Query 022054
Match_columns 303
No_of_seqs 128 out of 862
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 13:18:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022054.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022054hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fro_A GLGA glycogen synthase; 99.6 2E-14 6.7E-19 135.5 17.5 245 33-297 1-280 (439)
2 3c48_A Predicted glycosyltrans 99.6 1.9E-14 6.4E-19 136.6 15.5 231 31-297 17-271 (438)
3 3okp_A GDP-mannose-dependent a 99.6 4.5E-14 1.5E-18 131.3 17.2 210 33-297 3-226 (394)
4 2r60_A Glycosyl transferase, g 99.6 4.6E-14 1.6E-18 136.8 16.2 241 33-297 6-290 (499)
5 2iw1_A Lipopolysaccharide core 99.5 1.5E-13 5E-18 127.2 16.9 78 220-297 135-224 (374)
6 2gek_A Phosphatidylinositol ma 99.5 3.9E-13 1.3E-17 125.6 16.2 216 30-297 16-237 (406)
7 2jjm_A Glycosyl transferase, g 99.5 2.1E-13 7.1E-18 127.8 13.4 207 46-301 25-243 (394)
8 2iuy_A Avigt4, glycosyltransfe 99.5 1.7E-12 6E-17 119.2 17.0 172 34-294 3-187 (342)
9 2x6q_A Trehalose-synthase TRET 99.5 1.1E-12 3.9E-17 123.6 16.1 212 28-297 34-259 (416)
10 3oy2_A Glycosyltransferase B73 99.4 6.6E-13 2.3E-17 125.0 13.4 201 35-297 1-212 (413)
11 2qzs_A Glycogen synthase; glyc 99.4 1.1E-11 3.7E-16 119.4 17.6 81 217-297 200-320 (485)
12 1rzu_A Glycogen synthase 1; gl 99.4 2.1E-12 7E-17 124.4 12.6 82 216-297 201-319 (485)
13 3s28_A Sucrose synthase 1; gly 99.2 8.6E-11 2.9E-15 121.1 14.7 243 30-297 274-600 (816)
14 2x0d_A WSAF; GT4 family, trans 99.1 6E-10 2.1E-14 106.4 13.1 79 217-297 188-270 (413)
15 1f0k_A MURG, UDP-N-acetylgluco 99.0 3.2E-09 1.1E-13 97.8 11.3 198 35-296 7-211 (364)
16 3vue_A GBSS-I, granule-bound s 98.9 1.4E-07 4.7E-12 93.0 20.0 81 217-297 237-355 (536)
17 3beo_A UDP-N-acetylglucosamine 98.8 3.1E-09 1.1E-13 98.2 4.6 77 220-297 149-235 (375)
18 2vsy_A XCC0866; transferase, g 98.5 2.1E-06 7.3E-11 83.9 14.8 190 31-297 202-403 (568)
19 2hy7_A Glucuronosyltransferase 98.5 4.3E-07 1.5E-11 86.0 9.5 66 215-284 172-237 (406)
20 1vgv_A UDP-N-acetylglucosamine 98.4 8.9E-07 3.1E-11 81.9 10.6 78 219-297 139-235 (384)
21 1v4v_A UDP-N-acetylglucosamine 98.2 5.1E-06 1.7E-10 76.7 10.1 77 220-297 145-227 (376)
22 3nb0_A Glycogen [starch] synth 98.1 9.8E-06 3.3E-10 81.5 10.8 80 215-295 254-359 (725)
23 2xci_A KDO-transferase, 3-deox 98.1 0.00012 4E-09 68.5 16.2 76 216-298 148-223 (374)
24 3s2u_A UDP-N-acetylglucosamine 97.6 0.0015 5.2E-08 60.6 15.5 132 121-297 73-209 (365)
25 3otg_A CALG1; calicheamicin, T 97.6 0.0016 5.5E-08 60.4 15.5 44 28-76 14-57 (412)
26 1uqt_A Alpha, alpha-trehalose- 97.4 0.00017 5.7E-09 70.1 6.6 54 244-297 219-283 (482)
27 3dzc_A UDP-N-acetylglucosamine 97.1 0.0028 9.5E-08 59.6 10.9 215 32-297 23-260 (396)
28 3t5t_A Putative glycosyltransf 96.4 0.015 5.2E-07 56.5 10.5 77 220-297 206-308 (496)
29 2iyf_A OLED, oleandomycin glyc 96.3 0.076 2.6E-06 49.4 14.2 38 34-76 7-44 (430)
30 4fzr_A SSFS6; structural genom 95.5 0.051 1.7E-06 50.1 9.1 42 29-75 10-51 (398)
31 2p6p_A Glycosyl transferase; X 94.7 0.34 1.2E-05 44.1 12.4 36 35-75 1-36 (384)
32 3ot5_A UDP-N-acetylglucosamine 93.8 0.06 2E-06 50.6 5.1 76 220-297 168-254 (403)
33 3tsa_A SPNG, NDP-rhamnosyltran 93.6 0.18 6.3E-06 46.0 8.1 37 34-75 1-37 (391)
34 4hwg_A UDP-N-acetylglucosamine 93.2 0.59 2E-05 43.5 10.9 75 220-296 145-234 (385)
35 3rsc_A CALG2; TDP, enediyne, s 93.2 1.6 5.3E-05 40.0 13.8 40 31-75 17-56 (415)
36 3ia7_A CALG4; glycosysltransfe 93.2 2.2 7.5E-05 38.6 14.6 36 35-75 5-40 (402)
37 2bfw_A GLGA glycogen synthase; 89.6 0.18 6.1E-06 41.3 2.8 27 269-295 36-63 (200)
38 3oti_A CALG3; calicheamicin, T 84.8 3.4 0.00012 37.7 8.8 41 30-75 16-56 (398)
39 3rhz_A GTF3, nucleotide sugar 82.9 1.9 6.6E-05 39.3 6.1 62 215-280 127-189 (339)
40 4amg_A Snogd; transferase, pol 67.1 68 0.0023 28.4 14.4 41 31-76 19-59 (400)
41 1psw_A ADP-heptose LPS heptosy 64.6 73 0.0025 27.9 11.8 36 220-258 260-295 (348)
42 2iya_A OLEI, oleandomycin glyc 64.2 54 0.0018 29.7 11.0 40 32-76 10-49 (424)
43 2gt1_A Lipopolysaccharide hept 62.6 60 0.0021 28.3 10.7 39 35-76 1-39 (326)
44 2yjn_A ERYCIII, glycosyltransf 49.0 47 0.0016 30.4 7.8 38 33-75 19-56 (441)
45 3tov_A Glycosyl transferase fa 44.9 1.3E+02 0.0043 26.9 9.8 43 31-76 5-47 (349)
46 4gyw_A UDP-N-acetylglucosamine 44.0 53 0.0018 32.9 7.7 113 31-172 234-349 (723)
47 3q3e_A HMW1C-like glycosyltran 32.7 64 0.0022 32.0 6.0 40 133-172 342-384 (631)
48 2ks1_B Epidermal growth factor 32.4 46 0.0016 20.9 3.2 15 21-35 29-43 (44)
49 1pja_A Palmitoyl-protein thioe 32.0 27 0.00092 29.6 2.9 38 32-73 34-71 (302)
50 2l9s_A PHD finger protein 12; 29.9 40 0.0014 21.2 2.6 26 277-303 7-32 (45)
51 3h4t_A Glycosyltransferase GTF 29.8 1.7E+02 0.006 26.2 8.3 26 269-294 222-248 (404)
52 3c01_A Surface presentation of 28.1 72 0.0025 20.3 3.7 11 218-228 38-48 (48)
53 3bzy_A ESCU; auto cleavage pro 24.5 90 0.0031 20.4 3.7 11 218-228 44-54 (54)
54 2jwa_A Receptor tyrosine-prote 24.3 1.2E+02 0.0042 18.9 4.2 12 23-34 32-43 (44)
55 2l2t_A Receptor tyrosine-prote 24.2 1.2E+02 0.004 19.0 4.0 11 25-35 32-42 (44)
56 2knc_A Integrin alpha-IIB; tra 23.0 1.2E+02 0.0041 19.8 4.1 14 6-19 10-23 (54)
57 2l8s_A Integrin alpha-1; trans 22.9 47 0.0016 21.8 2.1 17 3-19 4-20 (54)
58 1rrv_A Glycosyltransferase GTF 21.3 4.3E+02 0.015 23.4 10.4 26 269-294 238-266 (416)
59 2l6w_A Beta-type platelet-deri 25.1 22 0.00077 21.7 0.0 12 8-19 7-18 (39)
No 1
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.60 E-value=2e-14 Score=135.51 Aligned_cols=245 Identities=14% Similarity=0.021 Sum_probs=133.5
Q ss_pred CCcEEEEEcCCCC--CCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhh---hc--cCc--cccCCCeEE
Q 022054 33 RTTSVAFFHPNTN--DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAV---DR--FGV--ELLHPPKVV 103 (303)
Q Consensus 33 ~~~rVa~~hp~l~--~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~---~~--~~~--~l~~~~~~i 103 (303)
++|||+++.+... ..||+|+++.+++++|.+.| +++.++|...+...+.....++ .. ... ...+.+++.
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G--~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 78 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLG--HEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIY 78 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTT--CEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCC--CeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEE
Confidence 5799999998742 36999999999999999986 5567777543211100000000 00 000 012233333
Q ss_pred EccccceeecccCC-chhh-hhHHH---HHHHHHHHHH--hccCCcEEEeCCCcccccce--eeccCCeEEEEeecCCcc
Q 022054 104 HLYRRKWIEESTYP-RFTM-IGQSF---GSVYLSWEAL--CKFTPLYYFDTSGYAFTYPL--ARIFGCRVICYTHYPTIS 174 (303)
Q Consensus 104 ~L~~~~~~~~~~~~-~~~l-~~~~l---~~~~~~~~~l--~~~~pDv~i~t~~~~~~~pl--a~~~~~~~i~Y~H~P~~s 174 (303)
.+..........++ ...- ..+.. ..+....+.+ +..+||+++.........+. +...+.|++..+|.....
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~ 158 (439)
T 3fro_A 79 RIGGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLNKS 158 (439)
T ss_dssp EEESGGGGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHHHCCCEEEEESCCCCC
T ss_pred EecchhccccccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhccCCCEEEEecccccc
Confidence 33221111111111 0000 11111 0111112222 24589988865433322221 224689999999986510
Q ss_pred hHHHhhhhccccccCchhhhhhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCC
Q 022054 175 LDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPC 253 (303)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~-~~~~~VIYPPv 253 (303)
.+-.. ...... ++...+.....+.+...+.+|.++++|+.+++.....++. +.++.||+|++
T Consensus 159 -~~~~~------------~~~~~~----~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~~~i~vi~ngv 221 (439)
T 3fro_A 159 -KLPAF------------YFHEAG----LSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGI 221 (439)
T ss_dssp -CEEHH------------HHHHTT----CGGGCCSSEECHHHHHHHHCSEEEESCHHHHHHTHHHHGGGTTSEEECCCCC
T ss_pred -cCchH------------HhCccc----cccccccceeeHhhhhhhhccEEEecCHHHHHHHhhhhhhcCCceeecCCCC
Confidence 00000 000000 0000000000123444577999999999999997776665 68999999999
Q ss_pred CCCcccccCC---------------CCCCCCCEEEEEcCcc-cccChHHHHHHHHHcccC
Q 022054 254 DTSGLQVLPL---------------ERSTEYPAIISVAQFR-PEKVRYKLISTRHILFNL 297 (303)
Q Consensus 254 d~~~~~~~~~---------------~~~~~~~~iLsvgRl~-p~Kn~~llI~Afa~L~~~ 297 (303)
|.+.+...+. .-.. ++.++++||+. ++||++.+|+|++.+.++
T Consensus 222 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~ 280 (439)
T 3fro_A 222 DCSFWNESYLTGSRDERKKSLLSKFGMDE-GVTFMFIGRFDRGQKGVDVLLKAIEILSSK 280 (439)
T ss_dssp CTTTSCGGGSCSCHHHHHHHHHHHHTCCS-CEEEEEECCSSCTTBCHHHHHHHHHHHHTS
T ss_pred CchhcCcccccchhhhhHHHHHHHcCCCC-CcEEEEEcccccccccHHHHHHHHHHHHhc
Confidence 9988752110 0022 37899999999 999999999999999764
No 2
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.59 E-value=1.9e-14 Score=136.56 Aligned_cols=231 Identities=15% Similarity=0.104 Sum_probs=129.3
Q ss_pred CCCCcEEEEEcCCCC--------CCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeE
Q 022054 31 RNRTTSVAFFHPNTN--------DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKV 102 (303)
Q Consensus 31 ~~~~~rVa~~hp~l~--------~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 102 (303)
..++|||+++.++.. ..||+|+++.+++++|.+.+ +++.+++... ... ... .....+.+++
T Consensus 17 ~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G--~~V~v~~~~~--~~~-----~~~--~~~~~~~v~v 85 (438)
T 3c48_A 17 RGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQG--IEVDIYTRAT--RPS-----QGE--IVRVAENLRV 85 (438)
T ss_dssp --CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTT--CEEEEEEECC--CGG-----GCS--EEEEETTEEE
T ss_pred CcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcC--CEEEEEecCC--CCC-----Ccc--cccccCCeEE
Confidence 456789999997552 35999999999999999985 5556666532 110 000 0012233334
Q ss_pred EEccccceeecccCCchhhhhHHHHHHH-HHHHH-Hhcc-CCcEEEeCCCcccccc--eeeccCCeEEEEeecCCcchHH
Q 022054 103 VHLYRRKWIEESTYPRFTMIGQSFGSVY-LSWEA-LCKF-TPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDM 177 (303)
Q Consensus 103 i~L~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~-l~~~-~pDv~i~t~~~~~~~p--la~~~~~~~i~Y~H~P~~s~~~ 177 (303)
+.+...... ..+...+. ..+..+. ...+. +++. +||+++.........+ ++...+.|++..+|.... .
T Consensus 86 ~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~-~-- 158 (438)
T 3c48_A 86 INIAAGPYE---GLSKEELP-TQLAAFTGGMLSFTRREKVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAA-V-- 158 (438)
T ss_dssp EEECCSCSS---SCCGGGGG-GGHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHH-H--
T ss_pred EEecCCCcc---ccchhHHH-HHHHHHHHHHHHHHHhccCCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCcc-c--
Confidence 443321110 00111111 1111111 11222 3333 4998875432211111 122357899999998641 0
Q ss_pred HhhhhccccccCchhhhhhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCC
Q 022054 178 ISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTS 256 (303)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~-~~~~~VIYPPvd~~ 256 (303)
.. . .+. . ........ ..++.+...+.+|.++++|+++++.+.+.+|. ..++.||+|++|.+
T Consensus 159 -~~---~--~~~------~---~~~~~~~~---~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~g~~~~k~~vi~ngvd~~ 220 (438)
T 3c48_A 159 -KN---S--YRD------D---SDTPESEA---RRICEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVE 220 (438)
T ss_dssp -HS---C--C-------------CCHHHHH---HHHHHHHHHHHCSEEEESSHHHHHHHHHHHCCCGGGEEECCCCCCTT
T ss_pred -cc---c--ccc------c---cCCcchHH---HHHHHHHHHhcCCEEEEcCHHHHHHHHHHhCCChhheEEecCCcccc
Confidence 00 0 000 0 00000111 11234555678999999999999999999987 56799999999988
Q ss_pred cccccCCCC----------CCCCCEEEEEcCcccccChHHHHHHHHHcccC
Q 022054 257 GLQVLPLER----------STEYPAIISVAQFRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 257 ~~~~~~~~~----------~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~~ 297 (303)
.+...+... ....+.++++||+.++||++.+|+|++.+.++
T Consensus 221 ~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~ 271 (438)
T 3c48_A 221 LYSPGNDRATERSRRELGIPLHTKVVAFVGRLQPFKGPQVLIKAVAALFDR 271 (438)
T ss_dssp TSCCC----CHHHHHHTTCCSSSEEEEEESCBSGGGCHHHHHHHHHHHHHH
T ss_pred ccCCcccchhhhhHHhcCCCCCCcEEEEEeeecccCCHHHHHHHHHHHHhh
Confidence 775321110 12257899999999999999999999998754
No 3
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.58 E-value=4.5e-14 Score=131.33 Aligned_cols=210 Identities=14% Similarity=0.091 Sum_probs=128.3
Q ss_pred CCcEEEEEcCCCC-CCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEcccccee
Q 022054 33 RTTSVAFFHPNTN-DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWI 111 (303)
Q Consensus 33 ~~~rVa~~hp~l~-~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~~ 111 (303)
++|||+++.+.+. ..||+|+++.+++++| . ++++.+++... +.. .........+ +.++.+.....
T Consensus 3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~--g~~v~v~~~~~--~~~-~~~~~~~~~~------~~~~~~~~~~~- 68 (394)
T 3okp_A 3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--D--PESIVVFASTQ--NAE-EAHAYDKTLD------YEVIRWPRSVM- 68 (394)
T ss_dssp -CCCEEEEESCCTTSCSHHHHHHHHHHTTS--C--GGGEEEEEECS--SHH-HHHHHHTTCS------SEEEEESSSSC-
T ss_pred CCceEEEEeCccCCccchHHHHHHHHHHHh--c--CCeEEEEECCC--Ccc-chhhhccccc------eEEEEcccccc-
Confidence 4689999998552 3699999999999999 2 45667777643 111 1111111112 22333222111
Q ss_pred ecccCCchhhhhHHHHHHHHHHHHHhccCCcEEEeCCCcccccc--eeeccCCe-EEEEeecCCcchHHHhhhhcccccc
Q 022054 112 EESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCR-VICYTHYPTISLDMISRVREGSSMY 188 (303)
Q Consensus 112 ~~~~~~~~~l~~~~l~~~~~~~~~l~~~~pDv~i~t~~~~~~~p--la~~~~~~-~i~Y~H~P~~s~~~~~~~~~~~~~~ 188 (303)
++.. .......+.+++.+||+++.......... ++...+.| ++..+|.... . |..
T Consensus 69 ----~~~~-------~~~~~l~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~-----~--~~~---- 126 (394)
T 3okp_A 69 ----LPTP-------TTAHAMAEIIREREIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEV-----G--WSM---- 126 (394)
T ss_dssp ----CSCH-------HHHHHHHHHHHHTTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHH-----H--HTT----
T ss_pred ----ccch-------hhHHHHHHHHHhcCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchh-----h--hhh----
Confidence 1111 11222345567889998775433221111 11234554 7778887541 0 100
Q ss_pred CchhhhhhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCccccc-C-----
Q 022054 189 NNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVL-P----- 262 (303)
Q Consensus 189 ~~~~~~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~~~-~----- 262 (303)
. ..++. ++++..+.+|.++++|+++++.+.+.++...++.||||++|.+.+... +
T Consensus 127 -----------~----~~~~~----~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~ 187 (394)
T 3okp_A 127 -----------L----PGSRQ----SLRKIGTEVDVLTYISQYTLRRFKSAFGSHPTFEHLPSGVDVKRFTPATPEDKSA 187 (394)
T ss_dssp -----------S----HHHHH----HHHHHHHHCSEEEESCHHHHHHHHHHHCSSSEEEECCCCBCTTTSCCCCHHHHHH
T ss_pred -----------c----chhhH----HHHHHHHhCCEEEEcCHHHHHHHHHhcCCCCCeEEecCCcCHHHcCCCCchhhHH
Confidence 0 11111 234445789999999999999999999755689999999999877531 0
Q ss_pred ----CCCCCCCCEEEEEcCcccccChHHHHHHHHHcccC
Q 022054 263 ----LERSTEYPAIISVAQFRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 263 ----~~~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~~ 297 (303)
..-......++++||+.++|+++.+++|++.+.++
T Consensus 188 ~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~ 226 (394)
T 3okp_A 188 TRKKLGFTDTTPVIACNSRLVPRKGQDSLIKAMPQVIAA 226 (394)
T ss_dssp HHHHTTCCTTCCEEEEESCSCGGGCHHHHHHHHHHHHHH
T ss_pred HHHhcCCCcCceEEEEEeccccccCHHHHHHHHHHHHhh
Confidence 00012247999999999999999999999998765
No 4
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.56 E-value=4.6e-14 Score=136.82 Aligned_cols=241 Identities=17% Similarity=0.060 Sum_probs=134.0
Q ss_pred CCcEEEEEcCCC------------CCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccc--cC
Q 022054 33 RTTSVAFFHPNT------------NDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVEL--LH 98 (303)
Q Consensus 33 ~~~rVa~~hp~l------------~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l--~~ 98 (303)
++|||+++.++. ...||+|+++.+++++|.+.+ +++.++|...+... . ....+.+ ..+ .+
T Consensus 6 ~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G--~~V~v~~~~~~~~~--~-~~~~~~~-~~~~~~~ 79 (499)
T 2r60_A 6 RIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMG--VQVDIITRRIKDEN--W-PEFSGEI-DYYQETN 79 (499)
T ss_dssp -CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTT--CEEEEEEECCCBTT--B-GGGCCSE-EECTTCS
T ss_pred ccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcC--CeEEEEeCCCCccc--c-cchhhhH-HhccCCC
Confidence 468999999853 246999999999999999985 55567665431110 0 0000000 011 12
Q ss_pred CCeEEEccccceeecccCCchhhhhHHHHH-HHHHHHHHhc--cCCcEEEeCCCcccccce--eeccCCeEEEEeecCCc
Q 022054 99 PPKVVHLYRRKWIEESTYPRFTMIGQSFGS-VYLSWEALCK--FTPLYYFDTSGYAFTYPL--ARIFGCRVICYTHYPTI 173 (303)
Q Consensus 99 ~~~~i~L~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~l~~--~~pDv~i~t~~~~~~~pl--a~~~~~~~i~Y~H~P~~ 173 (303)
.++++.+..... ...+... ++..+.. .....+.+++ .+||+++.........+. ++..+.|+++.+|....
T Consensus 80 gv~v~~~~~~~~---~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~Divh~~~~~~~~~~~~~~~~~~~p~v~~~H~~~~ 155 (499)
T 2r60_A 80 KVRIVRIPFGGD---KFLPKEE-LWPYLHEYVNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHSLGA 155 (499)
T ss_dssp SEEEEEECCSCS---SCCCGGG-CGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHCCCEEEECSSCHH
T ss_pred CeEEEEecCCCc---CCcCHHH-HHHHHHHHHHHHHHHHHhcCCCCCEEEEcCCcchHHHHHHHHhcCCcEEEEccCccc
Confidence 333443322100 0001001 1111111 1122344555 489988854322211111 22458899999998541
Q ss_pred chHHHhhhhccccccCchhhhhhchhhhHhHHHHH-HHHHHHHHHhccCCcEEEEcCHHHHHHHHHH--hC------CCC
Q 022054 174 SLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYY-TFFSWMYGLVGSCADLAMVNSSWTQSHIEKL--WG------IPD 244 (303)
Q Consensus 174 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~-~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~--~~------~~~ 244 (303)
... .. +.. .......+...+. ....++.+...+.+|.++++|+++++.+.+. || ...
T Consensus 156 -~~~-~~-------~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~~ 221 (499)
T 2r60_A 156 -QKM-EK-------LNV-----NTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDDD 221 (499)
T ss_dssp -HHH-HT-------TCC-----CSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHHHHHHTTTSGGGTTTCCTTCGG
T ss_pred -ccc-hh-------hcc-----CCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEECCHHHHHHHHhhhcccccccccCCC
Confidence 100 00 000 0000011111111 1112234566788999999999999999988 76 345
Q ss_pred CceEEcCCCCCCcccccCC-----------C-----CCCCCCEEEEEcCcccccChHHHHHHHHHcccC
Q 022054 245 RIKRVYPPCDTSGLQVLPL-----------E-----RSTEYPAIISVAQFRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 245 ~~~VIYPPvd~~~~~~~~~-----------~-----~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~~ 297 (303)
++.||||++|.+.+...+. . .....++++++||+.++||++.+|+|++.+.++
T Consensus 222 ki~vi~ngvd~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~ 290 (499)
T 2r60_A 222 KFSVIPPGVNTRVFDGEYGDKIKAKITKYLERDLGSERMELPAIIASSRLDQKKNHYGLVEAYVQNKEL 290 (499)
T ss_dssp GEEECCCCBCTTTSSSCCCHHHHHHHHHHHHHHSCGGGTTSCEEEECSCCCGGGCHHHHHHHHHTCHHH
T ss_pred CeEEECCCcChhhcCccchhhhHHHHHHHhcccccccCCCCcEEEEeecCccccCHHHHHHHHHHHHHh
Confidence 7999999999887753211 0 112257999999999999999999999998653
No 5
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.54 E-value=1.5e-13 Score=127.15 Aligned_cols=78 Identities=12% Similarity=0.020 Sum_probs=63.8
Q ss_pred cCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccCCC-----------CCCCCCEEEEEcCcccccChHHH
Q 022054 220 SCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLE-----------RSTEYPAIISVAQFRPEKVRYKL 287 (303)
Q Consensus 220 ~~ad~viaNS~~t~~~i~~~~~~-~~~~~VIYPPvd~~~~~~~~~~-----------~~~~~~~iLsvgRl~p~Kn~~ll 287 (303)
+.+|.++++|+++++.+.+.||. ..++.|+||++|.+.+...+.. -....+.++++||+.++||++.+
T Consensus 135 ~~~d~ii~~s~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~l 214 (374)
T 2iw1_A 135 GKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRS 214 (374)
T ss_dssp TCCCEEEESCHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHHHHHHTTCCTTCEEEEEECSCTTTTTHHHH
T ss_pred cCCcEEEEcCHHHHHHHHHHhCCChhheEEecCCcCHHhcCcccchhHHHHHHHHhCCCCCCeEEEEeccchhhcCHHHH
Confidence 37999999999999999999987 5689999999998877532110 01225789999999999999999
Q ss_pred HHHHHHcccC
Q 022054 288 ISTRHILFNL 297 (303)
Q Consensus 288 I~Afa~L~~~ 297 (303)
++|++.+.++
T Consensus 215 i~a~~~l~~~ 224 (374)
T 2iw1_A 215 IEALASLPES 224 (374)
T ss_dssp HHHHHTSCHH
T ss_pred HHHHHHhHhc
Confidence 9999998654
No 6
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.50 E-value=3.9e-13 Score=125.61 Aligned_cols=216 Identities=12% Similarity=0.042 Sum_probs=125.2
Q ss_pred cCCCCcEEEEEcCCCC-CCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEcccc
Q 022054 30 RRNRTTSVAFFHPNTN-DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRR 108 (303)
Q Consensus 30 ~~~~~~rVa~~hp~l~-~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~ 108 (303)
+...+|||+|+.++.. ..||+|+++.+++++|.+.+ +++.+++...+.. ...+ +.. ... +++.+...
T Consensus 16 ~~~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G--~~V~v~~~~~~~~------~~~~-~~~-~~~--~~~~~~~~ 83 (406)
T 2gek_A 16 PRGSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAG--HEVSVLAPASPHV------KLPD-YVV-SGG--KAVPIPYN 83 (406)
T ss_dssp -----CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTT--CEEEEEESCCTTS------CCCT-TEE-ECC--CCC-----
T ss_pred cCCCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCC--CeEEEEecCCccc------cCCc-ccc-cCC--cEEecccc
Confidence 3456799999998763 34999999999999999985 5667777543111 0000 000 000 11111100
Q ss_pred ceeecccCCchhhhhHHHHHHHHHHHHHhccCCcEEEeCCCcccccce--eeccCCeEEEEeecCCcchHHHhhhhcccc
Q 022054 109 KWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPL--ARIFGCRVICYTHYPTISLDMISRVREGSS 186 (303)
Q Consensus 109 ~~~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~pDv~i~t~~~~~~~pl--a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~ 186 (303)
... ..+..... ......+.+++.+||+++........... ++..+.|.+.++|......
T Consensus 84 ~~~-----~~~~~~~~---~~~~l~~~l~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~----------- 144 (406)
T 2gek_A 84 GSV-----ARLRFGPA---THRKVKKWIAEGDFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTSTTKS----------- 144 (406)
T ss_dssp ------------CCHH---HHHHHHHHHHHHCCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCCCSH-----------
T ss_pred CCc-----ccccccHH---HHHHHHHHHHhcCCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcchhh-----------
Confidence 000 00000000 11123344667799977754433322221 2234789999999854100
Q ss_pred ccCchhhhhhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCCC--
Q 022054 187 MYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE-- 264 (303)
Q Consensus 187 ~~~~~~~~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~~~~~~-- 264 (303)
.....+.+. .+...+.+|.++++|+++++.+.+.++. .++ ||+|++|.+.+...+..
T Consensus 145 ---------------~~~~~~~~~----~~~~~~~~d~ii~~s~~~~~~~~~~~~~-~~~-vi~~~v~~~~~~~~~~~~~ 203 (406)
T 2gek_A 145 ---------------LTLSVFQGI----LRPYHEKIIGRIAVSDLARRWQMEALGS-DAV-EIPNGVDVASFADAPLLDG 203 (406)
T ss_dssp ---------------HHHHHHHST----THHHHTTCSEEEESSHHHHHHHHHHHSS-CEE-ECCCCBCHHHHHTCCCCTT
T ss_pred ---------------hhHHHHHHH----HHHHHhhCCEEEECCHHHHHHHHHhcCC-CcE-EecCCCChhhcCCCchhhh
Confidence 001111111 1245589999999999999999998873 567 99999998766432111
Q ss_pred CCCCCCEEEEEcCc-ccccChHHHHHHHHHcccC
Q 022054 265 RSTEYPAIISVAQF-RPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 265 ~~~~~~~iLsvgRl-~p~Kn~~llI~Afa~L~~~ 297 (303)
.+...+.++++||+ .++|+++.+|+|++.+.++
T Consensus 204 ~~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~ 237 (406)
T 2gek_A 204 YPREGRTVLFLGRYDEPRKGMAVLLAALPKLVAR 237 (406)
T ss_dssp CSCSSCEEEEESCTTSGGGCHHHHHHHHHHHHTT
T ss_pred ccCCCeEEEEEeeeCccccCHHHHHHHHHHHHHH
Confidence 11124799999999 9999999999999999765
No 7
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.49 E-value=2.1e-13 Score=127.83 Aligned_cols=207 Identities=13% Similarity=0.041 Sum_probs=119.6
Q ss_pred CCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccceeecccCCchhhhhHH
Q 022054 46 DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQS 125 (303)
Q Consensus 46 ~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~~~~~~~~~~~l~~~~ 125 (303)
..||+|+++.+++++|.+.+ +++.+++...+.. . . . ..+.+.+..+...... ....+.. .
T Consensus 25 ~~GG~~~~~~~la~~L~~~G--~~V~v~~~~~~~~---~-~--~------~~~~i~~~~~~~~~~~-~~~~~~~-----~ 84 (394)
T 2jjm_A 25 SVGGSGVVGTELGKQLAERG--HEIHFITSGLPFR---L-N--K------VYPNIYFHEVTVNQYS-VFQYPPY-----D 84 (394)
T ss_dssp --CHHHHHHHHHHHHHHHTT--CEEEEECSSCC----------C------CCTTEEEECCCCC-----CCSCCH-----H
T ss_pred CCCCHHHHHHHHHHHHHhCC--CEEEEEeCCCCCc---c-c--c------cCCceEEEeccccccc-ccccccc-----c
Confidence 46999999999999999985 5667777543110 0 0 0 0111112222111000 0000101 1
Q ss_pred HHHHHHHHHHHhccCCcEEEeCCCcccccc--eee-cc--CCeEEEEeecCCcchHHHhhhhccccccCchhhhhhchhh
Q 022054 126 FGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LAR-IF--GCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWL 200 (303)
Q Consensus 126 l~~~~~~~~~l~~~~pDv~i~t~~~~~~~p--la~-~~--~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (303)
+.......+.+++.+||+++.........+ ++. .. +.|++..+|.... . . +.. .
T Consensus 85 ~~~~~~l~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~-----~-~------~~~------~--- 143 (394)
T 2jjm_A 85 LALASKMAEVAQRENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDI-----T-V------LGS------D--- 143 (394)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHH-----H-T------TTT------C---
T ss_pred HHHHHHHHHHHHHcCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcc-----c-c------cCC------C---
Confidence 111222344567789998886543322222 222 22 5899999997441 0 0 000 0
Q ss_pred hHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCC-------CCCCCCCEEE
Q 022054 201 SQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL-------ERSTEYPAII 273 (303)
Q Consensus 201 ~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~~~~~-------~~~~~~~~iL 273 (303)
...+. +.+...+.+|.++++|+++++.+.+.++.+.++.||||++|.+.+...+. .-...+..++
T Consensus 144 ~~~~~--------~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~~~~i~ 215 (394)
T 2jjm_A 144 PSLNN--------LIRFGIEQSDVVTAVSHSLINETHELVKPNKDIQTVYNFIDERVYFKRDMTQLKKEYGISESEKILI 215 (394)
T ss_dssp TTTHH--------HHHHHHHHSSEEEESCHHHHHHHHHHTCCSSCEEECCCCCCTTTCCCCCCHHHHHHTTCC---CEEE
T ss_pred HHHHH--------HHHHHHhhCCEEEECCHHHHHHHHHhhCCcccEEEecCCccHHhcCCcchHHHHHHcCCCCCCeEEE
Confidence 00111 12334477999999999999999999875468999999999887753110 0002257999
Q ss_pred EEcCcccccChHHHHHHHHHcccCCCCC
Q 022054 274 SVAQFRPEKVRYKLISTRHILFNLRHFQ 301 (303)
Q Consensus 274 svgRl~p~Kn~~llI~Afa~L~~~~~~~ 301 (303)
++||+.++|+++.+|+|++.+.++..++
T Consensus 216 ~~G~~~~~Kg~~~li~a~~~l~~~~~~~ 243 (394)
T 2jjm_A 216 HISNFRKVKRVQDVVQAFAKIVTEVDAK 243 (394)
T ss_dssp EECCCCGGGTHHHHHHHHHHHHHSSCCE
T ss_pred EeeccccccCHHHHHHHHHHHHhhCCCE
Confidence 9999999999999999999987653333
No 8
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.46 E-value=1.7e-12 Score=119.20 Aligned_cols=172 Identities=15% Similarity=0.012 Sum_probs=117.6
Q ss_pred CcEEEEEcCC--------C-----CCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCC
Q 022054 34 TTSVAFFHPN--------T-----NDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPP 100 (303)
Q Consensus 34 ~~rVa~~hp~--------l-----~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~ 100 (303)
+|||+++.+. + ...||+|+++.+++++|.+.+ +++.+++...+... .+.+
T Consensus 3 ~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G--~~v~v~~~~~~~~~---------------~~~~ 65 (342)
T 2iuy_A 3 PLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELG--HEVFLLGAPGSPAG---------------RPGL 65 (342)
T ss_dssp CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTT--CEEEEESCTTSCCC---------------STTE
T ss_pred ccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcC--CeEEEEecCCCCCC---------------CCcc
Confidence 5899999988 2 246999999999999999975 56677775431110 0011
Q ss_pred eEEEccccceeecccCCchhhhhHHHHHHHHHHHHHhccCCcEEEeCCCcccccceeeccCCeEEEEeecCCcchHHHhh
Q 022054 101 KVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISR 180 (303)
Q Consensus 101 ~~i~L~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~pDv~i~t~~~~~~~pla~~~~~~~i~Y~H~P~~s~~~~~~ 180 (303)
++.. .+. . ....+.+++.+||+++....... ...+...+.| +..+|....
T Consensus 66 ~~~~-----------~~~---~-------~~l~~~l~~~~~Dvi~~~~~~~~-~~~~~~~~~p-v~~~h~~~~------- 115 (342)
T 2iuy_A 66 TVVP-----------AGE---P-------EEIERWLRTADVDVVHDHSGGVI-GPAGLPPGTA-FISSHHFTT------- 115 (342)
T ss_dssp EECS-----------CCS---H-------HHHHHHHHHCCCSEEEECSSSSS-CSTTCCTTCE-EEEEECSSS-------
T ss_pred eecc-----------CCc---H-------HHHHHHHHhcCCCEEEECCchhh-HHHHhhcCCC-EEEecCCCC-------
Confidence 1111 000 0 12334466789998886654321 1123345789 999998651
Q ss_pred hhccccccCchhhhhhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccc
Q 022054 181 VREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQV 260 (303)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~~ 260 (303)
.. ..+|.++++|+++++.+.+ + .++.||||++|.+.+..
T Consensus 116 -------~~------------------------------~~~d~ii~~S~~~~~~~~~--~--~~~~vi~ngvd~~~~~~ 154 (342)
T 2iuy_A 116 -------RP------------------------------VNPVGCTYSSRAQRAHCGG--G--DDAPVIPIPVDPARYRS 154 (342)
T ss_dssp -------BC------------------------------SCCTTEEESCHHHHHHTTC--C--TTSCBCCCCBCGGGSCC
T ss_pred -------Cc------------------------------ccceEEEEcCHHHHHHHhc--C--CceEEEcCCCChhhcCc
Confidence 00 1189999999999999988 4 78999999999887763
Q ss_pred cCCCCCCCCCEEEEEcCcccccChHHHHHHHHHc
Q 022054 261 LPLERSTEYPAIISVAQFRPEKVRYKLISTRHIL 294 (303)
Q Consensus 261 ~~~~~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L 294 (303)
.+.. ..++++++++||+.++||++.+|+|++.+
T Consensus 155 ~~~~-~~~~~~i~~vG~~~~~Kg~~~li~a~~~~ 187 (342)
T 2iuy_A 155 AADQ-VAKEDFLLFMGRVSPHKGALEAAAFAHAC 187 (342)
T ss_dssp STTC-CCCCSCEEEESCCCGGGTHHHHHHHHHHH
T ss_pred cccc-CCCCCEEEEEeccccccCHHHHHHHHHhc
Confidence 2111 11257899999999999999999999987
No 9
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.46 E-value=1.1e-12 Score=123.64 Aligned_cols=212 Identities=12% Similarity=0.082 Sum_probs=119.0
Q ss_pred hccCCCCcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccc
Q 022054 28 NARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYR 107 (303)
Q Consensus 28 ~~~~~~~~rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~ 107 (303)
..+.-++|||+++.+.. .+||+|+++.+++++|.+.+ +++.+++... + +...+... .+...+.+ .+.+.+
T Consensus 34 ~~~~~~~mkIl~v~~~~-~~GG~~~~~~~l~~~L~~~G--~~v~v~~~~~--~-~~~~~~~~-~~~~~~~~-~~~~~~-- 103 (416)
T 2x6q_A 34 KAEKLKGRSFVHVNSTS-FGGGVAEILHSLVPLLRSIG--IEARWFVIEG--P-TEFFNVTK-TFHNALQG-NESLKL-- 103 (416)
T ss_dssp HHHTTTTCEEEEEESCS-SSSTHHHHHHHHHHHHHHTT--CEEEEEECCC--C-HHHHHHHH-HHHHHHTT-CCSCCC--
T ss_pred hhhhhhccEEEEEeCCC-CCCCHHHHHHHHHHHHHhCC--CeEEEEEccC--C-cchhhhhc-ccceeecc-cccccc--
Confidence 34455789999999998 68999999999999999986 4555555432 1 11111000 00000100 000000
Q ss_pred cceeecccCCchhhhhHHHH-HHHHHHHHHhccCCcEEEeCCCcccccceeeccCCeEEEEeecCCcchHHHhhhhcccc
Q 022054 108 RKWIEESTYPRFTMIGQSFG-SVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSS 186 (303)
Q Consensus 108 ~~~~~~~~~~~~~l~~~~l~-~~~~~~~~l~~~~pDv~i~t~~~~~~~pla~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~ 186 (303)
+. . .+..+. ......+.+++.+||+++...............+.|++.++|.... .
T Consensus 104 ---------~~-~-~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~p~v~~~h~~~~-~----------- 160 (416)
T 2x6q_A 104 ---------TE-E-MKELYLNVNRENSKFIDLSSFDYVLVHDPQPAALIEFYEKKSPWLWRCHIDLS-S----------- 160 (416)
T ss_dssp ---------CH-H-HHHHHHHHHHHHHHSSCGGGSSEEEEESSTTGGGGGGSCCCSCEEEECCSCCS-S-----------
T ss_pred ---------cH-H-HHHHHHHHHHHHHHHHhhcCCCEEEEeccchhhHHHHHHhcCCEEEEEccccC-C-----------
Confidence 00 0 011111 1111233356678998876544332222111123789999997541 0
Q ss_pred ccCchhhhhhchhhhHhHHHHHHHHHHHHHHhccCCcEE-EEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCC--
Q 022054 187 MYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLA-MVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL-- 263 (303)
Q Consensus 187 ~~~~~~~~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~v-iaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~~~~~-- 263 (303)
. . + .+++.+ ++...++|.+ +++|++.++. +. ..++.||||++|.+.+...+.
T Consensus 161 --~----------~---~-~~~~~~----~~~~~~~~~~i~~~s~~~~~~----~~-~~~~~vi~ngvd~~~~~~~~~~~ 215 (416)
T 2x6q_A 161 --P----------N---R-EFWEFL----RRFVEKYDRYIFHLPEYVQPE----LD-RNKAVIMPPSIDPLSEKNVELKQ 215 (416)
T ss_dssp --C----------C---H-HHHHHH----HHHHTTSSEEEESSGGGSCTT----SC-TTTEEECCCCBCTTSTTTSCCCH
T ss_pred --c----------c---H-HHHHHH----HHHHHhCCEEEEechHHHHhh----CC-ccceEEeCCCCChhhhcccccCh
Confidence 0 0 0 111222 2223455655 5888877652 22 368899999999876642110
Q ss_pred ----------CCCCCCCEEEEEcCcccccChHHHHHHHHHcccC
Q 022054 264 ----------ERSTEYPAIISVAQFRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 264 ----------~~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~~ 297 (303)
.-....++++++||+.++||++.+|+|++.+.++
T Consensus 216 ~~~~~~r~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~ 259 (416)
T 2x6q_A 216 TEILRILERFDVDPEKPIITQVSRFDPWKGIFDVIEIYRKVKEK 259 (416)
T ss_dssp HHHHHHHHHTTCCTTSCEEEEECCCCTTSCHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHhCCCCCCcEEEEEeccccccCHHHHHHHHHHHHHh
Confidence 0012257999999999999999999999998754
No 10
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=99.44 E-value=6.6e-13 Score=125.00 Aligned_cols=201 Identities=11% Similarity=-0.005 Sum_probs=120.7
Q ss_pred cEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccceeecc
Q 022054 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (303)
Q Consensus 35 ~rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~~~~~ 114 (303)
|||+|+.+.....||+|+++.+++++|.+. + ++.+++.... +.................+ ..
T Consensus 1 MkI~~v~~~~p~~gG~~~~~~~l~~~L~~~-~--~V~v~~~~~~--------------g~~~~~~~~~~~~~~~~~~-~~ 62 (413)
T 3oy2_A 1 MKLIIVGAHSSVPSGYGRVMRAIVPRISKA-H--EVIVFGIHAF--------------GRSVHANIEEFDAQTAEHV-RG 62 (413)
T ss_dssp CEEEEEEECTTCCSHHHHHHHHHHHHHTTT-S--EEEEEEESCC--------------SCCSCSSSEEEEHHHHHHH-TT
T ss_pred CeEEEecCCCCCCCCHHHHHHHHHHHHHhc-C--CeEEEeecCC--------------CcccccccccCCccccccc-cc
Confidence 799999998878899999999999999887 4 4556654321 0000000000000000000 00
Q ss_pred cCCchhhhhHHHHHHHHHHHHHhccCCcEEEeCCCcccccce-eecc----CCeEEEEeecCCcchHHHhhhhccccccC
Q 022054 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPL-ARIF----GCRVICYTHYPTISLDMISRVREGSSMYN 189 (303)
Q Consensus 115 ~~~~~~l~~~~l~~~~~~~~~l~~~~pDv~i~t~~~~~~~pl-a~~~----~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~ 189 (303)
+......+ ....+.+++.+||+++.........+. +... ..+.+.++|... .. .
T Consensus 63 -~~~~~~~~------~~l~~~l~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~--------~ 121 (413)
T 3oy2_A 63 -LNEQGFYY------SGLSEFIDVHKPDIVMIYNDPIVIGNYLLAMGKCSHRTKIVLYVDLVS------KN--------I 121 (413)
T ss_dssp -CCSTTCCH------HHHHHHHHHHCCSEEEEEECHHHHHHHHHHGGGCCSCCEEEEEECCCS------BS--------C
T ss_pred -cccccchH------HHHHHHHHhcCCCEEEEcchHHHHHHHHHHhccCCCCCceeeeccccc------hh--------h
Confidence 00001111 112344677899987755322222221 1122 245577777643 00 0
Q ss_pred chhhhhhchhhhHhHHHHHHHHHHHHHHhccCCc--EEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCccccc----CC
Q 022054 190 NNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCAD--LAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVL----PL 263 (303)
Q Consensus 190 ~~~~~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad--~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~~~----~~ 263 (303)
... .++..+++| .++++|+++++.+.+ +|.+.++.|||||+|.+.+... ..
T Consensus 122 ----------~~~------------~~~~~~~~~~~~ii~~S~~~~~~~~~-~~~~~~~~vi~ngvd~~~~~~~~~~~~~ 178 (413)
T 3oy2_A 122 ----------REN------------LWWIFSHPKVVGVMAMSKCWISDICN-YGCKVPINIVSHFVDTKTIYDARKLVGL 178 (413)
T ss_dssp ----------CGG------------GGGGGGCTTEEEEEESSTHHHHHHHH-TTCCSCEEECCCCCCCCCCTTHHHHTTC
T ss_pred ----------HHH------------HHHHHhccCCceEEEcCHHHHHHHHH-cCCCCceEEeCCCCCHHHHHHHHHhcCC
Confidence 000 134457778 999999999999999 6655789999999999877421 11
Q ss_pred CCCCCCCEEEEEcCcccccChHHHHHHHHHcccC
Q 022054 264 ERSTEYPAIISVAQFRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 264 ~~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~~ 297 (303)
........++++||+.++|+++.+|+|++.+.++
T Consensus 179 ~~~~~~~~il~vGr~~~~Kg~~~li~a~~~l~~~ 212 (413)
T 3oy2_A 179 SEYNDDVLFLNMNRNTARKRLDIYVLAAARFISK 212 (413)
T ss_dssp GGGTTSEEEECCSCSSGGGTHHHHHHHHHHHHHH
T ss_pred CcccCceEEEEcCCCchhcCcHHHHHHHHHHHHh
Confidence 1111257899999999999999999999998654
No 11
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=99.38 E-value=1.1e-11 Score=119.40 Aligned_cols=81 Identities=14% Similarity=0.013 Sum_probs=63.1
Q ss_pred HhccCCcEEEEcCHHHHHHHHHH-hCC---------C--CCceEEcCCCCCCcccccCC---------------------
Q 022054 217 LVGSCADLAMVNSSWTQSHIEKL-WGI---------P--DRIKRVYPPCDTSGLQVLPL--------------------- 263 (303)
Q Consensus 217 ~~~~~ad~viaNS~~t~~~i~~~-~~~---------~--~~~~VIYPPvd~~~~~~~~~--------------------- 263 (303)
...+.+|.++++|+.+++.+.+. +|. + .++.||||++|.+.+.....
T Consensus 200 ~~~~~ad~vi~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (485)
T 2qzs_A 200 AGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQ 279 (485)
T ss_dssp HHHHHCSEEEESSHHHHHHTTSHHHHTTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHH
T ss_pred HHHHhcCeEEecCHHHHHHHhccccCcchHHHHHhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHH
Confidence 34467999999999999999876 552 1 68999999999887752110
Q ss_pred -------CCCCCCCEEEEEcCcccccChHHHHHHHHHcccC
Q 022054 264 -------ERSTEYPAIISVAQFRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 264 -------~~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~~ 297 (303)
......+.++++||+.++||++.+|+|++.+.+.
T Consensus 280 ~r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~ 320 (485)
T 2qzs_A 280 LQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQ 320 (485)
T ss_dssp HHHHHTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHHT
T ss_pred HHHHcCCCCCCCCeEEEEeccCccccCHHHHHHHHHHHhhC
Confidence 0001257999999999999999999999998653
No 12
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=99.38 E-value=2.1e-12 Score=124.44 Aligned_cols=82 Identities=10% Similarity=-0.036 Sum_probs=63.2
Q ss_pred HHhccCCcEEEEcCHHHHHHHHHH-hC--------C-CCCceEEcCCCCCCcccccCCC---------------------
Q 022054 216 GLVGSCADLAMVNSSWTQSHIEKL-WG--------I-PDRIKRVYPPCDTSGLQVLPLE--------------------- 264 (303)
Q Consensus 216 ~~~~~~ad~viaNS~~t~~~i~~~-~~--------~-~~~~~VIYPPvd~~~~~~~~~~--------------------- 264 (303)
+...+.+|.++++|+.+++.+.+. || . +.++.||||++|.+.+......
T Consensus 201 ~~~~~~ad~vi~~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (485)
T 1rzu_A 201 KGGLQTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAV 280 (485)
T ss_dssp HHHHHHCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHH
T ss_pred HHHHhhcCEEEecCHhHHHHHhccccCcchHHHHHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHH
Confidence 334467999999999999999885 44 2 4689999999998877521100
Q ss_pred ------CCCCCCEEEEEcCcccccChHHHHHHHHHcccC
Q 022054 265 ------RSTEYPAIISVAQFRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 265 ------~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~~ 297 (303)
..+.+++++++||+.++||++.+|+|++.+.+.
T Consensus 281 r~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~ 319 (485)
T 1rzu_A 281 AEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSL 319 (485)
T ss_dssp HHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHHT
T ss_pred HHhcCCCCCCCeEEEEEccCccccCHHHHHHHHHHHHhc
Confidence 001146899999999999999999999998653
No 13
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=99.23 E-value=8.6e-11 Score=121.09 Aligned_cols=243 Identities=13% Similarity=0.043 Sum_probs=131.1
Q ss_pred cCCCCcEEEEEcCCC----------CCCChHHHHHHH--------HHHHHHHhCCCC--eEEEEeccCCCChhHHHHhhh
Q 022054 30 RRNRTTSVAFFHPNT----------NDGGGGERVLWC--------AVKAIQEESPDL--DCIVYTGDHDAFPDSLLARAV 89 (303)
Q Consensus 30 ~~~~~~rVa~~hp~l----------~~~GGaErv~~~--------la~aL~~~~~~~--~~~v~t~~~~~~~~~~~~~~~ 89 (303)
|.+..++|+++.++- ...||-+.++++ |+++|.+.|.++ ++.|+|...+... .
T Consensus 274 ~~~~~~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~~-------g 346 (816)
T 3s28_A 274 RVPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAV-------G 346 (816)
T ss_dssp HSCCCCEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTCT-------T
T ss_pred cCCceeEEEEEcCCcccCccccCCCCCCCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCCCCCC-------C
Confidence 345578999999865 246898999996 555556667655 3568886531110 0
Q ss_pred hccCcc---cc--CCCeEEEccccc--eeecccCCchhhhhHHHHHHH-HHHHH-Hh--ccCCcEEEeCCCcccccce--
Q 022054 90 DRFGVE---LL--HPPKVVHLYRRK--WIEESTYPRFTMIGQSFGSVY-LSWEA-LC--KFTPLYYFDTSGYAFTYPL-- 156 (303)
Q Consensus 90 ~~~~~~---l~--~~~~~i~L~~~~--~~~~~~~~~~~l~~~~l~~~~-~~~~~-l~--~~~pDv~i~t~~~~~~~pl-- 156 (303)
+.++.. +. +.++++.+..+. ...+...++.. +|..+..+. .+.+. ++ ..+|||++.....+...+.
T Consensus 347 ~~y~~~~e~i~~~~gv~I~RvP~~~~~g~l~~~l~k~~-L~~~L~~F~~~~l~~il~~~~~~PDVIHsH~~~sglva~ll 425 (816)
T 3s28_A 347 TTCGERLERVYDSEYCDILRVPFRTEKGIVRKWISRFE-VWPYLETYTEDAAVELSKELNGKPDLIIGNYSDGNLVASLL 425 (816)
T ss_dssp SSTTSSEEECTTCSSEEEEEECEEETTEEECSCCCTTT-CGGGHHHHHHHHHHHHHHHCSSCCSEEEEEHHHHHHHHHHH
T ss_pred CccCCcceeecCcCCeEEEEecCCCccccccccccHHH-HHHHHHHHHHHHHHHHHHhcCCCCeEEEeCCchHHHHHHHH
Confidence 111111 11 233444332211 00011111222 222222121 11222 22 3479998854322222221
Q ss_pred eeccCCeEEEEeecCCcchHHHhhhhccccccCchhhhhhchhhhHhHHHHHHHHH-HHHHHhccCCcEEEEcCHHHHHH
Q 022054 157 ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFS-WMYGLVGSCADLAMVNSSWTQSH 235 (303)
Q Consensus 157 a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~-~l~~~~~~~ad~viaNS~~t~~~ 235 (303)
+...+.|.|...|.... . . +... ... .......|..... ...+.+++.||.|||+|+..++.
T Consensus 426 ar~~gvP~V~T~Hsl~~-~---k--------~~~~----~~~-~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~~~~~ 488 (816)
T 3s28_A 426 AHKLGVTQCTIAHALEK-T---K--------YPDS----DIY-WKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAG 488 (816)
T ss_dssp HHHHTCCEEEECSCCHH-H---H--------STTT----TTT-HHHHHHHHCHHHHHHHHHHHHHHSSEEEESCHHHHHC
T ss_pred HHHcCCCEEEEEecccc-c---c--------cccc----cch-hhhHHHHHHHHHHHHHHHHHHHhCCEEEECCHHHHHH
Confidence 23458899999997430 0 0 0000 000 0111111211111 12445678999999999999997
Q ss_pred HHHHhCC----------------------CCCceEEcCCCCCCcccccCCC----------------------------C
Q 022054 236 IEKLWGI----------------------PDRIKRVYPPCDTSGLQVLPLE----------------------------R 265 (303)
Q Consensus 236 i~~~~~~----------------------~~~~~VIYPPvd~~~~~~~~~~----------------------------~ 265 (303)
+.+.++. ..++.||+|.||.+.|...... .
T Consensus 489 l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r~~lg~l~ 568 (816)
T 3s28_A 489 SKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLK 568 (816)
T ss_dssp CSSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCBTTEESCBS
T ss_pred HHHHHHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHHcCccchhhhhhhhccccccccccchhhHHHHhcccC
Confidence 5443221 1289999999999888531100 0
Q ss_pred CCCCCEEEEEcCcccccChHHHHHHHHHcccC
Q 022054 266 STEYPAIISVAQFRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 266 ~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~~ 297 (303)
....++++++||+.++||++.+|+|++.+++.
T Consensus 569 ~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~ 600 (816)
T 3s28_A 569 DKKKPILFTMARLDRVKNLSGLVEWYGKNTRL 600 (816)
T ss_dssp CTTSCEEEEECCCCTTTTHHHHHHHHHHCHHH
T ss_pred CCCCeEEEEEccCcccCCHHHHHHHHHHHHhh
Confidence 22357999999999999999999999998753
No 14
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=99.10 E-value=6e-10 Score=106.37 Aligned_cols=79 Identities=10% Similarity=0.016 Sum_probs=58.4
Q ss_pred HhccCCc--EEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccCCCCCCCCCEEEEEcCc-ccccChHHHHHHHH
Q 022054 217 LVGSCAD--LAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQF-RPEKVRYKLISTRH 292 (303)
Q Consensus 217 ~~~~~ad--~viaNS~~t~~~i~~~~~~-~~~~~VIYPPvd~~~~~~~~~~~~~~~~~iLsvgRl-~p~Kn~~llI~Afa 292 (303)
..++.++ .+||||+++++.+++. |. ..++.+++|++|.+.+..... ....++.++++||+ .++|+++.+|+||+
T Consensus 188 ~~~~~~~~~~vi~~S~~~~~~l~~~-g~~~~~~~~i~~g~d~~~~~~~~~-~~~~~~~il~~gr~~~~~Kg~~~li~A~~ 265 (413)
T 2x0d_A 188 STYKYRGPQIAVFNSELLKQYFNNK-GYNFTDEYFFQPKINTTLKNYIND-KRQKEKIILVYGRPSVKRNAFTLIVEALK 265 (413)
T ss_dssp HTTSCCSCEEEEEESHHHHHHHHHH-TCCCSEEEEECCCCCHHHHTTTTS-CCCCCSEEEEEECTTCGGGCHHHHHHHHH
T ss_pred HHhccCCceEEEEcCHHHHHHHHHc-CCCCCceEEeCCCcCchhhccccc-ccCCCCEEEEEecCchhccCHHHHHHHHH
Confidence 3445554 6999999999999986 43 356889999998765431111 11225789999997 68999999999999
Q ss_pred HcccC
Q 022054 293 ILFNL 297 (303)
Q Consensus 293 ~L~~~ 297 (303)
.+.++
T Consensus 266 ~l~~~ 270 (413)
T 2x0d_A 266 IFVQK 270 (413)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 98654
No 15
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=98.96 E-value=3.2e-09 Score=97.82 Aligned_cols=198 Identities=10% Similarity=0.016 Sum_probs=110.8
Q ss_pred cEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccceeecc
Q 022054 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (303)
Q Consensus 35 ~rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~~~~~ 114 (303)
|||.++. . +.||.++.+.+++++|.+.+ +++.+++.... ... ..+++ .+. ++..+.........
T Consensus 7 mkIl~~~--~-~~gG~~~~~~~la~~L~~~G--~~V~v~~~~~~-~~~---~~~~~-~g~------~~~~~~~~~~~~~~ 70 (364)
T 1f0k_A 7 KRLMVMA--G-GTGGHVFPGLAVAHHLMAQG--WQVRWLGTADR-MEA---DLVPK-HGI------EIDFIRISGLRGKG 70 (364)
T ss_dssp CEEEEEC--C-SSHHHHHHHHHHHHHHHTTT--CEEEEEECTTS-THH---HHGGG-GTC------EEEECCCCCCTTCC
T ss_pred cEEEEEe--C-CCccchhHHHHHHHHHHHcC--CEEEEEecCCc-chh---hhccc-cCC------ceEEecCCccCcCc
Confidence 7999996 3 46899999999999998875 56677775431 111 11111 122 23222211000000
Q ss_pred cCCchhhhhHHHHHHHHHHHHHhccCCcEEEeCCCcccccc-e-eeccCCeEEEEeecCCcchHHHhhhhccccccCchh
Q 022054 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-L-ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (303)
Q Consensus 115 ~~~~~~l~~~~l~~~~~~~~~l~~~~pDv~i~t~~~~~~~p-l-a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~ 192 (303)
....+...+..+..+....+.+++.+||+++.......... + ++..+.|++...|... .
T Consensus 71 ~~~~~~~~~~~~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~-~------------------ 131 (364)
T 1f0k_A 71 IKALIAAPLRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGI-A------------------ 131 (364)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSS-C------------------
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCCC-C------------------
Confidence 00000111122222223345577789998887654322211 2 2346789887777532 0
Q ss_pred hhhhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccC----CCCCCC
Q 022054 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLP----LERSTE 268 (303)
Q Consensus 193 ~~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~~~~----~~~~~~ 268 (303)
+.. .++..+.+|.+++.|+.+ +. ++.|++||++.+.+.... +.....
T Consensus 132 --------~~~-----------~~~~~~~~d~v~~~~~~~-------~~---~~~~i~n~v~~~~~~~~~~~~~~~~~~~ 182 (364)
T 1f0k_A 132 --------GLT-----------NKWLAKIATKVMQAFPGA-------FP---NAEVVGNPVRTDVLALPLPQQRLAGREG 182 (364)
T ss_dssp --------CHH-----------HHHHTTTCSEEEESSTTS-------SS---SCEECCCCCCHHHHTSCCHHHHHTTCCS
T ss_pred --------cHH-----------HHHHHHhCCEEEecChhh-------cC---CceEeCCccchhhcccchhhhhcccCCC
Confidence 000 112346799999998764 42 678999999876553210 111111
Q ss_pred CCEE-EEEcCcccccChHHHHHHHHHccc
Q 022054 269 YPAI-ISVAQFRPEKVRYKLISTRHILFN 296 (303)
Q Consensus 269 ~~~i-LsvgRl~p~Kn~~llI~Afa~L~~ 296 (303)
++++ ++.||+.++|+++.+++|++.+.+
T Consensus 183 ~~~il~~~g~~~~~k~~~~li~a~~~l~~ 211 (364)
T 1f0k_A 183 PVRVLVVGGSQGARILNQTMPQVAAKLGD 211 (364)
T ss_dssp SEEEEEECTTTCCHHHHHHHHHHHHHHGG
T ss_pred CcEEEEEcCchHhHHHHHHHHHHHHHhcC
Confidence 3444 466799999999999999999864
No 16
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=98.87 E-value=1.4e-07 Score=93.05 Aligned_cols=81 Identities=12% Similarity=-0.006 Sum_probs=63.6
Q ss_pred HhccCCcEEEEcCHHHHHHHHHHhCC---------CCCceEEcCCCCCCccccc-----CC-------------------
Q 022054 217 LVGSCADLAMVNSSWTQSHIEKLWGI---------PDRIKRVYPPCDTSGLQVL-----PL------------------- 263 (303)
Q Consensus 217 ~~~~~ad~viaNS~~t~~~i~~~~~~---------~~~~~VIYPPvd~~~~~~~-----~~------------------- 263 (303)
..+..||.|+|+|...+++|.+.++. ..++.+|+|.||++.+... +.
T Consensus 237 ~~i~~ad~v~tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k~~l~ 316 (536)
T 3vue_A 237 AGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQ 316 (536)
T ss_dssp HHHHHCSEEEESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHHHHHH
T ss_pred HHHHhccEEEEcCHHHhhhhhcccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHHHHHH
Confidence 34457999999999999999887642 3579999999999877521 00
Q ss_pred -----CCCCCCCEEEEEcCcccccChHHHHHHHHHcccC
Q 022054 264 -----ERSTEYPAIISVAQFRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 264 -----~~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~~ 297 (303)
......+.|++|||++++|+++++|+|++++.++
T Consensus 317 ~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~ 355 (536)
T 3vue_A 317 AEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQE 355 (536)
T ss_dssp HHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTS
T ss_pred HhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhh
Confidence 0112357999999999999999999999998765
No 17
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=98.78 E-value=3.1e-09 Score=98.23 Aligned_cols=77 Identities=12% Similarity=0.055 Sum_probs=55.7
Q ss_pred cCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCC-CCCCcccccC-----C--CCCCCCCEEEEEcCcccc-cChHHHHH
Q 022054 220 SCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPP-CDTSGLQVLP-----L--ERSTEYPAIISVAQFRPE-KVRYKLIS 289 (303)
Q Consensus 220 ~~ad~viaNS~~t~~~i~~~~~~-~~~~~VIYPP-vd~~~~~~~~-----~--~~~~~~~~iLsvgRl~p~-Kn~~llI~ 289 (303)
+.+|.+++.|+.+++.+.+ +|. ++++.|++|| +|...+.... . ....++..++++||+.++ |+++.+|+
T Consensus 149 ~~~d~ii~~s~~~~~~~~~-~g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~~K~~~~li~ 227 (375)
T 3beo_A 149 VMADLHFSPTAKSATNLQK-ENKDESRIFITGNTAIDALKTTVKETYSHPVLEKLGNNRLVLMTAHRRENLGEPMRNMFR 227 (375)
T ss_dssp HHCSEEEESSHHHHHHHHH-TTCCGGGEEECCCHHHHHHHHHCCSSCCCHHHHTTTTSEEEEEECCCGGGTTHHHHHHHH
T ss_pred hhhheeeCCCHHHHHHHHH-cCCCcccEEEECChhHhhhhhhhhhhhhHHHHHhccCCCeEEEEecccccchhHHHHHHH
Confidence 3489999999999999987 476 5679999999 6654432110 0 001112346699999986 99999999
Q ss_pred HHHHcccC
Q 022054 290 TRHILFNL 297 (303)
Q Consensus 290 Afa~L~~~ 297 (303)
|++.+.++
T Consensus 228 a~~~l~~~ 235 (375)
T 3beo_A 228 AIKRLVDK 235 (375)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhh
Confidence 99998653
No 18
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.47 E-value=2.1e-06 Score=83.93 Aligned_cols=190 Identities=11% Similarity=0.044 Sum_probs=108.4
Q ss_pred CCCCcEEEEEcCCCCCCChHHHHHHHHHHH--HHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEcccc
Q 022054 31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKA--IQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRR 108 (303)
Q Consensus 31 ~~~~~rVa~~hp~l~~~GGaErv~~~la~a--L~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~ 108 (303)
+.+++||+++.+++ ..||+|+++.+++++ +.+. ++++.+++...+ ..+.....++.. + .+..+..
T Consensus 202 ~~~~~rI~~~~~~~-~~~g~~~~~~~l~~~L~~~~~--~~~v~~~~~~~~-~~~~~~~~~~~~-~-------~~~~~~~- 268 (568)
T 2vsy_A 202 SKGPLRVGFVSNGF-GAHPTGLLTVALFEALQRRQP--DLQMHLFATSGD-DGSTLRTRLAQA-S-------TLHDVTA- 268 (568)
T ss_dssp SSSCEEEEEEESCS-SSSHHHHHHHHHHHHHHHHCT--TEEEEEEESSCC-CSCHHHHHHHHT-S-------EEEECTT-
T ss_pred CCCCeEEEEECccc-ccChHHHHHHHHHhhccCCcc--cEEEEEEECCCC-CccHHHHHHHhc-C-------eEEECCC-
Confidence 46678999999999 578999999999999 5554 577788875321 111222222211 1 1222110
Q ss_pred ceeecccCCchhhhhHHHHHHHHHHHHHhccCCcEEEeCCCcccc--cceeeccCCeEEEEee-cCCcchHHHhhhhccc
Q 022054 109 KWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFT--YPLARIFGCRVICYTH-YPTISLDMISRVREGS 185 (303)
Q Consensus 109 ~~~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~pDv~i~t~~~~~~--~pla~~~~~~~i~Y~H-~P~~s~~~~~~~~~~~ 185 (303)
+ . .....+.+++.+||++++..++... .++......|++...| +|.. .
T Consensus 269 -------~---~--------~~~l~~~i~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---------- 319 (568)
T 2vsy_A 269 -------L---G--------HLATAKHIRHHGIDLLFDLRGWGGGGRPEVFALRPAPVQVNWLAYPGT-S---------- 319 (568)
T ss_dssp -------C---C--------HHHHHHHHHHTTCSEEEECSSCTTCSSCHHHHTCCSSEEEEESSSSSC-C----------
T ss_pred -------C---C--------HHHHHHHHHhCCCCEEEECCCCCCcchHHHHhcCCCceeEeeecCCcc-c----------
Confidence 0 0 1113345678899999976554322 2221112345544444 4430 0
Q ss_pred cccCchhhhhhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCccc----cc
Q 022054 186 SMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQ----VL 261 (303)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~----~~ 261 (303)
. .+ ...+..+|.++++|+..++ |+ +++.||++..+..... ..
T Consensus 320 ---~-------------~~-----------~~~~~~~d~~i~~s~~~~~-----~~--~~i~~ipn~~~~~~~~~~~~~~ 365 (568)
T 2vsy_A 320 ---G-------------AP-----------WMDYVLGDAFALPPALEPF-----YS--EHVLRLQGAFQPSDTSRVVAEP 365 (568)
T ss_dssp ---C-------------CT-----------TCCEEEECTTTSCTTTGGG-----CS--SEEEECSSCSCCCCTTCCCCCC
T ss_pred ---C-------------CC-----------CceEEEECCCcCCcccccC-----Cc--ceeEcCCCcCCCCCCCCCCCCC
Confidence 0 00 0011347888999987654 55 7888888744332211 00
Q ss_pred CCC---CCCCCCEEEEEcCcccccChHHHHHHHHHcccC
Q 022054 262 PLE---RSTEYPAIISVAQFRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 262 ~~~---~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~~ 297 (303)
+.. .-..+.+++++||+.+ |+++.+|+||+.+.++
T Consensus 366 ~~r~~~~~~~~~~v~~~g~~~~-K~~~~li~a~~~l~~~ 403 (568)
T 2vsy_A 366 PSRTQCGLPEQGVVLCCFNNSY-KLNPQSMARMLAVLRE 403 (568)
T ss_dssp CCTGGGTCCTTSCEEEECCCGG-GCCHHHHHHHHHHHHH
T ss_pred CCccccCCCCCCEEEEeCCccc-cCCHHHHHHHHHHHHh
Confidence 110 0112457889999999 9999999999998543
No 19
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.47 E-value=4.3e-07 Score=86.00 Aligned_cols=66 Identities=12% Similarity=-0.050 Sum_probs=50.6
Q ss_pred HHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCCCCCCCCCEEEEEcCcccccCh
Q 022054 215 YGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKVR 284 (303)
Q Consensus 215 ~~~~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~~~~~~~~~~~~~iLsvgRl~p~Kn~ 284 (303)
.++..+.+|.++++|+++++.+.+.. ++.||+|++|.+.+........+..+.++++||+.++||+
T Consensus 172 ~~~~~~~ad~vi~~S~~~~~~~~~~~----~i~vipngvd~~~f~~~~~~~~~~~~~i~~vGrl~~~Kg~ 237 (406)
T 2hy7_A 172 FDRVAPTLDVIALVSPAMAAEVVSRD----NVFHVGHGVDHNLDQLGDPSPYAEGIHAVAVGSMLFDPEF 237 (406)
T ss_dssp HHHHGGGCSEEEESCGGGGGGCSCST----TEEECCCCBCTTHHHHHCSCSCCSSEEEEEECCTTBCHHH
T ss_pred HHHHHHhCCEEEEcCHHHHHHHHhcC----CEEEEcCCcChHhcCcccccccCCCcEEEEEeccccccCH
Confidence 45567899999999999998876542 7999999999987752111111113789999999999999
No 20
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=98.43 E-value=8.9e-07 Score=81.90 Aligned_cols=78 Identities=6% Similarity=-0.088 Sum_probs=55.1
Q ss_pred ccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCC-CCCccccc--------------CCC-CCCCC-CEEEEEcCccc
Q 022054 219 GSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPC-DTSGLQVL--------------PLE-RSTEY-PAIISVAQFRP 280 (303)
Q Consensus 219 ~~~ad~viaNS~~t~~~i~~~~~~-~~~~~VIYPPv-d~~~~~~~--------------~~~-~~~~~-~~iLsvgRl~p 280 (303)
.+.+|.+++.|+.+++.+.+ +|. ++++.|+++|+ |...+... .+. -...+ ..++++||+++
T Consensus 139 ~~~~d~ii~~s~~~~~~l~~-~g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~ 217 (384)
T 1vgv_A 139 GHLAMYHFSPTETSRQNLLR-ENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRES 217 (384)
T ss_dssp HTTCSEEEESSHHHHHHHHH-TTCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEEECCCBSS
T ss_pred HhhccEEEcCcHHHHHHHHH-cCCChhhEEEeCChHHHHHHhhhhccccchhhhHHHHHhccccCCCCCEEEEEeCCccc
Confidence 36699999999999999987 576 56789999995 32111100 000 10112 35679999998
Q ss_pred c-cChHHHHHHHHHcccC
Q 022054 281 E-KVRYKLISTRHILFNL 297 (303)
Q Consensus 281 ~-Kn~~llI~Afa~L~~~ 297 (303)
+ |+++.+++|++.+.++
T Consensus 218 ~~kg~~~li~a~~~l~~~ 235 (384)
T 1vgv_A 218 FGRGFEEICHALADIATT 235 (384)
T ss_dssp CCHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHhh
Confidence 7 9999999999998654
No 21
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=98.21 E-value=5.1e-06 Score=76.73 Aligned_cols=77 Identities=10% Similarity=-0.014 Sum_probs=54.0
Q ss_pred cCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCC-CCcccc--cCCCC--CCCCCEEEEEcCcccccChHHHHHHHHH
Q 022054 220 SCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCD-TSGLQV--LPLER--STEYPAIISVAQFRPEKVRYKLISTRHI 293 (303)
Q Consensus 220 ~~ad~viaNS~~t~~~i~~~~~~-~~~~~VIYPPvd-~~~~~~--~~~~~--~~~~~~iLsvgRl~p~Kn~~llI~Afa~ 293 (303)
+.+|.+++.|+.+++.+.+. |+ ++++.|+++|+. ...+.. ..... ..+...++++||++++|+++.+++|++.
T Consensus 145 ~~~~~~~~~s~~~~~~l~~~-g~~~~ki~vi~n~~~d~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~k~~~~ll~a~~~ 223 (376)
T 1v4v_A 145 VLTDLDFAPTPLAKANLLKE-GKREEGILVTGQTGVDAVLLAAKLGRLPEGLPEGPYVTVTMHRRENWPLLSDLAQALKR 223 (376)
T ss_dssp HHCSEEEESSHHHHHHHHTT-TCCGGGEEECCCHHHHHHHHHHHHCCCCTTCCSSCEEEECCCCGGGGGGHHHHHHHHHH
T ss_pred HHhceeeCCCHHHHHHHHHc-CCCcceEEEECCchHHHHhhhhhhhHHHHhcCCCCEEEEEeCcccchHHHHHHHHHHHH
Confidence 45899999999999999875 76 567889998863 211100 00000 1112355689999999999999999999
Q ss_pred cccC
Q 022054 294 LFNL 297 (303)
Q Consensus 294 L~~~ 297 (303)
+.++
T Consensus 224 l~~~ 227 (376)
T 1v4v_A 224 VAEA 227 (376)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 8653
No 22
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=98.13 E-value=9.8e-06 Score=81.46 Aligned_cols=80 Identities=13% Similarity=0.007 Sum_probs=59.3
Q ss_pred HHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCccccc------------CC------------CCC-CCC
Q 022054 215 YGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVL------------PL------------ERS-TEY 269 (303)
Q Consensus 215 ~~~~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~~~------------~~------------~~~-~~~ 269 (303)
.+..+..||.|+++|..++++++.+++.+.+ .+|+|.+|++.+... .. .-. ...
T Consensus 254 EKaga~~AD~ITTVS~~yA~Ei~~Ll~r~~d-~iIpNGID~~~f~p~~~~~~~k~~aK~klq~~l~~~~~~~l~l~~dk~ 332 (725)
T 3nb0_A 254 ERAAAHSADVFTTVSQITAFEAEHLLKRKPD-GILPNGLNVIKFQAFHEFQNLHALKKEKINDFVRGHFHGCFDFDLDNT 332 (725)
T ss_dssp HHHHHHHSSEEEESSHHHHHHHHHHTSSCCS-EECCCCBCCCCCSSTTHHHHHHHHHHHHHHHHHHHHTTTCCCSCGGGE
T ss_pred HHHHHHhCCEEEECCHHHHHHHHHHhcCCCC-EEEcCCccccccCcchhhHHHHHHHHHHHHHHHHhhcccCCCCCCCce
Confidence 4455678999999999999999999885222 459999999887421 00 000 112
Q ss_pred CEEEEEcCcc-cccChHHHHHHHHHcc
Q 022054 270 PAIISVAQFR-PEKVRYKLISTRHILF 295 (303)
Q Consensus 270 ~~iLsvgRl~-p~Kn~~llI~Afa~L~ 295 (303)
.++..+||++ ++|++|++|+|+++|.
T Consensus 333 liifivgRle~~nKGiDl~ieAl~~L~ 359 (725)
T 3nb0_A 333 LYFFIAGRYEYKNKGADMFIEALARLN 359 (725)
T ss_dssp EEEEEESSCCTTTTTHHHHHHHHHHHH
T ss_pred eEEEEEEEeccccCCHHHHHHHHHHHH
Confidence 3444589999 8899999999999986
No 23
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.06 E-value=0.00012 Score=68.48 Aligned_cols=76 Identities=7% Similarity=-0.070 Sum_probs=52.9
Q ss_pred HHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCCCCCCCCCEEEEEcCcccccChHHHHHHHHHcc
Q 022054 216 GLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKVRYKLISTRHILF 295 (303)
Q Consensus 216 ~~~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~~~~~~~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~ 295 (303)
++..+.+|.+++.|+.+++.+.+. |.+ ++.|++++.-..... + ....+++++++.|+ .+|+++.+|+||++++
T Consensus 148 ~~~~~~~d~ii~~S~~~~~~l~~~-g~~-ki~vi~n~~f~~~~~--~-~~~l~~~vi~~~~~--~~k~~~~ll~A~~~l~ 220 (374)
T 2xci_A 148 KILSKKFDLIIMRTQEDVEKFKTF-GAK-RVFSCGNLKFICQKG--K-GIKLKGEFIVAGSI--HTGEVEIILKAFKEIK 220 (374)
T ss_dssp HHHHTTCSEEEESCHHHHHHHHTT-TCC-SEEECCCGGGCCCCC--S-CCCCSSCEEEEEEE--CGGGHHHHHHHHHHHH
T ss_pred HHHHHhCCEEEECCHHHHHHHHHc-CCC-eEEEcCCCccCCCcC--h-hhhhcCCEEEEEeC--CCchHHHHHHHHHHHH
Confidence 444578999999999999999885 654 788998873111000 1 11111356777775 5799999999999987
Q ss_pred cCC
Q 022054 296 NLR 298 (303)
Q Consensus 296 ~~~ 298 (303)
++.
T Consensus 221 ~~~ 223 (374)
T 2xci_A 221 KTY 223 (374)
T ss_dssp TTC
T ss_pred hhC
Confidence 653
No 24
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=97.61 E-value=0.0015 Score=60.64 Aligned_cols=132 Identities=11% Similarity=0.028 Sum_probs=76.6
Q ss_pred hhhHHHHHHHHHHHHHhccCCcEEEeCCCcccccc-e-eeccCCeEEEEeecCCcchHHHhhhhccccccCchhhhhhch
Q 022054 121 MIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-L-ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSN 198 (303)
Q Consensus 121 l~~~~l~~~~~~~~~l~~~~pDv~i~t~~~~~~~p-l-a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~~~~~~~ 198 (303)
..++.+.++..+.+.+++.+||+++++.++....+ + +++.+.|++.+..+-.
T Consensus 73 ~~~~~~~~~~~~~~~l~~~~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n~~-------------------------- 126 (365)
T 3s2u_A 73 APLELLKSLFQALRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQNAV-------------------------- 126 (365)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCSEEEECSSSTHHHHHHHHHHTTCCEEEEECSSS--------------------------
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEcCCcchHHHHHHHHHcCCCEEEEecchh--------------------------
Confidence 34555555555667788999999998877643322 2 3467888875432211
Q ss_pred hhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCccccc--CCCCCCCCCE-EEEE
Q 022054 199 WLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVL--PLERSTEYPA-IISV 275 (303)
Q Consensus 199 ~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~~~~--~~~~~~~~~~-iLsv 275 (303)
.+.. -++..+.+|.++.....+ +...++..++.+|+..+.+... ......+.+. +++-
T Consensus 127 -~G~~-----------nr~l~~~a~~v~~~~~~~-------~~~~~k~~~~g~pvr~~~~~~~~~~~~~~~~~~~ilv~g 187 (365)
T 3s2u_A 127 -AGTA-----------NRSLAPIARRVCEAFPDT-------FPASDKRLTTGNPVRGELFLDAHARAPLTGRRVNLLVLG 187 (365)
T ss_dssp -CCHH-----------HHHHGGGCSEEEESSTTS-------SCC---CEECCCCCCGGGCCCTTSSCCCTTSCCEEEECC
T ss_pred -hhhH-----------HHhhccccceeeeccccc-------ccCcCcEEEECCCCchhhccchhhhcccCCCCcEEEEEC
Confidence 0111 112335688887765432 2213567778899876655421 1111111344 4455
Q ss_pred cCcccccChHHHHHHHHHcccC
Q 022054 276 AQFRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 276 gRl~p~Kn~~llI~Afa~L~~~ 297 (303)
|.+-.++..+.+++|++.+..+
T Consensus 188 Gs~g~~~~~~~~~~al~~l~~~ 209 (365)
T 3s2u_A 188 GSLGAEPLNKLLPEALAQVPLE 209 (365)
T ss_dssp TTTTCSHHHHHHHHHHHTSCTT
T ss_pred CcCCccccchhhHHHHHhcccc
Confidence 7888888889999999988654
No 25
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=97.59 E-value=0.0016 Score=60.39 Aligned_cols=44 Identities=18% Similarity=0.131 Sum_probs=30.5
Q ss_pred hccCCCCcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEecc
Q 022054 28 NARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (303)
Q Consensus 28 ~~~~~~~~rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~ 76 (303)
......+|||.|+- +.++|...-+..++++|.+.+ +++.++++.
T Consensus 14 ~~~~~~~MrIl~~~---~~~~Gh~~~~~~la~~L~~~G--heV~v~~~~ 57 (412)
T 3otg_A 14 GHIEGRHMRVLFAS---LGTHGHTYPLLPLATAARAAG--HEVTFATGE 57 (412)
T ss_dssp ----CCSCEEEEEC---CSSHHHHGGGHHHHHHHHHTT--CEEEEEECG
T ss_pred CCcccceeEEEEEc---CCCcccHHHHHHHHHHHHHCC--CEEEEEccH
Confidence 34556789999987 245777777889999999986 556677653
No 26
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=97.44 E-value=0.00017 Score=70.11 Aligned_cols=54 Identities=15% Similarity=0.040 Sum_probs=40.6
Q ss_pred CCceEEcCCCCCCccccc---CCC--------CCCCCCEEEEEcCcccccChHHHHHHHHHcccC
Q 022054 244 DRIKRVYPPCDTSGLQVL---PLE--------RSTEYPAIISVAQFRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 244 ~~~~VIYPPvd~~~~~~~---~~~--------~~~~~~~iLsvgRl~p~Kn~~llI~Afa~L~~~ 297 (303)
.++.|+++.||++.|... +.. .-+..+++++|||+.++||++.+|+||+++.++
T Consensus 219 ~~v~vip~GID~~~f~~~~~~~~~~~~~~lr~~~~~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~ 283 (482)
T 1uqt_A 219 FRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEK 283 (482)
T ss_dssp EEEEECCCCCCHHHHHHHHHSCCCHHHHHHHHHTTTCEEEEEECCBCGGGCHHHHHHHHHHHHHH
T ss_pred EEEEEEeccCCHHHHHHHhcCcchHHHHHHHHHhCCCEEEEEEeCCcccCCHHHHHHHHHHHHHh
Confidence 468899999998877421 000 001257999999999999999999999998654
No 27
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=97.10 E-value=0.0028 Score=59.57 Aligned_cols=215 Identities=11% Similarity=0.008 Sum_probs=109.7
Q ss_pred CCCcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEE-EEeccCCCChhHHHHhhhhccCccccCCCeEEEccccce
Q 022054 32 NRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCI-VYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKW 110 (303)
Q Consensus 32 ~~~~rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~-v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~ 110 (303)
.+++||+++- |..-|.-+. ..++++|++. ++.++. +.|+.+ . ++.+..-+.|+++.+ ..|..-
T Consensus 23 ~~m~ki~~v~---Gtr~~~~~~-a~li~~l~~~-~~~~~~~~~tG~h-~---~~~~~~~~~~~i~~~-----~~l~~~-- 86 (396)
T 3dzc_A 23 NAMKKVLIVF---GTRPEAIKM-APLVQQLCQD-NRFVAKVCVTGQH-R---EMLDQVLELFSITPD-----FDLNIM-- 86 (396)
T ss_dssp -CCEEEEEEE---CSHHHHHHH-HHHHHHHHHC-TTEEEEEEECCSS-S---HHHHHHHHHTTCCCS-----EECCCC--
T ss_pred CCCCeEEEEE---eccHhHHHH-HHHHHHHHhC-CCCcEEEEEeccc-H---HHHHHHHHhcCCCCc-----eeeecC--
Confidence 4457898876 223344444 4678888875 566663 566654 1 122222233554211 111100
Q ss_pred eecccCCchhhhhHHHHHHHHHHHHHhccCCcEEEeCCCcccccc--e-eeccCCeEEEEeecCCcchHHHhhhhccccc
Q 022054 111 IEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--L-ARIFGCRVICYTHYPTISLDMISRVREGSSM 187 (303)
Q Consensus 111 ~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~pDv~i~t~~~~~~~p--l-a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~ 187 (303)
. ...++..+....+....+.+++.+||+++...+.....+ + +...+.|++. +|.+..+ |+.
T Consensus 87 ~-----~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h-~~ag~rs-------~~~--- 150 (396)
T 3dzc_A 87 E-----PGQTLNGVTSKILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPVGH-VEAGLRT-------GNI--- 150 (396)
T ss_dssp C-----TTCCHHHHHHHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTTTCCEEE-ETCCCCC-------SCT---
T ss_pred C-----CCCCHHHHHHHHHHHHHHHHHhcCCCEEEEECCchhHHHHHHHHHHhCCCEEE-EECCccc-------ccc---
Confidence 0 001122222223333455678889998775544433344 2 2356788654 3333300 100
Q ss_pred cCchhhhhhchhhhHhHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCc-cccc----
Q 022054 188 YNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSG-LQVL---- 261 (303)
Q Consensus 188 ~~~~~~~~~~~~~~~~k~~y~~~~~~l~~~~~~~ad~viaNS~~t~~~i~~~~~~-~~~~~VIYPPvd~~~-~~~~---- 261 (303)
|+ .+. ....+++ ..+.+|.+++.|+..++.+.+ .|+ ++++.|+.+|+.... +...
T Consensus 151 ~~--------~~~---~~~~r~~-------~~~~a~~~~~~se~~~~~l~~-~G~~~~ki~vvGn~~~d~~~~~~~~~~~ 211 (396)
T 3dzc_A 151 YS--------PWP---EEGNRKL-------TAALTQYHFAPTDTSRANLLQ-ENYNAENIFVTGNTVIDALLAVREKIHT 211 (396)
T ss_dssp TS--------STT---HHHHHHH-------HHHTCSEEEESSHHHHHHHHH-TTCCGGGEEECCCHHHHHHHHHHHHHHH
T ss_pred cc--------CCc---HHHHHHH-------HHHhcCEEECCCHHHHHHHHH-cCCCcCcEEEECCcHHHHHHHhhhhccc
Confidence 00 000 1111111 135689999999999999987 476 567889988863211 1000
Q ss_pred ----------CCCC-CCCCCEEE-EEcCcc-cccChHHHHHHHHHcccC
Q 022054 262 ----------PLER-STEYPAII-SVAQFR-PEKVRYKLISTRHILFNL 297 (303)
Q Consensus 262 ----------~~~~-~~~~~~iL-svgRl~-p~Kn~~llI~Afa~L~~~ 297 (303)
.+.. ...++++| +.+|.. ..|+++.+++|++.+.++
T Consensus 212 ~~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~ 260 (396)
T 3dzc_A 212 DMDLQATLESQFPMLDASKKLILVTGHRRESFGGGFERICQALITTAEQ 260 (396)
T ss_dssp CHHHHHHHHHTCTTCCTTSEEEEEECSCBCCCTTHHHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHhCccCCCCCEEEEEECCcccchhHHHHHHHHHHHHHHh
Confidence 0110 01135554 566754 458899999999998653
No 28
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=96.42 E-value=0.015 Score=56.48 Aligned_cols=77 Identities=9% Similarity=-0.036 Sum_probs=52.3
Q ss_pred cCCcEEEEcCHHHHHHHHH----Hh-CC--------------CCCceEEcCCCCCCcccccCCC--CC-----CCCCEEE
Q 022054 220 SCADLAMVNSSWTQSHIEK----LW-GI--------------PDRIKRVYPPCDTSGLQVLPLE--RS-----TEYPAII 273 (303)
Q Consensus 220 ~~ad~viaNS~~t~~~i~~----~~-~~--------------~~~~~VIYPPvd~~~~~~~~~~--~~-----~~~~~iL 273 (303)
-.+|.|.-.+..-++++.+ .. |. ..++.|+++.||++.|.....+ .. +..++||
T Consensus 206 l~~DligF~t~~y~~~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~~~~~lr~~~~~~~lIl 285 (496)
T 3t5t_A 206 LPATTIGFFADRWCRNFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQLPEGIEEWADGHRLVV 285 (496)
T ss_dssp TTSSEEEESSHHHHHHHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CCCCTTHHHHHTTSEEEE
T ss_pred HhCCEEEEecHHHHHHHHHHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHHHHHHHHHHhCCceEEE
Confidence 4688888888766665433 33 32 1256788899999988632111 00 1357999
Q ss_pred EEcCcccccChHHHHHHHHHcccC
Q 022054 274 SVAQFRPEKVRYKLISTRHILFNL 297 (303)
Q Consensus 274 svgRl~p~Kn~~llI~Afa~L~~~ 297 (303)
+|||+.+.||++.+|+|| ++.++
T Consensus 286 ~VgRLd~~KGi~~lL~Af-~ll~~ 308 (496)
T 3t5t_A 286 HSGRTDPIKNAERAVRAF-VLAAR 308 (496)
T ss_dssp EEEESSGGGCHHHHHHHH-HHHHH
T ss_pred EcccCccccCHHHHHHHH-HHHHh
Confidence 999999999999999999 66544
No 29
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=96.27 E-value=0.076 Score=49.39 Aligned_cols=38 Identities=8% Similarity=0.074 Sum_probs=27.6
Q ss_pred CcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEecc
Q 022054 34 TTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (303)
Q Consensus 34 ~~rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~ 76 (303)
.++|.|+ + . .++|....+..++++|.+.+ +++.++++.
T Consensus 7 m~kIl~~-~-~-~~~Gh~~p~~~la~~L~~~G--~~V~~~~~~ 44 (430)
T 2iyf_A 7 PAHIAMF-S-I-AAHGHVNPSLEVIRELVARG--HRVTYAIPP 44 (430)
T ss_dssp -CEEEEE-C-C-SCHHHHGGGHHHHHHHHHTT--CEEEEEECG
T ss_pred cceEEEE-e-C-CCCccccchHHHHHHHHHCC--CeEEEEeCH
Confidence 3689887 3 2 45777888899999999975 566677654
No 30
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=95.46 E-value=0.051 Score=50.11 Aligned_cols=42 Identities=12% Similarity=0.021 Sum_probs=27.8
Q ss_pred ccCCCCcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEec
Q 022054 29 ARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTG 75 (303)
Q Consensus 29 ~~~~~~~rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~ 75 (303)
-....+|||+|+.. .++|-..-+..++++|.+.++ +|.++++
T Consensus 10 ~~~~~~MrIl~~~~---~~~gh~~~~~~La~~L~~~Gh--eV~v~~~ 51 (398)
T 4fzr_A 10 VPRGSHMRILVIAG---CSEGFVMPLVPLSWALRAAGH--EVLVAAS 51 (398)
T ss_dssp -----CCEEEEECC---SSHHHHGGGHHHHHHHHHTTC--EEEEEEE
T ss_pred CCCCCceEEEEEcC---CCcchHHHHHHHHHHHHHCCC--EEEEEcC
Confidence 34566799999863 246666677899999999864 5566664
No 31
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=94.73 E-value=0.34 Score=44.13 Aligned_cols=36 Identities=8% Similarity=0.036 Sum_probs=26.9
Q ss_pred cEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEec
Q 022054 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTG 75 (303)
Q Consensus 35 ~rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~ 75 (303)
|||.|+- . .++|-..-+..++++|++.+ +++.++++
T Consensus 1 MrIl~~~-~--~~~Gh~~p~~~la~~L~~~G--h~V~~~~~ 36 (384)
T 2p6p_A 1 MRILFVA-A--GSPATVFALAPLATAARNAG--HQVVMAAN 36 (384)
T ss_dssp CEEEEEC-C--SSHHHHHHHHHHHHHHHHTT--CEEEEEEC
T ss_pred CEEEEEe-C--CccchHhHHHHHHHHHHHCC--CEEEEEeC
Confidence 5788872 2 45788888899999999875 56666664
No 32
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=93.78 E-value=0.06 Score=50.56 Aligned_cols=76 Identities=9% Similarity=0.032 Sum_probs=50.4
Q ss_pred cCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCC-CCCcccccCC--CC-----CCCCCE-EEEEcCccc-ccChHHHH
Q 022054 220 SCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPC-DTSGLQVLPL--ER-----STEYPA-IISVAQFRP-EKVRYKLI 288 (303)
Q Consensus 220 ~~ad~viaNS~~t~~~i~~~~~~-~~~~~VIYPPv-d~~~~~~~~~--~~-----~~~~~~-iLsvgRl~p-~Kn~~llI 288 (303)
+.+|.+++.|+..++.+.+. |+ ++++.|+.+|+ |...+..... .+ .. +++ +++.||.+. .|+++.++
T Consensus 168 ~~a~~~~~~se~~~~~l~~~-Gi~~~~i~vvGn~~~D~~~~~~~~~~~~~~~~~l~~-~~~vlv~~~r~~~~~~~l~~ll 245 (403)
T 3ot5_A 168 VMADIHFSPTKQAKENLLAE-GKDPATIFVTGNTAIDALKTTVQKDYHHPILENLGD-NRLILMTAHRRENLGEPMQGMF 245 (403)
T ss_dssp HHCSEEEESSHHHHHHHHHT-TCCGGGEEECCCHHHHHHHHHSCTTCCCHHHHSCTT-CEEEEECCCCHHHHTTHHHHHH
T ss_pred HhcCEEECCCHHHHHHHHHc-CCCcccEEEeCCchHHHHHhhhhhhcchHHHHhccC-CCEEEEEeCcccccCcHHHHHH
Confidence 34899999999999999885 76 56788888876 2111110000 00 11 344 457888765 37789999
Q ss_pred HHHHHcccC
Q 022054 289 STRHILFNL 297 (303)
Q Consensus 289 ~Afa~L~~~ 297 (303)
+|++.+.++
T Consensus 246 ~a~~~l~~~ 254 (403)
T 3ot5_A 246 EAVREIVES 254 (403)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999988653
No 33
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=93.63 E-value=0.18 Score=46.03 Aligned_cols=37 Identities=8% Similarity=-0.088 Sum_probs=27.4
Q ss_pred CcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEec
Q 022054 34 TTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTG 75 (303)
Q Consensus 34 ~~rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~ 75 (303)
+|||+|+-. .++|-..-+..++++|.+.++ ++.+++.
T Consensus 1 ~MrIl~~~~---~~~gh~~~~~~la~~L~~~Gh--eV~v~~~ 37 (391)
T 3tsa_A 1 HMRVLVVPL---PYPTHLMAMVPLCWALQASGH--EVLIAAP 37 (391)
T ss_dssp CCEEEEECC---SCHHHHHTTHHHHHHHHHTTC--EEEEEEC
T ss_pred CcEEEEEcC---CCcchhhhHHHHHHHHHHCCC--EEEEecC
Confidence 478998864 357777778899999999865 4556653
No 34
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=93.25 E-value=0.59 Score=43.51 Aligned_cols=75 Identities=9% Similarity=0.028 Sum_probs=48.7
Q ss_pred cCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCc-cc-----cc----CCCCCCCCCE-EEEEcCcc---cccCh
Q 022054 220 SCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSG-LQ-----VL----PLERSTEYPA-IISVAQFR---PEKVR 284 (303)
Q Consensus 220 ~~ad~viaNS~~t~~~i~~~~~~-~~~~~VIYPPvd~~~-~~-----~~----~~~~~~~~~~-iLsvgRl~---p~Kn~ 284 (303)
+.+|.+++.|+..++.+.+. |+ ++++.|+-+|+-... .. .. .+.-.. +++ +++.+|-+ ++|++
T Consensus 145 ~~a~~~~~~te~~~~~l~~~-G~~~~~I~vtGnp~~D~~~~~~~~~~~~~~~~~lgl~~-~~~iLvt~hr~e~~~~~~~l 222 (385)
T 4hwg_A 145 HISDVNITLTEHARRYLIAE-GLPAELTFKSGSHMPEVLDRFMPKILKSDILDKLSLTP-KQYFLISSHREENVDVKNNL 222 (385)
T ss_dssp HHCSEEEESSHHHHHHHHHT-TCCGGGEEECCCSHHHHHHHHHHHHHHCCHHHHTTCCT-TSEEEEEECCC-----CHHH
T ss_pred hhhceeecCCHHHHHHHHHc-CCCcCcEEEECCchHHHHHHhhhhcchhHHHHHcCCCc-CCEEEEEeCCchhcCcHHHH
Confidence 34899999999999999875 66 567888888863211 10 00 011111 344 45677754 55889
Q ss_pred HHHHHHHHHccc
Q 022054 285 YKLISTRHILFN 296 (303)
Q Consensus 285 ~llI~Afa~L~~ 296 (303)
+.+++|++.+.+
T Consensus 223 ~~ll~al~~l~~ 234 (385)
T 4hwg_A 223 KELLNSLQMLIK 234 (385)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999998864
No 35
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=93.24 E-value=1.6 Score=40.03 Aligned_cols=40 Identities=8% Similarity=-0.036 Sum_probs=27.0
Q ss_pred CCCCcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEec
Q 022054 31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTG 75 (303)
Q Consensus 31 ~~~~~rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~ 75 (303)
+.+++||.|+-. .++|--.-++.++++|.+.+ ++|.++++
T Consensus 17 ~~~m~rIl~~~~---~~~GHv~p~l~La~~L~~~G--h~V~v~~~ 56 (415)
T 3rsc_A 17 GRHMAHLLIVNV---ASHGLILPTLTVVTELVRRG--HRVSYVTA 56 (415)
T ss_dssp --CCCEEEEECC---SCHHHHGGGHHHHHHHHHTT--CEEEEEEC
T ss_pred cccCCEEEEEeC---CCccccccHHHHHHHHHHCC--CEEEEEeC
Confidence 345689998763 24565566678999999985 45667664
No 36
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=93.18 E-value=2.2 Score=38.56 Aligned_cols=36 Identities=14% Similarity=0.076 Sum_probs=24.9
Q ss_pred cEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEec
Q 022054 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTG 75 (303)
Q Consensus 35 ~rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~ 75 (303)
+||.|+-. .+.|--.-+..++++|.+.+ ++|.++++
T Consensus 5 ~~il~~~~---~~~Ghv~~~~~La~~L~~~G--heV~v~~~ 40 (402)
T 3ia7_A 5 RHILFANV---QGHGHVYPSLGLVSELARRG--HRITYVTT 40 (402)
T ss_dssp CEEEEECC---SSHHHHHHHHHHHHHHHHTT--CEEEEEEC
T ss_pred CEEEEEeC---CCCcccccHHHHHHHHHhCC--CEEEEEcC
Confidence 48888763 23555566679999999986 45667664
No 37
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=89.59 E-value=0.18 Score=41.34 Aligned_cols=27 Identities=19% Similarity=0.144 Sum_probs=25.2
Q ss_pred CCEEEEEcCcc-cccChHHHHHHHHHcc
Q 022054 269 YPAIISVAQFR-PEKVRYKLISTRHILF 295 (303)
Q Consensus 269 ~~~iLsvgRl~-p~Kn~~llI~Afa~L~ 295 (303)
++.++++||+. ++|+++.+++|++.+.
T Consensus 36 ~~~i~~~G~~~~~~K~~~~li~a~~~l~ 63 (200)
T 2bfw_A 36 GVTFMFIGRFDRGQKGVDVLLKAIEILS 63 (200)
T ss_dssp CEEEEEESCBCSSSSCHHHHHHHHHHHT
T ss_pred CCEEEEeeccccccCCHHHHHHHHHHHH
Confidence 46999999999 9999999999999985
No 38
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=84.83 E-value=3.4 Score=37.66 Aligned_cols=41 Identities=17% Similarity=0.131 Sum_probs=29.2
Q ss_pred cCCCCcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEec
Q 022054 30 RRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTG 75 (303)
Q Consensus 30 ~~~~~~rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~ 75 (303)
...+.|||+|+-. .++|-..-+..++++|.+.+ ++|.++++
T Consensus 16 ~~~~~MrIl~~~~---~~~Ghv~~~~~La~~L~~~G--heV~v~~~ 56 (398)
T 3oti_A 16 IEGRHMRVLFVSS---PGIGHLFPLIQLAWGFRTAG--HDVLIAVA 56 (398)
T ss_dssp ---CCCEEEEECC---SSHHHHGGGHHHHHHHHHTT--CEEEEEES
T ss_pred hhhhcCEEEEEcC---CCcchHhHHHHHHHHHHHCC--CEEEEecc
Confidence 3556799999974 25666777789999999986 56677775
No 39
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=82.88 E-value=1.9 Score=39.34 Aligned_cols=62 Identities=15% Similarity=0.010 Sum_probs=38.9
Q ss_pred HHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCC-CCCcccccCCCCCCCCCEEEEEcCccc
Q 022054 215 YGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPC-DTSGLQVLPLERSTEYPAIISVAQFRP 280 (303)
Q Consensus 215 ~~~~~~~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPv-d~~~~~~~~~~~~~~~~~iLsvgRl~p 280 (303)
+++.+++||.|++.|+.+++.+.+. |++ ...+++.+. +.. ...+......++.++++||+..
T Consensus 127 E~~~y~~aD~Ii~~S~~~~~~l~~~-G~~-~~ki~~~~~~~~~--~~~~~~~~~~~~~i~yaG~l~k 189 (339)
T 3rhz_A 127 TIAYYNKADVVVAPSQKMIDKLRDF-GMN-VSKTVVQGMWDHP--TQAPMFPAGLKREIHFPGNPER 189 (339)
T ss_dssp HHHHHTTCSEEEESCHHHHHHHHHT-TCC-CSEEEECCSCCCC--CCCCCCCCEEEEEEEECSCTTT
T ss_pred HHHHHHHCCEEEECCHHHHHHHHHc-CCC-cCceeecCCCCcc--CcccccccCCCcEEEEeCCcch
Confidence 5566799999999999999999884 652 123444443 211 1111111112468999999994
No 40
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=67.11 E-value=68 Score=28.44 Aligned_cols=41 Identities=12% Similarity=0.022 Sum_probs=26.1
Q ss_pred CCCCcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEecc
Q 022054 31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (303)
Q Consensus 31 ~~~~~rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~ 76 (303)
+.+.|||.|+ + . .+.|==.-++.++++|.++|+ +|.++|+.
T Consensus 19 ~~~~MRIL~~-~-~-p~~GHv~P~l~LA~~L~~rGh--~Vt~~t~~ 59 (400)
T 4amg_A 19 YFQSMRALFI-T-S-PGLSHILPTVPLAQALRALGH--EVRYATGG 59 (400)
T ss_dssp --CCCEEEEE-C-C-SSHHHHGGGHHHHHHHHHTTC--EEEEEECS
T ss_pred CCCCCeEEEE-C-C-CchhHHHHHHHHHHHHHHCCC--EEEEEeCc
Confidence 4567999987 2 2 234444446789999999864 55666653
No 41
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=64.57 E-value=73 Score=27.85 Aligned_cols=36 Identities=14% Similarity=0.180 Sum_probs=26.5
Q ss_pred cCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcc
Q 022054 220 SCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGL 258 (303)
Q Consensus 220 ~~ad~viaNS~~t~~~i~~~~~~~~~~~VIYPPvd~~~~ 258 (303)
+.+|.+|+|++++. ++....| ....++|.|-+....
T Consensus 260 ~~a~l~I~~Dsg~~-HlAaa~g--~P~v~lfg~t~~~~~ 295 (348)
T 1psw_A 260 AACKAIVTNDSGLM-HVAAALN--RPLVALYGPSSPDFT 295 (348)
T ss_dssp HTSSEEEEESSHHH-HHHHHTT--CCEEEEESSSCTTSS
T ss_pred HhCCEEEecCCHHH-HHHHHcC--CCEEEEECCCCcccc
Confidence 46889999988874 4577777 667788888776554
No 42
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=64.17 E-value=54 Score=29.66 Aligned_cols=40 Identities=15% Similarity=0.129 Sum_probs=28.1
Q ss_pred CCCcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEecc
Q 022054 32 NRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (303)
Q Consensus 32 ~~~~rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~ 76 (303)
-.+++|.|+ +. .+.|=-.-++.++++|++++ ++|.++++.
T Consensus 10 m~~~~Il~~-~~--~~~GHv~p~l~la~~L~~~G--h~V~~~~~~ 49 (424)
T 2iya_A 10 VTPRHISFF-NI--PGHGHVNPSLGIVQELVARG--HRVSYAITD 49 (424)
T ss_dssp -CCCEEEEE-CC--SCHHHHHHHHHHHHHHHHTT--CEEEEEECG
T ss_pred cccceEEEE-eC--CCCcccchHHHHHHHHHHCC--CeEEEEeCH
Confidence 345789987 33 34677777889999999975 566677654
No 43
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=62.59 E-value=60 Score=28.28 Aligned_cols=39 Identities=13% Similarity=0.071 Sum_probs=28.8
Q ss_pred cEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEecc
Q 022054 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (303)
Q Consensus 35 ~rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~ 76 (303)
|||.++.++. =|=.-...-++++|.+.+|++++.+.+..
T Consensus 1 ~~ILii~~~~---iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~ 39 (326)
T 2gt1_A 1 MRVLIVKTSS---MGDVLHTLPALTDAQQAIPGIKFDWVVEE 39 (326)
T ss_dssp CEEEEECCCC---HHHHHHHHHHHHHHHHHSTTCEEEEEEEG
T ss_pred CeEEEEeccc---cchHHhHHHHHHHHHHhCCCCEEEEEEeh
Confidence 4777776432 34444677889999999999998888864
No 44
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=49.05 E-value=47 Score=30.37 Aligned_cols=38 Identities=13% Similarity=-0.036 Sum_probs=26.4
Q ss_pred CCcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEec
Q 022054 33 RTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTG 75 (303)
Q Consensus 33 ~~~rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~ 75 (303)
..|||.|+ + . +.+|=-.-++.++++|++.+ ++|.++++
T Consensus 19 ~~mrIl~~-~-~-~~~GHv~p~l~la~~L~~~G--heV~~~~~ 56 (441)
T 2yjn_A 19 SHMRVVFS-S-M-ASKSHLFGLVPLAWAFRAAG--HEVRVVAS 56 (441)
T ss_dssp CCCEEEEE-C-C-SCHHHHTTTHHHHHHHHHTT--CEEEEEEC
T ss_pred CccEEEEE-c-C-CCcchHhHHHHHHHHHHHCC--CeEEEEeC
Confidence 35799988 2 2 34565566779999999975 56666664
No 45
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=44.93 E-value=1.3e+02 Score=26.86 Aligned_cols=43 Identities=5% Similarity=-0.035 Sum_probs=29.6
Q ss_pred CCCCcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEecc
Q 022054 31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (303)
Q Consensus 31 ~~~~~rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~ 76 (303)
.-..++|.++...- =|=--...-++++|.+.+|++++.+.+..
T Consensus 5 ~l~~~~iLvi~~~~---lGD~i~~~P~l~~L~~~~P~a~I~~l~~~ 47 (349)
T 3tov_A 5 ELDYKRIVVTFLMH---LGDVILTTPFLEVLRKAAPHSHITYVIDE 47 (349)
T ss_dssp CCTTCEEEEECCCC---HHHHHTTHHHHHHHHHHCTTSEEEEEEEG
T ss_pred CCCCCEEEEEecCc---ccHHHHHHHHHHHHHHHCCCCEEEEEECc
Confidence 34567899998532 22223334478899999999998887753
No 46
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=43.95 E-value=53 Score=32.89 Aligned_cols=113 Identities=9% Similarity=0.124 Sum_probs=56.4
Q ss_pred CCCCcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCChhHHHHhhhhccCccccCCCeEEEccccce
Q 022054 31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKW 110 (303)
Q Consensus 31 ~~~~~rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~L~~~~~ 110 (303)
+.++.|||++-+++.. .=.-..+..+.+.+.+. ..++.+|....+ +.++...++...+. +|+.+.. +
T Consensus 234 ~~~klrIGyvS~df~~-H~v~~~~~~~~~~~d~~--~fei~~y~~~~~-~~~~~~~~~~~~~~-------~~~~~~~--~ 300 (723)
T 4gyw_A 234 SDGRLRVGYVSSDFGN-HPTSHLMQSIPGMHNPD--KFEVFCYALSPD-DGTNFRVKVMAEAN-------HFIDLSQ--I 300 (723)
T ss_dssp TTTCEEEEEEESCSSS-SHHHHHHTTHHHHSCTT--TEEEEEEESSCC-CSCHHHHHHHHHSS-------EEEEGGG--C
T ss_pred ccccceeeeechhhcc-CcHHHHHHHHHHHhccC--ceeEEEEEcCCC-CccHHHHHHHHhhc-------ccccccc--C
Confidence 4567899999999953 43334444444433332 355666654321 22233333332221 1332211 0
Q ss_pred eecccCCchhhhhHHHHHHHHHHHHHhccCCcEEEeCCCccccc--ceeeccCCeE-EEEeecCC
Q 022054 111 IEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTY--PLARIFGCRV-ICYTHYPT 172 (303)
Q Consensus 111 ~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~pDv~i~t~~~~~~~--pla~~~~~~~-i~Y~H~P~ 172 (303)
+ +-.-+.+.++..+.||+||-+|+.... .+.....+|+ +.|+-||.
T Consensus 301 ------~----------~d~~~a~~i~~d~iDIlidl~g~t~~~r~~i~a~r~APvQv~~lG~p~ 349 (723)
T 4gyw_A 301 ------P----------CNGKAADRIHQDGIHILVNMNGYTKGARNELFALRPAPIQAMWLGYPG 349 (723)
T ss_dssp ------C----------CHHHHHHHHHHTTCSEEEESCSSBTTCCTHHHHTCCSSEEEECSSCSS
T ss_pred ------C----------cHHHHHHHHHhccceeEEeccCCCCCCcchhhhcCCCCceeeeccCCC
Confidence 0 001133456788999999998875322 2211223555 66776664
No 47
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=32.71 E-value=64 Score=31.96 Aligned_cols=40 Identities=5% Similarity=-0.194 Sum_probs=26.9
Q ss_pred HHHHhccCCcEEEeCCCccccccee--eccCCeE-EEEeecCC
Q 022054 133 WEALCKFTPLYYFDTSGYAFTYPLA--RIFGCRV-ICYTHYPT 172 (303)
Q Consensus 133 ~~~l~~~~pDv~i~t~~~~~~~pla--~~~~~~~-i~Y~H~P~ 172 (303)
.+.++..+.||++|-.++.+...+. ....+|+ +.|+-||.
T Consensus 342 a~~Ir~d~IDILVdL~g~t~~~~i~~aa~RpAPVQvs~lGyp~ 384 (631)
T 3q3e_A 342 RSVCESNGAAIFYMPSIGMDMTTIFASNTRLAPIQAIALGHPA 384 (631)
T ss_dssp HHHHHHHTCSEEEESCCSSSHHHHHHTTSCCSSEEEEECSSCS
T ss_pred HHHHHhcCCCEEEECCCCCCchhHHHHhCCCchheEeccCCCc
Confidence 4556788999999977765444431 1234677 77887776
No 48
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=32.41 E-value=46 Score=20.86 Aligned_cols=15 Identities=7% Similarity=-0.108 Sum_probs=6.6
Q ss_pred HHHHhhhhccCCCCc
Q 022054 21 ILASHVHNARRNRTT 35 (303)
Q Consensus 21 ~~~~~~~~~~~~~~~ 35 (303)
.++..+.|+|.++++
T Consensus 29 ~~~~~~~RRr~~~~k 43 (44)
T 2ks1_B 29 LGIGLFMRRRHIVRK 43 (44)
T ss_dssp HHHHHHHHTTTCCSC
T ss_pred HHHHHHhhhhHhhcc
Confidence 333344455544443
No 49
>1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13
Probab=31.97 E-value=27 Score=29.56 Aligned_cols=38 Identities=16% Similarity=0.093 Sum_probs=22.8
Q ss_pred CCCcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEE
Q 022054 32 NRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVY 73 (303)
Q Consensus 32 ~~~~rVa~~hp~l~~~GGaErv~~~la~aL~~~~~~~~~~v~ 73 (303)
..+..|.|+|-+. |+++ ....++..|.+.++++.++.+
T Consensus 34 ~~~~~vvllHG~~---~~~~-~~~~~~~~L~~~~~g~~vi~~ 71 (302)
T 1pja_A 34 ASYKPVIVVHGLF---DSSY-SFRHLLEYINETHPGTVVTVL 71 (302)
T ss_dssp -CCCCEEEECCTT---CCGG-GGHHHHHHHHHHSTTCCEEEC
T ss_pred CCCCeEEEECCCC---CChh-HHHHHHHHHHhcCCCcEEEEe
Confidence 3455688888433 3333 355678888888556655544
No 50
>2l9s_A PHD finger protein 12; protein-peptide complex, amphipathic helix motif, transcript; NMR {Homo sapiens} PDB: 2lkm_A
Probab=29.88 E-value=40 Score=21.24 Aligned_cols=26 Identities=27% Similarity=0.153 Sum_probs=19.2
Q ss_pred CcccccChHHHHHHHHHcccCCCCCCC
Q 022054 277 QFRPEKVRYKLISTRHILFNLRHFQLP 303 (303)
Q Consensus 277 Rl~p~Kn~~llI~Afa~L~~~~~~~~~ 303 (303)
.++..+-++.+|+|...+..+. ++||
T Consensus 7 ~~~l~sPf~~Li~aA~~~NP~q-F~LP 32 (45)
T 2l9s_A 7 QPQLRRPFELLIAAAMERNPTQ-FQLP 32 (45)
T ss_dssp CCCCCCHHHHHHHHHHHSSCCC-SSCC
T ss_pred ccccCCHHHHHHHHHHHhChhh-hcCC
Confidence 3455678999999998875543 7776
No 51
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=29.83 E-value=1.7e+02 Score=26.16 Aligned_cols=26 Identities=12% Similarity=0.088 Sum_probs=22.6
Q ss_pred CCEEEEEcCcc-cccChHHHHHHHHHc
Q 022054 269 YPAIISVAQFR-PEKVRYKLISTRHIL 294 (303)
Q Consensus 269 ~~~iLsvgRl~-p~Kn~~llI~Afa~L 294 (303)
+..+++.|+.. +.+.++.+++|++.+
T Consensus 222 ~~Vlv~~Gs~~~~~~~~~~~~~al~~~ 248 (404)
T 3h4t_A 222 PPVYVGFGSGPAPAEAARVAIEAVRAQ 248 (404)
T ss_dssp CCEEECCTTSCCCTTHHHHHHHHHHHT
T ss_pred CeEEEECCCCCCcHHHHHHHHHHHHhC
Confidence 56788999998 888899999999875
No 52
>3c01_A Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=28.14 E-value=72 Score=20.34 Aligned_cols=11 Identities=18% Similarity=0.018 Sum_probs=9.5
Q ss_pred hccCCcEEEEc
Q 022054 218 VGSCADLAMVN 228 (303)
Q Consensus 218 ~~~~ad~viaN 228 (303)
..+.||+||+|
T Consensus 38 ~Vp~AdvVitN 48 (48)
T 3c01_A 38 DIENSRLIVAN 48 (48)
T ss_pred cCCCCCEeecC
Confidence 46899999998
No 53
>3bzy_A ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3bzl_A 3bzv_A 3bzx_A 3bzo_A 3bzz_A 3c03_B 3c00_A
Probab=24.46 E-value=90 Score=20.43 Aligned_cols=11 Identities=9% Similarity=-0.106 Sum_probs=9.5
Q ss_pred hccCCcEEEEc
Q 022054 218 VGSCADLAMVN 228 (303)
Q Consensus 218 ~~~~ad~viaN 228 (303)
..+.||+||+|
T Consensus 44 ~Vp~AdvVItN 54 (54)
T 3bzy_A 44 NIKKSTVIVKN 54 (54)
T ss_pred cCCCCCEEecC
Confidence 46899999998
No 54
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=24.31 E-value=1.2e+02 Score=18.88 Aligned_cols=12 Identities=0% Similarity=0.041 Sum_probs=5.9
Q ss_pred HHhhhhccCCCC
Q 022054 23 ASHVHNARRNRT 34 (303)
Q Consensus 23 ~~~~~~~~~~~~ 34 (303)
.+.+.|+|-+++
T Consensus 32 ~~~~RRR~~~~k 43 (44)
T 2jwa_A 32 GILIKRRQQKIR 43 (44)
T ss_dssp HHHHHHHCSCCC
T ss_pred Hhheehhhhhcc
Confidence 334455555544
No 55
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=24.24 E-value=1.2e+02 Score=19.01 Aligned_cols=11 Identities=0% Similarity=-0.082 Sum_probs=4.9
Q ss_pred hhhhccCCCCc
Q 022054 25 HVHNARRNRTT 35 (303)
Q Consensus 25 ~~~~~~~~~~~ 35 (303)
.+.|+|.++++
T Consensus 32 ~~~RRRr~~~k 42 (44)
T 2l2t_A 32 VYVRRKSIKKK 42 (44)
T ss_dssp HHHHTTCSSCC
T ss_pred HHhhhhhhhhc
Confidence 34444444443
No 56
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=22.96 E-value=1.2e+02 Score=19.84 Aligned_cols=14 Identities=43% Similarity=0.812 Sum_probs=6.4
Q ss_pred hHHHHHHHHHHHHH
Q 022054 6 ILIWAVITAVLASI 19 (303)
Q Consensus 6 ~~~~~~~~~~~~~~ 19 (303)
+-.|+++.++++-+
T Consensus 10 vp~wiIi~svl~GL 23 (54)
T 2knc_A 10 IPIWWVLVGVLGGL 23 (54)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHH
Confidence 44455544444333
No 57
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=22.92 E-value=47 Score=21.82 Aligned_cols=17 Identities=18% Similarity=0.665 Sum_probs=8.1
Q ss_pred CchhHHHHHHHHHHHHH
Q 022054 3 PYGILIWAVITAVLASI 19 (303)
Q Consensus 3 ~~~~~~~~~~~~~~~~~ 19 (303)
|.++-+|+++.++++-+
T Consensus 4 ~~~vp~WiIi~svl~GL 20 (54)
T 2l8s_A 4 PGRVPLWVILLSAFAGL 20 (54)
T ss_dssp CCCCCTHHHHHHHHHHH
T ss_pred CccCchHHHHHHHHHHH
Confidence 33444555555544433
No 58
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=21.28 E-value=4.3e+02 Score=23.39 Aligned_cols=26 Identities=8% Similarity=-0.040 Sum_probs=21.9
Q ss_pred CCEEEEEcCcc---cccChHHHHHHHHHc
Q 022054 269 YPAIISVAQFR---PEKVRYKLISTRHIL 294 (303)
Q Consensus 269 ~~~iLsvgRl~---p~Kn~~llI~Afa~L 294 (303)
...+++.|+.. ++|..+.+++|++.+
T Consensus 238 ~~v~v~~Gs~~~~~~~~~~~~~~~al~~~ 266 (416)
T 1rrv_A 238 PPVHIGFGSSSGRGIADAAKVAVEAIRAQ 266 (416)
T ss_dssp CCEEECCTTCCSHHHHHHHHHHHHHHHHT
T ss_pred CeEEEecCCCCccChHHHHHHHHHHHHHC
Confidence 46788999984 688899999999876
No 59
>2l6w_A Beta-type platelet-derived growth factor receptor; transmembrane helix, receptor tyrosine kinase, heptad repeat membrane protein; NMR {Homo sapiens}
Probab=25.11 E-value=22 Score=21.67 Aligned_cols=12 Identities=42% Similarity=0.479 Sum_probs=6.1
Q ss_pred HHHHHHHHHHHH
Q 022054 8 IWAVITAVLASI 19 (303)
Q Consensus 8 ~~~~~~~~~~~~ 19 (303)
+..++.+++|++
T Consensus 7 ~~~vl~avlal~ 18 (39)
T 2l6w_A 7 KVVVISAILALV 18 (39)
Confidence 344555555554
Done!