Query 022071
Match_columns 303
No_of_seqs 203 out of 1190
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 13:34:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022071.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022071hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2j0a_A Beta-1,3-N-acetylglucos 99.9 5E-26 1.7E-30 209.6 15.5 195 32-253 11-217 (280)
2 1xhb_A Polypeptide N-acetylgal 95.4 0.66 2.3E-05 44.2 16.9 160 73-239 62-244 (472)
3 2d7i_A Polypeptide N-acetylgal 94.5 1.8 6.2E-05 42.6 17.6 160 73-239 145-324 (570)
4 1qg8_A Protein (spore coat pol 93.7 2.1 7.2E-05 36.4 14.7 111 120-238 77-200 (255)
5 2ffu_A Ppgalnact-2, polypeptid 93.4 2.8 9.5E-05 40.2 16.3 156 73-239 99-276 (501)
6 4fix_A UDP-galactofuranosyl tr 91.5 6.9 0.00024 39.3 16.9 118 120-239 257-403 (657)
7 2z86_A Chondroitin synthase; G 87.9 14 0.00046 36.2 15.6 117 122-239 165-316 (625)
8 3bcv_A Putative glycosyltransf 86.5 8 0.00027 32.2 11.4 165 72-246 34-220 (240)
9 2z86_A Chondroitin synthase; G 82.6 17 0.00059 35.5 13.4 150 72-239 404-559 (625)
10 4hg6_A Cellulose synthase subu 78.1 42 0.0014 34.3 14.8 131 117-251 225-368 (802)
11 2c0n_A A197; thermophil protei 64.8 65 0.0022 27.4 10.7 134 91-236 15-159 (203)
12 2bo4_A Mannosylglycerate synth 41.0 1E+02 0.0035 28.7 8.7 170 72-244 28-210 (397)
13 1omz_A Alpha-1,4-N-acetylhexos 22.9 89 0.003 28.1 4.7 38 130-167 105-142 (293)
14 2p6w_A VP54, putative glycosyl 21.5 2.9E+02 0.0099 23.4 7.2 27 123-149 63-90 (213)
15 2lnd_A De novo designed protei 21.3 38 0.0013 24.7 1.5 71 40-128 31-104 (112)
16 1fo8_A Alpha-1,3-mannosyl-glyc 20.1 95 0.0032 28.4 4.3 85 121-215 89-178 (343)
No 1
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=99.94 E-value=5e-26 Score=209.63 Aligned_cols=195 Identities=17% Similarity=0.158 Sum_probs=132.7
Q ss_pred CceeEEEEEECCCC-CHHHHHHHHHHHhcCccccccccccCcEEEEEEeecCCCCCchhhHHHHHHHhhcCCeeeccccc
Q 022071 32 RRYLMVVGINTAFS-SRKRRDSVRATWMLQGEKRKRLEEEKGIIMRFVIGHSATSGGILDRAIEAEDRKHGDFMRLDHVE 110 (303)
Q Consensus 32 ~~~~lli~V~S~~~-~~~rR~aIR~TW~~~~~~~~~l~~~~~v~~~FvlG~~~~~~~~~~~~l~~E~~~~~Dil~~d~~D 110 (303)
..-.|+|+|+|+++ +..|+++||+||++.+. .. +||.+..+ +.. +... ..+++++.++.+
T Consensus 11 ~~~~I~~~V~T~~~~~~~R~~~I~~TW~~~~~--------~~---~fifsd~~--d~~----l~~~--~~~~~~~~~~~~ 71 (280)
T 2j0a_A 11 QLGDIFIAVKTTWAFHRSRLDLLLDTWVSRIR--------QQ---TFIFTDSP--DER----LQER--LGPHLVVTQCSA 71 (280)
T ss_dssp CGGGEEEEEECCGGGTTTTHHHHHHTGGGGSG--------GG---EEEEESSC--CHH----HHHH--HGGGEEECCC--
T ss_pred CcccEEEEEECcHHHHHHHHHHHHHHHhccCC--------Cc---eEEEcCCC--ccc----cccc--ccccceeccccc
Confidence 35678899999998 45788999999998752 11 34333332 222 3222 245788877644
Q ss_pred --cccchhHHHHHHHHHHHhcCCcceEEEecCceeecHHHHHHHHhhhCCCCCeeEEEeecCcccccCCCccccCccccc
Q 022071 111 --GYLELSAKTKIYFATAVSLWDADFYVKVDDDVHVNIATLGQTLVRHRSKPRVYIGCMKSGPVLNQKGVRYHEPEYWKF 188 (303)
Q Consensus 111 --~Y~nLt~Kt~~~~~wa~~~~~~~f~lK~DDD~fVn~~~L~~~L~~~~~~~~ly~G~~~~~pv~r~~~~Kw~~p~~~~~ 188 (303)
++.+|+.|+...+++.. +.+++|++|+|||+||++++|+++|....+.+++|+|......+++ .++++|.+..
T Consensus 72 ~~~~~~l~~K~~~~~~~~l-~~~~~Wf~~~DDDtyv~~~nL~~~L~~~d~~~~~YiG~~~~~~~~~---~~~~~~~~~~- 146 (280)
T 2j0a_A 72 EHSHPALSCKMAAEFDAFL-VSGLRWFCHVDDDNYVNPKALLQLLKTFPQDRDVYVGKPSLNRPIH---ASELQSKQRT- 146 (280)
T ss_dssp -----CCCHHHHHHHHHHH-HHTCSEEEEEETTEEECHHHHHHHHTTSCTTSCCEEECEEC-------------------
T ss_pred cccccchHHHHHHHHHHHh-CCCCcEEEEeCCCcEEcHHHHHHHHHhCCCCCCEEEEEeccCcccc---ccccCccccc-
Confidence 67889999999998754 3599999999999999999999999999888999999965432222 1344443221
Q ss_pred cCCCCCCCCCc-ccCceeecHHHHHHHHHhcccc-------CCCCCChHHHHHHHh-hCCCeEecCCCcccCCC
Q 022071 189 GEAGNRYFRHA-TGQLYAISKDLAAYISINQHVL-------HKYANEDVSLGSWFI-GLDVEHIDDRRLCCGTP 253 (303)
Q Consensus 189 ~~~~~~Yp~y~-~G~gYilS~~l~~~i~~~~~~~-------~~~~~EDV~iG~~l~-~l~v~~~~~~~f~~~~~ 253 (303)
+...| +|| +|+||+||++++++|+...... .....||+++|.|+. .+||...+.++|+...+
T Consensus 147 --~~~~~-~y~~GGaG~vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~~~~Fh~~~~ 217 (280)
T 2j0a_A 147 --KLVRF-WFATGGAGFCINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSPLFHSHLE 217 (280)
T ss_dssp ------C-CEECGGGCEEEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEECTTCCCSSS
T ss_pred --ccccc-CcccCCCEEEECHHHHHHHHHhhcccccccccccCCCCccHHHHHHHHhcCCCCceecccccCCCc
Confidence 11244 466 6789999999999999754322 122368999999998 99999999999987543
No 2
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=95.38 E-value=0.66 Score=44.16 Aligned_cols=160 Identities=13% Similarity=0.095 Sum_probs=85.4
Q ss_pred EEEEEEeecCCCCCchhhHHHHHHHhhcC-CeeeccccccccchhHHHHHHHHHHHhcCCcceEEEecCceeecHHHHHH
Q 022071 73 IIMRFVIGHSATSGGILDRAIEAEDRKHG-DFMRLDHVEGYLELSAKTKIYFATAVSLWDADFYVKVDDDVHVNIATLGQ 151 (303)
Q Consensus 73 v~~~FvlG~~~~~~~~~~~~l~~E~~~~~-Dil~~d~~D~Y~nLt~Kt~~~~~wa~~~~~~~f~lK~DDD~fVn~~~L~~ 151 (303)
..++.|-..+. ++...+.|++-.+.+. .+..+...+... ...+...+.+....+|++..|+|+.+.++.|..
T Consensus 62 ~EIIvVDd~S~--d~~t~~~l~~~~~~~~~~v~vi~~~~n~G-----~~~a~N~g~~~A~gd~i~flD~D~~~~p~~L~~ 134 (472)
T 1xhb_A 62 EEIVLVDDASE--RDFLKRPLESYVKKLKVPVHVIRMEQRSG-----LIRARLKGAAVSRGQVITFLDAHCECTAGWLEP 134 (472)
T ss_dssp EEEEEEECSCC--CGGGTHHHHHHHHSSSSCEEEEECSSCCC-----HHHHHHHHHHHCCSSEEEEEESSEEECTTCHHH
T ss_pred eEEEEEECCCC--cHHHHHHHHHHHHHCCCcEEEEECCCCCC-----hHHHHHHHHHhccCCeEEEECCCeEeCccHHHH
Confidence 45666654443 2234455555556666 455554433322 223444455555789999999999999988888
Q ss_pred HHhhhCCCCCee-EEEee--c-CcccccC-------CCccccCcccc-c---------cC-CCCCCCCCcccCceeecHH
Q 022071 152 TLVRHRSKPRVY-IGCMK--S-GPVLNQK-------GVRYHEPEYWK-F---------GE-AGNRYFRHATGQLYAISKD 209 (303)
Q Consensus 152 ~L~~~~~~~~ly-~G~~~--~-~pv~r~~-------~~Kw~~p~~~~-~---------~~-~~~~Yp~y~~G~gYilS~~ 209 (303)
++......+... .|.+. . ....... .-.|.....+. + .+ ......+++.|+.++++++
T Consensus 135 ll~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~ 214 (472)
T 1xhb_A 135 LLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRD 214 (472)
T ss_dssp HHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHH
T ss_pred HHHHHHhCCCEEEEeeeeeEcCCCceeccCCCcccceeeccceeecccCCHHHHhcccCCCCCcccCccccceeEEEEHH
Confidence 877654333333 33321 1 1100000 00111100000 0 00 0022345678999999999
Q ss_pred HHHHHHHhccccCCCCCChHHHHHHHhhCC
Q 022071 210 LAAYISINQHVLHKYANEDVSLGSWFIGLD 239 (303)
Q Consensus 210 l~~~i~~~~~~~~~~~~EDV~iG~~l~~l~ 239 (303)
+...+-.-...+..+..||+-++.=+...|
T Consensus 215 ~~~~iGgfde~~~~~g~ED~dl~~R~~~~G 244 (472)
T 1xhb_A 215 YFQEIGTYDAGMDIWGGENLEISFRIWQCG 244 (472)
T ss_dssp HHHHTTSCCTTSCTTCCCCSHHHHHHHHTT
T ss_pred HHHHcCCCCCcccccCchhHHHHHHHHhcC
Confidence 998875433344444589999877665443
No 3
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=94.45 E-value=1.8 Score=42.55 Aligned_cols=160 Identities=12% Similarity=0.029 Sum_probs=84.7
Q ss_pred EEEEEEeecCCCCCchhhHHHHHHHhhcCCeeeccccccccchhHHHHHHHHHHHhcCCcceEEEecCceeecHHHHHHH
Q 022071 73 IIMRFVIGHSATSGGILDRAIEAEDRKHGDFMRLDHVEGYLELSAKTKIYFATAVSLWDADFYVKVDDDVHVNIATLGQT 152 (303)
Q Consensus 73 v~~~FvlG~~~~~~~~~~~~l~~E~~~~~Dil~~d~~D~Y~nLt~Kt~~~~~wa~~~~~~~f~lK~DDD~fVn~~~L~~~ 152 (303)
..++.|-..+. ++.+.+.|++-.+.+..|..+...+.. .+. .+...+.+....+|++.+|+|+.+.++-|..+
T Consensus 145 ~EIIVVDDgS~--D~tl~~~l~~~~~~~~~v~vi~~~~n~-G~~----~A~N~G~~~A~gd~i~fLD~D~~~~p~~L~~l 217 (570)
T 2d7i_A 145 AEIVLVDDFSD--REHLKKPLEDYMALFPSVRILRTKKRE-GLI----RTRMLGASVATGDVITFLDSHCEANVNWLPPL 217 (570)
T ss_dssp EEEEEEECSCC--CGGGTHHHHHHHTTSTTEEEEECSSCC-CHH----HHHHHHHHHCCSSEEEECCSSEEECTTCSHHH
T ss_pred EEEEEEECCCC--cHHHHHHHHHHHHhCCeEEEEECCCCC-CHH----HHHHHHHHhcCCCEEEEEcCCccccccHHHHH
Confidence 35666654443 333355565555666666555443322 222 23344444457899999999999999877777
Q ss_pred HhhhCCCCCeeEEE-ee--cC-cc-ccc---CC----Ccccc-----C--ccccccCC-CCCCCCCcccCceeecHHHHH
Q 022071 153 LVRHRSKPRVYIGC-MK--SG-PV-LNQ---KG----VRYHE-----P--EYWKFGEA-GNRYFRHATGQLYAISKDLAA 212 (303)
Q Consensus 153 L~~~~~~~~ly~G~-~~--~~-pv-~r~---~~----~Kw~~-----p--~~~~~~~~-~~~Yp~y~~G~gYilS~~l~~ 212 (303)
+......+.+.+|. +. .+ .. .+. .. ..|.. + ....+..+ .....+++.|++.++++++..
T Consensus 218 l~~l~~~~~~vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~ 297 (570)
T 2d7i_A 218 LDRIARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRIPIPPELQKADPSDPFESPVMAGGLFAVDRKWFW 297 (570)
T ss_dssp HHHHHHCTTEEEEEEEEEECTTTCCEECCTTSSCEEEECTTCCEEEECCCTTTCCSSTTSCEECSSCCSSSEEEEHHHHH
T ss_pred HHHHHhCCCEEEeeeeeccCCCchhhccccCCcccccccccccccccccchhhhccCCCcceecccccceEEEEEHHHHH
Confidence 76553334444443 21 11 00 000 00 00110 0 00000000 011234578999999999998
Q ss_pred HHHHhccccCCCCCChHHHHHHHhhCC
Q 022071 213 YISINQHVLHKYANEDVSLGSWFIGLD 239 (303)
Q Consensus 213 ~i~~~~~~~~~~~~EDV~iG~~l~~l~ 239 (303)
.+-.-...+..+..||+-+..=+...|
T Consensus 298 ~iGgfDe~~~~~g~ED~dl~~Rl~~~G 324 (570)
T 2d7i_A 298 ELGGYDPGLEIWGGEQYEISFKVWMCG 324 (570)
T ss_dssp HTTSSCTTCCSSSSHHHHHHHHHHHTT
T ss_pred hcCCCCCcccccCcchHHHHHHHHhCC
Confidence 885433344444479999977665444
No 4
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=93.72 E-value=2.1 Score=36.41 Aligned_cols=111 Identities=8% Similarity=-0.050 Sum_probs=65.3
Q ss_pred HHHHHHHHhcCCcceEEEecCceeecHHHHHHHHhhhCC--CCCeeEEEee----c--CcccccCCCccccCccccccCC
Q 022071 120 KIYFATAVSLWDADFYVKVDDDVHVNIATLGQTLVRHRS--KPRVYIGCMK----S--GPVLNQKGVRYHEPEYWKFGEA 191 (303)
Q Consensus 120 ~~~~~wa~~~~~~~f~lK~DDD~fVn~~~L~~~L~~~~~--~~~ly~G~~~----~--~pv~r~~~~Kw~~p~~~~~~~~ 191 (303)
-..++.+.+..+.+|++.+|+|.++.++.|...+..... .-.+..|.+. . +.+. ..+..|.. .+
T Consensus 77 ~~a~N~gi~~a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----~~~~~~~~-~~--- 148 (255)
T 1qg8_A 77 AALINQAIEMAEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIV----KETVRPAA-QV--- 148 (255)
T ss_dssp HHHHHHHHHHCCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEE----EEEEECCC-SC---
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCCCcch----hhccCchH-HH---
Confidence 345566666668999999999999999888887765532 2334444431 1 1111 01111211 00
Q ss_pred CCCCCCCcccCceeecHHHHHHHH-Hhcc----ccCCCCCChHHHHHHHhhC
Q 022071 192 GNRYFRHATGQLYAISKDLAAYIS-INQH----VLHKYANEDVSLGSWFIGL 238 (303)
Q Consensus 192 ~~~Yp~y~~G~gYilS~~l~~~i~-~~~~----~~~~~~~EDV~iG~~l~~l 238 (303)
......+..|++.++.++++..+- .-.. .......||..+..-+...
T Consensus 149 ~~~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~~ 200 (255)
T 1qg8_A 149 TWNAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNHF 200 (255)
T ss_dssp BSCCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTTT
T ss_pred HHhhcCCCccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHHHHh
Confidence 012334577999999999999875 2200 1122457999987776543
No 5
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=93.38 E-value=2.8 Score=40.21 Aligned_cols=156 Identities=10% Similarity=-0.019 Sum_probs=82.0
Q ss_pred EEEEEEeecCCCCCchhhHHHHHHHhhcCCeeeccccccccchhHHHHHHHHHHHhcCCcceEEEecCceeecHHHHHHH
Q 022071 73 IIMRFVIGHSATSGGILDRAIEAEDRKHGDFMRLDHVEGYLELSAKTKIYFATAVSLWDADFYVKVDDDVHVNIATLGQT 152 (303)
Q Consensus 73 v~~~FvlG~~~~~~~~~~~~l~~E~~~~~Dil~~d~~D~Y~nLt~Kt~~~~~wa~~~~~~~f~lK~DDD~fVn~~~L~~~ 152 (303)
..+++|-..+. ++.+. ...+.+..+..+...+.. - ...+...+.+....+|++.+|+|..+.++-|..+
T Consensus 99 ~EIIvVDDgS~--D~t~~----~~~~~~~~v~vi~~~~n~---G--~~~A~N~G~~~A~gd~i~flD~D~~~~p~~L~~l 167 (501)
T 2ffu_A 99 KEIILVDDYSN--DPEDG----ALLGKIEKVRVLRNDRRE---G--LMRSRVRGADAAQAKVLTFLDSHCECNEHWLEPL 167 (501)
T ss_dssp EEEEEEECSCS--CTHHH----HGGGGBTTEEEEECSSCC---H--HHHHHHHHHHHCCSSEEEECCSSEEECTTCHHHH
T ss_pred eeEEEEECCCC--chHHH----HHHhcCCCEEEEECCCCc---C--HHHHHHHHHHhcCCCEEEEECCCcccCccHHHHH
Confidence 46666665443 22322 223445555555443322 1 2334455555558999999999999999888887
Q ss_pred HhhhCCCCCeeEEE-ee--c-Cccc--------cc-----CCCccc-cCcc-c--cccCC-CCCCCCCcccCceeecHHH
Q 022071 153 LVRHRSKPRVYIGC-MK--S-GPVL--------NQ-----KGVRYH-EPEY-W--KFGEA-GNRYFRHATGQLYAISKDL 210 (303)
Q Consensus 153 L~~~~~~~~ly~G~-~~--~-~pv~--------r~-----~~~Kw~-~p~~-~--~~~~~-~~~Yp~y~~G~gYilS~~l 210 (303)
+......+...++. +. . .... +. ...+|. .+.. . ....+ .....+++.|++.++++++
T Consensus 168 l~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~ 247 (501)
T 2ffu_A 168 LERVAEDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYMTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFY 247 (501)
T ss_dssp HHHHHHCTTEEEEEEEEEECTTTCCEECBCSSEEEEECTTCCEEEEECCHHHHHHTSSCTTSCEECSSCCSSSEEEEHHH
T ss_pred HHHHHhCCCeEEEeeeccCcCCCceeecCCcccceEeeecCCCccccCCHHHHhhccCCCCCcccCccccceEEEEEHHH
Confidence 77654333333332 21 1 0000 00 000110 0100 0 00000 1123456789999999999
Q ss_pred HHHHHHhccccCCCCCChHHHHHHHhhCC
Q 022071 211 AAYISINQHVLHKYANEDVSLGSWFIGLD 239 (303)
Q Consensus 211 ~~~i~~~~~~~~~~~~EDV~iG~~l~~l~ 239 (303)
...+-.-...+..+..||+-+..-+...|
T Consensus 248 ~~~iGgfde~~~~~g~ED~dl~~Rl~~~G 276 (501)
T 2ffu_A 248 FEELGKYDMMMDVWGGENLEISFRVWQCG 276 (501)
T ss_dssp HHHTTCCCTTCCSSSSHHHHHHHHHHHTT
T ss_pred HHHhCCCCccccccCcchHHHHHHHHhcC
Confidence 98885433344444589999977664443
No 6
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=91.52 E-value=6.9 Score=39.30 Aligned_cols=118 Identities=15% Similarity=0.106 Sum_probs=66.0
Q ss_pred HHHHHHHHhcCCcceEEEecCceeecHHHHHHHHhhhCCC-CCeeEE-Eee--cCc--------ccccCCCccc-cCccc
Q 022071 120 KIYFATAVSLWDADFYVKVDDDVHVNIATLGQTLVRHRSK-PRVYIG-CMK--SGP--------VLNQKGVRYH-EPEYW 186 (303)
Q Consensus 120 ~~~~~wa~~~~~~~f~lK~DDD~fVn~~~L~~~L~~~~~~-~~ly~G-~~~--~~p--------v~r~~~~Kw~-~p~~~ 186 (303)
-.+++.|....+++|++.+|||+.+.++.|...+...... ....+| .+. ..+ .+......|. .+...
T Consensus 257 N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 336 (657)
T 4fix_A 257 SRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAAPHAE 336 (657)
T ss_dssp HHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEEETTTTEEEECTTCC
T ss_pred HHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccEecccccccccccccc
Confidence 3456666654478999999999999998888877654322 222344 332 111 0000000010 00000
Q ss_pred c---cc-------------CCCCCCCCCcccCceeecHHHHHHHHHhccccCCCCCChHHHHHHHhhCC
Q 022071 187 K---FG-------------EAGNRYFRHATGQLYAISKDLAAYISINQHVLHKYANEDVSLGSWFIGLD 239 (303)
Q Consensus 187 ~---~~-------------~~~~~Yp~y~~G~gYilS~~l~~~i~~~~~~~~~~~~EDV~iG~~l~~l~ 239 (303)
+ |. ........|++|++.++.+++++.+---.. -.+..||+-++.=+...|
T Consensus 337 ~~~~f~~~~l~~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~vGgfd~--~F~~~ED~Dl~lR~~~~G 403 (657)
T 4fix_A 337 YDHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQPLP--LFIKWDDADYGLRAAEHG 403 (657)
T ss_dssp SCEETTTSCSSCSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHHCSCCS--CSSSSHHHHHHHHHHHTT
T ss_pred ccccccccccccccccccccccceeccccchhHhHhhHHHHHHhCCChh--HhccCcHHHHHHHHHHcC
Confidence 0 00 001223457899999999999998743221 123479999988775544
No 7
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=87.88 E-value=14 Score=36.21 Aligned_cols=117 Identities=15% Similarity=0.126 Sum_probs=63.8
Q ss_pred HHHHHHhcCCcceEEEecCceeecHHHHHHHHhhhCCCCC-eeEEEee---cCc--c---------ccc-----------
Q 022071 122 YFATAVSLWDADFYVKVDDDVHVNIATLGQTLVRHRSKPR-VYIGCMK---SGP--V---------LNQ----------- 175 (303)
Q Consensus 122 ~~~wa~~~~~~~f~lK~DDD~fVn~~~L~~~L~~~~~~~~-ly~G~~~---~~p--v---------~r~----------- 175 (303)
.++.+.+..+.+|++.+|+|..+.++.|...+......+. ..+|... ... . .+.
T Consensus 165 a~N~g~~~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (625)
T 2z86_A 165 VRNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVA 244 (625)
T ss_dssp HHHHHHHHCCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC--------
T ss_pred HHHHHHHhCCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhccCCchh
Confidence 4445555558899999999999999888887766532222 2333321 110 0 000
Q ss_pred ------CCCccccCccc---cccCCCCCCCCCcccCceeecHHHHHHHHHhccccCCCCCChHHHHHHHhhCC
Q 022071 176 ------KGVRYHEPEYW---KFGEAGNRYFRHATGQLYAISKDLAAYISINQHVLHKYANEDVSLGSWFIGLD 239 (303)
Q Consensus 176 ------~~~Kw~~p~~~---~~~~~~~~Yp~y~~G~gYilS~~l~~~i~~~~~~~~~~~~EDV~iG~~l~~l~ 239 (303)
....|...... .+. ....-..++.|++.+++++++..+---...+..+..||.-++.=+...|
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~rr~~l~~iGgfde~~~~~g~ED~dl~~Rl~~~G 316 (625)
T 2z86_A 245 GKVEQNKSVDWRIEHFKNTDNLR-LCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREG 316 (625)
T ss_dssp -------CCCTHHHHHHHTTTTT-TCSCGGGGCCTTEEEEETHHHHHHCCCCTTCSSCCCHHHHHHHHHHHTT
T ss_pred hhhccCCccccchhhhccccccc-ccCCceeEEeeceeeeEHHHHHHhCCCccccccCCcchhhhhhhHHhCC
Confidence 00011100000 000 0011123478999999999999874322333334479999988775554
No 8
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=86.53 E-value=8 Score=32.24 Aligned_cols=165 Identities=9% Similarity=-0.002 Sum_probs=80.5
Q ss_pred cEEEEEEeecCCCCCchhhHHHHHHHhhcCCeeeccccccccchhHHHHHHHHHHHhcCCcceEEEecCceeecHHHHHH
Q 022071 72 GIIMRFVIGHSATSGGILDRAIEAEDRKHGDFMRLDHVEGYLELSAKTKIYFATAVSLWDADFYVKVDDDVHVNIATLGQ 151 (303)
Q Consensus 72 ~v~~~FvlG~~~~~~~~~~~~l~~E~~~~~Dil~~d~~D~Y~nLt~Kt~~~~~wa~~~~~~~f~lK~DDD~fVn~~~L~~ 151 (303)
.+.++.|-..+. + ...+.+++-.+.+..+..+. .+ |.- .-...+.+.+..+.+|++.+|+|.++.++.|..
T Consensus 34 ~~eiIvvDd~S~--d-~t~~~~~~~~~~~~~i~~i~-~~---n~G--~~~a~N~g~~~a~g~~i~~lD~Dd~~~~~~l~~ 104 (240)
T 3bcv_A 34 DIEIILIDDESP--D-NCPKICDDYAAQYPNIKVIH-KK---NAG--LGMACNSGLDVATGEYVAFCDSDDYVDSDMYMT 104 (240)
T ss_dssp SEEEEEEECCCS--S-SHHHHHHHHHHHCSSEEEEE-CC---CCC--HHHHHHHHHHHCCSSEEEECCTTCCCCTTHHHH
T ss_pred CeEEEEEECCCC--c-CHHHHHHHHHhhCCCEEEEE-CC---CCC--hHHHHHHHHHHcCCCEEEEECCCCcCCHHHHHH
Confidence 466776665443 2 23344444455566665554 22 221 233445555556889999999999999988887
Q ss_pred HHhhhCC-CCCeeEEEee----cCc----ccccC-CCccccCccc--cccCCCCCCC-------CCcccCceeecHHHHH
Q 022071 152 TLVRHRS-KPRVYIGCMK----SGP----VLNQK-GVRYHEPEYW--KFGEAGNRYF-------RHATGQLYAISKDLAA 212 (303)
Q Consensus 152 ~L~~~~~-~~~ly~G~~~----~~p----v~r~~-~~Kw~~p~~~--~~~~~~~~Yp-------~y~~G~gYilS~~l~~ 212 (303)
.+..... ...+.+|... .+. +.... ...++..... .+...-..-+ ...+|++.++.+++++
T Consensus 105 l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~ 184 (240)
T 3bcv_A 105 MYNVAQKYTCDAVFTGLKRITMAGIPTGTVTHQKEFKLYKNKNEIHTLLKDLIASDPYAREERAIQVSAKVVLYRRNLIE 184 (240)
T ss_dssp HHHHHHHHTCSEEEC--------------------CEEECSHHHHHHHHGGGTSSCHHHHHHHHHHHTCSCEEEEHHHHH
T ss_pred HHHHHHhcCCCEEEEeeEEEccCCccccccccccccccccCHHHHHHHHHHHhhcchhhccccccccchhheeeeHHHHH
Confidence 7765532 2344433321 111 10000 0011111000 0000000000 0135788899999998
Q ss_pred HHH-HhccccCCCCCChHHHHHHHhhC--CCeEecCC
Q 022071 213 YIS-INQHVLHKYANEDVSLGSWFIGL--DVEHIDDR 246 (303)
Q Consensus 213 ~i~-~~~~~~~~~~~EDV~iG~~l~~l--~v~~~~~~ 246 (303)
.+- .-.... .+..||+.+..-+... .+..++..
T Consensus 185 ~~g~~f~~~~-~~~~eD~~~~~r~~~~g~~i~~~~~~ 220 (240)
T 3bcv_A 185 KKHLRFVSER-ILPSEDLIFNVDVLANSNIVCVLPQT 220 (240)
T ss_dssp HTTCCCCCTT-TCTTHHHHHHHHHHTTCSCEEECC--
T ss_pred HcCCccCCCC-CccCCCHHHHHHHHHhCCEEEEECCC
Confidence 753 111111 2346999998766544 45555543
No 9
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=82.58 E-value=17 Score=35.47 Aligned_cols=150 Identities=10% Similarity=0.007 Sum_probs=77.2
Q ss_pred cEEEEEEeecCCCCCchhhHHHHHHHhhcCCeeeccccccccchhHHHHHHHHHHHhcCCcceEEEecCceeecHHHHHH
Q 022071 72 GIIMRFVIGHSATSGGILDRAIEAEDRKHGDFMRLDHVEGYLELSAKTKIYFATAVSLWDADFYVKVDDDVHVNIATLGQ 151 (303)
Q Consensus 72 ~v~~~FvlG~~~~~~~~~~~~l~~E~~~~~Dil~~d~~D~Y~nLt~Kt~~~~~wa~~~~~~~f~lK~DDD~fVn~~~L~~ 151 (303)
.+.++.|-..+. +. ..+.+.+-.+.+..+..+. .+ |.- .-..++.+.+..+.+|++.+|+|.++.++.|..
T Consensus 404 ~~eiivvdd~S~--d~-t~~~~~~~~~~~~~i~~~~-~~---n~G--~~~a~n~g~~~a~g~~i~~ld~D~~~~~~~l~~ 474 (625)
T 2z86_A 404 DLEVCICDDGST--DD-TLRILQEHYANHPRVRFIS-QK---NKG--IGSASNTAVRLCRGFYIGQLDSDDFLEPDAVEL 474 (625)
T ss_dssp SEEEEEEEESCS--SS-HHHHHHHHHTTCTTEEEEE-EC---CCC--HHHHHHHHHHHCCSSEEEECCTTCEECTTHHHH
T ss_pred CeEEEEEECcCC--hh-HHHHHHHHHhhCCcEEEEe-CC---CCC--HHHHHHHHHHhcCCCEEEEECCCcccChhHHHH
Confidence 466777665554 22 3344443344555555543 22 221 223455555556889999999999999998888
Q ss_pred HHhhhC--CCCCeeEEEee----cCcccccCCCccccCccccccCCCCCCCCCcccCceeecHHHHHHHHHhccccCCCC
Q 022071 152 TLVRHR--SKPRVYIGCMK----SGPVLNQKGVRYHEPEYWKFGEAGNRYFRHATGQLYAISKDLAAYISINQHVLHKYA 225 (303)
Q Consensus 152 ~L~~~~--~~~~ly~G~~~----~~pv~r~~~~Kw~~p~~~~~~~~~~~Yp~y~~G~gYilS~~l~~~i~~~~~~~~~~~ 225 (303)
.+.... +.-.+..|... .+..+... +..+. +. .......++.|++.++.+++...+..-... ...
T Consensus 475 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---~~~~~-~~---~~~~~~~~~~~~~~~~~r~~~~~~ggfd~~--~~~ 545 (625)
T 2z86_A 475 CLDEFRKDLSLACVYTTNRNIDREGNLISNG---YNWPI-YS---REKLTSAMICHHFRMFTARAWNLTEGFNES--ISN 545 (625)
T ss_dssp HHHHHHHCTTCSEEEEEEEEECTTSCEEEEC---CCCSS-CC---HHHHTTSCCCCSCEEEEHHHHTTTTCCCSS--CSS
T ss_pred HHHHHHhCCCeeEEEeeeEEECCCCCEeccC---ccccc-CC---HHHHhhcccCCceEEEEHHHHHHhCCCCCc--cCC
Confidence 776542 22222223211 12111110 00010 00 000112345678889999876554321111 224
Q ss_pred CChHHHHHHHhhCC
Q 022071 226 NEDVSLGSWFIGLD 239 (303)
Q Consensus 226 ~EDV~iG~~l~~l~ 239 (303)
.||.-+..-+...+
T Consensus 546 ~eD~dl~~r~~~~g 559 (625)
T 2z86_A 546 AVDYDMYLKLSEVG 559 (625)
T ss_dssp CHHHHHHHHHTTTS
T ss_pred hHHHHHHHHHHHhC
Confidence 69998877665544
No 10
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=78.06 E-value=42 Score=34.30 Aligned_cols=131 Identities=13% Similarity=-0.003 Sum_probs=69.9
Q ss_pred HHHHHHHHHHHhcCCcceEEEecCceeecHHHHHHHHhhhC--CCCCeeEEEee--c-Cccccc--CCCccccCcccccc
Q 022071 117 AKTKIYFATAVSLWDADFYVKVDDDVHVNIATLGQTLVRHR--SKPRVYIGCMK--S-GPVLNQ--KGVRYHEPEYWKFG 189 (303)
Q Consensus 117 ~Kt~~~~~wa~~~~~~~f~lK~DDD~fVn~~~L~~~L~~~~--~~~~ly~G~~~--~-~pv~r~--~~~Kw~~p~~~~~~ 189 (303)
.|.- .++.+.+..+.+|++.+|+|+.+.++.|.+.+.... ++-.+..|... + .+..+. ...++.......+.
T Consensus 225 GKa~-alN~gl~~a~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (802)
T 4hg6_A 225 AKAG-NMSAALERLKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDPIQRNLALGDRCPPENEMFYG 303 (802)
T ss_dssp HHHH-HHHHHHHHCCCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSCCHHHHHHTCCTTSCCTTHHHHH
T ss_pred cchH-HHHHHHHhcCCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCCchHhhhhhHHhhhhHHHHHHHH
Confidence 3443 456666666899999999999999998888887652 22222222211 1 111000 00000000000000
Q ss_pred C--C--CCCCCCCcccCceeecHHHHHHHHHhccccCCCCCChHHHHHHHhhCC--CeEecCCCcccC
Q 022071 190 E--A--GNRYFRHATGQLYAISKDLAAYISINQHVLHKYANEDVSLGSWFIGLD--VEHIDDRRLCCG 251 (303)
Q Consensus 190 ~--~--~~~Yp~y~~G~gYilS~~l~~~i~~~~~~~~~~~~EDV~iG~~l~~l~--v~~~~~~~f~~~ 251 (303)
. . ...-.+++.|++.++.+++++.+---. .....||..++.-+...| +..+++....+.
T Consensus 304 ~~~~~~~~~~~~~~~G~~~~~Rr~al~~vGgf~---~~~~~ED~~l~~rl~~~G~ri~~~~~~~~~~~ 368 (802)
T 4hg6_A 304 KIHRGLDRWGGAFFCGSAAVLRRRALDEAGGFA---GETITEDAETALEIHSRGWKSLYIDRAMIAGL 368 (802)
T ss_dssp THHHHHHHTTCCCCCSSSEEEEHHHHHHHTTCC---CSSSSHHHHHHHHHHTTTCCEEECCCCCEEEC
T ss_pred HHHhhHhhcCCceecccchhhhHHHHHHcCCcC---CCCcchHHHHHHHHHHcCCeEEEecCCEEEec
Confidence 0 0 000113467999999999998873211 122369999999886554 445555444443
No 11
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=64.82 E-value=65 Score=27.41 Aligned_cols=134 Identities=12% Similarity=-0.020 Sum_probs=73.0
Q ss_pred HHHHHHHhhcCCeeeccccccccchhHHHHHHHHHHHhcCCcceEEEecCc---eeecHHHHHHHHhhhCCCCCeeEEEe
Q 022071 91 RAIEAEDRKHGDFMRLDHVEGYLELSAKTKIYFATAVSLWDADFYVKVDDD---VHVNIATLGQTLVRHRSKPRVYIGCM 167 (303)
Q Consensus 91 ~~l~~E~~~~~Dil~~d~~D~Y~nLt~Kt~~~~~wa~~~~~~~f~lK~DDD---~fVn~~~L~~~L~~~~~~~~ly~G~~ 167 (303)
-.|..+..+.|==+++.+.++.-+... -...=.| .+..++++++.+|-| +-.+++.+.++|... ..+.+|.-
T Consensus 15 l~l~~~l~~~gi~~~l~~~~SlI~raR-N~lv~~F-l~~~~~dhllfIDAD~~~I~FdPe~V~rLl~~g---~DVV~GsY 89 (203)
T 2c0n_A 15 LPLIDFLVKNDIEYVILSRRNHVAVQR-EIALDMF-LEMKDYDTLAFLDEDVVPIEIDFQKVEAKFNEG---YDVVCGYY 89 (203)
T ss_dssp HHHHHHHHHTTCCEEEECCCSCHHHHH-HHHHHHH-HHCTTCCEEEEECTTEEEEECCHHHHHHHHHHT---CSEEEEEC
T ss_pred hHHHHHHHhCCCeEEEEccccchHHHH-HHHHHHH-HhcCCCCEEEEEeCCCCccccCHHHHHHHHhCC---CCEEEEEe
Confidence 445566666553344444443322221 1111123 335689999999999 999999999999553 46777763
Q ss_pred --ecCcccccCCCccccCccccccCCCCCCCCCcccCceeecHHHHHHHHHhcc------ccCCCCCChHHHHHHHh
Q 022071 168 --KSGPVLNQKGVRYHEPEYWKFGEAGNRYFRHATGQLYAISKDLAAYISINQH------VLHKYANEDVSLGSWFI 236 (303)
Q Consensus 168 --~~~pv~r~~~~Kw~~p~~~~~~~~~~~Yp~y~~G~gYilS~~l~~~i~~~~~------~~~~~~~EDV~iG~~l~ 236 (303)
++..-. ....+.|.-. +. ..=-.||+.|.-++++.+++.|....- ..+..--|||++=.-+.
T Consensus 90 p~K~~~~~-s~~a~~y~~~---i~---~~~V~d~~tGF~lIkR~V~e~L~~p~fl~~~~~e~~~~~gEdv~F~~~~k 159 (203)
T 2c0n_A 90 YLKTLRGY-SVYRKDWEKE---IF---DGEVNGCGLGFTFIKREFLEKIKRPAFLAFKPIESPHWIGEDVYFFSTHK 159 (203)
T ss_dssp BCTTSSSB-SEESSSBCSS---CC---CEECSEECSSEEEEEHHHHTTSCSSCCCC---------CCHHHHHHHHHC
T ss_pred eccCCCcc-chHHHHHHHh---cc---CceeeeccccEEEEhHHHHHHHhhhhhhcCChhhhccccCCceEEEeccc
Confidence 221100 0001111111 00 111347889999999999988754321 11222358888755443
No 12
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=41.01 E-value=1e+02 Score=28.70 Aligned_cols=170 Identities=8% Similarity=-0.058 Sum_probs=83.2
Q ss_pred cEEEEEEeecCCCCCchhhHHHHHHHh-hcCC-eeeccccc-c--ccchhHHHHHHHHHHHhcCCcceEEEecCcee-ec
Q 022071 72 GIIMRFVIGHSATSGGILDRAIEAEDR-KHGD-FMRLDHVE-G--YLELSAKTKIYFATAVSLWDADFYVKVDDDVH-VN 145 (303)
Q Consensus 72 ~v~~~FvlG~~~~~~~~~~~~l~~E~~-~~~D-il~~d~~D-~--Y~nLt~Kt~~~~~wa~~~~~~~f~lK~DDD~f-Vn 145 (303)
...+++|-+-|.+...++-+.+..+.. .++. ++...... . -.-...=...+|+||.+..+.++++.+|-|.- .+
T Consensus 28 ~~EIIVVDDGStD~T~eia~~la~~~~~~~g~~vi~~~~~r~~~~n~GkG~Al~~G~~~Al~~a~gd~vv~mDADlq~~~ 107 (397)
T 2bo4_A 28 RVHEVLCIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPGKGDGMNTALRYFLEETQWERIHFYDADITSFG 107 (397)
T ss_dssp TCCEEEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSSHHHHHHHHHHHHHHHCCCSEEEECCTTCSSCC
T ss_pred CeEEEEEECcCCccHHHHHHHhhhhcccccCCeEEEEecccCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEcCCCCCCC
Confidence 356788887665311111122222332 3443 33322120 1 12344556778888874457899999999994 78
Q ss_pred HHHHHHHHhhhCCCCCeeEEEeec---CcccccCCCccccCccccccCCCCCCCCCcccCceeecHHHHHHHHHhc--cc
Q 022071 146 IATLGQTLVRHRSKPRVYIGCMKS---GPVLNQKGVRYHEPEYWKFGEAGNRYFRHATGQLYAISKDLAAYISINQ--HV 220 (303)
Q Consensus 146 ~~~L~~~L~~~~~~~~ly~G~~~~---~pv~r~~~~Kw~~p~~~~~~~~~~~Yp~y~~G~gYilS~~l~~~i~~~~--~~ 220 (303)
+.-+..++......-.+.+|.... +..+.....+..... .+..-.........++.+++++++++.+.... ..
T Consensus 108 P~~i~~Ll~~l~~g~D~V~g~~~r~~~~~~~~~~~~~~ll~~--~~~~~~~~~i~dp~sG~~a~~R~vl~~l~~~~~~~~ 185 (397)
T 2bo4_A 108 PDWITKAEEAADFGYGLVRHYFPRASTDAMITWMITRTGFAL--LWPHTELSWIEQPLGGELLMRREVAAMLYEDERVRR 185 (397)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCCTTSCHHHHHTHHHHHHH--HCTTSSGGGCSCTTCCCEEEEHHHHHHHHHCHHHHT
T ss_pred HHHHHHHHHHHHcCCCEEEEEeccccCCcHHHHHHHHHHHHH--HHHHhhccccccCCcccEEEeHHHHHHHhhhcccCc
Confidence 887777776553333555665321 111100000110000 00000001122335777899999999885421 12
Q ss_pred cCCCCCChHHHHHHH--hhCCCeEec
Q 022071 221 LHKYANEDVSLGSWF--IGLDVEHID 244 (303)
Q Consensus 221 ~~~~~~EDV~iG~~l--~~l~v~~~~ 244 (303)
...|. .|+.+-..+ .++.|..+.
T Consensus 186 ~~~fg-~eiel~~~a~~~G~rI~EVp 210 (397)
T 2bo4_A 186 RSDWG-IDTLYTFVTVQQGVSIYECY 210 (397)
T ss_dssp CCSTT-HHHHHHHHHHHTTCCEEEEE
T ss_pred CCCcc-hHHHHHHHHHHcCCEEEEEE
Confidence 23332 366665544 355554443
No 13
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A*
Probab=22.94 E-value=89 Score=28.09 Aligned_cols=38 Identities=21% Similarity=0.264 Sum_probs=30.9
Q ss_pred CCcceEEEecCceeecHHHHHHHHhhhCCCCCeeEEEe
Q 022071 130 WDADFYVKVDDDVHVNIATLGQTLVRHRSKPRVYIGCM 167 (303)
Q Consensus 130 ~~~~f~lK~DDD~fVn~~~L~~~L~~~~~~~~ly~G~~ 167 (303)
...+-|+-+|||+.++.+.|...+.-.+..+.-++|..
T Consensus 105 i~T~AVLslDDDv~l~~~el~faF~vWr~~PdRlVGf~ 142 (293)
T 1omz_A 105 VETNAVLMVDDDTLISAQDLVFAFSIWQQFPDQIIGFV 142 (293)
T ss_dssp CCSSEEEEECTTEEECHHHHHHHHHHHTTSTTSEEESC
T ss_pred CCcCEEEEEcCCCCCCHHHHHHHHHHHHHCccceecCc
Confidence 37899999999999999999888877665555567875
No 14
>2p6w_A VP54, putative glycosyltransferase (mannosyltransferase in glycosylating the PBCV-1 major...; HET: FLC; 1.60A {Paramecium bursaria chlorella virus 1} PDB: 2p72_A* 2p73_A*
Probab=21.50 E-value=2.9e+02 Score=23.41 Aligned_cols=27 Identities=22% Similarity=0.306 Sum_probs=20.6
Q ss_pred HHHH-HhcCCcceEEEecCceeecHHHH
Q 022071 123 FATA-VSLWDADFYVKVDDDVHVNIATL 149 (303)
Q Consensus 123 ~~wa-~~~~~~~f~lK~DDD~fVn~~~L 149 (303)
++-+ .++|+++||.=.|-|+++--.+.
T Consensus 63 IR~AM~khPeAEWfWWLDsDAlIMDmnf 90 (213)
T 2p6w_A 63 IQQAAEKFPSTEWFLWLDSDVYVNPKNK 90 (213)
T ss_dssp HHHHHHHCTTCSEEEEECTTEEECGGGT
T ss_pred HHHHHHHCCCceEEEEecCCceeecCCC
Confidence 4443 45899999999999999974443
No 15
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=21.30 E-value=38 Score=24.65 Aligned_cols=71 Identities=28% Similarity=0.352 Sum_probs=42.0
Q ss_pred EECCCCCHHHHHHHHHHHhcCccccccccccCcEEEEEEeecCCCCCchhhHHHHHHHhhcC---Ceeeccccccccchh
Q 022071 40 INTAFSSRKRRDSVRATWMLQGEKRKRLEEEKGIIMRFVIGHSATSGGILDRAIEAEDRKHG---DFMRLDHVEGYLELS 116 (303)
Q Consensus 40 V~S~~~~~~rR~aIR~TW~~~~~~~~~l~~~~~v~~~FvlG~~~~~~~~~~~~l~~E~~~~~---Dil~~d~~D~Y~nLt 116 (303)
|.|+.++.+.|+.|... .+ ...-.++||-|.+.+ .-.+.+.|+++-| |++-. . .-..||
T Consensus 31 irtatssqdirdiiksm--kd---------ngkplvvfvngasqn----dvnefqneakkegvsydvlks--t-dpeelt 92 (112)
T 2lnd_A 31 IRTATSSQDIRDIIKSM--KD---------NGKPLVVFVNGASQN----DVNEFQNEAKKEGVSYDVLKS--T-DPEELT 92 (112)
T ss_dssp EEEECSHHHHHHHHHHH--TT---------CCSCEEEEECSCCHH----HHHHHHHHHHHHTCEEEEEEC--C-CHHHHH
T ss_pred eeeccchhhHHHHHHHH--Hh---------cCCeEEEEecCcccc----cHHHHHHHHHhcCcchhhhcc--C-CHHHHH
Confidence 45556666777776542 11 223357899998753 2244566666655 33322 2 234689
Q ss_pred HHHHHHHHHHHh
Q 022071 117 AKTKIYFATAVS 128 (303)
Q Consensus 117 ~Kt~~~~~wa~~ 128 (303)
..+..+++.+-.
T Consensus 93 qrvreflktags 104 (112)
T 2lnd_A 93 QRVREFLKTAGS 104 (112)
T ss_dssp HHHHHHHHHTTS
T ss_pred HHHHHHHHhccc
Confidence 999999887643
No 16
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=20.08 E-value=95 Score=28.38 Aligned_cols=85 Identities=16% Similarity=0.154 Sum_probs=46.4
Q ss_pred HHHHHHHhcCCcceEEEecCceeecHHHHH---HHHhhhCCCCCeeEEEeec--CcccccCCCccccCccccccCCCCCC
Q 022071 121 IYFATAVSLWDADFYVKVDDDVHVNIATLG---QTLVRHRSKPRVYIGCMKS--GPVLNQKGVRYHEPEYWKFGEAGNRY 195 (303)
Q Consensus 121 ~~~~wa~~~~~~~f~lK~DDD~fVn~~~L~---~~L~~~~~~~~ly~G~~~~--~pv~r~~~~Kw~~p~~~~~~~~~~~Y 195 (303)
.++.++.+..+.++++.+|||..+.++=+. +.|..+...++++ |+.+ .+....... -..+...++
T Consensus 89 ~al~~vf~~~~~~~vIiLEDDl~~spdF~~y~~~~l~~y~~D~~I~--~ISa~n~~g~~~~~~-~~~~~~lyr------- 158 (343)
T 1fo8_A 89 WALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQATYPLLKADPSLW--CVSAWNDNGKEQMVD-SSKPELLYR------- 158 (343)
T ss_dssp HHHHHHHTTSCCSEEEEEETTEEECTTHHHHHHHHHHHHHHCTTEE--EEESCCTTCBGGGSC-TTCTTCEEE-------
T ss_pred HHHHHHHHhccCCEEEEEcCCCeECHHHHHHHHHHHHHhhcCCcEE--EEecccCcccccccc-ccCcceEEe-------
Confidence 455555554579999999999999996553 3333333445664 3321 111000000 001111121
Q ss_pred CCCcccCceeecHHHHHHHH
Q 022071 196 FRHATGQLYAISKDLAAYIS 215 (303)
Q Consensus 196 p~y~~G~gYilS~~l~~~i~ 215 (303)
..|..|-|+++++++-+.+-
T Consensus 159 s~~f~~wGWa~wr~~W~e~~ 178 (343)
T 1fo8_A 159 TDFFPGLGWLLLAELWAELE 178 (343)
T ss_dssp ESSCCCSSEEEEHHHHHHHG
T ss_pred ecCCCchhhhhcHHHHHHHh
Confidence 12345889999999987653
Done!