Query 022077
Match_columns 303
No_of_seqs 292 out of 2744
Neff 9.9
Searched_HMMs 13730
Date Mon Mar 25 13:40:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022077.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/022077hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1u1qa_ d.58.7.1 (A:) Nuclear 100.0 3.4E-34 2.5E-38 228.5 19.6 173 78-255 3-177 (183)
2 d1rk8a_ d.58.7.1 (A:) RNA-bind 99.9 8.3E-23 6.1E-27 141.5 11.6 84 171-255 5-88 (88)
3 d2cqba1 d.58.7.1 (A:1-89) Pept 99.9 5.1E-23 3.7E-27 143.0 9.9 85 172-257 4-88 (89)
4 d2cpza1 d.58.7.1 (A:383-484) C 99.9 2.8E-22 2.1E-26 142.7 12.9 88 169-257 14-101 (102)
5 d1b7fa1 d.58.7.1 (A:123-204) S 99.9 9.9E-23 7.2E-27 139.4 9.8 80 173-253 2-81 (82)
6 d2cq0a1 d.58.7.1 (A:231-320) E 99.9 1.4E-22 1E-26 141.0 10.6 85 170-255 5-89 (90)
7 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 99.9 4.6E-22 3.4E-26 139.1 12.6 84 171-255 5-88 (93)
8 d1fxla1 d.58.7.1 (A:37-118) Hu 99.9 3.9E-22 2.8E-26 136.5 11.8 80 173-253 2-81 (82)
9 d1x5ua1 d.58.7.1 (A:7-99) Spli 99.9 2.1E-22 1.5E-26 140.9 10.4 85 171-256 7-91 (93)
10 d1cvja1 d.58.7.1 (A:11-90) Pol 99.9 4.3E-22 3.1E-26 135.3 10.3 78 175-253 2-79 (80)
11 d1whwa_ d.58.7.1 (A:) Probable 99.9 7.7E-22 5.6E-26 139.8 11.2 86 171-257 6-91 (99)
12 d1u6fa1 d.58.7.1 (A:1-139) RNA 99.9 1.9E-21 1.4E-25 146.7 13.3 86 171-257 40-125 (139)
13 d2u2fa_ d.58.7.1 (A:) Splicing 99.9 5E-22 3.6E-26 136.5 8.9 81 174-255 2-82 (85)
14 d2cqca1 d.58.7.1 (A:109-191) A 99.9 1.7E-21 1.3E-25 133.4 11.2 78 170-248 6-83 (83)
15 d2cqga1 d.58.7.1 (A:96-185) TA 99.9 2E-21 1.4E-25 134.7 11.5 84 170-256 5-88 (90)
16 d1x5ta1 d.58.7.1 (A:8-90) Spli 99.9 8.9E-22 6.5E-26 134.9 9.6 81 176-257 1-82 (83)
17 d2cpha1 d.58.7.1 (A:454-547) P 99.9 1.3E-21 9.4E-26 137.1 10.4 85 171-256 6-92 (94)
18 d1x5sa1 d.58.7.1 (A:8-97) Cold 99.9 1.2E-21 8.8E-26 136.4 9.9 85 172-257 4-88 (90)
19 d1b7fa2 d.58.7.1 (A:205-289) S 99.9 2.1E-21 1.6E-25 133.5 11.1 80 171-251 4-85 (85)
20 d1fxla2 d.58.7.1 (A:119-203) H 99.9 2.6E-21 1.9E-25 132.9 11.3 82 79-160 4-85 (85)
21 d1fxla2 d.58.7.1 (A:119-203) H 99.9 2.1E-21 1.5E-25 133.4 10.8 78 173-251 6-85 (85)
22 d2ghpa1 d.58.7.1 (A:116-196) U 99.9 1.3E-21 9.8E-26 133.3 9.5 79 174-253 2-80 (81)
23 d2cq3a1 d.58.7.1 (A:110-202) R 99.8 6.5E-21 4.7E-25 133.2 12.7 86 168-256 6-91 (93)
24 d1p1ta_ d.58.7.1 (A:) Cleavage 99.8 2E-21 1.5E-25 139.0 10.2 84 173-257 8-91 (104)
25 d2cqia1 d.58.7.1 (A:1-90) Nucl 99.8 4.3E-21 3.1E-25 133.4 11.6 84 170-256 5-88 (90)
26 d1x5ua1 d.58.7.1 (A:7-99) Spli 99.8 4E-21 2.9E-25 134.3 11.2 84 78-163 6-89 (93)
27 d1b7fa2 d.58.7.1 (A:205-289) S 99.8 5.4E-21 3.9E-25 131.4 11.6 83 78-160 3-85 (85)
28 d1no8a_ d.58.7.1 (A:) Nuclear 99.8 3E-21 2.2E-25 130.4 9.5 77 175-253 2-78 (78)
29 d2cqda1 d.58.7.1 (A:1-103) RNA 99.8 4.5E-21 3.3E-25 136.6 10.9 85 171-257 8-92 (103)
30 d1uawa_ d.58.7.1 (A:) Musashi- 99.8 1.1E-21 8E-26 131.9 7.2 76 174-251 1-76 (77)
31 d2cpfa1 d.58.7.1 (A:362-446) P 99.8 5.8E-21 4.2E-25 131.4 10.6 78 176-254 1-81 (85)
32 d1rk8a_ d.58.7.1 (A:) RNA-bind 99.8 7.3E-21 5.3E-25 131.6 10.9 83 78-162 4-86 (88)
33 d1x4ba1 d.58.7.1 (A:8-110) Het 99.8 4.9E-21 3.6E-25 136.0 10.2 83 173-257 20-102 (103)
34 d1l3ka1 d.58.7.1 (A:8-91) Nucl 99.8 8.4E-21 6.1E-25 129.9 10.8 79 172-252 5-83 (84)
35 d1u6fa1 d.58.7.1 (A:1-139) RNA 99.8 5E-20 3.6E-24 138.8 15.9 83 79-163 40-122 (139)
36 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 99.8 1.2E-20 9.1E-25 131.7 11.5 83 79-163 5-87 (93)
37 d1cvja2 d.58.7.1 (A:91-179) Po 99.8 3.3E-21 2.4E-25 133.7 8.4 81 173-256 8-88 (89)
38 d1cvja1 d.58.7.1 (A:11-90) Pol 99.8 6.6E-21 4.8E-25 129.4 9.7 78 83-162 2-79 (80)
39 d1b7fa1 d.58.7.1 (A:123-204) S 99.8 5.9E-21 4.3E-25 130.4 9.5 80 81-162 2-81 (82)
40 d2cq4a1 d.58.7.1 (A:132-232) R 99.8 1.4E-21 1E-25 138.4 6.1 81 173-255 18-98 (101)
41 d2cq0a1 d.58.7.1 (A:231-320) E 99.8 1.6E-20 1.2E-24 130.4 10.3 82 79-162 6-87 (90)
42 d1hd0a_ d.58.7.1 (A:) Heteroge 99.8 9.7E-21 7E-25 126.8 8.2 75 175-251 1-75 (75)
43 d2cpza1 d.58.7.1 (A:383-484) C 99.8 4.4E-20 3.2E-24 131.2 12.1 82 80-163 17-98 (102)
44 d2cpxa1 d.58.7.1 (A:291-392) R 99.8 3.4E-21 2.5E-25 137.4 6.3 87 170-257 15-101 (102)
45 d1fxla1 d.58.7.1 (A:37-118) Hu 99.8 3.1E-20 2.3E-24 126.8 10.9 79 81-161 2-80 (82)
46 d1whwa_ d.58.7.1 (A:) Probable 99.8 4.2E-20 3E-24 130.7 11.9 85 79-165 6-90 (99)
47 d1x4ha1 d.58.7.1 (A:8-105) RNA 99.8 2.6E-20 1.9E-24 131.8 10.9 85 171-256 6-96 (98)
48 d2cqba1 d.58.7.1 (A:1-89) Pept 99.8 9.5E-21 6.9E-25 131.3 8.2 82 80-163 4-85 (89)
49 d2cpea1 d.58.7.1 (A:353-453) R 99.8 3.3E-20 2.4E-24 132.0 11.2 87 170-257 5-99 (101)
50 d2u2fa_ d.58.7.1 (A:) Splicing 99.8 2.3E-20 1.7E-24 128.1 9.8 80 82-163 2-81 (85)
51 d2cqca1 d.58.7.1 (A:109-191) A 99.8 3.3E-20 2.4E-24 126.9 10.3 78 78-157 6-83 (83)
52 d2ghpa3 d.58.7.1 (A:206-291) U 99.8 1.2E-20 8.4E-25 129.9 8.0 81 172-254 3-85 (86)
53 d1x4ga1 d.58.7.1 (A:8-103) Nuc 99.8 3E-20 2.2E-24 130.4 9.6 78 171-255 16-93 (96)
54 d1x5sa1 d.58.7.1 (A:8-97) Cold 99.8 4.5E-20 3.2E-24 128.3 10.2 84 79-164 3-86 (90)
55 d1l3ka2 d.58.7.1 (A:103-181) N 99.8 7.6E-20 5.5E-24 123.9 11.0 77 173-251 2-78 (79)
56 d1x4aa1 d.58.7.1 (A:9-103) Spl 99.8 6.6E-20 4.8E-24 128.6 10.6 83 170-256 11-93 (95)
57 d2msta_ d.58.7.1 (A:) Neural R 99.8 2.5E-20 1.9E-24 125.0 8.1 75 175-251 1-75 (75)
58 d1p1ta_ d.58.7.1 (A:) Cleavage 99.8 2.8E-20 2E-24 133.0 8.8 82 79-162 6-87 (104)
59 d2cpha1 d.58.7.1 (A:454-547) P 99.8 1E-19 7.4E-24 127.3 11.4 83 79-163 6-90 (94)
60 d1x0fa1 d.58.7.1 (A:183-257) N 99.8 9.6E-21 7E-25 126.4 5.6 75 175-251 1-75 (75)
61 d1fjeb1 d.58.7.1 (B:1-91) Nucl 99.8 1.2E-20 8.6E-25 131.2 5.7 82 170-254 10-91 (91)
62 d2b0ga1 d.58.7.1 (A:1-83) Spli 99.8 6.7E-20 4.9E-24 125.2 9.4 78 169-252 4-82 (83)
63 d1l3ka1 d.58.7.1 (A:8-91) Nucl 99.8 1E-19 7.4E-24 124.4 10.2 81 78-161 3-83 (84)
64 d2f9da1 d.58.7.1 (A:12-125) Pr 99.8 7E-20 5.1E-24 133.2 9.9 81 171-255 5-85 (114)
65 d2cqha1 d.58.7.1 (A:2-81) IGF- 99.8 6.3E-20 4.6E-24 124.3 8.6 77 174-257 2-79 (80)
66 d1uawa_ d.58.7.1 (A:) Musashi- 99.8 3.4E-20 2.4E-24 124.5 7.0 76 82-160 1-76 (77)
67 d2cpja1 d.58.7.1 (A:65-150) No 99.8 7.9E-20 5.7E-24 125.6 9.0 77 172-255 7-83 (86)
68 d2cqia1 d.58.7.1 (A:1-90) Nucl 99.8 2E-19 1.5E-23 124.8 11.0 82 78-163 5-86 (90)
69 d1x5oa1 d.58.7.1 (A:8-108) RNA 99.8 8.6E-20 6.2E-24 129.5 8.9 82 170-253 15-96 (101)
70 d1fjca_ d.58.7.1 (A:) Nucleoli 99.8 1.2E-19 8.5E-24 127.6 9.3 84 168-257 11-94 (96)
71 d2cqda1 d.58.7.1 (A:1-103) RNA 99.8 2.9E-19 2.1E-23 127.1 11.2 82 79-163 8-89 (103)
72 d1no8a_ d.58.7.1 (A:) Nuclear 99.8 1.5E-19 1.1E-23 121.9 9.1 76 83-161 2-77 (78)
73 d2cpda1 d.58.7.1 (A:223-308) A 99.8 4.7E-19 3.4E-23 121.9 11.9 78 172-256 7-84 (86)
74 d2cq4a1 d.58.7.1 (A:132-232) R 99.8 7.1E-20 5.2E-24 129.6 7.8 80 79-161 16-95 (101)
75 d1wi8a_ d.58.7.1 (A:) Eukaryot 99.8 2.3E-19 1.7E-23 128.1 10.5 85 170-257 12-97 (104)
76 d2adba1 d.58.7.1 (A:177-284) P 99.8 2.2E-19 1.6E-23 129.0 10.5 84 171-259 5-90 (108)
77 d1hd0a_ d.58.7.1 (A:) Heteroge 99.8 1.7E-19 1.2E-23 120.6 9.0 75 83-160 1-75 (75)
78 d1zh5a2 d.58.7.1 (A:105-189) L 99.8 3.4E-19 2.5E-23 122.1 10.7 77 173-252 6-82 (85)
79 d2cqpa1 d.58.7.1 (A:917-1002) 99.8 2.7E-19 1.9E-23 123.2 10.2 80 171-251 7-86 (86)
80 d2disa1 d.58.7.1 (A:8-103) Hyp 99.8 1.4E-19 1E-23 127.2 8.9 85 173-258 1-89 (96)
81 d2ghpa1 d.58.7.1 (A:116-196) U 99.8 1.1E-19 7.7E-24 123.7 8.0 78 82-161 2-79 (81)
82 d2adca2 d.58.7.1 (A:444-531) P 99.8 2.5E-19 1.8E-23 123.8 9.9 79 171-254 8-87 (88)
83 d2cqga1 d.58.7.1 (A:96-185) TA 99.8 4.5E-19 3.3E-23 122.6 11.2 81 79-163 6-86 (90)
84 d1wf2a_ d.58.7.1 (A:) Heteroge 99.8 2.4E-19 1.8E-23 126.1 9.6 78 170-256 12-90 (98)
85 d2cpfa1 d.58.7.1 (A:362-446) P 99.8 3.6E-19 2.6E-23 122.2 9.8 77 84-162 1-80 (85)
86 d2bz2a1 d.58.7.1 (A:35-113) Ne 99.8 2.6E-19 1.9E-23 121.0 8.8 74 172-254 4-77 (79)
87 d2adca1 d.58.7.1 (A:335-443) P 99.8 2.8E-19 2.1E-23 128.9 9.5 78 173-256 2-80 (109)
88 d1x5ta1 d.58.7.1 (A:8-90) Spli 99.8 2E-19 1.4E-23 123.0 8.0 78 84-163 1-79 (83)
89 d1x4ha1 d.58.7.1 (A:8-105) RNA 99.8 8.7E-19 6.3E-23 123.8 11.1 86 78-163 5-94 (98)
90 d2cpia1 d.58.7.1 (A:101-189) E 99.8 3.3E-19 2.4E-23 123.2 8.2 77 172-249 7-89 (89)
91 d1nu4a_ d.58.7.1 (A:) Spliceso 99.8 2.1E-19 1.5E-23 125.0 7.2 81 172-256 2-86 (91)
92 d1l3ka2 d.58.7.1 (A:103-181) N 99.8 9.1E-19 6.6E-23 118.5 9.9 77 81-160 2-78 (79)
93 d1x4ea1 d.58.7.1 (A:8-79) RNA- 99.8 1E-19 7.5E-24 120.9 5.0 71 176-247 1-71 (72)
94 d1wg5a_ d.58.7.1 (A:) Heteroge 99.8 1.2E-18 8.7E-23 124.2 10.5 88 168-257 10-97 (104)
95 d1x4ba1 d.58.7.1 (A:8-110) Het 99.8 5.7E-19 4.2E-23 125.2 8.7 82 79-163 18-99 (103)
96 d1whya_ d.58.7.1 (A:) Putative 99.8 1E-18 7.5E-23 122.9 9.8 80 170-256 14-95 (97)
97 d2cq1a1 d.58.7.1 (A:51-138) Po 99.8 1.2E-18 8.9E-23 120.3 10.0 81 168-255 3-85 (88)
98 d1x0fa1 d.58.7.1 (A:183-257) N 99.8 4.2E-19 3E-23 118.3 7.3 74 83-159 1-74 (75)
99 d2cq3a1 d.58.7.1 (A:110-202) R 99.8 3.2E-18 2.3E-22 119.3 12.1 82 78-163 8-89 (93)
100 d1weza_ d.58.7.1 (A:) Heteroge 99.8 1.1E-18 8.1E-23 123.9 9.5 86 168-257 10-95 (102)
101 d1wg1a_ d.58.7.1 (A:) Probable 99.8 1.2E-18 8.7E-23 120.1 9.3 78 172-257 4-81 (88)
102 d2msta_ d.58.7.1 (A:) Neural R 99.8 8E-19 5.8E-23 117.6 8.1 75 83-160 1-75 (75)
103 d3begb1 d.58.7.1 (B:121-207) S 99.8 3E-19 2.2E-23 123.0 5.7 76 174-257 1-76 (87)
104 d2f9da1 d.58.7.1 (A:12-125) Pr 99.8 2.6E-18 1.9E-22 124.7 10.5 104 79-200 5-108 (114)
105 d1whxa_ d.58.7.1 (A:) Probable 99.8 1.1E-18 8.3E-23 126.1 8.5 77 172-255 9-85 (111)
106 d2cpea1 d.58.7.1 (A:353-453) R 99.8 2.1E-18 1.5E-22 122.5 9.7 85 77-163 4-96 (101)
107 d2ghpa2 d.58.7.1 (A:41-115) U4 99.8 2.4E-18 1.8E-22 114.7 9.4 74 174-251 1-74 (75)
108 d1wexa_ d.58.7.1 (A:) Heteroge 99.8 7.4E-18 5.4E-22 120.0 12.4 83 168-257 10-94 (104)
109 d2disa1 d.58.7.1 (A:8-103) Hyp 99.7 2.3E-18 1.7E-22 120.8 9.6 82 82-163 2-85 (96)
110 d1wf0a_ d.58.7.1 (A:) TAR DNA- 99.7 6.3E-19 4.6E-23 121.7 6.4 79 171-257 3-81 (88)
111 d1x5oa1 d.58.7.1 (A:8-108) RNA 99.7 3.4E-18 2.5E-22 121.1 10.4 80 79-161 16-95 (101)
112 d1cvja2 d.58.7.1 (A:91-179) Po 99.7 1.3E-18 9.2E-23 120.4 7.9 79 81-163 8-86 (89)
113 d2ghpa3 d.58.7.1 (A:206-291) U 99.7 8.9E-19 6.5E-23 120.3 6.8 81 79-162 2-84 (86)
114 d1wg4a_ d.58.7.1 (A:) Splicing 99.7 3.8E-18 2.7E-22 119.9 9.4 79 171-257 13-91 (98)
115 d2cpya1 d.58.7.1 (A:536-638) R 99.7 2.4E-18 1.8E-22 122.5 8.1 84 171-256 6-89 (103)
116 d2cpxa1 d.58.7.1 (A:291-392) R 99.7 1E-18 7.3E-23 124.3 6.0 82 80-163 17-98 (102)
117 d1x4ga1 d.58.7.1 (A:8-103) Nuc 99.7 6.7E-18 4.9E-22 118.2 10.1 76 80-163 17-92 (96)
118 d1wi6a1 d.58.7.1 (A:69-143) Ri 99.7 4.2E-18 3.1E-22 113.5 8.6 72 176-255 1-72 (75)
119 d1fjeb1 d.58.7.1 (B:1-91) Nucl 99.7 4.9E-19 3.6E-23 122.8 4.0 82 77-162 9-90 (91)
120 d1zh5a2 d.58.7.1 (A:105-189) L 99.7 6E-18 4.4E-22 115.7 9.2 78 80-161 5-82 (85)
121 d1x4ea1 d.58.7.1 (A:8-79) RNA- 99.7 1.3E-18 9.4E-23 115.5 5.6 70 84-155 1-70 (72)
122 d2adba1 d.58.7.1 (A:177-284) P 99.7 1.1E-17 7.8E-22 120.0 10.9 83 79-165 5-87 (108)
123 d1x4fa1 d.58.7.1 (A:8-106) Mat 99.7 4.8E-18 3.5E-22 119.7 8.8 81 169-256 14-97 (99)
124 d2b0ga1 d.58.7.1 (A:1-83) Spli 99.7 1.2E-17 8.9E-22 113.8 10.6 76 80-161 7-82 (83)
125 d1x4aa1 d.58.7.1 (A:9-103) Spl 99.7 1.3E-17 9.4E-22 116.7 10.7 80 79-163 12-91 (95)
126 d1u1qa_ d.58.7.1 (A:) Nuclear 99.7 1.6E-17 1.2E-21 130.9 12.4 111 173-301 6-118 (183)
127 d1wi8a_ d.58.7.1 (A:) Eukaryot 99.7 2.8E-17 2.1E-21 117.0 11.5 81 80-164 14-95 (104)
128 d1whya_ d.58.7.1 (A:) Putative 99.7 5.2E-17 3.8E-21 114.0 12.5 78 80-163 16-93 (97)
129 d2cpia1 d.58.7.1 (A:101-189) E 99.7 3.7E-18 2.7E-22 117.9 6.2 77 80-158 7-89 (89)
130 d1x4da1 d.58.7.1 (A:8-96) Matr 99.7 1.2E-17 8.5E-22 115.2 8.7 80 169-255 4-86 (89)
131 d2cpja1 d.58.7.1 (A:65-150) No 99.7 1.9E-17 1.4E-21 113.4 9.6 77 80-164 7-83 (86)
132 d1wela1 d.58.7.1 (A:412-523) R 99.7 7.9E-18 5.8E-22 121.4 7.6 84 170-255 15-98 (112)
133 d1wg5a_ d.58.7.1 (A:) Heteroge 99.7 7.8E-17 5.7E-21 114.6 12.4 83 79-164 13-95 (104)
134 d2cqpa1 d.58.7.1 (A:917-1002) 99.7 1.2E-17 8.8E-22 114.7 7.8 79 80-160 8-86 (86)
135 d1wf2a_ d.58.7.1 (A:) Heteroge 99.7 4.3E-17 3.1E-21 114.4 10.5 75 79-163 13-88 (98)
136 d1fjca_ d.58.7.1 (A:) Nucleoli 99.7 1.5E-17 1.1E-21 116.6 8.0 81 77-164 12-92 (96)
137 d2adca2 d.58.7.1 (A:444-531) P 99.7 5.5E-17 4E-21 111.8 10.8 77 81-162 10-86 (88)
138 d1whxa_ d.58.7.1 (A:) Probable 99.7 2.8E-17 2E-21 118.6 9.7 77 79-163 8-84 (111)
139 d2adca1 d.58.7.1 (A:335-443) P 99.7 4.7E-17 3.4E-21 117.0 10.6 76 81-163 2-78 (109)
140 d1weza_ d.58.7.1 (A:) Heteroge 99.7 6.9E-17 5E-21 114.4 10.6 82 78-164 12-93 (102)
141 d1weya_ d.58.7.1 (A:) Calcipre 99.7 2.6E-17 1.9E-21 116.6 8.2 80 171-257 3-87 (104)
142 d2bz2a1 d.58.7.1 (A:35-113) Ne 99.7 6.1E-17 4.4E-21 109.1 9.4 75 79-163 3-77 (79)
143 d2ghpa2 d.58.7.1 (A:41-115) U4 99.7 5.9E-17 4.3E-21 107.9 8.9 74 82-160 1-74 (75)
144 d1nu4a_ d.58.7.1 (A:) Spliceso 99.7 2.7E-17 2E-21 114.1 7.0 79 80-163 2-84 (91)
145 d2cqha1 d.58.7.1 (A:2-81) IGF- 99.7 3.9E-17 2.9E-21 110.3 7.4 74 82-163 2-76 (80)
146 d2cpda1 d.58.7.1 (A:223-308) A 99.7 1.7E-16 1.2E-20 108.9 10.5 76 80-163 7-82 (86)
147 d3begb1 d.58.7.1 (B:121-207) S 99.7 3.6E-17 2.6E-21 112.4 6.6 71 82-161 1-71 (87)
148 d2cpya1 d.58.7.1 (A:536-638) R 99.7 4.2E-17 3.1E-21 115.9 6.2 80 79-161 6-85 (103)
149 d2cq1a1 d.58.7.1 (A:51-138) Po 99.7 1.7E-16 1.2E-20 109.3 8.7 80 78-163 5-84 (88)
150 d1jmta_ d.58.7.3 (A:) d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=3.4e-34 Score=228.49 Aligned_cols=173 Identities=20% Similarity=0.380 Sum_probs=149.5
Q ss_pred CCCcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEe
Q 022077 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRL 157 (303)
Q Consensus 78 ~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v 157 (303)
+...++|||||||+++|+++|+++|++||.|.++.++++..++.++|||||+|.+.++|.+|+.. .+..+ ..+.+.+
T Consensus 3 p~~~r~lfV~nLp~~~te~~L~~~F~~~G~v~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~-~~~~~--~~~~~~~ 79 (183)
T d1u1qa_ 3 PEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA-RPHKV--DGRVVEP 79 (183)
T ss_dssp CHHHHEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHT-CSCEE--TTEECEE
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHHHcCCEEEEEeeecccCCCccCceecccCCHHHHHHHHHh-cCCcc--cccchhh
Confidence 34568999999999999999999999999999999999999999999999999999999999975 44444 3444444
Q ss_pred eecCCC--CCCCCCCCCCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHH
Q 022077 158 NWASFG--AGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE 235 (303)
Q Consensus 158 ~~~~~~--~~~~~~~~~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 235 (303)
.+.... ..........++|||+||+..+++++|+++|+ .||.|..+.|+.+..+|.++|||||+|.+.++|.+|+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~i~V~~lp~~~te~~L~~~f~-~~G~v~~~~i~~~~~~~~~~g~~fV~f~~~e~A~~Al~- 157 (183)
T d1u1qa_ 80 KRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFE-QYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI- 157 (183)
T ss_dssp EECCCTTGGGSTTTTCCCSEEEEECCCTTCCHHHHHHHHG-GGSCEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHT-
T ss_pred hhhhhcccccccccccccceeEEccCCCcCCHHHHhhhhc-cCCceeeeeeecccccCccceeEEEEECCHHHHHHHHH-
Confidence 443322 22224456678999999999999999999998 99999999999999899999999999999999999997
Q ss_pred hCCceeCCeeeEEeecccCC
Q 022077 236 MNGVFCSTRPMRIGPATNKK 255 (303)
Q Consensus 236 l~g~~~~g~~l~v~~~~~~~ 255 (303)
+++..++|+.|+|.|+.+|.
T Consensus 158 ~~~~~~~G~~i~V~~A~~k~ 177 (183)
T d1u1qa_ 158 QKYHTVNGHNCEVRKALSKQ 177 (183)
T ss_dssp SSCEEETTEEEEEEECCCHH
T ss_pred hCCCeECCEEEEEEecCCcc
Confidence 68899999999999998764
No 2
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.89 E-value=8.3e-23 Score=141.50 Aligned_cols=84 Identities=24% Similarity=0.381 Sum_probs=79.6
Q ss_pred CCCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEee
Q 022077 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250 (303)
Q Consensus 171 ~~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~~ 250 (303)
..+.+|||+||+.++++++|+++|+ .||.|+++++++|+.+|+++|||||+|++.++|++|+..|||..+.|+.|+|+|
T Consensus 5 ~~~~~l~V~nL~~~~t~~~l~~~F~-~~G~i~~v~i~~d~~tg~~~g~afV~f~~~~~A~~A~~~lng~~l~g~~l~V~~ 83 (88)
T d1rk8a_ 5 VEGWILFVTSIHEEAQEDEIQEKFC-DYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQVDW 83 (88)
T ss_dssp C-CEEEEEESCCTTCCHHHHHHHHG-GGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHH-HcCCcccccccccccccccccceeEEECCHHHHHHHHHHcCCCEECCEEEEEEE
Confidence 4568999999999999999999998 999999999999999999999999999999999999999999999999999999
Q ss_pred cccCC
Q 022077 251 ATNKK 255 (303)
Q Consensus 251 ~~~~~ 255 (303)
+..++
T Consensus 84 a~~kG 88 (88)
T d1rk8a_ 84 CFVKG 88 (88)
T ss_dssp SEECC
T ss_pred ecCCC
Confidence 98763
No 3
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=5.1e-23 Score=142.99 Aligned_cols=85 Identities=24% Similarity=0.407 Sum_probs=80.6
Q ss_pred CCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEeec
Q 022077 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251 (303)
Q Consensus 172 ~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~~~ 251 (303)
..++|||+|||.++++++|+++|+ .||.|++++|+.|+.+|.++|||||+|.+.++|.+|+..|||..++|+.|+|.|+
T Consensus 4 ~~~tlfV~nLp~~~te~~l~~~F~-~~G~i~~v~i~~d~~~~~~kg~afV~f~~~~~A~~ai~~l~~~~i~g~~l~v~~a 82 (89)
T d2cqba1 4 TKRVLYVGGLAEEVDDKVLHAAFI-PFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLA 82 (89)
T ss_dssp CCSCEEEESCCSSCCHHHHHHHHT-TTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHHHTTEEETTEEEEEEEC
T ss_pred CCcEEEEeCCCCcCCHHHHHHHHh-hCCeEEecccccccccccccceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEe
Confidence 457999999999999999999998 9999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCC
Q 022077 252 TNKKTV 257 (303)
Q Consensus 252 ~~~~~~ 257 (303)
++++.+
T Consensus 83 ~p~~~k 88 (89)
T d2cqba1 83 KPMRIK 88 (89)
T ss_dssp CCCCCC
T ss_pred CCCCCC
Confidence 877644
No 4
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=2.8e-22 Score=142.71 Aligned_cols=88 Identities=23% Similarity=0.390 Sum_probs=82.8
Q ss_pred CCCCCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEE
Q 022077 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI 248 (303)
Q Consensus 169 ~~~~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v 248 (303)
...++++|||+|||.++++++|+++|+ .||.|.+++++.+..+|.++|||||+|.+.++|.+|++.|||..|+|+.|+|
T Consensus 14 ~~p~~~~l~V~nLp~~~te~~l~~~F~-~~G~i~~~~~~~~~~~g~~kG~afV~f~~~~~A~~Ai~~lng~~~~g~~i~V 92 (102)
T d2cpza1 14 EGPEGANLFIYHLPQEFGDQDLLQMFM-PFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKV 92 (102)
T ss_dssp CCSTTCCEEEESCCSSCCHHHHHHHHG-GGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHTTCEETTEECEE
T ss_pred CCCCCCEEEEeCCCCCCCHHHHHHHHH-hhccccccceeeecccCCCccceEEEeCCHHHHHHHHHHhCCCEECCEEEEE
Confidence 345678899999999999999999998 9999999999999999999999999999999999999999999999999999
Q ss_pred eecccCCCC
Q 022077 249 GPATNKKTV 257 (303)
Q Consensus 249 ~~~~~~~~~ 257 (303)
+|++++.++
T Consensus 93 ~~a~~k~~~ 101 (102)
T d2cpza1 93 QLKRSKNDS 101 (102)
T ss_dssp ECCCCSCCC
T ss_pred EEeCCCCCC
Confidence 999988754
No 5
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.88 E-value=9.9e-23 Score=139.44 Aligned_cols=80 Identities=28% Similarity=0.457 Sum_probs=77.2
Q ss_pred CceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEeecc
Q 022077 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252 (303)
Q Consensus 173 ~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~~~~ 252 (303)
+++|||+|||.++++++|+++|+ +||.|+++++.+++.+|+++|||||+|++.++|.+|++.|||..++|+.|+|.|++
T Consensus 2 ~t~l~V~nLp~~~t~~~l~~~F~-~~G~v~~~~i~~~~~~g~~~g~afV~f~~~~~A~~ai~~lng~~~~g~~l~v~~a~ 80 (82)
T d1b7fa1 2 NTNLIVNYLPQDMTDRELYALFR-AIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYAR 80 (82)
T ss_dssp CSEEEEECCCTTCCHHHHHHHHH-TTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHH-HhCCcceeeeeeecccCCccccceEEECCHHHHHHHHHHhCCCEECCEEEEEEEcC
Confidence 46899999999999999999998 99999999999999899999999999999999999999999999999999999997
Q ss_pred c
Q 022077 253 N 253 (303)
Q Consensus 253 ~ 253 (303)
+
T Consensus 81 p 81 (82)
T d1b7fa1 81 P 81 (82)
T ss_dssp C
T ss_pred C
Confidence 5
No 6
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=1.4e-22 Score=141.04 Aligned_cols=85 Identities=26% Similarity=0.384 Sum_probs=80.5
Q ss_pred CCCCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEe
Q 022077 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249 (303)
Q Consensus 170 ~~~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~ 249 (303)
....++|||+||+.++++++|+++|+ .||.|.+++|+.+..+|.++|||||+|.+.++|.+|++.|||..++|+.|+|.
T Consensus 5 ~~~~~~i~V~nLp~~~t~~~l~~~f~-~~G~v~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~v~ 83 (90)
T d2cq0a1 5 ADDNATIRVTNLSEDTRETDLQELFR-PFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVE 83 (90)
T ss_dssp CSSSEEEEEESCCTTCCHHHHHTTST-TTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHHTTTCEETTEECEEE
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHH-HhcccccccccccccccccccceeEEECCHHHHHHHHHHhCCCEECCEEEEEE
Confidence 34567999999999999999999998 99999999999999899999999999999999999999999999999999999
Q ss_pred ecccCC
Q 022077 250 PATNKK 255 (303)
Q Consensus 250 ~~~~~~ 255 (303)
|++++.
T Consensus 84 ~akp~~ 89 (90)
T d2cq0a1 84 WAKPST 89 (90)
T ss_dssp ESSCCC
T ss_pred eeeCCC
Confidence 998764
No 7
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=4.6e-22 Score=139.10 Aligned_cols=84 Identities=23% Similarity=0.318 Sum_probs=79.8
Q ss_pred CCCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEee
Q 022077 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250 (303)
Q Consensus 171 ~~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~~ 250 (303)
..+++|||+|||.++++++|+++|+ .||.|.+|+++.++.++.++|||||+|.+.++|.+|++.|||..++|+.|+|.|
T Consensus 5 ~~s~tlfV~nlp~~~te~~l~~~F~-~~G~i~~v~i~~~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V~~ 83 (93)
T d1h2vz_ 5 KKSCTLYVGNLSFYTTEEQIYELFS-KSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDW 83 (93)
T ss_dssp TTCCEEEEESCCTTCCHHHHHHHHG-GGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTSEETTEECEEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHH-HHCCcceeccccccccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEE
Confidence 4578999999999999999999998 999999999999999999999999999999999999999999999999999999
Q ss_pred cccCC
Q 022077 251 ATNKK 255 (303)
Q Consensus 251 ~~~~~ 255 (303)
+...+
T Consensus 84 a~~~~ 88 (93)
T d1h2vz_ 84 DAGFK 88 (93)
T ss_dssp ESCCC
T ss_pred cCCCC
Confidence 87654
No 8
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=3.9e-22 Score=136.48 Aligned_cols=80 Identities=25% Similarity=0.471 Sum_probs=76.9
Q ss_pred CceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEeecc
Q 022077 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252 (303)
Q Consensus 173 ~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~~~~ 252 (303)
.++|||+|||.++++++|+++|+ +||.|.+++++++..+|.++|||||+|.+.++|++|++.|||..++|+.|+|.|++
T Consensus 2 ~t~l~V~nLp~~~te~~l~~~f~-~~G~v~~v~i~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~g~~l~v~~Ak 80 (82)
T d1fxla1 2 KTNLIVNYLPQNMTQEEFRSLFG-SIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYAR 80 (82)
T ss_dssp CSEEEEESCCTTCCHHHHHHHHH-TTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECC
T ss_pred CCEEEEECCCCCCCHHHHHHHHH-HhCCcccccceeeccCCCceeeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEee
Confidence 35799999999999999999998 99999999999999899999999999999999999999999999999999999997
Q ss_pred c
Q 022077 253 N 253 (303)
Q Consensus 253 ~ 253 (303)
+
T Consensus 81 P 81 (82)
T d1fxla1 81 P 81 (82)
T ss_dssp C
T ss_pred C
Confidence 6
No 9
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=2.1e-22 Score=140.90 Aligned_cols=85 Identities=29% Similarity=0.491 Sum_probs=80.6
Q ss_pred CCCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEee
Q 022077 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250 (303)
Q Consensus 171 ~~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~~ 250 (303)
...++|||+|||.++++++|+++|+ +||.|++++|++++.+|.++|||||+|.+.++|.+|++.|||..++|+.|+|+|
T Consensus 7 ~~~~tlfV~nLp~~~t~~~l~~~F~-~~G~v~~v~~~~d~~tg~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~ 85 (93)
T d1x5ua1 7 NQDATVYVGGLDEKVSEPLLWELFL-QAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYGKPIRVNK 85 (93)
T ss_dssp CTTTEEEEECCCTTCCHHHHHHHHH-TTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSSSCBCSSCBCEEEE
T ss_pred CCCCEEEEeCCCCcCCHHHHHHHHH-HhCCccccceeecccccccccceEEEECCHHHHHHHHHHcCCCEECCEEEEEEE
Confidence 4457999999999999999999998 999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCC
Q 022077 251 ATNKKT 256 (303)
Q Consensus 251 ~~~~~~ 256 (303)
++++..
T Consensus 86 A~~~~~ 91 (93)
T d1x5ua1 86 ASAHNK 91 (93)
T ss_dssp TTTTSC
T ss_pred cCCCCC
Confidence 988753
No 10
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=4.3e-22 Score=135.35 Aligned_cols=78 Identities=33% Similarity=0.495 Sum_probs=75.5
Q ss_pred eEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEeeccc
Q 022077 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253 (303)
Q Consensus 175 ~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~~~~~ 253 (303)
.|||+||+.++++++|+++|+ .||.|.+++|++++.+|+++|||||+|.+.++|.+|++.|||..++|+.|+|.|++.
T Consensus 2 slfV~nL~~~~te~~l~~~F~-~~G~i~~v~i~~d~~tg~~~g~aFV~f~~~~~a~~ai~~l~g~~~~gr~i~v~~a~~ 79 (80)
T d1cvja1 2 SLYVGDLHPDVTEAMLYEKFS-PAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQR 79 (80)
T ss_dssp EEEEESCCTTCCHHHHHHHHG-GGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHTTSTTCEETTEECEEEECCC
T ss_pred EEEEeCCCCcCCHHHHHHHHH-HhCCEeEEEEEecccccCCCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeCC
Confidence 699999999999999999998 999999999999999999999999999999999999999999999999999999853
No 11
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.86 E-value=7.7e-22 Score=139.83 Aligned_cols=86 Identities=27% Similarity=0.408 Sum_probs=81.2
Q ss_pred CCCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEee
Q 022077 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250 (303)
Q Consensus 171 ~~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~~ 250 (303)
...++|||+||+.++++++|+++|+ +||.|++++|+.|+.+++++|||||+|++.++|.+|++.|||..|+|+.|+|.+
T Consensus 6 ~~~~~lfV~nL~~~~t~~~l~~~F~-~~g~v~~v~i~~d~~tg~~~g~afV~f~~~~~a~~A~~~l~g~~~~gr~i~V~~ 84 (99)
T d1whwa_ 6 SGSGRLFVRNLSYTSSEEDLEKLFS-AYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLP 84 (99)
T ss_dssp CSCEEEEEECCCTTCCHHHHHHHHH-TTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHHTTTEESSSCEEEEEE
T ss_pred CCCCEEEEECCCCcCCHHHHHHHHH-hcCCceeeeecccccccccCcceEEEECCHHHHHHHHHHcCCCEECCEEEEEEE
Confidence 4467899999999999999999998 999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCC
Q 022077 251 ATNKKTV 257 (303)
Q Consensus 251 ~~~~~~~ 257 (303)
++.+...
T Consensus 85 a~~~~~~ 91 (99)
T d1whwa_ 85 STIKKEA 91 (99)
T ss_dssp CCCCSTT
T ss_pred CCCCCcc
Confidence 9987654
No 12
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=99.86 E-value=1.9e-21 Score=146.66 Aligned_cols=86 Identities=26% Similarity=0.468 Sum_probs=81.0
Q ss_pred CCCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEee
Q 022077 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250 (303)
Q Consensus 171 ~~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~~ 250 (303)
...++|||+||+.++++++|+++|+ .||.|++|+|++++.+|+++|||||+|.+.++|.+|++.|||..|+|+.|+|.|
T Consensus 40 ~~~~~l~V~nLp~~~te~~l~~~F~-~~G~i~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~lng~~~~gr~l~V~~ 118 (139)
T d1u6fa1 40 DVLRNLMVNYIPTTVDEVQLRQLFE-RYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNILNKRLKVAL 118 (139)
T ss_dssp TTTSEEEEESCSTTCCHHHHHHHHH-HHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHTTTEECSSCEEEEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHH-hhccccccccccccccccccceeeEEECCHHHHHHHHHHhCCCEECCEEEEEEE
Confidence 4457899999999999999999998 999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCC
Q 022077 251 ATNKKTV 257 (303)
Q Consensus 251 ~~~~~~~ 257 (303)
++.+..+
T Consensus 119 a~~~~~~ 125 (139)
T d1u6fa1 119 AASGHQR 125 (139)
T ss_dssp SSCCCCC
T ss_pred cCCCCCC
Confidence 9877654
No 13
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=5e-22 Score=136.53 Aligned_cols=81 Identities=25% Similarity=0.423 Sum_probs=77.7
Q ss_pred ceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEeeccc
Q 022077 174 HTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253 (303)
Q Consensus 174 ~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~~~~~ 253 (303)
.+|||+|||.++++++|+++|+ .||.|++++|++|+.+|+++|||||+|.+.++|.+|+..|||..++|+.|+|.|++.
T Consensus 2 ~rlfV~nlp~~~te~~l~~~F~-~~G~v~~v~i~~d~~tg~~rg~aFV~f~~~~~A~~a~~~l~~~~l~g~~l~V~~A~~ 80 (85)
T d2u2fa_ 2 HKLFIGGLPNYLNDDQVKELLT-SFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASV 80 (85)
T ss_dssp CCEEEETCCSSCCSHHHHHHHT-SSSCEEEEEEECCCSSSCCCCEEEEEESSSHHHHHHHHTSSSCCCSSSCCEEEECCC
T ss_pred CEEEEECCCCCCCHHHHHHHHH-hcCccceEEeeccccccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 4799999999999999999998 999999999999999999999999999999999999999999999999999999986
Q ss_pred CC
Q 022077 254 KK 255 (303)
Q Consensus 254 ~~ 255 (303)
..
T Consensus 81 ~~ 82 (85)
T d2u2fa_ 81 GA 82 (85)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 14
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=1.7e-21 Score=133.38 Aligned_cols=78 Identities=26% Similarity=0.421 Sum_probs=74.4
Q ss_pred CCCCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEE
Q 022077 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI 248 (303)
Q Consensus 170 ~~~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v 248 (303)
..++++|||+||+.++++++|+++|+ +||.|.+++|++++.+++++|||||+|.+.++|.+|+..|||..++|+.|+|
T Consensus 6 p~~~~~l~V~nL~~~~te~~l~~~F~-~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V 83 (83)
T d2cqca1 6 PDPNCCLGVFGLSLYTTERDLREVFS-KYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRV 83 (83)
T ss_dssp CCGGGCEEEESCCSSCCHHHHHHHHH-TTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHH-HhCCCccccccccccccccccceEEEECCHHHHHHHHHHcCCCEECCEEeEC
Confidence 34568999999999999999999998 9999999999999989999999999999999999999999999999999987
No 15
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=2e-21 Score=134.70 Aligned_cols=84 Identities=25% Similarity=0.326 Sum_probs=77.4
Q ss_pred CCCCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEe
Q 022077 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249 (303)
Q Consensus 170 ~~~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~ 249 (303)
....++|||+|||+++++++|+++|+ .||.|.+|+|++|+.+|+++|||||+|.+.++|.+|++. +..|+|+.|+|+
T Consensus 5 ~~~~~~lfV~nLp~~~te~~l~~~F~-~~G~i~~v~i~~d~~tg~srG~aFV~f~~~~~a~~al~~--~~~l~Gr~i~v~ 81 (90)
T d2cqga1 5 VQKTSDLIVLGLPWKTTEQDLKEYFS-TFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQ--RHMIDGRWCDCK 81 (90)
T ss_dssp CCCCCCEEEESCCSSCCHHHHHHHHG-GGSCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHS--CEEETTEEEEEE
T ss_pred CcCCCeEEEECCCCCCCHHHHHHHHH-hhcccceeeeccCCCCcccCCEEEEEECCHHHHHHHHhc--CCccCCEEeEEE
Confidence 34567899999999999999999998 999999999999999999999999999999999999984 458999999999
Q ss_pred ecccCCC
Q 022077 250 PATNKKT 256 (303)
Q Consensus 250 ~~~~~~~ 256 (303)
++.+++.
T Consensus 82 ~a~~k~~ 88 (90)
T d2cqga1 82 LPNSKQS 88 (90)
T ss_dssp CCCTTCC
T ss_pred eCCCCCC
Confidence 9988764
No 16
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=8.9e-22 Score=134.89 Aligned_cols=81 Identities=30% Similarity=0.559 Sum_probs=76.1
Q ss_pred EEEcCCCcccCHHHHHHHHhhhCCCcceE-EEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEeecccC
Q 022077 176 IFVGDLAADVTDYMLQETFRARYPSTKGA-KVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNK 254 (303)
Q Consensus 176 l~v~nl~~~~~~~~l~~~f~~~~G~i~~~-~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~~~~~~ 254 (303)
|||+||+.++++++|+++|+ .||.|.++ +|+++..+|+++|||||+|++.++|.+|++.|||..++|+.|+|.|+.++
T Consensus 1 lfV~nLp~~~te~~l~~~F~-~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~g~~~~gr~l~v~~a~~k 79 (83)
T d1x5ta1 1 IFIGNLDPEIDEKLLYDTFS-AFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKK 79 (83)
T ss_dssp EEEECCCTTCCHHHHHHHHH-TTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHTTTTCEETTEECEEEESCCC
T ss_pred CEEcCCCCcCcHHHHHHHHH-HhCceeeeEEEEeeccccccCceEEEEECCHHHHHHHHHhCCCcEECCEEEEEEEecCC
Confidence 79999999999999999998 99999764 78899889999999999999999999999999999999999999999987
Q ss_pred CCC
Q 022077 255 KTV 257 (303)
Q Consensus 255 ~~~ 257 (303)
..+
T Consensus 80 ~~k 82 (83)
T d1x5ta1 80 DSK 82 (83)
T ss_dssp CCC
T ss_pred CcC
Confidence 654
No 17
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.86 E-value=1.3e-21 Score=137.08 Aligned_cols=85 Identities=19% Similarity=0.316 Sum_probs=78.5
Q ss_pred CCCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeC-CCCCceeEEEEEeCCHHHHHHHHHHh-CCceeCCeeeEE
Q 022077 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDR-LTGRTKGYGFVRFGDESEQLRAMTEM-NGVFCSTRPMRI 248 (303)
Q Consensus 171 ~~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~-~~~~~~g~afV~f~~~~~A~~A~~~l-~g~~~~g~~l~v 248 (303)
..+++|||+|||.++++++|+++|+ .||.|.+++|+++. .+|+++|||||+|.+.++|.+|+..| ||..++|+.|+|
T Consensus 6 ~~~~~l~V~nLp~~~~e~~l~~~F~-~~G~i~~v~i~~~~~~~g~~rg~afV~f~~~~~A~~Ai~~l~~~~~~~Gr~l~V 84 (94)
T d2cpha1 6 QTTSKILVRNIPFQANQREIRELFS-TFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLVL 84 (94)
T ss_dssp SCCCCEEEESCCTTCCHHHHHHHHH-TTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSSSCBCEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHH-HhCCceEEEEEeccccCCCcccEEEEEECCHHHHHHHHHHccCCcEECCEEEEE
Confidence 4567899999999999999999998 99999999998875 37899999999999999999999998 899999999999
Q ss_pred eecccCCC
Q 022077 249 GPATNKKT 256 (303)
Q Consensus 249 ~~~~~~~~ 256 (303)
.|++.+..
T Consensus 85 ~~A~~~~~ 92 (94)
T d2cpha1 85 EWADSEVT 92 (94)
T ss_dssp EECCCCCC
T ss_pred EEcCCCCC
Confidence 99987754
No 18
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=1.2e-21 Score=136.37 Aligned_cols=85 Identities=32% Similarity=0.533 Sum_probs=80.1
Q ss_pred CCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEeec
Q 022077 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251 (303)
Q Consensus 172 ~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~~~ 251 (303)
..++|||+|||.++++++|+++|+ .||.|..+.++.+..++.++|||||+|.+.++|.+|+..|||..|+|+.|+|.|+
T Consensus 4 ~~~kifV~nLp~~~t~~~l~~~F~-~~G~i~~~~~~~~~~~~~~~g~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~a 82 (90)
T d1x5sa1 4 DEGKLFVGGLSFDTNEQSLEQVFS-KYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQA 82 (90)
T ss_dssp CCSEEEEESCCTTCCHHHHHHHHH-HHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCCTTSCCCEEEEE
T ss_pred CCCEEEEECCCCcCCHHHHHHhhh-ccccccceeeccccccccccceEEEEECCHHHHHHHHHHcCCCEECCEEEEEEEc
Confidence 457899999999999999999998 9999999999999889999999999999999999999999999999999999999
Q ss_pred ccCCCC
Q 022077 252 TNKKTV 257 (303)
Q Consensus 252 ~~~~~~ 257 (303)
..+...
T Consensus 83 ~~~~~~ 88 (90)
T d1x5sa1 83 GKSSDN 88 (90)
T ss_dssp ECCCCC
T ss_pred CCCCCC
Confidence 877644
No 19
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.85 E-value=2.1e-21 Score=133.48 Aligned_cols=80 Identities=30% Similarity=0.554 Sum_probs=75.3
Q ss_pred CCCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCC--eeeEE
Q 022077 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCST--RPMRI 248 (303)
Q Consensus 171 ~~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g--~~l~v 248 (303)
...++|||+|||.++++++|+++|+ +||.|.++++++++.+|+++|||||+|++.++|.+|++.|||..+.| +.|+|
T Consensus 4 ~~~t~lfV~nlp~~~te~~l~~~F~-~~G~i~~~~~~~d~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~~~l~V 82 (85)
T d1b7fa2 4 IKDTNLYVTNLPRTITDDQLDTIFG-KYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSV 82 (85)
T ss_dssp TTTCEEEEESCCTTCCHHHHHHHHT-SSSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHH-hhCCEeeeeeecccccccCceeEEEEECCHHHHHHHHHHHCCCEeCCCCeEEEE
Confidence 3456799999999999999999998 99999999999999999999999999999999999999999999876 88999
Q ss_pred eec
Q 022077 249 GPA 251 (303)
Q Consensus 249 ~~~ 251 (303)
+||
T Consensus 83 ~~A 85 (85)
T d1b7fa2 83 RLA 85 (85)
T ss_dssp EEC
T ss_pred EEC
Confidence 996
No 20
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=2.6e-21 Score=132.95 Aligned_cols=82 Identities=23% Similarity=0.425 Sum_probs=77.6
Q ss_pred CCcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEee
Q 022077 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLN 158 (303)
Q Consensus 79 ~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~ 158 (303)
...++|||+|||.++|+++|+++|++||.|.++++++++.+|+++|||||+|.+.++|.+|++.|||..+.|+.+.|+|.
T Consensus 4 ~k~~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~i~~d~~~g~~kg~afV~f~~~~~a~~Ai~~lng~~~~G~~~~i~V~ 83 (85)
T d1fxla2 4 IRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVK 83 (85)
T ss_dssp GTTCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHhCCccccccccccccccCCCeeEEEEcCHHHHHHHHHHhCCCEeCCCCEEEEEE
Confidence 35578999999999999999999999999999999999989999999999999999999999999999998888889999
Q ss_pred ec
Q 022077 159 WA 160 (303)
Q Consensus 159 ~~ 160 (303)
||
T Consensus 84 ~A 85 (85)
T d1fxla2 84 FA 85 (85)
T ss_dssp EC
T ss_pred eC
Confidence 86
No 21
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=2.1e-21 Score=133.41 Aligned_cols=78 Identities=28% Similarity=0.532 Sum_probs=73.9
Q ss_pred CceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCC--eeeEEee
Q 022077 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCST--RPMRIGP 250 (303)
Q Consensus 173 ~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g--~~l~v~~ 250 (303)
.++|||+|||.++++++|+++|+ +||.|++++|++|+.+|.++|||||+|.+.++|.+|++.|||..+.| +.|+|+|
T Consensus 6 ~~~lfV~nLp~~~te~~L~~~F~-~~G~v~~v~i~~d~~~g~~kg~afV~f~~~~~a~~Ai~~lng~~~~G~~~~i~V~~ 84 (85)
T d1fxla2 6 DANLYVSGLPKTMTQKELEQLFS-QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKF 84 (85)
T ss_dssp TCEEEEESCCTTCCHHHHHHHHG-GGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEEE
T ss_pred CCEEEEeCCCCCCCHHHHHHHHH-HhCCccccccccccccccCCCeeEEEEcCHHHHHHHHHHhCCCEeCCCCEEEEEEe
Confidence 56899999999999999999998 99999999999999899999999999999999999999999999987 5599998
Q ss_pred c
Q 022077 251 A 251 (303)
Q Consensus 251 ~ 251 (303)
|
T Consensus 85 A 85 (85)
T d1fxla2 85 A 85 (85)
T ss_dssp C
T ss_pred C
Confidence 6
No 22
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.85 E-value=1.3e-21 Score=133.34 Aligned_cols=79 Identities=5% Similarity=0.124 Sum_probs=69.7
Q ss_pred ceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEeeccc
Q 022077 174 HTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253 (303)
Q Consensus 174 ~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~~~~~ 253 (303)
++|||+|||.++++++|+++|+ .||.|..+.++.+..+|+++|||||+|.+.++|.+|++.|||..++|+.|+|+|+++
T Consensus 2 ~tl~v~nLp~~~t~~~l~~~f~-~~G~v~~~~~~~~~~~~~~~g~afV~f~~~e~A~~Ai~~l~g~~~~g~~i~V~~a~P 80 (81)
T d2ghpa1 2 CTLWMTNFPPSYTQRNIRDLLQ-DINVVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCVEKLNGLKIEGYTLVTKVSNP 80 (81)
T ss_dssp CEEEEECCCTTCCHHHHHHHHH-HTTCCCCEEECC-------CCEEEEECSSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred cEEEEECCCCcCCHHHHHHHHH-HhCcEEeeeeecccccccccceeEEEECCHHHHHHHHHHhCCCEECCEEEEEEEccC
Confidence 6899999999999999999998 999999999988888899999999999999999999999999999999999999975
No 23
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=6.5e-21 Score=133.24 Aligned_cols=86 Identities=19% Similarity=0.415 Sum_probs=78.6
Q ss_pred CCCCCCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeE
Q 022077 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMR 247 (303)
Q Consensus 168 ~~~~~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~ 247 (303)
......++|||+|||.++++++|+++|+ .||.|++|+++.+. +.++|||||+|.+.++|.+|+..|||..++|+.|+
T Consensus 6 ~~~~~~~~l~v~nLp~~~t~~~L~~~F~-~~G~v~~v~~~~~~--~~~kg~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~ 82 (93)
T d2cq3a1 6 ESKSTPKRLHVSNIPFRFRDPDLRQMFG-QFGKILDVEIIFNE--RGSKGFGFVTFENSADADRAREKLHGTVVEGRKIE 82 (93)
T ss_dssp CCSCCCCEEEEESCCTTCCHHHHHHHGG-GTSCEEEEEEECCT--TTTCCEEEEEESCHHHHHHHHHHHTTCEETTEECE
T ss_pred CCCCCCCEEEEECCCCCCCHHHHHHHHh-hcceeeeccccccc--cCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEE
Confidence 4455677899999999999999999998 99999999999885 44689999999999999999999999999999999
Q ss_pred EeecccCCC
Q 022077 248 IGPATNKKT 256 (303)
Q Consensus 248 v~~~~~~~~ 256 (303)
|.|++++..
T Consensus 83 V~~A~~r~~ 91 (93)
T d2cq3a1 83 VNNATARVM 91 (93)
T ss_dssp EEECCSSCC
T ss_pred EEecCcCCC
Confidence 999998754
No 24
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=2e-21 Score=138.97 Aligned_cols=84 Identities=32% Similarity=0.568 Sum_probs=79.4
Q ss_pred CceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEeecc
Q 022077 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252 (303)
Q Consensus 173 ~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~~~~ 252 (303)
.++|||+||+.++++++|+++|+ .||.|.+|+|++++.+|+++|||||+|.+.++|.+|++.|||..|+|+.|+|.|+.
T Consensus 8 ~rtl~V~nLp~~~te~~l~~~f~-~~G~i~~v~i~~~~~tg~~~g~afV~f~~~~~a~~ai~~l~~~~~~g~~i~V~~a~ 86 (104)
T d1p1ta_ 8 LRSVFVGNIPYEATEEQLKDIFS-EVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAA 86 (104)
T ss_dssp HSCEEEESCCTTSCHHHHHHHHH-TTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHHSSSBSCSSSCBEEEETT
T ss_pred CCEEEEECCCCcCCHHHHHHhhh-ccccccccccccccceeccCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEECC
Confidence 46899999999999999999998 99999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCC
Q 022077 253 NKKTV 257 (303)
Q Consensus 253 ~~~~~ 257 (303)
.+...
T Consensus 87 ~~~~~ 91 (104)
T d1p1ta_ 87 SEKNK 91 (104)
T ss_dssp CTTHH
T ss_pred CCCCc
Confidence 76543
No 25
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=4.3e-21 Score=133.40 Aligned_cols=84 Identities=25% Similarity=0.448 Sum_probs=76.6
Q ss_pred CCCCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEe
Q 022077 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249 (303)
Q Consensus 170 ~~~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~ 249 (303)
....++|||+|||.++++++|+++|+ .||.|+++++..+..++ +|||||+|.+.++|.+|+..|||..+.|+.|+|.
T Consensus 5 ~~~~~tl~V~nLp~~~te~~l~~~F~-~~G~i~~v~i~~d~~~~--~~~afV~f~~~~~A~~A~~~l~~~~~~g~~i~v~ 81 (90)
T d2cqia1 5 DGQPRTLYVGNLSRDVTEVLILQLFS-QIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVN 81 (90)
T ss_dssp SCCCCEEEEESCCTTCCHHHHHHHHH-HHSCEEEEEEECCCCSS--CCEEEEEESSHHHHHHHHHHHTTEEETTEEEEEE
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHH-hcCCceeeeeecccCcc--ceeeEEEECCHHHHHHHHHHcCCCEECCEEEEEE
Confidence 34567999999999999999999998 99999999999986443 7899999999999999999999999999999999
Q ss_pred ecccCCC
Q 022077 250 PATNKKT 256 (303)
Q Consensus 250 ~~~~~~~ 256 (303)
|++.+..
T Consensus 82 ~a~~~~~ 88 (90)
T d2cqia1 82 WATTPSS 88 (90)
T ss_dssp ECCCTTC
T ss_pred EcCCCCC
Confidence 9987653
No 26
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=4e-21 Score=134.26 Aligned_cols=84 Identities=29% Similarity=0.462 Sum_probs=78.8
Q ss_pred CCCcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEe
Q 022077 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRL 157 (303)
Q Consensus 78 ~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v 157 (303)
....++|||+|||.++|+++|+++|++||.|.++++++++.+|+++|||||+|.+.++|.+|++.|+|..+ .++.|+|
T Consensus 6 ~~~~~tlfV~nLp~~~t~~~l~~~F~~~G~v~~v~~~~d~~tg~~kg~afV~f~~~~~A~~Ai~~l~g~~~--~g~~l~V 83 (93)
T d1x5ua1 6 RNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKL--YGKPIRV 83 (93)
T ss_dssp CCTTTEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSSSCBC--SSCBCEE
T ss_pred CCCCCEEEEeCCCCcCCHHHHHHHHHHhCCccccceeecccccccccceEEEECCHHHHHHHHHHcCCCEE--CCEEEEE
Confidence 34568999999999999999999999999999999999999999999999999999999999999999999 7899999
Q ss_pred eecCCC
Q 022077 158 NWASFG 163 (303)
Q Consensus 158 ~~~~~~ 163 (303)
.|+...
T Consensus 84 ~~A~~~ 89 (93)
T d1x5ua1 84 NKASAH 89 (93)
T ss_dssp EETTTT
T ss_pred EEcCCC
Confidence 999754
No 27
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.85 E-value=5.4e-21 Score=131.43 Aligned_cols=83 Identities=23% Similarity=0.415 Sum_probs=78.1
Q ss_pred CCCcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEe
Q 022077 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRL 157 (303)
Q Consensus 78 ~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v 157 (303)
....++|||+|||.++|+++|+++|++||.|.++++++++.+|+++|||||+|.+.++|.+|++.|||..+.+.++.|+|
T Consensus 3 ~~~~t~lfV~nlp~~~te~~l~~~F~~~G~i~~~~~~~d~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~~~l~V 82 (85)
T d1b7fa2 3 SIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSV 82 (85)
T ss_dssp TTTTCEEEEESCCTTCCHHHHHHHHTSSSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHhhCCEeeeeeecccccccCceeEEEEECCHHHHHHHHHHHCCCEeCCCCeEEEE
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999877899999
Q ss_pred eec
Q 022077 158 NWA 160 (303)
Q Consensus 158 ~~~ 160 (303)
.||
T Consensus 83 ~~A 85 (85)
T d1b7fa2 83 RLA 85 (85)
T ss_dssp EEC
T ss_pred EEC
Confidence 986
No 28
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.84 E-value=3e-21 Score=130.38 Aligned_cols=77 Identities=36% Similarity=0.524 Sum_probs=73.7
Q ss_pred eEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEeeccc
Q 022077 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253 (303)
Q Consensus 175 ~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~~~~~ 253 (303)
+|||+|||.++++++|+++|+ .||.|++++|..++ +|+++|||||+|.+.++|.+|++.|||..++|+.|+|+++.+
T Consensus 2 rl~V~nLp~~~~~~~l~~~F~-~~G~v~~~~i~~~~-~g~~~g~afV~f~~~~~A~~Ai~~l~g~~l~g~~l~V~~a~S 78 (78)
T d1no8a_ 2 KLLVSNLDFGVSDADIQELFA-EFGTLKKAAVHYDR-SGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTS 78 (78)
T ss_dssp EEEEESCCTTCCHHHHHHHHH-HHSCEEEEEESCSS-CCCSCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEEECC
T ss_pred EEEEECCCCCCCHHHHHHHHH-HhCCCeEEEEEEee-ccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeeC
Confidence 699999999999999999998 99999999999986 889999999999999999999999999999999999999863
No 29
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=4.5e-21 Score=136.63 Aligned_cols=85 Identities=32% Similarity=0.449 Sum_probs=78.2
Q ss_pred CCCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEee
Q 022077 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250 (303)
Q Consensus 171 ~~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~~ 250 (303)
...++|||+||+.++++++|+++|+ .||.|.+++|+.++.+|+++|||||+|.+.++|.+|++.+|+ .|+|+.|+|.|
T Consensus 8 ~~~~~lfV~nLp~~~te~~l~~~F~-~~G~i~~v~i~~d~~tg~~kg~afV~f~~~~~A~~Ai~~~~~-~l~Gr~l~V~~ 85 (103)
T d2cqda1 8 TTFTKIFVGGLPYHTTDASLRKYFE-GFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNP-IIDGRKANVNL 85 (103)
T ss_dssp CSSSEEEEECCCSSCCHHHHHHHHH-TTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSC-EETTEECEEEE
T ss_pred CCCcEEEEeCCCCcCcHHHHHHHHh-hcccccceeccccccccccCCeEEEEECCHHHHHHHHHHCCC-cCCCEEEEEEE
Confidence 3457899999999999999999998 999999999999999999999999999999999999998876 79999999999
Q ss_pred cccCCCC
Q 022077 251 ATNKKTV 257 (303)
Q Consensus 251 ~~~~~~~ 257 (303)
+..+...
T Consensus 86 a~~~~~p 92 (103)
T d2cqda1 86 AYLGAKP 92 (103)
T ss_dssp STTTCCC
T ss_pred cCCCCCC
Confidence 9876543
No 30
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.84 E-value=1.1e-21 Score=131.93 Aligned_cols=76 Identities=26% Similarity=0.406 Sum_probs=73.1
Q ss_pred ceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEeec
Q 022077 174 HTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251 (303)
Q Consensus 174 ~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~~~ 251 (303)
++|||+|||.++++++|+++|+ +||.|++++|++|+.+|+++|||||+|.+.++|.+|++ +++..++|+.|+|++|
T Consensus 1 cklfV~nLp~~~te~~l~~~F~-~~G~i~~v~i~~d~~tg~~kG~aFV~f~~~~~a~~al~-~~~~~i~Gr~i~V~~A 76 (77)
T d1uawa_ 1 CKMFIGGLSWQTTQEGLREYFG-QFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLA-QSRHELDSKTIDPKVA 76 (77)
T ss_dssp CCEEEESCCSSCCSHHHHHHHT-TTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHH-TTTCCCSSCCCEEEEC
T ss_pred CEEEEeCCCCcCCHHHHHHHHH-HhCCcceeeeecccCCCCccceEEEEECCHHHHHHHHH-cCCCEECCeEEEEEEC
Confidence 5899999999999999999998 99999999999999999999999999999999999997 6999999999999876
No 31
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.84 E-value=5.8e-21 Score=131.38 Aligned_cols=78 Identities=15% Similarity=0.362 Sum_probs=72.9
Q ss_pred EEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCC---CceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEeecc
Q 022077 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTG---RTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252 (303)
Q Consensus 176 l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~---~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~~~~ 252 (303)
|||+|||.++++++|+++|+ .||.|++++|++++.++ .++|||||+|++.++|.+|++.|||..++|+.|+|.|++
T Consensus 1 LfV~nLp~~~t~~~l~~~F~-~~G~v~~v~i~~~~~~~~~~~~kG~afV~f~~~~~A~~A~~~~~~~~~~g~~i~V~~a~ 79 (85)
T d2cpfa1 1 LFIKNLNFSTTEETLKGVFS-KVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISE 79 (85)
T ss_dssp EEEESCCTTCCHHHHHHHHH-TTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCEETTEECEEECSS
T ss_pred CEEcCCCCCCCHHHHHHHHH-HhCCccccceecccccccccccceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECC
Confidence 79999999999999999998 99999999999987655 468999999999999999999999999999999999986
Q ss_pred cC
Q 022077 253 NK 254 (303)
Q Consensus 253 ~~ 254 (303)
.+
T Consensus 80 ~~ 81 (85)
T d2cpfa1 80 RA 81 (85)
T ss_dssp CS
T ss_pred CC
Confidence 54
No 32
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.84 E-value=7.3e-21 Score=131.55 Aligned_cols=83 Identities=19% Similarity=0.368 Sum_probs=77.6
Q ss_pred CCCcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEe
Q 022077 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRL 157 (303)
Q Consensus 78 ~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v 157 (303)
..+.++|||+||+.++|+++|+++|++||.|.++++.+++.+|+++|||||+|.+.++|++|++.|||..+ .++.|+|
T Consensus 4 s~~~~~l~V~nL~~~~t~~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~afV~f~~~~~A~~A~~~lng~~l--~g~~l~V 81 (88)
T d1rk8a_ 4 SVEGWILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEI--MGQTIQV 81 (88)
T ss_dssp CC-CEEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHHTTCEE--TTEECEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHHcCCcccccccccccccccccceeEEECCHHHHHHHHHHcCCCEE--CCEEEEE
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999 7899999
Q ss_pred eecCC
Q 022077 158 NWASF 162 (303)
Q Consensus 158 ~~~~~ 162 (303)
+|+..
T Consensus 82 ~~a~~ 86 (88)
T d1rk8a_ 82 DWCFV 86 (88)
T ss_dssp EESEE
T ss_pred EEecC
Confidence 99864
No 33
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=4.9e-21 Score=136.04 Aligned_cols=83 Identities=22% Similarity=0.346 Sum_probs=78.3
Q ss_pred CceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEeecc
Q 022077 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252 (303)
Q Consensus 173 ~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~~~~ 252 (303)
.++|||+||++++++++|+++|+ +||.|..+.|.+|..++.++|||||+|.+.++|.+|+. ++|..|+|+.|.|.++.
T Consensus 20 ~~~lfVgnLp~~~te~~L~~~F~-~~G~i~~~~i~~d~~~~~~kg~aFV~f~~~~~a~~al~-~~~~~l~G~~i~V~~a~ 97 (103)
T d1x4ba1 20 FRKLFIGGLSFETTEESLRNYYE-QWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSIDGRVVEPKRAV 97 (103)
T ss_dssp HTEEEEECCTTCCCHHHHHHHHT-SSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHT-SCSEEETTEEEEEECCS
T ss_pred CCEEEEeCCCCcCCHHHHHHHHH-hhCcccceeecccccCCCccCeEEEEECCHHHHHHHHH-hCCCeECCEEEEEEECc
Confidence 47899999999999999999998 99999999999999899999999999999999999986 79999999999999999
Q ss_pred cCCCC
Q 022077 253 NKKTV 257 (303)
Q Consensus 253 ~~~~~ 257 (303)
++..+
T Consensus 98 ~ke~~ 102 (103)
T d1x4ba1 98 AREES 102 (103)
T ss_dssp SCCCC
T ss_pred ccCCC
Confidence 88754
No 34
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=8.4e-21 Score=129.93 Aligned_cols=79 Identities=25% Similarity=0.365 Sum_probs=74.6
Q ss_pred CCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEeec
Q 022077 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251 (303)
Q Consensus 172 ~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~~~ 251 (303)
..++|||+|||.++++++|+++|+ .||.|.+++|++|+.+|+++|||||+|.+.++|.+|++ +++..|+|+.|+|+.|
T Consensus 5 ~~~~lfV~nlp~~~te~~l~~~F~-~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~a~~ai~-~~~~~i~Gr~i~V~~A 82 (84)
T d1l3ka1 5 QLRKLFIGGLSFETTDESLRSHFE-QWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKVDGRVVEPKRA 82 (84)
T ss_dssp GGGEEEEESCCTTCCHHHHHHHHG-GGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEETTEECEEEEC
T ss_pred CCcEEEEECCCCCCCHHHHHHHHH-hhccccceeecccccCCCcccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEee
Confidence 347899999999999999999998 99999999999999999999999999999999999997 5999999999999887
Q ss_pred c
Q 022077 252 T 252 (303)
Q Consensus 252 ~ 252 (303)
.
T Consensus 83 ~ 83 (84)
T d1l3ka1 83 V 83 (84)
T ss_dssp C
T ss_pred e
Confidence 5
No 35
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=99.84 E-value=5e-20 Score=138.79 Aligned_cols=83 Identities=27% Similarity=0.492 Sum_probs=78.1
Q ss_pred CCcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEee
Q 022077 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLN 158 (303)
Q Consensus 79 ~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~ 158 (303)
...++|||+|||+++|+++|+++|++||.|.++.+++++.+|+++|||||+|.+.++|.+|++.|||..| .++.|+|.
T Consensus 40 ~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~lng~~~--~gr~l~V~ 117 (139)
T d1u6fa1 40 DVLRNLMVNYIPTTVDEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNI--LNKRLKVA 117 (139)
T ss_dssp TTTSEEEEESCSTTCCHHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHTTTEEC--SSCEEEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhccccccccccccccccccceeeEEECCHHHHHHHHHHhCCCEE--CCEEEEEE
Confidence 4557899999999999999999999999999999999999999999999999999999999999999999 78999999
Q ss_pred ecCCC
Q 022077 159 WASFG 163 (303)
Q Consensus 159 ~~~~~ 163 (303)
|+...
T Consensus 118 ~a~~~ 122 (139)
T d1u6fa1 118 LAASG 122 (139)
T ss_dssp ESSCC
T ss_pred EcCCC
Confidence 98644
No 36
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=1.2e-20 Score=131.72 Aligned_cols=83 Identities=25% Similarity=0.497 Sum_probs=78.3
Q ss_pred CCcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEee
Q 022077 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLN 158 (303)
Q Consensus 79 ~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~ 158 (303)
..+++|||+|||.++|+++|+++|++||.|.++.+++++.+|+++|||||+|.+.++|.+|++.|||..+ .++.|+|.
T Consensus 5 ~~s~tlfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~--~gr~i~V~ 82 (93)
T d1h2vz_ 5 KKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRL--DDRIIRTD 82 (93)
T ss_dssp TTCCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTSEE--TTEECEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHCCcceeccccccccccccceEEEEECCHHHHHHHHHHhCCCEE--CCEEEEEE
Confidence 4678999999999999999999999999999999999999999999999999999999999999999999 78999999
Q ss_pred ecCCC
Q 022077 159 WASFG 163 (303)
Q Consensus 159 ~~~~~ 163 (303)
|+...
T Consensus 83 ~a~~~ 87 (93)
T d1h2vz_ 83 WDAGF 87 (93)
T ss_dssp EESCC
T ss_pred EcCCC
Confidence 98643
No 37
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=3.3e-21 Score=133.67 Aligned_cols=81 Identities=31% Similarity=0.550 Sum_probs=75.4
Q ss_pred CceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEeecc
Q 022077 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252 (303)
Q Consensus 173 ~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~~~~ 252 (303)
..+|||+||+.++++++|+++|+ .||.|.+++|+.+. +.++|||||+|++.++|.+|++.|||..++|+.|+|.+++
T Consensus 8 ~~~l~V~nLp~~~t~~~l~~~F~-~~G~v~~~~i~~~~--~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~V~~a~ 84 (89)
T d1cvja2 8 VGNIFIKNLDKSIDNKALYDTFS-AFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 84 (89)
T ss_dssp TTEEEEESCCSSCCHHHHHHHHH-TTSCEEEEEECCBT--TBCCSCEEEEESCHHHHHHHTTSSSEEEETTEEEEEEECC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHH-hcCCceEEEEEeec--CCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEECC
Confidence 45799999999999999999998 99999999999985 4468999999999999999999999999999999999999
Q ss_pred cCCC
Q 022077 253 NKKT 256 (303)
Q Consensus 253 ~~~~ 256 (303)
++++
T Consensus 85 ~~~~ 88 (89)
T d1cvja2 85 SRKE 88 (89)
T ss_dssp CTTT
T ss_pred CCCC
Confidence 8764
No 38
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=6.6e-21 Score=129.37 Aligned_cols=78 Identities=29% Similarity=0.524 Sum_probs=74.9
Q ss_pred eEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEeeecCC
Q 022077 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASF 162 (303)
Q Consensus 83 ~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~~~~~ 162 (303)
+|||||||.++|+++|+++|++||.|.++++++++.+|+++|||||+|.+.++|.+|++.|+|..+ .++.|+|.|+..
T Consensus 2 slfV~nL~~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~aFV~f~~~~~a~~ai~~l~g~~~--~gr~i~v~~a~~ 79 (80)
T d1cvja1 2 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVI--KGKPVRIMWSQR 79 (80)
T ss_dssp EEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHTTSTTCEE--TTEECEEEECCC
T ss_pred EEEEeCCCCcCCHHHHHHHHHHhCCEeEEEEEecccccCCCCceEEEECCHHHHHHHHHHcCCCEE--CCEEEEEEEeCC
Confidence 699999999999999999999999999999999999999999999999999999999999999999 789999999863
No 39
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.84 E-value=5.9e-21 Score=130.44 Aligned_cols=80 Identities=23% Similarity=0.444 Sum_probs=76.1
Q ss_pred cceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEeeec
Q 022077 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWA 160 (303)
Q Consensus 81 ~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~~~ 160 (303)
.++|||+|||.++|+++|+++|++||.|.++++.+++.+|+++|||||+|.+.++|.+|++.|||..+ .++.|+|.|+
T Consensus 2 ~t~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~g~~~g~afV~f~~~~~A~~ai~~lng~~~--~g~~l~v~~a 79 (82)
T d1b7fa1 2 NTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITV--RNKRLKVSYA 79 (82)
T ss_dssp CSEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCEE--TTEECEEEEC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeecccCCccccceEEECCHHHHHHHHHHhCCCEE--CCEEEEEEEc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999 7899999998
Q ss_pred CC
Q 022077 161 SF 162 (303)
Q Consensus 161 ~~ 162 (303)
..
T Consensus 80 ~p 81 (82)
T d1b7fa1 80 RP 81 (82)
T ss_dssp CC
T ss_pred CC
Confidence 63
No 40
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=1.4e-21 Score=138.42 Aligned_cols=81 Identities=22% Similarity=0.349 Sum_probs=76.6
Q ss_pred CceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEeecc
Q 022077 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252 (303)
Q Consensus 173 ~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~~~~ 252 (303)
.++|||+||+.++++++|+++|+ .||.|.+|+|+++..+|+++|||||+|.+.++|.+|+. |||..|+|+.|+|.++.
T Consensus 18 ~~tifV~nL~~~~te~~l~~~F~-~~G~V~~v~i~~d~~tg~~kG~afV~F~~~e~a~~A~~-l~g~~~~G~~l~V~~a~ 95 (101)
T d2cq4a1 18 ARTVFCMQLAARIRPRDLEDFFS-AVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIG-LTGQRLLGVPIIVQASQ 95 (101)
T ss_dssp HTEEEEESCCTTCCHHHHHHHHT-TTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHH-HTTEEETTEEEEEEEHH
T ss_pred CCEEEEECCCCCCCHHHHHHHHc-CCCeEEEEEeeecCCCccccceEEEEECCHHHHHHHHH-HCCCEECCEEEEEEECC
Confidence 46899999999999999999998 99999999999999899999999999999999999995 99999999999999987
Q ss_pred cCC
Q 022077 253 NKK 255 (303)
Q Consensus 253 ~~~ 255 (303)
.++
T Consensus 96 ~~~ 98 (101)
T d2cq4a1 96 AEK 98 (101)
T ss_dssp HHH
T ss_pred CCC
Confidence 654
No 41
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=1.6e-20 Score=130.39 Aligned_cols=82 Identities=26% Similarity=0.411 Sum_probs=77.8
Q ss_pred CCcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEee
Q 022077 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLN 158 (303)
Q Consensus 79 ~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~ 158 (303)
...++|||+|||.++|+++|+++|++||.|.++++.+++.+|.++|||||+|.+.++|.+|++.|+|..+ .++.|+|.
T Consensus 6 ~~~~~i~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~l~g~~~--~g~~i~v~ 83 (90)
T d2cq0a1 6 DDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGY--DHLILNVE 83 (90)
T ss_dssp SSSEEEEEESCCTTCCHHHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHHTTTCEE--TTEECEEE
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHHhcccccccccccccccccccceeEEECCHHHHHHHHHHhCCCEE--CCEEEEEE
Confidence 4568999999999999999999999999999999999999999999999999999999999999999999 78999999
Q ss_pred ecCC
Q 022077 159 WASF 162 (303)
Q Consensus 159 ~~~~ 162 (303)
|+..
T Consensus 84 ~akp 87 (90)
T d2cq0a1 84 WAKP 87 (90)
T ss_dssp ESSC
T ss_pred eeeC
Confidence 9874
No 42
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=9.7e-21 Score=126.75 Aligned_cols=75 Identities=24% Similarity=0.444 Sum_probs=71.2
Q ss_pred eEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEeec
Q 022077 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251 (303)
Q Consensus 175 ~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~~~ 251 (303)
+|||+||+.++++++|+++|+ +||.|.++.|.+++.+++++|||||+|.+.++|++|+. +++..|+|+.|+|+.|
T Consensus 1 klfV~nl~~~~te~~l~~~F~-~~G~i~~~~i~~d~~t~~~kg~afV~f~~~~~a~~Al~-~~~~~l~Gr~i~V~rA 75 (75)
T d1hd0a_ 1 KMFIGGLSWDTTKKDLKDYFS-KFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMD-QKEHKLNGKVIDPKRA 75 (75)
T ss_dssp CEEEECCCTTCCHHHHHHHHH-TTSCEEEEECCCBTTTTBCCSEEEEEESSHHHHHHHHH-TCCCCBTTBCCEECCC
T ss_pred CEEEeCCCCcCCHHHHHHHHH-hhccccccccccCCCCCCcCceEEEEECCHHHHHHHHh-cCCCEECCCEEEeeEC
Confidence 589999999999999999998 99999999999999999999999999999999999997 7999999999999754
No 43
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=4.4e-20 Score=131.17 Aligned_cols=82 Identities=26% Similarity=0.375 Sum_probs=77.5
Q ss_pred CcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEeee
Q 022077 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNW 159 (303)
Q Consensus 80 ~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~~ 159 (303)
++++|||+|||+++|+++|+++|+.||.|.++.++.++.+|+++|||||+|.+.++|.+|++.|||..+ .++.|+|.|
T Consensus 17 ~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~g~~kG~afV~f~~~~~A~~Ai~~lng~~~--~g~~i~V~~ 94 (102)
T d2cpza1 17 EGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQI--GMKRLKVQL 94 (102)
T ss_dssp TTCCEEEESCCSSCCHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHTTCEE--TTEECEEEC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhhccccccceeeecccCCCccceEEEeCCHHHHHHHHHHhCCCEE--CCEEEEEEE
Confidence 357899999999999999999999999999999999999999999999999999999999999999999 789999999
Q ss_pred cCCC
Q 022077 160 ASFG 163 (303)
Q Consensus 160 ~~~~ 163 (303)
+...
T Consensus 95 a~~k 98 (102)
T d2cpza1 95 KRSK 98 (102)
T ss_dssp CCCS
T ss_pred eCCC
Confidence 8754
No 44
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=3.4e-21 Score=137.41 Aligned_cols=87 Identities=25% Similarity=0.434 Sum_probs=81.6
Q ss_pred CCCCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEe
Q 022077 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249 (303)
Q Consensus 170 ~~~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~ 249 (303)
..++++|||+|||.++++++|+++|+ .||.|..+.+..+..+|+++|||||+|.+.++|.+|+..|||..|.|+.|+|.
T Consensus 15 ~~ps~tl~V~nLp~~~t~~~l~~~f~-~~G~v~~~~~~~~~~~g~~~g~~fV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~ 93 (102)
T d2cpxa1 15 GEPNKVLYLKNLSPRVTERDLVSLFA-RFQEKKGPPIQFRMMTGRMRGQAFITFPNKEIAWQALHLVNGYKLYGKILVIE 93 (102)
T ss_dssp CSCCSEEEEECCCTTCCHHHHHHHTH-HHHHSSSSCCEEEEECSSSCSEEEEECSSHHHHHHHHHHSTTCBCSSCBCEEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHh-hccceeeEEeecccccccccccceEEeccHHHHHHHHHHhCCCEECCEEEEEE
Confidence 34678999999999999999999998 99999999999888889999999999999999999999999999999999999
Q ss_pred ecccCCCC
Q 022077 250 PATNKKTV 257 (303)
Q Consensus 250 ~~~~~~~~ 257 (303)
|+++++.+
T Consensus 94 ~ak~k~~r 101 (102)
T d2cpxa1 94 FGKNKKQR 101 (102)
T ss_dssp ECCCCSCC
T ss_pred eCCCcccC
Confidence 99987654
No 45
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=3.1e-20 Score=126.81 Aligned_cols=79 Identities=29% Similarity=0.548 Sum_probs=75.3
Q ss_pred cceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEeeec
Q 022077 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWA 160 (303)
Q Consensus 81 ~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~~~ 160 (303)
.++|||+|||.++++++|+++|++||.|.++++.++..+|+++|||||+|.+.++|++|++.|+|..+ .++.|+|.|+
T Consensus 2 ~t~l~V~nLp~~~te~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~--~g~~l~v~~A 79 (82)
T d1fxla1 2 KTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL--QTKTIKVSYA 79 (82)
T ss_dssp CSEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEE--TTEECEEEEC
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHhCCcccccceeeccCCCceeeEEEEECCHHHHHHHHHHhCCCEE--CCEEEEEEEe
Confidence 35799999999999999999999999999999999998999999999999999999999999999999 7899999998
Q ss_pred C
Q 022077 161 S 161 (303)
Q Consensus 161 ~ 161 (303)
.
T Consensus 80 k 80 (82)
T d1fxla1 80 R 80 (82)
T ss_dssp C
T ss_pred e
Confidence 5
No 46
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.82 E-value=4.2e-20 Score=130.73 Aligned_cols=85 Identities=15% Similarity=0.255 Sum_probs=79.1
Q ss_pred CCcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEee
Q 022077 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLN 158 (303)
Q Consensus 79 ~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~ 158 (303)
...++|||+||++++|+++|+++|++||.|.++++.+++.+++++|||||+|.+.++|.+|++.|||..+ .++.|+|.
T Consensus 6 ~~~~~lfV~nL~~~~t~~~l~~~F~~~g~v~~v~i~~d~~tg~~~g~afV~f~~~~~a~~A~~~l~g~~~--~gr~i~V~ 83 (99)
T d1whwa_ 6 SGSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVF--QGRMLHVL 83 (99)
T ss_dssp CSCEEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHHTTTEES--SSCEEEEE
T ss_pred CCCCEEEEECCCCcCCHHHHHHHHHhcCCceeeeecccccccccCcceEEEECCHHHHHHHHHHcCCCEE--CCEEEEEE
Confidence 4567899999999999999999999999999999999999999999999999999999999999999999 78999999
Q ss_pred ecCCCCC
Q 022077 159 WASFGAG 165 (303)
Q Consensus 159 ~~~~~~~ 165 (303)
++.....
T Consensus 84 ~a~~~~~ 90 (99)
T d1whwa_ 84 PSTIKKE 90 (99)
T ss_dssp ECCCCST
T ss_pred ECCCCCc
Confidence 9886543
No 47
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.82 E-value=2.6e-20 Score=131.77 Aligned_cols=85 Identities=21% Similarity=0.390 Sum_probs=78.8
Q ss_pred CCCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhC------CceeCCe
Q 022077 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN------GVFCSTR 244 (303)
Q Consensus 171 ~~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~------g~~~~g~ 244 (303)
...++|||+|||.++++++|+++|+ .||.|.++.+..+..++.++|||||+|.+.++|.+|++.|+ |..+.|+
T Consensus 6 ~~~~tlfV~nLp~~~te~~l~~~f~-~~G~v~~~~~~~~~~~~~~~g~afV~F~~~~~a~~ai~~l~~~~~~~g~~~~gr 84 (98)
T d1x4ha1 6 TEGKTVFIRNLSFDSEEEALGEVLQ-QFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKLDGR 84 (98)
T ss_dssp CCCCCEEEESCCTTCCHHHHHHHHH-TTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHHHCTTTTTCCEESSSC
T ss_pred CCCCEEEEcCCCCcCCHHHHHHHHh-ccccceeeeeccccccccccceEEEEEcCHHHHHHHHHHcccccccCCcEECCE
Confidence 4567999999999999999999998 99999999999999899999999999999999999999886 6779999
Q ss_pred eeEEeecccCCC
Q 022077 245 PMRIGPATNKKT 256 (303)
Q Consensus 245 ~l~v~~~~~~~~ 256 (303)
.|+|.|++++..
T Consensus 85 ~l~v~~a~~k~~ 96 (98)
T d1x4ha1 85 QLKVDLAVTRDE 96 (98)
T ss_dssp EEEEECCCCCCC
T ss_pred EEEEEECCCCCc
Confidence 999999988754
No 48
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=9.5e-21 Score=131.33 Aligned_cols=82 Identities=22% Similarity=0.394 Sum_probs=77.5
Q ss_pred CcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEeee
Q 022077 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNW 159 (303)
Q Consensus 80 ~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~~ 159 (303)
..++|||+|||+++|+++|+++|++||.|.++.+++++.+|+++|||||+|.+.++|.+|++.|+|..+ .|+.|+|.|
T Consensus 4 ~~~tlfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~kg~afV~f~~~~~A~~ai~~l~~~~i--~g~~l~v~~ 81 (89)
T d2cqba1 4 TKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESEL--FGRTIRVNL 81 (89)
T ss_dssp CCSCEEEESCCSSCCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHHHTTEEE--TTEEEEEEE
T ss_pred CCcEEEEeCCCCcCCHHHHHHHHhhCCeEEecccccccccccccceeEEEECCHHHHHHHHHHcCCCEE--CCEEEEEEE
Confidence 468999999999999999999999999999999999999999999999999999999999999999999 789999999
Q ss_pred cCCC
Q 022077 160 ASFG 163 (303)
Q Consensus 160 ~~~~ 163 (303)
+...
T Consensus 82 a~p~ 85 (89)
T d2cqba1 82 AKPM 85 (89)
T ss_dssp CCCC
T ss_pred eCCC
Confidence 8643
No 49
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=3.3e-20 Score=131.98 Aligned_cols=87 Identities=23% Similarity=0.318 Sum_probs=79.0
Q ss_pred CCCCceEEEcCCCcccCHHHHHHHHhhhCCCcc--------eEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCcee
Q 022077 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTK--------GAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC 241 (303)
Q Consensus 170 ~~~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~--------~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~ 241 (303)
....++|||+||+.++++++|+++|+ .||.|. .+.+..+..+|+++|||||+|.+.++|.+|++.|||..|
T Consensus 5 ~~~~~~i~V~nLp~~~te~~l~~~F~-~~G~i~~~~~~~~~~~~~~~d~~~~~~~g~afV~f~~~~~a~~Ai~~l~g~~~ 83 (101)
T d2cpea1 5 DSDNSAIYVQGLNDSVTLDDLADFFK-QCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDF 83 (101)
T ss_dssp CCCCCEEEEECCCTTCCHHHHHHHHT-TTSCBCBCSSSCCBSEECCBCTTTCSBCSEEEEEBSSHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEECCCCcCCHHHHHHHHH-HCceEEEeeecccceeEEeeccccccccceeeEEecCHHHHHHHHHHhCCCEE
Confidence 45578999999999999999999998 999884 567778888899999999999999999999999999999
Q ss_pred CCeeeEEeecccCCCC
Q 022077 242 STRPMRIGPATNKKTV 257 (303)
Q Consensus 242 ~g~~l~v~~~~~~~~~ 257 (303)
+|+.|+|.|++.+...
T Consensus 84 ~gr~i~V~~a~~~~p~ 99 (101)
T d2cpea1 84 QGSKLKVSLARKKPPM 99 (101)
T ss_dssp TTEECEEECSSCCCCS
T ss_pred CCEEEEEEEcCCCCCC
Confidence 9999999999987544
No 50
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=2.3e-20 Score=128.08 Aligned_cols=80 Identities=23% Similarity=0.544 Sum_probs=76.2
Q ss_pred ceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEeeecC
Q 022077 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS 161 (303)
Q Consensus 82 ~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~~~~ 161 (303)
.+|||+|||.++|+++|+++|++||.|.++++++++.+|+++|||||+|.+.++|.+|++.|+|..+ .++.|+|.|+.
T Consensus 2 ~rlfV~nlp~~~te~~l~~~F~~~G~v~~v~i~~d~~tg~~rg~aFV~f~~~~~A~~a~~~l~~~~l--~g~~l~V~~A~ 79 (85)
T d2u2fa_ 2 HKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQL--GDKKLLVQRAS 79 (85)
T ss_dssp CCEEEETCCSSCCSHHHHHHHTSSSCEEEEEEECCCSSSCCCCEEEEEESSSHHHHHHHHTSSSCCC--SSSCCEEEECC
T ss_pred CEEEEECCCCCCCHHHHHHHHHhcCccceEEeeccccccccceeEEEEECCHHHHHHHHHHhCCCEE--CCEEEEEEECC
Confidence 4799999999999999999999999999999999999999999999999999999999999999999 78899999997
Q ss_pred CC
Q 022077 162 FG 163 (303)
Q Consensus 162 ~~ 163 (303)
..
T Consensus 80 ~~ 81 (85)
T d2u2fa_ 80 VG 81 (85)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 51
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=3.3e-20 Score=126.90 Aligned_cols=78 Identities=21% Similarity=0.375 Sum_probs=72.7
Q ss_pred CCCcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEe
Q 022077 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRL 157 (303)
Q Consensus 78 ~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v 157 (303)
+...++|||+||+.++|+++|+++|++||.|.++.+.+++.+|+++|||||+|.+.++|.+|++.|+|..+ .++.|+|
T Consensus 6 p~~~~~l~V~nL~~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~--~gr~i~V 83 (83)
T d2cqca1 6 PDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMEL--DGRRIRV 83 (83)
T ss_dssp CCGGGCEEEESCCSSCCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHHHTTEEE--TTEEEEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHHhCCCccccccccccccccccceEEEECCHHHHHHHHHHcCCCEE--CCEEeEC
Confidence 34568999999999999999999999999999999999999999999999999999999999999999999 6777765
No 52
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.82 E-value=1.2e-20 Score=129.94 Aligned_cols=81 Identities=20% Similarity=0.369 Sum_probs=70.8
Q ss_pred CCceEEEcCCCcccCH-HHHHHHHhhhCCCcceEEEEee-CCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEe
Q 022077 172 PDHTIFVGDLAADVTD-YMLQETFRARYPSTKGAKVVID-RLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249 (303)
Q Consensus 172 ~~~~l~v~nl~~~~~~-~~l~~~f~~~~G~i~~~~i~~~-~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~ 249 (303)
..++|||+|||.++++ ++|+++|+ .||.|++++|..+ ..+++++|||||+|.+.++|.+|++ |||..++|+.|+|+
T Consensus 3 e~~~l~V~nLp~~~t~ed~l~~~F~-~~G~i~~v~i~~~~~~~~~~kg~afV~f~~~~~a~~Al~-~n~~~~~gr~l~V~ 80 (86)
T d2ghpa3 3 EGREIMIRNLSTELLDENLLRESFE-GFGSIEKINIPAGQKEHSFNNCCAFMVFENKDSAERALQ-MNRSLLGNREISVS 80 (86)
T ss_dssp TTTEEEEEEECTTTCCHHHHHHHHG-GGSCEEEEECCSCCC---CCCEEEEEEESSHHHHHHHGG-GTTEEETTEEEEEE
T ss_pred CCCEEEEECCCCCcccHHHHHHHHH-hhhhccceeeecccCCccccceeeeEEECCHHHHHHHHh-cCCCEECCEEEEEE
Confidence 4689999999999865 56999998 9999999998764 4678999999999999999999995 99999999999999
Q ss_pred ecccC
Q 022077 250 PATNK 254 (303)
Q Consensus 250 ~~~~~ 254 (303)
|++.+
T Consensus 81 ~a~~k 85 (86)
T d2ghpa3 81 LADKK 85 (86)
T ss_dssp ECCCC
T ss_pred EcCCC
Confidence 99865
No 53
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=3e-20 Score=130.41 Aligned_cols=78 Identities=23% Similarity=0.439 Sum_probs=72.6
Q ss_pred CCCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEee
Q 022077 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250 (303)
Q Consensus 171 ~~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~~ 250 (303)
...++|||+||+.++++++|+++|+ .||.|++|+|+.+ +|||||+|++.++|.+|+..|||..|+|+.|+|.|
T Consensus 16 ~~~~~l~v~nL~~~~te~~L~~~F~-~fG~i~~v~i~~~------kg~afV~f~~~~~A~~Ai~~l~~~~i~g~~l~v~~ 88 (96)
T d1x4ga1 16 PKNCTVYCGGIASGLTDQLMRQTFS-PFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYW 88 (96)
T ss_dssp SSCCEEEEECCSSCCCHHHHHHHHH-HHSCEEEEEEETT------TTEEEEEESSHHHHHHHHHHHTTCEETTEECEEEC
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHH-HhCCceEEEEEec------ceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEE
Confidence 3457899999999999999999998 9999999999866 78999999999999999999999999999999999
Q ss_pred cccCC
Q 022077 251 ATNKK 255 (303)
Q Consensus 251 ~~~~~ 255 (303)
++++.
T Consensus 89 ak~~p 93 (96)
T d1x4ga1 89 GKESP 93 (96)
T ss_dssp CCCCC
T ss_pred cCCCC
Confidence 98754
No 54
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=4.5e-20 Score=128.29 Aligned_cols=84 Identities=23% Similarity=0.500 Sum_probs=78.1
Q ss_pred CCcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEee
Q 022077 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLN 158 (303)
Q Consensus 79 ~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~ 158 (303)
.+.++|||+|||+++|+++|+++|++||.|..+.++++..+|.++|||||+|.+.++|++|++.|+|..+ .|+.|+|.
T Consensus 3 ~~~~kifV~nLp~~~t~~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~~~a~~Ai~~l~~~~~--~g~~l~V~ 80 (90)
T d1x5sa1 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV--DGRQIRVD 80 (90)
T ss_dssp CCCSEEEEESCCTTCCHHHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCCT--TSCCCEEE
T ss_pred CCCCEEEEECCCCcCCHHHHHHhhhccccccceeeccccccccccceEEEEECCHHHHHHHHHHcCCCEE--CCEEEEEE
Confidence 4567899999999999999999999999999999999988999999999999999999999999999998 78999999
Q ss_pred ecCCCC
Q 022077 159 WASFGA 164 (303)
Q Consensus 159 ~~~~~~ 164 (303)
|+....
T Consensus 81 ~a~~~~ 86 (90)
T d1x5sa1 81 QAGKSS 86 (90)
T ss_dssp EEECCC
T ss_pred EcCCCC
Confidence 987543
No 55
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=7.6e-20 Score=123.90 Aligned_cols=77 Identities=22% Similarity=0.409 Sum_probs=73.0
Q ss_pred CceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEeec
Q 022077 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251 (303)
Q Consensus 173 ~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~~~ 251 (303)
.++|||+|||.++++++|+++|+ .||.|..+.+..++.++.++|||||+|.+.++|.+|+. +||..|+|+.|+|+.|
T Consensus 2 ~r~lfV~nLp~~~te~~l~~~F~-~~G~i~~~~~~~~~~~~~~~g~afV~f~~~e~~~~al~-~~~~~l~Gr~i~V~~A 78 (79)
T d1l3ka2 2 VKKIFVGGIKEDTEEHHLRDYFE-QYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGHNCEVRKA 78 (79)
T ss_dssp CSEEEEECCTTTCCHHHHHHHHT-TTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-CSCCEETTEECEEEEC
T ss_pred CCEEEECCCCCcCCHHHHHHHHH-HhccccccccccCCCCcccccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEEC
Confidence 47899999999999999999998 99999999999999999999999999999999999985 7999999999999876
No 56
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=6.6e-20 Score=128.62 Aligned_cols=83 Identities=18% Similarity=0.322 Sum_probs=74.5
Q ss_pred CCCCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEe
Q 022077 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249 (303)
Q Consensus 170 ~~~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~ 249 (303)
....++|||+|||.++++++|+++|+ .||.|..+.+..+ +.+++||||+|++.++|.+|++.|||..|.|+.|+|+
T Consensus 11 ~~~~~~l~V~nLp~~~t~~~l~~~F~-~~G~v~~~~~~~~---~~~~g~afV~f~~~e~a~~Ai~~l~g~~~~g~~l~V~ 86 (95)
T d1x4aa1 11 GNNDCRIYVGNLPPDIRTKDIEDVFY-KYGAIRDIDLKNR---RGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVE 86 (95)
T ss_dssp CCCSSEEEEESCCTTCCHHHHHHHHG-GGSCEEEEEECCS---SSSSCCEEEEESCHHHHHHHHHHHTTCEETTEECEEE
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHh-cCCceEEEEeccc---ccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEE
Confidence 35567899999999999999999998 9999999887554 4568999999999999999999999999999999999
Q ss_pred ecccCCC
Q 022077 250 PATNKKT 256 (303)
Q Consensus 250 ~~~~~~~ 256 (303)
|++..+.
T Consensus 87 ~a~~~r~ 93 (95)
T d1x4aa1 87 FPRSGRG 93 (95)
T ss_dssp CCCCCCC
T ss_pred eccCCCC
Confidence 9987643
No 57
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.81 E-value=2.5e-20 Score=125.02 Aligned_cols=75 Identities=24% Similarity=0.391 Sum_probs=72.0
Q ss_pred eEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEeec
Q 022077 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251 (303)
Q Consensus 175 ~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~~~ 251 (303)
+|||+|||.++++++|+++|+ .||.|..+.+..++.++.+++||||+|.+.++|.+|++ |||..|+|+.|+|++|
T Consensus 1 rlfV~nLp~~~te~~l~~~F~-~~G~i~~~~~~~~~~~~~~~~~afV~F~~~~~a~~al~-~~~~~l~gr~i~V~~A 75 (75)
T d2msta_ 1 KIFVGGLSVNTTVEDVKHYFE-QFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE-IHFHEINNKMVECKKA 75 (75)
T ss_dssp CEEEECCCSSCCHHHHHHHHH-TTSCCSEECCBCCTTCTTSCCEEEEECSCHHHHHHHHH-CSSCCBTTBCCEEEEC
T ss_pred CEEEeCCCCCCCHHHHHHHHH-HhCCcceeeeeeeccccccCceeEEEECCHHHHHHHHh-cCCCEECCeEEEEEEC
Confidence 599999999999999999998 99999999999999899999999999999999999996 8999999999999876
No 58
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=2.8e-20 Score=132.96 Aligned_cols=82 Identities=26% Similarity=0.575 Sum_probs=77.0
Q ss_pred CCcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEee
Q 022077 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLN 158 (303)
Q Consensus 79 ~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~ 158 (303)
...++|||+|||.++|+++|+++|++||.|.++++++++.+|+++|||||+|.+.++|.+|++.|+|..+ .++.|+|.
T Consensus 6 ~~~rtl~V~nLp~~~te~~l~~~f~~~G~i~~v~i~~~~~tg~~~g~afV~f~~~~~a~~ai~~l~~~~~--~g~~i~V~ 83 (104)
T d1p1ta_ 6 RSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREF--SGRALRVD 83 (104)
T ss_dssp HHHSCEEEESCCTTSCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHHSSSBSC--SSSCBEEE
T ss_pred CCCCEEEEECCCCcCCHHHHHHhhhccccccccccccccceeccCCceEEEECCHHHHHHHHHHcCCCEE--CCEEEEEE
Confidence 3457899999999999999999999999999999999999999999999999999999999999999999 78899999
Q ss_pred ecCC
Q 022077 159 WASF 162 (303)
Q Consensus 159 ~~~~ 162 (303)
|+..
T Consensus 84 ~a~~ 87 (104)
T d1p1ta_ 84 NAAS 87 (104)
T ss_dssp ETTC
T ss_pred ECCC
Confidence 9764
No 59
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.81 E-value=1e-19 Score=127.25 Aligned_cols=83 Identities=19% Similarity=0.485 Sum_probs=76.1
Q ss_pred CCcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecC-CCCCcccEEEEEEccHHHHHHHHHHh-CCCCCCCCCceeE
Q 022077 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNK-QTGQIEGYGFIEFISRAGAERVLQTF-NGTPMPNGEQNFR 156 (303)
Q Consensus 79 ~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~-~~~~~~g~afv~f~~~~~a~~a~~~l-~g~~~~~~~~~i~ 156 (303)
...++|||+|||.++++++|+++|+.||.|.+++++++. .+|+++|||||+|.+.++|.+|++.| +|..+ .|+.|+
T Consensus 6 ~~~~~l~V~nLp~~~~e~~l~~~F~~~G~i~~v~i~~~~~~~g~~rg~afV~f~~~~~A~~Ai~~l~~~~~~--~Gr~l~ 83 (94)
T d2cpha1 6 QTTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHL--YGRRLV 83 (94)
T ss_dssp SCCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBS--SSCBCE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHhCCceEEEEEeccccCCCcccEEEEEECCHHHHHHHHHHccCCcEE--CCEEEE
Confidence 456789999999999999999999999999999998875 47899999999999999999999988 88888 789999
Q ss_pred eeecCCC
Q 022077 157 LNWASFG 163 (303)
Q Consensus 157 v~~~~~~ 163 (303)
|.|+...
T Consensus 84 V~~A~~~ 90 (94)
T d2cpha1 84 LEWADSE 90 (94)
T ss_dssp EEECCCC
T ss_pred EEEcCCC
Confidence 9999755
No 60
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=9.6e-21 Score=126.39 Aligned_cols=75 Identities=23% Similarity=0.394 Sum_probs=70.9
Q ss_pred eEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEeec
Q 022077 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251 (303)
Q Consensus 175 ~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~~~ 251 (303)
+|||+|||+++++++|+++|+ +||.|++++|+.++.+++++|||||+|++.++|.+|++. ++..++|+.|+|+.|
T Consensus 1 klfVgnLp~~~te~~l~~~F~-~~G~I~~v~i~~d~~t~~~rG~~FV~f~~~~~a~~al~~-~~~~i~g~~i~vk~A 75 (75)
T d1x0fa1 1 KIFVGGLSPDTPEEKIREYFG-GFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK-KYHNVGLSKCEIKVA 75 (75)
T ss_dssp EEEEESCCSSCCHHHHHHHHH-HHSCEEEEECCCCTTTCCTTCCEEEEESSSHHHHHHTTC-SSCCBTTBCCEEECC
T ss_pred CEEEcCCCCCCCHHHHHHHHH-HhCCcccccccccccccccccEEEEEECCHHHHHHHHhh-CCCEECCEEeEEEEC
Confidence 599999999999999999998 999999999999999999999999999999999999974 778999999999865
No 61
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.81 E-value=1.2e-20 Score=131.15 Aligned_cols=82 Identities=17% Similarity=0.334 Sum_probs=75.2
Q ss_pred CCCCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEe
Q 022077 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249 (303)
Q Consensus 170 ~~~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~ 249 (303)
.....+|||+||+.++++++|+++|+ .||.|.++.|+.+ .+|+++|||||+|.+.++|.+|++ |||..++|+.|+|.
T Consensus 10 ~~~~~~ifV~nL~~~~te~~l~~~F~-~~G~i~~~~v~~~-~~g~~kg~afv~F~~~e~a~~Al~-~~g~~~~g~~i~V~ 86 (91)
T d1fjeb1 10 STTPFNLFIGNLNPNKSVAELKVAIS-ELFAKNDLAVVDV-RTGTNRKFGYVDFESAEDLEKALE-LTGLKVFGNEIKLE 86 (91)
T ss_dssp CSSSEEEEEECCCTTSCHHHHHHHHH-HHHHHHTCCCCEE-EEETTTTEEEEEESSHHHHHHHHH-GGGEEETTEEEEEE
T ss_pred CCCCcEEEEeCccCcchHHHHHHHHh-cCCcEEEeeeeec-CCCCccEEeEEeeCCHHHHHHHHh-cCCcEECCEEEEEE
Confidence 44567899999999999999999998 9999999988765 489999999999999999999996 99999999999999
Q ss_pred ecccC
Q 022077 250 PATNK 254 (303)
Q Consensus 250 ~~~~~ 254 (303)
+++.|
T Consensus 87 ~ak~k 91 (91)
T d1fjeb1 87 KPKGR 91 (91)
T ss_dssp CCCCS
T ss_pred ecCCC
Confidence 99865
No 62
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.80 E-value=6.7e-20 Score=125.22 Aligned_cols=78 Identities=26% Similarity=0.482 Sum_probs=71.2
Q ss_pred CCCCCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCcee-CCeeeE
Q 022077 169 DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC-STRPMR 247 (303)
Q Consensus 169 ~~~~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~-~g~~l~ 247 (303)
...++++|||+||+.++++++|+++|+ .||.|++++++++. +|||||+|.+.++|.+|+..|||..+ +|+.|+
T Consensus 4 ~~pP~~tl~V~nLp~~~t~~~l~~~f~-~~G~i~~v~~~~~~-----~g~afV~f~~~~~A~~A~~~l~g~~~~~~~~i~ 77 (83)
T d2b0ga1 4 EQPPNQILFLTNLPEETNEMMLSMLFN-QFPGFKEVRLVPNR-----HDIAFVEFTTELQSNAAKEALQGFKITPTHAMK 77 (83)
T ss_dssp CCSCCSEEEEESCCTTCCHHHHHHHHT-TSTTEEEEEECTTT-----CSCEEEEESSHHHHHHHHHHHTTCBSSTTCBCE
T ss_pred CCCCCCEEEEECCCCCCCHHHHHhhhc-cCccEEEeeeeccc-----ceeEEEecCCHHHHHHHHHHhCCcEeCCCcEEE
Confidence 456788999999999999999999998 99999999997553 78999999999999999999999998 578999
Q ss_pred Eeecc
Q 022077 248 IGPAT 252 (303)
Q Consensus 248 v~~~~ 252 (303)
|.|++
T Consensus 78 v~~ak 82 (83)
T d2b0ga1 78 ITFAK 82 (83)
T ss_dssp EEECC
T ss_pred EEEec
Confidence 99987
No 63
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=1e-19 Score=124.43 Aligned_cols=81 Identities=20% Similarity=0.417 Sum_probs=74.6
Q ss_pred CCCcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEe
Q 022077 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRL 157 (303)
Q Consensus 78 ~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v 157 (303)
+...++|||+|||.++|+++|+++|++||.|.++.+++++.+|+++|||||+|.+.++|.+|++ +++..+ .|+.|+|
T Consensus 3 pe~~~~lfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~a~~ai~-~~~~~i--~Gr~i~V 79 (84)
T d1l3ka1 3 PEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKV--DGRVVEP 79 (84)
T ss_dssp CGGGGEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEE--TTEECEE
T ss_pred CCCCcEEEEECCCCCCCHHHHHHHHHhhccccceeecccccCCCcccEEEEEEcCHHHHHHHHH-hCCCEE--CCEEEEE
Confidence 3456899999999999999999999999999999999999999999999999999999999996 688888 7888998
Q ss_pred eecC
Q 022077 158 NWAS 161 (303)
Q Consensus 158 ~~~~ 161 (303)
..|.
T Consensus 80 ~~A~ 83 (84)
T d1l3ka1 80 KRAV 83 (84)
T ss_dssp EECC
T ss_pred Eeee
Confidence 8764
No 64
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=7e-20 Score=133.15 Aligned_cols=81 Identities=15% Similarity=0.264 Sum_probs=74.3
Q ss_pred CCCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEee
Q 022077 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250 (303)
Q Consensus 171 ~~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~~ 250 (303)
..+++|||+||+.++++++|+++|+ .||.|++|++..+ +.++|||||+|.+.++|..|++.|||..|+|+.|+|.|
T Consensus 5 ~~~r~l~V~nLp~~~te~~l~~~F~-~~G~v~~i~~~~~---~~~kG~afV~f~~~~~A~~Ai~~l~g~~~~gr~l~V~~ 80 (114)
T d2f9da1 5 EVNRILYIRNLPYKITAEEMYDIFG-KYGPIRQIRVGNT---PETRGTAYVVYEDIFDAKNACDHLSGFNVCNRYLVVLY 80 (114)
T ss_dssp TCCSEEEEESCCTTCCHHHHHHHHH-TTSCEEEEEEECS---TTTTTEEEEEESSHHHHHHHHHHHTTCEETTEECEEEE
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHh-hcCCeEeeccccc---CCcCCeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEE
Confidence 3467999999999999999999998 9999999998755 56789999999999999999999999999999999999
Q ss_pred cccCC
Q 022077 251 ATNKK 255 (303)
Q Consensus 251 ~~~~~ 255 (303)
+..++
T Consensus 81 a~~~~ 85 (114)
T d2f9da1 81 YNANR 85 (114)
T ss_dssp CCHHH
T ss_pred cCCCc
Confidence 87654
No 65
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=6.3e-20 Score=124.32 Aligned_cols=77 Identities=23% Similarity=0.424 Sum_probs=70.7
Q ss_pred ceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCc-eeCCeeeEEeecc
Q 022077 174 HTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGV-FCSTRPMRIGPAT 252 (303)
Q Consensus 174 ~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~-~~~g~~l~v~~~~ 252 (303)
++|||+|||.++++++|+++|+ +||.|.++++... +|||||+|.+.++|.+|++.|||. .++|+.|+|.|+.
T Consensus 2 n~l~V~nLp~~~te~~L~~~F~-~~G~i~~~~~~~~------rg~aFV~f~~~~~A~~Ai~~lng~~~~~G~~i~V~~a~ 74 (80)
T d2cqha1 2 NKLYIGNLSPAVTADDLRQLFG-DRKLPLAGQVLLK------SGYAFVDYPDQNWAIRAIETLSGKVELHGKIMEVDYSV 74 (80)
T ss_dssp CCEEEECCCTTCCHHHHHHHHH-HTTCCCSSCEEEE------TTEEEECCSCHHHHHHHHHHHTTTCEETTEECEEEECC
T ss_pred CEEEEECCCCCCCHHHHHHHHH-HhCcEEEeEEecc------cceEEEEECCHHHHHHHHHHhCCCeEECCEEEEEEEcC
Confidence 4799999999999999999998 9999998888765 689999999999999999999996 6999999999999
Q ss_pred cCCCC
Q 022077 253 NKKTV 257 (303)
Q Consensus 253 ~~~~~ 257 (303)
+++.+
T Consensus 75 ~k~~r 79 (80)
T d2cqha1 75 SKKLR 79 (80)
T ss_dssp CCCCC
T ss_pred CcCcC
Confidence 87654
No 66
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.80 E-value=3.4e-20 Score=124.53 Aligned_cols=76 Identities=26% Similarity=0.491 Sum_probs=70.7
Q ss_pred ceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEeeec
Q 022077 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWA 160 (303)
Q Consensus 82 ~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~~~ 160 (303)
|+|||+|||+++|+++|+++|++||.|.++++.+++.+|+++|||||+|.+.++|.+|++ +++..+ .|+.|+|.+|
T Consensus 1 cklfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~aFV~f~~~~~a~~al~-~~~~~i--~Gr~i~V~~A 76 (77)
T d1uawa_ 1 CKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLA-QSRHEL--DSKTIDPKVA 76 (77)
T ss_dssp CCEEEESCCSSCCSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHH-TTTCCC--SSCCCEEEEC
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHhCCcceeeeecccCCCCccceEEEEECCHHHHHHHHH-cCCCEE--CCeEEEEEEC
Confidence 689999999999999999999999999999999999999999999999999999999996 699998 6677777754
No 67
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.80 E-value=7.9e-20 Score=125.58 Aligned_cols=77 Identities=23% Similarity=0.439 Sum_probs=72.0
Q ss_pred CCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEeec
Q 022077 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251 (303)
Q Consensus 172 ~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~~~ 251 (303)
..++|||+|||.++++++|+++|+ .||.|.+|++.++ +|||||+|++.++|.+|+..|||..++|+.|+|+|+
T Consensus 7 ~~~~l~V~nLp~~~~~~~l~~~F~-~~G~i~~i~~~~~------k~~afV~f~~~~~A~~A~~~l~g~~i~g~~l~V~~A 79 (86)
T d2cpja1 7 QRSRLFVGNLPPDITEEEMRKLFE-KYGKAGEVFIHKD------KGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFA 79 (86)
T ss_dssp CTTEEEEESCCTTCCHHHHHHHTS-TTCCCSEEEEETT------TTEEEEECSSSHHHHHHHHHHTTCCBTTBCCEEEES
T ss_pred CCCEEEEECCCCCCCHHHHHHHHH-HhCCceEeeeecc------cceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEC
Confidence 456899999999999999999998 9999999999755 679999999999999999999999999999999999
Q ss_pred ccCC
Q 022077 252 TNKK 255 (303)
Q Consensus 252 ~~~~ 255 (303)
..+.
T Consensus 80 ~~~~ 83 (86)
T d2cpja1 80 CHSA 83 (86)
T ss_dssp SCCS
T ss_pred CCcC
Confidence 8765
No 68
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=2e-19 Score=124.77 Aligned_cols=82 Identities=27% Similarity=0.514 Sum_probs=74.9
Q ss_pred CCCcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEe
Q 022077 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRL 157 (303)
Q Consensus 78 ~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v 157 (303)
....++|||+|||.++|+++|+++|+.||.|.++.+.+++.++ +|||||+|.+.++|.+|++.|+|..+ .++.|+|
T Consensus 5 ~~~~~tl~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~--~~~afV~f~~~~~A~~A~~~l~~~~~--~g~~i~v 80 (90)
T d2cqia1 5 DGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALAAMNGRKI--LGKEVKV 80 (90)
T ss_dssp SCCCCEEEEESCCTTCCHHHHHHHHHHHSCEEEEEEECCCCSS--CCEEEEEESSHHHHHHHHHHHTTEEE--TTEEEEE
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHHhcCCceeeeeecccCcc--ceeeEEEECCHHHHHHHHHHcCCCEE--CCEEEEE
Confidence 4556899999999999999999999999999999999987544 78999999999999999999999999 7899999
Q ss_pred eecCCC
Q 022077 158 NWASFG 163 (303)
Q Consensus 158 ~~~~~~ 163 (303)
.|+...
T Consensus 81 ~~a~~~ 86 (90)
T d2cqia1 81 NWATTP 86 (90)
T ss_dssp EECCCT
T ss_pred EEcCCC
Confidence 999754
No 69
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=8.6e-20 Score=129.49 Aligned_cols=82 Identities=17% Similarity=0.416 Sum_probs=75.7
Q ss_pred CCCCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEe
Q 022077 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249 (303)
Q Consensus 170 ~~~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~ 249 (303)
....++|||+|||.++++++|+++|+ .||.|..+.+..+. ++.++|||||+|.+.++|.+|++.|||..|.|+.+.|.
T Consensus 15 ~~~~~~lfV~nLp~~~te~~L~~~F~-~~G~i~~~~~~~~~-~~~~~g~afV~f~~~~~A~~Ai~~lng~~i~gr~~~v~ 92 (101)
T d1x5oa1 15 EQDPTNLYISNLPLSMDEQELENMLK-PFGQVISTRILRDS-SGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSA 92 (101)
T ss_dssp CCCTTEEEEESCCTTCCHHHHHHTTT-TTSCEEEEEEEECS-SSCEEEEEEEEESCHHHHHHHHHHHBTCCCCCCTTSCC
T ss_pred cCCCCEEEEeCCCCCCCHHHHHHHHh-hcccccceeeeccc-ccccccceeEEeCCHHHHHHHHHHhCCCEECCcCCccC
Confidence 44567899999999999999999998 99999999998885 78899999999999999999999999999999999998
Q ss_pred eccc
Q 022077 250 PATN 253 (303)
Q Consensus 250 ~~~~ 253 (303)
++++
T Consensus 93 ~~~P 96 (101)
T d1x5oa1 93 PTEP 96 (101)
T ss_dssp CSSC
T ss_pred CCCC
Confidence 8764
No 70
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.80 E-value=1.2e-19 Score=127.59 Aligned_cols=84 Identities=18% Similarity=0.313 Sum_probs=75.3
Q ss_pred CCCCCCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeE
Q 022077 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMR 247 (303)
Q Consensus 168 ~~~~~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~ 247 (303)
......++|||+||+.++++++|+++|+ .||.|..++. +++++|||||+|.+.++|.+|+..|||..|+|+.|+
T Consensus 11 ~~~~~~~~l~V~nL~~~~te~~l~~~F~-~~g~v~~~~~-----~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~gr~i~ 84 (96)
T d1fjca_ 11 KKVRAARTLLAKNLSFNITEDELKEVFE-DALEIRLVSQ-----DGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVS 84 (96)
T ss_dssp STTTGGGEEEEESCCSSCCHHHHHHHHC-SEEEECCEEE-----TTEEEEEEEEEESSHHHHHHHHHHTTEEEETTEEEE
T ss_pred CcCCCCCEEEEeCCCCCCCHHHHHHHHH-hcccceeeee-----cCccccEEEEEeCCHHHHHHHHHHcCCCEECCEEEE
Confidence 3345578999999999999999999998 9999876643 678899999999999999999999999999999999
Q ss_pred EeecccCCCC
Q 022077 248 IGPATNKKTV 257 (303)
Q Consensus 248 v~~~~~~~~~ 257 (303)
|.|+.+++..
T Consensus 85 V~~a~~k~~~ 94 (96)
T d1fjca_ 85 LYYTGEKGGT 94 (96)
T ss_dssp EEECSSSCCC
T ss_pred EEEeCCCCCC
Confidence 9999988754
No 71
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=2.9e-19 Score=127.14 Aligned_cols=82 Identities=29% Similarity=0.530 Sum_probs=75.2
Q ss_pred CCcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEee
Q 022077 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLN 158 (303)
Q Consensus 79 ~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~ 158 (303)
...++|||+|||+++|+++|+++|++||.|.++.+++++.+|+++|||||+|.+.++|.+|++.+++ .+ .|+.|+|.
T Consensus 8 ~~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kg~afV~f~~~~~A~~Ai~~~~~-~l--~Gr~l~V~ 84 (103)
T d2cqda1 8 TTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNP-II--DGRKANVN 84 (103)
T ss_dssp CSSSEEEEECCCSSCCHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSC-EE--TTEECEEE
T ss_pred CCCcEEEEeCCCCcCcHHHHHHHHhhcccccceeccccccccccCCeEEEEECCHHHHHHHHHHCCC-cC--CCEEEEEE
Confidence 3457899999999999999999999999999999999999999999999999999999999998876 56 68999999
Q ss_pred ecCCC
Q 022077 159 WASFG 163 (303)
Q Consensus 159 ~~~~~ 163 (303)
|+...
T Consensus 85 ~a~~~ 89 (103)
T d2cqda1 85 LAYLG 89 (103)
T ss_dssp ESTTT
T ss_pred EcCCC
Confidence 98754
No 72
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.79 E-value=1.5e-19 Score=121.92 Aligned_cols=76 Identities=18% Similarity=0.416 Sum_probs=72.2
Q ss_pred eEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEeeecC
Q 022077 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS 161 (303)
Q Consensus 83 ~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~~~~ 161 (303)
+|||+|||+++++++|+++|++||.|.++++..++ +|+++|||||+|.+.++|.+|++.|||..+ .++.|+|.++.
T Consensus 2 rl~V~nLp~~~~~~~l~~~F~~~G~v~~~~i~~~~-~g~~~g~afV~f~~~~~A~~Ai~~l~g~~l--~g~~l~V~~a~ 77 (78)
T d1no8a_ 2 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDR-SGRSLGTADVHFERKADALKAMKQYNGVPL--DGRPMNIQLVT 77 (78)
T ss_dssp EEEEESCCTTCCHHHHHHHHHHHSCEEEEEESCSS-CCCSCCEEEEEESCHHHHHHHHHHHTTCEE--TTEECEEEEEC
T ss_pred EEEEECCCCCCCHHHHHHHHHHhCCCeEEEEEEee-ccccceeEEEEECCHHHHHHHHHHhCCCEE--CCEEEEEEEee
Confidence 69999999999999999999999999999999987 799999999999999999999999999999 78999998875
No 73
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=4.7e-19 Score=121.89 Aligned_cols=78 Identities=19% Similarity=0.392 Sum_probs=71.2
Q ss_pred CCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEeec
Q 022077 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251 (303)
Q Consensus 172 ~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~~~ 251 (303)
..++|||+|||.++++++|+++|+ .||.|..+.+.. ++|||||+|.+.++|.+|+..|||..|+|+.|+|.|+
T Consensus 7 ~~k~l~V~nLp~~~te~~l~~~F~-~~g~i~~~~~~~------~rg~afV~f~~~~~A~~Ai~~l~~~~i~g~~i~V~~a 79 (86)
T d2cpda1 7 SVKILYVRNLMLSTSEEMIEKEFN-NIKPGAVERVKK------IRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLA 79 (86)
T ss_dssp CCCEEEEESCCTTCCHHHHHHHHH-TTSTTCEEEEEE------CSSEEEEEESSHHHHHHHHHHHSSEEETTEEEEEECC
T ss_pred CCCEEEEcCCCCCCCHHHHHHhhc-ccceeeeEEEcc------ccEEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEec
Confidence 357899999999999999999998 999998887743 4789999999999999999999999999999999999
Q ss_pred ccCCC
Q 022077 252 TNKKT 256 (303)
Q Consensus 252 ~~~~~ 256 (303)
+++..
T Consensus 80 kP~~~ 84 (86)
T d2cpda1 80 KPVDK 84 (86)
T ss_dssp CCCCC
T ss_pred cCCCC
Confidence 87654
No 74
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=7.1e-20 Score=129.56 Aligned_cols=80 Identities=16% Similarity=0.303 Sum_probs=74.6
Q ss_pred CCcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEee
Q 022077 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLN 158 (303)
Q Consensus 79 ~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~ 158 (303)
...++|||+||+.++|+++|+++|+.||.|.++.+++++.+|+++|||||+|.+.++|.+|++ |+|..| .|+.|+|.
T Consensus 16 ~~~~tifV~nL~~~~te~~l~~~F~~~G~V~~v~i~~d~~tg~~kG~afV~F~~~e~a~~A~~-l~g~~~--~G~~l~V~ 92 (101)
T d2cq4a1 16 RDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIG-LTGQRL--LGVPIIVQ 92 (101)
T ss_dssp HHHTEEEEESCCTTCCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHH-HTTEEE--TTEEEEEE
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHcCCCeEEEEEeeecCCCccccceEEEEECCHHHHHHHHH-HCCCEE--CCEEEEEE
Confidence 345799999999999999999999999999999999999999999999999999999999995 999999 78899998
Q ss_pred ecC
Q 022077 159 WAS 161 (303)
Q Consensus 159 ~~~ 161 (303)
++.
T Consensus 93 ~a~ 95 (101)
T d2cq4a1 93 ASQ 95 (101)
T ss_dssp EHH
T ss_pred ECC
Confidence 764
No 75
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=2.3e-19 Score=128.15 Aligned_cols=85 Identities=26% Similarity=0.439 Sum_probs=74.8
Q ss_pred CCCCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeC-CCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEE
Q 022077 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDR-LTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI 248 (303)
Q Consensus 170 ~~~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~-~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v 248 (303)
..+.++|||+||+.++++++|+++|+ .|| +.+++++.+. .+++++|||||+|.+.++|++|+ .||+..|+|+.|+|
T Consensus 12 ~~p~~~v~V~nLp~~~te~~l~~~f~-~~g-~~~~~~~~~~~~~g~~~g~afV~f~~~e~a~~~~-~~~~~~~~gr~l~V 88 (104)
T d1wi8a_ 12 KSPPYTAFLGNLPYDVTEESIKEFFR-GLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSAL-SLNEESLGNKRIRV 88 (104)
T ss_dssp SSSCEEEEEESCCSSCCHHHHHHHTT-TSC-EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHH-GGGTCEETTEECEE
T ss_pred CCCCCEEEEeCCCCcCCHHHHHHHHH-Hhc-cccceeeeeeccCCCcceeeeEEECCHHHHHHHH-HcCCCEECCEEEEE
Confidence 45678999999999999999999998 998 7788877765 46788999999999999998776 59999999999999
Q ss_pred eecccCCCC
Q 022077 249 GPATNKKTV 257 (303)
Q Consensus 249 ~~~~~~~~~ 257 (303)
.|+..++..
T Consensus 89 ~~a~~~~~~ 97 (104)
T d1wi8a_ 89 DVADQAQDK 97 (104)
T ss_dssp EECCCCCCC
T ss_pred EECCCCCCC
Confidence 999887654
No 76
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=2.2e-19 Score=128.96 Aligned_cols=84 Identities=15% Similarity=0.169 Sum_probs=74.7
Q ss_pred CCCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCcee--CCeeeEE
Q 022077 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC--STRPMRI 248 (303)
Q Consensus 171 ~~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~--~g~~l~v 248 (303)
.+..+|||+||++++++++|+++|+ +||.|+++.++.++ .+|+|||+|++.++|.+|+..|||..| .++.|+|
T Consensus 5 s~~~~v~V~NL~~~vte~~L~~~F~-~~G~i~~~~i~~~~----~~g~aFV~f~~~e~A~~Ai~~ln~~~l~~~~~~l~v 79 (108)
T d2adba1 5 SPVLRIIVENLFYPVTLDVLHQIFS-KFGTVLKIITFTKN----NQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRI 79 (108)
T ss_dssp CCEEEEESCSCCSTTHHHHHHHHHT-TTSCEEEEEEEEET----TEEEEEEEESCHHHHHHHHHHHHSCCSSTTCCCCEE
T ss_pred CCeEEEEEeCcCCCCCHHHHHHHHc-cCCcEEEEEEEeeC----CCCeEEEEECCHHHHHHHHHHHCCCEeccCCcEEEE
Confidence 3456899999999999999999998 99999999999874 489999999999999999999999998 6889999
Q ss_pred eecccCCCCCC
Q 022077 249 GPATNKKTVSG 259 (303)
Q Consensus 249 ~~~~~~~~~~~ 259 (303)
.|++.+.....
T Consensus 80 ~~s~~~~~~~~ 90 (108)
T d2adba1 80 DFSKLTSLNVK 90 (108)
T ss_dssp EECSSCSCCCC
T ss_pred EecCCcccccc
Confidence 99987665433
No 77
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=1.7e-19 Score=120.56 Aligned_cols=75 Identities=23% Similarity=0.418 Sum_probs=69.5
Q ss_pred eEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEeeec
Q 022077 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWA 160 (303)
Q Consensus 83 ~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~~~ 160 (303)
+|||+|||+++|+++|+++|++||.|.++.+.+++.+|+++|||||+|.+.++|++|++ +++..+ .|+.|+|..|
T Consensus 1 klfV~nl~~~~te~~l~~~F~~~G~i~~~~i~~d~~t~~~kg~afV~f~~~~~a~~Al~-~~~~~l--~Gr~i~V~rA 75 (75)
T d1hd0a_ 1 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMD-QKEHKL--NGKVIDPKRA 75 (75)
T ss_dssp CEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCBTTTTBCCSEEEEEESSHHHHHHHHH-TCCCCB--TTBCCEECCC
T ss_pred CEEEeCCCCcCCHHHHHHHHHhhccccccccccCCCCCCcCceEEEEECCHHHHHHHHh-cCCCEE--CCCEEEeeEC
Confidence 58999999999999999999999999999999999999999999999999999999996 688888 6788887653
No 78
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=3.4e-19 Score=122.08 Aligned_cols=77 Identities=13% Similarity=0.086 Sum_probs=72.3
Q ss_pred CceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEeecc
Q 022077 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252 (303)
Q Consensus 173 ~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~~~~ 252 (303)
.++|||+|||.++++++|+++|+ .||.|.++++..+. +|+++|||||+|.+.++|.+|++ ++|..+.|+.|+|.|..
T Consensus 6 ~rtvfV~nlp~~~te~~l~~~F~-~~G~v~~v~l~~~~-~~~~kG~afV~f~~~e~a~~al~-~~~~~~~g~~l~v~~~~ 82 (85)
T d1zh5a2 6 NRSVYIKGFPTDATLDDIKEWLE-DKGQVLNIQMRRTL-HKAFKGSIFVVFDSIESAKKFVE-TPGQKYKETDLLILFKD 82 (85)
T ss_dssp TTEEEEECCCTTCCHHHHHHHHT-TSCCEEEEEEEECT-TCCEEEEEEEEESCHHHHHHHHT-CCCCEETTEECEEEEGG
T ss_pred cCEEEEECCCCCCCHHHHHHHHH-Hhcccccceeeeec-cCCcceEEEEEEcCHHHHHHHHH-HCCCEECCEEEEEEEcC
Confidence 57899999999999999999998 99999999998875 88999999999999999999996 69999999999999865
No 79
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.79 E-value=2.7e-19 Score=123.19 Aligned_cols=80 Identities=18% Similarity=0.202 Sum_probs=72.2
Q ss_pred CCCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEee
Q 022077 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250 (303)
Q Consensus 171 ~~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~~ 250 (303)
....+|||+|||.+++++||+++|+ .||.+....++.+..+++++|+|||+|.+.++|.+|+..|||..++||.|+|++
T Consensus 7 p~~~~l~v~nLp~~~~~~di~~~F~-~~~~~~~~~~~~~~~~g~~~G~afV~f~~~e~a~~Ai~~l~~~~l~gr~i~v~l 85 (86)
T d2cqpa1 7 PGPTIIKVQNMPFTVSIDEILDFFY-GYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVKLVL 85 (86)
T ss_dssp CSSEEEEEESCCTTCCHHHHHHHTT-TSCCCTTTCEEEECSSSCEEEEEEEEESCHHHHHHHHHHTTTCEETTEECEEEE
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHh-hcccceeEEEEEeCCCCCcceEEEEEEcCcHHHHHHHHHcCCCEECCEEEEEEE
Confidence 3456799999999999999999998 999998755555556899999999999999999999999999999999999987
Q ss_pred c
Q 022077 251 A 251 (303)
Q Consensus 251 ~ 251 (303)
+
T Consensus 86 ~ 86 (86)
T d2cqpa1 86 G 86 (86)
T ss_dssp S
T ss_pred C
Confidence 5
No 80
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=1.4e-19 Score=127.19 Aligned_cols=85 Identities=12% Similarity=0.164 Sum_probs=75.1
Q ss_pred CceEEEcCCCcccCHHHHHHHHhhhCCC-cceEEEEeeC-CCCCceeEEEEEeCCHHHHHHHHHHhCC--ceeCCeeeEE
Q 022077 173 DHTIFVGDLAADVTDYMLQETFRARYPS-TKGAKVVIDR-LTGRTKGYGFVRFGDESEQLRAMTEMNG--VFCSTRPMRI 248 (303)
Q Consensus 173 ~~~l~v~nl~~~~~~~~l~~~f~~~~G~-i~~~~i~~~~-~~~~~~g~afV~f~~~~~A~~A~~~l~g--~~~~g~~l~v 248 (303)
.++|||+|||.++++++|+++|+ .||. |.+++++.+. .+++++|||||+|.+.++|.+|++.|++ ..++|+.|+|
T Consensus 1 n~rLyV~nLp~~~te~~l~~~f~-~~g~~i~~v~~~~~~~~~~~~rg~aFV~F~~~~~A~~Ai~~l~~~~~~~~g~~i~V 79 (96)
T d2disa1 1 NCRLFIGGIPKMKKREEILEEIA-KVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAV 79 (96)
T ss_dssp SEEEEEECCCTTSCHHHHHHHHH-HHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTTTTTCCSCBTTBCCEE
T ss_pred CCEEEEcCCCCcCCHHHHHHHHH-HhCCcceEEEEeeeccccccCCCeEEEEEcCHHHHHHHHHHHcCCCeEECCEEEEE
Confidence 36899999999999999999998 9995 8999998875 4688999999999999999999999964 4568999999
Q ss_pred eecccCCCCC
Q 022077 249 GPATNKKTVS 258 (303)
Q Consensus 249 ~~~~~~~~~~ 258 (303)
.|++++....
T Consensus 80 ~~A~p~~~~~ 89 (96)
T d2disa1 80 DWAEPEIDVD 89 (96)
T ss_dssp EESCSSCSTT
T ss_pred EEcCCCCCCC
Confidence 9998876553
No 81
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.79 E-value=1.1e-19 Score=123.74 Aligned_cols=78 Identities=12% Similarity=0.215 Sum_probs=67.8
Q ss_pred ceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEeeecC
Q 022077 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS 161 (303)
Q Consensus 82 ~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~~~~ 161 (303)
++|||+|||+++|+++|+++|++||.|..+.++.+..+|+++|||||+|.+.++|.+|++.|||..+ .|+.|+|.++.
T Consensus 2 ~tl~v~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~e~A~~Ai~~l~g~~~--~g~~i~V~~a~ 79 (81)
T d2ghpa1 2 CTLWMTNFPPSYTQRNIRDLLQDINVVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCVEKLNGLKI--EGYTLVTKVSN 79 (81)
T ss_dssp CEEEEECCCTTCCHHHHHHHHHHTTCCCCEEECC-------CCEEEEECSSHHHHHHHHHHHTTCEE--TTEECEEEECC
T ss_pred cEEEEECCCCcCCHHHHHHHHHHhCcEEeeeeecccccccccceeEEEECCHHHHHHHHHHhCCCEE--CCEEEEEEEcc
Confidence 7999999999999999999999999999888888888899999999999999999999999999999 88999999875
No 82
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=2.5e-19 Score=123.83 Aligned_cols=79 Identities=11% Similarity=0.263 Sum_probs=70.8
Q ss_pred CCCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCcee-CCeeeEEe
Q 022077 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC-STRPMRIG 249 (303)
Q Consensus 171 ~~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~-~g~~l~v~ 249 (303)
.++++|||+|||.++++++|+++|+ .||.|.++.+..+ +.+|||||+|++.++|.+|+..|||..+ +|+.|+|+
T Consensus 8 pPs~tL~V~NLp~~~te~~l~~~F~-~~G~v~~~~~~~~----~~~~~afV~f~~~~~A~~A~~~l~~~~i~~g~~l~v~ 82 (88)
T d2adca2 8 PPSATLHLSNIPPSVSEEDLKVLFS-SNGGVVKGFKFFQ----KDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVS 82 (88)
T ss_dssp CSCSEEEEECCCTTCCHHHHHHHHH-TTSCCEEEEEECS----SSTTCEEEEESSHHHHHHHHHHHTTCBSSSSCBCEEE
T ss_pred CCCCEEEEECCCCCCCHHHHHHHhh-ccCCEEEEEEeee----cccceeEEEECCHHHHHHHHHhccCCEecCCCEEEEE
Confidence 4678999999999999999999998 9999988877644 3478999999999999999999999998 58999999
Q ss_pred ecccC
Q 022077 250 PATNK 254 (303)
Q Consensus 250 ~~~~~ 254 (303)
|++.+
T Consensus 83 ~sk~~ 87 (88)
T d2adca2 83 FSKST 87 (88)
T ss_dssp ECSSC
T ss_pred eCCCC
Confidence 99753
No 83
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=4.5e-19 Score=122.62 Aligned_cols=81 Identities=21% Similarity=0.331 Sum_probs=73.5
Q ss_pred CCcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEee
Q 022077 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLN 158 (303)
Q Consensus 79 ~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~ 158 (303)
...++|||+|||+++|+++|+++|+.||.|.++++++++.+|+++|||||+|.+.++|.+|++. +..+ .|+.|+|.
T Consensus 6 ~~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~srG~aFV~f~~~~~a~~al~~--~~~l--~Gr~i~v~ 81 (90)
T d2cqga1 6 QKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQ--RHMI--DGRWCDCK 81 (90)
T ss_dssp CCCCCEEEESCCSSCCHHHHHHHHGGGSCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHS--CEEE--TTEEEEEE
T ss_pred cCCCeEEEECCCCCCCHHHHHHHHHhhcccceeeeccCCCCcccCCEEEEEECCHHHHHHHHhc--CCcc--CCEEeEEE
Confidence 4567899999999999999999999999999999999999999999999999999999999974 4456 68899999
Q ss_pred ecCCC
Q 022077 159 WASFG 163 (303)
Q Consensus 159 ~~~~~ 163 (303)
++...
T Consensus 82 ~a~~k 86 (90)
T d2cqga1 82 LPNSK 86 (90)
T ss_dssp CCCTT
T ss_pred eCCCC
Confidence 88654
No 84
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=2.4e-19 Score=126.12 Aligned_cols=78 Identities=23% Similarity=0.423 Sum_probs=69.8
Q ss_pred CCCCceEEEcCCC-cccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEE
Q 022077 170 DTPDHTIFVGDLA-ADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI 248 (303)
Q Consensus 170 ~~~~~~l~v~nl~-~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v 248 (303)
....++|||+||+ ..+++++|+++|+ +||.|++++|. +|||||+|++.++|.+|++.|||..|.|+.|+|
T Consensus 12 ~~~~~~lfV~nL~~~~~~~~~L~~~F~-~~G~i~~~~i~--------rg~aFV~f~~~~~A~~Ai~~lng~~~~g~~l~V 82 (98)
T d1wf2a_ 12 RSMNSRVFIGNLNTLVVKKSDVEAIFS-KYGKIVGCSVH--------KGFAFVQYVNERNARAAVAGEDGRMIAGQVLDI 82 (98)
T ss_dssp SSCCCCEEEEEECTTTCCHHHHHHSST-TSSCEEEEEEE--------TEEEEEEESSHHHHHHHHHTTTTCEETTEECEE
T ss_pred CCCCcEEEEeCCCcccCCHHHHHHHHh-hcCCEEEEEEe--------CCeEEEEECCHHHHHHHHHHcCCCEECCEEEEE
Confidence 3445789999997 5688899999998 99999999982 789999999999999999999999999999999
Q ss_pred eecccCCC
Q 022077 249 GPATNKKT 256 (303)
Q Consensus 249 ~~~~~~~~ 256 (303)
.|++.++.
T Consensus 83 ~~a~~~~~ 90 (98)
T d1wf2a_ 83 NLAAEPKV 90 (98)
T ss_dssp EETTSCCC
T ss_pred EECCCCCC
Confidence 99987543
No 85
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.78 E-value=3.6e-19 Score=122.21 Aligned_cols=77 Identities=19% Similarity=0.452 Sum_probs=71.4
Q ss_pred EEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCC---CcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEeeec
Q 022077 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTG---QIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWA 160 (303)
Q Consensus 84 l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~---~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~~~ 160 (303)
|||+|||+++|+++|+++|++||.|.++.+.+++.++ +++|||||+|.+.++|.+|++.|+|..+ .++.|+|.|+
T Consensus 1 LfV~nLp~~~t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~~~kG~afV~f~~~~~A~~A~~~~~~~~~--~g~~i~V~~a 78 (85)
T d2cpfa1 1 LFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTV--DGHKLEVRIS 78 (85)
T ss_dssp EEEESCCTTCCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCEE--TTEECEEECS
T ss_pred CEEcCCCCCCCHHHHHHHHHHhCCccccceecccccccccccceEEEEEECCHHHHHHHHHHhCCCEE--CCEEEEEEEC
Confidence 7999999999999999999999999999999887655 5789999999999999999999999999 7899999998
Q ss_pred CC
Q 022077 161 SF 162 (303)
Q Consensus 161 ~~ 162 (303)
..
T Consensus 79 ~~ 80 (85)
T d2cpfa1 79 ER 80 (85)
T ss_dssp SC
T ss_pred CC
Confidence 64
No 86
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=2.6e-19 Score=120.99 Aligned_cols=74 Identities=16% Similarity=0.281 Sum_probs=68.3
Q ss_pred CCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEeec
Q 022077 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251 (303)
Q Consensus 172 ~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~~~ 251 (303)
.+++|||+|++ +++++|+++|+ +||.|.++++.++ +|||||+|++.++|.+|+..|||..++|+.|+|.|+
T Consensus 4 ~~~ti~V~~~~--~te~~L~~~F~-~~G~I~~v~~~~~------~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a 74 (79)
T d2bz2a1 4 KGNTLYVYGED--MTPTLLRGAFS-PFGNIIDLSMDPP------RNCAFVTYEKMESADQAVAELNGTQVESVQLKVNIA 74 (79)
T ss_dssp CCCEEEEECSS--CCHHHHHHHHS-TTCCCSCEEEETT------TTEEEEECSSHHHHHHHHHHHTTCBCSSCBCEEEEC
T ss_pred CCCEEEEECCC--CCHHHHHHHHh-ccCccceeeeccC------CCEEEEEEcccHHHHHHHHHhCCCEECCEEEEEEEe
Confidence 46799999985 89999999998 9999999998654 679999999999999999999999999999999999
Q ss_pred ccC
Q 022077 252 TNK 254 (303)
Q Consensus 252 ~~~ 254 (303)
+++
T Consensus 75 ~~~ 77 (79)
T d2bz2a1 75 RKQ 77 (79)
T ss_dssp CSS
T ss_pred cCC
Confidence 865
No 87
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=2.8e-19 Score=128.87 Aligned_cols=78 Identities=23% Similarity=0.388 Sum_probs=71.4
Q ss_pred CceEEEcCCC-cccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEeec
Q 022077 173 DHTIFVGDLA-ADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251 (303)
Q Consensus 173 ~~~l~v~nl~-~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~~~ 251 (303)
+++|||+||+ ..+++++|+++|+ .||.|++|+|++++ +|||||+|++.++|.+|++.|||..|.|+.|+|.|+
T Consensus 2 ~~~l~V~nL~p~~~te~~L~~~F~-~fG~I~~v~i~~~~-----kg~afV~f~~~~~A~~ai~~lng~~l~g~~l~v~~s 75 (109)
T d2adca1 2 NSVLLVSNLNPERVTPQSLFILFG-VYGDVQRVKILFNK-----KENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLS 75 (109)
T ss_dssp CSEEEEESCCTTTCCHHHHHHHHH-HHTCEEEEEECCTT-----SCCEEEEESCHHHHHHHHHHHTTCBCSSSBCEEECC
T ss_pred CCEEEEeCCCcccCCHHHHHHHHh-hccccceEEEEecc-----cceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEC
Confidence 5799999995 4699999999998 99999999998774 789999999999999999999999999999999998
Q ss_pred ccCCC
Q 022077 252 TNKKT 256 (303)
Q Consensus 252 ~~~~~ 256 (303)
+.+..
T Consensus 76 ~~~~~ 80 (109)
T d2adca1 76 KHQNV 80 (109)
T ss_dssp SCCCC
T ss_pred CCCCC
Confidence 76543
No 88
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=2e-19 Score=122.98 Aligned_cols=78 Identities=27% Similarity=0.523 Sum_probs=72.4
Q ss_pred EEEcCCCccCCHHHHHHHHhhcCCceE-EEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEeeecCC
Q 022077 84 LWIGDLQYWMDETYLNTCFAHTGEVVA-VKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASF 162 (303)
Q Consensus 84 l~v~nLp~~~t~~~l~~~f~~~g~i~~-~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~~~~~ 162 (303)
|||+|||.++|+++|+++|++||.|.+ +.+++++.+|+++|||||+|.+.++|.+|++.|+|..+ .++.|+|.|+..
T Consensus 1 lfV~nLp~~~te~~l~~~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~g~~~--~gr~l~v~~a~~ 78 (83)
T d1x5ta1 1 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYL--CNRPITVSYAFK 78 (83)
T ss_dssp EEEECCCTTCCHHHHHHHHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHTTTTCEE--TTEECEEEESCC
T ss_pred CEEcCCCCcCcHHHHHHHHHHhCceeeeEEEEeeccccccCceEEEEECCHHHHHHHHHhCCCcEE--CCEEEEEEEecC
Confidence 799999999999999999999999865 47888888999999999999999999999999999999 789999999874
Q ss_pred C
Q 022077 163 G 163 (303)
Q Consensus 163 ~ 163 (303)
.
T Consensus 79 k 79 (83)
T d1x5ta1 79 K 79 (83)
T ss_dssp C
T ss_pred C
Confidence 3
No 89
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.78 E-value=8.7e-19 Score=123.77 Aligned_cols=86 Identities=19% Similarity=0.309 Sum_probs=75.9
Q ss_pred CCCcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCC----CCCc
Q 022077 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMP----NGEQ 153 (303)
Q Consensus 78 ~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~----~~~~ 153 (303)
..+.++|||+|||+++|+++|+++|++||.|.++.+..++.++.++|||||+|.+.++|.+|++.|++.... ..|+
T Consensus 5 ~~~~~tlfV~nLp~~~te~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~F~~~~~a~~ai~~l~~~~~~~g~~~~gr 84 (98)
T d1x4ha1 5 VTEGKTVFIRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKLDGR 84 (98)
T ss_dssp CCCCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHHHCTTTTTCCEESSSC
T ss_pred CCCCCEEEEcCCCCcCCHHHHHHHHhccccceeeeeccccccccccceEEEEEcCHHHHHHHHHHcccccccCCcEECCE
Confidence 356789999999999999999999999999999999999989999999999999999999999998754321 2688
Q ss_pred eeEeeecCCC
Q 022077 154 NFRLNWASFG 163 (303)
Q Consensus 154 ~i~v~~~~~~ 163 (303)
.|+|.|+...
T Consensus 85 ~l~v~~a~~k 94 (98)
T d1x4ha1 85 QLKVDLAVTR 94 (98)
T ss_dssp EEEEECCCCC
T ss_pred EEEEEECCCC
Confidence 9999998743
No 90
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.77 E-value=3.3e-19 Score=123.25 Aligned_cols=77 Identities=17% Similarity=0.284 Sum_probs=70.2
Q ss_pred CCceEEEcCCCcccCHHHH---HHHHhhhCCCcceEEEEeeCCCCCc---eeEEEEEeCCHHHHHHHHHHhCCceeCCee
Q 022077 172 PDHTIFVGDLAADVTDYML---QETFRARYPSTKGAKVVIDRLTGRT---KGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245 (303)
Q Consensus 172 ~~~~l~v~nl~~~~~~~~l---~~~f~~~~G~i~~~~i~~~~~~~~~---~g~afV~f~~~~~A~~A~~~l~g~~~~g~~ 245 (303)
..++|||+|||.++++++| +++|+ +||.|.+|.|.+++.++.+ +|||||+|++.++|.+|++.|||..++|+.
T Consensus 7 q~n~vyV~nLp~~~t~~~l~~~~e~F~-~~G~I~~v~i~~~~~~~~~~~~~g~aFV~f~~~~~A~~Ai~~lng~~~~gr~ 85 (89)
T d2cpia1 7 QKNLVFVVGLSQRLADPEVLKRPEYFG-KFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGRT 85 (89)
T ss_dssp CSSCEEEEEECTTTCCHHHHHSTTTTT-TTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEETTEE
T ss_pred ecCEEEEECCCCccCHHHHHHHHHHhc-ccCCceEEEEeeccCcCCCCCcceEEEEecccchhHHHHHHHhCCCEECCEE
Confidence 4568999999999999999 67898 9999999999999866554 489999999999999999999999999999
Q ss_pred eEEe
Q 022077 246 MRIG 249 (303)
Q Consensus 246 l~v~ 249 (303)
|+|+
T Consensus 86 lkvS 89 (89)
T d2cpia1 86 LKAS 89 (89)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 9985
No 91
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=2.1e-19 Score=124.98 Aligned_cols=81 Identities=27% Similarity=0.447 Sum_probs=72.1
Q ss_pred CCceEEEcCCCcccCHHHHHH----HHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeE
Q 022077 172 PDHTIFVGDLAADVTDYMLQE----TFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMR 247 (303)
Q Consensus 172 ~~~~l~v~nl~~~~~~~~l~~----~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~ 247 (303)
++++|||+||+.+++++||++ +|+ .||.|.+|++.. +++++|||||+|++.++|.+|++.|||..++|+.|+
T Consensus 2 P~~tl~V~nLp~~~t~~dl~~~l~~~f~-~~G~i~~i~~~~---~~~~~g~afV~F~~~~~A~~A~~~~~~~~~~g~~l~ 77 (91)
T d1nu4a_ 2 PNHTIYINNLNEKIKKDELKKSLHAIFS-RFGQILDILVSR---SLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMR 77 (91)
T ss_dssp CCSEEEEESCCTTSCHHHHHHHHHHHHG-GGSCEEEEECCH---HHHHTTCEEEEESSHHHHHHHHHHHTTCEETTEECE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHhc-ccccccceEEee---eccCCCceEEEECCHHHHHHHHHHhCCCEECCEEEE
Confidence 468999999999999998864 577 999999988754 356789999999999999999999999999999999
Q ss_pred EeecccCCC
Q 022077 248 IGPATNKKT 256 (303)
Q Consensus 248 v~~~~~~~~ 256 (303)
|.|++.+.+
T Consensus 78 v~~ak~~~~ 86 (91)
T d1nu4a_ 78 IQYAKTDSD 86 (91)
T ss_dssp EEECSSCCT
T ss_pred EEEeCCCch
Confidence 999987653
No 92
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=9.1e-19 Score=118.46 Aligned_cols=77 Identities=14% Similarity=0.427 Sum_probs=71.9
Q ss_pred cceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEeeec
Q 022077 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWA 160 (303)
Q Consensus 81 ~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~~~ 160 (303)
.++|||||||+++|+++|+++|++||.|..+.+..++.++.++|||||+|.+.++|.+|++ ++|..| .|+.|+|.+|
T Consensus 2 ~r~lfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~e~~~~al~-~~~~~l--~Gr~i~V~~A 78 (79)
T d1l3ka2 2 VKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTV--NGHNCEVRKA 78 (79)
T ss_dssp CSEEEEECCTTTCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-CSCCEE--TTEECEEEEC
T ss_pred CCEEEECCCCCcCCHHHHHHHHHHhccccccccccCCCCcccccEEEEEEcCHHHHHHHHH-hCCCEE--CCEEEEEEEC
Confidence 4789999999999999999999999999999999999999999999999999999999995 899999 7788888865
No 93
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=1e-19 Score=120.88 Aligned_cols=71 Identities=25% Similarity=0.448 Sum_probs=68.6
Q ss_pred EEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeE
Q 022077 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMR 247 (303)
Q Consensus 176 l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~ 247 (303)
|||+|||.++++++|+++|+ .||.|..+++..+..++.++|+|||+|.+.++|.+|+..|||..+.|+.|+
T Consensus 1 lyV~nLp~~~te~~l~~~F~-~~G~v~~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~~~Gr~~k 71 (72)
T d1x4ea1 1 LYIRGLQPGTTDQDLVKLCQ-PYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKASGVQAQMAK 71 (72)
T ss_dssp EEEESCCTTCCHHHHHTTST-TTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHHHHHHTCCEESCC
T ss_pred CEEeCCCCcCCHHHHHHHHh-hhccccccccccccccccccceeEEEECCHHHHHHHHHHhCCCEECCEECc
Confidence 79999999999999999998 999999999999998999999999999999999999999999999999874
No 94
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=1.2e-18 Score=124.21 Aligned_cols=88 Identities=15% Similarity=0.170 Sum_probs=78.5
Q ss_pred CCCCCCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeE
Q 022077 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMR 247 (303)
Q Consensus 168 ~~~~~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~ 247 (303)
.......+|||+|||++++++||+++|+ .+|.|..+.++.+..+++++|||||+|.+.++|++|++ +|+..|+||.|+
T Consensus 10 ~~~~~~~~v~v~nLP~~~te~dI~~~F~-~~g~v~~~v~~~~~~~~~~kG~afV~F~~~e~a~~a~~-~~~~~i~gR~i~ 87 (104)
T d1wg5a_ 10 PDTANDGFVRLRGLPFGCSKEEIVQFFS-GLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALK-KHKERIGHRYIE 87 (104)
T ss_dssp SSCSCCCEEEEESCCTTCCHHHHHHHTT-TCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHT-TTTCCSSSSCCE
T ss_pred CCCCCCcEEEEeCCCCCCCHHHHHHHHH-hcCCceEEEEEEeCCCCCcceEEEEEeCCHHHHHHHHh-hCCCEEcceEEE
Confidence 4455667899999999999999999998 99999887777777789999999999999999999986 899999999999
Q ss_pred EeecccCCCC
Q 022077 248 IGPATNKKTV 257 (303)
Q Consensus 248 v~~~~~~~~~ 257 (303)
|.+++.++..
T Consensus 88 V~~~~~~~~~ 97 (104)
T d1wg5a_ 88 IFKSSRAEVR 97 (104)
T ss_dssp EEEECTTTSC
T ss_pred EEECCHHHhc
Confidence 9999877644
No 95
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=5.7e-19 Score=125.20 Aligned_cols=82 Identities=21% Similarity=0.375 Sum_probs=75.4
Q ss_pred CCcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEee
Q 022077 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLN 158 (303)
Q Consensus 79 ~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~ 158 (303)
...++|||+|||+++|+++|+++|++||.|.++.+.+++.++.++|||||+|.+.++|.+|++ ++|..| .|+.|+|.
T Consensus 18 ~~~~~lfVgnLp~~~te~~L~~~F~~~G~i~~~~i~~d~~~~~~kg~aFV~f~~~~~a~~al~-~~~~~l--~G~~i~V~ 94 (103)
T d1x4ba1 18 EQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSI--DGRVVEPK 94 (103)
T ss_dssp HHHTEEEEECCTTCCCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHT-SCSEEE--TTEEEEEE
T ss_pred CCCCEEEEeCCCCcCCHHHHHHHHHhhCcccceeecccccCCCccCeEEEEECCHHHHHHHHH-hCCCeE--CCEEEEEE
Confidence 345799999999999999999999999999999999999999999999999999999999995 788888 78999999
Q ss_pred ecCCC
Q 022077 159 WASFG 163 (303)
Q Consensus 159 ~~~~~ 163 (303)
++...
T Consensus 95 ~a~~k 99 (103)
T d1x4ba1 95 RAVAR 99 (103)
T ss_dssp CCSSC
T ss_pred ECccc
Confidence 88743
No 96
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.77 E-value=1e-18 Score=122.87 Aligned_cols=80 Identities=19% Similarity=0.358 Sum_probs=72.0
Q ss_pred CCCCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCC--eeeE
Q 022077 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCST--RPMR 247 (303)
Q Consensus 170 ~~~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g--~~l~ 247 (303)
..++++|||+||+.++++++|+++|+ +||.|+++++.++ ++||||+|.+.++|.+|++.|||..|.| +.|+
T Consensus 14 ~~Ps~tl~V~nLp~~~t~~~l~~~f~-~~G~i~~~~~~~~------~~~afV~f~~~~~A~~A~~~l~~~~i~g~~~~l~ 86 (97)
T d1whya_ 14 ANPTTRLWVGGLGPNTSLAALAREFD-RFGSIRTIDHVKG------DSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLR 86 (97)
T ss_dssp CCCCSCEEEECCCSSCCHHHHHHHHH-TTSCEEEEEECSS------SCCEEEEESSHHHHHHHHHHHTTCBCSSSSCBCE
T ss_pred CCCCCEEEEcCCCCCCCHHHHHHHHH-hhcccceEeeecc------ccEEEeccCCHHHHHHHHHHhCCCEeCCCceEEE
Confidence 35678999999999999999999998 9999999998654 6799999999999999999999999976 5899
Q ss_pred EeecccCCC
Q 022077 248 IGPATNKKT 256 (303)
Q Consensus 248 v~~~~~~~~ 256 (303)
|.|++.+..
T Consensus 87 v~~ak~~~~ 95 (97)
T d1whya_ 87 VDFAKSGPS 95 (97)
T ss_dssp EEECCCCCC
T ss_pred EEeCCCCCC
Confidence 999987653
No 97
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=1.2e-18 Score=120.27 Aligned_cols=81 Identities=14% Similarity=0.216 Sum_probs=72.8
Q ss_pred CCCCCCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHh--CCceeCCee
Q 022077 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEM--NGVFCSTRP 245 (303)
Q Consensus 168 ~~~~~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l--~g~~~~g~~ 245 (303)
....++++|||+||+.++++++|+++|+ .||.|.++++..+ ++||||+|++.++|.+|++.+ ++..++|+.
T Consensus 3 ~~~~Ps~~l~V~nLp~~~t~~~L~~~f~-~~G~i~~v~~~~~------~~~afV~f~~~e~A~~a~~~~~~~~~~~~g~~ 75 (88)
T d2cq1a1 3 MDGAPSRVLHIRKLPGEVTETEVIALGL-PFGKVTNILMLKG------KNQAFLELATEEAAITMVNYYSAVTPHLRNQP 75 (88)
T ss_dssp CCSSCCSEEEEESCCTTCCHHHHHHTTT-TTSCEEEEEEETT------TTEEEEEESSHHHHHHHHHHHHHSCCEETTEE
T ss_pred CCCCCCCEEEEeCCCCCCCHHHHHHHHh-ccccccccccccc------ceEEEEEeCCHHHHHHHHHHHccCCCccCCCE
Confidence 3457889999999999999999999998 9999999998755 579999999999999999866 577899999
Q ss_pred eEEeecccCC
Q 022077 246 MRIGPATNKK 255 (303)
Q Consensus 246 l~v~~~~~~~ 255 (303)
|+|.|++.+.
T Consensus 76 l~v~~sk~~~ 85 (88)
T d2cq1a1 76 IYIQYSNHKE 85 (88)
T ss_dssp CEEEECSCSS
T ss_pred EEEEECCCCC
Confidence 9999998765
No 98
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=4.2e-19 Score=118.31 Aligned_cols=74 Identities=18% Similarity=0.342 Sum_probs=67.2
Q ss_pred eEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEeee
Q 022077 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNW 159 (303)
Q Consensus 83 ~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~~ 159 (303)
+|||||||+++|+++|+++|++||.|.++++++++.+++++|||||+|.+.++|++|++ .++..+ .++.++|..
T Consensus 1 klfVgnLp~~~te~~l~~~F~~~G~I~~v~i~~d~~t~~~rG~~FV~f~~~~~a~~al~-~~~~~i--~g~~i~vk~ 74 (75)
T d1x0fa1 1 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME-KKYHNV--GLSKCEIKV 74 (75)
T ss_dssp EEEEESCCSSCCHHHHHHHHHHHSCEEEEECCCCTTTCCTTCCEEEEESSSHHHHHHTT-CSSCCB--TTBCCEEEC
T ss_pred CEEEcCCCCCCCHHHHHHHHHHhCCcccccccccccccccccEEEEEECCHHHHHHHHh-hCCCEE--CCEEeEEEE
Confidence 59999999999999999999999999999999999999999999999999999999996 466777 566777664
No 99
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=3.2e-18 Score=119.31 Aligned_cols=82 Identities=22% Similarity=0.463 Sum_probs=74.7
Q ss_pred CCCcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEe
Q 022077 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRL 157 (303)
Q Consensus 78 ~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v 157 (303)
....++|||+|||.++|+++|+++|+.||.|.++.++.++. .++|||||+|.+.++|.+|++.|+|..+ .|+.|+|
T Consensus 8 ~~~~~~l~v~nLp~~~t~~~L~~~F~~~G~v~~v~~~~~~~--~~kg~afV~f~~~~~a~~Ai~~l~~~~~--~g~~l~V 83 (93)
T d2cq3a1 8 KSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNER--GSKGFGFVTFENSADADRAREKLHGTVV--EGRKIEV 83 (93)
T ss_dssp SCCCCEEEEESCCTTCCHHHHHHHGGGTSCEEEEEEECCTT--TTCCEEEEEESCHHHHHHHHHHHTTCEE--TTEECEE
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHhhcceeeecccccccc--CCcceeEEEECCHHHHHHHHHHcCCCEE--CCEEEEE
Confidence 34567899999999999999999999999999999998863 4689999999999999999999999999 7899999
Q ss_pred eecCCC
Q 022077 158 NWASFG 163 (303)
Q Consensus 158 ~~~~~~ 163 (303)
.|+...
T Consensus 84 ~~A~~r 89 (93)
T d2cq3a1 84 NNATAR 89 (93)
T ss_dssp EECCSS
T ss_pred EecCcC
Confidence 999754
No 100
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=1.1e-18 Score=123.87 Aligned_cols=86 Identities=17% Similarity=0.199 Sum_probs=75.8
Q ss_pred CCCCCCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeE
Q 022077 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMR 247 (303)
Q Consensus 168 ~~~~~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~ 247 (303)
.......+|||+|||++++++||+++|+ .|| +.++.++.+. ++..+|||||+|++.++|++|++ ||+..|+||.|+
T Consensus 10 ~~~~~~~~v~v~nLp~~~te~dl~~~F~-~~~-~~~v~~~~~~-~g~~~G~afVeF~~~~~a~~Al~-~~~~~i~gR~I~ 85 (102)
T d1weza_ 10 FQSTTGHCVHMRGLPYRATENDIYNFFS-PLN-PMRVHIEIGP-DGRVTGEADVEFATHEDAVAAMA-KDKANMQHRYVE 85 (102)
T ss_dssp CCCSSSCEEEEESCCTTCCHHHHHHSSC-SCC-CSEEEEEESS-SSCEEEEEEEECSSSHHHHHHHT-TSSCCSSSSCCE
T ss_pred CcCCCCCEEEEeCCCCcCCHHHHHHHHh-ccC-cceeeeEEec-CCcceEEEEEEECCHHHHHHHHH-cCCCEECCEEEE
Confidence 3445667999999999999999999998 887 5678888876 68899999999999999999986 899999999999
Q ss_pred EeecccCCCC
Q 022077 248 IGPATNKKTV 257 (303)
Q Consensus 248 v~~~~~~~~~ 257 (303)
|.|+..+...
T Consensus 86 V~~s~~~~~~ 95 (102)
T d1weza_ 86 LFLNSTAGTS 95 (102)
T ss_dssp EEEECCCCCC
T ss_pred EEEcCCCCCC
Confidence 9998877644
No 101
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=1.2e-18 Score=120.10 Aligned_cols=78 Identities=15% Similarity=0.184 Sum_probs=68.0
Q ss_pred CCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEeec
Q 022077 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251 (303)
Q Consensus 172 ~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~~~ 251 (303)
.+++|||+|||.+++++||+++|+ .|| +..+.+ +..+|||||+|++.++|.+|++.|||..++|+.|+|+|+
T Consensus 4 ~s~~i~V~nLp~~~t~~~l~~lF~-~~G-~~~~~~------~~~kg~afV~f~~~~~A~~Ai~~ln~~~~~G~~l~V~~a 75 (88)
T d1wg1a_ 4 GSSGILVKNLPQDSNCQEVHDLLK-DYD-LKYCYV------DRNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLIVQLQ 75 (88)
T ss_dssp CCCCEEEESCCSSCCHHHHHHHTC-SSC-CCCEEE------EGGGTEEEECCSCHHHHHHHHHHHTTEEETTEEEEEEEC
T ss_pred CCCEEEEeCCCCccChHHHHHHHH-hcC-ceeeee------eccCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEEc
Confidence 457899999999999999999998 999 333444 345889999999999999999999999999999999999
Q ss_pred ccCCCC
Q 022077 252 TNKKTV 257 (303)
Q Consensus 252 ~~~~~~ 257 (303)
+.+...
T Consensus 76 ~~~~~~ 81 (88)
T d1wg1a_ 76 PTDALL 81 (88)
T ss_dssp CCCCCC
T ss_pred CCCCCC
Confidence 766543
No 102
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.76 E-value=8e-19 Score=117.56 Aligned_cols=75 Identities=20% Similarity=0.323 Sum_probs=70.8
Q ss_pred eEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEeeec
Q 022077 83 TLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWA 160 (303)
Q Consensus 83 ~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~~~ 160 (303)
+|||||||.++|+++|+++|+.||.+..+.+..++.++.++|||||+|.+.++|.+|++ ++|..+ .|+.|+|.+|
T Consensus 1 rlfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~~~afV~F~~~~~a~~al~-~~~~~l--~gr~i~V~~A 75 (75)
T d2msta_ 1 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE-IHFHEI--NNKMVECKKA 75 (75)
T ss_dssp CEEEECCCSSCCHHHHHHHHHTTSCCSEECCBCCTTCTTSCCEEEEECSCHHHHHHHHH-CSSCCB--TTBCCEEEEC
T ss_pred CEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeeccccccCceeEEEECCHHHHHHHHh-cCCCEE--CCeEEEEEEC
Confidence 58999999999999999999999999999999999899999999999999999999996 899999 7888888875
No 103
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=3e-19 Score=122.99 Aligned_cols=76 Identities=16% Similarity=0.109 Sum_probs=69.2
Q ss_pred ceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEeeccc
Q 022077 174 HTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253 (303)
Q Consensus 174 ~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~~~~~ 253 (303)
++|||+|||.++++++|+++|+ .||.|.++++.. +|||||+|++.++|.+|+..|||..|.|+.|+|.+++.
T Consensus 1 nrvfV~nlp~~~~~~~l~~~F~-~~G~v~~~~i~~-------~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~i~v~~~~~ 72 (87)
T d3begb1 1 NRVVVSGLPPSGSWQDLKDHMR-EAGDVCYADVYR-------DGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRV 72 (87)
T ss_dssp CCEEEEECCSSCCTTHHHHHHG-GGSCEEEEEECT-------TSEEEEEESSHHHHHHHHHHHTTCBCCCTTSCCCBCEE
T ss_pred CeEEEECCCCcCCHHHHHHHHh-hhcccccccccc-------cceeeEEeCCHHHHHHHHHHhCCCEECCcEeEEeEEec
Confidence 3699999999999999999998 999999998853 37999999999999999999999999999999999876
Q ss_pred CCCC
Q 022077 254 KKTV 257 (303)
Q Consensus 254 ~~~~ 257 (303)
+...
T Consensus 73 ~~~~ 76 (87)
T d3begb1 73 KVDG 76 (87)
T ss_dssp EECC
T ss_pred CcCC
Confidence 6543
No 104
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=2.6e-18 Score=124.70 Aligned_cols=104 Identities=13% Similarity=0.195 Sum_probs=85.2
Q ss_pred CCcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEee
Q 022077 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLN 158 (303)
Q Consensus 79 ~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~ 158 (303)
..+++|||+|||.++|+++|+++|++||.|.+|++..+ +.++|||||+|.+.++|..|++.|+|..| .|+.|+|.
T Consensus 5 ~~~r~l~V~nLp~~~te~~l~~~F~~~G~v~~i~~~~~---~~~kG~afV~f~~~~~A~~Ai~~l~g~~~--~gr~l~V~ 79 (114)
T d2f9da1 5 EVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNT---PETRGTAYVVYEDIFDAKNACDHLSGFNV--CNRYLVVL 79 (114)
T ss_dssp TCCSEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEECS---TTTTTEEEEEESSHHHHHHHHHHHTTCEE--TTEECEEE
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHhhcCCeEeeccccc---CCcCCeEEEEECCHHHHHHHHHHhCCCEE--CCEEEEEE
Confidence 34689999999999999999999999999999988764 56789999999999999999999999999 78999999
Q ss_pred ecCCCCCCCCCCCCCceEEEcCCCcccCHHHHHHHHhhhCCC
Q 022077 159 WASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPS 200 (303)
Q Consensus 159 ~~~~~~~~~~~~~~~~~l~v~nl~~~~~~~~l~~~f~~~~G~ 200 (303)
|+...... ........++++..+.+ .||.
T Consensus 80 ~a~~~~~~------------~~~~~~~~~~~~~~~~~-~~g~ 108 (114)
T d2f9da1 80 YYNANRAF------------QKMDTKKKEEQLKLLKE-KYGI 108 (114)
T ss_dssp ECCHHHHT------------TTSCHHHHHHHHHHHHH-HHCC
T ss_pred EcCCCchh------------hhhHHHHHHHHHHHHHH-HhCC
Confidence 87532111 12233445677888876 7775
No 105
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.75 E-value=1.1e-18 Score=126.08 Aligned_cols=77 Identities=19% Similarity=0.147 Sum_probs=70.6
Q ss_pred CCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEeec
Q 022077 172 PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251 (303)
Q Consensus 172 ~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~~~ 251 (303)
..++|||+|||.++++++|+++|+ .||.|.+|.|. +.+|||||+|.+.++|.+|++.|||..|.|+.|+|.|+
T Consensus 9 ~~~~l~V~nLp~~~t~~~L~~~F~-~fG~I~~v~l~------~~kg~afV~f~~~~~A~~A~~~lng~~~~gr~l~v~~a 81 (111)
T d1whxa_ 9 SKTVILAKNLPAGTLAAEIQETFS-RFGSLGRVLLP------EGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWA 81 (111)
T ss_dssp EEEEEEEESCCTTCCHHHHHHHHH-TTSCEEEEECC------SSSSCEEEEESCHHHHHHHHHHHTTCBSSSSBCEEEEE
T ss_pred CCCEEEEECCCCCCCHHHHHhhhh-ccCCccEEEee------ccCceEEEEEcCHHHHHHHHHHHcCCccCCCeEEEEEC
Confidence 347899999999999999999998 99999999873 34789999999999999999999999999999999998
Q ss_pred ccCC
Q 022077 252 TNKK 255 (303)
Q Consensus 252 ~~~~ 255 (303)
....
T Consensus 82 ~~~~ 85 (111)
T d1whxa_ 82 PIGV 85 (111)
T ss_dssp ETTT
T ss_pred CCCc
Confidence 7654
No 106
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=2.1e-18 Score=122.46 Aligned_cols=85 Identities=15% Similarity=0.283 Sum_probs=76.3
Q ss_pred CCCCcceEEEcCCCccCCHHHHHHHHhhcCCce--------EEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCC
Q 022077 77 QPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVV--------AVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPM 148 (303)
Q Consensus 77 ~~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~--------~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~ 148 (303)
+....++|||+|||.++|+++|+++|+.||.|. .+.+.+++.+|+++|||||+|.+.++|.+|++.|+|..+
T Consensus 4 ~~~~~~~i~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~d~~~~~~~g~afV~f~~~~~a~~Ai~~l~g~~~ 83 (101)
T d2cpea1 4 EDSDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDF 83 (101)
T ss_dssp CCCCCCEEEEECCCTTCCHHHHHHHHTTTSCBCBCSSSCCBSEECCBCTTTCSBCSEEEEEBSSHHHHHHHHHHHTTCEE
T ss_pred CCCCCCEEEEECCCCcCCHHHHHHHHHHCceEEEeeecccceeEEeeccccccccceeeEEecCHHHHHHHHHHhCCCEE
Confidence 345678999999999999999999999999873 566777888899999999999999999999999999999
Q ss_pred CCCCceeEeeecCCC
Q 022077 149 PNGEQNFRLNWASFG 163 (303)
Q Consensus 149 ~~~~~~i~v~~~~~~ 163 (303)
.|+.|+|.|+...
T Consensus 84 --~gr~i~V~~a~~~ 96 (101)
T d2cpea1 84 --QGSKLKVSLARKK 96 (101)
T ss_dssp --TTEECEEECSSCC
T ss_pred --CCEEEEEEEcCCC
Confidence 8899999998754
No 107
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.75 E-value=2.4e-18 Score=114.72 Aligned_cols=74 Identities=12% Similarity=0.143 Sum_probs=67.7
Q ss_pred ceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEeec
Q 022077 174 HTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251 (303)
Q Consensus 174 ~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~~~ 251 (303)
++|||+|||.++++++|+++|+ .||.|+++++..++. ..++||||+|++.++|.+|+. +|+..|+|+.|.|..+
T Consensus 1 Ttv~V~nlp~~~t~~~l~~~F~-~~G~I~~v~~~~~~~--~~~~~afV~F~~~~~a~~Al~-~~~~~i~g~~i~V~~~ 74 (75)
T d2ghpa2 1 TTVLVKNLPKSYNQNKVYKYFK-HCGPIIHVDVADSLK--KNFRFARIEFARYDGALAAIT-KTHKVVGQNEIIVSHL 74 (75)
T ss_dssp CEEEEEEECTTCCHHHHHHHHG-GGSCEEEEEEEECTT--SSSEEEEEEESSHHHHHHHHT-TTTCEETTEECEEEEC
T ss_pred CEEEEECCCCCCCHHHHHHHHh-cCCceEEEEEEeecc--ccceEEEEEEcchHHhHHHHH-hcCcEECCEEEEEEEC
Confidence 4799999999999999999998 999999999999864 346799999999999999985 8999999999999865
No 108
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.75 E-value=7.4e-18 Score=119.99 Aligned_cols=83 Identities=14% Similarity=0.136 Sum_probs=73.5
Q ss_pred CCCCCCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHh--CCceeCCee
Q 022077 168 RDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEM--NGVFCSTRP 245 (303)
Q Consensus 168 ~~~~~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l--~g~~~~g~~ 245 (303)
....++++|||+|||.++++++|+++|+ .||.|+++++.++ +++|||+|++.++|.+|+..| ++..++|+.
T Consensus 10 ~~~~ps~~l~v~nlp~~~te~~l~~~F~-~fG~I~~~~~~~~------k~~AfV~f~~~e~A~~ai~~~~~~~~~~~g~~ 82 (104)
T d1wexa_ 10 HKVSVSPVVHVRGLCESVVEADLVEALE-KFGTICYVMMMPF------KRQALVEFENIDSAKECVTFAADVPVYIAGQQ 82 (104)
T ss_dssp CCCCCCSEEEEESCCSSCCHHHHHHHHT-TTSCEEEEEEETT------TTEEEEEESSHHHHHHHHHHHHHSCCBSSSSB
T ss_pred CcCCCCCEEEEeCCCCCCCHHHHHHhhh-hcccceEEEEEec------ceeEEEEeCCHHHHHHHHHHHcCCCcEEeeEE
Confidence 4456789999999999999999999998 9999999998654 679999999999999999987 556789999
Q ss_pred eEEeecccCCCC
Q 022077 246 MRIGPATNKKTV 257 (303)
Q Consensus 246 l~v~~~~~~~~~ 257 (303)
|+|.|++.++..
T Consensus 83 l~v~~s~~~~~~ 94 (104)
T d1wexa_ 83 AFFNYSTSKRIT 94 (104)
T ss_dssp CEEEECSSSSCC
T ss_pred EEEEEcCCCccC
Confidence 999999876544
No 109
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=2.3e-18 Score=120.85 Aligned_cols=82 Identities=18% Similarity=0.250 Sum_probs=74.1
Q ss_pred ceEEEcCCCccCCHHHHHHHHhhcCC-ceEEEEEecC-CCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEeee
Q 022077 82 RTLWIGDLQYWMDETYLNTCFAHTGE-VVAVKVIRNK-QTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNW 159 (303)
Q Consensus 82 ~~l~v~nLp~~~t~~~l~~~f~~~g~-i~~~~~~~~~-~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~~ 159 (303)
|+|||||||.++|+++|+++|+.||. |.++.++++. .+++++|||||+|.+.++|.+|++.|++..+...++.|+|.|
T Consensus 2 ~rLyV~nLp~~~te~~l~~~f~~~g~~i~~v~~~~~~~~~~~~rg~aFV~F~~~~~A~~Ai~~l~~~~~~~~g~~i~V~~ 81 (96)
T d2disa1 2 CRLFIGGIPKMKKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVDW 81 (96)
T ss_dssp EEEEEECCCTTSCHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTTTTTCCSCBTTBCCEEEE
T ss_pred CEEEEcCCCCcCCHHHHHHHHHHhCCcceEEEEeeeccccccCCCeEEEEEcCHHHHHHHHHHHcCCCeEECCEEEEEEE
Confidence 68999999999999999999999996 8899998875 468999999999999999999999998777665789999999
Q ss_pred cCCC
Q 022077 160 ASFG 163 (303)
Q Consensus 160 ~~~~ 163 (303)
+...
T Consensus 82 A~p~ 85 (96)
T d2disa1 82 AEPE 85 (96)
T ss_dssp SCSS
T ss_pred cCCC
Confidence 9754
No 110
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=6.3e-19 Score=121.65 Aligned_cols=79 Identities=20% Similarity=0.322 Sum_probs=70.4
Q ss_pred CCCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEee
Q 022077 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250 (303)
Q Consensus 171 ~~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~~ 250 (303)
..+++|||+||+.++++++|+++|+ +||.|.++++. ..+++||||+|++.++|++|+. ++..|+|+.|+|.|
T Consensus 3 ~~s~~lfV~nLp~~~te~~L~~~F~-~~G~v~~v~~~-----~~~~gfafV~f~~~~~a~~a~~--~~~~i~g~~l~v~~ 74 (88)
T d1wf0a_ 3 SGSSGVFVGRCTGDMTEDELREFFS-QYGDVMDVFIP-----KPFRAFAFVTFADDQIAQSLCG--EDLIIKGISVHISN 74 (88)
T ss_dssp SCCCEEEEESCCSSSCHHHHHHHST-TTSCCCEEECC-----SSCCSCCEEECSCHHHHHHTTT--CEEEETTEEEEEEC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHH-HcCCceEEEEe-----eccCceEEEEECCHHHHHHHHh--CCCEECCEEeEEEe
Confidence 3468999999999999999999998 99999998774 3458999999999999999985 88899999999999
Q ss_pred cccCCCC
Q 022077 251 ATNKKTV 257 (303)
Q Consensus 251 ~~~~~~~ 257 (303)
++++...
T Consensus 75 a~~k~~~ 81 (88)
T d1wf0a_ 75 AEPKHNS 81 (88)
T ss_dssp CCCCCCC
T ss_pred CCCCCCC
Confidence 9877654
No 111
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=3.4e-18 Score=121.06 Aligned_cols=80 Identities=25% Similarity=0.387 Sum_probs=72.4
Q ss_pred CCcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEee
Q 022077 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLN 158 (303)
Q Consensus 79 ~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~ 158 (303)
...++|||+|||.++|+++|+++|+.||.|..+.+..+. +++++|||||+|.+.++|.+|++.|||..+ .++.+++.
T Consensus 16 ~~~~~lfV~nLp~~~te~~L~~~F~~~G~i~~~~~~~~~-~~~~~g~afV~f~~~~~A~~Ai~~lng~~i--~gr~~~v~ 92 (101)
T d1x5oa1 16 QDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDS-SGTSRGVGFARMESTEKCEAVIGHFNGKFI--KTPPGVSA 92 (101)
T ss_dssp CCTTEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEEECS-SSCEEEEEEEEESCHHHHHHHHHHHBTCCC--CCCTTSCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHhhcccccceeeeccc-ccccccceeEEeCCHHHHHHHHHHhCCCEE--CCcCCccC
Confidence 455799999999999999999999999999999998885 789999999999999999999999999999 67777776
Q ss_pred ecC
Q 022077 159 WAS 161 (303)
Q Consensus 159 ~~~ 161 (303)
++.
T Consensus 93 ~~~ 95 (101)
T d1x5oa1 93 PTE 95 (101)
T ss_dssp CSS
T ss_pred CCC
Confidence 653
No 112
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=1.3e-18 Score=120.41 Aligned_cols=79 Identities=23% Similarity=0.480 Sum_probs=72.6
Q ss_pred cceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEeeec
Q 022077 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWA 160 (303)
Q Consensus 81 ~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~~~ 160 (303)
..+|||+|||.++|+++|+++|+.||.|.++++..++ +.++|||||+|.+.++|.+|++.|+|..+ .++.|+|.++
T Consensus 8 ~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~--~~~kg~afV~f~~~~~A~~Ai~~l~g~~~--~g~~i~V~~a 83 (89)
T d1cvja2 8 VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMNGMLL--NDRKVFVGRF 83 (89)
T ss_dssp TTEEEEESCCSSCCHHHHHHHHHTTSCEEEEEECCBT--TBCCSCEEEEESCHHHHHHHTTSSSEEEE--TTEEEEEEEC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEeec--CCCcceeEEEECCHHHHHHHHHHcCCCEE--CCEEEEEEEC
Confidence 4579999999999999999999999999999999886 34789999999999999999999999999 7899999998
Q ss_pred CCC
Q 022077 161 SFG 163 (303)
Q Consensus 161 ~~~ 163 (303)
...
T Consensus 84 ~~~ 86 (89)
T d1cvja2 84 KSR 86 (89)
T ss_dssp CCT
T ss_pred CCC
Confidence 743
No 113
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.75 E-value=8.9e-19 Score=120.33 Aligned_cols=81 Identities=23% Similarity=0.318 Sum_probs=69.8
Q ss_pred CCcceEEEcCCCccCC-HHHHHHHHhhcCCceEEEEEec-CCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeE
Q 022077 79 GEIRTLWIGDLQYWMD-ETYLNTCFAHTGEVVAVKVIRN-KQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFR 156 (303)
Q Consensus 79 ~~~~~l~v~nLp~~~t-~~~l~~~f~~~g~i~~~~~~~~-~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~ 156 (303)
.+.++|||+|||.++| +++|+++|++||.|.++++..+ +.+++++|||||+|.+.++|.+|++ |||..+ .|+.|+
T Consensus 2 ~e~~~l~V~nLp~~~t~ed~l~~~F~~~G~i~~v~i~~~~~~~~~~kg~afV~f~~~~~a~~Al~-~n~~~~--~gr~l~ 78 (86)
T d2ghpa3 2 LEGREIMIRNLSTELLDENLLRESFEGFGSIEKINIPAGQKEHSFNNCCAFMVFENKDSAERALQ-MNRSLL--GNREIS 78 (86)
T ss_dssp CTTTEEEEEEECTTTCCHHHHHHHHGGGSCEEEEECCSCCC---CCCEEEEEEESSHHHHHHHGG-GTTEEE--TTEEEE
T ss_pred CCCCEEEEECCCCCcccHHHHHHHHHhhhhccceeeecccCCccccceeeeEEECCHHHHHHHHh-cCCCEE--CCEEEE
Confidence 3578999999999876 5669999999999999998764 5688999999999999999999995 999999 789999
Q ss_pred eeecCC
Q 022077 157 LNWASF 162 (303)
Q Consensus 157 v~~~~~ 162 (303)
|.|+..
T Consensus 79 V~~a~~ 84 (86)
T d2ghpa3 79 VSLADK 84 (86)
T ss_dssp EEECCC
T ss_pred EEEcCC
Confidence 999874
No 114
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.74 E-value=3.8e-18 Score=119.92 Aligned_cols=79 Identities=14% Similarity=0.113 Sum_probs=71.9
Q ss_pred CCCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEee
Q 022077 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250 (303)
Q Consensus 171 ~~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~~ 250 (303)
....+|||+|||.++++++|+++|+ .||.|+++.|.. +|||||+|.+.++|.+|++.|||..|.|+.|+|.|
T Consensus 13 ~~~~~i~V~Nlp~~~~~~~L~~~F~-~~G~v~~~~i~~-------~g~afV~f~~~~~a~~Ai~~lng~~~~g~~i~v~~ 84 (98)
T d1wg4a_ 13 RSDFRVLVSGLPPSGSWQDLKDHMR-EAGDVCYADVQK-------DGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSY 84 (98)
T ss_dssp SCSCEEEEECCCSSCCHHHHHHHHT-TSSCEEEEEEET-------TTEEEEEESSHHHHHHHHHHHSSEEEECTTSCEEE
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHH-hhcccccccccc-------cceEEEEECCHHHHHHHHHHhCCCEeCCeEEEEEE
Confidence 4467899999999999999999998 999999998852 57999999999999999999999999999999999
Q ss_pred cccCCCC
Q 022077 251 ATNKKTV 257 (303)
Q Consensus 251 ~~~~~~~ 257 (303)
++.+..+
T Consensus 85 ~~~~~~~ 91 (98)
T d1wg4a_ 85 IRVYPER 91 (98)
T ss_dssp EEEECCC
T ss_pred EecCCCC
Confidence 9876544
No 115
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=2.4e-18 Score=122.45 Aligned_cols=84 Identities=13% Similarity=0.175 Sum_probs=74.4
Q ss_pred CCCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEee
Q 022077 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGP 250 (303)
Q Consensus 171 ~~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~~ 250 (303)
....+|||+|||+++++++|+++|+ .||.|..+.++.+..+|+++|+|||+|.+.++|.+|+. |||..|+|+.|+|.+
T Consensus 6 ~~~~~v~v~nLp~~~t~~~l~~~F~-~~g~i~~~~~~~~~~~g~~~G~afV~F~s~~~a~~Al~-~n~~~i~gr~i~V~~ 83 (103)
T d2cpya1 6 SAKVCAHITNIPFSITKMDVLQFLE-GIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSER-LHRKKLNGREAFVHV 83 (103)
T ss_dssp SCCCEEEEESCCTTSCHHHHHHHTT-TSCCCSTTEEECCCTTSSCSSCEEEECSSHHHHHHHGG-GCSEEETTEEEEEEE
T ss_pred CCceEEEEeCCCCCCCHHHHhhhhc-ccceEEEEEEEEeCCCCCcCccEEEEECCHHHHHHHHh-cCCCeECCcEEEEEE
Confidence 3456899999999999999999998 99999886666666689999999999999999999996 899999999999999
Q ss_pred cccCCC
Q 022077 251 ATNKKT 256 (303)
Q Consensus 251 ~~~~~~ 256 (303)
+..+..
T Consensus 84 ~~~~~~ 89 (103)
T d2cpya1 84 VTLEDM 89 (103)
T ss_dssp ECHHHH
T ss_pred CCHHHh
Confidence 866543
No 116
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=1e-18 Score=124.34 Aligned_cols=82 Identities=21% Similarity=0.250 Sum_probs=76.8
Q ss_pred CcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEeee
Q 022077 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNW 159 (303)
Q Consensus 80 ~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~~ 159 (303)
.+++|||+|||.++++++|+++|+.||.|..+.+..+..+|+++|||||+|.+.++|.+|++.|+|..+ .|+.|+|.|
T Consensus 17 ps~tl~V~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~~fV~f~~~~~A~~Ai~~l~g~~~--~g~~l~V~~ 94 (102)
T d2cpxa1 17 PNKVLYLKNLSPRVTERDLVSLFARFQEKKGPPIQFRMMTGRMRGQAFITFPNKEIAWQALHLVNGYKL--YGKILVIEF 94 (102)
T ss_dssp CCSEEEEECCCTTCCHHHHHHHTHHHHHSSSSCCEEEEECSSSCSEEEEECSSHHHHHHHHHHSTTCBC--SSCBCEEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHhhccceeeEEeecccccccccccceEEeccHHHHHHHHHHhCCCEE--CCEEEEEEe
Confidence 468999999999999999999999999999999998888899999999999999999999999999999 789999999
Q ss_pred cCCC
Q 022077 160 ASFG 163 (303)
Q Consensus 160 ~~~~ 163 (303)
+...
T Consensus 95 ak~k 98 (102)
T d2cpxa1 95 GKNK 98 (102)
T ss_dssp CCCC
T ss_pred CCCc
Confidence 9754
No 117
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=6.7e-18 Score=118.22 Aligned_cols=76 Identities=18% Similarity=0.472 Sum_probs=70.2
Q ss_pred CcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEeee
Q 022077 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNW 159 (303)
Q Consensus 80 ~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~~ 159 (303)
..++|||+||+.++++++|+++|++||.|.++++.++ +|||||+|.+.++|.+|+..|+|..+ .++.|+|.|
T Consensus 17 ~~~~l~v~nL~~~~te~~L~~~F~~fG~i~~v~i~~~------kg~afV~f~~~~~A~~Ai~~l~~~~i--~g~~l~v~~ 88 (96)
T d1x4ga1 17 KNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGTTI--EGHVVKCYW 88 (96)
T ss_dssp SCCEEEEECCSSCCCHHHHHHHHHHHSCEEEEEEETT------TTEEEEEESSHHHHHHHHHHHTTCEE--TTEECEEEC
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHhCCceEEEEEec------ceEEEEEECCHHHHHHHHHHhCCCEE--CCEEEEEEE
Confidence 3578999999999999999999999999999999876 46999999999999999999999999 789999999
Q ss_pred cCCC
Q 022077 160 ASFG 163 (303)
Q Consensus 160 ~~~~ 163 (303)
+...
T Consensus 89 ak~~ 92 (96)
T d1x4ga1 89 GKES 92 (96)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 8643
No 118
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.74 E-value=4.2e-18 Score=113.54 Aligned_cols=72 Identities=19% Similarity=0.274 Sum_probs=64.4
Q ss_pred EEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEeecccCC
Q 022077 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATNKK 255 (303)
Q Consensus 176 l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~~~~~~~ 255 (303)
|||+|||.++++++|+++|+ +|| +..+++ ++++|||||+|++.++|.+|+..|||..+.|+.|+|+|++.+.
T Consensus 1 i~V~nLp~~~t~~~l~~~F~-~~g-~~~~~~------~~~~g~afv~f~~~~~A~~Ai~~ln~~~~~g~~l~V~~a~~d~ 72 (75)
T d1wi6a1 1 ILIRGLPGDVTNQEVHDLLS-DYE-LKYCFV------DKYKGTAFVTLLNGEQAEAAINTFHQSRLRERELSVQLQPTDA 72 (75)
T ss_dssp EEEECCCTTCCHHHHHHHTT-TSC-EEEEEE------ETTTTEEEEEESSHHHHHHHHHHHTTEESSSCEEEEEECCSTT
T ss_pred CEEeCCCCcCCHHHHHHHHh-ccc-ccceee------cccceeEEEEECCHHHHHHHHHHhCCccCCCCEEEEEEeCCCC
Confidence 79999999999999999998 999 444443 3568999999999999999999999999999999999997653
No 119
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.73 E-value=4.9e-19 Score=122.82 Aligned_cols=82 Identities=18% Similarity=0.257 Sum_probs=73.7
Q ss_pred CCCCcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeE
Q 022077 77 QPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFR 156 (303)
Q Consensus 77 ~~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~ 156 (303)
.+...++|||+|||.++|+++|+++|+.||.|.++.++.+ .+|+++|||||+|.+.++|.+|++ |+|..+ .|+.|+
T Consensus 9 ~~~~~~~ifV~nL~~~~te~~l~~~F~~~G~i~~~~v~~~-~~g~~kg~afv~F~~~e~a~~Al~-~~g~~~--~g~~i~ 84 (91)
T d1fjeb1 9 ESTTPFNLFIGNLNPNKSVAELKVAISELFAKNDLAVVDV-RTGTNRKFGYVDFESAEDLEKALE-LTGLKV--FGNEIK 84 (91)
T ss_dssp SCSSSEEEEEECCCTTSCHHHHHHHHHHHHHHHTCCCCEE-EEETTTTEEEEEESSHHHHHHHHH-GGGEEE--TTEEEE
T ss_pred CCCCCcEEEEeCccCcchHHHHHHHHhcCCcEEEeeeeec-CCCCccEEeEEeeCCHHHHHHHHh-cCCcEE--CCEEEE
Confidence 3456679999999999999999999999999988888655 479999999999999999999995 899999 889999
Q ss_pred eeecCC
Q 022077 157 LNWASF 162 (303)
Q Consensus 157 v~~~~~ 162 (303)
|.++..
T Consensus 85 V~~ak~ 90 (91)
T d1fjeb1 85 LEKPKG 90 (91)
T ss_dssp EECCCC
T ss_pred EEecCC
Confidence 999863
No 120
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=6e-18 Score=115.72 Aligned_cols=78 Identities=15% Similarity=0.258 Sum_probs=71.6
Q ss_pred CcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEeee
Q 022077 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNW 159 (303)
Q Consensus 80 ~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~~ 159 (303)
..++|||+|||.++|+++|+++|+.||.|.++.+.++. +|+++|||||+|.+.++|.+|++ ++|..+ .++.+++.|
T Consensus 5 ~~rtvfV~nlp~~~te~~l~~~F~~~G~v~~v~l~~~~-~~~~kG~afV~f~~~e~a~~al~-~~~~~~--~g~~l~v~~ 80 (85)
T d1zh5a2 5 KNRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTL-HKAFKGSIFVVFDSIESAKKFVE-TPGQKY--KETDLLILF 80 (85)
T ss_dssp HTTEEEEECCCTTCCHHHHHHHHTTSCCEEEEEEEECT-TCCEEEEEEEEESCHHHHHHHHT-CCCCEE--TTEECEEEE
T ss_pred CcCEEEEECCCCCCCHHHHHHHHHHhcccccceeeeec-cCCcceEEEEEEcCHHHHHHHHH-HCCCEE--CCEEEEEEE
Confidence 45799999999999999999999999999999998876 79999999999999999999995 699888 788999988
Q ss_pred cC
Q 022077 160 AS 161 (303)
Q Consensus 160 ~~ 161 (303)
..
T Consensus 81 ~~ 82 (85)
T d1zh5a2 81 KD 82 (85)
T ss_dssp GG
T ss_pred cC
Confidence 64
No 121
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=1.3e-18 Score=115.47 Aligned_cols=70 Identities=27% Similarity=0.421 Sum_probs=66.2
Q ss_pred EEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCcee
Q 022077 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNF 155 (303)
Q Consensus 84 l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i 155 (303)
|||+|||.++|+++|+++|+.||.|..+++.+++.++.++|||||+|.+.++|.+|++.|||..+ .|+.+
T Consensus 1 lyV~nLp~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~~--~Gr~~ 70 (72)
T d1x4ea1 1 LYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKASGV--QAQMA 70 (72)
T ss_dssp EEEESCCTTCCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHHHHHHTC--CEESC
T ss_pred CEEeCCCCcCCHHHHHHHHhhhccccccccccccccccccceeEEEECCHHHHHHHHHHhCCCEE--CCEEC
Confidence 79999999999999999999999999999999999999999999999999999999999999999 55544
No 122
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=1.1e-17 Score=120.03 Aligned_cols=83 Identities=12% Similarity=0.251 Sum_probs=75.4
Q ss_pred CCcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEee
Q 022077 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLN 158 (303)
Q Consensus 79 ~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~ 158 (303)
....+|||+||++.+|+++|+++|++||.|.++.+.+++ .+|||||+|.+.++|.+|++.|+|..+.++++.+++.
T Consensus 5 s~~~~v~V~NL~~~vte~~L~~~F~~~G~i~~~~i~~~~----~~g~aFV~f~~~e~A~~Ai~~ln~~~l~~~~~~l~v~ 80 (108)
T d2adba1 5 SPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKN----NQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRID 80 (108)
T ss_dssp CCEEEEESCSCCSTTHHHHHHHHHTTTSCEEEEEEEEET----TEEEEEEEESCHHHHHHHHHHHHSCCSSTTCCCCEEE
T ss_pred CCeEEEEEeCcCCCCCHHHHHHHHccCCcEEEEEEEeeC----CCCeEEEEECCHHHHHHHHHHHCCCEeccCCcEEEEE
Confidence 456789999999999999999999999999999998875 4689999999999999999999999998889999999
Q ss_pred ecCCCCC
Q 022077 159 WASFGAG 165 (303)
Q Consensus 159 ~~~~~~~ 165 (303)
|+.....
T Consensus 81 ~s~~~~~ 87 (108)
T d2adba1 81 FSKLTSL 87 (108)
T ss_dssp ECSSCSC
T ss_pred ecCCccc
Confidence 9876543
No 123
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.73 E-value=4.8e-18 Score=119.67 Aligned_cols=81 Identities=11% Similarity=0.188 Sum_probs=71.7
Q ss_pred CCCCCceEEEcCCCcc-cCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHH--HhCCceeCCee
Q 022077 169 DDTPDHTIFVGDLAAD-VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMT--EMNGVFCSTRP 245 (303)
Q Consensus 169 ~~~~~~~l~v~nl~~~-~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~--~l~g~~~~g~~ 245 (303)
....+++|||+|||.+ +++++|.++|+ .||.|.++.++.+ +|+|||+|++.++|.+|++ .+++..++|+.
T Consensus 14 ~~~~~~~l~v~nLp~~~~te~~l~~~F~-~fG~V~~v~~~~~------k~~afV~f~~~~~A~~Ai~~~~~~~~~~~gr~ 86 (99)
T d1x4fa1 14 KQELGRVIHLSNLPHSGYSDSAVLKLAE-PYGKIKNYILMRM------KSQAFIEMETREDAMAMVDHCLKKALWFQGRC 86 (99)
T ss_dssp SSCCCCEEEEESCCCSSCCSHHHHTTTT-TTSCCSEEEEETT------TTEEEEECSSHHHHHHHHHHHHHSCCCSSSSC
T ss_pred CCCCCCEEEEeCCcCCccCHHHHHhhhc-cccceeEEEEeec------CCcEEEEecchHHHHHHHHHHhcCCceECCEE
Confidence 3456789999999985 89999999998 9999999999755 6899999999999999997 56888999999
Q ss_pred eEEeecccCCC
Q 022077 246 MRIGPATNKKT 256 (303)
Q Consensus 246 l~v~~~~~~~~ 256 (303)
|+|.|++.+++
T Consensus 87 l~V~~s~~~~~ 97 (99)
T d1x4fa1 87 VKVDLSEKYKK 97 (99)
T ss_dssp CEEEEECSCSS
T ss_pred EEEEEcCCccc
Confidence 99999987653
No 124
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.73 E-value=1.2e-17 Score=113.76 Aligned_cols=76 Identities=16% Similarity=0.331 Sum_probs=68.6
Q ss_pred CcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEeee
Q 022077 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNW 159 (303)
Q Consensus 80 ~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~~ 159 (303)
.+++|||+|||.++|+++|+++|+.||.|.++++.+++ +|||||+|.+.++|.+|++.|+|..+. .++.|+|.|
T Consensus 7 P~~tl~V~nLp~~~t~~~l~~~f~~~G~i~~v~~~~~~-----~g~afV~f~~~~~A~~A~~~l~g~~~~-~~~~i~v~~ 80 (83)
T d2b0ga1 7 PNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPNR-----HDIAFVEFTTELQSNAAKEALQGFKIT-PTHAMKITF 80 (83)
T ss_dssp CCSEEEEESCCTTCCHHHHHHHHTTSTTEEEEEECTTT-----CSCEEEEESSHHHHHHHHHHHTTCBSS-TTCBCEEEE
T ss_pred CCCEEEEECCCCCCCHHHHHhhhccCccEEEeeeeccc-----ceeEEEecCCHHHHHHHHHHhCCcEeC-CCcEEEEEE
Confidence 45899999999999999999999999999999997653 479999999999999999999999884 357899999
Q ss_pred cC
Q 022077 160 AS 161 (303)
Q Consensus 160 ~~ 161 (303)
+.
T Consensus 81 ak 82 (83)
T d2b0ga1 81 AK 82 (83)
T ss_dssp CC
T ss_pred ec
Confidence 86
No 125
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=1.3e-17 Score=116.72 Aligned_cols=80 Identities=15% Similarity=0.267 Sum_probs=71.5
Q ss_pred CCcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEee
Q 022077 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLN 158 (303)
Q Consensus 79 ~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~ 158 (303)
...++|||+|||.++|+++|+++|+.||.|..+.+..+ +..++||||+|.+.++|.+|++.|+|..+ .++.|+|.
T Consensus 12 ~~~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~~~~~---~~~~g~afV~f~~~e~a~~Ai~~l~g~~~--~g~~l~V~ 86 (95)
T d1x4aa1 12 NNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNR---RGGPPFAFVEFEDPRDAEDAVYGRDGYDY--DGYRLRVE 86 (95)
T ss_dssp CCSSEEEEESCCTTCCHHHHHHHHGGGSCEEEEEECCS---SSSSCCEEEEESCHHHHHHHHHHHTTCEE--TTEECEEE
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHhcCCceEEEEeccc---ccccceEEEEECCHHHHHHHHHHhCCCEE--CCEEEEEE
Confidence 45578999999999999999999999999988887553 45689999999999999999999999999 78999999
Q ss_pred ecCCC
Q 022077 159 WASFG 163 (303)
Q Consensus 159 ~~~~~ 163 (303)
|+...
T Consensus 87 ~a~~~ 91 (95)
T d1x4aa1 87 FPRSG 91 (95)
T ss_dssp CCCCC
T ss_pred eccCC
Confidence 98643
No 126
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=1.6e-17 Score=130.93 Aligned_cols=111 Identities=20% Similarity=0.267 Sum_probs=92.9
Q ss_pred CceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEeecc
Q 022077 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPAT 252 (303)
Q Consensus 173 ~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~~~~ 252 (303)
.++|||+|||.++++++|+++|+ +||.|.++.++++..++.++|||||+|.+.++|.+|+.. ++..+.++.+.+.+..
T Consensus 6 ~r~lfV~nLp~~~te~~L~~~F~-~~G~v~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~-~~~~~~~~~~~~~~~~ 83 (183)
T d1u1qa_ 6 LRKLFIGGLSFETTDESLRSHFE-QWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA-RPHKVDGRVVEPKRAV 83 (183)
T ss_dssp HHEEEEESCCTTCCHHHHHHHHG-GGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHT-CSCEETTEECEEEECC
T ss_pred CCEEEEECCCCCCCHHHHHHHHH-HcCCEEEEEeeecccCCCccCceecccCCHHHHHHHHHh-cCCcccccchhhhhhh
Confidence 36899999999999999999998 999999999999999999999999999999999999875 6778888888888766
Q ss_pred cCCCCCCccccCCCCccCccccccCCCCCCcEEEEeeec-ccC-ccccccc
Q 022077 253 NKKTVSGQQQYPKASYQNSQVAQSDDDPNNTTVSTVVIF-NIK-NPVFQTF 301 (303)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~f 301 (303)
.+...... .....+++|||+++. ++| ++|.++|
T Consensus 84 ~~~~~~~~----------------~~~~~~~~i~V~~lp~~~te~~L~~~f 118 (183)
T d1u1qa_ 84 SREDSQRP----------------GAHLTVKKIFVGGIKEDTEEHHLRDYF 118 (183)
T ss_dssp CTTGGGST----------------TTTCCCSEEEEECCCTTCCHHHHHHHH
T ss_pred hccccccc----------------ccccccceeEEccCCCcCCHHHHhhhh
Confidence 55433221 233455799999766 788 8888776
No 127
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=2.8e-17 Score=117.05 Aligned_cols=81 Identities=22% Similarity=0.428 Sum_probs=71.1
Q ss_pred CcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecC-CCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEee
Q 022077 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNK-QTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLN 158 (303)
Q Consensus 80 ~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~-~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~ 158 (303)
..++|||+|||+++|+++|+++|+.|| +.++.++.+. .+++++|||||+|.+.++|++|+ .|++..| .++.|+|.
T Consensus 14 p~~~v~V~nLp~~~te~~l~~~f~~~g-~~~~~~~~~~~~~g~~~g~afV~f~~~e~a~~~~-~~~~~~~--~gr~l~V~ 89 (104)
T d1wi8a_ 14 PPYTAFLGNLPYDVTEESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSAL-SLNEESL--GNKRIRVD 89 (104)
T ss_dssp SCEEEEEESCCSSCCHHHHHHHTTTSC-EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHH-GGGTCEE--TTEECEEE
T ss_pred CCCEEEEeCCCCcCCHHHHHHHHHHhc-cccceeeeeeccCCCcceeeeEEECCHHHHHHHH-HcCCCEE--CCEEEEEE
Confidence 358999999999999999999999999 7777777765 56889999999999999998777 5999999 78999999
Q ss_pred ecCCCC
Q 022077 159 WASFGA 164 (303)
Q Consensus 159 ~~~~~~ 164 (303)
|+....
T Consensus 90 ~a~~~~ 95 (104)
T d1wi8a_ 90 VADQAQ 95 (104)
T ss_dssp ECCCCC
T ss_pred ECCCCC
Confidence 987553
No 128
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.72 E-value=5.2e-17 Score=114.00 Aligned_cols=78 Identities=19% Similarity=0.433 Sum_probs=71.7
Q ss_pred CcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEeee
Q 022077 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNW 159 (303)
Q Consensus 80 ~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~~ 159 (303)
.+++|||+||+.++++++|+++|++||.|..+++.+++ +||||+|.+.++|.+|++.|++..+.+.++.|+|.|
T Consensus 16 Ps~tl~V~nLp~~~t~~~l~~~f~~~G~i~~~~~~~~~------~~afV~f~~~~~A~~A~~~l~~~~i~g~~~~l~v~~ 89 (97)
T d1whya_ 16 PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGD------SFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDF 89 (97)
T ss_dssp CCSCEEEECCCSSCCHHHHHHHHHTTSCEEEEEECSSS------CCEEEEESSHHHHHHHHHHHTTCBCSSSSCBCEEEE
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHhhcccceEeeeccc------cEEEeccCCHHHHHHHHHHhCCCEeCCCceEEEEEe
Confidence 46899999999999999999999999999999987653 599999999999999999999999988888999999
Q ss_pred cCCC
Q 022077 160 ASFG 163 (303)
Q Consensus 160 ~~~~ 163 (303)
+...
T Consensus 90 ak~~ 93 (97)
T d1whya_ 90 AKSG 93 (97)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 8754
No 129
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.71 E-value=3.7e-18 Score=117.89 Aligned_cols=77 Identities=12% Similarity=0.248 Sum_probs=69.1
Q ss_pred CcceEEEcCCCccCCHHHH---HHHHhhcCCceEEEEEecCCCCCc---ccEEEEEEccHHHHHHHHHHhCCCCCCCCCc
Q 022077 80 EIRTLWIGDLQYWMDETYL---NTCFAHTGEVVAVKVIRNKQTGQI---EGYGFIEFISRAGAERVLQTFNGTPMPNGEQ 153 (303)
Q Consensus 80 ~~~~l~v~nLp~~~t~~~l---~~~f~~~g~i~~~~~~~~~~~~~~---~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~ 153 (303)
..++|||+|||+++++++| +++|++||.|.++.+.+++.++.+ +|||||+|.+.++|.+|++.|||..+ .|+
T Consensus 7 q~n~vyV~nLp~~~t~~~l~~~~e~F~~~G~I~~v~i~~~~~~~~~~~~~g~aFV~f~~~~~A~~Ai~~lng~~~--~gr 84 (89)
T d2cpia1 7 QKNLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVV--DGR 84 (89)
T ss_dssp CSSCEEEEEECTTTCCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEE--TTE
T ss_pred ecCEEEEECCCCccCHHHHHHHHHHhcccCCceEEEEeeccCcCCCCCcceEEEEecccchhHHHHHHHhCCCEE--CCE
Confidence 4568999999999999999 678999999999999998866654 48999999999999999999999999 788
Q ss_pred eeEee
Q 022077 154 NFRLN 158 (303)
Q Consensus 154 ~i~v~ 158 (303)
.|+++
T Consensus 85 ~lkvS 89 (89)
T d2cpia1 85 TLKAS 89 (89)
T ss_dssp EEEEE
T ss_pred EEEEC
Confidence 88874
No 130
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.71 E-value=1.2e-17 Score=115.18 Aligned_cols=80 Identities=10% Similarity=0.167 Sum_probs=71.1
Q ss_pred CCCCCceEEEcCCCcc-cCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHh--CCceeCCee
Q 022077 169 DDTPDHTIFVGDLAAD-VTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEM--NGVFCSTRP 245 (303)
Q Consensus 169 ~~~~~~~l~v~nl~~~-~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l--~g~~~~g~~ 245 (303)
....+++|||+||+.. ++++||.++|+ .||.|.++.++.+ +++|||+|++.++|.+|++.| ++..++|+.
T Consensus 4 ~~~~sr~v~v~nl~~~~~t~~eL~~lF~-~fG~I~~i~i~~~------k~~afV~f~~~~~A~~A~~~l~~~~~~~~gr~ 76 (89)
T d1x4da1 4 RVETRRVVHIMDFQRGKNLRYQLLQLVE-PFGVISNHLILNK------INEAFIEMATTEDAQAAVDYYTTTPALVFGKP 76 (89)
T ss_dssp CCCCCCEEEEESCCCSSSHHHHHHTTTG-GGSCEEEEEECSS------SSCEEEEESSHHHHHHHHHHHHHSCCEETTEE
T ss_pred CCCCCcEEEEECCCCCcCCHHHHHHHHH-hhCCeEEEEeecc------ceEEEEEEcchhhHHHHHHHHhhCCCccCCce
Confidence 4567889999999986 78999999998 9999999999765 568999999999999999966 678899999
Q ss_pred eEEeecccCC
Q 022077 246 MRIGPATNKK 255 (303)
Q Consensus 246 l~v~~~~~~~ 255 (303)
|+|.|++...
T Consensus 77 l~V~~s~~~~ 86 (89)
T d1x4da1 77 VRVHLSQKYK 86 (89)
T ss_dssp CEEEEECCCT
T ss_pred EEEEECCCcc
Confidence 9999998644
No 131
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.71 E-value=1.9e-17 Score=113.43 Aligned_cols=77 Identities=25% Similarity=0.443 Sum_probs=70.5
Q ss_pred CcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEeee
Q 022077 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNW 159 (303)
Q Consensus 80 ~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~~ 159 (303)
..++|||+|||.++++++|+++|++||.|.++++.+++ |||||+|.+.++|.+|++.|+|..+ .++.|+|.|
T Consensus 7 ~~~~l~V~nLp~~~~~~~l~~~F~~~G~i~~i~~~~~k------~~afV~f~~~~~A~~A~~~l~g~~i--~g~~l~V~~ 78 (86)
T d2cpja1 7 QRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDK------GFGFIRLETRTLAEIAKVELDNMPL--RGKQLRVRF 78 (86)
T ss_dssp CTTEEEEESCCTTCCHHHHHHHTSTTCCCSEEEEETTT------TEEEEECSSSHHHHHHHHHHTTCCB--TTBCCEEEE
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHhCCceEeeeeccc------ceEEEEECCHHHHHHHHHHhCCCEE--CCEEEEEEE
Confidence 34689999999999999999999999999999998654 6999999999999999999999999 789999999
Q ss_pred cCCCC
Q 022077 160 ASFGA 164 (303)
Q Consensus 160 ~~~~~ 164 (303)
+....
T Consensus 79 A~~~~ 83 (86)
T d2cpja1 79 ACHSA 83 (86)
T ss_dssp SSCCS
T ss_pred CCCcC
Confidence 98653
No 132
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=7.9e-18 Score=121.44 Aligned_cols=84 Identities=17% Similarity=0.346 Sum_probs=75.7
Q ss_pred CCCCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEe
Q 022077 170 DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249 (303)
Q Consensus 170 ~~~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~ 249 (303)
.....+|||+|||+++++++|+++|+ .||.+..+.++.+..+|.++|+|||+|.+.++|.+|+. |||..|+||.|.|.
T Consensus 15 ~~~~~~i~v~nLp~~~t~~di~~~F~-~~g~~~~~~~~~~~~~g~~~G~afVeF~~~e~a~~al~-~~~~~i~gR~i~V~ 92 (112)
T d1wela1 15 HEAGFCVYLKGLPFEAENKHVIDFFK-KLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC-RHKQYMGNRFIQVH 92 (112)
T ss_dssp CCCCCEEEEECCCTTCCHHHHHHHSC-SSCBCTTTCEEEECTTSSEEEEEEEEBSSSHHHHHHHT-SCSBCSTTSCBEEE
T ss_pred CCCCeEEEEecCCCcCcHHHHhhHHh-hccccccceeeecCcccceeeEEEEEECCHHHHHHHHH-cCCCcCCCEEEEEE
Confidence 44567999999999999999999998 99999887777777799999999999999999999986 89999999999999
Q ss_pred ecccCC
Q 022077 250 PATNKK 255 (303)
Q Consensus 250 ~~~~~~ 255 (303)
.+..+.
T Consensus 93 ~~~~~~ 98 (112)
T d1wela1 93 PITKKG 98 (112)
T ss_dssp EECHHH
T ss_pred EcChHH
Confidence 887654
No 133
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=7.8e-17 Score=114.62 Aligned_cols=83 Identities=16% Similarity=0.167 Sum_probs=74.0
Q ss_pred CCcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEee
Q 022077 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLN 158 (303)
Q Consensus 79 ~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~ 158 (303)
....+|||+|||+++|+++|+++|..+|.+....++.+..+++++|||||+|.+.++|++|++ +++..| +++.|+|.
T Consensus 13 ~~~~~v~v~nLP~~~te~dI~~~F~~~g~v~~~v~~~~~~~~~~kG~afV~F~~~e~a~~a~~-~~~~~i--~gR~i~V~ 89 (104)
T d1wg5a_ 13 ANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALK-KHKERI--GHRYIEIF 89 (104)
T ss_dssp SCCCEEEEESCCTTCCHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHT-TTTCCS--SSSCCEEE
T ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEEeCCCCCcceEEEEEeCCHHHHHHHHh-hCCCEE--cceEEEEE
Confidence 355679999999999999999999999998887777777789999999999999999999995 899998 88899999
Q ss_pred ecCCCC
Q 022077 159 WASFGA 164 (303)
Q Consensus 159 ~~~~~~ 164 (303)
++....
T Consensus 90 ~~~~~~ 95 (104)
T d1wg5a_ 90 KSSRAE 95 (104)
T ss_dssp EECTTT
T ss_pred ECCHHH
Confidence 887553
No 134
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.71 E-value=1.2e-17 Score=114.71 Aligned_cols=79 Identities=14% Similarity=0.241 Sum_probs=69.5
Q ss_pred CcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEeee
Q 022077 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNW 159 (303)
Q Consensus 80 ~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~~ 159 (303)
...+|||+|||.++++++|+++|+.||.+....++.+..+|+++|+|||+|.+.++|.+|++.|||..+ .++.|+|.+
T Consensus 8 ~~~~l~v~nLp~~~~~~di~~~F~~~~~~~~~~~~~~~~~g~~~G~afV~f~~~e~a~~Ai~~l~~~~l--~gr~i~v~l 85 (86)
T d2cqpa1 8 GPTIIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDRPI--GSRKVKLVL 85 (86)
T ss_dssp SSEEEEEESCCTTCCHHHHHHHTTTSCCCTTTCEEEECSSSCEEEEEEEEESCHHHHHHHHHHTTTCEE--TTEECEEEE
T ss_pred CCCEEEEECCCCCCCHHHHHHHHhhcccceeEEEEEeCCCCCcceEEEEEEcCcHHHHHHHHHcCCCEE--CCEEEEEEE
Confidence 346799999999999999999999999987644444455899999999999999999999999999999 788888876
Q ss_pred c
Q 022077 160 A 160 (303)
Q Consensus 160 ~ 160 (303)
+
T Consensus 86 ~ 86 (86)
T d2cqpa1 86 G 86 (86)
T ss_dssp S
T ss_pred C
Confidence 4
No 135
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=4.3e-17 Score=114.40 Aligned_cols=75 Identities=19% Similarity=0.403 Sum_probs=67.0
Q ss_pred CCcceEEEcCCC-ccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEe
Q 022077 79 GEIRTLWIGDLQ-YWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRL 157 (303)
Q Consensus 79 ~~~~~l~v~nLp-~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v 157 (303)
...++|||+||+ ..+++++|+++|++||.|.++.+. +|||||+|++.++|.+|++.|||..+ .++.|+|
T Consensus 13 ~~~~~lfV~nL~~~~~~~~~L~~~F~~~G~i~~~~i~--------rg~aFV~f~~~~~A~~Ai~~lng~~~--~g~~l~V 82 (98)
T d1wf2a_ 13 SMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVH--------KGFAFVQYVNERNARAAVAGEDGRMI--AGQVLDI 82 (98)
T ss_dssp SCCCCEEEEEECTTTCCHHHHHHSSTTSSCEEEEEEE--------TEEEEEEESSHHHHHHHHHTTTTCEE--TTEECEE
T ss_pred CCCcEEEEeCCCcccCCHHHHHHHHhhcCCEEEEEEe--------CCeEEEEECCHHHHHHHHHHcCCCEE--CCEEEEE
Confidence 345679999996 678899999999999999999883 47999999999999999999999999 7899999
Q ss_pred eecCCC
Q 022077 158 NWASFG 163 (303)
Q Consensus 158 ~~~~~~ 163 (303)
.|+...
T Consensus 83 ~~a~~~ 88 (98)
T d1wf2a_ 83 NLAAEP 88 (98)
T ss_dssp EETTSC
T ss_pred EECCCC
Confidence 998754
No 136
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.70 E-value=1.5e-17 Score=116.64 Aligned_cols=81 Identities=27% Similarity=0.396 Sum_probs=71.6
Q ss_pred CCCCcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeE
Q 022077 77 QPGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFR 156 (303)
Q Consensus 77 ~~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~ 156 (303)
.....++|||+|||.++|+++|+++|++||.|..+. .+++++|||||+|.+.++|.+|++.|+|..+ .|+.|+
T Consensus 12 ~~~~~~~l~V~nL~~~~te~~l~~~F~~~g~v~~~~-----~~~~~~~~afV~f~~~~~A~~A~~~l~~~~~--~gr~i~ 84 (96)
T d1fjca_ 12 KVRAARTLLAKNLSFNITEDELKEVFEDALEIRLVS-----QDGKSKGIAYIEFKSEADAEKNLEEKQGAEI--DGRSVS 84 (96)
T ss_dssp TTTGGGEEEEESCCSSCCHHHHHHHHCSEEEECCEE-----ETTEEEEEEEEEESSHHHHHHHHHHTTEEEE--TTEEEE
T ss_pred cCCCCCEEEEeCCCCCCCHHHHHHHHHhcccceeee-----ecCccccEEEEEeCCHHHHHHHHHHcCCCEE--CCEEEE
Confidence 345678999999999999999999999999876543 2678899999999999999999999999999 889999
Q ss_pred eeecCCCC
Q 022077 157 LNWASFGA 164 (303)
Q Consensus 157 v~~~~~~~ 164 (303)
|.|+....
T Consensus 85 V~~a~~k~ 92 (96)
T d1fjca_ 85 LYYTGEKG 92 (96)
T ss_dssp EEECSSSC
T ss_pred EEEeCCCC
Confidence 99998553
No 137
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=5.5e-17 Score=111.83 Aligned_cols=77 Identities=17% Similarity=0.198 Sum_probs=68.3
Q ss_pred cceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEeeec
Q 022077 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWA 160 (303)
Q Consensus 81 ~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~~~ 160 (303)
+++|||+|||.++|+++|+++|+.||.|..+.+... +.+|||||+|++.++|.+|+..|+|..+. .++.|+|+|+
T Consensus 10 s~tL~V~NLp~~~te~~l~~~F~~~G~v~~~~~~~~----~~~~~afV~f~~~~~A~~A~~~l~~~~i~-~g~~l~v~~s 84 (88)
T d2adca2 10 SATLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFFQ----KDRKMALIQMGSVEEAVQALIDLHNHDLG-ENHHLRVSFS 84 (88)
T ss_dssp CSEEEEECCCTTCCHHHHHHHHHTTSCCEEEEEECS----SSTTCEEEEESSHHHHHHHHHHHTTCBSS-SSCBCEEEEC
T ss_pred CCEEEEECCCCCCCHHHHHHHhhccCCEEEEEEeee----cccceeEEEECCHHHHHHHHHhccCCEec-CCCEEEEEeC
Confidence 579999999999999999999999999988776543 35689999999999999999999999884 4689999998
Q ss_pred CC
Q 022077 161 SF 162 (303)
Q Consensus 161 ~~ 162 (303)
+.
T Consensus 85 k~ 86 (88)
T d2adca2 85 KS 86 (88)
T ss_dssp SS
T ss_pred CC
Confidence 64
No 138
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.70 E-value=2.8e-17 Score=118.62 Aligned_cols=77 Identities=14% Similarity=0.193 Sum_probs=69.3
Q ss_pred CCcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEee
Q 022077 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLN 158 (303)
Q Consensus 79 ~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~ 158 (303)
...++|||+|||.++++++|+++|+.||.|..|.+.+ .+|||||+|.+.++|.+|++.|||..| .++.|+|.
T Consensus 8 r~~~~l~V~nLp~~~t~~~L~~~F~~fG~I~~v~l~~------~kg~afV~f~~~~~A~~A~~~lng~~~--~gr~l~v~ 79 (111)
T d1whxa_ 8 RSKTVILAKNLPAGTLAAEIQETFSRFGSLGRVLLPE------GGITAIVEFLEPLEARKAFRHLAYSKF--HHVPLYLE 79 (111)
T ss_dssp EEEEEEEEESCCTTCCHHHHHHHHHTTSCEEEEECCS------SSSCEEEEESCHHHHHHHHHHHTTCBS--SSSBCEEE
T ss_pred CCCCEEEEECCCCCCCHHHHHhhhhccCCccEEEeec------cCceEEEEEcCHHHHHHHHHHHcCCcc--CCCeEEEE
Confidence 4567999999999999999999999999999987743 457999999999999999999999999 78899999
Q ss_pred ecCCC
Q 022077 159 WASFG 163 (303)
Q Consensus 159 ~~~~~ 163 (303)
|+...
T Consensus 80 ~a~~~ 84 (111)
T d1whxa_ 80 WAPIG 84 (111)
T ss_dssp EEETT
T ss_pred ECCCC
Confidence 98654
No 139
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=4.7e-17 Score=117.02 Aligned_cols=76 Identities=18% Similarity=0.291 Sum_probs=69.0
Q ss_pred cceEEEcCCC-ccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEeee
Q 022077 81 IRTLWIGDLQ-YWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNW 159 (303)
Q Consensus 81 ~~~l~v~nLp-~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~~ 159 (303)
+++|||+||+ ..+|+++|+++|+.||.|.++.+++++ +|||||+|++.++|.+|++.|+|..+ .|+.|+|.|
T Consensus 2 ~~~l~V~nL~p~~~te~~L~~~F~~fG~I~~v~i~~~~-----kg~afV~f~~~~~A~~ai~~lng~~l--~g~~l~v~~ 74 (109)
T d2adca1 2 NSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNK-----KENALVQMADGNQAQLAMSHLNGHKL--HGKPIRITL 74 (109)
T ss_dssp CSEEEEESCCTTTCCHHHHHHHHHHHTCEEEEEECCTT-----SCCEEEEESCHHHHHHHHHHHTTCBC--SSSBCEEEC
T ss_pred CCEEEEeCCCcccCCHHHHHHHHhhccccceEEEEecc-----cceEEEEECCHHHHHHHHHHhCCCEE--CCEEEEEEE
Confidence 5799999996 469999999999999999999998875 47999999999999999999999999 778999999
Q ss_pred cCCC
Q 022077 160 ASFG 163 (303)
Q Consensus 160 ~~~~ 163 (303)
+...
T Consensus 75 s~~~ 78 (109)
T d2adca1 75 SKHQ 78 (109)
T ss_dssp CSCC
T ss_pred CCCC
Confidence 8644
No 140
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=6.9e-17 Score=114.45 Aligned_cols=82 Identities=16% Similarity=0.201 Sum_probs=72.2
Q ss_pred CCCcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEe
Q 022077 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRL 157 (303)
Q Consensus 78 ~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v 157 (303)
.....+|||+|||+++|+++|+++|..||. ..+.++.+. +++.+|||||+|.+.++|++|++ +|+..| .++.|+|
T Consensus 12 ~~~~~~v~v~nLp~~~te~dl~~~F~~~~~-~~v~~~~~~-~g~~~G~afVeF~~~~~a~~Al~-~~~~~i--~gR~I~V 86 (102)
T d1weza_ 12 STTGHCVHMRGLPYRATENDIYNFFSPLNP-MRVHIEIGP-DGRVTGEADVEFATHEDAVAAMA-KDKANM--QHRYVEL 86 (102)
T ss_dssp CSSSCEEEEESCCTTCCHHHHHHSSCSCCC-SEEEEEESS-SSCEEEEEEEECSSSHHHHHHHT-TSSCCS--SSSCCEE
T ss_pred CCCCCEEEEeCCCCcCCHHHHHHHHhccCc-ceeeeEEec-CCcceEEEEEEECCHHHHHHHHH-cCCCEE--CCEEEEE
Confidence 455679999999999999999999999984 578888776 68999999999999999999995 899999 7899999
Q ss_pred eecCCCC
Q 022077 158 NWASFGA 164 (303)
Q Consensus 158 ~~~~~~~ 164 (303)
.|++...
T Consensus 87 ~~s~~~~ 93 (102)
T d1weza_ 87 FLNSTAG 93 (102)
T ss_dssp EEECCCC
T ss_pred EEcCCCC
Confidence 9987553
No 141
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.69 E-value=2.6e-17 Score=116.62 Aligned_cols=80 Identities=11% Similarity=0.051 Sum_probs=70.4
Q ss_pred CCCceEEEcCCCccc-C----HHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCee
Q 022077 171 TPDHTIFVGDLAADV-T----DYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP 245 (303)
Q Consensus 171 ~~~~~l~v~nl~~~~-~----~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~ 245 (303)
..+++|||+||+.++ + +++|+++|+ .||.|+++++++. ++||||+|++.++|.+|++.|||..|+|+.
T Consensus 3 ~~~~~L~v~nl~~~v~~~d~~k~~l~~lF~-~~G~i~~~~~~k~------~~~afV~f~~~~~A~~Ai~~lng~~~~g~~ 75 (104)
T d1weya_ 3 SGSSGLIACVANDDVFSESETRAKFESLFR-TYDKDTTFQYFKS------FKRVRINFSNPLSAADARLRLHKTEFLGKE 75 (104)
T ss_dssp SCCCEEEEECCCGGGGSTTTHHHHHHHHHH-TTCSSCEEEEETT------TTEEEEECSSTTHHHHHHHTSTTSEETTEE
T ss_pred CCCceEEEEeCCchhcCcHHHHHHHHHHhc-ccccceEEEEecC------CCEEEEEECCHHHHHHHHHHhcccccCCCE
Confidence 356789999999986 3 256999998 9999999999744 679999999999999999999999999999
Q ss_pred eEEeecccCCCC
Q 022077 246 MRIGPATNKKTV 257 (303)
Q Consensus 246 l~v~~~~~~~~~ 257 (303)
|+|.|++.+...
T Consensus 76 l~v~~a~~~~~~ 87 (104)
T d1weya_ 76 MKLYFAQTLHIG 87 (104)
T ss_dssp CEEECCCCSSCC
T ss_pred eEEeecccCCCC
Confidence 999999876544
No 142
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=6.1e-17 Score=109.12 Aligned_cols=75 Identities=19% Similarity=0.329 Sum_probs=67.8
Q ss_pred CCcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEee
Q 022077 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLN 158 (303)
Q Consensus 79 ~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~ 158 (303)
...++|||+||+ +|+++|+++|++||.|.++.+.+++ |||||+|.+.++|.+|++.|||..+ .|+.|+|.
T Consensus 3 ~~~~ti~V~~~~--~te~~L~~~F~~~G~I~~v~~~~~~------~~afV~f~~~~~A~~Ai~~lng~~~--~g~~l~V~ 72 (79)
T d2bz2a1 3 RKGNTLYVYGED--MTPTLLRGAFSPFGNIIDLSMDPPR------NCAFVTYEKMESADQAVAELNGTQV--ESVQLKVN 72 (79)
T ss_dssp CCCCEEEEECSS--CCHHHHHHHHSTTCCCSCEEEETTT------TEEEEECSSHHHHHHHHHHHTTCBC--SSCBCEEE
T ss_pred CCCCEEEEECCC--CCHHHHHHHHhccCccceeeeccCC------CEEEEEEcccHHHHHHHHHhCCCEE--CCEEEEEE
Confidence 567899999995 8999999999999999999987643 6999999999999999999999999 78999999
Q ss_pred ecCCC
Q 022077 159 WASFG 163 (303)
Q Consensus 159 ~~~~~ 163 (303)
|+...
T Consensus 73 ~a~~~ 77 (79)
T d2bz2a1 73 IARKQ 77 (79)
T ss_dssp ECCSS
T ss_pred EecCC
Confidence 99643
No 143
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.69 E-value=5.9e-17 Score=107.87 Aligned_cols=74 Identities=19% Similarity=0.280 Sum_probs=66.3
Q ss_pred ceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEeeec
Q 022077 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWA 160 (303)
Q Consensus 82 ~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~~~ 160 (303)
++|||+|||.++++++|+++|+.||.|.++++.+++. ..++||||+|++.++|.+|+ .+++..| +++.|.|..+
T Consensus 1 Ttv~V~nlp~~~t~~~l~~~F~~~G~I~~v~~~~~~~--~~~~~afV~F~~~~~a~~Al-~~~~~~i--~g~~i~V~~~ 74 (75)
T d2ghpa2 1 TTVLVKNLPKSYNQNKVYKYFKHCGPIIHVDVADSLK--KNFRFARIEFARYDGALAAI-TKTHKVV--GQNEIIVSHL 74 (75)
T ss_dssp CEEEEEEECTTCCHHHHHHHHGGGSCEEEEEEEECTT--SSSEEEEEEESSHHHHHHHH-TTTTCEE--TTEECEEEEC
T ss_pred CEEEEECCCCCCCHHHHHHHHhcCCceEEEEEEeecc--ccceEEEEEEcchHHhHHHH-HhcCcEE--CCEEEEEEEC
Confidence 4899999999999999999999999999999999874 34579999999999999999 5899988 7888888754
No 144
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68 E-value=2.7e-17 Score=114.09 Aligned_cols=79 Identities=22% Similarity=0.431 Sum_probs=69.8
Q ss_pred CcceEEEcCCCccCCHHHHHH----HHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCcee
Q 022077 80 EIRTLWIGDLQYWMDETYLNT----CFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNF 155 (303)
Q Consensus 80 ~~~~l~v~nLp~~~t~~~l~~----~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i 155 (303)
++++|||+|||.++++++|++ +|++||.|.+|.+.+ +++++|||||+|.+.++|.+|++.++|..+ .++.|
T Consensus 2 P~~tl~V~nLp~~~t~~dl~~~l~~~f~~~G~i~~i~~~~---~~~~~g~afV~F~~~~~A~~A~~~~~~~~~--~g~~l 76 (91)
T d1nu4a_ 2 PNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSR---SLKMRGQAFVIFKEVSSATNALRSMQGFPF--YDKPM 76 (91)
T ss_dssp CCSEEEEESCCTTSCHHHHHHHHHHHHGGGSCEEEEECCH---HHHHTTCEEEEESSHHHHHHHHHHHTTCEE--TTEEC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHhcccccccceEEee---eccCCCceEEEECCHHHHHHHHHHhCCCEE--CCEEE
Confidence 358999999999999999865 579999999987754 467889999999999999999999999998 78999
Q ss_pred EeeecCCC
Q 022077 156 RLNWASFG 163 (303)
Q Consensus 156 ~v~~~~~~ 163 (303)
+|.|+...
T Consensus 77 ~v~~ak~~ 84 (91)
T d1nu4a_ 77 RIQYAKTD 84 (91)
T ss_dssp EEEECSSC
T ss_pred EEEEeCCC
Confidence 99998754
No 145
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68 E-value=3.9e-17 Score=110.29 Aligned_cols=74 Identities=20% Similarity=0.379 Sum_probs=66.0
Q ss_pred ceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCC-CCCCCCceeEeeec
Q 022077 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGT-PMPNGEQNFRLNWA 160 (303)
Q Consensus 82 ~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~-~~~~~~~~i~v~~~ 160 (303)
.+|||+|||.++|+++|+++|++||.|.++.+... +|||||+|.+.++|.+|++.|||. .+ .|+.|+|.|+
T Consensus 2 n~l~V~nLp~~~te~~L~~~F~~~G~i~~~~~~~~------rg~aFV~f~~~~~A~~Ai~~lng~~~~--~G~~i~V~~a 73 (80)
T d2cqha1 2 NKLYIGNLSPAVTADDLRQLFGDRKLPLAGQVLLK------SGYAFVDYPDQNWAIRAIETLSGKVEL--HGKIMEVDYS 73 (80)
T ss_dssp CCEEEECCCTTCCHHHHHHHHHHTTCCCSSCEEEE------TTEEEECCSCHHHHHHHHHHHTTTCEE--TTEECEEEEC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhCcEEEeEEecc------cceEEEEECCHHHHHHHHHHhCCCeEE--CCEEEEEEEc
Confidence 47999999999999999999999999887777654 479999999999999999999996 47 7899999998
Q ss_pred CCC
Q 022077 161 SFG 163 (303)
Q Consensus 161 ~~~ 163 (303)
...
T Consensus 74 ~~k 76 (80)
T d2cqha1 74 VSK 76 (80)
T ss_dssp CCC
T ss_pred CCc
Confidence 753
No 146
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68 E-value=1.7e-16 Score=108.85 Aligned_cols=76 Identities=18% Similarity=0.350 Sum_probs=68.0
Q ss_pred CcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEeee
Q 022077 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNW 159 (303)
Q Consensus 80 ~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~~ 159 (303)
..++|||+|||.++|+++|+++|+.||.+..+.+.+ ++|||||+|.+.++|.+|+..|+|..+ .++.|+|.|
T Consensus 7 ~~k~l~V~nLp~~~te~~l~~~F~~~g~i~~~~~~~------~rg~afV~f~~~~~A~~Ai~~l~~~~i--~g~~i~V~~ 78 (86)
T d2cpda1 7 SVKILYVRNLMLSTSEEMIEKEFNNIKPGAVERVKK------IRDYAFVHFSNREDAVEAMKALNGKVL--DGSPIEVTL 78 (86)
T ss_dssp CCCEEEEESCCTTCCHHHHHHHHHTTSTTCEEEEEE------CSSEEEEEESSHHHHHHHHHHHSSEEE--TTEEEEEEC
T ss_pred CCCEEEEcCCCCCCCHHHHHHhhcccceeeeEEEcc------ccEEEEEEeCCHHHHHHHHHHcCCCEE--CCEEEEEEe
Confidence 347899999999999999999999999988777644 457999999999999999999999999 789999999
Q ss_pred cCCC
Q 022077 160 ASFG 163 (303)
Q Consensus 160 ~~~~ 163 (303)
+...
T Consensus 79 akP~ 82 (86)
T d2cpda1 79 AKPV 82 (86)
T ss_dssp CCCC
T ss_pred ccCC
Confidence 8643
No 147
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=3.6e-17 Score=112.41 Aligned_cols=71 Identities=15% Similarity=0.256 Sum_probs=63.5
Q ss_pred ceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEeeecC
Q 022077 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS 161 (303)
Q Consensus 82 ~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~~~~ 161 (303)
.+|||+|||+++|+++|+++|++||.|.++.+.++ |||||+|.+.++|.+|++.|+|..+ .++.+++.++.
T Consensus 1 nrvfV~nlp~~~~~~~l~~~F~~~G~v~~~~i~~~-------g~afV~f~~~~~a~~Ai~~l~g~~~--~g~~i~v~~~~ 71 (87)
T d3begb1 1 NRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD-------GTGVVEFVRKEDMTYAVRKLDNTKF--RSHEGETAYIR 71 (87)
T ss_dssp CCEEEEECCSSCCTTHHHHHHGGGSCEEEEEECTT-------SEEEEEESSHHHHHHHHHHHTTCBC--CCTTSCCCBCE
T ss_pred CeEEEECCCCcCCHHHHHHHHhhhccccccccccc-------ceeeEEeCCHHHHHHHHHHhCCCEE--CCcEeEEeEEe
Confidence 36999999999999999999999999999987654 6999999999999999999999999 66777766654
No 148
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=4.2e-17 Score=115.90 Aligned_cols=80 Identities=8% Similarity=0.070 Sum_probs=70.5
Q ss_pred CCcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEee
Q 022077 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLN 158 (303)
Q Consensus 79 ~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~ 158 (303)
....+|||+|||+++|+++|+++|..||.+..+.++....+|+++|||||+|.+.++|.+|++ ++|..| .++.|.|.
T Consensus 6 ~~~~~v~v~nLp~~~t~~~l~~~F~~~g~i~~~~~~~~~~~g~~~G~afV~F~s~~~a~~Al~-~n~~~i--~gr~i~V~ 82 (103)
T d2cpya1 6 SAKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSER-LHRKKL--NGREAFVH 82 (103)
T ss_dssp SCCCEEEEESCCTTSCHHHHHHHTTTSCCCSTTEEECCCTTSSCSSCEEEECSSHHHHHHHGG-GCSEEE--TTEEEEEE
T ss_pred CCceEEEEeCCCCCCCHHHHhhhhcccceEEEEEEEEeCCCCCcCccEEEEECCHHHHHHHHh-cCCCeE--CCcEEEEE
Confidence 345689999999999999999999999998876566666689999999999999999999995 899999 78888888
Q ss_pred ecC
Q 022077 159 WAS 161 (303)
Q Consensus 159 ~~~ 161 (303)
+++
T Consensus 83 ~~~ 85 (103)
T d2cpya1 83 VVT 85 (103)
T ss_dssp EEC
T ss_pred ECC
Confidence 764
No 149
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=1.7e-16 Score=109.26 Aligned_cols=80 Identities=16% Similarity=0.197 Sum_probs=69.0
Q ss_pred CCCcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEe
Q 022077 78 PGEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRL 157 (303)
Q Consensus 78 ~~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v 157 (303)
...+++|||+|||.++++++|+++|++||.|.++++.+++ +||||+|.+.++|.+|++.+++..+...|+.|++
T Consensus 5 ~~Ps~~l~V~nLp~~~t~~~L~~~f~~~G~i~~v~~~~~~------~~afV~f~~~e~A~~a~~~~~~~~~~~~g~~l~v 78 (88)
T d2cq1a1 5 GAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGK------NQAFLELATEEAAITMVNYYSAVTPHLRNQPIYI 78 (88)
T ss_dssp SSCCSEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEETTT------TEEEEEESSHHHHHHHHHHHHHSCCEETTEECEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHhcccccccccccccc------eEEEEEeCCHHHHHHHHHHHccCCCccCCCEEEE
Confidence 4567899999999999999999999999999999988654 5999999999999999987654433338999999
Q ss_pred eecCCC
Q 022077 158 NWASFG 163 (303)
Q Consensus 158 ~~~~~~ 163 (303)
.|++..
T Consensus 79 ~~sk~~ 84 (88)
T d2cq1a1 79 QYSNHK 84 (88)
T ss_dssp EECSCS
T ss_pred EECCCC
Confidence 998754
No 150
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=1.3e-17 Score=118.22 Aligned_cols=76 Identities=13% Similarity=0.245 Sum_probs=70.8
Q ss_pred ceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEeec
Q 022077 174 HTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPA 251 (303)
Q Consensus 174 ~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~~~ 251 (303)
..++|+++..++++++|+++|+ +||.|++|+|.++. +++++|+|||+|++.++|.+|+..|||+.++||.|+|.|+
T Consensus 28 ~~~~v~~~~~~~~ed~l~e~f~-k~G~I~~v~I~~~~-~~~~~G~~fV~f~~~~~A~~Ai~~lng~~~~gr~i~v~~s 103 (104)
T d1jmta_ 28 SDVEMQEHYDEFFEEVFTEMEE-KYGEVEEMNVCDNL-GDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELS 103 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-HTCCEEEEEECCSS-SSSSEEEEEEEESCHHHHHHHHHHHTTCEETTEECCEEEC
T ss_pred chHHhhhhhhhhhHHHHHHHhc-cCCCEEEEEeecCC-CCCEeeEEEEEEechhHHHHHHHHHCCCEECCEEEEEEEC
Confidence 3578888888999999999998 99999999998774 8999999999999999999999999999999999999986
No 151
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.65 E-value=8.1e-16 Score=109.22 Aligned_cols=82 Identities=15% Similarity=0.103 Sum_probs=71.2
Q ss_pred CCcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEee
Q 022077 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLN 158 (303)
Q Consensus 79 ~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~ 158 (303)
..+++|||+|||.++|+++|+++|++||.|..+.+.+++ ++|||+|++.++|.+|++.|++..+...++.|+|.
T Consensus 13 ~ps~~l~v~nlp~~~te~~l~~~F~~fG~I~~~~~~~~k------~~AfV~f~~~e~A~~ai~~~~~~~~~~~g~~l~v~ 86 (104)
T d1wexa_ 13 SVSPVVHVRGLCESVVEADLVEALEKFGTICYVMMMPFK------RQALVEFENIDSAKECVTFAADVPVYIAGQQAFFN 86 (104)
T ss_dssp CCCSEEEEESCCSSCCHHHHHHHHTTTSCEEEEEEETTT------TEEEEEESSHHHHHHHHHHHHHSCCBSSSSBCEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHhhhhcccceEEEEEecc------eeEEEEeCCHHHHHHHHHHHcCCCcEEeeEEEEEE
Confidence 457899999999999999999999999999999987653 69999999999999999988665555589999999
Q ss_pred ecCCCCCC
Q 022077 159 WASFGAGE 166 (303)
Q Consensus 159 ~~~~~~~~ 166 (303)
|++.....
T Consensus 87 ~s~~~~~~ 94 (104)
T d1wexa_ 87 YSTSKRIT 94 (104)
T ss_dssp ECSSSSCC
T ss_pred EcCCCccC
Confidence 99765443
No 152
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=3.5e-18 Score=118.49 Aligned_cols=77 Identities=17% Similarity=0.390 Sum_probs=67.8
Q ss_pred ceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEE-----eeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEE
Q 022077 174 HTIFVGDLAADVTDYMLQETFRARYPSTKGAKVV-----IDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI 248 (303)
Q Consensus 174 ~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~-----~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v 248 (303)
++|||+|||.++++++|+++|+ .||.|..+.+. .+..+++++|||||+|++.++|.+|+. |||..+.|+.|+|
T Consensus 2 RrlyVgNLp~~~te~~l~~~F~-~~g~~~~~~~~~~~~~~~~~~~~~kg~afV~f~~~e~a~~a~~-l~g~~~~Gr~l~V 79 (90)
T d1u2fa_ 2 RRLYVGNIPFGITEEAMMDFFN-AQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMA-FDGIIFQGQSLKI 79 (90)
T ss_dssp CEEEECSCCTTCCTTHHHHHHH-HHHTTTTSCCSSSCSEEECCEETTTTEEEEEESSCTTTTTGGG-GSSCCSSSSCCCC
T ss_pred CEEEEcCCCCccchHHHHHHHH-hhCcEEEEEEeccceeeecccCCCceEEEEEeCCHHHHHHHHh-hCCcEECCEEEEE
Confidence 6899999999999999999998 99998876553 444577889999999999999999985 9999999999999
Q ss_pred eecc
Q 022077 249 GPAT 252 (303)
Q Consensus 249 ~~~~ 252 (303)
+.++
T Consensus 80 ~r~k 83 (90)
T d1u2fa_ 80 RRPH 83 (90)
T ss_dssp BCTT
T ss_pred CCCC
Confidence 7544
No 153
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=1.3e-16 Score=114.97 Aligned_cols=80 Identities=18% Similarity=0.206 Sum_probs=70.6
Q ss_pred CCcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEee
Q 022077 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLN 158 (303)
Q Consensus 79 ~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~ 158 (303)
...++|||+|||+++|+++|+++|+.||.+..+.++.+..+|.++|+|||+|.+.++|.+|++ +||..| +++.|.|.
T Consensus 16 ~~~~~i~v~nLp~~~t~~di~~~F~~~g~~~~~~~~~~~~~g~~~G~afVeF~~~e~a~~al~-~~~~~i--~gR~i~V~ 92 (112)
T d1wela1 16 EAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC-RHKQYM--GNRFIQVH 92 (112)
T ss_dssp CCCCEEEEECCCTTCCHHHHHHHSCSSCBCTTTCEEEECTTSSEEEEEEEEBSSSHHHHHHHT-SCSBCS--TTSCBEEE
T ss_pred CCCeEEEEecCCCcCcHHHHhhHHhhccccccceeeecCcccceeeEEEEEECCHHHHHHHHH-cCCCcC--CCEEEEEE
Confidence 456789999999999999999999999998776666666689999999999999999999995 899999 78888887
Q ss_pred ecC
Q 022077 159 WAS 161 (303)
Q Consensus 159 ~~~ 161 (303)
++.
T Consensus 93 ~~~ 95 (112)
T d1wela1 93 PIT 95 (112)
T ss_dssp EEC
T ss_pred EcC
Confidence 654
No 154
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.64 E-value=5.5e-16 Score=103.09 Aligned_cols=71 Identities=14% Similarity=0.235 Sum_probs=62.9
Q ss_pred EEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEeeecCCC
Q 022077 84 LWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFG 163 (303)
Q Consensus 84 l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~~~~~~ 163 (303)
|||+|||.++++++|+++|++|| +..+.+ ++++|||||+|.+.++|.+|++.|||..+ .|+.++|+|+..+
T Consensus 1 i~V~nLp~~~t~~~l~~~F~~~g-~~~~~~------~~~~g~afv~f~~~~~A~~Ai~~ln~~~~--~g~~l~V~~a~~d 71 (75)
T d1wi6a1 1 ILIRGLPGDVTNQEVHDLLSDYE-LKYCFV------DKYKGTAFVTLLNGEQAEAAINTFHQSRL--RERELSVQLQPTD 71 (75)
T ss_dssp EEEECCCTTCCHHHHHHHTTTSC-EEEEEE------ETTTTEEEEEESSHHHHHHHHHHHTTEES--SSCEEEEEECCST
T ss_pred CEEeCCCCcCCHHHHHHHHhccc-ccceee------cccceeEEEEECCHHHHHHHHHHhCCccC--CCCEEEEEEeCCC
Confidence 79999999999999999999999 444443 34668999999999999999999999999 7899999999754
No 155
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.64 E-value=5.1e-16 Score=108.84 Aligned_cols=74 Identities=15% Similarity=0.241 Sum_probs=66.0
Q ss_pred CCcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEee
Q 022077 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLN 158 (303)
Q Consensus 79 ~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~ 158 (303)
...++|||+|||+++++++|+++|++||.|.++.+.+ +|||||+|.+.++|.+|++.|||..| .++.+++.
T Consensus 13 ~~~~~i~V~Nlp~~~~~~~L~~~F~~~G~v~~~~i~~-------~g~afV~f~~~~~a~~Ai~~lng~~~--~g~~i~v~ 83 (98)
T d1wg4a_ 13 RSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQK-------DGMGMVEYLRKEDMEYALRKLDDTKF--RSHEGETS 83 (98)
T ss_dssp SCSCEEEEECCCSSCCHHHHHHHHTTSSCEEEEEEET-------TTEEEEEESSHHHHHHHHHHHSSEEE--ECTTSCEE
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHhhcccccccccc-------cceEEEEECCHHHHHHHHHHhCCCEe--CCeEEEEE
Confidence 3457899999999999999999999999999998864 36999999999999999999999999 67777777
Q ss_pred ecC
Q 022077 159 WAS 161 (303)
Q Consensus 159 ~~~ 161 (303)
+..
T Consensus 84 ~~~ 86 (98)
T d1wg4a_ 84 YIR 86 (98)
T ss_dssp EEE
T ss_pred EEe
Confidence 764
No 156
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.63 E-value=1.8e-16 Score=109.12 Aligned_cols=76 Identities=16% Similarity=0.227 Sum_probs=66.1
Q ss_pred CCcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEee
Q 022077 79 GEIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLN 158 (303)
Q Consensus 79 ~~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~ 158 (303)
..+++|||+|||+++|+++|+++|++||.|.++++.. .++|||||+|.+.++|++|+. ++..+ .++.|+|.
T Consensus 3 ~~s~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~~~~-----~~~gfafV~f~~~~~a~~a~~--~~~~i--~g~~l~v~ 73 (88)
T d1wf0a_ 3 SGSSGVFVGRCTGDMTEDELREFFSQYGDVMDVFIPK-----PFRAFAFVTFADDQIAQSLCG--EDLII--KGISVHIS 73 (88)
T ss_dssp SCCCEEEEESCCSSSCHHHHHHHSTTTSCCCEEECCS-----SCCSCCEEECSCHHHHHHTTT--CEEEE--TTEEEEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHcCCceEEEEee-----ccCceEEEEECCHHHHHHHHh--CCCEE--CCEEeEEE
Confidence 4568999999999999999999999999999987643 456899999999999999984 77777 78999999
Q ss_pred ecCCC
Q 022077 159 WASFG 163 (303)
Q Consensus 159 ~~~~~ 163 (303)
|+...
T Consensus 74 ~a~~k 78 (88)
T d1wf0a_ 74 NAEPK 78 (88)
T ss_dssp CCCCC
T ss_pred eCCCC
Confidence 98644
No 157
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.63 E-value=5e-16 Score=106.72 Aligned_cols=75 Identities=8% Similarity=0.092 Sum_probs=65.1
Q ss_pred CcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEeee
Q 022077 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNW 159 (303)
Q Consensus 80 ~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~~ 159 (303)
.+++|||+|||.++++++|+++|++||. ..+.+ ++.+|||||+|.+.++|++|++.|||..+ .++.|+|.|
T Consensus 4 ~s~~i~V~nLp~~~t~~~l~~lF~~~G~-~~~~~------~~~kg~afV~f~~~~~A~~Ai~~ln~~~~--~G~~l~V~~ 74 (88)
T d1wg1a_ 4 GSSGILVKNLPQDSNCQEVHDLLKDYDL-KYCYV------DRNKRTAFVTLLNGEQAQNAIQMFHQYSF--RGKDLIVQL 74 (88)
T ss_dssp CCCCEEEESCCSSCCHHHHHHHTCSSCC-CCEEE------EGGGTEEEECCSCHHHHHHHHHHHTTEEE--TTEEEEEEE
T ss_pred CCCEEEEeCCCCccChHHHHHHHHhcCc-eeeee------eccCCceEEEECCHHHHHHHHHHhCCCEE--CCEEEEEEE
Confidence 4578999999999999999999999993 33333 34568999999999999999999999999 899999999
Q ss_pred cCCC
Q 022077 160 ASFG 163 (303)
Q Consensus 160 ~~~~ 163 (303)
+...
T Consensus 75 a~~~ 78 (88)
T d1wg1a_ 75 QPTD 78 (88)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 8654
No 158
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.61 E-value=1.8e-15 Score=106.24 Aligned_cols=78 Identities=13% Similarity=0.115 Sum_probs=67.6
Q ss_pred CCCcceEEEcCCCcc-CCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHH--hCCCCCCCCCce
Q 022077 78 PGEIRTLWIGDLQYW-MDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQT--FNGTPMPNGEQN 154 (303)
Q Consensus 78 ~~~~~~l~v~nLp~~-~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~--l~g~~~~~~~~~ 154 (303)
...+++|||+|||.+ +|+++|+++|+.||.|.++.+.+++ |||||+|.+.++|.+|++. +++..+ .|+.
T Consensus 15 ~~~~~~l~v~nLp~~~~te~~l~~~F~~fG~V~~v~~~~~k------~~afV~f~~~~~A~~Ai~~~~~~~~~~--~gr~ 86 (99)
T d1x4fa1 15 QELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRMK------SQAFIEMETREDAMAMVDHCLKKALWF--QGRC 86 (99)
T ss_dssp SCCCCEEEEESCCCSSCCSHHHHTTTTTTSCCSEEEEETTT------TEEEEECSSHHHHHHHHHHHHHSCCCS--SSSC
T ss_pred CCCCCEEEEeCCcCCccCHHHHHhhhccccceeEEEEeecC------CcEEEEecchHHHHHHHHHHhcCCceE--CCEE
Confidence 456689999999975 8999999999999999999998654 6999999999999999974 566666 8899
Q ss_pred eEeeecCCC
Q 022077 155 FRLNWASFG 163 (303)
Q Consensus 155 i~v~~~~~~ 163 (303)
|+|.|+...
T Consensus 87 l~V~~s~~~ 95 (99)
T d1x4fa1 87 VKVDLSEKY 95 (99)
T ss_dssp CEEEEECSC
T ss_pred EEEEEcCCc
Confidence 999998654
No 159
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.61 E-value=6.2e-16 Score=106.37 Aligned_cols=81 Identities=16% Similarity=0.105 Sum_probs=69.2
Q ss_pred CCCCcceEEEcCCCcc-CCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCcee
Q 022077 77 QPGEIRTLWIGDLQYW-MDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNF 155 (303)
Q Consensus 77 ~~~~~~~l~v~nLp~~-~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i 155 (303)
..+.+++|||+||+.. +|+++|.++|+.||.|.++.+.+++ ++|||+|++.++|.+|++.|++..+...|+.+
T Consensus 4 ~~~~sr~v~v~nl~~~~~t~~eL~~lF~~fG~I~~i~i~~~k------~~afV~f~~~~~A~~A~~~l~~~~~~~~gr~l 77 (89)
T d1x4da1 4 RVETRRVVHIMDFQRGKNLRYQLLQLVEPFGVISNHLILNKI------NEAFIEMATTEDAQAAVDYYTTTPALVFGKPV 77 (89)
T ss_dssp CCCCCCEEEEESCCCSSSHHHHHHTTTGGGSCEEEEEECSSS------SCEEEEESSHHHHHHHHHHHHHSCCEETTEEC
T ss_pred CCCCCcEEEEECCCCCcCCHHHHHHHHHhhCCeEEEEeeccc------eEEEEEEcchhhHHHHHHHHhhCCCccCCceE
Confidence 4567899999999986 7899999999999999999998765 48999999999999999977544433389999
Q ss_pred EeeecCCC
Q 022077 156 RLNWASFG 163 (303)
Q Consensus 156 ~v~~~~~~ 163 (303)
+|.|+...
T Consensus 78 ~V~~s~~~ 85 (89)
T d1x4da1 78 RVHLSQKY 85 (89)
T ss_dssp EEEEECCC
T ss_pred EEEECCCc
Confidence 99998743
No 160
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=5.3e-17 Score=112.42 Aligned_cols=77 Identities=18% Similarity=0.358 Sum_probs=66.1
Q ss_pred ceEEEcCCCccCCHHHHHHHHhhcCCceEEEEE-----ecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeE
Q 022077 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVI-----RNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFR 156 (303)
Q Consensus 82 ~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~-----~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~ 156 (303)
++|||||||.++|+++|+++|+.||.+.++.+. .+..+++++|||||+|.+.++|++|+ .|||..+ .|+.|+
T Consensus 2 RrlyVgNLp~~~te~~l~~~F~~~g~~~~~~~~~~~~~~~~~~~~~kg~afV~f~~~e~a~~a~-~l~g~~~--~Gr~l~ 78 (90)
T d1u2fa_ 2 RRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAM-AFDGIIF--QGQSLK 78 (90)
T ss_dssp CEEEECSCCTTCCTTHHHHHHHHHHTTTTSCCSSSCSEEECCEETTTTEEEEEESSCTTTTTGG-GGSSCCS--SSSCCC
T ss_pred CEEEEcCCCCccchHHHHHHHHhhCcEEEEEEeccceeeecccCCCceEEEEEeCCHHHHHHHH-hhCCcEE--CCEEEE
Confidence 789999999999999999999999987665443 34557789999999999999999998 4999999 678888
Q ss_pred eeecC
Q 022077 157 LNWAS 161 (303)
Q Consensus 157 v~~~~ 161 (303)
|.+.+
T Consensus 79 V~r~k 83 (90)
T d1u2fa_ 79 IRRPH 83 (90)
T ss_dssp CBCTT
T ss_pred ECCCC
Confidence 87544
No 161
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=2.9e-15 Score=105.39 Aligned_cols=65 Identities=20% Similarity=0.304 Sum_probs=58.5
Q ss_pred CCCCceEEEcC--CCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCcee
Q 022077 170 DTPDHTIFVGD--LAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC 241 (303)
Q Consensus 170 ~~~~~~l~v~n--l~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~ 241 (303)
..++++|+|+| |+.++++++|+++|+ +||.|+++++..+ ++||||+|++.++|.+|+..|||+.+
T Consensus 15 ~~pt~~l~V~ng~L~~~vte~~L~~~F~-~~G~i~~i~~~~~------k~~aFV~f~~~e~A~~A~~~lng~~i 81 (101)
T d2cq2a1 15 SYATQSLVVANGGLGNGVSRNQLLPVLE-KCGLVDALLMPPN------KPYSFARYRTTEESKRAYVTLNGKEV 81 (101)
T ss_dssp SSCCSEEEEETCTGGGTCCHHHHHHHHH-HHSCEEEEECCTT------CSCEEEEESSHHHHHHHHHHTTTCEE
T ss_pred CCCCceEEEECCCCCCCCCHHHHHHHHH-hhCcccEEeeccC------ccEEEEEECCHHHHHHHHHHhCCCCC
Confidence 45678899955 999999999999998 9999999988654 67999999999999999999999886
No 162
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=1.6e-14 Score=101.19 Aligned_cols=81 Identities=11% Similarity=0.186 Sum_probs=69.4
Q ss_pred CCCCceEEEcCC--Cccc---------CHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCC
Q 022077 170 DTPDHTIFVGDL--AADV---------TDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 238 (303)
Q Consensus 170 ~~~~~~l~v~nl--~~~~---------~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g 238 (303)
...+++|+|.|+ +.++ .++||++.|+ +||.|..+.+..+ ..+|+|||+|++.++|.+|+..|||
T Consensus 5 ~~~~r~v~l~nmf~~~~~~~~~~~~~~i~edv~~~~~-~~G~V~~v~~~~~----~~~G~~fV~f~~~e~A~~A~~~lng 79 (99)
T d2dita1 5 MRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECS-KFGQIRKLLLFDR----HPDGVASVSFRDPEEADYCIQTLDG 79 (99)
T ss_dssp CCSCCEEEEESSCCTTHHHHCSHHHHHHHHHHHHHGG-GTSCCSEEEEETT----CTTCEEEEECSCHHHHHHHHHHSTT
T ss_pred CCCccEEEEccCCCHHHhhcchHHHHHHHHHHHHHhc-CcccEEEEeccCC----CCccEEEEEECCHHHHHHHHHHhCC
Confidence 355789999999 4432 2378999998 9999999988654 4579999999999999999999999
Q ss_pred ceeCCeeeEEeecccCC
Q 022077 239 VFCSTRPMRIGPATNKK 255 (303)
Q Consensus 239 ~~~~g~~l~v~~~~~~~ 255 (303)
+.++||.|+|.|...+.
T Consensus 80 ~~~~gr~i~v~~~~g~~ 96 (99)
T d2dita1 80 RWFGGRQITAQAWDGTT 96 (99)
T ss_dssp CEETTEECEEEECCSCC
T ss_pred cEECCEEEEEEEeCCcC
Confidence 99999999999988764
No 163
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.54 E-value=6.9e-15 Score=103.94 Aligned_cols=79 Identities=11% Similarity=-0.005 Sum_probs=68.2
Q ss_pred CCcceEEEcCCCccC-CH----HHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCc
Q 022077 79 GEIRTLWIGDLQYWM-DE----TYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQ 153 (303)
Q Consensus 79 ~~~~~l~v~nLp~~~-t~----~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~ 153 (303)
...++|||+||+.++ ++ ++|+++|+.||.|.+++++++ ++||||+|.+.++|.+|++.|||..+ .++
T Consensus 3 ~~~~~L~v~nl~~~v~~~d~~k~~l~~lF~~~G~i~~~~~~k~------~~~afV~f~~~~~A~~Ai~~lng~~~--~g~ 74 (104)
T d1weya_ 3 SGSSGLIACVANDDVFSESETRAKFESLFRTYDKDTTFQYFKS------FKRVRINFSNPLSAADARLRLHKTEF--LGK 74 (104)
T ss_dssp SCCCEEEEECCCGGGGSTTTHHHHHHHHHHTTCSSCEEEEETT------TTEEEEECSSTTHHHHHHHTSTTSEE--TTE
T ss_pred CCCceEEEEeCCchhcCcHHHHHHHHHHhcccccceEEEEecC------CCEEEEEECCHHHHHHHHHHhccccc--CCC
Confidence 356789999999886 33 568999999999999999864 46999999999999999999999999 889
Q ss_pred eeEeeecCCCCC
Q 022077 154 NFRLNWASFGAG 165 (303)
Q Consensus 154 ~i~v~~~~~~~~ 165 (303)
.|+|.|+.....
T Consensus 75 ~l~v~~a~~~~~ 86 (104)
T d1weya_ 75 EMKLYFAQTLHI 86 (104)
T ss_dssp ECEEECCCCSSC
T ss_pred EeEEeecccCCC
Confidence 999999965433
No 164
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=9.4e-15 Score=103.46 Aligned_cols=83 Identities=13% Similarity=0.124 Sum_probs=70.2
Q ss_pred CCCceEEEcCC--Cccc--------CHHHHHHHHhhhCCCcceEEEEeeCCCC--CceeEEEEEeCCHHHHHHHHHHhCC
Q 022077 171 TPDHTIFVGDL--AADV--------TDYMLQETFRARYPSTKGAKVVIDRLTG--RTKGYGFVRFGDESEQLRAMTEMNG 238 (303)
Q Consensus 171 ~~~~~l~v~nl--~~~~--------~~~~l~~~f~~~~G~i~~~~i~~~~~~~--~~~g~afV~f~~~~~A~~A~~~l~g 238 (303)
.++++|.|.|+ +.++ ..+||++.|+ +||.|++|.|.++..+. ...|++||+|.+.++|.+|+..|||
T Consensus 2 ~Ps~vl~l~N~~~~~~l~~~~~~~~i~edi~~e~~-k~G~v~~v~I~~~~~~~~~~~~g~vfV~f~~~e~A~~A~~~l~G 80 (104)
T d1o0pa_ 2 HPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECS-KYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTG 80 (104)
T ss_dssp CCCSEEEEESSCCTTTTTSHHHHHHHHHHHHHHHT-TTSCEEEEECCCCTTSSSCTTCCEEEEEESCHHHHHHHHHHHSS
T ss_pred CCCcEEEEeCCCCHHHcCCchhHHHHHHHHHHHhc-ccCceEEEEEeecCCCCccCCceEEEEEECCHHHHHHHHHHHCC
Confidence 46789999999 3333 3468999998 99999999998876432 3468999999999999999999999
Q ss_pred ceeCCeeeEEeecccC
Q 022077 239 VFCSTRPMRIGPATNK 254 (303)
Q Consensus 239 ~~~~g~~l~v~~~~~~ 254 (303)
+.++||.|+|.|....
T Consensus 81 r~f~gR~v~v~f~~~~ 96 (104)
T d1o0pa_ 81 RKFANRVVVTKYCDPD 96 (104)
T ss_dssp CCSSSSCCEEEEECHH
T ss_pred CEECCeEEEEEEcCHH
Confidence 9999999999998753
No 165
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=1.4e-15 Score=107.56 Aligned_cols=76 Identities=16% Similarity=0.160 Sum_probs=70.2
Q ss_pred ceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEeeec
Q 022077 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWA 160 (303)
Q Consensus 82 ~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~~~ 160 (303)
..++|+++..++++++|+++|++||.|.+|++.++. +|+++|||||+|.+.++|.+|++.|||+.+ .|+.|++.++
T Consensus 28 ~~~~v~~~~~~~~ed~l~e~f~k~G~I~~v~I~~~~-~~~~~G~~fV~f~~~~~A~~Ai~~lng~~~--~gr~i~v~~s 103 (104)
T d1jmta_ 28 SDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNL-GDHLVGNVYVKFRREEDAEKAVIDLNNRWF--NGQPIHAELS 103 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECCSS-SSSSEEEEEEEESCHHHHHHHHHHHTTCEE--TTEECCEEEC
T ss_pred chHHhhhhhhhhhHHHHHHHhccCCCEEEEEeecCC-CCCEeeEEEEEEechhHHHHHHHHHCCCEE--CCEEEEEEEC
Confidence 468889999999999999999999999999998775 799999999999999999999999999999 7888888875
No 166
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=1e-14 Score=104.90 Aligned_cols=75 Identities=19% Similarity=0.116 Sum_probs=65.7
Q ss_pred CceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCH-HHHHHHHHHhCCceeCCeeeEEeec
Q 022077 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDE-SEQLRAMTEMNGVFCSTRPMRIGPA 251 (303)
Q Consensus 173 ~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~-~~A~~A~~~l~g~~~~g~~l~v~~~ 251 (303)
...+|||||+.++|+++|+++|+ .||.|.+|.|+.+ +|||||+|.+. ++|.+|+..|++..+.++.+.|.|+
T Consensus 11 ~~~~fvgnL~~~~tee~Lk~~F~-~fG~V~~v~i~~~------kg~gfV~F~~~~~~A~~a~~~~~~~~l~~~~~~v~~~ 83 (113)
T d1owxa_ 11 CLLKFSGDLDDQTCREDLHILFS-NHGEIKWIDFVRG------AKEGIILFKEKAKEALGKAKDANNGNLQLRNKEVTWE 83 (113)
T ss_dssp CEEEEEESCCSSCCHHHHHHHTC-SSCCEEEEECCTT------CSEEEEEESSCHHHHHHHHHHTTTSCBCTTSSSEEEE
T ss_pred CeEEEECCCCCCCCHHHHHHHHH-hcCChheEEEecC------CceEEEEecCcHHHHHHHHHHhcCCceecCceEEEEe
Confidence 34569999999999999999998 9999999999754 78999999985 7899999999999988888888776
Q ss_pred ccC
Q 022077 252 TNK 254 (303)
Q Consensus 252 ~~~ 254 (303)
..+
T Consensus 84 ~~~ 86 (113)
T d1owxa_ 84 VLE 86 (113)
T ss_dssp ECC
T ss_pred ecc
Confidence 654
No 167
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.47 E-value=3.9e-14 Score=94.95 Aligned_cols=73 Identities=16% Similarity=0.299 Sum_probs=61.9
Q ss_pred CceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCee-eEEeec
Q 022077 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRP-MRIGPA 251 (303)
Q Consensus 173 ~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~-l~v~~~ 251 (303)
.+.|+|+++|.+.+++.| ++|+ .||.|.++++. +.++||||+|++.++|++|++ +||..++|+. |.|...
T Consensus 4 ~~wV~V~G~p~~~~~~il-~~F~-~~G~I~~~~~~------~~~~~~fV~f~~~~~A~~Al~-~nG~~~~g~~~vgV~~~ 74 (81)
T d1wwha1 4 DTWVTVFGFPQASASYIL-LQFA-QYGNILKHVMS------NTGNWMHIRYQSKLQARKALS-KDGRIFGESIMIGVKPC 74 (81)
T ss_dssp GGEEEEECCCGGGHHHHH-HHHH-TTSCEEEEEEC------SSSSEEEEEESSHHHHHHHHT-TTTCEETTTEECEEEEC
T ss_pred ccEEEEECCChHHHHHHH-HHHH-hhhhhheEEec------CCCCEEEEEEcccHHHHHHHh-cCCCeECCcEEEEEEeC
Confidence 467999999999986655 5798 99999999874 347899999999999999995 8999999985 578877
Q ss_pred ccC
Q 022077 252 TNK 254 (303)
Q Consensus 252 ~~~ 254 (303)
..|
T Consensus 75 ~~k 77 (81)
T d1wwha1 75 IDK 77 (81)
T ss_dssp CCH
T ss_pred CCh
Confidence 655
No 168
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.47 E-value=6.9e-14 Score=98.21 Aligned_cols=73 Identities=23% Similarity=0.302 Sum_probs=60.7
Q ss_pred CCcceEEE--cCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCC-CCCCcee
Q 022077 79 GEIRTLWI--GDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPM-PNGEQNF 155 (303)
Q Consensus 79 ~~~~~l~v--~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~-~~~~~~i 155 (303)
...++||| |||+.++|+++|+++|++||.|.++.+.+++ +||||+|.+.++|.+|++.|||..+ ++.+..+
T Consensus 16 ~pt~~l~V~ng~L~~~vte~~L~~~F~~~G~i~~i~~~~~k------~~aFV~f~~~e~A~~A~~~lng~~i~~~~~~~i 89 (101)
T d2cq2a1 16 YATQSLVVANGGLGNGVSRNQLLPVLEKCGLVDALLMPPNK------PYSFARYRTTEESKRAYVTLNGKEVVDDLGQKI 89 (101)
T ss_dssp SCCSEEEEETCTGGGTCCHHHHHHHHHHHSCEEEEECCTTC------SCEEEEESSHHHHHHHHHHTTTCEEECTTSCEE
T ss_pred CCCceEEEECCCCCCCCCHHHHHHHHHhhCcccEEeeccCc------cEEEEEECCHHHHHHHHHHhCCCCCCCCCCcEE
Confidence 44578888 5599999999999999999999999887654 5999999999999999999999886 3334444
Q ss_pred Ee
Q 022077 156 RL 157 (303)
Q Consensus 156 ~v 157 (303)
.+
T Consensus 90 ~~ 91 (101)
T d2cq2a1 90 TL 91 (101)
T ss_dssp EC
T ss_pred EE
Confidence 33
No 169
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.45 E-value=1.4e-13 Score=98.88 Aligned_cols=73 Identities=18% Similarity=0.183 Sum_probs=62.1
Q ss_pred cceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccH-HHHHHHHHHhCCCCCCCCCceeEeee
Q 022077 81 IRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISR-AGAERVLQTFNGTPMPNGEQNFRLNW 159 (303)
Q Consensus 81 ~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~-~~a~~a~~~l~g~~~~~~~~~i~v~~ 159 (303)
...+|||||+..+|+++|+++|++||.|.+|.++++ +|||||.|.+. ++|.+|+..+++..+.+.+..+.+.+
T Consensus 11 ~~~~fvgnL~~~~tee~Lk~~F~~fG~V~~v~i~~~------kg~gfV~F~~~~~~A~~a~~~~~~~~l~~~~~~v~~~~ 84 (113)
T d1owxa_ 11 CLLKFSGDLDDQTCREDLHILFSNHGEIKWIDFVRG------AKEGIILFKEKAKEALGKAKDANNGNLQLRNKEVTWEV 84 (113)
T ss_dssp CEEEEEESCCSSCCHHHHHHHTCSSCCEEEEECCTT------CSEEEEEESSCHHHHHHHHHHTTTSCBCTTSSSEEEEE
T ss_pred CeEEEECCCCCCCCHHHHHHHHHhcCChheEEEecC------CceEEEEecCcHHHHHHHHHHhcCCceecCceEEEEee
Confidence 455699999999999999999999999999999865 47999999985 78889999999999866555555544
No 170
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.26 E-value=5.5e-12 Score=88.89 Aligned_cols=80 Identities=14% Similarity=0.147 Sum_probs=66.5
Q ss_pred CcceEEEcCC--CccC--------CHHHHHHHHhhcCCceEEEEEecCCC--CCcccEEEEEEccHHHHHHHHHHhCCCC
Q 022077 80 EIRTLWIGDL--QYWM--------DETYLNTCFAHTGEVVAVKVIRNKQT--GQIEGYGFIEFISRAGAERVLQTFNGTP 147 (303)
Q Consensus 80 ~~~~l~v~nL--p~~~--------t~~~l~~~f~~~g~i~~~~~~~~~~~--~~~~g~afv~f~~~~~a~~a~~~l~g~~ 147 (303)
+++.|.|.|+ +..+ ..++|++.|++||.|.++.+.++..+ ....|++||+|.+.++|.+|++.|+|+.
T Consensus 3 Ps~vl~l~N~~~~~~l~~~~~~~~i~edi~~e~~k~G~v~~v~I~~~~~~~~~~~~g~vfV~f~~~e~A~~A~~~l~Gr~ 82 (104)
T d1o0pa_ 3 PTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRK 82 (104)
T ss_dssp CCSEEEEESSCCTTTTTSHHHHHHHHHHHHHHHTTTSCEEEEECCCCTTSSSCTTCCEEEEEESCHHHHHHHHHHHSSCC
T ss_pred CCcEEEEeCCCCHHHcCCchhHHHHHHHHHHHhcccCceEEEEEeecCCCCccCCceEEEEEECCHHHHHHHHHHHCCCE
Confidence 4678999999 4333 34578999999999999999886644 3456899999999999999999999999
Q ss_pred CCCCCceeEeeecC
Q 022077 148 MPNGEQNFRLNWAS 161 (303)
Q Consensus 148 ~~~~~~~i~v~~~~ 161 (303)
+ .|+.|++.+..
T Consensus 83 f--~gR~v~v~f~~ 94 (104)
T d1o0pa_ 83 F--ANRVVVTKYCD 94 (104)
T ss_dssp S--SSSCCEEEEEC
T ss_pred E--CCeEEEEEEcC
Confidence 9 78999988765
No 171
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.25 E-value=7.9e-12 Score=83.45 Aligned_cols=71 Identities=15% Similarity=0.150 Sum_probs=57.5
Q ss_pred CcceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCc-eeEee
Q 022077 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQ-NFRLN 158 (303)
Q Consensus 80 ~~~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~-~i~v~ 158 (303)
+.+.|+|+++|++++++.| +.|++||.|.++++.+ .++||||+|.+.++|++|++ +||..+ .++ .+.|.
T Consensus 3 ~~~wV~V~G~p~~~~~~il-~~F~~~G~I~~~~~~~------~~~~~fV~f~~~~~A~~Al~-~nG~~~--~g~~~vgV~ 72 (81)
T d1wwha1 3 DDTWVTVFGFPQASASYIL-LQFAQYGNILKHVMSN------TGNWMHIRYQSKLQARKALS-KDGRIF--GESIMIGVK 72 (81)
T ss_dssp GGGEEEEECCCGGGHHHHH-HHHHTTSCEEEEEECS------SSSEEEEEESSHHHHHHHHT-TTTCEE--TTTEECEEE
T ss_pred cccEEEEECCChHHHHHHH-HHHHhhhhhheEEecC------CCCEEEEEEcccHHHHHHHh-cCCCeE--CCcEEEEEE
Confidence 4578999999999986555 5799999999987643 35799999999999999995 899998 454 34565
Q ss_pred ec
Q 022077 159 WA 160 (303)
Q Consensus 159 ~~ 160 (303)
.+
T Consensus 73 ~~ 74 (81)
T d1wwha1 73 PC 74 (81)
T ss_dssp EC
T ss_pred eC
Confidence 44
No 172
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.24 E-value=1.6e-11 Score=85.61 Aligned_cols=79 Identities=14% Similarity=0.146 Sum_probs=66.5
Q ss_pred CCCcceEEEcCC--CccC---------CHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCC
Q 022077 78 PGEIRTLWIGDL--QYWM---------DETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGT 146 (303)
Q Consensus 78 ~~~~~~l~v~nL--p~~~---------t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~ 146 (303)
...+++|+|.|+ +.++ .+++|++.|++||.|..+.+..+ ..+|+|||+|++.++|.+|+..|||+
T Consensus 5 ~~~~r~v~l~nmf~~~~~~~~~~~~~~i~edv~~~~~~~G~V~~v~~~~~----~~~G~~fV~f~~~e~A~~A~~~lng~ 80 (99)
T d2dita1 5 MRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDR----HPDGVASVSFRDPEEADYCIQTLDGR 80 (99)
T ss_dssp CCSCCEEEEESSCCTTHHHHCSHHHHHHHHHHHHHGGGTSCCSEEEEETT----CTTCEEEEECSCHHHHHHHHHHSTTC
T ss_pred CCCccEEEEccCCCHHHhhcchHHHHHHHHHHHHHhcCcccEEEEeccCC----CCccEEEEEECCHHHHHHHHHHhCCc
Confidence 456789999999 5432 23678899999999999987665 35689999999999999999999999
Q ss_pred CCCCCCceeEeeecCC
Q 022077 147 PMPNGEQNFRLNWASF 162 (303)
Q Consensus 147 ~~~~~~~~i~v~~~~~ 162 (303)
.+ .|+.|++.+...
T Consensus 81 ~~--~gr~i~v~~~~g 94 (99)
T d2dita1 81 WF--GGRQITAQAWDG 94 (99)
T ss_dssp EE--TTEECEEEECCS
T ss_pred EE--CCEEEEEEEeCC
Confidence 99 889999998753
No 173
>d2dgxa1 d.58.7.1 (A:563-635) Limkain-b1, LKAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.89 E-value=2.1e-05 Score=48.57 Aligned_cols=63 Identities=16% Similarity=0.202 Sum_probs=53.3
Q ss_pred HHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEeeccc
Q 022077 187 DYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGPATN 253 (303)
Q Consensus 187 ~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~~~~~ 253 (303)
.+.|.+.|+ ++|.|.++.+.... .+ .-.|-|...+..+|.-|+..||-..|++++|.|.++..
T Consensus 10 qq~L~~~f~-~h~~V~sv~l~~~~-dg--~~~A~V~v~~~q~A~~~v~~LhR~KiG~KRI~Vs~~~~ 72 (73)
T d2dgxa1 10 QQLLQEAFA-RHGKVKSVELSPHT-DY--QLKAVVQMENLQDAIGAVNSLHRYKIGSKKILVSLATG 72 (73)
T ss_dssp HHHHHHHHH-HHSCEEEEEECSCC-ST--TCCEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECCC
T ss_pred HHHHHHHHH-hheeEEEEEEEecc-CC--cEEEEEEcCCHHHHHHHHHHHHHHhcCCeEEEEEEecC
Confidence 455678887 89999999887663 23 33599999999999999999999999999999999863
No 174
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.87 E-value=2.4e-05 Score=50.89 Aligned_cols=72 Identities=18% Similarity=0.255 Sum_probs=55.8
Q ss_pred CCCCceEEEcCCCccc------C---HHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCce
Q 022077 170 DTPDHTIFVGDLAADV------T---DYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240 (303)
Q Consensus 170 ~~~~~~l~v~nl~~~~------~---~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~ 240 (303)
..+..++.|.-...+. . ..+|.+.|. .||+|.-+|++.+ ...|+|.+-++|.+|+. ++|.+
T Consensus 12 GPpDgTIvV~i~~~s~e~~~~FDe~l~~~Llq~l~-~~GeViLvRFv~d--------~mwVTF~dG~SAL~al~-l~g~~ 81 (95)
T d1ufwa_ 12 GPLDATVVVNLQSPTLEEKNEFPEDLRTELMQTLG-SYGTIVLVRINQG--------QMLVTFADSHSALSVLD-VDGMK 81 (95)
T ss_dssp CCTTCEEEEEESSCCHHHHHSCCHHHHHHHHHHHH-HHSCCSEEEEETT--------EEEEECSCSHHHHHHHH-GGGSE
T ss_pred CCCCcEEEEEeccCCccccccCCHHHHHHHHHHHh-hCCeEEEEEEeCC--------eEEEEECCcHHHHHHhc-cCCeE
Confidence 4555666664443222 2 246788887 9999999999866 38999999999999987 69999
Q ss_pred eCCeeeEEeec
Q 022077 241 CSTRPMRIGPA 251 (303)
Q Consensus 241 ~~g~~l~v~~~ 251 (303)
++|+.|+|...
T Consensus 82 v~G~~l~It~~ 92 (95)
T d1ufwa_ 82 VKGRAVKISGP 92 (95)
T ss_dssp ETTEEEEEECC
T ss_pred EcceEEEEecC
Confidence 99999999754
No 175
>d1uw4a_ d.58.7.4 (A:) RNA processing protein UPF3x, RRM domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.72 E-value=4.7e-05 Score=50.37 Aligned_cols=67 Identities=12% Similarity=0.212 Sum_probs=57.2
Q ss_pred ceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCc--eeEEEEEeCCHHHHHHHHHHhCCcee
Q 022077 174 HTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRT--KGYGFVRFGDESEQLRAMTEMNGVFC 241 (303)
Q Consensus 174 ~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~--~g~afV~f~~~~~A~~A~~~l~g~~~ 241 (303)
++|.|+.||..++++++.+.++ ..|.+........+.+.+. -.-|+|.|.+.++...-.+..+|+.+
T Consensus 2 tKvVvRrLPP~Lte~~F~~~l~-~~~~~d~~~f~~Gk~s~~~~~~SRAYi~F~~~~~v~~F~~~f~g~~F 70 (91)
T d1uw4a_ 2 SKVVIRRLPPTLTKEQLQEHLQ-PMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVF 70 (91)
T ss_dssp CEEEEEEECTTCCHHHHHHHHC-SCCCEEEEEEEESCCSSTTCCCEEEEEEESSSHHHHHHHHHHTTCEE
T ss_pred ceEEEecCCCCCCHHHHHHHhC-CcCceEEEEEeCCCcCCCCCcceEEEEEeCCHHHHHHHHHHcCCcEE
Confidence 5799999999999999999997 8899888877776544332 24699999999999999999999987
No 176
>d1uw4a_ d.58.7.4 (A:) RNA processing protein UPF3x, RRM domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.47 E-value=0.00026 Score=46.68 Aligned_cols=68 Identities=13% Similarity=0.110 Sum_probs=56.7
Q ss_pred ceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCC--cccEEEEEEccHHHHHHHHHHhCCCCCC
Q 022077 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQ--IEGYGFIEFISRAGAERVLQTFNGTPMP 149 (303)
Q Consensus 82 ~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~--~~g~afv~f~~~~~a~~a~~~l~g~~~~ 149 (303)
++|.|+.||+++|++++.+.++..|.+........+.+.+ .-.-|||.|.+.++.....+.++|..+.
T Consensus 2 tKvVvRrLPP~Lte~~F~~~l~~~~~~d~~~f~~Gk~s~~~~~~SRAYi~F~~~~~v~~F~~~f~g~~F~ 71 (91)
T d1uw4a_ 2 SKVVIRRLPPTLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFL 71 (91)
T ss_dssp CEEEEEEECTTCCHHHHHHHHCSCCCEEEEEEEESCCSSTTCCCEEEEEEESSSHHHHHHHHHHTTCEEE
T ss_pred ceEEEecCCCCCCHHHHHHHhCCcCceEEEEEeCCCcCCCCCcceEEEEEeCCHHHHHHHHHHcCCcEEE
Confidence 5789999999999999999999999887777666553322 2247999999999999999999998873
No 177
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.93 E-value=0.0007 Score=43.85 Aligned_cols=54 Identities=19% Similarity=0.289 Sum_probs=45.6
Q ss_pred HHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEeeec
Q 022077 96 TYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWA 160 (303)
Q Consensus 96 ~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~~~ 160 (303)
++|.+.|..||+|.-+++..+ -.+|+|.+-+.|.+|++ ++|..+ .++.+++...
T Consensus 39 ~~Llq~l~~~GeViLvRFv~d--------~mwVTF~dG~SAL~al~-l~g~~v--~G~~l~It~~ 92 (95)
T d1ufwa_ 39 TELMQTLGSYGTIVLVRINQG--------QMLVTFADSHSALSVLD-VDGMKV--KGRAVKISGP 92 (95)
T ss_dssp HHHHHHHHHHSCCSEEEEETT--------EEEEECSCSHHHHHHHH-GGGSEE--TTEEEEEECC
T ss_pred HHHHHHHhhCCeEEEEEEeCC--------eEEEEECCcHHHHHHhc-cCCeEE--cceEEEEecC
Confidence 356677899999998988876 48999999999999995 799999 7888887743
No 178
>d2dgxa1 d.58.7.1 (A:563-635) Limkain-b1, LKAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.81 E-value=0.003 Score=38.74 Aligned_cols=60 Identities=15% Similarity=0.266 Sum_probs=49.5
Q ss_pred HHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEeeecC
Q 022077 97 YLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWAS 161 (303)
Q Consensus 97 ~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~~~~ 161 (303)
.|.+.|.++|.|.++.+.... ...-.|-|...+..+|..|+..|+...+ +.+.|.|+++.
T Consensus 12 ~L~~~f~~h~~V~sv~l~~~~---dg~~~A~V~v~~~q~A~~~v~~LhR~Ki--G~KRI~Vs~~~ 71 (73)
T d2dgxa1 12 LLQEAFARHGKVKSVELSPHT---DYQLKAVVQMENLQDAIGAVNSLHRYKI--GSKKILVSLAT 71 (73)
T ss_dssp HHHHHHHHHSCEEEEEECSCC---STTCCEEEEESSHHHHHHHHHHHTTEEE--TTEEEEEEECC
T ss_pred HHHHHHHhheeEEEEEEEecc---CCcEEEEEEcCCHHHHHHHHHHHHHHhc--CCeEEEEEEec
Confidence 455678999999998886643 2334799999999999999999999999 88888888765
No 179
>d1whva_ d.58.7.1 (A:) Poly(A)-specific ribonuclease PARN {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.03 E-value=0.025 Score=37.04 Aligned_cols=58 Identities=10% Similarity=0.133 Sum_probs=46.7
Q ss_pred CCCceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhC
Q 022077 171 TPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237 (303)
Q Consensus 171 ~~~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~ 237 (303)
....-+|.-..|..+...||.++|+ .||.|. |.++.|. -|||...+.++|..++..+.
T Consensus 13 p~RdHVf~~tFP~~Wk~~dI~~lFS-pfG~V~-VswIddT-------Sa~V~L~~~e~~~~v~~~~~ 70 (100)
T d1whva_ 13 PKRDHVLHVTFPKEWKTSDLYQLFS-AFGNIQ-ISWIDDT-------SAFVSLSQPEQVQIAVNTSK 70 (100)
T ss_dssp CCCCSEEEEECCTTCCHHHHHHHHT-TTCSCC-CEEEETT-------EEEEECSCHHHHHHHHHHHH
T ss_pred CCcceeEEEeCCcccchhHHHHHhc-CCCceE-EEEecCc-------eEEEEecCHHHHHHHHHHhc
Confidence 3445577779999999999999999 999986 4444332 59999999999999987654
No 180
>d1whva_ d.58.7.1 (A:) Poly(A)-specific ribonuclease PARN {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.40 E-value=0.17 Score=32.91 Aligned_cols=55 Identities=11% Similarity=0.125 Sum_probs=46.1
Q ss_pred ceEEEcCCCccCCHHHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhC
Q 022077 82 RTLWIGDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFN 144 (303)
Q Consensus 82 ~~l~v~nLp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~ 144 (303)
..||.-..|......+|.++|+.||.|. |..+-+. -|||...+.++|..++..+.
T Consensus 16 dHVf~~tFP~~Wk~~dI~~lFSpfG~V~-VswIddT-------Sa~V~L~~~e~~~~v~~~~~ 70 (100)
T d1whva_ 16 DHVLHVTFPKEWKTSDLYQLFSAFGNIQ-ISWIDDT-------SAFVSLSQPEQVQIAVNTSK 70 (100)
T ss_dssp CSEEEEECCTTCCHHHHHHHHTTTCSCC-CEEEETT-------EEEEECSCHHHHHHHHHHHH
T ss_pred ceeEEEeCCcccchhHHHHHhcCCCceE-EEEecCc-------eEEEEecCHHHHHHHHHHhc
Confidence 4688889999999999999999999874 5555553 69999999999999887654
No 181
>d1xn9a_ d.12.1.3 (A:) Ribosomal protein S24e {Methanosarcina mazei [TaxId: 2209]}
Probab=71.36 E-value=6.2 Score=25.48 Aligned_cols=49 Identities=12% Similarity=0.134 Sum_probs=29.2
Q ss_pred cccCHHHHHHHHhhhCCCcceEEEEeeC----CCCCceeEEEEEeCCHHHHHHH
Q 022077 183 ADVTDYMLQETFRARYPSTKGAKVVIDR----LTGRTKGYGFVRFGDESEQLRA 232 (303)
Q Consensus 183 ~~~~~~~l~~~f~~~~G~i~~~~i~~~~----~~~~~~g~afV~f~~~~~A~~A 232 (303)
...+..+|++.+...||.-.++.|+.+- ..+++.|+|+| |++.+.|.+.
T Consensus 28 ~Tpsr~ei~~kla~~~~~~~~~vvv~~~~t~fG~~~stG~a~I-Yd~~e~~k~~ 80 (101)
T d1xn9a_ 28 STPSRNDVRNKLAAMLNAPLELLVIQRIKTEYGMQESKGYAKL-YEDADRMKQV 80 (101)
T ss_dssp SCCCHHHHHHHHHHHTTCCTTTEEEEEEEECSSSSEEEEEEEE-CSCHHHHHHH
T ss_pred CCCCHHHHHHHHHHhHCcCcCEEEEEcCcccCCCceEEEEEEE-ECCHHHHHhh
Confidence 4677888888887677765554444332 23345566655 6666665543
No 182
>d1vqos1 d.12.1.1 (S:1-81) Ribosomal protein L23 {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=68.61 E-value=2.9 Score=25.91 Aligned_cols=54 Identities=6% Similarity=0.086 Sum_probs=37.5
Q ss_pred EEEcCCCcccCHHHHHHHHhhhCCC-cceEEEEeeCCCCCceeEEEEEeCCHHHHHHH
Q 022077 176 IFVGDLAADVTDYMLQETFRARYPS-TKGAKVVIDRLTGRTKGYGFVRFGDESEQLRA 232 (303)
Q Consensus 176 l~v~nl~~~~~~~~l~~~f~~~~G~-i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A 232 (303)
-|+-.++...+..+|++.++..||. |..+..+.-. ++ +.-|||++....+|...
T Consensus 23 ~y~F~V~~~A~K~~IK~AVe~lf~VkV~~Vnt~~~~--~~-~KkA~V~L~~~~~a~di 77 (81)
T d1vqos1 23 KLQFAVDDRASKGEVADAVEEQYDVTVEQVNTQNTM--DG-EKKAVVRLSEDDDAQEV 77 (81)
T ss_dssp EEEEEECTTCCHHHHHHHHHHHHCCCEEEEEEEECT--TS-SEEEEEEECTTSCHHHH
T ss_pred EEEEEEcCcCCHHHHHHHHHHHcCCceeEEEEeEcC--CC-cEEEEEEeCCCCcHHHH
Confidence 3444678899999999999867765 5556655442 22 34699999877666554
No 183
>d1ywxa1 d.12.1.3 (A:1-102) Ribosomal protein S24e {Methanococcus maripaludis [TaxId: 39152]}
Probab=67.11 E-value=6.5 Score=25.44 Aligned_cols=48 Identities=19% Similarity=0.116 Sum_probs=27.3
Q ss_pred cccCHHHHHHHHhhhCCCcceEEEEeeC----CCCCceeEEEEEeCCHHHHHH
Q 022077 183 ADVTDYMLQETFRARYPSTKGAKVVIDR----LTGRTKGYGFVRFGDESEQLR 231 (303)
Q Consensus 183 ~~~~~~~l~~~f~~~~G~i~~~~i~~~~----~~~~~~g~afV~f~~~~~A~~ 231 (303)
...+..+|++.+...||.=.++.|+.+- ..+++.|||+| |+|.+.|.+
T Consensus 28 ~Tpsr~ei~~kla~~~~~~~~~vvv~~~~t~fG~~~stG~a~I-Yd~~e~~kk 79 (102)
T d1ywxa1 28 ATPSIKDVKMKLVAVLNANKQVLVVDTLDQIFGKLEAEGYAKI-YNDEKAMAT 79 (102)
T ss_dssp CCCCHHHHHHHHHHHHTSCSTTEEEEEEEECSSSSEEEEEEEE-CSCHHHHHH
T ss_pred CCCCHHHHHHHHHHHHCcCcCEEEEEcCEecCCCCeEEEEEEE-ECCHHHHHh
Confidence 4567777777776566654433333222 23455666655 677776654
No 184
>d1oj4a2 d.58.26.5 (A:164-283) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]}
Probab=59.15 E-value=9 Score=25.37 Aligned_cols=40 Identities=20% Similarity=0.320 Sum_probs=29.4
Q ss_pred HHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhC
Q 022077 188 YMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237 (303)
Q Consensus 188 ~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~ 237 (303)
.++++.+. .+|. +++ +|. ...+|..|++.++|.+|++.+.
T Consensus 60 ~~~~~~L~-~~g~---~~M-----SGS-GstvF~~f~~~~~a~~~~~~l~ 99 (120)
T d1oj4a2 60 DAVLSWLL-EYAP---SRL-----TGT-GACVFAEFDTESEARQVLEQAP 99 (120)
T ss_dssp HHHHHHHT-TTSC---EEE-----CTT-SSCEEEEESSHHHHHHHHHHSC
T ss_pred HHHHHHHh-hccc---cee-----cCC-CCEEEEEeCCHHHHHHHHHHcC
Confidence 45677776 7775 333 343 3368999999999999999875
No 185
>d2g1da1 d.12.1.3 (A:1-98) Ribosomal protein S24e {Thermoplasma acidophilum [TaxId: 2303]}
Probab=51.25 E-value=9.1 Score=24.49 Aligned_cols=48 Identities=13% Similarity=0.167 Sum_probs=27.9
Q ss_pred cccCHHHHHHHHhhhCCCcceEEEEeeCCC----CCceeEEEEEeCCHHHHHH
Q 022077 183 ADVTDYMLQETFRARYPSTKGAKVVIDRLT----GRTKGYGFVRFGDESEQLR 231 (303)
Q Consensus 183 ~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~----~~~~g~afV~f~~~~~A~~ 231 (303)
...+..+|++.+...||.-.+..|+.+-.| +.+.|+|+| |+|.+.|.+
T Consensus 29 ~Tpsr~ei~~kla~~~~~~~~~vvv~~~~t~fG~~~stG~a~I-Yd~~e~~kk 80 (98)
T d2g1da1 29 RTPSREEIKELIAKHEGVDKELVIVDNNKQLTGKHEIEGYTKI-YADKPSAML 80 (98)
T ss_dssp SCCCHHHHHHHHHHHHHSCSTTEECCCCCCCSSSSEEEEEEEE-ESHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHCCCcCEEEEEcCEecCCCceEEEEEEE-ECCHHHHHh
Confidence 466777888777756766555555544322 345566665 555555443
No 186
>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=45.55 E-value=25 Score=20.49 Aligned_cols=54 Identities=6% Similarity=0.129 Sum_probs=40.4
Q ss_pred eEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCC---HHHHHHHHHH
Q 022077 175 TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGD---ESEQLRAMTE 235 (303)
Q Consensus 175 ~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~---~~~A~~A~~~ 235 (303)
+|.|.++.-.-....|.+.++ ....|.++.+-.. .+.+.|+|+. .++..+++..
T Consensus 5 ~l~V~GM~C~~C~~~Ie~~l~-~~~gV~~v~V~~~------~~~~~v~~~~~~~~~~i~~~i~~ 61 (72)
T d2ggpb1 5 ILAVHGMTCSACTNTINTQLR-ALKGVTKCDISLV------TNECQVTYDNEVTADSIKEIIED 61 (72)
T ss_dssp EEECTTCCSSTTTHHHHHHHT-TSTTEEEEEECTT------TCEEEEEECSSCCHHHHHHHHHH
T ss_pred EEEECCcccHHHHHHHHHHHh-cCCCceEEEEECC------CCEEEEEECCCCCHHHHHHHHHH
Confidence 577888888888899999998 8888888887544 4468899864 4556666655
No 187
>d1oj4a2 d.58.26.5 (A:164-283) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]}
Probab=45.10 E-value=17 Score=23.88 Aligned_cols=40 Identities=20% Similarity=0.243 Sum_probs=28.0
Q ss_pred HHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCC
Q 022077 97 YLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNG 145 (303)
Q Consensus 97 ~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g 145 (303)
++++.+..+|. ..| || +...+|..|.+.++|.++.+.+..
T Consensus 61 ~~~~~L~~~g~---~~M-----SG-SGstvF~~f~~~~~a~~~~~~l~~ 100 (120)
T d1oj4a2 61 AVLSWLLEYAP---SRL-----TG-TGACVFAEFDTESEARQVLEQAPE 100 (120)
T ss_dssp HHHHHHTTTSC---EEE-----CT-TSSCEEEEESSHHHHHHHHHHSCG
T ss_pred HHHHHHhhccc---cee-----cC-CCCEEEEEeCCHHHHHHHHHHcCc
Confidence 45556677775 233 22 224799999999999999988753
No 188
>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.59 E-value=28 Score=20.72 Aligned_cols=57 Identities=12% Similarity=0.226 Sum_probs=44.8
Q ss_pred CceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeC----CHHHHHHHHHHh
Q 022077 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFG----DESEQLRAMTEM 236 (303)
Q Consensus 173 ~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~----~~~~A~~A~~~l 236 (303)
.-+|.|.++.-.-....|.+.|+ ..-.|.++.+-.. .+.+-|+|+ +.++..++++.+
T Consensus 9 ~~~l~V~gm~C~~C~~~ie~~l~-~~~gv~~v~v~~~------~~~v~v~~d~~~~~~~~i~~~i~~~ 69 (79)
T d1kvja_ 9 SVTISVEGMTCNSCVWTIEQQIG-KVNGVHHIKVSLE------EKNATIIYDPKLQTPKTLQEAIDDM 69 (79)
T ss_dssp EEEEEEESCCSTHHHHHHHHHHH-TTTTCSEEEEETT------TTEEEEEECTTTCCHHHHHHHHHHH
T ss_pred EEEEEECCeecHHHHHHHHHHHh-cCCCceEEEEECC------CCEEEEEECCCCCCHHHHHHHHHhc
Confidence 45789999999999999999998 8888888888554 345888985 566777777654
No 189
>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}
Probab=42.05 E-value=29 Score=20.15 Aligned_cols=57 Identities=11% Similarity=0.196 Sum_probs=44.1
Q ss_pred CceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCC----HHHHHHHHHHh
Q 022077 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGD----ESEQLRAMTEM 236 (303)
Q Consensus 173 ~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~----~~~A~~A~~~l 236 (303)
..+|.|.++.-......|.+.|. ..-.|.++.+-.. .+.+.|.|+. .++..++++.+
T Consensus 7 ~~~l~V~Gm~C~~C~~~Ie~~l~-~~~gV~~v~v~~~------~~~~~v~~d~~~~~~~~i~~~i~~~ 67 (72)
T d1p6ta1 7 EIAMQVSGMTCAACAARIEKGLK-RMPGVTDANVNLA------TETVNVIYDPAETGTAAIQEKIEKL 67 (72)
T ss_dssp EEEEEEESCCSSHHHHHHHHHHT-TSSSEEEEEEEGG------GTEEEEEECTTTSCHHHHHHHHHHH
T ss_pred EEEEEECCeecHHHHHHHHHHHH-cCCCcEEEEEEcC------CCEEEEEECCCCCCHHHHHHHHHHh
Confidence 34688999998888999999998 8888888888655 4468999953 56667777654
No 190
>d1ueka2 d.58.26.5 (A:149-268) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Thermus thermophilus [TaxId: 274]}
Probab=41.08 E-value=31 Score=22.31 Aligned_cols=44 Identities=11% Similarity=0.018 Sum_probs=31.8
Q ss_pred HHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCc
Q 022077 188 YMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGV 239 (303)
Q Consensus 188 ~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~ 239 (303)
+++++.+. .+|... +.+ +|. -..+|..|++.++|.+|.+.|...
T Consensus 66 ~~~~~~l~-~~g~~~-~~m-----SGS-Gst~F~l~~~~~~a~~~~~~l~~~ 109 (120)
T d1ueka2 66 KEVRGRMR-ALGLRG-VLM-----SGS-GSAFFGLAEGPDHARRAAEALRAW 109 (120)
T ss_dssp HHHHHHHH-HTTCEE-EEE-----CTT-SSCEEEECSSHHHHHHHHHHHTTT
T ss_pred HHHHHHHH-Hhhhhh-eee-----cCC-CCeEEEEeCCHHHHHHHHHHHHHh
Confidence 56777776 777643 333 332 335899999999999999998754
No 191
>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]}
Probab=39.79 E-value=31 Score=19.83 Aligned_cols=59 Identities=14% Similarity=0.156 Sum_probs=43.9
Q ss_pred ceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeC----CHHHHHHHHHHhCCce
Q 022077 174 HTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFG----DESEQLRAMTEMNGVF 240 (303)
Q Consensus 174 ~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~----~~~~A~~A~~~l~g~~ 240 (303)
.+|.|.++.-.-....|.+.++ .--.|.++.+-.. .+.+.|+|+ +.++..+++..+ |..
T Consensus 4 ~tl~V~Gm~C~~C~~~Ie~~l~-~~~GV~~v~v~~~------~~~v~v~~d~~~~~~~~i~~~i~~~-Gy~ 66 (69)
T d2qifa1 4 KTLQVEGMSCQHCVKAVETSVG-ELDGVSAVHVNLE------AGKVDVSFDADKVSVKDIADAIEDQ-GYD 66 (69)
T ss_dssp EEEEEECCCSHHHHHHHHHHHH-TSTTEEEEEEETT------TTEEEEEECTTTCCHHHHHHHHHHT-TCE
T ss_pred EEEEECCccCHHHHHHHHHHHh-cCCCceEEEEECC------CCEEEEEECCCCCCHHHHHHHHHHh-CCc
Confidence 4688889988888899999998 7788888887544 446889985 456666776653 443
No 192
>d1ueka2 d.58.26.5 (A:149-268) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Thermus thermophilus [TaxId: 274]}
Probab=34.11 E-value=37 Score=21.88 Aligned_cols=44 Identities=11% Similarity=-0.085 Sum_probs=30.5
Q ss_pred HHHHHHHhhcCCceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCC
Q 022077 96 TYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGT 146 (303)
Q Consensus 96 ~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~ 146 (303)
+++++.+..+|.. .+.+.- +...+|..|.+.++|+++.+.|...
T Consensus 66 ~~~~~~l~~~g~~-~~~mSG------SGst~F~l~~~~~~a~~~~~~l~~~ 109 (120)
T d1ueka2 66 KEVRGRMRALGLR-GVLMSG------SGSAFFGLAEGPDHARRAAEALRAW 109 (120)
T ss_dssp HHHHHHHHHTTCE-EEEECT------TSSCEEEECSSHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhhhh-heeecC------CCCeEEEEeCCHHHHHHHHHHHHHh
Confidence 4566667777753 233322 2247999999999999999988654
No 193
>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.46 E-value=41 Score=19.41 Aligned_cols=56 Identities=14% Similarity=0.277 Sum_probs=43.0
Q ss_pred ceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeC----CHHHHHHHHHHh
Q 022077 174 HTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFG----DESEQLRAMTEM 236 (303)
Q Consensus 174 ~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~----~~~~A~~A~~~l 236 (303)
.+|.|.++.-.-....|.+.+. .-..|.++.+... .+.+.|+|+ +.++..++++.+
T Consensus 5 ~~l~V~GM~C~~C~~~Ie~~l~-~~~GV~~v~v~~~------~~~v~v~~d~~~~~~~~i~~~i~~~ 64 (72)
T d2aw0a_ 5 TVINIDGMTCNSCVQSIEGVIS-KKPGVKSIRVSLA------NSNGTVEYDPLLTSPETLRGAIEDM 64 (72)
T ss_dssp EEEEEECCCSHHHHHHHHHHHH-TSTTCCCEEEETT------TTEEEEEECTTTCCHHHHHHHHHHH
T ss_pred EEEEECCcccHHHHHHHHHHHh-cCCCcEEEEEECC------CCEEEEEECCCCCCHHHHHHHHHhh
Confidence 4678889988888899999998 7888888888544 456889984 456666777654
No 194
>d1m1ha2 d.58.42.1 (A:5-50,A:132-186) N-utilization substance G protein NusG, N-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=31.87 E-value=56 Score=20.56 Aligned_cols=72 Identities=15% Similarity=0.110 Sum_probs=45.5
Q ss_pred HHHHHHHHhhcCC---ceEEEEEecCCCCCcccEEEEEEccHHHHHHHHHHhCCCCCCCCCceeEeeecCCCCCCCCCCC
Q 022077 95 ETYLNTCFAHTGE---VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT 171 (303)
Q Consensus 95 ~~~l~~~f~~~g~---i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~~~~~~i~v~~~~~~~~~~~~~~ 171 (303)
.+.|.+.....|- +..+.+.. ..-..||.||.+.-.+++...+....|..-
T Consensus 23 ~~~l~~~~~~~~l~~~i~~v~VP~---~klfPGYvfV~~~~~~~~~~~Ir~t~gV~~----------------------- 76 (101)
T d1m1ha2 23 KENLLKVLELEGLKDLVDEVIVPA---NKIFPGYILIKAHMNDKLLMAIEKTPHVFR----------------------- 76 (101)
T ss_dssp HHHHHHHHHHTTCGGGEEEEECSS---CSSSTTEEEEEECCCHHHHHHHHTSTTEEE-----------------------
T ss_pred HHHHHHHHHHcCchhhhHHHhccc---hhcCCCEEEEEEEeCchHHHHHhcCCCEEE-----------------------
Confidence 3455555554442 44443332 235779999999999998888876655321
Q ss_pred CCceEEEcCCCcccCHHHHHHHHh
Q 022077 172 PDHTIFVGDLAADVTDYMLQETFR 195 (303)
Q Consensus 172 ~~~~l~v~nl~~~~~~~~l~~~f~ 195 (303)
-|..++-|..++++++..+|+
T Consensus 77 ---fvg~~~~P~pl~~~Ev~~il~ 97 (101)
T d1m1ha2 77 ---PVMVGGKPVPLKEEEVQNILN 97 (101)
T ss_dssp ---ECEETTEECEECHHHHHHHHH
T ss_pred ---ecCCCCccCcCCHHHHHHHHH
Confidence 111234567789999998886
No 195
>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}
Probab=30.83 E-value=9.6 Score=18.91 Aligned_cols=12 Identities=25% Similarity=0.634 Sum_probs=9.6
Q ss_pred CHHHHHHHHhhhC
Q 022077 186 TDYMLQETFRARY 198 (303)
Q Consensus 186 ~~~~l~~~f~~~~ 198 (303)
++++|++.|+ .|
T Consensus 1 seeel~eAF~-~F 12 (33)
T d2hf5a1 1 SEEEIREAFR-VF 12 (33)
T ss_dssp CHHHHHHHHH-HH
T ss_pred CHHHHHHHHH-Hh
Confidence 5789999997 55
No 196
>d1clia2 d.139.1.1 (A:171-345) Aminoimidazole ribonucleotide synthetase (PurM) C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=29.44 E-value=14 Score=26.40 Aligned_cols=24 Identities=21% Similarity=0.187 Sum_probs=20.1
Q ss_pred eeEEEEEeCCHHHHHHHHHHhCCc
Q 022077 216 KGYGFVRFGDESEQLRAMTEMNGV 239 (303)
Q Consensus 216 ~g~afV~f~~~~~A~~A~~~l~g~ 239 (303)
.|.+||-+-+.++|+++++.+...
T Consensus 130 mGIGmvliV~~~~~~~v~~~l~~~ 153 (175)
T d1clia2 130 CGVGMIIALPAPEVDKALALLNAN 153 (175)
T ss_dssp TTEEEEEEECGGGHHHHHHHHHTT
T ss_pred CcceEEEEECHHHHHHHHHHHHHc
Confidence 678999999999999998887643
No 197
>d2c60a1 d.15.2.2 (A:43-122) Mitogen-activated protein kinase kinase kinase 3, MEKK 3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.80 E-value=61 Score=19.30 Aligned_cols=61 Identities=8% Similarity=0.077 Sum_probs=45.7
Q ss_pred CCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEe
Q 022077 180 DLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249 (303)
Q Consensus 180 nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~ 249 (303)
-++..+.-+||..-..+.||.-.++.+..+. -.|-..+.++-.+|++.|+ ...+-+.|++.
T Consensus 17 ~f~RPv~~~dl~~kv~~afGq~ldl~y~n~E--------l~IPl~~Q~DLDkAvellD-rs~~~ksLril 77 (80)
T d2c60a1 17 AFSRPVKYEDVEHKVTTVFGQPLDLHYMNNE--------LSILLKNQDDLDKAIDILD-RSSSMKSLRIL 77 (80)
T ss_dssp EECSSCCHHHHHHHHHHHHSSCCEEEEECSS--------CEEECCSHHHHHHHHHHHH-HCSSCCSEEEE
T ss_pred ecCCCccHHHHHHHHHHHhCCeeeeEEecCe--------EEEecccHHHHHHHHHHHc-cCcccceeEEE
Confidence 4567888899988888789999888776332 4589999999999999874 44444445554
No 198
>d2ia9a1 d.366.1.1 (A:1-92) Putative septation protein SpoVG {Bacillus subtilis [TaxId: 1423]}
Probab=25.74 E-value=42 Score=20.89 Aligned_cols=26 Identities=8% Similarity=0.169 Sum_probs=19.7
Q ss_pred CcceEEEEeeCCCCCceeEEEEEeCC
Q 022077 200 STKGAKVVIDRLTGRTKGYGFVRFGD 225 (303)
Q Consensus 200 ~i~~~~i~~~~~~~~~~g~afV~f~~ 225 (303)
+|++++|..-...|+-++||-|+|++
T Consensus 2 ~ITdVrI~~i~~~g~lkA~asvt~d~ 27 (92)
T d2ia9a1 2 EVTDVRLRRVNTDGRMRAIASITLDH 27 (92)
T ss_dssp CEEEEEEEECCSSSSEEEEEEEEETT
T ss_pred eeEEEEEEEecCCCCEEEEEEEEECC
Confidence 46677776655567889999999966
No 199
>d2f06a1 d.58.18.11 (A:71-141) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=25.70 E-value=59 Score=18.80 Aligned_cols=58 Identities=9% Similarity=0.002 Sum_probs=37.0
Q ss_pred EEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCce
Q 022077 176 IFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVF 240 (303)
Q Consensus 176 l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~ 240 (303)
+++.|-+..+. ++.+.|++.-=+|.++...... .++...+..++.+.|.++++. +|..
T Consensus 4 V~v~d~pG~L~--~v~~~L~~~~InI~~~y~~~~~----~~~~~vl~vdd~~~a~~~L~~-~G~~ 61 (71)
T d2f06a1 4 ISCPNVPGALA--KVLGFLSAEGVFIEYMYSFANN----NVANVVIRPSNMDKCIEVLKE-KKVD 61 (71)
T ss_dssp EEEESSTTHHH--HHHHHHHHTTCCEEEEEEEEET----TEEEEEEEESCHHHHHHHHHH-TTCE
T ss_pred EEecCCccHHH--HHHHHHHHCCCCEEEEEEEcCC----CcEEEEEEECCHHHHHHHHHH-CCCE
Confidence 44544444443 3677787444557777776552 255556667899999999876 6654
No 200
>d2i9xa1 d.366.1.1 (A:1-84) Putative septation protein SpoVG {Staphylococcus epidermidis [TaxId: 1282]}
Probab=25.57 E-value=44 Score=20.40 Aligned_cols=47 Identities=6% Similarity=0.101 Sum_probs=28.7
Q ss_pred CcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCcee--CCeeeEEeeccc
Q 022077 200 STKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFC--STRPMRIGPATN 253 (303)
Q Consensus 200 ~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~--~g~~l~v~~~~~ 253 (303)
+|++++|..-...|+-+++|-|+|++. -.+++..+ +...+.|.+-..
T Consensus 2 ~ITdVrI~~i~~~gklkA~asvt~d~~-------fvI~~ikvieg~~GlFVamPs~ 50 (84)
T d2i9xa1 2 KVTDVRLRKIQTDGRMKALVSITLDEA-------FVIHDLRVIEGNSGLFVAMPSK 50 (84)
T ss_dssp CEEEEEEEECCSSSSEEEEEEEEETTT-------EEEEEEEEEEETTEEEEECCEE
T ss_pred eeEEEEEEEecCCCCEEEEEEEEECCE-------EEEeeEEEEECCCCcEEECCCc
Confidence 467777765444678899999999763 12344332 334566665443
No 201
>d2nptb1 d.15.2.2 (B:42-123) Mitogen-activated protein kinase kinase kinase 2, MEKK 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.41 E-value=69 Score=19.14 Aligned_cols=61 Identities=7% Similarity=0.045 Sum_probs=46.1
Q ss_pred CCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhCCceeCCeeeEEe
Q 022077 180 DLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 249 (303)
Q Consensus 180 nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v~ 249 (303)
-++..+.-++|..-..+.||.-.++.+..+ .-.|-..+.++-.+|++.|+ ...+-+.|++.
T Consensus 17 ~f~RPv~~~dl~~kv~~afGq~ldl~y~n~--------EL~IPl~~Q~DLDkAvellD-rs~~~ksLril 77 (82)
T d2nptb1 17 QFPRPVKLEDLRSKAKIAFGQSMDLHYTNN--------ELVIPLTTQDDLDKAVELLD-RSIHMKSLKIL 77 (82)
T ss_dssp EECSSCCHHHHHHHHHHHHTSCEEEEEEET--------TEEEECCCHHHHHHHHHHHH-HCSSCCSEEEE
T ss_pred ecCCCccHHHHHHHHHHHhCCeeeEEEecC--------eEEEecccHHHHHHHHHHHc-cCccccceEEE
Confidence 457788889998888878999888877633 36789999999999999874 34444445554
No 202
>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]}
Probab=23.12 E-value=66 Score=18.43 Aligned_cols=55 Identities=13% Similarity=0.219 Sum_probs=40.9
Q ss_pred ceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCC----HHHHHHHHHH
Q 022077 174 HTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGD----ESEQLRAMTE 235 (303)
Q Consensus 174 ~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~----~~~A~~A~~~ 235 (303)
.+|.|.++.-.-....|.+.|. ..-.|.++.+-.. .+-+.|+|+. .++..++++.
T Consensus 5 ~~l~V~Gm~C~~C~~~Ie~~l~-~~~gV~~v~v~~~------~~~~~v~~~~~~~~~~~i~~~i~~ 63 (72)
T d1osda_ 5 VTLSVPGMTCSACPITVKKAIS-KVEGVSKVDVTFE------TRQAVVTFDDAKTSVQKLTKATAD 63 (72)
T ss_dssp EEEECTTCCSTTHHHHHHHHHH-TSTTEEEEEEETT------TTEEEEEEETTTCCHHHHHHHHHH
T ss_pred EEEEECCcccHHHHHHHHHHHH-cCCCcEEEEEEcC------CCEEEEEECCCCCCHHHHHHHHHh
Confidence 3577888888888899999998 8888888888544 3458888844 4556666665
No 203
>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=22.51 E-value=68 Score=18.41 Aligned_cols=57 Identities=9% Similarity=0.111 Sum_probs=41.5
Q ss_pred CceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCH--HHHHHHHHHh
Q 022077 173 DHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDE--SEQLRAMTEM 236 (303)
Q Consensus 173 ~~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~--~~A~~A~~~l 236 (303)
..++.|.++.-.-....|.+.|+ ..-.|.++.+-.. .+.+.|+|+.. ++..+++..+
T Consensus 4 k~~~~V~Gm~C~~C~~~Ie~~l~-~~~gV~~v~v~~~------~~~~~v~~~~~~~~~i~~~i~~~ 62 (73)
T d1mwza_ 4 RYSWKVSGMDCAACARKVENAVR-QLAGVNQVQVLFA------TEKLVVDADNDIRAQVESALQKA 62 (73)
T ss_dssp CEEEECTTCCSHHHHHHHHHHHH-TSSSEEEEEEETT------TTEEEEEESSCCHHHHHHHHHHH
T ss_pred EEEEEECCcCCHHHHHHHHHHHh-cCCCceEEEEECC------CCEEEEEECCCCHHHHHHHHHHc
Confidence 35678888888888899999998 7888888888544 34688888553 4455555553
No 204
>d2od6a1 d.58.4.22 (A:1-109) Hypothetical protein GOS_2359375 {environmental samples}
Probab=22.40 E-value=91 Score=19.81 Aligned_cols=49 Identities=4% Similarity=-0.145 Sum_probs=34.5
Q ss_pred HHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeCCHHHHHHHHHHhC
Q 022077 188 YMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMN 237 (303)
Q Consensus 188 ~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~ 237 (303)
+++.+.|. ..|-+.......-...|..+-....+|+|.++..+|...+.
T Consensus 32 ~~~~~~Lk-~~Gl~r~~~~~iwNk~~~fr~~~i~EYkd~~Afk~Cq~i~~ 80 (109)
T d2od6a1 32 PVWVKEMK-SRGLLKFSMNRVWNKGEVFRVVMTYEYKDRASFEANIAYLE 80 (109)
T ss_dssp HHHHHHHH-TTTEEEEEEEEECSSSSCEEEEEEEEESSHHHHHHHHHHHH
T ss_pred HHHHHHHH-HcCCceEEEEEEeCCCCcEEEEEEEEECCHHHHHHHHHHHH
Confidence 66777786 77877654322222356667778889999999998887653
No 205
>d1gcca_ d.10.1.2 (A:) GCC-box binding domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=22.22 E-value=66 Score=18.25 Aligned_cols=20 Identities=10% Similarity=0.004 Sum_probs=16.9
Q ss_pred eeEEEEEeCCHHHHHHHHHH
Q 022077 216 KGYGFVRFGDESEQLRAMTE 235 (303)
Q Consensus 216 ~g~afV~f~~~~~A~~A~~~ 235 (303)
+..-+=+|++.|+|.+|.+.
T Consensus 26 ~r~~LGtf~t~eeAArAYD~ 45 (63)
T d1gcca_ 26 ARVWLGTFETAEDAALAYDR 45 (63)
T ss_dssp EEEEEEEESSHHHHHHHHHH
T ss_pred cEeccccccCHHHHHHHHHH
Confidence 45678899999999999875
No 206
>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}
Probab=21.43 E-value=76 Score=18.53 Aligned_cols=55 Identities=9% Similarity=0.097 Sum_probs=41.4
Q ss_pred ceEEEcCCCcccCHHHHHHHHhhhCCCcceEEEEeeCCCCCceeEEEEEeC----CHHHHHHHHHH
Q 022077 174 HTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFG----DESEQLRAMTE 235 (303)
Q Consensus 174 ~~l~v~nl~~~~~~~~l~~~f~~~~G~i~~~~i~~~~~~~~~~g~afV~f~----~~~~A~~A~~~ 235 (303)
..+.|.++.-.-....|.+.|. .--.|.++.+-.. .+.+.|+|+ +.++..+++..
T Consensus 4 ~~~~V~Gm~C~~C~~~Ie~~l~-~~~gV~~v~v~~~------~~~~~v~~~~~~~~~~~i~~~i~~ 62 (79)
T d1p6ta2 4 AEFDIEGMTCAACANRIEKRLN-KIEGVANAPVNFA------LETVTVEYNPKEASVSDLKEAVDK 62 (79)
T ss_dssp EEEEESSCCSSSHHHHHHHHHT-TSSSEEECCEETT------TTEEEEEECTTTCCHHHHHHHHHH
T ss_pred EEEEECCcccHHHHHHHHHHHh-cCCCcEEEEEEeC------CCEEEEEECCCCCCHHHHHHHHHH
Confidence 3578889988888999999998 7778887777544 456889985 45666666654
No 207
>d1t15a2 c.15.1.3 (A:1758-1859) Breast cancer associated protein, BRCA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.74 E-value=51 Score=19.98 Aligned_cols=29 Identities=10% Similarity=-0.165 Sum_probs=23.3
Q ss_pred CcceEEEcCCCccCCHHHHHHHHhhcCCc
Q 022077 80 EIRTLWIGDLQYWMDETYLNTCFAHTGEV 108 (303)
Q Consensus 80 ~~~~l~v~nLp~~~t~~~l~~~f~~~g~i 108 (303)
++.++|+.+.-...+.++|+.+...+|..
T Consensus 5 ~g~~i~~~g~~~~~~~~~L~~li~~~GG~ 33 (102)
T d1t15a2 5 RGLEICCYGPFTNMPTDQLEWMVQLCGAS 33 (102)
T ss_dssp TTCEEEECSCCSSSCHHHHHHHHHHTTCE
T ss_pred CCcEEEEeCCCCCcCHHHHHHHHHHhCCE
Confidence 45788887755668889999999999974
No 208
>d1zhva2 d.58.18.8 (A:62-127) Hypothetical protein Atu0741 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=20.51 E-value=47 Score=19.18 Aligned_cols=26 Identities=15% Similarity=0.045 Sum_probs=21.4
Q ss_pred CceeEEEEEeCCHHHHHHHHHHhCCce
Q 022077 214 RTKGYGFVRFGDESEQLRAMTEMNGVF 240 (303)
Q Consensus 214 ~~~g~afV~f~~~~~A~~A~~~l~g~~ 240 (303)
....|.||..++.+.|.++++. .|++
T Consensus 39 y~~D~ilVp~~~~~~A~~~L~~-~g~~ 64 (66)
T d1zhva2 39 FDGDHLLVRSNDLEKTADLLAN-AGHS 64 (66)
T ss_dssp SSCEEEEEEGGGHHHHHHHHHH-TTCE
T ss_pred eeccEEEEEHHHHHHHHHHHHH-ccCE
Confidence 4477999999999999999986 5544
Done!