-HHHHHHHHHc
Q 022054 276 AQFRPEKVR-YKLISTRHIL 294 (303)
Q Consensus 276 gRl~p~Kn~-~llI~Afa~L 294 (303)
|==.--+.+ +.+.++...+
T Consensus 192 GGS~Ga~~in~~~~~~l~~l 211 (352)
T PRK12446 192 GGSLGAKKINETVREALPEL 211 (352)
T ss_pred CCccchHHHHHHHHHHHHhh
Confidence 655555556 3344444444
No 95
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=94.54 E-value=0.16 Score=45.11 Aligned_cols=76 Identities=22% Similarity=0.148 Sum_probs=58.7
Q ss_pred CCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccc--cCCCCCCCCCEEEEEcCcccccChHHHHHHHHHcccC
Q 022054 221 CADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQV--LPLERSTEYPAIISVAQFRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 221 ~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~~--~~~~~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~~ 297 (303)
..+.+++.|....+.++..+. ..+..+++++++.+.+.. ..........+++++||+.++|+++.+++|++.+.+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~ 227 (381)
T COG0438 150 LADRVIAVSPALKELLEALGV-PNKIVVIPNGIDTEKFAPARIGLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKR 227 (381)
T ss_pred cccEEEECCHHHHHHHHHhCC-CCCceEecCCcCHHHcCccccCCCcccCceEEEEeeccChhcCHHHHHHHHHHhhhh
Confidence 589999999999888777775 236888889999887763 1111111025899999999999999999999998765
No 96
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=94.10 E-value=1.3 Score=40.66 Aligned_cols=213 Identities=15% Similarity=0.072 Sum_probs=95.9
Q ss_pred cEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCcc-ccCCCeEEEccccceeec
Q 022054 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVE-LLHPPKVVHLYRRKWIEE 113 (303)
Q Consensus 35 ~rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~-l~~~~~~i~L~~~~~~~~ 113 (303)
|||+|..... +.|=+-|.+ .++++| + + +++.+++... .. +.+ +..|... + +...+.. ..+.....
T Consensus 1 MkIl~~v~~~-G~GH~~R~~-~la~~L-r-g--~~v~~~~~~~--~~-~~~---~~~~~~~~~-~~~~~~~-~~~~~~~~ 66 (318)
T PF13528_consen 1 MKILFYVQGH-GLGHASRCL-ALARAL-R-G--HEVTFITSGP--AP-EFL---KPRFPVREI-PGLGPIQ-ENGRLDRW 66 (318)
T ss_pred CEEEEEeCCC-CcCHHHHHH-HHHHHH-c-c--CceEEEEcCC--cH-HHh---ccccCEEEc-cCceEec-cCCccchH
Confidence 6899998776 567777877 699999 3 4 4445555432 11 222 2122211 2 1112221 11111100
Q ss_pred -ccCCchhhhhHHHHHHHHHHHHHhccCCcEEEeCCCcccccceeeccCCeEEEEeecCCcchHHHhhhhccccccCchh
Q 022054 114 -STYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (303)
Q Consensus 114 -~~~~~~~l~~~~l~~~~~~~~~l~~~~pDv~i~t~~~~~~~pla~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~ 192 (303)
+..............+....+.+++.+||++|+...+. +.-.++..+.|.++..|.-.+.. ++.
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~pDlVIsD~~~~-~~~aa~~~giP~i~i~~~~~~~~------------~~~-- 131 (318)
T PF13528_consen 67 KTVRNNIRWLARLARRIRREIRWLREFRPDLVISDFYPL-AALAARRAGIPVIVISNQYWFLH------------PNF-- 131 (318)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEcChHH-HHHHHHhcCCCEEEEEehHHccc------------ccC--
Confidence 00000000001111122223446778999888764422 21123456899988887643110 000
Q ss_pred hhhhchhhhHhHHHHHHHHHHHHHHh-ccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCCCCCCCCCE
Q 022054 193 SIAQSNWLSQCKIVYYTFFSWMYGLV-GSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPA 271 (303)
Q Consensus 193 ~~~~~~~~~~~k~~y~~~~~~l~~~~-~~~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~~~~~~~~~~~~~ 271 (303)
.+ . ....+...+...+... ...++..+.-|-... .... .+..++.|.+..+.... .....+..
T Consensus 132 ~~------~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~----~~~~~~~p~~~~~~~~~---~~~~~~~i 195 (318)
T PF13528_consen 132 WL------P-WDQDFGRLIERYIDRYHFPPADRRLALSFYPP--LPPF----FRVPFVGPIIRPEIREL---PPEDEPKI 195 (318)
T ss_pred Cc------c-hhhhHHHHHHHhhhhccCCcccceecCCcccc--cccc----ccccccCchhccccccc---CCCCCCEE
Confidence 00 0 0001111112222222 456777777765511 1111 23333333343332221 11122467
Q ss_pred EEEEcCcccccChHHHHHHHHHccc
Q 022054 272 IISVAQFRPEKVRYKLISTRHILFN 296 (303)
Q Consensus 272 iLsvgRl~p~Kn~~llI~Afa~L~~ 296 (303)
++++|-.... .++++++.+.+
T Consensus 196 Lv~~gg~~~~----~~~~~l~~~~~ 216 (318)
T PF13528_consen 196 LVYFGGGGPG----DLIEALKALPD 216 (318)
T ss_pred EEEeCCCcHH----HHHHHHHhCCC
Confidence 7899988877 66788777653
No 97
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=93.69 E-value=2.9 Score=41.61 Aligned_cols=83 Identities=16% Similarity=0.056 Sum_probs=55.1
Q ss_pred HHhccCCcEEEEcCHHHHHHHHH-HhC-----C----CCCceEEcCCCCCCcccc------------c--C---------
Q 022054 216 GLVGSCADLAMVNSSWTQSHIEK-LWG-----I----PDRIKRVYPPCDTSGLQV------------L--P--------- 262 (303)
Q Consensus 216 ~~~~~~ad~viaNS~~t~~~i~~-~~~-----~----~~~~~VIYPPvd~~~~~~------------~--~--------- 262 (303)
+.....||.|.++|..=+++|.. .+| . ..+..-|.|.+|.+.... . +
T Consensus 203 K~gi~~ad~vttVSptYa~Ei~t~~~g~gl~g~l~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L 282 (487)
T COG0297 203 KGGLYYADAVTTVSPTYAGEIYTPEYGEGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVAL 282 (487)
T ss_pred hhhheeccEEEEECHHHHHhhccccccccchhhhhhccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHH
Confidence 34456899999999999999882 221 1 123455555554432210 0 0
Q ss_pred -----CCCCCCCCEEEEEcCcccccChHHHHHHHHHcccCC
Q 022054 263 -----LERSTEYPAIISVAQFRPEKVRYKLISTRHILFNLR 298 (303)
Q Consensus 263 -----~~~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~~~ 298 (303)
.+...+.|++.++||+..||.+|++++|...+-++.
T Consensus 283 ~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~ 323 (487)
T COG0297 283 QERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG 323 (487)
T ss_pred HHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC
Confidence 011123589999999999999999999998876654
No 98
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=93.32 E-value=1.9 Score=41.81 Aligned_cols=196 Identities=17% Similarity=0.123 Sum_probs=103.9
Q ss_pred EEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccceeecccC
Q 022054 37 VAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTY 116 (303)
Q Consensus 37 Va~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~~~~~~~ 116 (303)
..-||-- .=|--+.+.-|+++|.+.+|+..++ .|+..++.. +.+.+.|+.. +...+|..
T Consensus 51 ~vWiHaa---SVGEv~a~~pLv~~l~~~~P~~~il-vTt~T~Tg~----e~a~~~~~~~----v~h~YlP~--------- 109 (419)
T COG1519 51 LVWIHAA---SVGEVLAALPLVRALRERFPDLRIL-VTTMTPTGA----ERAAALFGDS----VIHQYLPL--------- 109 (419)
T ss_pred eEEEEec---chhHHHHHHHHHHHHHHhCCCCCEE-EEecCccHH----HHHHHHcCCC----eEEEecCc---------
Confidence 4455522 2467788889999999999999854 454332222 2233334432 22222211
Q ss_pred CchhhhhHHHHHHHHHHHHHhccCCc--EEEeCCCcccccceeeccCCeEEEEeecCCcchHHHhhhhccccccCchhhh
Q 022054 117 PRFTMIGQSFGSVYLSWEALCKFTPL--YYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASI 194 (303)
Q Consensus 117 ~~~~l~~~~l~~~~~~~~~l~~~~pD--v~i~t~~~~~~~pla~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~~~ 194 (303)
- .-....+-++..+|| |++.|--++|.+--+...++|.+. +.- -+|.. +|
T Consensus 110 ---D-------~~~~v~rFl~~~~P~l~Ii~EtElWPnli~e~~~~~~p~~L-vNa-RLS~r----------S~------ 161 (419)
T COG1519 110 ---D-------LPIAVRRFLRKWRPKLLIIMETELWPNLINELKRRGIPLVL-VNA-RLSDR----------SF------ 161 (419)
T ss_pred ---C-------chHHHHHHHHhcCCCEEEEEeccccHHHHHHHHHcCCCEEE-Eee-eechh----------hh------
Confidence 0 001123446678899 455655555444322223566544 111 11111 00
Q ss_pred hhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEc--------CCCCCCccccc--CCC
Q 022054 195 AQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVY--------PPCDTSGLQVL--PLE 264 (303)
Q Consensus 195 ~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VIY--------PPvd~~~~~~~--~~~ 264 (303)
..+.+.+.+++.+ .+.-|.|++-|+--++++.++-- .++.|.= +|++....... .+.
T Consensus 162 ---~~y~k~~~~~~~~--------~~~i~li~aQse~D~~Rf~~LGa--~~v~v~GNlKfd~~~~~~~~~~~~~~r~~l~ 228 (419)
T COG1519 162 ---ARYAKLKFLARLL--------FKNIDLILAQSEEDAQRFRSLGA--KPVVVTGNLKFDIEPPPQLAAELAALRRQLG 228 (419)
T ss_pred ---HHHHHHHHHHHHH--------HHhcceeeecCHHHHHHHHhcCC--cceEEecceeecCCCChhhHHHHHHHHHhcC
Confidence 0022233333333 37789999999999999998732 2232221 33332222110 122
Q ss_pred CCCCCCEEEEEcCcccccChHHHHHHHHHcccCC
Q 022054 265 RSTEYPAIISVAQFRPEKVRYKLISTRHILFNLR 298 (303)
Q Consensus 265 ~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~~~ 298 (303)
.. .++++..|. -+..-+.+++|++.|+++.
T Consensus 229 ~~--r~v~iaaST--H~GEeei~l~~~~~l~~~~ 258 (419)
T COG1519 229 GH--RPVWVAAST--HEGEEEIILDAHQALKKQF 258 (419)
T ss_pred CC--CceEEEecC--CCchHHHHHHHHHHHHhhC
Confidence 21 589999998 4445678999999988775
No 99
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=93.25 E-value=1.3 Score=44.88 Aligned_cols=80 Identities=13% Similarity=0.011 Sum_probs=54.9
Q ss_pred HHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCc-eEEcCCCCCCcccccC--------------------CCC-----CC
Q 022054 214 MYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRI-KRVYPPCDTSGLQVLP--------------------LER-----ST 267 (303)
Q Consensus 214 l~~~~~~~ad~viaNS~~t~~~i~~~~~~~~~~-~VIYPPvd~~~~~~~~--------------------~~~-----~~ 267 (303)
+.+.++..||.+=++|+-|+.+.+.+.+ +++ .|+.|..+++.+.... .-. ..
T Consensus 214 iEraaA~~AdvFTTVSeITa~Ea~~LL~--r~pDvV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~~~f~g~~dfd~d 291 (633)
T PF05693_consen 214 IERAAAHYADVFTTVSEITAKEAEHLLK--RKPDVVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVRGHFYGHYDFDLD 291 (633)
T ss_dssp HHHHHHHHSSEEEESSHHHHHHHHHHHS--S--SEE----B-GGGTSSTTHHHHHHHHHHHHHHHHHHHHSTT---S-GG
T ss_pred HHHHHHHhcCeeeehhhhHHHHHHHHhC--CCCCEEcCCCccccccccchHHHHHHHHHHHHHHHHHHHHhcccCCCCcc
Confidence 4677788999999999999999999998 555 6788999887664310 000 01
Q ss_pred CCCEEEEEcCcc-cccChHHHHHHHHHcc
Q 022054 268 EYPAIISVAQFR-PEKVRYKLISTRHILF 295 (303)
Q Consensus 268 ~~~~iLsvgRl~-p~Kn~~llI~Afa~L~ 295 (303)
+.-++.+.||++ .-|++|..|||.++|.
T Consensus 292 ~tl~~ftsGRYEf~NKG~D~fieAL~rLn 320 (633)
T PF05693_consen 292 KTLYFFTSGRYEFRNKGIDVFIEALARLN 320 (633)
T ss_dssp GEEEEEEESSS-TTTTTHHHHHHHHHHHH
T ss_pred ceEEEEeeeceeeecCCccHHHHHHHHHH
Confidence 124677999999 5699999999999974
No 100
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=91.97 E-value=1.4 Score=42.13 Aligned_cols=110 Identities=17% Similarity=0.159 Sum_probs=54.8
Q ss_pred CCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccceeecccCCchhhhhH
Q 022054 45 NDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQ 124 (303)
Q Consensus 45 ~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~~~~~~~~~~~l~~~ 124 (303)
++.||==-....++++|.+.+.+ ++.+.-+.. .. ...+....+.+ +..+..+.+.....+..+...+.
T Consensus 8 gGTGGHv~pAlAl~~~l~~~g~~-~v~~~~~~~--~~---e~~l~~~~~~~------~~~I~~~~~~~~~~~~~~~~~~~ 75 (357)
T COG0707 8 GGTGGHVFPALALAEELAKRGWE-QVIVLGTGD--GL---EAFLVKQYGIE------FELIPSGGLRRKGSLKLLKAPFK 75 (357)
T ss_pred CCCccchhHHHHHHHHHHhhCcc-EEEEecccc--cc---eeeeccccCce------EEEEecccccccCcHHHHHHHHH
Confidence 45566667778888999998776 544331211 11 01111111221 22222222222111111222233
Q ss_pred HHHHHHHHHHHHhccCCcEEEeCCCcccccc-ee-eccCCeEEE
Q 022054 125 SFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-LA-RIFGCRVIC 166 (303)
Q Consensus 125 ~l~~~~~~~~~l~~~~pDv~i~t~~~~~~~p-la-~~~~~~~i~ 166 (303)
.+....-+.+.+++.+||+++++.++...-+ ++ +..+.|+++
T Consensus 76 ~~~~~~~a~~il~~~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~i 119 (357)
T COG0707 76 LLKGVLQARKILKKLKPDVVIGTGGYVSGPVGIAAKLLGIPVII 119 (357)
T ss_pred HHHHHHHHHHHHHHcCCCEEEecCCccccHHHHHHHhCCCCEEE
Confidence 3334444566689999999999988754433 23 345666544
No 101
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=90.11 E-value=1.6 Score=43.45 Aligned_cols=55 Identities=11% Similarity=0.073 Sum_probs=40.8
Q ss_pred CceEEcCCCCCCccccc---C--------CCC-CCCCCEEEEEcCcccccChHHHHHHHHHcccCCC
Q 022054 245 RIKRVYPPCDTSGLQVL---P--------LER-STEYPAIISVAQFRPEKVRYKLISTRHILFNLRH 299 (303)
Q Consensus 245 ~~~VIYPPvd~~~~~~~---~--------~~~-~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~~~~ 299 (303)
.+.+++..||++.|... + ..+ -+....|++|+|+.+.|+++..++||.++-++++
T Consensus 249 ~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~P 315 (487)
T TIGR02398 249 KLGAHPVGTDPERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERLLERRP 315 (487)
T ss_pred EEEEEECEecHHHHHHHhcCchHHHHHHHHHHHcCCceEEEEecccccccCHHHHHHHHHHHHHhCc
Confidence 46788888898888532 1 000 0235799999999999999999999999755543
No 102
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=90.00 E-value=1.6 Score=39.30 Aligned_cols=34 Identities=24% Similarity=0.188 Sum_probs=24.4
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccC
Q 022054 41 HPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDH 77 (303)
Q Consensus 41 hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~ 77 (303)
.|+. .-||-.-|+-.|.++|++.+. ++.+.+..+
T Consensus 10 ~P~~-k~GGLgdv~~~L~kaL~~~G~--~V~Vi~P~y 43 (245)
T PF08323_consen 10 APFA-KVGGLGDVVGSLPKALAKQGH--DVRVIMPKY 43 (245)
T ss_dssp TTTB--SSHHHHHHHHHHHHHHHTT---EEEEEEE-T
T ss_pred Cccc-ccCcHhHHHHHHHHHHHhcCC--eEEEEEccc
Confidence 3444 469999999999999999874 556666543
No 103
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=88.75 E-value=1.3 Score=37.39 Aligned_cols=34 Identities=26% Similarity=0.308 Sum_probs=28.6
Q ss_pred ccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCC
Q 022054 219 GSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPC 253 (303)
Q Consensus 219 ~~~ad~viaNS~~t~~~i~~~~~~-~~~~~VIYPPv 253 (303)
-+.+|..++-|+.+++++.+ .|+ ++++.|.=.||
T Consensus 135 ~~~~D~y~Vase~~~~~l~~-~Gi~~~~I~vtGiPV 169 (169)
T PF06925_consen 135 HPGVDRYFVASEEVKEELIE-RGIPPERIHVTGIPV 169 (169)
T ss_pred cCCCCEEEECCHHHHHHHHH-cCCChhHEEEeCccC
Confidence 37799999999999999999 687 67787766664
No 104
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=88.65 E-value=6.3 Score=33.55 Aligned_cols=34 Identities=18% Similarity=0.157 Sum_probs=23.9
Q ss_pred hhHHHHHHHHHHHHHhccCCcEEEeCCCcccccce
Q 022054 122 IGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPL 156 (303)
Q Consensus 122 ~~~~l~~~~~~~~~l~~~~pDv~i~t~~~~~~~pl 156 (303)
.+..+.+++.+++.+.+.+||+++++ |+..++|+
T Consensus 74 ~~~~l~~~~~~~~il~r~rPdvii~n-Gpg~~vp~ 107 (170)
T PF08660_consen 74 IFTTLRAFLQSLRILRRERPDVIISN-GPGTCVPV 107 (170)
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEc-CCceeeHH
Confidence 34444455556777788999999987 66677774
No 105
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=88.43 E-value=0.87 Score=45.72 Aligned_cols=75 Identities=16% Similarity=0.069 Sum_probs=51.9
Q ss_pred ccCCcEEEEcCHHHHHHHHHHhCC-CCCceE-EcCCCCCCcccccCCCCCCCCCEEEEEc--CcccccChHHHHHHHHHc
Q 022054 219 GSCADLAMVNSSWTQSHIEKLWGI-PDRIKR-VYPPCDTSGLQVLPLERSTEYPAIISVA--QFRPEKVRYKLISTRHIL 294 (303)
Q Consensus 219 ~~~ad~viaNS~~t~~~i~~~~~~-~~~~~V-IYPPvd~~~~~~~~~~~~~~~~~iLsvg--Rl~p~Kn~~llI~Afa~L 294 (303)
...+|.+|+-+.-.++++++.++- +....| .=||-++... .+.+++. ..-+++++ |+ |+|..+.+|+|+..+
T Consensus 270 ~~~~d~iIv~T~~q~~~l~~~~~~~~~~~~v~~Ip~~~~~~~--~~~s~r~-~~~~I~v~idrL-~ek~~~~~I~av~~~ 345 (519)
T TIGR03713 270 LSRADLIIVDREDIERLLEENYRENYVEFDISRITPFDTRLR--LGQSQQL-YETEIGFWIDGL-SDEELQQILQQLLQY 345 (519)
T ss_pred hhhcCeEEEcCHHHHHHHHHHhhhcccCCcceeeCccceEEe--cChhhcc-cceEEEEEcCCC-ChHHHHHHHHHHHHH
Confidence 356899999998889999888862 111222 2367776222 1233332 46788889 99 999999999999987
Q ss_pred ccC
Q 022054 295 FNL 297 (303)
Q Consensus 295 ~~~ 297 (303)
..+
T Consensus 346 ~~~ 348 (519)
T TIGR03713 346 ILK 348 (519)
T ss_pred Hhh
Confidence 554
No 106
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=87.36 E-value=1.8 Score=40.57 Aligned_cols=63 Identities=14% Similarity=0.024 Sum_probs=38.6
Q ss_pred HHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccCCCCCCCCCEEEEEcCcccc
Q 022054 216 GLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPE 281 (303)
Q Consensus 216 ~~~~~~ad~viaNS~~t~~~i~~~~~~-~~~~~VIYPPvd~~~~~~~~~~~~~~~~~iLsvgRl~p~ 281 (303)
...++++|.+|+.|+.+++.+++. |. ..++.++ |..+...... .......++.++++||+...
T Consensus 118 ~~~~~~aD~iI~~S~~~~~~l~~~-g~~~~~i~~~-~~~~~~~~~~-~~~~~~~~~~i~yaG~l~k~ 181 (333)
T PRK09814 118 IDMLNLADVLIVHSKKMKDRLVEE-GLTTDKIIVQ-GIFDYLNDIE-LVKTPSFQKKINFAGNLEKS 181 (333)
T ss_pred HHHHHhCCEEEECCHHHHHHHHHc-CCCcCceEec-cccccccccc-ccccccCCceEEEecChhhc
Confidence 445578999999999999999875 65 3445443 3333211110 11111224689999999943
No 107
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=86.98 E-value=4.8 Score=38.13 Aligned_cols=141 Identities=13% Similarity=0.222 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccceeecccCCchhhhhHHHHHHHH
Q 022054 52 RVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYL 131 (303)
Q Consensus 52 rv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~~~~~~~~~~~l~~~~l~~~~~ 131 (303)
.+.-.+++.|.+.| +++.+.+.+. ++. .++-+.+|++ .+.++... .+. ...+.........
T Consensus 14 hfFk~~I~eL~~~G--heV~it~R~~----~~~-~~LL~~yg~~------y~~iG~~g---~~~---~~Kl~~~~~R~~~ 74 (335)
T PF04007_consen 14 HFFKNIIRELEKRG--HEVLITARDK----DET-EELLDLYGID------YIVIGKHG---DSL---YGKLLESIERQYK 74 (335)
T ss_pred HHHHHHHHHHHhCC--CEEEEEEecc----chH-HHHHHHcCCC------eEEEcCCC---CCH---HHHHHHHHHHHHH
Confidence 45667889998875 4555555433 222 2333356654 23333200 000 1111222223333
Q ss_pred HHHHHhccCCcEEEeCCCcccccc-eeeccCCeEEEEeecCCcchHHHhhhhccccccCchhhhhhchhhhHhHHHHHHH
Q 022054 132 SWEALCKFTPLYYFDTSGYAFTYP-LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTF 210 (303)
Q Consensus 132 ~~~~l~~~~pDv~i~t~~~~~~~p-la~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~ 210 (303)
+.+.+++.+||++++..+.. .+ ++...|.|+|.++.++. + .. .
T Consensus 75 l~~~~~~~~pDv~is~~s~~--a~~va~~lgiP~I~f~D~e~-a-----~~-------~--------------------- 118 (335)
T PF04007_consen 75 LLKLIKKFKPDVAISFGSPE--AARVAFGLGIPSIVFNDTEH-A-----IA-------Q--------------------- 118 (335)
T ss_pred HHHHHHhhCCCEEEecCcHH--HHHHHHHhCCCeEEEecCch-h-----hc-------c---------------------
Confidence 45667788999999654422 33 44567899999998866 0 00 0
Q ss_pred HHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEE-cCCCC
Q 022054 211 FSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRV-YPPCD 254 (303)
Q Consensus 211 ~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VI-YPPvd 254 (303)
-+.+.+.||.+++.+-.-.+..+++ | .+-+|. ||.++
T Consensus 119 ----~~Lt~Pla~~i~~P~~~~~~~~~~~-G--~~~~i~~y~G~~ 156 (335)
T PF04007_consen 119 ----NRLTLPLADVIITPEAIPKEFLKRF-G--AKNQIRTYNGYK 156 (335)
T ss_pred ----ceeehhcCCeeECCcccCHHHHHhc-C--CcCCEEEECCee
Confidence 1123367899998887766655554 5 233455 76654
No 108
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=85.55 E-value=7.3 Score=33.56 Aligned_cols=37 Identities=19% Similarity=0.247 Sum_probs=25.3
Q ss_pred HHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEE
Q 022054 213 WMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRV 249 (303)
Q Consensus 213 ~l~~~~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VI 249 (303)
.+++...+.-|.|+|.|+..++++.++-..++++.|.
T Consensus 141 ~~~r~~l~~f~~i~aqs~~da~r~~~lG~~~~~v~v~ 177 (186)
T PF04413_consen 141 FLFRPLLSRFDRILAQSEADAERFRKLGAPPERVHVT 177 (186)
T ss_dssp HHHHHHGGG-SEEEESSHHHHHHHHTTT-S--SEEE-
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHHHcCCCcceEEEe
Confidence 3455566888999999999999999884324566664
No 109
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=84.60 E-value=10 Score=36.29 Aligned_cols=46 Identities=15% Similarity=0.245 Sum_probs=34.3
Q ss_pred cCCCCcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEecc
Q 022054 30 RRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (303)
Q Consensus 30 ~~~~~~rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~ 76 (303)
++.+.+||.|.-.++.+.|=- |-+..+|++|++.+++.++.+.|+-
T Consensus 5 ~~~~~~Ri~~Yshd~~GlGHl-rR~~~Ia~aLv~d~~~~~Il~IsG~ 50 (400)
T COG4671 5 EASKRPRILFYSHDLLGLGHL-RRALRIAHALVEDYLGFDILIISGG 50 (400)
T ss_pred chhccceEEEEehhhccchHH-HHHHHHHHHHhhcccCceEEEEeCC
Confidence 355667999877777555554 4455899999999888888887764
No 110
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=78.61 E-value=8 Score=41.63 Aligned_cols=29 Identities=10% Similarity=-0.019 Sum_probs=25.8
Q ss_pred CCEEEEEcCcccccChHHHHHHHHHcccC
Q 022054 269 YPAIISVAQFRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 269 ~~~iLsvgRl~p~Kn~~llI~Afa~L~~~ 297 (303)
..+||+|+|+.+.|+++..++||+++-++
T Consensus 363 ~kiIlgVDRLD~~KGI~~kL~AfE~fL~~ 391 (934)
T PLN03064 363 RKVMLGVDRLDMIKGIPQKILAFEKFLEE 391 (934)
T ss_pred ceEEEEeeccccccCHHHHHHHHHHHHHh
Confidence 46999999999999999999999985444
No 111
>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes. It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.
Probab=68.30 E-value=21 Score=32.68 Aligned_cols=87 Identities=18% Similarity=0.174 Sum_probs=54.3
Q ss_pred CCcEEEeCCCcccccc-e-ee-ccCCeEEEEeecCCcchHHHhhhhccccccCchhhhhhchh---hhHhHHHHHHHHHH
Q 022054 140 TPLYYFDTSGYAFTYP-L-AR-IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNW---LSQCKIVYYTFFSW 213 (303)
Q Consensus 140 ~pDv~i~t~~~~~~~p-l-a~-~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~k~~y~~~~~~ 213 (303)
++||+++.++...+++ . +. ..++|.+...|.--. ++|.. .+.++.+ ...+|.++.++|..
T Consensus 172 ~advyHsvstGyAgl~g~~~k~~~g~P~lLTEHGIY~--------RER~~------ei~~a~w~~~~~~~r~~wi~~f~~ 237 (268)
T PF11997_consen 172 KADVYHSVSTGYAGLLGALAKYRYGRPFLLTEHGIYT--------REREI------EILQADWIWESPYVRDLWIRFFES 237 (268)
T ss_pred CCCEEecCCccHHHHHHHHHHHHhCCCEEEecCCccH--------HHHHH------HHHhcccccchHHHHHHHHHHHHH
Confidence 4689997764322333 2 22 568999999997331 11110 1112222 24567777788888
Q ss_pred HHHHhccCCcEEEEcCHHHHHHHHHHhC
Q 022054 214 MYGLVGSCADLAMVNSSWTQSHIEKLWG 241 (303)
Q Consensus 214 l~~~~~~~ad~viaNS~~t~~~i~~~~~ 241 (303)
+-+.+++.||.|++.+++.++. +.-.|
T Consensus 238 l~~~~Y~~Ad~I~~l~~~n~~~-q~~~G 264 (268)
T PF11997_consen 238 LSRLAYRAADRITPLYEYNREW-QIELG 264 (268)
T ss_pred HHHHHHHhhCeecccchhhHHH-HHHhC
Confidence 8888899999999999985544 44445
No 112
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=57.50 E-value=1.3e+02 Score=26.22 Aligned_cols=33 Identities=18% Similarity=0.182 Sum_probs=20.5
Q ss_pred EEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEE
Q 022054 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIV 72 (303)
Q Consensus 36 rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v 72 (303)
.+-+|. +.||---=+.++.++|++.+..-.+++
T Consensus 40 ~~lVvl----GSGGHT~EMlrLl~~l~~~y~~r~yI~ 72 (211)
T KOG3339|consen 40 STLVVL----GSGGHTGEMLRLLEALQDLYSPRSYIA 72 (211)
T ss_pred eEEEEE----cCCCcHHHHHHHHHHHHhhcCceEEEE
Confidence 555554 345544445688899999876555543
No 113
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=50.71 E-value=1.1e+02 Score=28.96 Aligned_cols=34 Identities=12% Similarity=0.308 Sum_probs=21.5
Q ss_pred cEEEEEcCCCCCCChHHHHHHHHHHHHHH-hCCCCeEEE
Q 022054 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQE-ESPDLDCIV 72 (303)
Q Consensus 35 ~rVa~~hp~l~~~GGaErv~~~la~aL~~-~~~~~~~~v 72 (303)
+.|.++-|-.| ..+. +.+.++++.+ .+|+.++++
T Consensus 41 p~VSViiP~~n---ee~~-l~~~L~Sl~~q~Yp~~EIiv 75 (373)
T TIGR03472 41 PPVSVLKPLHG---DEPE-LYENLASFCRQDYPGFQMLF 75 (373)
T ss_pred CCeEEEEECCC---CChh-HHHHHHHHHhcCCCCeEEEE
Confidence 57999999774 3333 4455555544 467777655
No 114
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=50.68 E-value=92 Score=28.97 Aligned_cols=24 Identities=13% Similarity=0.120 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHhCCCCeEEEEecc
Q 022054 53 VLWCAVKAIQEESPDLDCIVYTGD 76 (303)
Q Consensus 53 v~~~la~aL~~~~~~~~~~v~t~~ 76 (303)
...-++++|.+.+|++++.+.+..
T Consensus 15 l~tp~l~~Lk~~~P~a~I~~l~~~ 38 (344)
T TIGR02201 15 LTTPVISSLKKNYPDAKIDVLLYQ 38 (344)
T ss_pred eHHHHHHHHHHHCCCCEEEEEECc
Confidence 344678899999999998888864
No 115
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=50.62 E-value=13 Score=30.00 Aligned_cols=8 Identities=63% Similarity=0.974 Sum_probs=3.2
Q ss_pred hhccCCCC
Q 022054 27 HNARRNRT 34 (303)
Q Consensus 27 ~~~~~~~~ 34 (303)
+++|..++
T Consensus 22 ~~rRR~r~ 29 (130)
T PF12273_consen 22 HNRRRRRR 29 (130)
T ss_pred HHHHHhhc
Confidence 34444433
No 116
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=48.53 E-value=1.4e+02 Score=29.78 Aligned_cols=109 Identities=12% Similarity=0.076 Sum_probs=60.7
Q ss_pred cEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccceeecc
Q 022054 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (303)
Q Consensus 35 ~rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~~~~~ 114 (303)
.|||++-+++ ...-.-..+..+...+.+. ..++.+|....+ +.+...+++..... +|+.+.. .. .
T Consensus 1 LRIGyvS~Df-~~Hpv~~l~~~ll~~hDr~--rfev~~Ys~~~~-d~~~~~~~~~~~~~-------~~~dl~~--~~-~- 65 (468)
T PF13844_consen 1 LRIGYVSSDF-RNHPVGHLLQPLLENHDRS--RFEVFCYSLGPD-DGDTFRQRIRAEAD-------HFVDLSG--LS-D- 65 (468)
T ss_dssp EEEEEEES-S-SSSHHHHHHHHHHHHHHHH--TEEEEEEESS----SCHHHHHHHHHSE-------EEEEEEE---T-T-
T ss_pred CEEEEECCcc-hhCHHHHHHHHHHHhcCcc--cEEEEEEECCCC-CCcHHHHHHHHhCC-------eEEECcc--CC-c-
Confidence 4899999999 4677888888888888876 467788875321 11223233332111 1332211 00 0
Q ss_pred cCCchhhhhHHHHHHHHHHHHHhccCCcEEEeCCCcccccc--eeeccCCeE-EEEeecCC
Q 022054 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCRV-ICYTHYPT 172 (303)
Q Consensus 115 ~~~~~~l~~~~l~~~~~~~~~l~~~~pDv~i~t~~~~~~~p--la~~~~~~~-i~Y~H~P~ 172 (303)
---+.+.++..+.||++|-.|+....- +.....+|+ +.|+-||.
T Consensus 66 --------------~~~~A~~Ir~D~IDILVDL~GhT~~~R~~ifA~RpAPVQvswlGyp~ 112 (468)
T PF13844_consen 66 --------------DAEAAQRIRADGIDILVDLSGHTAGNRLEIFALRPAPVQVSWLGYPG 112 (468)
T ss_dssp --------------SHHHHHHHHHTT-SEEEESSTSSTSSSHHHHHT-SSSEEEEESSSSS
T ss_pred --------------HHHHHHHHHHCCCCEEEeCCCcCCCCHhHHHhcCCcceEEEecCCCc
Confidence 011345577889999999988754322 222234666 77777774
No 117
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=48.32 E-value=44 Score=33.27 Aligned_cols=29 Identities=10% Similarity=0.021 Sum_probs=21.8
Q ss_pred CEEEEEcCcccccChHHHHHHHHHcccCC
Q 022054 270 PAIISVAQFRPEKVRYKLISTRHILFNLR 298 (303)
Q Consensus 270 ~~iLsvgRl~p~Kn~~llI~Afa~L~~~~ 298 (303)
..|+++.|++.-|++..=++||.++-+++
T Consensus 277 ~ii~gvDrld~~kGi~~kl~Afe~fL~~~ 305 (474)
T PF00982_consen 277 KIIVGVDRLDYTKGIPEKLRAFERFLERY 305 (474)
T ss_dssp EEEEEE--B-GGG-HHHHHHHHHHHHHH-
T ss_pred EEEEEeccchhhcCHHHHHHHHHHHHHhC
Confidence 78999999999999999999999876554
No 118
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=45.43 E-value=3e+02 Score=26.90 Aligned_cols=43 Identities=16% Similarity=0.166 Sum_probs=34.3
Q ss_pred cEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccC
Q 022054 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDH 77 (303)
Q Consensus 35 ~rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~ 77 (303)
++|.+.=-+-.+=-|.|-.+..++.+|.+..|+.++.|++...
T Consensus 1 ~~i~i~G~~g~~N~GdeAil~~ii~~l~~~~p~~~i~v~S~~P 43 (426)
T PRK10017 1 MKLLILGNHTCGNRGDSAILRGLLDAINILNPHAEVDVMSRYP 43 (426)
T ss_pred CeEEEEccccCCCccHHHHHHHHHHHHHhhCCCCeEEEEecCc
Confidence 3566665544445799999999999999999999999988653
No 119
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=44.23 E-value=1.7e+02 Score=27.19 Aligned_cols=39 Identities=10% Similarity=0.062 Sum_probs=27.5
Q ss_pred cEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEecc
Q 022054 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (303)
Q Consensus 35 ~rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~ 76 (303)
|||.++.++. .|= =-+..=++++|.+.+|++++.+.+..
T Consensus 1 mrILii~~~~--iGD-~il~tP~l~~Lk~~~P~a~I~~l~~~ 39 (348)
T PRK10916 1 MKILVIGPSW--VGD-MMMSQSLYRTLKARYPQAIIDVMAPA 39 (348)
T ss_pred CcEEEEccCc--ccH-HHhHHHHHHHHHHHCCCCeEEEEech
Confidence 4678887654 333 33344678899999999998887753
No 120
>PF06024 DUF912: Nucleopolyhedrovirus protein of unknown function (DUF912); InterPro: IPR009261 This entry is represented by Autographa californica nuclear polyhedrosis virus (AcMNPV), Orf78; it is a family of uncharacterised viral proteins.
Probab=43.33 E-value=22 Score=27.52 Aligned_cols=30 Identities=13% Similarity=0.229 Sum_probs=17.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHh-h--hhccCCC
Q 022054 4 YGILIWAVITAVLASILILASH-V--HNARRNR 33 (303)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~ 33 (303)
+.++++++++-+|+++.+.++. | +|.|.+.
T Consensus 61 ~~iili~lls~v~IlVily~IyYFVILRer~~~ 93 (101)
T PF06024_consen 61 GNIILISLLSFVCILVILYAIYYFVILRERQKS 93 (101)
T ss_pred ccchHHHHHHHHHHHHHHhhheEEEEEeccccc
Confidence 4566677777777777544432 2 6665554
No 121
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=42.58 E-value=54 Score=32.49 Aligned_cols=87 Identities=10% Similarity=0.080 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEE-cCCCCCCccccc-------C-----C--------
Q 022054 205 IVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRV-YPPCDTSGLQVL-------P-----L-------- 263 (303)
Q Consensus 205 ~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VI-YPPvd~~~~~~~-------~-----~-------- 263 (303)
..|-+.- +.+.++..||.+-++|+-|+=+-..+.. +++.|| .|..++..|... . .
T Consensus 238 ~IYHrYC--~ERaa~h~AhVFTTVSeITa~EAeHlLk--RKPD~itPNGLNV~KFsA~HEFQNLHA~~KekIndFVRGHF 313 (692)
T KOG3742|consen 238 QIYHRYC--LERAAAHTAHVFTTVSEITALEAEHLLK--RKPDVITPNGLNVKKFSAVHEFQNLHAQKKEKINDFVRGHF 313 (692)
T ss_pred hhHHHHH--HHHHhhhhhhhhhhHHHHHHHHHHHHHh--cCCCeeCCCCcceeehhHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 4555443 4667778899999999999999888886 666555 567788777531 0 0
Q ss_pred ----C-CCCCCCEEEEEcCcc-cccChHHHHHHHHHcc
Q 022054 264 ----E-RSTEYPAIISVAQFR-PEKVRYKLISTRHILF 295 (303)
Q Consensus 264 ----~-~~~~~~~iLsvgRl~-p~Kn~~llI~Afa~L~ 295 (303)
+ .-++.-|+.-.||++ ..|+-|.-|||.++|.
T Consensus 314 ~GhlDFdLdkTlyfFiAGRYEf~NKGaDmFiEsLaRLN 351 (692)
T KOG3742|consen 314 HGHLDFDLDKTLYFFIAGRYEFSNKGADMFIESLARLN 351 (692)
T ss_pred cccccccccceEEEEEeeeeeeccCchHHHHHHHHHhH
Confidence 0 002235788899999 6799999999999873
No 122
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=40.28 E-value=2.2e+02 Score=26.56 Aligned_cols=42 Identities=10% Similarity=0.059 Sum_probs=30.4
Q ss_pred CCCcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEecc
Q 022054 32 NRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (303)
Q Consensus 32 ~~~~rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~ 76 (303)
+.+++|.++.++. . |==-...-++++|.+.+|++++.+.+..
T Consensus 3 ~~~~~ILii~~~~--i-GD~vl~~P~l~~Lk~~~P~a~I~~l~~~ 44 (352)
T PRK10422 3 KPFRRILIIKMRF--H-GDMLLTTPVISSLKKNYPDAKIDVLLYQ 44 (352)
T ss_pred CCCceEEEEEecc--c-CceeeHHHHHHHHHHHCCCCeEEEEecc
Confidence 4567899998654 3 3333445678899999999998887754
No 123
>PF15102 TMEM154: TMEM154 protein family
Probab=38.78 E-value=16 Score=30.27 Aligned_cols=24 Identities=17% Similarity=0.282 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHHHhhhhccCCCC
Q 022054 11 VITAVLASILILASHVHNARRNRT 34 (303)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~ 34 (303)
||+.++.++.|++.+.+|||.+..
T Consensus 67 LLvlLLl~vV~lv~~~kRkr~K~~ 90 (146)
T PF15102_consen 67 LLVLLLLSVVCLVIYYKRKRTKQE 90 (146)
T ss_pred HHHHHHHHHHHheeEEeecccCCC
Confidence 333334444555555566666553
No 124
>PF11346 DUF3149: Protein of unknown function (DUF3149); InterPro: IPR021494 This bacterial family of proteins has no known function.
Probab=38.05 E-value=60 Score=21.06 Aligned_cols=31 Identities=10% Similarity=0.131 Sum_probs=22.2
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHhhhhccCC
Q 022054 2 APYGILIWAVITAVLASILILASHVHNARRN 32 (303)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 (303)
.++|++.++||...+....-.+..+.+|-.+
T Consensus 9 s~vGL~Sl~vI~~~igm~~~~~~~F~~k~~~ 39 (42)
T PF11346_consen 9 SDVGLMSLIVIVFTIGMGVFFIRYFIRKMKE 39 (42)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 4789999999988777776666666555433
No 125
>PF08113 CoxIIa: Cytochrome c oxidase subunit IIa family; InterPro: IPR012538 This family consists of the cytochrome c oxidase subunit IIa family. The bax-type cytochrome c oxidase from Thermus thermophilus is known as a two subunit enzyme. From its crystal structure, it was discovered that an additional transmembrane helix, subunit IIa, spans the membrane. This subunit consists of 34 residues forming one helix across the membrane. The presence of this subunit seems to be important for the function of cytochrome c oxidases [].; PDB: 2QPD_C 3QJR_C 3EH5_C 3BVD_C 3S39_C 3QJU_C 3QJS_C 4EV3_C 3QJT_C 4FA7_C ....
Probab=38.01 E-value=72 Score=19.58 Aligned_cols=18 Identities=22% Similarity=0.281 Sum_probs=15.0
Q ss_pred CCchhHHHHHHHHHHHHH
Q 022054 2 APYGILIWAVITAVLASI 19 (303)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~ 19 (303)
.|-|.+.++.++++.+|+
T Consensus 4 kp~Gal~vv~iLt~~ILv 21 (34)
T PF08113_consen 4 KPKGALGVVMILTAFILV 21 (34)
T ss_dssp STHHHHHHHHHHHHHHHH
T ss_pred CCcceeeeHHHHHHHHHH
Confidence 378999999888888877
No 126
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=37.80 E-value=1.2e+02 Score=25.48 Aligned_cols=25 Identities=32% Similarity=0.427 Sum_probs=21.2
Q ss_pred CChHHHHHHHHHHHHHHhCCCCeEE
Q 022054 47 GGGGERVLWCAVKAIQEESPDLDCI 71 (303)
Q Consensus 47 ~GGaErv~~~la~aL~~~~~~~~~~ 71 (303)
.||.|-++..++..|.+.+|+.+++
T Consensus 54 lG~~~~~~~~~~~~l~~~yP~l~iv 78 (172)
T PF03808_consen 54 LGGSEEVLEKAAANLRRRYPGLRIV 78 (172)
T ss_pred EeCCHHHHHHHHHHHHHHCCCeEEE
Confidence 3888999999999999999988643
No 127
>PF05762 VWA_CoxE: VWA domain containing CoxE-like protein; InterPro: IPR008912 This group of proteins contains a VWA type domain and the function of this family is unknown. It is found as part of a CO oxidising (Cox) system operon in several bacteria [].
Probab=36.09 E-value=68 Score=28.24 Aligned_cols=50 Identities=10% Similarity=0.178 Sum_probs=40.3
Q ss_pred hhc-cCCCCcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEecc
Q 022054 27 HNA-RRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (303)
Q Consensus 27 ~~~-~~~~~~rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~ 76 (303)
+++ |+.++.++.++.|-.|..-|....++.++.++.+.++..++++|.+.
T Consensus 49 ~r~~r~~~~~~lvvl~DvSGSM~~~s~~~l~~~~~l~~~~~~~~~f~F~~~ 99 (222)
T PF05762_consen 49 RRRRRPRKPRRLVVLCDVSGSMAGYSEFMLAFLYALQRQFRRVRVFVFSTR 99 (222)
T ss_pred ccccccCCCccEEEEEeCCCChHHHHHHHHHHHHHHHHhCCCEEEEEEeee
Confidence 344 55556699999999999999888888999999999888877777653
No 128
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=35.87 E-value=2.2e+02 Score=26.20 Aligned_cols=38 Identities=11% Similarity=0.079 Sum_probs=25.3
Q ss_pred EEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEecc
Q 022054 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (303)
Q Consensus 36 rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~ 76 (303)
||.|+.+.. =|==-+..-++++|.+.+|++++.+.+..
T Consensus 1 rILii~~~~---iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~ 38 (334)
T TIGR02195 1 KILVIGPSW---VGDMVMAQSLYRLLKKRYPQAVIDVLAPA 38 (334)
T ss_pred CEEEEccch---hHHHHHHHHHHHHHHHHCCCCEEEEEech
Confidence 355565443 23334445678899999999998888753
No 129
>TIGR00696 wecB_tagA_cpsF bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family. The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.
Probab=33.12 E-value=1.8e+02 Score=24.77 Aligned_cols=25 Identities=28% Similarity=0.308 Sum_probs=20.7
Q ss_pred CChHHHHHHHHHHHHHHhCCCCeEE
Q 022054 47 GGGGERVLWCAVKAIQEESPDLDCI 71 (303)
Q Consensus 47 ~GGaErv~~~la~aL~~~~~~~~~~ 71 (303)
.||.|-|+..+++.|.+.+|+.+++
T Consensus 54 lG~~~~v~~~~~~~l~~~yP~l~i~ 78 (177)
T TIGR00696 54 YGGKPDVLQQLKVKLIKEYPKLKIV 78 (177)
T ss_pred ECCCHHHHHHHHHHHHHHCCCCEEE
Confidence 3888889989999999999888754
No 130
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=32.44 E-value=18 Score=29.09 Aligned_cols=26 Identities=15% Similarity=0.235 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhccCCCC
Q 022054 9 WAVITAVLASILILASHVHNARRNRT 34 (303)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 34 (303)
.+|+++++++++++..--.|+|....
T Consensus 7 iii~~i~l~~~~~~~~~rRR~r~G~~ 32 (130)
T PF12273_consen 7 IIIVAILLFLFLFYCHNRRRRRRGLQ 32 (130)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 34444444455555666655555544
No 131
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=30.39 E-value=2e+02 Score=24.09 Aligned_cols=32 Identities=22% Similarity=0.263 Sum_probs=24.3
Q ss_pred CCcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEE
Q 022054 33 RTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCI 71 (303)
Q Consensus 33 ~~~rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~ 71 (303)
+..+|.+ .||.|-++..+++.|.+.+|+.+++
T Consensus 45 ~~~~v~l-------lG~~~~~~~~~~~~l~~~yp~l~i~ 76 (171)
T cd06533 45 KGLRVFL-------LGAKPEVLEKAAERLRARYPGLKIV 76 (171)
T ss_pred cCCeEEE-------ECCCHHHHHHHHHHHHHHCCCcEEE
Confidence 3556654 3888888888888999999988643
No 132
>PF11857 DUF3377: Domain of unknown function (DUF3377); InterPro: IPR021805 This domain is functionally uncharacterised and found at the C terminus of peptidases belonging to MEROPS peptidase family M10A, membrane-type matrix metallopeptidases (clan MA). ; GO: 0004222 metalloendopeptidase activity
Probab=29.93 E-value=54 Score=23.96 Aligned_cols=17 Identities=18% Similarity=0.202 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHHHHhh
Q 022054 10 AVITAVLASILILASHV 26 (303)
Q Consensus 10 ~~~~~~~~~~~~~~~~~ 26 (303)
-+++++|+++++.++.+
T Consensus 37 Pl~L~LCiLvl~yai~~ 53 (74)
T PF11857_consen 37 PLVLLLCILVLIYAIFQ 53 (74)
T ss_pred HHHHHHHHHHHHHHhhe
Confidence 45678899988887776
No 133
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=28.64 E-value=2.3e+02 Score=26.38 Aligned_cols=40 Identities=8% Similarity=0.088 Sum_probs=29.9
Q ss_pred CcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEecc
Q 022054 34 TTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (303)
Q Consensus 34 ~~rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~ 76 (303)
.++|.++.++. . |=--+..-+...|++.+|++++.+.+..
T Consensus 1 ~~kIliir~~~--i-GD~vlt~p~~~~lk~~~P~a~i~~~~~~ 40 (334)
T COG0859 1 MMKILVIRLSK--L-GDVVLTLPLLRTLKKAYPNAKIDVLVPK 40 (334)
T ss_pred CceEEEEeccc--h-hHHHhHHHHHHHHHHHCCCCEEEEEecc
Confidence 46888888774 2 3345556778899999999998887754
No 134
>PF09861 DUF2088: Domain of unknown function (DUF2088); InterPro: IPR018657 This domain, found in various hypothetical proteins, has no known function. ; PDB: 2YJG_B.
Probab=28.51 E-value=87 Score=27.43 Aligned_cols=47 Identities=17% Similarity=0.236 Sum_probs=28.9
Q ss_pred CCCCcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCC---CCeEEEEeccC
Q 022054 31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESP---DLDCIVYTGDH 77 (303)
Q Consensus 31 ~~~~~rVa~~hp~l~~~GGaErv~~~la~aL~~~~~---~~~~~v~t~~~ 77 (303)
.++..+|+|+.||.......+.++-.+.+.|.+.+- +..+++-++.|
T Consensus 51 ~~~~~~V~Ivv~D~TRp~p~~~il~~ll~~L~~~Gv~~~~i~ii~A~G~H 100 (204)
T PF09861_consen 51 VKPGKRVAIVVDDITRPTPSDLILPALLEELEEAGVKDEDITIIIALGTH 100 (204)
T ss_dssp CTT-SEEEEEEE-TTS---HHHHHHHHHHHHHT-T-TT-EEEEEEE-TTS
T ss_pred hCCCCeEEEEeCCCCCCCCHHHHHHHHHHHHHhcCCCccCEEEEEeCCCC
Confidence 456699999999998887778888888898988543 33444444443
No 135
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=28.16 E-value=46 Score=34.18 Aligned_cols=26 Identities=15% Similarity=-0.041 Sum_probs=23.6
Q ss_pred CEEEEEcCcccccChHHHHHHHHHcc
Q 022054 270 PAIISVAQFRPEKVRYKLISTRHILF 295 (303)
Q Consensus 270 ~~iLsvgRl~p~Kn~~llI~Afa~L~ 295 (303)
+++..++||..||+.++++++..++.
T Consensus 390 ~~ig~v~Rl~~yKr~dLil~~i~~l~ 415 (601)
T TIGR02094 390 LTIGFARRFATYKRADLIFRDLERLA 415 (601)
T ss_pred cEEEEEEcchhhhhHHHHHHHHHHHH
Confidence 58889999999999999999988875
No 136
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=28.08 E-value=2.2e+02 Score=29.15 Aligned_cols=45 Identities=9% Similarity=0.166 Sum_probs=33.9
Q ss_pred hccCCCCcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEec
Q 022054 28 NARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTG 75 (303)
Q Consensus 28 ~~~~~~~~rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~ 75 (303)
.+|+.+++|||++-.+| .-.-....+..+.+.+.+.. .+++.|..
T Consensus 253 ~~~~~~rlRvGylS~dl-r~Havg~l~~~v~e~hDRdk--fEvfay~~ 297 (620)
T COG3914 253 IKRNGKRLRVGYLSSDL-RSHAVGFLLRWVFEYHDRDK--FEVFAYSL 297 (620)
T ss_pred ccccccceeEEEecccc-ccchHHHHHHHHHHHhchhh--eEEEEEec
Confidence 67888899999999999 45777777777777776653 45566653
No 137
>TIGR03141 cytochro_ccmD heme exporter protein CcmD. The model for this protein family describes a small, hydrophobic, and only moderately well-conserved protein, tricky to identify accurately for all of these reasons. However, members are found as part of large operons involved in heme export across the inner membrane for assembly of c-type cytochromes in a large number of bacteria. The gray zone between the trusted cutoff (13.0) and noise cutoff (4.75) includes both low-scoring examples and false-positive matches to hydrophobic domains of longer proteins.
Probab=26.79 E-value=1.2e+02 Score=19.72 Aligned_cols=14 Identities=21% Similarity=0.622 Sum_probs=9.9
Q ss_pred CCCchhHHHHHHHH
Q 022054 1 MAPYGILIWAVITA 14 (303)
Q Consensus 1 ~~~~~~~~~~~~~~ 14 (303)
|-+||.-+|.--..
T Consensus 1 MGgy~~yVW~sYg~ 14 (45)
T TIGR03141 1 MGGYAFYVWLAYGI 14 (45)
T ss_pred CCCccHHHHHHHHH
Confidence 77888888865443
No 138
>PF12606 RELT: Tumour necrosis factor receptor superfamily member 19; InterPro: IPR022248 The members of tumor necrosis factor receptor (TNFR) superfamily have been designated as the "guardians of the immune system" due to their roles in immune cell proliferation, differentiation, activation, and death (apoptosis). RELT (receptor expressed in lymphoid tissues) is a member of the TNFR superfamily. The messenger RNA of RELT is especially abundant in hematologic tissues such as spleen, lymph node, and peripheral blood leukocytes as well as in leukemias and lymphomas. RELT is able to activate the NF-kappaB pathway and selectively binds tumor necrosis factor receptor-associated factor 1 []. RELT like proteins 1 and 2 (RELL1 and RELL2) are two RELT homologues that bind to RELT. The expression of RELL1 at the mRNA level is ubiquitous, whereas expression of RELL2 mRNA is more restricted to particular tissues [].
Probab=25.79 E-value=1e+02 Score=20.77 Aligned_cols=19 Identities=11% Similarity=0.046 Sum_probs=10.5
Q ss_pred HHHHHHHHHHhhhhccCCC
Q 022054 15 VLASILILASHVHNARRNR 33 (303)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~ 33 (303)
+.+++.+.+.|++|++..+
T Consensus 12 v~~lLg~~I~~~~K~ygYk 30 (50)
T PF12606_consen 12 VMGLLGLSICTTLKAYGYK 30 (50)
T ss_pred HHHHHHHHHHHHhhccccc
Confidence 3344455566776666543
No 139
>PF02504 FA_synthesis: Fatty acid synthesis protein; InterPro: IPR003664 The plsX gene is part of the bacterial fab gene cluster which encodes several key fatty acid biosynthetic enzymes []. The plsX gene encodes a poorly understood enzyme of phospholipid metabolism [].; GO: 0003824 catalytic activity, 0006633 fatty acid biosynthetic process; PDB: 1VI1_B 1U7N_B.
Probab=24.90 E-value=5.2e+02 Score=24.39 Aligned_cols=24 Identities=8% Similarity=0.029 Sum_probs=18.2
Q ss_pred HHHHHHHHHHhccCCcEEEeCCCc
Q 022054 127 GSVYLSWEALCKFTPLYYFDTSGY 150 (303)
Q Consensus 127 ~~~~~~~~~l~~~~pDv~i~t~~~ 150 (303)
.++..+++.+++.+.|.++|+...
T Consensus 81 SSm~~a~~lvk~g~ada~vSaGnT 104 (323)
T PF02504_consen 81 SSMVVALELVKEGEADAFVSAGNT 104 (323)
T ss_dssp CHHHHHHHHHHTTS-SEEEESS-H
T ss_pred CcHHHHHHHhhcCCceEEEecCch
Confidence 478888899999999999988543
No 140
>PRK10355 xylF D-xylose transporter subunit XylF; Provisional
Probab=24.28 E-value=3.7e+02 Score=24.78 Aligned_cols=59 Identities=12% Similarity=0.087 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHhhhhccCCCCcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEecc
Q 022054 11 VITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (303)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~ 76 (303)
+|+++||+++. .++.-..++.+||++-|.+++ -.-..++-.+-.++.+. ++++.+..+.
T Consensus 6 ~~~~~~~~~~~----~~~~~~~~~~~Ig~i~~~~~~-~f~~~~~~gi~~~a~~~--g~~l~i~~~~ 64 (330)
T PRK10355 6 ILLTLCASLLL----TSVAAHAKEVKIGMAIDDLRL-ERWQKDRDIFVKKAESL--GAKVFVQSAN 64 (330)
T ss_pred HHHHHHHHHHH----hhccccCCCceEEEEecCCCc-hHHHHHHHHHHHHHHHc--CCEEEEECCC
Confidence 46677876532 345555678899999998854 34444444445555554 5666666554
No 141
>PF15183 MRAP: Melanocortin-2 receptor accessory protein family
Probab=24.19 E-value=1.2e+02 Score=22.66 Aligned_cols=22 Identities=14% Similarity=0.385 Sum_probs=16.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHhh
Q 022054 5 GILIWAVITAVLASILILASHV 26 (303)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~ 26 (303)
-|.||+-|++|..++-.+.+.+
T Consensus 39 VI~FWv~LA~FV~~lF~iL~~m 60 (90)
T PF15183_consen 39 VIAFWVSLAAFVVFLFLILLYM 60 (90)
T ss_pred ehhHHHHHHHHHHHHHHHHHHH
Confidence 4789999999988875444444
No 142
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=24.01 E-value=2.2e+02 Score=29.33 Aligned_cols=32 Identities=25% Similarity=0.329 Sum_probs=20.3
Q ss_pred cEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeE
Q 022054 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDC 70 (303)
Q Consensus 35 ~rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~ 70 (303)
.+|.+.-=.. -|+....+++++|.+..|+.++
T Consensus 227 ~kIfI~AGE~----SGDlhgA~Li~aLk~~~P~i~~ 258 (608)
T PRK01021 227 TSCFISAGEH----SGDTLGGNLLKEIKALYPDIHC 258 (608)
T ss_pred CeEEEEeccc----cHHHHHHHHHHHHHhcCCCcEE
Confidence 4666654222 2466666788888888887653
No 143
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=23.95 E-value=4.6e+02 Score=26.32 Aligned_cols=38 Identities=16% Similarity=0.171 Sum_probs=25.1
Q ss_pred CCcEEEEEcCCCCCCChHHHHHHHHHHHH-HH-hCCCCeEEEEe
Q 022054 33 RTTSVAFFHPNTNDGGGGERVLWCAVKAI-QE-ESPDLDCIVYT 74 (303)
Q Consensus 33 ~~~rVa~~hp~l~~~GGaErv~~~la~aL-~~-~~~~~~~~v~t 74 (303)
..++|+++.|..+. |.|+.++++.+ .+ .+++.++++..
T Consensus 64 ~~p~vaIlIPA~NE----~~vI~~~l~s~L~~ldY~~~eIiVv~ 103 (504)
T PRK14716 64 PEKRIAIFVPAWRE----ADVIGRMLEHNLATLDYENYRIFVGT 103 (504)
T ss_pred CCCceEEEEeccCc----hhHHHHHHHHHHHcCCCCCeEEEEEE
Confidence 35789999999964 45666666653 33 35666655544
No 144
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=23.58 E-value=4.8e+02 Score=23.83 Aligned_cols=39 Identities=13% Similarity=0.074 Sum_probs=26.7
Q ss_pred cEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEecc
Q 022054 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (303)
Q Consensus 35 ~rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~ 76 (303)
|||.++++.- =|=--...-++++|.+.+|++++.+.+..
T Consensus 1 m~ILii~~~~---iGD~v~~~p~~~~lk~~~P~a~I~~l~~~ 39 (322)
T PRK10964 1 MRVLIVKTSS---MGDVLHTLPALTDAQQAIPGIQFDWVVEE 39 (322)
T ss_pred CeEEEEeccc---hHHHHhHHHHHHHHHHhCCCCEEEEEECH
Confidence 5788888543 23233333577899999999998887753
No 145
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=23.45 E-value=5.3e+02 Score=22.92 Aligned_cols=38 Identities=24% Similarity=0.293 Sum_probs=28.5
Q ss_pred ccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCccc
Q 022054 219 GSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQ 259 (303)
Q Consensus 219 ~~~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~ 259 (303)
.+.+|.+|+|.+++. ++....| ....++|+|-+.+...
T Consensus 196 i~~~~l~I~~Dsg~~-HlA~a~~--~p~i~l~g~~~~~~~~ 233 (279)
T cd03789 196 LARADLVVTNDSGPM-HLAAALG--TPTVALFGPTDPARTG 233 (279)
T ss_pred HHhCCEEEeeCCHHH-HHHHHcC--CCEEEEECCCCccccC
Confidence 457999999987654 5556776 6788899988776653
No 146
>PRK15395 methyl-galactoside ABC transporter galactose-binding periplasmic protein MglB; Provisional
Probab=23.01 E-value=3.3e+02 Score=25.08 Aligned_cols=43 Identities=9% Similarity=-0.021 Sum_probs=28.1
Q ss_pred CCCCcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEec
Q 022054 31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTG 75 (303)
Q Consensus 31 ~~~~~rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~ 75 (303)
.+++.+||++-|+.. ...-+++...+-+++.+.+ ++++.+.++
T Consensus 21 ~~~~~~Igvv~~~~~-~~f~~~~~~gi~~~a~~~g-~~~~~~~~~ 63 (330)
T PRK15395 21 AAADTRIGVTIYKYD-DNFMSVVRKAIEKDAKAAP-DVQLLMNDS 63 (330)
T ss_pred hcCCceEEEEEecCc-chHHHHHHHHHHHHHHhcC-CeEEEEecC
Confidence 566789999999873 4677777766667666653 244444343
No 147
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=21.65 E-value=4.3e+02 Score=24.73 Aligned_cols=37 Identities=14% Similarity=0.073 Sum_probs=25.2
Q ss_pred cEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEecc
Q 022054 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (303)
Q Consensus 35 ~rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~ 76 (303)
|||.|+-. +..|=....+ .++++|+++| ++|.++|+.
T Consensus 1 mrIl~~~~--p~~GHv~P~l-~la~~L~~rG--h~V~~~t~~ 37 (401)
T cd03784 1 MRVLITTI--GSRGDVQPLV-ALAWALRAAG--HEVRVATPP 37 (401)
T ss_pred CeEEEEeC--CCcchHHHHH-HHHHHHHHCC--CeEEEeeCH
Confidence 46776652 2456677766 8999999886 556777754
No 148
>PF05454 DAG1: Dystroglycan (Dystrophin-associated glycoprotein 1); InterPro: IPR008465 Dystroglycan is one of the dystrophin-associated glycoproteins, which is encoded by a 5.5 kb transcript in Homo sapiens. The protein product is cleaved into two non-covalently associated subunits, [alpha] (N-terminal) and [beta] (C-terminal). In skeletal muscle the dystroglycan complex works as a transmembrane linkage between the extracellular matrix and the cytoskeleton [alpha]-dystroglycan is extracellular and binds to merosin ([alpha]-2 laminin) in the basement membrane, while [beta]-dystroglycan is a transmembrane protein and binds to dystrophin, which is a large rod-like cytoskeletal protein, absent in Duchenne muscular dystrophy patients. Dystrophin binds to intracellular actin cables. In this way, the dystroglycan complex, which links the extracellular matrix to the intracellular actin cables, is thought to provide structural integrity in muscle tissues. The dystroglycan complex is also known to serve as an agrin receptor in muscle, where it may regulate agrin-induced acetylcholine receptor clustering at the neuromuscular junction. There is also evidence which suggests the function of dystroglycan as a part of the signal transduction pathway because it is shown that Grb2, a mediator of the Ras-related signal pathway, can interact with the cytoplasmic domain of dystroglycan. In general, aberrant expression of dystrophin-associated protein complex underlies the pathogenesis of Duchenne muscular dystrophy, Becker muscular dystrophy and severe childhood autosomal recessive muscular dystrophy. Interestingly, no genetic disease has been described for either [alpha]- or [beta]-dystroglycan. Dystroglycan is widely distributed in non-muscle tissues as well as in muscle tissues. During epithelial morphogenesis of kidney, the dystroglycan complex is shown to act as a receptor for the basement membrane. Dystroglycan expression in Mus musculus brain and neural retina has also been reported. However, the physiological role of dystroglycan in non-muscle tissues has remained unclear [].; PDB: 1EG4_P.
Probab=20.64 E-value=33 Score=31.85 Aligned_cols=28 Identities=29% Similarity=0.301 Sum_probs=0.0
Q ss_pred HHHHHHHHHH-HHHHHhhhhccCCCCcEE
Q 022054 10 AVITAVLASI-LILASHVHNARRNRTTSV 37 (303)
Q Consensus 10 ~~~~~~~~~~-~~~~~~~~~~~~~~~~rV 37 (303)
+|+.+++.|| .+++.+..|+|...|+.+
T Consensus 152 aVVI~~iLLIA~iIa~icyrrkR~GK~~~ 180 (290)
T PF05454_consen 152 AVVIAAILLIAGIIACICYRRKRKGKMSL 180 (290)
T ss_dssp -----------------------------
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhcccccc
Confidence 3333333344 444444466776777665
Done!