BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022056
(303 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FPQ8|KNAT7_ARATH Homeobox protein knotted-1-like 7 OS=Arabidopsis thaliana GN=KNAT7
PE=2 SV=1
Length = 291
Score = 462 bits (1188), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/305 (74%), Positives = 257/305 (84%), Gaps = 18/305 (5%)
Query: 1 MQEPSLGVMGSSSSGGGGGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVA 60
MQE +LG+MG++ GG GD + +Q + +K EIA+HP+YEQLLAAHV+CLRVA
Sbjct: 1 MQEAALGMMGATV----GGDGDTAVVAEQN---RQLKGEIATHPMYEQLLAAHVACLRVA 53
Query: 61 TPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFK 120
TPIDQLP+I+AQL+QSHH+LRSY S + H+R ELDNFLAQY++VLC+FK
Sbjct: 54 TPIDQLPIIEAQLSQSHHLLRSYASTAVGYH--------HDRHELDNFLAQYVMVLCSFK 105
Query: 121 EQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASD 180
EQLQQHVRVHAVEAVM CREIEN L +LTG +LGEG+GATMS+DEDDL MDFS D S D
Sbjct: 106 EQLQQHVRVHAVEAVMACREIENNLHSLTGATLGEGSGATMSEDEDDLPMDFSSDNSGVD 165
Query: 181 ---SHDLMGFGPLLPTETERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPG 237
HD+ GFGPLLPTE+ERSLMERVRQELK+ELKQGFKSRIEDVREEI+RKRRAGKLPG
Sbjct: 166 FSGGHDMTGFGPLLPTESERSLMERVRQELKLELKQGFKSRIEDVREEIMRKRRAGKLPG 225
Query: 238 DTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSL 297
DTT+VLKNWWQQH KWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWH+NS S+TSL
Sbjct: 226 DTTTVLKNWWQQHCKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHNNSHSLTSL 285
Query: 298 KSKRK 302
KSKRK
Sbjct: 286 KSKRK 290
>sp|P46606|HD1_BRANA Homeobox protein HD1 OS=Brassica napus GN=HD1 PE=2 SV=1
Length = 294
Score = 452 bits (1162), Expect = e-126, Method: Compositional matrix adjust.
Identities = 214/270 (79%), Positives = 238/270 (88%), Gaps = 10/270 (3%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+K EIA+HP+Y+QLLAAHV+CLRVATPIDQLP+I+AQL+ SHH+LRSY S
Sbjct: 31 MKGEIATHPMYDQLLAAHVACLRVATPIDQLPIIEAQLSHSHHLLRSYASTAVG------ 84
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGE 155
S H+RQELDNFLAQY++VLC+FKEQLQQHVRVHAVEAVM CREIEN L +LTG +LGE
Sbjct: 85 -FSHHDRQELDNFLAQYVMVLCSFKEQLQQHVRVHAVEAVMACREIENNLHSLTGATLGE 143
Query: 156 GTGATMSDDEDDLHMDFSLDQSASD---SHDLMGFGPLLPTETERSLMERVRQELKIELK 212
G+GATMS+DEDDL MDFS D S D HD+ GFGPLLPTE+ERSLMERVRQELK+ELK
Sbjct: 144 GSGATMSEDEDDLQMDFSSDNSGVDFSGGHDMTGFGPLLPTESERSLMERVRQELKLELK 203
Query: 213 QGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQL 272
QGFKSRIEDVREEI+RKRRAGKLPGDTT+VLKNWWQQH KWPYPTEDDKAKLVEETGLQL
Sbjct: 204 QGFKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPTEDDKAKLVEETGLQL 263
Query: 273 KQINNWFINQRKRNWHSNSQSVTSLKSKRK 302
KQINNWFINQRKRNWH+NS S+TSLKSKRK
Sbjct: 264 KQINNWFINQRKRNWHNNSHSLTSLKSKRK 293
>sp|Q94LW3|KNOS3_ORYSJ Homeobox protein knotted-1-like 3 OS=Oryza sativa subsp. japonica
GN=HOS66 PE=2 SV=1
Length = 314
Score = 422 bits (1085), Expect = e-117, Method: Compositional matrix adjust.
Identities = 208/272 (76%), Positives = 236/272 (86%), Gaps = 10/272 (3%)
Query: 34 QLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNN 93
QL+K EIA HPL EQL+AAHV CLRVATPID LPLIDAQLAQS +L SY + ++
Sbjct: 51 QLLKGEIAVHPLCEQLVAAHVGCLRVATPIDHLPLIDAQLAQSSGLLHSYAA------HH 104
Query: 94 NHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSL 153
LSPH++QELD+FLAQY+++LC+F+EQLQQHVRVHAVEAVM CREIE +LQ LTG +L
Sbjct: 105 RPFLSPHDKQELDSFLAQYMMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGATL 164
Query: 154 GEGTGATMSDDEDDL--HMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIEL 211
EGTGATMS+DED+ ++ +D SD HDLMGFGPL+PT++ERSLMERVRQELKIEL
Sbjct: 165 EEGTGATMSEDEDETAPMLEGPMDM-GSDGHDLMGFGPLMPTDSERSLMERVRQELKIEL 223
Query: 212 KQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQ 271
KQGFKSRIEDVREEILRKRRAGKLPGDTT++LK WWQQHSKWPYPTEDDKAKLVEETGLQ
Sbjct: 224 KQGFKSRIEDVREEILRKRRAGKLPGDTTTILKQWWQQHSKWPYPTEDDKAKLVEETGLQ 283
Query: 272 LKQINNWFINQRKRNWHSNSQSVTSLKSKRKR 303
LKQINNWFINQRKRNWH+NSQ+ T LKSKRKR
Sbjct: 284 LKQINNWFINQRKRNWHNNSQTST-LKSKRKR 314
>sp|P48000|KNAT3_ARATH Homeobox protein knotted-1-like 3 OS=Arabidopsis thaliana GN=KNAT3
PE=1 SV=1
Length = 431
Score = 385 bits (989), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/305 (64%), Positives = 228/305 (74%), Gaps = 23/305 (7%)
Query: 8 VMGSSSSGGGGGGGDVSGHHDQTATVQLI----KAEIASHPLYEQLLAAHVSCLRVATPI 63
+ G +GGG D G V KAEI SHPLYEQLL+AHV+CLR+ATP+
Sbjct: 127 IQGEMKTGGGENKNDGGGATAADGVVSWQNARHKAEILSHPLYEQLLSAHVACLRIATPV 186
Query: 64 DQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQL 123
DQLP IDAQLAQS HV+ Y +L A + +ELD F+ Y+++LC+FKEQL
Sbjct: 187 DQLPRIDAQLAQSQHVVAKYSALGAAAQG-----LVGDDKELDQFMTHYVLLLCSFKEQL 241
Query: 124 QQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASDSH- 182
QQHVRVHA+EAVM C EIE +LQ+LTGVS GEG GATMSDDED+ Q SD++
Sbjct: 242 QQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGMGATMSDDEDE--------QVESDANM 293
Query: 183 -----DLMGFGPLLPTETERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPG 237
D++GFGPL+PTE+ERSLMERVRQELK ELKQG+K +I D+REEILRKRRAGKLPG
Sbjct: 294 FDGGLDVLGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPG 353
Query: 238 DTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSL 297
DTTSVLK WWQ HSKWPYPTE+DKA+LV+ETGLQLKQINNWFINQRKRNWHSN S T L
Sbjct: 354 DTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSSSTVL 413
Query: 298 KSKRK 302
K+KRK
Sbjct: 414 KNKRK 418
>sp|P48001|KNAT4_ARATH Homeobox protein knotted-1-like 4 OS=Arabidopsis thaliana GN=KNAT4
PE=2 SV=3
Length = 393
Score = 381 bits (978), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/272 (68%), Positives = 221/272 (81%), Gaps = 19/272 (6%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KAEI SHPLYEQLL+AHV+CLR+ATP+DQLP IDAQLAQS +V+ Y +L+ A
Sbjct: 124 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSTLEAA-----QG 178
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
L + +ELD+F+ Y+++LC+FKEQLQQHVRVHA+EAVM C EIE +LQ+ TGVS GEG
Sbjct: 179 LLAGDDKELDHFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSFTGVSPGEG 238
Query: 157 TGATMSDDEDDLHMDFSLDQSASDSH------DLMGFGPLLPTETERSLMERVRQELKIE 210
TGATMS+DED+ Q SD+H D +GFGPL+PTE+ERSLMERVRQELK E
Sbjct: 239 TGATMSEDEDE--------QVESDAHLFDGSLDGLGFGPLVPTESERSLMERVRQELKHE 290
Query: 211 LKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGL 270
LKQG+K +I D+REEILRKRRAGKLPGDTTSVLK+WWQ HSKWPYPTE+DKA+LV+ETGL
Sbjct: 291 LKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGL 350
Query: 271 QLKQINNWFINQRKRNWHSNSQSVTSLKSKRK 302
QLKQINNWFINQRKRNWHSN S T K+KR+
Sbjct: 351 QLKQINNWFINQRKRNWHSNPSSSTVSKNKRR 382
>sp|O04136|KNAP3_MALDO Homeobox protein knotted-1-like 3 OS=Malus domestica PE=2 SV=1
Length = 427
Score = 371 bits (952), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/268 (69%), Positives = 217/268 (80%), Gaps = 9/268 (3%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KAEI +HPLYE LL+AHV+CLR+ATP+DQLP IDAQLAQS +V+ Y +L ++
Sbjct: 168 KAEILAHPLYEPLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSALGNGMVGDD-- 225
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
+ELD F+ Y+++LC+FKEQLQQHVRVHA+EAVM C EIE +LQ+LTGVS GEG
Sbjct: 226 ------KELDQFMRNYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEG 279
Query: 157 TGATMSDDEDDLHMDFS-LDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQGF 215
T ATMSDDEDD + L + HD MGFGPL+PTE+ERSLMERVRQELK ELKQG+
Sbjct: 280 TSATMSDDEDDQVDSDANLFDEGMEGHDSMGFGPLIPTESERSLMERVRQELKHELKQGY 339
Query: 216 KSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQI 275
K +I D+REEILRKRRAGKLPGDTTSVLK WWQ HSKWPYPTE+DKA+LV+ETGLQLKQI
Sbjct: 340 KEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQI 399
Query: 276 NNWFINQRKRNWHSNSQSVTSLKSKRKR 303
NNWFINQRKRNWHSN + T LKSKRKR
Sbjct: 400 NNWFINQRKRNWHSNPSTSTVLKSKRKR 427
>sp|Q0J6N4|KNOSD_ORYSJ Homeobox protein knotted-1-like 13 OS=Oryza sativa subsp. japonica
GN=OSH45 PE=2 SV=2
Length = 374
Score = 365 bits (936), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/268 (67%), Positives = 214/268 (79%), Gaps = 10/268 (3%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
KAEI +HPLYEQLL+AHV+CLR+ATP+DQLP IDAQLAQS V+ Y +L A ++
Sbjct: 108 CKAEILAHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQGVVAKYSALAAAAAGDDG 167
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGE 155
+ELD F+ Y+++LC+FKEQLQQHVRVHA+EAVM C E+E LQ+LTG S GE
Sbjct: 168 -------RELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQNLQSLTGASPGE 220
Query: 156 GTGATMSDDEDD-LHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQG 214
GTGATMSD EDD + ++ + D D MGFG LPTE+ERSLMERVRQELK ELKQG
Sbjct: 221 GTGATMSDGEDDQADSEANMYDPSLDGADNMGFG--LPTESERSLMERVRQELKHELKQG 278
Query: 215 FKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQ 274
+K ++ D+REEILRKRRAGKLPGDTTS LK WWQ H+KWPYPTE+DKA+LV+ETGLQLKQ
Sbjct: 279 YKEKLIDIREEILRKRRAGKLPGDTTSTLKAWWQSHAKWPYPTEEDKARLVQETGLQLKQ 338
Query: 275 INNWFINQRKRNWHSNSQSVTSLKSKRK 302
INNWFINQRKRNWHSN S TS+K+KRK
Sbjct: 339 INNWFINQRKRNWHSNPSSSTSVKTKRK 366
>sp|O22300|LET12_SOLLC Homeobox protein knotted-1-like LET12 OS=Solanum lycopersicum
GN=LET12 PE=2 SV=1
Length = 426
Score = 350 bits (899), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 178/257 (69%), Positives = 209/257 (81%), Gaps = 10/257 (3%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
KA+I +HPLY+QLL+AHVSCLR+ATP+DQLP IDAQLAQS +V+ Y L Q
Sbjct: 163 CKADILNHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLAQSQNVVAKYSVLGQGQ----- 217
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGE 155
P + ++LD F+ Y+++L +FKEQLQQHVRVHA+EAVM C E+E +LQ+LTGV+ GE
Sbjct: 218 --PPLDDKDLDQFMTHYVLLLSSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVAPGE 275
Query: 156 GTGATMSDDEDDLHMDFS--LDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
GTGATMSDD+DD + LD D D MGFGPL+PTE+ERSLMERVRQELK ELKQ
Sbjct: 276 GTGATMSDDDDDQADSDTNFLD-GGFDGPDSMGFGPLVPTESERSLMERVRQELKHELKQ 334
Query: 214 GFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLK 273
G+K +I D+REEILRKRRAGKLPGDTTSVLK WWQ HSKWPYPTE+DKA+LV+ETGLQLK
Sbjct: 335 GYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLK 394
Query: 274 QINNWFINQRKRNWHSN 290
QINNWFINQRKRNWHSN
Sbjct: 395 QINNWFINQRKRNWHSN 411
>sp|P48002|KNAT5_ARATH Homeobox protein knotted-1-like 5 OS=Arabidopsis thaliana GN=KNAT5
PE=1 SV=2
Length = 383
Score = 350 bits (898), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 177/271 (65%), Positives = 212/271 (78%), Gaps = 14/271 (5%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KA I HP+YEQLLAAHV+CLRVATP+DQ+P IDAQL+Q H V Y +L +N
Sbjct: 119 KAAILRHPMYEQLLAAHVACLRVATPVDQIPRIDAQLSQLHTVAAKYSTLGVVVDN---- 174
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
+ELD+F++ Y+++LC+FKEQLQ HV VHA+EA+ C EIE +LQ+LTGVS E
Sbjct: 175 ------KELDHFMSHYVVLLCSFKEQLQHHVCVHAMEAITACWEIEQSLQSLTGVSPSES 228
Query: 157 TGATMSDDEDDLHMDFS---LDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
G TMSDDEDD ++ D S S LMGFGPL+PTE ERSLMERV++ELK ELKQ
Sbjct: 229 NGKTMSDDEDDNQVESEVNMFDGSLDGSDCLMGFGPLVPTERERSLMERVKKELKHELKQ 288
Query: 214 GFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLK 273
GFK +I D+REEI+RKRRAGKLPGDTTSVLK WW+ HSKWPYPTE+DKAKLV+ETGLQLK
Sbjct: 289 GFKEKIVDIREEIMRKRRAGKLPGDTTSVLKEWWRTHSKWPYPTEEDKAKLVQETGLQLK 348
Query: 274 QINNWFINQRKRNWHSNSQSVTSL-KSKRKR 303
QINNWFINQRKRNW+SNS + ++L K+KRKR
Sbjct: 349 QINNWFINQRKRNWNSNSSTSSTLTKNKRKR 379
>sp|Q0E3C3|KNOS2_ORYSJ Homeobox protein knotted-1-like 2 OS=Oryza sativa subsp. japonica
GN=HOS58 PE=2 SV=2
Length = 313
Score = 344 bits (883), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 174/268 (64%), Positives = 209/268 (77%), Gaps = 10/268 (3%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KA +A+HPLYE+LL AHV+CLRVATP+DQLP IDAQ+A L + + A +
Sbjct: 43 KAAVAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAASAAAAAGGPSG-- 100
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
+ELD F+ Y+++LC+FKEQLQQHVRVHA+EAVMGC E+E +LQ+LTG S GEG
Sbjct: 101 -----GEELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEG 155
Query: 157 TGATMSDDEDDLHMDFSLDQ-SASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQGF 215
TGATMSDDED+ +D + +D D MGFGPL+ TE ERSL+ERVR ELK ELKQG+
Sbjct: 156 TGATMSDDEDN-QVDSEANMFDGNDGSDGMGFGPLMLTEGERSLVERVRHELKNELKQGY 214
Query: 216 KSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQI 275
K ++ D+REEILRKRRAGKLPGDT S+LK WWQ HSKWPYPTEDDKA+LV+ETGLQLKQI
Sbjct: 215 KEKLVDIREEILRKRRAGKLPGDTASILKAWWQAHSKWPYPTEDDKARLVQETGLQLKQI 274
Query: 276 NNWFINQRKRNWHSNSQSVTSLKSKRKR 303
NNWFINQRKRNWHSN S + K+K+KR
Sbjct: 275 NNWFINQRKRNWHSNPAS-SGEKTKKKR 301
>sp|Q94LW4|KNOSB_ORYSJ Homeobox protein knotted-1-like 11 OS=Oryza sativa subsp. japonica
GN=HOS59 PE=2 SV=2
Length = 323
Score = 332 bits (851), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 167/254 (65%), Positives = 196/254 (77%), Gaps = 3/254 (1%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KA IA+HPLYE+LL AHV+CLRVATP+DQLP IDAQ+A L + + A
Sbjct: 48 KAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAATAAAAAAAAGGAP 107
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
+ELD F+ Y+++LC+FKEQLQQHVRVHA+EAVM C E+E TLQ+LTG S EG
Sbjct: 108 SG---GEELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQTLQSLTGASPREG 164
Query: 157 TGATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQGFK 216
+GATMSDDED+ S +D D MGFGPL+ TE ERSL+ERVRQELK ELKQG++
Sbjct: 165 SGATMSDDEDNQVDSESNMFDGNDGSDGMGFGPLMLTEGERSLVERVRQELKHELKQGYR 224
Query: 217 SRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQIN 276
++ D+REEILRKRRAGKLPGDT S LK WWQ HSKWPYPTE+DKA+LV+ETGLQLKQIN
Sbjct: 225 EKLVDIREEILRKRRAGKLPGDTASTLKAWWQAHSKWPYPTEEDKARLVQETGLQLKQIN 284
Query: 277 NWFINQRKRNWHSN 290
NWFINQRKRNWHSN
Sbjct: 285 NWFINQRKRNWHSN 298
>sp|P56659|KNOX1_MAIZE Homeobox protein knotted-1-like 1 (Fragment) OS=Zea mays GN=KNOX1
PE=2 SV=1
Length = 88
Score = 180 bits (456), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 83/88 (94%), Positives = 87/88 (98%)
Query: 203 VRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKA 262
VRQELK+ELKQGFKSRIEDVREEILRKRRAGKLPGDTTS+LK WWQ+HSKWPYPTEDDKA
Sbjct: 1 VRQELKLELKQGFKSRIEDVREEILRKRRAGKLPGDTTSILKQWWQEHSKWPYPTEDDKA 60
Query: 263 KLVEETGLQLKQINNWFINQRKRNWHSN 290
KLVEETGLQLKQINNWFINQRKRNWH+N
Sbjct: 61 KLVEETGLQLKQINNWFINQRKRNWHNN 88
>sp|P56665|KNOX7_MAIZE Homeobox protein knotted-1-like 7 (Fragment) OS=Zea mays GN=KNOX7
PE=2 SV=1
Length = 85
Score = 159 bits (403), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 72/85 (84%), Positives = 79/85 (92%)
Query: 206 ELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLV 265
ELK ELKQG+K ++ D+REEI+RKRRAGKLPGDT SVLK WWQ HSKWPYPTEDDKA+LV
Sbjct: 1 ELKNELKQGYKEKLVDIREEIMRKRRAGKLPGDTASVLKAWWQAHSKWPYPTEDDKARLV 60
Query: 266 EETGLQLKQINNWFINQRKRNWHSN 290
+ETGLQLKQINNWFINQRKRNWHSN
Sbjct: 61 QETGLQLKQINNWFINQRKRNWHSN 85
>sp|P56664|KNOX6_MAIZE Homeobox protein knotted-1-like 6 (Fragment) OS=Zea mays GN=KNOX6
PE=2 SV=1
Length = 85
Score = 159 bits (403), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 72/85 (84%), Positives = 79/85 (92%)
Query: 206 ELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLV 265
ELK ELKQG+K ++ D+REEI+RKRRAGKLPGDT SVLK WWQ HSKWPYPTEDDKA+LV
Sbjct: 1 ELKNELKQGYKEKLVDIREEIMRKRRAGKLPGDTASVLKAWWQAHSKWPYPTEDDKARLV 60
Query: 266 EETGLQLKQINNWFINQRKRNWHSN 290
+ETGLQLKQINNWFINQRKRNWHSN
Sbjct: 61 QETGLQLKQINNWFINQRKRNWHSN 85
>sp|P56660|KNOX2_MAIZE Homeobox protein knotted-1-like 2 (Fragment) OS=Zea mays GN=KNOX2
PE=2 SV=1
Length = 88
Score = 159 bits (402), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 72/88 (81%), Positives = 81/88 (92%)
Query: 203 VRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKA 262
VRQELK ELKQG++ ++ D+REEILRKRRAGKLPGDT S LK WWQ HSKWPYPTE+DKA
Sbjct: 1 VRQELKHELKQGYRDKLVDIREEILRKRRAGKLPGDTASTLKAWWQAHSKWPYPTEEDKA 60
Query: 263 KLVEETGLQLKQINNWFINQRKRNWHSN 290
+LV+ETGLQLKQINNWFINQRKRNWH+N
Sbjct: 61 RLVQETGLQLKQINNWFINQRKRNWHNN 88
>sp|P46640|KNAT2_ARATH Homeobox protein knotted-1-like 2 OS=Arabidopsis thaliana GN=KNAT2
PE=1 SV=3
Length = 310
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 128/266 (48%), Gaps = 51/266 (19%)
Query: 32 TVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANN 91
++ +IK++IASHPLY +LL ++ C +V P++ +++ ++H R L
Sbjct: 65 SLSVIKSKIASHPLYPRLLQTYIDCQKVGAPMEIACILEEIQRENHVYKRDVAPLSCFGA 124
Query: 92 NNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGV 151
+ ELD F+ Y +L +K L + EA +IE LQ L
Sbjct: 125 D----------PELDEFMETYCDILVKYKTDLARPFD----EATTFINKIEMQLQNLCT- 169
Query: 152 SLGEGTGATMSDD----------EDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLME 201
G + +SDD EDD D + D S S+D
Sbjct: 170 --GPASATALSDDGAVSSDEELREDD---DIAADDSQQRSND------------------ 206
Query: 202 RVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDK 261
++LK +L + F S I ++ E +K++ GKLP + L +WW H+KWPYPTE DK
Sbjct: 207 ---RDLKDQLLRKFGSHISSLKLEFSKKKKKGKLPREARQALLDWWNVHNKWPYPTEGDK 263
Query: 262 AKLVEETGLQLKQINNWFINQRKRNW 287
L EETGL KQINNWFINQRKR+W
Sbjct: 264 ISLAEETGLDQKQINNWFINQRKRHW 289
>sp|Q10ED2|KNOS8_ORYSJ Homeobox protein knotted-1-like 8 OS=Oryza sativa subsp. japonica
GN=OSH43 PE=2 SV=1
Length = 341
Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 131/283 (46%), Gaps = 58/283 (20%)
Query: 23 VSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRS 82
V G +KAEI SHP Y LLAA++ C +V P D L + A A
Sbjct: 70 VQGQVSPAGAEAAVKAEIMSHPQYSALLAAYLGCKKVGAPPDVLTKLTAVPAA------- 122
Query: 83 YGSLQQANNNNNHSLSPHERQ------ELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVM 136
QQ + + H HE Q +LD F+ Y +L ++E+L++ + +EA
Sbjct: 123 ----QQLDEADGHPRRRHEPQRDDDPDQLDQFMDAYCSMLTRYREELERPI----LEAAE 174
Query: 137 GCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETE 196
+E L +L + EGTG+ S++E D SD
Sbjct: 175 FFSRVETQLDSLAESNC-EGTGS--SEEEQD----------PSD---------------- 205
Query: 197 RSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYP 256
++LK +L + + + D+R+ ++ + GKLP + L +WW+ H KWPYP
Sbjct: 206 --------KQLKHQLLRKYGGSLGDLRQVFSKRTKKGKLPKEARQKLLHWWELHYKWPYP 257
Query: 257 TEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKS 299
+E +K L + TGL KQINNWFINQRKR+W + T+ +
Sbjct: 258 SEMEKMTLAQTTGLDQKQINNWFINQRKRHWKPTPVAGTAFPT 300
>sp|Q7GDL5|KNOSA_ORYSJ Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. japonica
GN=OSH71 PE=2 SV=1
Length = 311
Score = 120 bits (302), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 91/255 (35%), Positives = 122/255 (47%), Gaps = 28/255 (10%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNN 92
+L+KA+IA HP Y LL+A++ C +V P + L++ + A
Sbjct: 52 TELMKAQIAGHPSYPSLLSAYIECRKVGAPPEVTTLLEEIGREGRG------GGGGATAG 105
Query: 93 NNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVS 152
L P ELD F+ Y VL +KE+L + EA I L +L G
Sbjct: 106 GEIGLDP----ELDEFMETYCRVLERYKEELTRPFD----EAASFLTGIHTQLASLCG-- 155
Query: 153 LGEGTGATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELK 212
GA D D + S D+ S D FG E L + +E+ ++
Sbjct: 156 -----GAPPPTDNSDEMVGSSEDEPCSGDADAADFG----QEHSSRLADHELKEMLLKKY 206
Query: 213 QGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQL 272
G SR+ R E L+KR+ GKLP D S L +WW H +WPYPTE+DK +L TGL
Sbjct: 207 SGCLSRL---RSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDP 263
Query: 273 KQINNWFINQRKRNW 287
KQINNWFINQRKR+W
Sbjct: 264 KQINNWFINQRKRHW 278
>sp|A2Y007|KNOSA_ORYSI Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. indica
GN=OSH71 PE=2 SV=2
Length = 311
Score = 120 bits (302), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 91/255 (35%), Positives = 122/255 (47%), Gaps = 28/255 (10%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNN 92
+L+KA+IA HP Y LL+A++ C +V P + L++ + A
Sbjct: 52 TELMKAQIAGHPSYPSLLSAYIECRKVGAPPEVTTLLEEIGREGRG------GGGGATAG 105
Query: 93 NNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVS 152
L P ELD F+ Y VL +KE+L + EA I L +L G
Sbjct: 106 GEIGLDP----ELDEFMETYCRVLERYKEELTRPFD----EAASFLTGIHTQLASLCG-- 155
Query: 153 LGEGTGATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELK 212
GA D D + S D+ S D FG E L + +E+ ++
Sbjct: 156 -----GAPPPTDNSDEMVGSSEDEPCSGDADAADFG----QEHSSRLADHELKEMLLKKY 206
Query: 213 QGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQL 272
G SR+ R E L+KR+ GKLP D S L +WW H +WPYPTE+DK +L TGL
Sbjct: 207 SGCLSRL---RSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDP 263
Query: 273 KQINNWFINQRKRNW 287
KQINNWFINQRKR+W
Sbjct: 264 KQINNWFINQRKRHW 278
>sp|Q84JS6|KNAT6_ARATH Homeobox protein knotted-1-like 6 OS=Arabidopsis thaliana GN=KNAT6
PE=1 SV=1
Length = 327
Score = 117 bits (294), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 91/265 (34%), Positives = 131/265 (49%), Gaps = 39/265 (14%)
Query: 27 HDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSL 86
+D ++ +IKA+IA HP Y +LL A++ C +V P + L++ ++ + V +
Sbjct: 76 NDDNVSLTVIKAKIACHPSYPRLLQAYIDCQKVGAPPEIACLLE-EIQRESDVYK----- 129
Query: 87 QQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQ 146
Q+ ++ P ELD F+ Y +L +K L + EA +IE L+
Sbjct: 130 QEVVPSSCFGADP----ELDEFMETYCDILVKYKSDLARPFD----EATCFLNKIEMQLR 181
Query: 147 AL-TGVSLGEGT---GATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMER 202
L TGV G G SD+E S D H++ E R E
Sbjct: 182 NLCTGVESARGVSEDGVISSDEE----------LSGGD-HEV--------AEDGRQRCED 222
Query: 203 VRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKA 262
++LK L + F SRI ++ E +K++ GKLP + L +WW H KWPYPTE DK
Sbjct: 223 --RDLKDRLLRKFGSRISTLKLEFSKKKKKGKLPREARQALLDWWNLHYKWPYPTEGDKI 280
Query: 263 KLVEETGLQLKQINNWFINQRKRNW 287
L + TGL KQINNWFINQRKR+W
Sbjct: 281 ALADATGLDQKQINNWFINQRKRHW 305
>sp|Q9FP29|KNOS1_ORYSJ Homeobox protein knotted-1-like 1 OS=Oryza sativa subsp. japonica
GN=OSH6 PE=2 SV=1
Length = 301
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 125/256 (48%), Gaps = 27/256 (10%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNN 92
+L+KA+IA HP Y LL+A++ C +V P + L+ + R +
Sbjct: 40 TELMKAQIAGHPRYPTLLSAYIECRKVGAPPEVASLL-------KEIGRERRAGGGGGGA 92
Query: 93 NNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL-TGV 151
+ P ELD F+ Y VL +KE+L + EA I+ L L +G
Sbjct: 93 GQIGVDP----ELDEFMEAYCRVLVRYKEELSRPFD----EAASFLSSIQTQLSNLCSGA 144
Query: 152 SLGEGTGATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIEL 211
+ T AT SD+ + S + S D++ G E L + +E+ ++
Sbjct: 145 TSPPATTATHSDE----MVGSSDEDQCSGETDMLDIG----QEQSSRLADHELKEMLLKK 196
Query: 212 KQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQ 271
G SR+ R E L+KR+ GKLP D S L WW H +WPYPTE+DK +L TGL
Sbjct: 197 YSGCLSRL---RSEFLKKRKKGKLPKDARSALLEWWNTHYRWPYPTEEDKLRLAARTGLD 253
Query: 272 LKQINNWFINQRKRNW 287
KQINNWFINQRKR+W
Sbjct: 254 PKQINNWFINQRKRHW 269
>sp|Q43484|KNOX3_HORVU Homeobox protein KNOX3 OS=Hordeum vulgare GN=KNOX3 PE=1 SV=1
Length = 364
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 129/260 (49%), Gaps = 36/260 (13%)
Query: 30 TATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQA 89
A V+ IKA+I SHP Y LLAA++ C +V P P + A+L L L+Q
Sbjct: 102 AADVEAIKAKIISHPHYSSLLAAYLDCQKVGAP----PEVSARLTAVAQDLE----LRQR 153
Query: 90 NNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
L ELD F+ Y +L ++E+L + ++ EA+ R +E L +L+
Sbjct: 154 TALGG--LGTATEPELDQFMEAYHEMLVKYREELTRPLQ----EAMEFLRRVETQLNSLS 207
Query: 150 --GVSLGEGTGATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQEL 207
G SL +T S +ED + D+H V QEL
Sbjct: 208 ISGRSL-RNILSTGSSEEDQEGSGGETELPEIDAHG-------------------VDQEL 247
Query: 208 KIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEE 267
K L + + + +++E+ +K++ GKLP + L +WW+ H KWPYP+E K L E
Sbjct: 248 KHHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQQLLSWWEMHYKWPYPSESQKVALAES 307
Query: 268 TGLQLKQINNWFINQRKRNW 287
TGL LKQINNWFINQRKR+W
Sbjct: 308 TGLDLKQINNWFINQRKRHW 327
>sp|P46609|KNOS6_ORYSJ Homeobox protein knotted-1-like 6 OS=Oryza sativa subsp. japonica
GN=OSH1 PE=2 SV=2
Length = 361
Score = 115 bits (287), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/257 (34%), Positives = 128/257 (49%), Gaps = 36/257 (14%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNN 92
V+ IKA+I SHP Y LLAA++ C +V P P + A+L L+
Sbjct: 101 VEAIKAKIISHPHYSSLLAAYLDCQKVGAP----PEVAARLTAVAQ------DLELRQRT 150
Query: 93 NNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVS 152
L ELD F+ Y +L ++E+L + ++ EA+ R +E L L+
Sbjct: 151 ALGVLGAATEPELDQFMEAYHEMLVKYREELTRPLQ----EAMEFLRRVETQLNTLSI-- 204
Query: 153 LGEGTGATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMER--VRQELKIE 210
+G ++ + + S S D G G ETE ++ V QELK
Sbjct: 205 ----SGRSLRN----------ILSSGSSEEDQEGSG----GETELPEIDAHGVDQELKHH 246
Query: 211 LKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGL 270
L + + + +++E+ +K++ GKLP D L NWW+ H KWPYP+E K L E TGL
Sbjct: 247 LLKKYSGYLSSLKQELSKKKKKGKLPKDARQQLLNWWELHYKWPYPSESQKVALAESTGL 306
Query: 271 QLKQINNWFINQRKRNW 287
LKQINNWFINQRKR+W
Sbjct: 307 DLKQINNWFINQRKRHW 323
>sp|P24345|KN1_MAIZE Homeotic protein knotted-1 OS=Zea mays GN=KN-1 PE=2 SV=1
Length = 359
Score = 115 bits (287), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 147/312 (47%), Gaps = 60/312 (19%)
Query: 2 QEPSLG-------VMGSSSSGGGG--------GGG---------DVSGHHDQTATVQLIK 37
Q PS G V + +SGG G GGG + S V+ IK
Sbjct: 46 QPPSAGLPLTLNTVAATGNSGGSGNPVLQLANGGGLLDACVKAKEPSSSSPYAGDVEAIK 105
Query: 38 AEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSL 97
A+I SHP Y LL A++ C +V P P + A+L + ++ L
Sbjct: 106 AKIISHPHYYSLLTAYLECNKVGAP----PEVSARLTEIAQ------EVEARQRTALGGL 155
Query: 98 SPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGT 157
+ ELD F+ Y +L F+E+L + ++ EA+ R +E+ L +L+ +
Sbjct: 156 AAATEPELDQFMEAYHEMLVKFREELTRPLQ----EAMEFMRRVESQLNSLSI------S 205
Query: 158 GATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMER--VRQELKIELKQGF 215
G ++ + + S S D G G ETE ++ V QELK L + +
Sbjct: 206 GRSLRN----------ILSSGSSEEDQEGSG----GETELPEVDAHGVDQELKHHLLKKY 251
Query: 216 KSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQI 275
+ +++E+ +K++ GKLP + L +WW QH KWPYP+E K L E TGL LKQI
Sbjct: 252 SGYLSSLKQELSKKKKKGKLPKEARQQLLSWWDQHYKWPYPSETQKVALAESTGLDLKQI 311
Query: 276 NNWFINQRKRNW 287
NNWFINQRKR+W
Sbjct: 312 NNWFINQRKRHW 323
>sp|O04135|KNAP2_MALDO Homeobox protein knotted-1-like 2 OS=Malus domestica PE=2 SV=1
Length = 397
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 126/255 (49%), Gaps = 23/255 (9%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNN 92
V+ IKA+I +HP Y LL A++ C RV P D + + + RS G+ ++ + +
Sbjct: 129 VEAIKAKIIAHPQYSNLLEAYMDCQRVGAPSDVVARLSVARQEFEARQRSSGTSRETSKD 188
Query: 93 NNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVS 152
ELD F+ Y +L ++E+L + ++ EA+ R IE L L G +
Sbjct: 189 ----------PELDQFMEAYYDMLVKYREELTRPIQ----EAMDFMRRIETQLNML-GNN 233
Query: 153 LGEGTGATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELK 212
S ED S ++ +S + P +R ELK L
Sbjct: 234 NNAPPLRIFSPSEDKCEGIGSSEEEQENSGGETEVPEIDPRAEDR--------ELKNHLL 285
Query: 213 QGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQL 272
+ + + +++E+ +K++ GKLP D L +WW+ H KWPYP+E +K L E TGL
Sbjct: 286 RKYSGYLSSLKQELSKKKKKGKLPKDARQKLLSWWELHYKWPYPSESEKVALAESTGLDQ 345
Query: 273 KQINNWFINQRKRNW 287
KQINNWFINQRKR+W
Sbjct: 346 KQINNWFINQRKRHW 360
>sp|O04134|KNAP1_MALDO Homeobox protein knotted-1-like 1 OS=Malus domestica PE=2 SV=1
Length = 398
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 126/255 (49%), Gaps = 23/255 (9%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNN 92
V+ IKA+I +HP Y L+ A++ C RV P D +P + + RS G+ ++ + +
Sbjct: 130 VEAIKAKIIAHPQYSNLVEAYMDCQRVGAPSDVVPRLSVARQEFEARQRSSGTSRETSKD 189
Query: 93 NNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVS 152
ELD F+ Y +L ++E+L + ++ EA+ R IE L L G +
Sbjct: 190 ----------PELDQFMEAYYDMLVKYREELTRPIQ----EAMDFMRRIETQLNML-GNN 234
Query: 153 LGEGTGATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELK 212
S ED S + +S + P +R ELK L
Sbjct: 235 NNAPPLRIFSPSEDKCEGIGSSEDEQENSGGETEVPEIDPRAEDR--------ELKNHLL 286
Query: 213 QGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQL 272
+ + + +++E+ +K++ GKLP + L +WW+ H KWPYP+E +K L E TGL
Sbjct: 287 RKYSGYLSSLKQELSKKKKKGKLPKEARQKLLSWWELHYKWPYPSESEKVALAESTGLDQ 346
Query: 273 KQINNWFINQRKRNW 287
KQINNWFINQRKR+W
Sbjct: 347 KQINNWFINQRKRHW 361
>sp|Q75LX7|KNOS4_ORYSJ Homeobox protein knotted-1-like 4 OS=Oryza sativa subsp. japonica
GN=OSH10 PE=2 SV=1
Length = 337
Score = 112 bits (280), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 123/252 (48%), Gaps = 32/252 (12%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
IKA+I SHPLY LL A + C +V P P + +L+ L S + ++
Sbjct: 62 IKAKIMSHPLYPALLRAFIDCQKVGAP----PEVVGRLSALAGELDSRAEDRYLQGQSSD 117
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGE 155
ELD F+ Y+ +L +++++L + ++ EA R +E + + T
Sbjct: 118 P-------ELDEFMETYIDMLVSYRQELTRPIQ----EADQFFRNMEAQIDSFT------ 160
Query: 156 GTGATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQGF 215
DD + S D+ + D+ G LP T ++ ELK L +
Sbjct: 161 ------LDDNGSEGGNSSEDEQEAGGGDMASAG--LPEITSPCAEDK---ELKSHLLNKY 209
Query: 216 KSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQI 275
+ + E+ +K++ GKLP D L +WWQ H +WPYP+E +KA L E TGL KQI
Sbjct: 210 SGYLSSLWRELSKKKKKGKLPRDARQKLLHWWQLHYRWPYPSELEKAALAESTGLDAKQI 269
Query: 276 NNWFINQRKRNW 287
NNWFINQRKR+W
Sbjct: 270 NNWFINQRKRHW 281
>sp|Q41330|KN1_SOLLC Homeotic protein knotted-1 OS=Solanum lycopersicum GN=KN1 PE=2 SV=1
Length = 355
Score = 110 bits (276), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 138/277 (49%), Gaps = 37/277 (13%)
Query: 11 SSSSGGGGGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLID 70
+ +SGGG G G+V ++ +KA+I +HP LL A++ C +V P P +
Sbjct: 78 TETSGGGAGAGEV---------IEALKAKIIAHPQCSNLLDAYMDCQKVGAP----PEVA 124
Query: 71 AQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVH 130
A+L+ +R +Q + + +S + ELD F+ Y +L ++E+L + ++
Sbjct: 125 ARLS----AVRQEFEARQRRSLTDRDVS--KDPELDQFMEAYYDMLVKYREELTRPLQ-- 176
Query: 131 AVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASDSHDLMGFGPL 190
EA+ ++IE L L + + + ED S ++ +S +
Sbjct: 177 --EAMEFMQKIEAQLNMLGNAPV------RIFNSEDKCEGVGSSEEDQDNSGGETELPEI 228
Query: 191 LPTETERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQH 250
P +R ELK L + + + +++E+ +K++ GKLP D L WW+ H
Sbjct: 229 DPRAEDR--------ELKNHLLRKYSGYLSSLKQELSKKKKKGKLPKDARQKLITWWELH 280
Query: 251 SKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 287
KWPYP+E +K L E TGL KQINNWFINQRKR+W
Sbjct: 281 YKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHW 317
>sp|O80416|KNOSC_ORYSJ Homeobox protein knotted-1-like 12 OS=Oryza sativa subsp. japonica
GN=OSH15 PE=2 SV=1
Length = 355
Score = 108 bits (271), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 130/269 (48%), Gaps = 47/269 (17%)
Query: 30 TATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQA 89
A + IKA+I +HP Y LLAA++ C +V P + L + A A+ L
Sbjct: 85 AAEAESIKAKIMAHPQYSALLAAYLDCQKVGAPPEVLERLTATAAK----------LDAR 134
Query: 90 NNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
+ + P ELD F+ Y +L ++E+L + + EA+ + +E+ L +
Sbjct: 135 PPGRHDARDP----ELDQFMEAYCNMLAKYREELTRPID----EAMEFLKRVESQLDTIA 186
Query: 150 G-----------VSLGEGTGATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERS 198
G + L +G + EDD+ D S ++ P E +
Sbjct: 187 GGAHGGGAGSARLLLADGKSECVGSSEDDM------DPSGRENE---------PPEIDPR 231
Query: 199 LMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTE 258
++ ELK +L + + + +R+E +K++ GKLP + L +WW+ H KWPYP+E
Sbjct: 232 AEDK---ELKFQLLKKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPSE 288
Query: 259 DDKAKLVEETGLQLKQINNWFINQRKRNW 287
+K L E TGL KQINNWFINQRKR+W
Sbjct: 289 TEKIALAESTGLDQKQINNWFINQRKRHW 317
>sp|O65034|KNOSC_ORYSI Homeobox protein knotted-1-like 12 OS=Oryza sativa subsp. indica
GN=OSH15 PE=2 SV=2
Length = 355
Score = 108 bits (271), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 130/269 (48%), Gaps = 47/269 (17%)
Query: 30 TATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQA 89
A + IKA+I +HP Y LLAA++ C +V P + L + A A+ L
Sbjct: 85 AAEAESIKAKIMAHPQYSALLAAYLDCQKVGAPPEVLERLTATAAK----------LDAR 134
Query: 90 NNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
+ + P ELD F+ Y +L ++E+L + + EA+ + +E+ L +
Sbjct: 135 PPGRHDARDP----ELDQFMEAYCNMLAKYREELTRPID----EAMEFLKRVESQLDTIA 186
Query: 150 G-----------VSLGEGTGATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERS 198
G + L +G + EDD+ D S ++ P E +
Sbjct: 187 GGAHGGGAGSARLLLADGKSECVGSSEDDM------DPSGRENE---------PPEIDPR 231
Query: 199 LMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTE 258
++ ELK +L + + + +R+E +K++ GKLP + L +WW+ H KWPYP+E
Sbjct: 232 AEDK---ELKFQLLKKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPSE 288
Query: 259 DDKAKLVEETGLQLKQINNWFINQRKRNW 287
+K L E TGL KQINNWFINQRKR+W
Sbjct: 289 TEKIALAESTGLDQKQINNWFINQRKRHW 317
>sp|Q75LX9|KNOS5_ORYSJ Putative homeobox protein knotted-1-like 5 OS=Oryza sativa subsp.
japonica GN=Os03g0673500 PE=3 SV=1
Length = 337
Score = 108 bits (269), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 115/256 (44%), Gaps = 40/256 (15%)
Query: 35 LIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNN 94
+IKA+I SHPLY LL A V C +V P P + +L+ V Q + +
Sbjct: 70 MIKAKIMSHPLYPSLLRAFVDCKKVGAP----PEVVGRLSSLAVVT---DVPQYSGDRCL 122
Query: 95 HSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLG 154
+ P ELD F+ Y +L + ++L + ++ EA R IE + +L
Sbjct: 123 PAQQPAADPELDQFMETYCYMLTRYGQELARPIQ----EAEEFFRGIEEQIDSLA----- 173
Query: 155 EGTGATMSDDEDDLHMDFSLDQSASDSHDLMGFGP-LLPTETERSLMERVRQELKIELKQ 213
++D+ D+ + + FG + T T R LM +
Sbjct: 174 ---------LDEDVSYDYEDEVAGGLPEKSAAFGENEVTTTTRRHLMNK----------- 213
Query: 214 GFKSRIEDVREEILRKRR--AGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQ 271
+ + + EI K++ G LP D L WW H +WPYP+E +KA L E TGL
Sbjct: 214 -YSGYLNSLWTEISNKKKNSTGHLPRDARHKLLQWWHLHYRWPYPSEAEKAALAESTGLD 272
Query: 272 LKQINNWFINQRKRNW 287
KQ+ NWFINQRKR+W
Sbjct: 273 KKQVTNWFINQRKRHW 288
>sp|P46639|KNAT1_ARATH Homeobox protein knotted-1-like 1 OS=Arabidopsis thaliana GN=KNAT1
PE=1 SV=1
Length = 398
Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 129/259 (49%), Gaps = 27/259 (10%)
Query: 30 TATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQA 89
+ V+ +KA+I +HP Y LL A++ C ++ P D + I A + + + QQ
Sbjct: 128 VSDVEAMKAKIIAHPHYSTLLQAYLDCQKIGAPPDVVDRITA-------ARQDFEARQQ- 179
Query: 90 NNNNNHSLSPHERQ-ELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL 148
+ S+S R ELD F+ Y +L ++E+L + ++ EA+ R IE+ L L
Sbjct: 180 --RSTPSVSASSRDPELDQFMEAYCDMLVKYREELTRPIQ----EAMEFIRRIESQLSML 233
Query: 149 TGVSLGEGTGATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELK 208
+ D +M S ++ ++S + P +R ELK
Sbjct: 234 CQSPIHILNNPDGKSD----NMGSSDEEQENNSGGETELPEIDPRAEDR--------ELK 281
Query: 209 IELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEET 268
L + + + +++E+ +K++ GKLP + L WW+ H KWPYP+E +K L E T
Sbjct: 282 NHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSESEKVALAEST 341
Query: 269 GLQLKQINNWFINQRKRNW 287
GL KQINNWFINQRKR+W
Sbjct: 342 GLDQKQINNWFINQRKRHW 360
>sp|P46608|HSBH1_SOYBN Homeobox protein SBH1 OS=Glycine max GN=H1 PE=2 SV=1
Length = 379
Score = 105 bits (262), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 128/257 (49%), Gaps = 43/257 (16%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA+I +HP Y +LLAA+V+C +V P P + A+L ++ + A ++
Sbjct: 124 VKAKIMAHPHYHRLLAAYVNCQKVGAP----PEVVARLEEACASAATMAGGDAAAGSSCI 179
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT----GV 151
P LD F+ Y +L ++++L + ++ EA++ + IE + LT
Sbjct: 180 GEDP----ALDQFMEAYCEMLTKYEQELSKPLK----EAMLFLQRIECQFKNLTISSSDF 231
Query: 152 SLGEGTGATMSDDED-DLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIE 210
+ EG S +ED DLH +D A D ++LK +
Sbjct: 232 ASNEGGDRNGSSEEDVDLHN--MIDPQAED------------------------RDLKGQ 265
Query: 211 LKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGL 270
L + + + +++E ++KR+ GKLP + L WW +H KWPYP+E K L E TGL
Sbjct: 266 LLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLEWWNRHYKWPYPSESQKLALAESTGL 325
Query: 271 QLKQINNWFINQRKRNW 287
KQINNWFINQRKR+W
Sbjct: 326 DQKQINNWFINQRKRHW 342
>sp|Q41853|RSH1_MAIZE Homeobox protein rough sheath 1 OS=Zea mays GN=RS1 PE=2 SV=1
Length = 351
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 124/254 (48%), Gaps = 44/254 (17%)
Query: 42 SHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHE 101
+HP Y LLAA++ C +V P D L + A A+ L + + P
Sbjct: 96 AHPQYSALLAAYLDCQKVGAPPDVLERLTAMAAK----------LDASAAGRHEPRDP-- 143
Query: 102 RQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTG--------VSL 153
ELD F+ Y +L ++E+L + + EA+ + +E L ++G +SL
Sbjct: 144 --ELDQFMEAYCNMLVKYREELTRPID----EAMEFLKRVEAQLDCISGGGGSSSARLSL 197
Query: 154 GEGTGATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
+G + EDD+ D + ++ P E + ++ ELK +L +
Sbjct: 198 ADGKSEGVGSSEDDM------DPNGREND---------PPEIDPRAEDK---ELKYQLLK 239
Query: 214 GFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLK 273
+ + +R+E +K++ GKLP + L +WW+ H KWPYP+E +K L E TGL K
Sbjct: 240 KYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPSETEKIALAESTGLDQK 299
Query: 274 QINNWFINQRKRNW 287
QINNWFINQRKR+W
Sbjct: 300 QINNWFINQRKRHW 313
>sp|Q9M6D9|STM_BRAOL Homeobox protein SHOOT MERISTEMLESS OS=Brassica oleracea GN=STM
PE=2 SV=1
Length = 383
Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 131/262 (50%), Gaps = 48/262 (18%)
Query: 35 LIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNN 94
L+KA+I +HP Y +LL A+V+C +V P P + A+L ++ + +
Sbjct: 122 LVKAKIMAHPHYHRLLLAYVNCQKVGAP----PEVQARLEETCSSAAAAAASMGPTG--- 174
Query: 95 HSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSL- 153
S E LD F+ Y +L ++++L + + EA++ + +E ++L+ S
Sbjct: 175 ---SLGEDPGLDQFMEAYCEMLVKYEQELSKPFK----EAMVFLQHVECQFKSLSLSSPS 227
Query: 154 --GEGTGAT------MSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQ 205
G G A S++E D++ +F +D A D +
Sbjct: 228 SLGYGEAAIERNNNGSSEEEVDMNNEF-VDPQAED------------------------R 262
Query: 206 ELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLV 265
ELK +L + + + +++E ++KR+ GKLP + L +WW +H KWPYP+E K L
Sbjct: 263 ELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSEQQKLALA 322
Query: 266 EETGLQLKQINNWFINQRKRNW 287
E TGL KQINNWFINQRKR+W
Sbjct: 323 ESTGLDQKQINNWFINQRKRHW 344
>sp|Q38874|STM_ARATH Homeobox protein SHOOT MERISTEMLESS OS=Arabidopsis thaliana GN=STM
PE=1 SV=2
Length = 382
Score = 97.8 bits (242), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 129/262 (49%), Gaps = 49/262 (18%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA+I +HP Y +LLAA+V+C +V P + + ++ + + S G
Sbjct: 121 VKAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACSSAAAAAASMGPTGCLG----- 175
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGE 155
E LD F+ Y +L ++++L + + EA++ + +E ++L+ S
Sbjct: 176 -----EDPGLDQFMEAYCEMLVKYEQELSKPFK----EAMVFLQRVECQFKSLSLSSPSS 226
Query: 156 --GTGATM--------SDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQ 205
G G T S++E D++ +F +D A D +
Sbjct: 227 FSGYGETAIDRNNNGSSEEEVDMNNEF-VDPQAED------------------------R 261
Query: 206 ELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLV 265
ELK +L + + + +++E ++KR+ GKLP + L +WW +H KWPYP+E K L
Sbjct: 262 ELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSEQQKLALA 321
Query: 266 EETGLQLKQINNWFINQRKRNW 287
E TGL KQINNWFINQRKR+W
Sbjct: 322 ESTGLDQKQINNWFINQRKRHW 343
>sp|O22299|LET6_SOLLC Homeobox protein knotted-1-like LET6 OS=Solanum lycopersicum
GN=LET6 PE=2 SV=1
Length = 355
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 127/254 (50%), Gaps = 45/254 (17%)
Query: 42 SHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHE 101
+HP Y +LL A+++C ++ P P + A+L + + + + +++++ E
Sbjct: 102 AHPHYHRLLTAYLNCQKIGAP----PEVVARLEE----ICATSATMGRSSSSSGGGIIGE 153
Query: 102 RQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGV-------SLG 154
LD F+ Y +L ++++L + + EA++ IE +ALT +LG
Sbjct: 154 DPALDQFMEAYCEMLTKYEQELSKPFK----EAMVFLSRIECQFKALTLAPNSSHESALG 209
Query: 155 EGTGATMSDDED-DLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
E S DE+ D++ F +D A D +ELK +L +
Sbjct: 210 EAMDRNGSSDEEVDVNNSF-IDPQAED------------------------RELKGQLLR 244
Query: 214 GFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLK 273
+ + +++E ++KR+ GKLP + L +WW +H KWPYP+E K L E TGL K
Sbjct: 245 KYSGYLGSLKQEFMKKRKKGKLPKEARQQLVDWWLRHIKWPYPSESQKLALAESTGLDQK 304
Query: 274 QINNWFINQRKRNW 287
QINNWFINQRKR+W
Sbjct: 305 QINNWFINQRKRHW 318
>sp|Q10EC6|KNOS9_ORYSJ Homeobox protein knotted-1-like 9 OS=Oryza sativa subsp. japonica
GN=Os03g0772100 PE=2 SV=2
Length = 347
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 116/253 (45%), Gaps = 44/253 (17%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KAEI SHP Y LLAA++ C +V P D L + A A + + G ++ +
Sbjct: 81 MKAEIMSHPQYSALLAAYLGCKKVGAPPDVLTKLTAVPAAQQQLDAADGHPRRRHEPRRD 140
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGE 155
P +LD F+ V+ A A G R + L ++ + E
Sbjct: 141 DDVPD--HQLDQFMHA-------------DEVQGGAGAADPGSRGVLQ-LDSIADSNC-E 183
Query: 156 GTGATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQGF 215
GTG+ S++E D + + SD ++LK +L +
Sbjct: 184 GTGS--SEEEQDTSCPEAEEIDPSD------------------------KQLKHQLLMKY 217
Query: 216 KSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQH-SKWPYPTEDDKAKLVEETGLQLKQ 274
+ D+R+ ++ + GKLP + L +WW+ H KWPYP+E +K L + TGL KQ
Sbjct: 218 GGSLGDLRQAFSKRTKKGKLPKEARLKLLHWWELHYDKWPYPSEVEKMTLAQTTGLDQKQ 277
Query: 275 INNWFINQRKRNW 287
I+NWFINQRKR+W
Sbjct: 278 ISNWFINQRKRHW 290
>sp|P56667|KNX10_MAIZE Homeobox protein knotted-1-like 10 (Fragment) OS=Zea mays GN=KNOX10
PE=3 SV=1
Length = 88
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 55/82 (67%)
Query: 206 ELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLV 265
+LK L + + + E+ RK++ GKLP D L +WWQ H +WPYP+E +KA L
Sbjct: 4 DLKNRLLNKYSGYLSSLWRELSRKKKKGKLPRDARQKLLHWWQLHYRWPYPSELEKAALA 63
Query: 266 EETGLQLKQINNWFINQRKRNW 287
E TGL+ KQINNWFINQRKR+W
Sbjct: 64 ESTGLEAKQINNWFINQRKRHW 85
>sp|P56668|KNX11_MAIZE Homeobox protein knotted-1-like 11 (Fragment) OS=Zea mays GN=KNOX11
PE=3 SV=1
Length = 88
Score = 85.9 bits (211), Expect = 4e-16, Method: Composition-based stats.
Identities = 45/83 (54%), Positives = 57/83 (68%)
Query: 205 QELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKL 264
+ELK L + + + +R E L+KR+ GKLP D S L +WW H +WPYPTE+DK +L
Sbjct: 3 RELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKVRL 62
Query: 265 VEETGLQLKQINNWFINQRKRNW 287
TGL KQINNWFINQRKR+W
Sbjct: 63 AAATGLDPKQINNWFINQRKRHW 85
>sp|Q948L5|KNOS7_ORYSJ Homeobox protein knotted-1-like 7 OS=Oryza sativa subsp. japonica
GN=OSH3 PE=2 SV=1
Length = 365
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 121/263 (46%), Gaps = 28/263 (10%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA I SHP Y +LLAA + C +V P + R + Q+A +
Sbjct: 73 VKARIVSHPRYHRLLAAFLDCHKVGCPA-------EAAEEIAAAARVREARQRAAAAASR 125
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGE 155
E ELD F+ Y +L KE+L + ++ EA R +E+ L ++ G
Sbjct: 126 MPPAPEDPELDQFMEDYCKLLVECKEELSRPLQ----EAEEFLRTVESELNSINS---GP 178
Query: 156 GTGATMSDDEDDLHMDFSLDQSASDSHDLM------GFGPLLPTETERSLMERVRQELKI 209
A +S+ + L + ++M G + P +++L K
Sbjct: 179 PLTALISESKAGLDSSDDDEHEDGSGMEMMEAAEDEDLGIIDPRSDDKAL--------KR 230
Query: 210 ELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETG 269
L + + + +R+E+ +KR+ GKLP + L WW+ H +WP P+E +K L E TG
Sbjct: 231 HLLRKYSGYLGGLRKELSKKRKKGKLPKEARQKLLTWWELHYRWPNPSEMEKIALAESTG 290
Query: 270 LQLKQINNWFINQRKRNWHSNSQ 292
L+ KQINN FINQRKR+W +
Sbjct: 291 LEQKQINNCFINQRKRHWKPTEE 313
>sp|P56663|KNOX5_MAIZE Homeobox protein knotted-1-like 5 (Fragment) OS=Zea mays GN=KNOX5
PE=2 SV=1
Length = 85
Score = 82.0 bits (201), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 56/82 (68%)
Query: 206 ELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLV 265
ELK L + + + +R E L+KR+ GKLP D S L +WW H +WPYPTE+DK +L
Sbjct: 1 ELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKVRLA 60
Query: 266 EETGLQLKQINNWFINQRKRNW 287
TGL KQINNWFINQRKR+W
Sbjct: 61 AMTGLDPKQINNWFINQRKRHW 82
>sp|P56669|HLG3_MAIZE Homeobox protein liguleless 3 (Fragment) OS=Zea mays GN=LG3 PE=3
SV=1
Length = 85
Score = 81.3 bits (199), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 56/82 (68%)
Query: 206 ELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLV 265
ELK L + + + +R E L+KR+ GKLP D +VL WW H +WPYPTE+DK +L
Sbjct: 1 ELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARTVLLEWWNTHYRWPYPTEEDKVRLA 60
Query: 266 EETGLQLKQINNWFINQRKRNW 287
TGL KQINNWFINQRKR+W
Sbjct: 61 AMTGLDPKQINNWFINQRKRHW 82
>sp|P56662|KNOX4_MAIZE Homeobox protein knotted-1-like 4 (Fragment) OS=Zea mays GN=KNOX4
PE=2 SV=1
Length = 85
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 56/82 (68%)
Query: 206 ELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLV 265
ELK +L + + + +R+E +K++ GKLP + L +WW+ H KWPYP+E +K L
Sbjct: 1 ELKYQLLKKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPSETEKIALA 60
Query: 266 EETGLQLKQINNWFINQRKRNW 287
E TGL KQINNWFINQRKR+W
Sbjct: 61 EATGLDQKQINNWFINQRKRHW 82
>sp|Q54VB4|HBX9_DICDI Homeobox protein 9 OS=Dictyostelium discoideum GN=hbx9 PE=3 SV=1
Length = 639
Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 42/60 (70%)
Query: 226 ILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKR 285
I+++++ GKLPG+ TS+LK W +H+ PYPTE++K L T L QINNWF N R+R
Sbjct: 557 IVKRKKRGKLPGEATSILKKWLFEHNMHPYPTEEEKVALANSTFLSFNQINNWFTNARRR 616
>sp|P56661|KNOX3_MAIZE Homeobox protein knotted-1-like 3 (Fragment) OS=Zea mays GN=KNOX3
PE=2 SV=1
Length = 88
Score = 74.7 bits (182), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 59/83 (71%)
Query: 205 QELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKL 264
+ELK +L + + + ++R+E+ +KR+ KLP + L +WW+ H +WPYP+E +K L
Sbjct: 3 KELKKQLLRKYSGCLGNLRKELCKKRKKDKLPKEARQKLLSWWELHYRWPYPSEMEKIAL 62
Query: 265 VEETGLQLKQINNWFINQRKRNW 287
E TGL+ KQINNWFINQRKR+W
Sbjct: 63 AESTGLEQKQINNWFINQRKRHW 85
>sp|P56666|KNOX8_MAIZE Homeobox protein knotted-1-like 8 (Fragment) OS=Zea mays GN=KNOX8
PE=2 SV=1
Length = 85
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 56/82 (68%)
Query: 206 ELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLV 265
ELK +L + + + +R+E ++++ GKLP + L +WW+ H KWPYP+E +K L
Sbjct: 1 ELKHQLLRKYGGYLGGLRQEFSKRKKKGKLPKEARQKLLHWWELHYKWPYPSETEKMALA 60
Query: 266 EETGLQLKQINNWFINQRKRNW 287
E TGL KQINNWFINQRKR+W
Sbjct: 61 ETTGLDPKQINNWFINQRKRHW 82
>sp|A8K0S8|ME3L2_HUMAN Putative homeobox protein Meis3-like 2 OS=Homo sapiens GN=MEIS3P2
PE=2 SV=1
Length = 358
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 45/66 (68%)
Query: 220 EDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWF 279
ED+ +E R ++ G P T++++ W QH PYP+E+ K +LV++TGL + Q+NNWF
Sbjct: 237 EDLDQEPRRNKKRGIFPKVATNIMRAWLFQHLWHPYPSEEQKKQLVQDTGLTILQVNNWF 296
Query: 280 INQRKR 285
IN R+R
Sbjct: 297 INARRR 302
>sp|Q2HJ84|PKNX1_BOVIN Homeobox protein PKNOX1 OS=Bos taurus GN=PKNOX1 PE=2 SV=1
Length = 436
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 44/75 (58%)
Query: 229 KRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWH 288
K + G LP T+V+++W QH PYPTED+K ++ +T L L Q+NNWFIN R+R
Sbjct: 260 KNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRILQ 319
Query: 289 SNSQSVTSLKSKRKR 303
S S K K+
Sbjct: 320 PMLDSSCSETPKTKK 334
>sp|Q99687|MEIS3_HUMAN Homeobox protein Meis3 OS=Homo sapiens GN=MEIS3 PE=1 SV=3
Length = 375
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 44/66 (66%)
Query: 220 EDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWF 279
ED+ +E R ++ G P T++++ W QH PYP+E+ K +L ++TGL + Q+NNWF
Sbjct: 254 EDLDQERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWF 313
Query: 280 INQRKR 285
IN R+R
Sbjct: 314 INARRR 319
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.130 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 113,449,252
Number of Sequences: 539616
Number of extensions: 4862690
Number of successful extensions: 27399
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 237
Number of HSP's successfully gapped in prelim test: 83
Number of HSP's that attempted gapping in prelim test: 26756
Number of HSP's gapped (non-prelim): 593
length of query: 303
length of database: 191,569,459
effective HSP length: 117
effective length of query: 186
effective length of database: 128,434,387
effective search space: 23888795982
effective search space used: 23888795982
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (28.1 bits)