Query 022074
Match_columns 303
No_of_seqs 125 out of 1375
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 13:37:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022074.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022074hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gqb_B Methylosome protein 50; 100.0 1.2E-35 4.2E-40 264.5 29.3 228 12-284 98-332 (344)
2 2ynn_A Coatomer subunit beta'; 100.0 5.6E-35 1.9E-39 255.4 29.4 230 12-284 30-260 (304)
3 3ow8_A WD repeat-containing pr 100.0 7.5E-35 2.5E-39 256.9 29.3 264 10-282 51-320 (321)
4 1vyh_C Platelet-activating fac 100.0 5.4E-35 1.8E-39 266.1 26.3 259 12-281 125-409 (410)
5 4g56_B MGC81050 protein; prote 100.0 2.2E-34 7.6E-39 257.5 28.4 229 13-284 111-344 (357)
6 2pbi_B Guanine nucleotide-bind 100.0 4.8E-34 1.6E-38 255.0 29.1 227 12-280 123-354 (354)
7 1got_B GT-beta; complex (GTP-b 100.0 1.1E-33 3.7E-38 251.1 30.4 257 12-280 72-340 (340)
8 1vyh_C Platelet-activating fac 100.0 2.1E-33 7.1E-38 255.6 29.4 233 36-283 105-369 (410)
9 3iz6_a 40S ribosomal protein R 100.0 5.3E-34 1.8E-38 256.9 24.4 237 12-284 125-376 (380)
10 3frx_A Guanine nucleotide-bind 100.0 3.4E-33 1.2E-37 245.8 28.6 210 35-284 13-228 (319)
11 2pm7_B Protein transport prote 100.0 4.9E-33 1.7E-37 242.2 29.1 213 35-283 5-238 (297)
12 4ery_A WD repeat-containing pr 100.0 7.6E-33 2.6E-37 241.9 29.7 258 12-282 40-311 (312)
13 4gqb_B Methylosome protein 50; 100.0 4.1E-33 1.4E-37 248.2 27.9 204 37-284 80-290 (344)
14 4ggc_A P55CDC, cell division c 100.0 4.4E-32 1.5E-36 236.4 33.3 263 15-283 43-315 (318)
15 3frx_A Guanine nucleotide-bind 100.0 1.3E-32 4.6E-37 242.0 29.0 261 12-283 35-317 (319)
16 4gga_A P55CDC, cell division c 100.0 4.4E-32 1.5E-36 247.3 33.2 269 7-284 118-396 (420)
17 1got_B GT-beta; complex (GTP-b 100.0 2.4E-32 8.1E-37 242.4 29.8 208 35-284 51-258 (340)
18 3f3f_A Nucleoporin SEH1; struc 100.0 2.8E-32 9.5E-37 239.1 28.6 244 35-284 7-338 (351)
19 2ynn_A Coatomer subunit beta'; 100.0 2.5E-32 8.6E-37 238.6 28.1 206 35-284 9-218 (304)
20 2pm7_B Protein transport prote 100.0 4E-32 1.4E-36 236.5 29.3 234 12-283 26-285 (297)
21 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.4E-32 4.8E-37 244.5 26.5 206 36-281 12-223 (345)
22 2pbi_B Guanine nucleotide-bind 100.0 6.7E-32 2.3E-36 241.0 30.8 210 36-284 61-272 (354)
23 3bg1_A Protein SEC13 homolog; 100.0 1.6E-32 5.5E-37 241.2 26.2 246 34-282 8-292 (316)
24 1erj_A Transcriptional repress 100.0 2.7E-32 9.4E-37 246.7 28.3 237 12-283 140-389 (393)
25 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.6E-32 8.8E-37 242.7 27.5 245 12-284 78-336 (345)
26 2hes_X YDR267CP; beta-propelle 100.0 2.7E-32 9.3E-37 241.1 26.9 234 10-283 27-280 (330)
27 3ow8_A WD repeat-containing pr 100.0 5.6E-32 1.9E-36 238.4 28.3 242 34-284 27-280 (321)
28 2hes_X YDR267CP; beta-propelle 100.0 2E-31 6.7E-36 235.6 28.9 209 36-283 11-230 (330)
29 4h5i_A Guanine nucleotide-exch 100.0 7.8E-32 2.7E-36 241.7 26.4 218 36-294 130-354 (365)
30 4ery_A WD repeat-containing pr 100.0 6.8E-31 2.3E-35 229.5 30.5 205 35-284 19-224 (312)
31 2xzm_R RACK1; ribosome, transl 100.0 4.5E-31 1.6E-35 234.3 29.5 208 35-282 17-243 (343)
32 1nr0_A Actin interacting prote 100.0 2E-31 6.7E-36 254.5 26.3 266 11-284 75-356 (611)
33 3iz6_a 40S ribosomal protein R 100.0 1.7E-31 5.9E-36 240.4 23.4 214 35-284 62-281 (380)
34 2ymu_A WD-40 repeat protein; u 100.0 8.3E-31 2.9E-35 247.1 28.9 252 13-280 321-577 (577)
35 2xzm_R RACK1; ribosome, transl 100.0 5.9E-31 2E-35 233.5 26.2 262 12-282 44-339 (343)
36 2j04_B YDR362CP, TAU91; beta p 100.0 1.6E-31 5.4E-36 250.4 23.3 230 11-283 177-428 (524)
37 1nr0_A Actin interacting prote 100.0 1.3E-30 4.4E-35 248.8 29.5 218 18-284 40-271 (611)
38 4g56_B MGC81050 protein; prote 100.0 7.1E-31 2.4E-35 234.7 26.0 244 35-284 38-302 (357)
39 2pm9_A Protein WEB1, protein t 100.0 8.5E-31 2.9E-35 236.8 25.7 272 14-285 42-339 (416)
40 4aez_A CDC20, WD repeat-contai 100.0 2E-30 6.7E-35 234.9 27.9 264 13-287 109-384 (401)
41 1erj_A Transcriptional repress 100.0 3.2E-30 1.1E-34 233.2 27.0 200 37-283 62-287 (393)
42 4aow_A Guanine nucleotide-bind 100.0 2.7E-29 9.3E-34 220.7 31.6 120 35-159 34-159 (340)
43 3k26_A Polycomb protein EED; W 100.0 2E-30 6.9E-35 229.8 24.5 259 18-282 45-365 (366)
44 1gxr_A ESG1, transducin-like e 100.0 6E-29 2E-33 217.8 31.2 255 16-281 71-335 (337)
45 4e54_B DNA damage-binding prot 100.0 7.2E-31 2.5E-35 240.4 19.7 203 36-284 116-328 (435)
46 2ymu_A WD-40 repeat protein; u 100.0 2.1E-29 7.3E-34 237.5 29.8 235 36-283 13-252 (577)
47 3jrp_A Fusion protein of prote 100.0 2.1E-29 7.1E-34 224.3 27.6 233 12-282 28-286 (379)
48 4gq1_A NUP37; propeller, trans 100.0 2.5E-30 8.7E-35 234.0 21.7 252 9-281 103-387 (393)
49 3dwl_C Actin-related protein 2 100.0 2.3E-30 7.8E-35 231.5 21.0 244 12-282 28-280 (377)
50 3ei3_B DNA damage-binding prot 100.0 1.3E-29 4.4E-34 227.5 25.9 244 12-283 136-382 (383)
51 3vl1_A 26S proteasome regulato 100.0 3.1E-29 1.1E-33 227.2 28.3 248 13-284 74-323 (420)
52 3dm0_A Maltose-binding peripla 100.0 1.6E-29 5.4E-34 244.5 27.6 207 36-284 379-593 (694)
53 3jrp_A Fusion protein of prote 100.0 1.9E-29 6.5E-34 224.5 25.8 210 35-284 7-241 (379)
54 3mmy_A MRNA export factor; mRN 100.0 6.1E-29 2.1E-33 220.2 27.8 243 34-282 34-345 (368)
55 3zwl_B Eukaryotic translation 100.0 1.7E-28 5.8E-33 217.4 30.4 225 27-284 20-250 (369)
56 3dm0_A Maltose-binding peripla 100.0 3.6E-29 1.2E-33 242.1 27.1 229 12-284 400-633 (694)
57 3ei3_B DNA damage-binding prot 100.0 7E-29 2.4E-33 222.7 26.6 202 36-284 70-283 (383)
58 3dwl_C Actin-related protein 2 100.0 1.9E-30 6.4E-35 232.1 16.3 208 37-284 9-237 (377)
59 4e54_B DNA damage-binding prot 100.0 2.9E-29 9.9E-34 229.7 23.8 267 10-284 135-431 (435)
60 1k8k_C P40, ARP2/3 complex 41 100.0 5.1E-29 1.8E-33 221.6 24.4 244 36-283 5-274 (372)
61 2aq5_A Coronin-1A; WD40 repeat 100.0 1.7E-28 5.9E-33 221.9 28.0 230 12-284 52-300 (402)
62 3i2n_A WD repeat-containing pr 100.0 5.3E-29 1.8E-33 220.1 24.1 259 16-283 43-353 (357)
63 3sfz_A APAF-1, apoptotic pepti 100.0 1.8E-28 6.2E-33 250.6 30.5 265 12-282 632-912 (1249)
64 1yfq_A Cell cycle arrest prote 100.0 1.4E-28 4.9E-33 216.5 25.7 237 35-284 7-283 (342)
65 3vl1_A 26S proteasome regulato 100.0 3.2E-29 1.1E-33 227.1 21.9 226 12-284 114-366 (420)
66 3gre_A Serine/threonine-protei 100.0 1E-28 3.5E-33 225.4 24.5 261 12-280 81-437 (437)
67 3v7d_B Cell division control p 100.0 2.6E-28 9E-33 224.4 27.3 226 12-284 137-382 (464)
68 2xyi_A Probable histone-bindin 100.0 2.4E-28 8.1E-33 223.4 26.6 231 12-283 146-410 (430)
69 3i2n_A WD repeat-containing pr 100.0 1E-28 3.5E-33 218.3 23.3 247 35-284 14-292 (357)
70 1r5m_A SIR4-interacting protei 100.0 2.1E-28 7.2E-33 220.8 25.2 258 13-283 126-425 (425)
71 2j04_B YDR362CP, TAU91; beta p 100.0 3.3E-29 1.1E-33 234.6 20.5 261 10-283 228-517 (524)
72 4a11_B DNA excision repair pro 100.0 5.7E-28 1.9E-32 217.1 27.6 257 17-284 23-366 (408)
73 1sq9_A Antiviral protein SKI8; 100.0 1.9E-28 6.4E-33 220.3 23.7 239 12-283 86-395 (397)
74 3zwl_B Eukaryotic translation 100.0 1.7E-27 5.7E-32 211.0 29.5 263 13-283 50-346 (369)
75 1sq9_A Antiviral protein SKI8; 100.0 1.7E-28 5.7E-33 220.6 22.4 231 12-284 31-323 (397)
76 3odt_A Protein DOA1; ubiquitin 100.0 1.1E-27 3.7E-32 207.9 26.6 238 34-284 13-256 (313)
77 3odt_A Protein DOA1; ubiquitin 100.0 1.7E-27 5.9E-32 206.6 27.4 219 13-284 77-297 (313)
78 2pm9_A Protein WEB1, protein t 100.0 7.8E-29 2.7E-33 223.9 19.0 229 12-283 131-414 (416)
79 3mkq_A Coatomer beta'-subunit; 100.0 1E-27 3.5E-32 234.7 27.9 240 36-283 10-259 (814)
80 3dw8_B Serine/threonine-protei 100.0 7.9E-28 2.7E-32 219.5 24.3 216 34-283 23-315 (447)
81 1gxr_A ESG1, transducin-like e 100.0 3.2E-27 1.1E-31 206.8 26.5 240 36-284 48-297 (337)
82 3jro_A Fusion protein of prote 100.0 4.6E-28 1.6E-32 236.5 23.2 234 12-283 26-285 (753)
83 3jro_A Fusion protein of prote 100.0 8E-28 2.8E-32 234.8 24.9 214 35-284 5-239 (753)
84 3v7d_B Cell division control p 100.0 2.6E-27 8.9E-32 217.7 26.9 224 34-284 116-342 (464)
85 2w18_A PALB2, fancn, partner a 100.0 8.5E-28 2.9E-32 210.2 21.4 200 41-281 113-355 (356)
86 1k8k_C P40, ARP2/3 complex 41 100.0 2.4E-27 8.2E-32 210.8 24.4 230 12-283 69-361 (372)
87 1r5m_A SIR4-interacting protei 100.0 2.1E-26 7.1E-31 207.8 29.5 241 36-283 42-361 (425)
88 3dw8_B Serine/threonine-protei 100.0 2.8E-27 9.5E-32 215.8 24.1 263 12-281 45-444 (447)
89 1p22_A F-BOX/WD-repeat protein 100.0 1.1E-26 3.9E-31 212.3 27.2 218 12-283 148-365 (435)
90 2oaj_A Protein SNI1; WD40 repe 100.0 5.7E-27 1.9E-31 232.7 26.8 211 36-284 14-243 (902)
91 2xyi_A Probable histone-bindin 100.0 8.3E-27 2.8E-31 213.2 24.8 211 36-283 125-353 (430)
92 3k26_A Polycomb protein EED; W 100.0 4.5E-27 1.5E-31 208.2 22.1 243 35-284 14-319 (366)
93 3gre_A Serine/threonine-protei 100.0 3.9E-27 1.3E-31 214.9 21.5 207 36-284 60-293 (437)
94 1p22_A F-BOX/WD-repeat protein 100.0 9.8E-27 3.4E-31 212.7 21.3 216 12-284 188-415 (435)
95 2vdu_B TRNA (guanine-N(7)-)-me 99.9 7E-26 2.4E-30 208.1 27.0 204 37-281 100-337 (450)
96 3sfz_A APAF-1, apoptotic pepti 99.9 7.8E-26 2.7E-30 231.2 29.7 240 35-284 611-872 (1249)
97 2ovr_B FBW7, F-BOX/WD repeat p 99.9 1.7E-25 5.9E-30 204.9 28.3 64 221-284 371-443 (445)
98 1pgu_A Actin interacting prote 99.9 1E-25 3.6E-30 213.1 27.4 224 16-284 38-284 (615)
99 3vu4_A KMHSV2; beta-propeller 99.9 1.3E-25 4.3E-30 200.4 26.4 223 36-284 16-272 (355)
100 1yfq_A Cell cycle arrest prote 99.9 1.5E-26 5.3E-31 203.4 19.5 259 13-281 29-322 (342)
101 3mkq_A Coatomer beta'-subunit; 99.9 8.1E-26 2.8E-30 221.3 26.5 261 14-283 32-302 (814)
102 2ovr_B FBW7, F-BOX/WD repeat p 99.9 2.9E-25 1E-29 203.3 28.6 216 12-284 134-349 (445)
103 2j04_A TAU60, YPL007P, hypothe 99.9 1.1E-25 3.7E-30 208.7 25.3 217 18-282 65-296 (588)
104 1pgu_A Actin interacting prote 99.9 9.7E-26 3.3E-30 213.4 25.2 209 33-284 12-239 (615)
105 2aq5_A Coronin-1A; WD40 repeat 99.9 6.6E-27 2.2E-31 211.5 16.1 228 12-284 99-343 (402)
106 3lrv_A PRE-mRNA-splicing facto 99.9 6.3E-26 2.1E-30 201.0 20.0 224 10-284 51-293 (343)
107 3lrv_A PRE-mRNA-splicing facto 99.9 5E-25 1.7E-29 195.2 23.5 225 12-282 90-332 (343)
108 4aez_A CDC20, WD repeat-contai 99.9 7.8E-25 2.7E-29 198.0 24.8 201 36-284 88-294 (401)
109 4h5i_A Guanine nucleotide-exch 99.9 3.7E-25 1.3E-29 198.2 21.9 237 40-284 15-301 (365)
110 2vdu_B TRNA (guanine-N(7)-)-me 99.9 1.5E-24 5.1E-29 199.2 25.3 206 38-284 3-272 (450)
111 4gq1_A NUP37; propeller, trans 99.9 8.3E-26 2.8E-30 204.3 15.9 228 37-284 87-349 (393)
112 4aow_A Guanine nucleotide-bind 99.9 2.7E-24 9.2E-29 188.7 25.1 218 63-284 18-247 (340)
113 2oaj_A Protein SNI1; WD40 repe 99.9 4.9E-25 1.7E-29 218.9 20.1 256 12-284 452-784 (902)
114 3bg1_A Protein SEC13 homolog; 99.9 1.3E-24 4.4E-29 190.7 15.6 228 11-240 29-292 (316)
115 2j04_A TAU60, YPL007P, hypothe 99.9 1.9E-24 6.6E-29 200.3 16.2 190 37-285 13-213 (588)
116 4gga_A P55CDC, cell division c 99.9 8.2E-23 2.8E-27 185.9 26.0 197 40-284 106-311 (420)
117 3bws_A Protein LP49; two-domai 99.9 3.1E-22 1.1E-26 181.9 29.4 256 16-282 143-431 (433)
118 1l0q_A Surface layer protein; 99.9 5.2E-22 1.8E-26 178.0 30.2 258 12-284 7-276 (391)
119 3f3f_A Nucleoporin SEH1; struc 99.9 4.4E-23 1.5E-27 180.3 21.7 227 12-248 28-344 (351)
120 4a11_B DNA excision repair pro 99.9 1.5E-22 5E-27 181.7 23.4 259 12-282 117-404 (408)
121 4ggc_A P55CDC, cell division c 99.9 6.5E-22 2.2E-26 171.9 26.4 196 41-284 27-231 (318)
122 3vu4_A KMHSV2; beta-propeller 99.9 4.2E-22 1.4E-26 177.6 24.2 203 41-284 60-337 (355)
123 3bws_A Protein LP49; two-domai 99.9 5.6E-21 1.9E-25 173.6 24.5 232 41-283 124-390 (433)
124 2w18_A PALB2, fancn, partner a 99.9 4.1E-21 1.4E-25 168.0 18.8 157 37-239 176-355 (356)
125 2hqs_A Protein TOLB; TOLB, PAL 99.9 6.1E-20 2.1E-24 167.1 27.1 215 17-284 159-388 (415)
126 3mmy_A MRNA export factor; mRN 99.9 1.1E-20 3.7E-25 167.0 20.7 211 67-284 25-305 (368)
127 1l0q_A Surface layer protein; 99.9 2.9E-19 9.8E-24 160.1 24.9 185 52-284 3-190 (391)
128 2oit_A Nucleoporin 214KDA; NH2 99.8 2.4E-19 8.1E-24 164.2 20.4 202 40-284 37-279 (434)
129 1ri6_A Putative isomerase YBHE 99.8 7.5E-19 2.6E-23 153.9 21.1 263 14-282 12-307 (343)
130 2ojh_A Uncharacterized protein 99.8 6E-19 2.1E-23 150.7 19.8 227 10-284 15-259 (297)
131 2hqs_A Protein TOLB; TOLB, PAL 99.8 7.1E-19 2.4E-23 160.1 18.8 223 13-284 89-345 (415)
132 1nir_A Nitrite reductase; hemo 99.8 2.9E-17 9.8E-22 154.5 26.5 261 13-284 155-459 (543)
133 2ecf_A Dipeptidyl peptidase IV 99.8 2.6E-17 9E-22 159.7 23.1 237 40-282 37-366 (741)
134 1pby_B Quinohemoprotein amine 99.8 9.3E-17 3.2E-21 140.2 24.4 255 13-284 7-311 (337)
135 2oit_A Nucleoporin 214KDA; NH2 99.8 2.8E-17 9.7E-22 150.4 20.2 118 37-158 90-222 (434)
136 3hfq_A Uncharacterized protein 99.8 1.2E-16 4.2E-21 141.0 23.5 234 16-282 62-316 (347)
137 2ojh_A Uncharacterized protein 99.8 4.7E-17 1.6E-21 138.9 19.6 212 16-274 61-293 (297)
138 1nir_A Nitrite reductase; hemo 99.8 1.5E-16 5.1E-21 149.6 23.6 258 16-284 199-515 (543)
139 3o4h_A Acylamino-acid-releasin 99.7 4E-17 1.4E-21 154.4 18.8 195 39-284 21-228 (582)
140 3u4y_A Uncharacterized protein 99.7 4.4E-16 1.5E-20 136.1 23.6 225 14-284 17-253 (331)
141 3vgz_A Uncharacterized protein 99.7 1.7E-15 6E-20 133.2 25.4 202 38-284 39-263 (353)
142 1xfd_A DIP, dipeptidyl aminope 99.7 3.4E-17 1.2E-21 158.3 15.4 214 41-284 18-290 (723)
143 1jmx_B Amine dehydrogenase; ox 99.7 4E-16 1.4E-20 136.9 20.7 228 45-284 5-326 (349)
144 2ecf_A Dipeptidyl peptidase IV 99.7 3.5E-16 1.2E-20 151.7 20.9 233 40-283 109-413 (741)
145 3u4y_A Uncharacterized protein 99.7 1.4E-15 4.7E-20 132.9 22.4 227 18-284 63-305 (331)
146 1xfd_A DIP, dipeptidyl aminope 99.7 8.3E-16 2.8E-20 148.6 21.7 248 15-280 35-341 (723)
147 3vgz_A Uncharacterized protein 99.7 4E-15 1.4E-19 130.8 23.5 201 41-284 90-304 (353)
148 1k32_A Tricorn protease; prote 99.7 5.8E-15 2E-19 148.9 27.0 226 36-285 375-639 (1045)
149 3scy_A Hypothetical bacterial 99.7 2.4E-14 8.1E-19 127.0 27.7 270 6-283 14-337 (361)
150 3o4h_A Acylamino-acid-releasin 99.7 5.6E-16 1.9E-20 146.5 15.9 213 16-281 43-274 (582)
151 3hfq_A Uncharacterized protein 99.7 4.3E-15 1.5E-19 131.0 20.2 238 6-282 3-270 (347)
152 1k32_A Tricorn protease; prote 99.7 2.4E-15 8.1E-20 151.7 20.7 195 38-282 294-501 (1045)
153 2z3z_A Dipeptidyl aminopeptida 99.7 8.6E-15 2.9E-19 141.3 22.8 237 40-283 82-391 (706)
154 1jof_A Carboxy-CIS,CIS-muconat 99.7 4.8E-15 1.6E-19 132.2 19.0 274 5-284 2-342 (365)
155 1ri6_A Putative isomerase YBHE 99.7 1.3E-14 4.5E-19 126.7 20.9 190 54-283 8-209 (343)
156 2z3z_A Dipeptidyl aminopeptida 99.6 9.5E-15 3.3E-19 141.0 20.4 256 17-284 101-436 (706)
157 1pby_B Quinohemoprotein amine 99.6 5.2E-14 1.8E-18 122.6 21.3 221 52-284 2-270 (337)
158 1z68_A Fibroblast activation p 99.6 1.8E-15 6.3E-20 146.3 13.2 204 44-280 20-284 (719)
159 4a5s_A Dipeptidyl peptidase 4 99.6 3.5E-14 1.2E-18 138.1 16.6 112 39-159 16-141 (740)
160 1q7f_A NHL, brain tumor CG1071 99.6 5.3E-12 1.8E-16 108.1 26.6 237 36-283 26-280 (286)
161 1z68_A Fibroblast activation p 99.5 9E-14 3.1E-18 134.5 14.6 251 16-283 35-346 (719)
162 3azo_A Aminopeptidase; POP fam 99.5 7.9E-13 2.7E-17 126.6 21.1 206 36-281 20-270 (662)
163 2oiz_A Aromatic amine dehydrog 99.5 7.5E-12 2.6E-16 111.5 25.7 263 5-284 18-335 (361)
164 3fvz_A Peptidyl-glycine alpha- 99.5 2.5E-12 8.7E-17 112.9 22.3 205 37-284 88-323 (329)
165 3pe7_A Oligogalacturonate lyas 99.5 9E-13 3.1E-17 117.6 18.4 193 45-284 41-274 (388)
166 3fvz_A Peptidyl-glycine alpha- 99.5 1.3E-11 4.4E-16 108.3 25.5 208 41-283 25-277 (329)
167 3pe7_A Oligogalacturonate lyas 99.5 9.1E-12 3.1E-16 111.0 20.8 239 36-283 77-382 (388)
168 3azo_A Aminopeptidase; POP fam 99.5 1.9E-12 6.3E-17 124.0 17.1 223 18-282 48-322 (662)
169 4a5s_A Dipeptidyl peptidase 4 99.4 1.3E-12 4.6E-17 127.0 16.1 257 16-284 35-354 (740)
170 2xdw_A Prolyl endopeptidase; a 99.4 2.2E-11 7.4E-16 117.9 22.8 207 37-281 122-366 (710)
171 3scy_A Hypothetical bacterial 99.4 4.6E-11 1.6E-15 105.7 22.3 185 39-261 154-360 (361)
172 1jmx_B Amine dehydrogenase; ox 99.4 2.9E-11 1E-15 105.6 20.4 139 15-160 19-176 (349)
173 2bkl_A Prolyl endopeptidase; m 99.4 2.2E-11 7.5E-16 117.6 18.6 201 36-282 117-348 (695)
174 2dg1_A DRP35, lactonase; beta 99.3 1.3E-09 4.5E-14 95.0 27.1 202 37-283 42-263 (333)
175 2gop_A Trilobed protease; beta 99.3 1.5E-10 5.3E-15 101.4 20.9 184 40-282 59-290 (347)
176 3e5z_A Putative gluconolactona 99.3 1.9E-10 6.5E-15 98.9 20.9 194 41-283 29-246 (296)
177 3no2_A Uncharacterized protein 99.3 4.1E-10 1.4E-14 96.5 21.4 189 49-282 3-194 (276)
178 3c5m_A Oligogalacturonate lyas 99.3 4.4E-12 1.5E-16 113.0 9.1 217 38-284 34-274 (396)
179 1xip_A Nucleoporin NUP159; bet 99.3 1.3E-10 4.3E-15 104.1 17.4 171 41-269 39-230 (388)
180 1rwi_B Serine/threonine-protei 99.3 2E-09 6.8E-14 90.8 23.2 197 41-284 25-223 (270)
181 1rwi_B Serine/threonine-protei 99.3 7.7E-10 2.6E-14 93.4 20.6 199 40-284 67-265 (270)
182 3c5m_A Oligogalacturonate lyas 99.3 1.3E-10 4.5E-15 103.4 16.3 230 43-283 84-382 (396)
183 3e5z_A Putative gluconolactona 99.3 2.2E-09 7.6E-14 92.2 23.2 191 37-274 66-278 (296)
184 1jof_A Carboxy-CIS,CIS-muconat 99.2 9.2E-10 3.2E-14 97.7 20.4 188 53-282 4-223 (365)
185 1yr2_A Prolyl oligopeptidase; 99.2 7.9E-10 2.7E-14 107.5 21.0 201 37-282 160-392 (741)
186 2dg1_A DRP35, lactonase; beta 99.2 2.7E-08 9.2E-13 86.6 27.6 197 38-273 85-300 (333)
187 3no2_A Uncharacterized protein 99.2 5.7E-09 1.9E-13 89.3 22.5 205 14-271 12-231 (276)
188 2xdw_A Prolyl endopeptidase; a 99.2 2.4E-09 8.3E-14 103.5 22.6 227 17-284 151-415 (710)
189 2oiz_A Aromatic amine dehydrog 99.2 3.2E-09 1.1E-13 94.4 19.5 212 40-265 108-360 (361)
190 2gop_A Trilobed protease; beta 99.2 5.6E-09 1.9E-13 91.4 20.7 182 42-282 106-330 (347)
191 1pjx_A Dfpase, DIISOPROPYLFLUO 99.1 2.9E-08 1E-12 85.4 24.4 204 37-283 68-299 (314)
192 3dsm_A Uncharacterized protein 99.1 2.6E-08 9E-13 87.2 24.0 192 42-284 46-254 (328)
193 2bkl_A Prolyl endopeptidase; m 99.1 6.1E-09 2.1E-13 100.5 19.6 225 13-284 143-398 (695)
194 1pjx_A Dfpase, DIISOPROPYLFLUO 99.1 4.2E-08 1.4E-12 84.4 22.4 196 42-282 20-255 (314)
195 1qks_A Cytochrome CD1 nitrite 99.1 7.8E-08 2.7E-12 90.5 25.3 220 16-283 176-421 (567)
196 3dsm_A Uncharacterized protein 99.1 1.2E-08 4.2E-13 89.3 18.6 215 17-283 64-302 (328)
197 1q7f_A NHL, brain tumor CG1071 99.1 6.2E-08 2.1E-12 82.5 22.5 114 37-157 118-236 (286)
198 3iuj_A Prolyl endopeptidase; h 99.0 1.5E-08 5E-13 97.9 19.8 202 37-284 126-360 (693)
199 2z2n_A Virginiamycin B lyase; 99.0 2.6E-07 8.9E-12 78.6 25.5 196 37-281 12-211 (299)
200 3hrp_A Uncharacterized protein 99.0 2.4E-07 8.1E-12 83.8 25.7 236 41-281 132-408 (409)
201 2z2n_A Virginiamycin B lyase; 99.0 4.4E-07 1.5E-11 77.1 25.8 196 39-282 56-254 (299)
202 3g4e_A Regucalcin; six bladed 99.0 5E-07 1.7E-11 77.7 25.0 192 40-271 54-261 (297)
203 2qc5_A Streptogramin B lactona 99.0 1.2E-06 4.2E-11 74.4 27.2 234 38-282 18-259 (300)
204 2qe8_A Uncharacterized protein 99.0 1.5E-07 5.2E-12 82.8 22.0 210 36-280 63-318 (343)
205 2mad_H Methylamine dehydrogena 99.0 1.2E-06 4.3E-11 78.0 28.1 248 18-284 48-351 (373)
206 3sjl_D Methylamine dehydrogena 98.9 3.2E-07 1.1E-11 81.8 22.4 267 5-284 47-364 (386)
207 2hz6_A Endoplasmic reticulum t 98.9 1.1E-09 3.9E-14 97.6 4.4 182 50-284 8-193 (369)
208 3g4e_A Regucalcin; six bladed 98.8 1.9E-06 6.5E-11 74.0 22.8 193 43-282 16-228 (297)
209 1qks_A Cytochrome CD1 nitrite 98.8 2.1E-06 7.1E-11 80.8 23.8 201 49-284 165-374 (567)
210 1xip_A Nucleoporin NUP159; bet 98.8 1.2E-07 4.2E-12 84.7 13.8 106 37-159 86-191 (388)
211 1mda_H Methylamine dehydrogena 98.7 1.7E-06 5.7E-11 76.9 19.7 259 5-284 34-347 (368)
212 1yr2_A Prolyl oligopeptidase; 98.7 7.6E-07 2.6E-11 86.4 19.0 220 18-284 190-442 (741)
213 3dr2_A Exported gluconolactona 98.7 3.1E-06 1.1E-10 72.9 20.3 188 42-283 47-267 (305)
214 2ghs_A AGR_C_1268P; regucalcin 98.7 8.9E-06 3E-10 70.9 23.1 194 42-283 51-260 (326)
215 2qc5_A Streptogramin B lactona 98.7 3.8E-05 1.3E-09 65.0 26.0 229 39-281 61-298 (300)
216 3c75_H MADH, methylamine dehyd 98.6 1.1E-05 3.8E-10 72.9 23.0 228 49-284 82-403 (426)
217 2ghs_A AGR_C_1268P; regucalcin 98.6 2.7E-05 9.2E-10 67.8 24.8 189 40-273 90-293 (326)
218 3dr2_A Exported gluconolactona 98.6 1.8E-05 6.3E-10 68.0 22.1 186 39-274 85-298 (305)
219 2hz6_A Endoplasmic reticulum t 98.5 2.4E-08 8.1E-13 89.0 2.8 195 14-265 16-216 (369)
220 2iwa_A Glutamine cyclotransfer 98.4 6.5E-05 2.2E-09 63.4 21.0 196 42-283 23-237 (266)
221 2qe8_A Uncharacterized protein 98.4 4.4E-06 1.5E-10 73.3 13.9 225 40-281 17-276 (343)
222 3iuj_A Prolyl endopeptidase; h 98.4 2.2E-05 7.6E-10 75.6 19.3 218 16-283 154-405 (693)
223 3sjl_D Methylamine dehydrogena 98.4 2.9E-05 9.9E-10 69.2 17.9 189 45-284 38-257 (386)
224 3nok_A Glutaminyl cyclase; bet 98.3 0.0001 3.5E-09 61.9 18.1 218 1-270 21-253 (268)
225 3nol_A Glutamine cyclotransfer 98.3 0.00014 4.7E-09 61.0 18.9 183 43-271 46-243 (262)
226 1yiq_A Quinohemoprotein alcoho 98.2 9.1E-05 3.1E-09 71.3 19.2 54 218-271 482-537 (689)
227 2mad_H Methylamine dehydrogena 98.2 0.00068 2.3E-08 60.2 23.1 186 46-283 27-243 (373)
228 1kb0_A Quinohemoprotein alcoho 98.2 0.0001 3.5E-09 70.8 18.7 68 218-285 484-569 (677)
229 3c75_H MADH, methylamine dehyd 98.2 0.00039 1.3E-08 62.8 20.9 102 7-113 89-209 (426)
230 3hrp_A Uncharacterized protein 98.1 0.00021 7.2E-09 64.3 18.9 113 40-158 219-353 (409)
231 3mbr_X Glutamine cyclotransfer 98.1 0.0019 6.7E-08 53.5 21.9 183 42-270 23-222 (243)
232 2ece_A 462AA long hypothetical 98.1 0.0007 2.4E-08 61.2 20.1 192 49-282 93-351 (462)
233 3hxj_A Pyrrolo-quinoline quino 98.0 0.0015 5.1E-08 56.0 21.8 214 51-283 107-324 (330)
234 2ece_A 462AA long hypothetical 98.0 0.0032 1.1E-07 56.9 23.1 203 42-271 140-399 (462)
235 1fwx_A Nitrous oxide reductase 98.0 0.00025 8.6E-09 66.2 16.2 198 41-272 135-407 (595)
236 1fwx_A Nitrous oxide reductase 97.9 0.0012 4.1E-08 61.6 19.7 212 43-283 90-361 (595)
237 1yiq_A Quinohemoprotein alcoho 97.9 0.001 3.4E-08 64.0 19.6 53 231-284 454-506 (689)
238 1kb0_A Quinohemoprotein alcoho 97.9 0.00081 2.8E-08 64.5 18.6 52 232-284 457-508 (677)
239 2fp8_A Strictosidine synthase; 97.9 0.0026 8.8E-08 54.8 20.0 192 42-282 21-268 (322)
240 1npe_A Nidogen, entactin; glyc 97.8 0.01 3.5E-07 49.4 24.6 196 41-283 37-238 (267)
241 3q7m_A Lipoprotein YFGL, BAMB; 97.8 0.0027 9.1E-08 55.8 19.2 222 50-284 102-338 (376)
242 3q7m_A Lipoprotein YFGL, BAMB; 97.8 0.014 4.7E-07 51.1 23.4 218 50-284 52-297 (376)
243 2xe4_A Oligopeptidase B; hydro 97.7 0.00091 3.1E-08 65.0 16.2 116 37-158 170-303 (751)
244 1npe_A Nidogen, entactin; glyc 97.7 0.015 5.2E-07 48.3 21.6 178 41-265 80-263 (267)
245 1k3i_A Galactose oxidase precu 97.6 0.0059 2E-07 58.2 20.1 112 44-159 190-323 (656)
246 3qqz_A Putative uncharacterize 97.6 0.024 8.2E-07 47.3 24.0 210 36-280 23-250 (255)
247 2fp8_A Strictosidine synthase; 97.5 0.032 1.1E-06 47.8 21.5 196 41-283 81-313 (322)
248 2iwa_A Glutamine cyclotransfer 97.3 0.034 1.2E-06 46.7 17.9 156 79-284 16-182 (266)
249 3nok_A Glutaminyl cyclase; bet 97.2 0.041 1.4E-06 46.0 17.5 154 79-284 50-211 (268)
250 1kv9_A Type II quinohemoprotei 97.2 0.014 4.7E-07 55.9 16.6 52 220-271 467-520 (668)
251 3nol_A Glutamine cyclotransfer 97.2 0.027 9.3E-07 47.0 16.1 155 79-284 38-202 (262)
252 3hxj_A Pyrrolo-quinoline quino 97.1 0.0049 1.7E-07 52.7 11.6 214 46-282 26-243 (330)
253 3v65_B Low-density lipoprotein 97.0 0.17 6E-06 44.6 22.6 195 41-280 117-315 (386)
254 3mbr_X Glutamine cyclotransfer 97.0 0.091 3.1E-06 43.4 17.4 155 79-284 16-180 (243)
255 1flg_A Protein (quinoprotein e 96.9 0.03 1E-06 52.6 16.2 51 222-272 497-549 (582)
256 1w6s_A Methanol dehydrogenase 96.8 0.21 7.2E-06 47.0 21.1 52 221-272 483-536 (599)
257 1k3i_A Galactose oxidase precu 96.8 0.035 1.2E-06 52.9 15.5 70 42-112 245-322 (656)
258 1mda_H Methylamine dehydrogena 96.7 0.019 6.4E-07 50.8 12.2 91 62-159 47-158 (368)
259 2p4o_A Hypothetical protein; p 96.7 0.23 8E-06 42.0 21.9 222 41-273 33-278 (306)
260 4hw6_A Hypothetical protein, I 96.6 0.36 1.2E-05 43.4 21.0 214 41-282 183-432 (433)
261 3v64_C Agrin; beta propeller, 96.6 0.32 1.1E-05 42.2 23.9 193 42-280 75-272 (349)
262 3amr_A 3-phytase; beta-propell 96.5 0.38 1.3E-05 41.9 22.0 193 50-282 39-262 (355)
263 2ad6_A Methanol dehydrogenase 96.5 0.18 6.3E-06 47.1 17.8 52 222-273 475-528 (571)
264 1kv9_A Type II quinohemoprotei 96.3 0.08 2.7E-06 50.6 14.9 210 51-284 66-334 (668)
265 3tc9_A Hypothetical hydrolase; 96.3 0.6 2.1E-05 41.9 23.0 113 41-158 180-300 (430)
266 2ad6_A Methanol dehydrogenase 96.2 0.47 1.6E-05 44.3 19.0 54 230-284 442-495 (571)
267 1ijq_A LDL receptor, low-densi 95.9 0.67 2.3E-05 39.5 22.8 188 53-283 3-195 (316)
268 3v64_C Agrin; beta propeller, 95.9 0.74 2.5E-05 39.9 23.4 194 42-283 36-234 (349)
269 2p9w_A MAL S 1 allergenic prot 95.9 0.73 2.5E-05 39.8 18.7 202 42-280 15-262 (334)
270 2xe4_A Oligopeptidase B; hydro 95.9 0.17 5.9E-06 48.9 15.0 68 215-282 275-353 (751)
271 3tc9_A Hypothetical hydrolase; 95.8 0.55 1.9E-05 42.1 17.0 66 218-283 233-301 (430)
272 1w6s_A Methanol dehydrogenase 95.8 1.2 4E-05 41.9 19.6 27 223-249 324-350 (599)
273 3v65_B Low-density lipoprotein 95.7 1 3.5E-05 39.6 22.2 193 44-283 81-277 (386)
274 2p9w_A MAL S 1 allergenic prot 95.6 1 3.4E-05 38.9 17.9 64 218-282 144-214 (334)
275 4hw6_A Hypothetical protein, I 95.5 1.4 4.6E-05 39.6 20.9 197 42-282 141-373 (433)
276 3sov_A LRP-6, low-density lipo 95.4 1.2 3.9E-05 38.2 18.9 97 59-158 11-109 (318)
277 4a2l_A BT_4663, two-component 95.2 2.4 8.1E-05 41.0 24.3 195 40-283 357-571 (795)
278 1flg_A Protein (quinoprotein e 95.2 1.6 5.3E-05 40.9 18.3 54 230-284 464-517 (582)
279 3p5b_L Low density lipoprotein 95.0 1.8 6E-05 38.3 21.9 104 53-158 85-189 (400)
280 3m0c_C LDL receptor, low-densi 94.8 3.2 0.00011 40.4 21.7 104 53-158 397-501 (791)
281 1n7d_A LDL receptor, low-densi 94.2 0.31 1.1E-05 46.8 10.9 196 41-282 407-613 (699)
282 1n7d_A LDL receptor, low-densi 93.9 0.96 3.3E-05 43.3 13.7 177 43-263 456-636 (699)
283 3qqz_A Putative uncharacterize 93.8 2.5 8.5E-05 35.0 14.8 113 37-157 118-249 (255)
284 3v9f_A Two-component system se 93.7 5.2 0.00018 38.5 21.2 196 40-283 363-568 (781)
285 3sov_A LRP-6, low-density lipo 93.6 3 0.0001 35.5 23.0 196 41-282 36-237 (318)
286 2xzh_A Clathrin heavy chain 1; 93.2 3.9 0.00013 35.3 21.6 224 45-281 72-330 (365)
287 3kya_A Putative phosphatase; s 93.0 5.2 0.00018 36.5 22.9 219 41-284 187-476 (496)
288 4a2l_A BT_4663, two-component 93.0 6.9 0.00024 37.7 27.1 199 40-283 263-480 (795)
289 3p5b_L Low density lipoprotein 92.8 4.7 0.00016 35.5 25.8 196 41-281 113-318 (400)
290 2p4o_A Hypothetical protein; p 92.8 3.8 0.00013 34.3 21.3 64 219-283 175-242 (306)
291 3pbp_A Nucleoporin NUP82; beta 92.7 1.2 4.2E-05 39.8 11.3 111 41-155 67-208 (452)
292 1ijq_A LDL receptor, low-densi 92.5 4.4 0.00015 34.3 26.3 194 41-281 31-236 (316)
293 3m0c_C LDL receptor, low-densi 92.1 9.2 0.00032 37.1 23.2 113 41-158 425-545 (791)
294 3sre_A PON1, serum paraoxonase 91.5 6.5 0.00022 34.2 19.8 65 215-280 225-295 (355)
295 3sre_A PON1, serum paraoxonase 91.4 6.6 0.00023 34.1 17.4 49 232-283 203-252 (355)
296 2g8s_A Glucose/sorbosone dehyd 91.2 6.8 0.00023 33.8 20.4 51 221-271 288-341 (353)
297 2xbg_A YCF48-like protein; pho 90.5 7.3 0.00025 33.0 23.1 195 40-281 122-320 (327)
298 1bpo_A Protein (clathrin); cla 90.4 9.8 0.00033 34.3 20.7 225 44-281 70-329 (494)
299 3v9f_A Two-component system se 90.3 13 0.00045 35.6 25.1 111 40-159 258-392 (781)
300 3ei3_A DNA damage-binding prot 90.0 18 0.00062 36.7 20.9 109 42-158 834-954 (1158)
301 2xbg_A YCF48-like protein; pho 89.6 8.8 0.0003 32.5 14.8 112 36-152 159-272 (327)
302 4a0p_A LRP6, LRP-6, low-densit 89.6 14 0.00047 34.8 25.1 193 41-281 38-235 (628)
303 3ii7_A Kelch-like protein 7; p 88.8 9.2 0.00031 31.7 17.9 61 221-283 200-272 (306)
304 3das_A Putative oxidoreductase 87.5 13 0.00046 32.1 13.5 106 42-147 34-158 (347)
305 2vpj_A Kelch-like protein 12; 87.3 11 0.00038 31.0 18.1 61 221-283 206-278 (301)
306 2xn4_A Kelch-like protein 2; s 87.2 11 0.00039 31.0 17.7 62 221-284 204-277 (302)
307 1cru_A Protein (soluble quinop 87.1 9.7 0.00033 34.2 12.8 107 42-148 29-163 (454)
308 3a9g_A Putative uncharacterize 87.0 14 0.00048 31.8 23.0 52 220-271 275-330 (354)
309 2ism_A Putative oxidoreductase 86.6 15 0.0005 31.6 22.2 103 42-147 33-153 (352)
310 3s94_A LRP-6, low-density lipo 84.9 26 0.00087 32.9 22.9 195 42-282 42-242 (619)
311 1zgk_A Kelch-like ECH-associat 84.6 16 0.00055 30.3 14.7 61 221-283 215-287 (308)
312 1xi4_A Clathrin heavy chain; a 84.4 24 0.00081 36.8 14.8 107 45-159 71-188 (1630)
313 2vpj_A Kelch-like protein 12; 84.2 16 0.00056 30.0 16.6 62 221-284 159-232 (301)
314 3pbp_A Nucleoporin NUP82; beta 84.1 11 0.00038 33.7 11.1 69 218-287 73-162 (452)
315 2xzh_A Clathrin heavy chain 1; 82.2 22 0.00075 30.7 11.8 73 35-109 256-328 (365)
316 1tl2_A L10, protein (tachylect 81.4 11 0.00039 30.4 9.3 104 41-152 42-156 (236)
317 3kya_A Putative phosphatase; s 81.3 32 0.0011 31.3 23.1 116 41-158 140-277 (496)
318 3amr_A 3-phytase; beta-propell 80.9 27 0.00092 30.2 12.8 117 40-158 128-262 (355)
319 1bpo_A Protein (clathrin); cla 80.4 33 0.0011 30.9 12.9 74 35-110 255-328 (494)
320 1zgk_A Kelch-like ECH-associat 78.0 28 0.00097 28.8 15.4 62 221-284 168-241 (308)
321 2wg3_C Hedgehog-interacting pr 71.6 32 0.0011 31.0 10.6 108 42-149 16-159 (463)
322 3ii7_A Kelch-like protein 7; p 71.0 42 0.0014 27.5 16.7 58 51-112 12-78 (306)
323 2xn4_A Kelch-like protein 2; s 68.8 47 0.0016 27.2 17.1 61 221-283 155-229 (302)
324 2uvk_A YJHT; unknown function, 68.6 52 0.0018 27.7 11.1 40 233-274 286-327 (357)
325 4asc_A Kelch repeat and BTB do 68.1 50 0.0017 27.2 17.1 51 221-273 196-253 (315)
326 2ism_A Putative oxidoreductase 68.0 30 0.001 29.6 9.3 64 216-282 36-113 (352)
327 1tl2_A L10, protein (tachylect 66.1 5.2 0.00018 32.5 3.6 63 217-284 47-117 (236)
328 3das_A Putative oxidoreductase 65.8 56 0.0019 28.1 10.5 69 215-283 36-116 (347)
329 4asc_A Kelch repeat and BTB do 63.2 63 0.0021 26.6 16.8 61 221-283 148-221 (315)
330 2be1_A Serine/threonine-protei 61.5 17 0.00058 31.3 6.4 114 51-165 10-136 (339)
331 3s94_A LRP-6, low-density lipo 58.5 1.2E+02 0.004 28.3 24.2 112 41-157 350-465 (619)
332 3a9g_A Putative uncharacterize 58.0 36 0.0012 29.2 7.9 66 216-283 34-114 (354)
333 3sbq_A Nitrous-oxide reductase 55.6 1.1E+02 0.0038 28.5 10.8 30 131-160 325-355 (638)
334 3f7f_A Nucleoporin NUP120; nuc 55.1 34 0.0011 32.7 7.6 34 41-76 223-256 (729)
335 1cru_A Protein (soluble quinop 55.0 48 0.0016 29.6 8.5 57 215-271 31-99 (454)
336 4gq2_M Nucleoporin NUP120; bet 53.1 24 0.00081 35.0 6.6 36 41-76 237-272 (950)
337 2zwa_A Leucine carboxyl methyl 52.9 1.5E+02 0.0052 27.9 21.2 107 49-158 396-521 (695)
338 4a0p_A LRP6, LRP-6, low-densit 52.1 1.5E+02 0.0052 27.6 24.5 103 41-148 341-452 (628)
339 2g8s_A Glucose/sorbosone dehyd 51.5 1.1E+02 0.0038 25.9 15.3 54 82-139 18-76 (353)
340 3zwu_A Alkaline phosphatase PH 50.4 61 0.0021 30.2 8.5 54 217-270 482-548 (592)
341 3ei3_A DNA damage-binding prot 48.8 2.3E+02 0.0079 28.7 22.9 91 62-159 493-591 (1158)
342 4a9v_A PHOX; hydrolase, beta-p 48.5 62 0.0021 30.1 8.1 55 217-271 482-549 (592)
343 4gq2_M Nucleoporin NUP120; bet 43.1 35 0.0012 33.8 6.0 31 218-248 243-273 (950)
344 2woz_A Kelch repeat and BTB do 42.9 1.4E+02 0.0047 24.5 17.9 61 221-283 158-231 (318)
345 3sbq_A Nitrous-oxide reductase 42.8 34 0.0012 31.8 5.4 66 217-283 329-408 (638)
346 3f7f_A Nucleoporin NUP120; nuc 42.4 31 0.0011 33.0 5.2 30 221-250 230-259 (729)
347 4fhn_B Nucleoporin NUP120; pro 42.3 32 0.0011 34.8 5.7 31 219-249 246-276 (1139)
348 4fhn_B Nucleoporin NUP120; pro 38.6 26 0.0009 35.5 4.4 36 41-76 239-274 (1139)
349 2woz_A Kelch repeat and BTB do 37.9 1.7E+02 0.0057 24.0 16.1 51 221-273 206-263 (318)
350 2uvk_A YJHT; unknown function, 34.4 1.2E+02 0.0041 25.3 7.5 25 221-245 316-346 (357)
351 3b7f_A Glycosyl hydrolase, BNR 33.9 2.2E+02 0.0075 24.2 10.2 69 40-109 55-143 (394)
352 2zwa_A Leucine carboxyl methyl 31.6 3.3E+02 0.011 25.6 11.0 62 50-112 500-576 (695)
353 2wg3_C Hedgehog-interacting pr 29.0 3.1E+02 0.011 24.4 13.1 29 129-157 14-43 (463)
354 1xi4_A Clathrin heavy chain; a 26.9 2.5E+02 0.0085 29.6 9.0 72 36-109 256-327 (1630)
355 3ott_A Two-component system se 24.8 4.3E+02 0.015 24.7 19.4 106 40-158 63-173 (758)
356 2be1_A Serine/threonine-protei 22.1 2E+02 0.007 24.4 6.6 28 223-250 11-38 (339)
357 3zwu_A Alkaline phosphatase PH 20.5 3.9E+02 0.013 24.7 8.5 55 43-97 479-546 (592)
No 1
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.2e-35 Score=264.51 Aligned_cols=228 Identities=23% Similarity=0.303 Sum_probs=181.7
Q ss_pred CchhhccccccccccCcCcc--cccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEE
Q 022074 12 SGTMESLANVTEIHDGLDFS--AADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCF 89 (303)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~ 89 (303)
+|+.|..+.||++-+|.... .....||+.+|.+++|+|+|++|++|+.|++|+|||+.+++....+.+|...|.+++|
T Consensus 98 ~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~ 177 (344)
T 4gqb_B 98 VASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAA 177 (344)
T ss_dssp EEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred EEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEe
Confidence 45677889999987776443 1233699999999999999999999999999999999999988889999999999999
Q ss_pred ccCCCcEEEEecCCCeEEEEcCccccCCCccceee--cccccCeEEEEeCCC-CCEEEEEeCCCcEEEEEcccccCCccc
Q 022074 90 GDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVL--MGHLEGITFIDSRGD-GRYLISNGKDQAIKLWDIRKMSSNASC 166 (303)
Q Consensus 90 ~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~--~~h~~~v~~~~~~~~-~~~l~s~~~D~~v~lWdl~~~~~~~~~ 166 (303)
+++...+|++++.|++|++||++.. ++...+ ..|...+.+++++++ +++|++|+.|++|++||++..+
T Consensus 178 ~~~~~~~l~s~s~D~~v~iwd~~~~----~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~----- 248 (344)
T 4gqb_B 178 SPHKDSVFLSCSEDNRILLWDTRCP----KPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTS----- 248 (344)
T ss_dssp CSSCTTEEEEEETTSCEEEEETTSS----SCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC-------
T ss_pred cCCCCCceeeecccccccccccccc----ceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCc-----
Confidence 8776678999999999999998632 233333 235556889999884 5788999999999999987532
Q ss_pred ccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCC-eEEEEEeCCCeEEEEECCCCeEE
Q 022074 167 NLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQ-KYIYTGSHDSCVYVYDLVSGEQV 245 (303)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-~~latg~~dg~i~iwd~~~~~~~ 245 (303)
.+..+.+|..... ...|+|++ ++|++|+.|++|++||..+++.+
T Consensus 249 -----------------------------~~~~~~~h~~~v~------~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~ 293 (344)
T 4gqb_B 249 -----------------------------CVLSSAVHSQCVT------GLVFSPHSVPFLASLSEDCSLAVLDSSLSELF 293 (344)
T ss_dssp -----------------------------CCEEEECCSSCEE------EEEECSSSSCCEEEEETTSCEEEECTTCCEEE
T ss_pred -----------------------------EEEEEcCCCCCEE------EEEEccCCCeEEEEEeCCCeEEEEECCCCcEE
Confidence 1233444432221 23467776 68999999999999999988754
Q ss_pred EEeecCCCCeEEEEECCCCC-eEEEEeCCCCEEEeecCCC
Q 022074 246 AALKYHTSPVRDCSWHPSQP-MLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 246 ~~~~~h~~~I~~v~~sp~~~-~las~s~Dg~i~~Wd~~~~ 284 (303)
.+.+|.++|++++|||+++ +|+|+|.|++|++|+++..
T Consensus 294 -~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 294 -RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp -EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC-
T ss_pred -EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCC
Confidence 5689999999999999987 5789999999999998753
No 2
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=5.6e-35 Score=255.39 Aligned_cols=230 Identities=19% Similarity=0.272 Sum_probs=187.2
Q ss_pred CchhhccccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEcc
Q 022074 12 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGD 91 (303)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~ 91 (303)
+|+.|..+.||+.-+|.... ...+|+.+|.++.|+|++++|++|+.|++|++||+.+++....+.+|.+.|.+++|+|
T Consensus 30 s~~~dg~v~lWd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~ 107 (304)
T 2ynn_A 30 TTLYSGRVELWNYETQVEVR--SIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHP 107 (304)
T ss_dssp EEETTSEEEEEETTTTEEEE--EEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECS
T ss_pred EEcCCCcEEEEECCCCceeE--EeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcC
Confidence 46678889999886665332 3368999999999999999999999999999999999998888999999999999975
Q ss_pred CCCcEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCC-CCCEEEEEeCCCcEEEEEcccccCCcccccCc
Q 022074 92 ESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRG-DGRYLISNGKDQAIKLWDIRKMSSNASCNLGF 170 (303)
Q Consensus 92 ~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~ 170 (303)
++++|++|+.|++|++||++.. ......+.+|...|.+++|+| ++.+|++++.|++|++||++........
T Consensus 108 -~~~~l~sgs~D~~v~lWd~~~~---~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~---- 179 (304)
T 2ynn_A 108 -TKPYVLSGSDDLTVKLWNWENN---WALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTL---- 179 (304)
T ss_dssp -SSSEEEEEETTSCEEEEEGGGT---TEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEE----
T ss_pred -CCCEEEEECCCCeEEEEECCCC---cchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCcccee----
Confidence 5789999999999999997621 133456789999999999998 6789999999999999998753221100
Q ss_pred cceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEeec
Q 022074 171 RSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKY 250 (303)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~ 250 (303)
..++......+ .+. ..+++++|++|+.|++|++||+.+++.+..+.+
T Consensus 180 -----------------------------~~~~~~~v~~~--~~~--~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~ 226 (304)
T 2ynn_A 180 -----------------------------TTGQERGVNYV--DYY--PLPDKPYMITASDDLTIKIWDYQTKSCVATLEG 226 (304)
T ss_dssp -----------------------------ECCCTTCEEEE--EEC--CSTTCCEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred -----------------------------ccCCcCcEEEE--EEE--EcCCCCEEEEEcCCCeEEEEeCCCCccceeeCC
Confidence 00110001111 111 124778999999999999999999999999999
Q ss_pred CCCCeEEEEECCCCCeEEEEeCCCCEEEeecCCC
Q 022074 251 HTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 251 h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~~ 284 (303)
|..+|.+++|+|++++|+|++.||+|++||....
T Consensus 227 h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~ 260 (304)
T 2ynn_A 227 HMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTY 260 (304)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC
T ss_pred CCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 9999999999999999999999999999998643
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.5e-35 Score=256.86 Aligned_cols=264 Identities=20% Similarity=0.233 Sum_probs=203.4
Q ss_pred ccCchhhccccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEE
Q 022074 10 VGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCF 89 (303)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~ 89 (303)
+=+|+.|..+.||+.-++.........||..+|.+++|++++..+++++.|++|+|||+.+++....+..|...+.+++|
T Consensus 51 l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~ 130 (321)
T 3ow8_A 51 VVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAF 130 (321)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEE
T ss_pred EEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEE
Confidence 34678889999998754432112234799999999999999999999999999999999999988888888889999999
Q ss_pred ccCCCcEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccC
Q 022074 90 GDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLG 169 (303)
Q Consensus 90 ~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~ 169 (303)
+| ++++|++++.|+.|++||++. ......+..|...+.+++++|++++|++++.|+.|++||++........
T Consensus 131 sp-dg~~l~~g~~dg~v~i~~~~~----~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~--- 202 (321)
T 3ow8_A 131 SP-DSQYLATGTHVGKVNIFGVES----GKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTL--- 202 (321)
T ss_dssp CT-TSSEEEEECTTSEEEEEETTT----CSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE---
T ss_pred CC-CCCEEEEEcCCCcEEEEEcCC----CceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEE---
Confidence 75 588999999999999999862 3345566778889999999999999999999999999999764332211
Q ss_pred ccceeeeceeeeCCCCCccccCCC-CCcceEEecccc-eeeeEEE----eeeeeeeCCCeEEEEEeCCCeEEEEECCCCe
Q 022074 170 FRSYEWDYRWMDYPPQARDLKHPC-DQSVATYKGHSV-LRTLIRC----HFSPVYSTGQKYIYTGSHDSCVYVYDLVSGE 243 (303)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~----~~~~~~s~~~~~latg~~dg~i~iwd~~~~~ 243 (303)
......+..+.+.|+...+.... +..+..++-... ....+.. .....|+|++++|++|+.|++|++||+.+++
T Consensus 203 -~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~ 281 (321)
T 3ow8_A 203 -EGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRT 281 (321)
T ss_dssp -CCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred -cccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCE
Confidence 11112233345555554443322 333443332211 0011111 1234588999999999999999999999999
Q ss_pred EEEEeecCCCCeEEEEECCCCCeEEEEeCCCCEEEeecC
Q 022074 244 QVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFP 282 (303)
Q Consensus 244 ~~~~~~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~ 282 (303)
.+..+.+|..+|++++|+|++++|++++.|++|++||.+
T Consensus 282 ~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 282 CVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred EEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 999999999999999999999999999999999999964
No 4
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=5.4e-35 Score=266.12 Aligned_cols=259 Identities=20% Similarity=0.321 Sum_probs=196.7
Q ss_pred CchhhccccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEcc
Q 022074 12 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGD 91 (303)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~ 91 (303)
+|+.|..+.||+.-+|... ....||..+|.+++|+|+|++|++|+.|++|+|||+.+++....+.+|...|.+++|+|
T Consensus 125 s~s~Dg~i~vwd~~~~~~~--~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p 202 (410)
T 1vyh_C 125 SASEDATIKVWDYETGDFE--RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMP 202 (410)
T ss_dssp EEESSSCEEEEETTTCCCC--EEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECS
T ss_pred EEeCCCeEEEEECCCCcEE--EEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeC
Confidence 5677889999998776533 24479999999999999999999999999999999999888888889999999999975
Q ss_pred CCCcEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCcc
Q 022074 92 ESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFR 171 (303)
Q Consensus 92 ~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~ 171 (303)
+++.|++|+.|++|++||++ .+.....+.+|...|..+.+++++.+|++++.|++|++||++.........
T Consensus 203 -~~~~l~s~s~D~~i~~wd~~----~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~---- 273 (410)
T 1vyh_C 203 -NGDHIVSASRDKTIKMWEVQ----TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR---- 273 (410)
T ss_dssp -SSSEEEEEETTSEEEEEETT----TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC----
T ss_pred -CCCEEEEEeCCCeEEEEECC----CCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEec----
Confidence 57899999999999999986 344566788999999999999999999999999999999997643221111
Q ss_pred ceeeeceeeeCCCCC--------------------ccccC-CCCCcceEEecccce-eeeEEE----eeeeeeeCCCeEE
Q 022074 172 SYEWDYRWMDYPPQA--------------------RDLKH-PCDQSVATYKGHSVL-RTLIRC----HFSPVYSTGQKYI 225 (303)
Q Consensus 172 ~~~~~~~~~~~~~~~--------------------~~~~~-~~~~~~~~~~~~~~~-~~~~~~----~~~~~~s~~~~~l 225 (303)
.....+..+.+.|.. ..+.. ..+..+..++-.... ...+.. .....|+|++++|
T Consensus 274 ~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l 353 (410)
T 1vyh_C 274 EHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFI 353 (410)
T ss_dssp CCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCE
T ss_pred CCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEE
Confidence 011111112222211 11111 112222222211100 000111 1234578899999
Q ss_pred EEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEECCCCCeEEEEeCCCCEEEeec
Q 022074 226 YTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEF 281 (303)
Q Consensus 226 atg~~dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~ 281 (303)
++|+.||.|++||+.+++.+..+.+|..+|++++|+|++++|+||+.|++|++|+.
T Consensus 354 ~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 354 LSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp EEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred EEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999985
No 5
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.2e-34 Score=257.46 Aligned_cols=229 Identities=21% Similarity=0.225 Sum_probs=175.5
Q ss_pred chhhccccccccccCcCcc--cccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEc
Q 022074 13 GTMESLANVTEIHDGLDFS--AADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFG 90 (303)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~ 90 (303)
++.|..+.||++-+|.... .....||+.+|.+++|+|+|++|++|+.|++|+|||+.+++....+..|...|.+++|+
T Consensus 111 ~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s 190 (357)
T 4g56_B 111 ASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAAC 190 (357)
T ss_dssp EETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred EECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEc
Confidence 3457788999987776432 22336999999999999999999999999999999999999888899999999999998
Q ss_pred cCCCcEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCCC-CCEEEEEeCCCcEEEEEcccccCCcccccC
Q 022074 91 DESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGD-GRYLISNGKDQAIKLWDIRKMSSNASCNLG 169 (303)
Q Consensus 91 ~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~ 169 (303)
++...++++++.|++|++||++..... ....+..|...+.+++|+|+ +.+|++|+.|+.|++||++....
T Consensus 191 ~~~~~~~~s~~~dg~v~~wd~~~~~~~--~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~------- 261 (357)
T 4g56_B 191 PGKDTIFLSCGEDGRILLWDTRKPKPA--TRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDS------- 261 (357)
T ss_dssp TTCSSCEEEEETTSCEEECCTTSSSCB--CBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGG-------
T ss_pred cCCCceeeeeccCCceEEEECCCCcee--eeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcE-------
Confidence 766678999999999999998633211 11123356677999999987 56889999999999999875321
Q ss_pred ccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCC-eEEEEEeCCCeEEEEECCCCeEEEEe
Q 022074 170 FRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQ-KYIYTGSHDSCVYVYDLVSGEQVAAL 248 (303)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-~~latg~~dg~i~iwd~~~~~~~~~~ 248 (303)
+..+.++..... ...|+|++ ++||+|+.|++|+|||+++++.+..+
T Consensus 262 ---------------------------~~~~~~~~~~v~------~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~ 308 (357)
T 4g56_B 262 ---------------------------AQTSAVHSQNIT------GLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL 308 (357)
T ss_dssp ---------------------------CEEECCCSSCEE------EEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC
T ss_pred ---------------------------eEEEeccceeEE------EEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC
Confidence 112222221111 22366665 68999999999999999999877655
Q ss_pred ecCCCCeEEEEECC-CCCeEEEEeCCCCEEEeecCCC
Q 022074 249 KYHTSPVRDCSWHP-SQPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 249 ~~h~~~I~~v~~sp-~~~~las~s~Dg~i~~Wd~~~~ 284 (303)
+|.++|++++||| ++++|+|+|.||+|++|+++..
T Consensus 309 -~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 309 -SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp -CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred -CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 7999999999999 7899999999999999999754
No 6
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=4.8e-34 Score=254.97 Aligned_cols=227 Identities=21% Similarity=0.330 Sum_probs=185.1
Q ss_pred CchhhccccccccccCcCcc----cccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEE
Q 022074 12 SGTMESLANVTEIHDGLDFS----AADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTV 87 (303)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l 87 (303)
+|+.|..+.||+.-.+.... .....+|...|.+++|+|+++.+++++.|++|++||+.+++....+.+|...|.++
T Consensus 123 sg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~ 202 (354)
T 2pbi_B 123 CGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCL 202 (354)
T ss_dssp EESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred EeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEE
Confidence 35567777777764432111 11225899999999999999999999999999999999999888899999999999
Q ss_pred EEccC-CCcEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCccc
Q 022074 88 CFGDE-SGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASC 166 (303)
Q Consensus 88 ~~~~~-~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~ 166 (303)
.+++. +++.|++|+.||+|++||++ .+.....+.+|...|.+++++|++++|++++.|++|++||++......
T Consensus 203 ~~~~~~~g~~l~sgs~Dg~v~~wd~~----~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~-- 276 (354)
T 2pbi_B 203 DLAPSETGNTFVSGGCDKKAMVWDMR----SGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVA-- 276 (354)
T ss_dssp EECCCSSCCEEEEEETTSCEEEEETT----TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE--
T ss_pred EEEeCCCCCEEEEEeCCCeEEEEECC----CCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEE--
Confidence 99764 46899999999999999986 344566788999999999999999999999999999999997532110
Q ss_pred ccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEE
Q 022074 167 NLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVA 246 (303)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~ 246 (303)
.+..+.... ......|+|++++|++|+.|+.|++||+.+++.+.
T Consensus 277 --------------------------------~~~~~~~~~----~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~ 320 (354)
T 2pbi_B 277 --------------------------------IYSKESIIF----GASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVS 320 (354)
T ss_dssp --------------------------------EECCTTCCS----CEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEE
T ss_pred --------------------------------EEcCCCccc----ceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEE
Confidence 000000000 00123478899999999999999999999999999
Q ss_pred EeecCCCCeEEEEECCCCCeEEEEeCCCCEEEee
Q 022074 247 ALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWE 280 (303)
Q Consensus 247 ~~~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd 280 (303)
.+.+|..+|++++|||++++|+|++.|+++++|+
T Consensus 321 ~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 321 ILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 9999999999999999999999999999999996
No 7
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.1e-33 Score=251.06 Aligned_cols=257 Identities=18% Similarity=0.283 Sum_probs=197.5
Q ss_pred CchhhccccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCc----eEEEEecccCCeEEE
Q 022074 12 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANK----LSLRILAHTSDVNTV 87 (303)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~----~~~~~~~h~~~v~~l 87 (303)
+|+.|..+.||+..+|.... ...+|...|.+++|+|+|+++++|+.|+.|++|++.++. ....+.+|.+.|.++
T Consensus 72 s~s~Dg~v~iWd~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~ 149 (340)
T 1got_B 72 SASQDGKLIIWDSYTTNKVH--AIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCC 149 (340)
T ss_dssp EEETTTEEEEEETTTCCEEE--EEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEE
T ss_pred EEeCCCcEEEEECCCCCcce--EeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEE
Confidence 56778889999987776442 235789999999999999999999999999999998753 445677899999999
Q ss_pred EEccCCCcEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccc
Q 022074 88 CFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCN 167 (303)
Q Consensus 88 ~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~ 167 (303)
.|.++ ..+++++.|++|++||++ .+.....+.+|...|.+++++|+++++++++.|++|++||++........
T Consensus 150 ~~~~~--~~l~s~s~d~~i~~wd~~----~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~- 222 (340)
T 1got_B 150 RFLDD--NQIVTSSGDTTCALWDIE----TGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTF- 222 (340)
T ss_dssp EEEET--TEEEEEETTSCEEEEETT----TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEE-
T ss_pred EECCC--CcEEEEECCCcEEEEECC----CCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEE-
Confidence 99753 358899999999999986 34456678899999999999999999999999999999999864322211
Q ss_pred cCccceeeeceeeeCCCCCccccCCC-CCcceEEecccceee-eE------EEeeeeeeeCCCeEEEEEeCCCeEEEEEC
Q 022074 168 LGFRSYEWDYRWMDYPPQARDLKHPC-DQSVATYKGHSVLRT-LI------RCHFSPVYSTGQKYIYTGSHDSCVYVYDL 239 (303)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~------~~~~~~~~s~~~~~latg~~dg~i~iwd~ 239 (303)
......+..+.+.|....+.... +..+..++-...... .. ....+..|+|++++|++|+.|+.|++||.
T Consensus 223 ---~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~ 299 (340)
T 1got_B 223 ---TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDA 299 (340)
T ss_dssp ---CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred ---cCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEc
Confidence 11112223344555544443322 333444432211000 00 01223458899999999999999999999
Q ss_pred CCCeEEEEeecCCCCeEEEEECCCCCeEEEEeCCCCEEEee
Q 022074 240 VSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWE 280 (303)
Q Consensus 240 ~~~~~~~~~~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd 280 (303)
.+++.+..+.+|..+|++++|+|++++|+||+.|++|++||
T Consensus 300 ~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 300 LKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp TTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred ccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 99999999999999999999999999999999999999997
No 8
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.1e-33 Score=255.64 Aligned_cols=233 Identities=21% Similarity=0.325 Sum_probs=182.4
Q ss_pred CCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCcccc
Q 022074 36 GGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLN 115 (303)
Q Consensus 36 ~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~ 115 (303)
.||..+|.+++|+|+++.+++|+.||+|+|||+.+++....+.+|.+.|.+++|++ ++++|++|+.|++|++||+.
T Consensus 105 ~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~-~~~~l~sgs~D~~i~iwd~~--- 180 (410)
T 1vyh_C 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH-SGKLLASCSADMTIKLWDFQ--- 180 (410)
T ss_dssp ECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECT-TSSEEEEEETTSCCCEEETT---
T ss_pred cccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcC-CCCEEEEEeCCCeEEEEeCC---
Confidence 58999999999999999999999999999999999988888999999999999975 57899999999999999975
Q ss_pred CCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCC-CC
Q 022074 116 VKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHP-CD 194 (303)
Q Consensus 116 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 194 (303)
.......+.+|...|.+++++|++++|++++.|++|++||++......... .....+..+.+.+....+... .+
T Consensus 181 -~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~----~h~~~v~~~~~~~~g~~l~s~s~D 255 (410)
T 1vyh_C 181 -GFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT----GHREWVRMVRPNQDGTLIASCSND 255 (410)
T ss_dssp -SSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE----CCSSCEEEEEECTTSSEEEEEETT
T ss_pred -CCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEe----CCCccEEEEEECCCCCEEEEEcCC
Confidence 234566778999999999999999999999999999999997643221111 111111222333333333221 12
Q ss_pred CcceE-----------EecccceeeeEEEeeeeeeeCC--------------------CeEEEEEeCCCeEEEEECCCCe
Q 022074 195 QSVAT-----------YKGHSVLRTLIRCHFSPVYSTG--------------------QKYIYTGSHDSCVYVYDLVSGE 243 (303)
Q Consensus 195 ~~~~~-----------~~~~~~~~~~~~~~~~~~~s~~--------------------~~~latg~~dg~i~iwd~~~~~ 243 (303)
..+.. +.+|...... ..|+|+ +.+|++|+.|+.|++||+.+++
T Consensus 256 ~~v~vwd~~~~~~~~~~~~h~~~v~~------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~ 329 (410)
T 1vyh_C 256 QTVRVWVVATKECKAELREHRHVVEC------ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM 329 (410)
T ss_dssp SCEEEEETTTCCEEEEECCCSSCEEE------EEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTE
T ss_pred CeEEEEECCCCceeeEecCCCceEEE------EEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCc
Confidence 22222 2233222111 123332 6789999999999999999999
Q ss_pred EEEEeecCCCCeEEEEECCCCCeEEEEeCCCCEEEeecCC
Q 022074 244 QVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPG 283 (303)
Q Consensus 244 ~~~~~~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~ 283 (303)
.+..+.+|..+|++++|+|++++|+|++.|++|++||+..
T Consensus 330 ~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~ 369 (410)
T 1vyh_C 330 CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369 (410)
T ss_dssp EEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTT
T ss_pred eEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 9999999999999999999999999999999999999864
No 9
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=5.3e-34 Score=256.86 Aligned_cols=237 Identities=22% Similarity=0.352 Sum_probs=187.3
Q ss_pred CchhhccccccccccCcC-----cccccCCCcccceEEEEEcCCC-CEEEEeeCCCeEEEEECCCCceEEEE-----ecc
Q 022074 12 SGTMESLANVTEIHDGLD-----FSAADDGGYSFGIFSLKFSTDG-RELVAGSSDDCIYVYDLEANKLSLRI-----LAH 80 (303)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~v~~l~~s~~g-~~l~sgs~Dg~v~lwd~~~~~~~~~~-----~~h 80 (303)
+|+.|..+.||++-++.. .......||+..|.++.|+|++ ..|++|+.|++|++||+.+++....+ .+|
T Consensus 125 s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h 204 (380)
T 3iz6_a 125 CGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGH 204 (380)
T ss_dssp ECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSC
T ss_pred EeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCC
Confidence 466778888888754321 1123347999999999999974 57999999999999999999877655 578
Q ss_pred cCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccc
Q 022074 81 TSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKM 160 (303)
Q Consensus 81 ~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~ 160 (303)
...|.+++|++.++++|++|+.|++|++||++. .......+.+|...|.+++|+|++++|++++.|++|++||++..
T Consensus 205 ~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~---~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~ 281 (380)
T 3iz6_a 205 TADVLSLSINSLNANMFISGSCDTTVRLWDLRI---TSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTG 281 (380)
T ss_dssp CSCEEEEEECSSSCCEEEEEETTSCEEEEETTT---TCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTT
T ss_pred ccCeEEEEeecCCCCEEEEEECCCeEEEEECCC---CCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCC
Confidence 899999999876789999999999999999862 23456678899999999999999999999999999999999753
Q ss_pred cCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECC
Q 022074 161 SSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLV 240 (303)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~ 240 (303)
........ .+... . .+ ........|+|++++|++|+.||.|++||..
T Consensus 282 ~~~~~~~~--------------~~~~~------~-------~~------~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~ 328 (380)
T 3iz6_a 282 HQLQVYNR--------------EPDRN------D-------NE------LPIVTSVAFSISGRLLFAGYSNGDCYVWDTL 328 (380)
T ss_dssp EEEEEECC--------------CCSSS------C-------CS------SCSCSEEEECSSSSEEEEECTTSCEEEEETT
T ss_pred cEEEEecc--------------ccccc------c-------cc------cCceEEEEECCCCCEEEEEECCCCEEEEECC
Confidence 22111000 00000 0 00 0001233578899999999999999999999
Q ss_pred CCeEEEEe----ecCCCCeEEEEECCCCCeEEEEeCCCCEEEeecCCC
Q 022074 241 SGEQVAAL----KYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 241 ~~~~~~~~----~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~~ 284 (303)
+++.+..+ .+|..+|++++|||++++|+||+.|++|++|++.+.
T Consensus 329 ~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 329 LAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp TCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSS
T ss_pred CCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCC
Confidence 98887776 689999999999999999999999999999998754
No 10
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3.4e-33 Score=245.82 Aligned_cols=210 Identities=21% Similarity=0.310 Sum_probs=168.4
Q ss_pred CCCcccceEEEEEcCCC-CEEEEeeCCCeEEEEECCCC-----ceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEE
Q 022074 35 DGGYSFGIFSLKFSTDG-RELVAGSSDDCIYVYDLEAN-----KLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKV 108 (303)
Q Consensus 35 ~~~~~~~v~~l~~s~~g-~~l~sgs~Dg~v~lwd~~~~-----~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~l 108 (303)
..||+.+|.+++|+|++ +.|++|+.|++|++||+.+. .....+.+|...|.+++|++ ++++|++|+.|++|++
T Consensus 13 l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~-dg~~l~s~s~D~~v~~ 91 (319)
T 3frx_A 13 LEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTA-DGAYALSASWDKTLRL 91 (319)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECT-TSSEEEEEETTSEEEE
T ss_pred EccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECC-CCCEEEEEeCCCEEEE
Confidence 36999999999999965 79999999999999998643 23456789999999999975 5889999999999999
Q ss_pred EcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCcc
Q 022074 109 WDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARD 188 (303)
Q Consensus 109 Wd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (303)
||++ +++....+.+|...|.++++++++.+|++++.|++|++||++...
T Consensus 92 wd~~----~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~--------------------------- 140 (319)
T 3frx_A 92 WDVA----TGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQC--------------------------- 140 (319)
T ss_dssp EETT----TTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCE---------------------------
T ss_pred EECC----CCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe---------------------------
Confidence 9986 345567788999999999999999999999999999999985311
Q ss_pred ccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEECCCCCeEE
Q 022074 189 LKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLV 268 (303)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~~la 268 (303)
+..+.+|......+..........++.++++++.|+.|++||+.+++....+.+|..+|++++|+|++++|+
T Consensus 141 --------~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~ 212 (319)
T 3frx_A 141 --------LATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIA 212 (319)
T ss_dssp --------EEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEE
T ss_pred --------EEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEE
Confidence 111222221111111111111223566899999999999999999998889999999999999999999999
Q ss_pred EEeCCCCEEEeecCCC
Q 022074 269 SSSWDGDVVRWEFPGN 284 (303)
Q Consensus 269 s~s~Dg~i~~Wd~~~~ 284 (303)
+++.||+|++||+...
T Consensus 213 s~~~dg~i~iwd~~~~ 228 (319)
T 3frx_A 213 SAGKDGEIMLWNLAAK 228 (319)
T ss_dssp EEETTCEEEEEETTTT
T ss_pred EEeCCCeEEEEECCCC
Confidence 9999999999998653
No 11
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=4.9e-33 Score=242.24 Aligned_cols=213 Identities=19% Similarity=0.284 Sum_probs=165.6
Q ss_pred CCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCC--ceEEEEecccCCeEEEEEccC-CCcEEEEecCCCeEEEEcC
Q 022074 35 DGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN--KLSLRILAHTSDVNTVCFGDE-SGHLIYSGSDDNLCKVWDR 111 (303)
Q Consensus 35 ~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~--~~~~~~~~h~~~v~~l~~~~~-~~~~l~s~s~dg~v~lWd~ 111 (303)
..||+.+|.+++|+|+|++|++|+.|++|+|||+.++ +....+.+|.+.|.+++|+++ .+++|+||+.|++|++||+
T Consensus 5 ~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~ 84 (297)
T 2pm7_B 5 ANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKE 84 (297)
T ss_dssp CCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEB
T ss_pred ccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEc
Confidence 4689999999999999999999999999999999753 456678899999999999754 4789999999999999998
Q ss_pred ccccCCCccceeecccccCeEEEEeCCC--CCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccc
Q 022074 112 RCLNVKGKPAGVLMGHLEGITFIDSRGD--GRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDL 189 (303)
Q Consensus 112 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (303)
+.. .......+.+|...|.+++|+|+ +.+|++++.|++|++||++......
T Consensus 85 ~~~--~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~------------------------- 137 (297)
T 2pm7_B 85 ENG--RWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTS------------------------- 137 (297)
T ss_dssp SSS--CBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBC-------------------------
T ss_pred CCC--ceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCcee-------------------------
Confidence 632 11234567789999999999997 8899999999999999987431100
Q ss_pred cCCCCCcceEEecccceeeeEEEeeeee---------eeCCCeEEEEEeCCCeEEEEECCCCe----EEEEeecCCCCeE
Q 022074 190 KHPCDQSVATYKGHSVLRTLIRCHFSPV---------YSTGQKYIYTGSHDSCVYVYDLVSGE----QVAALKYHTSPVR 256 (303)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~s~~~~~latg~~dg~i~iwd~~~~~----~~~~~~~h~~~I~ 256 (303)
...+.+|..... ...++|. ..+++++|++|+.|++|++||+.+++ .+..+.+|..+|.
T Consensus 138 -------~~~~~~h~~~v~--~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~ 208 (297)
T 2pm7_B 138 -------PIIIDAHAIGVN--SASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVR 208 (297)
T ss_dssp -------CEEEECCSSCEE--EEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEE
T ss_pred -------eeeeecccCccc--eEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceE
Confidence 001111111110 1111110 01236789999999999999998765 5667889999999
Q ss_pred EEEECCCC---CeEEEEeCCCCEEEeecCC
Q 022074 257 DCSWHPSQ---PMLVSSSWDGDVVRWEFPG 283 (303)
Q Consensus 257 ~v~~sp~~---~~las~s~Dg~i~~Wd~~~ 283 (303)
+++|+|++ ++|||++.|+++++||+..
T Consensus 209 ~v~~sp~~~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 209 DVAWSPTVLLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp EEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred EEEECCCCCCceEEEEEECCCcEEEEEeCC
Confidence 99999995 7999999999999999865
No 12
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=7.6e-33 Score=241.94 Aligned_cols=258 Identities=24% Similarity=0.378 Sum_probs=196.1
Q ss_pred CchhhccccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEcc
Q 022074 12 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGD 91 (303)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~ 91 (303)
+|+.|..+.||+..+|... ....+|..+|.+++|+|++++|++|+.|++|++||+.+++....+.+|...|.+++|++
T Consensus 40 s~~~dg~i~iw~~~~~~~~--~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~ 117 (312)
T 4ery_A 40 SSSADKLIKIWGAYDGKFE--KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP 117 (312)
T ss_dssp EEETTSCEEEEETTTCCEE--EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECS
T ss_pred EeeCCCeEEEEeCCCcccc--hhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC
Confidence 4567788899988666533 23479999999999999999999999999999999999998888999999999999975
Q ss_pred CCCcEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCcc
Q 022074 92 ESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFR 171 (303)
Q Consensus 92 ~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~ 171 (303)
++++|++++.|++|++||++ ..+....+..|...|.++.+++++++|++++.|+.|++||++............
T Consensus 118 -~~~~l~s~~~d~~i~iwd~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~- 191 (312)
T 4ery_A 118 -QSNLIVSGSFDESVRIWDVK----TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD- 191 (312)
T ss_dssp -SSSEEEEEETTSCEEEEETT----TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSS-
T ss_pred -CCCEEEEEeCCCcEEEEECC----CCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccC-
Confidence 57899999999999999986 334566778899999999999999999999999999999998643221111000
Q ss_pred ceeeeceeeeCCCCCccccCCC-CCcceEEe-----------cccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEEC
Q 022074 172 SYEWDYRWMDYPPQARDLKHPC-DQSVATYK-----------GHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDL 239 (303)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----------~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~ 239 (303)
...+..+.+.+....+.... +..+..++ ++........ .....+++++|++|+.||.|++||+
T Consensus 192 --~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~sg~~dg~i~vwd~ 266 (312)
T 4ery_A 192 --NPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIF---ANFSVTGGKWIVSGSEDNLVYIWNL 266 (312)
T ss_dssp --CCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCC---EEEECSSSCEEEECCTTSCEEEEET
T ss_pred --CCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEE---EEEEeCCCcEEEEECCCCEEEEEEC
Confidence 11112234444444332221 22232222 2211111110 1112357889999999999999999
Q ss_pred CCCeEEEEeecCCCCeEEEEECCCCCeEEEEe--CCCCEEEeecC
Q 022074 240 VSGEQVAALKYHTSPVRDCSWHPSQPMLVSSS--WDGDVVRWEFP 282 (303)
Q Consensus 240 ~~~~~~~~~~~h~~~I~~v~~sp~~~~las~s--~Dg~i~~Wd~~ 282 (303)
.+++.+..+.+|..+|.+++|+|++++|++++ .|++|++|+..
T Consensus 267 ~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 267 QTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp TTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred CCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 99999999999999999999999999999997 69999999964
No 13
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=4.1e-33 Score=248.24 Aligned_cols=204 Identities=21% Similarity=0.259 Sum_probs=163.0
Q ss_pred CcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEE----EEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCc
Q 022074 37 GYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSL----RILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRR 112 (303)
Q Consensus 37 ~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~----~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~ 112 (303)
.|+.+|.+++|++++ .+++|+.||+|+|||+.+++... ...+|.+.|.+++|++ ++++|++|+.|++|++||++
T Consensus 80 ~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~sp-dg~~l~sgs~d~~i~iwd~~ 157 (344)
T 4gqb_B 80 QTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLS-SGTQAVSGSKDICIKVWDLA 157 (344)
T ss_dssp EESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEETT
T ss_pred ccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECC-CCCEEEEEeCCCeEEEEECC
Confidence 456789999999985 68899999999999999886432 3458999999999975 58899999999999999986
Q ss_pred cccCCCccceeecccccCeEEEEeCCCC-CEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccC
Q 022074 113 CLNVKGKPAGVLMGHLEGITFIDSRGDG-RYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKH 191 (303)
Q Consensus 113 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (303)
.++....+.+|.+.|.+++|++++ .+|++++.|++|++||++..+.......
T Consensus 158 ----~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~----------------------- 210 (344)
T 4gqb_B 158 ----QQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGC----------------------- 210 (344)
T ss_dssp ----TTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC------------------------
T ss_pred ----CCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeec-----------------------
Confidence 445677888999999999999987 5789999999999999975432111000
Q ss_pred CCCCcceEEecccceeeeEEEeeeeeeeC-CCeEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEECCCC-CeEEE
Q 022074 192 PCDQSVATYKGHSVLRTLIRCHFSPVYST-GQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQ-PMLVS 269 (303)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~latg~~dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~-~~las 269 (303)
..+... . .+..|+| ++++|++|+.||.|++||+++++.+..+.+|..+|++++|+|++ ++|||
T Consensus 211 ---------~~~~~~--~----~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~las 275 (344)
T 4gqb_B 211 ---------SAPGYL--P----TSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLAS 275 (344)
T ss_dssp ------------CCC--E----EEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEE
T ss_pred ---------ceeecc--c----eeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEE
Confidence 000000 0 1122444 56789999999999999999999999999999999999999998 58999
Q ss_pred EeCCCCEEEeecCCC
Q 022074 270 SSWDGDVVRWEFPGN 284 (303)
Q Consensus 270 ~s~Dg~i~~Wd~~~~ 284 (303)
++.|++|++||....
T Consensus 276 gs~D~~i~vwd~~~~ 290 (344)
T 4gqb_B 276 LSEDCSLAVLDSSLS 290 (344)
T ss_dssp EETTSCEEEECTTCC
T ss_pred EeCCCeEEEEECCCC
Confidence 999999999998654
No 14
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=4.4e-32 Score=236.41 Aligned_cols=263 Identities=18% Similarity=0.203 Sum_probs=190.0
Q ss_pred hhccccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCC
Q 022074 15 MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESG 94 (303)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~ 94 (303)
+|..+.||+.-+|.........+|...|.+++|+|+|+++++|+.||+|+|||+.+++....+.+|...+.++.+. +
T Consensus 43 ~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~---~ 119 (318)
T 4ggc_A 43 LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN---S 119 (318)
T ss_dssp ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEE---T
T ss_pred eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecC---C
Confidence 4788899998887644334457899999999999999999999999999999999999888899999988887763 4
Q ss_pred cEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCcccee
Q 022074 95 HLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYE 174 (303)
Q Consensus 95 ~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~ 174 (303)
+.+++++.++.+++|+... .......+.+|...+..+.+.++++++++++.|+.|++||++................
T Consensus 120 ~~l~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 196 (318)
T 4ggc_A 120 YILSSGSRSGHIHHHDVRV---AEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQ 196 (318)
T ss_dssp TEEEEEETTSEEEEEETTS---SSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCC
T ss_pred CEEEEEecCCceEeeecCC---CceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccC
Confidence 6899999999999998642 2344566788999999999999999999999999999999986432211111000001
Q ss_pred eeceeeeCCCCCcccc----CCCCCcceEEecccceeeeEE----EeeeeeeeCCCeEEEEEe--CCCeEEEEECCCCeE
Q 022074 175 WDYRWMDYPPQARDLK----HPCDQSVATYKGHSVLRTLIR----CHFSPVYSTGQKYIYTGS--HDSCVYVYDLVSGEQ 244 (303)
Q Consensus 175 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~----~~~~~~~s~~~~~latg~--~dg~i~iwd~~~~~~ 244 (303)
..+....+.+....+. ...+..+..++.......... ......+++++..+++++ .|+.|++||+.++++
T Consensus 197 ~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~ 276 (318)
T 4ggc_A 197 GAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAK 276 (318)
T ss_dssp SCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCE
T ss_pred CceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcE
Confidence 1111112222111110 011112222222111110000 011223567777766654 899999999999999
Q ss_pred EEEeecCCCCeEEEEECCCCCeEEEEeCCCCEEEeecCC
Q 022074 245 VAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPG 283 (303)
Q Consensus 245 ~~~~~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~ 283 (303)
+.++++|.++|++++|||++++|||||.||+|++||+..
T Consensus 277 ~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 277 VAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp EEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred EEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 999999999999999999999999999999999999853
No 15
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.3e-32 Score=241.97 Aligned_cols=261 Identities=18% Similarity=0.268 Sum_probs=189.6
Q ss_pred CchhhccccccccccCcCcc---cccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEE
Q 022074 12 SGTMESLANVTEIHDGLDFS---AADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVC 88 (303)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~ 88 (303)
+|+.|..+.+|+.-.+.... .....||+.+|.+++|+|+|+++++|+.|++|+|||+.+++....+.+|...|.+++
T Consensus 35 s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~ 114 (319)
T 3frx_A 35 SASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVD 114 (319)
T ss_dssp EEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEE
T ss_pred EecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEE
Confidence 56778888999875433211 112369999999999999999999999999999999999998888999999999999
Q ss_pred EccCCCcEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCCC------CCEEEEEeCCCcEEEEEcccccC
Q 022074 89 FGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGD------GRYLISNGKDQAIKLWDIRKMSS 162 (303)
Q Consensus 89 ~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~------~~~l~s~~~D~~v~lWdl~~~~~ 162 (303)
|++ ++++|++|+.|++|++||++ ......+.+|...|..+.+.|. +.++++++.|+.|++||++....
T Consensus 115 ~~~-~~~~l~s~s~D~~i~vwd~~-----~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~ 188 (319)
T 3frx_A 115 IDK-KASMIISGSRDKTIKVWTIK-----GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQI 188 (319)
T ss_dssp ECT-TSCEEEEEETTSCEEEEETT-----SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEE
T ss_pred EcC-CCCEEEEEeCCCeEEEEECC-----CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchh
Confidence 975 57899999999999999975 2345677889999999999874 45899999999999999975432
Q ss_pred CcccccCccceeeeceeeeCCCCCccccCCC-CCcceEEeccccee-eeEE---EeeeeeeeCCCeEEEEEeCCCeEEEE
Q 022074 163 NASCNLGFRSYEWDYRWMDYPPQARDLKHPC-DQSVATYKGHSVLR-TLIR---CHFSPVYSTGQKYIYTGSHDSCVYVY 237 (303)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~---~~~~~~~s~~~~~latg~~dg~i~iw 237 (303)
... +......+..+.+.|+...+.... +..+..++-..... .... ......|+|++.++++++.+ .+++|
T Consensus 189 ~~~----~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~-~i~v~ 263 (319)
T 3frx_A 189 EAD----FIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATAT-GIKVF 263 (319)
T ss_dssp EEE----ECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEETT-EEEEE
T ss_pred hee----ecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCC-CcEEE
Confidence 111 111122233344555554443322 33444444322111 0111 12234577888888777644 48888
Q ss_pred ECCCCeEEEEee--------cCCCCeEEEEECCCCCeEEEEeCCCCEEEeecCC
Q 022074 238 DLVSGEQVAALK--------YHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPG 283 (303)
Q Consensus 238 d~~~~~~~~~~~--------~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~ 283 (303)
++..+..+..+. .|...+.+++||||+++|++|+.|++|++||+..
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 264 SLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp EETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEE
T ss_pred EeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEee
Confidence 887766655543 3456789999999999999999999999999753
No 16
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=4.4e-32 Score=247.32 Aligned_cols=269 Identities=18% Similarity=0.213 Sum_probs=197.5
Q ss_pred EEEccCchhhccccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEE
Q 022074 7 IVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNT 86 (303)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~ 86 (303)
+|-||+ |..+.||+.-+|.-.......+|...|.+|+|+|+|++|++|+.||+|+|||+.+++....+.+|...+.+
T Consensus 118 ~lAvgl---d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~ 194 (420)
T 4gga_A 118 VLAVAL---DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGS 194 (420)
T ss_dssp EEEEEE---TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred EEEEEe---CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEE
Confidence 455664 56788888877764333344689999999999999999999999999999999999988889999999999
Q ss_pred EEEccCCCcEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCccc
Q 022074 87 VCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASC 166 (303)
Q Consensus 87 l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~ 166 (303)
+.++ ++.+++|+.|+.+++||.+. .......+.+|...+..+.+.+++.++++++.|+.+++||++........
T Consensus 195 ~s~~---~~~l~sgs~d~~i~~~d~~~---~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~ 268 (420)
T 4gga_A 195 LSWN---SYILSSGSRSGHIHHHDVRV---AEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVP 268 (420)
T ss_dssp EEEE---TTEEEEEETTSEEEEEETTS---SSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCC
T ss_pred EeeC---CCEEEEEeCCCceeEeeecc---cceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeecccccccee
Confidence 9884 46999999999999999753 23445677899999999999999999999999999999998764322111
Q ss_pred ccCccceeeeceeeeCCCCCcccc-C---CCCCcceEEeccccee-eeEE---EeeeeeeeCCCeEEEEEe--CCCeEEE
Q 022074 167 NLGFRSYEWDYRWMDYPPQARDLK-H---PCDQSVATYKGHSVLR-TLIR---CHFSPVYSTGQKYIYTGS--HDSCVYV 236 (303)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~-~~~~---~~~~~~~s~~~~~latg~--~dg~i~i 236 (303)
..........+..+.+.+....+. . ..++.+..++-..... .... ...+..++++++.+++++ .|+.|++
T Consensus 269 ~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~i 348 (420)
T 4gga_A 269 LQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVI 348 (420)
T ss_dssp SEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEE
T ss_pred eeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEE
Confidence 000111111122233333222221 1 1233343333221110 0000 112234677788777754 7999999
Q ss_pred EECCCCeEEEEeecCCCCeEEEEECCCCCeEEEEeCCCCEEEeecCCC
Q 022074 237 YDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 237 wd~~~~~~~~~~~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~~ 284 (303)
||+.+++++..+.+|.++|++++||||+++||||+.|++|++||+...
T Consensus 349 wd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~ 396 (420)
T 4gga_A 349 WKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 396 (420)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCS
T ss_pred EECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 999999999999999999999999999999999999999999998643
No 17
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.4e-32 Score=242.39 Aligned_cols=208 Identities=20% Similarity=0.324 Sum_probs=175.8
Q ss_pred CCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccc
Q 022074 35 DGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCL 114 (303)
Q Consensus 35 ~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~ 114 (303)
..||..+|.+++|+|++++|++|+.||+|+|||+.++.....+..|...|.+++|+| +++++++|+.|+.|++||+...
T Consensus 51 l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~d~~v~iw~~~~~ 129 (340)
T 1got_B 51 LRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAP-SGNYVACGGLDNICSIYNLKTR 129 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECT-TSSEEEEEETTCEEEEEETTTC
T ss_pred ecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECC-CCCEEEEEeCCCeEEEEECccC
Confidence 369999999999999999999999999999999999988888889999999999975 5889999999999999998643
Q ss_pred cCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCC
Q 022074 115 NVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCD 194 (303)
Q Consensus 115 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (303)
.........+.+|...|.++.+++++ .+++++.|++|++||++....
T Consensus 130 ~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~~wd~~~~~~-------------------------------- 176 (340)
T 1got_B 130 EGNVRVSRELAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETGQQ-------------------------------- 176 (340)
T ss_dssp SBSCEEEEEEECCSSCEEEEEEEETT-EEEEEETTSCEEEEETTTTEE--------------------------------
T ss_pred CCcceeEEEecCCCccEEEEEECCCC-cEEEEECCCcEEEEECCCCcE--------------------------------
Confidence 22223455678899999999998766 599999999999999864221
Q ss_pred CcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEECCCCCeEEEEeCCC
Q 022074 195 QSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDG 274 (303)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~~las~s~Dg 274 (303)
+..+.+|.... ....|+|+++++++|+.|+.|++||+.+++.+..+.+|..+|++++|+|++++|++++.||
T Consensus 177 --~~~~~~h~~~v------~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~ 248 (340)
T 1got_B 177 --TTTFTGHTGDV------MSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDA 248 (340)
T ss_dssp --EEEECCCSSCE------EEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred --EEEEcCCCCce------EEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCC
Confidence 12233332211 1234678899999999999999999999999999999999999999999999999999999
Q ss_pred CEEEeecCCC
Q 022074 275 DVVRWEFPGN 284 (303)
Q Consensus 275 ~i~~Wd~~~~ 284 (303)
++++||+...
T Consensus 249 ~v~iwd~~~~ 258 (340)
T 1got_B 249 TCRLFDLRAD 258 (340)
T ss_dssp CEEEEETTTT
T ss_pred cEEEEECCCC
Confidence 9999998754
No 18
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=2.8e-32 Score=239.12 Aligned_cols=244 Identities=23% Similarity=0.292 Sum_probs=178.1
Q ss_pred CCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCc----eEEEEecccCCeEEEEEccC-CCcEEEEecCCCeEEEE
Q 022074 35 DGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANK----LSLRILAHTSDVNTVCFGDE-SGHLIYSGSDDNLCKVW 109 (303)
Q Consensus 35 ~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~----~~~~~~~h~~~v~~l~~~~~-~~~~l~s~s~dg~v~lW 109 (303)
..||+.+|.+++|+|++++|++|+.||+|+|||+.++. ....+.+|...|.+++|++. ++++|++++.||+|++|
T Consensus 7 ~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vw 86 (351)
T 3f3f_A 7 DSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLW 86 (351)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEE
T ss_pred CcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEE
Confidence 37999999999999999999999999999999998763 45566789999999999764 47899999999999999
Q ss_pred cCccccCCC-----ccceeecccccCeEEEEeCCC--CCEEEEEeCCCcEEEEEcccccCCcccccCcc---------ce
Q 022074 110 DRRCLNVKG-----KPAGVLMGHLEGITFIDSRGD--GRYLISNGKDQAIKLWDIRKMSSNASCNLGFR---------SY 173 (303)
Q Consensus 110 d~~~~~~~~-----~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~---------~~ 173 (303)
|++...... .....+.+|...|.++.++++ +.+|++++.|+.|++||++............. ..
T Consensus 87 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (351)
T 3f3f_A 87 EEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANH 166 (351)
T ss_dssp EECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSC
T ss_pred ecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCc
Confidence 986432111 335567789999999999999 99999999999999999986543322111000 00
Q ss_pred eeeceeeeCCCC---CccccCCC-CCc-------------ceEEecccceeeeEEEeeeeeeeCCC----eEEEEEeCCC
Q 022074 174 EWDYRWMDYPPQ---ARDLKHPC-DQS-------------VATYKGHSVLRTLIRCHFSPVYSTGQ----KYIYTGSHDS 232 (303)
Q Consensus 174 ~~~~~~~~~~~~---~~~~~~~~-~~~-------------~~~~~~~~~~~~~~~~~~~~~~s~~~----~~latg~~dg 232 (303)
......+.+.|. ...+.... +.. +..+.+|... .....|+|++ ++|++|+.||
T Consensus 167 ~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~------i~~~~~~p~~~~~~~~l~s~~~dg 240 (351)
T 3f3f_A 167 LQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSL------IRSISWAPSIGRWYQLIATGCKDG 240 (351)
T ss_dssp SCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSC------EEEEEECCCSSCSSEEEEEEETTS
T ss_pred ccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcc------eeEEEECCCCCCcceEEEEEcCCC
Confidence 000111122221 11111111 001 1111222111 1233477887 8999999999
Q ss_pred eEEEEECCCC----------------------------------------------eEEEEeecCCCCeEEEEECCCCCe
Q 022074 233 CVYVYDLVSG----------------------------------------------EQVAALKYHTSPVRDCSWHPSQPM 266 (303)
Q Consensus 233 ~i~iwd~~~~----------------------------------------------~~~~~~~~h~~~I~~v~~sp~~~~ 266 (303)
.|++||+.++ +.+..+.+|..+|++++|+|++++
T Consensus 241 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~ 320 (351)
T 3f3f_A 241 RIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTI 320 (351)
T ss_dssp CEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCC
T ss_pred eEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCE
Confidence 9999999764 567778899999999999999999
Q ss_pred EEEEeCCCCEEEeecCCC
Q 022074 267 LVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 267 las~s~Dg~i~~Wd~~~~ 284 (303)
|++++.||.|++|++...
T Consensus 321 l~s~~~dg~v~iw~~~~~ 338 (351)
T 3f3f_A 321 LSSAGDDGKVRLWKATYS 338 (351)
T ss_dssp EEEEETTSCEEEEEECTT
T ss_pred EEEecCCCcEEEEecCcC
Confidence 999999999999998753
No 19
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.5e-32 Score=238.55 Aligned_cols=206 Identities=18% Similarity=0.245 Sum_probs=171.2
Q ss_pred CCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccc
Q 022074 35 DGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCL 114 (303)
Q Consensus 35 ~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~ 114 (303)
..||+.+|.+++|+|+|++|++|+.||+|+|||+.++.....+..|...|.+++|++ ++++|++|+.|++|++||++
T Consensus 9 ~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~s~d~~i~vwd~~-- 85 (304)
T 2ynn_A 9 FSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIA-RKNWIIVGSDDFRIRVFNYN-- 85 (304)
T ss_dssp EEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEG-GGTEEEEEETTSEEEEEETT--
T ss_pred ecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeC-CCCEEEEECCCCEEEEEECC--
Confidence 368999999999999999999999999999999999988888889999999999975 57899999999999999975
Q ss_pred cCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCC
Q 022074 115 NVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCD 194 (303)
Q Consensus 115 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (303)
+++....+.+|.+.|.+++++|++++|++++.|++|++||++....
T Consensus 86 --~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~-------------------------------- 131 (304)
T 2ynn_A 86 --TGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWA-------------------------------- 131 (304)
T ss_dssp --TCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTE--------------------------------
T ss_pred --CCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcc--------------------------------
Confidence 3455667889999999999999999999999999999999864210
Q ss_pred CcceEEecccceeeeEEEeeeeeeeC-CCeEEEEEeCCCeEEEEECCCCeEEEEe-ecCCCCeEEEEECC--CCCeEEEE
Q 022074 195 QSVATYKGHSVLRTLIRCHFSPVYST-GQKYIYTGSHDSCVYVYDLVSGEQVAAL-KYHTSPVRDCSWHP--SQPMLVSS 270 (303)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~latg~~dg~i~iwd~~~~~~~~~~-~~h~~~I~~v~~sp--~~~~las~ 270 (303)
....+.+|..... +..|+| ++.+|++|+.|++|++||+.+++....+ .+|...+..++|+| ++++|+++
T Consensus 132 -~~~~~~~h~~~v~------~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~ 204 (304)
T 2ynn_A 132 -LEQTFEGHEHFVM------CVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITA 204 (304)
T ss_dssp -EEEEECCCCSCEE------EEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEE
T ss_pred -hhhhhcccCCcEE------EEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEE
Confidence 0112233332111 233666 6789999999999999999887765544 45668899999987 67899999
Q ss_pred eCCCCEEEeecCCC
Q 022074 271 SWDGDVVRWEFPGN 284 (303)
Q Consensus 271 s~Dg~i~~Wd~~~~ 284 (303)
+.|++|++||+...
T Consensus 205 s~D~~i~iWd~~~~ 218 (304)
T 2ynn_A 205 SDDLTIKIWDYQTK 218 (304)
T ss_dssp ETTSEEEEEETTTT
T ss_pred cCCCeEEEEeCCCC
Confidence 99999999998653
No 20
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=4e-32 Score=236.47 Aligned_cols=234 Identities=17% Similarity=0.232 Sum_probs=178.0
Q ss_pred CchhhccccccccccCcCcccccCCCcccceEEEEEcCC--CCEEEEeeCCCeEEEEECCCCc--eEEEEecccCCeEEE
Q 022074 12 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD--GRELVAGSSDDCIYVYDLEANK--LSLRILAHTSDVNTV 87 (303)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~--g~~l~sgs~Dg~v~lwd~~~~~--~~~~~~~h~~~v~~l 87 (303)
+|+.|..+.||+.-.+.........||+.+|.+++|+++ |++|++|+.|++|+|||+.++. ....+..|...|.++
T Consensus 26 s~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v 105 (297)
T 2pm7_B 26 TCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSV 105 (297)
T ss_dssp EEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEE
T ss_pred EEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEE
Confidence 567888899998743321112334799999999999864 8999999999999999998874 344567899999999
Q ss_pred EEccCC-CcEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCCC-------------CCEEEEEeCCCcEE
Q 022074 88 CFGDES-GHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGD-------------GRYLISNGKDQAIK 153 (303)
Q Consensus 88 ~~~~~~-~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-------------~~~l~s~~~D~~v~ 153 (303)
+|+|+. +.+|++++.|++|++||++... ......+.+|...|.+++|+|+ +++|++++.|++|+
T Consensus 106 ~~~p~~~g~~l~s~s~d~~v~~wd~~~~~--~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~ 183 (297)
T 2pm7_B 106 QWAPHEYGPMLLVASSDGKVSVVEFKENG--TTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVK 183 (297)
T ss_dssp EECCGGGCSEEEEEETTSEEEEEEBCSSS--CBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEE
T ss_pred EeCcCCCCcEEEEEECCCcEEEEEecCCC--ceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEE
Confidence 997642 6899999999999999986321 1123456789999999999986 56999999999999
Q ss_pred EEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCC---CeEEEEEeC
Q 022074 154 LWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTG---QKYIYTGSH 230 (303)
Q Consensus 154 lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~---~~~latg~~ 230 (303)
+||++....... ....+.+|..... ...|+|+ +++||+|+.
T Consensus 184 lwd~~~~~~~~~------------------------------~~~~l~~H~~~V~------~v~~sp~~~~~~~las~s~ 227 (297)
T 2pm7_B 184 IWKYNSDAQTYV------------------------------LESTLEGHSDWVR------DVAWSPTVLLRSYMASVSQ 227 (297)
T ss_dssp EEEEETTTTEEE------------------------------EEEEECCCSSCEE------EEEECCCCSSSEEEEEEET
T ss_pred EEEEcCCCceEE------------------------------EEEEecCCCCceE------EEEECCCCCCceEEEEEEC
Confidence 999874321000 1123344432221 2336666 489999999
Q ss_pred CCeEEEEECCCCe---EEEEe--ecCCCCeEEEEECCCCCeEEEEeCCCCEEEeecCC
Q 022074 231 DSCVYVYDLVSGE---QVAAL--KYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPG 283 (303)
Q Consensus 231 dg~i~iwd~~~~~---~~~~~--~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~ 283 (303)
|++|++||+.+.+ ....+ ..|..+|++++|+|++++||+++.|+++++|+...
T Consensus 228 D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 228 DRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp TSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred CCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 9999999997642 22233 46788999999999999999999999999999753
No 21
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-32 Score=244.45 Aligned_cols=206 Identities=20% Similarity=0.279 Sum_probs=167.9
Q ss_pred CCccc-ceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEE---EecccCCeEEEEEccCCCcEEEEecCCCeEEEEcC
Q 022074 36 GGYSF-GIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLR---ILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDR 111 (303)
Q Consensus 36 ~~~~~-~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~---~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~ 111 (303)
.||.. +|.+++|+|+|++|++|+.|++|+|||+.++..... ..+|...|.+++|+| ++++|++|+.|++|++||.
T Consensus 12 ~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp-~g~~l~s~s~D~~v~iw~~ 90 (345)
T 3fm0_A 12 PAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSP-CGNYLASASFDATTCIWKK 90 (345)
T ss_dssp CCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECT-TSSEEEEEETTSCEEEEEE
T ss_pred cCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECC-CCCEEEEEECCCcEEEEEc
Confidence 57877 899999999999999999999999999988764322 257999999999975 5889999999999999997
Q ss_pred ccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccC
Q 022074 112 RCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKH 191 (303)
Q Consensus 112 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (303)
... .......+.+|...|.+++|+|++++|++++.|++|++||++.....
T Consensus 91 ~~~--~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~---------------------------- 140 (345)
T 3fm0_A 91 NQD--DFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEY---------------------------- 140 (345)
T ss_dssp CCC---EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCE----------------------------
T ss_pred cCC--CeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCe----------------------------
Confidence 521 12335567899999999999999999999999999999998642110
Q ss_pred CCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCe--EEEEeecCCCCeEEEEECCCCCeEEE
Q 022074 192 PCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGE--QVAALKYHTSPVRDCSWHPSQPMLVS 269 (303)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~--~~~~~~~h~~~I~~v~~sp~~~~las 269 (303)
..+..+.+|.... ....|+|++++|++|+.|+.|++||..+++ ....+.+|..+|++++|+|++++|++
T Consensus 141 ---~~~~~~~~h~~~v------~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s 211 (345)
T 3fm0_A 141 ---ECVSVLNSHTQDV------KHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLAS 211 (345)
T ss_dssp ---EEEEEECCCCSCE------EEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred ---EEEEEecCcCCCe------EEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEE
Confidence 0111222332111 123467889999999999999999998875 35678899999999999999999999
Q ss_pred EeCCCCEEEeec
Q 022074 270 SSWDGDVVRWEF 281 (303)
Q Consensus 270 ~s~Dg~i~~Wd~ 281 (303)
++.|++|++|+.
T Consensus 212 ~s~D~~v~iW~~ 223 (345)
T 3fm0_A 212 CSDDRTVRIWRQ 223 (345)
T ss_dssp EETTSCEEEEEE
T ss_pred EeCCCeEEEecc
Confidence 999999999996
No 22
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=6.7e-32 Score=241.04 Aligned_cols=210 Identities=20% Similarity=0.280 Sum_probs=174.9
Q ss_pred CCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCcccc
Q 022074 36 GGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLN 115 (303)
Q Consensus 36 ~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~ 115 (303)
.||+.+|.+++|+|++++|++|+.||+|+|||..++.....+..|...|.+++|+| +++.+++++.|+.+++|++....
T Consensus 61 ~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp-~g~~lasg~~d~~i~v~~~~~~~ 139 (354)
T 2pbi_B 61 KGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAP-SGCAIACGGLDNKCSVYPLTFDK 139 (354)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECT-TSSEEEEESTTSEEEEEECCCCT
T ss_pred cCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECC-CCCEEEEeeCCCCEEEEEEeccc
Confidence 59999999999999999999999999999999999988888888999999999975 58899999999999999975321
Q ss_pred C--CCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCC
Q 022074 116 V--KGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPC 193 (303)
Q Consensus 116 ~--~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (303)
. .......+.+|...|.++.|++++.+|++++.|++|++||++...
T Consensus 140 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~-------------------------------- 187 (354)
T 2pbi_B 140 NENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQ-------------------------------- 187 (354)
T ss_dssp TCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC--------------------------------
T ss_pred cccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCe--------------------------------
Confidence 1 112345667899999999999999999999999999999986422
Q ss_pred CCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEECCCCCeEEEEeCC
Q 022074 194 DQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWD 273 (303)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~~las~s~D 273 (303)
.+..+.+|......+. +. +++++.+|++|+.||.|++||+++++.+..+.+|..+|++++|+|++++|++++.|
T Consensus 188 --~~~~~~~h~~~v~~~~--~~--~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D 261 (354)
T 2pbi_B 188 --LLQSFHGHGADVLCLD--LA--PSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDD 261 (354)
T ss_dssp --EEEEEECCSSCEEEEE--EC--CCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred --EEEEEcCCCCCeEEEE--EE--eCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCC
Confidence 1223334432222211 11 12357899999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeecCCC
Q 022074 274 GDVVRWEFPGN 284 (303)
Q Consensus 274 g~i~~Wd~~~~ 284 (303)
+++++||+...
T Consensus 262 ~~v~lwd~~~~ 272 (354)
T 2pbi_B 262 ATCRLYDLRAD 272 (354)
T ss_dssp SCEEEEETTTT
T ss_pred CeEEEEECCCC
Confidence 99999998654
No 23
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.6e-32 Score=241.15 Aligned_cols=246 Identities=17% Similarity=0.211 Sum_probs=167.9
Q ss_pred cCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCc--eEEEEecccCCeEEEEEccC-CCcEEEEecCCCeEEEEc
Q 022074 34 DDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANK--LSLRILAHTSDVNTVCFGDE-SGHLIYSGSDDNLCKVWD 110 (303)
Q Consensus 34 ~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~--~~~~~~~h~~~v~~l~~~~~-~~~~l~s~s~dg~v~lWd 110 (303)
...||+.+|.+++|+|+|++|++|+.|++|+|||+.++. ....+.+|.+.|.+++|+++ ++++|+||+.|++|++||
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 447999999999999999999999999999999998875 34567899999999999754 478999999999999999
Q ss_pred CccccCCCccceeecccccCeEEEEeCCC--CCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCC---
Q 022074 111 RRCLNVKGKPAGVLMGHLEGITFIDSRGD--GRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQ--- 185 (303)
Q Consensus 111 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 185 (303)
++.. .......+.+|...|.+++|+|+ +.+|++++.|++|++||++...... ...........+..+.+.|.
T Consensus 88 ~~~~--~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~ 164 (316)
T 3bg1_A 88 EENG--TWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWE-VKKINNAHTIGCNAVSWAPAVVP 164 (316)
T ss_dssp CSSS--CCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEE-ECCBTTSSSSCBCCCEECCCCCC
T ss_pred CCCC--cceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcc-eeeeeccccCCcceEEEccccCC
Confidence 8632 11234467789999999999997 7899999999999999987531100 00000000001111111111
Q ss_pred --------------CccccCC-CCCcceEEecccc----eeeeEEEe----eeeeeeCCC----eEEEEEeCCCeEEEEE
Q 022074 186 --------------ARDLKHP-CDQSVATYKGHSV----LRTLIRCH----FSPVYSTGQ----KYIYTGSHDSCVYVYD 238 (303)
Q Consensus 186 --------------~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~----~~~~~s~~~----~~latg~~dg~i~iwd 238 (303)
...+... .+..+..++-... ....+..| ....|+|++ ++|++|+.|++|++||
T Consensus 165 ~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~ 244 (316)
T 3bg1_A 165 GSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWT 244 (316)
T ss_dssp ------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEE
T ss_pred ccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEE
Confidence 1122222 2333333322110 00011111 223466765 7899999999999999
Q ss_pred CCCC---e-EEEEeecCCCCeEEEEECCCCCeEEEEeCCCCEEEeecC
Q 022074 239 LVSG---E-QVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFP 282 (303)
Q Consensus 239 ~~~~---~-~~~~~~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~ 282 (303)
+.+. + ....+..|..+|++++|+|++++||+++.|+++++|+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 245 CDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp CSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred ccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 8762 1 123456789999999999999999999999999999975
No 24
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.7e-32 Score=246.75 Aligned_cols=237 Identities=24% Similarity=0.385 Sum_probs=183.2
Q ss_pred CchhhccccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEcc
Q 022074 12 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGD 91 (303)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~ 91 (303)
+|+.|..+.||++-+|... ....||..+|.+++|+|++++|++|+.|++|++||+.+++....+ .+...+.+++|++
T Consensus 140 s~~~d~~i~iwd~~~~~~~--~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~-~~~~~v~~~~~~~ 216 (393)
T 1erj_A 140 TGAEDRLIRIWDIENRKIV--MILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTL-SIEDGVTTVAVSP 216 (393)
T ss_dssp EEETTSCEEEEETTTTEEE--EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE-ECSSCEEEEEECS
T ss_pred EEcCCCeEEEEECCCCcEE--EEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEE-EcCCCcEEEEEEC
Confidence 4567888899988555422 234799999999999999999999999999999999998766544 4667899999987
Q ss_pred CCCcEEEEecCCCeEEEEcCccccCCCcccee-------ecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCc
Q 022074 92 ESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGV-------LMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNA 164 (303)
Q Consensus 92 ~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~-------~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~ 164 (303)
.++++|++|+.|++|++||.+.. ..... ..+|...|.+++|++++++|++++.|++|++||++......
T Consensus 217 ~~~~~l~~~s~d~~v~iwd~~~~----~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~ 292 (393)
T 1erj_A 217 GDGKYIAAGSLDRAVRVWDSETG----FLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKS 292 (393)
T ss_dssp TTCCEEEEEETTSCEEEEETTTC----CEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-------
T ss_pred CCCCEEEEEcCCCcEEEEECCCC----cEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcc
Confidence 67899999999999999997632 22222 25799999999999999999999999999999997532211
Q ss_pred ccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeE
Q 022074 165 SCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQ 244 (303)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~ 244 (303)
.... .........+.+|.... .+..+++++++|++|+.|+.|++||..+++.
T Consensus 293 ~~~~----------------------~~~~~~~~~~~~h~~~v------~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~ 344 (393)
T 1erj_A 293 DSKT----------------------PNSGTCEVTYIGHKDFV------LSVATTQNDEYILSGSKDRGVLFWDKKSGNP 344 (393)
T ss_dssp ------------------------------CEEEEEECCSSCE------EEEEECGGGCEEEEEETTSEEEEEETTTCCE
T ss_pred cccC----------------------CCCCcceEEEecccCcE------EEEEECCCCCEEEEEeCCCeEEEEECCCCeE
Confidence 0000 00011223444444222 1234677899999999999999999999999
Q ss_pred EEEeecCCCCeEEEEECC------CCCeEEEEeCCCCEEEeecCC
Q 022074 245 VAALKYHTSPVRDCSWHP------SQPMLVSSSWDGDVVRWEFPG 283 (303)
Q Consensus 245 ~~~~~~h~~~I~~v~~sp------~~~~las~s~Dg~i~~Wd~~~ 283 (303)
+..+.+|..+|.+++|++ ++++||||+.||+|++|++..
T Consensus 345 ~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 345 LLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp EEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred EEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 999999999999999986 678999999999999999753
No 25
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.6e-32 Score=242.74 Aligned_cols=245 Identities=19% Similarity=0.279 Sum_probs=180.2
Q ss_pred CchhhccccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCce---EEEEecccCCeEEEE
Q 022074 12 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKL---SLRILAHTSDVNTVC 88 (303)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~---~~~~~~h~~~v~~l~ 88 (303)
+|+.|..+.||+.-.+.........||+.+|.+++|+|+|++|++|+.|++|++||+.++.. ...+..|...|.+++
T Consensus 78 s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~ 157 (345)
T 3fm0_A 78 SASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVV 157 (345)
T ss_dssp EEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEE
T ss_pred EEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEE
Confidence 56778888888875443211234479999999999999999999999999999999987643 345678999999999
Q ss_pred EccCCCcEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCccccc
Q 022074 89 FGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNL 168 (303)
Q Consensus 89 ~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~ 168 (303)
|+| ++++|++++.|++|++||.+.. .......+.+|...|.+++|+|++++|++++.|++|++||++..........
T Consensus 158 ~~p-~~~~l~s~s~d~~i~~w~~~~~--~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~ 234 (345)
T 3fm0_A 158 WHP-SQELLASASYDDTVKLYREEED--DWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVAC 234 (345)
T ss_dssp ECS-SSSCEEEEETTSCEEEEEEETT--EEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCC
T ss_pred ECC-CCCEEEEEeCCCcEEEEEecCC--CEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCcccee
Confidence 975 5789999999999999997521 1123456789999999999999999999999999999999754221110000
Q ss_pred CccceeeeceeeeCCCCCccccCCCCCcceEEec-ccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCe----
Q 022074 169 GFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKG-HSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGE---- 243 (303)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~---- 243 (303)
.... .....+..+.+ |... .....|++++..|++++.|+.|++|+...+.
T Consensus 235 ~~~~-------------------~~~~~~~~~~~~h~~~------v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~ 289 (345)
T 3fm0_A 235 SGSD-------------------PSWKCICTLSGFHSRT------IYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQ 289 (345)
T ss_dssp C----------------------CEEEEEEEECSSCSSC------EEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTS
T ss_pred eccC-------------------CccceeEEecCCCCCc------EEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcce
Confidence 0000 00011222222 1111 1234577889999999999999999986542
Q ss_pred ----E-EEEeecCCCCeEEEEECCCCC-eEEEEeCCCCEEEeecCCC
Q 022074 244 ----Q-VAALKYHTSPVRDCSWHPSQP-MLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 244 ----~-~~~~~~h~~~I~~v~~sp~~~-~las~s~Dg~i~~Wd~~~~ 284 (303)
. ...+.+|..+|++++|+|+++ +|||++.||+|++|++...
T Consensus 290 ~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~ 336 (345)
T 3fm0_A 290 PTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRP 336 (345)
T ss_dssp CCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC-
T ss_pred eeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCC
Confidence 1 223358999999999999985 9999999999999998754
No 26
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-32 Score=241.13 Aligned_cols=234 Identities=19% Similarity=0.246 Sum_probs=174.7
Q ss_pred ccCchhhccccccccccCc-Cccccc-CCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCC-------CceEEEEecc
Q 022074 10 VGSGTMESLANVTEIHDGL-DFSAAD-DGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEA-------NKLSLRILAH 80 (303)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~-------~~~~~~~~~h 80 (303)
+-+|+.|..+.+|+.-.+. .....- ..+|..+|.+++|+|++++|++|+.|++|+|||+.. ......+.+|
T Consensus 27 las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h 106 (330)
T 2hes_X 27 LATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGH 106 (330)
T ss_dssp EEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC--
T ss_pred EEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCC
Confidence 3456778888999875543 221212 356999999999999999999999999999999853 2344567789
Q ss_pred cCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccc
Q 022074 81 TSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKM 160 (303)
Q Consensus 81 ~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~ 160 (303)
...|.+++|+| ++++|++|+.|++|++||++...........+.+|...|.++.|+|++.+|++++.|++|++||++..
T Consensus 107 ~~~V~~v~~sp-~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~ 185 (330)
T 2hes_X 107 ENEVKGVAWSN-DGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDD 185 (330)
T ss_dssp --CEEEEEECT-TSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETT
T ss_pred CCcEEEEEECC-CCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 99999999975 58899999999999999984222222345667899999999999999999999999999999997532
Q ss_pred cCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCC--CeEEEEEeCCCeEEEEE
Q 022074 161 SSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTG--QKYIYTGSHDSCVYVYD 238 (303)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~--~~~latg~~dg~i~iwd 238 (303)
.. ..+..+.+|..... ...|+|+ +.+|++|+.|++|++||
T Consensus 186 ~~--------------------------------~~~~~~~~h~~~v~------~~~~~~~~~~~~l~s~s~D~~v~iw~ 227 (330)
T 2hes_X 186 DW--------------------------------ECVAVLNGHEGTVW------SSDFDKTEGVFRLCSGSDDSTVRVWK 227 (330)
T ss_dssp EE--------------------------------EEEEEECCCSSCEE------EEEECCSSSSCEEEEEETTSCEEEEE
T ss_pred Ce--------------------------------eEEEEccCCCCcEE------EEEecCCCCeeEEEEEeCCCeEEEEE
Confidence 10 01223344432221 2235666 67899999999999999
Q ss_pred CCCC--------eEEEEeec-CCCCeEEEEECCCCCeEEEEeCCCCEEEeecCC
Q 022074 239 LVSG--------EQVAALKY-HTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPG 283 (303)
Q Consensus 239 ~~~~--------~~~~~~~~-h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~ 283 (303)
+.++ ..+..+.. |..+|++++|++++ +|++++.||+|++|+...
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~ 280 (330)
T 2hes_X 228 YMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVD 280 (330)
T ss_dssp EEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEET
T ss_pred ecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCC
Confidence 8654 33445554 99999999999765 899999999999999754
No 27
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.6e-32 Score=238.43 Aligned_cols=242 Identities=19% Similarity=0.255 Sum_probs=182.0
Q ss_pred cCCCcccceEEEEEcCC----CCEEEEeeCCCeEEEEECCCCceE--EEEecccCCeEEEEEccCCCcEEEEecCCCeEE
Q 022074 34 DDGGYSFGIFSLKFSTD----GRELVAGSSDDCIYVYDLEANKLS--LRILAHTSDVNTVCFGDESGHLIYSGSDDNLCK 107 (303)
Q Consensus 34 ~~~~~~~~v~~l~~s~~----g~~l~sgs~Dg~v~lwd~~~~~~~--~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~ 107 (303)
...||+.+|.+++|+++ ++.|++|+.|++|+|||+.++... ..+.+|...|.++.|++ ++.++++++.|++|+
T Consensus 27 ~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~-~~~~l~s~s~D~~i~ 105 (321)
T 3ow8_A 27 QEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISH-TLPIAASSSLDAHIR 105 (321)
T ss_dssp ETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECS-SSSEEEEEETTSEEE
T ss_pred ecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECC-CCCEEEEEeCCCcEE
Confidence 34799999999999975 678999999999999999877543 35778999999999975 577999999999999
Q ss_pred EEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCc
Q 022074 108 VWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQAR 187 (303)
Q Consensus 108 lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (303)
+||++ .++....+..|...+..++|+|++++|++++.|+.|++||++.......... ....+..+.+.|+.+
T Consensus 106 lWd~~----~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~----~~~~v~~~~~spdg~ 177 (321)
T 3ow8_A 106 LWDLE----NGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDT----RGKFILSIAYSPDGK 177 (321)
T ss_dssp EEETT----TTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEEC----SSSCEEEEEECTTSS
T ss_pred EEECC----CCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecC----CCceEEEEEECCCCC
Confidence 99986 3445566777888899999999999999999999999999976433221111 011122344455554
Q ss_pred cccCCC-CCcceEEecccce-eeeEEE----eeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEC
Q 022074 188 DLKHPC-DQSVATYKGHSVL-RTLIRC----HFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWH 261 (303)
Q Consensus 188 ~~~~~~-~~~~~~~~~~~~~-~~~~~~----~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~s 261 (303)
.+.... +..+..++-.... ...+.. .....|+|++++|++|+.|+.|++||+.+++.+..+.+|..+|.+++|+
T Consensus 178 ~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s 257 (321)
T 3ow8_A 178 YLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC 257 (321)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEEC
T ss_pred EEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEEC
Confidence 443322 2233333221110 001111 1234588999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEeCCCCEEEeecCCC
Q 022074 262 PSQPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 262 p~~~~las~s~Dg~i~~Wd~~~~ 284 (303)
|++++|++++.|+++++||+...
T Consensus 258 p~~~~l~s~s~D~~v~iwd~~~~ 280 (321)
T 3ow8_A 258 PDDTHFVSSSSDKSVKVWDVGTR 280 (321)
T ss_dssp TTSSEEEEEETTSCEEEEETTTT
T ss_pred CCCCEEEEEeCCCcEEEEeCCCC
Confidence 99999999999999999998643
No 28
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-31 Score=235.62 Aligned_cols=209 Identities=21% Similarity=0.336 Sum_probs=162.2
Q ss_pred CCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCc--eEEEE-ec-ccCCeEEEEEccCCCcEEEEecCCCeEEEEcC
Q 022074 36 GGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANK--LSLRI-LA-HTSDVNTVCFGDESGHLIYSGSDDNLCKVWDR 111 (303)
Q Consensus 36 ~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~--~~~~~-~~-h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~ 111 (303)
.||+.+|.+++|+++ +|++|+.|++|+|||+.++. ....+ .. |...|.+++|+| ++++|++|+.|++|++||.
T Consensus 11 ~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp-~~~~las~s~D~~v~iw~~ 87 (330)
T 2hes_X 11 KLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRP-HTSLLAAGSFDSTVSIWAK 87 (330)
T ss_dssp ECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECT-TSSEEEEEETTSCEEEEEC
T ss_pred ccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECC-CCCEEEEEeCCCcEEEEEc
Confidence 589999999999987 99999999999999998753 33334 34 999999999976 5789999999999999997
Q ss_pred cccc---CCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCcc
Q 022074 112 RCLN---VKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARD 188 (303)
Q Consensus 112 ~~~~---~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (303)
+... ........+.+|...|.+++|+|++++|++++.|++|++||++......
T Consensus 88 ~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~------------------------ 143 (330)
T 2hes_X 88 EESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEY------------------------ 143 (330)
T ss_dssp -------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCC------------------------
T ss_pred ccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCe------------------------
Confidence 4211 1223455678999999999999999999999999999999985311000
Q ss_pred ccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCC--eEEEEeecCCCCeEEEEECCC--C
Q 022074 189 LKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSG--EQVAALKYHTSPVRDCSWHPS--Q 264 (303)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~--~~~~~~~~h~~~I~~v~~sp~--~ 264 (303)
..+..+.+|..... ...|+|++.+|++|+.|++|++||..++ +.+..+.+|..+|++++|+|+ +
T Consensus 144 ------~~~~~~~~h~~~v~------~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 211 (330)
T 2hes_X 144 ------ECISVLQEHSQDVK------HVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGV 211 (330)
T ss_dssp ------EEEEEECCCSSCEE------EEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSS
T ss_pred ------EEEEEeccCCCceE------EEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCe
Confidence 01223333432211 2346788999999999999999998776 567888999999999999999 6
Q ss_pred CeEEEEeCCCCEEEeecCC
Q 022074 265 PMLVSSSWDGDVVRWEFPG 283 (303)
Q Consensus 265 ~~las~s~Dg~i~~Wd~~~ 283 (303)
.+|+|++.|+++++||+..
T Consensus 212 ~~l~s~s~D~~v~iw~~~~ 230 (330)
T 2hes_X 212 FRLCSGSDDSTVRVWKYMG 230 (330)
T ss_dssp CEEEEEETTSCEEEEEEEE
T ss_pred eEEEEEeCCCeEEEEEecC
Confidence 7899999999999999854
No 29
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=7.8e-32 Score=241.69 Aligned_cols=218 Identities=11% Similarity=0.046 Sum_probs=161.6
Q ss_pred CCcccceEEEEEcCCCCEEEE--eeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCcc
Q 022074 36 GGYSFGIFSLKFSTDGRELVA--GSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRC 113 (303)
Q Consensus 36 ~~~~~~v~~l~~s~~g~~l~s--gs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~ 113 (303)
..++..+.+++|||||+++++ ++.|++|+|||+++++....+ .|...|.+++|+| +++++++++.++.+.+|+..
T Consensus 130 ~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~-~~~~~V~~v~fsp-dg~~l~s~s~~~~~~~~~~~- 206 (365)
T 4h5i_A 130 TNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEI-ETRGEVKDLHFST-DGKVVAYITGSSLEVISTVT- 206 (365)
T ss_dssp CCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEE-ECSSCCCEEEECT-TSSEEEEECSSCEEEEETTT-
T ss_pred CCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEe-CCCCceEEEEEcc-CCceEEeccceeEEEEEecc-
Confidence 456677999999999998765 457999999999999877655 5778899999975 58899999866555554432
Q ss_pred ccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCC----cEEEEEcccccCCcccccCccceeeeceeeeCCCCCccc
Q 022074 114 LNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQ----AIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDL 189 (303)
Q Consensus 114 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~----~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (303)
. .........+|...|.+++|+|++.++++++.|+ .+++||+........
T Consensus 207 ~--~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~------------------------ 260 (365)
T 4h5i_A 207 G--SCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVL------------------------ 260 (365)
T ss_dssp C--CEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEE------------------------
T ss_pred C--cceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecce------------------------
Confidence 1 1111223456888999999999999999999887 578888753211000
Q ss_pred cCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEe-ecCCCCeEEEEECCCCCeEE
Q 022074 190 KHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAAL-KYHTSPVRDCSWHPSQPMLV 268 (303)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~-~~h~~~I~~v~~sp~~~~la 268 (303)
....+.++.... .+..|+|++++||+|+.|++|+|||+.+++++..+ ++|..+|++++||||+++||
T Consensus 261 ------~~~~~~~~~~~V------~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~la 328 (365)
T 4h5i_A 261 ------RSKQVTNRFKGI------TSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVA 328 (365)
T ss_dssp ------EEEEEESSCSCE------EEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEE
T ss_pred ------eeeeecCCCCCe------EeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEE
Confidence 011122222111 23457899999999999999999999999998875 78999999999999999999
Q ss_pred EEeCCCCEEEeecCCCCccCCCCccc
Q 022074 269 SSSWDGDVVRWEFPGNGEAAPPLNKK 294 (303)
Q Consensus 269 s~s~Dg~i~~Wd~~~~~~~~~~~~~~ 294 (303)
|+|.|++|++||++.+......+.++
T Consensus 329 S~S~D~tvrvw~ip~~~~~~~s~~~~ 354 (365)
T 4h5i_A 329 SVSAANTIHIIKLPLNYANYTSMKQK 354 (365)
T ss_dssp EEETTSEEEEEECCTTTTC-------
T ss_pred EEeCCCeEEEEEcCCCCcCccCcccc
Confidence 99999999999998776655555444
No 30
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=6.8e-31 Score=229.53 Aligned_cols=205 Identities=22% Similarity=0.398 Sum_probs=173.7
Q ss_pred CCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccc
Q 022074 35 DGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCL 114 (303)
Q Consensus 35 ~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~ 114 (303)
..||..+|.+++|+|+|++|++|+.||+|++||+.+++....+.+|...|.+++|++ ++++|++++.|++|++||++
T Consensus 19 ~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~i~vwd~~-- 95 (312)
T 4ery_A 19 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVS-- 95 (312)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETT--
T ss_pred EcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcC-CCCEEEEECCCCEEEEEECC--
Confidence 369999999999999999999999999999999999988888889999999999975 57899999999999999986
Q ss_pred cCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCC
Q 022074 115 NVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCD 194 (303)
Q Consensus 115 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (303)
..+....+.+|...|.++.+++++++|++++.|+.|++||++....
T Consensus 96 --~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~-------------------------------- 141 (312)
T 4ery_A 96 --SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC-------------------------------- 141 (312)
T ss_dssp --TCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCE--------------------------------
T ss_pred --CCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEE--------------------------------
Confidence 3445667889999999999999999999999999999999874321
Q ss_pred CcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEe-ecCCCCeEEEEECCCCCeEEEEeCC
Q 022074 195 QSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAAL-KYHTSPVRDCSWHPSQPMLVSSSWD 273 (303)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~-~~h~~~I~~v~~sp~~~~las~s~D 273 (303)
+..+.+|.... ....|++++++|++|+.||.|++||+.+++.+..+ ..+..++..++|+|++++|++++.|
T Consensus 142 --~~~~~~~~~~v------~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 213 (312)
T 4ery_A 142 --LKTLPAHSDPV------SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD 213 (312)
T ss_dssp --EEEECCCSSCE------EEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETT
T ss_pred --EEEecCCCCcE------EEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCC
Confidence 11111221111 12346788999999999999999999999887665 4566789999999999999999999
Q ss_pred CCEEEeecCCC
Q 022074 274 GDVVRWEFPGN 284 (303)
Q Consensus 274 g~i~~Wd~~~~ 284 (303)
+.+++||+...
T Consensus 214 ~~i~iwd~~~~ 224 (312)
T 4ery_A 214 NTLKLWDYSKG 224 (312)
T ss_dssp TEEEEEETTTT
T ss_pred CeEEEEECCCC
Confidence 99999998653
No 31
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=4.5e-31 Score=234.30 Aligned_cols=208 Identities=22% Similarity=0.307 Sum_probs=164.2
Q ss_pred CCCcccceEEEEE-----cC-CCCEEEEeeCCCeEEEEECCCC-------ceEEEEecccCCeEEEEEccCCCcEEEEec
Q 022074 35 DGGYSFGIFSLKF-----ST-DGRELVAGSSDDCIYVYDLEAN-------KLSLRILAHTSDVNTVCFGDESGHLIYSGS 101 (303)
Q Consensus 35 ~~~~~~~v~~l~~-----s~-~g~~l~sgs~Dg~v~lwd~~~~-------~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s 101 (303)
..||+.+|.+++| ++ ++++|++|+.|++|+|||+.++ .....+.+|...|.+++|++ ++.++++|+
T Consensus 17 l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~-~~~~l~s~s 95 (343)
T 2xzm_R 17 LEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQ-ENCFAISSS 95 (343)
T ss_dssp EECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECS-STTEEEEEE
T ss_pred eccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECC-CCCEEEEEc
Confidence 3699999999999 76 8999999999999999999753 23456788999999999975 578999999
Q ss_pred CCCeEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeee
Q 022074 102 DDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMD 181 (303)
Q Consensus 102 ~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~ 181 (303)
.|++|++||++ .++....+.+|...|.+++|+|++++|++++.|++|++||++......... .
T Consensus 96 ~D~~v~lwd~~----~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~--~----------- 158 (343)
T 2xzm_R 96 WDKTLRLWDLR----TGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAE--K----------- 158 (343)
T ss_dssp TTSEEEEEETT----SSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCT--T-----------
T ss_pred CCCcEEEEECC----CCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeec--c-----------
Confidence 99999999986 344566788999999999999999999999999999999986311000000 0
Q ss_pred CCCCCccccCCCCCcceEEecccceeeeEEEeeee------eeeCCCeEEEEEeCCCeEEEEECCCCeEEEEeecCCCCe
Q 022074 182 YPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSP------VYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPV 255 (303)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~h~~~I 255 (303)
.+|...... ..++| ...+.+.+|++++.||.|++||. +++....+.+|..+|
T Consensus 159 -------------------~~~~~~v~~--~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v 216 (343)
T 2xzm_R 159 -------------------ENHSDWVSC--VRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNV 216 (343)
T ss_dssp -------------------TSCSSCEEE--EEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCE
T ss_pred -------------------cCCCceeee--eeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccc
Confidence 000000000 11111 12234578999999999999994 567777889999999
Q ss_pred EEEEECCCCCeEEEEeCCCCEEEeecC
Q 022074 256 RDCSWHPSQPMLVSSSWDGDVVRWEFP 282 (303)
Q Consensus 256 ~~v~~sp~~~~las~s~Dg~i~~Wd~~ 282 (303)
++++|+|++++|++++.|+.|++||+.
T Consensus 217 ~~~~~s~~g~~l~sgs~dg~v~iwd~~ 243 (343)
T 2xzm_R 217 NHLSISPNGKYIATGGKDKKLLIWDIL 243 (343)
T ss_dssp EEEEECTTSSEEEEEETTCEEEEEESS
T ss_pred eEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 999999999999999999999999984
No 32
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2e-31 Score=254.49 Aligned_cols=266 Identities=13% Similarity=0.182 Sum_probs=178.5
Q ss_pred cCchhhccccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEeeCC----CeEEEEECCCCceEEEEecccCCeEE
Q 022074 11 GSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD----DCIYVYDLEANKLSLRILAHTSDVNT 86 (303)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~D----g~v~lwd~~~~~~~~~~~~h~~~v~~ 86 (303)
-+|+.|..+.||+.-+|.........+|+.+|.+++|+|+|+.|++++.+ ++|++||. +.....+.+|...|.+
T Consensus 75 asg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~--~~~~~~l~gh~~~v~~ 152 (611)
T 1nr0_A 75 ASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDT--GTSNGNLTGQARAMNS 152 (611)
T ss_dssp EEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTT--CCBCBCCCCCSSCEEE
T ss_pred EEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeC--CCCcceecCCCCCceE
Confidence 45677888999987555433223447899999999999999999998865 47888874 5455567899999999
Q ss_pred EEEccCCCcEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCccc
Q 022074 87 VCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASC 166 (303)
Q Consensus 87 l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~ 166 (303)
++|+|+....|++|+.|++|++||.+ ..+....+.+|...|.+++|+|++++|++++.|++|++||++........
T Consensus 153 v~f~p~~~~~l~s~s~D~~v~lwd~~----~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~ 228 (611)
T 1nr0_A 153 VDFKPSRPFRIISGSDDNTVAIFEGP----PFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVF 228 (611)
T ss_dssp EEECSSSSCEEEEEETTSCEEEEETT----TBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEC
T ss_pred EEECCCCCeEEEEEeCCCeEEEEECC----CCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeee
Confidence 99987655579999999999999965 33445678899999999999999999999999999999998653321111
Q ss_pred ccC---ccceeeeceeeeCCCCCccccCC-CCCcceEEeccccee-eeEEE-------eeeeeeeCCCeEEEEEeCCCeE
Q 022074 167 NLG---FRSYEWDYRWMDYPPQARDLKHP-CDQSVATYKGHSVLR-TLIRC-------HFSPVYSTGQKYIYTGSHDSCV 234 (303)
Q Consensus 167 ~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~-------~~~~~~s~~~~~latg~~dg~i 234 (303)
... .......+..+.+.|+...+... .+..+..++-..... ..+.. .....+ +++.+++++.|+.+
T Consensus 229 ~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~s~s~d~~i 306 (611)
T 1nr0_A 229 EDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIW--TKQALVSISANGFI 306 (611)
T ss_dssp BCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEE--CSSCEEEEETTCCE
T ss_pred ccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEE--cCCEEEEEeCCCcE
Confidence 000 00011112223333333322221 122233333211100 00000 000111 34445555555555
Q ss_pred EEEECCCCeEEEEeecCCCCeEEEEECCCCCeEEEEeCCCCEEEeecCCC
Q 022074 235 YVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 235 ~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~~ 284 (303)
++||..+++....+.+|..+|++++|+|++++|++++.|+++++||+...
T Consensus 307 ~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~ 356 (611)
T 1nr0_A 307 NFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTG 356 (611)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred EEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCC
Confidence 55555555555566789999999999999999999999999999998754
No 33
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.7e-31 Score=240.44 Aligned_cols=214 Identities=20% Similarity=0.283 Sum_probs=170.5
Q ss_pred CCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccc
Q 022074 35 DGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCL 114 (303)
Q Consensus 35 ~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~ 114 (303)
..||+.+|.+++|+|++++|++|+.||+|+|||+.+++....+..|...|.+++|+| ++++|++|+.|++|++||+...
T Consensus 62 l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~-~g~~las~~~d~~v~iw~~~~~ 140 (380)
T 3iz6_a 62 LQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAP-NGQSVACGGLDSACSIFNLSSQ 140 (380)
T ss_dssp ECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECT-TSSEEEECCSSSCCEEEECCCC
T ss_pred ccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECC-CCCEEEEeeCCCcEEEEECCCC
Confidence 479999999999999999999999999999999999998888999999999999975 5889999999999999998532
Q ss_pred cC---CCccceeecccccCeEEEEeCCC-CCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCcccc
Q 022074 115 NV---KGKPAGVLMGHLEGITFIDSRGD-GRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLK 190 (303)
Q Consensus 115 ~~---~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (303)
.. .......+.+|...+.++.+.++ +..|++++.|++|++||++.......... .+
T Consensus 141 ~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~------------~~-------- 200 (380)
T 3iz6_a 141 ADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGS------------EF-------- 200 (380)
T ss_dssp SSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECC------------CS--------
T ss_pred ccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeec------------cc--------
Confidence 11 12234567899999999999886 45799999999999999875322110000 00
Q ss_pred CCCCCcceEEecccceeeeEEEeeeeeee-CCCeEEEEEeCCCeEEEEECC-CCeEEEEeecCCCCeEEEEECCCCCeEE
Q 022074 191 HPCDQSVATYKGHSVLRTLIRCHFSPVYS-TGQKYIYTGSHDSCVYVYDLV-SGEQVAALKYHTSPVRDCSWHPSQPMLV 268 (303)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-~~~~~latg~~dg~i~iwd~~-~~~~~~~~~~h~~~I~~v~~sp~~~~la 268 (303)
..+|... +.. ..++ +++.+|++|+.|++|++||++ .++.+..+.+|..+|++++|+|++++|+
T Consensus 201 ---------~~~h~~~--v~~----~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~ 265 (380)
T 3iz6_a 201 ---------PSGHTAD--VLS----LSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFG 265 (380)
T ss_dssp ---------SSSCCSC--EEE----EEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEE
T ss_pred ---------CCCCccC--eEE----EEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEE
Confidence 0111111 111 1122 367899999999999999997 4466788899999999999999999999
Q ss_pred EEeCCCCEEEeecCCC
Q 022074 269 SSSWDGDVVRWEFPGN 284 (303)
Q Consensus 269 s~s~Dg~i~~Wd~~~~ 284 (303)
|++.|+++++||+...
T Consensus 266 s~s~D~~i~lwd~~~~ 281 (380)
T 3iz6_a 266 TGSDDGTCRLFDMRTG 281 (380)
T ss_dssp EECSSSCEEEEETTTT
T ss_pred EEcCCCeEEEEECCCC
Confidence 9999999999998753
No 34
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=8.3e-31 Score=247.11 Aligned_cols=252 Identities=22% Similarity=0.385 Sum_probs=189.3
Q ss_pred chhhccccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccC
Q 022074 13 GTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDE 92 (303)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~ 92 (303)
++.|..+.+|+. ++.+. ....+|..+|.+++|+|+|+++++|+.|++|++||. +++....+.+|...|.+++|+|
T Consensus 321 ~~~d~~i~~w~~-~~~~~--~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~- 395 (577)
T 2ymu_A 321 ASDDKTVKLWNR-NGQHL--QTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSP- 395 (577)
T ss_dssp EETTSCEEEEET-TSCEE--EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECT-
T ss_pred EeCCCeEEEEeC-CCCee--EEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECC-
Confidence 455666777774 33322 234789999999999999999999999999999996 4556677889999999999975
Q ss_pred CCcEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccc
Q 022074 93 SGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRS 172 (303)
Q Consensus 93 ~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~ 172 (303)
++++|++++.|++|++||.. .+....+.+|...|.+++++|++++|++++.|++|++||+.... ... +..
T Consensus 396 dg~~l~~~~~d~~v~~~~~~-----~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~-~~~----~~~ 465 (577)
T 2ymu_A 396 DGQTIASASDDKTVKLWNRN-----GQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQL-LQT----LTG 465 (577)
T ss_dssp TSSCEEEEETTSEEEEECTT-----CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCE-EEE----EEC
T ss_pred CCCEEEEEeCCCEEEEEeCC-----CCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCCCE-EEE----EcC
Confidence 57899999999999999953 34566788999999999999999999999999999999964311 100 111
Q ss_pred eeeeceeeeCCCCCccccCCC-CCcceEEecccceeeeEEEe----eeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEE
Q 022074 173 YEWDYRWMDYPPQARDLKHPC-DQSVATYKGHSVLRTLIRCH----FSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAA 247 (303)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~ 247 (303)
....+..+.+.|+.+.+.... +..+..++........+..| ....|+|++++|++++.||.|++||. +++.+..
T Consensus 466 ~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~ 544 (577)
T 2ymu_A 466 HSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQT 544 (577)
T ss_dssp CSSCEEEEEECTTSCEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEE
T ss_pred CCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEE
Confidence 122233445555555443322 22233332111111111111 23458899999999999999999996 6788899
Q ss_pred eecCCCCeEEEEECCCCCeEEEEeCCCCEEEee
Q 022074 248 LKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWE 280 (303)
Q Consensus 248 ~~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd 280 (303)
+.+|..+|++++|+||+++|+|++.|++|++||
T Consensus 545 ~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 545 LTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 999999999999999999999999999999997
No 35
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=5.9e-31 Score=233.55 Aligned_cols=262 Identities=15% Similarity=0.216 Sum_probs=186.6
Q ss_pred CchhhccccccccccCcCc----c-cccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEE
Q 022074 12 SGTMESLANVTEIHDGLDF----S-AADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNT 86 (303)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~ 86 (303)
+|+.|..+.||+.-++... . .....||..+|.+++|+|++.++++|+.|++|+|||+.+++....+.+|...|.+
T Consensus 44 sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~ 123 (343)
T 2xzm_R 44 SGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYS 123 (343)
T ss_dssp EEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEE
T ss_pred EEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEE
Confidence 6778888999988554321 0 1234799999999999999999999999999999999999988889999999999
Q ss_pred EEEccCCCcEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCCCC----------CEEEEEeCCCcEEEEE
Q 022074 87 VCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDG----------RYLISNGKDQAIKLWD 156 (303)
Q Consensus 87 l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~----------~~l~s~~~D~~v~lWd 156 (303)
++|+| ++++|++++.|++|++||+... .........+|...|.++.++|++ .+|++++.|+.|++||
T Consensus 124 v~~sp-~~~~l~s~~~d~~i~~wd~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd 200 (343)
T 2xzm_R 124 VAFSP-DNRQILSAGAEREIKLWNILGE--CKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN 200 (343)
T ss_dssp EEECS-STTEEEEEETTSCEEEEESSSC--EEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE
T ss_pred EEECC-CCCEEEEEcCCCEEEEEeccCC--ceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEc
Confidence 99975 5789999999999999997511 001111223688899999999886 7899999999999999
Q ss_pred cccccCCcccccCccceeeeceeeeCCCCCccccCCC-CCcceEEecccc--eeeeE---EEeeeeeeeCCCeEEEEEeC
Q 022074 157 IRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPC-DQSVATYKGHSV--LRTLI---RCHFSPVYSTGQKYIYTGSH 230 (303)
Q Consensus 157 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~---~~~~~~~~s~~~~~latg~~ 230 (303)
.+... . ..+......+..+.+.|+.+.+.... +..+..++-... ..... .......|+|++++++ ++.
T Consensus 201 ~~~~~-~----~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la-~~~ 274 (343)
T 2xzm_R 201 TNFQI-R----YTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVA-VGT 274 (343)
T ss_dssp TTTEE-E----EEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEE-EEE
T ss_pred CCCce-e----EEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEE-EEC
Confidence 54211 0 00111112223344555555443322 333333332100 00000 0112345788888776 456
Q ss_pred CCeEEEEECCCCeEEE--Eee-----------cCCCCeEEEEECCCCCeEEEEeCCCCEEEeecC
Q 022074 231 DSCVYVYDLVSGEQVA--ALK-----------YHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFP 282 (303)
Q Consensus 231 dg~i~iwd~~~~~~~~--~~~-----------~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~ 282 (303)
|+.|++||+.+++... .+. +|..+|++++|+|++++|++|+.||+|++|++.
T Consensus 275 d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~ 339 (343)
T 2xzm_R 275 DQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFE 339 (343)
T ss_dssp SSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEE
T ss_pred CCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEE
Confidence 8889999998765432 443 688899999999999999999999999999975
No 36
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-31 Score=250.36 Aligned_cols=230 Identities=13% Similarity=0.035 Sum_probs=176.0
Q ss_pred cCchhhccccccccccCcCcc--cccCCCcccceEEEEEcCC------CCEEEEeeCCCeEEEEECCCCce---------
Q 022074 11 GSGTMESLANVTEIHDGLDFS--AADDGGYSFGIFSLKFSTD------GRELVAGSSDDCIYVYDLEANKL--------- 73 (303)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~l~~s~~------g~~l~sgs~Dg~v~lwd~~~~~~--------- 73 (303)
-+|+.|..+.||+.-+|.... .....+|...|.+++|+|+ +..|++++.||+|+|||+.++..
T Consensus 177 aS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~ 256 (524)
T 2j04_B 177 DKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCE 256 (524)
T ss_dssp -----CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCC
T ss_pred ccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeec
Confidence 457888899999975443210 0123567889999999996 57999999999999999987632
Q ss_pred --EEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEE--EeCCCC-CEEEEEeC
Q 022074 74 --SLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFI--DSRGDG-RYLISNGK 148 (303)
Q Consensus 74 --~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~--~~~~~~-~~l~s~~~ 148 (303)
...+.+|...|.+++|+++ ..|++|+.||+|++||++.. ..+...+.+|...|.++ .+++++ .+|+|++.
T Consensus 257 ~p~~~l~~h~~~v~sv~~s~~--~~lasgs~DgtV~lWD~~~~---~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~ 331 (524)
T 2j04_B 257 KPSLTLSLADSLITTFDFLSP--TTVVCGFKNGFVAEFDLTDP---EVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAV 331 (524)
T ss_dssp SCSEEECCTTTCEEEEEESSS--SEEEEEETTSEEEEEETTBC---SSCSEEEECSSSCEEEEEEECCTTSCCEEEEEET
T ss_pred CceEEEEcCCCCEEEEEecCC--CeEEEEeCCCEEEEEECCCC---CCceEEeecccccEEEEEEEcCCCCCeEEEEecc
Confidence 1356789999999999753 58999999999999998632 13345578899999998 567877 89999999
Q ss_pred CCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEE
Q 022074 149 DQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTG 228 (303)
Q Consensus 149 D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg 228 (303)
|++|+|||++..... ..+.++..... ..+..|+|+++.++++
T Consensus 332 D~tvklWD~~~~~~~----------------------------------~~~~~~~~~~~----v~~v~fsp~~~~l~s~ 373 (524)
T 2j04_B 332 DGYFYIFNPKDIATT----------------------------------KTTVSRFRGSN----LVPVVYCPQIYSYIYS 373 (524)
T ss_dssp TSEEEEECGGGHHHH----------------------------------CEEEEECSCCS----CCCEEEETTTTEEEEE
T ss_pred CCeEEEEECCCCCcc----------------------------------cccccccccCc----ccceEeCCCcCeEEEe
Confidence 999999999753211 11111110000 0123478889999999
Q ss_pred eCCCeEEEEECCCCeEEEEeecCCCCeEEEEECCCCCeEEEEeCCCCEEEeecCC
Q 022074 229 SHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPG 283 (303)
Q Consensus 229 ~~dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~ 283 (303)
+.|++|++||++++..+..+.+|..+|++|+|||++++|+||+.|+++++||+..
T Consensus 374 ~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 374 DGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp CSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCS
T ss_pred CCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechH
Confidence 9999999999999988788889999999999999999999999999999999753
No 37
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.3e-30 Score=248.83 Aligned_cols=218 Identities=16% Similarity=0.240 Sum_probs=175.5
Q ss_pred cccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCc--eEEEEecccCCeEEEEEccCCCc
Q 022074 18 LANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANK--LSLRILAHTSDVNTVCFGDESGH 95 (303)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~--~~~~~~~h~~~v~~l~~~~~~~~ 95 (303)
.+.+|+.-+|... ....||+.+|.+++|+|+|++|++|+.|++|+|||+.+++ ....+..|.+.|.+++|+| +++
T Consensus 40 ~v~l~~~~~~~~~--~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~-dg~ 116 (611)
T 1nr0_A 40 SVYTVPVGSLTDT--EIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDS-ESK 116 (611)
T ss_dssp EEEEEETTCSSCC--EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECT-TSC
T ss_pred EEEEecCCCcccC--eEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECC-CCC
Confidence 5566766444322 2447999999999999999999999999999999997543 3446778999999999976 477
Q ss_pred EEEEecCC----CeEEEEcCccccCCCccceeecccccCeEEEEeCCCCC-EEEEEeCCCcEEEEEcccccCCcccccCc
Q 022074 96 LIYSGSDD----NLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGR-YLISNGKDQAIKLWDIRKMSSNASCNLGF 170 (303)
Q Consensus 96 ~l~s~s~d----g~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~D~~v~lWdl~~~~~~~~~~~~~ 170 (303)
.|++++.+ +.|++||.. .....+.+|...|.+++|+|++. .|++++.|++|++||.+..+
T Consensus 117 ~l~~~~~~~~~~~~v~~wd~~------~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~--------- 181 (611)
T 1nr0_A 117 RIAAVGEGRERFGHVFLFDTG------TSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK--------- 181 (611)
T ss_dssp EEEEEECCSSCSEEEEETTTC------CBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBE---------
T ss_pred EEEEEECCCCceeEEEEeeCC------CCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCe---------
Confidence 88887764 489999842 23456789999999999999987 59999999999999975311
Q ss_pred cceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEee-
Q 022074 171 RSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALK- 249 (303)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~- 249 (303)
....+.+|.... .+..|+|++++|++|+.|++|++||..+++.+..+.
T Consensus 182 -------------------------~~~~l~~H~~~V------~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~ 230 (611)
T 1nr0_A 182 -------------------------FKSTFGEHTKFV------HSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFED 230 (611)
T ss_dssp -------------------------EEEEECCCSSCE------EEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBC
T ss_pred -------------------------EeeeeccccCce------EEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeecc
Confidence 122334443221 123478899999999999999999999999888884
Q ss_pred ------cCCCCeEEEEECCCCCeEEEEeCCCCEEEeecCCC
Q 022074 250 ------YHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 250 ------~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~~ 284 (303)
+|.++|++++|+|++++|+|++.|+++++||+...
T Consensus 231 ~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~ 271 (611)
T 1nr0_A 231 DSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATL 271 (611)
T ss_dssp TTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred ccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCC
Confidence 79999999999999999999999999999998643
No 38
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=7.1e-31 Score=234.71 Aligned_cols=244 Identities=16% Similarity=0.179 Sum_probs=166.6
Q ss_pred CCCcccceEEEEEcCCCCEEEEeeC------CCeEEEEECCCCce----EEEEecccCCeEEEEEccCCCcEEEEecCCC
Q 022074 35 DGGYSFGIFSLKFSTDGRELVAGSS------DDCIYVYDLEANKL----SLRILAHTSDVNTVCFGDESGHLIYSGSDDN 104 (303)
Q Consensus 35 ~~~~~~~v~~l~~s~~g~~l~sgs~------Dg~v~lwd~~~~~~----~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg 104 (303)
+.+|+..|.+++|||||++|++||. |++|++|+..++.. .....+|...|.+++|+|+ + .+++++.||
T Consensus 38 p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d-~-~~l~~s~dg 115 (357)
T 4g56_B 38 PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSE-K-GILVASDSG 115 (357)
T ss_dssp --CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETT-T-EEEEEETTS
T ss_pred cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCC-C-CEEEEECCC
Confidence 4689999999999999999999996 78899999877642 2345678899999999864 4 566788899
Q ss_pred eEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCC
Q 022074 105 LCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPP 184 (303)
Q Consensus 105 ~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (303)
+|++||+..............+|...|.+++|+|++++|++++.|++|++||++......... .....+..+.+.+
T Consensus 116 ~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~----~h~~~v~~v~~s~ 191 (357)
T 4g56_B 116 AVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYN----AHSSEVNCVAACP 191 (357)
T ss_dssp CEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEEC----CCSSCEEEEEECT
T ss_pred EEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEc----CCCCCEEEEEEcc
Confidence 999999864322222223455899999999999999999999999999999987643322211 1111112223333
Q ss_pred CCcc-c-cCCCCCcceEEecccc--eeee-----EEEeeeeeeeCC-CeEEEEEeCCCeEEEEECCCCeEEEEeecCCCC
Q 022074 185 QARD-L-KHPCDQSVATYKGHSV--LRTL-----IRCHFSPVYSTG-QKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSP 254 (303)
Q Consensus 185 ~~~~-~-~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~s~~-~~~latg~~dg~i~iwd~~~~~~~~~~~~h~~~ 254 (303)
.... + ....+..+..++-... .... .....+..|+|+ +.+|++|+.|+.|++||+++++.+..+.+|..+
T Consensus 192 ~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~ 271 (357)
T 4g56_B 192 GKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQN 271 (357)
T ss_dssp TCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSC
T ss_pred CCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEecccee
Confidence 2221 1 1111222222221100 0000 001122346665 578999999999999999999999999999999
Q ss_pred eEEEEECCCC-CeEEEEeCCCCEEEeecCCC
Q 022074 255 VRDCSWHPSQ-PMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 255 I~~v~~sp~~-~~las~s~Dg~i~~Wd~~~~ 284 (303)
|++++|+|++ ++|||++.|++|++||+...
T Consensus 272 v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~ 302 (357)
T 4g56_B 272 ITGLAYSYHSSPFLASISEDCTVAVLDADFS 302 (357)
T ss_dssp EEEEEECSSSSCCEEEEETTSCEEEECTTSC
T ss_pred EEEEEEcCCCCCEEEEEeCCCEEEEEECCCC
Confidence 9999999997 58999999999999998654
No 39
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.98 E-value=8.5e-31 Score=236.81 Aligned_cols=272 Identities=12% Similarity=0.189 Sum_probs=196.5
Q ss_pred hhhccccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCC----CceEEEEecccCCeEEEEE
Q 022074 14 TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEA----NKLSLRILAHTSDVNTVCF 89 (303)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~----~~~~~~~~~h~~~v~~l~~ 89 (303)
+.|..+.||+.-++......-..+|..+|.+++|+|++++|++|+.||.|++||+.+ ......+..|...|.+++|
T Consensus 42 ~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~ 121 (416)
T 2pm9_A 42 STDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKF 121 (416)
T ss_dssp CCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEE
T ss_pred CCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEE
Confidence 667889999987765432333457999999999999999999999999999999987 3466678889999999999
Q ss_pred ccCCCcEEEEecCCCeEEEEcCccccC-----CCccceeecccccCeEEEEeCCC-CCEEEEEeCCCcEEEEEcccccCC
Q 022074 90 GDESGHLIYSGSDDNLCKVWDRRCLNV-----KGKPAGVLMGHLEGITFIDSRGD-GRYLISNGKDQAIKLWDIRKMSSN 163 (303)
Q Consensus 90 ~~~~~~~l~s~s~dg~v~lWd~~~~~~-----~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~D~~v~lWdl~~~~~~ 163 (303)
+++.+++|++++.|++|++||++.... .......+.+|...|.+++++++ +.+|++++.|+.|++||++.....
T Consensus 122 ~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~ 201 (416)
T 2pm9_A 122 NAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEV 201 (416)
T ss_dssp CSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEE
T ss_pred cCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcc
Confidence 876578999999999999999864321 01112234678899999999998 789999999999999999864332
Q ss_pred cccccCc--cceeeeceeeeCCCCCc-cccCCC-CC---cceEEecccc--eeeeEE-----EeeeeeeeC-CCeEEEEE
Q 022074 164 ASCNLGF--RSYEWDYRWMDYPPQAR-DLKHPC-DQ---SVATYKGHSV--LRTLIR-----CHFSPVYST-GQKYIYTG 228 (303)
Q Consensus 164 ~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~-~~---~~~~~~~~~~--~~~~~~-----~~~~~~~s~-~~~~latg 228 (303)
....... ......+..+.+.+... .+.... +. .+..++-... ...... ......|+| ++++|+++
T Consensus 202 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~ 281 (416)
T 2pm9_A 202 IHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSS 281 (416)
T ss_dssp EEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEE
T ss_pred eEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEE
Confidence 2221110 00011222333444321 121111 11 2333221110 000011 112345777 89999999
Q ss_pred eCCCeEEEEECCCCeEEEEeecCCCCeEEEEECCCC-CeEEEEeCCCCEEEeecCCCC
Q 022074 229 SHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQ-PMLVSSSWDGDVVRWEFPGNG 285 (303)
Q Consensus 229 ~~dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~-~~las~s~Dg~i~~Wd~~~~~ 285 (303)
+.||.|++||+.+++.+..+..|..+|++++|+|++ .+|++++.|+.|++|++....
T Consensus 282 ~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 282 GRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp ESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCC
T ss_pred eCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCC
Confidence 999999999999999999999999999999999999 799999999999999987553
No 40
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.98 E-value=2e-30 Score=234.89 Aligned_cols=264 Identities=20% Similarity=0.284 Sum_probs=195.1
Q ss_pred chhhccccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccC
Q 022074 13 GTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDE 92 (303)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~ 92 (303)
++.|..+.||+.-+|... .....+|...|.+++|+|++++|++|+.||.|++||+.+++....+..|...|.+++|+
T Consensus 109 ~~~d~~v~lw~~~~~~~~-~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~-- 185 (401)
T 4aez_A 109 VALERNVYVWNADSGSVS-ALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWN-- 185 (401)
T ss_dssp EEETTEEEEEETTTCCEE-EEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEE--
T ss_pred EECCCeEEEeeCCCCcEe-EeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEEC--
Confidence 345677889988776643 33335699999999999999999999999999999999999888888999999999994
Q ss_pred CCcEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccc
Q 022074 93 SGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRS 172 (303)
Q Consensus 93 ~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~ 172 (303)
++.+++++.||.|++||++. .......+.+|...|.++++++++++|++++.|+.|++||++......... .
T Consensus 186 -~~~l~~~~~dg~i~i~d~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~----~ 257 (401)
T 4aez_A 186 -RHVLSSGSRSGAIHHHDVRI---ANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKT----N 257 (401)
T ss_dssp -TTEEEEEETTSEEEEEETTS---SSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEEC----C
T ss_pred -CCEEEEEcCCCCEEEEeccc---CcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEec----C
Confidence 46999999999999999862 234466778899999999999999999999999999999998643222111 1
Q ss_pred eeeeceeeeCCCCCccccCC----CCCcceEEeccccee-eeEE---EeeeeeeeCCCeEEEE--EeCCCeEEEEECCCC
Q 022074 173 YEWDYRWMDYPPQARDLKHP----CDQSVATYKGHSVLR-TLIR---CHFSPVYSTGQKYIYT--GSHDSCVYVYDLVSG 242 (303)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~---~~~~~~~s~~~~~lat--g~~dg~i~iwd~~~~ 242 (303)
....+..+.+.+....+... .+..+..++-..... .... ......|+++++++++ |+.||.|++||+.++
T Consensus 258 ~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~ 337 (401)
T 4aez_A 258 HNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSS 337 (401)
T ss_dssp CSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETT
T ss_pred CcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCc
Confidence 11122334444433322221 233344443221110 0010 1223457889999999 448999999999987
Q ss_pred eEE--EEeecCCCCeEEEEECCCCCeEEEEeCCCCEEEeecCCCCcc
Q 022074 243 EQV--AALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPGNGEA 287 (303)
Q Consensus 243 ~~~--~~~~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~~~~~ 287 (303)
+.. ..+.+|..+|.+++|+|++++|++++.||.|++|++......
T Consensus 338 ~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~ 384 (401)
T 4aez_A 338 GLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHV 384 (401)
T ss_dssp EEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC----
T ss_pred cceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCccc
Confidence 654 446789999999999999999999999999999999765433
No 41
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.98 E-value=3.2e-30 Score=233.18 Aligned_cols=200 Identities=28% Similarity=0.454 Sum_probs=162.3
Q ss_pred CcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccC------------------CeEEEEEccCCCcEEE
Q 022074 37 GYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTS------------------DVNTVCFGDESGHLIY 98 (303)
Q Consensus 37 ~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~------------------~v~~l~~~~~~~~~l~ 98 (303)
+|...|.+++|+|+|++|++|+ |++++||++.++.....+..|.. .|.+++|++ ++++|+
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~-dg~~l~ 139 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSP-DGKFLA 139 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECT-TSSEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECC-CCCEEE
Confidence 6999999999999999999976 67899999999987766655432 389999975 588999
Q ss_pred EecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeece
Q 022074 99 SGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYR 178 (303)
Q Consensus 99 s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~ 178 (303)
+|+.|++|++||+. ..+....+.+|...|.+++|++++++|++++.|++|++||++.....
T Consensus 140 s~~~d~~i~iwd~~----~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~--------------- 200 (393)
T 1erj_A 140 TGAEDRLIRIWDIE----NRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCS--------------- 200 (393)
T ss_dssp EEETTSCEEEEETT----TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE---------------
T ss_pred EEcCCCeEEEEECC----CCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeE---------------
Confidence 99999999999975 34456678899999999999999999999999999999998743211
Q ss_pred eeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeC-CCeEEEEEeCCCeEEEEECCCCeEEEEe-------ec
Q 022074 179 WMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYST-GQKYIYTGSHDSCVYVYDLVSGEQVAAL-------KY 250 (303)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~latg~~dg~i~iwd~~~~~~~~~~-------~~ 250 (303)
..+..+.. . ....++| ++++|++|+.|+.|++||..+++.+..+ .+
T Consensus 201 -------------------~~~~~~~~---v----~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~ 254 (393)
T 1erj_A 201 -------------------LTLSIEDG---V----TTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTG 254 (393)
T ss_dssp -------------------EEEECSSC---E----EEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CC
T ss_pred -------------------EEEEcCCC---c----EEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCC
Confidence 00110000 0 1123555 7899999999999999999998877666 57
Q ss_pred CCCCeEEEEECCCCCeEEEEeCCCCEEEeecCC
Q 022074 251 HTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPG 283 (303)
Q Consensus 251 h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~ 283 (303)
|..+|++++|+|++++|++++.|++|++||+..
T Consensus 255 h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~ 287 (393)
T 1erj_A 255 HKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQN 287 (393)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CCCCEEEEEECCCCCEEEEEeCCCEEEEEECCC
Confidence 999999999999999999999999999999864
No 42
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.97 E-value=2.7e-29 Score=220.72 Aligned_cols=120 Identities=22% Similarity=0.383 Sum_probs=101.6
Q ss_pred CCCcccceEEEEEcCC-CCEEEEeeCCCeEEEEECCCCc-----eEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEE
Q 022074 35 DGGYSFGIFSLKFSTD-GRELVAGSSDDCIYVYDLEANK-----LSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKV 108 (303)
Q Consensus 35 ~~~~~~~v~~l~~s~~-g~~l~sgs~Dg~v~lwd~~~~~-----~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~l 108 (303)
..||+.+|.+|+|+|+ +++|++||.|++|+|||+.++. ....+.+|...|.+++|++ ++++|++++.|+.|++
T Consensus 34 L~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~-dg~~l~s~~~d~~i~~ 112 (340)
T 4aow_A 34 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISS-DGQFALSGSWDGTLRL 112 (340)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEE
T ss_pred ECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECC-CCCEEEEEcccccceE
Confidence 4799999999999997 6899999999999999997653 3445778999999999975 5889999999999999
Q ss_pred EcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEccc
Q 022074 109 WDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRK 159 (303)
Q Consensus 109 Wd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~ 159 (303)
|+.. ..........+...+....+.+++.+|++++.|+.+++||++.
T Consensus 113 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~ 159 (340)
T 4aow_A 113 WDLT----TGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLG 159 (340)
T ss_dssp EETT----TTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTS
T ss_pred Eeec----ccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCC
Confidence 9975 2233444556777788888999999999999999999999864
No 43
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.97 E-value=2e-30 Score=229.77 Aligned_cols=259 Identities=18% Similarity=0.273 Sum_probs=182.3
Q ss_pred cccccccccCcCcc---cccCCCcccceEEEEEcCC----CCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEc
Q 022074 18 LANVTEIHDGLDFS---AADDGGYSFGIFSLKFSTD----GRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFG 90 (303)
Q Consensus 18 ~~~~~~~~~~~~~~---~~~~~~~~~~v~~l~~s~~----g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~ 90 (303)
.+.||+.-+|.... ......|...|.+++|+|+ |++|++|+.||+|++||+.+++....+.+|...|.+++|+
T Consensus 45 ~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~ 124 (366)
T 3k26_A 45 RVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFH 124 (366)
T ss_dssp EEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEEC
T ss_pred EEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEEC
Confidence 57788876665322 2223458889999999998 6799999999999999999999888888999999999998
Q ss_pred cCCCcEEEEecCCCeEEEEcCccccCCCccceee---cccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccc
Q 022074 91 DESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVL---MGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCN 167 (303)
Q Consensus 91 ~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~---~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~ 167 (303)
|.++++|++++.||+|++||++. ......+ .+|...|.++++++++++|++++.|+.|++||++.........
T Consensus 125 ~~~~~~l~s~~~dg~i~iwd~~~----~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 200 (366)
T 3k26_A 125 PRDPNLLLSVSKDHALRLWNIQT----DTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIK 200 (366)
T ss_dssp SSCTTEEEEEETTSCEEEEETTT----TEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHH
T ss_pred CCCCCEEEEEeCCCeEEEEEeec----CeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccc
Confidence 75788999999999999999862 3334444 6799999999999999999999999999999998532111000
Q ss_pred c-----------Cccc-------------eeeeceeeeCCCCCcccc-CCCCCcceEEecccce---------------e
Q 022074 168 L-----------GFRS-------------YEWDYRWMDYPPQARDLK-HPCDQSVATYKGHSVL---------------R 207 (303)
Q Consensus 168 ~-----------~~~~-------------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---------------~ 207 (303)
. .... ....+..+.+. ...+. ...+..+..++-.... .
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~ 278 (366)
T 3k26_A 201 ESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTIL 278 (366)
T ss_dssp HHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEE
T ss_pred eeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchhee
Confidence 0 0000 00000000010 00111 1111222222211100 0
Q ss_pred eeEEE----eeeeeeeCC--CeEEEEEeCCCeEEEEECCCCe----EEEEeecC--CCCeEEEEECCCCCeEEEEeCCCC
Q 022074 208 TLIRC----HFSPVYSTG--QKYIYTGSHDSCVYVYDLVSGE----QVAALKYH--TSPVRDCSWHPSQPMLVSSSWDGD 275 (303)
Q Consensus 208 ~~~~~----~~~~~~s~~--~~~latg~~dg~i~iwd~~~~~----~~~~~~~h--~~~I~~v~~sp~~~~las~s~Dg~ 275 (303)
..... .....|+++ +++|++|+.||.|++||+.+++ ....+..| ..+|++++|+|++++|++++.||.
T Consensus 279 ~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~ 358 (366)
T 3k26_A 279 GRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDAS 358 (366)
T ss_dssp EEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSE
T ss_pred ccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCE
Confidence 00011 112346777 9999999999999999999875 44567777 799999999999999999999999
Q ss_pred EEEeecC
Q 022074 276 VVRWEFP 282 (303)
Q Consensus 276 i~~Wd~~ 282 (303)
|++||+.
T Consensus 359 i~iwd~~ 365 (366)
T 3k26_A 359 IWRWDRL 365 (366)
T ss_dssp EEEEEC-
T ss_pred EEEEEec
Confidence 9999974
No 44
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.97 E-value=6e-29 Score=217.84 Aligned_cols=255 Identities=19% Similarity=0.272 Sum_probs=190.3
Q ss_pred hccccccccccCcCcc---cccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCc--eEEEEecccCCeEEEEEc
Q 022074 16 ESLANVTEIHDGLDFS---AADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANK--LSLRILAHTSDVNTVCFG 90 (303)
Q Consensus 16 ~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~--~~~~~~~h~~~v~~l~~~ 90 (303)
|..+.||+.-++.... .....+|..+|.+++|+|+++.+++++.||.|++||+.+++ ....+..|...|.+++|+
T Consensus 71 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~ 150 (337)
T 1gxr_A 71 KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAIS 150 (337)
T ss_dssp BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEEC
T ss_pred CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEEC
Confidence 6788899886665332 11123899999999999999999999999999999999887 455677899999999997
Q ss_pred cCCCcEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCc
Q 022074 91 DESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGF 170 (303)
Q Consensus 91 ~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~ 170 (303)
+ +++.+++++.|+.|++||++ ..+....+.+|...+.++.+++++++|++++.|+.|++||++..........
T Consensus 151 ~-~~~~l~~~~~dg~v~~~d~~----~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~-- 223 (337)
T 1gxr_A 151 P-DSKVCFSCCSDGNIAVWDLH----NQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDF-- 223 (337)
T ss_dssp T-TSSEEEEEETTSCEEEEETT----TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC--
T ss_pred C-CCCEEEEEeCCCcEEEEeCC----CCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecC--
Confidence 5 57899999999999999986 3345667778999999999999999999999999999999986433222111
Q ss_pred cceeeeceeeeCCCCCccccCCC-CCcceEEecccceeeeEE----EeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEE
Q 022074 171 RSYEWDYRWMDYPPQARDLKHPC-DQSVATYKGHSVLRTLIR----CHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQV 245 (303)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~ 245 (303)
...+..+.+.+....+.... +..+..++-......... ......|+|++++|++++.||.|++||+.+++.+
T Consensus 224 ---~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 224 ---TSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI 300 (337)
T ss_dssp ---SSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred ---CCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEE
Confidence 11122233444443332221 223333322211111111 1123457889999999999999999999999877
Q ss_pred EEeecCCCCeEEEEECCCCCeEEEEeCCCCEEEeec
Q 022074 246 AALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEF 281 (303)
Q Consensus 246 ~~~~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~ 281 (303)
... .|..+|++++|+|++++|++++.||.+++|++
T Consensus 301 ~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 301 FQS-KESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp EEE-ECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred EEe-cCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 554 58899999999999999999999999999996
No 45
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.97 E-value=7.2e-31 Score=240.41 Aligned_cols=203 Identities=13% Similarity=0.154 Sum_probs=157.5
Q ss_pred CCcccceEEEEEcC-CCCEEEEeeCCCeEEEEECCCCceE--EEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCc
Q 022074 36 GGYSFGIFSLKFST-DGRELVAGSSDDCIYVYDLEANKLS--LRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRR 112 (303)
Q Consensus 36 ~~~~~~v~~l~~s~-~g~~l~sgs~Dg~v~lwd~~~~~~~--~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~ 112 (303)
.+|+..|.||+|+| +++.||+|+.||+|+|||+.++... ..+.+|.+.|++++|+|.++++|+||+.||+|++||++
T Consensus 116 ~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~ 195 (435)
T 4e54_B 116 APFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFK 195 (435)
T ss_dssp EECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETT
T ss_pred CCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeecc
Confidence 47888999999999 5678999999999999999877543 34568999999999987678899999999999999975
Q ss_pred cccCCCccceeec---ccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccc
Q 022074 113 CLNVKGKPAGVLM---GHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDL 189 (303)
Q Consensus 113 ~~~~~~~~~~~~~---~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (303)
.. ....+. .+...+.++++++++.+|++|+.|+.|++||++...
T Consensus 196 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~---------------------------- 242 (435)
T 4e54_B 196 GN-----ILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKE---------------------------- 242 (435)
T ss_dssp SC-----EEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCB----------------------------
T ss_pred CC-----ceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcce----------------------------
Confidence 21 122222 233457788999999999999999999999985311
Q ss_pred cCCCCCcceEEecccceeeeEEEeeeeeeeCCC-eEEEEEeCCCeEEEEECCCCeEEE---EeecCCCCeEEEEECCCCC
Q 022074 190 KHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQ-KYIYTGSHDSCVYVYDLVSGEQVA---ALKYHTSPVRDCSWHPSQP 265 (303)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-~~latg~~dg~i~iwd~~~~~~~~---~~~~h~~~I~~v~~sp~~~ 265 (303)
+..+.+|..... +..|+|++ .++++|+.|+.|++||+.+++... ...+|..+|++++|+|+++
T Consensus 243 -------~~~~~~h~~~v~------~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~ 309 (435)
T 4e54_B 243 -------LWNLRMHKKKVT------HVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGA 309 (435)
T ss_dssp -------CCCSBCCSSCEE------EEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSS
T ss_pred -------eEEEecccceEE------eeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCC
Confidence 011122221111 12356655 478899999999999998765432 3357999999999999999
Q ss_pred eEEEEeCCCCEEEeecCCC
Q 022074 266 MLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 266 ~las~s~Dg~i~~Wd~~~~ 284 (303)
+|+|++.||+|++||+...
T Consensus 310 ~l~s~~~D~~i~iwd~~~~ 328 (435)
T 4e54_B 310 RLLTTDQKSEIRVYSASQW 328 (435)
T ss_dssp EEEEEESSSCEEEEESSSS
T ss_pred eeEEEcCCCEEEEEECCCC
Confidence 9999999999999998643
No 46
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.97 E-value=2.1e-29 Score=237.47 Aligned_cols=235 Identities=24% Similarity=0.405 Sum_probs=174.4
Q ss_pred CCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCcccc
Q 022074 36 GGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLN 115 (303)
Q Consensus 36 ~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~ 115 (303)
.||+.+|.+|+|+|||++|++|+.|++|+|||. +++....+.+|...|.+++|+| ++++|++++.|++|++||..
T Consensus 13 ~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fsp-dg~~las~~~d~~i~vWd~~--- 87 (577)
T 2ymu_A 13 EAHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSP-DGQTIASASDDKTVKLWNRN--- 87 (577)
T ss_dssp CCCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEETT---
T ss_pred CCCCCcEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEeCCCCCEEEEEECC-CCCEEEEEeCCCEEEEEECC---
Confidence 699999999999999999999999999999996 6677778999999999999976 58899999999999999953
Q ss_pred CCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCC
Q 022074 116 VKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQ 195 (303)
Q Consensus 116 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (303)
++....+.+|...|.+++|+|++++|++++.|+.+++|+.......... .. ...+....+.+....+......
T Consensus 88 --~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~~--~~---~~~v~~~~~~~~~~~~~~~~~~ 160 (577)
T 2ymu_A 88 --GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLT--GH---SSSVWGVAFSPDGQTIASASDD 160 (577)
T ss_dssp --SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCCEEEEEC--CC---SSCEEEEEECTTSSCEEEEETT
T ss_pred --CCEEEEEECCCCCEEEEEECCCCCEEEEEcCCCceeecccccceeeecc--CC---CCceeeeeeecCCccceecccc
Confidence 4556778899999999999999999999999999999997542211000 00 0001111222222211111111
Q ss_pred c-ceEEecccceeeeEE----EeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEECCCCCeEEEE
Q 022074 196 S-VATYKGHSVLRTLIR----CHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSS 270 (303)
Q Consensus 196 ~-~~~~~~~~~~~~~~~----~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~~las~ 270 (303)
. ...+........... ......++++++++++++.|+.|++||. +++.+..+.+|..+|.+++|+|++++|+++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~ 239 (577)
T 2ymu_A 161 KTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASA 239 (577)
T ss_dssp SEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEE
T ss_pred cceeccccceeeeeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeC-CCcEEEEEecCCCCEEEEEECCCCCEEEEE
Confidence 0 000000000000000 1122347789999999999999999996 567788899999999999999999999999
Q ss_pred eCCCCEEEeecCC
Q 022074 271 SWDGDVVRWEFPG 283 (303)
Q Consensus 271 s~Dg~i~~Wd~~~ 283 (303)
+.|+.+++|+..+
T Consensus 240 ~~d~~i~~w~~~~ 252 (577)
T 2ymu_A 240 SDDKTVKLWNRNG 252 (577)
T ss_dssp ETTSCEEEECTTS
T ss_pred eCCCEEEEEeCCC
Confidence 9999999999643
No 47
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.1e-29 Score=224.29 Aligned_cols=233 Identities=17% Similarity=0.242 Sum_probs=180.4
Q ss_pred CchhhccccccccccCcCcccccCCCcccceEEEEEcCC--CCEEEEeeCCCeEEEEECCCCc--eEEEEecccCCeEEE
Q 022074 12 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD--GRELVAGSSDDCIYVYDLEANK--LSLRILAHTSDVNTV 87 (303)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~--g~~l~sgs~Dg~v~lwd~~~~~--~~~~~~~h~~~v~~l 87 (303)
+|+.|..+.||+.-.+.........+|..+|.+++|+++ +++|++|+.||+|++||+.+++ ....+..|...|.++
T Consensus 28 ~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~ 107 (379)
T 3jrp_A 28 TCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSV 107 (379)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEE
T ss_pred EEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEE
Confidence 345678889998853222212344799999999999987 9999999999999999999986 555677799999999
Q ss_pred EEccCC-CcEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCC-------------CCCEEEEEeCCCcEE
Q 022074 88 CFGDES-GHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRG-------------DGRYLISNGKDQAIK 153 (303)
Q Consensus 88 ~~~~~~-~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~-------------~~~~l~s~~~D~~v~ 153 (303)
+|++.. +++|++++.|+.|++||++... ......+.+|...|.++.++| ++.+|++++.|+.|+
T Consensus 108 ~~~~~~~~~~l~~~~~d~~i~v~d~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~ 185 (379)
T 3jrp_A 108 QWAPHEYGPLLLVASSDGKVSVVEFKENG--TTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVK 185 (379)
T ss_dssp EECCGGGCSEEEEEETTSEEEEEECCTTS--CCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEE
T ss_pred EeCCCCCCCEEEEecCCCcEEEEecCCCC--ceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEE
Confidence 997643 7899999999999999986332 123345668999999999999 689999999999999
Q ss_pred EEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCC---CeEEEEEeC
Q 022074 154 LWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTG---QKYIYTGSH 230 (303)
Q Consensus 154 lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~---~~~latg~~ 230 (303)
+||++....... ....+.+|.... ....|+|+ +++|++++.
T Consensus 186 i~d~~~~~~~~~------------------------------~~~~~~~h~~~v------~~~~~sp~~~~~~~l~s~~~ 229 (379)
T 3jrp_A 186 IWKYNSDAQTYV------------------------------LESTLEGHSDWV------RDVAWSPTVLLRSYLASVSQ 229 (379)
T ss_dssp EEEEETTTTEEE------------------------------EEEEECCCSSCE------EEEEECCCCSSSEEEEEEET
T ss_pred EEEecCCCccee------------------------------eEEEEecccCcE------eEEEECCCCCCCCeEEEEeC
Confidence 999975321100 111222332211 12347788 899999999
Q ss_pred CCeEEEEECCCCe---EEEEe--ecCCCCeEEEEECCCCCeEEEEeCCCCEEEeecC
Q 022074 231 DSCVYVYDLVSGE---QVAAL--KYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFP 282 (303)
Q Consensus 231 dg~i~iwd~~~~~---~~~~~--~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~ 282 (303)
||.|++||+.+++ ....+ ..|..+|++++|+|++++|++++.||.+++|++.
T Consensus 230 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 230 DRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 286 (379)
T ss_dssp TSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEE
T ss_pred CCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCC
Confidence 9999999998864 22222 3488999999999999999999999999999986
No 48
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=2.5e-30 Score=233.97 Aligned_cols=252 Identities=10% Similarity=0.079 Sum_probs=174.7
Q ss_pred EccCchhhccccccccccCcCcc---cccCCCcccceEEEEEcC--------CCCEEEEeeCCCeEEEEECCCCceEEEE
Q 022074 9 DVGSGTMESLANVTEIHDGLDFS---AADDGGYSFGIFSLKFST--------DGRELVAGSSDDCIYVYDLEANKLSLRI 77 (303)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~l~~s~--------~g~~l~sgs~Dg~v~lwd~~~~~~~~~~ 77 (303)
.+-+|+.|..+.+|+.-+|.... .....||+..|.+++|+| ||++|++||.|++|+|||+.++.....+
T Consensus 103 ~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~ 182 (393)
T 4gq1_A 103 FLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAG 182 (393)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEE
T ss_pred EEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeee
Confidence 35578888999999886664221 234589999999999998 8999999999999999999988877788
Q ss_pred ecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCc---------------------cceeecccccCeEEEEe
Q 022074 78 LAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGK---------------------PAGVLMGHLEGITFIDS 136 (303)
Q Consensus 78 ~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~---------------------~~~~~~~h~~~v~~~~~ 136 (303)
..|...|.+++|+|++.++|++++.|++|++||++....... ......+|...+..+.+
T Consensus 183 ~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~ 262 (393)
T 4gq1_A 183 YPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRW 262 (393)
T ss_dssp EECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEE
T ss_pred cCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeee
Confidence 899999999999876667899999999999999863321110 00112467778888887
Q ss_pred C-CCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeee
Q 022074 137 R-GDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFS 215 (303)
Q Consensus 137 ~-~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (303)
. +++.++++++.|+++++||++......... ..........+.+.. ....... ....+.+.
T Consensus 263 ~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~----~~~~~~~~~~~~~~~-----------~~~~~~~---~~~~~~~~ 324 (393)
T 4gq1_A 263 IGSDGSGILAMCKSGAWLRWNLFANNDYNEIS----DSTMKLGPKNLLPNV-----------QGISLFP---SLLGACPH 324 (393)
T ss_dssp ETTTTCEEEEECTTSEEEEEEC-----------------------CCSCSE-----------EEECSSC---CSSCCEEC
T ss_pred ecCCCCEEEEEeCCCCEEEEECccCCCCceEe----eecCccccEEEcccc-----------ccccccC---cceeEEEc
Confidence 5 789999999999999999987543211110 000000000011110 0000000 01111112
Q ss_pred eeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEECCCCCeEEEEeCCCCEEEeec
Q 022074 216 PVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEF 281 (303)
Q Consensus 216 ~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~ 281 (303)
+ ..++.++++|+.||.|++||..+++.+..+..|..+|++++|||||++||++++|| +.+|.+
T Consensus 325 ~--~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 325 P--RYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp S--SCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred c--CCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence 1 24677888899999999999999988888888999999999999999999999776 555654
No 49
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=2.3e-30 Score=231.55 Aligned_cols=244 Identities=15% Similarity=0.120 Sum_probs=175.0
Q ss_pred CchhhccccccccccCc-CcccccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCc---eEEEEecccCCeEEE
Q 022074 12 SGTMESLANVTEIHDGL-DFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANK---LSLRILAHTSDVNTV 87 (303)
Q Consensus 12 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~---~~~~~~~h~~~v~~l 87 (303)
+|+.|..+.||+.-++. +. .....+|+.+|.+++|+|++++|++++.|++|++||+.++. ....+..|...|.++
T Consensus 28 ~~~~d~~i~iw~~~~~~~~~-~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~ 106 (377)
T 3dwl_C 28 TTTATNQVELYEQDGNGWKH-ARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFV 106 (377)
T ss_dssp CCCSSSCBCEEEEETTEEEE-CCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEE
T ss_pred EecCCCEEEEEEccCCceEE-EEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEE
Confidence 45567888999987663 22 23447999999999999999999999999999999999876 455677899999999
Q ss_pred EEccCCCcEEEEecCCCeEEEEcCccccCCCccceeecc-cccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCccc
Q 022074 88 CFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMG-HLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASC 166 (303)
Q Consensus 88 ~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~ 166 (303)
+|++ ++++|++++.|++|++||++.... ......+.+ |...|.+++++|++++|++++.|+.|++||++........
T Consensus 107 ~~~~-~~~~l~~~~~d~~i~iwd~~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 184 (377)
T 3dwl_C 107 RWSP-NEDKFAVGSGARVISVCYFEQEND-WWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKP 184 (377)
T ss_dssp ECCT-TSSCCEEEESSSCEEECCC------CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CC
T ss_pred EECC-CCCEEEEEecCCeEEEEEECCccc-ceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCc
Confidence 9976 578999999999999999863221 113455666 9999999999999999999999999999998643211100
Q ss_pred ccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeE--
Q 022074 167 NLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQ-- 244 (303)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~-- 244 (303)
... .+ ... .+....+..+ +|.... ....|+|++++|++++.||.|++||+.+++.
T Consensus 185 ~~~----~~----------~~~--~~~~~~~~~~-~~~~~v------~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~ 241 (377)
T 3dwl_C 185 EAS----VW----------GSR--LPFNTVCAEY-PSGGWV------HAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPP 241 (377)
T ss_dssp CSC----SS----------CSC--CCEEEEEECC-CCSSSE------EEEEECTTSSCEEEEETTTEEC-CEECSTTSCE
T ss_pred ccc----cc----------ccc--cchhhhhhcc-cCCceE------EEEEECCCCCEEEEEeCCCcEEEEECCCCCCcc
Confidence 000 00 000 0001111122 222111 2234788999999999999999999998876
Q ss_pred --EEEeecCCCCeEEEEECCCCCeEEEEeCCCCEEEeecC
Q 022074 245 --VAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFP 282 (303)
Q Consensus 245 --~~~~~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~ 282 (303)
+..+..|..+|++++|+|++++|++++.|+.+ +|+..
T Consensus 242 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 242 RALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp EECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred eeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 77788999999999999999999999876666 56544
No 50
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.97 E-value=1.3e-29 Score=227.47 Aligned_cols=244 Identities=16% Similarity=0.218 Sum_probs=178.9
Q ss_pred CchhhccccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEcc
Q 022074 12 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGD 91 (303)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~ 91 (303)
+++.|..+.||++-.+.........+|..+|.+++|+|+++++++|+.|++|++||+ +++....+..|...|.+++|++
T Consensus 136 s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~ 214 (383)
T 3ei3_B 136 VSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNP 214 (383)
T ss_dssp EEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECS
T ss_pred EEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECC
Confidence 456778888998853222223333577799999999999999999999999999999 4666777889999999999986
Q ss_pred CCCcEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCC-CCCEEEEEeCCCcEEEEEcccccCCcccccCc
Q 022074 92 ESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRG-DGRYLISNGKDQAIKLWDIRKMSSNASCNLGF 170 (303)
Q Consensus 92 ~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~ 170 (303)
+...+|++++.|++|++||++...........+ +|...|.+++|++ ++.+|++++.|+.|++||++...........
T Consensus 215 ~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~- 292 (383)
T 3ei3_B 215 RCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIH- 292 (383)
T ss_dssp SCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEEC-
T ss_pred CCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccc-
Confidence 544499999999999999987433223334444 7999999999999 9999999999999999999865432211100
Q ss_pred cceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEeec
Q 022074 171 RSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKY 250 (303)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~ 250 (303)
... ...+... ....+.... ... ...+++++++ +|+.|+.|++||+.+++.+..+.+
T Consensus 293 ------------~~~--~~~~~~~-~~~~~~p~~---~~~----~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~ 348 (383)
T 3ei3_B 293 ------------PHR--QFQHLTP-IKATWHPMY---DLI----VAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRD 348 (383)
T ss_dssp ------------CBC--CCTTSCC-CCCEECSSS---SEE----EEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECB
T ss_pred ------------ccc--ccccccc-eEEeccCCC---Cce----EEEecCCccc--ccCCCCeEEEEecCCCceeeeecC
Confidence 000 0000000 000111000 001 1235677877 889999999999999999988886
Q ss_pred --CCCCeEEEEECCCCCeEEEEeCCCCEEEeecCC
Q 022074 251 --HTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPG 283 (303)
Q Consensus 251 --h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~ 283 (303)
|...+..++|+|++++|++++ |+.|++||+..
T Consensus 349 ~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 349 PNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp TTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred CCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 457788889999999999997 99999999864
No 51
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.97 E-value=3.1e-29 Score=227.18 Aligned_cols=248 Identities=17% Similarity=0.158 Sum_probs=181.1
Q ss_pred chhhccccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccC
Q 022074 13 GTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDE 92 (303)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~ 92 (303)
|+.|..+.+|+.-++.... ...+| ..+....|++++++|++|+.||.|++||+.++.....+.+|...|.+++|+|
T Consensus 74 ~~~d~~v~i~d~~~~~~~~--~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~- 149 (420)
T 3vl1_A 74 ARLDGHDFLFNTIIRDGSK--MLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFP- 149 (420)
T ss_dssp EEETTEEEEEECCSEETTT--TSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECT-
T ss_pred EEcCCcEEEEEecccceee--EEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECC-
Confidence 4456777888875554332 22344 3344557899999999999999999999999887766678999999999975
Q ss_pred CCcEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccc
Q 022074 93 SGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRS 172 (303)
Q Consensus 93 ~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~ 172 (303)
++++|++++.|++|++||++ ..+....+.+|...|.++++++++++|++++.|++|++||++.............
T Consensus 150 ~~~~l~s~s~d~~i~iwd~~----~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~- 224 (420)
T 3vl1_A 150 SGEALISSSQDMQLKIWSVK----DGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKEN- 224 (420)
T ss_dssp TSSEEEEEETTSEEEEEETT----TCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTB-
T ss_pred CCCEEEEEeCCCeEEEEeCC----CCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCC-
Confidence 57899999999999999986 3345667889999999999999999999999999999999975432211110000
Q ss_pred eeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEe-ecC
Q 022074 173 YEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAAL-KYH 251 (303)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~-~~h 251 (303)
....+..+.+.+.... .+. ..+ ........|+|++++|++|+.||.|++||+.+++.+..+ ..|
T Consensus 225 ~~~~v~~~~~~~~~~~-------~~~--~~~------~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 289 (420)
T 3vl1_A 225 PHDGVNSIALFVGTDR-------QLH--EIS------TSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKF 289 (420)
T ss_dssp TTCCEEEEEEEECCCS-------SCG--GGC------CCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTT
T ss_pred CCCCccEEEEecCCcc-------eee--ecc------cCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEccccc
Confidence 0000000000000000 000 000 001123457889999999999999999999998876665 458
Q ss_pred CCCeEEEEECCCCC-eEEEEeCCCCEEEeecCCC
Q 022074 252 TSPVRDCSWHPSQP-MLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 252 ~~~I~~v~~sp~~~-~las~s~Dg~i~~Wd~~~~ 284 (303)
..+|++++|+|+++ +|++++.||.|++||+...
T Consensus 290 ~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~ 323 (420)
T 3vl1_A 290 TCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSP 323 (420)
T ss_dssp SSCEEEEEECSSCTTEEEEEETTSEEEEEETTCT
T ss_pred CCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCC
Confidence 89999999999999 9999999999999998754
No 52
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.97 E-value=1.6e-29 Score=244.54 Aligned_cols=207 Identities=23% Similarity=0.342 Sum_probs=168.4
Q ss_pred CCcccceEEEEEcCCC-CEEEEeeCCCeEEEEECCCC-----ceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEE
Q 022074 36 GGYSFGIFSLKFSTDG-RELVAGSSDDCIYVYDLEAN-----KLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVW 109 (303)
Q Consensus 36 ~~~~~~v~~l~~s~~g-~~l~sgs~Dg~v~lwd~~~~-----~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lW 109 (303)
.||+..|.+|+|++++ +.|++||.|++|+|||+.++ .....+.+|...|.+++|++ ++++|+||+.|++|++|
T Consensus 379 ~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~-~g~~l~sgs~Dg~v~vw 457 (694)
T 3dm0_A 379 RAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSS-DGQFALSGSWDGELRLW 457 (694)
T ss_dssp ECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECT-TSSEEEEEETTSEEEEE
T ss_pred ccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECC-CCCEEEEEeCCCcEEEE
Confidence 5999999999999864 68999999999999999764 23456789999999999975 58899999999999999
Q ss_pred cCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccc
Q 022074 110 DRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDL 189 (303)
Q Consensus 110 d~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (303)
|+. .+.....+.+|...|.+++|++++++|+|++.|++|++||++..... . ...
T Consensus 458 d~~----~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~------------~---~~~------- 511 (694)
T 3dm0_A 458 DLA----AGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKY------------T---ISE------- 511 (694)
T ss_dssp ETT----TTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEE------------E---ECS-------
T ss_pred ECC----CCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcce------------e---ecc-------
Confidence 986 34456678899999999999999999999999999999997531100 0 000
Q ss_pred cCCCCCcceEEecccceeeeEEEeeeeeeeCCC--eEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEECCCCCeE
Q 022074 190 KHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQ--KYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPML 267 (303)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~--~~latg~~dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~~l 267 (303)
...+|..... +..|+|++ .++++|+.|++|++||+.+++....+.+|..+|++++|+|++++|
T Consensus 512 ---------~~~~h~~~v~------~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l 576 (694)
T 3dm0_A 512 ---------GGEGHRDWVS------CVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLC 576 (694)
T ss_dssp ---------STTSCSSCEE------EEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEE
T ss_pred ---------CCCCCCCcEE------EEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEE
Confidence 0011111111 12345554 589999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCEEEeecCCC
Q 022074 268 VSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 268 as~s~Dg~i~~Wd~~~~ 284 (303)
+|++.||+|++||+...
T Consensus 577 ~sg~~Dg~i~iwd~~~~ 593 (694)
T 3dm0_A 577 ASGGKDGVVLLWDLAEG 593 (694)
T ss_dssp EEEETTSBCEEEETTTT
T ss_pred EEEeCCCeEEEEECCCC
Confidence 99999999999998654
No 53
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.9e-29 Score=224.55 Aligned_cols=210 Identities=20% Similarity=0.291 Sum_probs=167.8
Q ss_pred CCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECC--CCceEEEEecccCCeEEEEEccC-CCcEEEEecCCCeEEEEcC
Q 022074 35 DGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLE--ANKLSLRILAHTSDVNTVCFGDE-SGHLIYSGSDDNLCKVWDR 111 (303)
Q Consensus 35 ~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~--~~~~~~~~~~h~~~v~~l~~~~~-~~~~l~s~s~dg~v~lWd~ 111 (303)
..||+.+|.+++|+|++++|++|+.||+|+|||+. ++.....+.+|...|.+++|+++ ++++|++++.||+|++||+
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~ 86 (379)
T 3jrp_A 7 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKE 86 (379)
T ss_dssp EEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEE
T ss_pred ecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEc
Confidence 36899999999999999999999999999999998 44555667889999999999654 3789999999999999997
Q ss_pred ccccCCCccceeecccccCeEEEEeCCC--CCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccc
Q 022074 112 RCLNVKGKPAGVLMGHLEGITFIDSRGD--GRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDL 189 (303)
Q Consensus 112 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (303)
+... ......+.+|...|.+++++++ +.+|++++.|+.|++||++.......
T Consensus 87 ~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~------------------------ 140 (379)
T 3jrp_A 87 ENGR--WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSP------------------------ 140 (379)
T ss_dssp ETTE--EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCE------------------------
T ss_pred CCCc--eeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceee------------------------
Confidence 6321 1245567789999999999999 99999999999999999875321110
Q ss_pred cCCCCCcceEEecccceeeeEEEeeeeeeeC-------------CCeEEEEEeCCCeEEEEECCCCe----EEEEeecCC
Q 022074 190 KHPCDQSVATYKGHSVLRTLIRCHFSPVYST-------------GQKYIYTGSHDSCVYVYDLVSGE----QVAALKYHT 252 (303)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-------------~~~~latg~~dg~i~iwd~~~~~----~~~~~~~h~ 252 (303)
..+.++..... ...|+| ++.++++|+.||.|++||+.+++ .+..+.+|.
T Consensus 141 --------~~~~~~~~~v~------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~ 206 (379)
T 3jrp_A 141 --------IIIDAHAIGVN------SASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS 206 (379)
T ss_dssp --------EEEECCTTCEE------EEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCS
T ss_pred --------EEecCCCCceE------EEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEeccc
Confidence 01111111111 112333 68999999999999999997653 456778899
Q ss_pred CCeEEEEECCC---CCeEEEEeCCCCEEEeecCCC
Q 022074 253 SPVRDCSWHPS---QPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 253 ~~I~~v~~sp~---~~~las~s~Dg~i~~Wd~~~~ 284 (303)
.+|++++|+|+ +++|++++.||.|++||+...
T Consensus 207 ~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 207 DWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 241 (379)
T ss_dssp SCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred CcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCC
Confidence 99999999999 899999999999999998753
No 54
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=6.1e-29 Score=220.17 Aligned_cols=243 Identities=19% Similarity=0.236 Sum_probs=173.6
Q ss_pred cCCCcccceEEEEEcCC---CCEEEEeeCCCeEEEEECCC-CceE-EEEecccCCeEEEEEccCCCcEEEEecCCCeEEE
Q 022074 34 DDGGYSFGIFSLKFSTD---GRELVAGSSDDCIYVYDLEA-NKLS-LRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKV 108 (303)
Q Consensus 34 ~~~~~~~~v~~l~~s~~---g~~l~sgs~Dg~v~lwd~~~-~~~~-~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~l 108 (303)
...+|+.+|.+++|+|+ |++|++|+.||.|+|||+.+ +... ..+.+|...|.+++|++ ++++|++++.||+|++
T Consensus 34 ~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~v~i 112 (368)
T 3mmy_A 34 VTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSD-DGSKVFTASCDKTAKM 112 (368)
T ss_dssp CSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECT-TSSEEEEEETTSEEEE
T ss_pred eccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECc-CCCEEEEEcCCCcEEE
Confidence 34799999999999999 69999999999999999987 4443 56778999999999975 6889999999999999
Q ss_pred EcCccccCCCccceeecccccCeEEEEe--CCCCCEEEEEeCCCcEEEEEcccccCCcccccCccce-------------
Q 022074 109 WDRRCLNVKGKPAGVLMGHLEGITFIDS--RGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSY------------- 173 (303)
Q Consensus 109 Wd~~~~~~~~~~~~~~~~h~~~v~~~~~--~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~------------- 173 (303)
||++. .. ...+.+|...|.++.+ ++++.+|++++.|+.|++||++...............
T Consensus 113 wd~~~----~~-~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (368)
T 3mmy_A 113 WDLSS----NQ-AIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVAT 187 (368)
T ss_dssp EETTT----TE-EEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEE
T ss_pred EEcCC----CC-ceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEe
Confidence 99862 22 2235679999999999 8999999999999999999998654332222111000
Q ss_pred ------eeecee-----eeCC-C------------CCc-----cccCCCCCcceE--------------Eecccceeee-
Q 022074 174 ------EWDYRW-----MDYP-P------------QAR-----DLKHPCDQSVAT--------------YKGHSVLRTL- 209 (303)
Q Consensus 174 ------~~~~~~-----~~~~-~------------~~~-----~~~~~~~~~~~~--------------~~~~~~~~~~- 209 (303)
.|+... .... + ... .+....+..+.. +.+|......
T Consensus 188 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (368)
T 3mmy_A 188 AERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNT 267 (368)
T ss_dssp GGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----
T ss_pred CCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccc
Confidence 011000 0000 0 000 000000111111 1111100000
Q ss_pred -----EEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEECCCCCeEEEEeCCCCEEEeecC
Q 022074 210 -----IRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFP 282 (303)
Q Consensus 210 -----~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~ 282 (303)
........|+|++++|++|+.||.|++||+.+++.+..+..|..+|++++|+|++++|++++.|+..+.|++-
T Consensus 268 ~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~ 345 (368)
T 3mmy_A 268 SAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFY 345 (368)
T ss_dssp CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGGC
T ss_pred cccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEeccccccccccc
Confidence 0012234588999999999999999999999999999999999999999999999999999999877777654
No 55
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.7e-28 Score=217.40 Aligned_cols=225 Identities=19% Similarity=0.247 Sum_probs=178.9
Q ss_pred CcCcccccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeE
Q 022074 27 GLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLC 106 (303)
Q Consensus 27 ~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v 106 (303)
|.........||+.+|.+++|+|+|++|++|+.||.|++||+.+++....+..|...|.+++|++ ++++|++++.||+|
T Consensus 20 G~~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i 98 (369)
T 3zwl_B 20 GSHMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDC-FTKYCVTGSADYSI 98 (369)
T ss_dssp CCSEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTTEE
T ss_pred ccccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcC-CCCEEEEEeCCCeE
Confidence 34443445579999999999999999999999999999999999998888999999999999975 57899999999999
Q ss_pred EEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCC-----CcEEEEEcccccCCcccccCccceeeeceeee
Q 022074 107 KVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKD-----QAIKLWDIRKMSSNASCNLGFRSYEWDYRWMD 181 (303)
Q Consensus 107 ~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D-----~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~ 181 (303)
++||++. .+....+. |...+.++.++++++++++++.+ +.|++||++..........
T Consensus 99 ~iwd~~~----~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~------------- 160 (369)
T 3zwl_B 99 KLWDVSN----GQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTK------------- 160 (369)
T ss_dssp EEEETTT----CCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEE-------------
T ss_pred EEEECCC----CcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecc-------------
Confidence 9999862 33444444 78889999999999999999999 9999999976432211100
Q ss_pred CCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCC-CeEEEEeecCCCCeEEEEE
Q 022074 182 YPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVS-GEQVAALKYHTSPVRDCSW 260 (303)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~-~~~~~~~~~h~~~I~~v~~ 260 (303)
.....+..+.++.....+ ....+++++++|++++.||.|++||+.+ ++.+..+..|..+|.+++|
T Consensus 161 ----------~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~ 226 (369)
T 3zwl_B 161 ----------VSEEPIHKIITHEGLDAA----TVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQF 226 (369)
T ss_dssp ----------ECSSCSEEEECCTTCCCE----EEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEE
T ss_pred ----------cccceeeeccCCcCccce----eEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEE
Confidence 000111222222211111 1234677899999999999999999998 6888889999999999999
Q ss_pred CCCCCeEEEEeCCCCEEEeecCCC
Q 022074 261 HPSQPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 261 sp~~~~las~s~Dg~i~~Wd~~~~ 284 (303)
+|++++|++++.|+.+++||+...
T Consensus 227 ~~~~~~l~~~~~d~~i~v~d~~~~ 250 (369)
T 3zwl_B 227 SPDLTYFITSSRDTNSFLVDVSTL 250 (369)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTC
T ss_pred CCCCCEEEEecCCceEEEEECCCC
Confidence 999999999999999999998653
No 56
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.97 E-value=3.6e-29 Score=242.07 Aligned_cols=229 Identities=21% Similarity=0.296 Sum_probs=181.3
Q ss_pred CchhhccccccccccCcCcc---cccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEE
Q 022074 12 SGTMESLANVTEIHDGLDFS---AADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVC 88 (303)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~ 88 (303)
+|+.|..+.||+.-++.... .....||+..|.+++|+|+|++|++|+.||+|+|||+.++.....+.+|...|.+++
T Consensus 400 s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~ 479 (694)
T 3dm0_A 400 SASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVA 479 (694)
T ss_dssp EEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEE
T ss_pred EEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEE
Confidence 67788999999886554321 123469999999999999999999999999999999999988888999999999999
Q ss_pred EccCCCcEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCCCC--CEEEEEeCCCcEEEEEcccccCCccc
Q 022074 89 FGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDG--RYLISNGKDQAIKLWDIRKMSSNASC 166 (303)
Q Consensus 89 ~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~l~s~~~D~~v~lWdl~~~~~~~~~ 166 (303)
|++ +++.|+||+.|++|++||..... .........+|...|.++.+++++ .++++++.|++|++||++....
T Consensus 480 ~s~-~~~~l~s~s~D~~i~iwd~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~---- 553 (694)
T 3dm0_A 480 FSL-DNRQIVSASRDRTIKLWNTLGEC-KYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKL---- 553 (694)
T ss_dssp ECT-TSSCEEEEETTSCEEEECTTSCE-EEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCE----
T ss_pred EeC-CCCEEEEEeCCCEEEEEECCCCc-ceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcE----
Confidence 975 57889999999999999964211 001111234788999999999986 6899999999999999864221
Q ss_pred ccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEE
Q 022074 167 NLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVA 246 (303)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~ 246 (303)
...+.+|.... .+..|+|++++|++|+.||.|++||+.+++.+.
T Consensus 554 ------------------------------~~~~~~h~~~v------~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~ 597 (694)
T 3dm0_A 554 ------------------------------RSTLAGHTGYV------STVAVSPDGSLCASGGKDGVVLLWDLAEGKKLY 597 (694)
T ss_dssp ------------------------------EEEECCCSSCE------EEEEECTTSSEEEEEETTSBCEEEETTTTEEEE
T ss_pred ------------------------------EEEEcCCCCCE------EEEEEeCCCCEEEEEeCCCeEEEEECCCCceEE
Confidence 12233333211 123477899999999999999999999999888
Q ss_pred EeecCCCCeEEEEECCCCCeEEEEeCCCCEEEeecCCC
Q 022074 247 ALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 247 ~~~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~~ 284 (303)
.+.. ...|.+++|+|++.+|++++ |+.|++||+...
T Consensus 598 ~~~~-~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~ 633 (694)
T 3dm0_A 598 SLEA-NSVIHALCFSPNRYWLCAAT-EHGIKIWDLESK 633 (694)
T ss_dssp CCBC-SSCEEEEEECSSSSEEEEEE-TTEEEEEETTTT
T ss_pred EecC-CCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCC
Confidence 7764 56899999999999888776 566999998754
No 57
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.97 E-value=7e-29 Score=222.69 Aligned_cols=202 Identities=14% Similarity=0.162 Sum_probs=165.4
Q ss_pred CCcccceEEEEEcCCC-CEEEEeeCCCeEEEEECCCCceEEEEe--cccCCeEEEEEccCCCcEEEEecCCCeEEEEcCc
Q 022074 36 GGYSFGIFSLKFSTDG-RELVAGSSDDCIYVYDLEANKLSLRIL--AHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRR 112 (303)
Q Consensus 36 ~~~~~~v~~l~~s~~g-~~l~sgs~Dg~v~lwd~~~~~~~~~~~--~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~ 112 (303)
.+|..+|.+++|+|++ ++|++|+.||+|+|||+.++.....+. +|...|.+++|++.++++|++++.|++|++||++
T Consensus 70 ~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 149 (383)
T 3ei3_B 70 SPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFS 149 (383)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETT
T ss_pred cCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECC
Confidence 6999999999999999 899999999999999999887665554 6999999999987567899999999999999986
Q ss_pred cccCCCccceeec---ccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccc
Q 022074 113 CLNVKGKPAGVLM---GHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDL 189 (303)
Q Consensus 113 ~~~~~~~~~~~~~---~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (303)
. .....+. +|...|.++++++++++|++++.|+.|++||++..
T Consensus 150 ~-----~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~----------------------------- 195 (383)
T 3ei3_B 150 G-----SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGH----------------------------- 195 (383)
T ss_dssp S-----CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSC-----------------------------
T ss_pred C-----CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCC-----------------------------
Confidence 2 2233333 34578999999999999999999999999998421
Q ss_pred cCCCCCcceEEecccceeeeEEEeeeeeeeCCCe-EEEEEeCCCeEEEEECCC----CeEEEEeecCCCCeEEEEECC-C
Q 022074 190 KHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQK-YIYTGSHDSCVYVYDLVS----GEQVAALKYHTSPVRDCSWHP-S 263 (303)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~latg~~dg~i~iwd~~~----~~~~~~~~~h~~~I~~v~~sp-~ 263 (303)
.+..+.+|.... ....|+|+++ +|++|+.|+.|++||+.+ ++.+..+ .|..+|++++|+| +
T Consensus 196 ------~~~~~~~h~~~v------~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~ 262 (383)
T 3ei3_B 196 ------EIFKEKLHKAKV------THAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTD 262 (383)
T ss_dssp ------EEEEEECSSSCE------EEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTT
T ss_pred ------EEEEeccCCCcE------EEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCC
Confidence 111222222111 1234677888 999999999999999987 5666666 6999999999999 9
Q ss_pred CCeEEEEeCCCCEEEeecCCC
Q 022074 264 QPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 264 ~~~las~s~Dg~i~~Wd~~~~ 284 (303)
+++|++++.|+.|++||+...
T Consensus 263 ~~~l~~~~~d~~i~iwd~~~~ 283 (383)
T 3ei3_B 263 STKLLTTDQRNEIRVYSSYDW 283 (383)
T ss_dssp SCEEEEEESSSEEEEEETTBT
T ss_pred CCEEEEEcCCCcEEEEECCCC
Confidence 999999999999999998643
No 58
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=1.9e-30 Score=232.13 Aligned_cols=208 Identities=16% Similarity=0.123 Sum_probs=161.4
Q ss_pred CcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCC--ceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccc
Q 022074 37 GYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN--KLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCL 114 (303)
Q Consensus 37 ~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~--~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~ 114 (303)
.|..+|.+++|+|+|++|++|+.|++|+|||+.++ +....+.+|...|.+++|++ ++++|++++.|++|++||++..
T Consensus 9 ~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~d~~v~vwd~~~~ 87 (377)
T 3dwl_C 9 ILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAP-KSNRIVTCSQDRNAYVYEKRPD 87 (377)
T ss_dssp ECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECT-TTCCEEEEETTSSEEEC-----
T ss_pred cCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeC-CCCEEEEEeCCCeEEEEEcCCC
Confidence 35567999999999999999999999999999988 55566778999999999975 4789999999999999998632
Q ss_pred cCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCC
Q 022074 115 NVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCD 194 (303)
Q Consensus 115 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (303)
. ...+...+.+|...|.++.+++++++|++++.|+.|++||++......
T Consensus 88 ~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~------------------------------ 136 (377)
T 3dwl_C 88 G-TWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWW------------------------------ 136 (377)
T ss_dssp --CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CC------------------------------
T ss_pred C-ceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccce------------------------------
Confidence 2 122455677899999999999999999999999999999987532100
Q ss_pred CcceEEec-ccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECC------------------CCeEEEEeecCCCCe
Q 022074 195 QSVATYKG-HSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLV------------------SGEQVAALKYHTSPV 255 (303)
Q Consensus 195 ~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~------------------~~~~~~~~~~h~~~I 255 (303)
....+.+ |.... ....|+|++++|++|+.|+.|++||+. .++.+..+ .|..+|
T Consensus 137 -~~~~~~~~h~~~v------~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v 208 (377)
T 3dwl_C 137 -VSKHLKRPLRSTI------LSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWV 208 (377)
T ss_dssp -CCEEECSSCCSCE------EEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSE
T ss_pred -eeeEeecccCCCe------EEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceE
Confidence 0111111 21111 123477899999999999999999985 34566666 899999
Q ss_pred EEEEECCCCCeEEEEeCCCCEEEeecCCC
Q 022074 256 RDCSWHPSQPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 256 ~~v~~sp~~~~las~s~Dg~i~~Wd~~~~ 284 (303)
++++|+|++++|++++.|+.|++||+...
T Consensus 209 ~~~~~sp~~~~l~~~~~d~~i~iwd~~~~ 237 (377)
T 3dwl_C 209 HAVGFSPSGNALAYAGHDSSVTIAYPSAP 237 (377)
T ss_dssp EEEEECTTSSCEEEEETTTEEC-CEECST
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 99999999999999999999999998754
No 59
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.97 E-value=2.9e-29 Score=229.74 Aligned_cols=267 Identities=17% Similarity=0.183 Sum_probs=184.0
Q ss_pred ccCchhhccccccccccCcCcccccCCCcccceEEEEEcC-CCCEEEEeeCCCeEEEEECCCCceEEEEecc--cCCeEE
Q 022074 10 VGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST-DGRELVAGSSDDCIYVYDLEANKLSLRILAH--TSDVNT 86 (303)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~-~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h--~~~v~~ 86 (303)
+-+|+.|..|.||+.-++.........||..+|.+|+|+| ++++|++|+.||+|+|||++++........| ...+.+
T Consensus 135 lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~ 214 (435)
T 4e54_B 135 VAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCS 214 (435)
T ss_dssp EEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCC
T ss_pred EEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEE
Confidence 3456788999999987766554445579999999999998 7899999999999999999877544333333 335788
Q ss_pred EEEccCCCcEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCCCCC-EEEEEeCCCcEEEEEcccccCCcc
Q 022074 87 VCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGR-YLISNGKDQAIKLWDIRKMSSNAS 165 (303)
Q Consensus 87 l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~D~~v~lWdl~~~~~~~~ 165 (303)
++|++ ++++|++|+.||+|++||++ .+....+.+|...|.+++|+|++. +|++++.|++|++||++.......
T Consensus 215 ~~~~~-~~~~l~~g~~dg~i~~wd~~-----~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~ 288 (435)
T 4e54_B 215 LDVSA-SSRMVVTGDNVGNVILLNMD-----GKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKAS 288 (435)
T ss_dssp EEEET-TTTEEEEECSSSBEEEEESS-----SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSC
T ss_pred EEECC-CCCEEEEEeCCCcEeeeccC-----cceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccce
Confidence 99975 57899999999999999975 234556778999999999999875 788999999999999987543322
Q ss_pred cccCccceeeeceeeeCCCCCccccCCC-CCcceEEecccc--eeeeE---------EEeeeeeeeCCCeEEEEEe----
Q 022074 166 CNLGFRSYEWDYRWMDYPPQARDLKHPC-DQSVATYKGHSV--LRTLI---------RCHFSPVYSTGQKYIYTGS---- 229 (303)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~---------~~~~~~~~s~~~~~latg~---- 229 (303)
... .......+..+.+.++...+.... +..+..++-... ..... .......+++++.++++++
T Consensus 289 ~~~-~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 367 (435)
T 4e54_B 289 FLY-SLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDP 367 (435)
T ss_dssp CSB-CCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCT
T ss_pred EEE-eeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCC
Confidence 211 011112223344555544443322 233333322110 00000 0001122445555555553
Q ss_pred --------CCCeEEEEECCCCeEEEEe-ecCCCCeEEE-EECCCCCeEEEEeCCCCEEEeecCCC
Q 022074 230 --------HDSCVYVYDLVSGEQVAAL-KYHTSPVRDC-SWHPSQPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 230 --------~dg~i~iwd~~~~~~~~~~-~~h~~~I~~v-~~sp~~~~las~s~Dg~i~~Wd~~~~ 284 (303)
.++.|++||..+++.+..+ .+|...|.++ +|||++++||+|+ |++|++|++...
T Consensus 368 ~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~g 431 (435)
T 4e54_B 368 NFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEA 431 (435)
T ss_dssp TSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC--
T ss_pred CeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcC
Confidence 3468999999999988776 4788889987 6999999999986 789999998754
No 60
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.97 E-value=5.1e-29 Score=221.62 Aligned_cols=244 Identities=15% Similarity=0.154 Sum_probs=179.6
Q ss_pred CCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCc--eEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCcc
Q 022074 36 GGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANK--LSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRC 113 (303)
Q Consensus 36 ~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~--~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~ 113 (303)
..|+.+|.+++|+|+++++++|+.|+.|++||+.+++ ....+.+|...|.+++|++ ++++|++++.|+.|++||++.
T Consensus 5 ~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~~~~~dg~i~vwd~~~ 83 (372)
T 1k8k_C 5 SFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAP-DSNRIVTCGTDRNAYVWTLKG 83 (372)
T ss_dssp ESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEET-TTTEEEEEETTSCEEEEEEET
T ss_pred cccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeC-CCCEEEEEcCCCeEEEEECCC
Confidence 4588899999999999999999999999999999987 6677889999999999976 578999999999999999752
Q ss_pred ccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCC-
Q 022074 114 LNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHP- 192 (303)
Q Consensus 114 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 192 (303)
.. ......+.+|...|.++.+++++++|++++.|+.|++||++..................+..+.+.+....+...
T Consensus 84 ~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 161 (372)
T 1k8k_C 84 RT--WKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGS 161 (372)
T ss_dssp TE--EEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEE
T ss_pred Ce--eeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEc
Confidence 21 112223467889999999999999999999999999999986432111100000111112223333433333222
Q ss_pred CCCcceEEecc-------------------cceeeeEE----EeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEee
Q 022074 193 CDQSVATYKGH-------------------SVLRTLIR----CHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALK 249 (303)
Q Consensus 193 ~~~~~~~~~~~-------------------~~~~~~~~----~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~ 249 (303)
.+..+..++-. ........ ......|+|++++|++++.|+.|++||+.+++.+..+.
T Consensus 162 ~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 241 (372)
T 1k8k_C 162 CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLA 241 (372)
T ss_dssp TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEE
T ss_pred CCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEc
Confidence 12233333310 00000000 11234578899999999999999999999999999999
Q ss_pred cCCCCeEEEEECCCCCeEEEEeCCCCEEEeecCC
Q 022074 250 YHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPG 283 (303)
Q Consensus 250 ~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~ 283 (303)
.|..+|.+++|+|++++|+++ .|+.+++|++..
T Consensus 242 ~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 242 SETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp CSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred cCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 999999999999999998888 899999999875
No 61
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=1.7e-28 Score=221.93 Aligned_cols=230 Identities=17% Similarity=0.232 Sum_probs=178.7
Q ss_pred CchhhccccccccccCcCc--ccccCCCcccceEEEEEcC-CCCEEEEeeCCCeEEEEECCCC-------ceEEEEeccc
Q 022074 12 SGTMESLANVTEIHDGLDF--SAADDGGYSFGIFSLKFST-DGRELVAGSSDDCIYVYDLEAN-------KLSLRILAHT 81 (303)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~l~~s~-~g~~l~sgs~Dg~v~lwd~~~~-------~~~~~~~~h~ 81 (303)
+|+.+..+.||+.-..... ......||+.+|.+++|+| +++.|++|+.||+|+|||+.++ .....+.+|.
T Consensus 52 ~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~ 131 (402)
T 2aq5_A 52 EASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHT 131 (402)
T ss_dssp CCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCS
T ss_pred EEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCC
Confidence 4556778888887443322 1223479999999999999 9999999999999999999987 4456788999
Q ss_pred CCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCccceee--cccccCeEEEEeCCCCCEEEEEeCCCcEEEEEccc
Q 022074 82 SDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVL--MGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRK 159 (303)
Q Consensus 82 ~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~ 159 (303)
..|.+++|+++..++|++++.|++|++||++ .......+ .+|...|.++++++++++|++++.|+.|++||++.
T Consensus 132 ~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~----~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 207 (402)
T 2aq5_A 132 KRVGIVAWHPTAQNVLLSAGCDNVILVWDVG----TGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRK 207 (402)
T ss_dssp SCEEEEEECSSBTTEEEEEETTSCEEEEETT----TTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTT
T ss_pred CeEEEEEECcCCCCEEEEEcCCCEEEEEECC----CCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCC
Confidence 9999999987644799999999999999986 33445566 68999999999999999999999999999999875
Q ss_pred ccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEE-ecccceeeeEEEeeeeeeeCCCeEEEEE---eCCCeEE
Q 022074 160 MSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATY-KGHSVLRTLIRCHFSPVYSTGQKYIYTG---SHDSCVY 235 (303)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~latg---~~dg~i~ 235 (303)
.... ..+ .+|... .. ....|++++++|++| +.|+.|+
T Consensus 208 ~~~~----------------------------------~~~~~~~~~~-~~----~~~~~~~~~~~l~~g~~~~~d~~i~ 248 (402)
T 2aq5_A 208 GTVV----------------------------------AEKDRPHEGT-RP----VHAVFVSEGKILTTGFSRMSERQVA 248 (402)
T ss_dssp TEEE----------------------------------EEEECSSCSS-SC----CEEEECSTTEEEEEEECTTCCEEEE
T ss_pred Ccee----------------------------------eeeccCCCCC-cc----eEEEEcCCCcEEEEeccCCCCceEE
Confidence 3211 011 111100 00 112367889999999 7999999
Q ss_pred EEECCCCeE-EEEee-cCCCCeEEEEECCCCCeEE-EEeCCCCEEEeecCCC
Q 022074 236 VYDLVSGEQ-VAALK-YHTSPVRDCSWHPSQPMLV-SSSWDGDVVRWEFPGN 284 (303)
Q Consensus 236 iwd~~~~~~-~~~~~-~h~~~I~~v~~sp~~~~la-s~s~Dg~i~~Wd~~~~ 284 (303)
+||+.+++. +.... .|...+.+++|+|++++|+ +++.|+.|++||+...
T Consensus 249 iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~ 300 (402)
T 2aq5_A 249 LWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSE 300 (402)
T ss_dssp EEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSS
T ss_pred EEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCC
Confidence 999988654 33333 5778899999999999886 5557999999998754
No 62
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.97 E-value=5.3e-29 Score=220.11 Aligned_cols=259 Identities=17% Similarity=0.198 Sum_probs=184.3
Q ss_pred hccccccccccCcCcccccCCCcccceEEEEEcCC---CCEEEEeeCCCeEEEEECCCCc-eEEEEecccCCeEEEEEcc
Q 022074 16 ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD---GRELVAGSSDDCIYVYDLEANK-LSLRILAHTSDVNTVCFGD 91 (303)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~---g~~l~sgs~Dg~v~lwd~~~~~-~~~~~~~h~~~v~~l~~~~ 91 (303)
|..+.||+.-+|... .....+|..+|.+++|+|+ |+++++|+.||.|++||+.+++ ....+.+|...|.++.|.+
T Consensus 43 d~~v~iw~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~ 121 (357)
T 3i2n_A 43 TGVIQLYEIQHGDLK-LLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIG 121 (357)
T ss_dssp CEEEEEEEECSSSEE-EEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEES
T ss_pred CcEEEEEeCCCCccc-ceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeecc
Confidence 788899988655432 2333589999999999998 6999999999999999999887 6777889999999997642
Q ss_pred -----CCCcEEEEecCCCeEEEEcCccccCCCccceeeccccc----CeEEEE----eCCCCCEEEEEeCCCcEEEEEcc
Q 022074 92 -----ESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLE----GITFID----SRGDGRYLISNGKDQAIKLWDIR 158 (303)
Q Consensus 92 -----~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~----~v~~~~----~~~~~~~l~s~~~D~~v~lWdl~ 158 (303)
++++.|++++.|++|++||++... .+...+..|.. .+.++. ++++++++++++.|+.|++||++
T Consensus 122 ~~~~s~~~~~l~~~~~d~~i~vwd~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~ 198 (357)
T 3i2n_A 122 GLGIGEGAPEIVTGSRDGTVKVWDPRQKD---DPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLR 198 (357)
T ss_dssp GGGCC-CCCEEEEEETTSCEEEECTTSCS---SCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETT
T ss_pred ccccCCCccEEEEEeCCCeEEEEeCCCCC---CcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECc
Confidence 457899999999999999986322 23444444433 688887 78899999999999999999998
Q ss_pred cccCCcccccCccceeeeceeeeCCC---CCccccCCC-CCcceEEeccc--ceeee--------EEEeeeeeeeCCCe-
Q 022074 159 KMSSNASCNLGFRSYEWDYRWMDYPP---QARDLKHPC-DQSVATYKGHS--VLRTL--------IRCHFSPVYSTGQK- 223 (303)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~--~~~~~--------~~~~~~~~~s~~~~- 223 (303)
.......... ...+..+.+.+ ....+.... +..+..++-.. ..... ........|+|+++
T Consensus 199 ~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 273 (357)
T 3i2n_A 199 NMALRWETNI-----KNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRE 273 (357)
T ss_dssp TTEEEEEEEC-----SSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEE
T ss_pred cCceeeecCC-----CCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCc
Confidence 6443211111 11122233433 333332221 22232222111 00000 00112345788888
Q ss_pred EEEEEeCCCeEEEEECCCC-------------------eEEEEeecCCCCeEEEEECCCCCeEE-EEeCCCCEEEeecCC
Q 022074 224 YIYTGSHDSCVYVYDLVSG-------------------EQVAALKYHTSPVRDCSWHPSQPMLV-SSSWDGDVVRWEFPG 283 (303)
Q Consensus 224 ~latg~~dg~i~iwd~~~~-------------------~~~~~~~~h~~~I~~v~~sp~~~~la-s~s~Dg~i~~Wd~~~ 283 (303)
+|++|+.||.|++||+.++ +.+..+..|..+|++++|+|++++|+ |++.|+.+++||+..
T Consensus 274 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 274 LFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTK 353 (357)
T ss_dssp EEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC
T ss_pred EEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCC
Confidence 8999999999999998753 45777889999999999999999998 899999999999864
No 63
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.97 E-value=1.8e-28 Score=250.64 Aligned_cols=265 Identities=20% Similarity=0.269 Sum_probs=201.1
Q ss_pred CchhhccccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEcc
Q 022074 12 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGD 91 (303)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~ 91 (303)
+|+.|..+.||+.-+|.... ...+|..+|.+++|+|+|+++++|+.||+|++||+.+++....+.+|...|.+++|++
T Consensus 632 s~~~d~~i~vw~~~~~~~~~--~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~ 709 (1249)
T 3sfz_A 632 SCGADKTLQVFKAETGEKLL--DIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTN 709 (1249)
T ss_dssp EEETTSCEEEEETTTCCEEE--EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECS
T ss_pred EEeCCCeEEEEECCCCCEEE--EeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEec
Confidence 45677889999987776442 3369999999999999999999999999999999999998888999999999999976
Q ss_pred C-CCcEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCc
Q 022074 92 E-SGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGF 170 (303)
Q Consensus 92 ~-~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~ 170 (303)
+ +..++++|+.|++|++||++ .+.....+.+|...|.++.++|+++++++++.|+.|++||++............
T Consensus 710 ~~~~~~l~sg~~d~~v~vwd~~----~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~ 785 (1249)
T 3sfz_A 710 KSNHLLLATGSNDFFLKLWDLN----QKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKR 785 (1249)
T ss_dssp SSSCCEEEEEETTSCEEEEETT----SSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCC
T ss_pred CCCceEEEEEeCCCeEEEEECC----CcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccc
Confidence 4 45689999999999999986 344566778999999999999999999999999999999997643221111000
Q ss_pred ---------cceeeeceeeeCCCCCccccCCCCCcceEEecccce--eeeE----EEeeeeeeeCCCeEEEEEeCCCeEE
Q 022074 171 ---------RSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVL--RTLI----RCHFSPVYSTGQKYIYTGSHDSCVY 235 (303)
Q Consensus 171 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~s~~~~~latg~~dg~i~ 235 (303)
......+..+.+.++...+.......+..++..... .... .......|+|+++++++++.||.|+
T Consensus 786 ~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~ 865 (1249)
T 3sfz_A 786 FFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVE 865 (1249)
T ss_dssp CC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEE
T ss_pred cccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEE
Confidence 000011122333344333332222223222211110 0000 0112345788999999999999999
Q ss_pred EEECCCCeEEEEeecCCCCeEEEEECCCCCeEEEEeCCCCEEEeecC
Q 022074 236 VYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFP 282 (303)
Q Consensus 236 iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~ 282 (303)
+||..+++.+..+.+|..+|++++|+|++++|++++.|+++++|++.
T Consensus 866 vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~ 912 (1249)
T 3sfz_A 866 LWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETK 912 (1249)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHH
T ss_pred EEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEcc
Confidence 99999999999999999999999999999999999999999999975
No 64
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.97 E-value=1.4e-28 Score=216.48 Aligned_cols=237 Identities=18% Similarity=0.097 Sum_probs=176.0
Q ss_pred CCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCc---eEEEEecccCCeEEEEEccCCCc-EEEEecCCCeEEEEc
Q 022074 35 DGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANK---LSLRILAHTSDVNTVCFGDESGH-LIYSGSDDNLCKVWD 110 (303)
Q Consensus 35 ~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~---~~~~~~~h~~~v~~l~~~~~~~~-~l~s~s~dg~v~lWd 110 (303)
..+|+.+|.+++|+|++++|++++.||+|+|||+.++. ....+..|...|.+++|+++ ++ +|++++.||.|++||
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~dg~i~~wd 85 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDN-TDLQIYVGTVQGEILKVD 85 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEES-SSEEEEEEETTSCEEEEC
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCC-CCcEEEEEcCCCeEEEEE
Confidence 46899999999999999999999999999999998876 23456689999999999764 78 899999999999999
Q ss_pred C-ccccCCCccceeecc--cccCeEEEEeCCCCCEEEEEeCCCcEEEEEccc---------ccCCcccccCccceeeece
Q 022074 111 R-RCLNVKGKPAGVLMG--HLEGITFIDSRGDGRYLISNGKDQAIKLWDIRK---------MSSNASCNLGFRSYEWDYR 178 (303)
Q Consensus 111 ~-~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~---------~~~~~~~~~~~~~~~~~~~ 178 (303)
+ ... ....+.+ |...|.++.+++ +++|++++.|+.|++||++. .......... ..+.
T Consensus 86 ~~~~~-----~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-----~~v~ 154 (342)
T 1yfq_A 86 LIGSP-----SFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVK-----NKIF 154 (342)
T ss_dssp SSSSS-----SEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSC-----CCEE
T ss_pred eccCC-----ceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeC-----CceE
Confidence 7 522 2356677 999999999999 99999999999999999986 3322222111 1111
Q ss_pred eeeCCCCCccccCCCCCcceEEeccc-ce---eeeE----EEeeeeeeeC-CCeEEEEEeCCCeEEEEECCCC------e
Q 022074 179 WMDYPPQARDLKHPCDQSVATYKGHS-VL---RTLI----RCHFSPVYST-GQKYIYTGSHDSCVYVYDLVSG------E 243 (303)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~----~~~~~~~~s~-~~~~latg~~dg~i~iwd~~~~------~ 243 (303)
.+.+.+.. .+....+..+..++-.. .. .... .......++| +++++++++.||.|++||+..+ +
T Consensus 155 ~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~ 233 (342)
T 1yfq_A 155 TMDTNSSR-LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSS 233 (342)
T ss_dssp EEEECSSE-EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCT
T ss_pred EEEecCCc-EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccc
Confidence 22222222 11111222233332221 00 0000 0112345788 8999999999999999999876 6
Q ss_pred EEEEeecCCC---------CeEEEEECCCCCeEEEEeCCCCEEEeecCCC
Q 022074 244 QVAALKYHTS---------PVRDCSWHPSQPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 244 ~~~~~~~h~~---------~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~~ 284 (303)
.+..+..|.. +|++++|+|++++|++++.||.|++||+...
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~ 283 (342)
T 1yfq_A 234 KRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTR 283 (342)
T ss_dssp TCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTT
T ss_pred cceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccH
Confidence 6778888865 9999999999999999999999999998643
No 65
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.97 E-value=3.2e-29 Score=227.11 Aligned_cols=226 Identities=19% Similarity=0.247 Sum_probs=173.0
Q ss_pred CchhhccccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEcc
Q 022074 12 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGD 91 (303)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~ 91 (303)
+|+.|..+.||+.-++... ....+|..+|.+++|+|++++|++|+.|++|++||+.+++....+.+|...|.+++|++
T Consensus 114 ~~~~dg~i~iwd~~~~~~~--~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~ 191 (420)
T 3vl1_A 114 LGTTEGDIKVLDSNFNLQR--EIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIID 191 (420)
T ss_dssp EEETTSCEEEECTTSCEEE--EETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEET
T ss_pred EEECCCCEEEEeCCCccee--eecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcC
Confidence 3456778888887544322 23369999999999999999999999999999999999988888889999999999976
Q ss_pred CCCcEEEEecCCCeEEEEcCccccCCCccceeecc---cc---------------------cCeEEEEeCCCCCEEEEEe
Q 022074 92 ESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMG---HL---------------------EGITFIDSRGDGRYLISNG 147 (303)
Q Consensus 92 ~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~---h~---------------------~~v~~~~~~~~~~~l~s~~ 147 (303)
+++.|++++.|++|++||++. .+....+.. |. ..+.++.+++++++|++++
T Consensus 192 -~~~~l~s~~~d~~v~iwd~~~----~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 266 (420)
T 3vl1_A 192 -RGRNVLSASLDGTIRLWECGT----GTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGH 266 (420)
T ss_dssp -TTTEEEEEETTSCEEEEETTT----TEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEE
T ss_pred -CCCEEEEEcCCCcEEEeECCC----CceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEc
Confidence 578999999999999999863 223333332 22 3444555688999999999
Q ss_pred CCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCe-EEE
Q 022074 148 KDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQK-YIY 226 (303)
Q Consensus 148 ~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~la 226 (303)
.|+.|++||++........ ..++.... ....|+|+++ +|+
T Consensus 267 ~dg~i~i~d~~~~~~~~~~---------------------------------~~~~~~~v------~~~~~~~~~~~~l~ 307 (420)
T 3vl1_A 267 VSGVITVHNVFSKEQTIQL---------------------------------PSKFTCSC------NSLTVDGNNANYIY 307 (420)
T ss_dssp TTSCEEEEETTTCCEEEEE---------------------------------CCTTSSCE------EEEEECSSCTTEEE
T ss_pred CCCeEEEEECCCCceeEEc---------------------------------ccccCCCc------eeEEEeCCCCCEEE
Confidence 9999999998753211000 00111101 1234677887 999
Q ss_pred EEeCCCeEEEEECCCCeE-EEEeec-CCCCeEEEEECCCCCeEEEEeCCCCEEEeecCCC
Q 022074 227 TGSHDSCVYVYDLVSGEQ-VAALKY-HTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 227 tg~~dg~i~iwd~~~~~~-~~~~~~-h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~~ 284 (303)
+|+.||.|++||+.+++. +..+.. |..+|+++.| +++++|++++.|+.+++|++...
T Consensus 308 ~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~ 366 (420)
T 3vl1_A 308 AGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDP 366 (420)
T ss_dssp EEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCT
T ss_pred EEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCC
Confidence 999999999999998754 666766 6778888855 57889999999999999998753
No 66
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1e-28 Score=225.42 Aligned_cols=261 Identities=13% Similarity=0.096 Sum_probs=177.6
Q ss_pred Cchhhcccccccccc---CcCcccccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECC---CCceEEEEec------
Q 022074 12 SGTMESLANVTEIHD---GLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLE---ANKLSLRILA------ 79 (303)
Q Consensus 12 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~---~~~~~~~~~~------ 79 (303)
+|+.|..+.||+.-+ |......-..+|..+|.+++|+|+++.|++|+.||+|++||+. +++.......
T Consensus 81 s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~ 160 (437)
T 3gre_A 81 TGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKI 160 (437)
T ss_dssp EEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEE
T ss_pred EecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEE
Confidence 566888899999866 4322222223799999999999999999999999999999994 4543332221
Q ss_pred ------ccCCeEEEEEc-cCCCcEEEEecCCCeEEEEcCccccCCCccceeecc--cccCeEEEEeCCCCCEEEEEeCCC
Q 022074 80 ------HTSDVNTVCFG-DESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMG--HLEGITFIDSRGDGRYLISNGKDQ 150 (303)
Q Consensus 80 ------h~~~v~~l~~~-~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~~~D~ 150 (303)
+...+.++.+. .+++++|++++.|++|++||++ ..+....+.+ |...|.++++++++++|++++.|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~----~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg 236 (437)
T 3gre_A 161 NLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIR----TLERLQIIENSPRHGAVSSICIDEECCVLILGTTRG 236 (437)
T ss_dssp EGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETT----TCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTS
T ss_pred EccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCC----CCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCC
Confidence 44556666532 2457899999999999999986 3345566766 889999999999999999999999
Q ss_pred cEEEEEcccccCCcccccCccceeeeceee----eCCCCCccccCCC-CCcceEEecccce-eeeEE-------------
Q 022074 151 AIKLWDIRKMSSNASCNLGFRSYEWDYRWM----DYPPQARDLKHPC-DQSVATYKGHSVL-RTLIR------------- 211 (303)
Q Consensus 151 ~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~------------- 211 (303)
.|++||++............. ..+..+ .+.++...+.... +..+..++-.... .....
T Consensus 237 ~i~iwd~~~~~~~~~~~~~~~---~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 313 (437)
T 3gre_A 237 IIDIWDIRFNVLIRSWSFGDH---APITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLP 313 (437)
T ss_dssp CEEEEETTTTEEEEEEBCTTC---EEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSC
T ss_pred eEEEEEcCCccEEEEEecCCC---CceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecc
Confidence 999999986443222211111 111122 1222222222221 2222222211100 00000
Q ss_pred -----------------EeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEeec------------------------
Q 022074 212 -----------------CHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKY------------------------ 250 (303)
Q Consensus 212 -----------------~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~------------------------ 250 (303)
......|+ ++++|++|+.|+.|++||+.+++.+..+.+
T Consensus 314 ~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (437)
T 3gre_A 314 IEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKM 392 (437)
T ss_dssp BCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEEC
T ss_pred cccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEec
Confidence 01122456 568999999999999999998876665554
Q ss_pred -------------CCCCeEEEEECCC--CCeEEEEeCCCCEEEee
Q 022074 251 -------------HTSPVRDCSWHPS--QPMLVSSSWDGDVVRWE 280 (303)
Q Consensus 251 -------------h~~~I~~v~~sp~--~~~las~s~Dg~i~~Wd 280 (303)
|...|++++|+++ +.+|+||+.||.|++|+
T Consensus 393 ~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 393 KRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp C-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred ccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 8899999999998 77999999999999995
No 67
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.97 E-value=2.6e-28 Score=224.35 Aligned_cols=226 Identities=25% Similarity=0.415 Sum_probs=181.8
Q ss_pred CchhhccccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEcc
Q 022074 12 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGD 91 (303)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~ 91 (303)
+|+.|..+.||+.-+|.... ...||+.+|.+++|++++ .+++|+.||+|++||+.+++....+.+|...|.+++|.+
T Consensus 137 sgs~dg~i~vwd~~~~~~~~--~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~ 213 (464)
T 3v7d_B 137 TGADDKMIRVYDSINKKFLL--QLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVE 213 (464)
T ss_dssp EEETTSCEEEEETTTTEEEE--EECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEE
T ss_pred EEcCCCcEEEEECCCCcEEE--EEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEec
Confidence 46778888999986665332 336999999999999988 999999999999999999998888889999999999975
Q ss_pred -CCCcEEEEecCCCeEEEEcCccccCCCc-------------------cceeecccccCeEEEEeCCCCCEEEEEeCCCc
Q 022074 92 -ESGHLIYSGSDDNLCKVWDRRCLNVKGK-------------------PAGVLMGHLEGITFIDSRGDGRYLISNGKDQA 151 (303)
Q Consensus 92 -~~~~~l~s~s~dg~v~lWd~~~~~~~~~-------------------~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~ 151 (303)
++++++++++.|++|++||++....... ....+.+|...+.++ +++++++++++.|+.
T Consensus 214 ~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~ 291 (464)
T 3v7d_B 214 YKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNT 291 (464)
T ss_dssp SSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSC
T ss_pred CCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCe
Confidence 4568999999999999999864321100 134567788888887 457889999999999
Q ss_pred EEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCC
Q 022074 152 IKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHD 231 (303)
Q Consensus 152 v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~d 231 (303)
|++||++.... +..+.+|.... ....++++++++++|+.|
T Consensus 292 i~vwd~~~~~~----------------------------------~~~~~~~~~~v------~~~~~~~~~~~l~sg~~d 331 (464)
T 3v7d_B 292 LIVWDVAQMKC----------------------------------LYILSGHTDRI------YSTIYDHERKRCISASMD 331 (464)
T ss_dssp EEEEETTTTEE----------------------------------EEEECCCSSCE------EEEEEETTTTEEEEEETT
T ss_pred EEEEECCCCcE----------------------------------EEEecCCCCCE------EEEEEcCCCCEEEEEeCC
Confidence 99999874321 11222222111 123467889999999999
Q ss_pred CeEEEEECCCCeEEEEeecCCCCeEEEEECCCCCeEEEEeCCCCEEEeecCCC
Q 022074 232 SCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 232 g~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~~ 284 (303)
|.|++||+.+++.+..+.+|..+|.+++|+ +++|++++.||++++||+...
T Consensus 332 g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~ 382 (464)
T 3v7d_B 332 TTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDY 382 (464)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTC
T ss_pred CcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCC
Confidence 999999999999999999999999999998 589999999999999998753
No 68
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=2.4e-28 Score=223.44 Aligned_cols=231 Identities=22% Similarity=0.319 Sum_probs=180.7
Q ss_pred CchhhccccccccccCc---------CcccccCCCcccceEEEEEcCCCC-EEEEeeCCCeEEEEECCCCce-------E
Q 022074 12 SGTMESLANVTEIHDGL---------DFSAADDGGYSFGIFSLKFSTDGR-ELVAGSSDDCIYVYDLEANKL-------S 74 (303)
Q Consensus 12 ~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~v~~l~~s~~g~-~l~sgs~Dg~v~lwd~~~~~~-------~ 74 (303)
+++.+..+.||++-+.. .. .....+|..+|.+++|+|+++ .|++|+.||+|++||+.++.. .
T Consensus 146 t~~~dg~V~vwd~~~~~~~~~~~~~~~~-~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 224 (430)
T 2xyi_A 146 TKTPSSDVLVFDYTKHPSKPEPSGECQP-DLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAK 224 (430)
T ss_dssp EECSSSCEEEEEGGGSCSSCCTTCCCCC-SEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECS
T ss_pred EECCCCcEEEEECCCcccccCccccCCC-cEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccc
Confidence 44556778888886521 11 122358999999999999998 999999999999999987421 2
Q ss_pred EEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCCCCC-EEEEEeCCCcEE
Q 022074 75 LRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGR-YLISNGKDQAIK 153 (303)
Q Consensus 75 ~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~D~~v~ 153 (303)
..+..|...|.+++|++.++.+|++++.|+.|++||++... ...+...+..|...|.+++|++++. ++++++.|+.|+
T Consensus 225 ~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~-~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~ 303 (430)
T 2xyi_A 225 NIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNN-TSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVA 303 (430)
T ss_dssp EEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSC-SSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEE
T ss_pred eeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCC-CCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEE
Confidence 45668999999999987678899999999999999987432 1244556678999999999999887 689999999999
Q ss_pred EEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCC-eEEEEEeCCC
Q 022074 154 LWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQ-KYIYTGSHDS 232 (303)
Q Consensus 154 lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-~~latg~~dg 232 (303)
+||++.... .+..+.+|.... ....|+|++ .+|++++.|+
T Consensus 304 vwd~~~~~~---------------------------------~~~~~~~h~~~v------~~i~~sp~~~~~l~s~~~d~ 344 (430)
T 2xyi_A 304 LWDLRNLKL---------------------------------KLHSFESHKDEI------FQVQWSPHNETILASSGTDR 344 (430)
T ss_dssp EEETTCTTS---------------------------------CSEEEECCSSCE------EEEEECSSCTTEEEEEETTS
T ss_pred EEeCCCCCC---------------------------------CeEEeecCCCCE------EEEEECCCCCCEEEEEeCCC
Confidence 999975321 122233332111 122356666 5799999999
Q ss_pred eEEEEECCC--------------CeEEEEeecCCCCeEEEEECCCCC-eEEEEeCCCCEEEeecCC
Q 022074 233 CVYVYDLVS--------------GEQVAALKYHTSPVRDCSWHPSQP-MLVSSSWDGDVVRWEFPG 283 (303)
Q Consensus 233 ~i~iwd~~~--------------~~~~~~~~~h~~~I~~v~~sp~~~-~las~s~Dg~i~~Wd~~~ 283 (303)
.|++||+.. .+.+..+.+|..+|++++|+|+++ +|++++.||.|++|++..
T Consensus 345 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 345 RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp CCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred cEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 999999976 356778889999999999999999 899999999999999864
No 69
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.97 E-value=1e-28 Score=218.26 Aligned_cols=247 Identities=16% Similarity=0.280 Sum_probs=172.2
Q ss_pred CCCcccceEEEEEcCCCCEE-EEeeC---CCeEEEEECCCCceEEE-EecccCCeEEEEEccCC--CcEEEEecCCCeEE
Q 022074 35 DGGYSFGIFSLKFSTDGREL-VAGSS---DDCIYVYDLEANKLSLR-ILAHTSDVNTVCFGDES--GHLIYSGSDDNLCK 107 (303)
Q Consensus 35 ~~~~~~~v~~l~~s~~g~~l-~sgs~---Dg~v~lwd~~~~~~~~~-~~~h~~~v~~l~~~~~~--~~~l~s~s~dg~v~ 107 (303)
..||..+|.+++|+|+++.+ ++|+. ||+|+|||+.+++.... ..+|...|.+++|+++. +++|++++.||.|+
T Consensus 14 ~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~ 93 (357)
T 3i2n_A 14 QKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLH 93 (357)
T ss_dssp EEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEE
T ss_pred ccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEE
Confidence 36799999999999999755 45665 99999999999876543 34788999999998753 68999999999999
Q ss_pred EEcCccccCCCccceeecccccCeEEEE------eCCCCCEEEEEeCCCcEEEEEccccc-CCcccccCccceeeeceee
Q 022074 108 VWDRRCLNVKGKPAGVLMGHLEGITFID------SRGDGRYLISNGKDQAIKLWDIRKMS-SNASCNLGFRSYEWDYRWM 180 (303)
Q Consensus 108 lWd~~~~~~~~~~~~~~~~h~~~v~~~~------~~~~~~~l~s~~~D~~v~lWdl~~~~-~~~~~~~~~~~~~~~~~~~ 180 (303)
+||+.... .+...+.+|...|.++. +++++++|++++.|+.|++||++... ...............+..+
T Consensus 94 iwd~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~ 170 (357)
T 3i2n_A 94 IWNLEAPE---MPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTV 170 (357)
T ss_dssp EECTTSCS---SCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEE
T ss_pred EEeCCCCC---ccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEE
Confidence 99986321 25667889999999984 57899999999999999999998654 2211111000000011111
Q ss_pred e----CCCCCccccCCC-CCcceEEecccceeeeEE----EeeeeeeeC---CCeEEEEEeCCCeEEEEECCCCeEEEEe
Q 022074 181 D----YPPQARDLKHPC-DQSVATYKGHSVLRTLIR----CHFSPVYST---GQKYIYTGSHDSCVYVYDLVSGEQVAAL 248 (303)
Q Consensus 181 ~----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~s~---~~~~latg~~dg~i~iwd~~~~~~~~~~ 248 (303)
. +.+....+.... +..+..++-......... ......|+| ++.++++|+.||.|++||+.+++.+..+
T Consensus 171 ~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 250 (357)
T 3i2n_A 171 AFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGF 250 (357)
T ss_dssp EEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEE
T ss_pred EEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccce
Confidence 1 333333332222 223333332211110001 112345777 8899999999999999999877644333
Q ss_pred -----ecCCCCeEEEEECCCCC-eEEEEeCCCCEEEeecCCC
Q 022074 249 -----KYHTSPVRDCSWHPSQP-MLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 249 -----~~h~~~I~~v~~sp~~~-~las~s~Dg~i~~Wd~~~~ 284 (303)
..|..+|++++|+|+++ +|++++.||.+++||+...
T Consensus 251 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 292 (357)
T 3i2n_A 251 ASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYP 292 (357)
T ss_dssp EEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECC
T ss_pred eeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCC
Confidence 48999999999999998 8999999999999998643
No 70
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.1e-28 Score=220.83 Aligned_cols=258 Identities=15% Similarity=0.142 Sum_probs=189.0
Q ss_pred chhhccccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCC---------
Q 022074 13 GTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSD--------- 83 (303)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~--------- 83 (303)
|+.+..+.||+ .+|... ....+|..+|.+++|+|++++|++++.|+.|++||+.+++....+..+...
T Consensus 126 ~~~dg~i~i~~-~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (425)
T 1r5m_A 126 GVENGELRLWN-KTGALL--NVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENH 202 (425)
T ss_dssp EETTSCEEEEE-TTSCEE--EEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC------------
T ss_pred EeCCCeEEEEe-CCCCee--eeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccc
Confidence 45567788887 444332 233689999999999999999999999999999999999887777777666
Q ss_pred ------eEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEc
Q 022074 84 ------VNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDI 157 (303)
Q Consensus 84 ------v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl 157 (303)
+.+++|+++ ..+++++.|+.|++||++. ..+...+.+|...|.++++++++++|++++.|+.|++||+
T Consensus 203 ~~~~~~~~~~~~~~~--~~~~~~~~~g~i~~~d~~~----~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~ 276 (425)
T 1r5m_A 203 SGDGSLGVDVEWVDD--DKFVIPGPKGAIFVYQITE----KTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHG 276 (425)
T ss_dssp ---CCCBSCCEEEET--TEEEEECGGGCEEEEETTC----SSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECS
T ss_pred cCCcceeeEEEEcCC--CEEEEEcCCCeEEEEEcCC----CceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEEC
Confidence 889999763 5688999999999999863 3456667789999999999999999999999999999998
Q ss_pred ccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccce-eeeEE----EeeeeeeeCCCeEEEEEeCCC
Q 022074 158 RKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVL-RTLIR----CHFSPVYSTGQKYIYTGSHDS 232 (303)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~s~~~~~latg~~dg 232 (303)
+.......... ....+..+.+.+....+....+..+..++-.... ..... ......|+|++++|++++.||
T Consensus 277 ~~~~~~~~~~~----~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 352 (425)
T 1r5m_A 277 GNGNSQNCFYG----HSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDG 352 (425)
T ss_dssp SSBSCSEEECC----CSSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTS
T ss_pred CCCccceEecC----CCccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCC
Confidence 86543322211 1111122233333311112222333333321110 00111 112345788999999999999
Q ss_pred eEEEEECCCCe--------------------EEEEeecCCC--CeEEEEECCCCCeEEEEeCCCCEEEeecCC
Q 022074 233 CVYVYDLVSGE--------------------QVAALKYHTS--PVRDCSWHPSQPMLVSSSWDGDVVRWEFPG 283 (303)
Q Consensus 233 ~i~iwd~~~~~--------------------~~~~~~~h~~--~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~ 283 (303)
.|++||+.+++ .+..+..|.. +|++++|+|++++|++++.||.|++|++++
T Consensus 353 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~g 425 (425)
T 1r5m_A 353 QVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIPG 425 (425)
T ss_dssp CEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECCC
T ss_pred eEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeecC
Confidence 99999999888 8888999976 999999999999999999999999999863
No 71
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.3e-29 Score=234.61 Aligned_cols=261 Identities=13% Similarity=0.053 Sum_probs=161.3
Q ss_pred ccCchhhccccccccccCcCcc---------cccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCc-eEEEEec
Q 022074 10 VGSGTMESLANVTEIHDGLDFS---------AADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANK-LSLRILA 79 (303)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~-~~~~~~~ 79 (303)
+-+|+.|..+.||++-++.... .....||+.+|.+++|+++ ..|++|+.||+|++||+.++. ....+.+
T Consensus 228 LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~ 306 (524)
T 2j04_B 228 LSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQV 306 (524)
T ss_dssp EEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEEC
T ss_pred EEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceEEeec
Confidence 3456778889999986664220 0134689999999999986 489999999999999998764 3345778
Q ss_pred ccCCeEEEE--EccCCC-cEEEEecCCCeEEEEcCccccCCCccceeeccccc--CeEEEEeCCCCCEEEEEeCCCcEEE
Q 022074 80 HTSDVNTVC--FGDESG-HLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLE--GITFIDSRGDGRYLISNGKDQAIKL 154 (303)
Q Consensus 80 h~~~v~~l~--~~~~~~-~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~--~v~~~~~~~~~~~l~s~~~D~~v~l 154 (303)
|...|.+++ | ++++ ++|+||+.|++|+|||++.. +....+.+|.. .|.+++|+|++..+++++.|++|++
T Consensus 307 H~~~V~sv~~~~-s~~g~~~laS~S~D~tvklWD~~~~----~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~l 381 (524)
T 2j04_B 307 HDSYILSVSTAY-SDFEDTVVSTVAVDGYFYIFNPKDI----ATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRA 381 (524)
T ss_dssp SSSCEEEEEEEC-CTTSCCEEEEEETTSEEEEECGGGH----HHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEE
T ss_pred ccccEEEEEEEc-CCCCCeEEEEeccCCeEEEEECCCC----CcccccccccccCcccceEeCCCcCeEEEeCCCCcEEE
Confidence 999999994 5 4555 89999999999999998632 23345556654 4788999999999999999999999
Q ss_pred EEcccccCCcccccCccceeeeceeeeCCCCCccccCCC-CCcceEEecccc-eeeeE---E-----EeeeeeeeCCCeE
Q 022074 155 WDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPC-DQSVATYKGHSV-LRTLI---R-----CHFSPVYSTGQKY 224 (303)
Q Consensus 155 Wdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~---~-----~~~~~~~s~~~~~ 224 (303)
||++........ ......+..+.+.|..+.+.... +..+..++-... ..... . ..+...|+|+++.
T Consensus 382 wd~~~~~~~~~l----~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~ 457 (524)
T 2j04_B 382 VPSRAAFAVHPL----VSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDK 457 (524)
T ss_dssp EETTCTTCCEEE----EECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCE
T ss_pred EECcccccceee----ecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCe
Confidence 999864321111 11111122233344333332211 112221111000 00000 0 1122334454442
Q ss_pred EEEEeCCCeEEEEECC-CCeEEEEeecCCCCeEEEEECCCCC---eEEEEeCCCCEEEeecCC
Q 022074 225 IYTGSHDSCVYVYDLV-SGEQVAALKYHTSPVRDCSWHPSQP---MLVSSSWDGDVVRWEFPG 283 (303)
Q Consensus 225 latg~~dg~i~iwd~~-~~~~~~~~~~h~~~I~~v~~sp~~~---~las~s~Dg~i~~Wd~~~ 283 (303)
+ ....+ .++|+.. ++..+..+.+|..+|++|+|||+++ +||+|+.||.|++|++..
T Consensus 458 ~-~~~~~--~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~ 517 (524)
T 2j04_B 458 Y-RIDSS--YEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSL 517 (524)
T ss_dssp E-EECCC--CCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSC
T ss_pred E-EccCC--ceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEccc
Confidence 2 11111 2222221 3445566778999999999999965 999999999999999875
No 72
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=5.7e-28 Score=217.09 Aligned_cols=257 Identities=20% Similarity=0.219 Sum_probs=176.6
Q ss_pred ccccccccccCcCcccccCCCcccceEEEEEcC-CCCEEEEeeCCCeEEEEECCCCceEEEEe-------------cccC
Q 022074 17 SLANVTEIHDGLDFSAADDGGYSFGIFSLKFST-DGRELVAGSSDDCIYVYDLEANKLSLRIL-------------AHTS 82 (303)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~-~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~-------------~h~~ 82 (303)
..+.||+.-.+... ....+|+.+|.+++|+| ++++|++|+.||+|++||+.++.....+. +|..
T Consensus 23 ~~~~v~~~~~~~~~--~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (408)
T 4a11_B 23 STRRVLGLELNKDR--DVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRY 100 (408)
T ss_dssp HHHHHHTEEECTTE--EECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSS
T ss_pred CcceeeccccCcce--eeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCC
Confidence 44456665333322 24478999999999999 99999999999999999999876433222 4889
Q ss_pred CeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCC---CCCEEEEEeCCCcEEEEEccc
Q 022074 83 DVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRG---DGRYLISNGKDQAIKLWDIRK 159 (303)
Q Consensus 83 ~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~---~~~~l~s~~~D~~v~lWdl~~ 159 (303)
.|.+++|++.++++|++++.|+.|++||++. ......+ .+...+..+.+.+ ++.++++++.|+.|++||++.
T Consensus 101 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~ 175 (408)
T 4a11_B 101 SVETVQWYPHDTGMFTSSSFDKTLKVWDTNT----LQTADVF-NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKS 175 (408)
T ss_dssp CEEEEEECTTCTTCEEEEETTSEEEEEETTT----TEEEEEE-ECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSS
T ss_pred cEEEEEEccCCCcEEEEEeCCCeEEEeeCCC----Cccceec-cCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCC
Confidence 9999999876788999999999999999862 2333333 3667788888877 445999999999999999986
Q ss_pred ccCCcccccCccceeeeceeeeCCCCCcc-ccC-CCCCcceEEecccce---------------------eeeEEEeeee
Q 022074 160 MSSNASCNLGFRSYEWDYRWMDYPPQARD-LKH-PCDQSVATYKGHSVL---------------------RTLIRCHFSP 216 (303)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~---------------------~~~~~~~~~~ 216 (303)
........ .....+..+.+.+.... +.. ..+..+..++-.... ..........
T Consensus 176 ~~~~~~~~----~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 251 (408)
T 4a11_B 176 GSCSHILQ----GHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGL 251 (408)
T ss_dssp SCCCEEEC----CCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEE
T ss_pred cceeeeec----CCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEE
Confidence 54332221 11112223334444332 211 112222222211000 0000011233
Q ss_pred eeeCCCeEEEEEeCCCeEEEEECCCC-----------------------------------------------eEEEEee
Q 022074 217 VYSTGQKYIYTGSHDSCVYVYDLVSG-----------------------------------------------EQVAALK 249 (303)
Q Consensus 217 ~~s~~~~~latg~~dg~i~iwd~~~~-----------------------------------------------~~~~~~~ 249 (303)
.|+|++++|++++.||.|++||+.++ +.+..+.
T Consensus 252 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~ 331 (408)
T 4a11_B 252 CFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLK 331 (408)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEEC
T ss_pred EEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeec
Confidence 46778888888888888888887643 4566777
Q ss_pred cCCCCeEEEEECCCCCeEEEEeCCCCEEEeecCCC
Q 022074 250 YHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 250 ~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~~ 284 (303)
+|..+|++++|+|++++|++++.||.|++||+...
T Consensus 332 ~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~ 366 (408)
T 4a11_B 332 GHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLY 366 (408)
T ss_dssp CCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC-
T ss_pred cCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCC
Confidence 89999999999999999999999999999998754
No 73
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.96 E-value=1.9e-28 Score=220.26 Aligned_cols=239 Identities=14% Similarity=0.168 Sum_probs=178.4
Q ss_pred CchhhccccccccccCcCcc---cccCCCc-----ccceEEEEEc----CCCCE-EEEeeCCCeEEEEECCC------Cc
Q 022074 12 SGTMESLANVTEIHDGLDFS---AADDGGY-----SFGIFSLKFS----TDGRE-LVAGSSDDCIYVYDLEA------NK 72 (303)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~-----~~~v~~l~~s----~~g~~-l~sgs~Dg~v~lwd~~~------~~ 72 (303)
+++.|..+.||+.-++.... .....+| ..+|.+++|+ |+++. +++++.||.|++||+.+ +.
T Consensus 86 s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 165 (397)
T 1sq9_A 86 TTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSL 165 (397)
T ss_dssp EEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHT
T ss_pred EEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccc
Confidence 45667888999987766410 1233567 6999999999 99999 99999999999999988 54
Q ss_pred eEE-----EE-------ecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCccceeecc---c---ccCeEEE
Q 022074 73 LSL-----RI-------LAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMG---H---LEGITFI 134 (303)
Q Consensus 73 ~~~-----~~-------~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~---h---~~~v~~~ 134 (303)
... .+ ..|...|.+++|+++ + .+++++.|+.|++||++ ...+...+.. | ...+.++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~-~l~~~~~dg~i~i~d~~----~~~~~~~~~~~~~h~~~~~~i~~i 239 (397)
T 1sq9_A 166 TLNWSPTLELQGTVESPMTPSQFATSVDISER-G-LIATGFNNGTVQISELS----TLRPLYNFESQHSMINNSNSIRSV 239 (397)
T ss_dssp TTCCCCEEEEEEEECCSSSSCCCCCEEEECTT-S-EEEEECTTSEEEEEETT----TTEEEEEEECCC---CCCCCEEEE
T ss_pred eeeccCcceeeeeeccccCCCCCceEEEECCC-c-eEEEEeCCCcEEEEECC----CCceeEEEeccccccccCCccceE
Confidence 443 45 348889999999764 6 99999999999999986 2345566777 8 8899999
Q ss_pred EeCCCCCEEEEEeCC---CcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEE
Q 022074 135 DSRGDGRYLISNGKD---QAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIR 211 (303)
Q Consensus 135 ~~~~~~~~l~s~~~D---~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (303)
++++++.+|++++.| +.|++||++......... .+.... ...+.. ..|... +
T Consensus 240 ~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~--------------~~~~~~------~~~~~~-~~~~~~--v-- 294 (397)
T 1sq9_A 240 KFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLS--------------VPTHSS------QASLGE-FAHSSW--V-- 294 (397)
T ss_dssp EECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEEC--------------BC--------------CC-BSBSSC--E--
T ss_pred EECCCCCEEEEEecCCCCceEEEEECCCCcccceec--------------cCcccc------cccccc-cccCCc--E--
Confidence 999999999999999 999999987532211100 000000 000000 001111 1
Q ss_pred EeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEee------cC---------------CCCeEEEEECCCC------
Q 022074 212 CHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALK------YH---------------TSPVRDCSWHPSQ------ 264 (303)
Q Consensus 212 ~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~------~h---------------~~~I~~v~~sp~~------ 264 (303)
....|+|++++|++++.||.|++||+.+++.+..+. .| ..+|++++|+|++
T Consensus 295 --~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~ 372 (397)
T 1sq9_A 295 --MSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMG 372 (397)
T ss_dssp --EEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTT
T ss_pred --EEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEecccccccccc
Confidence 123467889999999999999999999999999998 88 9999999999998
Q ss_pred ----CeEEEEeCCCCEEEeecCC
Q 022074 265 ----PMLVSSSWDGDVVRWEFPG 283 (303)
Q Consensus 265 ----~~las~s~Dg~i~~Wd~~~ 283 (303)
++|++++.||.|++|+++.
T Consensus 373 ~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 373 ADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp CTTSCEEEEEETTTEEEEEEEEC
T ss_pred ccccceEEEecCCCcEEEEEcCC
Confidence 7999999999999999864
No 74
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.7e-27 Score=210.95 Aligned_cols=263 Identities=17% Similarity=0.190 Sum_probs=193.9
Q ss_pred chhhccccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccC
Q 022074 13 GTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDE 92 (303)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~ 92 (303)
|+.|..+.||+.-+|... ....+|..+|.+++|+|++++|++++.||+|++||+.+++....+. |...+.+++|++
T Consensus 50 ~~~dg~i~vwd~~~~~~~--~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~- 125 (369)
T 3zwl_B 50 CSKDSSASVWYSLNGERL--GTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSP- 125 (369)
T ss_dssp EESSSCEEEEETTTCCEE--EEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECT-
T ss_pred EeCCCEEEEEeCCCchhh--hhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEcc-
Confidence 456778888887665533 2347899999999999999999999999999999999998776655 888999999975
Q ss_pred CCcEEEEecCC-----CeEEEEcCccccCC-------Cccceeeccccc--CeEEEEeCCCCCEEEEEeCCCcEEEEEcc
Q 022074 93 SGHLIYSGSDD-----NLCKVWDRRCLNVK-------GKPAGVLMGHLE--GITFIDSRGDGRYLISNGKDQAIKLWDIR 158 (303)
Q Consensus 93 ~~~~l~s~s~d-----g~v~lWd~~~~~~~-------~~~~~~~~~h~~--~v~~~~~~~~~~~l~s~~~D~~v~lWdl~ 158 (303)
+++.+++++.+ +.|++||++..... ..+...+..|.. .+.++++++++++|++++.|+.|++||++
T Consensus 126 ~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 205 (369)
T 3zwl_B 126 CGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVS 205 (369)
T ss_dssp TSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETT
T ss_pred CCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECC
Confidence 57899999988 99999997633211 123344556666 89999999999999999999999999997
Q ss_pred cc-cCCcccccCccceeeeceeeeCCCCCccccCCC-CCcceEEeccccee-eeEE---EeeeeeeeCCCeEEEEEeCCC
Q 022074 159 KM-SSNASCNLGFRSYEWDYRWMDYPPQARDLKHPC-DQSVATYKGHSVLR-TLIR---CHFSPVYSTGQKYIYTGSHDS 232 (303)
Q Consensus 159 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~---~~~~~~~s~~~~~latg~~dg 232 (303)
.. ....... .....+..+.+.++...+.... +..+..++-..... .... ......++|+++++++++.++
T Consensus 206 ~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 281 (369)
T 3zwl_B 206 NNYEYVDSID----LHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQE 281 (369)
T ss_dssp TTTEEEEEEE----CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC
T ss_pred CCcEeEEEEe----cCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCC
Confidence 52 2111111 1111222334444444333222 23333333221100 0000 112345788999999999988
Q ss_pred --------------eEEEEECCCCeEEEEeecCCCCeEEEEECCCCCeEEEEeCCCCEEEeecCC
Q 022074 233 --------------CVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPG 283 (303)
Q Consensus 233 --------------~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~ 283 (303)
.+++||..+++.+..+.+|..+|++++|+|++++|++++.||.|++|++..
T Consensus 282 ~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 282 AKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEK 346 (369)
T ss_dssp -------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECH
T ss_pred CceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECcc
Confidence 899999999999999999999999999999999999999999999999864
No 75
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.96 E-value=1.7e-28 Score=220.58 Aligned_cols=231 Identities=14% Similarity=0.156 Sum_probs=181.1
Q ss_pred CchhhccccccccccCcCc----ccccCCCcccceEEEEEcCC----C---CEEEEeeCCCeEEEEECCCCce-----EE
Q 022074 12 SGTMESLANVTEIHDGLDF----SAADDGGYSFGIFSLKFSTD----G---RELVAGSSDDCIYVYDLEANKL-----SL 75 (303)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~v~~l~~s~~----g---~~l~sgs~Dg~v~lwd~~~~~~-----~~ 75 (303)
+|+.|..+.||+.-++... ......+|..+|.+++|+|+ | ++|++++.||+|++||+.++.. ..
T Consensus 31 s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~ 110 (397)
T 1sq9_A 31 SCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFE 110 (397)
T ss_dssp EEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEE
T ss_pred EEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccce
Confidence 4566788899998766511 12233599999999999999 9 9999999999999999998875 66
Q ss_pred EEecc-----cCCeEEEEEc----cCCCcE-EEEecCCCeEEEEcCcc------ccCCC-ccceee-------cccccCe
Q 022074 76 RILAH-----TSDVNTVCFG----DESGHL-IYSGSDDNLCKVWDRRC------LNVKG-KPAGVL-------MGHLEGI 131 (303)
Q Consensus 76 ~~~~h-----~~~v~~l~~~----~~~~~~-l~s~s~dg~v~lWd~~~------~~~~~-~~~~~~-------~~h~~~v 131 (303)
.+..| ...|.+++|+ + +++. |++++.||.|++||++. ..... .+...+ ..|...+
T Consensus 111 ~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 189 (397)
T 1sq9_A 111 KLDLLDSDMKKHSFWALKWGASNDR-LLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFA 189 (397)
T ss_dssp EECCSCTTGGGSCEEEEEEECCC-----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCC
T ss_pred eecccccccCCCcEEEEEEeeccCC-CCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCc
Confidence 77788 5899999997 5 4677 99999999999999864 21111 111144 3478889
Q ss_pred EEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEec---c---cc
Q 022074 132 TFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKG---H---SV 205 (303)
Q Consensus 132 ~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~ 205 (303)
.++++++++ ++++++.|+.|++||++.... +..+.+ | ..
T Consensus 190 ~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~----------------------------------~~~~~~~~~h~~~~~ 234 (397)
T 1sq9_A 190 TSVDISERG-LIATGFNNGTVQISELSTLRP----------------------------------LYNFESQHSMINNSN 234 (397)
T ss_dssp CEEEECTTS-EEEEECTTSEEEEEETTTTEE----------------------------------EEEEECCC---CCCC
T ss_pred eEEEECCCc-eEEEEeCCCcEEEEECCCCce----------------------------------eEEEeccccccccCC
Confidence 999999999 999999999999999874221 111111 1 11
Q ss_pred eeeeEEEeeeeeeeCCCeEEEEEeCC---CeEEEEECCCCeEEEEeec-------------CCCCeEEEEECCCCCeEEE
Q 022074 206 LRTLIRCHFSPVYSTGQKYIYTGSHD---SCVYVYDLVSGEQVAALKY-------------HTSPVRDCSWHPSQPMLVS 269 (303)
Q Consensus 206 ~~~~~~~~~~~~~s~~~~~latg~~d---g~i~iwd~~~~~~~~~~~~-------------h~~~I~~v~~sp~~~~las 269 (303)
.. ....|+|++++|++++.| |.|++||+.+++.+..+.. |..+|.+++|+|++++|++
T Consensus 235 ~i------~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 308 (397)
T 1sq9_A 235 SI------RSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCS 308 (397)
T ss_dssp CE------EEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEE
T ss_pred cc------ceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEE
Confidence 11 123467889999999999 9999999999999999988 9999999999999999999
Q ss_pred EeCCCCEEEeecCCC
Q 022074 270 SSWDGDVVRWEFPGN 284 (303)
Q Consensus 270 ~s~Dg~i~~Wd~~~~ 284 (303)
++.||.|++||+...
T Consensus 309 ~~~dg~i~iwd~~~~ 323 (397)
T 1sq9_A 309 AGWDGKLRFWDVKTK 323 (397)
T ss_dssp EETTSEEEEEETTTT
T ss_pred EeCCCeEEEEEcCCC
Confidence 999999999998643
No 76
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.1e-27 Score=207.88 Aligned_cols=238 Identities=15% Similarity=0.195 Sum_probs=174.7
Q ss_pred cCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCcc
Q 022074 34 DDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRC 113 (303)
Q Consensus 34 ~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~ 113 (303)
...||+.+|.+++| ++++++++|+.||.|++||+.++.....+..|...|.+++|++ +++.+++++.|+.|++|++..
T Consensus 13 ~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~~~~~~ 90 (313)
T 3odt_A 13 TLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDS-EKELLLFGGKDTMINGVPLFA 90 (313)
T ss_dssp EECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEET-TTTEEEEEETTSCEEEEETTC
T ss_pred HhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECC-CCCEEEEecCCCeEEEEEeee
Confidence 34799999999999 9999999999999999999999988888889999999999976 578999999999999999864
Q ss_pred ccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeC-CCCCccccC-
Q 022074 114 LNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDY-PPQARDLKH- 191 (303)
Q Consensus 114 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~- 191 (303)
.. .......+.+|...|.++.+ +++++++++.|+.|++||...... ... .....+..+.+ ++....+..
T Consensus 91 ~~-~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d~~~~~~--~~~----~~~~~v~~~~~~~~~~~~l~~~ 161 (313)
T 3odt_A 91 TS-GEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWKEGSLVY--NLQ----AHNASVWDAKVVSFSENKFLTA 161 (313)
T ss_dssp CT-TSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTEEEE--EEE----CCSSCEEEEEEEETTTTEEEEE
T ss_pred cC-CCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEcCCcEEE--ecc----cCCCceeEEEEccCCCCEEEEE
Confidence 32 23456677889999999998 577999999999999999332111 000 00001111111 112222211
Q ss_pred CCCCcceEEecccceeeeE----EEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEECCCCCeE
Q 022074 192 PCDQSVATYKGHSVLRTLI----RCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPML 267 (303)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~~l 267 (303)
..+..+..++......... .......++++++ +++++.||.|++||+.+++.+..+..|..+|++++|+|++ .|
T Consensus 162 ~~d~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l 239 (313)
T 3odt_A 162 SADKTIKLWQNDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DI 239 (313)
T ss_dssp ETTSCEEEEETTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CE
T ss_pred ECCCCEEEEecCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CE
Confidence 1223333333211111100 0112234677887 8999999999999999999999999999999999999999 69
Q ss_pred EEEeCCCCEEEeecCCC
Q 022074 268 VSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 268 as~s~Dg~i~~Wd~~~~ 284 (303)
++++.||.+++||+...
T Consensus 240 ~~~~~dg~v~iwd~~~~ 256 (313)
T 3odt_A 240 VSCGEDRTVRIWSKENG 256 (313)
T ss_dssp EEEETTSEEEEECTTTC
T ss_pred EEEecCCEEEEEECCCC
Confidence 99999999999998654
No 77
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.7e-27 Score=206.60 Aligned_cols=219 Identities=19% Similarity=0.233 Sum_probs=175.8
Q ss_pred chhhccccccccccCcCcc-cccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEcc
Q 022074 13 GTMESLANVTEIHDGLDFS-AADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGD 91 (303)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~ 91 (303)
|+.|..+.+|++++..... .....+|..+|.+++| +++.+++++.||.|++|| .+.....+..|...+.+++|.+
T Consensus 77 ~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~ 152 (313)
T 3odt_A 77 GGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVS 152 (313)
T ss_dssp EETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEE
T ss_pred ecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEcc
Confidence 4566778888887765332 2234789999999999 578999999999999999 5666777888999999999987
Q ss_pred CCCcEEEEecCCCeEEEEcCccccCCCccceeecc-cccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCc
Q 022074 92 ESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMG-HLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGF 170 (303)
Q Consensus 92 ~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~ 170 (303)
.+++.+++++.|+.|++||.. .....+.. |...+.++.+++++. +++++.|+.|++||++....
T Consensus 153 ~~~~~l~~~~~d~~i~i~d~~------~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~-------- 217 (313)
T 3odt_A 153 FSENKFLTASADKTIKLWQND------KVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDV-------- 217 (313)
T ss_dssp TTTTEEEEEETTSCEEEEETT------EEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCE--------
T ss_pred CCCCEEEEEECCCCEEEEecC------ceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhh--------
Confidence 678899999999999999942 33445555 888999999999887 99999999999999874321
Q ss_pred cceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEeec
Q 022074 171 RSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKY 250 (303)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~ 250 (303)
+..+.+|.... ....|+|++ .+++++.||.|++||+.+++.+..+..
T Consensus 218 --------------------------~~~~~~~~~~i------~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~ 264 (313)
T 3odt_A 218 --------------------------LRTYEGHESFV------YCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITL 264 (313)
T ss_dssp --------------------------EEEEECCSSCE------EEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEEC
T ss_pred --------------------------hhhhhcCCceE------EEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEec
Confidence 11222222111 123467787 589999999999999999999999999
Q ss_pred CCCCeEEEEECCCCCeEEEEeCCCCEEEeecCCC
Q 022074 251 HTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 251 h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~~ 284 (303)
|..+|++++|+|+++ +++++.||.|++||+...
T Consensus 265 ~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~ 297 (313)
T 3odt_A 265 PAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKS 297 (313)
T ss_dssp SSSCEEEEEECTTSC-EEEEETTSCEEEEESCGG
T ss_pred cCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCC
Confidence 999999999999998 667999999999998754
No 78
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.96 E-value=7.8e-29 Score=223.90 Aligned_cols=229 Identities=15% Similarity=0.224 Sum_probs=179.7
Q ss_pred CchhhccccccccccCc------Ccc-cccCCCcccceEEEEEcCC-CCEEEEeeCCCeEEEEECCCCceEEEEecc---
Q 022074 12 SGTMESLANVTEIHDGL------DFS-AADDGGYSFGIFSLKFSTD-GRELVAGSSDDCIYVYDLEANKLSLRILAH--- 80 (303)
Q Consensus 12 ~~~~~~~~~~~~~~~~~------~~~-~~~~~~~~~~v~~l~~s~~-g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h--- 80 (303)
+++.|..+.||++-++. ... .....+|..+|.+++|+|+ +..+++++.||.|++||+.+++....+..|
T Consensus 131 s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~ 210 (416)
T 2pm9_A 131 SGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPN 210 (416)
T ss_dssp EECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCS
T ss_pred EEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccc
Confidence 34567788999987765 221 2233689999999999999 789999999999999999999887777666
Q ss_pred ---cCCeEEEEEccCCCcEEEEecCCC---eEEEEcCccccCCCccceeec-ccccCeEEEEeCC-CCCEEEEEeCCCcE
Q 022074 81 ---TSDVNTVCFGDESGHLIYSGSDDN---LCKVWDRRCLNVKGKPAGVLM-GHLEGITFIDSRG-DGRYLISNGKDQAI 152 (303)
Q Consensus 81 ---~~~v~~l~~~~~~~~~l~s~s~dg---~v~lWd~~~~~~~~~~~~~~~-~h~~~v~~~~~~~-~~~~l~s~~~D~~v 152 (303)
...|.+++|+|+...++++++.|+ .|++||++.. ..+...+. +|...|.+++|+| ++.+|++++.|+.|
T Consensus 211 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~---~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v 287 (416)
T 2pm9_A 211 SGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNA---NTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTV 287 (416)
T ss_dssp SCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTST---TSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEE
T ss_pred cccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCC---CCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCE
Confidence 788999999876567999999999 9999998632 23455666 8999999999999 89999999999999
Q ss_pred EEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCC-eEEEEEeCC
Q 022074 153 KLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQ-KYIYTGSHD 231 (303)
Q Consensus 153 ~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-~~latg~~d 231 (303)
++||++.... +..+.+|.... ....|+|++ ++|++++.|
T Consensus 288 ~~wd~~~~~~----------------------------------~~~~~~~~~~v------~~~~~s~~~~~~l~s~~~d 327 (416)
T 2pm9_A 288 LLWNPESAEQ----------------------------------LSQFPARGNWC------FKTKFAPEAPDLFACASFD 327 (416)
T ss_dssp EEECSSSCCE----------------------------------EEEEECSSSCC------CCEEECTTCTTEEEECCSS
T ss_pred EEeeCCCCcc----------------------------------ceeecCCCCce------EEEEECCCCCCEEEEEecC
Confidence 9999864321 12222222111 123467887 899999999
Q ss_pred CeEEEEECCCCeEEEEee-----------------------------------cCCCCeEEEEECCCCCeEEEEeCCCCE
Q 022074 232 SCVYVYDLVSGEQVAALK-----------------------------------YHTSPVRDCSWHPSQPMLVSSSWDGDV 276 (303)
Q Consensus 232 g~i~iwd~~~~~~~~~~~-----------------------------------~h~~~I~~v~~sp~~~~las~s~Dg~i 276 (303)
+.|++||+.+++...... .|..++++++|||+|++|++++.|++|
T Consensus 328 ~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v 407 (416)
T 2pm9_A 328 NKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGV 407 (416)
T ss_dssp SEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCB
T ss_pred CcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeE
Confidence 999999998765321111 167788999999999999999999999
Q ss_pred EEeecCC
Q 022074 277 VRWEFPG 283 (303)
Q Consensus 277 ~~Wd~~~ 283 (303)
++|++..
T Consensus 408 ~~w~~~~ 414 (416)
T 2pm9_A 408 SITNPKI 414 (416)
T ss_dssp CCBCCCC
T ss_pred EEEEecc
Confidence 9999864
No 79
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.96 E-value=1e-27 Score=234.71 Aligned_cols=240 Identities=21% Similarity=0.260 Sum_probs=182.2
Q ss_pred CCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCcccc
Q 022074 36 GGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLN 115 (303)
Q Consensus 36 ~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~ 115 (303)
.||..+|.+++|+|+|+++++|+.||+|+|||+.+++....+..|...|.+++|+| ++++|++++.||.|++||..
T Consensus 10 ~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vw~~~--- 85 (814)
T 3mkq_A 10 SNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIA-RKNWIIVGSDDFRIRVFNYN--- 85 (814)
T ss_dssp EEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEG-GGTEEEEEETTSEEEEEETT---
T ss_pred ecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeC-CCCEEEEEeCCCeEEEEECC---
Confidence 68999999999999999999999999999999999998888889999999999976 57899999999999999975
Q ss_pred CCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCC-CCccccCC-C
Q 022074 116 VKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPP-QARDLKHP-C 193 (303)
Q Consensus 116 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~ 193 (303)
.++....+.+|.+.|.+++|+|++++|++++.|+.|++||++........ +......+..+.+.| ....+... .
T Consensus 86 -~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~---~~~~~~~v~~~~~~p~~~~~l~~~~~ 161 (814)
T 3mkq_A 86 -TGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQT---FEGHEHFVMCVAFNPKDPSTFASGCL 161 (814)
T ss_dssp -TCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEE---EECCSSCEEEEEEETTEEEEEEEEET
T ss_pred -CCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEE---EcCCCCcEEEEEEEcCCCCEEEEEeC
Confidence 34556678889999999999999999999999999999998753111000 000011111222222 22222111 1
Q ss_pred CCcceEEecccc--eeeeE----EEeeeeeeeC--CCeEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEECCCCC
Q 022074 194 DQSVATYKGHSV--LRTLI----RCHFSPVYST--GQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQP 265 (303)
Q Consensus 194 ~~~~~~~~~~~~--~~~~~----~~~~~~~~s~--~~~~latg~~dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~ 265 (303)
+..+..++-... ..... .......++| ++.++++++.||.|++||..+++.+..+.+|..+|.+++|+|+++
T Consensus 162 dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~ 241 (814)
T 3mkq_A 162 DRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLP 241 (814)
T ss_dssp TSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSS
T ss_pred CCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCC
Confidence 222333221100 00000 0112234566 899999999999999999999999999999999999999999999
Q ss_pred eEEEEeCCCCEEEeecCC
Q 022074 266 MLVSSSWDGDVVRWEFPG 283 (303)
Q Consensus 266 ~las~s~Dg~i~~Wd~~~ 283 (303)
+|++++.||.+++||...
T Consensus 242 ~l~~~~~dg~v~vwd~~~ 259 (814)
T 3mkq_A 242 IIISGSEDGTLKIWNSST 259 (814)
T ss_dssp EEEEEETTSCEEEEETTT
T ss_pred EEEEEeCCCeEEEEECCC
Confidence 999999999999999865
No 80
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.96 E-value=7.9e-28 Score=219.48 Aligned_cols=216 Identities=15% Similarity=0.263 Sum_probs=162.0
Q ss_pred cCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCc-----------eEEEEeccc------------CCeEEEEEc
Q 022074 34 DDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANK-----------LSLRILAHT------------SDVNTVCFG 90 (303)
Q Consensus 34 ~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~-----------~~~~~~~h~------------~~v~~l~~~ 90 (303)
++-.|..+|.+++|+|+|++|++|+.||.|+|||+.++. ....+.+|. +.|.+++|+
T Consensus 23 ~~~~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~ 102 (447)
T 3dw8_B 23 DDVAEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWL 102 (447)
T ss_dssp SCCCGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEEC
T ss_pred ccccccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEc
Confidence 335678899999999999999999999999999998876 356778898 889999998
Q ss_pred cCCC-cEEEEecCCCeEEEEcCccccCC----------C-------------------------cccee-ecccccCeEE
Q 022074 91 DESG-HLIYSGSDDNLCKVWDRRCLNVK----------G-------------------------KPAGV-LMGHLEGITF 133 (303)
Q Consensus 91 ~~~~-~~l~s~s~dg~v~lWd~~~~~~~----------~-------------------------~~~~~-~~~h~~~v~~ 133 (303)
++.. ..|++++.|++|++||+...... + .+... ..+|...|.+
T Consensus 103 ~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 182 (447)
T 3dw8_B 103 PQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINS 182 (447)
T ss_dssp CCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCE
T ss_pred CCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEE
Confidence 6532 68999999999999997531110 0 00112 3579999999
Q ss_pred EEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEe
Q 022074 134 IDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCH 213 (303)
Q Consensus 134 ~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (303)
+++++++++|+++ .|+.|++||++...... ......+ ..+.+|....
T Consensus 183 ~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~-------------~~~~~~~-------------~~~~~~~~~v------ 229 (447)
T 3dw8_B 183 ISINSDYETYLSA-DDLRINLWHLEITDRSF-------------NIVDIKP-------------ANMEELTEVI------ 229 (447)
T ss_dssp EEECTTSSEEEEE-CSSEEEEEETTEEEEEE-------------EEEECCC-------------SSGGGCCCCE------
T ss_pred EEEcCCCCEEEEe-CCCeEEEEECCCCCcee-------------eeeeccc-------------ccccccCcce------
Confidence 9999999999998 79999999987321000 0000000 0111222111
Q ss_pred eeeeeeCCC-eEEEEEeCCCeEEEEECCCCeE----EEEeecCCC------------CeEEEEECCCCCeEEEEeCCCCE
Q 022074 214 FSPVYSTGQ-KYIYTGSHDSCVYVYDLVSGEQ----VAALKYHTS------------PVRDCSWHPSQPMLVSSSWDGDV 276 (303)
Q Consensus 214 ~~~~~s~~~-~~latg~~dg~i~iwd~~~~~~----~~~~~~h~~------------~I~~v~~sp~~~~las~s~Dg~i 276 (303)
....|+|++ ++|++|+.||.|++||+++++. +..+..|.. +|++++|+|++++|++++. +.+
T Consensus 230 ~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v 308 (447)
T 3dw8_B 230 TAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSV 308 (447)
T ss_dssp EEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEE
T ss_pred EEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeE
Confidence 123467787 8999999999999999998886 678888876 8999999999999999999 999
Q ss_pred EEeecCC
Q 022074 277 VRWEFPG 283 (303)
Q Consensus 277 ~~Wd~~~ 283 (303)
++||+..
T Consensus 309 ~iwd~~~ 315 (447)
T 3dw8_B 309 KVWDLNM 315 (447)
T ss_dssp EEEETTC
T ss_pred EEEeCCC
Confidence 9999875
No 81
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.96 E-value=3.2e-27 Score=206.82 Aligned_cols=240 Identities=15% Similarity=0.183 Sum_probs=176.9
Q ss_pred CCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceE---EEEe--cccCCeEEEEEccCCCcEEEEecCCCeEEEEc
Q 022074 36 GGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLS---LRIL--AHTSDVNTVCFGDESGHLIYSGSDDNLCKVWD 110 (303)
Q Consensus 36 ~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~---~~~~--~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd 110 (303)
.+|..+|.+++|+|+++++++++ ||.|++||+.++... ..+. .|...|.+++|++ +++++++++.|+.|++||
T Consensus 48 ~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d 125 (337)
T 1gxr_A 48 LNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLP-DGCTLIVGGEASTLSIWD 125 (337)
T ss_dssp ECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECT-TSSEEEEEESSSEEEEEE
T ss_pred ccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcC-CCCEEEEEcCCCcEEEEE
Confidence 48999999999999999999998 999999999876522 2222 7889999999975 578999999999999999
Q ss_pred CccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCcccc
Q 022074 111 RRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLK 190 (303)
Q Consensus 111 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (303)
++.. .......+.+|...+.++.++++++++++++.|+.|++||++......... .....+..+.+.++...+.
T Consensus 126 ~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~----~~~~~i~~~~~~~~~~~l~ 199 (337)
T 1gxr_A 126 LAAP--TPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ----GHTDGASCIDISNDGTKLW 199 (337)
T ss_dssp CCCC----EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC----CCSSCEEEEEECTTSSEEE
T ss_pred CCCC--CcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeee----cccCceEEEEECCCCCEEE
Confidence 8632 112345567888999999999999999999999999999997643222111 1111122334444443333
Q ss_pred CC-CCCcceEEecccceee-eEE---EeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEECCCCC
Q 022074 191 HP-CDQSVATYKGHSVLRT-LIR---CHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQP 265 (303)
Q Consensus 191 ~~-~~~~~~~~~~~~~~~~-~~~---~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~ 265 (303)
.. .+..+..++-...... ... ......++|+++++++++.|+.|++||+.+++. ..+..|..+|.+++|+|+++
T Consensus 200 ~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~ 278 (337)
T 1gxr_A 200 TGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK-YQLHLHESCVLSLKFAYCGK 278 (337)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCE-EEECCCSSCEEEEEECTTSS
T ss_pred EEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCe-EEEcCCccceeEEEECCCCC
Confidence 22 2223333332211100 000 112345789999999999999999999998775 45678999999999999999
Q ss_pred eEEEEeCCCCEEEeecCCC
Q 022074 266 MLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 266 ~las~s~Dg~i~~Wd~~~~ 284 (303)
+|++++.||.+++||+...
T Consensus 279 ~l~~~~~dg~i~~~~~~~~ 297 (337)
T 1gxr_A 279 WFVSTGKDNLLNAWRTPYG 297 (337)
T ss_dssp EEEEEETTSEEEEEETTTC
T ss_pred EEEEecCCCcEEEEECCCC
Confidence 9999999999999998754
No 82
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=4.6e-28 Score=236.54 Aligned_cols=234 Identities=17% Similarity=0.226 Sum_probs=182.9
Q ss_pred CchhhccccccccccCcCcccccCCCcccceEEEEEcCC--CCEEEEeeCCCeEEEEECCCCc--eEEEEecccCCeEEE
Q 022074 12 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD--GRELVAGSSDDCIYVYDLEANK--LSLRILAHTSDVNTV 87 (303)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~--g~~l~sgs~Dg~v~lwd~~~~~--~~~~~~~h~~~v~~l 87 (303)
+|+.|..+.||+.-.+.........||+.+|.+++|+++ ++.+++|+.||+|++||+.+++ ....+..|...|.++
T Consensus 26 tg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v 105 (753)
T 3jro_A 26 TCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSV 105 (753)
T ss_dssp EEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEE
T ss_pred EEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEE
Confidence 356678899998753322223344799999999999988 9999999999999999999986 455677899999999
Q ss_pred EEccCC-CcEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCC-------------CCCEEEEEeCCCcEE
Q 022074 88 CFGDES-GHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRG-------------DGRYLISNGKDQAIK 153 (303)
Q Consensus 88 ~~~~~~-~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~-------------~~~~l~s~~~D~~v~ 153 (303)
+|+|+. ++.+++|+.||+|++||++... ......+.+|...|.++.++| ++.++++++.|+.|+
T Consensus 106 ~~sp~~~~~~l~sgs~dg~I~vwdl~~~~--~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~ 183 (753)
T 3jro_A 106 QWAPHEYGPLLLVASSDGKVSVVEFKENG--TTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVK 183 (753)
T ss_dssp EECCGGGCSEEEEEETTSEEEEEECCSSS--CCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEE
T ss_pred EECCCCCCCEEEEEeCCCcEEEEEeecCC--CcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEE
Confidence 997642 7899999999999999986432 223445678999999999999 589999999999999
Q ss_pred EEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCC---CeEEEEEeC
Q 022074 154 LWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTG---QKYIYTGSH 230 (303)
Q Consensus 154 lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~---~~~latg~~ 230 (303)
+||++....... ....+.+|.... ....|+|+ ++++++|+.
T Consensus 184 iwd~~~~~~~~~------------------------------~~~~~~~h~~~V------~~l~~sp~~~~~~~l~s~s~ 227 (753)
T 3jro_A 184 IWKYNSDAQTYV------------------------------LESTLEGHSDWV------RDVAWSPTVLLRSYLASVSQ 227 (753)
T ss_dssp EEEEETTTTEEE------------------------------EEEEECCCSSCE------EEEEECCCCSSSEEEEEEES
T ss_pred EEeccCCcccce------------------------------eeeeecCCCCcE------EEEEeccCCCCCCEEEEEec
Confidence 999975321100 112223332211 12346778 899999999
Q ss_pred CCeEEEEECCCCe-----EEEEeecCCCCeEEEEECCCCCeEEEEeCCCCEEEeecCC
Q 022074 231 DSCVYVYDLVSGE-----QVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPG 283 (303)
Q Consensus 231 dg~i~iwd~~~~~-----~~~~~~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~ 283 (303)
||.|++||+.+++ .+.....|..+|++++|+|++++|++++.||.|++|++..
T Consensus 228 Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 228 DRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp SSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred CCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 9999999998864 2333346889999999999999999999999999999874
No 83
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=8e-28 Score=234.82 Aligned_cols=214 Identities=20% Similarity=0.288 Sum_probs=166.8
Q ss_pred CCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCC--CceEEEEecccCCeEEEEEccCC-CcEEEEecCCCeEEEEcC
Q 022074 35 DGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEA--NKLSLRILAHTSDVNTVCFGDES-GHLIYSGSDDNLCKVWDR 111 (303)
Q Consensus 35 ~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~--~~~~~~~~~h~~~v~~l~~~~~~-~~~l~s~s~dg~v~lWd~ 111 (303)
..||+.+|.+++|+|+|+++++|+.||+|+|||+.+ +.....+.+|.+.|.+++|+++. ++.|++|+.||+|++||+
T Consensus 5 l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~ 84 (753)
T 3jro_A 5 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKE 84 (753)
T ss_dssp ---CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEE
T ss_pred cccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEEC
Confidence 479999999999999999999999999999999984 45556778899999999997542 789999999999999997
Q ss_pred ccccCCCccceeecccccCeEEEEeCCC--CCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccc
Q 022074 112 RCLNVKGKPAGVLMGHLEGITFIDSRGD--GRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDL 189 (303)
Q Consensus 112 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (303)
+.. .......+.+|...|.++.++|+ ++++++++.|+.|++||++.......
T Consensus 85 ~~~--~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~------------------------ 138 (753)
T 3jro_A 85 ENG--RWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSP------------------------ 138 (753)
T ss_dssp ETT--EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCC------------------------
T ss_pred CCC--cccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcce------------------------
Confidence 632 11245567789999999999999 99999999999999999975421110
Q ss_pred cCCCCCcceEEecccceeeeEEEeeee---------eeeCCCeEEEEEeCCCeEEEEECCCC----eEEEEeecCCCCeE
Q 022074 190 KHPCDQSVATYKGHSVLRTLIRCHFSP---------VYSTGQKYIYTGSHDSCVYVYDLVSG----EQVAALKYHTSPVR 256 (303)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~s~~~~~latg~~dg~i~iwd~~~~----~~~~~~~~h~~~I~ 256 (303)
..+.+|......+ .+.| ...+++.++++|+.||.|++||+.++ ..+..+.+|..+|+
T Consensus 139 --------~~~~~~~~~v~~l--~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~ 208 (753)
T 3jro_A 139 --------IIIDAHAIGVNSA--SWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVR 208 (753)
T ss_dssp --------EEEECCSSCEEEE--EECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEE
T ss_pred --------eEeecCCCceEEE--EecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEE
Confidence 0111111111111 1111 01125789999999999999999876 55667889999999
Q ss_pred EEEECCC---CCeEEEEeCCCCEEEeecCCC
Q 022074 257 DCSWHPS---QPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 257 ~v~~sp~---~~~las~s~Dg~i~~Wd~~~~ 284 (303)
+++|+|+ +++|++++.||.|++||+...
T Consensus 209 ~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 209 DVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 239 (753)
T ss_dssp EEEECCCCSSSEEEEEEESSSCEEEEEESSS
T ss_pred EEEeccCCCCCCEEEEEecCCEEEEecCCCC
Confidence 9999999 899999999999999998754
No 84
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.96 E-value=2.6e-27 Score=217.71 Aligned_cols=224 Identities=23% Similarity=0.392 Sum_probs=170.2
Q ss_pred cCCCcccce-EEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCc
Q 022074 34 DDGGYSFGI-FSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRR 112 (303)
Q Consensus 34 ~~~~~~~~v-~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~ 112 (303)
...||..++ .++.+ +++++++|+.||+|++||+.+++....+.+|.+.|.+++|+++ + .+++|+.||+|++||++
T Consensus 116 ~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~-~-~l~s~s~dg~i~vwd~~ 191 (464)
T 3v7d_B 116 TLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG-G-ILVSGSTDRTVRVWDIK 191 (464)
T ss_dssp EEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECST-T-EEEEEETTSCEEEEETT
T ss_pred EEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCC-C-EEEEEeCCCCEEEEECC
Confidence 336898886 55555 5789999999999999999999988889999999999999653 3 89999999999999986
Q ss_pred cccCCCccceeecccccCeEEEEeC--CCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCcccc
Q 022074 113 CLNVKGKPAGVLMGHLEGITFIDSR--GDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLK 190 (303)
Q Consensus 113 ~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (303)
.+.....+.+|...|.++++. +++.++++++.|++|++||++............ ........+..
T Consensus 192 ----~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~-----~~~~~~~~~~~---- 258 (464)
T 3v7d_B 192 ----KGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEH-----DYPLVFHTPEE---- 258 (464)
T ss_dssp ----TTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------C-----CSSEEESCGGG----
T ss_pred ----CCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccC-----CcceEeeccCC----
Confidence 344566788899999999887 577899999999999999998643221110000 00000000000
Q ss_pred CCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEECCCCCeEEEE
Q 022074 191 HPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSS 270 (303)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~~las~ 270 (303)
....+..+.+|..... .+++++.++++|+.||.|++||+.+++.+..+.+|..+|.+++|+|++++|+++
T Consensus 259 --~~~~~~~~~~~~~~v~--------~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg 328 (464)
T 3v7d_B 259 --NPYFVGVLRGHMASVR--------TVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISA 328 (464)
T ss_dssp --CTTEEEEECCCSSCEE--------EEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEE
T ss_pred --CeEEEEEccCccceEE--------EEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEE
Confidence 0011223334432211 124568899999999999999999999999999999999999999999999999
Q ss_pred eCCCCEEEeecCCC
Q 022074 271 SWDGDVVRWEFPGN 284 (303)
Q Consensus 271 s~Dg~i~~Wd~~~~ 284 (303)
+.||.|++||+...
T Consensus 329 ~~dg~i~vwd~~~~ 342 (464)
T 3v7d_B 329 SMDTTIRIWDLENG 342 (464)
T ss_dssp ETTSCEEEEETTTT
T ss_pred eCCCcEEEEECCCC
Confidence 99999999998643
No 85
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=8.5e-28 Score=210.24 Aligned_cols=200 Identities=13% Similarity=0.134 Sum_probs=141.9
Q ss_pred ceEEEEEcCC----CCEEEEeeC--------------------CCeEEEEEC-CCCceEEEEecccCCeEEEEEcc--CC
Q 022074 41 GIFSLKFSTD----GRELVAGSS--------------------DDCIYVYDL-EANKLSLRILAHTSDVNTVCFGD--ES 93 (303)
Q Consensus 41 ~v~~l~~s~~----g~~l~sgs~--------------------Dg~v~lwd~-~~~~~~~~~~~h~~~v~~l~~~~--~~ 93 (303)
.|.+++|+|| ++++++++. |++|++|++ ++++....+..|...+..++|++ .+
T Consensus 113 ~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~ 192 (356)
T 2w18_A 113 EIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGM 192 (356)
T ss_dssp EEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETS
T ss_pred ceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCC
Confidence 5677777778 777777653 888999999 55777777778888888888865 24
Q ss_pred CcEEEEecCCCeEEEEcCccccCCCccceeecccc---cCeEEEEeCCCCCEE------------EEEeCCCcEEEEEcc
Q 022074 94 GHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHL---EGITFIDSRGDGRYL------------ISNGKDQAIKLWDIR 158 (303)
Q Consensus 94 ~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~---~~v~~~~~~~~~~~l------------~s~~~D~~v~lWdl~ 158 (303)
+++|+|++.|++|++||++ +++....+.+|. ..+.+++|+|+|.++ ++|+.|++|++||..
T Consensus 193 ~~~LaSgS~D~TIkIWDl~----TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~ 268 (356)
T 2w18_A 193 QEALLGTTIMNNIVIWNLK----TGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPK 268 (356)
T ss_dssp TTEEEEEETTSEEEEEETT----TCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETT
T ss_pred CceEEEecCCCcEEEEECC----CCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECC
Confidence 6899999999999999986 345566666543 467778899999876 568889999999986
Q ss_pred cccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEE
Q 022074 159 KMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYD 238 (303)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd 238 (303)
..+..... . ..+ | +||... .+. ..+ ++.++|+|+.|++|+|||
T Consensus 269 tgk~l~v~-------~-----~~~-p----------------~Gh~~~--~ls----g~~--sg~~lASgS~DgTIkIWD 311 (356)
T 2w18_A 269 TTLSVGVM-------L-----YCL-P----------------PGQAGR--FLE----GDV--KDHCAAAILTSGTIAIWD 311 (356)
T ss_dssp TTEEEEEE-------E-----ECC-C----------------TTCCCC--EEE----EEE--ETTEEEEEETTSCEEEEE
T ss_pred CCEEEEEE-------E-----eec-c----------------CCCcce--eEc----ccc--CCCEEEEEcCCCcEEEEE
Confidence 43211000 0 000 0 111100 011 111 266899999999999999
Q ss_pred CCCCeEEEEeecCCCCeE-EEEECCCCCeEEEEeCCCCEEEeec
Q 022074 239 LVSGEQVAALKYHTSPVR-DCSWHPSQPMLVSSSWDGDVVRWEF 281 (303)
Q Consensus 239 ~~~~~~~~~~~~h~~~I~-~v~~sp~~~~las~s~Dg~i~~Wd~ 281 (303)
+.+++.+.++++|...+. .++||||+++|+||+.|++|++||+
T Consensus 312 l~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 312 LLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp TTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 999999999999987665 5899999999999999999999995
No 86
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.96 E-value=2.4e-27 Score=210.80 Aligned_cols=230 Identities=16% Similarity=0.153 Sum_probs=174.8
Q ss_pred CchhhccccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCce---EEE-EecccCCeEEE
Q 022074 12 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKL---SLR-ILAHTSDVNTV 87 (303)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~---~~~-~~~h~~~v~~l 87 (303)
+++.|..+.||+.-++.........+|..+|.+++|+|+++++++++.|+.|++||+..+.. ... ...|...|.++
T Consensus 69 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~ 148 (372)
T 1k8k_C 69 TCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSL 148 (372)
T ss_dssp EEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEE
T ss_pred EEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEE
Confidence 34567788899885554222233478999999999999999999999999999999988762 222 35688999999
Q ss_pred EEccCCCcEEEEecCCCeEEEEcCcccc--------------CCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEE
Q 022074 88 CFGDESGHLIYSGSDDNLCKVWDRRCLN--------------VKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIK 153 (303)
Q Consensus 88 ~~~~~~~~~l~s~s~dg~v~lWd~~~~~--------------~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~ 153 (303)
+|++ ++++|++++.|+.|++||++... ........+.+|...+.++.+++++++|++++.|+.|+
T Consensus 149 ~~~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 227 (372)
T 1k8k_C 149 DWHP-NSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVC 227 (372)
T ss_dssp EECT-TSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEE
T ss_pred EEcC-CCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEE
Confidence 9975 57899999999999999964211 12344556678999999999999999999999999999
Q ss_pred EEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCe
Q 022074 154 LWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSC 233 (303)
Q Consensus 154 lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~ 233 (303)
+||++.... +..+.++.... ....|+++++++++| .|+.
T Consensus 228 i~d~~~~~~----------------------------------~~~~~~~~~~v------~~~~~~~~~~~l~~~-~d~~ 266 (372)
T 1k8k_C 228 LADADKKMA----------------------------------VATLASETLPL------LAVTFITESSLVAAG-HDCF 266 (372)
T ss_dssp EEEGGGTTE----------------------------------EEEEECSSCCE------EEEEEEETTEEEEEE-TTSS
T ss_pred EEECCCCce----------------------------------eEEEccCCCCe------EEEEEecCCCEEEEE-eCCe
Confidence 999875321 11122221111 123366788888877 9999
Q ss_pred EEEEECCC--CeE--------------------------------E------EEe-ecCCCCeEEEEEC-CCC---CeEE
Q 022074 234 VYVYDLVS--GEQ--------------------------------V------AAL-KYHTSPVRDCSWH-PSQ---PMLV 268 (303)
Q Consensus 234 i~iwd~~~--~~~--------------------------------~------~~~-~~h~~~I~~v~~s-p~~---~~la 268 (303)
|++||+.+ ++. . ..+ .+|..+|++++|+ +++ ++|+
T Consensus 267 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~ 346 (372)
T 1k8k_C 267 PVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFC 346 (372)
T ss_dssp CEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEE
T ss_pred EEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEE
Confidence 99999987 421 0 223 3899999999976 666 9999
Q ss_pred EEeCCCCEEEeecCC
Q 022074 269 SSSWDGDVVRWEFPG 283 (303)
Q Consensus 269 s~s~Dg~i~~Wd~~~ 283 (303)
|++.||.|++|++..
T Consensus 347 s~~~Dg~i~~W~~~~ 361 (372)
T 1k8k_C 347 TTGMDGGMSIWDVRS 361 (372)
T ss_dssp EEETTSEEEEEEHHH
T ss_pred EecCCCceEEEEecC
Confidence 999999999999864
No 87
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.1e-26 Score=207.75 Aligned_cols=241 Identities=15% Similarity=0.201 Sum_probs=168.9
Q ss_pred CCcccceEEEEEcCCCC-EEEEeeCCCeEEEEEC----CCCc------eEEEEec----------ccCCeEEEEEccCCC
Q 022074 36 GGYSFGIFSLKFSTDGR-ELVAGSSDDCIYVYDL----EANK------LSLRILA----------HTSDVNTVCFGDESG 94 (303)
Q Consensus 36 ~~~~~~v~~l~~s~~g~-~l~sgs~Dg~v~lwd~----~~~~------~~~~~~~----------h~~~v~~l~~~~~~~ 94 (303)
..|..+|.+++|+|+|+ +|++|+.||.|++||+ .+++ ....+.. |...|.+++|++ ++
T Consensus 42 ~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~ 120 (425)
T 1r5m_A 42 IVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSH-DG 120 (425)
T ss_dssp EEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECT-TS
T ss_pred eeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcC-CC
Confidence 45668999999999999 9999999999999999 8887 3444443 677999999975 58
Q ss_pred cEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccC-----
Q 022074 95 HLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLG----- 169 (303)
Q Consensus 95 ~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~----- 169 (303)
++|++++.||.|++||. .......+.+|...|.++.+++++++|++++.|+.|++||++...........
T Consensus 121 ~~l~~~~~dg~i~i~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 195 (425)
T 1r5m_A 121 NSIVTGVENGELRLWNK-----TGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGS 195 (425)
T ss_dssp SEEEEEETTSCEEEEET-----TSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC-----
T ss_pred CEEEEEeCCCeEEEEeC-----CCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCcc
Confidence 89999999999999993 34556678889999999999999999999999999999998753221111000
Q ss_pred -------------cccee------------------eec----------------eeeeCCCCCccccCCC-CCcceEEe
Q 022074 170 -------------FRSYE------------------WDY----------------RWMDYPPQARDLKHPC-DQSVATYK 201 (303)
Q Consensus 170 -------------~~~~~------------------~~~----------------~~~~~~~~~~~~~~~~-~~~~~~~~ 201 (303)
..... |+. ..+.+.+....+.... +..+..++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d 275 (425)
T 1r5m_A 196 SINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWH 275 (425)
T ss_dssp ----------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEC
T ss_pred ceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEE
Confidence 00000 000 0111111111111110 11111121
Q ss_pred cccc-eeeeEE----EeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEECCCCCeEEEEeCCCCE
Q 022074 202 GHSV-LRTLIR----CHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDV 276 (303)
Q Consensus 202 ~~~~-~~~~~~----~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~~las~s~Dg~i 276 (303)
-... ...... ......+++++ ++++++.|+.|++||+.+++.+..+..|..+|.+++|+|++++|++++.||.|
T Consensus 276 ~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i 354 (425)
T 1r5m_A 276 GGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQV 354 (425)
T ss_dssp SSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeE
Confidence 1100 000000 11234477888 89999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCC
Q 022074 277 VRWEFPG 283 (303)
Q Consensus 277 ~~Wd~~~ 283 (303)
++||+..
T Consensus 355 ~i~~~~~ 361 (425)
T 1r5m_A 355 NVYDLKK 361 (425)
T ss_dssp EEEECHH
T ss_pred EEEECCC
Confidence 9999864
No 88
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.96 E-value=2.8e-27 Score=215.85 Aligned_cols=263 Identities=13% Similarity=0.178 Sum_probs=178.6
Q ss_pred CchhhccccccccccCcCcc---------cccCCCcc------------cceEEEEEcCCC--CEEEEeeCCCeEEEEEC
Q 022074 12 SGTMESLANVTEIHDGLDFS---------AADDGGYS------------FGIFSLKFSTDG--RELVAGSSDDCIYVYDL 68 (303)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~------------~~v~~l~~s~~g--~~l~sgs~Dg~v~lwd~ 68 (303)
+|+.|..+.||+.-++.... .....||+ .+|.+++|+|++ ..+++++.|++|++||+
T Consensus 45 ~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~ 124 (447)
T 3dw8_B 45 TGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKI 124 (447)
T ss_dssp EEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEE
T ss_pred EEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEec
Confidence 45677889999987665210 12235898 889999999998 79999999999999999
Q ss_pred CCCceE---------------------------------------EE-EecccCCeEEEEEccCCCcEEEEecCCCeEEE
Q 022074 69 EANKLS---------------------------------------LR-ILAHTSDVNTVCFGDESGHLIYSGSDDNLCKV 108 (303)
Q Consensus 69 ~~~~~~---------------------------------------~~-~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~l 108 (303)
.++... .. ..+|...|.+++|++ ++++|++| .|++|++
T Consensus 125 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~-~d~~i~i 202 (447)
T 3dw8_B 125 SERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINS-DYETYLSA-DDLRINL 202 (447)
T ss_dssp EEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECT-TSSEEEEE-CSSEEEE
T ss_pred ccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcC-CCCEEEEe-CCCeEEE
Confidence 764431 11 357999999999976 57899998 7999999
Q ss_pred EcCccccCCCccce-------eecccccCeEEEEeCCCC-CEEEEEeCCCcEEEEEcccccCC----cccccCcc-----
Q 022074 109 WDRRCLNVKGKPAG-------VLMGHLEGITFIDSRGDG-RYLISNGKDQAIKLWDIRKMSSN----ASCNLGFR----- 171 (303)
Q Consensus 109 Wd~~~~~~~~~~~~-------~~~~h~~~v~~~~~~~~~-~~l~s~~~D~~v~lWdl~~~~~~----~~~~~~~~----- 171 (303)
||++... .... .+.+|...|.+++|+|++ ++|++++.|+.|++||++..... ........
T Consensus 203 wd~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 279 (447)
T 3dw8_B 203 WHLEITD---RSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRS 279 (447)
T ss_dssp EETTEEE---EEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CC
T ss_pred EECCCCC---ceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccc
Confidence 9986211 1111 356899999999999998 99999999999999999875431 11111000
Q ss_pred ---ceeeeceeeeCCCCCccccCCCCCcceEE------------ecccceee---------eEEEeeeeeeeCCCeEEEE
Q 022074 172 ---SYEWDYRWMDYPPQARDLKHPCDQSVATY------------KGHSVLRT---------LIRCHFSPVYSTGQKYIYT 227 (303)
Q Consensus 172 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~---------~~~~~~~~~~s~~~~~lat 227 (303)
.....+..+.+.+....+.......+..+ .+|..... .+...+...|+|++++|++
T Consensus 280 ~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s 359 (447)
T 3dw8_B 280 FFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMT 359 (447)
T ss_dssp HHHHHTTCEEEEEECTTSSEEEEEESSEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEE
T ss_pred cccccCceEEEEEECCCCCEEEEeeCCeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEE
Confidence 00002233445555444433222223323 22221100 0000112468899999999
Q ss_pred EeCCCeEEEEECCCCeEEEEeecC---------------------------------CCCeEEEEECCCCCeEEEEeCCC
Q 022074 228 GSHDSCVYVYDLVSGEQVAALKYH---------------------------------TSPVRDCSWHPSQPMLVSSSWDG 274 (303)
Q Consensus 228 g~~dg~i~iwd~~~~~~~~~~~~h---------------------------------~~~I~~v~~sp~~~~las~s~Dg 274 (303)
|+.||.|++||+.+++.+ .++.| ..+|.+++|||++++||+++.|+
T Consensus 360 ~s~dg~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~ 438 (447)
T 3dw8_B 360 GSYNNFFRMFDRNTKRDI-TLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNN 438 (447)
T ss_dssp ECSTTEEEEEETTTCCEE-EEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC
T ss_pred eccCCEEEEEEcCCCcce-eeeecccccccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecce
Confidence 999999999999998765 33333 35789999999999999998775
Q ss_pred CEEEeec
Q 022074 275 DVVRWEF 281 (303)
Q Consensus 275 ~i~~Wd~ 281 (303)
+.+|..
T Consensus 439 -~~~~~~ 444 (447)
T 3dw8_B 439 -LYIFQD 444 (447)
T ss_dssp -EEEEEC
T ss_pred -eeeecc
Confidence 777764
No 89
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.96 E-value=1.1e-26 Score=212.29 Aligned_cols=218 Identities=23% Similarity=0.412 Sum_probs=175.5
Q ss_pred CchhhccccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEcc
Q 022074 12 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGD 91 (303)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~ 91 (303)
+|+.|..+.||+.-+|... ....||..+|.+++| +++.+++|+.||+|++||+.+++....+..|...|.+++|+
T Consensus 148 ~g~~dg~i~iwd~~~~~~~--~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~- 222 (435)
T 1p22_A 148 SGLRDNTIKIWDKNTLECK--RILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN- 222 (435)
T ss_dssp EEESSSCEEEEESSSCCEE--EEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC-
T ss_pred EEeCCCeEEEEeCCCCeEE--EEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc-
Confidence 4566788889988665432 234799999999999 78899999999999999999999888899999999999995
Q ss_pred CCCcEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCcc
Q 022074 92 ESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFR 171 (303)
Q Consensus 92 ~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~ 171 (303)
++.+++|+.||+|++||++.... ......+.+|...|.++++ +++++++++.|+.|++||++....
T Consensus 223 --~~~l~s~s~dg~i~vwd~~~~~~-~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~--------- 288 (435)
T 1p22_A 223 --NGMMVTCSKDRSIAVWDMASPTD-ITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEF--------- 288 (435)
T ss_dssp --TTEEEEEETTSCEEEEECSSSSC-CEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCE---------
T ss_pred --CCEEEEeeCCCcEEEEeCCCCCC-ceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcE---------
Confidence 35899999999999999863221 1122567789999999988 778999999999999999875321
Q ss_pred ceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEeecC
Q 022074 172 SYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYH 251 (303)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~h 251 (303)
+..+.+|......+ .+ ++.++++|+.||.|++||+.+++.+..+.+|
T Consensus 289 -------------------------~~~~~~~~~~v~~~------~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h 335 (435)
T 1p22_A 289 -------------------------VRTLNGHKRGIACL------QY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGH 335 (435)
T ss_dssp -------------------------EEEEECCSSCEEEE------EE--ETTEEEEEETTSCEEEEETTTCCEEEEECCC
T ss_pred -------------------------EEEEcCCCCcEEEE------Ee--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCC
Confidence 11222222111111 12 3678999999999999999999999999999
Q ss_pred CCCeEEEEECCCCCeEEEEeCCCCEEEeecCC
Q 022074 252 TSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPG 283 (303)
Q Consensus 252 ~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~ 283 (303)
..+|.+++| ++++|++|+.||.|++||+..
T Consensus 336 ~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~ 365 (435)
T 1p22_A 336 EELVRCIRF--DNKRIVSGAYDGKIKVWDLVA 365 (435)
T ss_dssp SSCEEEEEC--CSSEEEEEETTSCEEEEEHHH
T ss_pred cCcEEEEEe--cCCEEEEEeCCCcEEEEECCC
Confidence 999999999 788999999999999999853
No 90
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=5.7e-27 Score=232.71 Aligned_cols=211 Identities=15% Similarity=0.174 Sum_probs=162.7
Q ss_pred CCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCcccc
Q 022074 36 GGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLN 115 (303)
Q Consensus 36 ~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~ 115 (303)
.||...|.+++|+|++++||+|+.||+|+||+..+..... ...|...|.+++|++ +++|++++.|++|++||++.
T Consensus 14 ~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~-~~~~~~~V~~l~fsp--g~~L~S~s~D~~v~lWd~~~-- 88 (902)
T 2oaj_A 14 YGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVI-KLEDRSAIKEMRFVK--GIYLVVINAKDTVYVLSLYS-- 88 (902)
T ss_dssp EECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEE-ECSSCCCEEEEEEET--TTEEEEEETTCEEEEEETTT--
T ss_pred cCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEE-EcCCCCCEEEEEEcC--CCEEEEEECcCeEEEEECCC--
Confidence 5899999999999999999999999999999998776543 345788999999986 66999999999999999862
Q ss_pred CCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCC
Q 022074 116 VKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQ 195 (303)
Q Consensus 116 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (303)
++....+. |...|++++++|++++|++|+.|++|++||++..... .+...... .
T Consensus 89 --~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~----------~~~i~~~~-----~-------- 142 (902)
T 2oaj_A 89 --QKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLS----------SFKLDNLQ-----K-------- 142 (902)
T ss_dssp --CSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEE----------EEEECCHH-----H--------
T ss_pred --CcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccc----------cceecccc-----c--------
Confidence 33344443 6678999999999999999999999999998753210 00000000 0
Q ss_pred cceEEecccceeeeEEEeeeeeeeCC-CeEEEEEeCCCeEEEEECCCCeEEEEeecC------------------CCCeE
Q 022074 196 SVATYKGHSVLRTLIRCHFSPVYSTG-QKYIYTGSHDSCVYVYDLVSGEQVAALKYH------------------TSPVR 256 (303)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~s~~-~~~latg~~dg~i~iwd~~~~~~~~~~~~h------------------~~~I~ 256 (303)
......+|.... .+..|+|+ +..+++|+.||.| +||+++++.+..+..| ..+|+
T Consensus 143 ~~~~~~~h~~~V------~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~ 215 (902)
T 2oaj_A 143 SSFFPAARLSPI------VSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVI 215 (902)
T ss_dssp HHTCSSSCCCCC------CEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEE
T ss_pred cccccccCCCCe------EEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeE
Confidence 000011221111 12346664 5789999999999 9999999988887765 57899
Q ss_pred EEEECCCCCeEEEEeCCCCEEEeecCCC
Q 022074 257 DCSWHPSQPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 257 ~v~~sp~~~~las~s~Dg~i~~Wd~~~~ 284 (303)
+++|+|++++|||++.||+|++||+...
T Consensus 216 ~v~fspdg~~lasgs~Dg~i~lWd~~~g 243 (902)
T 2oaj_A 216 QSLYHPNSLHIITIHEDNSLVFWDANSG 243 (902)
T ss_dssp EEEECTTSSEEEEEETTCCEEEEETTTC
T ss_pred EEEEcCCCCEEEEEECCCeEEEEECCCC
Confidence 9999999999999999999999998653
No 91
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.95 E-value=8.3e-27 Score=213.19 Aligned_cols=211 Identities=17% Similarity=0.287 Sum_probs=167.1
Q ss_pred CCcccceEEEEEcCC-CCEEEEeeCCCeEEEEECCC----------CceEEEEecccCCeEEEEEccCCCcEEEEecCCC
Q 022074 36 GGYSFGIFSLKFSTD-GRELVAGSSDDCIYVYDLEA----------NKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDN 104 (303)
Q Consensus 36 ~~~~~~v~~l~~s~~-g~~l~sgs~Dg~v~lwd~~~----------~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg 104 (303)
.+|..+|.+++|+|+ +.++++++.||.|++||+.+ ......+.+|...|.+++|++....+|++|+.||
T Consensus 125 ~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg 204 (430)
T 2xyi_A 125 INHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDH 204 (430)
T ss_dssp EEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTS
T ss_pred EcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCC
Confidence 478899999999997 67999999999999999986 4556678899999999999875444999999999
Q ss_pred eEEEEcCccccCCC---ccceeecccccCeEEEEeCC-CCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceee
Q 022074 105 LCKVWDRRCLNVKG---KPAGVLMGHLEGITFIDSRG-DGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWM 180 (303)
Q Consensus 105 ~v~lWd~~~~~~~~---~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~ 180 (303)
+|++||++...... .+...+.+|...|.+++|++ ++.+|++++.|+.|++||++.....
T Consensus 205 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~----------------- 267 (430)
T 2xyi_A 205 TICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTS----------------- 267 (430)
T ss_dssp CEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSS-----------------
T ss_pred eEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCC-----------------
Confidence 99999986421111 12455678999999999999 6789999999999999999853210
Q ss_pred eCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCe-EEEEEeCCCeEEEEECCC-CeEEEEeecCCCCeEEE
Q 022074 181 DYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQK-YIYTGSHDSCVYVYDLVS-GEQVAALKYHTSPVRDC 258 (303)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~latg~~dg~i~iwd~~~-~~~~~~~~~h~~~I~~v 258 (303)
..+..+..|.... ....|+|+++ ++++|+.||.|++||+++ ++.+..+..|..+|+++
T Consensus 268 --------------~~~~~~~~~~~~v------~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i 327 (430)
T 2xyi_A 268 --------------KPSHTVDAHTAEV------NCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQV 327 (430)
T ss_dssp --------------SCSEEEECCSSCE------EEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEE
T ss_pred --------------cceeEeecCCCCe------EEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEE
Confidence 0111222222111 1233667665 799999999999999987 45688888999999999
Q ss_pred EECCCCC-eEEEEeCCCCEEEeecCC
Q 022074 259 SWHPSQP-MLVSSSWDGDVVRWEFPG 283 (303)
Q Consensus 259 ~~sp~~~-~las~s~Dg~i~~Wd~~~ 283 (303)
+|+|+++ +|++++.|+.|++||+..
T Consensus 328 ~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 328 QWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp EECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred EECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 9999996 699999999999999875
No 92
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.95 E-value=4.5e-27 Score=208.19 Aligned_cols=243 Identities=14% Similarity=0.162 Sum_probs=172.5
Q ss_pred CCCcccceEEEEEcCC----CCEEEEeeCCCeEEEEECCCCceEEEEec-----ccCCeEEEEEccCC---CcEEEEecC
Q 022074 35 DGGYSFGIFSLKFSTD----GRELVAGSSDDCIYVYDLEANKLSLRILA-----HTSDVNTVCFGDES---GHLIYSGSD 102 (303)
Q Consensus 35 ~~~~~~~v~~l~~s~~----g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~-----h~~~v~~l~~~~~~---~~~l~s~s~ 102 (303)
..||+.+|.+++|+|+ ...+++++.++.|++||+.+++....+.. |...|.+++|+++. +++|++|+.
T Consensus 14 ~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~ 93 (366)
T 3k26_A 14 KEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGS 93 (366)
T ss_dssp ECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEET
T ss_pred ecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecC
Confidence 4699999999999984 45677777788999999998776555543 55789999998653 468999999
Q ss_pred CCeEEEEcCccccCCCccceeecccccCeEEEEeCC-CCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeee
Q 022074 103 DNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRG-DGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMD 181 (303)
Q Consensus 103 dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~ 181 (303)
||+|++||+. ..+....+.+|...|.++.|+| ++++|++++.|+.|++||++.......... .......+..+.
T Consensus 94 dg~i~v~d~~----~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~~~~~v~~~~ 168 (366)
T 3k26_A 94 RGIIRIINPI----TMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGG-VEGHRDEVLSAD 168 (366)
T ss_dssp TCEEEEECTT----TCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECS-TTSCSSCEEEEE
T ss_pred CCEEEEEEch----hceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecc-cccccCceeEEE
Confidence 9999999975 3455667888999999999999 899999999999999999976432222100 011111222333
Q ss_pred CCCCCccccCC-CCCcceEEeccccee-----------------------------e----eEEEeeeeeeeCCCeEEEE
Q 022074 182 YPPQARDLKHP-CDQSVATYKGHSVLR-----------------------------T----LIRCHFSPVYSTGQKYIYT 227 (303)
Q Consensus 182 ~~~~~~~~~~~-~~~~~~~~~~~~~~~-----------------------------~----~~~~~~~~~~s~~~~~lat 227 (303)
+.+....+... .+..+..++-..... . .........|+ +.++++
T Consensus 169 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~ 246 (366)
T 3k26_A 169 YDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILS 246 (366)
T ss_dssp ECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEE
T ss_pred ECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEE
Confidence 44443333222 122333322110000 0 00000112234 678999
Q ss_pred EeCCCeEEEEECCCCe--------------EEEEeecCCCCeEEEEECCC--CCeEEEEeCCCCEEEeecCCC
Q 022074 228 GSHDSCVYVYDLVSGE--------------QVAALKYHTSPVRDCSWHPS--QPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 228 g~~dg~i~iwd~~~~~--------------~~~~~~~h~~~I~~v~~sp~--~~~las~s~Dg~i~~Wd~~~~ 284 (303)
++.|+.|++||+.+++ .+..+..|..+|++++|+|+ +++|++++.||.|++||+...
T Consensus 247 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~ 319 (366)
T 3k26_A 247 KSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVE 319 (366)
T ss_dssp ECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSS
T ss_pred EecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCC
Confidence 9999999999998763 37788899999999999999 999999999999999998764
No 93
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.95 E-value=3.9e-27 Score=214.88 Aligned_cols=207 Identities=13% Similarity=0.120 Sum_probs=157.6
Q ss_pred CCcccceEEEEEcC-CCCEEEEeeCCCeEEEEECCC---CceE--EEEecccCCeEEEEEccCCCcEEEEecCCCeEEEE
Q 022074 36 GGYSFGIFSLKFST-DGRELVAGSSDDCIYVYDLEA---NKLS--LRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVW 109 (303)
Q Consensus 36 ~~~~~~v~~l~~s~-~g~~l~sgs~Dg~v~lwd~~~---~~~~--~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lW 109 (303)
.||+.+|.+++|+| ++++|++|+.||+|+|||+.+ +... .....|...|.+++|++ +++.|++++.||+|++|
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~dg~i~vw 138 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIP-NFDAFAVSSKDGQIIVL 138 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECT-TSSEEEEEETTSEEEEE
T ss_pred cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeC-CCCEEEEEeCCCEEEEE
Confidence 78999999999999 999999999999999999976 4311 12236899999999975 67899999999999999
Q ss_pred cCccccCCCccceeecc------------cccCeEEEE--eCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceee
Q 022074 110 DRRCLNVKGKPAGVLMG------------HLEGITFID--SRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEW 175 (303)
Q Consensus 110 d~~~~~~~~~~~~~~~~------------h~~~v~~~~--~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~ 175 (303)
|+... ..+.....+.+ +...+.++. +++++.+|++++.|+.|++||++....
T Consensus 139 d~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~------------- 204 (437)
T 3gre_A 139 KVNHY-QQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLER------------- 204 (437)
T ss_dssp EEEEE-EETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCE-------------
T ss_pred Eeccc-cCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCee-------------
Confidence 97411 01111111111 344566665 567899999999999999999875321
Q ss_pred eceeeeCCCCCccccCCCCCcceEEec--ccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEee-cCC
Q 022074 176 DYRWMDYPPQARDLKHPCDQSVATYKG--HSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALK-YHT 252 (303)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~-~h~ 252 (303)
+..+.+ |.... ....|+|++++|++|+.||.|++||+++++.+..+. .|.
T Consensus 205 ---------------------~~~~~~~~h~~~v------~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 257 (437)
T 3gre_A 205 ---------------------LQIIENSPRHGAV------SSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDH 257 (437)
T ss_dssp ---------------------EEEEECCGGGCCE------EEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTC
T ss_pred ---------------------eEEEccCCCCCce------EEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCC
Confidence 112222 11111 123467889999999999999999999999988876 788
Q ss_pred CCeEEEEEC----CCCCeEEEEeCCCCEEEeecCCC
Q 022074 253 SPVRDCSWH----PSQPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 253 ~~I~~v~~s----p~~~~las~s~Dg~i~~Wd~~~~ 284 (303)
.+|++++|+ |++++|++++.||.|++||+...
T Consensus 258 ~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 293 (437)
T 3gre_A 258 APITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKG 293 (437)
T ss_dssp EEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTT
T ss_pred CceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCC
Confidence 899999655 56789999999999999998744
No 94
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.95 E-value=9.8e-27 Score=212.75 Aligned_cols=216 Identities=27% Similarity=0.414 Sum_probs=170.8
Q ss_pred CchhhccccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceE---EEEecccCCeEEEE
Q 022074 12 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLS---LRILAHTSDVNTVC 88 (303)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~---~~~~~h~~~v~~l~ 88 (303)
+|+.|..+.||+.-+|... ....+|..+|.+++|++ +.+++|+.||+|++||+.++... ..+.+|...|.++.
T Consensus 188 sg~~dg~i~vwd~~~~~~~--~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~ 263 (435)
T 1p22_A 188 TGSSDSTVRVWDVNTGEML--NTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVD 263 (435)
T ss_dssp EEETTSCEEEEESSSCCEE--EEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEE
T ss_pred EEcCCCeEEEEECCCCcEE--EEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEE
Confidence 4567888999998776533 23368999999999974 59999999999999999887644 55678999999999
Q ss_pred EccCCCcEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCccccc
Q 022074 89 FGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNL 168 (303)
Q Consensus 89 ~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~ 168 (303)
| +++.+++|+.||+|++||++ .......+.+|...|.++.+ +++++++++.|+.|++||++....
T Consensus 264 ~---~~~~l~s~~~dg~i~vwd~~----~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~------ 328 (435)
T 1p22_A 264 F---DDKYIVSASGDRTIKVWNTS----TCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGAC------ 328 (435)
T ss_dssp E---ETTEEEEEETTSEEEEEETT----TCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCE------
T ss_pred e---CCCEEEEEeCCCeEEEEECC----cCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCE------
Confidence 9 35799999999999999986 34556678889999999988 467999999999999999874321
Q ss_pred CccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCe-----
Q 022074 169 GFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGE----- 243 (303)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~----- 243 (303)
+..+.+|......+ ..++.+|++|+.||.|++||+.+++
T Consensus 329 ----------------------------~~~~~~h~~~v~~~--------~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~ 372 (435)
T 1p22_A 329 ----------------------------LRVLEGHEELVRCI--------RFDNKRIVSGAYDGKIKVWDLVAALDPRAP 372 (435)
T ss_dssp ----------------------------EEEECCCSSCEEEE--------ECCSSEEEEEETTSCEEEEEHHHHTSTTSC
T ss_pred ----------------------------EEEEeCCcCcEEEE--------EecCCEEEEEeCCCcEEEEECCCCCCcccc
Confidence 12222332211111 1257899999999999999997665
Q ss_pred ----EEEEeecCCCCeEEEEECCCCCeEEEEeCCCCEEEeecCCC
Q 022074 244 ----QVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 244 ----~~~~~~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~~ 284 (303)
.+..+.+|..+|++++| ++++|++++.||+|++||+...
T Consensus 373 ~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~ 415 (435)
T 1p22_A 373 AGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLND 415 (435)
T ss_dssp TTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC----
T ss_pred ccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCC
Confidence 78888999999999999 7889999999999999998754
No 95
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=7e-26 Score=208.05 Aligned_cols=204 Identities=14% Similarity=0.189 Sum_probs=163.3
Q ss_pred CcccceEEEEEcCCCCEE-EEeeCCCeEEEEECC--CCceEEEEe--cccCCeEEEEEccCCCcEEEEecCCCeEEEEcC
Q 022074 37 GYSFGIFSLKFSTDGREL-VAGSSDDCIYVYDLE--ANKLSLRIL--AHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDR 111 (303)
Q Consensus 37 ~~~~~v~~l~~s~~g~~l-~sgs~Dg~v~lwd~~--~~~~~~~~~--~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~ 111 (303)
+|...|.+++|+|+|++| ++|+.||+|+|||+. ++.....+. .|...|.+++|+| ++++|++|+.+|.|++|++
T Consensus 100 ~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~~g~v~~~~~ 178 (450)
T 2vdu_B 100 PIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAE-DDTTVIIADKFGDVYSIDI 178 (450)
T ss_dssp CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECT-TSSEEEEEETTSEEEEEET
T ss_pred ccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcC-CCCEEEEEeCCCcEEEEec
Confidence 677789999999999996 899999999999998 777666555 5678999999975 5789999999999999998
Q ss_pred ccccCCCccceeecccccCeEEEEeCCC---CCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCcc
Q 022074 112 RCLNVKGKPAGVLMGHLEGITFIDSRGD---GRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARD 188 (303)
Q Consensus 112 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~---~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (303)
............+.+|...|.+++|+|+ +.+|++++.|+.|++||++.......
T Consensus 179 ~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~----------------------- 235 (450)
T 2vdu_B 179 NSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDK----------------------- 235 (450)
T ss_dssp TSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEE-----------------------
T ss_pred CCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeee-----------------------
Confidence 6432221133467789999999999999 99999999999999999864321100
Q ss_pred ccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEeecC-----------------
Q 022074 189 LKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYH----------------- 251 (303)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~h----------------- 251 (303)
.+.+|.... ....|+ ++++|++|+.|+.|++||+.+++.+..+..+
T Consensus 236 ----------~~~~h~~~v------~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (450)
T 2vdu_B 236 ----------WLFGHKHFV------SSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRF 298 (450)
T ss_dssp ----------ECCCCSSCE------EEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----
T ss_pred ----------eecCCCCce------EEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccc
Confidence 011222111 123467 8999999999999999999999988777632
Q ss_pred --------CCCeEEEEECCCCCeEEEEe-CCCCEEEeec
Q 022074 252 --------TSPVRDCSWHPSQPMLVSSS-WDGDVVRWEF 281 (303)
Q Consensus 252 --------~~~I~~v~~sp~~~~las~s-~Dg~i~~Wd~ 281 (303)
...|.+++|+|++++|++++ .|+.|++|++
T Consensus 299 ~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 299 QNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp ------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred cccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 35799999999999999999 8999999998
No 96
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.95 E-value=7.8e-26 Score=231.22 Aligned_cols=240 Identities=19% Similarity=0.281 Sum_probs=185.5
Q ss_pred CCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccc
Q 022074 35 DGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCL 114 (303)
Q Consensus 35 ~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~ 114 (303)
..||..+|.+++|+|+|+++++|+.||+|++||+.+++....+.+|...|.+++|+| +++++++++.|++|++||+.
T Consensus 611 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~~~d~~v~vwd~~-- 687 (1249)
T 3sfz_A 611 VRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSS-DDSYIATCSADKKVKIWDSA-- 687 (1249)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETT--
T ss_pred EecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEec-CCCEEEEEeCCCeEEEEECC--
Confidence 369999999999999999999999999999999999998888999999999999975 57899999999999999986
Q ss_pred cCCCccceeecccccCeEEEEeCC--CCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCC
Q 022074 115 NVKGKPAGVLMGHLEGITFIDSRG--DGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHP 192 (303)
Q Consensus 115 ~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (303)
+++....+.+|...|.++.|++ ++.++++++.|+.|++||++........ ......+..+.+.++...+...
T Consensus 688 --~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~----~~h~~~v~~~~~sp~~~~l~s~ 761 (1249)
T 3sfz_A 688 --TGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTM----FGHTNSVNHCRFSPDDELLASC 761 (1249)
T ss_dssp --TCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEE----CCCSSCEEEEEECSSTTEEEEE
T ss_pred --CCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhhee----cCCCCCEEEEEEecCCCEEEEE
Confidence 3456677889999999999998 5568999999999999999764322211 1111222334455554444332
Q ss_pred C-CCcceEEeccccee-eeEE-----------------EeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEee-cCC
Q 022074 193 C-DQSVATYKGHSVLR-TLIR-----------------CHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALK-YHT 252 (303)
Q Consensus 193 ~-~~~~~~~~~~~~~~-~~~~-----------------~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~-~h~ 252 (303)
. +..+..++-..... .... ......|+++++++++++ ++.+.+||..++..+..+. +|.
T Consensus 762 s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-~~~v~~~d~~~~~~~~~~~~~~~ 840 (1249)
T 3sfz_A 762 SADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-KNKVLLFDIHTSGLLAEIHTGHH 840 (1249)
T ss_dssp ESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE-TTEEEEEETTTCCEEEEEECSSS
T ss_pred ECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEc-CCcEEEEEecCCCceeEEcCCCC
Confidence 2 33444444322111 1111 111234788999888887 7899999999988877665 899
Q ss_pred CCeEEEEECCCCCeEEEEeCCCCEEEeecCCC
Q 022074 253 SPVRDCSWHPSQPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 253 ~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~~ 284 (303)
.+|.+++|+|+++++++++.||.+++|++...
T Consensus 841 ~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~ 872 (1249)
T 3sfz_A 841 STIQYCDFSPYDHLAVIALSQYCVELWNIDSR 872 (1249)
T ss_dssp SCCCEEEECSSTTEEEEECSSSCEEEEETTTT
T ss_pred CceEEEEEcCCCCEEEEEeCCCeEEEEEcCCC
Confidence 99999999999999999999999999998753
No 97
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.95 E-value=1.7e-25 Score=204.86 Aligned_cols=64 Identities=20% Similarity=0.293 Sum_probs=58.4
Q ss_pred CCeEEEEEeCCCeEEEEECCCCeEEEEe-----ecCCCCeEEEEECCCCCeEEEEeCCCC----EEEeecCCC
Q 022074 221 GQKYIYTGSHDSCVYVYDLVSGEQVAAL-----KYHTSPVRDCSWHPSQPMLVSSSWDGD----VVRWEFPGN 284 (303)
Q Consensus 221 ~~~~latg~~dg~i~iwd~~~~~~~~~~-----~~h~~~I~~v~~sp~~~~las~s~Dg~----i~~Wd~~~~ 284 (303)
+++++++|+.||.|++||+.+++.+..+ ..|..+|++++|+|++.+||+++.||+ +.+||+...
T Consensus 371 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 371 NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp CSSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred CCCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence 4689999999999999999999988877 478889999999999999999999998 999998753
No 98
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.95 E-value=1e-25 Score=213.14 Aligned_cols=224 Identities=15% Similarity=0.233 Sum_probs=178.8
Q ss_pred hccccccccccCcCc--ccccCCCcccc-eEEEEEcC--CCCEEEEeeCCCeEEEEECCCC--------ceEEEEecccC
Q 022074 16 ESLANVTEIHDGLDF--SAADDGGYSFG-IFSLKFST--DGRELVAGSSDDCIYVYDLEAN--------KLSLRILAHTS 82 (303)
Q Consensus 16 ~~~~~~~~~~~~~~~--~~~~~~~~~~~-v~~l~~s~--~g~~l~sgs~Dg~v~lwd~~~~--------~~~~~~~~h~~ 82 (303)
+..+.||+.-+|... ......||..+ |.+++|+| ++++|++|+.||+|+|||+.++ .....+..|..
T Consensus 38 ~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~ 117 (615)
T 1pgu_A 38 GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAG 117 (615)
T ss_dssp TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSS
T ss_pred CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccc
Confidence 456788888666211 12234799999 99999999 9999999999999999999755 45566778999
Q ss_pred CeEEEEEccCCCcEEEEecCC----CeEEEEcCccccCCCccceeecccccCeEEEEeCCCCC-EEEEEeCCCcEEEEEc
Q 022074 83 DVNTVCFGDESGHLIYSGSDD----NLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGR-YLISNGKDQAIKLWDI 157 (303)
Q Consensus 83 ~v~~l~~~~~~~~~l~s~s~d----g~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~D~~v~lWdl 157 (303)
.|.+++|++ ++++|++++.+ +.|++||. ......+.+|...|.++.|+++++ ++++++.|+.|++||+
T Consensus 118 ~v~~~~~s~-~~~~l~~~~~~~~~~~~v~~~d~------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~ 190 (615)
T 1pgu_A 118 PISDISWDF-EGRRLCVVGEGRDNFGVFISWDS------GNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQG 190 (615)
T ss_dssp CEEEEEECT-TSSEEEEEECCSSCSEEEEETTT------CCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEET
T ss_pred cEEEEEEeC-CCCEEEEeccCCCCccEEEEEEC------CCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeC
Confidence 999999975 57889999887 79999983 235667788999999999999998 8999999999999997
Q ss_pred ccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCC-CeEEEEEeCCCeEEE
Q 022074 158 RKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTG-QKYIYTGSHDSCVYV 236 (303)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-~~~latg~~dg~i~i 236 (303)
+.... +..+.+|..... ......|+|+ +++|++++.||.|++
T Consensus 191 ~~~~~----------------------------------~~~~~~~~~~~~---~v~~~~~~~~~~~~l~~~~~dg~i~v 233 (615)
T 1pgu_A 191 PPFKF----------------------------------SASDRTHHKQGS---FVRDVEFSPDSGEFVITVGSDRKISC 233 (615)
T ss_dssp TTBEE----------------------------------EEEECSSSCTTC---CEEEEEECSTTCCEEEEEETTCCEEE
T ss_pred CCcce----------------------------------eeeecccCCCCc---eEEEEEECCCCCCEEEEEeCCCeEEE
Confidence 64221 111222211000 0112347788 999999999999999
Q ss_pred EECCCCeEEEEe-e---cCCCCeEEEEECCCCCeEEEEeCCCCEEEeecCCC
Q 022074 237 YDLVSGEQVAAL-K---YHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 237 wd~~~~~~~~~~-~---~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~~ 284 (303)
||+.+++.+..+ . .|..+|.+++|+ ++++|++++.|+.+++||+...
T Consensus 234 wd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~ 284 (615)
T 1pgu_A 234 FDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTS 284 (615)
T ss_dssp EETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTT
T ss_pred EECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCC
Confidence 999999999888 6 899999999999 9999999999999999998743
No 99
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.95 E-value=1.3e-25 Score=200.41 Aligned_cols=223 Identities=11% Similarity=0.077 Sum_probs=154.5
Q ss_pred CCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCcccc
Q 022074 36 GGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLN 115 (303)
Q Consensus 36 ~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~ 115 (303)
.+|+.+|.+++|+|||++|++|+.|+ ++|||+.++...... +...+..+++.+....++++++.|++|++||.+
T Consensus 16 ~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~--- 89 (355)
T 3vu4_A 16 NHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQ--EMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDV--- 89 (355)
T ss_dssp ---CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEE--ECSCCCEEEECTTSSEEEEECSSTTEEEEEETT---
T ss_pred ccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeee--ecCCeEEEEEcCCCCEEEEEECCccEEEEEECC---
Confidence 78999999999999999999998776 889999887654332 223577788865544445678889999999975
Q ss_pred CCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccc-cCCcccccCccceeeeceeeeCCCCCccccC---
Q 022074 116 VKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKM-SSNASCNLGFRSYEWDYRWMDYPPQARDLKH--- 191 (303)
Q Consensus 116 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 191 (303)
.++....+. |...|.++.++++. ++.+ .|+.|++||++.. ........ ......+.+ ..+..
T Consensus 90 -~~~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~-------~~~~~~~s~--~~la~~sg 155 (355)
T 3vu4_A 90 -KKQDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR-------FGGVCEFSN--GLLVYSNE 155 (355)
T ss_dssp -TTEEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE-------EEEEEEEET--TEEEEEES
T ss_pred -CCcEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc-------CCceEEEEc--cEEEEeCC
Confidence 333444443 66789999998753 4443 4789999999865 22211111 000000000 00000
Q ss_pred CCCCc---------------------------ceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCe-EEEEECCCCe
Q 022074 192 PCDQS---------------------------VATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSC-VYVYDLVSGE 243 (303)
Q Consensus 192 ~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~-i~iwd~~~~~ 243 (303)
..+.. +..+.+|.... ....|+|++++|++|+.|++ |++||+.+++
T Consensus 156 ~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v------~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~ 229 (355)
T 3vu4_A 156 FNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPI------KMVRLNRKSDMVATCSQDGTIIRVFKTEDGV 229 (355)
T ss_dssp SCTTCEEEEECCC------------------CCEEECCCSSCE------EEEEECTTSSEEEEEETTCSEEEEEETTTCC
T ss_pred CcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCce------EEEEECCCCCEEEEEeCCCCEEEEEECCCCc
Confidence 01111 33344443221 23457899999999999998 9999999999
Q ss_pred EEEEee-c-CCCCeEEEEECCCCCeEEEEeCCCCEEEeecCCC
Q 022074 244 QVAALK-Y-HTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 244 ~~~~~~-~-h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~~ 284 (303)
.+..+. + |..+|++++|+|++++|++++.|+++++||+...
T Consensus 230 ~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 230 LVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp EEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred EEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 999998 5 9999999999999999999999999999998654
No 100
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.95 E-value=1.5e-26 Score=203.44 Aligned_cols=259 Identities=14% Similarity=0.164 Sum_probs=182.8
Q ss_pred chhhccccccccccCcCc-ccccCCCcccceEEEEEcCCCC-EEEEeeCCCeEEEEEC-CCCceEEEEec--ccCCeEEE
Q 022074 13 GTMESLANVTEIHDGLDF-SAADDGGYSFGIFSLKFSTDGR-ELVAGSSDDCIYVYDL-EANKLSLRILA--HTSDVNTV 87 (303)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~l~~s~~g~-~l~sgs~Dg~v~lwd~-~~~~~~~~~~~--h~~~v~~l 87 (303)
|+.|..+.||+.-++... ......+|..+|.+++|+|+++ ++++|+.||.|++||+ .++.. ..+.. |...|.++
T Consensus 29 ~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l 107 (342)
T 1yfq_A 29 TSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLGICRI 107 (342)
T ss_dssp EETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSCEEEE
T ss_pred EcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCceEEE
Confidence 456788889988666511 1223358999999999999999 9999999999999999 88765 56778 99999999
Q ss_pred EEccCCCcEEEEecCCCeEEEEcCccccCC-----CccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEccc-cc
Q 022074 88 CFGDESGHLIYSGSDDNLCKVWDRRCLNVK-----GKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRK-MS 161 (303)
Q Consensus 88 ~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~-----~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~-~~ 161 (303)
+|++ ++.|++++.|+.|++||++..... .++...+. |...+.++++++++ +++++.|+.|++||++. ..
T Consensus 108 ~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~ 182 (342)
T 1yfq_A 108 CKYG--DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCED 182 (342)
T ss_dssp EEET--TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTT
T ss_pred EeCC--CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCcccc
Confidence 9976 789999999999999998631000 22333343 88899999999876 99999999999999986 33
Q ss_pred CCcccccCccceeeeceeeeCCC-CCccccCCC-C-----------------CcceEEecccceee---eEEEeeeeeee
Q 022074 162 SNASCNLGFRSYEWDYRWMDYPP-QARDLKHPC-D-----------------QSVATYKGHSVLRT---LIRCHFSPVYS 219 (303)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~-----------------~~~~~~~~~~~~~~---~~~~~~~~~~s 219 (303)
....... ......+..+.+.+ ....+.... + .....+.++..... .........|+
T Consensus 183 ~~~~~~~--~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 260 (342)
T 1yfq_A 183 DNGTIEE--SGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFS 260 (342)
T ss_dssp CCCEEEE--CSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEEC
T ss_pred ccceeee--cCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEc
Confidence 2111000 00111122233333 322221111 1 12223333221000 00011234578
Q ss_pred CCCeEEEEEeCCCeEEEEECCCCeEEEEeecC-CCCeEEEEECCCCCeEEEEeCCCC-EEEeec
Q 022074 220 TGQKYIYTGSHDSCVYVYDLVSGEQVAALKYH-TSPVRDCSWHPSQPMLVSSSWDGD-VVRWEF 281 (303)
Q Consensus 220 ~~~~~latg~~dg~i~iwd~~~~~~~~~~~~h-~~~I~~v~~sp~~~~las~s~Dg~-i~~Wd~ 281 (303)
|++++|++|+.||.|++||+.+++.+..+..| ..+|++++ |++++|++++.||. .+.|..
T Consensus 261 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~~~ 322 (342)
T 1yfq_A 261 PRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDTFKTNAAI 322 (342)
T ss_dssp TTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTHHHHCSSS
T ss_pred CCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCCcccccccc
Confidence 89999999999999999999999999999998 99999999 99999999999998 776664
No 101
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.95 E-value=8.1e-26 Score=221.29 Aligned_cols=261 Identities=15% Similarity=0.200 Sum_probs=191.2
Q ss_pred hhhccccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCC
Q 022074 14 TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDES 93 (303)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~ 93 (303)
+.+..+.||+.-+|.... ...+|..+|.+++|+|++++|++|+.||+|++||+.+++....+.+|.+.|.+++|+| +
T Consensus 32 ~~~g~v~iwd~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~-~ 108 (814)
T 3mkq_A 32 LYSGRVEIWNYETQVEVR--SIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHP-T 108 (814)
T ss_dssp ETTSEEEEEETTTTEEEE--EEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECS-S
T ss_pred eCCCEEEEEECCCCceEE--EEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeC-C
Confidence 456778888876655332 2358999999999999999999999999999999999998888889999999999975 5
Q ss_pred CcEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCC-CCCEEEEEeCCCcEEEEEcccccCCcccccCccc
Q 022074 94 GHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRG-DGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRS 172 (303)
Q Consensus 94 ~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~ 172 (303)
++.|++++.||+|++||++. .......+.+|...|.++.|+| ++.+|++++.|+.|++||++.............
T Consensus 109 ~~~l~~~~~dg~i~vw~~~~---~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~- 184 (814)
T 3mkq_A 109 KPYVLSGSDDLTVKLWNWEN---NWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQE- 184 (814)
T ss_dssp SSEEEEEETTSEEEEEEGGG---TSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCT-
T ss_pred CCEEEEEcCCCEEEEEECCC---CceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCC-
Confidence 77999999999999999752 1234566778999999999999 888999999999999999976443322211110
Q ss_pred eeeeceeeeCCC--CCccccCC-CCCcceEEecccce-eeeEEE----eeeeeeeCCCeEEEEEeCCCeEEEEECCCCeE
Q 022074 173 YEWDYRWMDYPP--QARDLKHP-CDQSVATYKGHSVL-RTLIRC----HFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQ 244 (303)
Q Consensus 173 ~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~----~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~ 244 (303)
..+..+.+.+ ....+... .+..+..++..... ...... .....|+|+++++++++.||.|++||..+++.
T Consensus 185 --~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~ 262 (814)
T 3mkq_A 185 --RGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKV 262 (814)
T ss_dssp --TCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSE
T ss_pred --CCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 1112223332 33222221 22233333221110 011111 12345788999999999999999999999999
Q ss_pred EEEeecCCCCeEEEEECCCCCe-EEEEeCCCCEEEeecCC
Q 022074 245 VAALKYHTSPVRDCSWHPSQPM-LVSSSWDGDVVRWEFPG 283 (303)
Q Consensus 245 ~~~~~~h~~~I~~v~~sp~~~~-las~s~Dg~i~~Wd~~~ 283 (303)
+..+..|..++++++|+|+++. +++++.|+.+.+|++..
T Consensus 263 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (814)
T 3mkq_A 263 EKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGN 302 (814)
T ss_dssp EEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSC
T ss_pred EEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCC
Confidence 9999999999999999999873 34555577788898654
No 102
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.95 E-value=2.9e-25 Score=203.30 Aligned_cols=216 Identities=25% Similarity=0.410 Sum_probs=176.2
Q ss_pred CchhhccccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEcc
Q 022074 12 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGD 91 (303)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~ 91 (303)
+|+.|..+.||+.-+|.... ...||..+|.++.|+ ++.+++|+.||+|++||+.+++....+.+|...|.++.+.
T Consensus 134 sg~~dg~i~vwd~~~~~~~~--~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~- 208 (445)
T 2ovr_B 134 SGSDDNTLKVWSAVTGKCLR--TLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH- 208 (445)
T ss_dssp EEETTSCEEEEETTTCCEEE--ECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE-
T ss_pred EEECCCcEEEEECCCCcEEE--EEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec-
Confidence 46678889999987765332 346999999999998 6799999999999999999999888888999999999994
Q ss_pred CCCcEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCcc
Q 022074 92 ESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFR 171 (303)
Q Consensus 92 ~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~ 171 (303)
++.+++|+.||+|++||++ ..+....+.+|...|.++.+ +++++++++.|+.|++||++....
T Consensus 209 --~~~l~s~s~dg~i~~wd~~----~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~--------- 271 (445)
T 2ovr_B 209 --EKRVVSGSRDATLRVWDIE----TGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETC--------- 271 (445)
T ss_dssp --TTEEEEEETTSEEEEEESS----SCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEE---------
T ss_pred --CCEEEEEeCCCEEEEEECC----CCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcE---------
Confidence 4579999999999999986 34456677889999999988 678999999999999999874321
Q ss_pred ceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEeecC
Q 022074 172 SYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYH 251 (303)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~h 251 (303)
+..+.+|......+ .+ ++.++++|+.||.|++||+.+++.+..+.+|
T Consensus 272 -------------------------~~~~~~~~~~v~~~------~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 318 (445)
T 2ovr_B 272 -------------------------LHTLQGHTNRVYSL------QF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGH 318 (445)
T ss_dssp -------------------------EEEECCCSSCEEEE------EE--CSSEEEEEETTSCEEEEETTTCCEEEEECCC
T ss_pred -------------------------eEEecCCCCceEEE------EE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCC
Confidence 11222222111111 12 5788999999999999999999999999999
Q ss_pred CCCeEEEEECCCCCeEEEEeCCCCEEEeecCCC
Q 022074 252 TSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 252 ~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~~ 284 (303)
...+.++.+ ++++|++++.||.|++||+...
T Consensus 319 ~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~ 349 (445)
T 2ovr_B 319 QSLTSGMEL--KDNILVSGNADSTVKIWDIKTG 349 (445)
T ss_dssp CSCEEEEEE--ETTEEEEEETTSCEEEEETTTC
T ss_pred cccEEEEEE--eCCEEEEEeCCCeEEEEECCCC
Confidence 999998887 4679999999999999998643
No 103
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.1e-25 Score=208.66 Aligned_cols=217 Identities=9% Similarity=-0.061 Sum_probs=160.1
Q ss_pred cccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccC-----CeEEEEEccC
Q 022074 18 LANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTS-----DVNTVCFGDE 92 (303)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~-----~v~~l~~~~~ 92 (303)
..+.|++|+|..... -..+|+..|.+++|||+|+.||+++.||+|+|||.++ ....+. |+. .|.+++|+|
T Consensus 65 ~~~~~~~~~~~~~~~-~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSP- 139 (588)
T 2j04_A 65 FENKLDFELAQQNGL-LNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNP- 139 (588)
T ss_dssp CCCTTTTSCCCSSCS-STTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECS-
T ss_pred CcceEEEEeCCCceE-eecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcC-
Confidence 346677777653321 1236688899999999999999999999999999644 444455 665 499999976
Q ss_pred CCcEEEEecCCCeEEEEcCccccCCCc---cceee----cccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcc
Q 022074 93 SGHLIYSGSDDNLCKVWDRRCLNVKGK---PAGVL----MGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNAS 165 (303)
Q Consensus 93 ~~~~l~s~s~dg~v~lWd~~~~~~~~~---~~~~~----~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~ 165 (303)
++++|++|+.||+|++||+........ ....+ .+|.+.|.+++|+|+| +++++.|++|++||+......
T Consensus 140 DG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~-- 215 (588)
T 2j04_A 140 IESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQ-- 215 (588)
T ss_dssp SSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSC--
T ss_pred CCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccc--
Confidence 589999999999999999864321000 13444 6788899999999998 889999999999998542210
Q ss_pred cccCccceeeeceeeeCCCCCccccCCCCCcceEEe-cccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeE
Q 022074 166 CNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYK-GHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQ 244 (303)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~ 244 (303)
....++. +|.... ....|+ ++.||+++ +++|++||+.+++.
T Consensus 216 -----------------------------~~~~tL~~~h~~~V------~svaFs--g~~LASa~-~~tIkLWd~~~~~~ 257 (588)
T 2j04_A 216 -----------------------------PVSRMIQNASRRKI------TDLKIV--DYKVVLTC-PGYVHKIDLKNYSI 257 (588)
T ss_dssp -----------------------------CCEEEEECCCSSCC------CCEEEE--TTEEEEEC-SSEEEEEETTTTEE
T ss_pred -----------------------------cceeeecccccCcE------EEEEEE--CCEEEEEe-CCeEEEEECCCCeE
Confidence 0011121 221111 122355 47888887 69999999998876
Q ss_pred EEEeecCCCCeEEEEE--CCCCCeEEEEeCCCCEEEeecC
Q 022074 245 VAALKYHTSPVRDCSW--HPSQPMLVSSSWDGDVVRWEFP 282 (303)
Q Consensus 245 ~~~~~~h~~~I~~v~~--sp~~~~las~s~Dg~i~~Wd~~ 282 (303)
.....+|...|.+++| +|++..|+++++||+ ++|...
T Consensus 258 ~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 258 SSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp EEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred EEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 3333389999999999 999999999999999 999975
No 104
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.95 E-value=9.7e-26 Score=213.36 Aligned_cols=209 Identities=17% Similarity=0.161 Sum_probs=170.6
Q ss_pred ccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCC----ceEEEEecccCC-eEEEEEccC-CCcEEEEecCCCeE
Q 022074 33 ADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN----KLSLRILAHTSD-VNTVCFGDE-SGHLIYSGSDDNLC 106 (303)
Q Consensus 33 ~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~----~~~~~~~~h~~~-v~~l~~~~~-~~~~l~s~s~dg~v 106 (303)
+.+.+|...|.+++|+|+|+++++++ ++.|+|||+.++ +....+.+|... |.+++|+|. ++++|++++.||+|
T Consensus 12 ~~~~~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v 90 (615)
T 1pgu_A 12 PQPSTQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKV 90 (615)
T ss_dssp CCCCCCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEE
T ss_pred CCCCCccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEE
Confidence 34568999999999999999999998 889999999988 778888999999 999999751 57899999999999
Q ss_pred EEEcCccccC----CCccceeecccccCeEEEEeCCCCCEEEEEeCC----CcEEEEEcccccCCcccccCccceeeece
Q 022074 107 KVWDRRCLNV----KGKPAGVLMGHLEGITFIDSRGDGRYLISNGKD----QAIKLWDIRKMSSNASCNLGFRSYEWDYR 178 (303)
Q Consensus 107 ~lWd~~~~~~----~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D----~~v~lWdl~~~~~~~~~~~~~~~~~~~~~ 178 (303)
++||+..... .......+.+|...|.+++|++++++|++++.| +.|++||....
T Consensus 91 ~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~~------------------ 152 (615)
T 1pgu_A 91 IVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNS------------------ 152 (615)
T ss_dssp EEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCE------------------
T ss_pred EEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECCCc------------------
Confidence 9999742100 123455677899999999999999999999988 68999984210
Q ss_pred eeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCe-EEEEEeCCCeEEEEECCCCeEEEEeecCCC---C
Q 022074 179 WMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQK-YIYTGSHDSCVYVYDLVSGEQVAALKYHTS---P 254 (303)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~latg~~dg~i~iwd~~~~~~~~~~~~h~~---~ 254 (303)
+..+.+|.... ....|+|+++ ++++++.|+.|++||..+++.+..+..|.. +
T Consensus 153 ------------------~~~~~~~~~~v------~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~ 208 (615)
T 1pgu_A 153 ------------------LGEVSGHSQRI------NACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSF 208 (615)
T ss_dssp ------------------EEECCSCSSCE------EEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCC
T ss_pred ------------------ceeeecCCccE------EEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCce
Confidence 11112222111 1234677776 899999999999999999999999999999 9
Q ss_pred eEEEEECCC-CCeEEEEeCCCCEEEeecCCC
Q 022074 255 VRDCSWHPS-QPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 255 I~~v~~sp~-~~~las~s~Dg~i~~Wd~~~~ 284 (303)
|++++|+|+ +++|++++.|+.+++||+...
T Consensus 209 v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 239 (615)
T 1pgu_A 209 VRDVEFSPDSGEFVITVGSDRKISCFDGKSG 239 (615)
T ss_dssp EEEEEECSTTCCEEEEEETTCCEEEEETTTC
T ss_pred EEEEEECCCCCCEEEEEeCCCeEEEEECCCC
Confidence 999999999 999999999999999998643
No 105
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.95 E-value=6.6e-27 Score=211.53 Aligned_cols=228 Identities=18% Similarity=0.261 Sum_probs=174.6
Q ss_pred CchhhccccccccccCcCc-----ccccCCCcccceEEEEEcCCC-CEEEEeeCCCeEEEEECCCCceEEEE--ecccCC
Q 022074 12 SGTMESLANVTEIHDGLDF-----SAADDGGYSFGIFSLKFSTDG-RELVAGSSDDCIYVYDLEANKLSLRI--LAHTSD 83 (303)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~v~~l~~s~~g-~~l~sgs~Dg~v~lwd~~~~~~~~~~--~~h~~~ 83 (303)
+|+.|..+.||++-+|... ......||..+|.+++|+|++ +.+++|+.||+|++||+.+++....+ ..|...
T Consensus 99 s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 178 (402)
T 2aq5_A 99 SGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDT 178 (402)
T ss_dssp EEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSC
T ss_pred EEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCc
Confidence 4566788999998776421 122336899999999999998 69999999999999999999888778 789999
Q ss_pred eEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCccceee-cccccC-eEEEEeCCCCCEEEEE---eCCCcEEEEEcc
Q 022074 84 VNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVL-MGHLEG-ITFIDSRGDGRYLISN---GKDQAIKLWDIR 158 (303)
Q Consensus 84 v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~-~~h~~~-v~~~~~~~~~~~l~s~---~~D~~v~lWdl~ 158 (303)
|.+++|++ ++++|++++.|+.|++||++. ......+ .+|... +..+.+++++.+|+++ +.|+.|++||++
T Consensus 179 v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~ 253 (402)
T 2aq5_A 179 IYSVDWSR-DGALICTSCRDKRVRVIEPRK----GTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTK 253 (402)
T ss_dssp EEEEEECT-TSSCEEEEETTSEEEEEETTT----TEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETT
T ss_pred eEEEEECC-CCCEEEEEecCCcEEEEeCCC----CceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCc
Confidence 99999975 578999999999999999863 3344555 678776 8889999999999999 799999999997
Q ss_pred cccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEE-EEeCCCeEEEE
Q 022074 159 KMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIY-TGSHDSCVYVY 237 (303)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la-tg~~dg~i~iw 237 (303)
........ ........ ...+.|++++++|+ +|+.||.|++|
T Consensus 254 ~~~~~~~~-------------------------------~~~~~~~~-------v~~~~~s~~~~~l~~~g~~dg~i~i~ 295 (402)
T 2aq5_A 254 HLEEPLSL-------------------------------QELDTSSG-------VLLPFFDPDTNIVYLCGKGDSSIRYF 295 (402)
T ss_dssp BCSSCSEE-------------------------------EECCCCSS-------CEEEEEETTTTEEEEEETTCSCEEEE
T ss_pred cccCCceE-------------------------------EeccCCCc-------eeEEEEcCCCCEEEEEEcCCCeEEEE
Confidence 53321000 00000000 11234778888886 45589999999
Q ss_pred ECCCCeE-EEEeec--CCCCeEEEEECCCCCeEEEEeCCCCEEEeecCCC
Q 022074 238 DLVSGEQ-VAALKY--HTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 238 d~~~~~~-~~~~~~--h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~~ 284 (303)
|+.+++. +..+.. |..+|++++|+|++.++++ .|+.+++|++...
T Consensus 296 d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~ 343 (402)
T 2aq5_A 296 EITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHER 343 (402)
T ss_dssp EECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETT
T ss_pred EecCCCcceEeecccccCCcccceEEeccccccee--cceeEEEEEcCCC
Confidence 9998873 444443 5689999999999998876 4569999998653
No 106
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=6.3e-26 Score=201.03 Aligned_cols=224 Identities=8% Similarity=0.019 Sum_probs=160.8
Q ss_pred ccCchhhccccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECC---------CCceEEEE-ec
Q 022074 10 VGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLE---------ANKLSLRI-LA 79 (303)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~---------~~~~~~~~-~~ 79 (303)
+-+|+.|..+.||+.-+|....... ..+|.++.|+|+ +++++.|++|++|+.. +++..... .+
T Consensus 51 l~sg~~Dg~v~iwd~~~~~~~~~~~----~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~ 123 (343)
T 3lrv_A 51 CMCRCEDGALHFTQLKDSKTITTIT----TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVD 123 (343)
T ss_dssp EEEEEETTEEEEEEESSSSCEEEEE----EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECC
T ss_pred EEEECCCCcEEEEECCCCcEEEEEe----cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecC
Confidence 3467788899999987776432111 456778888887 9999999999999665 44433333 36
Q ss_pred ccCCeEEEEEccC-CCcEEEEecCCCeEEEEcCccccCCCccceeec-ccccCeEEEEeCCCCCEEEEEeCCCcEEEEEc
Q 022074 80 HTSDVNTVCFGDE-SGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLM-GHLEGITFIDSRGDGRYLISNGKDQAIKLWDI 157 (303)
Q Consensus 80 h~~~v~~l~~~~~-~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl 157 (303)
|.+.|.+++|+|. +++++++++.||+|++||++. ........ .|...+.+++++|++.+|++|+.|+.|++||+
T Consensus 124 ~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~----~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~ 199 (343)
T 3lrv_A 124 SANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYED----DSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNL 199 (343)
T ss_dssp CSSCEEEEECCC---CCEEEEEETTCCEEEEESSS----SCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEES
T ss_pred CCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCC----CcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEEC
Confidence 7788999999751 578999999999999999863 22333332 34557999999999999999999999999999
Q ss_pred ccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEec-ccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEE
Q 022074 158 RKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKG-HSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYV 236 (303)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~i 236 (303)
+...... ..+.+ |.... ....|+|++.+|++++ |+.|++
T Consensus 200 ~~~~~~~---------------------------------~~~~~~h~~~v------~~l~fs~~g~~l~s~~-~~~v~i 239 (343)
T 3lrv_A 200 SSPDQAS---------------------------------SRFPVDEEAKI------KEVKFADNGYWMVVEC-DQTVVC 239 (343)
T ss_dssp SCTTSCC---------------------------------EECCCCTTSCE------EEEEECTTSSEEEEEE-SSBEEE
T ss_pred CCCCCCc---------------------------------cEEeccCCCCE------EEEEEeCCCCEEEEEe-CCeEEE
Confidence 7543210 11111 22111 1234788999999999 559999
Q ss_pred EECCCCeEEEEeec---CCCCeE--EEEECCCCCeEEEEeC-CCCEEEeecCCC
Q 022074 237 YDLVSGEQVAALKY---HTSPVR--DCSWHPSQPMLVSSSW-DGDVVRWEFPGN 284 (303)
Q Consensus 237 wd~~~~~~~~~~~~---h~~~I~--~v~~sp~~~~las~s~-Dg~i~~Wd~~~~ 284 (303)
||+++++.+..+.. |..++. +++|+|++++|++++. |+.+++|++...
T Consensus 240 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 240 FDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKK 293 (343)
T ss_dssp EETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred EEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEccc
Confidence 99998876544432 445555 6999999999999998 999999998543
No 107
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=5e-25 Score=195.21 Aligned_cols=225 Identities=10% Similarity=0.014 Sum_probs=162.6
Q ss_pred Cchhhccccccccc---------cCcCcccccCCCcccceEEEEEcC--CCCEEEEeeCCCeEEEEECCCCceEEEEe-c
Q 022074 12 SGTMESLANVTEIH---------DGLDFSAADDGGYSFGIFSLKFST--DGRELVAGSSDDCIYVYDLEANKLSLRIL-A 79 (303)
Q Consensus 12 ~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~v~~l~~s~--~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~-~ 79 (303)
+|+.|..+.||..- ++.-. .....+|..+|.+++|+| +++++++|+.||+|++||+.+++...... .
T Consensus 90 s~s~D~~i~~w~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~ 168 (343)
T 3lrv_A 90 SRGPCNRLLLLYPGNQITILDSKTNKVL-REIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAK 168 (343)
T ss_dssp EECSTTEEEEEETTTEEEEEETTTCCEE-EEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCC
T ss_pred EecCCCeEEEEEccCceEEeecCCccee-EEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecC
Confidence 45667777777432 11101 122357778999999999 99999999999999999999988755443 4
Q ss_pred ccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCccc-eeecc-cccCeEEEEeCCCCCEEEEEeCCCcEEEEEc
Q 022074 80 HTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPA-GVLMG-HLEGITFIDSRGDGRYLISNGKDQAIKLWDI 157 (303)
Q Consensus 80 h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~-~~~~~-h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl 157 (303)
|...+.+++|+| ++.+|++|+.||+|++||++.. ... ..+.+ |...|.+++|+|++.+|++++ |+.|++||+
T Consensus 169 ~~~~i~~~~~~p-dg~~lasg~~dg~i~iwd~~~~----~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~ 242 (343)
T 3lrv_A 169 SDVEYSSGVLHK-DSLLLALYSPDGILDVYNLSSP----DQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDL 242 (343)
T ss_dssp SSCCCCEEEECT-TSCEEEEECTTSCEEEEESSCT----TSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEET
T ss_pred CCCceEEEEECC-CCCEEEEEcCCCEEEEEECCCC----CCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEc
Confidence 556899999975 5889999999999999998732 223 45666 999999999999999999999 559999999
Q ss_pred ccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeC-CCeEEE
Q 022074 158 RKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSH-DSCVYV 236 (303)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~-dg~i~i 236 (303)
+......... .+..+...... ....|+|++++|++++. |+.|++
T Consensus 243 ~~~~~~~~~~-------------------------------~~~~~~~~~~~----~~~~~~~~g~~l~~~s~~d~~i~v 287 (343)
T 3lrv_A 243 RKDVGTLAYP-------------------------------TYTIPEFKTGT----VTYDIDDSGKNMIAYSNESNSLTI 287 (343)
T ss_dssp TSSTTCBSSC-------------------------------CCBC-----CC----EEEEECTTSSEEEEEETTTTEEEE
T ss_pred CCCCcceeec-------------------------------ccccccccccc----eEEEECCCCCEEEEecCCCCcEEE
Confidence 8643221100 00000000000 12347889999999998 999999
Q ss_pred EECCCCeEEEEeecCCCCeEEEEECC---CCCeEEEEeCCCCEEEeecC
Q 022074 237 YDLVSGEQVAALKYHTSPVRDCSWHP---SQPMLVSSSWDGDVVRWEFP 282 (303)
Q Consensus 237 wd~~~~~~~~~~~~h~~~I~~v~~sp---~~~~las~s~Dg~i~~Wd~~ 282 (303)
|++.+....... .++..++|+| +.+.|++++.|+.+.++-..
T Consensus 288 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~ 332 (343)
T 3lrv_A 288 YKFDKKTKNWTK----DEESALCLQSDTADFTDMDVVCGDGGIAAILKT 332 (343)
T ss_dssp EEECTTTCSEEE----EEEEECCC----CCCCEEEEEEETTEEEEEEEC
T ss_pred EEEcccccceEe----cCceeEecCccccccceeEEEecCCceEEEEec
Confidence 999765443222 5788999999 88999999999999988643
No 108
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.94 E-value=7.8e-25 Score=198.03 Aligned_cols=201 Identities=19% Similarity=0.327 Sum_probs=158.9
Q ss_pred CCcccc--eEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEec-ccCCeEEEEEccCCCcEEEEecCCCeEEEEcCc
Q 022074 36 GGYSFG--IFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILA-HTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRR 112 (303)
Q Consensus 36 ~~~~~~--v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~-h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~ 112 (303)
.||... +.+++|++ +.+++++.|++|++||+.++.....+.. |...|.+++|++ ++++|++|+.||.|++||+.
T Consensus 88 ~~~~~~~~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~-~~~~l~~~~~dg~i~iwd~~ 164 (401)
T 4aez_A 88 PGIIDDYYLNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSH-DGSFLSVGLGNGLVDIYDVE 164 (401)
T ss_dssp TTCCCCTTCBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECT-TSSEEEEEETTSCEEEEETT
T ss_pred CCCcCCceEEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECC-CCCEEEEECCCCeEEEEECc
Confidence 355543 55566764 5688899999999999999987665554 788999999976 57899999999999999975
Q ss_pred cccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCC
Q 022074 113 CLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHP 192 (303)
Q Consensus 113 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (303)
.......+.+|...|.++++ +++++++++.|+.|++||++....
T Consensus 165 ----~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~------------------------------ 208 (401)
T 4aez_A 165 ----SQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANH------------------------------ 208 (401)
T ss_dssp ----TCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSC------------------------------
T ss_pred ----CCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcc------------------------------
Confidence 34456677899999999998 567999999999999999873211
Q ss_pred CCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEECCCCC-eEEEEe
Q 022074 193 CDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQP-MLVSSS 271 (303)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~-~las~s 271 (303)
.+..+.+|.... ....|++++++|++|+.|+.|++||+.+++.+..+..|..+|.+++|+|++. ++++++
T Consensus 209 ---~~~~~~~~~~~v------~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~ 279 (401)
T 4aez_A 209 ---QIGTLQGHSSEV------CGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGG 279 (401)
T ss_dssp ---EEEEEECCSSCE------EEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEEC
T ss_pred ---eeeEEcCCCCCe------eEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEec
Confidence 112222332211 1234678899999999999999999999999888999999999999999875 566655
Q ss_pred --CCCCEEEeecCCC
Q 022074 272 --WDGDVVRWEFPGN 284 (303)
Q Consensus 272 --~Dg~i~~Wd~~~~ 284 (303)
.|+.|++||+...
T Consensus 280 gs~d~~i~i~d~~~~ 294 (401)
T 4aez_A 280 GTMDKQIHFWNAATG 294 (401)
T ss_dssp CTTTCEEEEEETTTC
T ss_pred CCCCCEEEEEECCCC
Confidence 7999999998654
No 109
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.94 E-value=3.7e-25 Score=198.25 Aligned_cols=237 Identities=9% Similarity=0.080 Sum_probs=158.7
Q ss_pred cceEEEEEcCCCCEEEEeeCCC-------eEEEEECCCCce----------EEEEecccCCeEEEEEccCCCcEEEE---
Q 022074 40 FGIFSLKFSTDGRELVAGSSDD-------CIYVYDLEANKL----------SLRILAHTSDVNTVCFGDESGHLIYS--- 99 (303)
Q Consensus 40 ~~v~~l~~s~~g~~l~sgs~Dg-------~v~lwd~~~~~~----------~~~~~~h~~~v~~l~~~~~~~~~l~s--- 99 (303)
+||++++|+|||+.|++||.|. +|+||++..+.. ...+..|...|.++++. ++.+++
T Consensus 15 ~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~---~~~~~~g~~ 91 (365)
T 4h5i_A 15 YPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS---KGIILVGCN 91 (365)
T ss_dssp SCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE---TTEEEEECC
T ss_pred CCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC---CCEEEEEEC
Confidence 6899999999999999997543 599999876532 12345677888888874 234444
Q ss_pred --------ecCCCeEEEEcCccccCCCcccee-----ecccccCeEEEEeCCCCCEEEEE--eCCCcEEEEEcccccCCc
Q 022074 100 --------GSDDNLCKVWDRRCLNVKGKPAGV-----LMGHLEGITFIDSRGDGRYLISN--GKDQAIKLWDIRKMSSNA 164 (303)
Q Consensus 100 --------~s~dg~v~lWd~~~~~~~~~~~~~-----~~~h~~~v~~~~~~~~~~~l~s~--~~D~~v~lWdl~~~~~~~ 164 (303)
++.|+++|+|++............ ...+...+.+++|+|||++++++ +.|++|++||++......
T Consensus 92 ~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~ 171 (365)
T 4h5i_A 92 ENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKF 171 (365)
T ss_dssp CCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEE
T ss_pred CCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEE
Confidence 456888999986422111111111 12344568899999999997654 479999999997654332
Q ss_pred ccccCccceeeeceeeeCCCCCccccCCCCCcceEEeccc---ceeeeE----EEeeeeeeeCCCeEEEEEeCCC----e
Q 022074 165 SCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHS---VLRTLI----RCHFSPVYSTGQKYIYTGSHDS----C 233 (303)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~----~~~~~~~~s~~~~~latg~~dg----~ 233 (303)
.... ...+..+.+.|+.+.+....+..+..+.... ...... .......|+|+++++++++.|+ .
T Consensus 172 ~~~~-----~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~ 246 (365)
T 4h5i_A 172 EIET-----RGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIV 246 (365)
T ss_dssp EEEC-----SSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEE
T ss_pred EeCC-----CCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeE
Confidence 2211 1123345566666665544443333322111 000000 0112345788999999999887 6
Q ss_pred EEEEECCCCeE----EEEeecCCCCeEEEEECCCCCeEEEEeCCCCEEEeecCCC
Q 022074 234 VYVYDLVSGEQ----VAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 234 i~iwd~~~~~~----~~~~~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~~ 284 (303)
+++||...... ...+.+|..+|++++||||+++||+|+.|++|++||+...
T Consensus 247 i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~ 301 (365)
T 4h5i_A 247 LTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDL 301 (365)
T ss_dssp EEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTT
T ss_pred EeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCC
Confidence 89999876643 3456789999999999999999999999999999998753
No 110
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.5e-24 Score=199.17 Aligned_cols=206 Identities=15% Similarity=0.134 Sum_probs=156.4
Q ss_pred cccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCc---eEEEEec-----------------------------------
Q 022074 38 YSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANK---LSLRILA----------------------------------- 79 (303)
Q Consensus 38 ~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~---~~~~~~~----------------------------------- 79 (303)
+..++.+++|+++|++|+++ .++.|++||+.+++ ....+..
T Consensus 3 ~~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (450)
T 2vdu_B 3 VIHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKG 81 (450)
T ss_dssp EECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC---------------------------------
T ss_pred ccccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcC
Confidence 34578999999999966655 67899999999887 4433332
Q ss_pred -------------------ccCCeEEEEEccCCCcE-EEEecCCCeEEEEcCccccCCCccceeec--ccccCeEEEEeC
Q 022074 80 -------------------HTSDVNTVCFGDESGHL-IYSGSDDNLCKVWDRRCLNVKGKPAGVLM--GHLEGITFIDSR 137 (303)
Q Consensus 80 -------------------h~~~v~~l~~~~~~~~~-l~s~s~dg~v~lWd~~~~~~~~~~~~~~~--~h~~~v~~~~~~ 137 (303)
|.+.|.+++|+|+ ++. +++++.||+|++||+... .+.....+. .|...|.+++|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d-~~~l~~~~~~dg~v~iwd~~~~--~~~~~~~~~~~~~~~~v~~~~~s 158 (450)
T 2vdu_B 82 DSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSD-ESRLIACADSDKSLLVFDVDKT--SKNVLKLRKRFCFSKRPNAISIA 158 (450)
T ss_dssp ------------------CCCCCEEEEEECTT-SSEEEEEEGGGTEEEEEEECSS--SSSCEEEEEEEECSSCEEEEEEC
T ss_pred ccccccCccccCCCCCCCccCCceEEEEEcCC-CCEEEEEECCCCeEEEEECcCC--CCceeeeeecccCCCCceEEEEc
Confidence 3336999999765 666 489999999999997510 223344444 566889999999
Q ss_pred CCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeee
Q 022074 138 GDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPV 217 (303)
Q Consensus 138 ~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (303)
|++.+|++++.|+.+++|++........ ....+.+|.... ....
T Consensus 159 p~~~~l~~~~~~g~v~~~~~~~~~~~~~------------------------------~~~~~~~h~~~v------~~~~ 202 (450)
T 2vdu_B 159 EDDTTVIIADKFGDVYSIDINSIPEEKF------------------------------TQEPILGHVSML------TDVH 202 (450)
T ss_dssp TTSSEEEEEETTSEEEEEETTSCCCSSC------------------------------CCCCSEECSSCE------EEEE
T ss_pred CCCCEEEEEeCCCcEEEEecCCcccccc------------------------------cceeeecccCce------EEEE
Confidence 9999999999999999999864321100 011122222111 1234
Q ss_pred eeCC---CeEEEEEeCCCeEEEEECCCCeEEEE-eecCCCCeEEEEECCCCCeEEEEeCCCCEEEeecCCC
Q 022074 218 YSTG---QKYIYTGSHDSCVYVYDLVSGEQVAA-LKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 218 ~s~~---~~~latg~~dg~i~iwd~~~~~~~~~-~~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~~ 284 (303)
|+|+ +++|++|+.|+.|++||+.+++.+.. +.+|..+|++++|+ ++++|++++.|++|++||+...
T Consensus 203 ~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~ 272 (450)
T 2vdu_B 203 LIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTG 272 (450)
T ss_dssp EEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTC
T ss_pred EcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCC
Confidence 6778 89999999999999999999887766 56899999999999 9999999999999999998754
No 111
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.93 E-value=8.3e-26 Score=204.31 Aligned_cols=228 Identities=11% Similarity=0.020 Sum_probs=133.7
Q ss_pred CcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEE-----EecccCCeEEEEEcc-------CCCcEEEEecCCC
Q 022074 37 GYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLR-----ILAHTSDVNTVCFGD-------ESGHLIYSGSDDN 104 (303)
Q Consensus 37 ~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~-----~~~h~~~v~~l~~~~-------~~~~~l~s~s~dg 104 (303)
+|...+....++++++.+++|+.|++|+|||+.++..... +.+|.+.|++++|+| .++++|+||+.|+
T Consensus 87 ~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~ 166 (393)
T 4gq1_A 87 LHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDC 166 (393)
T ss_dssp ----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTS
T ss_pred ccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCC
Confidence 4444444455556777899999999999999998864322 457999999999975 2478999999999
Q ss_pred eEEEEcCccccCCCccceeecccccCeEEEEeCCCC-CEEEEEeCCCcEEEEEcccccCCcccccCc-cceeeeceeeeC
Q 022074 105 LCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDG-RYLISNGKDQAIKLWDIRKMSSNASCNLGF-RSYEWDYRWMDY 182 (303)
Q Consensus 105 ~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~-~~~~~~~~~~~~ 182 (303)
+|+|||++ ...+...+.+|...|.+++|+|++ .+|++++.|++|++||++............ ....+... ...
T Consensus 167 tv~~Wd~~----~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s-~~~ 241 (393)
T 4gq1_A 167 TLIIWRLT----DEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLT-LNT 241 (393)
T ss_dssp EEEEEEEE----TTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEE-EES
T ss_pred eEEEEECC----CCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEe-ccc
Confidence 99999975 233455667888999999999987 479999999999999998643321111000 00000000 000
Q ss_pred CCCCccccCCCCCcceEEecccceeeeEEEeeeeee-eCCCeEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEC
Q 022074 183 PPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVY-STGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWH 261 (303)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~s 261 (303)
. .........++..... ...+ +++++.+++++.|+++++||+.+++....+..|...+..+.++
T Consensus 242 ----~-----~~~~~~~~~~~~~~v~------~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~ 306 (393)
T 4gq1_A 242 ----L-----PLVNTCHSSGIASSLA------NVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLL 306 (393)
T ss_dssp ----G-----GGC------CCSSSCS------EEEEETTTTCEEEEECTTSEEEEEEC-------------------CCS
T ss_pred ----c-----cceeeeecccccccce------eeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEc
Confidence 0 0000011112211111 1112 3789999999999999999999887766666666655555544
Q ss_pred CC--------------------CCeEEEEeCCCCEEEeecCCC
Q 022074 262 PS--------------------QPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 262 p~--------------------~~~las~s~Dg~i~~Wd~~~~ 284 (303)
|+ +.++++|+.||+|++||....
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~ 349 (393)
T 4gq1_A 307 PNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEK 349 (393)
T ss_dssp CSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCT
T ss_pred cccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCC
Confidence 42 336788999999999998654
No 112
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.93 E-value=2.7e-24 Score=188.74 Aligned_cols=218 Identities=17% Similarity=0.274 Sum_probs=143.8
Q ss_pred EEEEECCCCc--eEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccC-CCccceeecccccCeEEEEeCCC
Q 022074 63 IYVYDLEANK--LSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNV-KGKPAGVLMGHLEGITFIDSRGD 139 (303)
Q Consensus 63 v~lwd~~~~~--~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~-~~~~~~~~~~h~~~v~~~~~~~~ 139 (303)
++++...+.+ +..++.+|.+.|++++|+|+.+++|+||+.|++|++||+..... ...+...+.+|...|.++.|+++
T Consensus 18 ~~~~~~~~~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~d 97 (340)
T 4aow_A 18 LYFQSMMTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSD 97 (340)
T ss_dssp --------CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTT
T ss_pred EEEEEccCCceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCC
Confidence 3334443433 34568899999999999887788999999999999999863321 12345667899999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccC-CCCCcceEEecccceeeeE------EE
Q 022074 140 GRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKH-PCDQSVATYKGHSVLRTLI------RC 212 (303)
Q Consensus 140 ~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~------~~ 212 (303)
+++|++++.|+.|++|+............... ......+.+....+.. ..+..+..++......... ..
T Consensus 98 g~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~ 173 (340)
T 4aow_A 98 GQFALSGSWDGTLRLWDLTTGTTTRRFVGHTK----DVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEW 173 (340)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEECCSS----CEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSC
T ss_pred CCEEEEEcccccceEEeecccceeeeecCCCC----ceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCc
Confidence 99999999999999999875332111110000 0001111222221111 1112222221111000000 00
Q ss_pred eeeeeee--CCCeEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEECCCCCeEEEEeCCCCEEEeecCCC
Q 022074 213 HFSPVYS--TGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 213 ~~~~~~s--~~~~~latg~~dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~~ 284 (303)
.....++ +...++++++.|+.|++||+.+++.+..+.+|..+|++++|+|++++|++++.|+.|++||+...
T Consensus 174 v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~ 247 (340)
T 4aow_A 174 VSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEG 247 (340)
T ss_dssp EEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTT
T ss_pred ccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccC
Confidence 0111233 33567899999999999999999999999999999999999999999999999999999998654
No 113
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.93 E-value=4.9e-25 Score=218.85 Aligned_cols=256 Identities=11% Similarity=0.116 Sum_probs=169.9
Q ss_pred CchhhccccccccccCcCcccc----c-----CCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCc----------
Q 022074 12 SGTMESLANVTEIHDGLDFSAA----D-----DGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANK---------- 72 (303)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~----~-----~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~---------- 72 (303)
+|+.|..+.+|++-+|.-.... + ..||+..|.+++|+|||++||+|+.||+|+|||+.+++
T Consensus 452 Sgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~ 531 (902)
T 2oaj_A 452 TGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPES 531 (902)
T ss_dssp EEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------
T ss_pred EecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCC
Confidence 5678899999998777311000 0 12899999999999999999999999999999997662
Q ss_pred -----------------------------------eEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCC
Q 022074 73 -----------------------------------LSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVK 117 (303)
Q Consensus 73 -----------------------------------~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~ 117 (303)
....+.+|.+.|++++|+| ++ +|++|+.|++|+|||++.....
T Consensus 532 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSp-dG-~lAsgs~D~tv~lwd~~~~~~~ 609 (902)
T 2oaj_A 532 GDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSN-IG-FVGIAYAAGSLMLIDRRGPAII 609 (902)
T ss_dssp ------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECB-TS-EEEEEETTSEEEEEETTTTEEE
T ss_pred cccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecC-Cc-EEEEEeCCCcEEEEECCCCeEE
Confidence 2345677999999999975 57 9999999999999997532110
Q ss_pred C-ccceeec-ccccCeEEEEeC-----CCC---CEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCc
Q 022074 118 G-KPAGVLM-GHLEGITFIDSR-----GDG---RYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQAR 187 (303)
Q Consensus 118 ~-~~~~~~~-~h~~~v~~~~~~-----~~~---~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (303)
. .....+. +|.+.|++++|+ +|| .+|++|+.|++|++||+.... ...+...+... ........
T Consensus 610 ~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~-~g~~~~~~~~~------~~~~~~~~ 682 (902)
T 2oaj_A 610 YMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPAS-GGKFDVQLMDI------TNVTSKGP 682 (902)
T ss_dssp EEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECG-GGCEEEEEEEE------EECCSSCC
T ss_pred EEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCC-CCcEEEEecCc------eecCCCCc
Confidence 0 0112343 899999999999 885 899999999999999983211 11110000000 00000000
Q ss_pred cccCCCCCcceEEecccceeeeE--E--EeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEE---E-
Q 022074 188 DLKHPCDQSVATYKGHSVLRTLI--R--CHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDC---S- 259 (303)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~h~~~I~~v---~- 259 (303)
. ..+..++......... . ....+...+++.+|+++ +..|+||++.+++.+...-.|...+.++ .
T Consensus 683 v------~~i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~~~--~~~ir~~~~~~~k~~~k~~~~~~~~~~v~~~~~ 754 (902)
T 2oaj_A 683 I------HKIDAFSKETKSSCLATIPKMQNLSKGLCIPGIVLITG--FDDIRLITLGKSKSTHKGFKYPLAATGLSYIST 754 (902)
T ss_dssp C------CEEEEEETTTCCBCBCBHHHHHGGGGTCCCCEEEEEEC--SSEEEEECTTCCCEEEEECSSCEEEEEEEEEEE
T ss_pred e------EEEEeEecCCCCcccCCHHHHhccCCCCCCCeEEEEEe--ccceEEEeCccccceeeEcccceeeeEEEEEEe
Confidence 0 0011111000000000 0 00011122456655555 7789999999998876665666667776 6
Q ss_pred -----ECCCCCeEEEEeCCCCEEEeecCCC
Q 022074 260 -----WHPSQPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 260 -----~sp~~~~las~s~Dg~i~~Wd~~~~ 284 (303)
|++++..|++.+.||+|++|+++.-
T Consensus 755 ~~~~~~~~~~~~l~~~~~~g~i~~~s~p~l 784 (902)
T 2oaj_A 755 VEKNNDRKNLTVIITLEINGHLRVFTIPDF 784 (902)
T ss_dssp ECSSSCEEEEEEEEEEETTSEEEEEETTTC
T ss_pred ccccccccCceEEEEEeCCCcEEEEECcch
Confidence 7899999999999999999999865
No 114
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.92 E-value=1.3e-24 Score=190.69 Aligned_cols=228 Identities=16% Similarity=0.196 Sum_probs=154.5
Q ss_pred cCchhhccccccccccCcCcccccCCCcccceEEEEEcC--CCCEEEEeeCCCeEEEEECCCCc--eEEEEecccCCeEE
Q 022074 11 GSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST--DGRELVAGSSDDCIYVYDLEANK--LSLRILAHTSDVNT 86 (303)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~--~g~~l~sgs~Dg~v~lwd~~~~~--~~~~~~~h~~~v~~ 86 (303)
-+|+.|..+.||+.-+|.........||+.+|.+++|++ +++.|++|+.|++|+|||+.++. ....+.+|...|.+
T Consensus 29 asgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~ 108 (316)
T 3bg1_A 29 ATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNS 108 (316)
T ss_dssp EEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCE
T ss_pred EEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEE
Confidence 356788899999986664321234479999999999986 48999999999999999998874 44556789999999
Q ss_pred EEEccCC-CcEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCCC-----------------CCEEEEEeC
Q 022074 87 VCFGDES-GHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGD-----------------GRYLISNGK 148 (303)
Q Consensus 87 l~~~~~~-~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-----------------~~~l~s~~~ 148 (303)
++|+|+. +.+|++|+.|++|++||++... .......+.+|...|.+++|+|+ +.+|++++.
T Consensus 109 v~~~p~~~g~~lasgs~D~~i~lwd~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~ 187 (316)
T 3bg1_A 109 VCWAPHDYGLILACGSSDGAISLLTYTGEG-QWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGC 187 (316)
T ss_dssp EEECCTTTCSCEEEECSSSCEEEEEECSSS-CEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBT
T ss_pred EEECCCCCCcEEEEEcCCCCEEEEecCCCC-CcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecC
Confidence 9998753 6799999999999999976321 11123455688889999999886 468999999
Q ss_pred CCcEEEEEcccccCCcccccCccceeeeceeeeCCCCC----ccccC-CCCCcceEEecccc-----eeeeEE----Eee
Q 022074 149 DQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQA----RDLKH-PCDQSVATYKGHSV-----LRTLIR----CHF 214 (303)
Q Consensus 149 D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~-----~~~~~~----~~~ 214 (303)
|++|++||++.... ......+......+..+.+.|.. ..+.. ..+..+..++.... ....+. ..+
T Consensus 188 D~~v~lWd~~~~~~-~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~ 266 (316)
T 3bg1_A 188 DNLIKLWKEEEDGQ-WKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVW 266 (316)
T ss_dssp TSBCCEEEECTTSC-EEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEE
T ss_pred CCeEEEEEeCCCCc-cceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEE
Confidence 99999999864210 00000111111223334444432 22222 22333444432210 001111 123
Q ss_pred eeeeeCCCeEEEEEeCCCeEEEEECC
Q 022074 215 SPVYSTGQKYIYTGSHDSCVYVYDLV 240 (303)
Q Consensus 215 ~~~~s~~~~~latg~~dg~i~iwd~~ 240 (303)
...|+|++++||+|+.|+.|++|+..
T Consensus 267 ~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 267 HVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp EEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred EEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 45688999999999999999999975
No 115
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.9e-24 Score=200.28 Aligned_cols=190 Identities=11% Similarity=0.012 Sum_probs=142.2
Q ss_pred CcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccC
Q 022074 37 GYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNV 116 (303)
Q Consensus 37 ~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~ 116 (303)
-.+.+|.+++|+|||+++|+++.|++|+ |.+.++. +.+|...|.+++|+|+ + .++.+.+|+.+
T Consensus 13 ~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~---l~gh~~~v~~V~FsPd-g-------~~~~~~~~~~~---- 75 (588)
T 2j04_A 13 EFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKD---INCNSKNLFHVKEFPL-E-------FENKLDFELAQ---- 75 (588)
T ss_dssp CCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSC---CSSBGGGTEEEEEECC-C-------CCCTTTTSCCC----
T ss_pred HhhccEEEEEECCCCCEEEEEcCCceee--cccccce---ecCCCccEEEEEECCC-C-------CcceEEEEeCC----
Confidence 3456799999999999999999999999 7666643 4689999999999874 4 45555555532
Q ss_pred CCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCc
Q 022074 117 KGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQS 196 (303)
Q Consensus 117 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (303)
+..... ..|.+.|.+++|+|+|.+|++++.||.|++||....
T Consensus 76 -~~~~~~-~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~~------------------------------------ 117 (588)
T 2j04_A 76 -QNGLLN-SQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNKM------------------------------------ 117 (588)
T ss_dssp -SSCSST-TSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTEE------------------------------------
T ss_pred -CceEee-cCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCce------------------------------------
Confidence 111111 156788999999999999999999999999995320
Q ss_pred ceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCe-------EEEEe----ecCCCCeEEEEECCCCC
Q 022074 197 VATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGE-------QVAAL----KYHTSPVRDCSWHPSQP 265 (303)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~-------~~~~~----~~h~~~I~~v~~sp~~~ 265 (303)
+..+. |...... +...+..|||+|++||+|+.||+|++||+.+++ .+.++ .+|..+|.+++||||+
T Consensus 118 l~~l~-~~~~~~~-~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg- 194 (588)
T 2j04_A 118 LTNLD-SKGNLSS-RTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV- 194 (588)
T ss_dssp EEECC-CSSCSTT-TCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-
T ss_pred eeecc-CCCcccc-ccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-
Confidence 00001 0000000 000134588999999999999999999998875 35666 5778899999999999
Q ss_pred eEEEEeCCCCEEEeecCCCC
Q 022074 266 MLVSSSWDGDVVRWEFPGNG 285 (303)
Q Consensus 266 ~las~s~Dg~i~~Wd~~~~~ 285 (303)
+++++.|+++++|++.+..
T Consensus 195 -Laass~D~tVrlWd~~~~~ 213 (588)
T 2j04_A 195 -LVAALSNNSVFSMTVSASS 213 (588)
T ss_dssp -EEEEETTCCEEEECCCSSS
T ss_pred -EEEEeCCCeEEEEECCCCc
Confidence 8899999999999987654
No 116
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.92 E-value=8.2e-23 Score=185.95 Aligned_cols=197 Identities=18% Similarity=0.339 Sum_probs=152.7
Q ss_pred cceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEE--ecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCC
Q 022074 40 FGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRI--LAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVK 117 (303)
Q Consensus 40 ~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~--~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~ 117 (303)
+.+..|+||++ +.|++|. |++|+|||+.+++....+ .+|...|++++|++ ++++|++|+.||+|++||++ .
T Consensus 106 ~y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fsp-dg~~lasgs~Dg~v~iWd~~----~ 178 (420)
T 4gga_A 106 YYLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIK-EGNYLAVGTSSAEVQLWDVQ----Q 178 (420)
T ss_dssp TTCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECT-TSSEEEEEETTSCEEEEETT----T
T ss_pred ccceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECC-CCCEEEEEECCCeEEEEEcC----C
Confidence 45778999975 5677664 999999999999866544 46778899999975 58899999999999999986 3
Q ss_pred CccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcc
Q 022074 118 GKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSV 197 (303)
Q Consensus 118 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (303)
++....+.+|...+.++++ ++.+|++++.|+.+++||.+.... .+
T Consensus 179 ~~~~~~~~~h~~~v~~~s~--~~~~l~sgs~d~~i~~~d~~~~~~---------------------------------~~ 223 (420)
T 4gga_A 179 QKRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEH---------------------------------HV 223 (420)
T ss_dssp TEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSC---------------------------------EE
T ss_pred CcEEEEEeCCCCceEEEee--CCCEEEEEeCCCceeEeeecccce---------------------------------ee
Confidence 4566778899999998876 467999999999999999764211 12
Q ss_pred eEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCe----EEEEeecCCCCeEEEEECCCCC-eEEE--E
Q 022074 198 ATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGE----QVAALKYHTSPVRDCSWHPSQP-MLVS--S 270 (303)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~----~~~~~~~h~~~I~~v~~sp~~~-~las--~ 270 (303)
..+.+|..... ...++++++++++++.|+.+++||..+++ .+.....|...|.+++|+|++. ++++ |
T Consensus 224 ~~~~~h~~~~~------~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~g 297 (420)
T 4gga_A 224 ATLSGHSQEVC------GLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGG 297 (420)
T ss_dssp EEEECCSSCEE------EEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEEC
T ss_pred EEeccccccee------eeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEee
Confidence 23333332111 12356789999999999999999998765 3456678999999999999875 5554 4
Q ss_pred eCCCCEEEeecCCC
Q 022074 271 SWDGDVVRWEFPGN 284 (303)
Q Consensus 271 s~Dg~i~~Wd~~~~ 284 (303)
+.|++|++||+...
T Consensus 298 s~D~~I~iwd~~t~ 311 (420)
T 4gga_A 298 TSDRHIRIWNVCSG 311 (420)
T ss_dssp TTTCEEEEEETTTT
T ss_pred cCCCEEEEEeCCcc
Confidence 57999999998654
No 117
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.92 E-value=3.1e-22 Score=181.94 Aligned_cols=256 Identities=13% Similarity=0.064 Sum_probs=179.4
Q ss_pred hccccccccccCcCcccc---cCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccC
Q 022074 16 ESLANVTEIHDGLDFSAA---DDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDE 92 (303)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~ 92 (303)
+..+.+|+.-+|...... ...+|...|.+++|+++++.+++++.|+.|++||+++++....+..|...+.+++|+++
T Consensus 143 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (433)
T 3bws_A 143 DEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPI 222 (433)
T ss_dssp SSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETT
T ss_pred CCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCC
Confidence 455777777555432111 22589999999999999999999999999999999999888888889999999999865
Q ss_pred CCcEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEe--------CCCcEEEEEcccccCCc
Q 022074 93 SGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNG--------KDQAIKLWDIRKMSSNA 164 (303)
Q Consensus 93 ~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~--------~D~~v~lWdl~~~~~~~ 164 (303)
...++++++.|+.|++||++. ++....+.. ...+..++++++++++++++ .|+.|++||++..+...
T Consensus 223 ~~~l~~~~~~~~~i~~~d~~~----~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~ 297 (433)
T 3bws_A 223 RDLVYCSNWISEDISVIDRKT----KLEIRKTDK-IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLID 297 (433)
T ss_dssp TTEEEEEETTTTEEEEEETTT----TEEEEECCC-CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEE
T ss_pred CCEEEEEecCCCcEEEEECCC----CcEEEEecC-CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEe
Confidence 444446777899999999862 233333433 34588999999999999888 58899999987543211
Q ss_pred ccccCccceeeeceeeeCCCCCccccC--CCCCcceEEecccce-eeeEE---EeeeeeeeCCCeEEEEEeC--------
Q 022074 165 SCNLGFRSYEWDYRWMDYPPQARDLKH--PCDQSVATYKGHSVL-RTLIR---CHFSPVYSTGQKYIYTGSH-------- 230 (303)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~---~~~~~~~s~~~~~latg~~-------- 230 (303)
.. ........+.+.+..+.+.. ..+..+..++-.... ...+. ......++|+++++++++.
T Consensus 298 ~~-----~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 372 (433)
T 3bws_A 298 TI-----GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEG 372 (433)
T ss_dssp EE-----EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTC
T ss_pred ec-----cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccc
Confidence 11 00111223344454433221 223333334322110 01111 1123457899998888876
Q ss_pred -------CCeEEEEECCCCeEEEEeecCCCCeEEEEECCCCCeEEEEeC-CCCEEEeecC
Q 022074 231 -------DSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSW-DGDVVRWEFP 282 (303)
Q Consensus 231 -------dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~~las~s~-Dg~i~~Wd~~ 282 (303)
||.|++||..+++.+..+.. ...+.+++|+|++++|++++. |+.+++|++.
T Consensus 373 ~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 373 YLKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp TTSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred cccccccceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 57999999999998888875 457999999999999988875 9999999975
No 118
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.91 E-value=5.2e-22 Score=178.03 Aligned_cols=258 Identities=12% Similarity=0.097 Sum_probs=176.2
Q ss_pred CchhhccccccccccCcCcccccCCCcccceEEEEEcCCCCEE-EEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEc
Q 022074 12 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGREL-VAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFG 90 (303)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l-~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~ 90 (303)
+++.+..+.||+.-+|.... ...+|. .+.+++|+|+|+++ ++++.|++|++||+.+++....+..+. .+.+++|+
T Consensus 7 s~~~d~~v~v~d~~~~~~~~--~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~s 82 (391)
T 1l0q_A 7 ANSESDNISVIDVTSNKVTA--TIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVS 82 (391)
T ss_dssp EETTTTEEEEEETTTTEEEE--EEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEEC
T ss_pred EcCCCCEEEEEECCCCeEEE--EeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEEC
Confidence 34566788888886664332 113443 48999999999987 667799999999999998776665554 89999998
Q ss_pred cCCCcEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEE-EEEeCCCcEEEEEcccccCCcccccC
Q 022074 91 DESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYL-ISNGKDQAIKLWDIRKMSSNASCNLG 169 (303)
Q Consensus 91 ~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~D~~v~lWdl~~~~~~~~~~~~ 169 (303)
++...++++++.++.|++||+.. ++....+. +...+..++++++++++ ++++.|+.|++||++..........+
T Consensus 83 pdg~~l~~~~~~~~~v~v~d~~~----~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~ 157 (391)
T 1l0q_A 83 PDGKQVYVTNMASSTLSVIDTTS----NTVAGTVK-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG 157 (391)
T ss_dssp TTSSEEEEEETTTTEEEEEETTT----TEEEEEEE-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC
T ss_pred CCCCEEEEEECCCCEEEEEECCC----CeEEEEEe-CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC
Confidence 65443456777889999999762 23333343 34568899999999977 78888999999998754322221111
Q ss_pred ccceeeeceeeeCCCCCcccc-C-CCCCcceEEeccccee-eeE---EEeeeeeeeCCCeEEEEEe---CCCeEEEEECC
Q 022074 170 FRSYEWDYRWMDYPPQARDLK-H-PCDQSVATYKGHSVLR-TLI---RCHFSPVYSTGQKYIYTGS---HDSCVYVYDLV 240 (303)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~-~~~---~~~~~~~~s~~~~~latg~---~dg~i~iwd~~ 240 (303)
. ....+.+.++...+. . ..+..+..++...... ... .......++++++++++++ .++.|++||+.
T Consensus 158 ~-----~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~ 232 (391)
T 1l0q_A 158 R-----SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTG 232 (391)
T ss_dssp S-----SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETT
T ss_pred C-----CcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECC
Confidence 1 112233444444331 1 1222333333221110 011 0112345788999888887 69999999999
Q ss_pred CCeEEEEeecCCCCeEEEEECCCCCeE-EEEeCCCCEEEeecCCC
Q 022074 241 SGEQVAALKYHTSPVRDCSWHPSQPML-VSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 241 ~~~~~~~~~~h~~~I~~v~~sp~~~~l-as~s~Dg~i~~Wd~~~~ 284 (303)
+++.+..+..|. .+.+++|+|++++| ++++.|+.+++||+...
T Consensus 233 ~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~ 276 (391)
T 1l0q_A 233 TNKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATN 276 (391)
T ss_dssp TTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred CCeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCC
Confidence 999888888765 57999999999876 77789999999998743
No 119
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.91 E-value=4.4e-23 Score=180.34 Aligned_cols=227 Identities=12% Similarity=0.131 Sum_probs=151.1
Q ss_pred CchhhccccccccccCcCcc--cccCCCcccceEEEEEcC--CCCEEEEeeCCCeEEEEECCCC---------ceEEEEe
Q 022074 12 SGTMESLANVTEIHDGLDFS--AADDGGYSFGIFSLKFST--DGRELVAGSSDDCIYVYDLEAN---------KLSLRIL 78 (303)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~l~~s~--~g~~l~sgs~Dg~v~lwd~~~~---------~~~~~~~ 78 (303)
+|+.|..+.||+.-++.... .....+|..+|.+++|+| ++++|++|+.||+|++||+.++ .....+.
T Consensus 28 ~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~ 107 (351)
T 3f3f_A 28 TCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLN 107 (351)
T ss_dssp EEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEEC
T ss_pred EeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeec
Confidence 45678889999986654321 222368999999999999 6999999999999999999887 4456677
Q ss_pred cccCCeEEEEEccCC-CcEEEEecCCCeEEEEcCccccCCC---------------------------------------
Q 022074 79 AHTSDVNTVCFGDES-GHLIYSGSDDNLCKVWDRRCLNVKG--------------------------------------- 118 (303)
Q Consensus 79 ~h~~~v~~l~~~~~~-~~~l~s~s~dg~v~lWd~~~~~~~~--------------------------------------- 118 (303)
.|...|.+++|+++. +++|++++.||.|++||++......
T Consensus 108 ~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~ 187 (351)
T 3f3f_A 108 DSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAV 187 (351)
T ss_dssp CCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEE
T ss_pred ccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEE
Confidence 899999999997542 7899999999999999975322100
Q ss_pred -----------------ccceeecccccCeEEEEeCCCC----CEEEEEeCCCcEEEEEcccccCCcccccCccceeeec
Q 022074 119 -----------------KPAGVLMGHLEGITFIDSRGDG----RYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDY 177 (303)
Q Consensus 119 -----------------~~~~~~~~h~~~v~~~~~~~~~----~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~ 177 (303)
.....+.+|...|.+++++|++ ++|++++.|+.|++||++................
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~--- 264 (351)
T 3f3f_A 188 SALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSN--- 264 (351)
T ss_dssp EETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC----------------
T ss_pred ecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCccccee---
Confidence 0133455788999999999998 8999999999999999986422111100000000
Q ss_pred eeeeCCCCCcccc----------------CCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCC
Q 022074 178 RWMDYPPQARDLK----------------HPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVS 241 (303)
Q Consensus 178 ~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~ 241 (303)
............ ......+..+.+|.... ....|+|++++|++|+.||.|++||+.+
T Consensus 265 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v------~~~~~s~~~~~l~s~~~dg~v~iw~~~~ 337 (351)
T 3f3f_A 265 -MFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEV------WSVSWNLTGTILSSAGDDGKVRLWKATY 337 (351)
T ss_dssp ---------------------------CCSEEEEEEEEECTTSSCE------EEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred -ccCCCcccccccccccccccceeeeecccccccEEEEEecccccE------EEEEEcCCCCEEEEecCCCcEEEEecCc
Confidence 000000000000 00001222333333211 2345788999999999999999999998
Q ss_pred CeEEEEe
Q 022074 242 GEQVAAL 248 (303)
Q Consensus 242 ~~~~~~~ 248 (303)
++.+..+
T Consensus 338 ~~~~~~~ 344 (351)
T 3f3f_A 338 SNEFKCM 344 (351)
T ss_dssp TSCEEEE
T ss_pred Ccchhhe
Confidence 7654443
No 120
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.91 E-value=1.5e-22 Score=181.70 Aligned_cols=259 Identities=16% Similarity=0.202 Sum_probs=148.0
Q ss_pred CchhhccccccccccCcCcccccCCCcccceEEEEEcCC---CCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEE
Q 022074 12 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD---GRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVC 88 (303)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~---g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~ 88 (303)
+++.|..+.||+.-+|.... ...|...+.++.|++. +..+++++.||.|++||+.++.....+..|...|.+++
T Consensus 117 s~~~d~~i~iwd~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~ 193 (408)
T 4a11_B 117 SSSFDKTLKVWDTNTLQTAD---VFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVS 193 (408)
T ss_dssp EEETTSEEEEEETTTTEEEE---EEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEE
T ss_pred EEeCCCeEEEeeCCCCccce---eccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEE
Confidence 45667788889886554332 1236778999999984 45999999999999999999988888889999999999
Q ss_pred EccCCCcEEEEecCCCeEEEEcCccccC------------CCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEE
Q 022074 89 FGDESGHLIYSGSDDNLCKVWDRRCLNV------------KGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWD 156 (303)
Q Consensus 89 ~~~~~~~~l~s~s~dg~v~lWd~~~~~~------------~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWd 156 (303)
|+|+...+|++++.||.|++||++.... .......+.+|...|.++++++++++|++++.|+.|++||
T Consensus 194 ~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd 273 (408)
T 4a11_B 194 WSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWN 273 (408)
T ss_dssp ECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEE
Confidence 9876555799999999999999863221 0111222357889999999999999999999999999999
Q ss_pred cccccCCcccccCccc-eeeeceeee-CCCCCccccCCCC-----------CcceEEecccceeeeEEEeeeeeeeCCCe
Q 022074 157 IRKMSSNASCNLGFRS-YEWDYRWMD-YPPQARDLKHPCD-----------QSVATYKGHSVLRTLIRCHFSPVYSTGQK 223 (303)
Q Consensus 157 l~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 223 (303)
++.............. ......... .......+....+ ..+..+.+|.... ....|+|+++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v------~~~~~s~~~~ 347 (408)
T 4a11_B 274 SSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTV------DCCVFQSNFQ 347 (408)
T ss_dssp TTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCE------EEEEEETTTT
T ss_pred CCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeE------EEEEEcCCCC
Confidence 9864332111000000 000000000 0000000111111 1222333332111 2345789999
Q ss_pred EEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEECCC-CCeEEEEeCCCCEEEeecC
Q 022074 224 YIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPS-QPMLVSSSWDGDVVRWEFP 282 (303)
Q Consensus 224 ~latg~~dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~-~~~las~s~Dg~i~~Wd~~ 282 (303)
+|++|+.||.|++||+.+++.+.....+. ....++|. ...+.+.+.|+.+++|+.+
T Consensus 348 ~l~s~~~dg~i~iw~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 404 (408)
T 4a11_B 348 ELYSGSRDCNILAWVPSLYEPVPDDDETT---TKSQLNPAFEDAWSSSDEEGGTSAWSHP 404 (408)
T ss_dssp EEEEEETTSCEEEEEECC------------------------------------------
T ss_pred EEEEECCCCeEEEEeCCCCCccCCCCceE---eccccccccceeecccCccCceeecCCc
Confidence 99999999999999999988765544332 22334443 3456677889999999865
No 121
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.91 E-value=6.5e-22 Score=171.87 Aligned_cols=196 Identities=18% Similarity=0.308 Sum_probs=149.8
Q ss_pred ceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEE--ecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCC
Q 022074 41 GIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRI--LAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKG 118 (303)
Q Consensus 41 ~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~--~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~ 118 (303)
.+.+|+||+++ .|++| .|++|+|||+.+++....+ .+|...|.+++|++ ++++|++|+.||+|++||++ .+
T Consensus 27 y~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~-~~~~l~sgs~Dg~v~iw~~~----~~ 99 (318)
T 4ggc_A 27 YLNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIK-EGNYLAVGTSSAEVQLWDVQ----QQ 99 (318)
T ss_dssp TCBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECT-TSSEEEEEETTSEEEEEETT----TT
T ss_pred cceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECC-CCCEEEEEECCCcEEEeecC----Cc
Confidence 36789999876 66665 5999999999999876554 46778899999975 58899999999999999986 34
Q ss_pred ccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcce
Q 022074 119 KPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVA 198 (303)
Q Consensus 119 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (303)
+....+.+|...+.+++. ++..+++++.++.+++|+...... .+.
T Consensus 100 ~~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~---------------------------------~~~ 144 (318)
T 4ggc_A 100 KRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEH---------------------------------HVA 144 (318)
T ss_dssp EEEEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSC---------------------------------EEE
T ss_pred eeEEEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCce---------------------------------eEE
Confidence 556778889988887655 567999999999999998753211 112
Q ss_pred EEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeE----EEEeecCCCCeEEEEECCCCCe---EEEEe
Q 022074 199 TYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQ----VAALKYHTSPVRDCSWHPSQPM---LVSSS 271 (303)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~----~~~~~~h~~~I~~v~~sp~~~~---las~s 271 (303)
.+.+|..... ...++++++++++++.|+.|++||+.+++. ......|..+|..++|+|++.. +++++
T Consensus 145 ~~~~~~~~~~------~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 218 (318)
T 4ggc_A 145 TLSGHSQEVC------GLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGT 218 (318)
T ss_dssp EEECCSSCEE------EEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECT
T ss_pred EEcCccCceE------EEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecC
Confidence 2233322111 123567889999999999999999987652 3455678889999999998763 45778
Q ss_pred CCCCEEEeecCCC
Q 022074 272 WDGDVVRWEFPGN 284 (303)
Q Consensus 272 ~Dg~i~~Wd~~~~ 284 (303)
.++++++||....
T Consensus 219 ~~~~i~lwd~~~~ 231 (318)
T 4ggc_A 219 SDRHIRIWNVCSG 231 (318)
T ss_dssp TTCEEEEEETTTC
T ss_pred CCCEEEEEecccc
Confidence 8999999997654
No 122
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.90 E-value=4.2e-22 Score=177.55 Aligned_cols=203 Identities=10% Similarity=0.110 Sum_probs=145.6
Q ss_pred ceEEEEEcCCCCEE-EEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccC----------------CC---------
Q 022074 41 GIFSLKFSTDGREL-VAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDE----------------SG--------- 94 (303)
Q Consensus 41 ~v~~l~~s~~g~~l-~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~----------------~~--------- 94 (303)
++..+.+.++++.+ ++|+.|++|+|||+.+++....+. |...|.+++++++ ..
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~ 138 (355)
T 3vu4_A 60 HLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIR 138 (355)
T ss_dssp CCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEE
T ss_pred CeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEecc
Confidence 47778888888876 568889999999999998776554 5667888777532 01
Q ss_pred ---------cEEEE--ecCCCeEEEEcCccccC-----------CCcc-ceeecccccCeEEEEeCCCCCEEEEEeCCCc
Q 022074 95 ---------HLIYS--GSDDNLCKVWDRRCLNV-----------KGKP-AGVLMGHLEGITFIDSRGDGRYLISNGKDQA 151 (303)
Q Consensus 95 ---------~~l~s--~s~dg~v~lWd~~~~~~-----------~~~~-~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~ 151 (303)
..++. |+.||+|++||++.... ...+ ...+.+|...|.+++|+|++++|++++.|++
T Consensus 139 ~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~ 218 (355)
T 3vu4_A 139 FGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGT 218 (355)
T ss_dssp EEEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCS
T ss_pred CCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCC
Confidence 23333 67888889998753210 0012 5678899999999999999999999999999
Q ss_pred -EEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEe-c-ccceeeeEEEeeeeeeeCCCeEEEEE
Q 022074 152 -IKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYK-G-HSVLRTLIRCHFSPVYSTGQKYIYTG 228 (303)
Q Consensus 152 -v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~s~~~~~latg 228 (303)
|++||++.... +..+. + |.... ....|+|++++|+++
T Consensus 219 ~v~iwd~~~~~~----------------------------------~~~~~~g~h~~~v------~~~~~s~~~~~l~s~ 258 (355)
T 3vu4_A 219 IIRVFKTEDGVL----------------------------------VREFRRGLDRADV------VDMKWSTDGSKLAVV 258 (355)
T ss_dssp EEEEEETTTCCE----------------------------------EEEEECTTCCSCE------EEEEECTTSCEEEEE
T ss_pred EEEEEECCCCcE----------------------------------EEEEEcCCCCCcE------EEEEECCCCCEEEEE
Confidence 99999874321 12222 2 22111 233578899999999
Q ss_pred eCCCeEEEEECCCCeE--EEEee---------------------cCCCCeEEEEECCCCCeEEEEeCCCCEEEeecCCC
Q 022074 229 SHDSCVYVYDLVSGEQ--VAALK---------------------YHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 229 ~~dg~i~iwd~~~~~~--~~~~~---------------------~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~~ 284 (303)
+.|++|++||+..+.. ...+. .+..+...++|+|++++|++++.||.+++|++...
T Consensus 259 s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~ 337 (355)
T 3vu4_A 259 SDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFD 337 (355)
T ss_dssp ETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEE
T ss_pred ECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcC
Confidence 9999999999976531 11111 11234577999999999999999999999998644
No 123
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.88 E-value=5.6e-21 Score=173.58 Aligned_cols=232 Identities=14% Similarity=0.039 Sum_probs=163.4
Q ss_pred ceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEE-----EEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCcccc
Q 022074 41 GIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSL-----RILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLN 115 (303)
Q Consensus 41 ~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~-----~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~ 115 (303)
.+.+++|+|++..+++++.|++|++||+.+++... .+.+|...|.+++|+ ++++++++++.|+.|++||++
T Consensus 124 ~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~s~~~d~~v~~~d~~--- 199 (433)
T 3bws_A 124 QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIP-EHNELWVSQMQANAVHVFDLK--- 199 (433)
T ss_dssp CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEG-GGTEEEEEEGGGTEEEEEETT---
T ss_pred CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEc-CCCEEEEEECCCCEEEEEECC---
Confidence 45689999977788888889999999999988765 234678899999995 467899999999999999975
Q ss_pred CCCccceeecccccCeEEEEeCCCCCEEE-EEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCC-
Q 022074 116 VKGKPAGVLMGHLEGITFIDSRGDGRYLI-SNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPC- 193 (303)
Q Consensus 116 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 193 (303)
..+....+..|...+.++++++++++++ +++.|+.|++||++........... .....+.+.+....+....
T Consensus 200 -~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-----~~~~~~~~~~~g~~l~~~~~ 273 (433)
T 3bws_A 200 -TLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-----GLPRGLLLSKDGKELYIAQF 273 (433)
T ss_dssp -TCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-----SEEEEEEECTTSSEEEEEEE
T ss_pred -CceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-----CCceEEEEcCCCCEEEEEEC
Confidence 3344556667888999999999998885 5558999999998754322211111 0122233444433332211
Q ss_pred --------CCcceEEecccc--eeee--EEEeeeeeeeCCCe-EEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEE
Q 022074 194 --------DQSVATYKGHSV--LRTL--IRCHFSPVYSTGQK-YIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSW 260 (303)
Q Consensus 194 --------~~~~~~~~~~~~--~~~~--~~~~~~~~~s~~~~-~latg~~dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~ 260 (303)
+..+..++-... .... ........|+|+++ ++++++.|+.|++||+.+++.+..+. +...+.+++|
T Consensus 274 ~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~ 352 (433)
T 3bws_A 274 SASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIAL 352 (433)
T ss_dssp ESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEE
T ss_pred CCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEE
Confidence 122333332111 1100 11122345788885 55777899999999999998887775 6778999999
Q ss_pred CCCCCeEEEEeC---------------CCCEEEeecCC
Q 022074 261 HPSQPMLVSSSW---------------DGDVVRWEFPG 283 (303)
Q Consensus 261 sp~~~~las~s~---------------Dg~i~~Wd~~~ 283 (303)
+|++++|++++. ||.+++||...
T Consensus 353 s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~ 390 (433)
T 3bws_A 353 SPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTT 390 (433)
T ss_dssp CTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTT
T ss_pred cCCCCEEEEEecCCCccccccccccccceEEEEEECCC
Confidence 999998888877 57999999864
No 124
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.87 E-value=4.1e-21 Score=168.04 Aligned_cols=157 Identities=16% Similarity=0.145 Sum_probs=108.0
Q ss_pred CcccceEEEEEcC---CCCEEEEeeCCCeEEEEECCCCceEEEEeccc---CCeEEEEEccCCCcEE------------E
Q 022074 37 GYSFGIFSLKFST---DGRELVAGSSDDCIYVYDLEANKLSLRILAHT---SDVNTVCFGDESGHLI------------Y 98 (303)
Q Consensus 37 ~~~~~v~~l~~s~---~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~---~~v~~l~~~~~~~~~l------------~ 98 (303)
+|...+..++|++ +++.|++|+.|++|+|||+++++...++.+|. ..+.+++|+| ++.++ +
T Consensus 176 ~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSp-dG~~lvs~s~~~~~w~la 254 (356)
T 2w18_A 176 LMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSE-MGLLFIVLSHPCAKESES 254 (356)
T ss_dssp ECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEE-TTEEEEEEC---------
T ss_pred cCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECC-CCCEEEEeccCCCcceee
Confidence 5555555555555 45678899999999999999999888887654 3677778976 46654 6
Q ss_pred EecCCCeEEEEcCccccCCCccceee-----cccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccce
Q 022074 99 SGSDDNLCKVWDRRCLNVKGKPAGVL-----MGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSY 173 (303)
Q Consensus 99 s~s~dg~v~lWd~~~~~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~ 173 (303)
+|+.|++|++||.. +++....+ .+|...+...++ ++.++++++.|++|+|||++..+
T Consensus 255 SGs~D~tIklWd~~----tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk------------ 316 (356)
T 2w18_A 255 LRSPVFQLIVINPK----TTLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQ------------ 316 (356)
T ss_dssp ---CCEEEEEEETT----TTEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCS------------
T ss_pred ccCCCcEEEEEECC----CCEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCc------------
Confidence 78899999999975 22222222 467666544444 37789999999999999986532
Q ss_pred eeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEEC
Q 022074 174 EWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDL 239 (303)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~ 239 (303)
.+.++.+|..... ....|||++++|++|+.|++|+|||+
T Consensus 317 ----------------------~l~tL~gH~~~vv-----s~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 317 ----------------------CTALLPPVSDQHW-----SFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp ----------------------EEEEECCC--CCC-----CEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred ----------------------EEEEecCCCCCeE-----EEEEECCCCCEEEEEECCCcEEEecC
Confidence 2233444421110 12358899999999999999999995
No 125
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.87 E-value=6.1e-20 Score=167.12 Aligned_cols=215 Identities=15% Similarity=0.093 Sum_probs=158.0
Q ss_pred ccccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEeeCCC---eEEEEECCCCceEEEEecccCCeEEEEEccCC
Q 022074 17 SLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDD---CIYVYDLEANKLSLRILAHTSDVNTVCFGDES 93 (303)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg---~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~ 93 (303)
..+.+|+. +|.+. ....+|...+.+++|+|||++|++++.|+ .|++||+.+++.. .+..|...+.+++|+|+
T Consensus 159 ~~i~i~d~-~g~~~--~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spd- 233 (415)
T 2hqs_A 159 YELRVSDY-DGYNQ--FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPD- 233 (415)
T ss_dssp EEEEEEET-TSCSC--EEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTT-
T ss_pred ceEEEEcC-CCCCC--EEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCC-
Confidence 56667776 34332 23357888999999999999999999885 9999999998764 57778889999999865
Q ss_pred CcEEE-EecCCCe--EEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeC-CC--cEEEEEcccccCCcccc
Q 022074 94 GHLIY-SGSDDNL--CKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGK-DQ--AIKLWDIRKMSSNASCN 167 (303)
Q Consensus 94 ~~~l~-s~s~dg~--v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-D~--~v~lWdl~~~~~~~~~~ 167 (303)
++.|+ +++.++. |++||++. + ....+..|...+..+.|+|+|++|+.++. ++ .|.+||+......
T Consensus 234 g~~la~~~~~~g~~~i~~~d~~~----~-~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~---- 304 (415)
T 2hqs_A 234 GSKLAFALSKTGSLNLYVMDLAS----G-QIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQ---- 304 (415)
T ss_dssp SSEEEEEECTTSSCEEEEEETTT----C-CEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCE----
T ss_pred CCEEEEEEecCCCceEEEEECCC----C-CEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEE----
Confidence 66555 7776654 89999752 2 23456678888999999999999988775 55 4555566432100
Q ss_pred cCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCC---CeEEEEECCCCeE
Q 022074 168 LGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHD---SCVYVYDLVSGEQ 244 (303)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~d---g~i~iwd~~~~~~ 244 (303)
.+..+.. ....+.|+|++++|++++.+ ..|++||+.+++.
T Consensus 305 -------------------------------~l~~~~~------~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~ 347 (415)
T 2hqs_A 305 -------------------------------RITWEGS------QNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV 347 (415)
T ss_dssp -------------------------------ECCCSSS------EEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE
T ss_pred -------------------------------EEecCCC------cccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE
Confidence 0000000 01235688999999988764 6899999998876
Q ss_pred EEEeecCCCCeEEEEECCCCCeEEEEeCCC---CEEEeecCCC
Q 022074 245 VAALKYHTSPVRDCSWHPSQPMLVSSSWDG---DVVRWEFPGN 284 (303)
Q Consensus 245 ~~~~~~h~~~I~~v~~sp~~~~las~s~Dg---~i~~Wd~~~~ 284 (303)
..+..|. .+.+++|+|++++|++++.|+ .|++||+.+.
T Consensus 348 -~~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~ 388 (415)
T 2hqs_A 348 -QVLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGR 388 (415)
T ss_dssp -EECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSC
T ss_pred -EEecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCC
Confidence 4455554 899999999999999988887 7999998754
No 126
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.87 E-value=1.1e-20 Score=166.97 Aligned_cols=211 Identities=14% Similarity=0.167 Sum_probs=136.6
Q ss_pred ECCCCceEEEEecccCCeEEEEEccCC--CcEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEE
Q 022074 67 DLEANKLSLRILAHTSDVNTVCFGDES--GHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLI 144 (303)
Q Consensus 67 d~~~~~~~~~~~~h~~~v~~l~~~~~~--~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 144 (303)
+....+....+.+|.+.|++++|+|+. +++|++|+.||.|++||++.. .......+.+|...|.++.|++++++|+
T Consensus 25 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~--~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 102 (368)
T 3mmy_A 25 NHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDS--GQTIPKAQQMHTGPVLDVCWSDDGSKVF 102 (368)
T ss_dssp SSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTT--SCEEEEEEEECSSCEEEEEECTTSSEEE
T ss_pred CCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCC--CceeEEEeccccCCEEEEEECcCCCEEE
Confidence 344445555677899999999998764 689999999999999997521 1122356778999999999999999999
Q ss_pred EEeCCCcEEEEEcccccCCcccccCccceeeeceeeeC--CCCCccccCC------------CCCcceEEeccccee---
Q 022074 145 SNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDY--PPQARDLKHP------------CDQSVATYKGHSVLR--- 207 (303)
Q Consensus 145 s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~------------~~~~~~~~~~~~~~~--- 207 (303)
+++.|+.|++||++........... ..+..+.+ .+....+... ....+..+..+....
T Consensus 103 s~~~dg~v~iwd~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 177 (368)
T 3mmy_A 103 TASCDKTAKMWDLSSNQAIQIAQHD-----APVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCAD 177 (368)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECS-----SCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEE
T ss_pred EEcCCCcEEEEEcCCCCceeecccc-----CceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEE
Confidence 9999999999998764322111110 00111111 1111111100 011111111110000
Q ss_pred ---------------ee---------EEE--------eeeeeeeC----CCeEEEEEeCCCeEEEEECCCC---eEEEEe
Q 022074 208 ---------------TL---------IRC--------HFSPVYST----GQKYIYTGSHDSCVYVYDLVSG---EQVAAL 248 (303)
Q Consensus 208 ---------------~~---------~~~--------~~~~~~s~----~~~~latg~~dg~i~iwd~~~~---~~~~~~ 248 (303)
.+ ... .....+.+ ....+++++.||.|++||+... +.+..+
T Consensus 178 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~ 257 (368)
T 3mmy_A 178 VIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTF 257 (368)
T ss_dssp EETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEE
T ss_pred ecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceee
Confidence 00 000 00000111 1233999999999999999887 456677
Q ss_pred ecCCC------------CeEEEEECCCCCeEEEEeCCCCEEEeecCCC
Q 022074 249 KYHTS------------PVRDCSWHPSQPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 249 ~~h~~------------~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~~ 284 (303)
..|.. +|++++|+|++++|++++.||.|++||+...
T Consensus 258 ~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~ 305 (368)
T 3mmy_A 258 KCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDAR 305 (368)
T ss_dssp ECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTT
T ss_pred eeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCC
Confidence 77775 7999999999999999999999999998743
No 127
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.85 E-value=2.9e-19 Score=160.12 Aligned_cols=185 Identities=15% Similarity=0.139 Sum_probs=138.4
Q ss_pred CEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCccceeecccccCe
Q 022074 52 RELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGI 131 (303)
Q Consensus 52 ~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v 131 (303)
..+++++.|++|++||+.+++....+..| ..+.+++|+++...++++++.|++|++||+. .++....+..+ ..+
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~----~~~~~~~~~~~-~~v 76 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTA----TNNVIATVPAG-SSP 76 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETT----TTEEEEEEECS-SSE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecC-CCcceEEECCCCCEEEEECCCCCeEEEEECC----CCeEEEEEECC-CCc
Confidence 35788899999999999999877766655 4589999976533345788899999999975 23334444433 389
Q ss_pred EEEEeCCCCCEEE-EEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeE
Q 022074 132 TFIDSRGDGRYLI-SNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLI 210 (303)
Q Consensus 132 ~~~~~~~~~~~l~-s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (303)
.++++++++++++ +++.|+.|++||+..... +..+..+..
T Consensus 77 ~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~----------------------------------~~~~~~~~~----- 117 (391)
T 1l0q_A 77 QGVAVSPDGKQVYVTNMASSTLSVIDTTSNTV----------------------------------AGTVKTGKS----- 117 (391)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEETTTTEE----------------------------------EEEEECSSS-----
T ss_pred cceEECCCCCEEEEEECCCCEEEEEECCCCeE----------------------------------EEEEeCCCC-----
Confidence 9999999999875 555679999999864221 011111110
Q ss_pred EEeeeeeeeCCCeEE-EEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEECCCCCeE-EEEeCCCCEEEeecCCC
Q 022074 211 RCHFSPVYSTGQKYI-YTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPML-VSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 211 ~~~~~~~~s~~~~~l-atg~~dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~~l-as~s~Dg~i~~Wd~~~~ 284 (303)
.....++++++++ ++++.|+.|++||+.+++.+..+..|. .+.+++|+|+++.| ++++.|+.+++||+...
T Consensus 118 --~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~ 190 (391)
T 1l0q_A 118 --PLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR-SPKGIAVTPDGTKVYVANFDSMSISVIDTVTN 190 (391)
T ss_dssp --EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred --cceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCC-CcceEEECCCCCEEEEEeCCCCEEEEEECCCC
Confidence 0123477888876 788889999999999999888887664 57999999999876 68888999999998654
No 128
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.83 E-value=2.4e-19 Score=164.21 Aligned_cols=202 Identities=13% Similarity=0.105 Sum_probs=144.0
Q ss_pred cceEEEEEcCCCCEEEEeeCCCeEEEEECCCC-----------ceE----EEEecccCCeEEEEEccCCCcEEE----Ee
Q 022074 40 FGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN-----------KLS----LRILAHTSDVNTVCFGDESGHLIY----SG 100 (303)
Q Consensus 40 ~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~-----------~~~----~~~~~h~~~v~~l~~~~~~~~~l~----s~ 100 (303)
..+..+++++++..+++++.|+ +++|+...- ... .....+...|.+++|++ ++++|+ ++
T Consensus 37 ~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp-dg~~lav~~~sg 114 (434)
T 2oit_A 37 ERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSC-DNLTLSACMMSS 114 (434)
T ss_dssp SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECT-TSCEEEEEEEET
T ss_pred CCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcC-CCCEEEEEEecc
Confidence 3578899999999999999998 899865311 110 01234566799999976 477888 89
Q ss_pred cCCCeEEEEcCcccc----CCCc---cceeecccccCeEEEEeCCC-CCEEEEEeCCCcEEEEEcccccCCcccccCccc
Q 022074 101 SDDNLCKVWDRRCLN----VKGK---PAGVLMGHLEGITFIDSRGD-GRYLISNGKDQAIKLWDIRKMSSNASCNLGFRS 172 (303)
Q Consensus 101 s~dg~v~lWd~~~~~----~~~~---~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~ 172 (303)
+.|++|++||++... ...+ ....+.+|...|.+++|+|+ +++|++++.|++|++||++....
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~---------- 184 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVK---------- 184 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEE----------
T ss_pred CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcc----------
Confidence 999999999975321 0001 13456679999999999997 78999999999999999974210
Q ss_pred eeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEeecCC
Q 022074 173 YEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHT 252 (303)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~h~ 252 (303)
+....+|.... .+..|+|++++|++|+.||.|++||.+ ++....+..|.
T Consensus 185 ------------------------~~~~~~~~~~v------~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~ 233 (434)
T 2oit_A 185 ------------------------VCATLPSTVAV------TSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPP 233 (434)
T ss_dssp ------------------------EEEEECGGGCE------EEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCT
T ss_pred ------------------------eeeccCCCCce------eEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCc
Confidence 00111111111 123478899999999999999999998 55555554442
Q ss_pred -------CCeEEEEECCCCCeEEE-EeCCCC------EEEeecCCC
Q 022074 253 -------SPVRDCSWHPSQPMLVS-SSWDGD------VVRWEFPGN 284 (303)
Q Consensus 253 -------~~I~~v~~sp~~~~las-~s~Dg~------i~~Wd~~~~ 284 (303)
..|.+++|++++.++++ ++.||. +++|++...
T Consensus 234 ~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 234 FYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp TCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred ccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 38999999999887754 334433 889998753
No 129
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.83 E-value=7.5e-19 Score=153.89 Aligned_cols=263 Identities=13% Similarity=0.106 Sum_probs=159.4
Q ss_pred hhhccccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEeeCC-CeEEEEECC--CCceE--EEEecccCCeEEEE
Q 022074 14 TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD-DCIYVYDLE--ANKLS--LRILAHTSDVNTVC 88 (303)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~D-g~v~lwd~~--~~~~~--~~~~~h~~~v~~l~ 88 (303)
+.+..+.||+.-...+........|...+.+++|+|+|++|++++.+ +.|++|++. ++... ..+..+ ..+..++
T Consensus 12 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 90 (343)
T 1ri6_A 12 PESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP-GSLTHIS 90 (343)
T ss_dssp GGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS-SCCSEEE
T ss_pred CCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC-CCCcEEE
Confidence 45677888877332222222224566778999999999999998886 899999997 55532 223333 3788999
Q ss_pred EccCCCcEEE-EecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEe-CCCcEEEEEccc-ccCCcc
Q 022074 89 FGDESGHLIY-SGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNG-KDQAIKLWDIRK-MSSNAS 165 (303)
Q Consensus 89 ~~~~~~~~l~-s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~D~~v~lWdl~~-~~~~~~ 165 (303)
|+++ ++.++ ++..++.|++||+. ..........+.. ...+..+.++++++++++++ .++.|++||+.. ......
T Consensus 91 ~s~d-g~~l~~~~~~~~~i~~~d~~-~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~ 167 (343)
T 1ri6_A 91 TDHQ-GQFVFVGSYNAGNVSVTRLE-DGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQ 167 (343)
T ss_dssp ECTT-SSEEEEEETTTTEEEEEEEE-TTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEE
T ss_pred EcCC-CCEEEEEecCCCeEEEEECC-CCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeee
Confidence 9764 56554 44568999999973 1111122233332 33577888999999888777 899999999875 211100
Q ss_pred c--ccCccceeeeceeeeCCCCCccccCC--CCCcceEEeccc---ce--eeeEE----------EeeeeeeeCCCeEEE
Q 022074 166 C--NLGFRSYEWDYRWMDYPPQARDLKHP--CDQSVATYKGHS---VL--RTLIR----------CHFSPVYSTGQKYIY 226 (303)
Q Consensus 166 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~---~~--~~~~~----------~~~~~~~s~~~~~la 226 (303)
. .... ........+.+.++.+.+... ....+..++-.. .. ..... ......|+|++++|+
T Consensus 168 ~~~~~~~-~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~ 246 (343)
T 1ri6_A 168 DPAEVTT-VEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLY 246 (343)
T ss_dssp EEEEEEC-STTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEE
T ss_pred ccccccc-CCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEE
Confidence 0 0000 000011223444554433211 122233222110 00 00000 011245788998776
Q ss_pred -EEeCCCeEEEEECC--C--CeEEEEeecCCCCeEEEEECCCCCeEEEEe-CCCCEEEeecC
Q 022074 227 -TGSHDSCVYVYDLV--S--GEQVAALKYHTSPVRDCSWHPSQPMLVSSS-WDGDVVRWEFP 282 (303)
Q Consensus 227 -tg~~dg~i~iwd~~--~--~~~~~~~~~h~~~I~~v~~sp~~~~las~s-~Dg~i~~Wd~~ 282 (303)
++..++.|++||+. + .+.+..+..+.. +.+++|+|++++|++++ .++.+.+|++.
T Consensus 247 v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 247 ACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp EEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred EEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 45589999999998 3 344555555544 89999999999888777 68999999664
No 130
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.83 E-value=6e-19 Score=150.71 Aligned_cols=227 Identities=16% Similarity=0.108 Sum_probs=157.0
Q ss_pred ccCchhhccccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCC-CceEEEEecc-cCCeEEE
Q 022074 10 VGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEA-NKLSLRILAH-TSDVNTV 87 (303)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~-~~~~~~~~~h-~~~v~~l 87 (303)
.+.++.+..+.+|+.-+|... ...+|...|.+++|+|+|+++++++ ++.|++||+.+ ++.......+ ...+.++
T Consensus 15 ~~~~~~~~~i~~~d~~~~~~~---~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 90 (297)
T 2ojh_A 15 GPGGSMRSSIEIFNIRTRKMR---VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDH 90 (297)
T ss_dssp ---CCCCEEEEEEETTTTEEE---EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCC
T ss_pred cCCCCcceeEEEEeCCCCcee---eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccce
Confidence 345667778888887554422 2345788899999999999999986 78999999998 7765444455 3678899
Q ss_pred EEccCCCcEEEEec--CCCeEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEE-EEeCCCcEEEEEcccccCCc
Q 022074 88 CFGDESGHLIYSGS--DDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLI-SNGKDQAIKLWDIRKMSSNA 164 (303)
Q Consensus 88 ~~~~~~~~~l~s~s--~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~D~~v~lWdl~~~~~~~ 164 (303)
+|+| +++.|++++ .++..++|..+.. ......+..+ ..+..+.++|++++|+ +++.|+.+++|+++......
T Consensus 91 ~~sp-dg~~l~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~ 165 (297)
T 2ojh_A 91 GISP-DGALYAISDKVEFGKSAIYLLPST---GGTPRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVE 165 (297)
T ss_dssp EECT-TSSEEEEEECTTTSSCEEEEEETT---CCCCEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCE
T ss_pred EECC-CCCEEEEEEeCCCCcceEEEEECC---CCceEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcc
Confidence 9976 577888887 4456666654311 1122333333 3488889999999887 78899999999875321100
Q ss_pred ccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEe-CCCeEEEEECC-CC
Q 022074 165 SCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGS-HDSCVYVYDLV-SG 242 (303)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~-~dg~i~iwd~~-~~ 242 (303)
..+..+.. ....+.++|++++|+.++ .++.+++|++. .+
T Consensus 166 ---------------------------------~~~~~~~~------~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~ 206 (297)
T 2ojh_A 166 ---------------------------------TRLTHGEG------RNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDG 206 (297)
T ss_dssp ---------------------------------EECCCSSS------CEEEEEECTTSSEEEEEECTTSSCEEEEEETTS
T ss_pred ---------------------------------eEcccCCC------ccccceECCCCCEEEEEecCCCCccEEEECCCC
Confidence 00000000 001345788898877766 58999999886 45
Q ss_pred eEEEEeecCCCCeEEEEECCCCCeEEEEeCC-----------CCEEEeecCCC
Q 022074 243 EQVAALKYHTSPVRDCSWHPSQPMLVSSSWD-----------GDVVRWEFPGN 284 (303)
Q Consensus 243 ~~~~~~~~h~~~I~~v~~sp~~~~las~s~D-----------g~i~~Wd~~~~ 284 (303)
..+..+..|...+..++|+|++++|+.++.+ +.|.+||+.+.
T Consensus 207 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~ 259 (297)
T 2ojh_A 207 SSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGG 259 (297)
T ss_dssp SCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSC
T ss_pred CCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCC
Confidence 5567777888899999999999999888876 56999998654
No 131
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.81 E-value=7.1e-19 Score=160.06 Aligned_cols=223 Identities=9% Similarity=0.051 Sum_probs=160.7
Q ss_pred chhhcccccccc--ccCcCcccccCCCcccceEEEEEcC--------------CCCEEEEeeCC------CeEEEEECCC
Q 022074 13 GTMESLANVTEI--HDGLDFSAADDGGYSFGIFSLKFST--------------DGRELVAGSSD------DCIYVYDLEA 70 (303)
Q Consensus 13 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~l~~s~--------------~g~~l~sgs~D------g~v~lwd~~~ 70 (303)
|.++-.+.+|+. -+|.........||...+..+++++ .+..++.++.+ ++|++||+++
T Consensus 89 G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g 168 (415)
T 2hqs_A 89 GSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDG 168 (415)
T ss_dssp SCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTS
T ss_pred CeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCC
Confidence 445557788888 7776443445577887777777664 25666666654 7999999986
Q ss_pred CceEEEEecccCCeEEEEEccCCCcEEEEecCCC---eEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEE-EE
Q 022074 71 NKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDN---LCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLI-SN 146 (303)
Q Consensus 71 ~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg---~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~ 146 (303)
+. ...+..|...+.+++|+| +++.|++++.++ .|++||++. ++ ...+..|...+.+++|+|+|++|+ ++
T Consensus 169 ~~-~~~l~~~~~~v~~~~~Sp-dg~~la~~s~~~~~~~i~~~d~~t----g~-~~~l~~~~~~~~~~~~spdg~~la~~~ 241 (415)
T 2hqs_A 169 YN-QFVVHRSPQPLMSPAWSP-DGSKLAYVTFESGRSALVIQTLAN----GA-VRQVASFPRHNGAPAFSPDGSKLAFAL 241 (415)
T ss_dssp CS-CEEEEEESSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTT----CC-EEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred CC-CEEEeCCCCcceeeEEcC-CCCEEEEEEecCCCcEEEEEECCC----Cc-EEEeecCCCcccCEEEcCCCCEEEEEE
Confidence 54 456778999999999976 578888888775 999999863 22 234567888899999999999887 67
Q ss_pred eCCCc--EEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeE
Q 022074 147 GKDQA--IKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKY 224 (303)
Q Consensus 147 ~~D~~--v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 224 (303)
+.|+. |++||++.... ..+..+.. ....+.|+|++++
T Consensus 242 ~~~g~~~i~~~d~~~~~~-----------------------------------~~l~~~~~------~~~~~~~spdg~~ 280 (415)
T 2hqs_A 242 SKTGSLNLYVMDLASGQI-----------------------------------RQVTDGRS------NNTEPTWFPDSQN 280 (415)
T ss_dssp CTTSSCEEEEEETTTCCE-----------------------------------EECCCCSS------CEEEEEECTTSSE
T ss_pred ecCCCceEEEEECCCCCE-----------------------------------EeCcCCCC------cccceEECCCCCE
Confidence 66665 88888764211 00011110 0123568899999
Q ss_pred EEEEeC-CC--eEEEEECCCCeEEEEeecCCCCeEEEEECCCCCeEEEEeCC---CCEEEeecCCC
Q 022074 225 IYTGSH-DS--CVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWD---GDVVRWEFPGN 284 (303)
Q Consensus 225 latg~~-dg--~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~~las~s~D---g~i~~Wd~~~~ 284 (303)
|+.++. ++ .|++||+.+++. ..+..|...+.+++|||++++|++++.+ ..|.+||+.+.
T Consensus 281 l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~ 345 (415)
T 2hqs_A 281 LAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATG 345 (415)
T ss_dssp EEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTC
T ss_pred EEEEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCC
Confidence 988876 44 788889988764 4455677789999999999999988865 58999998754
No 132
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.80 E-value=2.9e-17 Score=154.48 Aligned_cols=261 Identities=14% Similarity=0.092 Sum_probs=172.6
Q ss_pred chhhccccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEEC--CCCceEEEEecccCCeEEEEEc
Q 022074 13 GTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDL--EANKLSLRILAHTSDVNTVCFG 90 (303)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~--~~~~~~~~~~~h~~~v~~l~~~ 90 (303)
++.+..+.||+.-+|.-. .....||. +.+++|+|||++|++++.|++|++||+ .+++...++. +...+..++|+
T Consensus 155 ~~~d~~V~v~D~~t~~~~-~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~va~s 230 (543)
T 1nir_A 155 LRDAGQIALVDGDSKKIV-KVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIEARSVESS 230 (543)
T ss_dssp EGGGTEEEEEETTTCCEE-EEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSEEEEEEEC
T ss_pred EcCCCeEEEEECCCceEE-EEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCCcceEEeC
Confidence 556677888877665432 22334665 889999999999999999999999999 7877666655 45678999997
Q ss_pred cC---CCcEEEEec-CCCeEEEEcCccccCCCccceeecc----------ccc-CeEEEEeCCCCCE-EEEEeCCCcEEE
Q 022074 91 DE---SGHLIYSGS-DDNLCKVWDRRCLNVKGKPAGVLMG----------HLE-GITFIDSRGDGRY-LISNGKDQAIKL 154 (303)
Q Consensus 91 ~~---~~~~l~s~s-~dg~v~lWd~~~~~~~~~~~~~~~~----------h~~-~v~~~~~~~~~~~-l~s~~~D~~v~l 154 (303)
|- +++++++++ .+++|.+||... .++...+.. |.+ .+..+.+++++.. +++...+++|.+
T Consensus 231 p~~~~dg~~l~v~~~~~~~v~v~D~~t----~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~v 306 (543)
T 1nir_A 231 KFKGYEDRYTIAGAYWPPQFAIMDGET----LEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLL 306 (543)
T ss_dssp CSTTCTTTEEEEEEEESSEEEEEETTT----CCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEE
T ss_pred CCcCCCCCEEEEEEccCCeEEEEeccc----cccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEE
Confidence 50 477877777 589999999753 333333332 333 6888889987655 567778999999
Q ss_pred EEcccccCCcccccCccceeeeceeeeCCCCCccccCC--CCCcceEEecccc-eeeeEEE----ee--eee-eeCC-Ce
Q 022074 155 WDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHP--CDQSVATYKGHSV-LRTLIRC----HF--SPV-YSTG-QK 223 (303)
Q Consensus 155 Wdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~----~~--~~~-~s~~-~~ 223 (303)
||+............. .-....+.+.|+.+.+... .+..+..++-... ....+.. |. ... ++|+ +.
T Consensus 307 vd~~~~~~l~~~~i~~---~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~ 383 (543)
T 1nir_A 307 VNYKDIDNLTVTSIGA---APFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGP 383 (543)
T ss_dssp EECTTSSSCEEEEEEC---CSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEE
T ss_pred EEecCCCcceeEEecc---CcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCcc
Confidence 9987543211000000 0001122334444433211 1223333332211 1111111 10 111 3465 67
Q ss_pred EEEEEe-CCCeEEEEECCC-------CeEEEEeecCCCCeEEEEECCCCCeEEEEe-------CCCCEEEeecCCC
Q 022074 224 YIYTGS-HDSCVYVYDLVS-------GEQVAALKYHTSPVRDCSWHPSQPMLVSSS-------WDGDVVRWEFPGN 284 (303)
Q Consensus 224 ~latg~-~dg~i~iwd~~~-------~~~~~~~~~h~~~I~~v~~sp~~~~las~s-------~Dg~i~~Wd~~~~ 284 (303)
+++++. .|++|.+||..+ ++.+.+++.|...+..++|||++++|.+++ .+++|.+||+...
T Consensus 384 ~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~ 459 (543)
T 1nir_A 384 VWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNL 459 (543)
T ss_dssp EEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCT
T ss_pred EEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCC
Confidence 777775 689999999988 888999999998999999999999999987 3789999998754
No 133
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.78 E-value=2.6e-17 Score=159.65 Aligned_cols=237 Identities=9% Similarity=0.008 Sum_probs=154.4
Q ss_pred cceEEEEEcCCCCEEEEeeC-CC-----eEEEEECCCCceEEEEecccC------------------------CeEEEEE
Q 022074 40 FGIFSLKFSTDGRELVAGSS-DD-----CIYVYDLEANKLSLRILAHTS------------------------DVNTVCF 89 (303)
Q Consensus 40 ~~v~~l~~s~~g~~l~sgs~-Dg-----~v~lwd~~~~~~~~~~~~h~~------------------------~v~~l~~ 89 (303)
..+.+++|||||++|++++. |+ +|++||+.+++....+..+.. .+..++|
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 116 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQW 116 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEE
T ss_pred CCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEE
Confidence 35899999999999999998 88 899999999876655544432 2788999
Q ss_pred ccCCCcEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccC
Q 022074 90 GDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLG 169 (303)
Q Consensus 90 ~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~ 169 (303)
+| +++.|++++. +.|++||+..... .....+..|...+..+.|+|||++|+.++ ++.|++||+............
T Consensus 117 Sp-Dg~~l~~~~~-~~i~~~d~~~~~~--~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~ 191 (741)
T 2ecf_A 117 SP-DAQRLLFPLG-GELYLYDLKQEGK--AAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADG 191 (741)
T ss_dssp CT-TSSEEEEEET-TEEEEEESSSCST--TSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCC
T ss_pred CC-CCCEEEEEeC-CcEEEEECCCCCc--ceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCC
Confidence 76 5778887775 8999999763200 02334566778899999999999999887 469999998653211110000
Q ss_pred cccee-----e-------eceeeeCCCCCccccCCCC-C---------------------------------cceEEecc
Q 022074 170 FRSYE-----W-------DYRWMDYPPQARDLKHPCD-Q---------------------------------SVATYKGH 203 (303)
Q Consensus 170 ~~~~~-----~-------~~~~~~~~~~~~~~~~~~~-~---------------------------------~~~~~~~~ 203 (303)
...+. | ......++|+.+.+..... . .+..++-.
T Consensus 192 ~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~ 271 (741)
T 2ecf_A 192 STTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPA 271 (741)
T ss_dssp CSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSS
T ss_pred ccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECC
Confidence 00000 0 0112334444443322110 0 11111111
Q ss_pred c-c-eeee------EEEeeeeeeeCCCeEEEEEeC-----CCeEEEEECCCCeEEEEeecCCC----CeEEEEECCCCCe
Q 022074 204 S-V-LRTL------IRCHFSPVYSTGQKYIYTGSH-----DSCVYVYDLVSGEQVAALKYHTS----PVRDCSWHPSQPM 266 (303)
Q Consensus 204 ~-~-~~~~------~~~~~~~~~s~~~~~latg~~-----dg~i~iwd~~~~~~~~~~~~h~~----~I~~v~~sp~~~~ 266 (303)
. . ...+ ......+.| ||+++|+.++. +..|++||..+++....+..|.. .+.+++||||+++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~ 350 (741)
T 2ecf_A 272 EQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSI 350 (741)
T ss_dssp TTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCE
T ss_pred CCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeE
Confidence 1 0 0000 012234567 88998887654 67899999999987666665543 4578999999999
Q ss_pred EEEEeCCCCEEEeecC
Q 022074 267 LVSSSWDGDVVRWEFP 282 (303)
Q Consensus 267 las~s~Dg~i~~Wd~~ 282 (303)
+++++.||..++|.+.
T Consensus 351 ~~~~~~~g~~~l~~~~ 366 (741)
T 2ecf_A 351 LWSSERTGFQHLYRID 366 (741)
T ss_dssp EEEECTTSSCEEEEEC
T ss_pred EEEecCCCccEEEEEc
Confidence 9999999999998875
No 134
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.78 E-value=9.3e-17 Score=140.15 Aligned_cols=255 Identities=9% Similarity=0.001 Sum_probs=158.7
Q ss_pred chhhccccccccccCcCcccccCCCccc-ceEEEEEcCCCCEEE-EeeCCCeEEEEECCCCceEEEEec-c----cCCeE
Q 022074 13 GTMESLANVTEIHDGLDFSAADDGGYSF-GIFSLKFSTDGRELV-AGSSDDCIYVYDLEANKLSLRILA-H----TSDVN 85 (303)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~l~~s~~g~~l~-sgs~Dg~v~lwd~~~~~~~~~~~~-h----~~~v~ 85 (303)
++.+..+.+|+.-+|... .....++.. .+..++|+|+|++++ +++.++.|.+||+.+++....+.. + ...+.
T Consensus 7 ~~~~~~v~~~d~~~~~~~-~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~ 85 (337)
T 1pby_B 7 PARPDKLVVIDTEKMAVD-KVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLF 85 (337)
T ss_dssp EETTTEEEEEETTTTEEE-EEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTT
T ss_pred cCCCCeEEEEECCCCcEE-EEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccccccc
Confidence 344566777776555432 222233433 377899999998765 455688999999999887655442 2 22567
Q ss_pred EEEEccCCCcEEEEec------------CCCeEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEE
Q 022074 86 TVCFGDESGHLIYSGS------------DDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIK 153 (303)
Q Consensus 86 ~l~~~~~~~~~l~s~s------------~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~ 153 (303)
.++|++ +++.+++++ .++.|.+||+.. .+....+.. ...+..+.+++++++++++ ++.|.
T Consensus 86 ~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~----~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~ 157 (337)
T 1pby_B 86 GAALSP-DGKTLAIYESPVRLELTHFEVQPTRVALYDAET----LSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLH 157 (337)
T ss_dssp CEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEETTT----TEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEE
T ss_pred ceEECC-CCCEEEEEecccccccccccccCceEEEEECCC----CcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEE
Confidence 889975 466777775 579999999752 222333322 3456778899999988887 68999
Q ss_pred EEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCC-------------------------cceEEecccceee
Q 022074 154 LWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQ-------------------------SVATYKGHSVLRT 208 (303)
Q Consensus 154 lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~ 208 (303)
+||+............... ....+.++...+...... .+..++.......
T Consensus 158 ~~d~~~~~~~~~~~~~~~~-----~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 232 (337)
T 1pby_B 158 VMDPEAGTLVEDKPIQSWE-----AETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA 232 (337)
T ss_dssp EEETTTTEEEEEECSTTTT-----TTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE
T ss_pred EEECCCCcEeeeeeccccC-----CCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce
Confidence 9998754322111111000 001122222222111100 0111211110000
Q ss_pred eEE------EeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEECCCCCeEEEEeCCCCEEEeecC
Q 022074 209 LIR------CHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFP 282 (303)
Q Consensus 209 ~~~------~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~ 282 (303)
... ......++|++++++++ ++.|++||+.+++.+..+..+ ..+.+++|+|++++|++++.++.|.+||+.
T Consensus 233 ~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~ 309 (337)
T 1pby_B 233 MREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVWLGGALGDLAAYDAE 309 (337)
T ss_dssp EEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECTTSCEEEEESBSSEEEEEETT
T ss_pred EeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC-CceeeEEECCCCCEEEEEcCCCcEEEEECc
Confidence 000 11124688999998888 799999999999888777644 467899999999999889999999999986
Q ss_pred CC
Q 022074 283 GN 284 (303)
Q Consensus 283 ~~ 284 (303)
..
T Consensus 310 ~~ 311 (337)
T 1pby_B 310 TL 311 (337)
T ss_dssp TC
T ss_pred CC
Confidence 54
No 135
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.77 E-value=2.8e-17 Score=150.38 Aligned_cols=118 Identities=12% Similarity=0.059 Sum_probs=99.2
Q ss_pred CcccceEEEEEcCCCCEEE----EeeCCCeEEEEECCCC--------ce---EEEEecccCCeEEEEEccCCCcEEEEec
Q 022074 37 GYSFGIFSLKFSTDGRELV----AGSSDDCIYVYDLEAN--------KL---SLRILAHTSDVNTVCFGDESGHLIYSGS 101 (303)
Q Consensus 37 ~~~~~v~~l~~s~~g~~l~----sgs~Dg~v~lwd~~~~--------~~---~~~~~~h~~~v~~l~~~~~~~~~l~s~s 101 (303)
.|..+|.+++|+|+|++|+ +|+.|++|+|||+.++ +. ...+.+|...|.+++|+|..+++|++++
T Consensus 90 ~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s 169 (434)
T 2oit_A 90 PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL 169 (434)
T ss_dssp CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEE
T ss_pred cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEE
Confidence 3556799999999999999 7899999999998654 11 2334568999999999876688999999
Q ss_pred CCCeEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcc
Q 022074 102 DDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIR 158 (303)
Q Consensus 102 ~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~ 158 (303)
.||+|++||++.. .......+|...|.+++|+++|++|++|+.|++|++||++
T Consensus 170 ~Dg~v~iwD~~~~----~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 170 ADGSIAVLQVTET----VKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp TTSCEEEEEESSS----EEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred CCCeEEEEEcCCC----cceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence 9999999998632 2233455788999999999999999999999999999987
No 136
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.77 E-value=1.2e-16 Score=140.97 Aligned_cols=234 Identities=10% Similarity=0.059 Sum_probs=145.4
Q ss_pred hccccccccccCcCccccc-CCCcccceEEEEEcCCCCEEEEee-CCCeEEEEECCC-CceE--EEEec---------cc
Q 022074 16 ESLANVTEIHDGLDFSAAD-DGGYSFGIFSLKFSTDGRELVAGS-SDDCIYVYDLEA-NKLS--LRILA---------HT 81 (303)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~l~~s~~g~~l~sgs-~Dg~v~lwd~~~-~~~~--~~~~~---------h~ 81 (303)
+.-+.+|++-+|. ..... ..+|...+..++|+|+|++|++++ .+++|++|++.. +... ..+.. +.
T Consensus 62 ~~~v~~~~~~~g~-~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~ 140 (347)
T 3hfq_A 62 EGGIAAWQIDGQT-AHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDG 140 (347)
T ss_dssp EEEEEEEEEETTE-EEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSS
T ss_pred CceEEEEEecCCc-EEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccC
Confidence 3456677763332 21111 134566788999999999998888 689999999963 3322 22211 11
Q ss_pred CCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCccceeeccc-ccCeEEEEeCCCCCEEEE-EeCCCcEEEEEccc
Q 022074 82 SDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGH-LEGITFIDSRGDGRYLIS-NGKDQAIKLWDIRK 159 (303)
Q Consensus 82 ~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s-~~~D~~v~lWdl~~ 159 (303)
..+.+++|+|+ ++++++...++.|++||+.... .......+..+ ......++|+|+|++++. +..++.+++|++..
T Consensus 141 ~~~~~~~~spd-g~l~v~~~~~~~v~~~~~~~~g-~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~ 218 (347)
T 3hfq_A 141 SHIHYTDLTPD-NRLAVIDLGSDKVYVYNVSDAG-QLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDT 218 (347)
T ss_dssp CCEEEEEECTT-SCEEEEETTTTEEEEEEECTTS-CEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred CCceEEEECCC-CcEEEEeCCCCEEEEEEECCCC-cEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 24778999765 5577777788999999975110 00111112222 235778899999996554 66789999999863
Q ss_pred ccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEE-EEEeCCCeEEEEE
Q 022074 160 MSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYI-YTGSHDSCVYVYD 238 (303)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l-atg~~dg~i~iwd 238 (303)
....... .......+.. +.+. .......|+|++++| ++...++.|.+||
T Consensus 219 ~~g~~~~----------~~~~~~~~~~-------------~~~~-------~~~~~i~~spdG~~l~v~~~~~~~v~v~~ 268 (347)
T 3hfq_A 219 QTGAFTQ----------LGIVKTIPAD-------------YTAH-------NGAAAIRLSHDGHFLYVSNRGYNTLAVFA 268 (347)
T ss_dssp TTTEEEE----------EEEEESSCTT-------------CCSC-------CEEEEEEECTTSCEEEEEEETTTEEEEEE
T ss_pred CCCceEE----------eeeeeecCCC-------------CCCC-------CcceeEEECCCCCEEEEEeCCCCEEEEEE
Confidence 1110000 0000000000 0000 001234578999977 5556799999999
Q ss_pred CC---CCeEEEEeecCCCCeEEEEECCCCCeEEEEeCC-CCEEEeecC
Q 022074 239 LV---SGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWD-GDVVRWEFP 282 (303)
Q Consensus 239 ~~---~~~~~~~~~~h~~~I~~v~~sp~~~~las~s~D-g~i~~Wd~~ 282 (303)
+. +.+.+..+..+...+..++|+||+++|++++.+ +.+.+|++.
T Consensus 269 ~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 269 VTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp ECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred ECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 87 224566666677778999999999988887765 899999764
No 137
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.76 E-value=4.7e-17 Score=138.87 Aligned_cols=212 Identities=16% Similarity=0.149 Sum_probs=143.2
Q ss_pred hcccccccccc-CcCcccccCCCc-ccceEEEEEcCCCCEEEEeeC--CC--eEEEEECCCCceEEEEecccCCeEEEEE
Q 022074 16 ESLANVTEIHD-GLDFSAADDGGY-SFGIFSLKFSTDGRELVAGSS--DD--CIYVYDLEANKLSLRILAHTSDVNTVCF 89 (303)
Q Consensus 16 ~~~~~~~~~~~-~~~~~~~~~~~~-~~~v~~l~~s~~g~~l~sgs~--Dg--~v~lwd~~~~~~~~~~~~h~~~v~~l~~ 89 (303)
+..+.+|+.-+ |. ..... .+| ...+.+++|+|+|+++++++. ++ .|.++++.++.. ..+.. ...+..++|
T Consensus 61 ~~~i~~~d~~~~~~-~~~~~-~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~~~-~~~~~~~~~ 136 (297)
T 2ojh_A 61 EGLLYRLSLAGDPS-PEKVD-TGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTP-RLMTK-NLPSYWHGW 136 (297)
T ss_dssp TTEEEEEESSSCCS-CEECC-CTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCC-EECCS-SSSEEEEEE
T ss_pred CCeEEEEeCCCCCC-ceEec-cccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCce-EEeec-CCCccceEE
Confidence 34556676644 33 22222 344 477899999999999999983 34 445555555543 33333 345888999
Q ss_pred ccCCCcEEE-EecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEe-CCCcEEEEEcccccCCcccc
Q 022074 90 GDESGHLIY-SGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNG-KDQAIKLWDIRKMSSNASCN 167 (303)
Q Consensus 90 ~~~~~~~l~-s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~D~~v~lWdl~~~~~~~~~~ 167 (303)
+|+ ++.++ +++.++.+++|+++. .......+..|...+..+.++|++++|+.++ .|+.+++|+++....
T Consensus 137 spd-g~~l~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~----- 207 (297)
T 2ojh_A 137 SPD-GKSFTYCGIRDQVFDIYSMDI---DSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGS----- 207 (297)
T ss_dssp CTT-SSEEEEEEEETTEEEEEEEET---TTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS-----
T ss_pred CCC-CCEEEEEECCCCceEEEEEEC---CCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCC-----
Confidence 765 55554 888899999998642 1222345556778899999999999887666 599999998753110
Q ss_pred cCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCC-----------CeEEE
Q 022074 168 LGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHD-----------SCVYV 236 (303)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~d-----------g~i~i 236 (303)
....+..+. .....+.|+|++++|++++.+ +.|++
T Consensus 208 ----------------------------~~~~~~~~~------~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~ 253 (297)
T 2ojh_A 208 ----------------------------SVERITDSA------YGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQL 253 (297)
T ss_dssp ----------------------------CEEECCCCS------EEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEE
T ss_pred ----------------------------CcEEEecCC------cccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEE
Confidence 000111111 011234578899999888766 57999
Q ss_pred EECCCCeE--EEEeecCCCCeEEEEECCCCCeEEEEeCCC
Q 022074 237 YDLVSGEQ--VAALKYHTSPVRDCSWHPSQPMLVSSSWDG 274 (303)
Q Consensus 237 wd~~~~~~--~~~~~~h~~~I~~v~~sp~~~~las~s~Dg 274 (303)
||+.+++. +..+..|...+.+++|+|++++|++++.|.
T Consensus 254 ~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 254 MDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred EecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 99988764 445557888999999999999988887664
No 138
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.76 E-value=1.5e-16 Score=149.59 Aligned_cols=258 Identities=12% Similarity=0.075 Sum_probs=163.8
Q ss_pred hccccccccc--cCcCcccccCCCcccceEEEEEcC----CCCEEEEee-CCCeEEEEECCCCceEEEEec---------
Q 022074 16 ESLANVTEIH--DGLDFSAADDGGYSFGIFSLKFST----DGRELVAGS-SDDCIYVYDLEANKLSLRILA--------- 79 (303)
Q Consensus 16 ~~~~~~~~~~--~~~~~~~~~~~~~~~~v~~l~~s~----~g~~l~sgs-~Dg~v~lwd~~~~~~~~~~~~--------- 79 (303)
+..+.||+.+ +|. ...... +......++|+| ||+++++++ .+++|.+||..+++....+..
T Consensus 199 d~~V~v~D~~~~t~~-~~~~i~--~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~ 275 (543)
T 1nir_A 199 DARIDMIDLWAKEPT-KVAEIK--IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQT 275 (543)
T ss_dssp TSEEEEEETTSSSCE-EEEEEE--CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCC
T ss_pred CCeEEEEECcCCCCc-EEEEEe--cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccc
Confidence 3667788874 332 222222 234579999999 999999988 489999999999887766653
Q ss_pred -c-cCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEE-eCCCcEEEEE
Q 022074 80 -H-TSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISN-GKDQAIKLWD 156 (303)
Q Consensus 80 -h-~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~D~~v~lWd 156 (303)
| ...+..+.++++.+.++++...+++|.+||...... .....+ .+...+..+.|+|++++|+++ ..+++|.+||
T Consensus 276 ~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~--l~~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D 352 (543)
T 1nir_A 276 YHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDN--LTVTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVID 352 (543)
T ss_dssp EESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSS--CEEEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEE
T ss_pred cccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCc--ceeEEe-ccCcCccCceECCCCCEEEEEecCCCeEEEEE
Confidence 2 236888999877777888889999999999763211 111122 345567788899999987655 4689999999
Q ss_pred cccccCCcccccC---c--cceeeeceeeeCCCCCccccCC--CCCcceEEeccc--------ceeeeEEE----eeeee
Q 022074 157 IRKMSSNASCNLG---F--RSYEWDYRWMDYPPQARDLKHP--CDQSVATYKGHS--------VLRTLIRC----HFSPV 217 (303)
Q Consensus 157 l~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--------~~~~~~~~----~~~~~ 217 (303)
+...+.......+ . +...+ ..+.....+... .+..+..++-.. .....+.. .....
T Consensus 353 ~~tg~l~~~i~~g~~ph~g~g~~~-----~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~ 427 (543)
T 1nir_A 353 SKDRRLSALVDVGKTPHPGRGANF-----VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIK 427 (543)
T ss_dssp TTTTEEEEEEECSSSBCCTTCEEE-----EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEE
T ss_pred CCCCeEEEeeccCCCCCCCCCccc-----CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEE
Confidence 9765433222211 0 11111 001001111110 111222221111 00001111 12234
Q ss_pred eeCCCeEEEEEe-------CCCeEEEEECCCCeEE-EEe--------ecCCCCeEEEEECCCCCeEEEEe-----CCCCE
Q 022074 218 YSTGQKYIYTGS-------HDSCVYVYDLVSGEQV-AAL--------KYHTSPVRDCSWHPSQPMLVSSS-----WDGDV 276 (303)
Q Consensus 218 ~s~~~~~latg~-------~dg~i~iwd~~~~~~~-~~~--------~~h~~~I~~v~~sp~~~~las~s-----~Dg~i 276 (303)
++|++++|++++ .+++|.+||+.+++.. ..+ ..+...+..++|+|+|+.|..+. .|++|
T Consensus 428 ~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i 507 (543)
T 1nir_A 428 THPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSAL 507 (543)
T ss_dssp CCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEE
T ss_pred cCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeE
Confidence 789999999987 3789999999998866 443 35677899999999999877653 47999
Q ss_pred EEeecCCC
Q 022074 277 VRWEFPGN 284 (303)
Q Consensus 277 ~~Wd~~~~ 284 (303)
.+||.+..
T Consensus 508 ~v~D~~t~ 515 (543)
T 1nir_A 508 VVVDDKTL 515 (543)
T ss_dssp EEEETTTT
T ss_pred EEEECCCc
Confidence 99997653
No 139
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.75 E-value=4e-17 Score=154.38 Aligned_cols=195 Identities=11% Similarity=0.122 Sum_probs=133.8
Q ss_pred ccceEEEEEcCCCCEEEEeeC-CCeEEEEECCCCceEEEEeccc-CCeEEEEEccCCCcEEEEecC---CCeEEEEcCcc
Q 022074 39 SFGIFSLKFSTDGRELVAGSS-DDCIYVYDLEANKLSLRILAHT-SDVNTVCFGDESGHLIYSGSD---DNLCKVWDRRC 113 (303)
Q Consensus 39 ~~~v~~l~~s~~g~~l~sgs~-Dg~v~lwd~~~~~~~~~~~~h~-~~v~~l~~~~~~~~~l~s~s~---dg~v~lWd~~~ 113 (303)
..+|++++|+|||++|+.++. ||+++||+++++.. .++..|. ..+..++|+|+ +++++++. +...++|....
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~-~~lt~~~~~~~~~~~~spd--~~l~~~~~~~g~~~~~l~~~~~ 97 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGET-VKLNREPINSVLDPHYGVG--RVILVRDVSKGAEQHALFKVNT 97 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEE-EECCSSCCSEECEECTTCS--EEEEEEECSTTSCCEEEEEEET
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCc-EeeecccccccccccCCCC--eEEEEeccCCCCcceEEEEEec
Confidence 457999999999999999887 99999999966654 4555555 58899999854 67777765 55667765432
Q ss_pred ccCCCccceeecccccCeEEEEeCCCCC--EEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccC
Q 022074 114 LNVKGKPAGVLMGHLEGITFIDSRGDGR--YLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKH 191 (303)
Q Consensus 114 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~--~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (303)
.. .+... .+... ......+++++++ .+++++. +.+.+||+.....
T Consensus 98 ~~-~g~~~-~l~~~-~~~~~~~~s~dg~~~~~~s~~~-~~~~l~d~~~g~~----------------------------- 144 (582)
T 3o4h_A 98 SR-PGEEQ-RLEAV-KPMRILSGVDTGEAVVFTGATE-DRVALYALDGGGL----------------------------- 144 (582)
T ss_dssp TS-TTCCE-ECTTS-CSBEEEEEEECSSCEEEEEECS-SCEEEEEEETTEE-----------------------------
T ss_pred cC-CCccc-cccCC-CCceeeeeCCCCCeEEEEecCC-CCceEEEccCCcE-----------------------------
Confidence 00 11111 22111 1223445566653 4455544 4455999753210
Q ss_pred CCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCC----CeEEEEECCCCeEEEEeecCCCCeEEEEECCCCCeE
Q 022074 192 PCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHD----SCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPML 267 (303)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~d----g~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~~l 267 (303)
..+..+.. ..+.+||||+++++++.+ +.|++||+.+++.. .+..|...+.+++|||||++|
T Consensus 145 ------~~l~~~~~--------~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l 209 (582)
T 3o4h_A 145 ------RELARLPG--------FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVT 209 (582)
T ss_dssp ------EEEEEESS--------CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEE
T ss_pred ------EEeecCCC--------ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEE
Confidence 00000000 345678899999988877 88999999888754 667888899999999999999
Q ss_pred EEEeCCC--CEEEeecCCC
Q 022074 268 VSSSWDG--DVVRWEFPGN 284 (303)
Q Consensus 268 as~s~Dg--~i~~Wd~~~~ 284 (303)
++++.++ .|++||+.+.
T Consensus 210 ~~~~~~~~~~i~~~d~~~~ 228 (582)
T 3o4h_A 210 AGLETAREARLVTVDPRDG 228 (582)
T ss_dssp EEEECSSCEEEEEECTTTC
T ss_pred EEccCCCeeEEEEEcCCCC
Confidence 9888898 8999998764
No 140
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.75 E-value=4.4e-16 Score=136.14 Aligned_cols=225 Identities=8% Similarity=0.004 Sum_probs=148.3
Q ss_pred hhhccccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEeeC-CCeEEEEECCCCce-EEEEecccCCeEEEEEcc
Q 022074 14 TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS-DDCIYVYDLEANKL-SLRILAHTSDVNTVCFGD 91 (303)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~-Dg~v~lwd~~~~~~-~~~~~~h~~~v~~l~~~~ 91 (303)
+.+..+.||+.-+|... .....+ ..+. +++|+|+|+++++++. ++.|++||+.+++. ...+..+.....+++|++
T Consensus 17 ~~~~~v~~~d~~~~~~~-~~~~~~-~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~ 93 (331)
T 3u4y_A 17 QHLRRISFFSTDTLEIL-NQITLG-YDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITP 93 (331)
T ss_dssp GGGTEEEEEETTTCCEE-EEEECC-CCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECT
T ss_pred cCCCeEEEEeCccccee-eeEEcc-CCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECC
Confidence 44567778877665432 222233 3445 9999999997777665 88999999999887 555555655555599975
Q ss_pred CCCcEEEEecCCC---eEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEE-EEEeCCCc-EEEEEcccccCCccc
Q 022074 92 ESGHLIYSGSDDN---LCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYL-ISNGKDQA-IKLWDIRKMSSNASC 166 (303)
Q Consensus 92 ~~~~~l~s~s~dg---~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~D~~-v~lWdl~~~~~~~~~ 166 (303)
++++++++..++ .|++||+.. .+....+. +......+.++|+|+++ ++...++. +.+|++........
T Consensus 94 -dg~~l~~~~~~~~~~~i~v~d~~~----~~~~~~~~-~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~- 166 (331)
T 3u4y_A 94 -DDQFAVTVTGLNHPFNMQSYSFLK----NKFISTIP-IPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFD- 166 (331)
T ss_dssp -TSSEEEECCCSSSSCEEEEEETTT----TEEEEEEE-CCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEE-
T ss_pred -CCCEEEEecCCCCcccEEEEECCC----CCeEEEEE-CCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEee-
Confidence 577777655553 999999752 23333332 23456889999999855 45556688 99999863211000
Q ss_pred ccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEE-EEeCCCeEEEEECCCCeE-
Q 022074 167 NLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIY-TGSHDSCVYVYDLVSGEQ- 244 (303)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la-tg~~dg~i~iwd~~~~~~- 244 (303)
.. . ........ .....++|++++++ ++..++.|++||+.+++.
T Consensus 167 --------~~-~-------------------~~~~~~~~-------~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~ 211 (331)
T 3u4y_A 167 --------TG-Q-------------------EFISGGTR-------PFNITFTPDGNFAFVANLIGNSIGILETQNPENI 211 (331)
T ss_dssp --------EE-E-------------------EEECSSSS-------EEEEEECTTSSEEEEEETTTTEEEEEECSSTTSC
T ss_pred --------cC-C-------------------ccccCCCC-------ccceEECCCCCEEEEEeCCCCeEEEEECCCCccc
Confidence 00 0 00000000 01234788998554 455789999999998887
Q ss_pred --EEEeecCCCCeEEEEECCCCCeEE-EEeCCCCEEEeecCCC
Q 022074 245 --VAALKYHTSPVRDCSWHPSQPMLV-SSSWDGDVVRWEFPGN 284 (303)
Q Consensus 245 --~~~~~~h~~~I~~v~~sp~~~~la-s~s~Dg~i~~Wd~~~~ 284 (303)
+..+..+ ..+..++|+||+++|+ +...++.+.+||....
T Consensus 212 ~~~~~~~~~-~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~ 253 (331)
T 3u4y_A 212 TLLNAVGTN-NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSG 253 (331)
T ss_dssp EEEEEEECS-SCCCCEEECTTSSEEEEECSSEEEEEEEETTTT
T ss_pred ceeeeccCC-CCCceEEECCCCCEEEEEEcCCCEEEEEECCCC
Confidence 7777644 5678999999999655 4456788999998754
No 141
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.73 E-value=1.7e-15 Score=133.15 Aligned_cols=202 Identities=12% Similarity=0.120 Sum_probs=143.2
Q ss_pred cccceEEEEEcCCCCEEEEeeC-------CCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEc
Q 022074 38 YSFGIFSLKFSTDGRELVAGSS-------DDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWD 110 (303)
Q Consensus 38 ~~~~v~~l~~s~~g~~l~sgs~-------Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd 110 (303)
...++..++|+|+|+++++++. ++.|.+||..+++....+.. ...+..++|+++...++++...++.|.+||
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d 117 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAID 117 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEe
Confidence 3456889999999999888874 56899999999987665543 345778899765444666777789999999
Q ss_pred CccccCCCccceeeccccc---------CeEEEEeCCCCCEEEEEe--CCCcEEEEEcccccCCcccccCccceeeecee
Q 022074 111 RRCLNVKGKPAGVLMGHLE---------GITFIDSRGDGRYLISNG--KDQAIKLWDIRKMSSNASCNLGFRSYEWDYRW 179 (303)
Q Consensus 111 ~~~~~~~~~~~~~~~~h~~---------~v~~~~~~~~~~~l~s~~--~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~ 179 (303)
... ++....+..+.. ....+.+++++++++.++ .++.|.+||+........
T Consensus 118 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~-------------- 179 (353)
T 3vgz_A 118 AKT----GEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTA-------------- 179 (353)
T ss_dssp TTT----CCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEE--------------
T ss_pred CCC----CeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEE--------------
Confidence 753 233333332221 267789999999877665 488999999864321100
Q ss_pred eeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEeec----CCCCe
Q 022074 180 MDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKY----HTSPV 255 (303)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~----h~~~I 255 (303)
+..... ......++++++++++++.++.|.+||..+++.+..+.. +...+
T Consensus 180 --------------------~~~~~~------~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 233 (353)
T 3vgz_A 180 --------------------IQNTGK------MSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFF 233 (353)
T ss_dssp --------------------ECCCCT------TCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCE
T ss_pred --------------------ecCCCC------ccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCccc
Confidence 000000 001234678999999999999999999999998877654 55678
Q ss_pred EEEEECCCCCeEEEEeC-CCCEEEeecCCC
Q 022074 256 RDCSWHPSQPMLVSSSW-DGDVVRWEFPGN 284 (303)
Q Consensus 256 ~~v~~sp~~~~las~s~-Dg~i~~Wd~~~~ 284 (303)
..++|+|++++|+.++. ++.+.+||....
T Consensus 234 ~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~ 263 (353)
T 3vgz_A 234 INISLDTARQRAFITDSKAAEVLVVDTRNG 263 (353)
T ss_dssp EEEEEETTTTEEEEEESSSSEEEEEETTTC
T ss_pred ceEEECCCCCEEEEEeCCCCEEEEEECCCC
Confidence 89999999997666554 599999998643
No 142
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.73 E-value=3.4e-17 Score=158.34 Aligned_cols=214 Identities=10% Similarity=0.017 Sum_probs=142.6
Q ss_pred ceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccC---CeEEEEEccCCCcEEEEecCC---------CeEEE
Q 022074 41 GIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTS---DVNTVCFGDESGHLIYSGSDD---------NLCKV 108 (303)
Q Consensus 41 ~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~---~v~~l~~~~~~~~~l~s~s~d---------g~v~l 108 (303)
.+.+++|+|||+++++ +.||+|++||+.+++....+..|.. .|..++|+| +++.|++++.+ +.+++
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~Sp-Dg~~l~~~~~~~~~~~~~~~~~i~~ 95 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISP-DREYALFSYNVEPIYQHSYTGYYVL 95 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECT-TSSEEEEEESCCCCSSSCCCSEEEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECC-CCCEEEEEecCccceeecceeeEEE
Confidence 4678899999997766 7899999999999987666655654 489999976 57888888664 78889
Q ss_pred EcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCcc
Q 022074 109 WDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARD 188 (303)
Q Consensus 109 Wd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (303)
||+..... .......+|...+..++|+|+|++|+.++. +.|++||+...........+..
T Consensus 96 ~d~~~~~~--~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~----------------- 155 (723)
T 1xfd_A 96 SKIPHGDP--QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKE----------------- 155 (723)
T ss_dssp EESSSCCC--EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBT-----------------
T ss_pred EECCCCce--EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCC-----------------
Confidence 99863221 122223345555888899999999999886 7999999864321110000000
Q ss_pred ccCCCCCcceEEecccce---eeeEEEeeeeeeeCCCeEEEEEeCCC---------------------------------
Q 022074 189 LKHPCDQSVATYKGHSVL---RTLIRCHFSPVYSTGQKYIYTGSHDS--------------------------------- 232 (303)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~s~~~~~latg~~dg--------------------------------- 232 (303)
.+ .+.|.... +........+.|||||++|++++.|+
T Consensus 156 -------~~-~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 227 (723)
T 1xfd_A 156 -------GV-IYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPS 227 (723)
T ss_dssp -------TT-EEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCE
T ss_pred -------Cc-eECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCe
Confidence 00 00000000 00000012345778888888776543
Q ss_pred -eEEEEECCCCeEEEEeecC------CCCeEEEEECCCCCeEEEEeC----CCCEEEeecCCC
Q 022074 233 -CVYVYDLVSGEQVAALKYH------TSPVRDCSWHPSQPMLVSSSW----DGDVVRWEFPGN 284 (303)
Q Consensus 233 -~i~iwd~~~~~~~~~~~~h------~~~I~~v~~sp~~~~las~s~----Dg~i~~Wd~~~~ 284 (303)
.|++||+.+++....+..+ ...+.+++|||||++|++.+. +..|++||+.+.
T Consensus 228 ~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g 290 (723)
T 1xfd_A 228 ISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTG 290 (723)
T ss_dssp EEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTC
T ss_pred eEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCC
Confidence 8999999988765556544 568999999999998877653 357999998654
No 143
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.73 E-value=4e-16 Score=136.92 Aligned_cols=228 Identities=8% Similarity=-0.019 Sum_probs=143.2
Q ss_pred EEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEeccc-CCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCcccee
Q 022074 45 LKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHT-SDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGV 123 (303)
Q Consensus 45 l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~-~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~ 123 (303)
++++++++.+++++.+++|++||+.+++....+..+. ..+..++|+++...++++...++.|.+||+.. ++....
T Consensus 5 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t----~~~~~~ 80 (349)
T 1jmx_B 5 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDT----CKNTFH 80 (349)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTT----TEEEEE
T ss_pred ccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCC----CcEEEE
Confidence 4577888899999999999999999998766655443 25778899765333556777899999999752 222322
Q ss_pred ec-cc-----ccCeEEEEeCCCCCEEEEEeCC------------CcEEEEEcccccCCc---ccccCccceeeeceeeeC
Q 022074 124 LM-GH-----LEGITFIDSRGDGRYLISNGKD------------QAIKLWDIRKMSSNA---SCNLGFRSYEWDYRWMDY 182 (303)
Q Consensus 124 ~~-~h-----~~~v~~~~~~~~~~~l~s~~~D------------~~v~lWdl~~~~~~~---~~~~~~~~~~~~~~~~~~ 182 (303)
+. .+ ...+..+.++|+|+++++++.+ +.|.+||+....... ...... ....+.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-----~~~~~~~ 155 (349)
T 1jmx_B 81 ANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPR-----QVYLMRA 155 (349)
T ss_dssp EESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCS-----SCCCEEE
T ss_pred EEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCC-----cccceeE
Confidence 22 22 2336788899999999988865 999999987522111 000000 0011112
Q ss_pred CCCCccccC---------CCCCcceEEeccc-------------------------c-----------------------
Q 022074 183 PPQARDLKH---------PCDQSVATYKGHS-------------------------V----------------------- 205 (303)
Q Consensus 183 ~~~~~~~~~---------~~~~~~~~~~~~~-------------------------~----------------------- 205 (303)
.++.+.+.. .....+..+.... .
T Consensus 156 s~dg~l~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 235 (349)
T 1jmx_B 156 ADDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGY 235 (349)
T ss_dssp CTTSCEEEESSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEE
T ss_pred CCCCcEEEccCcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeE
Confidence 222110000 0000000000000 0
Q ss_pred --------eeeeEE------EeeeeeeeC-CCeEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEECCCCCeEEEE
Q 022074 206 --------LRTLIR------CHFSPVYST-GQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSS 270 (303)
Q Consensus 206 --------~~~~~~------~~~~~~~s~-~~~~latg~~dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~~las~ 270 (303)
...... ......++| ++++++++ ++.|++||+.+++.+..+... ..+.+++|+|++++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~ 312 (349)
T 1jmx_B 236 LSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLD-HTYYCVAFDKKGDKLYLG 312 (349)
T ss_dssp EEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECSSSSCEEEE
T ss_pred EEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCC-CCccceEECCCCCEEEEe
Confidence 000000 112234678 99988888 889999999999988777643 457899999999988888
Q ss_pred eCCCCEEEeecCCC
Q 022074 271 SWDGDVVRWEFPGN 284 (303)
Q Consensus 271 s~Dg~i~~Wd~~~~ 284 (303)
+.++.|.+||....
T Consensus 313 ~~~~~v~v~d~~~~ 326 (349)
T 1jmx_B 313 GTFNDLAVFNPDTL 326 (349)
T ss_dssp SBSSEEEEEETTTT
T ss_pred cCCCeEEEEecccc
Confidence 89999999998643
No 144
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.72 E-value=3.5e-16 Score=151.74 Aligned_cols=233 Identities=13% Similarity=0.102 Sum_probs=149.6
Q ss_pred cceEEEEEcCCCCEEEEeeCCCeEEEEECCCCc--eEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCC
Q 022074 40 FGIFSLKFSTDGRELVAGSSDDCIYVYDLEANK--LSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVK 117 (303)
Q Consensus 40 ~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~--~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~ 117 (303)
..|.+++|||||++|++++. ++|++||+.++. ....+..|...+..++|+| +++.|+.++ ++.|++||+...
T Consensus 109 ~~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SP-DG~~la~~~-~~~i~~~d~~~g--- 182 (741)
T 2ecf_A 109 TGIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSP-KGGFVSFIR-GRNLWVIDLASG--- 182 (741)
T ss_dssp EESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECT-TSSEEEEEE-TTEEEEEETTTT---
T ss_pred cCcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCC-CCCEEEEEe-CCcEEEEecCCC---
Confidence 34889999999999999886 899999999882 2345667888899999976 578888777 469999997532
Q ss_pred Cccceeeccccc----------------CeEEEEeCCCCCEEEEEeCCC-------------------------------
Q 022074 118 GKPAGVLMGHLE----------------GITFIDSRGDGRYLISNGKDQ------------------------------- 150 (303)
Q Consensus 118 ~~~~~~~~~h~~----------------~v~~~~~~~~~~~l~s~~~D~------------------------------- 150 (303)
........+.. .+..+.|+|||++|++++.|+
T Consensus 183 -~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~ 261 (741)
T 2ecf_A 183 -RQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANV 261 (741)
T ss_dssp -EEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCC
T ss_pred -CEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCC
Confidence 22222222222 146788999999999988776
Q ss_pred --cEEEEEccc-ccCCcccccCccceeeeceeeeCCCCCccccCCC------CCcceEEecccc-eeeeEEE--------
Q 022074 151 --AIKLWDIRK-MSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPC------DQSVATYKGHSV-LRTLIRC-------- 212 (303)
Q Consensus 151 --~v~lWdl~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~-~~~~~~~-------- 212 (303)
.|.+||+.. ....... .. ......+....+ ++.+.+.... ...+..++-... ...+...
T Consensus 262 ~~~l~~~d~~~~~~~~~~~-~~-~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~ 338 (741)
T 2ecf_A 262 QVKLGVISPAEQAQTQWID-LG-KEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPL 338 (741)
T ss_dssp EEEEEEECSSTTCCCEEEC-CC-SCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCC
T ss_pred eeEEEEEECCCCCceEEec-CC-CCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCc
Confidence 788888765 3321110 00 001111222334 4444332111 111222221110 1111111
Q ss_pred eeeeeeeCCCeEEEEEeCCCeEEEEECC-CCeEEEEeecCCCCeEEE-EECCCCCeE-EEEeCCC--CEEEeecCC
Q 022074 213 HFSPVYSTGQKYIYTGSHDSCVYVYDLV-SGEQVAALKYHTSPVRDC-SWHPSQPML-VSSSWDG--DVVRWEFPG 283 (303)
Q Consensus 213 ~~~~~~s~~~~~latg~~dg~i~iwd~~-~~~~~~~~~~h~~~I~~v-~~sp~~~~l-as~s~Dg--~i~~Wd~~~ 283 (303)
...+.|+||++++++++.||.++||.+. +++ ...+..|...+.++ .|||+++.| ++++.|+ .+++|++..
T Consensus 339 ~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 339 HNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPL 413 (741)
T ss_dssp CSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEET
T ss_pred CCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEc
Confidence 1256789999999999999988887765 445 67777888889888 599999866 4555565 899999753
No 145
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.72 E-value=1.4e-15 Score=132.95 Aligned_cols=227 Identities=12% Similarity=0.081 Sum_probs=141.1
Q ss_pred cccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEeeCCC---eEEEEECCCCceEEEEecccCCeEEEEEccCCC
Q 022074 18 LANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDD---CIYVYDLEANKLSLRILAHTSDVNTVCFGDESG 94 (303)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg---~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~ 94 (303)
.+.+++.-+|.-.. .....+..+..+++|+|+|++++++..++ .|++||+.+++....+. +......++|+|+..
T Consensus 63 ~i~~~d~~~~~~~~-~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~spdg~ 140 (331)
T 3u4y_A 63 TLVQIETQLEPPKV-VAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIP-IPYDAVGIAISPNGN 140 (331)
T ss_dssp EEEEEECSSSSCEE-EEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEE-CCTTEEEEEECTTSS
T ss_pred eEEEEECCCCceeE-EecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEE-CCCCccceEECCCCC
Confidence 34555554443201 11133445555599999999999666553 89999999988765544 345678999976543
Q ss_pred cEEEEecCCCe-EEEEcCccccCCCccceeecccccCeEEEEeCCCCCEE-EEEeCCCcEEEEEcccccCCcccccCccc
Q 022074 95 HLIYSGSDDNL-CKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYL-ISNGKDQAIKLWDIRKMSSNASCNLGFRS 172 (303)
Q Consensus 95 ~~l~s~s~dg~-v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~D~~v~lWdl~~~~~~~~~~~~~~~ 172 (303)
.++++...++. |.+|++......................+.++|+|+++ +++..++.|++||+.......
T Consensus 141 ~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~-------- 212 (331)
T 3u4y_A 141 GLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENIT-------- 212 (331)
T ss_dssp CEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCE--------
T ss_pred EEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccc--------
Confidence 45666666678 99999752110000001111234457889999999865 555578999999986432100
Q ss_pred eeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEe-CCCeEEEEECCCCeE--EEEee
Q 022074 173 YEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGS-HDSCVYVYDLVSGEQ--VAALK 249 (303)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~-~dg~i~iwd~~~~~~--~~~~~ 249 (303)
.+..+..... .....|+|++++++.++ .++.|.+||..+++. +..+.
T Consensus 213 -----------------------~~~~~~~~~~-------~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~ 262 (331)
T 3u4y_A 213 -----------------------LLNAVGTNNL-------PGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFG 262 (331)
T ss_dssp -----------------------EEEEEECSSC-------CCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEE
T ss_pred -----------------------eeeeccCCCC-------CceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccc
Confidence 0001110000 01234788999766554 688899999999876 44443
Q ss_pred cC----CCC---eEEEEECCCCCeEEEE-eCCCCEEEeecCCC
Q 022074 250 YH----TSP---VRDCSWHPSQPMLVSS-SWDGDVVRWEFPGN 284 (303)
Q Consensus 250 ~h----~~~---I~~v~~sp~~~~las~-s~Dg~i~~Wd~~~~ 284 (303)
.+ ..+ ...++|+||+++|+.+ ..++.+.+||+...
T Consensus 263 ~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~ 305 (331)
T 3u4y_A 263 HGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGK 305 (331)
T ss_dssp CCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSC
T ss_pred cccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCC
Confidence 22 222 3568999999987554 45679999998754
No 146
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.71 E-value=8.3e-16 Score=148.62 Aligned_cols=248 Identities=9% Similarity=0.001 Sum_probs=148.3
Q ss_pred hhccccccccccCcCcccccCCCccc---ceEEEEEcCCCCEEEEeeCC---------CeEEEEECCCCceEEEEe---c
Q 022074 15 MESLANVTEIHDGLDFSAADDGGYSF---GIFSLKFSTDGRELVAGSSD---------DCIYVYDLEANKLSLRIL---A 79 (303)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~l~~s~~g~~l~sgs~D---------g~v~lwd~~~~~~~~~~~---~ 79 (303)
.|..+.+|+.-+|.... ...+|.. .|.+++|||||++|++++.+ +.+++||+.+++. ..+. .
T Consensus 35 ~dg~i~~~d~~~g~~~~--~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~ 111 (723)
T 1xfd_A 35 QKGTVRLWNVETNTSTV--LIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEV 111 (723)
T ss_dssp SSSCEEEBCGGGCCCEE--EECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTC
T ss_pred CCCCEEEEECCCCcEEE--EeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCcc
Confidence 45567778876665332 2244554 59999999999999999874 7888999999875 2333 2
Q ss_pred ccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCccceeecccccC------------------eEEEEeCCCCC
Q 022074 80 HTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEG------------------ITFIDSRGDGR 141 (303)
Q Consensus 80 h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~------------------v~~~~~~~~~~ 141 (303)
|...+..++|+| +++.|+.++. +.|++||+... ........+... +..+.|+|||+
T Consensus 112 ~~~~~~~~~~SP-dG~~la~~~~-~~i~~~~~~~g----~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~ 185 (723)
T 1xfd_A 112 SNAKLQYAGWGP-KGQQLIFIFE-NNIYYCAHVGK----QAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGT 185 (723)
T ss_dssp CSCCCSBCCBCS-STTCEEEEET-TEEEEESSSSS----CCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSS
T ss_pred ccccccccEECC-CCCEEEEEEC-CeEEEEECCCC----ceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCC
Confidence 344588899976 4777877775 79999997532 222233333322 37899999999
Q ss_pred EEEEEeCC-CcEEEEEcccccCCcccccCccceeeeceeeeCCCCCcc-----c--c-CCCCCcceEEecccceeeeEEE
Q 022074 142 YLISNGKD-QAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARD-----L--K-HPCDQSVATYKGHSVLRTLIRC 212 (303)
Q Consensus 142 ~l~s~~~D-~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~--~-~~~~~~~~~~~~~~~~~~~~~~ 212 (303)
+|++++.| +.+++|++....... .. ......+++.... + . .........+..+.........
T Consensus 186 ~la~~~~~~~~~~~~~~~~~~~~~-----~~----~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~ 256 (723)
T 1xfd_A 186 RLAYAAINDSRVPIMELPTYTGSI-----YP----TVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYY 256 (723)
T ss_dssp EEEEEEEECTTSCEEEECCCSSSS-----SC----CCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEE
T ss_pred EEEEEEECCCccceEEeeccCCcC-----CC----cceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccce
Confidence 99888754 578888764321110 00 0111222221110 0 0 0000000111110000000011
Q ss_pred eeeeeeeCCCeEEEEEeC----CCeEEEEECCCCeEEEEeec-CCCCeE----EEEECCCCCeEEE--EeCCC------C
Q 022074 213 HFSPVYSTGQKYIYTGSH----DSCVYVYDLVSGEQVAALKY-HTSPVR----DCSWHPSQPMLVS--SSWDG------D 275 (303)
Q Consensus 213 ~~~~~~s~~~~~latg~~----dg~i~iwd~~~~~~~~~~~~-h~~~I~----~v~~sp~~~~las--~s~Dg------~ 275 (303)
...+.||||++++++... +..|++||+.+++....+.. |...+. .++|||||+.|+. +..|+ .
T Consensus 257 ~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~ 336 (723)
T 1xfd_A 257 ITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYH 336 (723)
T ss_dssp EEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEE
T ss_pred eEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeE
Confidence 234668999998877653 46899999999887655543 445544 8899999997764 45666 4
Q ss_pred EEEee
Q 022074 276 VVRWE 280 (303)
Q Consensus 276 i~~Wd 280 (303)
|.+||
T Consensus 337 l~~~d 341 (723)
T 1xfd_A 337 ITVSS 341 (723)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 66677
No 147
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.70 E-value=4e-15 Score=130.79 Aligned_cols=201 Identities=13% Similarity=0.131 Sum_probs=138.3
Q ss_pred ceEEEEEcCCCCEEEEe-eCCCeEEEEECCCCceEEEEecccCC---------eEEEEEccCCCcEEEEec--CCCeEEE
Q 022074 41 GIFSLKFSTDGRELVAG-SSDDCIYVYDLEANKLSLRILAHTSD---------VNTVCFGDESGHLIYSGS--DDNLCKV 108 (303)
Q Consensus 41 ~v~~l~~s~~g~~l~sg-s~Dg~v~lwd~~~~~~~~~~~~h~~~---------v~~l~~~~~~~~~l~s~s--~dg~v~l 108 (303)
.+.+++|+++|++++++ ..++.|.+||+.+++....+..+... +..++|+++ ++.++.++ .++.|.+
T Consensus 90 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d-g~~l~~~~~~~~~~i~~ 168 (353)
T 3vgz_A 90 KPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDA-TNTVYISGIGKESVIWV 168 (353)
T ss_dssp CCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETT-TTEEEEEEESSSCEEEE
T ss_pred CcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCC-CCEEEEEecCCCceEEE
Confidence 36789999999966554 55799999999999877666554322 678999765 55554443 5889999
Q ss_pred EcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCcc
Q 022074 109 WDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARD 188 (303)
Q Consensus 109 Wd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (303)
||.. ..+....+..+...+..+.++++++++++++.++.+.+||+......... .....
T Consensus 169 ~d~~----~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~--------------~~~~~--- 227 (353)
T 3vgz_A 169 VDGG----NIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRK--------------KLLDD--- 227 (353)
T ss_dssp EETT----TTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEE--------------ECCCS---
T ss_pred EcCC----CCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEE--------------EcCCC---
Confidence 9975 23334444434555777889999999999999999999998643211000 00000
Q ss_pred ccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEe-CCCeEEEEECCCCeEEEEeecCCCCeEEEEECCCCCeE
Q 022074 189 LKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGS-HDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPML 267 (303)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~-~dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~~l 267 (303)
+... ......++|++++++.++ .++.|++||..+++.+..+.... ...++|+|+++++
T Consensus 228 -------------~~~~------~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~s~dg~~l 286 (353)
T 3vgz_A 228 -------------GKEH------FFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE--SLAVLFNPARNEA 286 (353)
T ss_dssp -------------SSCC------CEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS--CCCEEEETTTTEE
T ss_pred -------------CCCc------ccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC--CceEEECCCCCEE
Confidence 0000 001234678888766665 45999999999999887776544 2679999999954
Q ss_pred -EEEeCCCCEEEeecCCC
Q 022074 268 -VSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 268 -as~s~Dg~i~~Wd~~~~ 284 (303)
++...++.+.+||....
T Consensus 287 ~v~~~~~~~v~~~d~~~~ 304 (353)
T 3vgz_A 287 YVTHRQAGKVSVIDAKSY 304 (353)
T ss_dssp EEEETTTTEEEEEETTTT
T ss_pred EEEECCCCeEEEEECCCC
Confidence 55557999999997643
No 148
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.70 E-value=5.8e-15 Score=148.86 Aligned_cols=226 Identities=11% Similarity=0.015 Sum_probs=153.8
Q ss_pred CCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCC----------Ce
Q 022074 36 GGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDD----------NL 105 (303)
Q Consensus 36 ~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~d----------g~ 105 (303)
.+|...+.+++|+|||++|++++.++.|++||+.+++.......|...+..++|+| ++++|++++.+ +.
T Consensus 375 ~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~Sp-DG~~la~~~~~~~~~~~~~~~~~ 453 (1045)
T 1k32_A 375 EENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISD-NSRFIAYGFPLKHGETDGYVMQA 453 (1045)
T ss_dssp CCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECT-TSCEEEEEEEECSSTTCSCCEEE
T ss_pred cCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECC-CCCeEEEEecCccccccCCCCCe
Confidence 37888999999999999999999999999999999987766668888899999976 57788777654 49
Q ss_pred EEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCC
Q 022074 106 CKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQ 185 (303)
Q Consensus 106 v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (303)
|++||+.. ++ ...+..|...+..+.|+++|++|+.++.++..++|+......... ..... + .+.+.+.
T Consensus 454 i~l~d~~~----g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~--~~~~~--~---~~~~~~~ 521 (1045)
T 1k32_A 454 IHVYDMEG----RK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFE--VVSKP--F---VIPLIPG 521 (1045)
T ss_dssp EEEEETTT----TE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECC--SCBEE--E---EEESSTT
T ss_pred EEEEECCC----Cc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccc--cCcee--E---EEEeCCC
Confidence 99999752 22 445667878888899999999999999999999998653211000 00000 0 0011111
Q ss_pred Cccc---------------cCCC-CCcceEEecccceeeeEEEeeeeeeeCCCeEEEE-------------EeCCCeEEE
Q 022074 186 ARDL---------------KHPC-DQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYT-------------GSHDSCVYV 236 (303)
Q Consensus 186 ~~~~---------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~lat-------------g~~dg~i~i 236 (303)
.... .... ...+..+..+. .......++++++++++ ......|++
T Consensus 522 ~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~------~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~ 595 (1045)
T 1k32_A 522 SPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDP------GDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLK 595 (1045)
T ss_dssp CCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCC------BCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEE
T ss_pred CCCccccCcCccccccccccccCHhHceEEcCCCC------CChhheEEcCCCeEEEEecccCcccccccccCCCceEEE
Confidence 0000 0000 00111111111 01123346788887775 223568999
Q ss_pred EECCCCeEEEEeecCCCCeEEEEECCCCCeEEEEeCCCCEEEeecCCCC
Q 022074 237 YDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPGNG 285 (303)
Q Consensus 237 wd~~~~~~~~~~~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~~~ 285 (303)
||..+++.. .+. ..+.+++|||||+.|++++.| .+++||+....
T Consensus 596 ~d~~~~~~~-~l~---~~v~~~~~S~DG~~l~~~~~~-~i~~~d~~~~~ 639 (1045)
T 1k32_A 596 YDVKTRKVT-EVK---NNLTDLRLSADRKTVMVRKDD-GKIYTFPLEKP 639 (1045)
T ss_dssp EETTTCCEE-EEE---EEEEEEEECTTSCEEEEEETT-SCEEEEESSCT
T ss_pred EECCCCcEE-Eee---cCcceEEECCCCCEEEEEcCC-cEEEEeCccCc
Confidence 999888753 333 568999999999999999876 89999997543
No 149
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.70 E-value=2.4e-14 Score=127.01 Aligned_cols=270 Identities=13% Similarity=0.089 Sum_probs=156.5
Q ss_pred EEEEccCch--hhcccccccccc-CcCcccccCCCcccceEEEEEcCCCCEEEEeeCC----CeEEEEECCC--CceE--
Q 022074 6 HIVDVGSGT--MESLANVTEIHD-GLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD----DCIYVYDLEA--NKLS-- 74 (303)
Q Consensus 6 ~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~D----g~v~lwd~~~--~~~~-- 74 (303)
+.+-||+-+ .+.-|.+|+.-. ..+....... +......++|+|||++|++++.+ +.|.+|++.. +...
T Consensus 14 ~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~ 92 (361)
T 3scy_A 14 LTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA-EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLL 92 (361)
T ss_dssp EEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE-ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEE
T ss_pred eEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc-cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEe
Confidence 556677432 234566766522 1222211112 55667789999999999999886 7999998865 4432
Q ss_pred EEEecccCCeEEEEEccCCCcEEEEe-cCCCeEEEEcCccccCCCccceee--c--------ccccCeEEEEeCCCCCEE
Q 022074 75 LRILAHTSDVNTVCFGDESGHLIYSG-SDDNLCKVWDRRCLNVKGKPAGVL--M--------GHLEGITFIDSRGDGRYL 143 (303)
Q Consensus 75 ~~~~~h~~~v~~l~~~~~~~~~l~s~-s~dg~v~lWd~~~~~~~~~~~~~~--~--------~h~~~v~~~~~~~~~~~l 143 (303)
.....+......+++ +++.++++ ..+++|.+|++............+ . .+...+.++.++|+|+++
T Consensus 93 ~~~~~~~~~p~~~~~---dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l 169 (361)
T 3scy_A 93 NTQKTMGADPCYLTT---NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYL 169 (361)
T ss_dssp EEEECSSSCEEEEEE---CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEE
T ss_pred eEeccCCCCcEEEEE---CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEE
Confidence 222334456677777 35555555 468899999975321111111111 1 112335789999999966
Q ss_pred EEEe-CCCcEEEEEcccccC----C-c-------ccccCccceeeeceeeeCCCCCccccCCC--CCcceEEecccc-ee
Q 022074 144 ISNG-KDQAIKLWDIRKMSS----N-A-------SCNLGFRSYEWDYRWMDYPPQARDLKHPC--DQSVATYKGHSV-LR 207 (303)
Q Consensus 144 ~s~~-~D~~v~lWdl~~~~~----~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~ 207 (303)
+.++ .++.|++|++..... . . ..... .......+.+.++.+.+.... ...+..++-... ..
T Consensus 170 ~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~ 246 (361)
T 3scy_A 170 LADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVA---PGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLD 246 (361)
T ss_dssp EEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECC---TTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEE
T ss_pred EEEeCCCCEEEEEEEcCCCCcccccceeecccccceecC---CCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceE
Confidence 5544 589999999874321 0 0 00000 001122345556655432222 223333321110 00
Q ss_pred eeEEE---------eeeeeeeCCCeEEEEEeC--CCeEEEEECC--CCe--EEEEeecCCCCeEEEEECCCCCeEEEEe-
Q 022074 208 TLIRC---------HFSPVYSTGQKYIYTGSH--DSCVYVYDLV--SGE--QVAALKYHTSPVRDCSWHPSQPMLVSSS- 271 (303)
Q Consensus 208 ~~~~~---------~~~~~~s~~~~~latg~~--dg~i~iwd~~--~~~--~~~~~~~h~~~I~~v~~sp~~~~las~s- 271 (303)
..... .....|+|++++|++++. ++.|.+|++. +++ .+..+.. ...+.+++|+||+++|++++
T Consensus 247 ~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~ 325 (361)
T 3scy_A 247 EIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACR 325 (361)
T ss_dssp EEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEET
T ss_pred EeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEEC
Confidence 01000 124558999998877665 4899999985 444 3445544 55788999999999888887
Q ss_pred CCCCEEEeecCC
Q 022074 272 WDGDVVRWEFPG 283 (303)
Q Consensus 272 ~Dg~i~~Wd~~~ 283 (303)
.++.+.+|++..
T Consensus 326 ~~~~v~v~~~d~ 337 (361)
T 3scy_A 326 DTNVIQIFERDQ 337 (361)
T ss_dssp TTTEEEEEEECT
T ss_pred CCCCEEEEEEEC
Confidence 679999987653
No 150
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.68 E-value=5.6e-16 Score=146.52 Aligned_cols=213 Identities=11% Similarity=0.066 Sum_probs=142.3
Q ss_pred hccccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEeeC---CCeEEEEECCC--CceEEEEecccCCeEEEEEc
Q 022074 16 ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS---DDCIYVYDLEA--NKLSLRILAHTSDVNTVCFG 90 (303)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~---Dg~v~lwd~~~--~~~~~~~~~h~~~v~~l~~~ 90 (303)
+..+.||.+ +|.+.. ....++...+.+++|+|| +.+++++. +...+||.++. ......+... ..+...+|+
T Consensus 43 ~g~~~lw~~-~~g~~~-~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~~l~~~-~~~~~~~~s 118 (582)
T 3o4h_A 43 EGSVNAYLY-DGGETV-KLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQRLEAV-KPMRILSGV 118 (582)
T ss_dssp TTEEEEEEE-ETTEEE-ECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCEECTTS-CSBEEEEEE
T ss_pred CCceeEEEE-cCCCcE-eeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccccccCC-CCceeeeeC
Confidence 556678885 565442 221333368999999999 77777764 45566665533 2222233332 334456776
Q ss_pred cCCCcEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCC----CcEEEEEcccccCCccc
Q 022074 91 DESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKD----QAIKLWDIRKMSSNASC 166 (303)
Q Consensus 91 ~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D----~~v~lWdl~~~~~~~~~ 166 (303)
++....+++.+.++.+.+||+.. ++.. .+..+.. ..+.++|||++|++++.| ..|++||+.....
T Consensus 119 ~dg~~~~~~s~~~~~~~l~d~~~----g~~~-~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~---- 187 (582)
T 3o4h_A 119 DTGEAVVFTGATEDRVALYALDG----GGLR-ELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGL---- 187 (582)
T ss_dssp ECSSCEEEEEECSSCEEEEEEET----TEEE-EEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCC----
T ss_pred CCCCeEEEEecCCCCceEEEccC----CcEE-EeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCc----
Confidence 65444444444444555999752 2222 2323333 678899999999988877 7899999753221
Q ss_pred ccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCC--eEEEEECCCCeE
Q 022074 167 NLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDS--CVYVYDLVSGEQ 244 (303)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg--~i~iwd~~~~~~ 244 (303)
..+.++.. ....+.|||||++|+++..++ .|++||+.+++.
T Consensus 188 -------------------------------~~l~~~~~------~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~ 230 (582)
T 3o4h_A 188 -------------------------------RVFDSGEG------SFSSASISPGMKVTAGLETAREARLVTVDPRDGSV 230 (582)
T ss_dssp -------------------------------EEECCSSC------EEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCE
T ss_pred -------------------------------eEeecCCC------ccccceECCCCCEEEEccCCCeeEEEEEcCCCCcE
Confidence 01111111 113567999999999888888 999999999887
Q ss_pred EEEeecCCCCeEEEE--------ECCCCCeEEEEeCCCCEEEeec
Q 022074 245 VAALKYHTSPVRDCS--------WHPSQPMLVSSSWDGDVVRWEF 281 (303)
Q Consensus 245 ~~~~~~h~~~I~~v~--------~sp~~~~las~s~Dg~i~~Wd~ 281 (303)
. .+..|...+..++ |||||.++++++.|+++++|++
T Consensus 231 ~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 231 E-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp E-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred E-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 7 7778887788888 9999999999999999999998
No 151
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.68 E-value=4.3e-15 Score=131.01 Aligned_cols=238 Identities=11% Similarity=0.107 Sum_probs=145.2
Q ss_pred EEEEccCc--hhhcccccccccc-CcCcccccCCCcccceEEEEEcCCCCEEEEeeC---CCeEEEEECCCCce--EEEE
Q 022074 6 HIVDVGSG--TMESLANVTEIHD-GLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS---DDCIYVYDLEANKL--SLRI 77 (303)
Q Consensus 6 ~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~---Dg~v~lwd~~~~~~--~~~~ 77 (303)
|.|-||+- +-+.-+.||..-. ..+.......++......++|+|||+ +++++. ++.|++||+.++.. ...+
T Consensus 3 ~~~~vg~y~~~~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~ 81 (347)
T 3hfq_A 3 ERILFGTYTKKTSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTV 81 (347)
T ss_dssp EEEEEEECCSSSCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEE
T ss_pred cEEEEEeccCCCCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeee
Confidence 55666632 2233455555521 11221112233445677899999999 666554 68999999987763 2333
Q ss_pred ecccCCeEEEEEccCCCcEEEEec-CCCeEEEEcCccccCCCccceeecc---------cccCeEEEEeCCCCCEEEEEe
Q 022074 78 LAHTSDVNTVCFGDESGHLIYSGS-DDNLCKVWDRRCLNVKGKPAGVLMG---------HLEGITFIDSRGDGRYLISNG 147 (303)
Q Consensus 78 ~~h~~~v~~l~~~~~~~~~l~s~s-~dg~v~lWd~~~~~~~~~~~~~~~~---------h~~~v~~~~~~~~~~~l~s~~ 147 (303)
..+...+..++|++ +++.|++++ .+++|++||+.... .......+.. +...+.+++++|+|+++++..
T Consensus 82 ~~~~~~p~~~a~sp-dg~~l~~~~~~~~~v~v~~~~~~g-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~ 159 (347)
T 3hfq_A 82 VAPGTPPAYVAVDE-ARQLVYSANYHKGTAEVMKIAADG-ALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDL 159 (347)
T ss_dssp EEESCCCSEEEEET-TTTEEEEEETTTTEEEEEEECTTS-CEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEET
T ss_pred ecCCCCCEEEEECC-CCCEEEEEeCCCCEEEEEEeCCCC-CeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeC
Confidence 45677888999976 467666666 78999999974211 1111111111 122477899999999777777
Q ss_pred CCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEE
Q 022074 148 KDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYT 227 (303)
Q Consensus 148 ~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~lat 227 (303)
.++.|++||+..... .. . . .....+ .+.. .....|+|+++++++
T Consensus 160 ~~~~v~~~~~~~~g~---~~----~-~---~~~~~~-----------------~g~~--------p~~~~~spdg~~l~v 203 (347)
T 3hfq_A 160 GSDKVYVYNVSDAGQ---LS----E-Q---SVLTME-----------------AGFG--------PRHLVFSPDGQYAFL 203 (347)
T ss_dssp TTTEEEEEEECTTSC---EE----E-E---EEEECC-----------------TTCC--------EEEEEECTTSSEEEE
T ss_pred CCCEEEEEEECCCCc---EE----E-e---eeEEcC-----------------CCCC--------CceEEECCCCCEEEE
Confidence 789999999862100 00 0 0 000000 0000 012357889986555
Q ss_pred -EeCCCeEEEEECCC--CeE--EEEeecCC------CCeEEEEECCCCCeE-EEEeCCCCEEEeecC
Q 022074 228 -GSHDSCVYVYDLVS--GEQ--VAALKYHT------SPVRDCSWHPSQPML-VSSSWDGDVVRWEFP 282 (303)
Q Consensus 228 -g~~dg~i~iwd~~~--~~~--~~~~~~h~------~~I~~v~~sp~~~~l-as~s~Dg~i~~Wd~~ 282 (303)
+..++.|++|++.. ++. +..+.... ..+..++|+|||++| ++...++.+.+|++.
T Consensus 204 ~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~ 270 (347)
T 3hfq_A 204 AGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVT 270 (347)
T ss_dssp EETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEEC
T ss_pred EeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEEC
Confidence 56789999999874 543 23333222 348899999999976 666678999999986
No 152
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.67 E-value=2.4e-15 Score=151.67 Aligned_cols=195 Identities=14% Similarity=0.115 Sum_probs=150.8
Q ss_pred cccceEEEEEc-CCCCEEEEeeCCCeEEEEECCCCceEEEEecccC-CeEEEEEccCCCcEEEEecCCCeEE-EEcCccc
Q 022074 38 YSFGIFSLKFS-TDGRELVAGSSDDCIYVYDLEANKLSLRILAHTS-DVNTVCFGDESGHLIYSGSDDNLCK-VWDRRCL 114 (303)
Q Consensus 38 ~~~~v~~l~~s-~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~-~v~~l~~~~~~~~~l~s~s~dg~v~-lWd~~~~ 114 (303)
|...+.+++|+ |||+++++++ ++.+++|++.++... .+..|.. .+..++|+ +++.++.++.+..+. +||...
T Consensus 294 ~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~s--dg~~l~~~s~~~~l~~~~d~~~- 368 (1045)
T 1k32_A 294 SIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL-KVPEPLRIRYVRRGGD--TKVAFIHGTREGDFLGIYDYRT- 368 (1045)
T ss_dssp ECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEE-ECSCCSCEEEEEECSS--SEEEEEEEETTEEEEEEEETTT-
T ss_pred cccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceE-EccCCCcceEEeeeEc--CCCeEEEEECCCceEEEEECCC-
Confidence 44578999999 9999999887 788999999887644 4666766 78999996 577888888788888 888642
Q ss_pred cCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCC
Q 022074 115 NVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCD 194 (303)
Q Consensus 115 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (303)
.. ...+.+|...+..++++|+|++|++++.++.|++||+......
T Consensus 369 ---~~-~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~------------------------------- 413 (1045)
T 1k32_A 369 ---GK-AEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPT------------------------------- 413 (1045)
T ss_dssp ---CC-EEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE-------------------------------
T ss_pred ---CC-ceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceE-------------------------------
Confidence 12 2234477788999999999999999999999999998642210
Q ss_pred CcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCC----------eEEEEECCCCeEEEEeecCCCCeEEEEECCCC
Q 022074 195 QSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDS----------CVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQ 264 (303)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg----------~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~ 264 (303)
....++... ...+.||||+++|++++.++ .|++||+.+++ +..+..|...+.+++|+|||
T Consensus 414 ---~~~~~~~~~------v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG 483 (1045)
T 1k32_A 414 ---VIERSREAM------ITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADS 483 (1045)
T ss_dssp ---EEEECSSSC------CCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTS
T ss_pred ---EeccCCCCC------ccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCC
Confidence 001111100 12345889999999887754 99999999887 66777888889999999999
Q ss_pred CeEEEEeCCCCEEEeecC
Q 022074 265 PMLVSSSWDGDVVRWEFP 282 (303)
Q Consensus 265 ~~las~s~Dg~i~~Wd~~ 282 (303)
++|+.++.++....|+..
T Consensus 484 ~~l~~~s~~~~~~~~~~~ 501 (1045)
T 1k32_A 484 KNLYYLSYRSLDPSPDRV 501 (1045)
T ss_dssp CEEEEEESCCCCCEECSS
T ss_pred CEEEEEecccCCcCcchh
Confidence 999999999888888754
No 153
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.67 E-value=8.6e-15 Score=141.27 Aligned_cols=237 Identities=13% Similarity=0.102 Sum_probs=147.8
Q ss_pred cceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccc-cCCC
Q 022074 40 FGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCL-NVKG 118 (303)
Q Consensus 40 ~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~-~~~~ 118 (303)
.+|.+++|+|| +.++.+ .|++|++||+.+++.. .+..+...+..++|+| +++.|+++ .|+.|++||+... +..+
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~Sp-dG~~la~~-~~~~i~v~~~~~~~~~~g 156 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLARKVT-YLFDTNEETASLDFSP-VGDRVAYV-RNHNLYIARGGKLGEGMS 156 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTTEEE-EEECCTTCCTTCEECT-TSSEEEEE-ETTEEEEEECBCTTSCCC
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCCceE-EccCCcccccCCcCCC-CCCEEEEE-ECCeEEEEecCcccccCC
Confidence 57999999999 666655 4699999999988653 4556777888999976 57788775 6799999998630 0002
Q ss_pred ccceeecccccC--------------eEEEEeCCCCCEEEEEe---------------------------------CCCc
Q 022074 119 KPAGVLMGHLEG--------------ITFIDSRGDGRYLISNG---------------------------------KDQA 151 (303)
Q Consensus 119 ~~~~~~~~h~~~--------------v~~~~~~~~~~~l~s~~---------------------------------~D~~ 151 (303)
........+... +..+.|+|||++|++++ .+..
T Consensus 157 ~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~ 236 (706)
T 2z3z_A 157 RAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVT 236 (706)
T ss_dssp CCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEE
T ss_pred CcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeE
Confidence 222222222222 47888999999999987 4577
Q ss_pred EEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCC-C-----CcceEEecccc--eeeeEEE--------eee
Q 022074 152 IKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPC-D-----QSVATYKGHSV--LRTLIRC--------HFS 215 (303)
Q Consensus 152 v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~--~~~~~~~--------~~~ 215 (303)
|++||+........... ......+..+.+.|+.+.+.... + ..+..++.... ...+... ...
T Consensus 237 l~~~d~~~~~~~~~~~~--~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 314 (706)
T 2z3z_A 237 VGIYHLATGKTVYLQTG--EPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHP 314 (706)
T ss_dssp EEEEETTTTEEEECCCC--SCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSC
T ss_pred EEEEECCCCceEeeccC--CCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCC
Confidence 99999865321110000 00011122344555555333211 1 12222222111 1111110 123
Q ss_pred eeeeC--CCeEEEEEeCCCeEEEEECC-CCeEEEEeecCCCCeEE-EEECCCCCeEEEEeC-CC----CEEEeecCC
Q 022074 216 PVYST--GQKYIYTGSHDSCVYVYDLV-SGEQVAALKYHTSPVRD-CSWHPSQPMLVSSSW-DG----DVVRWEFPG 283 (303)
Q Consensus 216 ~~~s~--~~~~latg~~dg~i~iwd~~-~~~~~~~~~~h~~~I~~-v~~sp~~~~las~s~-Dg----~i~~Wd~~~ 283 (303)
+.|+| +++++++++.|+.+++|++. +++.+..+..|...+.+ ++|+|+++.|+.++. ++ .|..||..+
T Consensus 315 ~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~ 391 (706)
T 2z3z_A 315 LTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKG 391 (706)
T ss_dssp CEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTC
T ss_pred ceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCC
Confidence 56899 99999999999999999876 66777788888888887 899999987655544 44 455555443
No 154
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.66 E-value=4.8e-15 Score=132.16 Aligned_cols=274 Identities=11% Similarity=0.098 Sum_probs=158.6
Q ss_pred EEEEEccCchhhcccccccc--ccCc-CcccccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECC-CCceEEEEecc
Q 022074 5 VHIVDVGSGTMESLANVTEI--HDGL-DFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLE-ANKLSLRILAH 80 (303)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~-~~~~~~~~~~h 80 (303)
+|-|-||+-+...-|.+.++ -+|. ........+....+..++|+|+|++|++++.+ .|.+||+. ++++.... .+
T Consensus 2 ~~~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~-~~ 79 (365)
T 1jof_A 2 LHHLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEA-SH 79 (365)
T ss_dssp EEEEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEE-EE
T ss_pred cEEEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEee-Ee
Confidence 46677887554333444443 1221 11111111233357789999999999999888 89999997 77654322 22
Q ss_pred c--CCeEEEEEccCCCc--EEEEec-------------CCCeEEEEcCccccCCCccceeec----ccccCeEEEEeCCC
Q 022074 81 T--SDVNTVCFGDESGH--LIYSGS-------------DDNLCKVWDRRCLNVKGKPAGVLM----GHLEGITFIDSRGD 139 (303)
Q Consensus 81 ~--~~v~~l~~~~~~~~--~l~s~s-------------~dg~v~lWd~~~~~~~~~~~~~~~----~h~~~v~~~~~~~~ 139 (303)
. +....++|+| +++ ++++++ .++++.+|++.. .++....+. .+...+..+.++|+
T Consensus 80 ~~~g~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~spd 155 (365)
T 1jof_A 80 PIGGHPRANDADT-NTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSE---TGKLEKNVQNYEYQENTGIHGMVFDPT 155 (365)
T ss_dssp ECCSSGGGGCTTS-CCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECT---TCCEEEEEEEEECCTTCCEEEEEECTT
T ss_pred ecCCCCccEEECC-CCCEEEEEEecCCcceeccceeecCCceEEEEccCC---CCcCcceEeeEEeCCCCcceEEEECCC
Confidence 1 3355678865 466 345664 689999999752 122222222 24456889999999
Q ss_pred CCEEEEEe-CCCcEEEEEcc-cccCCcccccCccceeeeceeeeCCCCCccccCCC--CCcceEE--ec--ccce---ee
Q 022074 140 GRYLISNG-KDQAIKLWDIR-KMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPC--DQSVATY--KG--HSVL---RT 208 (303)
Q Consensus 140 ~~~l~s~~-~D~~v~lWdl~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~--~~~~---~~ 208 (303)
|++++++. .++.|++||+. ...................+.+.+.++.+.+.... ...+..+ +. .... ..
T Consensus 156 G~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~ 235 (365)
T 1jof_A 156 ETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHS 235 (365)
T ss_dssp SSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEE
T ss_pred CCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccce
Confidence 99887765 46899999986 22211000000000011123345555554432211 1222222 11 0000 00
Q ss_pred e--E-------E-------Eeeeee-eeCCCeEEEEEeCC-C-----eEEEEECC-CCeEEE---EeecCCCCeEEEEEC
Q 022074 209 L--I-------R-------CHFSPV-YSTGQKYIYTGSHD-S-----CVYVYDLV-SGEQVA---ALKYHTSPVRDCSWH 261 (303)
Q Consensus 209 ~--~-------~-------~~~~~~-~s~~~~~latg~~d-g-----~i~iwd~~-~~~~~~---~~~~h~~~I~~v~~s 261 (303)
+ + . ...... ++|++++|++++.+ . +|.+|++. +++... ....+...+..++|+
T Consensus 236 ~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~s 315 (365)
T 1jof_A 236 FPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVS 315 (365)
T ss_dssp EESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEE
T ss_pred EEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceec
Confidence 0 0 0 123456 89999988776543 2 89999986 666433 233455567889999
Q ss_pred C---CCCeEEEEeCC-CCEEEeecCCC
Q 022074 262 P---SQPMLVSSSWD-GDVVRWEFPGN 284 (303)
Q Consensus 262 p---~~~~las~s~D-g~i~~Wd~~~~ 284 (303)
| |+++|++++.+ +++++|++...
T Consensus 316 p~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 316 PCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp ECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 9 89999998875 89999998653
No 155
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.66 E-value=1.3e-14 Score=126.70 Aligned_cols=190 Identities=13% Similarity=0.185 Sum_probs=123.3
Q ss_pred EEEeeCCCeEEEEECCC-Cce-EEEEecccCCeEEEEEccCCCcEEEEecCC-CeEEEEcCccccCCCccceeecccccC
Q 022074 54 LVAGSSDDCIYVYDLEA-NKL-SLRILAHTSDVNTVCFGDESGHLIYSGSDD-NLCKVWDRRCLNVKGKPAGVLMGHLEG 130 (303)
Q Consensus 54 l~sgs~Dg~v~lwd~~~-~~~-~~~~~~h~~~v~~l~~~~~~~~~l~s~s~d-g~v~lWd~~~~~~~~~~~~~~~~h~~~ 130 (303)
+++++.|+.|++||+.. +.. ......|...+..++|+| +++.+++++.+ +.|++|++............+..+. .
T Consensus 8 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~ 85 (343)
T 1ri6_A 8 YIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSP-DKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-S 85 (343)
T ss_dssp EEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-C
T ss_pred EEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECC-CCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-C
Confidence 44447899999999963 322 233456777889999976 46767777665 9999999752111111222333333 6
Q ss_pred eEEEEeCCCCCEEEEEeC-CCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeee
Q 022074 131 ITFIDSRGDGRYLISNGK-DQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTL 209 (303)
Q Consensus 131 v~~~~~~~~~~~l~s~~~-D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (303)
+..++++++++++++++. ++.|++||+.... ... .+........
T Consensus 86 ~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~-~~~------------------------------~~~~~~~~~~---- 130 (343)
T 1ri6_A 86 LTHISTDHQGQFVFVGSYNAGNVSVTRLEDGL-PVG------------------------------VVDVVEGLDG---- 130 (343)
T ss_dssp CSEEEECTTSSEEEEEETTTTEEEEEEEETTE-EEE------------------------------EEEEECCCTT----
T ss_pred CcEEEEcCCCCEEEEEecCCCeEEEEECCCCc-ccc------------------------------ccccccCCCC----
Confidence 788999999998876664 8899999984100 000 0000000000
Q ss_pred EEEeeeeeeeCCCeEEEEEe-CCCeEEEEECCC-CeEEE----EeecC-CCCeEEEEECCCCCeEEE-EeCCCCEEEeec
Q 022074 210 IRCHFSPVYSTGQKYIYTGS-HDSCVYVYDLVS-GEQVA----ALKYH-TSPVRDCSWHPSQPMLVS-SSWDGDVVRWEF 281 (303)
Q Consensus 210 ~~~~~~~~~s~~~~~latg~-~dg~i~iwd~~~-~~~~~----~~~~h-~~~I~~v~~sp~~~~las-~s~Dg~i~~Wd~ 281 (303)
.....++|+++++++++ .++.|++||+.+ ++... .+..+ ...+..++|+|++++|+. +..++.+.+|++
T Consensus 131 ---~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~ 207 (343)
T 1ri6_A 131 ---CHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWEL 207 (343)
T ss_dssp ---BCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEES
T ss_pred ---ceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEe
Confidence 11234778898888777 899999999987 65422 23333 347889999999996654 458899999998
Q ss_pred CC
Q 022074 282 PG 283 (303)
Q Consensus 282 ~~ 283 (303)
..
T Consensus 208 ~~ 209 (343)
T 1ri6_A 208 KD 209 (343)
T ss_dssp SC
T ss_pred cC
Confidence 53
No 156
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.64 E-value=9.5e-15 Score=140.96 Aligned_cols=256 Identities=11% Similarity=0.052 Sum_probs=152.0
Q ss_pred ccccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCC-----CceEEEEecccCC--------
Q 022074 17 SLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEA-----NKLSLRILAHTSD-------- 83 (303)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~-----~~~~~~~~~h~~~-------- 83 (303)
..+.||+.-+|. .. ....|...+.+++|||||++|+++ .|++|++||+.+ ++.......+...
T Consensus 101 ~~i~~~d~~~~~-~~--~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~ 176 (706)
T 2z3z_A 101 GGLVGFDMLARK-VT--YLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVH 176 (706)
T ss_dssp TEEEEEETTTTE-EE--EEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCG
T ss_pred CEEEEEECCCCc-eE--EccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchh
Confidence 445566654442 11 123445668889999999999985 789999999988 7654323333332
Q ss_pred ------eEEEEEccCCCcEEEEec---------------------------------CCCeEEEEcCccccCCCccceee
Q 022074 84 ------VNTVCFGDESGHLIYSGS---------------------------------DDNLCKVWDRRCLNVKGKPAGVL 124 (303)
Q Consensus 84 ------v~~l~~~~~~~~~l~s~s---------------------------------~dg~v~lWd~~~~~~~~~~~~~~ 124 (303)
+..+.|+| +++.|++++ .+..|++||+... ......
T Consensus 177 ~ee~~~~~~~~~Sp-Dg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~----~~~~~~ 251 (706)
T 2z3z_A 177 QREFGIEKGTFWSP-KGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATG----KTVYLQ 251 (706)
T ss_dssp GGCTTCCCSEEECT-TSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTT----EEEECC
T ss_pred hhhcCCCceEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCC----ceEeec
Confidence 47899976 577888776 4468999997532 211112
Q ss_pred --cccccCeEEEEeCCCCCEEEEEeCCC-----cEEEEEcccccCCcccccCccceeee--ceeeeCCC--CCccccCCC
Q 022074 125 --MGHLEGITFIDSRGDGRYLISNGKDQ-----AIKLWDIRKMSSNASCNLGFRSYEWD--YRWMDYPP--QARDLKHPC 193 (303)
Q Consensus 125 --~~h~~~v~~~~~~~~~~~l~s~~~D~-----~v~lWdl~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~ 193 (303)
..|...+..++|+|+|++|++++.|+ .|++||+........... .....+. .....+.+ +.+.+....
T Consensus 252 ~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~-~~~~~~~~~~~~~~~sp~~dg~~l~~~~ 330 (706)
T 2z3z_A 252 TGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFV-ETDKHYVEPLHPLTFLPGSNNQFIWQSR 330 (706)
T ss_dssp CCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEE-EECSSCCCCCSCCEECTTCSSEEEEEEC
T ss_pred cCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEE-ccCCCeECccCCceeecCCCCEEEEEEc
Confidence 24666789999999999999988776 999999865411000000 0000000 01123334 433222111
Q ss_pred -CC--cceEEecc-cceeeeEEE---eee-eeeeCCCeEEEEEe-CCC----eEEEEECCCCeEEEEeecCCCCeEEEEE
Q 022074 194 -DQ--SVATYKGH-SVLRTLIRC---HFS-PVYSTGQKYIYTGS-HDS----CVYVYDLVSGEQVAALKYHTSPVRDCSW 260 (303)
Q Consensus 194 -~~--~~~~~~~~-~~~~~~~~~---~~~-~~~s~~~~~latg~-~dg----~i~iwd~~~~~~~~~~~~h~~~I~~v~~ 260 (303)
+. .+..++.. .....+... ... +.|+++++.|+.++ .++ .|+.||..+++ +..+. |...+.+++|
T Consensus 331 ~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~-~~~~~~~~~~ 408 (706)
T 2z3z_A 331 RDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLT-PESGMHRTQL 408 (706)
T ss_dssp TTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESC-CSSSEEEEEE
T ss_pred cCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceecc-CCCceEEEEE
Confidence 11 12222211 111111000 111 46788988776654 444 78888887766 34443 6778999999
Q ss_pred CCCCCeEEEEeCC----CCEEEeecCCC
Q 022074 261 HPSQPMLVSSSWD----GDVVRWEFPGN 284 (303)
Q Consensus 261 sp~~~~las~s~D----g~i~~Wd~~~~ 284 (303)
|||+++|+.++.+ +.+++||..+.
T Consensus 409 spdg~~l~~~~~~~~~p~~i~l~d~~~~ 436 (706)
T 2z3z_A 409 SPDGSAIIDIFQSPTVPRKVTVTNIGKG 436 (706)
T ss_dssp CTTSSEEEEEEECSSCSCEEEEEESSSC
T ss_pred CCCCCEEEEEecCCCCCcEEEEEECCCC
Confidence 9999988776554 45999998654
No 157
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.63 E-value=5.2e-14 Score=122.58 Aligned_cols=221 Identities=10% Similarity=0.058 Sum_probs=136.3
Q ss_pred CEEEEeeCCCeEEEEECCCCceEEEEeccc-C-CeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCccceeec-cc-
Q 022074 52 RELVAGSSDDCIYVYDLEANKLSLRILAHT-S-DVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLM-GH- 127 (303)
Q Consensus 52 ~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~-~-~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~-~h- 127 (303)
+++++++.+++|++||+.+++....+.... . .+..++|+++...+++++..++.|.+||+.. ++....+. ++
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~----~~~~~~~~~~~~ 77 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVT----GETLGRIDLSTP 77 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTT----CCEEEEEECCBT
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCC----CCeEeeEEcCCc
Confidence 478999999999999999988766554322 1 4788999765444567777889999999753 22232222 11
Q ss_pred ---ccCeEEEEeCCCCCEEEEEe------------CCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCC
Q 022074 128 ---LEGITFIDSRGDGRYLISNG------------KDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHP 192 (303)
Q Consensus 128 ---~~~v~~~~~~~~~~~l~s~~------------~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (303)
...+..+.++++++++++++ .++.|.+||+...........+. ....+.+.++.+.+...
T Consensus 78 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~~~ 152 (337)
T 1pby_B 78 EERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPR-----QITMLAWARDGSKLYGL 152 (337)
T ss_dssp TEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCS-----SCCCEEECTTSSCEEEE
T ss_pred ccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCC-----CcceeEECCCCCEEEEe
Confidence 22566788999999888886 57999999986533221111110 11122334444333222
Q ss_pred CCCcceEEeccccee-eeEEEe---eeeeeeCCCeEEEEEeCC-C-----------------------eEEEEECCCCeE
Q 022074 193 CDQSVATYKGHSVLR-TLIRCH---FSPVYSTGQKYIYTGSHD-S-----------------------CVYVYDLVSGEQ 244 (303)
Q Consensus 193 ~~~~~~~~~~~~~~~-~~~~~~---~~~~~s~~~~~latg~~d-g-----------------------~i~iwd~~~~~~ 244 (303)
...+..++-..... ...... ....++|++++++..+.+ + .|++||..+++.
T Consensus 153 -~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~ 231 (337)
T 1pby_B 153 -GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEM 231 (337)
T ss_dssp -SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCE
T ss_pred -CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCc
Confidence 22233332211100 000000 112466777765544432 2 478999998876
Q ss_pred E-EEeecCCCCeEEEEECCCCCeEEEEeCCCCEEEeecCCC
Q 022074 245 V-AALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 245 ~-~~~~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~~ 284 (303)
. ..+..+...+.+++|+|++++|+++ ++.|.+||+...
T Consensus 232 ~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~ 270 (337)
T 1pby_B 232 AMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKN 270 (337)
T ss_dssp EEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTT
T ss_pred eEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCC
Confidence 4 3345566788999999999998888 799999998643
No 158
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.63 E-value=1.8e-15 Score=146.34 Aligned_cols=204 Identities=12% Similarity=0.091 Sum_probs=132.6
Q ss_pred EEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccC---CeEEEEEccCCCcEEEEecC---------CCeEEEEcC
Q 022074 44 SLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTS---DVNTVCFGDESGHLIYSGSD---------DNLCKVWDR 111 (303)
Q Consensus 44 ~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~---~v~~l~~~~~~~~~l~s~s~---------dg~v~lWd~ 111 (303)
+++|+|+|++++ .+.|++|++||+.+++....+..|.. .+..++|+| +++.|++++. +++|++||+
T Consensus 20 ~~~~s~dg~~~~-~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~Sp-Dg~~la~~~~~~~~~~~s~~~~i~~~d~ 97 (719)
T 1z68_A 20 FPNWISGQEYLH-QSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSP-DRQFVYLESDYSKLWRYSYTATYYIYDL 97 (719)
T ss_dssp CCEESSSSEEEE-ECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECT-TSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred ccEECCCCeEEE-EcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECC-CCCeEEEEecCceeEEeecceEEEEEEC
Confidence 678999996555 45699999999999986654444433 488999976 5788887765 789999997
Q ss_pred ccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccC
Q 022074 112 RCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKH 191 (303)
Q Consensus 112 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (303)
....... ...+ ...+..++|+|||+.|+.+. |+.|++||+...........
T Consensus 98 ~~g~~~~--~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~----------------------- 148 (719)
T 1z68_A 98 SNGEFVR--GNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFN----------------------- 148 (719)
T ss_dssp TTTEECC--SSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCC-----------------------
T ss_pred CCCcccc--ceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecC-----------------------
Confidence 6322100 0112 24577889999999999885 78999999864321100000
Q ss_pred CCCCcceEEeccccee---eeEEEeeeeeeeCCCeEEEEEeCCC----------------------------------eE
Q 022074 192 PCDQSVATYKGHSVLR---TLIRCHFSPVYSTGQKYIYTGSHDS----------------------------------CV 234 (303)
Q Consensus 192 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~s~~~~~latg~~dg----------------------------------~i 234 (303)
......+.|+.... ........+.|||||++|++++.|. .|
T Consensus 149 --~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l 226 (719)
T 1z68_A 149 --GRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRI 226 (719)
T ss_dssp --CBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEE
T ss_pred --CCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEE
Confidence 00000111211000 0000012456889999999987652 89
Q ss_pred EEEECCCCeEE--------EEeecCCCCeEEEEECCCCCeEEEEeCCC----CEEEee
Q 022074 235 YVYDLVSGEQV--------AALKYHTSPVRDCSWHPSQPMLVSSSWDG----DVVRWE 280 (303)
Q Consensus 235 ~iwd~~~~~~~--------~~~~~h~~~I~~v~~sp~~~~las~s~Dg----~i~~Wd 280 (303)
++||+.+++.. ..+..|...+.+++||||++++++....+ .|.+||
T Consensus 227 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d 284 (719)
T 1z68_A 227 FIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICD 284 (719)
T ss_dssp EEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEE
T ss_pred EEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEc
Confidence 99999887642 11335788899999999988877754332 388888
No 159
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.57 E-value=3.5e-14 Score=138.13 Aligned_cols=112 Identities=15% Similarity=0.121 Sum_probs=84.9
Q ss_pred ccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCC---e--EEEEEccCCCcEEEEecCC---------C
Q 022074 39 SFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSD---V--NTVCFGDESGHLIYSGSDD---------N 104 (303)
Q Consensus 39 ~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~---v--~~l~~~~~~~~~l~s~s~d---------g 104 (303)
.....++.|+|||++++++ |++|++||+.+++....+..|... + ..+.|+| +++.++.++.+ +
T Consensus 16 ~~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sp-dg~~l~~~~~~~~~~r~~~~~ 92 (740)
T 4a5s_A 16 RLKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISP-DGQFILLEYNYVKQWRHSYTA 92 (740)
T ss_dssp CCCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECT-TSSEEEEEEEEEECSSSCEEE
T ss_pred cccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECC-CCCEEEEEECCeeeEEEccce
Confidence 3346689999999988886 999999999999876656666532 2 3478876 57888888765 5
Q ss_pred eEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEccc
Q 022074 105 LCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRK 159 (303)
Q Consensus 105 ~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~ 159 (303)
.+.+||+... + ...+..|...+...+|+|||+.|+.+ .|+.|++||+..
T Consensus 93 ~~~~~d~~~~----~-~~~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~ 141 (740)
T 4a5s_A 93 SYDIYDLNKR----Q-LITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPN 141 (740)
T ss_dssp EEEEEETTTT----E-ECCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTT
T ss_pred EEEEEECCCC----c-EEEcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCC
Confidence 6679997532 2 22355677789999999999999888 478999999864
No 160
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.55 E-value=5.3e-12 Score=108.09 Aligned_cols=237 Identities=11% Similarity=0.125 Sum_probs=145.6
Q ss_pred CCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEe------cccCCeEEEEEccCCCcEEEEecC-CCeEEE
Q 022074 36 GGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRIL------AHTSDVNTVCFGDESGHLIYSGSD-DNLCKV 108 (303)
Q Consensus 36 ~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~------~h~~~v~~l~~~~~~~~~l~s~s~-dg~v~l 108 (303)
.|+-....+++++++|+.+++.+.++.|++||.+ ++....+. .+...+..+++.+++++++++... ++.|++
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~ 104 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQI 104 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEE
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEE
Confidence 4566678999999999988888889999999987 44444442 233567888885455667666643 889999
Q ss_pred EcCccccCCCccceeec-ccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCc
Q 022074 109 WDRRCLNVKGKPAGVLM-GHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQAR 187 (303)
Q Consensus 109 Wd~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (303)
||.. +.....+. .+...+..+++.++++++++...++.|.+||..... ....... ... .....+.+.+...
T Consensus 105 ~d~~-----g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~-~~~~~~~-~~~-~~p~~i~~~~~g~ 176 (286)
T 1q7f_A 105 YNQY-----GQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNV-LHKFGCS-KHL-EFPNGVVVNDKQE 176 (286)
T ss_dssp ECTT-----SCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCE-EEEEECT-TTC-SSEEEEEECSSSE
T ss_pred ECCC-----CcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCE-EEEeCCC-Ccc-CCcEEEEECCCCC
Confidence 9942 22233332 234567889999999988888889999999964211 0000000 000 0011122222222
Q ss_pred cccCC-CCCcceEEecccceeeeE------EEeeeeeeeCCCeEEEEEeCCC-eEEEEECCCCeEEEEeecCCC--CeEE
Q 022074 188 DLKHP-CDQSVATYKGHSVLRTLI------RCHFSPVYSTGQKYIYTGSHDS-CVYVYDLVSGEQVAALKYHTS--PVRD 257 (303)
Q Consensus 188 ~~~~~-~~~~~~~~~~~~~~~~~~------~~~~~~~~s~~~~~latg~~dg-~i~iwd~~~~~~~~~~~~h~~--~I~~ 257 (303)
.+... ....+..++......... .......++++++++++...++ .|++||. +++.+..+..+.. .+.+
T Consensus 177 l~v~~~~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~ 255 (286)
T 1q7f_A 177 IFISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFD 255 (286)
T ss_dssp EEEEEGGGTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEE
T ss_pred EEEEECCCCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCccee
Confidence 11111 112222222111100000 0112234678888888888776 9999996 5666766665533 4789
Q ss_pred EEECCCCCeEEEEeCCCCEEEeecCC
Q 022074 258 CSWHPSQPMLVSSSWDGDVVRWEFPG 283 (303)
Q Consensus 258 v~~sp~~~~las~s~Dg~i~~Wd~~~ 283 (303)
++++|+++++++ +.|+.|++|+...
T Consensus 256 i~~~~~g~l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 256 VALMDDGSVVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp EEEETTTEEEEE-ETTTEEEEEECSC
T ss_pred EEECCCCcEEEE-CCCCeEEEEEccc
Confidence 999999998887 5799999999753
No 161
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.53 E-value=9e-14 Score=134.47 Aligned_cols=251 Identities=11% Similarity=0.017 Sum_probs=141.3
Q ss_pred hccccccccccCcCcccccCCCccc---ceEEEEEcCCCCEEEEeeC---------CCeEEEEECCCCceEEEEecccCC
Q 022074 16 ESLANVTEIHDGLDFSAADDGGYSF---GIFSLKFSTDGRELVAGSS---------DDCIYVYDLEANKLSLRILAHTSD 83 (303)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~l~~s~~g~~l~sgs~---------Dg~v~lwd~~~~~~~~~~~~h~~~ 83 (303)
+..+.+|+.-+|... ....+|.. .+.+++|||||++|+.++. |++|++||+.+++... ...-...
T Consensus 35 d~~i~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~-~~~l~~~ 111 (719)
T 1z68_A 35 DNNIVLYNIETGQSY--TILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVR-GNELPRP 111 (719)
T ss_dssp TSCEEEEESSSCCEE--EEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC-SSCCCSS
T ss_pred CCCEEEEEcCCCcEE--EEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcccc-ceecCcc
Confidence 455667776555422 12234443 4899999999999999876 7899999999986510 0111356
Q ss_pred eEEEEEccCCCcEEEEecCCCeEEEEcCccccCC-----CccceeecccccC---------eEEEEeCCCCCEEEEEeCC
Q 022074 84 VNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVK-----GKPAGVLMGHLEG---------ITFIDSRGDGRYLISNGKD 149 (303)
Q Consensus 84 v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~-----~~~~~~~~~h~~~---------v~~~~~~~~~~~l~s~~~D 149 (303)
+..++|+| +++.|+.+. ++.|++||+...... +.....+.||.+. ...+.|+|||++|++++.|
T Consensus 112 ~~~~~~SP-DG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d 189 (719)
T 1z68_A 112 IQYLCWSP-VGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFN 189 (719)
T ss_dssp BCCEEECS-STTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEE
T ss_pred cccceECC-CCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEEC
Confidence 88999976 477777775 789999997532110 0000012222221 1478999999999998865
Q ss_pred -CcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEe--cccce-----------eeeEEEeee
Q 022074 150 -QAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYK--GHSVL-----------RTLIRCHFS 215 (303)
Q Consensus 150 -~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-----------~~~~~~~~~ 215 (303)
+.+++|.+...... ...... ...++...... ....+..++ +.... .........
T Consensus 190 ~~~~~~~~~~~~~~~------~~~~~~---~~~yp~~g~~~---~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (719)
T 1z68_A 190 DTDIPVIAYSYYGDE------QYPRTI---NIPYPKAGAKN---PVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSW 257 (719)
T ss_dssp CTTSCEEEEEECCSS------SSCEEE---EEECCBTTSCC---CEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEE
T ss_pred CCCCceEEeeccCCC------CCccce---eecCCCCCCCC---CeeEEEEEECCCCCccceeEccCCccCCCCcceEEE
Confidence 55666654321110 000000 01111111000 000011111 00000 000112235
Q ss_pred eeeeCCCeEEEEEeCC----CeEEEEE----CCCCeEEEEe----ecCCCCeE-----EEEECCCCCeEE--EEeCCCC-
Q 022074 216 PVYSTGQKYIYTGSHD----SCVYVYD----LVSGEQVAAL----KYHTSPVR-----DCSWHPSQPMLV--SSSWDGD- 275 (303)
Q Consensus 216 ~~~s~~~~~latg~~d----g~i~iwd----~~~~~~~~~~----~~h~~~I~-----~v~~sp~~~~la--s~s~Dg~- 275 (303)
+.||||++++++.... ..|++|| ..+++....+ ..|...+. .++|||||+.|+ ++..+|.
T Consensus 258 ~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~ 337 (719)
T 1z68_A 258 LTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYK 337 (719)
T ss_dssp EEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCE
T ss_pred eEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCce
Confidence 6688998887775432 3489999 8777654444 46777777 899999999554 4556665
Q ss_pred -EEEeecCC
Q 022074 276 -VVRWEFPG 283 (303)
Q Consensus 276 -i~~Wd~~~ 283 (303)
|.+|++.+
T Consensus 338 ~l~~~~~~~ 346 (719)
T 1z68_A 338 HIHYIKDTV 346 (719)
T ss_dssp EEEEESSCS
T ss_pred EEEEEECCC
Confidence 55556543
No 162
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.53 E-value=7.9e-13 Score=126.56 Aligned_cols=206 Identities=10% Similarity=-0.003 Sum_probs=135.9
Q ss_pred CCcccceEEEEEcCCCCEEEEe--eCCCeEEEEECCCCceEEEEecccCCeE---------EEEEcc-CCCcE-EE-Eec
Q 022074 36 GGYSFGIFSLKFSTDGRELVAG--SSDDCIYVYDLEANKLSLRILAHTSDVN---------TVCFGD-ESGHL-IY-SGS 101 (303)
Q Consensus 36 ~~~~~~v~~l~~s~~g~~l~sg--s~Dg~v~lwd~~~~~~~~~~~~h~~~v~---------~l~~~~-~~~~~-l~-s~s 101 (303)
.+|...+..++|++++-++++. +.++...||....+....++..|...+. ...|+. ++++. |+ +..
T Consensus 20 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~ 99 (662)
T 3azo_A 20 ASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHF 99 (662)
T ss_dssp HHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBT
T ss_pred hhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEEC
Confidence 5788889999999886666666 5688999998655555566767766655 666751 34555 44 444
Q ss_pred CCCeEEEEcCccccCCC-ccceeecc-----cccCeEEEEeCCCCCEEEEEeCC----------CcEEEEEcccccCC--
Q 022074 102 DDNLCKVWDRRCLNVKG-KPAGVLMG-----HLEGITFIDSRGDGRYLISNGKD----------QAIKLWDIRKMSSN-- 163 (303)
Q Consensus 102 ~dg~v~lWd~~~~~~~~-~~~~~~~~-----h~~~v~~~~~~~~~~~l~s~~~D----------~~v~lWdl~~~~~~-- 163 (303)
.+..|.+|++.. .+ .....+.. |...+..++|+|||+.|+.++.| ..|++||+......
T Consensus 100 ~~~~l~~~~~~~---~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 176 (662)
T 3azo_A 100 GDQRLYAFEPDA---PGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADR 176 (662)
T ss_dssp TTCCEEEECTTS---TTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCG
T ss_pred CCCeEEEEcCCC---CCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccC
Confidence 466777777530 01 12233334 56678889999999999988877 57888887531000
Q ss_pred cccccCccceeeeceeeeCCCCCccccCCCCCcceEEe-cccceeeeEEEeeeeeeeCCCeEEEEEeCC--------CeE
Q 022074 164 ASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYK-GHSVLRTLIRCHFSPVYSTGQKYIYTGSHD--------SCV 234 (303)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~~~latg~~d--------g~i 234 (303)
... ..+. .+. .....+.+||||++|+.++.+ ..|
T Consensus 177 ~~~-------------------------------~~l~~~~~------~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i 219 (662)
T 3azo_A 177 SAV-------------------------------RELSDDAH------RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTEL 219 (662)
T ss_dssp GGS-------------------------------EESSCSCS------SEECCCEECTTSSEEEEEEECTTCCTTTCEEE
T ss_pred Cce-------------------------------eEEEecCC------CcccCceECCCCCEEEEEECCCCCCCCCCcEE
Confidence 000 0000 000 012346689999999988755 379
Q ss_pred EEEECC-CC---eEEEEeecCCCCeEEEEECCCCCeEEEEeCCCCEEEeec
Q 022074 235 YVYDLV-SG---EQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEF 281 (303)
Q Consensus 235 ~iwd~~-~~---~~~~~~~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~ 281 (303)
++||+. ++ +.......|...+..++|||||+++++++.|+..++|.+
T Consensus 220 ~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~ 270 (662)
T 3azo_A 220 KTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRV 270 (662)
T ss_dssp EEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEE
T ss_pred EEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEE
Confidence 999998 57 444444556788999999999999899988984444443
No 163
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.52 E-value=7.5e-12 Score=111.51 Aligned_cols=263 Identities=11% Similarity=0.060 Sum_probs=154.5
Q ss_pred EEEEEccCchh-hccccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEee----------CCCeEEEEECCCCce
Q 022074 5 VHIVDVGSGTM-ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS----------SDDCIYVYDLEANKL 73 (303)
Q Consensus 5 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs----------~Dg~v~lwd~~~~~~ 73 (303)
+-..+.|+..+ |..+.|++.-+|.-. ...+.| ..+ .++|+|||+++++++ .+++|.+||+.+.+.
T Consensus 18 ~yv~~~~~~~~~d~~v~v~D~~t~~~~-~~i~~g-~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~ 93 (361)
T 2oiz_A 18 IYVMDSVFMHLTESRVHVYDYTNGKFL-GMVPTA-FNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTF 93 (361)
T ss_dssp EEEEECCGGGGGGCEEEEEETTTCCEE-EEEECC-EEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCE
T ss_pred EEEECCCCCccccCeEEEEECCCCeEE-EEecCC-CCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcE
Confidence 45566666544 677888886565422 223233 344 899999999999986 367899999998887
Q ss_pred EEEEecc------cCCeEEEEEccCCCcEEEEecC--CCeEEEEcCccccCCCcccee-ecccccCeEEEEeCCCC-CEE
Q 022074 74 SLRILAH------TSDVNTVCFGDESGHLIYSGSD--DNLCKVWDRRCLNVKGKPAGV-LMGHLEGITFIDSRGDG-RYL 143 (303)
Q Consensus 74 ~~~~~~h------~~~v~~l~~~~~~~~~l~s~s~--dg~v~lWd~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~-~~l 143 (303)
..++... ......+++++ ++++|+++.. +++|.+||+.. .+.... +. . .....+.+.|++ ..+
T Consensus 94 ~~~i~~~~~~~~~g~~p~~i~~sp-dg~~l~v~n~~~~~~v~v~d~~~----~~~~~~~i~-~-~~~~~v~~~p~~~~~~ 166 (361)
T 2oiz_A 94 EKEISLPPKRVQGLNYDGLFRQTT-DGKFIVLQNASPATSIGIVDVAK----GDYVEDVTA-A-AGCWSVIPQPNRPRSF 166 (361)
T ss_dssp EEEEEECTTBCCBCCCGGGEEECT-TSSEEEEEEESSSEEEEEEETTT----TEEEEEEGG-G-TTEEEEEECTTSSSEE
T ss_pred EEEEEcCccccccCCCcceEEECC-CCCEEEEECCCCCCeEEEEECCC----CcEEEEEec-C-CCcceeEEcCCCCeeE
Confidence 6665432 23567888975 5777777753 67999999863 223333 21 1 122223445554 678
Q ss_pred EEEeCCCcEEEEEcccccCCc-ccccCccceeeec----eeeeCCCCCcc-ccCCCCCcceEEecccceeee--------
Q 022074 144 ISNGKDQAIKLWDIRKMSSNA-SCNLGFRSYEWDY----RWMDYPPQARD-LKHPCDQSVATYKGHSVLRTL-------- 209 (303)
Q Consensus 144 ~s~~~D~~v~lWdl~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------- 209 (303)
++.+.|+.+.+|++....... .... ...++. ......++... +.......+..++-.......
T Consensus 167 ~~~~~dg~~~~v~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~ 243 (361)
T 2oiz_A 167 MTICGDGGLLTINLGEDGKVASQSRS---KQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLN 243 (361)
T ss_dssp EEEETTSSEEEEEECTTSSEEEEEEC---CCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCC
T ss_pred EEECCCCcEEEEEECCCCcEeeeccc---cceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccC
Confidence 888999999999875311100 0000 000000 00000000000 000001111111110000000
Q ss_pred ---------EEEeeeeeeeCCCeEEEEEeC-----------CCeEEEEECCCCeEEEEeecCCCCeEEEEECCCCCeEEE
Q 022074 210 ---------IRCHFSPVYSTGQKYIYTGSH-----------DSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVS 269 (303)
Q Consensus 210 ---------~~~~~~~~~s~~~~~latg~~-----------dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~~las 269 (303)
........++++++.++.+.+ ++.|.+||..+++.+.++..+. +.+++|+||+++|++
T Consensus 244 ~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v 321 (361)
T 2oiz_A 244 DEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLT 321 (361)
T ss_dssp HHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEE
T ss_pred ccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEE
Confidence 000001246788776666543 3589999999999999998877 899999999999998
Q ss_pred EeCCCCEEEeecCCC
Q 022074 270 SSWDGDVVRWEFPGN 284 (303)
Q Consensus 270 ~s~Dg~i~~Wd~~~~ 284 (303)
++. +++.+||.+..
T Consensus 322 ~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 322 LDG-GNVNVYDISQP 335 (361)
T ss_dssp ECS-SCEEEEECSSS
T ss_pred eCC-CeEEEEECCCC
Confidence 887 99999997653
No 164
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.52 E-value=2.5e-12 Score=112.87 Aligned_cols=205 Identities=13% Similarity=0.134 Sum_probs=141.0
Q ss_pred CcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCc-eEEEE---------ecccCCeEEEEEccCCCcEEEEec-CCCe
Q 022074 37 GYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANK-LSLRI---------LAHTSDVNTVCFGDESGHLIYSGS-DDNL 105 (303)
Q Consensus 37 ~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~-~~~~~---------~~h~~~v~~l~~~~~~~~~l~s~s-~dg~ 105 (303)
++-.....++++++|+.+++...++.|++||..... ....+ ..+......+++.+++++++++.+ .++.
T Consensus 88 ~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~ 167 (329)
T 3fvz_A 88 NLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSR 167 (329)
T ss_dssp TTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCE
T ss_pred CccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCe
Confidence 444578899999999988888889999999986552 23333 233346889999765688888886 6999
Q ss_pred EEEEcCccccCCCccceeec----------ccccCeEEEEeCCC-CCEEEEEeCCCcEEEEEcccccCCcccccCcccee
Q 022074 106 CKVWDRRCLNVKGKPAGVLM----------GHLEGITFIDSRGD-GRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYE 174 (303)
Q Consensus 106 v~lWd~~~~~~~~~~~~~~~----------~h~~~v~~~~~~~~-~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~ 174 (303)
|++||.. +.....+. ++......++++++ +.++++...++.|++||..........
T Consensus 168 I~~~~~~-----g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~-------- 234 (329)
T 3fvz_A 168 IVQFSPS-----GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREI-------- 234 (329)
T ss_dssp EEEECTT-----SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEE--------
T ss_pred EEEEcCC-----CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEE--------
Confidence 9999943 22232232 22234778899998 788888889999999997622111000
Q ss_pred eeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeC------CCeEEEEEeCCCeEEEEECCCCeEEEEe
Q 022074 175 WDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYST------GQKYIYTGSHDSCVYVYDLVSGEQVAAL 248 (303)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~------~~~~latg~~dg~i~iwd~~~~~~~~~~ 248 (303)
..+.. ..... ...++| ++...++...+..|++||..+++.+..+
T Consensus 235 ------~~~~~--------~~~~~----------------~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~ 284 (329)
T 3fvz_A 235 ------KHASF--------GRNVF----------------AISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVF 284 (329)
T ss_dssp ------CCTTT--------TTCEE----------------EEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEE
T ss_pred ------ecccc--------CCCcc----------------eeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEE
Confidence 00000 00000 011222 3344444555679999999999988887
Q ss_pred e---cCCCCeEEEEECCCCCeEEEEeCCCCEEEeecCCC
Q 022074 249 K---YHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 249 ~---~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~~ 284 (303)
. .+...+.+++++|+|.++++...++.|++|++.+.
T Consensus 285 ~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 285 KPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp CCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEEC
T ss_pred cCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCcc
Confidence 3 66778999999999999999999999999998653
No 165
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.51 E-value=9e-13 Score=117.55 Aligned_cols=193 Identities=13% Similarity=0.110 Sum_probs=121.5
Q ss_pred EEEcCCCCEEEEeeC-CC--eEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCccc
Q 022074 45 LKFSTDGRELVAGSS-DD--CIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPA 121 (303)
Q Consensus 45 l~~s~~g~~l~sgs~-Dg--~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~ 121 (303)
.+|+|||++|+.++. ++ .|.+||+.+++.......+...+..++|+| +++.|+.++.++.|++||+.. ++..
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~sp-dg~~l~~~~~~~~l~~~d~~~----g~~~ 115 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSP-DDDALFYVKDGRNLMRVDLAT----LEEN 115 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECT-TSSEEEEEETTTEEEEEETTT----CCEE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcC-CCCEEEEEeCCCeEEEEECCC----Ccce
Confidence 789999999999887 67 488889998876544444555555678975 578888888899999999763 2223
Q ss_pred eeecccccCeEE--EEeCCCCCEEEEEe----------------------CCCcEEEEEcccccCCcccccCccceeeec
Q 022074 122 GVLMGHLEGITF--IDSRGDGRYLISNG----------------------KDQAIKLWDIRKMSSNASCNLGFRSYEWDY 177 (303)
Q Consensus 122 ~~~~~h~~~v~~--~~~~~~~~~l~s~~----------------------~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~ 177 (303)
..+..+...+.. ..+++++.+++... .+..|.+||+....
T Consensus 116 ~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~---------------- 179 (388)
T 3pe7_A 116 VVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE---------------- 179 (388)
T ss_dssp EEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC----------------
T ss_pred eeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCc----------------
Confidence 233333333322 23478888876422 22444555543210
Q ss_pred eeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeC-CCeEEEEEeCC------CeEEEEECCCCeEEEEeec
Q 022074 178 RWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYST-GQKYIYTGSHD------SCVYVYDLVSGEQVAALKY 250 (303)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~latg~~d------g~i~iwd~~~~~~~~~~~~ 250 (303)
...+..+.. ....+.++| +++.|+....+ ..|+++|...++. ..+..
T Consensus 180 -------------------~~~l~~~~~------~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~ 233 (388)
T 3pe7_A 180 -------------------STVILQENQ------WLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKT 233 (388)
T ss_dssp -------------------EEEEEEESS------CEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCC
T ss_pred -------------------eEEeecCCc------cccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeee
Confidence 001110100 112456889 89988877653 3788889876543 34433
Q ss_pred CC--CCeEEEEECCCCCeEEEEeC-CC----CEEEeecCCC
Q 022074 251 HT--SPVRDCSWHPSQPMLVSSSW-DG----DVVRWEFPGN 284 (303)
Q Consensus 251 h~--~~I~~v~~sp~~~~las~s~-Dg----~i~~Wd~~~~ 284 (303)
+. ..+...+|||||+.|+..+. ++ .|.+||+.+.
T Consensus 234 ~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g 274 (388)
T 3pe7_A 234 HAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETL 274 (388)
T ss_dssp CCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTC
T ss_pred CCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCC
Confidence 43 35888999999997765443 22 2999998754
No 166
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.50 E-value=1.3e-11 Score=108.34 Aligned_cols=208 Identities=12% Similarity=0.074 Sum_probs=139.6
Q ss_pred ceEEEEEcCCCCEEEEeeCC------------------------CeEEEEECCCCceEEEEe-cccCCeEEEEEccCCCc
Q 022074 41 GIFSLKFSTDGRELVAGSSD------------------------DCIYVYDLEANKLSLRIL-AHTSDVNTVCFGDESGH 95 (303)
Q Consensus 41 ~v~~l~~s~~g~~l~sgs~D------------------------g~v~lwd~~~~~~~~~~~-~h~~~v~~l~~~~~~~~ 95 (303)
.+.+|+++++|+.+++.+.+ ++|.+||..+++....+. .+......+++.+ +++
T Consensus 25 ~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~-~g~ 103 (329)
T 3fvz_A 25 QVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDT-DGN 103 (329)
T ss_dssp CEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECT-TSC
T ss_pred CceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECC-CCC
Confidence 48999999999988888777 479999999888765443 3445788999964 577
Q ss_pred EEEEecCCCeEEEEcCccccCCCccceee---------cccccCeEEEEeCC-CCCEEEEEe-CCCcEEEEEcccccCCc
Q 022074 96 LIYSGSDDNLCKVWDRRCLNVKGKPAGVL---------MGHLEGITFIDSRG-DGRYLISNG-KDQAIKLWDIRKMSSNA 164 (303)
Q Consensus 96 ~l~s~s~dg~v~lWd~~~~~~~~~~~~~~---------~~h~~~v~~~~~~~-~~~~l~s~~-~D~~v~lWdl~~~~~~~ 164 (303)
++++...++.|++||..... .....+ .++......+++++ ++.++++.+ .++.|++||.... ..
T Consensus 104 l~v~d~~~~~v~~~~~~g~~---~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~-~~- 178 (329)
T 3fvz_A 104 YWVTDVALHQVFKLDPHSKE---GPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGK-FV- 178 (329)
T ss_dssp EEEEETTTTEEEEECTTCSS---CCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSC-EE-
T ss_pred EEEEECCCCEEEEEeCCCCe---EEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCC-EE-
Confidence 88888889999999964210 022222 23445678899999 788888887 6999999984311 00
Q ss_pred ccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCC-CeEEEEEeCCCeEEEEECCCCe
Q 022074 165 SCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTG-QKYIYTGSHDSCVYVYDLVSGE 243 (303)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-~~~latg~~dg~i~iwd~~~~~ 243 (303)
...+. .. ... .. ... .........++++ +.++++...+++|++||..+++
T Consensus 179 -~~~~~-----------~g-~~~---~~---~~~----------~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~ 229 (329)
T 3fvz_A 179 -TQWGE-----------ES-SGS---SP---RPG----------QFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKE 229 (329)
T ss_dssp -EEECE-----------EC-CSS---SC---CTT----------EESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCC
T ss_pred -EEecc-----------CC-CCC---CC---CCc----------ccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCc
Confidence 00000 00 000 00 000 0001112346677 8888888899999999999899
Q ss_pred EEEEee--cCCCCeEEEEECC------CCCeEEEEeCCCCEEEeecCC
Q 022074 244 QVAALK--YHTSPVRDCSWHP------SQPMLVSSSWDGDVVRWEFPG 283 (303)
Q Consensus 244 ~~~~~~--~h~~~I~~v~~sp------~~~~las~s~Dg~i~~Wd~~~ 283 (303)
.+..+. .+...+.+++|+| +++.+++...+..+++|+...
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~ 277 (329)
T 3fvz_A 230 FVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSS 277 (329)
T ss_dssp EEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTT
T ss_pred EEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCC
Confidence 888774 4567889999999 444444444556899999653
No 167
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.45 E-value=9.1e-12 Score=110.98 Aligned_cols=239 Identities=11% Similarity=0.038 Sum_probs=140.3
Q ss_pred CCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEE-ccCCCcEEEE---------------
Q 022074 36 GGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCF-GDESGHLIYS--------------- 99 (303)
Q Consensus 36 ~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~-~~~~~~~l~s--------------- 99 (303)
.+|...+..+.|+|||+.|+.++.++.|++||+.+++.......+...+....| ..++++.++.
T Consensus 77 ~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~ 156 (388)
T 3pe7_A 77 EGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWK 156 (388)
T ss_dssp CSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHH
T ss_pred eCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccc
Confidence 455555667789999999999999999999999998866555555554444433 1345666653
Q ss_pred -------ecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCC-CCCEEEEEeCC------CcEEEEEcccccCCcc
Q 022074 100 -------GSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRG-DGRYLISNGKD------QAIKLWDIRKMSSNAS 165 (303)
Q Consensus 100 -------~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~D------~~v~lWdl~~~~~~~~ 165 (303)
...+..|.+||+.. +. ...+..+...+..+.++| +|+.|+..+.+ ..|.++|+........
T Consensus 157 ~~~~~~~~~~~~~l~~~d~~~----g~-~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l 231 (388)
T 3pe7_A 157 KFHEFYFTKPCCRLMRVDLKT----GE-STVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKV 231 (388)
T ss_dssp HHHHHGGGCCCEEEEEEETTT----CC-EEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEES
T ss_pred hhhhhhccCCcceEEEEECCC----Cc-eEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEe
Confidence 23457888999752 22 334445666788899999 99988877653 3666666543211100
Q ss_pred cccCccceeeeceeeeCCCCCccccCCC---CC---cceEEeccccee-eeEE------E---eeeeeeeCCCeEEEEE-
Q 022074 166 CNLGFRSYEWDYRWMDYPPQARDLKHPC---DQ---SVATYKGHSVLR-TLIR------C---HFSPVYSTGQKYIYTG- 228 (303)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~~-~~~~------~---~~~~~~s~~~~~latg- 228 (303)
... .. ........+.|+.+.+.... .. .+..++-..... .+.. . .....|+|+|+.|+..
T Consensus 232 ~~~--~~-~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 308 (388)
T 3pe7_A 232 KTH--AE-GESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDV 308 (388)
T ss_dssp CCC--CT-TEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC----
T ss_pred eeC--CC-CcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEe
Confidence 000 00 00111223455554332211 00 122222111100 0100 0 0112478888887753
Q ss_pred --------eCCCeEEEEECCCCeEEEEeecCCC-----------CeEEEEECCCCCeEEEEe-CCCCEEEeecCC
Q 022074 229 --------SHDSCVYVYDLVSGEQVAALKYHTS-----------PVRDCSWHPSQPMLVSSS-WDGDVVRWEFPG 283 (303)
Q Consensus 229 --------~~dg~i~iwd~~~~~~~~~~~~h~~-----------~I~~v~~sp~~~~las~s-~Dg~i~~Wd~~~ 283 (303)
..+..|++||+.+++. ..+..|.. .+.+++|||||+.|+.++ .+|...+|.+..
T Consensus 309 ~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l 382 (388)
T 3pe7_A 309 QDDSGYKIENDPFLYVFNMKNGTQ-HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATL 382 (388)
T ss_dssp --------CCCCEEEEEETTTTEE-EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEEC
T ss_pred eeccccccCCCCEEEEEeccCCce-EEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEEC
Confidence 5567999999988775 44555655 578899999998766554 578888887653
No 168
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.45 E-value=1.9e-12 Score=124.00 Aligned_cols=223 Identities=9% Similarity=-0.013 Sum_probs=138.2
Q ss_pred cccccccccCcCcccccCCCcccceE---------EEEEc--CCCCE-EEEeeC-CCeEEEEECC--C-CceEEEEec--
Q 022074 18 LANVTEIHDGLDFSAADDGGYSFGIF---------SLKFS--TDGRE-LVAGSS-DDCIYVYDLE--A-NKLSLRILA-- 79 (303)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~v~---------~l~~s--~~g~~-l~sgs~-Dg~v~lwd~~--~-~~~~~~~~~-- 79 (303)
-..+|...+|.+. ....+|...+. +..|+ |||+. |+.++. +..|+++++. + +. ..++..
T Consensus 48 ~~~l~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~ 124 (662)
T 3azo_A 48 RATLVRRRADGAE--ESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVS 124 (662)
T ss_dssp EEEEEEECTTSCE--EESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECSCCC
T ss_pred cEEEEEECCCCCc--ceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEeccCCc
Confidence 3455555444432 22344544444 55555 99998 666543 5567777765 3 43 344555
Q ss_pred ---ccCCeEEEEEccCCCcEEEEecCC----------CeEEEEcCccccC-CCccceeec-ccccCeEEEEeCCCCCEEE
Q 022074 80 ---HTSDVNTVCFGDESGHLIYSGSDD----------NLCKVWDRRCLNV-KGKPAGVLM-GHLEGITFIDSRGDGRYLI 144 (303)
Q Consensus 80 ---h~~~v~~l~~~~~~~~~l~s~s~d----------g~v~lWd~~~~~~-~~~~~~~~~-~h~~~v~~~~~~~~~~~l~ 144 (303)
|...+..++|+| +++.|++++.+ .+|++||+..... .......+. .+...+..++++|||++|+
T Consensus 125 ~~~~~~~~~~~~~sp-Dg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la 203 (662)
T 3azo_A 125 AVGGGLRWADPVLLP-ERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAV 203 (662)
T ss_dssp CSTTCEEEEEEEEET-TTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEE
T ss_pred cCCCCccccCcEECC-CCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEE
Confidence 566788999976 47788877766 5899999753100 001223444 4556677788999999998
Q ss_pred EEeCCC--------cEEEEEccc-ccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeee
Q 022074 145 SNGKDQ--------AIKLWDIRK-MSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFS 215 (303)
Q Consensus 145 s~~~D~--------~v~lWdl~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (303)
..+.++ .|++||+.. .... . ......++. .....
T Consensus 204 ~~~~~~~~~~~~~~~i~~~d~~~~g~~~-~------------------------------~~~l~~~~~------~~~~~ 246 (662)
T 3azo_A 204 WLAWDHPRMPWEGTELKTARVTEDGRFA-D------------------------------TRTLLGGPE------EAIAQ 246 (662)
T ss_dssp EEEECTTCCTTTCEEEEEEEECTTSCEE-E------------------------------EEEEEEETT------BCEEE
T ss_pred EEECCCCCCCCCCcEEEEEEECCCCccc-c------------------------------cEEeCCCCC------ceEcc
Confidence 877553 688888752 1000 0 000011110 01134
Q ss_pred eeeeCCCeEEEEEeCCC--eEEEEECCCCeEEEEeecCCCC--------eEEEEECCCCCeEEEEeCCCCEEEeecC
Q 022074 216 PVYSTGQKYIYTGSHDS--CVYVYDLVSGEQVAALKYHTSP--------VRDCSWHPSQPMLVSSSWDGDVVRWEFP 282 (303)
Q Consensus 216 ~~~s~~~~~latg~~dg--~i~iwd~~~~~~~~~~~~h~~~--------I~~v~~sp~~~~las~s~Dg~i~~Wd~~ 282 (303)
+.|+||++++++++.++ .|++||..+++.......+... +..++|+|+++++++++. +..++|.+.
T Consensus 247 ~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d 322 (662)
T 3azo_A 247 AEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILD 322 (662)
T ss_dssp EEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEE
T ss_pred eEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEE
Confidence 66889999888888888 7777777677654333333222 568999999999999999 999999543
No 169
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.45 E-value=1.3e-12 Score=126.98 Aligned_cols=257 Identities=12% Similarity=0.025 Sum_probs=144.9
Q ss_pred hccccccccccCcCcccccCCCcc-----cceEEEEEcCCCCEEEEeeCC---------CeEEEEECCCCceEEEEeccc
Q 022074 16 ESLANVTEIHDGLDFSAADDGGYS-----FGIFSLKFSTDGRELVAGSSD---------DCIYVYDLEANKLSLRILAHT 81 (303)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~l~~s~~g~~l~sgs~D---------g~v~lwd~~~~~~~~~~~~h~ 81 (303)
+..+.+|+.-+|.... -..+|. .....++|||||++|+.++.+ +.+.+||+.+++.. ++..|.
T Consensus 35 ~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~ 111 (740)
T 4a5s_A 35 ENNILVFNAEYGNSSV--FLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIP 111 (740)
T ss_dssp TTEEEEEETTTCCEEE--EECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCC
T ss_pred CCcEEEEECCCCceEE--EEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCC
Confidence 4556677776665321 123343 234558899999999999876 55679999998753 466677
Q ss_pred CCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCC-----Cccceeecccc---------cCeEEEEeCCCCCEEEEEe
Q 022074 82 SDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVK-----GKPAGVLMGHL---------EGITFIDSRGDGRYLISNG 147 (303)
Q Consensus 82 ~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~-----~~~~~~~~~h~---------~~v~~~~~~~~~~~l~s~~ 147 (303)
..+...+|+|+ ++.|+.+. |+.|++||+...... +.....+.++. .....+.|+|||++|+..+
T Consensus 112 ~~~~~~~~SPd-G~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~ 189 (740)
T 4a5s_A 112 NNTQWVTWSPV-GHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQ 189 (740)
T ss_dssp TTEEEEEECSS-TTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEE
T ss_pred CcceeeEECCC-CCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEE
Confidence 88999999864 77777664 689999997532110 00001122222 1123478999999999887
Q ss_pred CCCc-EEEEEcccccCCcccccCccceeeeceeeeCCCCCcc-----c--cCCCC---C---cceEEecccceeeeEEEe
Q 022074 148 KDQA-IKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARD-----L--KHPCD---Q---SVATYKGHSVLRTLIRCH 213 (303)
Q Consensus 148 ~D~~-v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~--~~~~~---~---~~~~~~~~~~~~~~~~~~ 213 (303)
.|.+ +++|++....... ...... ....++..+.. + ..... . ....+..-..........
T Consensus 190 ~d~~~v~~~~~~~~~~~~----~~~~~~---~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 262 (740)
T 4a5s_A 190 FNDTEVPLIEYSFYSDES----LQYPKT---VRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYL 262 (740)
T ss_dssp EECTTCCEEEEEECCSTT----CSSCEE---EEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEE
T ss_pred EcccCCceEEEEeecCCC----CCCCcc---eeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEE
Confidence 6554 9999875321110 000000 11112211110 0 00000 0 011111000000001123
Q ss_pred eeeeeeCCCeEEEEEe----CCCeEEEEECCCCe----E--EEEe--ecCCCCeE-----EEEECCCCCeEE-EEeC-C-
Q 022074 214 FSPVYSTGQKYIYTGS----HDSCVYVYDLVSGE----Q--VAAL--KYHTSPVR-----DCSWHPSQPMLV-SSSW-D- 273 (303)
Q Consensus 214 ~~~~~s~~~~~latg~----~dg~i~iwd~~~~~----~--~~~~--~~h~~~I~-----~v~~sp~~~~la-s~s~-D- 273 (303)
..+.||||+++++... .+..|++||+.+++ + +..+ +.|...|. ..+|||||+.|+ ..++ +
T Consensus 263 ~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G 342 (740)
T 4a5s_A 263 CDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEG 342 (740)
T ss_dssp EEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTS
T ss_pred EEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCC
Confidence 3567889999766653 34479999998886 2 1112 45666665 789999999776 6654 3
Q ss_pred -CCEEEeecCCC
Q 022074 274 -GDVVRWEFPGN 284 (303)
Q Consensus 274 -g~i~~Wd~~~~ 284 (303)
..|.+|+..+.
T Consensus 343 ~~~l~~~~~~~~ 354 (740)
T 4a5s_A 343 YRHICYFQIDKK 354 (740)
T ss_dssp CEEEEEEETTCS
T ss_pred ceEEEEEECCCC
Confidence 45677776543
No 170
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.43 E-value=2.2e-11 Score=117.89 Aligned_cols=207 Identities=11% Similarity=0.031 Sum_probs=128.8
Q ss_pred CcccceEEEEEcCCCCEEEEeeCCC-----eEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCe------
Q 022074 37 GYSFGIFSLKFSTDGRELVAGSSDD-----CIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNL------ 105 (303)
Q Consensus 37 ~~~~~v~~l~~s~~g~~l~sgs~Dg-----~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~------ 105 (303)
+|+..+.+++|||||++|+.++.++ +|++||+.+++.......+ ..+..++|+| +++.|+.++.++.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wsp-Dg~~l~~~~~~~~~~~~~~ 199 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTH-DGKGMFYNAYPQQDGKSDG 199 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECT-TSSEEEEEECCCCSSCCSS
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEe-CCCEEEEEEECCccccccc
Confidence 5667899999999999998776543 8999999999765432222 2367889976 4677777776655
Q ss_pred ----------EEEEcCccccCCCccceeecc--cccCeEEEEeCCCCCEEEEEeC-----CCcEEEEEcccccCCccccc
Q 022074 106 ----------CKVWDRRCLNVKGKPAGVLMG--HLEGITFIDSRGDGRYLISNGK-----DQAIKLWDIRKMSSNASCNL 168 (303)
Q Consensus 106 ----------v~lWd~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~~~-----D~~v~lWdl~~~~~~~~~~~ 168 (303)
|++|++..... .....+.. |...+..+.++++|++|+..+. +..|.+||+...........
T Consensus 200 ~~~~~~~~~~v~~~~l~t~~~--~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~ 277 (710)
T 2xdw_A 200 TETSTNLHQKLYYHVLGTDQS--EDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGIL 277 (710)
T ss_dssp SCCCCCCCCEEEEEETTSCGG--GCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC
T ss_pred cccccCCCCEEEEEECCCCcc--cceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCcc
Confidence 99999753211 11122222 3445778899999999887764 56888998764100000000
Q ss_pred CccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeC----CCeEEEEECCCCeE
Q 022074 169 GFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSH----DSCVYVYDLVSGEQ 244 (303)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~----dg~i~iwd~~~~~~ 244 (303)
....+..+.... . ..++++++.|+..+. .+.|.+||+.+++.
T Consensus 278 ---------------------------~~~~l~~~~~~~---~----~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~ 323 (710)
T 2xdw_A 278 ---------------------------KWVKLIDNFEGE---Y----DYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEE 323 (710)
T ss_dssp ---------------------------CCEEEECSSSSC---E----EEEEEETTEEEEEECTTCTTCEEEEEETTSCCG
T ss_pred ---------------------------ceEEeeCCCCcE---E----EEEeccCCEEEEEECCCCCCCEEEEEeCCCCCc
Confidence 000011110000 0 113455665555443 34699999987641
Q ss_pred --EEEeecCCC--CeEEEEECCCCCeEEEEeCCCCEE--Eeec
Q 022074 245 --VAALKYHTS--PVRDCSWHPSQPMLVSSSWDGDVV--RWEF 281 (303)
Q Consensus 245 --~~~~~~h~~--~I~~v~~sp~~~~las~s~Dg~i~--~Wd~ 281 (303)
...+..|.. .+.+++|++++.++++...|+..+ +|++
T Consensus 324 ~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~ 366 (710)
T 2xdw_A 324 SKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDL 366 (710)
T ss_dssp GGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEET
T ss_pred ccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEEC
Confidence 234444543 688999998888999999998654 5555
No 171
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.41 E-value=4.6e-11 Score=105.67 Aligned_cols=185 Identities=12% Similarity=0.179 Sum_probs=113.8
Q ss_pred ccceEEEEEcCCCCEEEEee-CCCeEEEEECCCCc-------eE------EEEecccCCeEEEEEccCCCcEEEEec-CC
Q 022074 39 SFGIFSLKFSTDGRELVAGS-SDDCIYVYDLEANK-------LS------LRILAHTSDVNTVCFGDESGHLIYSGS-DD 103 (303)
Q Consensus 39 ~~~v~~l~~s~~g~~l~sgs-~Dg~v~lwd~~~~~-------~~------~~~~~h~~~v~~l~~~~~~~~~l~s~s-~d 103 (303)
...+.+++|+|+|+++++++ .++.|++|++.... +. .....+......++|+|+ ++.++.++ .+
T Consensus 154 ~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spd-g~~l~v~~~~~ 232 (361)
T 3scy_A 154 MPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSD-GKFAYLINEIG 232 (361)
T ss_dssp SCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTT-SSEEEEEETTT
T ss_pred CCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCC-CCEEEEEcCCC
Confidence 34568899999999776655 48899999887543 21 122344557789999764 66555554 78
Q ss_pred CeEEEEcCccccCCC-ccceeecccccCeEEEEeCCCCCEEEEEeC--CCcEEEEEcccccCCcccccCccceeeeceee
Q 022074 104 NLCKVWDRRCLNVKG-KPAGVLMGHLEGITFIDSRGDGRYLISNGK--DQAIKLWDIRKMSSNASCNLGFRSYEWDYRWM 180 (303)
Q Consensus 104 g~v~lWd~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~--D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~ 180 (303)
+.|.+||+....... ........+......+.++|+|++|++++. ++.|.+|++........
T Consensus 233 ~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~--------------- 297 (361)
T 3scy_A 233 GTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLT--------------- 297 (361)
T ss_dssp CEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEE---------------
T ss_pred CeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEE---------------
Confidence 999999975221100 001112233345678999999998876665 48999999852110000
Q ss_pred eCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEe-CCCeEEEE--ECCCCeEEEEe-ecCCCCeE
Q 022074 181 DYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGS-HDSCVYVY--DLVSGEQVAAL-KYHTSPVR 256 (303)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~-~dg~i~iw--d~~~~~~~~~~-~~h~~~I~ 256 (303)
.+..+.... ......|+|++++|++++ .++.|.+| |..+++..... ..+...+.
T Consensus 298 ---------------~~~~~~~g~-------~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~ 355 (361)
T 3scy_A 298 ---------------KVGYQLTGI-------HPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPV 355 (361)
T ss_dssp ---------------EEEEEECSS-------CCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEE
T ss_pred ---------------EeeEecCCC-------CCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCe
Confidence 000000000 001234789999888887 67999996 44567654332 23445788
Q ss_pred EEEEC
Q 022074 257 DCSWH 261 (303)
Q Consensus 257 ~v~~s 261 (303)
|++|.
T Consensus 356 ~v~~~ 360 (361)
T 3scy_A 356 CLKFV 360 (361)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 99885
No 172
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.41 E-value=2.9e-11 Score=105.64 Aligned_cols=139 Identities=15% Similarity=0.166 Sum_probs=91.3
Q ss_pred hhccccccccccCcCcccccCCCcccceEEEEEcCCCCEEE-EeeCCCeEEEEECCCCceEEEEeccc------CCeEEE
Q 022074 15 MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELV-AGSSDDCIYVYDLEANKLSLRILAHT------SDVNTV 87 (303)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~-sgs~Dg~v~lwd~~~~~~~~~~~~h~------~~v~~l 87 (303)
.+..+.||+.-+|... .....+....+..++|+|+|++++ ++..++.|.+||+.+++....+..+. ..+..+
T Consensus 19 ~~~~v~~~d~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~ 97 (349)
T 1jmx_B 19 YPNNLHVVDVASDTVY-KSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSF 97 (349)
T ss_dssp TTTEEEEEETTTTEEE-EEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCE
T ss_pred CCCeEEEEECCCCcEE-EEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccce
Confidence 3556677776555322 122223333577899999999765 45578999999999988765554322 237788
Q ss_pred EEccCCCcEEEEecCC------------CeEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEE
Q 022074 88 CFGDESGHLIYSGSDD------------NLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLW 155 (303)
Q Consensus 88 ~~~~~~~~~l~s~s~d------------g~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lW 155 (303)
+|+| +++.+++++.+ +.|.+||+..... ......+. +...+.+++++++++ ++.++. .|++|
T Consensus 98 ~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~~--~i~~~ 171 (349)
T 1jmx_B 98 AISP-DGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLE-AKPVRTFP-MPRQVYLMRAADDGS-LYVAGP--DIYKM 171 (349)
T ss_dssp EECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGG-BCCSEEEE-CCSSCCCEEECTTSC-EEEESS--SEEEE
T ss_pred EECC-CCCEEEEEcccccccccccccCCCeEEEEECCCccc-cceeeecc-CCCcccceeECCCCc-EEEccC--cEEEE
Confidence 9975 57788777755 8999999763221 12222332 334577888999999 555544 49999
Q ss_pred Ecccc
Q 022074 156 DIRKM 160 (303)
Q Consensus 156 dl~~~ 160 (303)
|+...
T Consensus 172 d~~~~ 176 (349)
T 1jmx_B 172 DVKTG 176 (349)
T ss_dssp CTTTC
T ss_pred eCCCC
Confidence 98754
No 173
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.37 E-value=2.2e-11 Score=117.62 Aligned_cols=201 Identities=9% Similarity=-0.007 Sum_probs=127.1
Q ss_pred CCcccceEEEEEcCCCCEEE-----EeeCCCeEEEEECCCCceEEEEecccCCe--EEEEEccCCCcEEEEecCCCe---
Q 022074 36 GGYSFGIFSLKFSTDGRELV-----AGSSDDCIYVYDLEANKLSLRILAHTSDV--NTVCFGDESGHLIYSGSDDNL--- 105 (303)
Q Consensus 36 ~~~~~~v~~l~~s~~g~~l~-----sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v--~~l~~~~~~~~~l~s~s~dg~--- 105 (303)
.+|+..+.+++|||||++|+ .|+.+.+|++||+.+++... ..+...+ ..++|+| +++.|+.++.|..
T Consensus 117 ~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wsp-Dg~~l~~~~~d~~~~~ 193 (695)
T 2bkl_A 117 KDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTP-DSKGFYYEWLPTDPSI 193 (695)
T ss_dssp SSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECT-TSSEEEEEECCCCTTS
T ss_pred cCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEec-CCCEEEEEEecCCCCC
Confidence 36788899999999999988 45556789999999987530 1222333 6789975 5778888887766
Q ss_pred ----------EEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCC----cEEEEEcccccCCcccccCcc
Q 022074 106 ----------CKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQ----AIKLWDIRKMSSNASCNLGFR 171 (303)
Q Consensus 106 ----------v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~----~v~lWdl~~~~~~~~~~~~~~ 171 (303)
|++|++.........+.....|...+..+.++++|++|+..+.++ .|.+||.....
T Consensus 194 ~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~---------- 263 (695)
T 2bkl_A 194 KVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD---------- 263 (695)
T ss_dssp CGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS----------
T ss_pred ccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc----------
Confidence 999997532211111212223445688899999999988877665 44444321100
Q ss_pred ceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEe---CCCeEEEEECCCCeE---E
Q 022074 172 SYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGS---HDSCVYVYDLVSGEQ---V 245 (303)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~---~dg~i~iwd~~~~~~---~ 245 (303)
...+..+.. ....+.+ +++++++... .++.|++||+.+++. .
T Consensus 264 -------------------------~~~l~~~~~------~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~ 311 (695)
T 2bkl_A 264 -------------------------FRLLVKGVG------AKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWK 311 (695)
T ss_dssp -------------------------CEEEEECSS------CCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCE
T ss_pred -------------------------eEEeecCCC------ceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCe
Confidence 000000000 0011222 3455444443 368999999987652 2
Q ss_pred EEeecC-CCCeEEEEECCCCCeEEEEeCCCCEEEeecC
Q 022074 246 AALKYH-TSPVRDCSWHPSQPMLVSSSWDGDVVRWEFP 282 (303)
Q Consensus 246 ~~~~~h-~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~ 282 (303)
..+..+ ...+.+++|+ ++.++++...|+..++|.+.
T Consensus 312 ~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 312 EIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp EEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEE
T ss_pred EEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 223333 4568899998 77899999999999998764
No 174
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.35 E-value=1.3e-09 Score=95.02 Aligned_cols=202 Identities=13% Similarity=0.142 Sum_probs=130.2
Q ss_pred CcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCC----CeEEEEcCc
Q 022074 37 GYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDD----NLCKVWDRR 112 (303)
Q Consensus 37 ~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~d----g~v~lWd~~ 112 (303)
++...+.+++|+++|+.++++..++.|++||.++++.......+...+..+++.+ +++++++...+ +.|.+||..
T Consensus 42 ~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~-dg~l~v~~~~~~~~~~~i~~~d~~ 120 (333)
T 2dg1_A 42 KKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHK-DGRLFVCYLGDFKSTGGIFAATEN 120 (333)
T ss_dssp SSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECT-TSCEEEEECTTSSSCCEEEEECTT
T ss_pred ccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECC-CCcEEEEeCCCCCCCceEEEEeCC
Confidence 3444568999999999777888899999999988876543335667899999964 47777777666 689999965
Q ss_pred cccCCCccceeec--ccccCeEEEEeCCCCCEEEEEeCC----CcEEEEEcccccCCcccccCccceeeeceeeeCCCCC
Q 022074 113 CLNVKGKPAGVLM--GHLEGITFIDSRGDGRYLISNGKD----QAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQA 186 (303)
Q Consensus 113 ~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~~~D----~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (303)
... ....+. .+...+..+.+.++|+++++...+ ....||.+.....
T Consensus 121 ~~~----~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~------------------------ 172 (333)
T 2dg1_A 121 GDN----LQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFR------------------------ 172 (333)
T ss_dssp SCS----CEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSC------------------------
T ss_pred CCE----EEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCC------------------------
Confidence 221 111111 234568889999999887776542 2334444321100
Q ss_pred ccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEE-EEEeCCCeEEEEECCC-CeEEEE--------eecCCCCeE
Q 022074 187 RDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYI-YTGSHDSCVYVYDLVS-GEQVAA--------LKYHTSPVR 256 (303)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l-atg~~dg~i~iwd~~~-~~~~~~--------~~~h~~~I~ 256 (303)
....+... ........++++++.+ ++...++.|++||..+ ++.+.. +.++ ..+.
T Consensus 173 ---------~~~~~~~~------~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~ 236 (333)
T 2dg1_A 173 ---------TVTPIIQN------ISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPD 236 (333)
T ss_dssp ---------CEEEEEEE------ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEE
T ss_pred ---------EEEEeecC------CCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCC
Confidence 00000000 0001123467888755 4556689999999863 332221 1222 3678
Q ss_pred EEEECCCCCeEEEEeCCCCEEEeecCC
Q 022074 257 DCSWHPSQPMLVSSSWDGDVVRWEFPG 283 (303)
Q Consensus 257 ~v~~sp~~~~las~s~Dg~i~~Wd~~~ 283 (303)
.++++++++++++...++.|.+||..+
T Consensus 237 ~i~~d~~G~l~v~~~~~~~v~~~d~~g 263 (333)
T 2dg1_A 237 SCCIDSDDNLYVAMYGQGRVLVFNKRG 263 (333)
T ss_dssp EEEEBTTCCEEEEEETTTEEEEECTTS
T ss_pred ceEECCCCCEEEEEcCCCEEEEECCCC
Confidence 899999999988888889999999743
No 175
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.34 E-value=1.5e-10 Score=101.43 Aligned_cols=184 Identities=11% Similarity=0.086 Sum_probs=119.0
Q ss_pred cceEEEEEcCCCCEEEEeeCC---C--eEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecC------------
Q 022074 40 FGIFSLKFSTDGRELVAGSSD---D--CIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSD------------ 102 (303)
Q Consensus 40 ~~v~~l~~s~~g~~l~sgs~D---g--~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~------------ 102 (303)
..+..+.|||||++|+..+.+ + .|.+||+.+++... +..+.. +..++|+|+ ++.|+.++.
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~-l~~~~~-~~~~~wspd-g~~l~~~~~~~~~~~~~~~~~ 135 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKK-ILEAKN-IRSLEWNED-SRKLLIVGFKRREDEDFIFED 135 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEE-EEEESE-EEEEEECTT-SSEEEEEEECCCC--------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEE-EEcCCC-ccceeECCC-CCEEEEEEccCCCcCCcEEEc
Confidence 357889999999999887754 3 37888888876543 333334 899999764 666666542
Q ss_pred ---------------CCeEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCC-------cEEEEEcccc
Q 022074 103 ---------------DNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQ-------AIKLWDIRKM 160 (303)
Q Consensus 103 ---------------dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~-------~v~lWdl~~~ 160 (303)
...|++||+.. +.....+.. . .+..+.++|+| ++++++.+. ...||.+...
T Consensus 136 ~~~~~~~g~~~~~~~~~~l~~~d~~~----~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~ 208 (347)
T 2gop_A 136 DVPAWFDDLGFFDGEKTTFWIFDTES----EEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDG 208 (347)
T ss_dssp -CCCC---------CEEEEEEEETTT----TEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETT
T ss_pred ccceeecCcccccCccceEEEEECCC----CeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCC
Confidence 25688888752 222123333 3 67788899999 777776653 4455544310
Q ss_pred cCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCC--------C
Q 022074 161 SSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHD--------S 232 (303)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~d--------g 232 (303)
. ...+..+ .....+ +|+|++|+.++.+ .
T Consensus 209 ----~-------------------------------~~~l~~~-------~~~~~~--spdg~~l~~~~~~~~~~~~~~~ 244 (347)
T 2gop_A 209 ----K-------------------------------EEKMFEK-------VSFYAV--DSDGERILLYGKPEKKYMSEHN 244 (347)
T ss_dssp ----E-------------------------------EEEEEEE-------ESEEEE--EECSSCEEEEECCSSSCCCSSC
T ss_pred ----c-------------------------------eEEeccC-------cceeeE--CCCCCEEEEEEccccCCccccc
Confidence 0 0001000 000112 6788888777644 4
Q ss_pred eEEEEECCCCeEEEEeecCCCCeEE-EEECCCCCeEEEEeCCCCEEEeecC
Q 022074 233 CVYVYDLVSGEQVAALKYHTSPVRD-CSWHPSQPMLVSSSWDGDVVRWEFP 282 (303)
Q Consensus 233 ~i~iwd~~~~~~~~~~~~h~~~I~~-v~~sp~~~~las~s~Dg~i~~Wd~~ 282 (303)
.|++|| +++.......|...+.. +.|+ |+ ++++++.++..++| +.
T Consensus 245 ~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~ 290 (347)
T 2gop_A 245 KLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IW 290 (347)
T ss_dssp EEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EE
T ss_pred eEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-Ec
Confidence 788888 55544444566678886 9999 88 99999999999999 86
No 176
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.34 E-value=1.9e-10 Score=98.95 Aligned_cols=194 Identities=10% Similarity=0.049 Sum_probs=127.4
Q ss_pred ceEEEEEcCCCC-EEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCc
Q 022074 41 GIFSLKFSTDGR-ELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGK 119 (303)
Q Consensus 41 ~v~~l~~s~~g~-~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~ 119 (303)
...++.|+|+|+ .++++..++.|..||..++ ...+..+...+..+++.+ +++++++...++.|.+||.... +
T Consensus 29 ~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~-dg~l~v~~~~~~~i~~~d~~~g----~ 101 (296)
T 3e5z_A 29 WTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNK-QGHLIACSHGLRRLERQREPGG----E 101 (296)
T ss_dssp SEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECT-TCCEEEEETTTTEEEEECSTTC----C
T ss_pred cccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECC-CCcEEEEecCCCeEEEEcCCCC----c
Confidence 367899999998 7778888999999999887 445566777889999965 5778877777889999997422 1
Q ss_pred cceee---ccc-ccCeEEEEeCCCCCEEEEEeCCC---------------cEEEEEcccccCCcccccCccceeeeceee
Q 022074 120 PAGVL---MGH-LEGITFIDSRGDGRYLISNGKDQ---------------AIKLWDIRKMSSNASCNLGFRSYEWDYRWM 180 (303)
Q Consensus 120 ~~~~~---~~h-~~~v~~~~~~~~~~~l~s~~~D~---------------~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~ 180 (303)
..... .+. ...+..+.+.++|+++++.+.++ .-.||.+....
T Consensus 102 ~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g------------------- 162 (296)
T 3e5z_A 102 WESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDG------------------- 162 (296)
T ss_dssp EEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTS-------------------
T ss_pred EEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCCC-------------------
Confidence 11111 111 12456688899999888743211 12333332100
Q ss_pred eCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECC-CCeE---EEEeecCCCCeE
Q 022074 181 DYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLV-SGEQ---VAALKYHTSPVR 256 (303)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~-~~~~---~~~~~~h~~~I~ 256 (303)
....+.... .......++++++.+++.+.++.|++||+. +++. ...+..+...+.
T Consensus 163 ---------------~~~~~~~~~------~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~ 221 (296)
T 3e5z_A 163 ---------------TLSAPIRDR------VKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTD 221 (296)
T ss_dssp ---------------CEEEEECCC------SSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCC
T ss_pred ---------------CEEEeecCC------CCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCC
Confidence 000000000 001123477889888778888999999986 5554 233334556678
Q ss_pred EEEECCCCCeEEEEeCCCCEEEeecCC
Q 022074 257 DCSWHPSQPMLVSSSWDGDVVRWEFPG 283 (303)
Q Consensus 257 ~v~~sp~~~~las~s~Dg~i~~Wd~~~ 283 (303)
.++++++|+++++. ++.|.+|+..+
T Consensus 222 ~i~~d~~G~l~v~~--~~~v~~~~~~g 246 (296)
T 3e5z_A 222 GLRVDAGGLIWASA--GDGVHVLTPDG 246 (296)
T ss_dssp SEEEBTTSCEEEEE--TTEEEEECTTS
T ss_pred eEEECCCCCEEEEc--CCeEEEECCCC
Confidence 99999999977777 78999999764
No 177
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.31 E-value=4.1e-10 Score=96.50 Aligned_cols=189 Identities=13% Similarity=0.086 Sum_probs=130.5
Q ss_pred CCCCEEEEeeCCCeEEEEECCCCceEEEEeccc-CCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCccceeeccc
Q 022074 49 TDGRELVAGSSDDCIYVYDLEANKLSLRILAHT-SDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGH 127 (303)
Q Consensus 49 ~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~-~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h 127 (303)
..++.|++++.|+.|.+||.++|+...++..+. ..+..+.+.+ ++++++ +.++.|..||.. ++.+-.+..+
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~p-dG~ilv--s~~~~V~~~d~~-----G~~~W~~~~~ 74 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATK-AGEILF--SYSKGAKMITRD-----GRELWNIAAP 74 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECT-TSCEEE--ECBSEEEEECTT-----SCEEEEEECC
T ss_pred CCCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECC-CCCEEE--eCCCCEEEECCC-----CCEEEEEcCC
Confidence 346889999999999999999999887777665 4688888865 578887 346789999852 2333333333
Q ss_pred -ccCeEEEEeCCCCCEEEEEeC-CCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccc
Q 022074 128 -LEGITFIDSRGDGRYLISNGK-DQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSV 205 (303)
Q Consensus 128 -~~~v~~~~~~~~~~~l~s~~~-D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (303)
...+..+.+.++|+++++.+. ++.+..+|.. .+. .|... ...... ..+..
T Consensus 75 ~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~-Gk~-----------l~~~~---~~~~~~-------------~~~~~ 126 (276)
T 3no2_A 75 AGCEMQTARILPDGNALVAWCGHPSTILEVNMK-GEV-----------LSKTE---FETGIE-------------RPHAQ 126 (276)
T ss_dssp TTCEEEEEEECTTSCEEEEEESTTEEEEEECTT-SCE-----------EEEEE---ECCSCS-------------SGGGS
T ss_pred CCccccccEECCCCCEEEEecCCCCEEEEEeCC-CCE-----------EEEEe---ccCCCC-------------ccccc
Confidence 235777888999999999887 6666666532 110 01100 000000 00000
Q ss_pred eeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEECCCCCeEEEEeCCCCEEEeecC
Q 022074 206 LRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFP 282 (303)
Q Consensus 206 ~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~ 282 (303)
.....+.+++.++++...++.|..||.+ |+.+-.+..+ ..+.++.+.++++++++++.++.+..+|..
T Consensus 127 -------~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~ 194 (276)
T 3no2_A 127 -------FRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLE 194 (276)
T ss_dssp -------CSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTT
T ss_pred -------ccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCc
Confidence 0011235688999999999999999998 9988888754 456778899999999999988889888866
No 178
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.31 E-value=4.4e-12 Score=113.02 Aligned_cols=217 Identities=10% Similarity=0.074 Sum_probs=112.3
Q ss_pred cccceEEEEEcCCCCEEEEeeCC---CeEEEEECCCCceEEEEecccCC-eEEEEEccCCCcEEEEecCCCeEEEEcCcc
Q 022074 38 YSFGIFSLKFSTDGRELVAGSSD---DCIYVYDLEANKLSLRILAHTSD-VNTVCFGDESGHLIYSGSDDNLCKVWDRRC 113 (303)
Q Consensus 38 ~~~~v~~l~~s~~g~~l~sgs~D---g~v~lwd~~~~~~~~~~~~h~~~-v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~ 113 (303)
|...+.+++|+|||++|+..+.+ ..|++||+.+++.. .+..+... ...+.|+| +++.|+.++.++.|++||+..
T Consensus 34 ~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~sp-dg~~l~~~~~~~~l~~~d~~~ 111 (396)
T 3c5m_A 34 HRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAV-QLTEGKGDNTFGGFIST-DERAFFYVKNELNLMKVDLET 111 (396)
T ss_dssp ECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEE-ECCCSSCBCTTTCEECT-TSSEEEEEETTTEEEEEETTT
T ss_pred cceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEE-EeecCCCCccccceECC-CCCEEEEEEcCCcEEEEECCC
Confidence 44447778999999998776543 46888999888653 34333333 33377875 578888888888999999752
Q ss_pred ccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEccccc-CCcccccCcc-----ceeeeceeeeCCCCCc
Q 022074 114 LNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMS-SNASCNLGFR-----SYEWDYRWMDYPPQAR 187 (303)
Q Consensus 114 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~-~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 187 (303)
+........+.. +.++++.|+..+.+....+|+..... +.... ..+. .....+.....
T Consensus 112 ----~~~~~~~~~~~~------~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~-~~~~~~~~~~~~~~l~~~d~----- 175 (396)
T 3c5m_A 112 ----LEEQVIYTVDEE------WKGYGTWVANSDCTKLVGIEILKRDWQPLTSW-EKFAEFYHTNPTCRLIKVDI----- 175 (396)
T ss_dssp ----CCEEEEEECCTT------EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSH-HHHHHHHHTCCCEEEEEEET-----
T ss_pred ----CCcEEEEecccc------cCCCCCEEEeccCCccccccccccccCCCCcc-eeeeeeccCCCcceEEEEEC-----
Confidence 222222222222 22233334433333333333311000 00000 0000 00000000000
Q ss_pred cccCCCCCcceEEecccceeeeEEEeeeeeeeC-CCeEEEEEeCC------CeEEEEECCCCeEEEEeecC--CCCeEEE
Q 022074 188 DLKHPCDQSVATYKGHSVLRTLIRCHFSPVYST-GQKYIYTGSHD------SCVYVYDLVSGEQVAALKYH--TSPVRDC 258 (303)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~latg~~d------g~i~iwd~~~~~~~~~~~~h--~~~I~~v 258 (303)
.......+..+. .....+.|+| +++.|+..+.+ ..|++||...++.. .+..+ ...+..+
T Consensus 176 -----~~g~~~~~~~~~------~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~ 243 (396)
T 3c5m_A 176 -----ETGELEVIHQDT------AWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHAEGESCTHE 243 (396)
T ss_dssp -----TTCCEEEEEEES------SCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCCTTEEEEEE
T ss_pred -----CCCcEEeeccCC------cccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-EeeccCCCccccce
Confidence 000000000000 0112345788 67766665543 46999998765533 33223 2358889
Q ss_pred EECCCCCeEEEEeCC-----CCEEEeecCCC
Q 022074 259 SWHPSQPMLVSSSWD-----GDVVRWEFPGN 284 (303)
Q Consensus 259 ~~sp~~~~las~s~D-----g~i~~Wd~~~~ 284 (303)
+||||++.|+.++.+ +.|.+||+...
T Consensus 244 ~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g 274 (396)
T 3c5m_A 244 FWIPDGSAMAYVSYFKGQTDRVIYKANPETL 274 (396)
T ss_dssp EECTTSSCEEEEEEETTTCCEEEEEECTTTC
T ss_pred EECCCCCEEEEEecCCCCccceEEEEECCCC
Confidence 999999987777654 34999998653
No 179
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.29 E-value=1.3e-10 Score=104.10 Aligned_cols=171 Identities=16% Similarity=0.136 Sum_probs=121.2
Q ss_pred ceEEEEEcCCCCEEEEeeCCCeEEEEECCCCc---------eEE-EEecccCCeEEEEEccCCCcEEEEecCCCeEEEEc
Q 022074 41 GIFSLKFSTDGRELVAGSSDDCIYVYDLEANK---------LSL-RILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWD 110 (303)
Q Consensus 41 ~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~---------~~~-~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd 110 (303)
++..+++++....+++|+.|+ +++|+++.-. ... ....+.. |..++| ++++|+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f---d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF---HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE---ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE---CCCEEEEE-cCCcEEEEE
Confidence 589999999999999999986 7779875432 111 2334555 999999 46788887 889999999
Q ss_pred CccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCcccc
Q 022074 111 RRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLK 190 (303)
Q Consensus 111 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (303)
.+... .......|...+..+.+.+. .++.+..||.+.+||+......
T Consensus 113 v~sl~----~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~--------------------------- 159 (388)
T 1xip_A 113 LEELS----EFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTK--------------------------- 159 (388)
T ss_dssp SSSTT----CEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEE---------------------------
T ss_pred chhhh----ccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCccc---------------------------
Confidence 86432 12234456666777665543 3888999999999998632110
Q ss_pred CCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeE--EEEe------e---cCCCCeEEEE
Q 022074 191 HPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQ--VAAL------K---YHTSPVRDCS 259 (303)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~--~~~~------~---~h~~~I~~v~ 259 (303)
.. ...+ .+..+||+| ++.|..||.+++|+...++. .+++ . +|...|.++.
T Consensus 160 --------~~------~~~V---s~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~ 220 (388)
T 1xip_A 160 --------QL------AQNV---TSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVT 220 (388)
T ss_dssp --------EE------EESE---EEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEE
T ss_pred --------cc------cCCc---eEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEE
Confidence 00 0001 123467777 67799999999999987774 4555 2 3778999999
Q ss_pred ECCCCCeEEE
Q 022074 260 WHPSQPMLVS 269 (303)
Q Consensus 260 ~sp~~~~las 269 (303)
|.+++.+|++
T Consensus 221 wl~~~~flv~ 230 (388)
T 1xip_A 221 ILSPQDFLAV 230 (388)
T ss_dssp ESSSSEEEEE
T ss_pred EecCCeEEEE
Confidence 9999998876
No 180
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.27 E-value=2e-09 Score=90.85 Aligned_cols=197 Identities=9% Similarity=0.018 Sum_probs=128.8
Q ss_pred ceEEEEEcCCCCEEE-EeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCc
Q 022074 41 GIFSLKFSTDGRELV-AGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGK 119 (303)
Q Consensus 41 ~v~~l~~s~~g~~l~-sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~ 119 (303)
...+++++++|+..+ +.+.++.|.+||..+.........+...+..+++.+ +++++++.. ++.|..||....
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~-~~~i~~~d~~~~----- 97 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDG-AGTVYVTDF-NNRVVTLAAGSN----- 97 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECT-TCCEEEEET-TTEEEEECTTCS-----
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECC-CCCEEEEcC-CCEEEEEeCCCc-----
Confidence 578999999998666 547788999998866543221123334678888864 466776666 889999996421
Q ss_pred cceeec-ccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcce
Q 022074 120 PAGVLM-GHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVA 198 (303)
Q Consensus 120 ~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (303)
....+. ........+.+.++|+++++...++.|.+||........ ...
T Consensus 98 ~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~-----------------~~~-------------- 146 (270)
T 1rwi_B 98 NQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTV-----------------LPF-------------- 146 (270)
T ss_dssp CCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEE-----------------CCC--------------
T ss_pred eEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEe-----------------ecc--------------
Confidence 121221 223567888999999988888888999999753211000 000
Q ss_pred EEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEECCCCCeEEEEeCCCCEEE
Q 022074 199 TYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVR 278 (303)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~~las~s~Dg~i~~ 278 (303)
.+.. ......++++++++++...++.|.+||...+........+...+.+++++++++++++...++.|.+
T Consensus 147 --~~~~-------~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~ 217 (270)
T 1rwi_B 147 --TGLN-------DPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVK 217 (270)
T ss_dssp --CSCC-------SCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEE
T ss_pred --ccCC-------CceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEE
Confidence 0000 0011224567887777777899999998876544333334467899999999988888888999999
Q ss_pred eecCCC
Q 022074 279 WEFPGN 284 (303)
Q Consensus 279 Wd~~~~ 284 (303)
|+..+.
T Consensus 218 ~~~~~~ 223 (270)
T 1rwi_B 218 LLAGST 223 (270)
T ss_dssp ECTTCS
T ss_pred EcCCCC
Confidence 997654
No 181
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.27 E-value=7.7e-10 Score=93.42 Aligned_cols=199 Identities=8% Similarity=0.029 Sum_probs=131.5
Q ss_pred cceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCc
Q 022074 40 FGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGK 119 (303)
Q Consensus 40 ~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~ 119 (303)
..+.+++++++|+.+++.. ++.|.+||..+.............+..+++.+ +++++++...++.|.+|+.... .
T Consensus 67 ~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~----~ 140 (270)
T 1rwi_B 67 YQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDT-QGAVYVADRGNNRVVKLAAGSK----T 140 (270)
T ss_dssp CSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEECCCCSCSSEEEEEECT-TCCEEEEEGGGTEEEEECTTCC----S
T ss_pred CCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeeecCCcCCCcceEECC-CCCEEEEECCCCEEEEEECCCc----e
Confidence 4577899999998555555 88999999877654321112335688999965 5778877777889999975311 1
Q ss_pred cceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceE
Q 022074 120 PAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVAT 199 (303)
Q Consensus 120 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (303)
..............+.+.++++++++...++.|.+||........ ... . ..
T Consensus 141 ~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~-----------------~~~---------~-~~-- 191 (270)
T 1rwi_B 141 QTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVV-----------------LPF---------T-DI-- 191 (270)
T ss_dssp CEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEE-----------------CCC---------S-SC--
T ss_pred eEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEe-----------------ecc---------c-CC--
Confidence 111111222356678889999988888788999999875321000 000 0 00
Q ss_pred EecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEECCCCCeEEEEeCCCCEEEe
Q 022074 200 YKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRW 279 (303)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~~las~s~Dg~i~~W 279 (303)
. ......+++++.++++...++.|.+||............+...+.+++++|+++++++...++.|+++
T Consensus 192 ----~-------~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~ 260 (270)
T 1rwi_B 192 ----T-------APWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKL 260 (270)
T ss_dssp ----C-------SEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEE
T ss_pred ----C-------CceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEE
Confidence 0 00112345677777777788999999987654332222334578999999999999999999999999
Q ss_pred ecCCC
Q 022074 280 EFPGN 284 (303)
Q Consensus 280 d~~~~ 284 (303)
+....
T Consensus 261 ~~~~~ 265 (270)
T 1rwi_B 261 TSLEH 265 (270)
T ss_dssp CCCGG
T ss_pred cCCCc
Confidence 97643
No 182
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.27 E-value=1.3e-10 Score=103.40 Aligned_cols=230 Identities=12% Similarity=0.008 Sum_probs=129.9
Q ss_pred EEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEE---E----------------EEccCCCcEEEEe---
Q 022074 43 FSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNT---V----------------CFGDESGHLIYSG--- 100 (303)
Q Consensus 43 ~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~---l----------------~~~~~~~~~l~s~--- 100 (303)
..+.|+|||++|+..+.++.|++||+.+++.......+...... + .|+| +++.++.+
T Consensus 84 ~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~sp-dg~~~~~~~~~ 162 (396)
T 3c5m_A 84 FGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQP-LTSWEKFAEFY 162 (396)
T ss_dssp TTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCC-CCSHHHHHHHH
T ss_pred ccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCC-CCcceeeeeec
Confidence 34789999999999999999999999988755433333332222 2 2333 23333322
Q ss_pred --cCCCeEEEEcCccccCCCccceeecccccCeEEEEeCC-CCCEEEEEeCC------CcEEEEEcccccCCcccccCcc
Q 022074 101 --SDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRG-DGRYLISNGKD------QAIKLWDIRKMSSNASCNLGFR 171 (303)
Q Consensus 101 --s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~D------~~v~lWdl~~~~~~~~~~~~~~ 171 (303)
..+..|++||+.. +. ...+..+...+..+.++| ++..|+..+.+ ..|.+||+.......... .
T Consensus 163 ~~~~~~~l~~~d~~~----g~-~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~---~ 234 (396)
T 3c5m_A 163 HTNPTCRLIKVDIET----GE-LEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE---H 234 (396)
T ss_dssp HTCCCEEEEEEETTT----CC-EEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC---C
T ss_pred cCCCcceEEEEECCC----Cc-EEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec---c
Confidence 3566888998752 22 223334566788889999 78777665543 357778875322110000 0
Q ss_pred ceeeeceeeeCCCCCccccCCC----CCc--ceEEecccc-eeeeE--EEeeeeeeeC-CCeEEEEEe------------
Q 022074 172 SYEWDYRWMDYPPQARDLKHPC----DQS--VATYKGHSV-LRTLI--RCHFSPVYST-GQKYIYTGS------------ 229 (303)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~----~~~--~~~~~~~~~-~~~~~--~~~~~~~~s~-~~~~latg~------------ 229 (303)
...+......+.|+.+.+.... ... +..++-... ...+. ... .+.+++ ++++++.++
T Consensus 235 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~-~~~~s~~dg~~l~~~~~~~p~~~~~~~~ 313 (396)
T 3c5m_A 235 AEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPPC-SHLMSNFDGSLMVGDGCDAPVDVADADS 313 (396)
T ss_dssp CTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCSE-EEEEECSSSSEEEEEECCC---------
T ss_pred CCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCCC-CCCccCCCCceEEEecCCcceeeccccc
Confidence 0011122234445544332110 011 333321111 01110 011 166888 999888765
Q ss_pred ----CCCeEEEEECCCCeEEEEeecCCC-----------CeEEEEECCCCCeEEEEeC-CCCEEEeecCC
Q 022074 230 ----HDSCVYVYDLVSGEQVAALKYHTS-----------PVRDCSWHPSQPMLVSSSW-DGDVVRWEFPG 283 (303)
Q Consensus 230 ----~dg~i~iwd~~~~~~~~~~~~h~~-----------~I~~v~~sp~~~~las~s~-Dg~i~~Wd~~~ 283 (303)
.+..|++||..+++. ..+..+.. .+..++|+||++.|+.++. ++...+|.+..
T Consensus 314 ~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~ 382 (396)
T 3c5m_A 314 YNIENDPFLYVLNTKAKSA-QKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADV 382 (396)
T ss_dssp -CCCCCCEEEEEETTTTBC-CEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEEC
T ss_pred cccCCCCcEEEEecccCce-EEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEE
Confidence 347899999988764 33444543 2567899999998776654 67777776643
No 183
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.26 E-value=2.2e-09 Score=92.21 Aligned_cols=191 Identities=11% Similarity=0.039 Sum_probs=124.8
Q ss_pred CcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecc----cCCeEEEEEccCCCcEEEE----ec-------
Q 022074 37 GYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAH----TSDVNTVCFGDESGHLIYS----GS------- 101 (303)
Q Consensus 37 ~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h----~~~v~~l~~~~~~~~~l~s----~s------- 101 (303)
.+...+.+++++++|+.+++...++.|.+||.++++........ ...++.+++.+ +++++++ |+
T Consensus 66 ~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~-~G~l~vtd~~~g~~~~~~~~ 144 (296)
T 3e5z_A 66 HPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAP-DGSLWFSDPTYGIDKPEEGY 144 (296)
T ss_dssp SSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECT-TSCEEEEECSHHHHCGGGSS
T ss_pred CCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECC-CCCEEEECCccccccccccc
Confidence 34556899999999998777777789999999888754322221 12456788864 5778887 33
Q ss_pred ------CCCeEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceee
Q 022074 102 ------DDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEW 175 (303)
Q Consensus 102 ------~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~ 175 (303)
..+.|..++.. + ....+..+......++++++++.+++.+.++.|.+||+.... ... ..
T Consensus 145 ~~~~~~~~~~l~~~~~~-----g-~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g---~~~---~~--- 209 (296)
T 3e5z_A 145 GGEMELPGRWVFRLAPD-----G-TLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARG---ETE---YQ--- 209 (296)
T ss_dssp CCCCCSSSCEEEEECTT-----S-CEEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSS---CEE---EE---
T ss_pred cccccCCCcEEEEECCC-----C-CEEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCC---cCc---CC---
Confidence 13455555532 1 223344555667889999999988888888999999985210 000 00
Q ss_pred eceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEeecCCCCe
Q 022074 176 DYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPV 255 (303)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~h~~~I 255 (303)
....... . .. .....++++|+++++. ++.|.+||.. ++.+..+..+.. +
T Consensus 210 -~~~~~~~----------~---------~~-------p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~~-~ 258 (296)
T 3e5z_A 210 -GVHFTVE----------P---------GK-------TDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLTPQT-T 258 (296)
T ss_dssp -EEEECCS----------S---------SC-------CCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEECSSC-C
T ss_pred -CeEeeCC----------C---------CC-------CCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEECCCC-c
Confidence 0000000 0 00 0012356778866665 8899999986 777788887777 9
Q ss_pred EEEEE-CCCCCeEEEEeCCC
Q 022074 256 RDCSW-HPSQPMLVSSSWDG 274 (303)
Q Consensus 256 ~~v~~-sp~~~~las~s~Dg 274 (303)
++++| +|+++.|..++.++
T Consensus 259 ~~~~f~~~d~~~L~v~t~~~ 278 (296)
T 3e5z_A 259 SNLCFGGPEGRTLYMTVSTE 278 (296)
T ss_dssp CEEEEESTTSCEEEEEETTE
T ss_pred eeEEEECCCCCEEEEEcCCe
Confidence 99999 68999888887763
No 184
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.24 E-value=9.2e-10 Score=97.75 Aligned_cols=188 Identities=13% Similarity=0.171 Sum_probs=115.6
Q ss_pred EEEEeeCC--CeEEEEEC--CCCceEEEEe---cccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCccceeec
Q 022074 53 ELVAGSSD--DCIYVYDL--EANKLSLRIL---AHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLM 125 (303)
Q Consensus 53 ~l~sgs~D--g~v~lwd~--~~~~~~~~~~---~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~ 125 (303)
++++|+.. +.|.+|++ .++++..... .....+..++|++ ++++|++++.+ .|.+||+.. .++.....
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~sp-dg~~l~~~~~~-~v~~~~~~~---~g~~~~~~- 77 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDH-ERKNIYGAAMK-KWSSFAVKS---PTEIVHEA- 77 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECT-TSSEEEEEEBT-EEEEEEEEE---TTEEEEEE-
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECC-CCCEEEEEccc-eEEEEEECC---CCCEEEee-
Confidence 45666653 56888765 5565432211 2334678899975 57788888877 999999741 12222111
Q ss_pred ccc--cCeEEEEeCCCCCE--EEEEe-------------CCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCcc
Q 022074 126 GHL--EGITFIDSRGDGRY--LISNG-------------KDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARD 188 (303)
Q Consensus 126 ~h~--~~v~~~~~~~~~~~--l~s~~-------------~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (303)
.+. .....++++|+|++ +++++ .++++++|++...-. . ...
T Consensus 78 ~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~---~-------~~~------------ 135 (365)
T 1jof_A 78 SHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGK---L-------EKN------------ 135 (365)
T ss_dssp EEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCC---E-------EEE------------
T ss_pred EeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCc---C-------cce------------
Confidence 111 22445778999984 44553 689999999853100 0 000
Q ss_pred ccCCCCCcceEEe-cccceeeeEEEeeeeeeeCCCeEEEEEe-CCCeEEEEECC-CCeEE--EEee--cCCCCeEEEEEC
Q 022074 189 LKHPCDQSVATYK-GHSVLRTLIRCHFSPVYSTGQKYIYTGS-HDSCVYVYDLV-SGEQV--AALK--YHTSPVRDCSWH 261 (303)
Q Consensus 189 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~~~latg~-~dg~i~iwd~~-~~~~~--~~~~--~h~~~I~~v~~s 261 (303)
+..+. .+. .......++|+|+++++++ .++.|++||+. +++.. ..+. .|...+..++||
T Consensus 136 --------~~~~~~~~~------~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~s 201 (365)
T 1jof_A 136 --------VQNYEYQEN------TGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMH 201 (365)
T ss_dssp --------EEEEECCTT------CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEEC
T ss_pred --------EeeEEeCCC------CcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEEC
Confidence 00000 000 0012345789999888765 47899999998 77642 3343 245678999999
Q ss_pred CCCCeEEEEeC-CCCEEEeecC
Q 022074 262 PSQPMLVSSSW-DGDVVRWEFP 282 (303)
Q Consensus 262 p~~~~las~s~-Dg~i~~Wd~~ 282 (303)
|||++|+.+++ ++++.+|++.
T Consensus 202 pdg~~l~v~~~~~~~v~v~~~~ 223 (365)
T 1jof_A 202 PTGNYLYALMEAGNRICEYVID 223 (365)
T ss_dssp TTSSEEEEEETTTTEEEEEEEC
T ss_pred CCCCEEEEEECCCCeEEEEEEe
Confidence 99998887775 6899999875
No 185
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.23 E-value=7.9e-10 Score=107.49 Aligned_cols=201 Identities=9% Similarity=0.000 Sum_probs=122.0
Q ss_pred CcccceEEEEEcCCCCEEEEeeCC-----CeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCe------
Q 022074 37 GYSFGIFSLKFSTDGRELVAGSSD-----DCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNL------ 105 (303)
Q Consensus 37 ~~~~~v~~l~~s~~g~~l~sgs~D-----g~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~------ 105 (303)
+|+..+.+++|||||++|+.++.+ .+|++||+.+++.... ..+...+..++|+|+ +.|+.++.++.
T Consensus 160 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~~~~~~~~~wspD--~~l~~~~~~~~~~~~~~ 236 (741)
T 1yr2_A 160 DGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELKWVKFSGLAWLGN--DALLYSRFAEPKEGQAF 236 (741)
T ss_dssp ---EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEEEEESCCCEESTT--SEEEEEECCCC------
T ss_pred CCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCCCceeccEEEECC--CEEEEEEecCccccccc
Confidence 456788999999999999887654 3699999999976432 112222357889765 56666655443
Q ss_pred --------EEEEcCccccCCCccceeecc--cccCeEEEEeCCCCCEEEEEeCCC-----cEEEEEcccccCCcccccCc
Q 022074 106 --------CKVWDRRCLNVKGKPAGVLMG--HLEGITFIDSRGDGRYLISNGKDQ-----AIKLWDIRKMSSNASCNLGF 170 (303)
Q Consensus 106 --------v~lWd~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~~~D~-----~v~lWdl~~~~~~~~~~~~~ 170 (303)
|++|++...... ....+.. +...+..+.++++|++|+..+.++ .|++||+...... +
T Consensus 237 ~~~~~~~~v~~~~lgt~~~~--~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~--~---- 308 (741)
T 1yr2_A 237 QALNYNQTVWLHRLGTPQSA--DQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIG--P---- 308 (741)
T ss_dssp --CCCCCEEEEEETTSCGGG--CEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEEC--C----
T ss_pred ccCCCCCEEEEEECCCCchh--CEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCc--c----
Confidence 888887422111 1122222 223477889999999988777544 7888887532000 0
Q ss_pred cceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeC----CCeEEEEECCCC--eE
Q 022074 171 RSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSH----DSCVYVYDLVSG--EQ 244 (303)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~----dg~i~iwd~~~~--~~ 244 (303)
...+..+.... ..+ ++++++.|+..+. ++.|++||+.++ +.
T Consensus 309 --------------------------~~~l~~~~~~~------~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~ 355 (741)
T 1yr2_A 309 --------------------------VTALIPDLKAQ------WDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRF 355 (741)
T ss_dssp --------------------------CEEEECSSSSC------EEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEE
T ss_pred --------------------------cEEecCCCCce------EEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCcccc
Confidence 00000000000 011 1245666666554 456999999874 33
Q ss_pred EEEeecCCCCeEEEEECCCCCeEEEEeCCCCEEEeecC
Q 022074 245 VAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFP 282 (303)
Q Consensus 245 ~~~~~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~ 282 (303)
...+..+...+.+++|+ ++.++++...|+..++|.+.
T Consensus 356 ~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 356 DTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFD 392 (741)
T ss_dssp EEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEE
T ss_pred EEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 33344555567788887 66789999999998888654
No 186
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.20 E-value=2.7e-08 Score=86.63 Aligned_cols=197 Identities=12% Similarity=0.110 Sum_probs=121.7
Q ss_pred cccceEEEEEcCCCCEEEEeeCC----CeEEEEECCCCceEEEEe--cccCCeEEEEEccCCCcEEEEecC------CCe
Q 022074 38 YSFGIFSLKFSTDGRELVAGSSD----DCIYVYDLEANKLSLRIL--AHTSDVNTVCFGDESGHLIYSGSD------DNL 105 (303)
Q Consensus 38 ~~~~v~~l~~s~~g~~l~sgs~D----g~v~lwd~~~~~~~~~~~--~h~~~v~~l~~~~~~~~~l~s~s~------dg~ 105 (303)
+...+.+++++++|+.+++...+ +.|.+||.+++.....+. .+...+..+++.+ +++++++... .+.
T Consensus 85 ~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~ 163 (333)
T 2dg1_A 85 HKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDS-KGGFYFTDFRGYSTNPLGG 163 (333)
T ss_dssp SSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECT-TSCEEEEECCCBTTBCCEE
T ss_pred CCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECC-CCCEEEEeccccccCCCce
Confidence 45679999999999977776666 689999998877543332 2345688999965 5777776653 345
Q ss_pred EEEEcCccccCCCccceeecccccCeEEEEeCCCCCEE-EEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCC
Q 022074 106 CKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYL-ISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPP 184 (303)
Q Consensus 106 v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (303)
|..+|... .. ...+..+......+.++++++.+ ++.+.++.|.+||++...... .. +...
T Consensus 164 l~~~~~~~----~~-~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~------~~--~~~~------ 224 (333)
T 2dg1_A 164 VYYVSPDF----RT-VTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTI------QP--FGAT------ 224 (333)
T ss_dssp EEEECTTS----CC-EEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSE------EE--EEEE------
T ss_pred EEEEeCCC----CE-EEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCc------cc--ccce------
Confidence 65565421 11 22222333457788899999855 555668899999985310000 00 0000
Q ss_pred CCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEeecCCC------CeEEE
Q 022074 185 QARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTS------PVRDC 258 (303)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~h~~------~I~~v 258 (303)
....+.++.. .....+++++.++++...++.|.+||. +++.+..+..+.. .+.++
T Consensus 225 -----------~~~~~~~~~~-------~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~ 285 (333)
T 2dg1_A 225 -----------IPYYFTGHEG-------PDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHP 285 (333)
T ss_dssp -----------EEEECCSSSE-------EEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEE
T ss_pred -----------EEEecCCCCC-------CCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceE
Confidence 0000000000 011235678888888778899999998 5666666654433 68999
Q ss_pred EECCCCCeEEEEeCC
Q 022074 259 SWHPSQPMLVSSSWD 273 (303)
Q Consensus 259 ~~sp~~~~las~s~D 273 (303)
+|+||++.|..++.+
T Consensus 286 ~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 286 QFIPGTNQLIICSND 300 (333)
T ss_dssp EECTTSCEEEEEEEC
T ss_pred EECCCCCEEEEEeCc
Confidence 999998766544444
No 187
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.20 E-value=5.7e-09 Score=89.32 Aligned_cols=205 Identities=10% Similarity=-0.005 Sum_probs=135.4
Q ss_pred hhhccccccccccCcCcccccCCCcc-cceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEeccc-CCeEEEEEcc
Q 022074 14 TMESLANVTEIHDGLDFSAADDGGYS-FGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHT-SDVNTVCFGD 91 (303)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~-~~v~~l~~~~ 91 (303)
+.+..+.+++.-+|...-.. ..+. ..+.++.++|+|+.++ +.++.|+.||. +++..-++..+. ..+..+.+.+
T Consensus 12 ~~~~~v~~~d~~tG~~~w~~--~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~ 86 (276)
T 3no2_A 12 SGWNKIAIINKDTKEIVWEY--PLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILP 86 (276)
T ss_dssp TTCSEEEEEETTTTEEEEEE--ECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECT
T ss_pred CCCCEEEEEECCCCeEEEEe--CCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccEECC
Confidence 44567777777666633111 1122 3578899999999888 45778999999 777766666542 4677778854
Q ss_pred CCCcEEEEecC-CCeEEEEcCccccCCCccceee------cccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCc
Q 022074 92 ESGHLIYSGSD-DNLCKVWDRRCLNVKGKPAGVL------MGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNA 164 (303)
Q Consensus 92 ~~~~~l~s~s~-dg~v~lWd~~~~~~~~~~~~~~------~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~ 164 (303)
+++.+++.+. ++.|..+|.. ++.+..+ .++......++..++|+++++...++.|..||.. .+.
T Consensus 87 -dG~~lv~~~~~~~~v~~vd~~-----Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~-- 157 (276)
T 3no2_A 87 -DGNALVAWCGHPSTILEVNMK-----GEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQL-- 157 (276)
T ss_dssp -TSCEEEEEESTTEEEEEECTT-----SCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCE--
T ss_pred -CCCEEEEecCCCCEEEEEeCC-----CCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCE--
Confidence 5788888776 7777777642 2222111 1122233445678899999999999999999975 322
Q ss_pred ccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeE
Q 022074 165 SCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQ 244 (303)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~ 244 (303)
.|.+. .... .+.....+++.++++++.+++|..+|..+|+.
T Consensus 158 ---------~w~~~-----------------------~~~~-------~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~ 198 (276)
T 3no2_A 158 ---------LNSVK-----------------------LSGT-------PFSSAFLDNGDCLVACGDAHCFVQLNLESNRI 198 (276)
T ss_dssp ---------EEEEE-----------------------CSSC-------CCEEEECTTSCEEEECBTTSEEEEECTTTCCE
T ss_pred ---------EEEEE-----------------------CCCC-------ccceeEcCCCCEEEEeCCCCeEEEEeCcCCcE
Confidence 11111 0000 00112346788888888888999999999999
Q ss_pred EEEeecCC------CCeEEEEECCCCCeEEEEe
Q 022074 245 VAALKYHT------SPVRDCSWHPSQPMLVSSS 271 (303)
Q Consensus 245 ~~~~~~h~------~~I~~v~~sp~~~~las~s 271 (303)
+-++..+. ..+..++..++|+++++..
T Consensus 199 ~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 199 VRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred EEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 88876432 2378999999999888874
No 188
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.20 E-value=2.4e-09 Score=103.51 Aligned_cols=227 Identities=11% Similarity=0.066 Sum_probs=137.3
Q ss_pred ccccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEeeCCCe----------------EEEEECCCCceE--EEEe
Q 022074 17 SLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDC----------------IYVYDLEANKLS--LRIL 78 (303)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~----------------v~lwd~~~~~~~--~~~~ 78 (303)
+-+.|+++-+|.... + .-....+.+++|+|||+.|+.++.++. |++|++.+++.. ....
T Consensus 151 ~~i~v~d~~tg~~~~--~-~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~ 227 (710)
T 2xdw_A 151 VTIKFMKVDGAKELP--D-VLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAE 227 (710)
T ss_dssp EEEEEEETTTTEEEE--E-EEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEEC
T ss_pred EEEEEEECCCCCCCc--c-cccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEec
Confidence 356666665544221 1 111123667999999999999988876 999999887632 2222
Q ss_pred c--ccCCeEEEEEccCCCcEEEEecC-----CCeEEEEcCcccc--CCC-ccceeecccccCeEEEEeCCCCCEEEEEeC
Q 022074 79 A--HTSDVNTVCFGDESGHLIYSGSD-----DNLCKVWDRRCLN--VKG-KPAGVLMGHLEGITFIDSRGDGRYLISNGK 148 (303)
Q Consensus 79 ~--h~~~v~~l~~~~~~~~~l~s~s~-----dg~v~lWd~~~~~--~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 148 (303)
. |...+..+.|+++ ++.|+.++. +..|++||+.... ..+ .....+..+.+.+.. .++++|..|+..+.
T Consensus 228 ~~~~~~~~~~~~~SpD-g~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~ 305 (710)
T 2xdw_A 228 FPDEPKWMGGAELSDD-GRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTN 305 (710)
T ss_dssp CTTCTTCEEEEEECTT-SCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEEC
T ss_pred cCCCCeEEEEEEEcCC-CCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEEC
Confidence 2 4455778899764 666665543 5689999975300 001 123445556665554 36678877765554
Q ss_pred C----CcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeE
Q 022074 149 D----QAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKY 224 (303)
Q Consensus 149 D----~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 224 (303)
+ ..|.+||+...... . ...+..+.... .+ ....+++++.+
T Consensus 306 ~~~~~~~l~~~d~~~~~~~----------~----------------------~~~l~~~~~~~-~~---~~~~~~~~~~l 349 (710)
T 2xdw_A 306 RHSPNYRLINIDFTDPEES----------K----------------------WKVLVPEHEKD-VL---EWVACVRSNFL 349 (710)
T ss_dssp TTCTTCEEEEEETTSCCGG----------G----------------------CEEEECCCSSC-EE---EEEEEETTTEE
T ss_pred CCCCCCEEEEEeCCCCCcc----------c----------------------ceeccCCCCCC-eE---EEEEEEcCCEE
Confidence 3 35888887532100 0 00000010000 00 01224457788
Q ss_pred EEEEeCCCe--EEEEECCCCeEEEEeecCCCCeEEEEECCCCCeEE-EEe---CCCCEEEeecCCC
Q 022074 225 IYTGSHDSC--VYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLV-SSS---WDGDVVRWEFPGN 284 (303)
Q Consensus 225 latg~~dg~--i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~~la-s~s---~Dg~i~~Wd~~~~ 284 (303)
++++..|+. |++||+.+++.+..+..+...+..++++|+++.++ +.+ ..+++..||+...
T Consensus 350 v~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg 415 (710)
T 2xdw_A 350 VLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKE 415 (710)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSS
T ss_pred EEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCC
Confidence 888988884 66678767887777877888899999999997555 322 3478999998653
No 189
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.16 E-value=3.2e-09 Score=94.39 Aligned_cols=212 Identities=15% Similarity=0.088 Sum_probs=121.7
Q ss_pred cceEEEEEcCCCCEEEEeeC--CCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCC
Q 022074 40 FGIFSLKFSTDGRELVAGSS--DDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVK 117 (303)
Q Consensus 40 ~~v~~l~~s~~g~~l~sgs~--Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~ 117 (303)
.....++++|||++|+++.. +++|.+||+.+++....+..+.+ ...+.+.|.....+++.+.||.+.+|+... .
T Consensus 108 ~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~-~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~---~ 183 (361)
T 2oiz_A 108 NYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAG-CWSVIPQPNRPRSFMTICGDGGLLTINLGE---D 183 (361)
T ss_dssp CCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTT-EEEEEECTTSSSEEEEEETTSSEEEEEECT---T
T ss_pred CCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCC-cceeEEcCCCCeeEEEECCCCcEEEEEECC---C
Confidence 34567899999999999874 67899999999987655133322 222444465556788888999999888642 1
Q ss_pred Cccc------eeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCc--c--------c-----ccCccceeee
Q 022074 118 GKPA------GVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNA--S--------C-----NLGFRSYEWD 176 (303)
Q Consensus 118 ~~~~------~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~--~--------~-----~~~~~~~~~~ 176 (303)
++.. ..+..+...+ .+.+.+++..++..+.++.+.++|+....... . . ..+.+.+.+.
T Consensus 184 g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~ 262 (361)
T 2oiz_A 184 GKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLH 262 (361)
T ss_dssp SSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEE
T ss_pred CcEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEe
Confidence 1111 0111111111 22234556666666778888888875321100 0 0 0000001111
Q ss_pred c----eeeeCCCCCc---------c---ccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECC
Q 022074 177 Y----RWMDYPPQAR---------D---LKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLV 240 (303)
Q Consensus 177 ~----~~~~~~~~~~---------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~ 240 (303)
. .+....++.. . +-....+.+..+..+. .....|+|++++|++++. +.|.+||..
T Consensus 263 ~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--------p~~ia~spdg~~l~v~n~-~~v~v~D~~ 333 (361)
T 2oiz_A 263 RASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--------ALSMTIDQQRNLMLTLDG-GNVNVYDIS 333 (361)
T ss_dssp TTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--------CCEEEEETTTTEEEEECS-SCEEEEECS
T ss_pred cCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--------eeEEEECCCCCEEEEeCC-CeEEEEECC
Confidence 1 0111110000 0 0001111222222221 233457899999998887 999999999
Q ss_pred CC--eEEEEeecCCCCeEEEEECCCCC
Q 022074 241 SG--EQVAALKYHTSPVRDCSWHPSQP 265 (303)
Q Consensus 241 ~~--~~~~~~~~h~~~I~~v~~sp~~~ 265 (303)
++ +.+..+..+......++++|+|+
T Consensus 334 t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 334 QPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp SSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred CCcceeeEEeccCCCCcEEEEecCCCC
Confidence 99 98888766777889999999986
No 190
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.15 E-value=5.6e-09 Score=91.37 Aligned_cols=182 Identities=12% Similarity=0.205 Sum_probs=115.7
Q ss_pred eEEEEEcCCCCEEEEeeCC---------------------------CeEEEEECCCCceEEEEecccCCeEEEEEccCCC
Q 022074 42 IFSLKFSTDGRELVAGSSD---------------------------DCIYVYDLEANKLSLRILAHTSDVNTVCFGDESG 94 (303)
Q Consensus 42 v~~l~~s~~g~~l~sgs~D---------------------------g~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~ 94 (303)
+.++.|+|||+.|+.++.+ ..|++||+.+++....+.. . .+..+.|+|+ +
T Consensus 106 ~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spd-g 182 (347)
T 2gop_A 106 IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRD-K 182 (347)
T ss_dssp EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETT-E
T ss_pred ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCC-e
Confidence 8899999999998888743 5799999998876344444 3 7888999764 5
Q ss_pred cEEEEecCCC-------eEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCC--------cEEEEEccc
Q 022074 95 HLIYSGSDDN-------LCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQ--------AIKLWDIRK 159 (303)
Q Consensus 95 ~~l~s~s~dg-------~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~--------~v~lWdl~~ 159 (303)
++++++.++ ...+|... .+. ...+..+ ..+..+ +|+|++|+..+.+. .|.+|| ..
T Consensus 183 -~~~~~~~~~~~~~~~~~~~l~~~d----~~~-~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d-~~ 252 (347)
T 2gop_A 183 -IVVNVPHREIIPQYFKFWDIYIWE----DGK-EEKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD-GK 252 (347)
T ss_dssp -EEEEEECCCSSCCSSCCEEEEEEE----TTE-EEEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC-SS
T ss_pred -EEEEEecccccccccccccEEEeC----CCc-eEEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC-CC
Confidence 777775542 44565543 122 2233334 444444 78999888777543 455555 11
Q ss_pred ccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEEC
Q 022074 160 MSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDL 239 (303)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~ 239 (303)
.. . . + ..++.. .+. ..+.|+ ++ ++++++.++.+++| +
T Consensus 253 -~~--~-~---------------------l----------~~~~~~---~~~--~~~~~s-dg-~~~~~~~~~~~~l~-~ 289 (347)
T 2gop_A 253 -EV--M-G---------------------I----------LDEVDR---GVG--QAKIKD-GK-VYFTLFEEGSVNLY-I 289 (347)
T ss_dssp -CE--E-E---------------------S----------STTCCS---EEE--EEEEET-TE-EEEEEEETTEEEEE-E
T ss_pred -ce--E-e---------------------c----------cccCCc---ccC--CccEEc-Cc-EEEEEecCCcEEEE-E
Confidence 00 0 0 0 000000 000 013467 77 88999999999999 8
Q ss_pred CCCeEEEEeecCCCCeEEEEECCCCCeEEEEeCCCCE-EEeecC
Q 022074 240 VSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDV-VRWEFP 282 (303)
Q Consensus 240 ~~~~~~~~~~~h~~~I~~v~~sp~~~~las~s~Dg~i-~~Wd~~ 282 (303)
.+++... +..+...|.+++|+| .++++++.++.. .+|.+.
T Consensus 290 ~~g~~~~-~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 290 WDGEIKP-IAKGRHWIMGFDVDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp ESSSEEE-EECSSSEEEEEEESS--SEEEEEECSSSCCEEEEES
T ss_pred cCCceEE-EecCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC
Confidence 7666543 334577899999999 677777777765 788765
No 191
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.14 E-value=2.9e-08 Score=85.41 Aligned_cols=204 Identities=12% Similarity=0.137 Sum_probs=127.8
Q ss_pred CcccceEEEEEcCC-CCEEEEeeCCCeEEEEECCCCceEEEE-ec-----ccCCeEEEEEccCCCcEEEEecCC------
Q 022074 37 GYSFGIFSLKFSTD-GRELVAGSSDDCIYVYDLEANKLSLRI-LA-----HTSDVNTVCFGDESGHLIYSGSDD------ 103 (303)
Q Consensus 37 ~~~~~v~~l~~s~~-g~~l~sgs~Dg~v~lwd~~~~~~~~~~-~~-----h~~~v~~l~~~~~~~~~l~s~s~d------ 103 (303)
|+...+.++.++++ |+.++ ++.++.|.+||.+ ++.. .+ .. ....+..+++.+ +++++++...+
T Consensus 68 ~~~~~~~~i~~~~~~g~l~v-~~~~~~l~~~d~~-g~~~-~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~ 143 (314)
T 1pjx_A 68 GYGGIPAGCQCDRDANQLFV-ADMRLGLLVVQTD-GTFE-EIAKKDSEGRRMQGCNDCAFDY-EGNLWITAPAGEVAPAD 143 (314)
T ss_dssp TEECCEEEEEECSSSSEEEE-EETTTEEEEEETT-SCEE-ECCSBCTTSCBCBCCCEEEECT-TSCEEEEECBCBCTTSC
T ss_pred CCCCCCceEEEecCCCcEEE-EECCCCEEEEeCC-CCEE-EEEeccCCCccccCCcCEEECC-CCCEEEEecCccccccc
Confidence 46677999999999 65444 4444479999998 6543 23 21 113478899864 57777776554
Q ss_pred ---------CeEEEEcCccccCCCccceeecccccCeEEEEeC----CCCCEE-EEEeCCCcEEEEEcccccCCcccccC
Q 022074 104 ---------NLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSR----GDGRYL-ISNGKDQAIKLWDIRKMSSNASCNLG 169 (303)
Q Consensus 104 ---------g~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~----~~~~~l-~s~~~D~~v~lWdl~~~~~~~~~~~~ 169 (303)
+.|..||.. ++ ...+..+......+.++ ++++.+ ++...++.|.+||+.... ..
T Consensus 144 ~~~~~~~~~~~l~~~~~~-----g~-~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g---~~--- 211 (314)
T 1pjx_A 144 YTRSMQEKFGSIYCFTTD-----GQ-MIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPA---KI--- 211 (314)
T ss_dssp CCBTTSSSCEEEEEECTT-----SC-EEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETT---EE---
T ss_pred ccccccCCCCeEEEECCC-----CC-EEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCC---cc---
Confidence 566667642 11 12222333445677788 888655 555678999999975210 00
Q ss_pred ccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEee
Q 022074 170 FRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALK 249 (303)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~ 249 (303)
.... . ...+.++.. .......+++++.++++...++.|.+||..+++.+..+.
T Consensus 212 -~~~~---~------------------~~~~~~~~~-----~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~ 264 (314)
T 1pjx_A 212 -ENKK---V------------------WGHIPGTHE-----GGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIR 264 (314)
T ss_dssp -EEEE---E------------------EEECCCCSS-----CEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEE
T ss_pred -ccce---E------------------EEECCCCCC-----CCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEe
Confidence 0000 0 000000000 000112356788888888788999999998787766777
Q ss_pred cCCCCeEEEEECCCCC-eEEEEeCCCCEEEeecCC
Q 022074 250 YHTSPVRDCSWHPSQP-MLVSSSWDGDVVRWEFPG 283 (303)
Q Consensus 250 ~h~~~I~~v~~sp~~~-~las~s~Dg~i~~Wd~~~ 283 (303)
.+...+.+++|+|+++ ++++...++.|..|++..
T Consensus 265 ~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 265 CPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp CSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 7777899999999999 556666678999999764
No 192
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.13 E-value=2.6e-08 Score=87.15 Aligned_cols=192 Identities=11% Similarity=0.009 Sum_probs=122.2
Q ss_pred eEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCccc
Q 022074 42 IFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPA 121 (303)
Q Consensus 42 v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~ 121 (303)
...+.+. +++..++...++.|.+||..+++...++. .......++++++ ++++++...++.|.+||.... +..
T Consensus 46 ~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~-g~lyv~~~~~~~v~~iD~~t~----~~~ 118 (328)
T 3dsm_A 46 AQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLSD-EKAYVTQIWDYRIFIINPKTY----EIT 118 (328)
T ss_dssp EEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEET-TEEEEEEBSCSEEEEEETTTT----EEE
T ss_pred ceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeCC-CeEEEEECCCCeEEEEECCCC----eEE
Confidence 5667774 34455555567899999999998877664 3466788888654 566655558999999997532 222
Q ss_pred eeecccc-----cCeEEEEeCCCCCEEEEEe-CCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCC
Q 022074 122 GVLMGHL-----EGITFIDSRGDGRYLISNG-KDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQ 195 (303)
Q Consensus 122 ~~~~~h~-----~~v~~~~~~~~~~~l~s~~-~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (303)
..+.... .....+.+ .++.++++.. .++.|.++|+......... ...
T Consensus 119 ~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i--------------~~g------------ 171 (328)
T 3dsm_A 119 GYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDEL--------------TIG------------ 171 (328)
T ss_dssp EEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEE--------------ECS------------
T ss_pred EEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEE--------------EcC------------
Confidence 2221111 12334444 3444444543 4899999998643211000 000
Q ss_pred cceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCC----------CeEEEEECCCCeEEEEeecC-CCCeEEEEECCCC
Q 022074 196 SVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHD----------SCVYVYDLVSGEQVAALKYH-TSPVRDCSWHPSQ 264 (303)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~d----------g~i~iwd~~~~~~~~~~~~h-~~~I~~v~~sp~~ 264 (303)
.. .....++++++++++...+ +.|.++|..+++....+... ......++|+|++
T Consensus 172 -------~~--------p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~ 236 (328)
T 3dsm_A 172 -------IQ--------PTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTR 236 (328)
T ss_dssp -------SC--------BCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTS
T ss_pred -------CC--------ccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCC
Confidence 00 0012256778877776554 89999999999877666533 2368999999999
Q ss_pred CeEEEEeCCCCEEEeecCCC
Q 022074 265 PMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 265 ~~las~s~Dg~i~~Wd~~~~ 284 (303)
+.|..+.. .+.+||....
T Consensus 237 ~~lyv~~~--~v~~~d~~t~ 254 (328)
T 3dsm_A 237 DTLYWINN--DIWRMPVEAD 254 (328)
T ss_dssp CEEEEESS--SEEEEETTCS
T ss_pred CEEEEEcc--EEEEEECCCC
Confidence 98877754 8999998654
No 193
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.09 E-value=6.1e-09 Score=100.48 Aligned_cols=225 Identities=11% Similarity=0.025 Sum_probs=133.8
Q ss_pred chhhccccccccccCcCcccccC-CCcccceEEEEEcCCCCEEEEeeCCCe-------------EEEEECCCCce--EEE
Q 022074 13 GTMESLANVTEIHDGLDFSAADD-GGYSFGIFSLKFSTDGRELVAGSSDDC-------------IYVYDLEANKL--SLR 76 (303)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~l~~s~~g~~l~sgs~Dg~-------------v~lwd~~~~~~--~~~ 76 (303)
|+-++-+.|++.-+|... ..+. .+. ....++|+|||+.|+.++.|.. |++|++.++.. ...
T Consensus 143 G~~~~~i~v~dl~tg~~~-~~~~~~~~--~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv 219 (695)
T 2bkl_A 143 AADEAVLHVIDVDSGEWS-KVDVIEGG--KYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVV 219 (695)
T ss_dssp TCSCCEEEEEETTTCCBC-SSCCBSCC--TTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEE
T ss_pred CCceEEEEEEECCCCCCc-CCcccCcc--cccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEE
Confidence 333456777777665432 0111 111 1267899999999999998876 99999988762 122
Q ss_pred E--ecccCCeEEEEEccCCCcEEEEecCCC----eEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEe---
Q 022074 77 I--LAHTSDVNTVCFGDESGHLIYSGSDDN----LCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNG--- 147 (303)
Q Consensus 77 ~--~~h~~~v~~l~~~~~~~~~l~s~s~dg----~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~--- 147 (303)
. ..|...+..+.|+++ +++++.++.++ .|++||.. .+ ....+..+.+.+....+ ++|.+++...
T Consensus 220 ~~~~~~~~~~~~~~~SpD-G~~l~~~~~~~~~~~~l~~~~~~----~~-~~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~ 292 (695)
T 2bkl_A 220 HERTGDPTTFLQSDLSRD-GKYLFVYILRGWSENDVYWKRPG----EK-DFRLLVKGVGAKYEVHA-WKDRFYVLTDEGA 292 (695)
T ss_dssp ECCCCCTTCEEEEEECTT-SCCEEEEEEETTTEEEEEEECTT----CS-SCEEEEECSSCCEEEEE-ETTEEEEEECTTC
T ss_pred EecCCCCEEEEEEEECCC-CCEEEEEEeCCCCceEEEEEcCC----CC-ceEEeecCCCceEEEEe-cCCcEEEEECCCC
Confidence 2 234457888999765 66666655544 66666532 12 23344455555555444 4555444444
Q ss_pred CCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEE
Q 022074 148 KDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYT 227 (303)
Q Consensus 148 ~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~lat 227 (303)
.++.|.+||+...... .| ..+..+.....+. ...++ +++++++
T Consensus 293 ~~~~l~~~d~~~~~~~----------~~----------------------~~l~~~~~~~~l~----~~~~~-~~~lv~~ 335 (695)
T 2bkl_A 293 PRQRVFEVDPAKPARA----------SW----------------------KEIVPEDSSASLL----SVSIV-GGHLSLE 335 (695)
T ss_dssp TTCEEEEEBTTBCSGG----------GC----------------------EEEECCCSSCEEE----EEEEE-TTEEEEE
T ss_pred CCCEEEEEeCCCCCcc----------CC----------------------eEEecCCCCCeEE----EEEEE-CCEEEEE
Confidence 2578888887532100 00 0000000000000 11233 5788999
Q ss_pred EeCCCeEEEEECC-CCeEEEEeecC-CCCeEEEEECCCCCeEE----EEeCCCCEEEeecCCC
Q 022074 228 GSHDSCVYVYDLV-SGEQVAALKYH-TSPVRDCSWHPSQPMLV----SSSWDGDVVRWEFPGN 284 (303)
Q Consensus 228 g~~dg~i~iwd~~-~~~~~~~~~~h-~~~I~~v~~sp~~~~la----s~s~Dg~i~~Wd~~~~ 284 (303)
...|+..++|... +++.+..+..+ ...+..++++|+++.|+ +....+++.+||+...
T Consensus 336 ~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g 398 (695)
T 2bkl_A 336 YLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTG 398 (695)
T ss_dssp EEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTC
T ss_pred EEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 9999998888664 45656666655 66788999999998666 3334578999998653
No 194
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.07 E-value=4.2e-08 Score=84.43 Aligned_cols=196 Identities=9% Similarity=0.031 Sum_probs=120.3
Q ss_pred eEEEEEcCCCCEEEE-------eeCCCeEEEEECCCCceEEEEe----cccCCeEEEEEccCCCcEEEEecCCCeEEEEc
Q 022074 42 IFSLKFSTDGRELVA-------GSSDDCIYVYDLEANKLSLRIL----AHTSDVNTVCFGDESGHLIYSGSDDNLCKVWD 110 (303)
Q Consensus 42 v~~l~~s~~g~~l~s-------gs~Dg~v~lwd~~~~~~~~~~~----~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd 110 (303)
..+++|+++|+.+++ +..++.|.+||..+++...... ++...+..+++.++.++++++.. ...|.+||
T Consensus 20 ~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~~~l~~~d 98 (314)
T 1pjx_A 20 AEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-RLGLLVVQ 98 (314)
T ss_dssp CEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-TTEEEEEE
T ss_pred ccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-CCCEEEEe
Confidence 578999999987777 6778999999988877543221 14467888998643265555554 44788898
Q ss_pred CccccCCCcc-ceeecc-cccCeEEEEeCCCCCEEEEEeCC---------------CcEEEEEcccccCCcccccCccce
Q 022074 111 RRCLNVKGKP-AGVLMG-HLEGITFIDSRGDGRYLISNGKD---------------QAIKLWDIRKMSSNASCNLGFRSY 173 (303)
Q Consensus 111 ~~~~~~~~~~-~~~~~~-h~~~v~~~~~~~~~~~l~s~~~D---------------~~v~lWdl~~~~~~~~~~~~~~~~ 173 (303)
.. .... .. .....+ ....+..+.+.++|+++++...+ +.|..||.. .. .
T Consensus 99 ~~-g~~~-~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~----~------- 164 (314)
T 1pjx_A 99 TD-GTFE-EIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQ----M------- 164 (314)
T ss_dssp TT-SCEE-ECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SC----E-------
T ss_pred CC-CCEE-EEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CC----E-------
Confidence 64 2111 00 000111 12347788899999888777654 334444321 00 0
Q ss_pred eeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeee----CCCeEE-EEEeCCCeEEEEECC-CCe----
Q 022074 174 EWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYS----TGQKYI-YTGSHDSCVYVYDLV-SGE---- 243 (303)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s----~~~~~l-atg~~dg~i~iwd~~-~~~---- 243 (303)
........ ......++ ++++.+ ++...++.|++||.. +++
T Consensus 165 -----------------------~~~~~~~~-------~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~ 214 (314)
T 1pjx_A 165 -----------------------IQVDTAFQ-------FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENK 214 (314)
T ss_dssp -----------------------EEEEEEES-------SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEE
T ss_pred -----------------------EEeccCCC-------CcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccc
Confidence 00000000 00112356 777655 444578999999976 454
Q ss_pred -EEEEeecCC-CCeEEEEECCCCCeEEEEeCCCCEEEeecC
Q 022074 244 -QVAALKYHT-SPVRDCSWHPSQPMLVSSSWDGDVVRWEFP 282 (303)
Q Consensus 244 -~~~~~~~h~-~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~ 282 (303)
....+..+. ..+..++++++|+++++...++.|.+||..
T Consensus 215 ~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~ 255 (314)
T 1pjx_A 215 KVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPD 255 (314)
T ss_dssp EEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred eEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCC
Confidence 223333443 568899999999999988888999999976
No 195
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.06 E-value=7.8e-08 Score=90.51 Aligned_cols=220 Identities=16% Similarity=0.131 Sum_probs=135.6
Q ss_pred hccccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECC--CCceEEEEecccCCeEEEEEcc--
Q 022074 16 ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLE--ANKLSLRILAHTSDVNTVCFGD-- 91 (303)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~--~~~~~~~~~~h~~~v~~l~~~~-- 91 (303)
++.+.|++.-+|.-. .....|. .+..+.|+|||+++++++.|+.|.+||+. +.+...++.. ......+++++
T Consensus 176 ~~~V~viD~~t~~v~-~~i~~g~--~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~-G~~P~~ia~s~~~ 251 (567)
T 1qks_A 176 AGQIALIDGSTYEIK-TVLDTGY--AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI-GSEARSIETSKME 251 (567)
T ss_dssp TTEEEEEETTTCCEE-EEEECSS--CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC-CSEEEEEEECCST
T ss_pred CCeEEEEECCCCeEE-EEEeCCC--CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec-CCCCceeEEcccc
Confidence 345556665444322 2222332 46689999999999999999999999996 7766665554 33467889974
Q ss_pred -CCCcEEEEec-CCCeEEEEcCccccCCCccceeec----------cccc-CeEEEEeCCCCCE-EEEEeCCCcEEEEEc
Q 022074 92 -ESGHLIYSGS-DDNLCKVWDRRCLNVKGKPAGVLM----------GHLE-GITFIDSRGDGRY-LISNGKDQAIKLWDI 157 (303)
Q Consensus 92 -~~~~~l~s~s-~dg~v~lWd~~~~~~~~~~~~~~~----------~h~~-~v~~~~~~~~~~~-l~s~~~D~~v~lWdl 157 (303)
++++++++++ .+++|.++|.... +++..+. .|.+ .+..+..++++.. +++...++.|.++|.
T Consensus 252 ~pDGk~l~v~n~~~~~v~ViD~~t~----~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~ 327 (567)
T 1qks_A 252 GWEDKYAIAGAYWPPQYVIMDGETL----EPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDY 327 (567)
T ss_dssp TCTTTEEEEEEEETTEEEEEETTTC----CEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEET
T ss_pred CCCCCEEEEEEccCCeEEEEECCCC----cEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEec
Confidence 4576666554 5689999997532 2222221 1333 4667777776555 455556789999987
Q ss_pred ccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEe-CCCeEEE
Q 022074 158 RKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGS-HDSCVYV 236 (303)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~-~dg~i~i 236 (303)
...... .+..+..... .....|++++++++++. .++.|.+
T Consensus 328 ~~~~~~--------------------------------~v~~i~~~~~-------~~d~~~~pdgr~~~va~~~sn~V~V 368 (567)
T 1qks_A 328 TDLNNL--------------------------------KTTEISAERF-------LHDGGLDGSHRYFITAANARNKLVV 368 (567)
T ss_dssp TCSSEE--------------------------------EEEEEECCSS-------EEEEEECTTSCEEEEEEGGGTEEEE
T ss_pred CCCccc--------------------------------eeeeeecccc-------ccCceECCCCCEEEEEeCCCCeEEE
Confidence 532100 0000000000 00123678888876654 6899999
Q ss_pred EECCCCeEEEEeec-----CCCCeEEEEECCC-CCeEEEEe-CCCCEEEeecCC
Q 022074 237 YDLVSGEQVAALKY-----HTSPVRDCSWHPS-QPMLVSSS-WDGDVVRWEFPG 283 (303)
Q Consensus 237 wd~~~~~~~~~~~~-----h~~~I~~v~~sp~-~~~las~s-~Dg~i~~Wd~~~ 283 (303)
+|..+++.+..+.. |.+.-..+ ++|+ +++.+++. .+++|.++|...
T Consensus 369 iD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 369 IDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp EETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred EECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCC
Confidence 99999988776654 32212122 5887 45555553 468999999764
No 196
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.06 E-value=1.2e-08 Score=89.26 Aligned_cols=215 Identities=10% Similarity=0.028 Sum_probs=131.9
Q ss_pred ccccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEee-CCCeEEEEECCCCceEEEEeccc-----CCeEEEEEc
Q 022074 17 SLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS-SDDCIYVYDLEANKLSLRILAHT-----SDVNTVCFG 90 (303)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs-~Dg~v~lwd~~~~~~~~~~~~h~-----~~v~~l~~~ 90 (303)
..+.|++.-+|.....+ . .......+++++++ .++++. .++.|.+||+.+++....+.... .....+++
T Consensus 64 ~~v~viD~~t~~~~~~i-~--~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~- 138 (328)
T 3dsm_A 64 HVIFAIDINTFKEVGRI-T--GFTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ- 138 (328)
T ss_dssp TEEEEEETTTCCEEEEE-E--CCSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-
T ss_pred CEEEEEECcccEEEEEc-C--CCCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-
Confidence 44566666555432112 1 12457889998888 455555 89999999999998765554322 14556666
Q ss_pred cCCCcEEEEec-CCCeEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCC----------CcEEEEEccc
Q 022074 91 DESGHLIYSGS-DDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKD----------QAIKLWDIRK 159 (303)
Q Consensus 91 ~~~~~~l~s~s-~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D----------~~v~lWdl~~ 159 (303)
+.+.++++.. .+++|.++|.... +....+.. ......+.+.++|++++++..+ +.|.++|...
T Consensus 139 -~~~~lyv~~~~~~~~v~viD~~t~----~~~~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t 212 (328)
T 3dsm_A 139 -YGKYVYVNCWSYQNRILKIDTETD----KVVDELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAET 212 (328)
T ss_dssp -ETTEEEEEECTTCCEEEEEETTTT----EEEEEEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTT
T ss_pred -ECCEEEEEcCCCCCEEEEEECCCC----eEEEEEEc-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCC
Confidence 2355555544 4889999997532 22222221 1234466778889877776654 7899998753
Q ss_pred ccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEEC
Q 022074 160 MSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDL 239 (303)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~ 239 (303)
.+.... ...+. +. ......++|+++.|..+.. .|++||.
T Consensus 213 ~~v~~~--------------~~~~~-----------------g~--------~p~~la~~~d~~~lyv~~~--~v~~~d~ 251 (328)
T 3dsm_A 213 FTVEKQ--------------FKFKL-----------------GD--------WPSEVQLNGTRDTLYWINN--DIWRMPV 251 (328)
T ss_dssp TEEEEE--------------EECCT-----------------TC--------CCEEEEECTTSCEEEEESS--SEEEEET
T ss_pred CeEEEE--------------EecCC-----------------CC--------CceeEEEecCCCEEEEEcc--EEEEEEC
Confidence 221000 00000 00 0112346788888877755 8999999
Q ss_pred CCCeEEE-E-eecCCCCeEEEEECC-CCCeEEEE----eCCCCEEEeecCC
Q 022074 240 VSGEQVA-A-LKYHTSPVRDCSWHP-SQPMLVSS----SWDGDVVRWEFPG 283 (303)
Q Consensus 240 ~~~~~~~-~-~~~h~~~I~~v~~sp-~~~~las~----s~Dg~i~~Wd~~~ 283 (303)
.+++... . +..+......++++| +++++++. ..++.|.+||..+
T Consensus 252 ~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~g 302 (328)
T 3dsm_A 252 EADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQG 302 (328)
T ss_dssp TCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTTC
T ss_pred CCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCCC
Confidence 8877532 1 122245789999999 56677776 6789999999763
No 197
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.06 E-value=6.2e-08 Score=82.51 Aligned_cols=114 Identities=14% Similarity=0.177 Sum_probs=84.2
Q ss_pred CcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEe--cccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccc
Q 022074 37 GYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRIL--AHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCL 114 (303)
Q Consensus 37 ~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~--~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~ 114 (303)
++...+.+++++++|+.+++...++.|++||.. ++....+. .+...+..+++.+ +++++++...++.|++||..
T Consensus 118 ~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~-- 193 (286)
T 1q7f_A 118 TILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVND-KQEIFISDNRAHCVKVFNYE-- 193 (286)
T ss_dssp TTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECS-SSEEEEEEGGGTEEEEEETT--
T ss_pred ccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECC-CCCEEEEECCCCEEEEEcCC--
Confidence 344568999999999988877788999999965 44443333 3445688999965 57788887889999999963
Q ss_pred cCCCccceeecc--cccCeEEEEeCCCCCEEEEEeCCC-cEEEEEc
Q 022074 115 NVKGKPAGVLMG--HLEGITFIDSRGDGRYLISNGKDQ-AIKLWDI 157 (303)
Q Consensus 115 ~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~~~D~-~v~lWdl 157 (303)
+.....+.. +......++++++|+++++...++ .|++||.
T Consensus 194 ---g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~ 236 (286)
T 1q7f_A 194 ---GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ 236 (286)
T ss_dssp ---CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT
T ss_pred ---CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC
Confidence 222333322 235678899999999888888886 9999985
No 198
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.04 E-value=1.5e-08 Score=97.86 Aligned_cols=202 Identities=15% Similarity=0.120 Sum_probs=118.4
Q ss_pred CcccceEEEEEcCCCCEEEE-----eeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCC-------
Q 022074 37 GYSFGIFSLKFSTDGRELVA-----GSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDN------- 104 (303)
Q Consensus 37 ~~~~~v~~l~~s~~g~~l~s-----gs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg------- 104 (303)
+|...+..++|||||++|+- |+.+.+|++||+.+++..... -+......++|+ + ++.|+.++.+.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws-D-g~~l~y~~~~~~~~~~~~ 202 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETP-LKDVKFSGISWL-G-NEGFFYSSYDKPDGSELS 202 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE-EEEEESCCCEEE-T-TTEEEEEESSCCC-----
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccc-cCCceeccEEEe-C-CCEEEEEEecCccccccc
Confidence 46678999999999998884 333357999999999854321 111112567897 4 56666666553
Q ss_pred ------eEEEEcCccccCCCccceeec--c-cccCeEEEEeCCCCCEEEEEe-C---CCcEEEEEcccccCCcccccCcc
Q 022074 105 ------LCKVWDRRCLNVKGKPAGVLM--G-HLEGITFIDSRGDGRYLISNG-K---DQAIKLWDIRKMSSNASCNLGFR 171 (303)
Q Consensus 105 ------~v~lWd~~~~~~~~~~~~~~~--~-h~~~v~~~~~~~~~~~l~s~~-~---D~~v~lWdl~~~~~~~~~~~~~~ 171 (303)
.|++|++.... ......+. . |...+..+.++++|++|+... . +..+.++|+.......
T Consensus 203 ~~~~~~~v~~~~lgt~~--~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~------- 273 (693)
T 3iuj_A 203 ARTDQHKVYFHRLGTAQ--EDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPL------- 273 (693)
T ss_dssp --CCCCEEEEEETTSCG--GGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCC-------
T ss_pred ccCCCcEEEEEECCCCc--ccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCce-------
Confidence 48999875221 11122222 2 333467788999999875433 2 2578888875421100
Q ss_pred ceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeC---CCeEEEEECCCCeE--EE
Q 022074 172 SYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSH---DSCVYVYDLVSGEQ--VA 246 (303)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~---dg~i~iwd~~~~~~--~~ 246 (303)
..+..+.... ..+..+.++++++.... .+.|..+|+.+++. ..
T Consensus 274 --------------------------~~l~~~~~~~------~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~ 321 (693)
T 3iuj_A 274 --------------------------LTVQGDLDAD------VSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWR 321 (693)
T ss_dssp --------------------------EEEECSSSSC------EEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCE
T ss_pred --------------------------EEEeCCCCce------EEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccE
Confidence 0000000000 01111223444445444 36899999987653 34
Q ss_pred EeecCCCCeEEEEECCCCCeEEEEeCCC---CEEEeecCCC
Q 022074 247 ALKYHTSPVRDCSWHPSQPMLVSSSWDG---DVVRWEFPGN 284 (303)
Q Consensus 247 ~~~~h~~~I~~v~~sp~~~~las~s~Dg---~i~~Wd~~~~ 284 (303)
.+..|...+. .|+++++.|+....++ .|++|++.+.
T Consensus 322 ~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~ 360 (693)
T 3iuj_A 322 DLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGK 360 (693)
T ss_dssp EEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSC
T ss_pred EEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCC
Confidence 4555665555 9999999777665544 6888887643
No 199
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.03 E-value=2.6e-07 Score=78.55 Aligned_cols=196 Identities=11% Similarity=0.090 Sum_probs=131.9
Q ss_pred CcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEE-ecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCcccc
Q 022074 37 GYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRI-LAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLN 115 (303)
Q Consensus 37 ~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~-~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~ 115 (303)
++...+.++.++++|+..++...++.|.+||.. +...... ..+...+..+++.+ +++++++...++.|..||..
T Consensus 12 ~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~--- 86 (299)
T 2z2n_A 12 NQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISS-DGEVWFTENAANKIGRITKK--- 86 (299)
T ss_dssp SSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECTT---
T ss_pred CcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECC-CCCEEEeCCCCCeEEEECCC---
Confidence 344568999999999977766668899999988 5543222 23456788898854 57788777778899999853
Q ss_pred CCCccceeec--ccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCC
Q 022074 116 VKGKPAGVLM--GHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPC 193 (303)
Q Consensus 116 ~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (303)
+. ...+. .....+..+.+.+++.++++...++.|..||... ... .+ ..+. .
T Consensus 87 --g~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g-~~~----------~~-----~~~~--------~ 139 (299)
T 2z2n_A 87 --GI-IKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITDDG-KIR----------EY-----ELPN--------K 139 (299)
T ss_dssp --SC-EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTC-CEE----------EE-----ECSS--------T
T ss_pred --Cc-EEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECCCC-CEE----------Ee-----cCCC--------C
Confidence 11 11121 2344678888999998888887888999998621 100 00 0000 0
Q ss_pred CCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEE-eecCCCCeEEEEECCCCCeEEEEeC
Q 022074 194 DQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAA-LKYHTSPVRDCSWHPSQPMLVSSSW 272 (303)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~-~~~h~~~I~~v~~sp~~~~las~s~ 272 (303)
. .. .....+.+++++.++...++.|..||. +++.... +..+...+..+++++++++.++...
T Consensus 140 ~---------~~-------~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~ 202 (299)
T 2z2n_A 140 G---------SY-------PSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEII 202 (299)
T ss_dssp T---------CC-------EEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETT
T ss_pred C---------CC-------CceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccC
Confidence 0 00 011224567887777777889999998 6665432 3334557899999999998888777
Q ss_pred CCCEEEeec
Q 022074 273 DGDVVRWEF 281 (303)
Q Consensus 273 Dg~i~~Wd~ 281 (303)
++.|.+|+.
T Consensus 203 ~~~i~~~~~ 211 (299)
T 2z2n_A 203 GNKIGRITT 211 (299)
T ss_dssp TTEEEEECT
T ss_pred CceEEEECC
Confidence 889999997
No 200
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.02 E-value=2.4e-07 Score=83.77 Aligned_cols=236 Identities=9% Similarity=0.064 Sum_probs=134.2
Q ss_pred ceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCC--eEEEEcCccccCCC
Q 022074 41 GIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDN--LCKVWDRRCLNVKG 118 (303)
Q Consensus 41 ~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg--~v~lWd~~~~~~~~ 118 (303)
....|+|+++|+.+++...++.|++||+.++........ ..... ++|.+ +++.|+.+..++ .|.+++..... ..
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~-~~~~~-ia~~~-~g~~l~~~d~~~~~~I~~~d~~~~~-~~ 207 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG-FKGGK-PAVTK-DKQRVYSIGWEGTHTVYVYMKASGW-AP 207 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEET-CCBCB-CEECT-TSSEEEEEBSSTTCEEEEEEGGGTT-CE
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc-CCCCc-eeEec-CCCcEEEEecCCCceEEEEEcCCCc-ee
Confidence 577899999999777777788999999998876543333 22333 88865 466777777655 78888854211 00
Q ss_pred ccceee-cccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCc-cceeeece-eeeCCCC-CccccC-CC
Q 022074 119 KPAGVL-MGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGF-RSYEWDYR-WMDYPPQ-ARDLKH-PC 193 (303)
Q Consensus 119 ~~~~~~-~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~-~~~~~~-~~ 193 (303)
.....+ .........+++++++..|+.+..++.|+.||+............. ....+... .+.+.+. ...+.. ..
T Consensus 208 ~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~ 287 (409)
T 3hrp_A 208 TRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN 287 (409)
T ss_dssp EEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT
T ss_pred EEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC
Confidence 011111 1133456778888854455557778899999976422100000000 00000000 1222221 111100 00
Q ss_pred CCcceEEecccceeee------------------EEEeeeeeeeCCCeEEEEEe-CCCeEEEEECCCCeEEEEeecC---
Q 022074 194 DQSVATYKGHSVLRTL------------------IRCHFSPVYSTGQKYIYTGS-HDSCVYVYDLVSGEQVAALKYH--- 251 (303)
Q Consensus 194 ~~~~~~~~~~~~~~~~------------------~~~~~~~~~s~~~~~latg~-~dg~i~iwd~~~~~~~~~~~~h--- 251 (303)
...+..++........ +.......+++++.++++.. .+++|+.||..+++. ..+.++
T Consensus 288 ~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v-~~~~g~~~~ 366 (409)
T 3hrp_A 288 LSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV-STVAGQVDV 366 (409)
T ss_dssp TTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE-EEEEECTTC
T ss_pred CCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE-EEEeCCCCC
Confidence 1112222111100000 00112234678898888888 899999999877774 444444
Q ss_pred ------------CCCeEEEEECCCCCeEEEEeCCCCEEEeec
Q 022074 252 ------------TSPVRDCSWHPSQPMLVSSSWDGDVVRWEF 281 (303)
Q Consensus 252 ------------~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~ 281 (303)
-.....++++|++.++++-..++.|+.+++
T Consensus 367 ~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 367 ASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp BSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 246899999999999999888888888764
No 201
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.00 E-value=4.4e-07 Score=77.09 Aligned_cols=196 Identities=12% Similarity=0.049 Sum_probs=129.9
Q ss_pred ccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEE-EEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCC
Q 022074 39 SFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSL-RILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVK 117 (303)
Q Consensus 39 ~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~-~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~ 117 (303)
...+.+++++++|+..++...++.|..||.. ++... .+......+..+++.+ +++++++...++.|..||.. .
T Consensus 56 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~~-g--- 129 (299)
T 2z2n_A 56 DAKVMCLTISSDGEVWFTENAANKIGRITKK-GIIKEYTLPNPDSAPYGITEGP-NGDIWFTEMNGNRIGRITDD-G--- 129 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECTT-C---
T ss_pred cCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEEEEeCCCcCCCceeeEECC-CCCEEEEecCCceEEEECCC-C---
Confidence 4568899999999987777778889999986 33321 1122445788888864 57788877778899999852 1
Q ss_pred Cccce-eecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCc
Q 022074 118 GKPAG-VLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQS 196 (303)
Q Consensus 118 ~~~~~-~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (303)
.... ....+...+..+.+.++++++++...++.|..||. ..... .+ ..+. .
T Consensus 130 -~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~----------~~-----~~~~---------~-- 181 (299)
T 2z2n_A 130 -KIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDIT----------EF-----KIPT---------P-- 181 (299)
T ss_dssp -CEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE----------EE-----ECSS---------T--
T ss_pred -CEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEE----------Ee-----eCCC---------C--
Confidence 1111 11223346788889999988887777889999986 21100 00 0000 0
Q ss_pred ceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEE-EeecCCCCeEEEEECCCCCeEEEEeCCCC
Q 022074 197 VATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVA-ALKYHTSPVRDCSWHPSQPMLVSSSWDGD 275 (303)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~-~~~~h~~~I~~v~~sp~~~~las~s~Dg~ 275 (303)
... .....+.+++.+.++...++.|.+||. +++... .+..+...+.+++++++++++++...++.
T Consensus 182 ------~~~-------~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~ 247 (299)
T 2z2n_A 182 ------ASG-------PVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANK 247 (299)
T ss_dssp ------TCC-------EEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTE
T ss_pred ------CCc-------ceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCce
Confidence 000 001224567787777777889999999 666432 23334567999999999998887767889
Q ss_pred EEEeecC
Q 022074 276 VVRWEFP 282 (303)
Q Consensus 276 i~~Wd~~ 282 (303)
|..||..
T Consensus 248 i~~~d~~ 254 (299)
T 2z2n_A 248 IGRLTSN 254 (299)
T ss_dssp EEEEETT
T ss_pred EEEECCC
Confidence 9999963
No 202
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.97 E-value=5e-07 Score=77.69 Aligned_cols=192 Identities=10% Similarity=0.092 Sum_probs=115.6
Q ss_pred cceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecc----cCCeEEEEEccCCCcEEEEecC---------CCeE
Q 022074 40 FGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAH----TSDVNTVCFGDESGHLIYSGSD---------DNLC 106 (303)
Q Consensus 40 ~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h----~~~v~~l~~~~~~~~~l~s~s~---------dg~v 106 (303)
..+.+++++++|+.++ +. ++.|.+||.++++........ ...++.+++.+ +++++++... ...-
T Consensus 54 ~~~~~i~~~~dG~l~v-~~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~-dG~l~~~~~~~~~~~~~~~~~~~ 130 (297)
T 3g4e_A 54 APVSSVALRQSGGYVA-TI-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDP-AGRYFAGTMAEETAPAVLERHQG 130 (297)
T ss_dssp SCEEEEEEBTTSSEEE-EE-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECT-TSCEEEEEEECCSBTTBCCTTCE
T ss_pred CceEEEEECCCCCEEE-EE-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECC-CCCEEEecCCcccccccccCCCc
Confidence 4688999999999544 44 557999999888654322211 13467888864 5776665422 1223
Q ss_pred EEEcCccccCCCccceeecccccCeEEEEeCCCCCEE-EEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCC
Q 022074 107 KVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYL-ISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQ 185 (303)
Q Consensus 107 ~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (303)
.+|.+.. .+. ...+..+....+.++++++++.| ++.+.++.|.+||+....-.... . +
T Consensus 131 ~l~~~d~---~g~-~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~----~------~------- 189 (297)
T 3g4e_A 131 ALYSLFP---DHH-VKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISN----R------R------- 189 (297)
T ss_dssp EEEEECT---TSC-EEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEE----E------E-------
T ss_pred EEEEEEC---CCC-EEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccC----c------E-------
Confidence 4444321 112 22222333446788999999865 56667889999987421100000 0 0
Q ss_pred CccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEC-CCC
Q 022074 186 ARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWH-PSQ 264 (303)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~s-p~~ 264 (303)
....+...... .....+.++|.+.++....+.|..||..+++.+..+..+...+++++|. |++
T Consensus 190 ----------~~~~~~~~~~~------p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~ 253 (297)
T 3g4e_A 190 ----------SVYKLEKEEQI------PDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNY 253 (297)
T ss_dssp ----------EEEECCGGGCE------EEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGG
T ss_pred ----------EEEECCCCCCC------CCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCC
Confidence 00000000000 0012245778888887788999999999999988888887789999998 887
Q ss_pred CeE-EEEe
Q 022074 265 PML-VSSS 271 (303)
Q Consensus 265 ~~l-as~s 271 (303)
+.| +|..
T Consensus 254 ~~L~vt~~ 261 (297)
T 3g4e_A 254 SEMYVTCA 261 (297)
T ss_dssp CEEEEEEB
T ss_pred CEEEEEcC
Confidence 754 4443
No 203
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.97 E-value=1.2e-06 Score=74.35 Aligned_cols=234 Identities=9% Similarity=0.009 Sum_probs=136.9
Q ss_pred cccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEE-EecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccC
Q 022074 38 YSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLR-ILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNV 116 (303)
Q Consensus 38 ~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~-~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~ 116 (303)
......++.+.++|+..++...++.|.+||.. ++.... +..+...+..+++. ++++++++...++.|..+|.. ...
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~-~~g~l~v~~~~~~~v~~~d~~-g~~ 94 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVS-SLGDIWFTENGANKIGKLSKK-GGF 94 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEEC-TTSCEEEEETTTTEEEEECTT-SCE
T ss_pred CCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEEC-CCCCEEEEecCCCeEEEECCC-CCe
Confidence 34568899999999977777678899999988 554321 22233568888885 457787777778899999864 211
Q ss_pred CCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCC-CC
Q 022074 117 KGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPC-DQ 195 (303)
Q Consensus 117 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 195 (303)
. ..........+..+.+.+++.++++...++.|..+|... ... ...... . ......+...+......... ..
T Consensus 95 --~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~~~-~~~~~~-~-~~~~~~i~~d~~g~l~v~~~~~~ 167 (300)
T 2qc5_A 95 --T-EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTADG-TIY-EYDLPN-K-GSYPAFITLGSDNALWFTENQNN 167 (300)
T ss_dssp --E-EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTTS-CEE-EEECSS-T-TCCEEEEEECTTSSEEEEETTTT
T ss_pred --E-EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCCC-CEE-EccCCC-C-CCCceeEEECCCCCEEEEecCCC
Confidence 1 111112335678888889998888887788999998752 111 000000 0 00001111222222111110 11
Q ss_pred cceEEecccceeeeE-----EEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEE-EeecCCCCeEEEEECCCCCeEEE
Q 022074 196 SVATYKGHSVLRTLI-----RCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVA-ALKYHTSPVRDCSWHPSQPMLVS 269 (303)
Q Consensus 196 ~~~~~~~~~~~~~~~-----~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~-~~~~h~~~I~~v~~sp~~~~las 269 (303)
.+..++......... .......+.+++.+.++....+.|.+||. +++... .+..+...+.++++++++++.++
T Consensus 168 ~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~ 246 (300)
T 2qc5_A 168 SIGRITNTGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFT 246 (300)
T ss_dssp EEEEECTTCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEE
T ss_pred eEEEECCCCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEe
Confidence 222222111000000 00112235667877777667788999998 555433 23334567899999999998888
Q ss_pred EeCCCCEEEeecC
Q 022074 270 SSWDGDVVRWEFP 282 (303)
Q Consensus 270 ~s~Dg~i~~Wd~~ 282 (303)
...++.|..++..
T Consensus 247 ~~~~~~i~~~~~~ 259 (300)
T 2qc5_A 247 EWGANQIGRITND 259 (300)
T ss_dssp ETTTTEEEEECTT
T ss_pred ccCCCeEEEECCC
Confidence 7777899999864
No 204
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.97 E-value=1.5e-07 Score=82.79 Aligned_cols=210 Identities=13% Similarity=0.034 Sum_probs=126.7
Q ss_pred CCcccceEEEEEcCCCCEEEEeeC-----CCeEEEEECCCCceEEEEec------ccCCeEEEEEccCCCcEEEEec---
Q 022074 36 GGYSFGIFSLKFSTDGRELVAGSS-----DDCIYVYDLEANKLSLRILA------HTSDVNTVCFGDESGHLIYSGS--- 101 (303)
Q Consensus 36 ~~~~~~v~~l~~s~~g~~l~sgs~-----Dg~v~lwd~~~~~~~~~~~~------h~~~v~~l~~~~~~~~~l~s~s--- 101 (303)
.+|-..+.++.++++|+..++-.. ++.|.+||+++++....+.. +...++.+++.++.+..+++-.
T Consensus 63 ~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~ 142 (343)
T 2qe8_A 63 IITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD 142 (343)
T ss_dssp CCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG
T ss_pred ccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccC
Confidence 467788999999999876555433 57899999999986554432 1235688888655566666665
Q ss_pred CCCeEEEEcCccccCCCccceeeccc-----------------------------ccCeEEEEeCCCCCEEEEEeCCCcE
Q 022074 102 DDNLCKVWDRRCLNVKGKPAGVLMGH-----------------------------LEGITFIDSRGDGRYLISNGKDQAI 152 (303)
Q Consensus 102 ~dg~v~lWd~~~~~~~~~~~~~~~~h-----------------------------~~~v~~~~~~~~~~~l~s~~~D~~v 152 (303)
.++.|.+||..... ..+.+.+| ...+..++++++++.|+.+..++.
T Consensus 143 ~~~~i~v~d~~~g~----~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~- 217 (343)
T 2qe8_A 143 DKAALIRVDLQTGL----AARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHST- 217 (343)
T ss_dssp GGCEEEEEETTTCC----EEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCS-
T ss_pred CCCeEEEEECCCCC----EEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCC-
Confidence 68899999975221 11111111 123577889999988877766553
Q ss_pred EEEEccc--ccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeC
Q 022074 153 KLWDIRK--MSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSH 230 (303)
Q Consensus 153 ~lWdl~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~ 230 (303)
++|.+.. .... . ..... +. ..+... ++.. ......++++|.++++...
T Consensus 218 ~l~~~~~~~~~~~-~--~~~~~----------------~~----~~~~~~-g~~g------~pdgia~d~~G~l~va~~~ 267 (343)
T 2qe8_A 218 SMYRIKSADLSNL-Q--LTDAE----------------LG----SKIERY-SEKP------ICDGISIDKDHNIYVGDLA 267 (343)
T ss_dssp EEEEEEHHHHTCT-T--CCHHH----------------HH----TTCEEE-EECC------SCSCEEECTTCCEEEEEGG
T ss_pred eEEEEEHHHhcCC-C--CChhh----------------hh----cceEec-ccCC------CCceEEECCCCCEEEEccC
Confidence 4554431 1100 0 00000 00 000000 0000 0001235678888899889
Q ss_pred CCeEEEEECCCCeEEEEeec-CCCCeEEEEECCCCCeEEEEeCCCCEEEee
Q 022074 231 DSCVYVYDLVSGEQVAALKY-HTSPVRDCSWHPSQPMLVSSSWDGDVVRWE 280 (303)
Q Consensus 231 dg~i~iwd~~~~~~~~~~~~-h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd 280 (303)
++.|.+||..+++....... +...+.+++|.++++++++.+..+.+.+|.
T Consensus 268 ~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~~~f~ 318 (343)
T 2qe8_A 268 HSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHSAPLN 318 (343)
T ss_dssp GTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGSGGGB
T ss_pred CCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCccccccccc
Confidence 99999999866764333322 245689999999999888887665555554
No 205
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.97 E-value=1.2e-06 Score=78.02 Aligned_cols=248 Identities=9% Similarity=-0.078 Sum_probs=136.2
Q ss_pred cccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEee----------CCCeEEEEECCCCceEEEEecc-------
Q 022074 18 LANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS----------SDDCIYVYDLEANKLSLRILAH------- 80 (303)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs----------~Dg~v~lwd~~~~~~~~~~~~h------- 80 (303)
.+.|++.-+|.-. ...+.|.. + .+.++|||++++++. .++.|.+||..+.+....+.-.
T Consensus 48 ~v~v~D~~t~~~~-~~i~~g~~-p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~ 123 (373)
T 2mad_H 48 QQWVLDAGSGSIL-GHVNGGFL-P--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDV 123 (373)
T ss_pred EEEEEECCCCeEE-EEecCCCC-C--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCcccccc
Confidence 4566666555422 33334432 3 899999999999986 3678999999987766544321
Q ss_pred cCCeEEEEEccCCCcEEEEecC--CCeEEEEcCccccCCCcccee-ecccccCeEEEEeCCCC-CEEEEEeCCCcEEEEE
Q 022074 81 TSDVNTVCFGDESGHLIYSGSD--DNLCKVWDRRCLNVKGKPAGV-LMGHLEGITFIDSRGDG-RYLISNGKDQAIKLWD 156 (303)
Q Consensus 81 ~~~v~~l~~~~~~~~~l~s~s~--dg~v~lWd~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~-~~l~s~~~D~~v~lWd 156 (303)
......++++| ++++|+.+.. +.+|.++| ... +.... +.. ... +.+.+++ +.+++...|+.+.++|
T Consensus 124 g~~p~~~~~sp-DG~~l~v~n~~~~~~v~viD-~t~----~~~~~~i~~-~~~---~~~~~~~~~~~~~~~~dg~~~~vd 193 (373)
T 2mad_H 124 GPYSWMNANTP-NNADLLFFQFAAGPAVGLVV-QGG----SSDDQLLSS-PTC---YHIHPGAPSTFYLLCAQGGLAKTD 193 (373)
T ss_pred CCCccceEECC-CCCEEEEEecCCCCeEEEEE-CCC----CEEeEEcCC-Cce---EEEEeCCCceEEEEcCCCCEEEEE
Confidence 12345778875 4777776653 57899999 733 22322 211 111 2223333 4566777899999998
Q ss_pred cccccCCcccc-----cCccceeeeceeeeCCCCC-ccccCCCCCcceEEecccc----eeee-------------EEEe
Q 022074 157 IRKMSSNASCN-----LGFRSYEWDYRWMDYPPQA-RDLKHPCDQSVATYKGHSV----LRTL-------------IRCH 213 (303)
Q Consensus 157 l~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~-------------~~~~ 213 (303)
+ ..+...... .+...+.. ...+.+.. ..+.......+..++-... .... ....
T Consensus 194 ~-~g~~~~~~~~~~~~~~~~p~~~---~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~ 269 (373)
T 2mad_H 194 H-AGGAAGAGLVGAMLTAAQNLLT---QPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGW 269 (373)
T ss_pred C-CCcEEEEEeccccccCCcceee---cceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCce
Confidence 8 432221100 00000000 00000000 0000000011111111000 0000 0000
Q ss_pred eeeeeeCCCeEEEEEeC----------CCeEEEEECCCCeEEEEeecCCCCeEEEEECCCCC-eEEEEe-CCCCEEEeec
Q 022074 214 FSPVYSTGQKYIYTGSH----------DSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQP-MLVSSS-WDGDVVRWEF 281 (303)
Q Consensus 214 ~~~~~s~~~~~latg~~----------dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~-~las~s-~Dg~i~~Wd~ 281 (303)
....++++++.+..+.. ++.|.++|..+++.+..+..- .....++|+||++ .++++. .++.+.++|.
T Consensus 270 ~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g-~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~ 348 (373)
T 2mad_H 270 QQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLG-HDVDAISVAQDGGPDLYALSAGTEVLHIYDA 348 (373)
T ss_pred EeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECC-CCcCeEEECCCCCeEEEEEcCCCCeEEEEEC
Confidence 01235677776666543 368999999999998888633 3689999999999 777777 5899999998
Q ss_pred CCC
Q 022074 282 PGN 284 (303)
Q Consensus 282 ~~~ 284 (303)
...
T Consensus 349 ~t~ 351 (373)
T 2mad_H 349 GAG 351 (373)
T ss_pred CCC
Confidence 754
No 206
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.92 E-value=3.2e-07 Score=81.79 Aligned_cols=267 Identities=13% Similarity=0.052 Sum_probs=143.9
Q ss_pred EEEEEccCchhhccccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEee----------CCCeEEEEECCCCceE
Q 022074 5 VHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS----------SDDCIYVYDLEANKLS 74 (303)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs----------~Dg~v~lwd~~~~~~~ 74 (303)
+...+.++..|+..+.|.+.-++.-. .....|.. + . +.++|||+++++++ .++.|.+||..+.+..
T Consensus 47 vyV~~~~~~~~~~~V~ViD~~t~~v~-~~I~vG~~-P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~ 122 (386)
T 3sjl_D 47 VYVNDPAHFAAVTQQFVIDGEAGRVI-GMIDGGFL-P-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPT 122 (386)
T ss_dssp EEEEECGGGCSSEEEEEEETTTTEEE-EEEEECSS-C-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEE
T ss_pred EEEEcCcccCCCCEEEEEECCCCeEE-EEEECCCC-C-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEE
Confidence 34445555555666777766444422 33334544 3 4 99999999998876 3678999999999877
Q ss_pred EEEecc-------cCCeEEEEEccCCCcEEEEecC--CCeEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEE
Q 022074 75 LRILAH-------TSDVNTVCFGDESGHLIYSGSD--DNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLIS 145 (303)
Q Consensus 75 ~~~~~h-------~~~v~~l~~~~~~~~~l~s~s~--dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 145 (303)
.++.-. ......++++++ +++++.+.. +++|.++|+... +....+.-. ... ..+....+.+++
T Consensus 123 ~~I~v~~g~r~~~g~~P~~~a~spD-Gk~lyVan~~~~~~VsVID~~t~----~vv~tI~v~--g~~-~~~P~g~~~~~~ 194 (386)
T 3sjl_D 123 ADIELPDAPRFLVGTYPWMTSLTPD-GKTLLFYQFSPAPAVGVVDLEGK----AFKRMLDVP--DCY-HIFPTAPDTFFM 194 (386)
T ss_dssp EEEEETTCCCCCBSCCGGGEEECTT-SSEEEEEECSSSCEEEEEETTTT----EEEEEEECC--SEE-EEEEEETTEEEE
T ss_pred EEEECCCccccccCCCCceEEEcCC-CCEEEEEEcCCCCeEEEEECCCC----cEEEEEECC--Ccc-eeecCCCceeEE
Confidence 665422 124567888764 666666643 689999998632 333333211 111 112223345667
Q ss_pred EeCCCcEEEEEccc-ccCCcccccCccce-eeeceeeeC-CCCCccccCCCCCcceEEecccceeeeE-EEe--------
Q 022074 146 NGKDQAIKLWDIRK-MSSNASCNLGFRSY-EWDYRWMDY-PPQARDLKHPCDQSVATYKGHSVLRTLI-RCH-------- 213 (303)
Q Consensus 146 ~~~D~~v~lWdl~~-~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-------- 213 (303)
.+.||++.+.++.. .+........+... ..-.....+ .+..+.+.......+..++......+.. +..
T Consensus 195 ~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~ 274 (386)
T 3sjl_D 195 HCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERA 274 (386)
T ss_dssp EETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHH
T ss_pred ECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceecccccccc
Confidence 77777777777754 12100000000000 000000000 1122211122222233332211100000 000
Q ss_pred --e------eeeeeCCCeEEEEEeC----------CCeEEEEECCCCeEEEEeecCCCCeEEEEECCCCC-eEEE-EeCC
Q 022074 214 --F------SPVYSTGQKYIYTGSH----------DSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQP-MLVS-SSWD 273 (303)
Q Consensus 214 --~------~~~~s~~~~~latg~~----------dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~-~las-~s~D 273 (303)
+ ...++++++.+..... .+.|.+.|.++++.+..+..- .+++.|+++||++ +|.+ ...+
T Consensus 275 ~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg-~~~~~lavs~D~~~~ly~tn~~~ 353 (386)
T 3sjl_D 275 DGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVSQDEKPLLYALSTGD 353 (386)
T ss_dssp TTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECSSSSCEEEEEETTT
T ss_pred ccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC-CCcceEEECCCCCeEEEEEcCCC
Confidence 0 1124566666665432 257999999999998887532 3789999999996 5555 4558
Q ss_pred CCEEEeecCCC
Q 022074 274 GDVVRWEFPGN 284 (303)
Q Consensus 274 g~i~~Wd~~~~ 284 (303)
+.+.++|....
T Consensus 354 ~~VsViD~~t~ 364 (386)
T 3sjl_D 354 KTLYIHDAESG 364 (386)
T ss_dssp TEEEEEETTTC
T ss_pred CeEEEEECCCC
Confidence 99999997654
No 207
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.86 E-value=1.1e-09 Score=97.64 Aligned_cols=182 Identities=12% Similarity=0.035 Sum_probs=99.1
Q ss_pred CCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCccceeeccccc
Q 022074 50 DGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLE 129 (303)
Q Consensus 50 ~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~ 129 (303)
++..+++++.||.|+.||..+|+..-++.. +.+.+..+.. ++.++++++.|+.|+.||.+..+ ..-.+..+..
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~-~g~~~v~~s~dg~l~a~d~~tG~----~~w~~~~~~~ 80 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHV-EEPAFLPDPNDGSLYTLGSKNNE----GLTKLPFTIP 80 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC------CCEEECTTTCCEEEC-----C----CSEECSCCHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEc-CCCEEEEeCCCCEEEEEECCCCc----eeeeeeccCc
Confidence 578899999999999999999987765554 3444433332 35677788899999999975322 1111111111
Q ss_pred -CeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceee
Q 022074 130 -GITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRT 208 (303)
Q Consensus 130 -~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (303)
.+.+......+..+++++.|+.++.||.+..+...... .+..
T Consensus 81 ~~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~----------------------------------~~~~--- 123 (369)
T 2hz6_A 81 ELVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLS----------------------------------SAFA--- 123 (369)
T ss_dssp HHHTTCSCC-----CCCCEEEEEEEEECCC--------------------------------------------------
T ss_pred cccccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEec----------------------------------CCCc---
Confidence 01000001134567888889999999986543211110 0000
Q ss_pred eEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEECCCC---CeEEEEeCCCCEEEeecCCC
Q 022074 209 LIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQ---PMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 209 ~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~---~~las~s~Dg~i~~Wd~~~~ 284 (303)
..++|++..+++++.|+.|+.||.++|+.+-.+..+. ....+++++. ..++.++.||.+..||....
T Consensus 124 -------~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG 193 (369)
T 2hz6_A 124 -------DSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESG 193 (369)
T ss_dssp ----------------EEEEEEEEEEECCCSSSSSCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTC
T ss_pred -------ccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCCC
Confidence 0012356678889999999999999998654443221 1223344432 55777888999999997643
No 208
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.81 E-value=1.9e-06 Score=74.01 Aligned_cols=193 Identities=13% Similarity=0.109 Sum_probs=117.0
Q ss_pred EEEEEcCCCC-EEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCccc
Q 022074 43 FSLKFSTDGR-ELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPA 121 (303)
Q Consensus 43 ~~l~~s~~g~-~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~ 121 (303)
-+..|+++++ .+++...++.|..||..++... .......+.++++.+ +++++++ . ++.|.+||...... +..
T Consensus 16 Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~--~~~~~~~~~~i~~~~-dG~l~v~-~-~~~l~~~d~~~g~~--~~~ 88 (297)
T 3g4e_A 16 ESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ--RVTMDAPVSSVALRQ-SGGYVAT-I-GTKFCALNWKEQSA--VVL 88 (297)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTTCCEE--EEECSSCEEEEEEBT-TSSEEEE-E-TTEEEEEETTTTEE--EEE
T ss_pred cCCeEECCCCEEEEEECCCCEEEEEECCCCcEE--EEeCCCceEEEEECC-CCCEEEE-E-CCeEEEEECCCCcE--EEE
Confidence 4678998655 5556667889999999887652 234456789999965 4666554 3 56888998642111 111
Q ss_pred eee-cc-cccCeEEEEeCCCCCEEEEEeCC---------CcEEEEEcccccCCcccccCccceeeeceeeeCCCCCcccc
Q 022074 122 GVL-MG-HLEGITFIDSRGDGRYLISNGKD---------QAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLK 190 (303)
Q Consensus 122 ~~~-~~-h~~~v~~~~~~~~~~~l~s~~~D---------~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (303)
... .+ ....+..+.+.++|+++++...+ ..-.+|.+....
T Consensus 89 ~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g----------------------------- 139 (297)
T 3g4e_A 89 ATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH----------------------------- 139 (297)
T ss_dssp EECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-----------------------------
T ss_pred EecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-----------------------------
Confidence 111 11 12346778889999876654332 223444332100
Q ss_pred CCCCCcceEEecccceeeeEEEeeeeeeeCCCeEE-EEEeCCCeEEEEEC--CCCeE-----EEEeecCCCCeEEEEECC
Q 022074 191 HPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYI-YTGSHDSCVYVYDL--VSGEQ-----VAALKYHTSPVRDCSWHP 262 (303)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l-atg~~dg~i~iwd~--~~~~~-----~~~~~~h~~~I~~v~~sp 262 (303)
...... ..........++++++.| ++.+.++.|++||+ .+++. ...+..+...+..+++++
T Consensus 140 -----~~~~~~------~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~ 208 (297)
T 3g4e_A 140 -----HVKKYF------DQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDA 208 (297)
T ss_dssp -----CEEEEE------EEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBT
T ss_pred -----CEEEEe------eccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECC
Confidence 000000 000111234578888765 55566899999997 45543 223333445688999999
Q ss_pred CCCeEEEEeCCCCEEEeecC
Q 022074 263 SQPMLVSSSWDGDVVRWEFP 282 (303)
Q Consensus 263 ~~~~las~s~Dg~i~~Wd~~ 282 (303)
+|++.++...++.|.+||..
T Consensus 209 ~G~lwva~~~~~~v~~~d~~ 228 (297)
T 3g4e_A 209 EGKLWVACYNGGRVIRLDPV 228 (297)
T ss_dssp TSCEEEEEETTTEEEEECTT
T ss_pred CCCEEEEEcCCCEEEEEcCC
Confidence 99988888888889999976
No 209
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.78 E-value=2.1e-06 Score=80.79 Aligned_cols=201 Identities=11% Similarity=0.092 Sum_probs=124.4
Q ss_pred CCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCccceeecccc
Q 022074 49 TDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHL 128 (303)
Q Consensus 49 ~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~ 128 (303)
+.+..+++...+++|.++|..+++...++.. ...+..+.+++ +++++++++.|+.|.+||+.. .+.+....+...
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~-g~~p~~v~~Sp-DGr~lyv~~~dg~V~viD~~~--~t~~~v~~i~~G- 239 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDT-GYAVHISRLSA-SGRYLFVIGRDGKVNMIDLWM--KEPTTVAEIKIG- 239 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEEC-SSCEEEEEECT-TSCEEEEEETTSEEEEEETTS--SSCCEEEEEECC-
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeC-CCCccceEECC-CCCEEEEEcCCCeEEEEECCC--CCCcEeEEEecC-
Confidence 3445677777899999999999987766643 34567889975 577888888999999999731 122223333221
Q ss_pred cCeEEEEeC----CCCCEEEEEe-CCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecc
Q 022074 129 EGITFIDSR----GDGRYLISNG-KDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGH 203 (303)
Q Consensus 129 ~~v~~~~~~----~~~~~l~s~~-~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (303)
.....+.++ |+|+++++++ .++++.++|...++........ .... ... .+ +
T Consensus 240 ~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~---------~~~~--~~~-----------~~--~ 295 (567)
T 1qks_A 240 SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTR---------GMTY--DEQ-----------EY--H 295 (567)
T ss_dssp SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECC---------EECT--TTC-----------CE--E
T ss_pred CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEecc---------cccc--ccc-----------cc--c
Confidence 234577888 6998887665 5699999997654322111100 0000 000 00 0
Q ss_pred cceeeeEEEeeeeeeeCC-CeEEEEEeCCCeEEEEECCCCeEE--EEeecCCCCeEEEEECCCCCeEEEEe-CCCCEEEe
Q 022074 204 SVLRTLIRCHFSPVYSTG-QKYIYTGSHDSCVYVYDLVSGEQV--AALKYHTSPVRDCSWHPSQPMLVSSS-WDGDVVRW 279 (303)
Q Consensus 204 ~~~~~~~~~~~~~~~s~~-~~~latg~~dg~i~iwd~~~~~~~--~~~~~h~~~I~~v~~sp~~~~las~s-~Dg~i~~W 279 (303)
...+ ... ...+++ ..+++...++|.|.++|....+.+ ..+ .......++.|+|++++|++++ .++.|.++
T Consensus 296 p~~r-va~----i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i-~~~~~~~d~~~~pdgr~~~va~~~sn~V~Vi 369 (567)
T 1qks_A 296 PEPR-VAA----ILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEI-SAERFLHDGGLDGSHRYFITAANARNKLVVI 369 (567)
T ss_dssp SCCC-EEE----EEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEE-ECCSSEEEEEECTTSCEEEEEEGGGTEEEEE
T ss_pred CCCc-eEE----EEEcCCCCEEEEEecCCCeEEEEecCCCccceeeee-eccccccCceECCCCCEEEEEeCCCCeEEEE
Confidence 0000 000 112333 345666678899999999765432 233 2345678999999999765544 67899999
Q ss_pred ecCCC
Q 022074 280 EFPGN 284 (303)
Q Consensus 280 d~~~~ 284 (303)
|.+..
T Consensus 370 D~~t~ 374 (567)
T 1qks_A 370 DTKEG 374 (567)
T ss_dssp ETTTT
T ss_pred ECCCC
Confidence 98754
No 210
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.75 E-value=1.2e-07 Score=84.67 Aligned_cols=106 Identities=15% Similarity=0.134 Sum_probs=85.3
Q ss_pred CcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccC
Q 022074 37 GYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNV 116 (303)
Q Consensus 37 ~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~ 116 (303)
.+.. |..++| |+++|+++ .++.|++||+.+.........|...+..+.+.++ + +++++.||+|.+||++...
T Consensus 86 ~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~-~av~~~dG~L~v~dl~~~~- 157 (388)
T 1xip_A 86 EIPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--T-LVILNSVNDLSALDLRTKS- 157 (388)
T ss_dssp ECTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--E-EEEEETTSEEEEEETTTCC-
T ss_pred eCCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCC--C-EEEEECCCCEEEEEccCCc-
Confidence 3445 999999 99999999 8899999999887655566778888998887654 2 8888999999999986221
Q ss_pred CCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEccc
Q 022074 117 KGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRK 159 (303)
Q Consensus 117 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~ 159 (303)
.. .+...|.+++|+|+| ++.|..|+++++|+...
T Consensus 158 ---~~----~~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~ 191 (388)
T 1xip_A 158 ---TK----QLAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRN 191 (388)
T ss_dssp ---EE----EEEESEEEEEECSSE--EEEEETTSCEEEEEEET
T ss_pred ---cc----cccCCceEEEEcCCc--eEEEEcCCcEEEEcCCC
Confidence 11 255689999999999 67899999999997654
No 211
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.71 E-value=1.7e-06 Score=76.95 Aligned_cols=259 Identities=8% Similarity=-0.097 Sum_probs=139.1
Q ss_pred EEEEEccCchhhccccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEee----------CCCeEEEEECCCCceE
Q 022074 5 VHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS----------SDDCIYVYDLEANKLS 74 (303)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs----------~Dg~v~lwd~~~~~~~ 74 (303)
+.+.+-+.++|---+.|.+.-++. .....+.|+. + .+.++|||++++++. .+++|.+||+.+++..
T Consensus 34 ~yV~~~~~~~~~d~vsvID~~t~~-v~~~i~vG~~-P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv 109 (368)
T 1mda_H 34 SHITLPAYFAGTTENWVSCAGCGV-TLGHSLGAFL-S--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPI 109 (368)
T ss_dssp EEEEECTTTCSSEEEEEEETTTTE-EEEEEEECTT-C--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEE
T ss_pred EEEECCccCCccceEEEEECCCCe-EEEEEeCCCC-C--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEE
Confidence 556666666553345565543333 2233445554 4 799999999999986 3688999999999988
Q ss_pred EEEecc-------cCCeEEEEEccCCCcEEEEecC--CCeEEE--EcCccccCCCccceeecccccCeEEEEeCCC-CCE
Q 022074 75 LRILAH-------TSDVNTVCFGDESGHLIYSGSD--DNLCKV--WDRRCLNVKGKPAGVLMGHLEGITFIDSRGD-GRY 142 (303)
Q Consensus 75 ~~~~~h-------~~~v~~l~~~~~~~~~l~s~s~--dg~v~l--Wd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~ 142 (303)
.++... ......++++|+ +++++.+.. +..|.+ +|... ...+.- .+.+ .+.++ ...
T Consensus 110 ~~I~v~~~~~~~~g~~P~~ia~SpD-Gk~lyVan~~~~~~v~V~~iD~~t-------v~~i~v-~~~~---~~~p~g~~~ 177 (368)
T 1mda_H 110 ADIELPDAPRFSVGPRVHIIGNCAS-SACLLFFLFGSSAAAGLSVPGASD-------DQLTKS-ASCF---HIHPGAAAT 177 (368)
T ss_dssp EEEEETTSCSCCBSCCTTSEEECTT-SSCEEEEECSSSCEEEEEETTTEE-------EEEEEC-SSCC---CCEEEETTE
T ss_pred EEEECCCccccccCCCcceEEEcCC-CCEEEEEccCCCCeEEEEEEchhh-------ceEEEC-CCce---EEccCCCeE
Confidence 776533 123457888764 666666654 457888 99752 111110 0111 01122 234
Q ss_pred EEEEeCCCcEEEEEccc-----ccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEeccc----ceee-----
Q 022074 143 LISNGKDQAIKLWDIRK-----MSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHS----VLRT----- 208 (303)
Q Consensus 143 l~s~~~D~~v~lWdl~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~----- 208 (303)
+++.+.|+.+.+.|+.. .+...... ......-... ..+.....+.... ..+..++-.. ....
T Consensus 178 ~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t-~~i~vg~~P~--~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~ 253 (368)
T 1mda_H 178 HYLGSCPASLAASDLAAAPAAAGIVGAQCT-GAQNCSSQAA--QANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNE 253 (368)
T ss_dssp EECCCCTTSCEEEECCSSCCCCEECCCCSC-TTSCBCSCCE--EETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSC
T ss_pred EEEEcCCCCEEEEECccccccCCeEEEEee-eeeeCCCCcc--ccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEecc
Confidence 45555677777777654 11110000 0000000000 0011111011111 1122111100 0000
Q ss_pred --------eEEEeeeeeeeCCCeEEEEEeC---------CCeEEEEECCCCeEEEEeecCCCCeEEEEECCCCC-eEEEE
Q 022074 209 --------LIRCHFSPVYSTGQKYIYTGSH---------DSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQP-MLVSS 270 (303)
Q Consensus 209 --------~~~~~~~~~~s~~~~~latg~~---------dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~-~las~ 270 (303)
.........++++++.+..+.. ++.+.++|..+++.+..+.... ..+.++|+||++ .+++.
T Consensus 254 ~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~ 332 (368)
T 1mda_H 254 SGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYAN 332 (368)
T ss_dssp THHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEE
T ss_pred ccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEc
Confidence 0000000236788777665533 2356699999999888876544 589999999997 56677
Q ss_pred e-CCCCEEEeecCCC
Q 022074 271 S-WDGDVVRWEFPGN 284 (303)
Q Consensus 271 s-~Dg~i~~Wd~~~~ 284 (303)
. .++++.++|.+..
T Consensus 333 ~~~~~~VsVID~~t~ 347 (368)
T 1mda_H 333 SAGTEVLDIYDAASD 347 (368)
T ss_dssp ETTTTEEEEEESSSC
T ss_pred cCCCCeEEEEECCCC
Confidence 6 5999999998754
No 212
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.71 E-value=7.6e-07 Score=86.44 Aligned_cols=220 Identities=14% Similarity=0.097 Sum_probs=127.4
Q ss_pred cccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEeeCCCe--------------EEEEECCCCce--EEEEec--
Q 022074 18 LANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDC--------------IYVYDLEANKL--SLRILA-- 79 (303)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~--------------v~lwd~~~~~~--~~~~~~-- 79 (303)
-+.|+++-+|.... +..+...+..++|+|| +.|+.++.|+. |++|++.++.. ...+..
T Consensus 190 ~i~v~dl~tg~~~~---~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~ 265 (741)
T 1yr2_A 190 TVKFVGVADGKPLA---DELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPE 265 (741)
T ss_dssp EEEEEETTTCCEEE---EEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTT
T ss_pred EEEEEECCCCCCCC---ccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCC
Confidence 45666654443221 1112222357899999 99988887664 89999987752 222222
Q ss_pred ccCCeEEEEEccCCCcEEEEecCC-----CeEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCC----C
Q 022074 80 HTSDVNTVCFGDESGHLIYSGSDD-----NLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKD----Q 150 (303)
Q Consensus 80 h~~~v~~l~~~~~~~~~l~s~s~d-----g~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D----~ 150 (303)
+...+..+.|++ +++.++..+.+ ..|++||+.... ......+..+.+.+... +.++|..|+..+.+ .
T Consensus 266 ~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~~l~~~d~~~~~--~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~ 341 (741)
T 1yr2_A 266 LPKRGHGASVSS-DGRWVVITSSEGTDPVNTVHVARVTNGK--IGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLK 341 (741)
T ss_dssp CTTCEEEEEECT-TSCEEEEEEECTTCSCCEEEEEEEETTE--ECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTC
T ss_pred CCeEEEEEEECC-CCCEEEEEEEccCCCcceEEEEECCCCC--CcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCC
Confidence 223578889975 56666655543 389999975220 01133444455444443 23778888776653 4
Q ss_pred cEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeC
Q 022074 151 AIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSH 230 (303)
Q Consensus 151 ~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~ 230 (303)
.|.+||+.... . .+. . .+..+.. .+. ...++ ++.++++...
T Consensus 342 ~l~~~d~~~~~--~---------~~~----~-----------------l~~~~~~---~l~---~~~~~-~~~lv~~~~~ 382 (741)
T 1yr2_A 342 KIVRVDLSGST--P---------RFD----T-----------------VVPESKD---NLE---SVGIA-GNRLFASYIH 382 (741)
T ss_dssp EEEEEECSSSS--C---------EEE----E-----------------EECCCSS---EEE---EEEEE-BTEEEEEEEE
T ss_pred EEEEEeCCCCc--c---------ccE----E-----------------EecCCCC---eEE---EEEEE-CCEEEEEEEE
Confidence 48888865311 0 000 0 0000000 000 01122 4678888899
Q ss_pred CCeEEEEECC-CCeEEEEeecC-CCCeEEEEECCCCCeEE----EEeCCCCEEEeecCCC
Q 022074 231 DSCVYVYDLV-SGEQVAALKYH-TSPVRDCSWHPSQPMLV----SSSWDGDVVRWEFPGN 284 (303)
Q Consensus 231 dg~i~iwd~~-~~~~~~~~~~h-~~~I~~v~~sp~~~~la----s~s~Dg~i~~Wd~~~~ 284 (303)
|+..++|... +++.+..+..+ ...+..++++|+++.|+ +....+++.+||+.+.
T Consensus 383 dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg 442 (741)
T 1yr2_A 383 DAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATA 442 (741)
T ss_dssp TTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTT
T ss_pred CCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 9987777554 45666666543 56789999999998655 3334588999998653
No 213
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.69 E-value=3.1e-06 Score=72.91 Aligned_cols=188 Identities=11% Similarity=0.056 Sum_probs=112.6
Q ss_pred eEEEEEcCCCC-EEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCcc
Q 022074 42 IFSLKFSTDGR-ELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKP 120 (303)
Q Consensus 42 v~~l~~s~~g~-~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~ 120 (303)
.....|+++|+ .++++..++.|..|+. ++. ...+..+...++.+++.+ +++++++...++.|.+||.. . .
T Consensus 47 ~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~-dG~l~v~~~~~~~v~~~~~~-g----~- 117 (305)
T 3dr2_A 47 SEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDA-QQRLVHCEHGRRAITRSDAD-G----Q- 117 (305)
T ss_dssp EEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECT-TSCEEEEETTTTEEEEECTT-S----C-
T ss_pred ccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECC-CCCEEEEECCCCEEEEECCC-C----C-
Confidence 56788999999 5666667889999998 444 334455666788999965 57777666667889999853 1 1
Q ss_pred ceeec----cc-ccCeEEEEeCCCCCEEEEE----eC-------------CCcEEEEEcccccCCcccccCccceeeece
Q 022074 121 AGVLM----GH-LEGITFIDSRGDGRYLISN----GK-------------DQAIKLWDIRKMSSNASCNLGFRSYEWDYR 178 (303)
Q Consensus 121 ~~~~~----~h-~~~v~~~~~~~~~~~l~s~----~~-------------D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~ 178 (303)
...+. +. ...+..+.+.++|++++|- .. .+.|..+|....
T Consensus 118 ~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g------------------ 179 (305)
T 3dr2_A 118 AHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGS------------------ 179 (305)
T ss_dssp EEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSC------------------
T ss_pred EEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCC------------------
Confidence 11121 11 1235567788888877762 21 122333332110
Q ss_pred eeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCC------CeEEEEECCCCeEEE---Ee-
Q 022074 179 WMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHD------SCVYVYDLVSGEQVA---AL- 248 (303)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~d------g~i~iwd~~~~~~~~---~~- 248 (303)
.+....+ ........++++++.|+.+... +.|++||+..+. +. .+
T Consensus 180 -----------------~~~~~~~-------~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~ 234 (305)
T 3dr2_A 180 -----------------PLQRMAD-------LDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFA 234 (305)
T ss_dssp -----------------CCEEEEE-------ESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEE
T ss_pred -----------------cEEEEec-------CCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEE
Confidence 0000000 0001123578899877777665 789999987554 21 11
Q ss_pred ecCCCCeEEEEECCCCCeEEEEeCCCCEEEeecCC
Q 022074 249 KYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPG 283 (303)
Q Consensus 249 ~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~ 283 (303)
.........++++++|++.++. .+| |.+|+..+
T Consensus 235 ~~~~~~pdgi~~d~~G~lwv~~-~~g-v~~~~~~g 267 (305)
T 3dr2_A 235 SVPDGLPDGFCVDRGGWLWSSS-GTG-VCVFDSDG 267 (305)
T ss_dssp CCSSSCCCSEEECTTSCEEECC-SSE-EEEECTTS
T ss_pred ECCCCCCCeEEECCCCCEEEec-CCc-EEEECCCC
Confidence 1223445678999999965555 444 88898654
No 214
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.67 E-value=8.9e-06 Score=70.86 Aligned_cols=194 Identities=11% Similarity=-0.019 Sum_probs=115.5
Q ss_pred eEEEEEcCCCC-EEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCcc
Q 022074 42 IFSLKFSTDGR-ELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKP 120 (303)
Q Consensus 42 v~~l~~s~~g~-~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~ 120 (303)
..+..|+++++ .+++...++.|..||.+++.... + .....+.++++.++ ++++++. .+ .|.+||...... ..
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~-~~~~~v~~i~~~~d-g~l~v~~-~~-gl~~~d~~~g~~--~~ 123 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKTV-H-ALPFMGSALAKISD-SKQLIAS-DD-GLFLRDTATGVL--TL 123 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEE-E-ECSSCEEEEEEEET-TEEEEEE-TT-EEEEEETTTCCE--EE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEE-E-ECCCcceEEEEeCC-CeEEEEE-CC-CEEEEECCCCcE--EE
Confidence 35678999755 55566678899999998876432 2 33467899999654 6666554 34 488898642211 01
Q ss_pred ceeec-cc-ccCeEEEEeCCCCCEEEEEeCC----CcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCC
Q 022074 121 AGVLM-GH-LEGITFIDSRGDGRYLISNGKD----QAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCD 194 (303)
Q Consensus 121 ~~~~~-~h-~~~v~~~~~~~~~~~l~s~~~D----~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (303)
..... +. ...+..+.++++|+++++...+ ....||.+... ..
T Consensus 124 ~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~~g----~~---------------------------- 171 (326)
T 2ghs_A 124 HAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKG----KV---------------------------- 171 (326)
T ss_dssp EECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETT----EE----------------------------
T ss_pred EeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEeCC----cE----------------------------
Confidence 11110 11 2347788899999877655422 23444443210 00
Q ss_pred CcceEEecccceeeeEEEeeeeeeeCCCeEEEE-EeCCCeEEEEECC--CC-e-----EEEEeecCCCCeEEEEECCCCC
Q 022074 195 QSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYT-GSHDSCVYVYDLV--SG-E-----QVAALKYHTSPVRDCSWHPSQP 265 (303)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~lat-g~~dg~i~iwd~~--~~-~-----~~~~~~~h~~~I~~v~~sp~~~ 265 (303)
..+... ......+.++++++.++. ...++.|++||.. ++ + ....+......+..++++++|+
T Consensus 172 ---~~~~~~------~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~ 242 (326)
T 2ghs_A 172 ---TKLFAD------ISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGH 242 (326)
T ss_dssp ---EEEEEE------ESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSC
T ss_pred ---EEeeCC------CcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCC
Confidence 000000 000112346788876544 4567899999985 55 3 2223333345678999999999
Q ss_pred eEEEEeCCCCEEEeecCC
Q 022074 266 MLVSSSWDGDVVRWEFPG 283 (303)
Q Consensus 266 ~las~s~Dg~i~~Wd~~~ 283 (303)
+.++...++.|.+|+..+
T Consensus 243 lwva~~~~~~v~~~d~~g 260 (326)
T 2ghs_A 243 IWNARWGEGAVDRYDTDG 260 (326)
T ss_dssp EEEEEETTTEEEEECTTC
T ss_pred EEEEEeCCCEEEEECCCC
Confidence 888877778899998743
No 215
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.65 E-value=3.8e-05 Score=64.96 Aligned_cols=229 Identities=7% Similarity=-0.041 Sum_probs=130.5
Q ss_pred ccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEE-EEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCC
Q 022074 39 SFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSL-RILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVK 117 (303)
Q Consensus 39 ~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~-~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~ 117 (303)
...+.++.+.++|+..++...++.|..||.. ++... ........+..+++.+ +++++++...++.|..+|.. .
T Consensus 61 ~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g--- 134 (300)
T 2qc5_A 61 DAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGL-NGDIWFTQLNGDRIGKLTAD-G--- 134 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECS-TTCEEEEETTTTEEEEECTT-S---
T ss_pred CCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECC-CCCEEEEccCCCeEEEECCC-C---
Confidence 3568899999999877776667889999988 55432 1222345688888864 57788777778899999864 1
Q ss_pred Cccce-eecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCC-CCC
Q 022074 118 GKPAG-VLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHP-CDQ 195 (303)
Q Consensus 118 ~~~~~-~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 195 (303)
.... .+......+..+.+.++++++++...++.|..+|....... ..... ... ....+...+........ ...
T Consensus 135 -~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~~--~~~~~-~~~-~~~~i~~d~~g~l~v~~~~~~ 209 (300)
T 2qc5_A 135 -TIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITNTGKLEE--YPLPT-NAA-APVGITSGNDGALWFVEIMGN 209 (300)
T ss_dssp -CEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEE--EECSS-TTC-CEEEEEECTTSSEEEEETTTT
T ss_pred -CEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECCCCcEEE--eeCCC-CCC-CcceEEECCCCCEEEEccCCC
Confidence 1111 12223346788889999997777777888999987321100 00000 000 00111112221111111 111
Q ss_pred cceEEecccceeee-----EEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEE-EEeecCCCCeEEEEECCCCCeEEE
Q 022074 196 SVATYKGHSVLRTL-----IRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQV-AALKYHTSPVRDCSWHPSQPMLVS 269 (303)
Q Consensus 196 ~~~~~~~~~~~~~~-----~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~-~~~~~h~~~I~~v~~sp~~~~las 269 (303)
.+..++........ ........+.+++++.++...++.|..+|. +++.. ..+......+.+++++++|++.++
T Consensus 210 ~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~ 288 (300)
T 2qc5_A 210 KIGRITTTGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDGSVWFA 288 (300)
T ss_dssp EEEEECTTCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTSCEEEE
T ss_pred EEEEEcCCCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECC-CCcEEEEECCccCCccceeEeCCCCCEEEE
Confidence 22222211100000 000112335677887777667799999998 45543 223334567899999999997777
Q ss_pred EeCCCCEEEeec
Q 022074 270 SSWDGDVVRWEF 281 (303)
Q Consensus 270 ~s~Dg~i~~Wd~ 281 (303)
.. + .|..++.
T Consensus 289 ~~-~-~i~~~~p 298 (300)
T 2qc5_A 289 LK-C-KIGKLNL 298 (300)
T ss_dssp CS-S-EEEEEEE
T ss_pred cc-C-ceEEeCC
Confidence 65 4 6666664
No 216
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.63 E-value=1.1e-05 Score=72.94 Aligned_cols=228 Identities=11% Similarity=0.059 Sum_probs=129.7
Q ss_pred CCCCEEEEeeCC-----CeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEec----------CCCeEEEEcCcc
Q 022074 49 TDGRELVAGSSD-----DCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGS----------DDNLCKVWDRRC 113 (303)
Q Consensus 49 ~~g~~l~sgs~D-----g~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s----------~dg~v~lWd~~~ 113 (303)
++++++++.... ++|.++|+.+.+...++..-..+ .++++|+ ++.++.+. .++.|.++|...
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpD-gk~lyVan~~~~~~~~G~~~~~VsviD~~t 158 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAED-GSFFAQASTVFERIARGKRTDYVEVFDPVT 158 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTT-SSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCC-CCEEEEEeccccccccCCCCCEEEEEECCC
Confidence 577777776553 69999999999988777654444 7889765 55555444 467899999763
Q ss_pred ccCCCccceeec-c------cccCeEEEEeCCCCCEEEEEeC--CCcEEEEEcccccCCcccccCccc----------ee
Q 022074 114 LNVKGKPAGVLM-G------HLEGITFIDSRGDGRYLISNGK--DQAIKLWDIRKMSSNASCNLGFRS----------YE 174 (303)
Q Consensus 114 ~~~~~~~~~~~~-~------h~~~v~~~~~~~~~~~l~s~~~--D~~v~lWdl~~~~~~~~~~~~~~~----------~~ 174 (303)
. +....+. + ....-..+.+++||++++.++. ++.|.+.|+...+.......+... ..
T Consensus 159 ~----~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~ 234 (426)
T 3c75_H 159 F----LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYM 234 (426)
T ss_dssp C----CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEE
T ss_pred C----cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEE
Confidence 2 2232221 1 0122345678999999988774 578999998865433222211000 00
Q ss_pred ee----ceeeeC-------------CC-------------CCccc-cCCCCCcceEEecccceeeeE-E-----------
Q 022074 175 WD----YRWMDY-------------PP-------------QARDL-KHPCDQSVATYKGHSVLRTLI-R----------- 211 (303)
Q Consensus 175 ~~----~~~~~~-------------~~-------------~~~~~-~~~~~~~~~~~~~~~~~~~~~-~----------- 211 (303)
.. ...... .. ....+ .......+..++......... .
T Consensus 235 ~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~ 314 (426)
T 3c75_H 235 NCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERAD 314 (426)
T ss_dssp EETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGG
T ss_pred EcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeecccccccc
Confidence 00 000011 00 00000 000000111111100000000 0
Q ss_pred -----EeeeeeeeCCCeEEEEEeC----------CCeEEEEECCCCeEEEEeecCCCCeEEEEECCCCC-eEEEEe-CCC
Q 022074 212 -----CHFSPVYSTGQKYIYTGSH----------DSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQP-MLVSSS-WDG 274 (303)
Q Consensus 212 -----~~~~~~~s~~~~~latg~~----------dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~-~las~s-~Dg 274 (303)
......++++++.+..... ++.|.+.|..+++.+.++..-. ..+.++|+||++ .++++. .++
T Consensus 315 g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~-~P~gia~spDg~~~lyv~n~~s~ 393 (426)
T 3c75_H 315 DWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH-EIDSINVSQDAEPLLYALSAGTQ 393 (426)
T ss_dssp TEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-EECEEEECCSSSCEEEEEETTTT
T ss_pred ccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC-CcCeEEEccCCCEEEEEEcCCCC
Confidence 0001245677665555432 3579999999999988886432 589999999998 888887 599
Q ss_pred CEEEeecCCC
Q 022074 275 DVVRWEFPGN 284 (303)
Q Consensus 275 ~i~~Wd~~~~ 284 (303)
.+.++|....
T Consensus 394 ~VsVID~~t~ 403 (426)
T 3c75_H 394 TLHIYDAATG 403 (426)
T ss_dssp EEEEEETTTC
T ss_pred eEEEEECCCC
Confidence 9999998754
No 217
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.63 E-value=2.7e-05 Score=67.77 Aligned_cols=189 Identities=17% Similarity=0.147 Sum_probs=111.4
Q ss_pred cceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecc-----cCCeEEEEEccCCCcEEEEecCC----CeEEEEc
Q 022074 40 FGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAH-----TSDVNTVCFGDESGHLIYSGSDD----NLCKVWD 110 (303)
Q Consensus 40 ~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h-----~~~v~~l~~~~~~~~~l~s~s~d----g~v~lWd 110 (303)
..+.++.++++|+.+++ +.++ |.+||..+++... +... ...++.+++.+ +++++++...+ +...||.
T Consensus 90 ~~v~~i~~~~dg~l~v~-~~~g-l~~~d~~~g~~~~-~~~~~~~~~~~~~~~i~~d~-~G~l~v~~~~~~~~~~~~~l~~ 165 (326)
T 2ghs_A 90 FMGSALAKISDSKQLIA-SDDG-LFLRDTATGVLTL-HAELESDLPGNRSNDGRMHP-SGALWIGTMGRKAETGAGSIYH 165 (326)
T ss_dssp SCEEEEEEEETTEEEEE-ETTE-EEEEETTTCCEEE-EECSSTTCTTEEEEEEEECT-TSCEEEEEEETTCCTTCEEEEE
T ss_pred CcceEEEEeCCCeEEEE-ECCC-EEEEECCCCcEEE-EeeCCCCCCCCCCCCEEECC-CCCEEEEeCCCcCCCCceEEEE
Confidence 46889999999986665 4454 9999998887543 3221 13578888865 56666654321 2334443
Q ss_pred CccccCCCccceeecccccCeEEEEeCCCCCEE-EEEeCCCcEEEEEcc--cc-cCCcccccCccceeeeceeeeCCCCC
Q 022074 111 RRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYL-ISNGKDQAIKLWDIR--KM-SSNASCNLGFRSYEWDYRWMDYPPQA 186 (303)
Q Consensus 111 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~D~~v~lWdl~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (303)
+. .+. ...+..+......+.++++++.+ ++.+.++.|.+||+. .. .... .+ .+
T Consensus 166 ~~----~g~-~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~-----~~--~~----------- 222 (326)
T 2ghs_A 166 VA----KGK-VTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGK-----AE--VF----------- 222 (326)
T ss_dssp EE----TTE-EEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSC-----CE--EE-----------
T ss_pred Ee----CCc-EEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccC-----ce--EE-----------
Confidence 32 111 11222233446688899999866 455567899999975 11 1000 00 00
Q ss_pred ccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEC-CCCC
Q 022074 187 RDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWH-PSQP 265 (303)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~s-p~~~ 265 (303)
..+..... .. ....+.+++.+.++...++.|.+||. +++.+..+..+...+++++|+ |+++
T Consensus 223 -----------~~~~~~~~---~p---~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~ 284 (326)
T 2ghs_A 223 -----------IDSTGIKG---GM---DGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDAS 284 (326)
T ss_dssp -----------EECTTSSS---EE---EEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSC
T ss_pred -----------EECCCCCC---CC---CeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCC
Confidence 00000000 00 01124567777777667789999998 577777777777789999998 8887
Q ss_pred eE-EEEeCC
Q 022074 266 ML-VSSSWD 273 (303)
Q Consensus 266 ~l-as~s~D 273 (303)
.| ++...+
T Consensus 285 ~L~vt~~~~ 293 (326)
T 2ghs_A 285 RLLVTSARE 293 (326)
T ss_dssp EEEEEEBCT
T ss_pred EEEEEecCC
Confidence 55 444433
No 218
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.58 E-value=1.8e-05 Score=67.99 Aligned_cols=186 Identities=12% Similarity=0.106 Sum_probs=111.3
Q ss_pred ccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEeccc-----CCeEEEEEccCCCcEEEE----ecC-------
Q 022074 39 SFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHT-----SDVNTVCFGDESGHLIYS----GSD------- 102 (303)
Q Consensus 39 ~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~-----~~v~~l~~~~~~~~~l~s----~s~------- 102 (303)
...+.++.++++|+.+++...++.|.+|+.+ ++.. .+..+. ..++.+++.+ ++++++| |..
T Consensus 85 ~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~-~~~~~~~~~~~~~~~~i~~d~-dG~l~~td~~~g~~~~~~~~~ 161 (305)
T 3dr2_A 85 TAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAH-LLVGRYAGKRLNSPNDLIVAR-DGAIWFTDPPFGLRKPSQGCP 161 (305)
T ss_dssp CSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-EEECEETTEECSCCCCEEECT-TSCEEEECCSGGGSCGGGSCC
T ss_pred CCccceeeECCCCCEEEEECCCCEEEEECCC-CCEE-EEEeccCCCccCCCCCEEECC-CCCEEEeCcCCCccccccccc
Confidence 3458899999999966665566789999986 5432 222211 2456788864 5778876 432
Q ss_pred ------CCeEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCC------CcEEEEEcccccCCcccccCc
Q 022074 103 ------DNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKD------QAIKLWDIRKMSSNASCNLGF 170 (303)
Q Consensus 103 ------dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D------~~v~lWdl~~~~~~~~~~~~~ 170 (303)
.+.|..+|... ++ ...+. .......++++++++.|+.+... +.|.+||+.... ....
T Consensus 162 ~~~~~~~~~v~~~d~~~----g~-~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~---- 230 (305)
T 3dr2_A 162 ADPELAHHSVYRLPPDG----SP-LQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDR---- 230 (305)
T ss_dssp CCCSSSCEEEEEECSSS----CC-CEEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEE----
T ss_pred cccccCCCeEEEEcCCC----Cc-EEEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCC----
Confidence 24567777531 22 22222 33456778899999977766654 688888875321 0000
Q ss_pred cceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEeec
Q 022074 171 RSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKY 250 (303)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~ 250 (303)
+ .+ .... .+.. ....+.++|.+.+ +..+ .|.+||. .++.+..+..
T Consensus 231 ~--~~----~~~~-----------------~~~p---------dgi~~d~~G~lwv-~~~~-gv~~~~~-~g~~~~~~~~ 275 (305)
T 3dr2_A 231 R--HF----ASVP-----------------DGLP---------DGFCVDRGGWLWS-SSGT-GVCVFDS-DGQLLGHIPT 275 (305)
T ss_dssp E--EE----ECCS-----------------SSCC---------CSEEECTTSCEEE-CCSS-EEEEECT-TSCEEEEEEC
T ss_pred e--EE----EECC-----------------CCCC---------CeEEECCCCCEEE-ecCC-cEEEECC-CCCEEEEEEC
Confidence 0 00 0000 0000 0112346677444 4444 4999998 5777777766
Q ss_pred CCCCeEEEEECCCCCeEEEEeCCC
Q 022074 251 HTSPVRDCSWHPSQPMLVSSSWDG 274 (303)
Q Consensus 251 h~~~I~~v~~sp~~~~las~s~Dg 274 (303)
+. .+..++|+|+++.|..++.++
T Consensus 276 ~~-~~~~~~f~~d~~~L~it~~~~ 298 (305)
T 3dr2_A 276 PG-TASNCTFDQAQQRLFITGGPC 298 (305)
T ss_dssp SS-CCCEEEECTTSCEEEEEETTE
T ss_pred CC-ceeEEEEeCCCCEEEEEcCCe
Confidence 55 589999999998777776654
No 219
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.54 E-value=2.4e-08 Score=89.05 Aligned_cols=195 Identities=13% Similarity=0.124 Sum_probs=95.6
Q ss_pred hhhccccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccC-CeEE-EEEcc
Q 022074 14 TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTS-DVNT-VCFGD 91 (303)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~-~v~~-l~~~~ 91 (303)
+.|..+..++.-+|...-... . .++.+..+..+++.+++++.||.|+.||..+|+...++..+.. .+.. ...
T Consensus 16 s~dg~v~a~d~~tG~~~W~~~-~---~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~-- 89 (369)
T 2hz6_A 16 TLDGSLHAVSKRTGSIKWTLK-E---DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCR-- 89 (369)
T ss_dssp ETTSEEEEEETTTCCEEEEEE-C---CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC--
T ss_pred cCCCEEEEEECCCCCEEEEec-C---CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceE--
Confidence 345566667766666321101 0 2344444556787888889999999999988876544433321 1110 011
Q ss_pred CCCcEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCcc
Q 022074 92 ESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFR 171 (303)
Q Consensus 92 ~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~ 171 (303)
..+..+++++.|+.++.||.+..+ ..-.+..+. ...+++++..+++++.|+.|+.||.+..+.......
T Consensus 90 ~~~~~v~~g~~dg~v~a~D~~tG~----~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~--- 158 (369)
T 2hz6_A 90 SSDGILYMGKKQDIWYVIDLLTGE----KQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATY--- 158 (369)
T ss_dssp -----CCCCEEEEEEEEECCC------------------------------EEEEEEEEEEECCCSSSSSCCCEEEE---
T ss_pred ecCCEEEEEeCCCEEEEEECCCCc----EEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEec---
Confidence 123467788889999999976332 222222221 122345777899999999999999875432211100
Q ss_pred ceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCC---CeEEEEEeCCCeEEEEECCCCeEEEEe
Q 022074 172 SYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTG---QKYIYTGSHDSCVYVYDLVSGEQVAAL 248 (303)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~---~~~latg~~dg~i~iwd~~~~~~~~~~ 248 (303)
. ....+.+..+ ...+++++.||.++.||..+|+.+-.+
T Consensus 159 -------------------------------~--------~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~ 199 (369)
T 2hz6_A 159 -------------------------------F--------DYAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQ 199 (369)
T ss_dssp -------------------------------E--------EECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEE
T ss_pred -------------------------------c--------cccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEe
Confidence 0 0011112221 134667889999999999999987666
Q ss_pred ecCCCCeE-EEEECCCCC
Q 022074 249 KYHTSPVR-DCSWHPSQP 265 (303)
Q Consensus 249 ~~h~~~I~-~v~~sp~~~ 265 (303)
+ ...++. ...+++++.
T Consensus 200 ~-~~~pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 200 N-YASPVVAFYVWQREGL 216 (369)
T ss_dssp E-CSSCEEEEEECTTSSC
T ss_pred c-CCCceEEEEEecCCce
Confidence 5 334554 345666664
No 220
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.43 E-value=6.5e-05 Score=63.43 Aligned_cols=196 Identities=12% Similarity=0.090 Sum_probs=119.6
Q ss_pred eEEEEEcCCCCEEEEee-C--CCeEEEEECCCCceEEEEec-ccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCC
Q 022074 42 IFSLKFSTDGRELVAGS-S--DDCIYVYDLEANKLSLRILA-HTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVK 117 (303)
Q Consensus 42 v~~l~~s~~g~~l~sgs-~--Dg~v~lwd~~~~~~~~~~~~-h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~ 117 (303)
...+.|++++ .|+.++ . ++.|+++|+.+++....+.- .......+++. .+++.++.-.++.+.++|...
T Consensus 23 ~~Gl~~~~dg-~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t---- 95 (266)
T 2iwa_A 23 TQGLVYAEND-TLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRT---- 95 (266)
T ss_dssp EEEEEECSTT-EEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTT----
T ss_pred cccEEEeCCC-eEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCC----
Confidence 5778999986 455543 2 57999999999998766542 22233455553 245566666788999999753
Q ss_pred Cccceeec-ccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCc
Q 022074 118 GKPAGVLM-GHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQS 196 (303)
Q Consensus 118 ~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (303)
.+....+. +...+ ..+ .+++..++.+..++.|.++|....+.......+.
T Consensus 96 ~~v~~~i~~g~~~g-~gl--t~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~-------------------------- 146 (266)
T 2iwa_A 96 LSNIKNFTHQMKDG-WGL--ATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKY-------------------------- 146 (266)
T ss_dssp TEEEEEEECCSSSC-CEE--EECSSSEEEECSSSEEEEECTTTCCEEEEEECEE--------------------------
T ss_pred CcEEEEEECCCCCe-EEE--EECCCEEEEECCCCeEEEEECCCCcEEEEEEECC--------------------------
Confidence 23333332 20122 223 3466656555568899999976432211110000
Q ss_pred ceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEeecC-------------CCCeEEEEECCC
Q 022074 197 VATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYH-------------TSPVRDCSWHPS 263 (303)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~h-------------~~~I~~v~~sp~ 263 (303)
.+... . ..+...+. +++..+....++.|.+.|..+++.+..+... ..-.+.++|+|+
T Consensus 147 ----~~~p~-~----~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~ 216 (266)
T 2iwa_A 147 ----NGHRV-I----RLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQE 216 (266)
T ss_dssp ----TTEEC-C----CEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETT
T ss_pred ----CCccc-c----cceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCC
Confidence 00000 0 00011133 5666666667899999999999988887632 135689999999
Q ss_pred CC-eEEEEeCCCCEEEeecCC
Q 022074 264 QP-MLVSSSWDGDVVRWEFPG 283 (303)
Q Consensus 264 ~~-~las~s~Dg~i~~Wd~~~ 283 (303)
++ +++|+.....+..-++..
T Consensus 217 ~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 217 NKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp TTEEEEEETTCSEEEEEEEEE
T ss_pred CCEEEEECCCCCeEEEEEEec
Confidence 76 677787888888888754
No 221
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.41 E-value=4.4e-06 Score=73.34 Aligned_cols=225 Identities=11% Similarity=0.022 Sum_probs=119.7
Q ss_pred cceEEEEEcCCCCEEEEee--CCCeEEEEECCCCceEEEEe-------cccCCeEEEEEccCCCcEEEEecC-----CCe
Q 022074 40 FGIFSLKFSTDGRELVAGS--SDDCIYVYDLEANKLSLRIL-------AHTSDVNTVCFGDESGHLIYSGSD-----DNL 105 (303)
Q Consensus 40 ~~v~~l~~s~~g~~l~sgs--~Dg~v~lwd~~~~~~~~~~~-------~h~~~v~~l~~~~~~~~~l~s~s~-----dg~ 105 (303)
.....++++++|+.+++.. .++.++||.+.++++ ..+. .|...+..+++.+ +++++++-.. ++.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~-~g~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDG-NGIVWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECS-SSEEEEEECHHHHTSCCE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcC-CCcEEEEcCCCCcCCCCe
Confidence 4588999999999888853 234355665555543 2221 2345788999964 4666554433 578
Q ss_pred EEEEcCccccCCCccceeec------ccccCeEEEEeCCC-CCEEEEEe---CCCcEEEEEcccccCCcccccCccceee
Q 022074 106 CKVWDRRCLNVKGKPAGVLM------GHLEGITFIDSRGD-GRYLISNG---KDQAIKLWDIRKMSSNASCNLGFRSYEW 175 (303)
Q Consensus 106 v~lWd~~~~~~~~~~~~~~~------~h~~~v~~~~~~~~-~~~l~s~~---~D~~v~lWdl~~~~~~~~~~~~~~~~~~ 175 (303)
|.+||+.. ++....+. .+...+..+.+.++ +..+++.. .++.|.+||+.......... .......
T Consensus 95 i~~~d~~t----g~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~-~~~~~~~ 169 (343)
T 2qe8_A 95 LVAWDTLN----NQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQ-GYPGIAP 169 (343)
T ss_dssp EEEEETTT----TEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECT-TCTTTSC
T ss_pred EEEEECCC----CeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEec-CCCcccc
Confidence 99999752 22222221 12234567778765 44456665 68899999986432110000 0000000
Q ss_pred eceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCC-eEEEEECC---CCe-----EEE
Q 022074 176 DYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDS-CVYVYDLV---SGE-----QVA 246 (303)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg-~i~iwd~~---~~~-----~~~ 246 (303)
+ ...+.+... .+....................++++++.|+.+..++ .++.++.. .+. ...
T Consensus 170 ~--~~~~~~~g~--------~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 239 (343)
T 2qe8_A 170 E--DIDLVIDGV--------PVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGS 239 (343)
T ss_dssp C--SCCCEETTE--------ECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHT
T ss_pred c--ccceeECCE--------EEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhc
Confidence 0 000000000 0000000000000000112345788998888877665 56555532 110 000
Q ss_pred --EeecCCCCeEEEEECCCCCeEEEEeCCCCEEEeec
Q 022074 247 --ALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEF 281 (303)
Q Consensus 247 --~~~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~ 281 (303)
...++......++++++|+++++...++.|.+||.
T Consensus 240 ~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 240 KIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITS 276 (343)
T ss_dssp TCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEET
T ss_pred ceEecccCCCCceEEECCCCCEEEEccCCCeEEEEEC
Confidence 11134445678999999999999999999999997
No 222
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.39 E-value=2.2e-05 Score=75.59 Aligned_cols=218 Identities=13% Similarity=0.149 Sum_probs=120.4
Q ss_pred hccccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEeeCCCe-------------EEEEECCCCceE--EEEe--
Q 022074 16 ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDC-------------IYVYDLEANKLS--LRIL-- 78 (303)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~-------------v~lwd~~~~~~~--~~~~-- 78 (303)
.+-+.|++.-+|.... + .-+......++|+ ||+.|+.++.+.. |++|++.+++.. ....
T Consensus 154 ~~~i~v~dl~tg~~~~--~-~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~ 229 (693)
T 3iuj_A 154 WREIHLMDVESKQPLE--T-PLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAI 229 (693)
T ss_dssp EEEEEEEETTTCSEEE--E-EEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCS
T ss_pred eEEEEEEECCCCCCCc--c-ccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecC
Confidence 3556667665554221 1 1111113568899 9999999888754 999999876531 1122
Q ss_pred c-ccCCeEEEEEccCCCcEE-EEecC---CCeEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEE-EEEeCC---
Q 022074 79 A-HTSDVNTVCFGDESGHLI-YSGSD---DNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYL-ISNGKD--- 149 (303)
Q Consensus 79 ~-h~~~v~~l~~~~~~~~~l-~s~s~---dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~D--- 149 (303)
. |......+.|+++ ++.+ ++.+. +..|+++|+.... .....+..+.+..... ++++|..| +....|
T Consensus 230 ~~~~~~~~~~~~SpD-g~~l~~~~~~~~~~~~i~~~d~~~~~---~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~ 304 (693)
T 3iuj_A 230 PAQHHRYVGATVTED-DRFLLISAANSTSGNRLYVKDLSQEN---APLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPN 304 (693)
T ss_dssp GGGCCSEEEEEECTT-SCEEEEEEESSSSCCEEEEEETTSTT---CCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTT
T ss_pred CCCCeEEEEEEEcCC-CCEEEEEEccCCCCcEEEEEECCCCC---CceEEEeCCCCceEEE-EeccCCEEEEEECCCCCC
Confidence 2 3345678889765 5554 44432 3589999975321 1233455555555443 44455554 444443
Q ss_pred CcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEe
Q 022074 150 QAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGS 229 (303)
Q Consensus 150 ~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~ 229 (303)
..|..+|+...... .| ..+..+... .+ .++++++.|+...
T Consensus 305 ~~l~~~d~~~~~~~----------~~----------------------~~l~~~~~~--~~------~~s~~g~~lv~~~ 344 (693)
T 3iuj_A 305 RRLVTVDAANPGPA----------HW----------------------RDLIPERQQ--VL------TVHSGSGYLFAEY 344 (693)
T ss_dssp CEEEEEETTSCCGG----------GC----------------------EEEECCCSS--CE------EEEEETTEEEEEE
T ss_pred CEEEEEeCCCCCcc----------cc----------------------EEEecCCCC--EE------EEEEECCEEEEEE
Confidence 56777776532110 00 001111100 01 1344555555544
Q ss_pred -CCC--eEEEEECCCCeEEEEee-cCCCCeEEEEECCCCCeEEEEeCC----CCEEEeecCC
Q 022074 230 -HDS--CVYVYDLVSGEQVAALK-YHTSPVRDCSWHPSQPMLVSSSWD----GDVVRWEFPG 283 (303)
Q Consensus 230 -~dg--~i~iwd~~~~~~~~~~~-~h~~~I~~v~~sp~~~~las~s~D----g~i~~Wd~~~ 283 (303)
.++ .|++||+..+. ...+. .....+..+.++|+++.|+....+ +++..||+.+
T Consensus 345 ~~~g~~~l~~~d~~g~~-~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~ 405 (693)
T 3iuj_A 345 MVDATARVEQFDYEGKR-VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKS 405 (693)
T ss_dssp EETTEEEEEEECTTSCE-EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTT
T ss_pred EECCeeEEEEEECCCCe-eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCC
Confidence 454 68999987544 44443 234567888899998866555444 7888888754
No 223
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.36 E-value=2.9e-05 Score=69.17 Aligned_cols=189 Identities=14% Similarity=0.160 Sum_probs=114.7
Q ss_pred EEEcCCCCEEEEeeC-----CCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEec----------CCCeEEEE
Q 022074 45 LKFSTDGRELVAGSS-----DDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGS----------DDNLCKVW 109 (303)
Q Consensus 45 l~~s~~g~~l~sgs~-----Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s----------~dg~v~lW 109 (303)
....|+++++++... ++.|.++|..+++...++..-..+ . ++++|+ ++.++.++ .+++|.+|
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spD-G~~lyVan~~~~r~~~G~~~~~Vsvi 114 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADD-GSFIAHASTVFSRIARGERTDYVEVF 114 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTT-SSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCC-CCEEEEEcccccccccCCCCCEEEEE
Confidence 344689999888876 679999999999988777644444 3 889765 55555443 36789999
Q ss_pred cCccccCCCccceeec-cc------ccCeEEEEeCCCCCEEEEEeC--CCcEEEEEcccccCCcccccCccceeeeceee
Q 022074 110 DRRCLNVKGKPAGVLM-GH------LEGITFIDSRGDGRYLISNGK--DQAIKLWDIRKMSSNASCNLGFRSYEWDYRWM 180 (303)
Q Consensus 110 d~~~~~~~~~~~~~~~-~h------~~~v~~~~~~~~~~~l~s~~~--D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~ 180 (303)
|.... +....+. +. ...-..+.+++||++++.++. ++.|.++|+...+.......
T Consensus 115 D~~t~----~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v------------ 178 (386)
T 3sjl_D 115 DPVTL----LPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDV------------ 178 (386)
T ss_dssp CTTTC----CEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC------------
T ss_pred ECCCC----eEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEEC------------
Confidence 97632 2333221 11 112345678999999887764 68999999875432111100
Q ss_pred eCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCC-CeEEEEeecC----CCCe
Q 022074 181 DYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVS-GEQVAALKYH----TSPV 255 (303)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~-~~~~~~~~~h----~~~I 255 (303)
.+ | ...++.+.+.+++.+.||.+.+.++.+ ++.......+ ..++
T Consensus 179 --------------------~g---------~--~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~ 227 (386)
T 3sjl_D 179 --------------------PD---------C--YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFL 227 (386)
T ss_dssp --------------------CS---------E--EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCB
T ss_pred --------------------CC---------c--ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccc
Confidence 00 0 001122344566777788888888865 4532211111 1233
Q ss_pred E-EEEE-CCCCCeEEEEeCCCCEEEeecCCC
Q 022074 256 R-DCSW-HPSQPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 256 ~-~v~~-sp~~~~las~s~Dg~i~~Wd~~~~ 284 (303)
. ..+| .++|+++. .+.+|++.+.|..+.
T Consensus 228 ~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~ 257 (386)
T 3sjl_D 228 INHPAYSQKAGRLVW-PTYTGKIHQIDLSSG 257 (386)
T ss_dssp CSCCEEETTTTEEEE-EBTTSEEEEEECTTS
T ss_pred cccceeEcCCCcEEE-EeCCCEEEEEECCCC
Confidence 2 2466 46787655 445789999998643
No 224
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.27 E-value=0.0001 Score=61.89 Aligned_cols=218 Identities=12% Similarity=0.084 Sum_probs=113.7
Q ss_pred CCceEEEEEccCchhhccc-cccccccCcCcccccCCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEec
Q 022074 1 MSPIVHIVDVGSGTMESLA-NVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILA 79 (303)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~ 79 (303)
|||--.||-=.-|+|---. +-.|+. +..+-+...++ ..+.|+ ++....+.+.+|.|+.+|+++++...++..
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~Vv---~~~phd~~~ft---qGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~ 93 (268)
T 3nok_A 21 MSPTNRPVPDAGGSVQEPVRRVAHII---REYPHATNAFT---QGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWMERL 93 (268)
T ss_dssp --------------CCCCEEEEEEEE---EEEECCTTCCE---EEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEEEC
T ss_pred cCCCCCcCCCCCCcccCccccceEEE---EEEcCCCcccc---ceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEECC
Confidence 6777777766667776110 111221 11122333443 445676 455666677888999999999987766622
Q ss_pred ccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEccc
Q 022074 80 HTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRK 159 (303)
Q Consensus 80 h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~ 159 (303)
....-..+++ ..+++....-.++.+.++|... .+.+..+.-..++ ..++ +++..|+.+..++.|.++|...
T Consensus 94 ~~~FgeGit~--~g~~Ly~ltw~~~~v~V~D~~T----l~~~~ti~~~~eG-wGLt--~Dg~~L~vSdGs~~l~~iDp~T 164 (268)
T 3nok_A 94 GNIFAEGLAS--DGERLYQLTWTEGLLFTWSGMP----PQRERTTRYSGEG-WGLC--YWNGKLVRSDGGTMLTFHEPDG 164 (268)
T ss_dssp TTCCEEEEEE--CSSCEEEEESSSCEEEEEETTT----TEEEEEEECSSCC-CCEE--EETTEEEEECSSSEEEEECTTT
T ss_pred CCcceeEEEE--eCCEEEEEEccCCEEEEEECCc----CcEEEEEeCCCce-eEEe--cCCCEEEEECCCCEEEEEcCCC
Confidence 2222233555 3356666666789999999753 2333333321222 2232 4566666666688999999765
Q ss_pred ccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEEC
Q 022074 160 MSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDL 239 (303)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~ 239 (303)
.+........ ..+.. ...+.. ..+. +|+..+....+..|.+.|.
T Consensus 165 ~~v~~~I~V~------------------------------~~g~~-v~~lNe----Le~~-dG~lyanvw~s~~I~vIDp 208 (268)
T 3nok_A 165 FALVGAVQVK------------------------------LRGQP-VELINE----LECA-NGVIYANIWHSSDVLEIDP 208 (268)
T ss_dssp CCEEEEEECE------------------------------ETTEE-CCCEEE----EEEE-TTEEEEEETTCSEEEEECT
T ss_pred CeEEEEEEeC------------------------------CCCcc-cccccc----cEEe-CCEEEEEECCCCeEEEEeC
Confidence 3321111000 00000 000000 0112 5776666667889999999
Q ss_pred CCCeEEEEeecC-------------CCCeEEEEECCCCC-eEEEE
Q 022074 240 VSGEQVAALKYH-------------TSPVRDCSWHPSQP-MLVSS 270 (303)
Q Consensus 240 ~~~~~~~~~~~h-------------~~~I~~v~~sp~~~-~las~ 270 (303)
.+|+.+..+... .+-.+.+||+|+++ +++||
T Consensus 209 ~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 209 ATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp TTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred CCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 999988877532 13568999999765 56655
No 225
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.27 E-value=0.00014 Score=61.01 Aligned_cols=183 Identities=12% Similarity=0.124 Sum_probs=105.3
Q ss_pred EEEEEcCCCCEEEEeeCCC--eEEEEECCCCceEEEEecccC-CeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCc
Q 022074 43 FSLKFSTDGRELVAGSSDD--CIYVYDLEANKLSLRILAHTS-DVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGK 119 (303)
Q Consensus 43 ~~l~~s~~g~~l~sgs~Dg--~v~lwd~~~~~~~~~~~~h~~-~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~ 119 (303)
..+.|+ ++....+.+.+| .|+.+|+++++...++.-... .-..++.. .+++....-.++.+.++|... .+
T Consensus 46 qGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~--g~~ly~ltw~~~~v~v~D~~t----~~ 118 (262)
T 3nol_A 46 EGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDW--KDKIVGLTWKNGLGFVWNIRN----LR 118 (262)
T ss_dssp EEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTT----CC
T ss_pred ceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEe--CCEEEEEEeeCCEEEEEECcc----Cc
Confidence 456787 666566666666 899999999998766543221 12334442 345555555688999999753 23
Q ss_pred cceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceE
Q 022074 120 PAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVAT 199 (303)
Q Consensus 120 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (303)
....+.-..++ ..++ +++..|+.+..+..|.++|.............
T Consensus 119 ~~~ti~~~~eG-~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~------------------------------ 165 (262)
T 3nol_A 119 QVRSFNYDGEG-WGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITVT------------------------------ 165 (262)
T ss_dssp EEEEEECSSCC-CCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEECE------------------------------
T ss_pred EEEEEECCCCc-eEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEec------------------------------
Confidence 34333321222 2222 34555555445778888887643321111000
Q ss_pred EecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEeecC------------CCCeEEEEECCCCCeE
Q 022074 200 YKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYH------------TSPVRDCSWHPSQPML 267 (303)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~h------------~~~I~~v~~sp~~~~l 267 (303)
..+... ..+- ...+. +|+..+....+..|.+.|..+|+.+..+... ..-.+.+||+|+++.|
T Consensus 166 ~~g~~~-~~lN----ELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~l 239 (262)
T 3nol_A 166 AHGEEL-PELN----ELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRL 239 (262)
T ss_dssp ETTEEC-CCEE----EEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEE
T ss_pred cCCccc-cccc----eeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEE
Confidence 000000 0000 00122 5776766668899999999999988877642 1246899999987755
Q ss_pred EEEe
Q 022074 268 VSSS 271 (303)
Q Consensus 268 as~s 271 (303)
..++
T Consensus 240 fVTG 243 (262)
T 3nol_A 240 FVTG 243 (262)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 5554
No 226
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.22 E-value=9.1e-05 Score=71.30 Aligned_cols=54 Identities=17% Similarity=0.218 Sum_probs=39.3
Q ss_pred eeCCCeEEEEEeCCCeEEEEECCCCeEEEEeecCCC-CeEEEEECCCCCe-EEEEe
Q 022074 218 YSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTS-PVRDCSWHPSQPM-LVSSS 271 (303)
Q Consensus 218 ~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~h~~-~I~~v~~sp~~~~-las~s 271 (303)
+++.+.+++.|+.||.++.||.++|+++-.++.... ...-+.|+.+|++ ++..+
T Consensus 482 ~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv~~~~ 537 (689)
T 1yiq_A 482 LSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYVTFMA 537 (689)
T ss_dssp EEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred ceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEEEEEe
Confidence 344567888899999999999999999988764432 2244677889874 44443
No 227
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.19 E-value=0.00068 Score=60.16 Aligned_cols=186 Identities=12% Similarity=0.041 Sum_probs=109.7
Q ss_pred EEcCCCCEEEEeeC--CC---eEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEec----------CCCeEEEEc
Q 022074 46 KFSTDGRELVAGSS--DD---CIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGS----------DDNLCKVWD 110 (303)
Q Consensus 46 ~~s~~g~~l~sgs~--Dg---~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s----------~dg~v~lWd 110 (303)
...|+++++++... .+ +|.++|..+++...++..-... .++++|+ ++.++.+. .++.|.+||
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spD-g~~lyv~n~~~~~~~rg~~~~~v~viD 103 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHS-GSEFALASTSFSRIAKGKRTDYVEVFD 103 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCC-CCEEEEEeccccccccCCCCCeEEEEE
Confidence 34478888777653 22 8899999999877665543333 8889765 66666654 367899999
Q ss_pred CccccCCCccceeec-c------cccCeEEEEeCCCCCEEEEEeC--CCcEEEEEcccccCCcc-cccCccceeeeceee
Q 022074 111 RRCLNVKGKPAGVLM-G------HLEGITFIDSRGDGRYLISNGK--DQAIKLWDIRKMSSNAS-CNLGFRSYEWDYRWM 180 (303)
Q Consensus 111 ~~~~~~~~~~~~~~~-~------h~~~v~~~~~~~~~~~l~s~~~--D~~v~lWdl~~~~~~~~-~~~~~~~~~~~~~~~ 180 (303)
....+ ....+. + +...-..+.++|+|++|+.++. +++|.++| ...+.... ..
T Consensus 104 ~~t~~----~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~------------- 165 (373)
T 2mad_H 104 PVTFL----PIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLS------------- 165 (373)
T ss_pred CCCCc----EEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcC-------------
Confidence 75322 222111 1 0122346789999999988774 57899999 65332110 00
Q ss_pred eCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEee-----cCCCCe
Q 022074 181 DYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALK-----YHTSPV 255 (303)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~-----~h~~~I 255 (303)
...+ .+. +....+.+++.+.||.+.++|. +++.+.... ....++
T Consensus 166 ------------~~~~---------------~~~---~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~ 214 (373)
T 2mad_H 166 ------------SPTC---------------YHI---HPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNL 214 (373)
T ss_pred ------------CCce---------------EEE---EeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcce
Confidence 0000 000 1112344566778999999999 877653322 112232
Q ss_pred -EEEEECCCCCeEEEEeCCCCEEEeecCC
Q 022074 256 -RDCSWHPSQPMLVSSSWDGDVVRWEFPG 283 (303)
Q Consensus 256 -~~v~~sp~~~~las~s~Dg~i~~Wd~~~ 283 (303)
....+.+++..++-.+.++.+.+.|+..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~v~vid~~~ 243 (373)
T 2mad_H 215 LTQPAQANKSGRIVWPVYSGKILQADISA 243 (373)
T ss_pred eecceeEecCCEEEEEcCCceEEEEeccC
Confidence 2356677765444344677888888753
No 228
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.18 E-value=0.0001 Score=70.78 Aligned_cols=68 Identities=15% Similarity=0.230 Sum_probs=48.3
Q ss_pred eeCCCeEEEEEeCCCeEEEEECCCCeEEEEeecCC-CCeEEEEECCCCCe-EEEEeC----------------CCCEEEe
Q 022074 218 YSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHT-SPVRDCSWHPSQPM-LVSSSW----------------DGDVVRW 279 (303)
Q Consensus 218 ~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~h~-~~I~~v~~sp~~~~-las~s~----------------Dg~i~~W 279 (303)
++..+.+++.++.||.+++||.++|+.+..+.... ....-+.|+++|++ ++..+. .+.+..|
T Consensus 484 ~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~~~~G~~~~~~~~~~~~~~~~~~~l~~f 563 (677)
T 1kb0_A 484 LTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVSVAVGWGGVYGLAARATERQGPGTVYTF 563 (677)
T ss_dssp EEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEECCCHHHHHHCCSCSCCCCCEEEEE
T ss_pred eEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEEEEeccCCccccccccccccCCCCeEEEE
Confidence 34456678889999999999999999998886443 23344567788874 444333 4688888
Q ss_pred ecCCCC
Q 022074 280 EFPGNG 285 (303)
Q Consensus 280 d~~~~~ 285 (303)
.++..+
T Consensus 564 ~l~~~a 569 (677)
T 1kb0_A 564 VVGGKA 569 (677)
T ss_dssp EETCBC
T ss_pred eccccc
Confidence 887543
No 229
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.16 E-value=0.00039 Score=62.79 Aligned_cols=102 Identities=16% Similarity=0.016 Sum_probs=65.7
Q ss_pred EEEccCchhhccccccccccCcCcccccCCCcccceEEEEEcCCCCEEEEee----------CCCeEEEEECCCCceEEE
Q 022074 7 IVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS----------SDDCIYVYDLEANKLSLR 76 (303)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~sgs----------~Dg~v~lwd~~~~~~~~~ 76 (303)
..+-+..+|...+.|.+.-++.-. ...+.|.. + .+.++|||++++++. .++.|.++|..+.+...+
T Consensus 89 V~n~~~~~~~~~VsVID~~t~~vv-~~I~vG~~-P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~ 164 (426)
T 3c75_H 89 IQDPAHFAAITQQFVIDGSTGRIL-GMTDGGFL-P--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIAD 164 (426)
T ss_dssp EEECTTTCSSEEEEEEETTTTEEE-EEEEECSS-C--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEE
T ss_pred EECCCcCCCCCeEEEEECCCCEEE-EEEECCCC-C--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEE
Confidence 333333333356667766555422 22333432 4 799999999998886 367899999999987766
Q ss_pred Eecc-------cCCeEEEEEccCCCcEEEEecC--CCeEEEEcCcc
Q 022074 77 ILAH-------TSDVNTVCFGDESGHLIYSGSD--DNLCKVWDRRC 113 (303)
Q Consensus 77 ~~~h-------~~~v~~l~~~~~~~~~l~s~s~--dg~v~lWd~~~ 113 (303)
+.-. ......+++++ ++++++.+.. +++|.+.|+..
T Consensus 165 I~v~g~~r~~~g~~P~~~~~sp-DGk~lyV~n~~~~~~VsVID~~t 209 (426)
T 3c75_H 165 IELPDAPRFLVGTYQWMNALTP-DNKNLLFYQFSPAPAVGVVDLEG 209 (426)
T ss_dssp EEETTCCCCCBSCCGGGSEECT-TSSEEEEEECSSSCEEEEEETTT
T ss_pred EECCCccccccCCCcceEEEcC-CCCEEEEEecCCCCeEEEEECCC
Confidence 5421 12345678865 4667766653 57899999763
No 230
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.14 E-value=0.00021 Score=64.31 Aligned_cols=113 Identities=12% Similarity=0.083 Sum_probs=78.6
Q ss_pred cceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEE----EecccCCe--EEEEEccCCCcEEEEecCCCeEEEEcCcc
Q 022074 40 FGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLR----ILAHTSDV--NTVCFGDESGHLIYSGSDDNLCKVWDRRC 113 (303)
Q Consensus 40 ~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~----~~~h~~~v--~~l~~~~~~~~~l~s~s~dg~v~lWd~~~ 113 (303)
....+++++|++..|+++..++.|+.||..++..... ..++...- +.++|++..+.++++-..++.|+.|+...
T Consensus 219 ~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g 298 (409)
T 3hrp_A 219 GKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDG 298 (409)
T ss_dssp SCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTC
T ss_pred CCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCC
Confidence 4567899999655666677788999999988764322 11222222 28999775677888888889999998641
Q ss_pred ccCCCccceeecccc---------------cCeEEEEeCCCCCEEEEEe-CCCcEEEEEcc
Q 022074 114 LNVKGKPAGVLMGHL---------------EGITFIDSRGDGRYLISNG-KDQAIKLWDIR 158 (303)
Q Consensus 114 ~~~~~~~~~~~~~h~---------------~~v~~~~~~~~~~~l~s~~-~D~~v~lWdl~ 158 (303)
. ...+.++. .....+++.++|+++++.. .++.|+.||+.
T Consensus 299 -----~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~ 353 (409)
T 3hrp_A 299 -----E-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDIL 353 (409)
T ss_dssp -----C-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETT
T ss_pred -----C-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECC
Confidence 1 11222221 2366888999999888888 89999999964
No 231
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.08 E-value=0.0019 Score=53.46 Aligned_cols=183 Identities=14% Similarity=0.104 Sum_probs=104.1
Q ss_pred eEEEEEcCCCCEEEEeeCC--CeEEEEECCCCceEEEEecccC-CeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCC
Q 022074 42 IFSLKFSTDGRELVAGSSD--DCIYVYDLEANKLSLRILAHTS-DVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKG 118 (303)
Q Consensus 42 v~~l~~s~~g~~l~sgs~D--g~v~lwd~~~~~~~~~~~~h~~-~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~ 118 (303)
...+.|+. +....+.+.+ ..|+.+|+++++...++.-... .-..++.. .+++....-.++.+.++|... .
T Consensus 23 tqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~v~v~D~~t----l 95 (243)
T 3mbr_X 23 TEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHEGFVYDLAT----L 95 (243)
T ss_dssp EEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTT----T
T ss_pred cccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCCEEEEEECCc----C
Confidence 34567875 4445555554 4899999999998766543221 22334442 345665666788999999753 2
Q ss_pred ccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcce
Q 022074 119 KPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVA 198 (303)
Q Consensus 119 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (303)
+.+..+.-..++ ..++ +++..|+.+..++.|.++|....+......... . ...+
T Consensus 96 ~~~~ti~~~~~G-wglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~--------------~--------g~~~- 149 (243)
T 3mbr_X 96 TPRARFRYPGEG-WALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTA--------------G--------GRPL- 149 (243)
T ss_dssp EEEEEEECSSCC-CEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEE--------------T--------TEEC-
T ss_pred cEEEEEeCCCCc-eEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEcc--------------C--------Cccc-
Confidence 334443322222 2333 345445444458889999976533211110000 0 0000
Q ss_pred EEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEeecC-------------CCCeEEEEECCCCC
Q 022074 199 TYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYH-------------TSPVRDCSWHPSQP 265 (303)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~h-------------~~~I~~v~~sp~~~ 265 (303)
..+. .+. + .+++..+....+..|.+.|..+|+.+..+... .+-.+.+||+|+++
T Consensus 150 -----~~lN-eLe------~-~~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~ 216 (243)
T 3mbr_X 150 -----DNLN-ELE------W-VNGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHD 216 (243)
T ss_dssp -----CCEE-EEE------E-ETTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTT
T ss_pred -----ccce-eeE------E-eCCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCC
Confidence 0000 011 1 15676666667889999999999988877522 12468999999866
Q ss_pred -eEEEE
Q 022074 266 -MLVSS 270 (303)
Q Consensus 266 -~las~ 270 (303)
+++||
T Consensus 217 ~lfVTG 222 (243)
T 3mbr_X 217 RLFVTG 222 (243)
T ss_dssp EEEEEE
T ss_pred EEEEEC
Confidence 55555
No 232
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.05 E-value=0.0007 Score=61.16 Aligned_cols=192 Identities=18% Similarity=0.191 Sum_probs=110.5
Q ss_pred CCCCEEEE-eeCCCeEEEEECCCC----ceEEEEe------ccc-CCeEEEEEccCCCcEEEEecCC------CeEEEEc
Q 022074 49 TDGRELVA-GSSDDCIYVYDLEAN----KLSLRIL------AHT-SDVNTVCFGDESGHLIYSGSDD------NLCKVWD 110 (303)
Q Consensus 49 ~~g~~l~s-gs~Dg~v~lwd~~~~----~~~~~~~------~h~-~~v~~l~~~~~~~~~l~s~s~d------g~v~lWd 110 (303)
.++++|++ |..+++|+++|+.+. ++...+. ... ..-..+...| ++ +++++..+ +.|.+.|
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~p-dG-i~Vs~~g~~~g~~~g~v~vlD 170 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGP-DA-IYISALGNEEGEGPGGILMLD 170 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECS-SC-EEEEEEEETTSCSCCEEEEEC
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECC-Ce-EEEEcCCCcCCCCCCeEEEEE
Confidence 77887666 556888999999765 3444331 111 1222344444 45 77777655 7899999
Q ss_pred CccccCCCccceeec-c-cccCeE-EEEeCCCCCEEEEEe-------------------CCCcEEEEEcccccCCccccc
Q 022074 111 RRCLNVKGKPAGVLM-G-HLEGIT-FIDSRGDGRYLISNG-------------------KDQAIKLWDIRKMSSNASCNL 168 (303)
Q Consensus 111 ~~~~~~~~~~~~~~~-~-h~~~v~-~~~~~~~~~~l~s~~-------------------~D~~v~lWdl~~~~~~~~~~~ 168 (303)
.... +.++... + ....+. .+-++|+++.+++.. .+.+|.+||+...+....
T Consensus 171 ~~T~----~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~t--- 243 (462)
T 2ece_A 171 HYSF----EPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHS--- 243 (462)
T ss_dssp TTTC----CEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEE---
T ss_pred CCCC----eEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeE---
Confidence 7532 3333332 1 222221 245688999888884 479999999864321111
Q ss_pred CccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEe------CCCeEEEEECCCC
Q 022074 169 GFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGS------HDSCVYVYDLVSG 242 (303)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~------~dg~i~iwd~~~~ 242 (303)
++-... .....+....|+|+++++..++ .+++|.+|..+.+
T Consensus 244 -------------------------------I~vg~~--g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g 290 (462)
T 2ece_A 244 -------------------------------LTLGEE--NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDG 290 (462)
T ss_dssp -------------------------------EESCTT--EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETT
T ss_pred -------------------------------EecCCC--CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCC
Confidence 000000 0000111123578888877776 4668888776655
Q ss_pred eE--EEEe--ecC----------------CCCeEEEEECCCCCeEEEE-eCCCCEEEeecC
Q 022074 243 EQ--VAAL--KYH----------------TSPVRDCSWHPSQPMLVSS-SWDGDVVRWEFP 282 (303)
Q Consensus 243 ~~--~~~~--~~h----------------~~~I~~v~~sp~~~~las~-s~Dg~i~~Wd~~ 282 (303)
+. +..+ ... .....++.+|||+++|..+ -..+.|.++|+.
T Consensus 291 ~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 291 KWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp EEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECS
T ss_pred ceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 32 1111 110 1347899999999975544 447899999985
No 233
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.04 E-value=0.0015 Score=55.96 Aligned_cols=214 Identities=14% Similarity=0.098 Sum_probs=111.4
Q ss_pred CCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCccceeecccccC
Q 022074 51 GRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEG 130 (303)
Q Consensus 51 g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~ 130 (303)
+..+.+++.++.+..+|.. ++.......+...+..+... +++. +..++.++.+..+|.. . .....+......
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~-~~g~-l~vgt~~~~l~~~d~~-g----~~~~~~~~~~~~ 178 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVS-EDGT-IYVGSNDNYLYAINPD-G----TEKWRFKTNDAI 178 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEEC-TTSC-EEEECTTSEEEEECTT-S----CEEEEEECSSCC
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEc-CCCE-EEEEcCCCEEEEECCC-C----CEeEEEecCCCc
Confidence 5568888889999999998 66554444444455555553 3454 5567778899999864 2 222222222334
Q ss_pred eEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeE
Q 022074 131 ITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLI 210 (303)
Q Consensus 131 v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (303)
+..+...+++.+++ ++ +.+..+| .............. .+..+....+...........+..++.........
T Consensus 179 ~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~~~~~~----~~~~~~~~~~g~l~v~t~~~gl~~~~~~g~~~~~~ 250 (330)
T 3hxj_A 179 TSAASIGKDGTIYF-GS--DKVYAIN-PDGTEKWNFYAGYW----TVTRPAISEDGTIYVTSLDGHLYAINPDGTEKWRF 250 (330)
T ss_dssp CSCCEECTTCCEEE-ES--SSEEEEC-TTSCEEEEECCSSC----CCSCCEECTTSCEEEEETTTEEEEECTTSCEEEEE
T ss_pred eeeeEEcCCCEEEE-Ee--CEEEEEC-CCCcEEEEEccCCc----ceeceEECCCCeEEEEcCCCeEEEECCCCCEeEEe
Confidence 44555556676444 44 7888888 32211111100000 00000000111111111111222222111000000
Q ss_pred E----EeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEECCCCCeEEEEeCCCCEEEeecCC
Q 022074 211 R----CHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPG 283 (303)
Q Consensus 211 ~----~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~ 283 (303)
. ....+....++ .|..++.+|.|..+|. +++.+..+......+.++...+++++.+ ++.+|.+++-..+.
T Consensus 251 ~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~l~~-gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 251 KTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGTIYF-GTRNGKFYALFNLE 324 (330)
T ss_dssp ECSSCCCSCCEECTTS-CEEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCCEEE-ECTTSCEEEEEC--
T ss_pred eCCCCccccceEcCCC-eEEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCEEEE-EcCCCeEEEEeccc
Confidence 0 00122233345 4677888889999996 6777666665566778888888887555 67799999877543
No 234
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.99 E-value=0.0032 Score=56.89 Aligned_cols=203 Identities=12% Similarity=0.067 Sum_probs=112.3
Q ss_pred eEEEEEcCCCCEEEEeeCC------CeEEEEECCCCceEEEEecccC---CeEEEEEccCCCcEEEEec-----------
Q 022074 42 IFSLKFSTDGRELVAGSSD------DCIYVYDLEANKLSLRILAHTS---DVNTVCFGDESGHLIYSGS----------- 101 (303)
Q Consensus 42 v~~l~~s~~g~~l~sgs~D------g~v~lwd~~~~~~~~~~~~h~~---~v~~l~~~~~~~~~l~s~s----------- 101 (303)
-..+..+|+| .++++..+ |.|.++|.++.+...++..-.. .-..+-|+|+ .+.+++..
T Consensus 140 Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~-~~~mvsS~wg~p~~~~~g~ 217 (462)
T 2ece_A 140 LHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLP-NEVLVSSEWAVPNTIEDGL 217 (462)
T ss_dssp EEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETT-TTEEEECBCCCHHHHTTCC
T ss_pred ccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCC-CCEEEEccCcCcccccccc
Confidence 3556788999 66666555 7899999999988777652211 1224666654 66887875
Q ss_pred --------CCCeEEEEcCccccCCCccceeeccc-c-cCeEEE--EeCCCCCEEEEEe------CCCcEEEEEcccccCC
Q 022074 102 --------DDNLCKVWDRRCLNVKGKPAGVLMGH-L-EGITFI--DSRGDGRYLISNG------KDQAIKLWDIRKMSSN 163 (303)
Q Consensus 102 --------~dg~v~lWd~~~~~~~~~~~~~~~~h-~-~~v~~~--~~~~~~~~l~s~~------~D~~v~lWdl~~~~~~ 163 (303)
.+.+|.+||+.. .+....+.-- . .....+ .++|+++++..+. .+++|.+|......
T Consensus 218 ~~~~~~~~~~d~V~v~D~~~----~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~-- 291 (462)
T 2ece_A 218 KLEHLKDRYGNRIHFWDLRK----RKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGK-- 291 (462)
T ss_dssp CTTTHHHHSCCEEEEEETTT----TEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTE--
T ss_pred chhhhhhccCCEEEEEECCC----CcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCc--
Confidence 368999999863 2223233211 1 122333 3599998876655 56678777653210
Q ss_pred cccccCccceeeece-eeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEe-CCCeEEEEECC-
Q 022074 164 ASCNLGFRSYEWDYR-WMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGS-HDSCVYVYDLV- 240 (303)
Q Consensus 164 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~-~dg~i~iwd~~- 240 (303)
|... ..+.+.....-..+.. -..+.+.. .......+|+|+++|.++. ..+.|.++|+.
T Consensus 292 -----------~~~~~vIdi~~~~v~~~lp~~--~~~f~~~~------~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d 352 (462)
T 2ece_A 292 -----------WNAEKVIEIPAEPLEGNLPEI--LKPFKAVP------PLVTDIDISLDDKFLYLSLWGIGEVRQYDISN 352 (462)
T ss_dssp -----------EEEEEEEEECCEECCSSCCGG--GGGGTEEC------CCCCCEEECTTSCEEEEEETTTTEEEEEECSS
T ss_pred -----------eeEEEEEeCCCcccccccccc--ccccccCC------CceeEEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 0000 0001100000000000 00000000 0001123678999888876 57899999985
Q ss_pred --CCeEEEEeecCC--------------CCeEEEEECCCCCeEEEEe
Q 022074 241 --SGEQVAALKYHT--------------SPVRDCSWHPSQPMLVSSS 271 (303)
Q Consensus 241 --~~~~~~~~~~h~--------------~~I~~v~~sp~~~~las~s 271 (303)
+.+.+..+.... +....+++||||++|..+.
T Consensus 353 ~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 353 PFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp TTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 235555554220 1358899999999888887
No 235
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.97 E-value=0.00025 Score=66.18 Aligned_cols=198 Identities=15% Similarity=0.104 Sum_probs=114.8
Q ss_pred ceEEEEE-c-CCCCEEEEee------------------CCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEe
Q 022074 41 GIFSLKF-S-TDGRELVAGS------------------SDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSG 100 (303)
Q Consensus 41 ~v~~l~~-s-~~g~~l~sgs------------------~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~ 100 (303)
....+++ + |+++++++++ .++.+.+.|.++.+...++.--. .-..+..++ +++++++.
T Consensus 135 ~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~sp-dGk~~~vt 212 (595)
T 1fwx_A 135 GIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADY-EGKWAFST 212 (595)
T ss_dssp SEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECS-SSSEEEEE
T ss_pred CCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCC-CccceEECC-CCCEEEEE
Confidence 4778887 4 8999999884 35679999999987766654322 345566755 46676666
Q ss_pred cCCC---------------eEEEE-----------------------cCccccCCCcc-ceeecccccCeEEEEeCCCCC
Q 022074 101 SDDN---------------LCKVW-----------------------DRRCLNVKGKP-AGVLMGHLEGITFIDSRGDGR 141 (303)
Q Consensus 101 s~dg---------------~v~lW-----------------------d~~~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~ 141 (303)
+.+. .|.+. |.+.. .+.. ...+. -.....++.++|||+
T Consensus 213 ~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~--~~~~~~~~Ip-vg~~PhGv~~sPDGk 289 (595)
T 1fwx_A 213 SYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKE--ASSLFTRYIP-IANNPHGCNMAPDKK 289 (595)
T ss_dssp ESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGG--GCCSSEEEEE-EESSCCCEEECTTSS
T ss_pred ecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCccc--CCceeEEEEe-cCCCceEEEEcCCCC
Confidence 6443 23333 32210 0111 11111 112345678999999
Q ss_pred EEEEEe-CCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeC
Q 022074 142 YLISNG-KDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYST 220 (303)
Q Consensus 142 ~l~s~~-~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 220 (303)
+++.++ .+.+|.++|+.+.+....-.+... ........ .-...+...|++
T Consensus 290 ~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~----------------------~~v~~~v~-------vG~gP~h~aF~~ 340 (595)
T 1fwx_A 290 HLCVAGKLSPTVTVLDVTRFDAVFYENADPR----------------------SAVVAEPE-------LGLGPLHTAFDG 340 (595)
T ss_dssp EEEEECTTSSBEEEEEGGGHHHHHHSCCCGG----------------------GGEEECCB-------CCSCEEEEEECT
T ss_pred EEEEeCCCCCeEEEEECcccccccccccCcc----------------------cceEEEcC-------CCCCcceEEECC
Confidence 876555 789999999885321100000000 00000000 000112235888
Q ss_pred CCeEEEEEeCCCeEEEEECCC----------CeEEEEeecCCCCe-----EEEEECCCCCeEEEEeC
Q 022074 221 GQKYIYTGSHDSCVYVYDLVS----------GEQVAALKYHTSPV-----RDCSWHPSQPMLVSSSW 272 (303)
Q Consensus 221 ~~~~latg~~dg~i~iwd~~~----------~~~~~~~~~h~~~I-----~~v~~sp~~~~las~s~ 272 (303)
+|...++..-|+.|.+||+.+ .+.+..+..|-.|- ..+.++|||++|+++..
T Consensus 341 dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 341 RGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp TSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred CCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCC
Confidence 895555677899999999876 45677776665442 23356899999888764
No 236
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.92 E-value=0.0012 Score=61.63 Aligned_cols=212 Identities=14% Similarity=0.165 Sum_probs=122.1
Q ss_pred EEEEE---cCCCCEEEEeeC-CCeEEEEECCCCceEEEEec-ccCCeEEEEEcc-CCCcEEEEec---------------
Q 022074 43 FSLKF---STDGRELVAGSS-DDCIYVYDLEANKLSLRILA-HTSDVNTVCFGD-ESGHLIYSGS--------------- 101 (303)
Q Consensus 43 ~~l~~---s~~g~~l~sgs~-Dg~v~lwd~~~~~~~~~~~~-h~~~v~~l~~~~-~~~~~l~s~s--------------- 101 (303)
..+++ .+||+++.+... ++.|.+.|+++.+....+.- -......+++.. +++.+++.++
T Consensus 90 ~~~s~t~g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~ 169 (595)
T 1fwx_A 90 VHMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMED 169 (595)
T ss_dssp EEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTC
T ss_pred cccCCCCCCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCccccc
Confidence 45555 258888887665 45699999999886553322 224567777743 4566777664
Q ss_pred ---CCCeEEEEcCccccCCCcccee-ecccccCeEEEEeCCCCCEEEEEeCCC---------------cEEEEEcccccC
Q 022074 102 ---DDNLCKVWDRRCLNVKGKPAGV-LMGHLEGITFIDSRGDGRYLISNGKDQ---------------AIKLWDIRKMSS 162 (303)
Q Consensus 102 ---~dg~v~lWd~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~s~~~D~---------------~v~lWdl~~~~~ 162 (303)
.++.+.+.|.... +.... ..+- .-..++++++|+++++.+.+. .|.+.|......
T Consensus 170 ~~~~~~~vtvID~~t~----~v~~qI~Vgg--~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~ 243 (595)
T 1fwx_A 170 VANYVNVFTAVDADKW----EVAWQVLVSG--NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEK 243 (595)
T ss_dssp GGGEEEEEEEEETTTT----EEEEEEEESS--CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHH
T ss_pred ccccCceEEEEECCCC----eEEEEEEeCC--CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeE
Confidence 2456777776421 11111 1111 223456789999988888653 355555432110
Q ss_pred CcccccCccceeeeceeeeCCCCCccccCCCCCcceEEeccc--c-e-eeeEEE---eeeeeeeCCCeEEEEEe-CCCeE
Q 022074 163 NASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHS--V-L-RTLIRC---HFSPVYSTGQKYIYTGS-HDSCV 234 (303)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~-~~~~~~---~~~~~~s~~~~~latg~-~dg~i 234 (303)
. . +.++.... ..+..++... . . ...+.. .....++|||++++.++ .+.+|
T Consensus 244 ~--v-----------------~~Gk~~~i---~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~V 301 (595)
T 1fwx_A 244 A--I-----------------AAGDYQEL---NGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTV 301 (595)
T ss_dssp H--H-----------------HHTCSEEE---TTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBE
T ss_pred e--c-----------------cCCCeeEE---CcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeE
Confidence 0 0 00000000 1122222222 0 0 011111 11235789999776655 78999
Q ss_pred EEEECCCCe------------EEEEeecCCCCeEEEEECCCCCeEEEEeCCCCEEEeecCC
Q 022074 235 YVYDLVSGE------------QVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPG 283 (303)
Q Consensus 235 ~iwd~~~~~------------~~~~~~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~ 283 (303)
.++|..+.+ .+..++. ......++|+|+|...++.-.|+++.+|+++.
T Consensus 302 sVid~~~~~~~~~~~l~~~~~v~~~v~v-G~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 302 TVLDVTRFDAVFYENADPRSAVVAEPEL-GLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp EEEEGGGHHHHHHSCCCGGGGEEECCBC-CSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred EEEECcccccccccccCcccceEEEcCC-CCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 999998653 3344432 24578999999996677888899999999864
No 237
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.90 E-value=0.001 Score=64.03 Aligned_cols=53 Identities=13% Similarity=0.202 Sum_probs=43.2
Q ss_pred CCeEEEEECCCCeEEEEeecCCCCeEEEEECCCCCeEEEEeCCCCEEEeecCCC
Q 022074 231 DSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 231 dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~~ 284 (303)
+|.|+.||+.+|+.+-.++.+ .++....++..+.+++.++.||.++.||....
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG 506 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYV-TIFNGGTLSTAGNLVFEGSADGRVIAYAADTG 506 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTC
T ss_pred ceeEEEEECCCCCeEeEccCC-CCccCccceECCCEEEEECCCCcEEEEECCCC
Confidence 488999999999987776654 34555677788899999999999999997654
No 238
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.88 E-value=0.00081 Score=64.55 Aligned_cols=52 Identities=15% Similarity=0.274 Sum_probs=43.2
Q ss_pred CeEEEEECCCCeEEEEeecCCCCeEEEEECCCCCeEEEEeCCCCEEEeecCCC
Q 022074 232 SCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 232 g~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~~ 284 (303)
|.|..||+.+++.+-.++ +..+++...++..+.+++.++.||.++.||....
T Consensus 457 g~l~A~D~~tG~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG 508 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATG 508 (677)
T ss_dssp EEEEEEETTTTEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTC
T ss_pred cEEEEEeCCCCcEEeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCC
Confidence 789999999999876665 4456677778888888999999999999998644
No 239
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.86 E-value=0.0026 Score=54.81 Aligned_cols=192 Identities=10% Similarity=0.038 Sum_probs=103.5
Q ss_pred eEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEec--------------------ccCCeEEEEEccCCCcEEEEec
Q 022074 42 IFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILA--------------------HTSDVNTVCFGDESGHLIYSGS 101 (303)
Q Consensus 42 v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~--------------------h~~~v~~l~~~~~~~~~l~s~s 101 (303)
-.++++.++|+.+.++..++.|..||..++.... +.. .......+++.++++++++ +.
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v-~d 98 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVD-FAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYI-VD 98 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTTCEEE-EEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEE-EE
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEE-EecccccccccccccccchhccccCCCCceEEEcCCCCcEEE-EE
Confidence 3467788999878888889999999887765432 211 1134678888543455554 43
Q ss_pred CCCeEEEEcCccccCCCccceeec----cc-ccCeEEEEeCC-CCCEEEEEeCC-----------------CcEEEEEcc
Q 022074 102 DDNLCKVWDRRCLNVKGKPAGVLM----GH-LEGITFIDSRG-DGRYLISNGKD-----------------QAIKLWDIR 158 (303)
Q Consensus 102 ~dg~v~lWd~~~~~~~~~~~~~~~----~h-~~~v~~~~~~~-~~~~l~s~~~D-----------------~~v~lWdl~ 158 (303)
..+.+..+|.... ....+. +. ......+.+.+ +|++.++.... +.|..||..
T Consensus 99 ~~~~i~~~d~~~g-----~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~ 173 (322)
T 2fp8_A 99 CYYHLSVVGSEGG-----HATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPS 173 (322)
T ss_dssp TTTEEEEECTTCE-----ECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETT
T ss_pred CCCCEEEEeCCCC-----EEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCC
Confidence 3445777775311 111121 11 12345667777 77666554321 223333221
Q ss_pred cccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEE-EEeCCCeEEEE
Q 022074 159 KMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIY-TGSHDSCVYVY 237 (303)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la-tg~~dg~i~iw 237 (303)
.. .+..+. ..........++++++.|. +-...+.|+++
T Consensus 174 ~~-----------------------------------~~~~~~------~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~ 212 (322)
T 2fp8_A 174 TK-----------------------------------ETTLLL------KELHVPGGAEVSADSSFVLVAEFLSHQIVKY 212 (322)
T ss_dssp TT-----------------------------------EEEEEE------EEESCCCEEEECTTSSEEEEEEGGGTEEEEE
T ss_pred CC-----------------------------------EEEEec------cCCccCcceEECCCCCEEEEEeCCCCeEEEE
Confidence 00 000000 0000111234678887554 44667899999
Q ss_pred ECCCCe--EEEEeecCCCCeEEEEECCCCCeEEEEeC----------CCCEEEeecC
Q 022074 238 DLVSGE--QVAALKYHTSPVRDCSWHPSQPMLVSSSW----------DGDVVRWEFP 282 (303)
Q Consensus 238 d~~~~~--~~~~~~~h~~~I~~v~~sp~~~~las~s~----------Dg~i~~Wd~~ 282 (303)
++.... ....+....+ ...+++.++|++.++... .+.+..++..
T Consensus 213 ~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~ 268 (322)
T 2fp8_A 213 WLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF 268 (322)
T ss_dssp ESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT
T ss_pred ECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCC
Confidence 987421 1112211223 788999999997776654 3556666654
No 240
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.81 E-value=0.01 Score=49.39 Aligned_cols=196 Identities=9% Similarity=-0.001 Sum_probs=111.2
Q ss_pred ceEEEEEcCCCCEEEEee-CCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCc
Q 022074 41 GIFSLKFSTDGRELVAGS-SDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGK 119 (303)
Q Consensus 41 ~v~~l~~s~~g~~l~sgs-~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~ 119 (303)
...+++|+++++.|+.+. .++.|..+++.++.....+.........+++.+..+.++++-..++.|.+++....
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~----- 111 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGT----- 111 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-----
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCC-----
Confidence 467899999776666554 57789999998765433232222467888886655667767777889999886421
Q ss_pred cceeec-ccccCeEEEEeCCCCCEE-EEEeC--CCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCC
Q 022074 120 PAGVLM-GHLEGITFIDSRGDGRYL-ISNGK--DQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQ 195 (303)
Q Consensus 120 ~~~~~~-~h~~~v~~~~~~~~~~~l-~s~~~--D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (303)
....+. ........+++.+++..| ++... .+.|..+++.....
T Consensus 112 ~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~--------------------------------- 158 (267)
T 1npe_A 112 QRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR--------------------------------- 158 (267)
T ss_dssp SCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC---------------------------------
T ss_pred CEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc---------------------------------
Confidence 111121 112345678888865554 44432 35666666532100
Q ss_pred cceEEecccceeeeEEEeeeeeeeCCC-eEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEECCCCCeEEEEeCCC
Q 022074 196 SVATYKGHSVLRTLIRCHFSPVYSTGQ-KYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDG 274 (303)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~s~~~-~~latg~~dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~~las~s~Dg 274 (303)
..+.... ........+++++ .+.++-...+.|.++|.........+.. ......++.. .+.++++....+
T Consensus 159 --~~~~~~~-----~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d-~~~lyva~~~~~ 229 (267)
T 1npe_A 159 --RILAQDN-----LGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTSY-GKNLYYTDWKTN 229 (267)
T ss_dssp --EEEECTT-----CSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEEE-TTEEEEEETTTT
T ss_pred --EEEEECC-----CCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC-CCCceEEEEe-CCEEEEEECCCC
Confidence 0000000 0000112355654 4455556778999999975443333332 2334667664 344555555668
Q ss_pred CEEEeecCC
Q 022074 275 DVVRWEFPG 283 (303)
Q Consensus 275 ~i~~Wd~~~ 283 (303)
.|.++|...
T Consensus 230 ~v~~~d~~~ 238 (267)
T 1npe_A 230 SVIAMDLAI 238 (267)
T ss_dssp EEEEEETTT
T ss_pred eEEEEeCCC
Confidence 898888753
No 241
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.79 E-value=0.0027 Score=55.82 Aligned_cols=222 Identities=7% Similarity=0.015 Sum_probs=109.2
Q ss_pred CCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCccceeeccccc
Q 022074 50 DGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLE 129 (303)
Q Consensus 50 ~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~ 129 (303)
++..+++++.++.|..+|.++|+..-+.............. +..++.++.++.|..+|.+..+ ..-.......
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~---~~~v~v~~~~g~l~~~d~~tG~----~~W~~~~~~~ 174 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVS---DGLVLIHTSNGQLQALNEADGA----VKWTVNLDMP 174 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEE---TTEEEEECTTSEEEEEETTTCC----EEEEEECCC-
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEE---CCEEEEEcCCCeEEEEECCCCc----EEEEEeCCCC
Confidence 46678889999999999999998765444332222222221 3467778889999999975322 1111111100
Q ss_pred Ce-----EEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeecee---eeCCC---CCccccCCCCCcce
Q 022074 130 GI-----TFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRW---MDYPP---QARDLKHPCDQSVA 198 (303)
Q Consensus 130 ~v-----~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~---~~~~~---~~~~~~~~~~~~~~ 198 (303)
.. ..... .+..++.+..++.+..+|.+..+..............+... ....+ ............+.
T Consensus 175 ~~~~~~~~~~~~--~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~ 252 (376)
T 3q7m_A 175 SLSLRGESAPTT--AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLT 252 (376)
T ss_dssp ----CCCCCCEE--ETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEE
T ss_pred ceeecCCCCcEE--ECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEE
Confidence 00 01111 13467778888999999976543222211110000000000 00000 00000001111222
Q ss_pred EEecccc---eeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEeecC-CCCeEEEEECCCCCeEEEEeCCC
Q 022074 199 TYKGHSV---LRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYH-TSPVRDCSWHPSQPMLVSSSWDG 274 (303)
Q Consensus 199 ~~~~~~~---~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~h-~~~I~~v~~sp~~~~las~s~Dg 274 (303)
.++.... ..........+.. ++..+..++.++.+..+|..+++.+-..... ...+..... .+..|..++.+|
T Consensus 253 ~~d~~tG~~~w~~~~~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g 328 (376)
T 3q7m_A 253 ALDLRSGQIMWKRELGSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEG 328 (376)
T ss_dssp EEETTTCCEEEEECCCCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTS
T ss_pred EEECCCCcEEeeccCCCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCC
Confidence 2221110 0000000111222 2446777888999999999999877555421 122222222 256777888899
Q ss_pred CEEEeecCCC
Q 022074 275 DVVRWEFPGN 284 (303)
Q Consensus 275 ~i~~Wd~~~~ 284 (303)
.+..+|....
T Consensus 329 ~l~~~d~~tG 338 (376)
T 3q7m_A 329 YLHWINVEDG 338 (376)
T ss_dssp EEEEEETTTC
T ss_pred eEEEEECCCC
Confidence 9999997543
No 242
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.76 E-value=0.014 Score=51.15 Aligned_cols=218 Identities=12% Similarity=0.057 Sum_probs=109.1
Q ss_pred CCCEEEEeeCCCeEEEEECCCCceEEEEecc---------cCCeEE-EEEccCCCcEEEEecCCCeEEEEcCccccCCCc
Q 022074 50 DGRELVAGSSDDCIYVYDLEANKLSLRILAH---------TSDVNT-VCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGK 119 (303)
Q Consensus 50 ~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h---------~~~v~~-l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~ 119 (303)
.+..+++++.++.|..+|.++++..-+.... ...+.. ... . +..++.++.++.|..+|.+..+
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~v~v~~~~g~l~a~d~~tG~---- 124 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV--S-GGHVYIGSEKAQVYALNTSDGT---- 124 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE--E-TTEEEEEETTSEEEEEETTTCC----
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceE--e-CCEEEEEcCCCEEEEEECCCCC----
Confidence 4677888889999999999999865443321 122222 222 2 3466778889999999975322
Q ss_pred cceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCC--CCCccccCCCCCcc
Q 022074 120 PAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYP--PQARDLKHPCDQSV 197 (303)
Q Consensus 120 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 197 (303)
..-.............. .+..++.++.++.+..+|.+..+.............. .....+ .....+.......+
T Consensus 125 ~~W~~~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~--~~~~~~~~~~~~v~~g~~~g~l 200 (376)
T 3q7m_A 125 VAWQTKVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSL--RGESAPTTAFGAAVVGGDNGRV 200 (376)
T ss_dssp EEEEEECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-------CCCCCCEEETTEEEECCTTTEE
T ss_pred EEEEEeCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceee--cCCCCcEEECCEEEEEcCCCEE
Confidence 11111111110000011 1346778888999999998654332221111000000 000000 00000011111112
Q ss_pred eEEecccc-eeeeEE---------------EeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEEC
Q 022074 198 ATYKGHSV-LRTLIR---------------CHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWH 261 (303)
Q Consensus 198 ~~~~~~~~-~~~~~~---------------~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~s 261 (303)
..++.... ...... ....|... +..+..++.++.+..+|..+|+.+-.... .....+..
T Consensus 201 ~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~v~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~- 275 (376)
T 3q7m_A 201 SAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVV--NGVVFALAYNGNLTALDLRSGQIMWKREL--GSVNDFIV- 275 (376)
T ss_dssp EEEETTTCCEEEEEECCC-----------CCCCCCEEE--TTEEEEECTTSCEEEEETTTCCEEEEECC--CCEEEEEE-
T ss_pred EEEECCCCcEEEEEecccCCCCcccccccccCCCcEEE--CCEEEEEecCcEEEEEECCCCcEEeeccC--CCCCCceE-
Confidence 22221100 000000 11122222 34567778899999999999987755432 23344443
Q ss_pred CCCCeEEEEeCCCCEEEeecCCC
Q 022074 262 PSQPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 262 p~~~~las~s~Dg~i~~Wd~~~~ 284 (303)
++..|..++.++.+..+|....
T Consensus 276 -~~~~l~~~~~~g~l~~~d~~tG 297 (376)
T 3q7m_A 276 -DGNRIYLVDQNDRVMALTIDGG 297 (376)
T ss_dssp -ETTEEEEEETTCCEEEEETTTC
T ss_pred -ECCEEEEEcCCCeEEEEECCCC
Confidence 4566777778889998887543
No 243
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.72 E-value=0.00091 Score=64.96 Aligned_cols=116 Identities=12% Similarity=0.144 Sum_probs=66.8
Q ss_pred Cccc-ceEEEEEc-CCCCEEEEeeC-CC----eEEEEECCCC-ceEE-EEecccCCeEEEEEccCCCcEEEEecCC----
Q 022074 37 GYSF-GIFSLKFS-TDGRELVAGSS-DD----CIYVYDLEAN-KLSL-RILAHTSDVNTVCFGDESGHLIYSGSDD---- 103 (303)
Q Consensus 37 ~~~~-~v~~l~~s-~~g~~l~sgs~-Dg----~v~lwd~~~~-~~~~-~~~~h~~~v~~l~~~~~~~~~l~s~s~d---- 103 (303)
+|+. .+.+.+|| |||++|+-+.. +| +|+++|+.++ .... .+. .....+.|+++ ++.|+....+
T Consensus 170 ~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspD-g~~l~y~~~d~~~~ 245 (751)
T 2xe4_A 170 GKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPD-HTSLFYVTKDETLR 245 (751)
T ss_dssp TCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSS-TTEEEEEEECTTCC
T ss_pred CCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecC-CCEEEEEEECCCCC
Confidence 5664 78899999 99998775432 22 5999999998 5321 111 11346789765 5555544443
Q ss_pred -CeEEEEcCccccCCCccceeecc-cccCeEEEEeCCCCCEEEEEeC---CCcEEEEEcc
Q 022074 104 -NLCKVWDRRCLNVKGKPAGVLMG-HLEGITFIDSRGDGRYLISNGK---DQAIKLWDIR 158 (303)
Q Consensus 104 -g~v~lWd~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~---D~~v~lWdl~ 158 (303)
..|+++++.... ......+.. ...-...+.+++||++|+..+. ...|.++|+.
T Consensus 246 ~~~v~~~~lgt~~--~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~ 303 (751)
T 2xe4_A 246 ENKVWRHVMGKLQ--SEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLR 303 (751)
T ss_dssp EEEEEEEETTSCG--GGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESS
T ss_pred CCEEEEEECCCCc--hhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECC
Confidence 257777764211 111122221 1223456789999998875542 3345555654
No 244
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.70 E-value=0.015 Score=48.34 Aligned_cols=178 Identities=11% Similarity=0.059 Sum_probs=103.8
Q ss_pred ceEEEEEcCCCCEEEEe-eCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecC--CCeEEEEcCccccCC
Q 022074 41 GIFSLKFSTDGRELVAG-SSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSD--DNLCKVWDRRCLNVK 117 (303)
Q Consensus 41 ~v~~l~~s~~g~~l~sg-s~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~--dg~v~lWd~~~~~~~ 117 (303)
....+++++++..++.+ ...+.|.+++++.................+++.++.+.++++-.. .+.|..++...
T Consensus 80 ~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg---- 155 (267)
T 1npe_A 80 SPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG---- 155 (267)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS----
T ss_pred CccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC----
Confidence 46789999976665554 456789999987654322222222456888887655655555543 46887777542
Q ss_pred Cccceeec-ccccCeEEEEeCCCCCE-EEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCC
Q 022074 118 GKPAGVLM-GHLEGITFIDSRGDGRY-LISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQ 195 (303)
Q Consensus 118 ~~~~~~~~-~h~~~v~~~~~~~~~~~-l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (303)
.....+. ........+++++++.. +++....+.|..+|+...... .
T Consensus 156 -~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~----------~--------------------- 203 (267)
T 1npe_A 156 -TNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRR----------K--------------------- 203 (267)
T ss_dssp -CCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEE----------E---------------------
T ss_pred -CCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceE----------E---------------------
Confidence 1111221 12234567888887655 456666788998887521100 0
Q ss_pred cceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEeecCC-CCeEEEEECCCCC
Q 022074 196 SVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHT-SPVRDCSWHPSQP 265 (303)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~h~-~~I~~v~~sp~~~ 265 (303)
...+..... ..... ++.++++....+.|..+|..+++.+..+.... .....+++.|++.
T Consensus 204 ---~~~~~~~P~-------gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 204 ---VLEGLQYPF-------AVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp ---EEECCCSEE-------EEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred ---EecCCCCce-------EEEEe-CCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCccC
Confidence 000000000 00111 34555555567899999999999888876443 2467888888764
No 245
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.63 E-value=0.0059 Score=58.24 Aligned_cols=112 Identities=13% Similarity=0.158 Sum_probs=66.3
Q ss_pred EEEEcC-CCCEEEEeeCCC-----------eEEEEECCCCceEE--EEe-cccCCeEEEEEccCCCcEEEEecC-CCeEE
Q 022074 44 SLKFST-DGRELVAGSSDD-----------CIYVYDLEANKLSL--RIL-AHTSDVNTVCFGDESGHLIYSGSD-DNLCK 107 (303)
Q Consensus 44 ~l~~s~-~g~~l~sgs~Dg-----------~v~lwd~~~~~~~~--~~~-~h~~~v~~l~~~~~~~~~l~s~s~-dg~v~ 107 (303)
++++.+ +|+.++.|+.+. .+.+||..+++... .+. .+......+++. .++++++.|+. +..+.
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~-~~g~lyv~GG~~~~~v~ 268 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMD-GNGQIVVTGGNDAKKTS 268 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEEC-TTSCEEEECSSSTTCEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCC-CCCCEEEeCCCCCCceE
Confidence 455666 888888887643 58899998876321 121 233334445554 35788888884 55899
Q ss_pred EEcCccccCCCccceeecccccCeEEEEeCCCCCEEEEEe-CC-----CcEEEEEccc
Q 022074 108 VWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNG-KD-----QAIKLWDIRK 159 (303)
Q Consensus 108 lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~D-----~~v~lWdl~~ 159 (303)
+||.... .......+..... -..+...++++.++.|| .+ ..+.+||...
T Consensus 269 ~yd~~t~--~W~~~~~~~~~R~-~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t 323 (656)
T 1k3i_A 269 LYDSSSD--SWIPGPDMQVARG-YQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSS 323 (656)
T ss_dssp EEEGGGT--EEEECCCCSSCCS-SCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTT
T ss_pred EecCcCC--ceeECCCCCcccc-ccceEEecCCeEEEEeCcccCCcccccceEeCCCC
Confidence 9997522 1111111111111 12333456888889988 44 5788898754
No 246
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.59 E-value=0.024 Score=47.31 Aligned_cols=210 Identities=13% Similarity=0.119 Sum_probs=119.2
Q ss_pred CCcccceEEEEEcCCCCEEEE-eeCCCeEEEEECCCCceEEEEe-cccCCeEEEEEccCCCcEEEEecCCCeEEEEcCcc
Q 022074 36 GGYSFGIFSLKFSTDGRELVA-GSSDDCIYVYDLEANKLSLRIL-AHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRC 113 (303)
Q Consensus 36 ~~~~~~v~~l~~s~~g~~l~s-gs~Dg~v~lwd~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~ 113 (303)
.|-...+..++|+|+++.|++ ...++.|...|+. ++...++. .-......+++. .++.++++.-.++.+.++++..
T Consensus 23 ~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~-~~g~~~vs~E~~~~l~~~~v~~ 100 (255)
T 3qqz_A 23 AGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYI-GDNQFVISDERDYAIYVISLTP 100 (255)
T ss_dssp TTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEEC-STTEEEEEETTTTEEEEEEECT
T ss_pred CCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEe-CCCEEEEEECCCCcEEEEEcCC
Confidence 455556999999998776665 6678889889987 66655543 222467788885 3455666666677888887542
Q ss_pred ccCCCccceee------cccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCc
Q 022074 114 LNVKGKPAGVL------MGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQAR 187 (303)
Q Consensus 114 ~~~~~~~~~~~------~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (303)
... ....... .........+++.+.++.|.++..-....+|.++....... ... ....
T Consensus 101 ~~~-i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~----l~i-~~~~---------- 164 (255)
T 3qqz_A 101 NSE-VKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNE----LHI-SKDK---------- 164 (255)
T ss_dssp TCC-EEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSC----CEE-EECH----------
T ss_pred CCe-eeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCc----eee-ecch----------
Confidence 211 0001111 11234578899999887776666555566666542110000 000 0000
Q ss_pred cccCCCCCcceEEecccceeeeEEEeeeeeee-CCCeEEEEEeCCCeEEEEECCCCeEEEEeecCC---------CCeEE
Q 022074 188 DLKHPCDQSVATYKGHSVLRTLIRCHFSPVYS-TGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHT---------SPVRD 257 (303)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-~~~~~latg~~dg~i~iwd~~~~~~~~~~~~h~---------~~I~~ 257 (303)
. +.+......... ..+. ..+.+++...+.+.+..+|.+ |+.+..+.-.. ..-..
T Consensus 165 ~-----------~~~~~~~~d~S~----l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEG 228 (255)
T 3qqz_A 165 A-----------LQRQFTLDDVSG----AEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEG 228 (255)
T ss_dssp H-----------HHHTCCSSCCCE----EEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEE
T ss_pred h-----------hccccccCCcee----EEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCe
Confidence 0 000000000111 1122 246777778888999999975 55555543221 36789
Q ss_pred EEECCCCCeEEEEeCCCCEEEee
Q 022074 258 CSWHPSQPMLVSSSWDGDVVRWE 280 (303)
Q Consensus 258 v~~sp~~~~las~s~Dg~i~~Wd 280 (303)
|+|.++|++.++ ++-+.++++.
T Consensus 229 ia~d~~G~lyIv-sE~n~~y~f~ 250 (255)
T 3qqz_A 229 VAMDASGNIYIV-SEPNRFYRFT 250 (255)
T ss_dssp EEECTTCCEEEE-ETTTEEEEEE
T ss_pred eEECCCCCEEEE-cCCceEEEEE
Confidence 999999996666 6666555554
No 247
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.50 E-value=0.032 Score=47.81 Aligned_cols=196 Identities=8% Similarity=0.102 Sum_probs=109.8
Q ss_pred ceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecc-----cCCeEEEEEccCCCcEEEEecC-------------
Q 022074 41 GIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAH-----TSDVNTVCFGDESGHLIYSGSD------------- 102 (303)
Q Consensus 41 ~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h-----~~~v~~l~~~~~~~~~l~s~s~------------- 102 (303)
...++++.+++..|+++...+.+..+|..++... .+... ....+.+++.+.++++.++-..
T Consensus 81 ~p~gi~~~~~~g~l~v~d~~~~i~~~d~~~g~~~-~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~ 159 (322)
T 2fp8_A 81 RTYDISYNLQNNQLYIVDCYYHLSVVGSEGGHAT-QLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMD 159 (322)
T ss_dssp CEEEEEEETTTTEEEEEETTTEEEEECTTCEECE-EEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHH
T ss_pred CCceEEEcCCCCcEEEEECCCCEEEEeCCCCEEE-EecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehc
Confidence 4788999973344665655556888887765432 22211 1246778885415677665432
Q ss_pred ----CCeEEEEcCccccCCCccceeecccccCeEEEEeCCCCCEE-EEEeCCCcEEEEEcccccCCcccccCccceeeec
Q 022074 103 ----DNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYL-ISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDY 177 (303)
Q Consensus 103 ----dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~ 177 (303)
++.|..+|... .. ...+.........++++++++.| ++....+.|..|++..... .. ...
T Consensus 160 ~~~~~g~v~~~d~~~----~~-~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~-~~----~~~----- 224 (322)
T 2fp8_A 160 TSDKTGRLIKYDPST----KE-TTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKK-GT----AEV----- 224 (322)
T ss_dssp HTCCCEEEEEEETTT----TE-EEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTT-TC----EEE-----
T ss_pred ccCCCceEEEEeCCC----CE-EEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcC-Cc----cce-----
Confidence 36677777531 11 11111112234567889998855 5556678899998753110 00 000
Q ss_pred eeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeC----------CCeEEEEECCCCeEEEE
Q 022074 178 RWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSH----------DSCVYVYDLVSGEQVAA 247 (303)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~----------dg~i~iwd~~~~~~~~~ 247 (303)
.....+ .. ...+.++|.+.++... .+.|..+|.. ++.+..
T Consensus 225 -------------------~~~~~g---P~-------gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~ 274 (322)
T 2fp8_A 225 -------------------LVKIPN---PG-------NIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEV 274 (322)
T ss_dssp -------------------EEECSS---EE-------EEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEE
T ss_pred -------------------EEeCCC---CC-------CeEECCCCCEEEEecCcccccccCCCccEEEEECCC-CCEEEE
Confidence 000000 00 0123456666555544 4678888874 777666
Q ss_pred eecCC----CCeEEEEECCCCCeEEEEeCCCCEEEeecCC
Q 022074 248 LKYHT----SPVRDCSWHPSQPMLVSSSWDGDVVRWEFPG 283 (303)
Q Consensus 248 ~~~h~----~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~ 283 (303)
+.... ..++.+++ .+++++++...++.|.+++++.
T Consensus 275 ~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 275 IPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp EECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred EECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 65432 35777777 5677788877888899998753
No 248
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.25 E-value=0.034 Score=46.68 Aligned_cols=156 Identities=10% Similarity=0.014 Sum_probs=92.4
Q ss_pred cccC--CeEEEEEccCCCcEEEEecC--CCeEEEEcCccccCCCccceeec--ccccCeEEEEeCCCCCEEEEEeCCCcE
Q 022074 79 AHTS--DVNTVCFGDESGHLIYSGSD--DNLCKVWDRRCLNVKGKPAGVLM--GHLEGITFIDSRGDGRYLISNGKDQAI 152 (303)
Q Consensus 79 ~h~~--~v~~l~~~~~~~~~l~s~s~--dg~v~lWd~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~~~D~~v 152 (303)
.|.. ....+.|+++ +.++++.+. +++|++.|+.. ++....+. .+.. ...+++. .+++.++.-.++.+
T Consensus 16 p~~~~~f~~Gl~~~~d-g~Lyvstg~~~~s~v~~iD~~t----g~v~~~i~l~~~~f-geGi~~~-g~~lyv~t~~~~~v 88 (266)
T 2iwa_A 16 PHDPYAFTQGLVYAEN-DTLFESTGLYGRSSVRQVALQT----GKVENIHKMDDSYF-GEGLTLL-NEKLYQVVWLKNIG 88 (266)
T ss_dssp ECCTTCCEEEEEECST-TEEEEEECSTTTCEEEEEETTT----CCEEEEEECCTTCC-EEEEEEE-TTEEEEEETTCSEE
T ss_pred ECCCCCCcccEEEeCC-CeEEEECCCCCCCEEEEEECCC----CCEEEEEecCCCcc-eEEEEEe-CCEEEEEEecCCEE
Confidence 4543 3578889754 666665543 67999999863 33333321 1111 1233343 23445556678999
Q ss_pred EEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCC
Q 022074 153 KLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDS 232 (303)
Q Consensus 153 ~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg 232 (303)
.++|....+..... .++ . ++. ...++|++.++++..++
T Consensus 89 ~viD~~t~~v~~~i--------------~~g-~----------------~~g-----------~glt~Dg~~l~vs~gs~ 126 (266)
T 2iwa_A 89 FIYDRRTLSNIKNF--------------THQ-M----------------KDG-----------WGLATDGKILYGSDGTS 126 (266)
T ss_dssp EEEETTTTEEEEEE--------------ECC-S----------------SSC-----------CEEEECSSSEEEECSSS
T ss_pred EEEECCCCcEEEEE--------------ECC-C----------------CCe-----------EEEEECCCEEEEECCCC
Confidence 99998653321111 000 0 000 00223555555556789
Q ss_pred eEEEEECCCCeEEEEeecCC-----CCeEEEEECCCCCeEEEEeCCCCEEEeecCCC
Q 022074 233 CVYVYDLVSGEQVAALKYHT-----SPVRDCSWHPSQPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 233 ~i~iwd~~~~~~~~~~~~h~-----~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~~ 284 (303)
.|+++|..+.+.+..+..-. ..++.+.|. ++...+....++.|.+-|.+..
T Consensus 127 ~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg 182 (266)
T 2iwa_A 127 ILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDG 182 (266)
T ss_dssp EEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTC
T ss_pred eEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCC
Confidence 99999999988877765321 247889998 7777777767789999887654
No 249
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.19 E-value=0.041 Score=46.05 Aligned_cols=154 Identities=10% Similarity=0.043 Sum_probs=94.0
Q ss_pred cccC--CeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCccceeecccccC-eEEEEeCCCCCEEEEEeCCCcEEEE
Q 022074 79 AHTS--DVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEG-ITFIDSRGDGRYLISNGKDQAIKLW 155 (303)
Q Consensus 79 ~h~~--~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~-v~~~~~~~~~~~l~s~~~D~~v~lW 155 (303)
.|+. ....+.|. .+.++++.+.+|.|+.+|++.. +....+.. ... -..+++.. +++....-.++.+.++
T Consensus 50 phd~~~ftqGL~~~--~~~Ly~stG~~g~v~~iD~~Tg----kv~~~~l~-~~~FgeGit~~g-~~Ly~ltw~~~~v~V~ 121 (268)
T 3nok_A 50 PHATNAFTQGLVFH--QGHFFESTGHQGTLRQLSLESA----QPVWMERL-GNIFAEGLASDG-ERLYQLTWTEGLLFTW 121 (268)
T ss_dssp ECCTTCCEEEEEEE--TTEEEEEETTTTEEEECCSSCS----SCSEEEEC-TTCCEEEEEECS-SCEEEEESSSCEEEEE
T ss_pred cCCCccccceEEEE--CCEEEEEcCCCCEEEEEECCCC----cEEeEECC-CCcceeEEEEeC-CEEEEEEccCCEEEEE
Confidence 5553 45678885 3678888999999999998643 33333211 111 12244433 3455566678999999
Q ss_pred EcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEE
Q 022074 156 DIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVY 235 (303)
Q Consensus 156 dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~ 235 (303)
|....+...... +++.+ - ..+++++.|+....++.|+
T Consensus 122 D~~Tl~~~~ti~--------------~~~eG----------------w-------------GLt~Dg~~L~vSdGs~~l~ 158 (268)
T 3nok_A 122 SGMPPQRERTTR--------------YSGEG----------------W-------------GLCYWNGKLVRSDGGTMLT 158 (268)
T ss_dssp ETTTTEEEEEEE--------------CSSCC----------------C-------------CEEEETTEEEEECSSSEEE
T ss_pred ECCcCcEEEEEe--------------CCCce----------------e-------------EEecCCCEEEEECCCCEEE
Confidence 987543322111 10000 0 0112345555555689999
Q ss_pred EEECCCCeEEEEeecCC-----CCeEEEEECCCCCeEEEEeCCCCEEEeecCCC
Q 022074 236 VYDLVSGEQVAALKYHT-----SPVRDCSWHPSQPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 236 iwd~~~~~~~~~~~~h~-----~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~~ 284 (303)
++|..+.+.+..+.... ..++.+.|. +|+..|..-.+..|.+-|.+..
T Consensus 159 ~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG 211 (268)
T 3nok_A 159 FHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATG 211 (268)
T ss_dssp EECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTC
T ss_pred EEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCC
Confidence 99999999887775322 256788887 7777766666778888886543
No 250
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.18 E-value=0.014 Score=55.91 Aligned_cols=52 Identities=10% Similarity=0.189 Sum_probs=35.4
Q ss_pred CCCeEEEEEeCCCeEEEEECCCCeEEEEeecCCCC-eEEEEECCCCC-eEEEEe
Q 022074 220 TGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSP-VRDCSWHPSQP-MLVSSS 271 (303)
Q Consensus 220 ~~~~~latg~~dg~i~iwd~~~~~~~~~~~~h~~~-I~~v~~sp~~~-~las~s 271 (303)
..+.+++.|+.|+.++.||.++|+.+..++....- -.-+.+..+|+ +++.++
T Consensus 467 t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G~~yva~~~ 520 (668)
T 1kv9_A 467 TAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYVAIMA 520 (668)
T ss_dssp ETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred eCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEECCEEEEEEEe
Confidence 34667888999999999999999998887654311 12234456776 444444
No 251
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.16 E-value=0.027 Score=47.04 Aligned_cols=155 Identities=14% Similarity=0.130 Sum_probs=90.5
Q ss_pred cccC--CeEEEEEccCCCcEEEEecCCC--eEEEEcCccccCCCccceeecccccCe-EEEEeCCCCCEEEEEeCCCcEE
Q 022074 79 AHTS--DVNTVCFGDESGHLIYSGSDDN--LCKVWDRRCLNVKGKPAGVLMGHLEGI-TFIDSRGDGRYLISNGKDQAIK 153 (303)
Q Consensus 79 ~h~~--~v~~l~~~~~~~~~l~s~s~dg--~v~lWd~~~~~~~~~~~~~~~~h~~~v-~~~~~~~~~~~l~s~~~D~~v~ 153 (303)
.|+. ....+.|. + +.++.+.+.+| +|+.+|++. ++............ ..++.. .+++.+..-.++.+.
T Consensus 38 phd~~~ftqGL~~~-~-~~LyestG~~g~S~v~~vD~~T----gkv~~~~~l~~~~FgeGit~~-g~~ly~ltw~~~~v~ 110 (262)
T 3nol_A 38 PHDTKAFTEGFFYR-N-GYFYESTGLNGRSSIRKVDIES----GKTLQQIELGKRYFGEGISDW-KDKIVGLTWKNGLGF 110 (262)
T ss_dssp ECCTTCEEEEEEEE-T-TEEEEEEEETTEEEEEEECTTT----CCEEEEEECCTTCCEEEEEEE-TTEEEEEESSSSEEE
T ss_pred cCCCCcccceEEEE-C-CEEEEECCCCCCceEEEEECCC----CcEEEEEecCCccceeEEEEe-CCEEEEEEeeCCEEE
Confidence 5554 34678885 3 57777887766 999999863 33333332211111 123332 233444555689999
Q ss_pred EEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCe
Q 022074 154 LWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSC 233 (303)
Q Consensus 154 lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~ 233 (303)
++|....+....... +.. | ..++++++.|+....++.
T Consensus 111 v~D~~t~~~~~ti~~--------------~~e----------------G-------------~glt~dg~~L~~SdGs~~ 147 (262)
T 3nol_A 111 VWNIRNLRQVRSFNY--------------DGE----------------G-------------WGLTHNDQYLIMSDGTPV 147 (262)
T ss_dssp EEETTTCCEEEEEEC--------------SSC----------------C-------------CCEEECSSCEEECCSSSE
T ss_pred EEECccCcEEEEEEC--------------CCC----------------c-------------eEEecCCCEEEEECCCCe
Confidence 999875443221111 000 0 001224454555555788
Q ss_pred EEEEECCCCeEEEEeecC--C---CCeEEEEECCCCCeEEEEeCCCCEEEeecCCC
Q 022074 234 VYVYDLVSGEQVAALKYH--T---SPVRDCSWHPSQPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 234 i~iwd~~~~~~~~~~~~h--~---~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~~ 284 (303)
|+++|..+.+.+..+... . ..++.+.|. +|+..|..-.+..|.+-|.+..
T Consensus 148 i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG 202 (262)
T 3nol_A 148 LRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETG 202 (262)
T ss_dssp EEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTC
T ss_pred EEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCC
Confidence 999999999888776542 1 346678886 7777776666778888876543
No 252
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.11 E-value=0.0049 Score=52.65 Aligned_cols=214 Identities=13% Similarity=0.062 Sum_probs=105.5
Q ss_pred EEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCccceeec
Q 022074 46 KFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLM 125 (303)
Q Consensus 46 ~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~ 125 (303)
....+| .+.+++.++.|..|| .+++...........+..+... .++ .+..++.+ +..+|.. . ...-.+.
T Consensus 26 ~~d~~g-~l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~-~~g-~l~v~t~~--l~~~d~~-g----~~~~~~~ 94 (330)
T 3hxj_A 26 ILAKNG-TIYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIG-KDG-TIYFGSDK--VYAINPD-G----TEKWRFD 94 (330)
T ss_dssp EECTTS-CEECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEET-TTT-EECCSSCE--EEEECCC-G----GGGGGSC
T ss_pred eEccCC-eEEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEe-cCC-cEEEecCc--EEEECCC-C----cEEEEEE
Confidence 344444 577788888899999 7777543333233334555553 334 45556555 8888742 1 1111111
Q ss_pred ccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccc
Q 022074 126 GHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSV 205 (303)
Q Consensus 126 ~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (303)
..........+. +..+..++.++.+..+|.. ............. ....................+..++....
T Consensus 95 ~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~----~~~~~~~~~g~l~vgt~~~~l~~~d~~g~ 167 (330)
T 3hxj_A 95 TKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAI----YATPIVSEDGTIYVGSNDNYLYAINPDGT 167 (330)
T ss_dssp C-----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECSSCC----CSCCEECTTSCEEEECTTSEEEEECTTSC
T ss_pred CCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCce----eeeeEEcCCCEEEEEcCCCEEEEECCCCC
Confidence 111111111222 4467778888999999875 2211111100000 00000000111111111122333332211
Q ss_pred eeeeEE----EeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEECCCCCeEEEEeCCCCEEEeec
Q 022074 206 LRTLIR----CHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEF 281 (303)
Q Consensus 206 ~~~~~~----~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~ 281 (303)
...... ....+....++ .+..++ +.+..+| .+++.+..+......+.++...+++.+.+ ++.++.+..++.
T Consensus 168 ~~~~~~~~~~~~~~~~~d~~g-~l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v-~t~~~gl~~~~~ 242 (330)
T 3hxj_A 168 EKWRFKTNDAITSAASIGKDG-TIYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTIYV-TSLDGHLYAINP 242 (330)
T ss_dssp EEEEEECSSCCCSCCEECTTC-CEEEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCEEE-EETTTEEEEECT
T ss_pred EeEEEecCCCceeeeEEcCCC-EEEEEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeEEE-EcCCCeEEEECC
Confidence 110000 11123333444 488777 7889999 67777766666666788999988876544 556899999975
Q ss_pred C
Q 022074 282 P 282 (303)
Q Consensus 282 ~ 282 (303)
.
T Consensus 243 ~ 243 (330)
T 3hxj_A 243 D 243 (330)
T ss_dssp T
T ss_pred C
Confidence 3
No 253
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.98 E-value=0.17 Score=44.65 Aligned_cols=195 Identities=8% Similarity=0.003 Sum_probs=108.4
Q ss_pred ceEEEEEcCCCCEEEEe-eCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCc
Q 022074 41 GIFSLKFSTDGRELVAG-SSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGK 119 (303)
Q Consensus 41 ~v~~l~~s~~g~~l~sg-s~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~ 119 (303)
...+++|.+.++.|+.. ...+.|+.++++++.....+.........+++.+..++++++-...+.|.+.++... .
T Consensus 117 ~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~----~ 192 (386)
T 3v65_B 117 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA----H 192 (386)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSC----S
T ss_pred ccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCC----c
Confidence 36789999766655544 467789999988765433333223345677775555667777777788888876411 1
Q ss_pred cceeecccccCeEEEEeCCCCCEE-EEEeCC-CcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcc
Q 022074 120 PAGVLMGHLEGITFIDSRGDGRYL-ISNGKD-QAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSV 197 (303)
Q Consensus 120 ~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~D-~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (303)
....+.........+++.|.+..| ++-... +.|...++......
T Consensus 193 ~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~---------------------------------- 238 (386)
T 3v65_B 193 RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR---------------------------------- 238 (386)
T ss_dssp CEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE----------------------------------
T ss_pred eEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcE----------------------------------
Confidence 111222223445677788755544 444344 56666665321000
Q ss_pred eEEecccceeeeEEEeeeeeeeC-CCeEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEECCCCCeEEEEeCCCCE
Q 022074 198 ATYKGHSVLRTLIRCHFSPVYST-GQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDV 276 (303)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~s~-~~~~latg~~dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~~las~s~Dg~i 276 (303)
.+.... +.......+++ ++++.++-...+.|+.+|+........+.........+++ ..+.++++-...+.|
T Consensus 239 -~~~~~~-----~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V 311 (386)
T 3v65_B 239 -IIADTH-----LFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSI 311 (386)
T ss_dssp -EEECSS-----CSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEE
T ss_pred -EEEECC-----CCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCeE
Confidence 000000 00001122443 3455555667788999998643322223333445678888 455667777677888
Q ss_pred EEee
Q 022074 277 VRWE 280 (303)
Q Consensus 277 ~~Wd 280 (303)
...+
T Consensus 312 ~~~~ 315 (386)
T 3v65_B 312 NSAN 315 (386)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8887
No 254
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.96 E-value=0.091 Score=43.39 Aligned_cols=155 Identities=14% Similarity=0.195 Sum_probs=90.0
Q ss_pred cccC--CeEEEEEccCCCcEEEEecCC--CeEEEEcCccccCCCccceeecccccCe-EEEEeCCCCCEEEEEeCCCcEE
Q 022074 79 AHTS--DVNTVCFGDESGHLIYSGSDD--NLCKVWDRRCLNVKGKPAGVLMGHLEGI-TFIDSRGDGRYLISNGKDQAIK 153 (303)
Q Consensus 79 ~h~~--~v~~l~~~~~~~~~l~s~s~d--g~v~lWd~~~~~~~~~~~~~~~~h~~~v-~~~~~~~~~~~l~s~~~D~~v~ 153 (303)
.|+. .+-.+.|.. +.++.+.+.+ +.|+.+|+.. ++......-..... ..+++. .+++....-.++.+.
T Consensus 16 phd~~~ftqGL~~~~--~~LyestG~~g~S~v~~vD~~t----gkv~~~~~l~~~~fgeGi~~~-~~~ly~ltw~~~~v~ 88 (243)
T 3mbr_X 16 PHDTTAFTEGLFYLR--GHLYESTGETGRSSVRKVDLET----GRILQRAEVPPPYFGAGIVAW-RDRLIQLTWRNHEGF 88 (243)
T ss_dssp ECCTTCCEEEEEEET--TEEEEEECCTTSCEEEEEETTT----CCEEEEEECCTTCCEEEEEEE-TTEEEEEESSSSEEE
T ss_pred CCCCccccccEEEEC--CEEEEECCCCCCceEEEEECCC----CCEEEEEeCCCCcceeEEEEe-CCEEEEEEeeCCEEE
Confidence 5653 566888853 5677777775 4999999863 33333322111110 122332 244555566789999
Q ss_pred EEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCe
Q 022074 154 LWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSC 233 (303)
Q Consensus 154 lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~ 233 (303)
++|...++....... + ++. + ...++++.|+....++.
T Consensus 89 v~D~~tl~~~~ti~~--------------~------------------~~G---------w--glt~dg~~L~vSdgs~~ 125 (243)
T 3mbr_X 89 VYDLATLTPRARFRY--------------P------------------GEG---------W--ALTSDDSHLYMSDGTAV 125 (243)
T ss_dssp EEETTTTEEEEEEEC--------------S------------------SCC---------C--EEEECSSCEEEECSSSE
T ss_pred EEECCcCcEEEEEeC--------------C------------------CCc---------e--EEeeCCCEEEEECCCCe
Confidence 999875443222111 0 000 0 01123444444455889
Q ss_pred EEEEECCCCeEEEEeecCC-----CCeEEEEECCCCCeEEEEeCCCCEEEeecCCC
Q 022074 234 VYVYDLVSGEQVAALKYHT-----SPVRDCSWHPSQPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 234 i~iwd~~~~~~~~~~~~h~-----~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~~ 284 (303)
|+++|..+.+.+..++... ..++.+.|. +|+..|..-.+..|.+-|.+..
T Consensus 126 l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG 180 (243)
T 3mbr_X 126 IRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASG 180 (243)
T ss_dssp EEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTC
T ss_pred EEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCC
Confidence 9999999998887775422 356778876 6776666656777777776543
No 255
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.93 E-value=0.03 Score=52.58 Aligned_cols=51 Identities=16% Similarity=0.283 Sum_probs=36.1
Q ss_pred CeEEEEEeCCCeEEEEECCCCeEEEEeecCCCC-eEEEEECCCCC-eEEEEeC
Q 022074 222 QKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSP-VRDCSWHPSQP-MLVSSSW 272 (303)
Q Consensus 222 ~~~latg~~dg~i~iwd~~~~~~~~~~~~h~~~-I~~v~~sp~~~-~las~s~ 272 (303)
+.+++.|+.||.++.||.++|+++-.++....- -.-+.|..+|+ +++..+.
T Consensus 497 gglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~~~~G 549 (582)
T 1flg_A 497 GNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGVTVG 549 (582)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEEC
T ss_pred CCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEEEEEEcc
Confidence 456777999999999999999998887654321 12256778887 4554443
No 256
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.84 E-value=0.21 Score=47.02 Aligned_cols=52 Identities=10% Similarity=0.087 Sum_probs=35.3
Q ss_pred CCeEEEEEeCCCeEEEEECCCCeEEEEeecCCC-CeEEEEECCCCC-eEEEEeC
Q 022074 221 GQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTS-PVRDCSWHPSQP-MLVSSSW 272 (303)
Q Consensus 221 ~~~~latg~~dg~i~iwd~~~~~~~~~~~~h~~-~I~~v~~sp~~~-~las~s~ 272 (303)
.+.++..++.|+.++.+|.++|+++-.++.... ...-+.|..+|+ ++++.+.
T Consensus 483 agg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~qyv~~~~G 536 (599)
T 1w6s_A 483 AGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQYVAIYYG 536 (599)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEEC
T ss_pred cCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEEEEEEEcc
Confidence 355677799999999999999999877764321 112245667887 4544443
No 257
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.78 E-value=0.035 Score=52.87 Aligned_cols=70 Identities=11% Similarity=0.127 Sum_probs=44.5
Q ss_pred eEEEEEcCCCCEEEEeeC-CCeEEEEECCCCceEEEEecccCCe-EEEEEccCCCcEEEEec-CC-----CeEEEEcCc
Q 022074 42 IFSLKFSTDGRELVAGSS-DDCIYVYDLEANKLSLRILAHTSDV-NTVCFGDESGHLIYSGS-DD-----NLCKVWDRR 112 (303)
Q Consensus 42 v~~l~~s~~g~~l~sgs~-Dg~v~lwd~~~~~~~~~~~~h~~~v-~~l~~~~~~~~~l~s~s-~d-----g~v~lWd~~ 112 (303)
..++++..+|+.++.|+. +..+.+||..+++....-.-+.... .+++.. +++++++.|+ .+ ..+.+||..
T Consensus 245 ~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~-~dg~iyv~GG~~~~~~~~~~~e~yd~~ 322 (656)
T 1k3i_A 245 CPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATM-SDGRVFTIGGSWSGGVFEKNGEVYSPS 322 (656)
T ss_dssp SCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEEC-TTSCEEEECCCCCSSSCCCCEEEEETT
T ss_pred cccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEe-cCCeEEEEeCcccCCcccccceEeCCC
Confidence 345677889999999984 5589999998876432111111111 233332 3577888888 34 568889875
No 258
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=96.72 E-value=0.019 Score=50.76 Aligned_cols=91 Identities=13% Similarity=-0.043 Sum_probs=61.6
Q ss_pred eEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEec----------CCCeEEEEcCccccCCCccceeeccc----
Q 022074 62 CIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGS----------DDNLCKVWDRRCLNVKGKPAGVLMGH---- 127 (303)
Q Consensus 62 ~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s----------~dg~v~lWd~~~~~~~~~~~~~~~~h---- 127 (303)
+|.++|..+++...++..-..+ .+.++|+ ++.++.+. .+++|.+||... .+....+..+
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spD-g~~lyVan~~~~r~~~G~~~~~VsviD~~T----~~vv~~I~v~~~~~ 119 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHS-GSDFALASTSFARSAKGKRTDYVEVFDPVT----FLPIADIELPDAPR 119 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTT-SSCEEEEEEEETTTTSSSEEEEEEEECTTT----CCEEEEEEETTSCS
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCC-CCEEEEEcccccccccCCCCCEEEEEECCC----CCEEEEEECCCccc
Confidence 8899999999988777654445 6889765 44444443 478999999863 3333333211
Q ss_pred ---ccCeEEEEeCCCCCEEEEEeC--CCcEEE--EEccc
Q 022074 128 ---LEGITFIDSRGDGRYLISNGK--DQAIKL--WDIRK 159 (303)
Q Consensus 128 ---~~~v~~~~~~~~~~~l~s~~~--D~~v~l--Wdl~~ 159 (303)
...-..+.++|||++++.+.. +..+.+ +|+..
T Consensus 120 ~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 120 FSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp CCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred cccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 122346678999999988874 467888 88753
No 259
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.70 E-value=0.23 Score=42.02 Aligned_cols=222 Identities=12% Similarity=0.003 Sum_probs=106.5
Q ss_pred ceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecC-CC-eEEEEcCccccCCC
Q 022074 41 GIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSD-DN-LCKVWDRRCLNVKG 118 (303)
Q Consensus 41 ~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~-dg-~v~lWd~~~~~~~~ 118 (303)
....++|+++|+.+++-..++.|..||..++. . ...........+++.+ +++++++... ++ .|..+|... +
T Consensus 33 ~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~-~-~~~~~~~~p~gia~~~-dG~l~vad~~~~~~~v~~~d~~~----g 105 (306)
T 2p4o_A 33 FLENLASAPDGTIFVTNHEVGEIVSITPDGNQ-Q-IHATVEGKVSGLAFTS-NGDLVATGWNADSIPVVSLVKSD----G 105 (306)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTCCE-E-EEEECSSEEEEEEECT-TSCEEEEEECTTSCEEEEEECTT----S
T ss_pred CcceEEECCCCCEEEEeCCCCeEEEECCCCce-E-EEEeCCCCceeEEEcC-CCcEEEEeccCCcceEEEEcCCC----C
Confidence 36789999999866666678899999887643 2 2223334678888864 4666655433 22 455555432 1
Q ss_pred ccceeec-ccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccC-C----cccc--cCccceeeeceeeeCCCCCcccc
Q 022074 119 KPAGVLM-GHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSS-N----ASCN--LGFRSYEWDYRWMDYPPQARDLK 190 (303)
Q Consensus 119 ~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~-~----~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 190 (303)
+...... ........+...+++..+++...++.|..+|...... . .... ........ ...+ .++...+.
T Consensus 106 ~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~-pngi--s~dg~~ly 182 (306)
T 2p4o_A 106 TVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPA-ANGL--KRFGNFLY 182 (306)
T ss_dssp CEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCS-EEEE--EEETTEEE
T ss_pred eEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCc-CCCc--CcCCCEEE
Confidence 1111110 0111123333344454455555678888888642100 0 0000 00000000 0000 11111110
Q ss_pred --CCCCCcceEEeccc--ce--eeeE-E--EeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEE--EeecCCCCeEEEE
Q 022074 191 --HPCDQSVATYKGHS--VL--RTLI-R--CHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVA--ALKYHTSPVRDCS 259 (303)
Q Consensus 191 --~~~~~~~~~~~~~~--~~--~~~~-~--~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~--~~~~h~~~I~~v~ 259 (303)
......+..++-.. .. .... . ......+.++|.+.++....+.|.++|.. ++... .+.......++++
T Consensus 183 v~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a 261 (306)
T 2p4o_A 183 VSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVA 261 (306)
T ss_dssp EEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEE
T ss_pred EEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEE
Confidence 00111222222110 00 0010 0 01112356788877777778899999975 65432 3333335689999
Q ss_pred EC---CCCCeEEEEeCC
Q 022074 260 WH---PSQPMLVSSSWD 273 (303)
Q Consensus 260 ~s---p~~~~las~s~D 273 (303)
|. |+++.|..++..
T Consensus 262 ~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 262 FGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp ECCSTTTTTEEEEEECT
T ss_pred EecccCCCCEEEEECCC
Confidence 99 887755544433
No 260
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.63 E-value=0.36 Score=43.37 Aligned_cols=214 Identities=11% Similarity=0.122 Sum_probs=108.3
Q ss_pred ceEEEEEcCCCCEEEEeeCCC-----eEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCcccc
Q 022074 41 GIFSLKFSTDGRELVAGSSDD-----CIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLN 115 (303)
Q Consensus 41 ~v~~l~~s~~g~~l~sgs~Dg-----~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~ 115 (303)
....++++++|+ |+.+...+ .+..++...+...............+++.+..+.++++-..++.|+.+|...
T Consensus 183 ~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~-- 259 (433)
T 4hw6_A 183 QCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPAT-- 259 (433)
T ss_dssp CEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTT--
T ss_pred CccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCC--
Confidence 478899999999 55444321 2333433322211111112234566777654677776767788899888641
Q ss_pred CCCccceee-c-ccccCeEEEEeCCCCC-EEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCC
Q 022074 116 VKGKPAGVL-M-GHLEGITFIDSRGDGR-YLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHP 192 (303)
Q Consensus 116 ~~~~~~~~~-~-~h~~~v~~~~~~~~~~-~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (303)
+.....+ . +....-..++++++++ ++++-...+.|+.+|+......... ...+. . ...... .
T Consensus 260 --g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~-----~~~~a--g-~~g~~g--~--- 324 (433)
T 4hw6_A 260 --GTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAV-----PYIVC--G-QHSSPG--W--- 324 (433)
T ss_dssp --CCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCC-----CEEEE--E-CTTCCC--C---
T ss_pred --CeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCc-----EEEEE--e-cCCCCc--c---
Confidence 1110111 1 1112223688999998 5566667788888886431110000 00000 0 000000 0
Q ss_pred CCCcceEEecccceeeeEEEeeeeee---------eCCCeEEEEEeCCCeEEEEECCCCeEEEEeecC------------
Q 022074 193 CDQSVATYKGHSVLRTLIRCHFSPVY---------STGQKYIYTGSHDSCVYVYDLVSGEQVAALKYH------------ 251 (303)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~h------------ 251 (303)
. ++... ...+.......+ ..++.+.++-...++|+.++. +|... ++.+.
T Consensus 325 ----~---dg~~~-~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v~-t~~G~g~~~~~G~~dG~ 394 (433)
T 4hw6_A 325 ----V---DGMGT-GARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRVT-TYAGRGNSREWGYVDGE 394 (433)
T ss_dssp ----B---CEEGG-GSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEEE-EEECCCTTCSSCCBCEE
T ss_pred ----C---CCccc-ceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCEE-EEEeCCCCCccccCCCc
Confidence 0 00000 000000001122 345667777777888999985 56433 33221
Q ss_pred ------CCCeEEEEEC-CCCCeEEEEeCCCCEEEeecC
Q 022074 252 ------TSPVRDCSWH-PSQPMLVSSSWDGDVVRWEFP 282 (303)
Q Consensus 252 ------~~~I~~v~~s-p~~~~las~s~Dg~i~~Wd~~ 282 (303)
-.....++++ +++.++++=..+..|+..+++
T Consensus 395 ~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 395 LRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp TTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred cccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 1246789999 677777777777888877753
No 261
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.59 E-value=0.32 Score=42.25 Aligned_cols=193 Identities=9% Similarity=0.004 Sum_probs=108.7
Q ss_pred eEEEEEcCCCCEEEEe-eCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCcc
Q 022074 42 IFSLKFSTDGRELVAG-SSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKP 120 (303)
Q Consensus 42 v~~l~~s~~g~~l~sg-s~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~ 120 (303)
..+++|++.++.|+.. ...+.|+.+++.++.....+.........+++.+..++++++-...+.|.+.++.. ..
T Consensus 75 ~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG-----~~ 149 (349)
T 3v64_C 75 AIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDG-----AH 149 (349)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS-----CS
T ss_pred eEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCC-----Cc
Confidence 6789999766666554 46778999998876543333322344567777555566777777788899888642 11
Q ss_pred cee-ecccccCeEEEEeCCCCCE-EEEEeCC-CcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcc
Q 022074 121 AGV-LMGHLEGITFIDSRGDGRY-LISNGKD-QAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSV 197 (303)
Q Consensus 121 ~~~-~~~h~~~v~~~~~~~~~~~-l~s~~~D-~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (303)
... +.........+++.|.+.. +.+-... +.|...++...... . +. . . .+
T Consensus 150 ~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~---~---------------------~~-~-~-~~ 202 (349)
T 3v64_C 150 RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR---I---------------------IA-D-T-HL 202 (349)
T ss_dssp CEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE---E---------------------SC-C-S-SC
T ss_pred eEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcE---E---------------------EE-E-C-CC
Confidence 122 2222344567788875444 4554444 66666665421000 0 00 0 0 00
Q ss_pred eEEecccceeeeEEEeeeeeeeC-CCeEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEECCCCCeEEEEeCCCCE
Q 022074 198 ATYKGHSVLRTLIRCHFSPVYST-GQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDV 276 (303)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~s~-~~~~latg~~dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~~las~s~Dg~i 276 (303)
.......+++ ++++.++-...+.|..+|+........+.........+++ ..+.++++-...+.|
T Consensus 203 -------------~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V 268 (349)
T 3v64_C 203 -------------FWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSI 268 (349)
T ss_dssp -------------SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEE
T ss_pred -------------CCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEE-ECCEEEEecCCCCeE
Confidence 0001123454 4455555567788999998643322223333445678888 455666666667777
Q ss_pred EEee
Q 022074 277 VRWE 280 (303)
Q Consensus 277 ~~Wd 280 (303)
...+
T Consensus 269 ~~~~ 272 (349)
T 3v64_C 269 NSAN 272 (349)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7776
No 262
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.48 E-value=0.38 Score=41.87 Aligned_cols=193 Identities=13% Similarity=0.211 Sum_probs=103.4
Q ss_pred CCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccC---CCc---EEE-EecC--CCeEEEEcCccccCCCcc
Q 022074 50 DGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDE---SGH---LIY-SGSD--DNLCKVWDRRCLNVKGKP 120 (303)
Q Consensus 50 ~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~---~~~---~l~-s~s~--dg~v~lWd~~~~~~~~~~ 120 (303)
....++.-..++-+.+||+ +|++...+.. +.++.+..-+. .++ +++ +.-. +.+|++|++... . .+
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~--~-~~ 112 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGK--N-GT 112 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTT--T-CC
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCC--C-Cc
Confidence 3445665566778999999 6666555532 45565544221 111 223 3333 579999965211 1 11
Q ss_pred ceeecc------cc-cCeEEEEe--CCC-CC-EEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccc
Q 022074 121 AGVLMG------HL-EGITFIDS--RGD-GR-YLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDL 189 (303)
Q Consensus 121 ~~~~~~------h~-~~v~~~~~--~~~-~~-~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (303)
...+.. -. ..+..++. ++. +. +++..+.++.+..|++...... .. ..
T Consensus 113 l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g-~~-------~~-------------- 170 (355)
T 3amr_A 113 LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNG-YI-------SG-------------- 170 (355)
T ss_dssp EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTS-CE-------EE--------------
T ss_pred eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCC-cc-------cc--------------
Confidence 111100 01 23333444 553 43 6788888899999988532110 00 00
Q ss_pred cCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECC-----CCeEEEEee-cC-CCCeEEEEE--
Q 022074 190 KHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLV-----SGEQVAALK-YH-TSPVRDCSW-- 260 (303)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~-----~~~~~~~~~-~h-~~~I~~v~~-- 260 (303)
..+..+.-....+ .| +..+....|..+-++.-|+.+|.+ +++.+..+. ++ ...+..|+.
T Consensus 171 -----~lVR~f~lgsq~E---gc----vvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~ 238 (355)
T 3amr_A 171 -----KKVRAFKMNSQTE---GM----AADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYY 238 (355)
T ss_dssp -----EEEEEEECSSCEE---EE----EEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEE
T ss_pred -----eEEEEecCCCCcc---eE----EEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEe
Confidence 0111111111111 11 123445678888888888888855 355665542 22 247888888
Q ss_pred CCCCC-eEEEEe-CCCCEEEeecC
Q 022074 261 HPSQP-MLVSSS-WDGDVVRWEFP 282 (303)
Q Consensus 261 sp~~~-~las~s-~Dg~i~~Wd~~ 282 (303)
.++++ +|+.++ .+.++.+||.+
T Consensus 239 ~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 239 AADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp CGGGCEEEEEEEGGGTEEEEEESS
T ss_pred cCCCCEEEEEEcCCCCEEEEEECC
Confidence 56666 555555 67899999975
No 263
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.45 E-value=0.18 Score=47.07 Aligned_cols=52 Identities=10% Similarity=0.030 Sum_probs=34.8
Q ss_pred CeEEEEEeCCCeEEEEECCCCeEEEEeecCCC-CeEEEEECCCCCe-EEEEeCC
Q 022074 222 QKYIYTGSHDSCVYVYDLVSGEQVAALKYHTS-PVRDCSWHPSQPM-LVSSSWD 273 (303)
Q Consensus 222 ~~~latg~~dg~i~iwd~~~~~~~~~~~~h~~-~I~~v~~sp~~~~-las~s~D 273 (303)
+..++.++.||.++.+|.++|+++-.++.... .-.-+.+..++++ +++.+..
T Consensus 475 gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv~~~~G~ 528 (571)
T 2ad6_A 475 GGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYIGSMYGV 528 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEECC
T ss_pred CCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEEEEECCC
Confidence 44567789999999999999999887764321 1122346678874 4444444
No 264
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.35 E-value=0.08 Score=50.56 Aligned_cols=210 Identities=12% Similarity=0.063 Sum_probs=106.1
Q ss_pred CCEEEEeeCCCeEEEEECCCCceEEEEecccCC----------e-EEEEEccCCCcEEEEecCCCeEEEEcCccccCCCc
Q 022074 51 GRELVAGSSDDCIYVYDLEANKLSLRILAHTSD----------V-NTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGK 119 (303)
Q Consensus 51 g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~----------v-~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~ 119 (303)
+..+++++.++.|.-+|..+|+..-+....... + ..+.+. +..++.++.|+.|..+|.+..+...+
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~v~~~dg~l~alD~~tG~~~W~ 142 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALW---GDKVYVGTLDGRLIALDAKTGKAIWS 142 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE---BTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEE---CCEEEEEcCCCEEEEEECCCCCEeee
Confidence 567888888999999999999876554322110 0 112221 34677788899999999753322111
Q ss_pred cceeecccc--cCeEE-EEeCCCCCEEEEEeC------CCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCc---
Q 022074 120 PAGVLMGHL--EGITF-IDSRGDGRYLISNGK------DQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQAR--- 187 (303)
Q Consensus 120 ~~~~~~~h~--~~v~~-~~~~~~~~~l~s~~~------D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 187 (303)
.. ..... ..+.. -.+ .++ .++.+.. ++.|..+|.+..+....... ....+...
T Consensus 143 ~~--~~~~~~~~~~~~~P~v-~~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~-----------~~~~p~~~~~~ 207 (668)
T 1kv9_A 143 QQ--TTDPAKPYSITGAPRV-VKG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT-----------VPGDPALPYEH 207 (668)
T ss_dssp EE--CSCTTSSCBCCSCCEE-ETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEES-----------SCCCTTSCCSS
T ss_pred ec--cCCCCCcceecCCCEE-ECC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc-----------cCCCCCccccc
Confidence 00 00000 00100 000 133 4444432 58899999875443222111 00000000
Q ss_pred -cc--cCCC--CCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCC-------------------eEEEEECCCCe
Q 022074 188 -DL--KHPC--DQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDS-------------------CVYVYDLVSGE 243 (303)
Q Consensus 188 -~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg-------------------~i~iwd~~~~~ 243 (303)
.+ .... ...+....+... .-..+.+.++...++.+..++ .|..+|.++|+
T Consensus 208 ~~~~~~~~~~~g~~~w~~~~gg~------~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~ 281 (668)
T 1kv9_A 208 PELREAAKTWQGDQYWKLGGGGT------VWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGK 281 (668)
T ss_dssp HHHHHHHTTCCSSCHHHHCEECC------CCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCC
T ss_pred cccccccccCCccceeeeCCCCc------cccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCc
Confidence 00 0000 000000000000 001234556566677776665 49999999999
Q ss_pred EEEEeec--CC-------CCeEEEEECCCCC---eEEEEeCCCCEEEeecCCC
Q 022074 244 QVAALKY--HT-------SPVRDCSWHPSQP---MLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 244 ~~~~~~~--h~-------~~I~~v~~sp~~~---~las~s~Dg~i~~Wd~~~~ 284 (303)
.+=.+.. |. .++.......+++ .++.++.+|.+.++|....
T Consensus 282 ~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG 334 (668)
T 1kv9_A 282 LAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNG 334 (668)
T ss_dssp EEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTC
T ss_pred eeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCC
Confidence 8766543 32 2333333334665 7889999999999986543
No 265
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.27 E-value=0.6 Score=41.85 Aligned_cols=113 Identities=10% Similarity=0.071 Sum_probs=68.0
Q ss_pred ceEEEEEcCCCCEEEEeeCC-C----eEEEEECCCCceE-EEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccc
Q 022074 41 GIFSLKFSTDGRELVAGSSD-D----CIYVYDLEANKLS-LRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCL 114 (303)
Q Consensus 41 ~v~~l~~s~~g~~l~sgs~D-g----~v~lwd~~~~~~~-~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~ 114 (303)
....|+|+++|++|+++... + .+..++....... ..+. .......+++.+..+.++++-..++.|..++....
T Consensus 180 ~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~ 258 (430)
T 3tc9_A 180 KVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQ 258 (430)
T ss_dssp CEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTT
T ss_pred CcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCC
Confidence 46789999999977666542 1 3444444332211 1222 22345677786656777777777889999886421
Q ss_pred cCCCccceeec-ccccCeEEEEeCCCCC-EEEEEeCCCcEEEEEcc
Q 022074 115 NVKGKPAGVLM-GHLEGITFIDSRGDGR-YLISNGKDQAIKLWDIR 158 (303)
Q Consensus 115 ~~~~~~~~~~~-~h~~~v~~~~~~~~~~-~l~s~~~D~~v~lWdl~ 158 (303)
....... +....-..++++++++ ++++....+.|..++..
T Consensus 259 ----~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 259 ----ETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp ----EEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ----cEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 1101111 1112356788999999 55666678889998865
No 266
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.21 E-value=0.47 Score=44.30 Aligned_cols=54 Identities=9% Similarity=0.042 Sum_probs=38.2
Q ss_pred CCCeEEEEECCCCeEEEEeecCCCCeEEEEECCCCCeEEEEeCCCCEEEeecCCC
Q 022074 230 HDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 230 ~dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~~ 284 (303)
.+|.++.||..+++.+-.++.. .++........+..++.++.|+.++.||....
T Consensus 442 ~~g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG 495 (571)
T 2ad6_A 442 EMGQIRAFDLTTGKAKWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALDNKDG 495 (571)
T ss_dssp CCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTC
T ss_pred CCCeEEEEECCCCCEEEEecCC-CCccceeEEECCCEEEEEcCCCeEEEEECCCC
Confidence 4689999999999987666432 33333333445667777899999999997643
No 267
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=95.94 E-value=0.67 Score=39.48 Aligned_cols=188 Identities=8% Similarity=-0.018 Sum_probs=99.9
Q ss_pred EEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCccceeecccccCeE
Q 022074 53 ELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGIT 132 (303)
Q Consensus 53 ~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~ 132 (303)
+|+.+.. ..|+..|+.+..... +.........+.|.+..+.++.+-..++.|..++.............+........
T Consensus 3 ~ll~~~~-~~I~~i~~~~~~~~~-~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 80 (316)
T 1ijq_A 3 YLFFTNR-HEVRKMTLDRSEYTS-LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 80 (316)
T ss_dssp EEEEECB-SSEEEEETTSCCCEE-EECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred EEEEECC-CeEEEEECCCcceEe-hhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcC
Confidence 3444443 459999998876543 33444567889997655667777777889999886521000011112222223345
Q ss_pred EEEeCC-CCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEE
Q 022074 133 FIDSRG-DGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIR 211 (303)
Q Consensus 133 ~~~~~~-~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (303)
.+++.+ .++++++-...+.|.+.|+...... .+ .. .+....
T Consensus 81 glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~--------~~------~~-------------------~~~~~P----- 122 (316)
T 1ijq_A 81 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRK--------TL------FR-------------------ENGSKP----- 122 (316)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSSEE--------EE------EE-------------------CTTCCE-----
T ss_pred EEEEeecCCeEEEEECCCCEEEEEeCCCCceE--------EE------EE-------------------CCCCCc-----
Confidence 666765 4455566677788888876421100 00 00 000000
Q ss_pred EeeeeeeeC-CCeEEEEEeCC-CeEEEEECCCCeEEEEe-ecCCCCeEEEEECCCCCe-EEEEeCCCCEEEeecCC
Q 022074 212 CHFSPVYST-GQKYIYTGSHD-SCVYVYDLVSGEQVAAL-KYHTSPVRDCSWHPSQPM-LVSSSWDGDVVRWEFPG 283 (303)
Q Consensus 212 ~~~~~~~s~-~~~~latg~~d-g~i~iwd~~~~~~~~~~-~~h~~~I~~v~~sp~~~~-las~s~Dg~i~~Wd~~~ 283 (303)
....+.| ++.++.+.... +.|...+.. |+....+ ...-...+.++|+|++.. .++-+..+.|...|..+
T Consensus 123 --~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 123 --RAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp --EEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred --ceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCC
Confidence 0112344 34444444333 678888874 3333322 222346789999987654 44444567888888765
No 268
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=95.93 E-value=0.74 Score=39.92 Aligned_cols=194 Identities=8% Similarity=-0.040 Sum_probs=104.3
Q ss_pred eEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCccc
Q 022074 42 IFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPA 121 (303)
Q Consensus 42 v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~ 121 (303)
..|.+..++ .+|+.+. ...|+..++....... +.........++|.+..+.++.+-..++.|..++.... ...
T Consensus 36 ~~C~~~~~~-~~ll~~~-~~~I~~i~~~g~~~~~-~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~----~~~ 108 (349)
T 3v64_C 36 RSCKALGPE-PVLLFAN-RIDIRQVLPHRSEYTL-LLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGS----NVE 108 (349)
T ss_dssp SCEEESSSC-CEEEEEC-BSCEEEECTTSCCEEE-EECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC----SCE
T ss_pred CcccccccC-ceeEeec-ccceEEEeCCCCeeEE-eecCCCceEEEEEeccccEEEEEeccCCceEEEecCCC----Cce
Confidence 345555553 3444443 4458888887665433 33333557889997666666667677888988886421 111
Q ss_pred eeecccccCeEEEEeCC-CCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEE
Q 022074 122 GVLMGHLEGITFIDSRG-DGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATY 200 (303)
Q Consensus 122 ~~~~~h~~~v~~~~~~~-~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (303)
............+++.+ .+.++++-...+.|.+.++...... .. ..
T Consensus 109 ~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~---------~l-------~~----------------- 155 (349)
T 3v64_C 109 EVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK---------VL-------LW----------------- 155 (349)
T ss_dssp EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE---------EE-------EC-----------------
T ss_pred EEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceE---------EE-------Ee-----------------
Confidence 11211223345666665 4555567667788888876421100 00 00
Q ss_pred ecccceeeeEEEeeeeeeeC-CCeEEEEEeCC-CeEEEEECCCCeEEEEe-ecCCCCeEEEEECCCCC-eEEEEeCCCCE
Q 022074 201 KGHSVLRTLIRCHFSPVYST-GQKYIYTGSHD-SCVYVYDLVSGEQVAAL-KYHTSPVRDCSWHPSQP-MLVSSSWDGDV 276 (303)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~s~-~~~~latg~~d-g~i~iwd~~~~~~~~~~-~~h~~~I~~v~~sp~~~-~las~s~Dg~i 276 (303)
.+-... ....+.| ++.++.+-... +.|+..+..... ...+ ...-...+.++|+|++. +.++-...+.|
T Consensus 156 ~~l~~P-------~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I 227 (349)
T 3v64_C 156 QSLEKP-------RAIALHPMEGTIYWTDWGNTPRIEASSMDGSG-RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVI 227 (349)
T ss_dssp TTCSCE-------EEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEESCCSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CCCCCc-------ceEEEecCcCeEEEeccCCCCEEEEEeCCCCC-cEEEEECCCCCcceEEEeCCCCEEEEEECCCCEE
Confidence 000000 0112333 34555555555 788888875322 2222 22234578899998655 44444456678
Q ss_pred EEeecCC
Q 022074 277 VRWEFPG 283 (303)
Q Consensus 277 ~~Wd~~~ 283 (303)
..+++.+
T Consensus 228 ~~~~~dG 234 (349)
T 3v64_C 228 ERANLDG 234 (349)
T ss_dssp EEEETTS
T ss_pred EEEeCCC
Confidence 8888765
No 269
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=95.92 E-value=0.73 Score=39.75 Aligned_cols=202 Identities=9% Similarity=0.001 Sum_probs=108.8
Q ss_pred eEEEEEcCCCCEEEEee-CCCeEEEEECCCCceEEEEecc-----cC--CeEEEEEc--cCCCcEEEEec----------
Q 022074 42 IFSLKFSTDGRELVAGS-SDDCIYVYDLEANKLSLRILAH-----TS--DVNTVCFG--DESGHLIYSGS---------- 101 (303)
Q Consensus 42 v~~l~~s~~g~~l~sgs-~Dg~v~lwd~~~~~~~~~~~~h-----~~--~v~~l~~~--~~~~~~l~s~s---------- 101 (303)
--++.|.+....+..++ ..++|..||...+......... +. .+..+.|. .+.+.++++..
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~ 94 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQ 94 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSC
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccc
Confidence 45678988666677766 7999999999866544332222 11 34678883 23366666433
Q ss_pred ---CCCeEEEEcCccccCCCccce--eeccc-----------ccCeEEEEeCCCCCEEEEEeCC-CcEEEEEcccccCCc
Q 022074 102 ---DDNLCKVWDRRCLNVKGKPAG--VLMGH-----------LEGITFIDSRGDGRYLISNGKD-QAIKLWDIRKMSSNA 164 (303)
Q Consensus 102 ---~dg~v~lWd~~~~~~~~~~~~--~~~~h-----------~~~v~~~~~~~~~~~l~s~~~D-~~v~lWdl~~~~~~~ 164 (303)
.+..|..+|+... .+++... .+... ......++..++|+..++++.- +.|...+......
T Consensus 95 ~~~g~~~v~~~Dl~~~-~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~-- 171 (334)
T 2p9w_A 95 SSHGASSFHSFNLPLS-ENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTV-- 171 (334)
T ss_dssp CSSSCCEEEEEESSCC-TTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCE--
T ss_pred ccCCCCEEEEEcCCcC-CCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEE--
Confidence 2577888997510 0122111 11111 1236778889999999998877 6655554331100
Q ss_pred ccccCccceeeeceeeeCCCCCccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeE
Q 022074 165 SCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQ 244 (303)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~ 244 (303)
..|. +..+.... .. ...-.+++|++..|++....|.+..+|+.+...
T Consensus 172 --------~~~~---~~~~~~~~---------~~-------------G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~ 218 (334)
T 2p9w_A 172 --------STFA---WESGNGGQ---------RP-------------GYSGITFDPHSNKLIAFGGPRALTAFDVSKPYA 218 (334)
T ss_dssp --------EEEE---ECCCCSSS---------CC-------------SCSEEEEETTTTEEEEESSSSSEEEEECSSSSC
T ss_pred --------eeee---ecCCCccc---------cc-------------CcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcc
Confidence 0010 01110000 00 001124678888888776699999999875432
Q ss_pred --EEEee--cC---CCCeEEE-EECCCCCe-EEEEeCCCCEEEee
Q 022074 245 --VAALK--YH---TSPVRDC-SWHPSQPM-LVSSSWDGDVVRWE 280 (303)
Q Consensus 245 --~~~~~--~h---~~~I~~v-~~sp~~~~-las~s~Dg~i~~Wd 280 (303)
+. +. +. -.....+ .--.+|+. |++.+..+.+.+..
T Consensus 219 ~~v~-~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S 262 (334)
T 2p9w_A 219 WPEP-VKINGDFGTLSGTEKIVTVPVGNESVLVGARAPYAISFRS 262 (334)
T ss_dssp CCEE-CEESSCCCCCTTEEEEEEEEETTEEEEEEEETTEEEEEEC
T ss_pred eeec-ccccCCcccccCcccccccccCCEEEEEEcCCCCEEEEEC
Confidence 21 11 21 1123333 22236665 77776666655554
No 270
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=95.91 E-value=0.17 Score=48.91 Aligned_cols=68 Identities=12% Similarity=0.069 Sum_probs=41.4
Q ss_pred eeeeeCCCeEEEEEe---CCCeEEEEECCCCe-EE--EEe-ecCCCCeEEEEECCCCCeEEEEeCC--C--CEEEeecC
Q 022074 215 SPVYSTGQKYIYTGS---HDSCVYVYDLVSGE-QV--AAL-KYHTSPVRDCSWHPSQPMLVSSSWD--G--DVVRWEFP 282 (303)
Q Consensus 215 ~~~~s~~~~~latg~---~dg~i~iwd~~~~~-~~--~~~-~~h~~~I~~v~~sp~~~~las~s~D--g--~i~~Wd~~ 282 (303)
.+.+|+|+++|+... ....|+++|+.+++ .. ..+ .....+..++.|+..+.+++.+..+ + .|..+++.
T Consensus 275 ~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~ 353 (751)
T 2xe4_A 275 FMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRG 353 (751)
T ss_dssp EEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETT
T ss_pred EEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCC
Confidence 355789999887655 34568999998752 12 333 3344566777776655566665554 3 44455543
No 271
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=95.82 E-value=0.55 Score=42.09 Aligned_cols=66 Identities=12% Similarity=0.185 Sum_probs=46.8
Q ss_pred eeC-CCeEEEEEeCCCeEEEEECCCCeEEEEeec-CCCCeEEEEECCCCC-eEEEEeCCCCEEEeecCC
Q 022074 218 YST-GQKYIYTGSHDSCVYVYDLVSGEQVAALKY-HTSPVRDCSWHPSQP-MLVSSSWDGDVVRWEFPG 283 (303)
Q Consensus 218 ~s~-~~~~latg~~dg~i~iwd~~~~~~~~~~~~-h~~~I~~v~~sp~~~-~las~s~Dg~i~~Wd~~~ 283 (303)
+++ ++.++++-..++.|+.+|...++....... .......++|+|+++ ++++-...+.|..++..+
T Consensus 233 vdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 233 THPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp ECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred EeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 456 677777777789999999987664222221 223568999999999 566666778899888654
No 272
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=95.79 E-value=1.2 Score=41.94 Aligned_cols=27 Identities=30% Similarity=0.385 Sum_probs=22.7
Q ss_pred eEEEEEeCCCeEEEEECCCCeEEEEee
Q 022074 223 KYIYTGSHDSCVYVYDLVSGEQVAALK 249 (303)
Q Consensus 223 ~~latg~~dg~i~iwd~~~~~~~~~~~ 249 (303)
+.++.++.+|.+++.|.++|+.+-..+
T Consensus 324 ~~v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 324 KLLTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp EEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEEEEECCCcEEEEEECCCCCEeeccc
Confidence 567888999999999999999876554
No 273
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=95.67 E-value=1 Score=39.61 Aligned_cols=193 Identities=8% Similarity=-0.026 Sum_probs=100.6
Q ss_pred EEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCcccee
Q 022074 44 SLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGV 123 (303)
Q Consensus 44 ~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~ 123 (303)
|.+..+ ..+|+.+. ...|+.+++..+.... +.........++|.+..+.++++-..++.|..++.... .....
T Consensus 81 C~~~~~-~~~l~~~~-~~~I~~i~~~~~~~~~-~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~----~~~~~ 153 (386)
T 3v65_B 81 CKALGP-EPVLLFAN-RIDIRQVLPHRSEYTL-LLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGS----NVEEV 153 (386)
T ss_dssp EEECSS-CCEEEEEC-BSCEEEECTTSCCCEE-EECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC----CEEEE
T ss_pred ECCccc-cceeEeec-CccceeeccCCCcEEE-EecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCC----CcEEE
Confidence 444444 33444443 3568888887765443 33334567889997666667767677888988886421 11111
Q ss_pred ecccccCeEEEEeCC-CCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcceEEec
Q 022074 124 LMGHLEGITFIDSRG-DGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKG 202 (303)
Q Consensus 124 ~~~h~~~v~~~~~~~-~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (303)
+.........+++.+ .+.++++-...+.|.+.++...... . . . ..+
T Consensus 154 ~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~--------~-l-------~-----------------~~~ 200 (386)
T 3v65_B 154 VSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK--------V-L-------L-----------------WQS 200 (386)
T ss_dssp ECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCE--------E-E-------E-----------------CSS
T ss_pred EeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceE--------E-e-------e-----------------cCC
Confidence 211122334555665 3455566666677776665321000 0 0 0 000
Q ss_pred ccceeeeEEEeeeeeeeC-CCeEEEEEeCC-CeEEEEECCCCeEEEEeecCCCCeEEEEECCCCC-eEEEEeCCCCEEEe
Q 022074 203 HSVLRTLIRCHFSPVYST-GQKYIYTGSHD-SCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQP-MLVSSSWDGDVVRW 279 (303)
Q Consensus 203 ~~~~~~~~~~~~~~~~s~-~~~~latg~~d-g~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~-~las~s~Dg~i~~W 279 (303)
-... ....+.| ++.++.+-... +.|+..+.............-...+.++|+|++. +.++-+..+.|..+
T Consensus 201 l~~P-------~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~ 273 (386)
T 3v65_B 201 LEKP-------RAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERA 273 (386)
T ss_dssp CSCE-------EEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEE
T ss_pred CCCC-------cEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEE
Confidence 0000 0112333 34444554444 7788888754332222222334578899997655 44554556678888
Q ss_pred ecCC
Q 022074 280 EFPG 283 (303)
Q Consensus 280 d~~~ 283 (303)
++.+
T Consensus 274 d~dG 277 (386)
T 3v65_B 274 NLDG 277 (386)
T ss_dssp CTTS
T ss_pred eCCC
Confidence 7764
No 274
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=95.58 E-value=1 Score=38.89 Aligned_cols=64 Identities=5% Similarity=0.066 Sum_probs=43.9
Q ss_pred eeCCCeEEEEEeCC-CeEEEEECCCCeEEEEeecC------CCCeEEEEECCCCCeEEEEeCCCCEEEeecC
Q 022074 218 YSTGQKYIYTGSHD-SCVYVYDLVSGEQVAALKYH------TSPVRDCSWHPSQPMLVSSSWDGDVVRWEFP 282 (303)
Q Consensus 218 ~s~~~~~latg~~d-g~i~iwd~~~~~~~~~~~~h------~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~ 282 (303)
..++|..-++++.- +.|...+... +.+..+... ..-.+.++++|+++.|+....+|.|..+|+.
T Consensus 144 vD~~GnaYVt~s~~~~~I~rV~pdG-~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 144 QDRDGNSYVAFALGMPAIARVSADG-KTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp ECTTSCEEEEEEESSCEEEEECTTS-CCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred ECCCCCEEEeCCCCCCeEEEEeCCC-CEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 34567777777777 7777777653 333322111 1236799999999988888779999999976
No 275
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=95.46 E-value=1.4 Score=39.59 Aligned_cols=197 Identities=11% Similarity=0.096 Sum_probs=108.0
Q ss_pred eEEEEEcCC--CCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCC---C-eEEEEcCcccc
Q 022074 42 IFSLKFSTD--GRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDD---N-LCKVWDRRCLN 115 (303)
Q Consensus 42 v~~l~~s~~--g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~d---g-~v~lWd~~~~~ 115 (303)
-..|+++++ +..|+.+...+.|+.+|+.++.... +.........+++.+ +++++++-..+ . .+...+.. ..
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~-~~~~~~~P~giavd~-dG~lyVad~~~~~~~~gv~~~~~~-~~ 217 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDI-KTTNIGQCADVNFTL-NGDMVVVDDQSSDTNTGIYLFTRA-SG 217 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEE-ECCCCSCEEEEEECT-TCCEEEEECCSCTTSEEEEEECGG-GT
T ss_pred CceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEE-eecCCCCccEEEECC-CCCEEEEcCCCCcccceEEEEECC-CC
Confidence 458999984 4556666554889999998876543 444445688999965 46655554321 1 23333321 11
Q ss_pred CCCccceeecccccCeEEEEeCC-CCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCC
Q 022074 116 VKGKPAGVLMGHLEGITFIDSRG-DGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCD 194 (303)
Q Consensus 116 ~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (303)
... ...+. .......+++.+ ++.++++-..++.|+.+|........ .+ .... .
T Consensus 218 ~~~--~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~-----------~~--~~~~----------~ 271 (433)
T 4hw6_A 218 FTE--RLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTE-----------EE--VMMD----------T 271 (433)
T ss_dssp TCC--EEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEE-----------EE--EECS----------C
T ss_pred eec--ccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEE-----------EE--eccC----------C
Confidence 110 01111 122234556777 67766676677888888764211000 00 0000 0
Q ss_pred CcceEEecccceeeeEEEeeeeeeeCCCe-EEEEEeCCCeEEEEECC--CCeE--EEEeecC---------------CCC
Q 022074 195 QSVATYKGHSVLRTLIRCHFSPVYSTGQK-YIYTGSHDSCVYVYDLV--SGEQ--VAALKYH---------------TSP 254 (303)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~latg~~dg~i~iwd~~--~~~~--~~~~~~h---------------~~~ 254 (303)
.. ..+...++++++ +.++-...++|+.++.. ++.. ...+.+. -..
T Consensus 272 --------~~-------~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~ 336 (433)
T 4hw6_A 272 --------KG-------SNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWG 336 (433)
T ss_dssp --------CS-------SCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSS
T ss_pred --------CC-------CcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcC
Confidence 00 001134677787 45555667899998865 3321 1122211 124
Q ss_pred eEEEEE---------CCCCCeEEEEeCCCCEEEeecC
Q 022074 255 VRDCSW---------HPSQPMLVSSSWDGDVVRWEFP 282 (303)
Q Consensus 255 I~~v~~---------sp~~~~las~s~Dg~i~~Wd~~ 282 (303)
...+++ .++++++++-..++.|+.++..
T Consensus 337 P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~~ 373 (433)
T 4hw6_A 337 PNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTPE 373 (433)
T ss_dssp EEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECTT
T ss_pred CccEEEEccccccccCCCCcEEEEECCCCEEEEECCC
Confidence 678999 7788888887778888888753
No 276
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=95.37 E-value=1.2 Score=38.19 Aligned_cols=97 Identities=11% Similarity=0.092 Sum_probs=57.0
Q ss_pred CCCeEEEEECCCCc-eEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEEEeC
Q 022074 59 SDDCIYVYDLEANK-LSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSR 137 (303)
Q Consensus 59 ~Dg~v~lwd~~~~~-~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~ 137 (303)
....|+..+++... ..............+.|.+..+.++.+-..++.|..++..... .....+.........+++.
T Consensus 11 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~---~~~~~~~~~l~~p~glavd 87 (318)
T 3sov_A 11 NRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTE---SVQNVVVSGLLSPDGLACD 87 (318)
T ss_dssp CEEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSS---CCCEEEEECCSCCCEEEEE
T ss_pred ccCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCC---ceEEEEcCCCCCccEEEEE
Confidence 34579999998764 1112222223466888876556677777778889888864221 1111222222334456666
Q ss_pred C-CCCEEEEEeCCCcEEEEEcc
Q 022074 138 G-DGRYLISNGKDQAIKLWDIR 158 (303)
Q Consensus 138 ~-~~~~l~s~~~D~~v~lWdl~ 158 (303)
+ .+.++++-...+.|.++++.
T Consensus 88 ~~~g~ly~~d~~~~~I~~~~~d 109 (318)
T 3sov_A 88 WLGEKLYWTDSETNRIEVSNLD 109 (318)
T ss_dssp TTTTEEEEEETTTTEEEEEETT
T ss_pred cCCCeEEEEECCCCEEEEEECC
Confidence 5 45566676777888888865
No 277
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=95.23 E-value=2.4 Score=41.00 Aligned_cols=195 Identities=11% Similarity=0.100 Sum_probs=109.6
Q ss_pred cceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEec--------ccCCeEEEEEccCCCcEEEEecCCCeEEEEcC
Q 022074 40 FGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILA--------HTSDVNTVCFGDESGHLIYSGSDDNLCKVWDR 111 (303)
Q Consensus 40 ~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~--------h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~ 111 (303)
..|.++...++|+ |-.|+.++-+..||..++........ ....|.+++.. .+++.|..|+.++-+..+|.
T Consensus 357 ~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d-~~g~~lWigt~~~Gl~~~d~ 434 (795)
T 4a2l_A 357 NVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVD-EKKSLVYIGTHAGGLSILHR 434 (795)
T ss_dssp SSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEE-TTTTEEEEEETTTEEEEEET
T ss_pred CeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEc-CCCCEEEEEeCcCceeEEeC
Confidence 4589999888876 55577776699999887764332111 12467888774 34663556777677888986
Q ss_pred ccccCCCccceeec-----ccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCC
Q 022074 112 RCLNVKGKPAGVLM-----GHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQA 186 (303)
Q Consensus 112 ~~~~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (303)
+.. + ...+. .+...|.++...++|.+.+.. . +.+.+||...... . .+....
T Consensus 435 ~~~----~-~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~~----~-------------~~~~~~ 490 (795)
T 4a2l_A 435 NSG----Q-VENFNQRNSQLVNENVYAILPDGEGNLWLGT-L-SALVRFNPEQRSF----T-------------TIEKEK 490 (795)
T ss_dssp TTC----C-EEEECTTTSCCSCSCEEEEEECSSSCEEEEE-S-SCEEEEETTTTEE----E-------------ECCBCT
T ss_pred CCC----c-EEEeecCCCCcCCCeeEEEEECCCCCEEEEe-c-CceeEEeCCCCeE----E-------------Eccccc
Confidence 421 1 11111 123568888887778755544 4 5688888643110 0 000000
Q ss_pred ccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEee-------cCCCCeEEEE
Q 022074 187 RDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALK-------YHTSPVRDCS 259 (303)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~-------~h~~~I~~v~ 259 (303)
.... +.. . .+. .....+++.+.+ |+. +-+..||..+++. .+. .+...|.++.
T Consensus 491 ------~~~~---~~~-~----~i~---~i~~d~~g~lWi-gt~-~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~ 549 (795)
T 4a2l_A 491 ------DGTP---VVS-K----QIT---TLFRDSHKRLWI-GGE-EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIY 549 (795)
T ss_dssp ------TCCB---CCC-C----CEE---EEEECTTCCEEE-EES-SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEE
T ss_pred ------cccc---cCC-c----eEE---EEEECCCCCEEE-EeC-CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEE
Confidence 0000 000 0 000 011234555444 334 4588899877665 322 2345799999
Q ss_pred ECCCCCeEEEEeCCCCEEEeecCC
Q 022074 260 WHPSQPMLVSSSWDGDVVRWEFPG 283 (303)
Q Consensus 260 ~sp~~~~las~s~Dg~i~~Wd~~~ 283 (303)
..++|++.++.. + -|..||...
T Consensus 550 ~d~~g~lWigT~-~-Gl~~~d~~~ 571 (795)
T 4a2l_A 550 EASNGIIWVGTR-E-GFYCFNEKD 571 (795)
T ss_dssp ECTTSCEEEEES-S-CEEEEETTT
T ss_pred ECCCCCEEEEeC-C-CceeECCCC
Confidence 999999666554 3 677888643
No 278
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=95.21 E-value=1.6 Score=40.87 Aligned_cols=54 Identities=20% Similarity=0.230 Sum_probs=37.6
Q ss_pred CCCeEEEEECCCCeEEEEeecCCCCeEEEEECCCCCeEEEEeCCCCEEEeecCCC
Q 022074 230 HDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 230 ~dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~~ 284 (303)
.+|.|+-||+.+|+.+=..+.. .++..-.....+.+++.++.|+.++.||....
T Consensus 464 ~~G~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG 517 (582)
T 1flg_A 464 HVGSLRAMDPVSGKVVWEHKEH-LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSG 517 (582)
T ss_dssp CSEEEEEECTTTCCEEEEEEES-SCCCSCCEEETTTEEEEECTTSEEEEEETTTC
T ss_pred CcceEEEEECCCCCEEEEecCC-CCCcccceEeCCCEEEEECCCCcEEEEECCCC
Confidence 4789999999999987555433 23332222334677888999999999997543
No 279
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=95.01 E-value=1.8 Score=38.32 Aligned_cols=104 Identities=7% Similarity=0.008 Sum_probs=62.0
Q ss_pred EEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCccceeecccccCeE
Q 022074 53 ELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGIT 132 (303)
Q Consensus 53 ~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~ 132 (303)
+|+.+ ....|+..++....... +......+..++|.+..+.++.+-..++.|+.+++.....................
T Consensus 85 ~ll~~-~~~~I~~i~l~~~~~~~-~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 162 (400)
T 3p5b_L 85 YLFFT-NRHEVRKMTLDRSEYTS-LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 162 (400)
T ss_dssp EEEEE-ETTEEEEECTTSCSCEE-EECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEE
T ss_pred eeEEe-ccceeEEEccCCcceeE-eccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcc
Confidence 44444 34679999998765443 34445678899997655666666667888988886421100111222222334456
Q ss_pred EEEeCC-CCCEEEEEeCCCcEEEEEcc
Q 022074 133 FIDSRG-DGRYLISNGKDQAIKLWDIR 158 (303)
Q Consensus 133 ~~~~~~-~~~~l~s~~~D~~v~lWdl~ 158 (303)
.+++.+ .++++++-...+.|.+.|+.
T Consensus 163 glavD~~~~~lY~~d~~~~~I~~~~~~ 189 (400)
T 3p5b_L 163 GLAVDWIHSNIYWTDSVLGTVSVADTK 189 (400)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred cEEEEecCCceEEEECCCCeEEEEeCC
Confidence 677765 45566676677788777764
No 280
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=94.82 E-value=3.2 Score=40.37 Aligned_cols=104 Identities=7% Similarity=-0.005 Sum_probs=60.6
Q ss_pred EEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCccceeecccccCeE
Q 022074 53 ELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGIT 132 (303)
Q Consensus 53 ~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~ 132 (303)
+|+.. ....|+..++...... .+......+..+++....+.++++-...+.|+.+++............+........
T Consensus 397 ~Ll~a-n~~~Ir~i~l~~~~~~-~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~ 474 (791)
T 3m0c_C 397 YLFFT-NRHEVRKMTLDRSEYT-SLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 474 (791)
T ss_dssp EEEEE-CBSSEEEECTTSCCCE-EEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred ccccc-cccceeEeeccCCcce-eeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcc
Confidence 34443 3445888888766543 334445667888886655667777777888888886421111112222222334455
Q ss_pred EEEeCCCC-CEEEEEeCCCcEEEEEcc
Q 022074 133 FIDSRGDG-RYLISNGKDQAIKLWDIR 158 (303)
Q Consensus 133 ~~~~~~~~-~~l~s~~~D~~v~lWdl~ 158 (303)
.+++.+.+ +++++-...+.|.+.++.
T Consensus 475 GLAvD~~~~~LY~tD~~~~~I~v~~ld 501 (791)
T 3m0c_C 475 GLAVDWIHSNIYWTDSVLGTVSVADTK 501 (791)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred eeeeeecCCcEEEEecCCCeEEEEeCC
Confidence 67776555 556677777888888875
No 281
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=94.18 E-value=0.31 Score=46.75 Aligned_cols=196 Identities=9% Similarity=0.008 Sum_probs=96.9
Q ss_pred ceEEEEEcCCCCEEEEee-CCCeEEEEECCC----CceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCcccc
Q 022074 41 GIFSLKFSTDGRELVAGS-SDDCIYVYDLEA----NKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLN 115 (303)
Q Consensus 41 ~v~~l~~s~~g~~l~sgs-~Dg~v~lwd~~~----~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~ 115 (303)
.+.+|+|.+.+..|+... ..+.|+.+++.+ ......+.........+++....++++++-...+.|.+.++..
T Consensus 407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg-- 484 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG-- 484 (699)
T ss_dssp TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSS--
T ss_pred ceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCC--
Confidence 356788998777666654 457899998875 2211111111123455666434456666666678898888642
Q ss_pred CCCccceee-cccccCeEEEEeCCCCCEE-EEEeCC-CcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCC
Q 022074 116 VKGKPAGVL-MGHLEGITFIDSRGDGRYL-ISNGKD-QAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHP 192 (303)
Q Consensus 116 ~~~~~~~~~-~~h~~~v~~~~~~~~~~~l-~s~~~D-~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (303)
.....+ .........+++.+.+..| ++.... +.|...++......
T Consensus 485 ---~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~----------------------------- 532 (699)
T 1n7d_A 485 ---VKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY----------------------------- 532 (699)
T ss_dssp ---CCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCC-----------------------------
T ss_pred ---CceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCee-----------------------------
Confidence 111222 1112234456677654433 333222 44444443210000
Q ss_pred CCCcceEEecccceeeeEEEeeeeeeeCC-CeEEEEEeCCCeEEEEECCCCeEEEEee--cCCCCeEEEEECCCCCeEEE
Q 022074 193 CDQSVATYKGHSVLRTLIRCHFSPVYSTG-QKYIYTGSHDSCVYVYDLVSGEQVAALK--YHTSPVRDCSWHPSQPMLVS 269 (303)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-~~~latg~~dg~i~iwd~~~~~~~~~~~--~h~~~I~~v~~sp~~~~las 269 (303)
.+.... +.......++++ +++.++-...+.|..+|+........+. ........+++..+ .++++
T Consensus 533 ------~l~~~~-----l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywt 600 (699)
T 1n7d_A 533 ------SLVTEN-----IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWT 600 (699)
T ss_dssp ------EESCSS-----CSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEE
T ss_pred ------EEEeCC-----CCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEE
Confidence 000000 000011224443 4555556677889999986433222222 11223455666543 56667
Q ss_pred EeCCCCEEEeecC
Q 022074 270 SSWDGDVVRWEFP 282 (303)
Q Consensus 270 ~s~Dg~i~~Wd~~ 282 (303)
....+.|..++..
T Consensus 601 d~~~~~V~~~d~~ 613 (699)
T 1n7d_A 601 DIINEAIFSANRL 613 (699)
T ss_dssp CSTTTCEEEEETT
T ss_pred eCCCCeEEEEEcc
Confidence 6777888888753
No 282
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=93.90 E-value=0.96 Score=43.34 Aligned_cols=177 Identities=14% Similarity=0.076 Sum_probs=92.3
Q ss_pred EEEEEcCCCCEE-EEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCC-CeEEEEcCccccCCCcc
Q 022074 43 FSLKFSTDGREL-VAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDD-NLCKVWDRRCLNVKGKP 120 (303)
Q Consensus 43 ~~l~~s~~g~~l-~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~d-g~v~lWd~~~~~~~~~~ 120 (303)
..|++.+.+..| ++-...+.|.+++++.......+.........+++.+..+.++++-... +.|...++.. ..
T Consensus 456 ~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG-----~~ 530 (699)
T 1n7d_A 456 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-----VD 530 (699)
T ss_dssp CCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSS-----CC
T ss_pred ceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCC-----CC
Confidence 457777544444 4444567899999876543322222223456777765555555544333 6777766531 11
Q ss_pred ceee-cccccCeEEEEeCCC-CCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcce
Q 022074 121 AGVL-MGHLEGITFIDSRGD-GRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVA 198 (303)
Q Consensus 121 ~~~~-~~h~~~v~~~~~~~~-~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (303)
...+ ......-..++++++ +.++++-+..+.|..+|+...... .+ ... ...+.++.
T Consensus 531 ~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~--------~~------~~~---~~~~~~P~----- 588 (699)
T 1n7d_A 531 IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK--------TI------LED---EKRLAHPF----- 588 (699)
T ss_dssp CCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCE--------EE------CCC---SSSCSSCC-----
T ss_pred eeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceE--------EE------Eec---CCcCCCce-----
Confidence 1111 111223446778875 455666667778888887421100 00 000 00000000
Q ss_pred EEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEECCC
Q 022074 199 TYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPS 263 (303)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~ 263 (303)
...+. .+.++++....+.|..+|..+|+.+..+.......++|++.+.
T Consensus 589 ----------------glavd-~~~lywtd~~~~~V~~~d~~~G~~~~~i~~~~~~P~~i~v~~~ 636 (699)
T 1n7d_A 589 ----------------SLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHQ 636 (699)
T ss_dssp ----------------CCEEE-TTEEEEECSTTTCEEEEETTTEEEEECCCTTCSSCCCCCBCSS
T ss_pred ----------------EeEEE-CCEEEEEeCCCCeEEEEEccCCCceEEeecCCCCCcEEEEeCc
Confidence 00011 2355666677889999998888887776544334566655443
No 283
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=93.77 E-value=2.5 Score=34.97 Aligned_cols=113 Identities=13% Similarity=0.169 Sum_probs=71.7
Q ss_pred CcccceEEEEEcCCCCEEEEeeCCCeEEEEECCC---CceEEEEe-------cccCCeEEEEEccCCCcEEEEecCCCeE
Q 022074 37 GYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEA---NKLSLRIL-------AHTSDVNTVCFGDESGHLIYSGSDDNLC 106 (303)
Q Consensus 37 ~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~---~~~~~~~~-------~h~~~v~~l~~~~~~~~~l~s~s~dg~v 106 (303)
..+.++-.|+|+|+++.|.++.......||..+. ........ .+......+++.|..+++++....+..+
T Consensus 118 ~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L 197 (255)
T 3qqz_A 118 PTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRAL 197 (255)
T ss_dssp CCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEE
T ss_pred cccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeE
Confidence 4567789999999998888877665556665541 11111111 1234678999988888888888889999
Q ss_pred EEEcCccccCCCccceee--c-cc------ccCeEEEEeCCCCCEEEEEeCCCcEEEEEc
Q 022074 107 KVWDRRCLNVKGKPAGVL--M-GH------LEGITFIDSRGDGRYLISNGKDQAIKLWDI 157 (303)
Q Consensus 107 ~lWd~~~~~~~~~~~~~~--~-~h------~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl 157 (303)
..+|.. +++...+ . +. -..-..+++.++|+++++ +.-. ++|-.
T Consensus 198 ~~~d~~-----g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n--~~y~f 249 (255)
T 3qqz_A 198 QEVTLV-----GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPN--RFYRF 249 (255)
T ss_dssp EEECTT-----CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTT--EEEEE
T ss_pred EEEcCC-----CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCc--eEEEE
Confidence 999864 2222221 1 11 123467889999986666 4444 44443
No 284
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=93.73 E-value=5.2 Score=38.51 Aligned_cols=196 Identities=12% Similarity=0.077 Sum_probs=105.2
Q ss_pred cceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEE---ecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccC
Q 022074 40 FGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRI---LAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNV 116 (303)
Q Consensus 40 ~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~---~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~ 116 (303)
..|.++...++|. |-.|+.++-+..||..++...... ......|.+++.. .++.+. .|+.++-+..+|.+..
T Consensus 363 ~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d-~~g~lW-igt~~~Gl~~~~~~~~-- 437 (781)
T 3v9f_A 363 KVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKD-SEGNLW-FGTYLGNISYYNTRLK-- 437 (781)
T ss_dssp SCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEEC-TTSCEE-EEETTEEEEEECSSSC--
T ss_pred cceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEEC-CCCCEE-EEeccCCEEEEcCCCC--
Confidence 4588888888776 555665555889988765432110 1123467788763 345555 4666667888885321
Q ss_pred CCccceeec---ccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCC
Q 022074 117 KGKPAGVLM---GHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPC 193 (303)
Q Consensus 117 ~~~~~~~~~---~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (303)
+ ...+. .....|.++...+++.+. .|.. +.+..+|....... . ........ + .
T Consensus 438 --~-~~~~~~~~~~~~~v~~i~~d~~g~lw-igt~-~Gl~~~~~~~~~~~--------~-------~~~~~~~~-~--~- 493 (781)
T 3v9f_A 438 --K-FQIIELEKNELLDVRVFYEDKNKKIW-IGTH-AGVFVIDLASKKVI--------H-------HYDTSNSQ-L--L- 493 (781)
T ss_dssp --E-EEECCSTTTCCCCEEEEEECTTSEEE-EEET-TEEEEEESSSSSCC--------E-------EECTTTSS-C--S-
T ss_pred --c-EEEeccCCCCCCeEEEEEECCCCCEE-EEEC-CceEEEeCCCCeEE--------e-------cccCcccc-c--c-
Confidence 1 11111 123568888777777644 4444 56888886532110 0 00000000 0 0
Q ss_pred CCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEeec----CCCCeEEEEECCCCCeEEE
Q 022074 194 DQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKY----HTSPVRDCSWHPSQPMLVS 269 (303)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~~----h~~~I~~v~~sp~~~~las 269 (303)
...+ . .....+++.+.+ |+.++-+..+|..+++. ..+.. ....|.++...+++++.++
T Consensus 494 ~~~i-------------~---~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWi~ 555 (781)
T 3v9f_A 494 ENFV-------------R---SIAQDSEGRFWI-GTFGGGVGIYTPDMQLV-RKFNQYEGFCSNTINQIYRSSKGQMWLA 555 (781)
T ss_dssp CSCE-------------E---EEEECTTCCEEE-EESSSCEEEECTTCCEE-EEECTTTTCSCSCEEEEEECTTSCEEEE
T ss_pred ccee-------------E---EEEEcCCCCEEE-EEcCCCEEEEeCCCCeE-EEccCCCCCCCCeeEEEEECCCCCEEEE
Confidence 0000 0 011234555444 45434478899877654 33321 2357899999999987665
Q ss_pred EeCCCCEEEeecCC
Q 022074 270 SSWDGDVVRWEFPG 283 (303)
Q Consensus 270 ~s~Dg~i~~Wd~~~ 283 (303)
.. +|.+..||...
T Consensus 556 T~-~Glv~~~d~~~ 568 (781)
T 3v9f_A 556 TG-EGLVCFPSARN 568 (781)
T ss_dssp ET-TEEEEESCTTT
T ss_pred EC-CCceEEECCCC
Confidence 54 56547787643
No 285
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=93.61 E-value=3 Score=35.50 Aligned_cols=196 Identities=10% Similarity=0.007 Sum_probs=105.8
Q ss_pred ceEEEEEcCCCCEEE-EeeCCCeEEEEECCCCceE-EEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCC
Q 022074 41 GIFSLKFSTDGRELV-AGSSDDCIYVYDLEANKLS-LRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKG 118 (303)
Q Consensus 41 ~v~~l~~s~~g~~l~-sgs~Dg~v~lwd~~~~~~~-~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~ 118 (303)
...+++|.+.++.|+ +-...+.|..+++.++... ..+...-.....+++.+..++++++-...+.|.++++..
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG----- 110 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDG----- 110 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS-----
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCC-----
Confidence 356899998655554 4456778999998776421 122222234567777545566777777788999988642
Q ss_pred ccceee-cccccCeEEEEeCCCCCEEEEEe--CCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCC
Q 022074 119 KPAGVL-MGHLEGITFIDSRGDGRYLISNG--KDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQ 195 (303)
Q Consensus 119 ~~~~~~-~~h~~~v~~~~~~~~~~~l~s~~--~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (303)
.....+ .........+++.+.+..|.-.. ..+.|...++.....
T Consensus 111 ~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~--------------------------------- 157 (318)
T 3sov_A 111 SLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR--------------------------------- 157 (318)
T ss_dssp CSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC---------------------------------
T ss_pred CcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe---------------------------------
Confidence 112222 22334456777776544444333 245566555431100
Q ss_pred cceEEecccceeeeEEEeeeeeeeC-CCeEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEECCCCCeEEEEeCCC
Q 022074 196 SVATYKGHSVLRTLIRCHFSPVYST-GQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDG 274 (303)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~latg~~dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~~las~s~Dg 274 (303)
..+-... +.......+++ ++++..+-...+.|+.+|+........+.........+++. .+.++.+-...+
T Consensus 158 --~~~~~~~-----l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~-~~~lywtd~~~~ 229 (318)
T 3sov_A 158 --FIIINSE-----IYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLF-EDILYWTDWSTH 229 (318)
T ss_dssp --EEEECSS-----CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEE-TTEEEEEETTTT
T ss_pred --EEEEECC-----CCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEe-CCEEEEEecCCC
Confidence 0000000 00011223555 44555555678889999986433222223233456777774 345566666677
Q ss_pred CEEEeecC
Q 022074 275 DVVRWEFP 282 (303)
Q Consensus 275 ~i~~Wd~~ 282 (303)
.|...+..
T Consensus 230 ~V~~~~~~ 237 (318)
T 3sov_A 230 SILACNKY 237 (318)
T ss_dssp EEEEEETT
T ss_pred eEEEEECC
Confidence 78888763
No 286
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=93.15 E-value=3.9 Score=35.35 Aligned_cols=224 Identities=12% Similarity=0.173 Sum_probs=116.8
Q ss_pred EEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCccceee
Q 022074 45 LKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVL 124 (303)
Q Consensus 45 l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~ 124 (303)
.-.+|..+.+|.=. ..++.|||+++........ -...|.-=.|-.+ +.|+-.+ +..|+-|++.. ...|...+
T Consensus 72 AIMnP~~~ViALra-g~~LQiFnletK~klks~~-~~e~VvfWkWis~--~~L~lVT-~taVyHWs~~~---~s~P~kvF 143 (365)
T 2xzh_A 72 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHT-MTDDVTFWKWISL--NTVALVT-DNAVYHWSMEG---ESQPVKMF 143 (365)
T ss_dssp EEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEE-CSSCEEEEEECSS--SEEEEEE-SSEEEEEESST---TCCCEEEE
T ss_pred eeeCCCccEEEEec-CCeEEEechHHhhhhccee-cCCccEEEEecCC--CeEEEEc-CCcEEEEcccC---CCCCceee
Confidence 55788888777755 5789999999987554332 2356776677543 3443333 34899999753 34566666
Q ss_pred ccccc----CeEEEEeCCCCCEEEEEe-------CCCcEEEEEcccccCCcccccCccceeeeceeeeCCCC---Ccccc
Q 022074 125 MGHLE----GITFIDSRGDGRYLISNG-------KDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQ---ARDLK 190 (303)
Q Consensus 125 ~~h~~----~v~~~~~~~~~~~l~s~~-------~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 190 (303)
..|.. .|.....+++.+.++-.| -.|.+.||...+.... .++...-.|. ....+.. ...+.
T Consensus 144 dR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ---~ieGhaa~F~--~~~~~g~~~~~~lf~ 218 (365)
T 2xzh_A 144 DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQ---PIEGHAASFA--QFKMEGNAEESTLFC 218 (365)
T ss_dssp ECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEE---EECCSEEEEE--EECCTTCSSCEEEEE
T ss_pred ecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccc---eeeeeeeeeE--EEecCCCCCCceEEE
Confidence 66543 344555677777665433 1366777776542110 0000000000 0000000 00000
Q ss_pred C----CCCCcce--EEe----cc-cceeeeEEEeeee----------eeeCCCeEEEEEeCCCeEEEEECCCCeEEEEee
Q 022074 191 H----PCDQSVA--TYK----GH-SVLRTLIRCHFSP----------VYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALK 249 (303)
Q Consensus 191 ~----~~~~~~~--~~~----~~-~~~~~~~~~~~~~----------~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~ 249 (303)
. ....++. ... +. .+..+.....+.| ..|.....+..-..-|.|++||++++.++..-.
T Consensus 219 fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nr 298 (365)
T 2xzh_A 219 FAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR 298 (365)
T ss_dssp EEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEec
Confidence 0 0000000 000 00 1111122222222 124445567777788999999999999987766
Q ss_pred cCCCCeEEEEECCCCCeEEEEeCCCCEEEeec
Q 022074 250 YHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEF 281 (303)
Q Consensus 250 ~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~ 281 (303)
-...+|...+-+....-++.....|.+..-.+
T Consensus 299 IS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v 330 (365)
T 2xzh_A 299 ISGETIFVTAPHEATAGIIGVNRKGQVLSVCV 330 (365)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTCEEEEEEE
T ss_pred cCCCceEEecccCCCCcEEEEcCCCEEEEEEE
Confidence 66677777776555444555556666554443
No 287
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=93.05 E-value=5.2 Score=36.53 Aligned_cols=219 Identities=11% Similarity=0.086 Sum_probs=118.2
Q ss_pred ceEEEEE-------cCCCCEEEEeeCCC-------eEEEEECCC-CceE-----EEEecccCCeEEEEEccCCCcEEEEe
Q 022074 41 GIFSLKF-------STDGRELVAGSSDD-------CIYVYDLEA-NKLS-----LRILAHTSDVNTVCFGDESGHLIYSG 100 (303)
Q Consensus 41 ~v~~l~~-------s~~g~~l~sgs~Dg-------~v~lwd~~~-~~~~-----~~~~~h~~~v~~l~~~~~~~~~l~s~ 100 (303)
+...|+| +++|++|++....+ .|.+++... +... ..+.. ......++.++..+.++++-
T Consensus 187 ~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd 265 (496)
T 3kya_A 187 RIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNS 265 (496)
T ss_dssp BEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEE
T ss_pred CCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEE
Confidence 5789999 99999777776654 266666444 2221 12221 23456777876667788888
Q ss_pred cCCCeEEEEcCc-------cccCC--Ccc-----c-eeec-ccccCeEEEEeCCCCCE-EEEEeCCCcEEEEEcccccCC
Q 022074 101 SDDNLCKVWDRR-------CLNVK--GKP-----A-GVLM-GHLEGITFIDSRGDGRY-LISNGKDQAIKLWDIRKMSSN 163 (303)
Q Consensus 101 s~dg~v~lWd~~-------~~~~~--~~~-----~-~~~~-~h~~~v~~~~~~~~~~~-l~s~~~D~~v~lWdl~~~~~~ 163 (303)
..++.|..+|+. ..... ..+ . ..+. +....-..+++++++++ +++-...+.|+.+|.......
T Consensus 266 ~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~ 345 (496)
T 3kya_A 266 YEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKE 345 (496)
T ss_dssp TTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTE
T ss_pred CCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcce
Confidence 889999999975 11110 000 0 1111 11223467899999994 566667788888775421100
Q ss_pred cccccCccceeeeceeeeCCCCCccccCCCCCc--ceEEecccceeeeEEEeeeeeee-------CCCeEEEEEeCCCeE
Q 022074 164 ASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQS--VATYKGHSVLRTLIRCHFSPVYS-------TGQKYIYTGSHDSCV 234 (303)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~s-------~~~~~latg~~dg~i 234 (303)
... ...+.. ...... .. +.. .+.+. ... .. .... .++.+.++-....+|
T Consensus 346 ~~~---~~~~aG-----~~g~~G--~~---DG~~~~a~f~-----~P~-~g---v~vd~~~~~~~~~g~lyVaD~~N~rI 403 (496)
T 3kya_A 346 FIT---PYNFVG-----GYKQSG--YR---DDVGTEARMN-----NPC-QG---VFVKNPDYTGEEEYDFYFVDRLNFCV 403 (496)
T ss_dssp ECC---CEEEEE-----BTTBCC--CB---CCBGGGCBCS-----SEE-EE---EEEECTTCCSSCCEEEEEEEGGGTEE
T ss_pred ecc---cEEecC-----CCCCCc--cc---CCcccccccC-----CCe-EE---EEEccccccccCCCeEEEEECCCCEE
Confidence 000 000000 000000 00 000 00000 000 00 0011 345666777778889
Q ss_pred EEEECCCCeEEEEeecC------------------------CCCeEEEEECCC-CCeEEEEeCCCCEEEeecCCC
Q 022074 235 YVYDLVSGEQVAALKYH------------------------TSPVRDCSWHPS-QPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 235 ~iwd~~~~~~~~~~~~h------------------------~~~I~~v~~sp~-~~~las~s~Dg~i~~Wd~~~~ 284 (303)
+.++ .+|. +.++.+. -.....|+++++ +.++++=..+..|+.+++.+.
T Consensus 404 r~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~ 476 (496)
T 3kya_A 404 RKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQE 476 (496)
T ss_dssp EEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCC
T ss_pred EEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCC
Confidence 9998 4564 3333221 124679999997 888888888899999998754
No 288
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=92.95 E-value=6.9 Score=37.70 Aligned_cols=199 Identities=12% Similarity=0.098 Sum_probs=113.4
Q ss_pred cceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEec-------ccCCeEEEEEccCCCcEEEEecCCCeEEEEcCc
Q 022074 40 FGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILA-------HTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRR 112 (303)
Q Consensus 40 ~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~-------h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~ 112 (303)
..|.++...++|.. ..|+.+| |.+||..++........ ....|.++... .++.+. .|+.++-|..|+..
T Consensus 263 ~~i~~i~~d~~g~l-Wigt~~G-l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D-~~g~lW-igt~~~Gl~~~~~~ 338 (795)
T 4a2l_A 263 NYIRSLAMDSQNRL-WIGTFND-LNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMD-SQGGMW-LGTYFGGLNYYHPI 338 (795)
T ss_dssp SBEEEEEECTTSCE-EEEESSC-EEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEEC-TTSCEE-EEESSSCEEEECGG
T ss_pred CeEEEEEEcCCCCE-EEEeCCh-hheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEe-CCcCEE-EEECCCCeEEeCCC
Confidence 46999999988874 4455565 89999887764432111 12468888773 445554 56666778888753
Q ss_pred cccCCCccceeec-------ccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCC
Q 022074 113 CLNVKGKPAGVLM-------GHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQ 185 (303)
Q Consensus 113 ~~~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (303)
... ...+. -....|.++...++|. |..|..++-|..||...... .. ....+.
T Consensus 339 ~~~-----~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~--------~~-------~~~~~~ 397 (795)
T 4a2l_A 339 RNR-----FKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRF--------TS-------YTLQED 397 (795)
T ss_dssp GGS-----SEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCE--------EE-------ECCC--
T ss_pred ccc-----ceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcE--------EE-------EecCCC
Confidence 211 11111 1234588888877776 55577777899998653110 00 000000
Q ss_pred CccccCCCCCcceEEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEee-----cCCCCeEEEEE
Q 022074 186 ARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALK-----YHTSPVRDCSW 260 (303)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~-----~h~~~I~~v~~ 260 (303)
.... ......+. +.....++.+|-.|..++-|..+|..+++.. .+. .+...|.++..
T Consensus 398 ~~~~-~l~~~~v~----------------~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~-~~~~~~~~l~~~~v~~i~~ 459 (795)
T 4a2l_A 398 ESAR-GIGSNNIK----------------AVYVDEKKSLVYIGTHAGGLSILHRNSGQVE-NFNQRNSQLVNENVYAILP 459 (795)
T ss_dssp -----CCSCSCEE----------------EEEEETTTTEEEEEETTTEEEEEETTTCCEE-EECTTTSCCSCSCEEEEEE
T ss_pred Cccc-CCCCccEE----------------EEEEcCCCCEEEEEeCcCceeEEeCCCCcEE-EeecCCCCcCCCeeEEEEE
Confidence 0000 00000000 1112345663556777777999999887643 332 23457999999
Q ss_pred CCCCCeEEEEeCCCCEEEeecCC
Q 022074 261 HPSQPMLVSSSWDGDVVRWEFPG 283 (303)
Q Consensus 261 sp~~~~las~s~Dg~i~~Wd~~~ 283 (303)
.+++++.+... +-|.+|+...
T Consensus 460 d~~g~lwigt~--~Gl~~~~~~~ 480 (795)
T 4a2l_A 460 DGEGNLWLGTL--SALVRFNPEQ 480 (795)
T ss_dssp CSSSCEEEEES--SCEEEEETTT
T ss_pred CCCCCEEEEec--CceeEEeCCC
Confidence 99998666554 4578888653
No 289
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=92.85 E-value=4.7 Score=35.51 Aligned_cols=196 Identities=9% Similarity=0.010 Sum_probs=104.8
Q ss_pred ceEEEEEcCCCCEEEEe-eCCCeEEEEECCCC----ceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCcccc
Q 022074 41 GIFSLKFSTDGRELVAG-SSDDCIYVYDLEAN----KLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLN 115 (303)
Q Consensus 41 ~v~~l~~s~~g~~l~sg-s~Dg~v~lwd~~~~----~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~ 115 (303)
.+.+|+|++.++.|+.. ...+.|+.+++... .....+.........+++....+++.++-...+.|.+.++...
T Consensus 113 ~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~- 191 (400)
T 3p5b_L 113 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV- 191 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTC-
T ss_pred cceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCC-
Confidence 57899999876666555 45678888888752 2222222233456778885445667777777889988886421
Q ss_pred CCCccceeecccccCeEEEEeCCCCCEE-EEEeC-CCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCC
Q 022074 116 VKGKPAGVLMGHLEGITFIDSRGDGRYL-ISNGK-DQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPC 193 (303)
Q Consensus 116 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~-D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (303)
.....+.........+++.|.+..| .+-.. .+.|...++......
T Consensus 192 ---~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~------------------------------ 238 (400)
T 3p5b_L 192 ---KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY------------------------------ 238 (400)
T ss_dssp ---SEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCE------------------------------
T ss_pred ---ceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccE------------------------------
Confidence 1112222233446677887754444 44322 356666665321000
Q ss_pred CCcceEEecccceeeeEEEeeeeeeeCC-CeEEEEEeCCCeEEEEECCCCeEEEEeec--CCCCeEEEEECCCCCeEEEE
Q 022074 194 DQSVATYKGHSVLRTLIRCHFSPVYSTG-QKYIYTGSHDSCVYVYDLVSGEQVAALKY--HTSPVRDCSWHPSQPMLVSS 270 (303)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~-~~~latg~~dg~i~iwd~~~~~~~~~~~~--h~~~I~~v~~sp~~~~las~ 270 (303)
.+.... +.......++++ +++..+-...+.|..+|+........... .......++. ..+.++.+-
T Consensus 239 -----~~~~~~-----l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v-~~~~lywtd 307 (400)
T 3p5b_L 239 -----SLVTEN-----IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV-FEDKVFWTD 307 (400)
T ss_dssp -----EEECSS-----CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEE-ETTEEEEEE
T ss_pred -----EEEECC-----CCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEE-eCCEEEEec
Confidence 000000 000011224443 44445555678899999864332222222 2234567777 344566677
Q ss_pred eCCCCEEEeec
Q 022074 271 SWDGDVVRWEF 281 (303)
Q Consensus 271 s~Dg~i~~Wd~ 281 (303)
...+.|..++.
T Consensus 308 ~~~~~V~~~~~ 318 (400)
T 3p5b_L 308 IINEAIFSANR 318 (400)
T ss_dssp SSSCSEEEEES
T ss_pred CCCCeEEEEEc
Confidence 77788888873
No 290
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=92.77 E-value=3.8 Score=34.29 Aligned_cols=64 Identities=8% Similarity=0.008 Sum_probs=43.7
Q ss_pred eCCCe-EEEEEeCCCeEEEEECCC-CeE--EEEeecCCCCeEEEEECCCCCeEEEEeCCCCEEEeecCC
Q 022074 219 STGQK-YIYTGSHDSCVYVYDLVS-GEQ--VAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPG 283 (303)
Q Consensus 219 s~~~~-~latg~~dg~i~iwd~~~-~~~--~~~~~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~ 283 (303)
+++++ +.++-...+.|+.+|+.. ++. ...+.. ......++++++|+++++....+.|.+++..+
T Consensus 175 s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~G 242 (306)
T 2p4o_A 175 KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIAPDR 242 (306)
T ss_dssp EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEECTTC
T ss_pred CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEECCCC
Confidence 45555 445556788999999864 321 111211 13467899999999888888889999998654
No 291
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=92.73 E-value=1.2 Score=39.80 Aligned_cols=111 Identities=22% Similarity=0.221 Sum_probs=72.7
Q ss_pred ceEEEEEcCCCCEEEEeeCCCeEEEEECCCCce-----------E-EEEec------ccCCeEEEEEccCC--CcEEEEe
Q 022074 41 GIFSLKFSTDGRELVAGSSDDCIYVYDLEANKL-----------S-LRILA------HTSDVNTVCFGDES--GHLIYSG 100 (303)
Q Consensus 41 ~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~-----------~-~~~~~------h~~~v~~l~~~~~~--~~~l~s~ 100 (303)
.|..+..||+|++||..+.. +|.|.+++.+.. . ..+.- ....|..+.|+|-. +..|++-
T Consensus 67 ~i~qlvlSpsG~lLAl~g~~-~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFNDN-EIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEECSS-EEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEecCC-eEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 36779999999999988655 699999984320 1 11111 23579999998743 4588888
Q ss_pred cCCCeEEEEcCccccCCCccceeec---------ccccCeEEEEeCCCCCEEEEEe--CCCcEEEE
Q 022074 101 SDDNLCKVWDRRCLNVKGKPAGVLM---------GHLEGITFIDSRGDGRYLISNG--KDQAIKLW 155 (303)
Q Consensus 101 s~dg~v~lWd~~~~~~~~~~~~~~~---------~h~~~v~~~~~~~~~~~l~s~~--~D~~v~lW 155 (303)
..|++||+||+... ...|. .+. .....|.+++|..++-.|.... .+|-|.-.
T Consensus 146 tsD~~Ir~yDl~~s--~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 146 KEDDTITMFDILNS--QEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp ETTSCEEEEETTCT--TSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred ecCCEEEEEEcccC--CCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 99999999998631 11222 111 1235677888888765555544 66666653
No 292
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=92.48 E-value=4.4 Score=34.27 Aligned_cols=194 Identities=7% Similarity=-0.005 Sum_probs=103.4
Q ss_pred ceEEEEEcCCCCEEEEe-eCCCeEEEEECCCC---ceEEEEe-cccCCeEEEEEccCCCcEEEEecCCCeEEEEcCcccc
Q 022074 41 GIFSLKFSTDGRELVAG-SSDDCIYVYDLEAN---KLSLRIL-AHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLN 115 (303)
Q Consensus 41 ~v~~l~~s~~g~~l~sg-s~Dg~v~lwd~~~~---~~~~~~~-~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~ 115 (303)
...+++|+++++.|+.. ...+.|..+++.+. .....+. ........+++.+..+++.++-..++.|.+.|...
T Consensus 31 ~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g-- 108 (316)
T 1ijq_A 31 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG-- 108 (316)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS--
T ss_pred ceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCC--
Confidence 36789999876655554 45688999998761 2222222 22234577887544566666767788999988641
Q ss_pred CCCcccee-ecccccCeEEEEeCCCCCEE-EEEeCC-CcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCC
Q 022074 116 VKGKPAGV-LMGHLEGITFIDSRGDGRYL-ISNGKD-QAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHP 192 (303)
Q Consensus 116 ~~~~~~~~-~~~h~~~v~~~~~~~~~~~l-~s~~~D-~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (303)
..... ..........+++.|.+..| ++.... +.|...++.....
T Consensus 109 ---~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~------------------------------ 155 (316)
T 1ijq_A 109 ---VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI------------------------------ 155 (316)
T ss_dssp ---SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE------------------------------
T ss_pred ---CceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCe------------------------------
Confidence 11112 22223456677788755544 443332 5566665431100
Q ss_pred CCCcceEEecccceeeeEEEeeeeeeeCC-CeEEEEEeCCCeEEEEECCCCeEEEEe-ec--CCCCeEEEEECCCCCeEE
Q 022074 193 CDQSVATYKGHSVLRTLIRCHFSPVYSTG-QKYIYTGSHDSCVYVYDLVSGEQVAAL-KY--HTSPVRDCSWHPSQPMLV 268 (303)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-~~~latg~~dg~i~iwd~~~~~~~~~~-~~--h~~~I~~v~~sp~~~~la 268 (303)
..+.... +.......++++ +++.++-...+.|..+|..... ...+ .. .......+++. .+.+++
T Consensus 156 -----~~~~~~~-----~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~-~~~~~~~~~~~~~P~giav~-~~~ly~ 223 (316)
T 1ijq_A 156 -----YSLVTEN-----IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVF-EDKVFW 223 (316)
T ss_dssp -----EEEECSS-----CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEEECTTTTSSEEEEEEE-TTEEEE
T ss_pred -----EEEEECC-----CCCceEEEEeccCCEEEEEECCCCeEEEEecCCCc-eEEEeecCCccCCcEEEEEE-CCEEEE
Confidence 0000000 000011224443 4455555667899999986432 2222 21 22346778884 466677
Q ss_pred EEeCCCCEEEeec
Q 022074 269 SSSWDGDVVRWEF 281 (303)
Q Consensus 269 s~s~Dg~i~~Wd~ 281 (303)
+-...+.|...+.
T Consensus 224 ~d~~~~~V~~~~~ 236 (316)
T 1ijq_A 224 TDIINEAIFSANR 236 (316)
T ss_dssp EETTTTEEEEEET
T ss_pred EECCCCeEEEEeC
Confidence 7767788888875
No 293
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=92.10 E-value=9.2 Score=37.12 Aligned_cols=113 Identities=11% Similarity=0.015 Sum_probs=64.8
Q ss_pred ceEEEEEcCCCCEEEE-eeCCCeEEEEECCCCc----eEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCcccc
Q 022074 41 GIFSLKFSTDGRELVA-GSSDDCIYVYDLEANK----LSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLN 115 (303)
Q Consensus 41 ~v~~l~~s~~g~~l~s-gs~Dg~v~lwd~~~~~----~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~ 115 (303)
.+.+|+|.+.+..|+. -...+.|+.+++.... ....+.........|++....++++++-...+.|.+.++..
T Consensus 425 ~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG-- 502 (791)
T 3m0c_C 425 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG-- 502 (791)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS--
T ss_pred ceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCC--
Confidence 4678999986555554 4456788888887531 12222223345667887545556777777788999888642
Q ss_pred CCCccceee-cccccCeEEEEeCCCCCEE-EEEeCC-CcEEEEEcc
Q 022074 116 VKGKPAGVL-MGHLEGITFIDSRGDGRYL-ISNGKD-QAIKLWDIR 158 (303)
Q Consensus 116 ~~~~~~~~~-~~h~~~v~~~~~~~~~~~l-~s~~~D-~~v~lWdl~ 158 (303)
.....+ .........|++.+....| ++-... +.|...++.
T Consensus 503 ---~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~d 545 (791)
T 3m0c_C 503 ---VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 545 (791)
T ss_dssp ---SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred ---CeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecC
Confidence 222222 2233456788888764444 444232 556666653
No 294
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=91.49 E-value=6.5 Score=34.15 Aligned_cols=65 Identities=17% Similarity=0.202 Sum_probs=41.7
Q ss_pred eeeeeCCCeEEEEE-eCCCeEEEEECCC-CeE--EEEeecCCCCeEEEEECC-CCCeEEEEeCC-CCEEEee
Q 022074 215 SPVYSTGQKYIYTG-SHDSCVYVYDLVS-GEQ--VAALKYHTSPVRDCSWHP-SQPMLVSSSWD-GDVVRWE 280 (303)
Q Consensus 215 ~~~~s~~~~~latg-~~dg~i~iwd~~~-~~~--~~~~~~h~~~I~~v~~sp-~~~~las~s~D-g~i~~Wd 280 (303)
...+|||++.|..+ +..+.|+.|++.. ++. ...+. .....-.++..+ +|++.+++..+ +.+..|+
T Consensus 225 Gia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~-~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~ 295 (355)
T 3sre_A 225 GINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS-FDTLVDNISVDPVTGDLWVGCHPNGMRIFFYD 295 (355)
T ss_dssp EEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE-CSSEEEEEEECTTTCCEEEEEESCHHHHHSCC
T ss_pred cceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe-CCCCCceEEEeCCCCcEEEEecCCceEEEEEC
Confidence 34688999766665 5688999999863 432 22332 235677889999 59887766544 2333344
No 295
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=91.43 E-value=6.6 Score=34.11 Aligned_cols=49 Identities=12% Similarity=0.089 Sum_probs=31.9
Q ss_pred CeEEEEECCCCeEEEEeecCCCCeEEEEECCCCCeE-EEEeCCCCEEEeecCC
Q 022074 232 SCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPML-VSSSWDGDVVRWEFPG 283 (303)
Q Consensus 232 g~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~~l-as~s~Dg~i~~Wd~~~ 283 (303)
|.++.+|.. + +..+...-...+.++||||++.| ++-+..+.|..|++..
T Consensus 203 g~vyr~d~~--~-~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 203 SFVTYYSPN--D-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp EEEEEECTT--C-CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred cEEEEEECC--e-EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 566666653 2 22222223457999999999754 4555678899999863
No 296
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=91.18 E-value=6.8 Score=33.79 Aligned_cols=51 Identities=18% Similarity=0.178 Sum_probs=36.1
Q ss_pred CCeEEEEEeCCCeEEEEECCCCeEEEE--e-ecCCCCeEEEEECCCCCeEEEEe
Q 022074 221 GQKYIYTGSHDSCVYVYDLVSGEQVAA--L-KYHTSPVRDCSWHPSQPMLVSSS 271 (303)
Q Consensus 221 ~~~~latg~~dg~i~iwd~~~~~~~~~--~-~~h~~~I~~v~~sp~~~~las~s 271 (303)
+++++++.-..+.|...+++.++.... + ..-...+.++++.|||.++++..
T Consensus 288 ~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td 341 (353)
T 2g8s_A 288 QQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTD 341 (353)
T ss_dssp TTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEEC
T ss_pred CCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEEe
Confidence 577888777888888888876544322 2 22235799999999999776543
No 297
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=90.53 E-value=7.3 Score=33.04 Aligned_cols=195 Identities=13% Similarity=0.082 Sum_probs=97.7
Q ss_pred cceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEE-ecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCC
Q 022074 40 FGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRI-LAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKG 118 (303)
Q Consensus 40 ~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~-~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~ 118 (303)
..++.+.+.+++..++++ .+|.|.. ..+.++..... ..+...+..+.+.+ ++.+++.+...+..+-+|.. ....
T Consensus 122 ~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~-~~~~~~~g~~G~~~~S~d~g--G~tW 196 (327)
T 2xbg_A 122 GSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSP-SGEYVAVSSRGSFYSTWEPG--QTAW 196 (327)
T ss_dssp SCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECT-TSCEEEEETTSSEEEEECTT--CSSC
T ss_pred CCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEeecCCCcceEEEEEcC-CCcEEEEECCCcEEEEeCCC--CCce
Confidence 457788887766655554 5665422 23335444333 33455788888865 46666666544444445521 1111
Q ss_pred ccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCcce
Q 022074 119 KPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVA 198 (303)
Q Consensus 119 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (303)
.+. .......+..+.+.+++..+ ..+.++.+++.+... ...|... ..+. + +....
T Consensus 197 ~~~--~~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~------------G~tW~~~--~~~~----~--~~~~~-- 251 (327)
T 2xbg_A 197 EPH--NRTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDN------------SENWGEL--LSPL----R--RNSVG-- 251 (327)
T ss_dssp EEE--ECCSSSCEEEEEECTTSCEE-EEETTTEEEEEETTE------------EEEECCC--BCTT----S--SCCSC--
T ss_pred eEC--CCCCCCccceeEECCCCCEE-EEeCCceEEEecCCC------------CCeeEec--cCCc----c--cCCcc--
Confidence 112 12234567778788887655 455677776663210 0011100 0000 0 00000
Q ss_pred EEecccceeeeEEEeeeeeeeCCCeEEEEEeCCCeEEEEECCCCeEEEEee---cCCCCeEEEEECCCCCeEEEEeCCCC
Q 022074 199 TYKGHSVLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALK---YHTSPVRDCSWHPSQPMLVSSSWDGD 275 (303)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~~---~h~~~I~~v~~sp~~~~las~s~Dg~ 275 (303)
. ....+.+++.+++.+ .+|.+ ++..+.|+.=..+. .+...+.++.|.++++ ++.++.+|.
T Consensus 252 ----------~----~~v~~~~~~~~~~~g-~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~ 314 (327)
T 2xbg_A 252 ----------F----LDLAYRTPNEVWLAG-GAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGI 314 (327)
T ss_dssp ----------E----EEEEESSSSCEEEEE-STTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTE
T ss_pred ----------e----EEEEecCCCEEEEEe-CCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCce
Confidence 0 011233455655554 46766 34444454322232 2335688999976554 556667898
Q ss_pred EEEeec
Q 022074 276 VVRWEF 281 (303)
Q Consensus 276 i~~Wd~ 281 (303)
+..++-
T Consensus 315 i~~~~~ 320 (327)
T 2xbg_A 315 LLRYVT 320 (327)
T ss_dssp EEEECC
T ss_pred EEEEcC
Confidence 887775
No 298
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=90.38 E-value=9.8 Score=34.25 Aligned_cols=225 Identities=12% Similarity=0.187 Sum_probs=119.0
Q ss_pred EEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCcccee
Q 022074 44 SLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGV 123 (303)
Q Consensus 44 ~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~ 123 (303)
+.-.+|..+.+|.=. ..++.|||+++........ ....|.-=.|-.+ +.|+-.+ +..|+-|++.. ...|...
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnle~K~klks~~-~~e~VvfWkWis~--~~l~lVT-~taVyHWsi~~---~s~P~kv 141 (494)
T 1bpo_A 70 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHT-MTDDVTFWKWISL--NTVALVT-DNAVYHWSMEG---ESQPVKM 141 (494)
T ss_dssp EEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEE-CSSCCCEEEEEET--TEEEEEC-SSEEEEEESSS---SCCCEEE
T ss_pred eeeeCCCCcEEEEec-CCeEEEEchHHhhhhccee-cCCCceEEEecCC--CeEEEEc-CCeeEEecccC---CCCchhh
Confidence 355788888777654 6789999999987554333 2346666677543 3444333 44899999853 3456666
Q ss_pred eccccc----CeEEEEeCCCCCEEEEEe-------CCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCC---ccc
Q 022074 124 LMGHLE----GITFIDSRGDGRYLISNG-------KDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQA---RDL 189 (303)
Q Consensus 124 ~~~h~~----~v~~~~~~~~~~~l~s~~-------~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 189 (303)
+..|.. .|.....+++.+.++-.| -.|.+.+|...+.... .+....-.|. ....+... ..+
T Consensus 142 FdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ---~ieGhaa~F~--~~~~~g~~~~~~lf 216 (494)
T 1bpo_A 142 FDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQ---PIEGHAASFA--QFKMEGNAEESTLF 216 (494)
T ss_dssp EECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEE---EECCSEEEEE--EEECTTCSSEEEEE
T ss_pred eecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccc---hheeeeeeeE--EEecCCCCCCceEE
Confidence 666543 355555677777765333 2467777876542210 0000000000 00000000 000
Q ss_pred ----cCCCCCcceEEe------c-ccceeeeEEEeeee----------eeeCCCeEEEEEeCCCeEEEEECCCCeEEEEe
Q 022074 190 ----KHPCDQSVATYK------G-HSVLRTLIRCHFSP----------VYSTGQKYIYTGSHDSCVYVYDLVSGEQVAAL 248 (303)
Q Consensus 190 ----~~~~~~~~~~~~------~-~~~~~~~~~~~~~~----------~~s~~~~~latg~~dg~i~iwd~~~~~~~~~~ 248 (303)
+.....++.... + ..+..+.....+.| ..|+....+..-..-|.|++||+.++..+..-
T Consensus 217 ~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~n 296 (494)
T 1bpo_A 217 CFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMN 296 (494)
T ss_dssp EEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred EEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeee
Confidence 000000000000 0 01111222222222 13444556777788999999999999998776
Q ss_pred ecCCCCeEEEEECCCCCeEEEEeCCCCEEEeec
Q 022074 249 KYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEF 281 (303)
Q Consensus 249 ~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~ 281 (303)
.-...+|...+-+....-++.....|.+.--.+
T Consensus 297 rIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v 329 (494)
T 1bpo_A 297 RISGETIFVTAPHEATAGIIGVNRKGQVLSVCV 329 (494)
T ss_dssp ECCSSCEEEEEEETTTTEEEEEETTCEEEEEEE
T ss_pred cccCCceEEecccCCCCcEEEEccCceEEEEEE
Confidence 666677777776665555555556666554443
No 299
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=90.30 E-value=13 Score=35.62 Aligned_cols=111 Identities=15% Similarity=0.124 Sum_probs=64.8
Q ss_pred cceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEe--------------cccCCeEEEEEccCCCcEEEEecCCCe
Q 022074 40 FGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRIL--------------AHTSDVNTVCFGDESGHLIYSGSDDNL 105 (303)
Q Consensus 40 ~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~--------------~h~~~v~~l~~~~~~~~~l~s~s~dg~ 105 (303)
..|.++...++|. +..|+..+-|.++|..++....... -....|.++... .++.+. .|+.++-
T Consensus 258 ~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D-~~g~lW-igt~~~G 334 (781)
T 3v9f_A 258 SYIFSIKQLKDNK-LWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQD-SFNNIW-IGTWGGG 334 (781)
T ss_dssp CCEEEEEECTTSE-EEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEEC-SSCCEE-EEEBSSC
T ss_pred ceEEEEEECCCCC-EEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEe-CCCCEE-EEecCCe
Confidence 4588888887776 5556663448899988765432111 123467788763 445544 5666667
Q ss_pred EEEEcCccccCCCccceeec----------ccccCeEEEEeCCCCCEEEEEeCCCcEEEEEccc
Q 022074 106 CKVWDRRCLNVKGKPAGVLM----------GHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRK 159 (303)
Q Consensus 106 v~lWd~~~~~~~~~~~~~~~----------~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~~ 159 (303)
|..++..... ...+. .....|.++...++|. |..|+.++-+..||...
T Consensus 335 l~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~ 392 (781)
T 3v9f_A 335 INFISNAPPT-----FHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFENGK 392 (781)
T ss_dssp EEEECSSCCS-----CEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEETTE
T ss_pred EEEeCCCCCc-----ceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEECCC
Confidence 8888754211 11110 1234588887777776 55666667788888653
No 300
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=89.99 E-value=18 Score=36.74 Aligned_cols=109 Identities=16% Similarity=0.233 Sum_probs=61.2
Q ss_pred eEEEEEcCC-CCEEEEee----------CCCeEEEEECCCCceEEEE-ecccCCeEEEEEccCCCcEEEEecCCCeEEEE
Q 022074 42 IFSLKFSTD-GRELVAGS----------SDDCIYVYDLEANKLSLRI-LAHTSDVNTVCFGDESGHLIYSGSDDNLCKVW 109 (303)
Q Consensus 42 v~~l~~s~~-g~~l~sgs----------~Dg~v~lwd~~~~~~~~~~-~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lW 109 (303)
+..+.|..+ ..++++|+ ..|.|.+|++..+++.... ...++.|.+++-- ++.++++. ..+|++|
T Consensus 834 v~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~--~g~Lla~i--g~~l~vy 909 (1158)
T 3ei3_A 834 LVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEF--NGKLLASI--NSTVRLY 909 (1158)
T ss_dssp EEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSCEEEEEEE--TTEEEEEE--TTEEEEE
T ss_pred EEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCcCEEEeee--CCEEEEEc--CCEEEEE
Confidence 444445433 46888887 3578999998755443221 2345788888743 35444433 3689999
Q ss_pred cCccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCCcEEEEEcc
Q 022074 110 DRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIR 158 (303)
Q Consensus 110 d~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~ 158 (303)
++... +.......+-..+..+.....+++++.|...+++.+...+
T Consensus 910 ~l~~~----~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~ 954 (1158)
T 3ei3_A 910 EWTTE----KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYK 954 (1158)
T ss_dssp EECTT----SCEEEEEEECCCSCEEEEEEETTEEEEEESSBCEEEEEEE
T ss_pred ECCCC----ceEEEEeeccccEEEEEEeccCCEEEEEEhhheEEEEEEE
Confidence 97521 1111111111223322232346788888888888776543
No 301
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=89.58 E-value=8.8 Score=32.53 Aligned_cols=112 Identities=11% Similarity=-0.046 Sum_probs=60.2
Q ss_pred CCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEE-ecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccc
Q 022074 36 GGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRI-LAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCL 114 (303)
Q Consensus 36 ~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~-~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~ 114 (303)
.++...+.++.+.+++..++++. +|.+..-+-..+.....+ ......+..+.+.+ +++++ .++.+|.+++++....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~g~-~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~-~g~~~-~~~~~G~~~~s~~D~G 235 (327)
T 2xbg_A 159 QEAIGVMRNLNRSPSGEYVAVSS-RGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTP-DGRLW-MIVNGGKIAFSDPDNS 235 (327)
T ss_dssp CSCCCCEEEEEECTTSCEEEEET-TSSEEEEECTTCSSCEEEECCSSSCEEEEEECT-TSCEE-EEETTTEEEEEETTEE
T ss_pred cCCCcceEEEEEcCCCcEEEEEC-CCcEEEEeCCCCCceeECCCCCCCccceeEECC-CCCEE-EEeCCceEEEecCCCC
Confidence 45566789999999988777664 454433322213322222 23445678888854 35555 4556788887731100
Q ss_pred cCCCccceee-cccccCeEEEEeCCCCCEEEEEeCCCcE
Q 022074 115 NVKGKPAGVL-MGHLEGITFIDSRGDGRYLISNGKDQAI 152 (303)
Q Consensus 115 ~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~~~D~~v 152 (303)
.+....... ..+...+..+.+.+++..++.+ .++.+
T Consensus 236 -~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g-~~g~i 272 (327)
T 2xbg_A 236 -ENWGELLSPLRRNSVGFLDLAYRTPNEVWLAG-GAGAL 272 (327)
T ss_dssp -EEECCCBCTTSSCCSCEEEEEESSSSCEEEEE-STTCE
T ss_pred -CeeEeccCCcccCCcceEEEEecCCCEEEEEe-CCCeE
Confidence 011111110 0122357778787777665555 45655
No 302
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=89.57 E-value=14 Score=34.78 Aligned_cols=193 Identities=8% Similarity=-0.005 Sum_probs=104.6
Q ss_pred ceEEEEEcCCCCEEEEe-eCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCc
Q 022074 41 GIFSLKFSTDGRELVAG-SSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGK 119 (303)
Q Consensus 41 ~v~~l~~s~~g~~l~sg-s~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~ 119 (303)
...+|+|++.++.|+.. ..++.|+.++++.......+.........+++....+++..+-...+.|.+.++.. .
T Consensus 38 ~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG-----~ 112 (628)
T 4a0p_A 38 EASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDG-----Q 112 (628)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS-----T
T ss_pred ceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCC-----C
Confidence 47899999876666654 45788999998765443333222234667777544566777777788888888642 1
Q ss_pred cceee-cccccCeEEEEeCCCCCEE-EEE-eCCCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCc
Q 022074 120 PAGVL-MGHLEGITFIDSRGDGRYL-ISN-GKDQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQS 196 (303)
Q Consensus 120 ~~~~~-~~h~~~v~~~~~~~~~~~l-~s~-~~D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (303)
....+ ......-..+++.|....| .|- +....|...++...... .
T Consensus 113 ~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~--------------------------------~ 160 (628)
T 4a0p_A 113 HRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERT--------------------------------T 160 (628)
T ss_dssp TCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE--------------------------------E
T ss_pred cEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceE--------------------------------E
Confidence 12222 2233456778888744444 443 22344544544311000 0
Q ss_pred ceEEecccceeeeEEEeeeeeeeCC-CeEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEECCCCCeEEEEeCCCC
Q 022074 197 VATYKGHSVLRTLIRCHFSPVYSTG-QKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGD 275 (303)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~s~~-~~~latg~~dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~~las~s~Dg~ 275 (303)
+ ..+ +.......+.++ +++..+-...+.|...|+..... ..+.........+++.. +.+++|-...+.
T Consensus 161 l--~~~-------~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~ 229 (628)
T 4a0p_A 161 L--VPN-------VGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRS 229 (628)
T ss_dssp E--ECS-------CSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET-TEEEEEETTTTE
T ss_pred E--ECC-------CCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC-CEEEEecCCCCE
Confidence 0 000 000011123443 44455555677888888864332 23333333456777755 455556555777
Q ss_pred EEEeec
Q 022074 276 VVRWEF 281 (303)
Q Consensus 276 i~~Wd~ 281 (303)
|...|.
T Consensus 230 I~~~dk 235 (628)
T 4a0p_A 230 IERANK 235 (628)
T ss_dssp EEEEET
T ss_pred EEEEEC
Confidence 777774
No 303
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=88.81 E-value=9.2 Score=31.72 Aligned_cols=61 Identities=16% Similarity=0.300 Sum_probs=34.4
Q ss_pred CCeEEEEEeCC-----CeEEEEECCCCeE--EEEeecCCCCeEEEEECCCCCeEEEEeCC-----CCEEEeecCC
Q 022074 221 GQKYIYTGSHD-----SCVYVYDLVSGEQ--VAALKYHTSPVRDCSWHPSQPMLVSSSWD-----GDVVRWEFPG 283 (303)
Q Consensus 221 ~~~~latg~~d-----g~i~iwd~~~~~~--~~~~~~h~~~I~~v~~sp~~~~las~s~D-----g~i~~Wd~~~ 283 (303)
++++++.||.+ ..+.+||+.+.+= +..+.........+.+ ++.+++.|+.+ ..+.++|+..
T Consensus 200 ~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~ 272 (306)
T 3ii7_A 200 KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTET 272 (306)
T ss_dssp TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTT
T ss_pred CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCC
Confidence 45666666643 4689999987642 2222211122233333 67788888754 4567777654
No 304
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=87.47 E-value=13 Score=32.05 Aligned_cols=106 Identities=14% Similarity=0.073 Sum_probs=59.2
Q ss_pred eEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEE--E----ecccCCeEEEEEccC---CCcEEEEe--cCCCeEEEEc
Q 022074 42 IFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLR--I----LAHTSDVNTVCFGDE---SGHLIYSG--SDDNLCKVWD 110 (303)
Q Consensus 42 v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~--~----~~h~~~v~~l~~~~~---~~~~l~s~--s~dg~v~lWd 110 (303)
-..|+|.|||+.+++--..|.|++++..+++.... + .........++++|+ ++.+.++= ..+..|.-|.
T Consensus 34 P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~ 113 (347)
T 3das_A 34 PWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRML 113 (347)
T ss_dssp EEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEE
T ss_pred ceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEEE
Confidence 57899999998766655589999998766553211 1 112356788999764 34454432 2344454454
Q ss_pred Ccccc----CCCccceeec----ccccCeEEEEeCCCCCEEEEEe
Q 022074 111 RRCLN----VKGKPAGVLM----GHLEGITFIDSRGDGRYLISNG 147 (303)
Q Consensus 111 ~~~~~----~~~~~~~~~~----~h~~~v~~~~~~~~~~~l~s~~ 147 (303)
..... ........+. +....-..+.|.++|.++++.+
T Consensus 114 ~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 114 YDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp BCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred eCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 43210 0001111111 1111234577899998888765
No 305
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=87.33 E-value=11 Score=31.04 Aligned_cols=61 Identities=13% Similarity=0.177 Sum_probs=34.5
Q ss_pred CCeEEEEEeCC-----CeEEEEECCCCeEEE--EeecCCCCeEEEEECCCCCeEEEEeCCC-----CEEEeecCC
Q 022074 221 GQKYIYTGSHD-----SCVYVYDLVSGEQVA--ALKYHTSPVRDCSWHPSQPMLVSSSWDG-----DVVRWEFPG 283 (303)
Q Consensus 221 ~~~~latg~~d-----g~i~iwd~~~~~~~~--~~~~h~~~I~~v~~sp~~~~las~s~Dg-----~i~~Wd~~~ 283 (303)
++++++.||.+ ..+.+||+.+.+-.. .+.........+. -++++++.|+.++ .+.++|+..
T Consensus 206 ~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~ 278 (301)
T 2vpj_A 206 NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATV--LRGRLYAIAGYDGNSLLSSIECYDPII 278 (301)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBEEEEEEEETTT
T ss_pred CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEE--ECCEEEEEcCcCCCcccccEEEEcCCC
Confidence 46677777754 568999998765322 1211111122222 3677777777653 456777654
No 306
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=87.24 E-value=11 Score=31.04 Aligned_cols=62 Identities=23% Similarity=0.287 Sum_probs=35.4
Q ss_pred CCeEEEEEeCC-----CeEEEEECCCCeE--EEEeecCCCCeEEEEECCCCCeEEEEeCCC-----CEEEeecCCC
Q 022074 221 GQKYIYTGSHD-----SCVYVYDLVSGEQ--VAALKYHTSPVRDCSWHPSQPMLVSSSWDG-----DVVRWEFPGN 284 (303)
Q Consensus 221 ~~~~latg~~d-----g~i~iwd~~~~~~--~~~~~~h~~~I~~v~~sp~~~~las~s~Dg-----~i~~Wd~~~~ 284 (303)
++++++.||.+ ..+.+||+.+.+- +..+......-..+. .++++++.|+.++ .+.++|+...
T Consensus 204 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 204 NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCA--VNGLLYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEE--ECCEEEEECCcCCCcccccEEEEcCCCC
Confidence 46777777754 4699999987643 221211111112222 3677788887664 4788886543
No 307
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=87.14 E-value=9.7 Score=34.20 Aligned_cols=107 Identities=11% Similarity=0.118 Sum_probs=58.1
Q ss_pred eEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEE--EEec------ccCCeEEEEEccC---CCcEEEEecC--------
Q 022074 42 IFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSL--RILA------HTSDVNTVCFGDE---SGHLIYSGSD-------- 102 (303)
Q Consensus 42 v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~--~~~~------h~~~v~~l~~~~~---~~~~l~s~s~-------- 102 (303)
-.+|+|.|+|+.+++-...+.|++++..++.... .+.. ...+...++++|+ ++.+.++-+.
T Consensus 29 P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~ 108 (454)
T 1cru_A 29 PHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDK 108 (454)
T ss_dssp EEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--C
T ss_pred ceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCcc
Confidence 4689999999866654433478888776554322 1111 1346678999764 4555555432
Q ss_pred ----CCeEEEEcCccccCC-Cccceeec----ccccCeEEEEeCCCCCEEEEEeC
Q 022074 103 ----DNLCKVWDRRCLNVK-GKPAGVLM----GHLEGITFIDSRGDGRYLISNGK 148 (303)
Q Consensus 103 ----dg~v~lWd~~~~~~~-~~~~~~~~----~h~~~v~~~~~~~~~~~l~s~~~ 148 (303)
...|.-++....... ......+. +.......+.|.++|.++++.+.
T Consensus 109 ~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 109 ELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp CSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred ccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 123444443211000 01111111 11123577889999998887654
No 308
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=86.96 E-value=14 Score=31.79 Aligned_cols=52 Identities=15% Similarity=0.109 Sum_probs=35.9
Q ss_pred CCCeEEEEEeCCCeEEEEECCCC-eEE--EEe-ecCCCCeEEEEECCCCCeEEEEe
Q 022074 220 TGQKYIYTGSHDSCVYVYDLVSG-EQV--AAL-KYHTSPVRDCSWHPSQPMLVSSS 271 (303)
Q Consensus 220 ~~~~~latg~~dg~i~iwd~~~~-~~~--~~~-~~h~~~I~~v~~sp~~~~las~s 271 (303)
.++.++++.-..+.|...++... +.. ..+ ..-...+.++++.|||.++++..
T Consensus 275 ~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 275 LRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp GTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred cCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 46777777777888988888743 221 222 22245789999999998777764
No 309
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=86.56 E-value=15 Score=31.58 Aligned_cols=103 Identities=14% Similarity=0.078 Sum_probs=56.5
Q ss_pred eEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEE--EEe---cccCCeEEEEEccC---CCcEEEEecCC-----CeEEE
Q 022074 42 IFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSL--RIL---AHTSDVNTVCFGDE---SGHLIYSGSDD-----NLCKV 108 (303)
Q Consensus 42 v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~--~~~---~h~~~v~~l~~~~~---~~~~l~s~s~d-----g~v~l 108 (303)
-..++|.|+|+ ++++..+|.|++++ ++.... .+. ........++++++ ++.+.++-..+ ..|..
T Consensus 33 P~~ia~~pdG~-l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r 109 (352)
T 2ism_A 33 PWALAFLPDGG-MLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVR 109 (352)
T ss_dssp EEEEEECTTSC-EEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEE
T ss_pred ceEEEEcCCCe-EEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEE
Confidence 46899999998 45556779999998 443211 111 11346788999765 35555544432 56666
Q ss_pred EcCccccCCC-cc-ceeec---ccccCeEEEEeCCCCCEEEEEe
Q 022074 109 WDRRCLNVKG-KP-AGVLM---GHLEGITFIDSRGDGRYLISNG 147 (303)
Q Consensus 109 Wd~~~~~~~~-~~-~~~~~---~h~~~v~~~~~~~~~~~l~s~~ 147 (303)
++........ +. ...+. +.......+.+.++|.+.++.+
T Consensus 110 ~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 110 LRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 6643110000 00 11111 1111234678899998777754
No 310
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=84.89 E-value=26 Score=32.86 Aligned_cols=195 Identities=10% Similarity=0.007 Sum_probs=98.0
Q ss_pred eEEEEEcCCCCEEEEee-CCCeEEEEECCCCceEEEEec-ccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCc
Q 022074 42 IFSLKFSTDGRELVAGS-SDDCIYVYDLEANKLSLRILA-HTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGK 119 (303)
Q Consensus 42 v~~l~~s~~g~~l~sgs-~Dg~v~lwd~~~~~~~~~~~~-h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~ 119 (303)
..+++|++.++.|+... ..+.|..++++.......+.. .......+++....++++++-..++.|.+.++.. .
T Consensus 42 ~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG-----~ 116 (619)
T 3s94_A 42 AAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDG-----S 116 (619)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-----C
T ss_pred eEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCC-----C
Confidence 67899998777766654 467788888876532222222 2246788888655566777777888999988642 2
Q ss_pred cceeec-ccccCeEEEEeCCCCCEE-EEEeC-CCcEEEEEcccccCCcccccCccceeeeceeeeCCCCCccccCCCCCc
Q 022074 120 PAGVLM-GHLEGITFIDSRGDGRYL-ISNGK-DQAIKLWDIRKMSSNASCNLGFRSYEWDYRWMDYPPQARDLKHPCDQS 196 (303)
Q Consensus 120 ~~~~~~-~h~~~v~~~~~~~~~~~l-~s~~~-D~~v~lWdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (303)
....+. .....-..+++.|.+.+| .|--. ...|...++.....
T Consensus 117 ~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~---------------------------------- 162 (619)
T 3s94_A 117 LRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR---------------------------------- 162 (619)
T ss_dssp SCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSC----------------------------------
T ss_pred CEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCce----------------------------------
Confidence 222222 233345566777654444 44311 23333333321000
Q ss_pred ceEEecccceeeeEEEeeeeeeeC-CCeEEEEEeCCCeEEEEECCCCeEEEEeecCCCCeEEEEECCCCCeEEEEeCCCC
Q 022074 197 VATYKGHSVLRTLIRCHFSPVYST-GQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGD 275 (303)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~s~-~~~~latg~~dg~i~iwd~~~~~~~~~~~~h~~~I~~v~~sp~~~~las~s~Dg~ 275 (303)
..+.... +.......+.+ ++++..+-...+.|...|+..........+.......+++..+ .++.|-...+.
T Consensus 163 -~~l~~~~-----~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~ 235 (619)
T 3s94_A 163 -FIIINSE-----IYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHS 235 (619)
T ss_dssp -EEEECSS-----CSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS-EEEEECTTTCS
T ss_pred -EEEEeCC-----CCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCE
Confidence 0000000 00000112333 3455555556778888888644332222212223356777665 55666666777
Q ss_pred EEEeecC
Q 022074 276 VVRWEFP 282 (303)
Q Consensus 276 i~~Wd~~ 282 (303)
|...|..
T Consensus 236 V~~~d~~ 242 (619)
T 3s94_A 236 ILACNKY 242 (619)
T ss_dssp EEEEESS
T ss_pred EEEEECC
Confidence 8877754
No 311
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=84.60 E-value=16 Score=30.31 Aligned_cols=61 Identities=20% Similarity=0.199 Sum_probs=33.8
Q ss_pred CCeEEEEEeCC-----CeEEEEECCCCeEE--EEeecCCCCeEEEEECCCCCeEEEEeCCC-----CEEEeecCC
Q 022074 221 GQKYIYTGSHD-----SCVYVYDLVSGEQV--AALKYHTSPVRDCSWHPSQPMLVSSSWDG-----DVVRWEFPG 283 (303)
Q Consensus 221 ~~~~latg~~d-----g~i~iwd~~~~~~~--~~~~~h~~~I~~v~~sp~~~~las~s~Dg-----~i~~Wd~~~ 283 (303)
++++++.||.+ ..+.+||+.+.+=. ..+.........+. -++++++.|+.++ .+.++|+..
T Consensus 215 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~ 287 (308)
T 1zgk_A 215 HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITV--HQGRIYVLGGYDGHTFLDSVECYDPDT 287 (308)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTT
T ss_pred CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEE--ECCEEEEEcCcCCCcccceEEEEcCCC
Confidence 46677777654 56999999876432 11111111112222 2667777777543 456777654
No 312
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=84.35 E-value=24 Score=36.79 Aligned_cols=107 Identities=13% Similarity=0.209 Sum_probs=64.1
Q ss_pred EEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCccceee
Q 022074 45 LKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVL 124 (303)
Q Consensus 45 l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~ 124 (303)
.-.+|..+.++.=. ..++.|||+.+....... .-...|.-=.|-.+ +.++-.+ +..|..|++.. ...|...+
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnl~~k~klks~-~~~e~VvfWkWis~--~~l~lVT-~~aVyHW~~~~---~s~P~k~f 142 (1630)
T 1xi4_A 71 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAH-TMTDDVTFWKWISL--NTVALVT-DNAVYHWSMEG---ESQPVKMF 142 (1630)
T ss_pred hccCCCcceEEEec-CCeEEEeehHHhhhhccc-ccCCCceEEEecCC--CeeEEEc-CCeEEEeccCC---CCccHHHH
Confidence 45778777766654 678999999887644322 22345666667443 3343333 34899999853 33455555
Q ss_pred cccc----cCeEEEEeCCCCCEEEEEe-------CCCcEEEEEccc
Q 022074 125 MGHL----EGITFIDSRGDGRYLISNG-------KDQAIKLWDIRK 159 (303)
Q Consensus 125 ~~h~----~~v~~~~~~~~~~~l~s~~-------~D~~v~lWdl~~ 159 (303)
..|. ..|..-..+++.+.++-.| -.|.+.+|...+
T Consensus 143 dR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er 188 (1630)
T 1xi4_A 143 DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR 188 (1630)
T ss_pred hcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccc
Confidence 5553 3344445566666665322 357888887664
No 313
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=84.17 E-value=16 Score=30.01 Aligned_cols=62 Identities=16% Similarity=0.196 Sum_probs=34.3
Q ss_pred CCeEEEEEeCC-----CeEEEEECCCCeEEE--EeecCCCCeEEEEECCCCCeEEEEeCC-----CCEEEeecCCC
Q 022074 221 GQKYIYTGSHD-----SCVYVYDLVSGEQVA--ALKYHTSPVRDCSWHPSQPMLVSSSWD-----GDVVRWEFPGN 284 (303)
Q Consensus 221 ~~~~latg~~d-----g~i~iwd~~~~~~~~--~~~~h~~~I~~v~~sp~~~~las~s~D-----g~i~~Wd~~~~ 284 (303)
++++++.||.+ ..+.+||+.+.+-.. .+......-..+.+ ++.+++.|+.+ ..+.++|+...
T Consensus 159 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~ 232 (301)
T 2vpj_A 159 SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTD 232 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCC
Confidence 45666777654 458899988764322 11111111122222 56777777764 45777886543
No 314
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=84.13 E-value=11 Score=33.72 Aligned_cols=69 Identities=17% Similarity=0.268 Sum_probs=49.5
Q ss_pred eeCCCeEEEEEeCCCeEEEEECCCCe------------EEEEeec------CCCCeEEEEECCCC---CeEEEEeCCCCE
Q 022074 218 YSTGQKYIYTGSHDSCVYVYDLVSGE------------QVAALKY------HTSPVRDCSWHPSQ---PMLVSSSWDGDV 276 (303)
Q Consensus 218 ~s~~~~~latg~~dg~i~iwd~~~~~------------~~~~~~~------h~~~I~~v~~sp~~---~~las~s~Dg~i 276 (303)
.+|+|++||..+ +..|.|..+..+. ..+.+.. ...+|..+-|||-+ ..|++-..|++|
T Consensus 73 lSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~I 151 (452)
T 3pbp_A 73 SSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTI 151 (452)
T ss_dssp ECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCE
T ss_pred ECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEE
Confidence 578899888875 4578888876321 1223321 35789999999965 589999999999
Q ss_pred EEeecCCCCcc
Q 022074 277 VRWEFPGNGEA 287 (303)
Q Consensus 277 ~~Wd~~~~~~~ 287 (303)
++||+....+.
T Consensus 152 r~yDl~~s~~~ 162 (452)
T 3pbp_A 152 TMFDILNSQEK 162 (452)
T ss_dssp EEEETTCTTSC
T ss_pred EEEEcccCCCC
Confidence 99999864333
No 315
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=82.16 E-value=22 Score=30.72 Aligned_cols=73 Identities=11% Similarity=0.049 Sum_probs=47.5
Q ss_pred CCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEE
Q 022074 35 DGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVW 109 (303)
Q Consensus 35 ~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lW 109 (303)
+..-.+|| ++..|+.-..++.-+.-|.+.+||+.++.....-.=-.+.|..-+... ...-++.....|.|..-
T Consensus 256 ea~~DFPV-amqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~-~~~Gi~~Vnr~GqVl~v 328 (365)
T 2xzh_A 256 EAQNDFPV-AMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHE-ATAGIIGVNRKGQVLSV 328 (365)
T ss_dssp TCTTCCEE-EEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEG-GGTEEEEEETTCEEEEE
T ss_pred cccCCceE-EEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccC-CCCcEEEEcCCCEEEEE
Confidence 35566666 677787777888889999999999999987654333334454444422 23345555566666543
No 316
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=81.40 E-value=11 Score=30.43 Aligned_cols=104 Identities=15% Similarity=0.074 Sum_probs=57.4
Q ss_pred ceEEEEEcCCCCEEEEeeCCCeEEEEECCCCce------EEEEeccc-CCeEEEEEccCCCcEEEEecCCCeEEEEcCcc
Q 022074 41 GIFSLKFSTDGRELVAGSSDDCIYVYDLEANKL------SLRILAHT-SDVNTVCFGDESGHLIYSGSDDNLCKVWDRRC 113 (303)
Q Consensus 41 ~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~------~~~~~~h~-~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~ 113 (303)
.+..++|+|+|...++ .+|.++-.+..+.+. ...+-... ..-.++.| .+++.+.++ .||.|.-++.-.
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~f-D~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFF-DPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEE-CTTSCEEEE--ETTEEEEESCCC
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEE-CCCCCEEEe--CCCEEEEeCCCc
Confidence 4679999999985555 677666555544211 11111100 11256777 456777666 569988777421
Q ss_pred ccCCCccc---eee-cccccCeEEEEeCCCCCEEEEEeCCCcE
Q 022074 114 LNVKGKPA---GVL-MGHLEGITFIDSRGDGRYLISNGKDQAI 152 (303)
Q Consensus 114 ~~~~~~~~---~~~-~~h~~~v~~~~~~~~~~~l~s~~~D~~v 152 (303)
. ....-. ..+ .+--..+..+.+.|+|.+.+.. |+.+
T Consensus 117 ~-~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~l 156 (236)
T 1tl2_A 117 S-DTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQF 156 (236)
T ss_dssp S-TTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEE
T ss_pred C-CCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcE
Confidence 0 011100 011 1111457899999999866666 6663
No 317
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=81.32 E-value=32 Score=31.32 Aligned_cols=116 Identities=14% Similarity=0.165 Sum_probs=65.3
Q ss_pred ceEEEEEcC-CCCEEEEeeC-CCeEEEEECCCCceEEEEecc---cCCeEEEEE-------ccCCCcEEEEecCCC----
Q 022074 41 GIFSLKFST-DGRELVAGSS-DDCIYVYDLEANKLSLRILAH---TSDVNTVCF-------GDESGHLIYSGSDDN---- 104 (303)
Q Consensus 41 ~v~~l~~s~-~g~~l~sgs~-Dg~v~lwd~~~~~~~~~~~~h---~~~v~~l~~-------~~~~~~~l~s~s~dg---- 104 (303)
.-..|+|+| ++..|+++.. .+.|++.|++++.+......- ......++| .++ ++.|+.+...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~-G~~lyvad~~~~~~~ 218 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADE-AEYMIVAIDYDGKGD 218 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCT-TCEEEEEECCCTTGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCC-CCEEEEEeCCCCCcc
Confidence 356889998 4555555544 467999999888765433221 124788888 764 55444444332
Q ss_pred ---eEEEEcCcc-ccCCCcc-ceeecccccCeEEEEeCC-CCCEEEEEeCCCcEEEEEcc
Q 022074 105 ---LCKVWDRRC-LNVKGKP-AGVLMGHLEGITFIDSRG-DGRYLISNGKDQAIKLWDIR 158 (303)
Q Consensus 105 ---~v~lWd~~~-~~~~~~~-~~~~~~h~~~v~~~~~~~-~~~~l~s~~~D~~v~lWdl~ 158 (303)
.|.+.+... ....... ...+... .....+++++ ++.++++-..++.|..+|+.
T Consensus 219 ~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 219 ESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp GEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred cCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 255665321 0111000 0112111 2234556778 56666777788889999986
No 318
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=80.91 E-value=27 Score=30.24 Aligned_cols=117 Identities=15% Similarity=0.229 Sum_probs=67.1
Q ss_pred cceEEEEE--cCC-CC-EEEEeeCCCeEEEEECC---CCce----EEEEecccCCeEEEEEccCCCcEEEEecCCCeEEE
Q 022074 40 FGIFSLKF--STD-GR-ELVAGSSDDCIYVYDLE---ANKL----SLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKV 108 (303)
Q Consensus 40 ~~v~~l~~--s~~-g~-~l~sgs~Dg~v~lwd~~---~~~~----~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~l 108 (303)
..++.+++ ++. ++ ++++...+|.+..|++. .++. ..++. -.+.+..+... +....|+.+-++..|..
T Consensus 128 ~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~-lgsq~EgcvvD-d~~g~Lyv~eEd~GIw~ 205 (355)
T 3amr_A 128 NEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK-MNSQTEGMAAD-DEYGRLYIAEEDEAIWK 205 (355)
T ss_dssp SSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE-CSSCEEEEEEE-TTTTEEEEEETTTEEEE
T ss_pred CCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec-CCCCcceEEEc-CCCCeEEEecccceEEE
Confidence 44666777 664 44 68888899999999883 3322 22222 23456666664 34557778888866555
Q ss_pred EcCcccc-CCCccceee-cccc-cCeEEEEe--CCCCC-EEE-EEeCCCcEEEEEcc
Q 022074 109 WDRRCLN-VKGKPAGVL-MGHL-EGITFIDS--RGDGR-YLI-SNGKDQAIKLWDIR 158 (303)
Q Consensus 109 Wd~~~~~-~~~~~~~~~-~~h~-~~v~~~~~--~~~~~-~l~-s~~~D~~v~lWdl~ 158 (303)
+|.+... ...+.+..+ .++- ..+..+++ .++++ +|+ ++-.+.+.-+||..
T Consensus 206 ~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 206 FSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred EeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 5543111 011222222 1222 24666666 44444 554 45478899999985
No 319
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=80.40 E-value=33 Score=30.91 Aligned_cols=74 Identities=11% Similarity=0.034 Sum_probs=51.1
Q ss_pred CCCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEc
Q 022074 35 DGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWD 110 (303)
Q Consensus 35 ~~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd 110 (303)
+....+|| ++..|+.-..++.-+.-|.+.+||+.++.....-.=..+.|..-+... ...-++.....|.|..-.
T Consensus 255 e~~~DFPv-amqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~-~~~Gi~~Vnr~GqVl~v~ 328 (494)
T 1bpo_A 255 EAQNDFPV-AMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHE-ATAGIIGVNRKGQVLSVC 328 (494)
T ss_dssp TSTTCCEE-EEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEET-TTTEEEEEETTCEEEEEE
T ss_pred ccccCcee-EEEecccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccC-CCCcEEEEccCceEEEEE
Confidence 45666776 677888777888889999999999999987654433445555555533 344566666777775543
No 320
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=77.95 E-value=28 Score=28.76 Aligned_cols=62 Identities=16% Similarity=0.215 Sum_probs=34.1
Q ss_pred CCeEEEEEeCC-----CeEEEEECCCCeEE--EEeecCCCCeEEEEECCCCCeEEEEeCC-----CCEEEeecCCC
Q 022074 221 GQKYIYTGSHD-----SCVYVYDLVSGEQV--AALKYHTSPVRDCSWHPSQPMLVSSSWD-----GDVVRWEFPGN 284 (303)
Q Consensus 221 ~~~~latg~~d-----g~i~iwd~~~~~~~--~~~~~h~~~I~~v~~sp~~~~las~s~D-----g~i~~Wd~~~~ 284 (303)
++++++.||.+ ..+.+||+.+.+=. ..+......-..+.+ ++.+++.|+.+ ..+.++|+...
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~ 241 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETE 241 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCC
Confidence 45666666654 45889998776422 111111111222333 66777777765 45778876543
No 321
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=71.56 E-value=32 Score=30.96 Aligned_cols=108 Identities=16% Similarity=0.068 Sum_probs=57.8
Q ss_pred eEEEEEcCCCC-EEEEeeCCCeEEEEECCCCc---eEEEEe---c------ccCCeEEEEEccC---CCcEEEEecC--C
Q 022074 42 IFSLKFSTDGR-ELVAGSSDDCIYVYDLEANK---LSLRIL---A------HTSDVNTVCFGDE---SGHLIYSGSD--D 103 (303)
Q Consensus 42 v~~l~~s~~g~-~l~sgs~Dg~v~lwd~~~~~---~~~~~~---~------h~~~v~~l~~~~~---~~~~l~s~s~--d 103 (303)
-..|+|.|||. ++++....|.|++++..... ....+. . ...+...++++|+ ++.+.++-+. +
T Consensus 16 P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~ 95 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQE 95 (463)
T ss_dssp EEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCC
T ss_pred ceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCCC
Confidence 46899999996 56677789999999754331 111111 1 1356778999764 2444444332 1
Q ss_pred C----------eEEEEcCcccc--C-C-Cccceeec----ccccCeEEEEeCCCCCEEEEEeCC
Q 022074 104 N----------LCKVWDRRCLN--V-K-GKPAGVLM----GHLEGITFIDSRGDGRYLISNGKD 149 (303)
Q Consensus 104 g----------~v~lWd~~~~~--~-~-~~~~~~~~----~h~~~v~~~~~~~~~~~l~s~~~D 149 (303)
+ .|.-|.+.... . . ......+. .....-..+.|.|||.+.++.|..
T Consensus 96 ~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 96 RWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp SSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 1 23334432110 0 0 01111111 111235678899999888877653
No 322
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=71.02 E-value=42 Score=27.52 Aligned_cols=58 Identities=7% Similarity=0.065 Sum_probs=31.5
Q ss_pred CCEEEEeeC--CCeEEEEECCCCceEEEEecc-c--CCeEEEEEccCCCcEEEEecCC----CeEEEEcCc
Q 022074 51 GRELVAGSS--DDCIYVYDLEANKLSLRILAH-T--SDVNTVCFGDESGHLIYSGSDD----NLCKVWDRR 112 (303)
Q Consensus 51 g~~l~sgs~--Dg~v~lwd~~~~~~~~~~~~h-~--~~v~~l~~~~~~~~~l~s~s~d----g~v~lWd~~ 112 (303)
+..++.|+. ...+.+||..+++... +..- . ..-..+.. ++.+++.|+.+ ..+..||..
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~d~~ 78 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTD-IRCPFEKRRDAACVFW---DNVVYILGGSQLFPIKRMDCYNVV 78 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEE-CCCCSCCCBSCEEEEE---TTEEEEECCBSSSBCCEEEEEETT
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEec-CCCCCcccceeEEEEE---CCEEEEEeCCCCCCcceEEEEeCC
Confidence 334555654 3568999998886432 2111 1 11122222 35677777754 567777764
No 323
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=68.83 E-value=47 Score=27.17 Aligned_cols=61 Identities=16% Similarity=0.124 Sum_probs=32.3
Q ss_pred CCeEEEEEeC-------CCeEEEEECCCCeE--EEEeecCCCCeEEEEECCCCCeEEEEeCC-----CCEEEeecCC
Q 022074 221 GQKYIYTGSH-------DSCVYVYDLVSGEQ--VAALKYHTSPVRDCSWHPSQPMLVSSSWD-----GDVVRWEFPG 283 (303)
Q Consensus 221 ~~~~latg~~-------dg~i~iwd~~~~~~--~~~~~~h~~~I~~v~~sp~~~~las~s~D-----g~i~~Wd~~~ 283 (303)
++++++.||. -..+.+||+.+.+= +..+......-..+.+ ++.+++.|+.+ ..+.++|+..
T Consensus 155 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~ 229 (302)
T 2xn4_A 155 GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTT 229 (302)
T ss_dssp TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTT
T ss_pred CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCC
Confidence 3555666653 24588999887642 2222111111122222 56777777765 3577777654
No 324
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=68.61 E-value=52 Score=27.67 Aligned_cols=40 Identities=10% Similarity=-0.021 Sum_probs=20.6
Q ss_pred eEEEEECCCCe--EEEEeecCCCCeEEEEECCCCCeEEEEeCCC
Q 022074 233 CVYVYDLVSGE--QVAALKYHTSPVRDCSWHPSQPMLVSSSWDG 274 (303)
Q Consensus 233 ~i~iwd~~~~~--~~~~~~~h~~~I~~v~~sp~~~~las~s~Dg 274 (303)
.+.+||+.+.+ .+..+......-. +...++++++.|+.++
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~~~--~~~~~~~i~v~GG~~~ 327 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAYGV--SLPWNNSLLIIGGETA 327 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBSSE--EEEETTEEEEEEEECG
T ss_pred eEEEEecCCCceeeCCCCCCCcccce--eEEeCCEEEEEeeeCC
Confidence 57889987653 3444332222222 2334677888888653
No 325
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=68.06 E-value=50 Score=27.25 Aligned_cols=51 Identities=12% Similarity=0.151 Sum_probs=27.7
Q ss_pred CCeEEEEEeCCC-----eEEEEECCCCeE--EEEeecCCCCeEEEEECCCCCeEEEEeCC
Q 022074 221 GQKYIYTGSHDS-----CVYVYDLVSGEQ--VAALKYHTSPVRDCSWHPSQPMLVSSSWD 273 (303)
Q Consensus 221 ~~~~latg~~dg-----~i~iwd~~~~~~--~~~~~~h~~~I~~v~~sp~~~~las~s~D 273 (303)
++++++.||.++ .+.+||+.+.+= +..+......-..+.+ ++++++.|+.+
T Consensus 196 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~ 253 (315)
T 4asc_A 196 DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSL--VGTLYAIGGFA 253 (315)
T ss_dssp TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEE
T ss_pred CCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEEE--CCEEEEECCcc
Confidence 466777777544 588999987642 2211111111222222 66777777764
No 326
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=68.00 E-value=30 Score=29.60 Aligned_cols=64 Identities=14% Similarity=0.173 Sum_probs=40.6
Q ss_pred eeeeCCCeEEEEEeCCCeEEEEECCCCeE--EEEee---cCCCCeEEEEECCC----CCeEEEEeCC-----CCEEEeec
Q 022074 216 PVYSTGQKYIYTGSHDSCVYVYDLVSGEQ--VAALK---YHTSPVRDCSWHPS----QPMLVSSSWD-----GDVVRWEF 281 (303)
Q Consensus 216 ~~~s~~~~~latg~~dg~i~iwd~~~~~~--~~~~~---~h~~~I~~v~~sp~----~~~las~s~D-----g~i~~Wd~ 281 (303)
..+.++++++++ ..+|.|++++ .++. +..+. ........++|+|+ +.+.++-..+ ..|..++.
T Consensus 36 ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~ 112 (352)
T 2ism_A 36 LAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRH 112 (352)
T ss_dssp EEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEE
T ss_pred EEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEe
Confidence 456788986555 5569999998 4442 22222 12356899999998 4455554433 56777776
Q ss_pred C
Q 022074 282 P 282 (303)
Q Consensus 282 ~ 282 (303)
.
T Consensus 113 ~ 113 (352)
T 2ism_A 113 L 113 (352)
T ss_dssp C
T ss_pred C
Confidence 5
No 327
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=66.06 E-value=5.2 Score=32.46 Aligned_cols=63 Identities=8% Similarity=0.048 Sum_probs=41.3
Q ss_pred eeeCCCeEEEEEeCCCeEEEEECCCCeE------EEEee--cCCCCeEEEEECCCCCeEEEEeCCCCEEEeecCCC
Q 022074 217 VYSTGQKYIYTGSHDSCVYVYDLVSGEQ------VAALK--YHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPGN 284 (303)
Q Consensus 217 ~~s~~~~~latg~~dg~i~iwd~~~~~~------~~~~~--~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~~~ 284 (303)
.|+|++.+.+. .+|.++-.+..+.+. ...+. +-.. -..+.|.|+|.+.++ .||.|..|+.+.+
T Consensus 47 af~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~pP~~ 117 (236)
T 1tl2_A 47 FLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASPPQS 117 (236)
T ss_dssp EECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESCCCS
T ss_pred EECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe--CCCEEEEeCCCcC
Confidence 47788886665 778777777654211 11121 1111 478999999998888 5699999986543
No 328
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=65.81 E-value=56 Score=28.06 Aligned_cols=69 Identities=10% Similarity=0.154 Sum_probs=45.0
Q ss_pred eeeeeCCCeEEEEEeCCCeEEEEECCCCeE--EEEe----ecCCCCeEEEEECCC----CCeEEEE--eCCCCEEEeecC
Q 022074 215 SPVYSTGQKYIYTGSHDSCVYVYDLVSGEQ--VAAL----KYHTSPVRDCSWHPS----QPMLVSS--SWDGDVVRWEFP 282 (303)
Q Consensus 215 ~~~~s~~~~~latg~~dg~i~iwd~~~~~~--~~~~----~~h~~~I~~v~~sp~----~~~las~--s~Dg~i~~Wd~~ 282 (303)
...+.|+++++++--..|.|++++...++. +..+ .........++|+|+ +.+.++- ..++.|..|+..
T Consensus 36 ~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~ 115 (347)
T 3das_A 36 GLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYD 115 (347)
T ss_dssp EEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBC
T ss_pred EEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEEEeC
Confidence 445778999888776689999998766653 2222 123456899999996 4444432 245566667665
Q ss_pred C
Q 022074 283 G 283 (303)
Q Consensus 283 ~ 283 (303)
.
T Consensus 116 ~ 116 (347)
T 3das_A 116 E 116 (347)
T ss_dssp T
T ss_pred C
Confidence 4
No 329
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=63.17 E-value=63 Score=26.63 Aligned_cols=61 Identities=13% Similarity=0.080 Sum_probs=32.9
Q ss_pred CCeEEEEEeC------CCeEEEEECCCCeE--EEEeecCCCCeEEEEECCCCCeEEEEeCCC-----CEEEeecCC
Q 022074 221 GQKYIYTGSH------DSCVYVYDLVSGEQ--VAALKYHTSPVRDCSWHPSQPMLVSSSWDG-----DVVRWEFPG 283 (303)
Q Consensus 221 ~~~~latg~~------dg~i~iwd~~~~~~--~~~~~~h~~~I~~v~~sp~~~~las~s~Dg-----~i~~Wd~~~ 283 (303)
++++++.||. -..+.+||+.+.+= +..+......-..+.+ ++++++.|+.++ .+.++|+..
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~ 221 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITD 221 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTT
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCC
Confidence 4566677765 24689999887642 2111111111122222 667777777655 366777654
No 330
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=61.53 E-value=17 Score=31.27 Aligned_cols=114 Identities=7% Similarity=-0.062 Sum_probs=59.9
Q ss_pred CCEEEEeeCCCeEEEEECCCCceEEEEecc-cCCeEEEEE--ccCCCcEEEEe-cCCCeEEEEcCccccCCCc-cceeec
Q 022074 51 GRELVAGSSDDCIYVYDLEANKLSLRILAH-TSDVNTVCF--GDESGHLIYSG-SDDNLCKVWDRRCLNVKGK-PAGVLM 125 (303)
Q Consensus 51 g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h-~~~v~~l~~--~~~~~~~l~s~-s~dg~v~lWd~~~~~~~~~-~~~~~~ 125 (303)
+..+++++.||.|.-+|.++|+..-++... ..++....- .+.++..++.. +.||.+..++......... ....+.
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 347899999999999999999876555432 112221111 01122344333 5789998888642211000 000000
Q ss_pred ccccCeEEE---Ee-----CCCCCEEEEEeCCCcEEEEEcccccCCcc
Q 022074 126 GHLEGITFI---DS-----RGDGRYLISNGKDQAIKLWDIRKMSSNAS 165 (303)
Q Consensus 126 ~h~~~v~~~---~~-----~~~~~~l~s~~~D~~v~lWdl~~~~~~~~ 165 (303)
...++..- .+ ...+..+++++.++.+...|++.......
T Consensus 90 -~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~ 136 (339)
T 2be1_A 90 -STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISA 136 (339)
T ss_dssp -TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEE
T ss_pred -eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEE
Confidence 11112110 00 01345788888999998888876554433
No 331
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=58.45 E-value=1.2e+02 Score=28.27 Aligned_cols=112 Identities=9% Similarity=0.003 Sum_probs=66.2
Q ss_pred ceEEEEEcCCCCEEEEee-CCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCc
Q 022074 41 GIFSLKFSTDGRELVAGS-SDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGK 119 (303)
Q Consensus 41 ~v~~l~~s~~g~~l~sgs-~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~ 119 (303)
.+.+|+|.+.++.|+.+. ..+.|+.++++.......+...-.....+++....+++..+-+..+.|.+.++.. .
T Consensus 350 ~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G-----~ 424 (619)
T 3s94_A 350 HAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNG-----T 424 (619)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS-----C
T ss_pred ccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCC-----C
Confidence 467899998666655544 5778988988765443333323345677887544566777777788998887642 2
Q ss_pred cceee-cccccCeEEEEeCCC-CCEEEEEeC-CCcEEEEEc
Q 022074 120 PAGVL-MGHLEGITFIDSRGD-GRYLISNGK-DQAIKLWDI 157 (303)
Q Consensus 120 ~~~~~-~~h~~~v~~~~~~~~-~~~l~s~~~-D~~v~lWdl 157 (303)
....+ .........+++.|. |.++.|-.. ...|...++
T Consensus 425 ~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~ 465 (619)
T 3s94_A 425 MRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAAL 465 (619)
T ss_dssp SCEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred eEEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEcc
Confidence 22222 223345677888875 544444422 234444443
No 332
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=57.95 E-value=36 Score=29.18 Aligned_cols=66 Identities=20% Similarity=0.288 Sum_probs=40.7
Q ss_pred eeeeCCCeEEEEEeCCCeEEEEECCCCe-EEEEee---cCCCCeEEEEECCC----CCeEEEEeC---C----CCEEEee
Q 022074 216 PVYSTGQKYIYTGSHDSCVYVYDLVSGE-QVAALK---YHTSPVRDCSWHPS----QPMLVSSSW---D----GDVVRWE 280 (303)
Q Consensus 216 ~~~s~~~~~latg~~dg~i~iwd~~~~~-~~~~~~---~h~~~I~~v~~sp~----~~~las~s~---D----g~i~~Wd 280 (303)
..+.++++++++ ..+|.|+++|. .++ .+..+. ........++|+|+ +.+.++-+. + ..|..|+
T Consensus 34 ia~~pdG~l~V~-e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~ 111 (354)
T 3a9g_A 34 IAPLGGGRYLVT-ERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGR 111 (354)
T ss_dssp EEEEETTEEEEE-ETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEE
T ss_pred EEEcCCCeEEEE-eCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEE
Confidence 446778886555 55699999974 454 232221 12346899999998 555555442 3 5677777
Q ss_pred cCC
Q 022074 281 FPG 283 (303)
Q Consensus 281 ~~~ 283 (303)
...
T Consensus 112 ~~~ 114 (354)
T 3a9g_A 112 LDG 114 (354)
T ss_dssp ECS
T ss_pred ECC
Confidence 653
No 333
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=55.57 E-value=1.1e+02 Score=28.49 Aligned_cols=30 Identities=23% Similarity=0.424 Sum_probs=24.1
Q ss_pred eEEEEeCCCCCEEEEEe-CCCcEEEEEcccc
Q 022074 131 ITFIDSRGDGRYLISNG-KDQAIKLWDIRKM 160 (303)
Q Consensus 131 v~~~~~~~~~~~l~s~~-~D~~v~lWdl~~~ 160 (303)
.+.+.++|||++++.++ .+.++.++|.++.
T Consensus 325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~ 355 (638)
T 3sbq_A 325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKL 355 (638)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGH
T ss_pred CcceeeCCCCCEEEEcCCCCCeEEEEEeehh
Confidence 34677899999987766 5899999998864
No 334
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=55.13 E-value=34 Score=32.72 Aligned_cols=34 Identities=21% Similarity=0.193 Sum_probs=26.7
Q ss_pred ceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEE
Q 022074 41 GIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLR 76 (303)
Q Consensus 41 ~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~ 76 (303)
.|.++.+ +..++++-+.|.++|+|++++++....
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t 256 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQD 256 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEe
Confidence 3555444 367999999999999999999986543
No 335
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=54.97 E-value=48 Score=29.59 Aligned_cols=57 Identities=12% Similarity=0.179 Sum_probs=36.3
Q ss_pred eeeeeCCCeEEEEEeCCCeEEEEECCCCeE--EEEeec------CCCCeEEEEECCC----CCeEEEEe
Q 022074 215 SPVYSTGQKYIYTGSHDSCVYVYDLVSGEQ--VAALKY------HTSPVRDCSWHPS----QPMLVSSS 271 (303)
Q Consensus 215 ~~~~s~~~~~latg~~dg~i~iwd~~~~~~--~~~~~~------h~~~I~~v~~sp~----~~~las~s 271 (303)
...+.|+++++++--..+.|++++..+++. +..+.. .+..+..|+|+|+ +.+.++-+
T Consensus 31 ~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s 99 (454)
T 1cru_A 31 ALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGT 99 (454)
T ss_dssp EEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEE
T ss_pred EEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEe
Confidence 345778999877765556899998765543 223321 2456789999995 44555543
No 336
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=53.05 E-value=24 Score=35.01 Aligned_cols=36 Identities=31% Similarity=0.210 Sum_probs=31.3
Q ss_pred ceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEE
Q 022074 41 GIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLR 76 (303)
Q Consensus 41 ~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~ 76 (303)
.+.++...++..++++-+.|+++|+|++.+++....
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t 272 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 272 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEee
Confidence 567888888889999999999999999999986654
No 337
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=52.90 E-value=1.5e+02 Score=27.90 Aligned_cols=107 Identities=16% Similarity=0.155 Sum_probs=53.0
Q ss_pred CCCCEEEEeeCC----CeEEEEECCCCceEEEE-e-----cccCC-eEEEEEccCCCcEEEEecCCC------eEEEEcC
Q 022074 49 TDGRELVAGSSD----DCIYVYDLEANKLSLRI-L-----AHTSD-VNTVCFGDESGHLIYSGSDDN------LCKVWDR 111 (303)
Q Consensus 49 ~~g~~l~sgs~D----g~v~lwd~~~~~~~~~~-~-----~h~~~-v~~l~~~~~~~~~l~s~s~dg------~v~lWd~ 111 (303)
.++..++.||.+ ..+.+||..+++....- . ..... -.+++....++++++.|+.++ .+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 567777788754 35889999887644322 1 01111 112222221466777776533 4667776
Q ss_pred ccccCCCccceeecccccCeEEEEeCCCCCEEEEEeCCC--cEEEEEcc
Q 022074 112 RCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQ--AIKLWDIR 158 (303)
Q Consensus 112 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~D~--~v~lWdl~ 158 (303)
... .......+......- +.....++..++.||.++ .+.+||+.
T Consensus 476 ~t~--~W~~~~~~p~~R~~h-~~~~~~~~~iyv~GG~~~~~~v~~yd~~ 521 (695)
T 2zwa_A 476 KTR--EWSMIKSLSHTRFRH-SACSLPDGNVLILGGVTEGPAMLLYNVT 521 (695)
T ss_dssp TTT--EEEECCCCSBCCBSC-EEEECTTSCEEEECCBCSSCSEEEEETT
T ss_pred CCC--cEEECCCCCCCcccc-eEEEEcCCEEEEECCCCCCCCEEEEECC
Confidence 421 111111111111111 222223677888888655 57777764
No 338
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=52.14 E-value=1.5e+02 Score=27.61 Aligned_cols=103 Identities=12% Similarity=0.112 Sum_probs=63.3
Q ss_pred ceEEEEEcCCCCEEEEee-CCCeEEEEECCCCceEEEEec------ccCCeEEEEEccCCCcEEEEecCCCeEEEEcCcc
Q 022074 41 GIFSLKFSTDGRELVAGS-SDDCIYVYDLEANKLSLRILA------HTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRC 113 (303)
Q Consensus 41 ~v~~l~~s~~g~~l~sgs-~Dg~v~lwd~~~~~~~~~~~~------h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~ 113 (303)
.+.+|+|.+.++.|+-.. ..+.|+.++++.......+.. ....+..+++....+++..+-+..+.|.+.++.
T Consensus 341 ~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~- 419 (628)
T 4a0p_A 341 NVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLD- 419 (628)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETT-
T ss_pred CceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECC-
Confidence 477899998766666554 467788888765443222322 223577888854446677777788888888763
Q ss_pred ccCCCcccee-ecccccCeEEEEeCC-CCCEEEEEeC
Q 022074 114 LNVKGKPAGV-LMGHLEGITFIDSRG-DGRYLISNGK 148 (303)
Q Consensus 114 ~~~~~~~~~~-~~~h~~~v~~~~~~~-~~~~l~s~~~ 148 (303)
+..... +.........+++.| .|.++.|-..
T Consensus 420 ----G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g 452 (628)
T 4a0p_A 420 ----GRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQ 452 (628)
T ss_dssp ----SCEEEEEEECTTCCEEEEEEETTTTEEEEEEEE
T ss_pred ----CCeEEEEEeCCCCceeeEEEecCCCeEEEeecC
Confidence 222222 223345677888888 5555555443
No 339
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=51.48 E-value=1.1e+02 Score=25.90 Aligned_cols=54 Identities=13% Similarity=0.126 Sum_probs=30.3
Q ss_pred CCeEEEEEccCCCc-EEEEecCCCeEEEEcCccccCCCccce----eecccccCeEEEEeCCC
Q 022074 82 SDVNTVCFGDESGH-LIYSGSDDNLCKVWDRRCLNVKGKPAG----VLMGHLEGITFIDSRGD 139 (303)
Q Consensus 82 ~~v~~l~~~~~~~~-~l~s~s~dg~v~lWd~~~~~~~~~~~~----~~~~h~~~v~~~~~~~~ 139 (303)
.....++|.+ +++ ++ .+...|.|++++.... .. .+.. .+.........++++|+
T Consensus 18 ~~P~~i~~~p-dG~~l~-V~e~~G~i~~~~~~g~-~~-~~~~~~~~v~~~g~~g~~gia~~pd 76 (353)
T 2g8s_A 18 DHPWALAFLP-DNHGML-ITLRGGELRHWQAGKG-LS-APLSGVPDVWAHGQGGLLDVVLAPD 76 (353)
T ss_dssp SSEEEEEECS-TTCCEE-EEETTTEEEEEETTTE-EC-CCCBSCCCCCCSTTCSEEEEEECTT
T ss_pred CCcEEEEEcC-CCCEEE-EEeCCceEEEEeCCCc-ee-eEecCCcccccCCCCCceeEEECCC
Confidence 4567888865 566 55 4556789998874311 00 1111 11122345678889885
No 340
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=50.41 E-value=61 Score=30.19 Aligned_cols=54 Identities=17% Similarity=0.151 Sum_probs=36.9
Q ss_pred eeeCCCeEEEEEeCC------------CeEEEEECCCCeEEEEeecC-CCCeEEEEECCCCCeEEEE
Q 022074 217 VYSTGQKYIYTGSHD------------SCVYVYDLVSGEQVAALKYH-TSPVRDCSWHPSQPMLVSS 270 (303)
Q Consensus 217 ~~s~~~~~latg~~d------------g~i~iwd~~~~~~~~~~~~h-~~~I~~v~~sp~~~~las~ 270 (303)
.|++.|.++++-..+ ..+.+.+..+++....+.++ ..+++.++|+||++.|...
T Consensus 482 ~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 482 GFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred EECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 367778766654322 34666677777765555554 4689999999999877665
No 341
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=48.81 E-value=2.3e+02 Score=28.74 Aligned_cols=91 Identities=4% Similarity=-0.023 Sum_probs=54.2
Q ss_pred eEEEEECCCCceEEEEecc-cCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCccceeecccccCeEEEEeCCC-
Q 022074 62 CIYVYDLEANKLSLRILAH-TSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGD- 139 (303)
Q Consensus 62 ~v~lwd~~~~~~~~~~~~h-~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~- 139 (303)
.|++.+...+.....+... ...|...+.+. .+++.++ ++.+.++++...... ..... .-...|.|+++.+.
T Consensus 493 ~Irli~~~~~~~~~~w~~p~~~~I~~As~n~---~~vvva~-g~~l~~fel~~~~L~--~~~~~-~l~~evscl~i~~~~ 565 (1158)
T 3ei3_A 493 SVRLVSQEPKALVSEWKEPQAKNISVASCNS---SQVVVAV-GRALYYLQIHPQELR--QISHT-EMEHEVACLDITPLG 565 (1158)
T ss_dssp CEEEEESSSCCEEEEECCTTCCCCCEEEECS---SEEEEEE-TTEEEEEEEETTEEE--EEEEE-ECSSCEEEEECCCCS
T ss_pred EEEEEECCCCeEEEEEECCCCCEEEEEEeCC---CEEEEEE-CCEEEEEEeeCCcee--eeccc-CCCCceEEEEeecCC
Confidence 4788887665555555433 23466665532 3555554 678888765421111 01111 12346889888653
Q ss_pred -----CCEEEEEeC-CCcEEEEEccc
Q 022074 140 -----GRYLISNGK-DQAIKLWDIRK 159 (303)
Q Consensus 140 -----~~~l~s~~~-D~~v~lWdl~~ 159 (303)
+.+++.|.. |++++++++..
T Consensus 566 ~~~~~s~~~aVg~~~d~tv~I~sL~~ 591 (1158)
T 3ei3_A 566 DSNGLSPLCAIGLWTDISARILKLPS 591 (1158)
T ss_dssp SSTTCCSEEEEEETTTTEEEEEETTT
T ss_pred CCcccccEEEEEECCCCEEEEEECCC
Confidence 368888886 99999999864
No 342
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=48.49 E-value=62 Score=30.06 Aligned_cols=55 Identities=16% Similarity=0.163 Sum_probs=36.0
Q ss_pred eeeCCCeEEE-EEeC-----------CCeEEEEECCCCeEEEEeecC-CCCeEEEEECCCCCeEEEEe
Q 022074 217 VYSTGQKYIY-TGSH-----------DSCVYVYDLVSGEQVAALKYH-TSPVRDCSWHPSQPMLVSSS 271 (303)
Q Consensus 217 ~~s~~~~~la-tg~~-----------dg~i~iwd~~~~~~~~~~~~h-~~~I~~v~~sp~~~~las~s 271 (303)
.|.++|.+.+ +-.. ...++.++..+++....+... ...++.++||||++.|..+-
T Consensus 482 ~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 482 GFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred EECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 4666676655 4321 226777788778765444443 35789999999999766553
No 343
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=43.08 E-value=35 Score=33.78 Aligned_cols=31 Identities=19% Similarity=0.187 Sum_probs=26.6
Q ss_pred eeCCCeEEEEEeCCCeEEEEECCCCeEEEEe
Q 022074 218 YSTGQKYIYTGSHDSCVYVYDLVSGEQVAAL 248 (303)
Q Consensus 218 ~s~~~~~latg~~dg~i~iwd~~~~~~~~~~ 248 (303)
..++..++.+-+.|+++|+|++.+++++.+.
T Consensus 243 ~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 243 FLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp EETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred ecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 3456789999999999999999999987765
No 344
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=42.87 E-value=1.4e+02 Score=24.48 Aligned_cols=61 Identities=13% Similarity=0.213 Sum_probs=31.0
Q ss_pred CCeEEEEEeC------CCeEEEEECCCCeE--EEEeecCCCCeEEEEECCCCCeEEEEeCCC-----CEEEeecCC
Q 022074 221 GQKYIYTGSH------DSCVYVYDLVSGEQ--VAALKYHTSPVRDCSWHPSQPMLVSSSWDG-----DVVRWEFPG 283 (303)
Q Consensus 221 ~~~~latg~~------dg~i~iwd~~~~~~--~~~~~~h~~~I~~v~~sp~~~~las~s~Dg-----~i~~Wd~~~ 283 (303)
++++++.||. -..+.+||+.+.+= +..+......-..+. -++++++.|+.++ .+.++|+..
T Consensus 158 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~ 231 (318)
T 2woz_A 158 NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAI--HKGKIVIAGGVTEDGLSASVEAFDLKT 231 (318)
T ss_dssp TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEEEEEETTEEEEEEEEEETTT
T ss_pred CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEE--ECCEEEEEcCcCCCCccceEEEEECCC
Confidence 4566666653 24588999887642 211111111112222 2567777766543 355666554
No 345
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=42.84 E-value=34 Score=31.80 Aligned_cols=66 Identities=12% Similarity=0.116 Sum_probs=48.8
Q ss_pred eeeCCCeEEEEEe-CCCeEEEEECCCCe-------------EEEEeecCCCCeEEEEECCCCCeEEEEeCCCCEEEeecC
Q 022074 217 VYSTGQKYIYTGS-HDSCVYVYDLVSGE-------------QVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFP 282 (303)
Q Consensus 217 ~~s~~~~~latg~-~dg~i~iwd~~~~~-------------~~~~~~~h~~~I~~v~~sp~~~~las~s~Dg~i~~Wd~~ 282 (303)
..+|||++++.++ .+.++.++|.+... .+...+. .-.....+|.++|+-..|--.|..+..|++.
T Consensus 329 ~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~-GlGPlHt~Fd~~G~aYTtlfidSqvvkWni~ 407 (638)
T 3sbq_A 329 NTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL-GLGPLHTTFDGRGNAYTTLFIDSQVVKWNME 407 (638)
T ss_dssp EECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC-CSCEEEEEECSSSEEEEEETTTTEEEEEEHH
T ss_pred eeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccC-CCcccEEEECCCCceEeeeeecceEEEEecc
Confidence 3689999988766 78999999987421 1333332 2346789999999767777789999999985
Q ss_pred C
Q 022074 283 G 283 (303)
Q Consensus 283 ~ 283 (303)
.
T Consensus 408 ~ 408 (638)
T 3sbq_A 408 E 408 (638)
T ss_dssp H
T ss_pred H
Confidence 3
No 346
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=42.36 E-value=31 Score=32.98 Aligned_cols=30 Identities=13% Similarity=0.290 Sum_probs=25.9
Q ss_pred CCeEEEEEeCCCeEEEEECCCCeEEEEeec
Q 022074 221 GQKYIYTGSHDSCVYVYDLVSGEQVAALKY 250 (303)
Q Consensus 221 ~~~~latg~~dg~i~iwd~~~~~~~~~~~~ 250 (303)
+..++++-+.|.++|+||+++++++.+...
T Consensus 230 ~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 230 HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 467999999999999999999998776643
No 347
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=42.35 E-value=32 Score=34.84 Aligned_cols=31 Identities=19% Similarity=0.145 Sum_probs=26.6
Q ss_pred eCCCeEEEEEeCCCeEEEEECCCCeEEEEee
Q 022074 219 STGQKYIYTGSHDSCVYVYDLVSGEQVAALK 249 (303)
Q Consensus 219 s~~~~~latg~~dg~i~iwd~~~~~~~~~~~ 249 (303)
.++..++++-+.|+++|+|++.+++++.+..
T Consensus 246 ~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 246 LSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp ETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred cCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 4567899999999999999999999877653
No 348
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=38.56 E-value=26 Score=35.46 Aligned_cols=36 Identities=31% Similarity=0.210 Sum_probs=29.3
Q ss_pred ceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEE
Q 022074 41 GIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLR 76 (303)
Q Consensus 41 ~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~ 76 (303)
.+.++...++..++++-+.|+++|||++.+++....
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t 274 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 274 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEe
Confidence 344556667888999999999999999999986654
No 349
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=37.91 E-value=1.7e+02 Score=23.97 Aligned_cols=51 Identities=14% Similarity=0.212 Sum_probs=25.8
Q ss_pred CCeEEEEEeCC-----CeEEEEECCCCeE--EEEeecCCCCeEEEEECCCCCeEEEEeCC
Q 022074 221 GQKYIYTGSHD-----SCVYVYDLVSGEQ--VAALKYHTSPVRDCSWHPSQPMLVSSSWD 273 (303)
Q Consensus 221 ~~~~latg~~d-----g~i~iwd~~~~~~--~~~~~~h~~~I~~v~~sp~~~~las~s~D 273 (303)
++++++.||.+ ..+.+||+.+.+= +..+......-..+. .++++++.|+.+
T Consensus 206 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~ 263 (318)
T 2woz_A 206 KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVS--LAGSLYAIGGFA 263 (318)
T ss_dssp TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEE--ETTEEEEECCBC
T ss_pred CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEE--ECCEEEEECCee
Confidence 45666666643 3578899877642 222211111112222 356777777654
No 350
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=34.45 E-value=1.2e+02 Score=25.34 Aligned_cols=25 Identities=4% Similarity=0.105 Sum_probs=15.1
Q ss_pred CCeEEEEEeCCC------eEEEEECCCCeEE
Q 022074 221 GQKYIYTGSHDS------CVYVYDLVSGEQV 245 (303)
Q Consensus 221 ~~~~latg~~dg------~i~iwd~~~~~~~ 245 (303)
++++++.||.++ .+.++++++++.+
T Consensus 316 ~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~ 346 (357)
T 2uvk_A 316 NNSLLIIGGETAGGKAVTDSVLITVKDNKVT 346 (357)
T ss_dssp TTEEEEEEEECGGGCEEEEEEEEEC-CCSCE
T ss_pred CCEEEEEeeeCCCCCEeeeEEEEEEcCcEeE
Confidence 567777787542 3566677776543
No 351
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=33.85 E-value=2.2e+02 Score=24.18 Aligned_cols=69 Identities=9% Similarity=0.005 Sum_probs=35.4
Q ss_pred cceEEEEEcC-CCCEEEEeeCCC----eEEEEECCCCceEEEEec--------------ccCCeEEEEEccCC-CcEEEE
Q 022074 40 FGIFSLKFST-DGRELVAGSSDD----CIYVYDLEANKLSLRILA--------------HTSDVNTVCFGDES-GHLIYS 99 (303)
Q Consensus 40 ~~v~~l~~s~-~g~~l~sgs~Dg----~v~lwd~~~~~~~~~~~~--------------h~~~v~~l~~~~~~-~~~l~s 99 (303)
..|.+|.+.| +...+.+++..| .|... .+.++....+.. ....|..+++.+.+ +..+..
T Consensus 55 ~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s-~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~ 133 (394)
T 3b7f_A 55 HTIHHIVQDPREPERMLMAARTGHLGPTVFRS-DDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYA 133 (394)
T ss_dssp SEEEEEEECSSSTTCEEEEEEC--CCEEEEEE-SSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEE
T ss_pred CceEEEEECCCCCCeEEEEecCCCCCccEEEe-CCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEE
Confidence 4689999998 344555565555 44433 233433332221 11246677776533 444555
Q ss_pred ecCCCeEEEE
Q 022074 100 GSDDNLCKVW 109 (303)
Q Consensus 100 ~s~dg~v~lW 109 (303)
+...+.|...
T Consensus 134 g~~~ggl~~S 143 (394)
T 3b7f_A 134 GTSPQGLFRS 143 (394)
T ss_dssp EEETTEEEEE
T ss_pred EecCCcEEEE
Confidence 5555555544
No 352
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=31.55 E-value=3.3e+02 Score=25.55 Aligned_cols=62 Identities=16% Similarity=0.286 Sum_probs=37.8
Q ss_pred CCCEEEEeeCCC--eEEEEECCCCceEEEEec------ccCCeEEEEEccCCCcEEEEecC--C-----CeEEEEcCc
Q 022074 50 DGRELVAGSSDD--CIYVYDLEANKLSLRILA------HTSDVNTVCFGDESGHLIYSGSD--D-----NLCKVWDRR 112 (303)
Q Consensus 50 ~g~~l~sgs~Dg--~v~lwd~~~~~~~~~~~~------h~~~v~~l~~~~~~~~~l~s~s~--d-----g~v~lWd~~ 112 (303)
+++.++.|+.++ .+.+||..+..... +.. .-..-.++.+....+++++.|+. + ..+..||+.
T Consensus 500 ~~~iyv~GG~~~~~~v~~yd~~t~~W~~-~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~ 576 (695)
T 2zwa_A 500 DGNVLILGGVTEGPAMLLYNVTEEIFKD-VTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYD 576 (695)
T ss_dssp TSCEEEECCBCSSCSEEEEETTTTEEEE-CCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEEC
T ss_pred CCEEEEECCCCCCCCEEEEECCCCceEE-ccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEcc
Confidence 788888888655 68999998886432 221 11122334444333667777765 2 357788865
No 353
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=28.96 E-value=3.1e+02 Score=24.38 Aligned_cols=29 Identities=21% Similarity=0.119 Sum_probs=20.4
Q ss_pred cCeEEEEeCCCCC-EEEEEeCCCcEEEEEc
Q 022074 129 EGITFIDSRGDGR-YLISNGKDQAIKLWDI 157 (303)
Q Consensus 129 ~~v~~~~~~~~~~-~l~s~~~D~~v~lWdl 157 (303)
..-+.+++.|++. .++.+...|.|++++.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~ 43 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTP 43 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeC
Confidence 4456788899985 3444456799999864
No 354
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=26.87 E-value=2.5e+02 Score=29.55 Aligned_cols=72 Identities=11% Similarity=0.032 Sum_probs=43.9
Q ss_pred CCcccceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEE
Q 022074 36 GGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVW 109 (303)
Q Consensus 36 ~~~~~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lW 109 (303)
....+|| ++..|+.-..+..-+.-|.+.+||+.++.....-.=....|...+...+ ..-++.....|.|.--
T Consensus 256 ~~~Dfpv-~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~-~~g~~~vnr~G~vl~v 327 (1630)
T 1xi4_A 256 AQNDFPV-AMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEA-TAGIIGVNRKGQVLSV 327 (1630)
T ss_pred cccCcce-EEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEEeccCCC-CCceEEEcCCceEEEE
Confidence 5566666 5677777777888889999999999999765322212233444443222 2334455566655443
No 355
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=24.83 E-value=4.3e+02 Score=24.72 Aligned_cols=106 Identities=16% Similarity=0.155 Sum_probs=58.0
Q ss_pred cceEEEEEcCCCCEEEEeeCCCeEEEEECCCCceEEEEecccCCeEEEEEccCCCcEEEEecCCCeEEEEcCccccCCCc
Q 022074 40 FGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNLCKVWDRRCLNVKGK 119 (303)
Q Consensus 40 ~~v~~l~~s~~g~~l~sgs~Dg~v~lwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~v~lWd~~~~~~~~~ 119 (303)
..|.++....+| .|-.|+.+| +..||..+++...........|.++.. . ++.+. .++.+ -+..+|.... .
T Consensus 63 ~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~-~g~lW-igt~~-Gl~~~~~~~~----~ 132 (758)
T 3ott_A 63 TRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMAL-Q-GDTLW-LGALN-GLYTYQLQSR----K 132 (758)
T ss_dssp SCEEEEEEETTT-EEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEE-E-TTEEE-EEETT-EEEEEETTTC----C
T ss_pred ceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEe-c-CCcEE-EEcCC-cceeEeCCCC----e
Confidence 358888777665 566677776 889999876532211111234666654 2 35444 45544 5677775321 1
Q ss_pred cceeec----c-cccCeEEEEeCCCCCEEEEEeCCCcEEEEEcc
Q 022074 120 PAGVLM----G-HLEGITFIDSRGDGRYLISNGKDQAIKLWDIR 158 (303)
Q Consensus 120 ~~~~~~----~-h~~~v~~~~~~~~~~~l~s~~~D~~v~lWdl~ 158 (303)
...+. + ....|.++....++.+.+ +.. +.+..+|..
T Consensus 133 -~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~-~Gl~~~~~~ 173 (758)
T 3ott_A 133 -LTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTY-NGLCRYIPS 173 (758)
T ss_dssp -EEEECHHHHCCSCSCEEEEEECTTCCEEE-EET-TEEEEEETT
T ss_pred -EEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeC-CCHhhCccC
Confidence 11110 1 123577777777777655 444 456667754
No 356
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=22.09 E-value=2e+02 Score=24.43 Aligned_cols=28 Identities=7% Similarity=0.112 Sum_probs=23.4
Q ss_pred eEEEEEeCCCeEEEEECCCCeEEEEeec
Q 022074 223 KYIYTGSHDSCVYVYDLVSGEQVAALKY 250 (303)
Q Consensus 223 ~~latg~~dg~i~iwd~~~~~~~~~~~~ 250 (303)
..++.++.||.|+-.|..+|+.+=.++.
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~ 38 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEP 38 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECG
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecC
Confidence 4688899999999999999998766553
No 357
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=20.46 E-value=3.9e+02 Score=24.72 Aligned_cols=55 Identities=16% Similarity=0.285 Sum_probs=32.8
Q ss_pred EEEEEcCCCCEEEEeeCC------------CeEEEEECCCCceEEEEecc-cCCeEEEEEccCCCcEE
Q 022074 43 FSLKFSTDGRELVAGSSD------------DCIYVYDLEANKLSLRILAH-TSDVNTVCFGDESGHLI 97 (303)
Q Consensus 43 ~~l~~s~~g~~l~sgs~D------------g~v~lwd~~~~~~~~~~~~h-~~~v~~l~~~~~~~~~l 97 (303)
--|.|++.|+.+++-..+ +.+.+.+..++++...+..+ ...++.++|+|+...+|
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlf 546 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLF 546 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEE
T ss_pred cceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEE
Confidence 458999999855543221 23555566667655444443 35788888976533333
Done!