Query 022081
Match_columns 303
No_of_seqs 176 out of 330
Neff 6.1
Searched_HMMs 46136
Date Fri Mar 29 07:53:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022081.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022081hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4287 Pectin acetylesterase 100.0 4E-106 8E-111 755.9 16.0 299 1-301 104-402 (402)
2 PF03283 PAE: Pectinacetyleste 100.0 8.3E-87 1.8E-91 643.1 23.9 280 1-285 82-361 (361)
3 PF00326 Peptidase_S9: Prolyl 94.2 0.036 7.8E-07 48.8 2.8 59 57-121 46-104 (213)
4 PRK10566 esterase; Provisional 92.5 0.27 5.9E-06 43.9 5.7 53 59-115 91-143 (249)
5 PRK10115 protease 2; Provision 91.5 0.22 4.7E-06 52.7 4.5 35 56-90 505-539 (686)
6 COG1506 DAP2 Dipeptidyl aminop 91.5 0.19 4.1E-06 52.4 4.0 107 58-179 456-562 (620)
7 PF07859 Abhydrolase_3: alpha/ 91.0 0.39 8.5E-06 41.8 5.0 43 57-99 50-95 (211)
8 PF00135 COesterase: Carboxyle 90.6 0.32 6.9E-06 48.4 4.4 57 55-116 185-246 (535)
9 PRK13604 luxD acyl transferase 90.3 1.3 2.8E-05 42.6 8.1 52 54-115 90-141 (307)
10 PF01764 Lipase_3: Lipase (cla 90.2 0.98 2.1E-05 36.8 6.4 65 49-114 31-104 (140)
11 cd00312 Esterase_lipase Estera 87.2 0.85 1.8E-05 45.5 4.8 41 55-95 153-196 (493)
12 TIGR01840 esterase_phb esteras 86.9 0.87 1.9E-05 40.3 4.2 37 57-93 77-113 (212)
13 PF12695 Abhydrolase_5: Alpha/ 86.7 0.91 2E-05 36.5 3.9 40 54-94 41-80 (145)
14 PRK05077 frsA fermentation/res 86.6 3.9 8.4E-05 40.6 9.1 36 56-91 246-281 (414)
15 COG0657 Aes Esterase/lipase [L 85.2 1.8 4E-05 40.5 5.7 42 58-99 132-176 (312)
16 PLN02408 phospholipase A1 82.2 5.3 0.00011 39.4 7.6 52 75-132 200-251 (365)
17 PRK10162 acetyl esterase; Prov 82.0 2.1 4.6E-05 40.6 4.7 45 55-99 131-178 (318)
18 PRK11460 putative hydrolase; P 81.3 6.6 0.00014 35.5 7.5 31 61-91 89-119 (232)
19 cd00707 Pancreat_lipase_like P 81.0 4.1 8.8E-05 38.1 6.2 55 59-117 96-151 (275)
20 cd00519 Lipase_3 Lipase (class 80.7 6.2 0.00014 35.2 7.1 39 74-113 127-165 (229)
21 PF00756 Esterase: Putative es 79.0 2 4.4E-05 38.4 3.3 42 58-100 98-140 (251)
22 PRK10439 enterobactin/ferric e 78.4 2.8 6.1E-05 41.7 4.4 44 57-100 264-313 (411)
23 PLN02802 triacylglycerol lipas 78.1 8 0.00017 39.7 7.6 39 75-113 330-368 (509)
24 TIGR02821 fghA_ester_D S-formy 78.0 3.4 7.4E-05 38.1 4.6 23 73-95 136-158 (275)
25 cd00741 Lipase Lipase. Lipase 77.8 6 0.00013 33.0 5.7 56 57-113 9-67 (153)
26 COG1770 PtrB Protease II [Amin 77.5 2.3 5.1E-05 44.7 3.6 33 55-87 507-539 (682)
27 PF02230 Abhydrolase_2: Phosph 76.8 4.2 9.1E-05 36.0 4.7 35 58-93 89-123 (216)
28 PF10503 Esterase_phd: Esteras 76.6 3.4 7.4E-05 37.8 4.1 40 58-101 80-119 (220)
29 PF10340 DUF2424: Protein of u 75.9 6.1 0.00013 39.1 5.9 37 59-98 181-218 (374)
30 cd07224 Pat_like Patatin-like 75.9 3.1 6.8E-05 38.0 3.7 32 62-94 17-48 (233)
31 PF12242 Eno-Rase_NADH_b: NAD( 75.7 4.4 9.6E-05 31.3 3.8 48 56-108 20-69 (78)
32 KOG1515 Arylacetamide deacetyl 74.9 8.1 0.00018 37.6 6.4 69 51-120 142-211 (336)
33 cd07198 Patatin Patatin-like p 74.8 3.5 7.7E-05 35.4 3.6 31 61-94 15-45 (172)
34 TIGR03712 acc_sec_asp2 accesso 74.4 1.6 3.5E-05 44.5 1.4 47 49-96 327-378 (511)
35 PF03583 LIP: Secretory lipase 74.3 7.1 0.00015 36.9 5.7 64 54-118 43-115 (290)
36 PLN02454 triacylglycerol lipas 74.2 13 0.00028 37.4 7.7 64 63-133 216-282 (414)
37 PLN02442 S-formylglutathione h 71.1 5.1 0.00011 37.3 4.0 22 73-94 141-162 (283)
38 PF05728 UPF0227: Uncharacteri 70.4 9.5 0.00021 33.9 5.3 35 61-101 47-81 (187)
39 KOG1209 1-Acyl dihydroxyaceton 69.7 7.8 0.00017 36.1 4.6 66 71-136 4-76 (289)
40 cd07222 Pat_PNPLA4 Patatin-lik 69.2 5 0.00011 37.0 3.4 32 62-93 17-49 (246)
41 KOG4627 Kynurenine formamidase 68.9 5.7 0.00012 36.7 3.6 30 63-93 125-154 (270)
42 PF08840 BAAT_C: BAAT / Acyl-C 68.2 12 0.00026 33.5 5.6 55 58-116 5-59 (213)
43 PLN03037 lipase class 3 family 67.3 20 0.00043 37.0 7.5 41 73-113 316-356 (525)
44 cd07204 Pat_PNPLA_like Patatin 67.1 6.3 0.00014 36.3 3.6 32 62-93 17-49 (243)
45 PF07819 PGAP1: PGAP1-like pro 67.0 8 0.00017 35.2 4.2 34 58-91 65-101 (225)
46 PF00975 Thioesterase: Thioest 66.8 22 0.00049 31.0 7.0 52 58-112 51-102 (229)
47 PLN02298 hydrolase, alpha/beta 66.0 19 0.00041 33.7 6.7 35 58-92 117-151 (330)
48 cd07218 Pat_iPLA2 Calcium-inde 65.9 7 0.00015 36.2 3.6 31 62-93 18-48 (245)
49 TIGR03100 hydr1_PEP hydrolase, 65.1 9.7 0.00021 35.1 4.5 36 57-93 83-118 (274)
50 PF06028 DUF915: Alpha/beta hy 63.4 19 0.00041 33.7 6.0 61 53-117 83-145 (255)
51 PF12697 Abhydrolase_6: Alpha/ 63.1 26 0.00057 29.0 6.4 37 75-115 66-102 (228)
52 COG2272 PnbA Carboxylesterase 62.4 8.5 0.00019 39.3 3.8 37 54-90 156-195 (491)
53 PLN02310 triacylglycerol lipas 61.9 30 0.00065 34.7 7.4 40 74-114 208-247 (405)
54 cd07205 Pat_PNPLA6_PNPLA7_NTE1 61.4 22 0.00047 30.4 5.7 32 59-93 15-46 (175)
55 PF12740 Chlorophyllase2: Chlo 60.9 14 0.0003 34.8 4.7 39 57-96 65-112 (259)
56 TIGR03101 hydr2_PEP hydrolase, 60.6 15 0.00033 34.3 4.9 32 59-93 86-117 (266)
57 PF05448 AXE1: Acetyl xylan es 60.0 4.3 9.4E-05 39.0 1.2 118 48-180 147-274 (320)
58 KOG1552 Predicted alpha/beta h 60.0 13 0.00029 35.0 4.3 93 56-181 112-205 (258)
59 PLN00021 chlorophyllase 59.8 14 0.0003 35.4 4.6 39 59-97 102-148 (313)
60 PF01738 DLH: Dienelactone hyd 59.0 14 0.0003 32.5 4.2 36 57-92 80-115 (218)
61 PLN02324 triacylglycerol lipas 57.8 40 0.00087 33.9 7.5 36 63-99 203-239 (415)
62 KOG1516 Carboxylesterase and r 57.2 16 0.00034 37.1 4.7 35 58-92 175-212 (545)
63 KOG2237 Predicted serine prote 57.0 9.6 0.00021 40.3 3.1 34 55-88 529-562 (712)
64 PLN02211 methyl indole-3-aceta 56.7 31 0.00068 31.7 6.3 24 71-94 83-106 (273)
65 COG4814 Uncharacterized protei 56.7 12 0.00027 35.4 3.5 56 56-115 119-176 (288)
66 cd07207 Pat_ExoU_VipD_like Exo 56.2 14 0.00031 31.9 3.7 30 61-93 16-45 (194)
67 PF08237 PE-PPE: PE-PPE domain 55.9 37 0.00079 31.1 6.5 55 54-112 31-88 (225)
68 TIGR03695 menH_SHCHC 2-succiny 55.7 25 0.00054 29.6 5.1 22 74-95 69-90 (251)
69 PLN02965 Probable pheophorbida 55.3 29 0.00064 31.0 5.7 38 71-112 68-105 (255)
70 COG0412 Dienelactone hydrolase 54.9 18 0.0004 33.0 4.4 39 57-95 94-132 (236)
71 PRK10673 acyl-CoA esterase; Pr 54.9 29 0.00062 30.5 5.5 36 74-113 80-115 (255)
72 KOG4389 Acetylcholinesterase/B 54.7 32 0.00069 35.6 6.2 40 54-93 194-236 (601)
73 PRK10349 carboxylesterase BioH 54.3 32 0.0007 30.5 5.8 48 59-113 61-108 (256)
74 PF05677 DUF818: Chlamydia CHL 53.5 30 0.00065 34.1 5.7 54 58-114 197-254 (365)
75 TIGR03230 lipo_lipase lipoprot 53.1 33 0.00071 34.8 6.1 55 58-117 102-158 (442)
76 cd07220 Pat_PNPLA2 Patatin-lik 51.7 17 0.00036 33.8 3.6 31 62-92 22-53 (249)
77 TIGR03611 RutD pyrimidine util 51.0 25 0.00054 30.2 4.4 21 74-94 79-99 (257)
78 TIGR02240 PHA_depoly_arom poly 50.9 27 0.00058 31.6 4.8 21 74-94 90-110 (276)
79 COG3509 LpqC Poly(3-hydroxybut 50.6 16 0.00036 35.2 3.3 32 58-89 127-158 (312)
80 PRK04940 hypothetical protein; 49.5 34 0.00073 30.5 5.0 23 75-101 60-82 (180)
81 KOG4569 Predicted lipase [Lipi 49.5 52 0.0011 31.8 6.7 53 59-113 157-210 (336)
82 TIGR00976 /NonD putative hydro 49.1 23 0.00051 36.3 4.5 37 56-93 79-115 (550)
83 PLN02894 hydrolase, alpha/beta 49.0 50 0.0011 32.5 6.6 40 74-117 175-215 (402)
84 TIGR03056 bchO_mg_che_rel puta 48.7 43 0.00093 29.5 5.7 35 74-112 94-128 (278)
85 cd07230 Pat_TGL4-5_like Triacy 48.5 21 0.00046 35.8 3.9 29 62-93 91-119 (421)
86 PLN00413 triacylglycerol lipas 47.8 31 0.00066 35.4 4.9 35 62-98 273-307 (479)
87 PF03403 PAF-AH_p_II: Platelet 47.4 17 0.00036 35.9 3.0 17 74-90 227-243 (379)
88 TIGR01738 bioH putative pimelo 47.3 41 0.0009 28.3 5.2 51 58-115 51-101 (245)
89 cd07228 Pat_NTE_like_bacteria 47.1 28 0.0006 29.9 4.1 28 62-92 18-45 (175)
90 PLN02719 triacylglycerol lipas 47.1 40 0.00086 34.9 5.6 26 74-99 297-322 (518)
91 PLN02571 triacylglycerol lipas 47.0 41 0.00089 33.8 5.7 40 60-99 208-250 (413)
92 PF00091 Tubulin: Tubulin/FtsZ 47.0 81 0.0017 28.2 7.2 46 57-102 105-155 (216)
93 PLN02753 triacylglycerol lipas 46.9 38 0.00083 35.1 5.5 53 74-132 311-369 (531)
94 COG1752 RssA Predicted esteras 46.8 22 0.00048 33.6 3.7 30 62-94 29-58 (306)
95 cd07210 Pat_hypo_W_succinogene 46.7 25 0.00054 31.9 3.8 30 61-93 17-46 (221)
96 KOG3101 Esterase D [General fu 46.5 7.7 0.00017 36.0 0.4 36 56-91 117-157 (283)
97 PF01734 Patatin: Patatin-like 45.7 15 0.00032 30.3 2.1 17 77-93 29-45 (204)
98 PLN02733 phosphatidylcholine-s 45.7 34 0.00075 34.5 5.0 33 59-93 148-180 (440)
99 PF00450 Peptidase_S10: Serine 45.3 82 0.0018 30.2 7.4 91 16-111 76-176 (415)
100 PRK00870 haloalkane dehalogena 45.2 71 0.0015 29.3 6.7 37 74-114 114-150 (302)
101 TIGR03739 PRTRC_D PRTRC system 45.0 43 0.00092 31.9 5.3 34 72-111 272-305 (320)
102 PF05057 DUF676: Putative seri 44.9 18 0.0004 32.4 2.7 39 50-90 54-93 (217)
103 PF06500 DUF1100: Alpha/beta h 44.6 26 0.00056 35.2 3.8 35 56-90 242-276 (411)
104 PLN02847 triacylglycerol lipas 44.5 53 0.0012 34.7 6.2 35 75-110 251-287 (633)
105 PLN02824 hydrolase, alpha/beta 44.2 66 0.0014 29.3 6.3 34 75-112 102-135 (294)
106 cd01819 Patatin_and_cPLA2 Pata 43.0 33 0.00071 29.1 3.8 33 60-93 14-46 (155)
107 cd07209 Pat_hypo_Ecoli_Z1214_l 42.9 28 0.00061 31.2 3.5 28 62-92 16-43 (215)
108 PF03575 Peptidase_S51: Peptid 42.6 25 0.00055 29.7 3.0 10 77-86 70-79 (154)
109 TIGR02427 protocat_pcaD 3-oxoa 41.8 39 0.00084 28.6 4.1 21 74-94 78-98 (251)
110 cd07225 Pat_PNPLA6_PNPLA7 Pata 41.6 29 0.00063 33.2 3.6 31 61-94 32-62 (306)
111 cd07213 Pat17_PNPLA8_PNPLA9_li 40.7 42 0.0009 31.5 4.5 38 54-92 13-51 (288)
112 PF12715 Abhydrolase_7: Abhydr 40.5 34 0.00073 34.2 3.9 58 51-115 200-259 (390)
113 cd07208 Pat_hypo_Ecoli_yjju_li 40.1 32 0.0007 31.5 3.6 30 61-92 15-44 (266)
114 PRK10279 hypothetical protein; 39.6 33 0.00071 32.8 3.6 29 62-93 23-51 (300)
115 PLN02162 triacylglycerol lipas 39.1 54 0.0012 33.6 5.2 25 75-99 278-302 (475)
116 cd07206 Pat_TGL3-4-5_SDP1 Tria 39.1 38 0.00083 32.5 3.9 30 62-94 87-116 (298)
117 CHL00024 psbI photosystem II p 38.5 18 0.00039 23.9 1.1 13 8-20 21-33 (36)
118 PRK02655 psbI photosystem II r 38.2 18 0.00039 24.0 1.1 13 8-20 21-33 (38)
119 cd07231 Pat_SDP1-like Sugar-De 37.8 41 0.00089 32.7 3.9 30 62-94 86-115 (323)
120 PF09752 DUF2048: Uncharacteri 37.2 68 0.0015 31.6 5.4 50 60-116 163-216 (348)
121 PF01083 Cutinase: Cutinase; 36.9 1.3E+02 0.0028 26.2 6.8 40 54-95 62-101 (179)
122 TIGR03343 biphenyl_bphD 2-hydr 36.7 48 0.001 29.6 4.1 23 73-95 99-121 (282)
123 KOG2564 Predicted acetyltransf 36.3 51 0.0011 31.9 4.2 37 61-102 135-171 (343)
124 PLN02934 triacylglycerol lipas 36.0 69 0.0015 33.2 5.4 40 58-99 306-345 (515)
125 PF00151 Lipase: Lipase; Inte 35.9 65 0.0014 31.2 5.1 54 62-119 137-193 (331)
126 COG2382 Fes Enterochelin ester 35.6 55 0.0012 31.5 4.4 66 51-121 147-218 (299)
127 TIGR01836 PHA_synth_III_C poly 35.1 43 0.00093 31.9 3.7 33 59-93 122-154 (350)
128 PF00561 Abhydrolase_1: alpha/ 35.0 81 0.0018 26.6 5.1 35 58-95 29-64 (230)
129 PF04260 DUF436: Protein of un 34.2 40 0.00087 29.8 2.9 26 59-84 3-28 (172)
130 PF11288 DUF3089: Protein of u 33.8 57 0.0012 29.7 4.0 67 21-88 42-108 (207)
131 KOG2183 Prolylcarboxypeptidase 33.8 58 0.0013 33.0 4.3 48 50-101 135-189 (492)
132 PLN02761 lipase class 3 family 33.3 92 0.002 32.3 5.8 25 75-99 294-318 (527)
133 TIGR01392 homoserO_Ac_trn homo 33.2 1.1E+02 0.0024 28.9 6.2 38 75-116 126-164 (351)
134 cd07227 Pat_Fungal_NTE1 Fungal 33.2 49 0.0011 31.1 3.6 30 62-94 28-57 (269)
135 COG0031 CysK Cysteine synthase 32.8 80 0.0017 30.4 5.0 57 50-114 238-295 (300)
136 PRK10749 lysophospholipase L2; 32.7 75 0.0016 29.9 4.9 21 74-94 130-150 (330)
137 cd07219 Pat_PNPLA1 Patatin-lik 32.2 53 0.0011 32.7 3.8 16 78-93 47-62 (382)
138 KOG4391 Predicted alpha/beta h 32.1 17 0.00036 34.0 0.2 42 58-99 132-173 (300)
139 cd07232 Pat_PLPL Patain-like p 31.7 52 0.0011 32.9 3.7 31 61-94 84-114 (407)
140 PRK11126 2-succinyl-6-hydroxy- 31.7 67 0.0014 27.9 4.1 21 74-94 65-85 (242)
141 COG4099 Predicted peptidase [G 31.4 56 0.0012 31.9 3.7 43 58-100 252-294 (387)
142 PLN02872 triacylglycerol lipas 31.3 72 0.0016 31.6 4.6 34 54-90 142-175 (395)
143 cd07221 Pat_PNPLA3 Patatin-lik 31.3 53 0.0011 30.5 3.5 32 62-93 18-50 (252)
144 PF02532 PsbI: Photosystem II 31.0 22 0.00047 23.5 0.6 13 8-20 21-33 (36)
145 PF02450 LCAT: Lecithin:choles 31.0 64 0.0014 31.7 4.2 37 58-97 105-141 (389)
146 PRK10985 putative hydrolase; P 30.8 67 0.0014 30.2 4.1 33 57-91 115-147 (324)
147 PLN02578 hydrolase 30.7 1.4E+02 0.0031 28.4 6.5 26 74-99 151-176 (354)
148 PRK11071 esterase YqiA; Provis 30.6 85 0.0018 27.4 4.5 34 58-93 46-79 (190)
149 PRK13917 plasmid segregation p 30.6 1.3E+02 0.0029 29.0 6.3 26 71-101 289-314 (344)
150 PRK03592 haloalkane dehalogena 30.4 1.6E+02 0.0034 26.8 6.5 34 75-112 93-126 (295)
151 cd07229 Pat_TGL3_like Triacylg 30.1 61 0.0013 32.4 3.8 36 62-100 101-140 (391)
152 PF06821 Ser_hydrolase: Serine 29.9 1.4E+02 0.003 25.9 5.7 20 75-94 55-74 (171)
153 COG4188 Predicted dienelactone 29.5 57 0.0012 32.3 3.5 34 58-91 135-175 (365)
154 COG2945 Predicted hydrolase of 29.3 67 0.0014 29.3 3.6 36 56-92 85-120 (210)
155 PLN02385 hydrolase; alpha/beta 28.9 97 0.0021 29.3 4.9 18 75-92 162-179 (349)
156 COG0627 Predicted esterase [Ge 28.8 55 0.0012 31.6 3.2 35 76-115 153-187 (316)
157 cd07212 Pat_PNPLA9 Patatin-lik 28.5 78 0.0017 30.3 4.2 43 58-100 13-62 (312)
158 COG1505 Serine proteases of th 28.3 26 0.00056 36.9 0.9 35 53-87 478-512 (648)
159 COG4947 Uncharacterized protei 28.2 35 0.00075 30.8 1.6 35 76-115 102-136 (227)
160 COG1075 LipA Predicted acetylt 27.9 1.2E+02 0.0027 29.1 5.5 44 51-101 106-149 (336)
161 TIGR01250 pro_imino_pep_2 prol 27.5 72 0.0016 27.7 3.5 21 74-94 95-115 (288)
162 PF11187 DUF2974: Protein of u 27.4 1.7E+02 0.0037 26.7 6.0 25 76-100 85-109 (224)
163 PF10230 DUF2305: Uncharacteri 27.1 63 0.0014 30.0 3.2 15 73-87 82-96 (266)
164 PHA02857 monoglyceride lipase; 27.1 1.1E+02 0.0024 27.4 4.8 20 74-93 96-115 (276)
165 PRK03204 haloalkane dehalogena 27.0 1.2E+02 0.0027 27.7 5.2 34 58-93 86-119 (286)
166 PRK13690 hypothetical protein; 27.0 81 0.0017 28.2 3.6 28 57-84 8-35 (184)
167 TIGR01440 conserved hypothetic 26.6 69 0.0015 28.4 3.1 26 59-84 3-28 (172)
168 PF08538 DUF1749: Protein of u 25.6 1E+02 0.0022 29.8 4.4 67 23-98 63-131 (303)
169 smart00824 PKS_TE Thioesterase 25.4 3E+02 0.0064 22.7 6.9 38 74-112 63-100 (212)
170 PF07224 Chlorophyllase: Chlor 25.2 66 0.0014 30.8 2.9 36 58-94 95-139 (307)
171 PF10081 Abhydrolase_9: Alpha/ 24.5 98 0.0021 29.7 3.9 45 55-101 89-135 (289)
172 PF13241 NAD_binding_7: Putati 24.4 1.8E+02 0.0039 22.7 5.0 34 74-113 7-40 (103)
173 PLN02511 hydrolase 24.3 1E+02 0.0022 30.1 4.2 36 56-93 156-191 (388)
174 KOG2882 p-Nitrophenyl phosphat 24.2 2.5E+02 0.0054 27.2 6.6 80 27-114 24-117 (306)
175 KOG3724 Negative regulator of 24.1 1E+02 0.0022 33.8 4.4 19 71-89 178-196 (973)
176 PRK11761 cysM cysteine synthas 24.1 91 0.002 29.4 3.7 37 75-114 250-286 (296)
177 KOG4409 Predicted hydrolase/ac 24.1 1.8E+02 0.0038 28.9 5.7 54 59-119 147-200 (365)
178 KOG1553 Predicted alpha/beta h 23.8 1.7E+02 0.0037 29.3 5.5 78 50-136 286-364 (517)
179 COG2267 PldB Lysophospholipase 23.8 1.5E+02 0.0033 28.0 5.2 41 73-119 105-145 (298)
180 PRK08775 homoserine O-acetyltr 23.6 1.7E+02 0.0037 27.6 5.5 34 76-113 139-172 (343)
181 COG2939 Carboxypeptidase C (ca 23.6 4.2E+02 0.0091 27.4 8.5 93 13-113 134-240 (498)
182 smart00704 ZnF_CDGSH CDGSH-typ 23.4 32 0.0007 22.8 0.4 6 30-35 26-31 (38)
183 PF11144 DUF2920: Protein of u 23.4 1.2E+02 0.0025 30.6 4.4 53 57-116 165-220 (403)
184 PLN02652 hydrolase; alpha/beta 23.1 1.3E+02 0.0028 29.7 4.7 34 58-93 193-226 (395)
185 cd07386 MPP_DNA_pol_II_small_a 22.6 2.9E+02 0.0062 24.9 6.6 32 55-86 15-48 (243)
186 COG0431 Predicted flavoprotein 22.3 85 0.0018 27.5 3.0 52 49-101 75-127 (184)
187 PF05577 Peptidase_S28: Serine 22.3 1.9E+02 0.0042 28.4 5.8 60 57-121 87-154 (434)
188 PF02129 Peptidase_S15: X-Pro 22.2 1.1E+02 0.0024 28.0 3.8 37 57-94 84-120 (272)
189 PRK04123 ribulokinase; Provisi 21.9 1.9E+02 0.0041 29.6 5.8 71 26-105 379-468 (548)
190 PF13173 AAA_14: AAA domain 21.9 1E+02 0.0023 24.7 3.3 28 58-87 75-102 (128)
191 PRK06489 hypothetical protein; 21.8 2.1E+02 0.0046 27.2 5.8 19 75-93 153-172 (360)
192 PRK00175 metX homoserine O-ace 21.7 2.1E+02 0.0045 27.6 5.8 36 75-114 146-182 (379)
193 PRK07581 hypothetical protein; 21.5 1.7E+02 0.0036 27.4 5.0 26 75-100 123-149 (339)
194 KOG2100 Dipeptidyl aminopeptid 21.1 84 0.0018 34.0 3.1 28 63-90 596-623 (755)
195 PRK05579 bifunctional phosphop 21.1 2.8E+02 0.006 27.7 6.6 77 23-110 144-235 (399)
196 KOG2547 Ceramide glucosyltrans 21.0 97 0.0021 31.0 3.3 52 60-118 129-185 (431)
197 COG0596 MhpC Predicted hydrola 20.9 1.7E+02 0.0036 24.0 4.4 22 77-98 90-111 (282)
198 cd07390 MPP_AQ1575 Aquifex aeo 20.8 93 0.002 26.5 2.9 53 31-85 2-54 (168)
199 PLN02209 serine carboxypeptida 20.3 3.6E+02 0.0078 27.2 7.3 96 16-117 108-213 (437)
200 PLN02679 hydrolase, alpha/beta 20.3 1.7E+02 0.0037 28.0 4.8 17 75-91 155-171 (360)
201 PF10686 DUF2493: Protein of u 20.3 1.4E+02 0.0031 22.2 3.4 33 58-100 19-52 (71)
202 cd07387 MPP_PolD2_C PolD2 (DNA 20.3 2.9E+02 0.0063 25.9 6.2 32 57-88 18-57 (257)
203 PRK09291 short chain dehydroge 20.2 1.2E+02 0.0027 26.6 3.7 15 76-91 4-18 (257)
204 PLN03087 BODYGUARD 1 domain co 20.2 2.9E+02 0.0063 28.2 6.7 39 74-116 273-311 (481)
205 cd03146 GAT1_Peptidase_E Type 20.1 93 0.002 27.8 2.8 13 23-35 31-43 (212)
206 PRK05855 short chain dehydroge 20.1 1.2E+02 0.0027 30.2 4.0 18 165-182 230-247 (582)
207 TIGR01138 cysM cysteine syntha 20.1 1.2E+02 0.0025 28.5 3.6 49 58-114 234-282 (290)
No 1
>KOG4287 consensus Pectin acetylesterase and similar proteins [Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=3.8e-106 Score=755.86 Aligned_cols=299 Identities=57% Similarity=1.118 Sum_probs=292.5
Q ss_pred CCcccccccccCCCCCCCCCCcCceEEEEecCCCcccCCCCCcccCCCceEEEehHHHHHHHHHHHHHcCCCCcCeEEEe
Q 022081 1 MERQVSFSGILSSDPSQNPDFFSWNKVKIRYCDGASFAGRPESEFKNGTNLFFRGQLIWEALMDELLSVGMSNAKQAFLT 80 (303)
Q Consensus 1 m~~~~~~~Gils~~~~~NP~f~nwn~V~vpYC~Gd~~~G~~~~~~~~~~~l~frG~~i~~avl~~L~~~g~~~a~~v~ls 80 (303)
|||++.|.||||+++++||||||||+|+||||||++|+|+.+.. +++.++|||++||+|||++|+++||.+|+++||+
T Consensus 104 mek~~~FtGILS~k~~eNPdF~NWNrVkvRYCDGasFsGd~e~~--~~t~l~fRG~rIw~av~~eLl~kGms~Ak~alLs 181 (402)
T KOG4287|consen 104 MEKELAFTGILSNKPSENPDFYNWNRVKVRYCDGASFSGDSENK--NATQLQFRGARIWLAVMDELLAKGMSNAKQALLS 181 (402)
T ss_pred chhhcceeEEecCCcccCCcccccceeEEeecCCCcccCccccc--chhhhhhhHHHHHHHHHHHHHHhhhhHHHHHHhh
Confidence 89999999999999999999999999999999999999988765 2349999999999999999999999999999999
Q ss_pred ecChhHHHHHHhHHHHHHhCCCCcEEEEeecCccccCCCCCccchhhHHHhhhhhhhccccccCCcchhcccCCCccCCc
Q 022081 81 GCSAGGLAAVIHCDDFRERLPQHATVKCLADASFFLDESDVQGNRTMRSFYDDVFHLQGVAKSLDRNCLSRMGNSRCLFP 160 (303)
Q Consensus 81 G~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~fld~~~~~g~~~~~~~~~~~~~~~~~~~~lp~~C~~~~~~~~C~f~ 160 (303)
||||||+|++||+|++|++||+.++|+|++|||||||..|++|.+.++.+|.+++++|++.++||+.|++.++||+||||
T Consensus 182 GcSAGGLa~iLhCD~Fr~~lp~~t~VKClSDaG~FLd~~dv~g~~t~~~~~~~vv~lqg~~k~Lp~~Ct~~~~p~~CfFp 261 (402)
T KOG4287|consen 182 GCSAGGLASILHCDEFRELLPPTTKVKCLSDAGFFLDAKDVSGGPTLRSYYAGVVTLQGLQKNLPQSCTSHLEPSLCFFP 261 (402)
T ss_pred cCCccchhheeehHHHHhhCCCCceeEEecccceeeecccccCCcchhhhhhhheeeecccccCCHHHHhcCCchhhcch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHhhcCCCCeeeeccchhHHHHhhhcCCCCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceEEe
Q 022081 161 REFIKNIRTPVFIVNPAYDFWQIRNILVPDVSDPQGYWQTCRLNIHSCNPNQLEILKGFRNSLLNALSEFQQKNEAGMFV 240 (303)
Q Consensus 161 ~~~~~~i~tP~Filns~YD~wQl~nil~~~~~~p~~~w~~C~~~~~~C~~~q~~~lq~~~~~~~~~l~~~~~~~~~G~F~ 240 (303)
|++++.|+||+||+|++||+|||++.++|+++|+.|.|..|++|+..|++.||+++|+||.+|+.+++.+.++...|+||
T Consensus 262 q~v~~~irtP~F~vN~afD~wQi~~~laP~s~d~~g~w~~ckl~~~~c~~~q~~~~qgFr~~ml~a~~~f~~~~~~g~fi 341 (402)
T KOG4287|consen 262 QYVLKTIRTPVFLVNAAFDSWQIQNSLAPTSADPSGSWKYCKLNHRECTAAQIDFLQGFRPQMLDAVKIFSSSKQNGLFI 341 (402)
T ss_pred HHHHhhcCCceEehhhhhhHHhccCCCCCCCCCcccchhhcccccccCCHHHHHHHHHHHHHHHHHhhhheecccCCeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998889999999
Q ss_pred cCCccchhccccccccCCCccccCCccHHHHhhcccccCccceecCCCCCCCCCCCCCCCC
Q 022081 241 NSCYIHCQTWMAETWHSPSSPRINSKTIAESVGDWYFNRGAVKLIDCPYPCNPTCYNMDFT 301 (303)
Q Consensus 241 ~SC~~Hc~~~~~~~W~~~~~p~v~g~ti~~A~~~W~~~r~~~~~iDc~yPcNptC~~~~~~ 301 (303)
+||++|||.+.++||+++++|++++++||+||+||||+|..+|+|||||||||||+|++++
T Consensus 342 nsc~aHCq~~~~~tW~~~~sp~i~~k~iA~aVgdWyf~R~~vklIDCPyPCn~tC~nl~~~ 402 (402)
T KOG4287|consen 342 NSCFAHCQTERQDTWFADDSPAIKNKTIAEAVGDWYFDRAKVKLIDCPYPCNPTCHNLSFE 402 (402)
T ss_pred chHHHhhcccccccccCCCCccccCchhhhhhcceecccceeeeccCCCCCCCCCccccCC
Confidence 9999999999999999999999999999999999999998899999999999999999874
No 2
>PF03283 PAE: Pectinacetylesterase
Probab=100.00 E-value=8.3e-87 Score=643.14 Aligned_cols=280 Identities=51% Similarity=0.980 Sum_probs=269.4
Q ss_pred CCcccccccccCCCCCCCCCCcCceEEEEecCCCcccCCCCCcccCCCceEEEehHHHHHHHHHHHHHcCCCCcCeEEEe
Q 022081 1 MERQVSFSGILSSDPSQNPDFFSWNKVKIRYCDGASFAGRPESEFKNGTNLFFRGQLIWEALMDELLSVGMSNAKQAFLT 80 (303)
Q Consensus 1 m~~~~~~~Gils~~~~~NP~f~nwn~V~vpYC~Gd~~~G~~~~~~~~~~~l~frG~~i~~avl~~L~~~g~~~a~~v~ls 80 (303)
|.+++.+.||||+++++||+|+|||+|||||||||+|+|++++..+.+.++||||++|++|||++|+++||++|++|||+
T Consensus 82 ~~~~~~~~Gils~~~~~Np~f~~wN~V~vpYC~Gd~~~G~~~~~~~~~~~l~frG~~i~~avl~~l~~~gl~~a~~vllt 161 (361)
T PF03283_consen 82 WPKTFAFSGILSNDPAENPDFYNWNHVFVPYCDGDSHSGDVEPVDYGGTTLYFRGYRILRAVLDDLLSNGLPNAKQVLLT 161 (361)
T ss_pred hhhhccccccccCCcccCCccccccEEEEEecCCccccCcccccccCCceeEeecHHHHHHHHHHHHHhcCcccceEEEe
Confidence 45678899999999999999999999999999999999988766567889999999999999999999999999999999
Q ss_pred ecChhHHHHHHhHHHHHHhCCCCcEEEEeecCccccCCCCCccchhhHHHhhhhhhhccccccCCcchhcccCCCccCCc
Q 022081 81 GCSAGGLAAVIHCDDFRERLPQHATVKCLADASFFLDESDVQGNRTMRSFYDDVFHLQGVAKSLDRNCLSRMGNSRCLFP 160 (303)
Q Consensus 81 G~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~fld~~~~~g~~~~~~~~~~~~~~~~~~~~lp~~C~~~~~~~~C~f~ 160 (303)
||||||+||++|+|+||++||+.++|++++|||||||.++++|...++.++..++.+++..+.+|++|.+.+++. ||||
T Consensus 162 G~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~f~d~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~C~~~~~~~-C~f~ 240 (361)
T PF03283_consen 162 GCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGFFLDNPDYSGNPCIRSFYSDVVGLQNWSKSLPESCVAQYDPE-CFFP 240 (361)
T ss_pred ccChHHHHHHHHHHHHHHHhccCceEEEeccccccccccCcccchhHHHHHHHHHHHHHhhccCCHhHHhccCcc-ccch
Confidence 999999999999999999999899999999999999999999999999999999999999999999999988766 9999
Q ss_pred hHHhhcCCCCeeeeccchhHHHHhhhcCCCCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceEEe
Q 022081 161 REFIKNIRTPVFIVNPAYDFWQIRNILVPDVSDPQGYWQTCRLNIHSCNPNQLEILKGFRNSLLNALSEFQQKNEAGMFV 240 (303)
Q Consensus 161 ~~~~~~i~tP~Filns~YD~wQl~nil~~~~~~p~~~w~~C~~~~~~C~~~q~~~lq~~~~~~~~~l~~~~~~~~~G~F~ 240 (303)
|+++|+|+||+||+||+||+|||+++|+|.. +.|..|+.++..|+++|+++||+||++|+++|+.+.+++++|+|+
T Consensus 241 q~~~~~I~tPlFivns~YD~wQl~~il~p~~----~~w~~c~~~~~~Cs~~Ql~~lq~fr~~~~~aL~~~~~~~~~G~Fi 316 (361)
T PF03283_consen 241 QYLYPYIKTPLFIVNSLYDSWQLQNILVPPS----GSWISCKNDLPPCSPSQLDYLQGFRSEMLDALKNVSNSPNWGVFI 316 (361)
T ss_pred HHHHhhcCcceeeehhhhCHHHhhcccCCCc----ccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEC
Confidence 9999999999999999999999999999864 899999999999999999999999999999999999999999999
Q ss_pred cCCccchhccccccccCCCccccCCccHHHHhhcccccCccceec
Q 022081 241 NSCYIHCQTWMAETWHSPSSPRINSKTIAESVGDWYFNRGAVKLI 285 (303)
Q Consensus 241 ~SC~~Hc~~~~~~~W~~~~~p~v~g~ti~~A~~~W~~~r~~~~~i 285 (303)
+||++|||++.+++|+.+++|+|+|+||++||+||||+|+.+|+|
T Consensus 317 ~SC~~Hcq~~~~~~W~~~~~p~v~g~tia~Av~dW~~~r~~~~~~ 361 (361)
T PF03283_consen 317 PSCFAHCQSESSDTWNSPDSPRVNGKTIAEAVGDWYFSRSEVKKI 361 (361)
T ss_pred ccchhhcccccCCcccCCCcccCCCEEHHHHHHHHHhcccccccC
Confidence 999999999999999998899999999999999999999988876
No 3
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=94.21 E-value=0.036 Score=48.83 Aligned_cols=59 Identities=19% Similarity=0.147 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHcCCCCcCeEEEeecChhHHHHHHhHHHHHHhCCCCcEEEEeecCccccCCCCC
Q 022081 57 LIWEALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHCDDFRERLPQHATVKCLADASFFLDESDV 121 (303)
Q Consensus 57 ~i~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~fld~~~~ 121 (303)
.-+.+++++|.+++.-++++|.+.|.|+||+.|++-.- ..|...+ .+++.+|+ .|....
T Consensus 46 ~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~----~~~~~f~-a~v~~~g~-~d~~~~ 104 (213)
T PF00326_consen 46 DDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAAT----QHPDRFK-AAVAGAGV-SDLFSY 104 (213)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHH----HTCCGSS-EEEEESE--SSTTCS
T ss_pred hhHHHHHHHHhccccccceeEEEEcccccccccchhhc----ccceeee-eeecccee-cchhcc
Confidence 34677789998877789999999999999999886544 3342111 24556664 455444
No 4
>PRK10566 esterase; Provisional
Probab=92.46 E-value=0.27 Score=43.86 Aligned_cols=53 Identities=23% Similarity=0.320 Sum_probs=33.8
Q ss_pred HHHHHHHHHHcCCCCcCeEEEeecChhHHHHHHhHHHHHHhCCCCcEEEEeecCccc
Q 022081 59 WEALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHCDDFRERLPQHATVKCLADASFF 115 (303)
Q Consensus 59 ~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~f 115 (303)
+.+++++|..++.-+.++|.|.|.|+||.-++.-. ...|.-..+..+..++++
T Consensus 91 ~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~----~~~~~~~~~~~~~~~~~~ 143 (249)
T PRK10566 91 FPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIM----ARHPWVKCVASLMGSGYF 143 (249)
T ss_pred HHHHHHHHHhcCCcCccceeEEeecccHHHHHHHH----HhCCCeeEEEEeeCcHHH
Confidence 34567777765556789999999999999887432 334421223334456654
No 5
>PRK10115 protease 2; Provisional
Probab=91.55 E-value=0.22 Score=52.72 Aligned_cols=35 Identities=26% Similarity=0.299 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHcCCCCcCeEEEeecChhHHHHH
Q 022081 56 QLIWEALMDELLSVGMSNAKQAFLTGCSAGGLAAV 90 (303)
Q Consensus 56 ~~i~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~ 90 (303)
..-+.++.++|+++|+.++++|.+.|.||||+-+.
T Consensus 505 ~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~ 539 (686)
T PRK10115 505 FNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMG 539 (686)
T ss_pred HHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHH
Confidence 44677889999999999999999999999998654
No 6
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=91.50 E-value=0.19 Score=52.44 Aligned_cols=107 Identities=18% Similarity=0.101 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHcCCCCcCeEEEeecChhHHHHHHhHHHHHHhCCCCcEEEEeecCccccCCCCCccchhhHHHhhhhhhh
Q 022081 58 IWEALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHCDDFRERLPQHATVKCLADASFFLDESDVQGNRTMRSFYDDVFHL 137 (303)
Q Consensus 58 i~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~fld~~~~~g~~~~~~~~~~~~~~ 137 (303)
-+.+.++.|.+.++-++++|.++|.|.||+-|+.-.-.-- .+. .+++.+|.--+....... .. .++...-..
T Consensus 456 D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~-----a~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~ 527 (620)
T COG1506 456 DLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFK-----AAVAVAGGVDWLLYFGES-TE-GLRFDPEEN 527 (620)
T ss_pred HHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhh-----eEEeccCcchhhhhcccc-ch-hhcCCHHHh
Confidence 4556677776678888899999999999998876443322 222 233444321111111100 00 011101000
Q ss_pred ccccccCCcchhcccCCCccCCchHHhhcCCCCeeeeccchh
Q 022081 138 QGVAKSLDRNCLSRMGNSRCLFPREFIKNIRTPVFIVNPAYD 179 (303)
Q Consensus 138 ~~~~~~lp~~C~~~~~~~~C~f~~~~~~~i~tP~Filns~YD 179 (303)
. . -+.. ..+...=.-|-...+.|++|++||++.-|
T Consensus 528 ~---~-~~~~---~~~~~~~~sp~~~~~~i~~P~LliHG~~D 562 (620)
T COG1506 528 G---G-GPPE---DREKYEDRSPIFYADNIKTPLLLIHGEED 562 (620)
T ss_pred C---C-Cccc---ChHHHHhcChhhhhcccCCCEEEEeecCC
Confidence 0 0 0110 11123345667888999999999999887
No 7
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=91.02 E-value=0.39 Score=41.77 Aligned_cols=43 Identities=28% Similarity=0.209 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHc--CC-CCcCeEEEeecChhHHHHHHhHHHHHHh
Q 022081 57 LIWEALMDELLSV--GM-SNAKQAFLTGCSAGGLAAVIHCDDFRER 99 (303)
Q Consensus 57 ~i~~avl~~L~~~--g~-~~a~~v~lsG~SAGG~g~~~~~d~~~~~ 99 (303)
.-+.++++||+++ .+ -++++|+|+|.||||.=++.-+-..++.
T Consensus 50 ~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~ 95 (211)
T PF07859_consen 50 EDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDR 95 (211)
T ss_dssp HHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHT
T ss_pred cccccceeeeccccccccccccceEEeecccccchhhhhhhhhhhh
Confidence 3456677888763 11 3588999999999999888888777776
No 8
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=90.55 E-value=0.32 Score=48.39 Aligned_cols=57 Identities=14% Similarity=0.102 Sum_probs=40.1
Q ss_pred hHHHHHHHHHHHHH--cCCC-CcCeEEEeecChhHHHHHHhHHHHH--HhCCCCcEEEEeecCcccc
Q 022081 55 GQLIWEALMDELLS--VGMS-NAKQAFLTGCSAGGLAAVIHCDDFR--ERLPQHATVKCLADASFFL 116 (303)
Q Consensus 55 G~~i~~avl~~L~~--~g~~-~a~~v~lsG~SAGG~g~~~~~d~~~--~~lp~~~~v~~l~DsG~fl 116 (303)
|..-..++|+|..+ ..|+ ++++|.|.|.||||..+.+|.-.=. .++. ++|.-||-.+
T Consensus 185 Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~-----raI~~SGs~~ 246 (535)
T PF00135_consen 185 GLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFH-----RAILQSGSAL 246 (535)
T ss_dssp HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBS-----EEEEES--TT
T ss_pred hhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccc-----cccccccccc
Confidence 66678889999987 3564 8999999999999999887765511 2232 4566666443
No 9
>PRK13604 luxD acyl transferase; Provisional
Probab=90.29 E-value=1.3 Score=42.61 Aligned_cols=52 Identities=12% Similarity=-0.026 Sum_probs=37.0
Q ss_pred ehHHHHHHHHHHHHHcCCCCcCeEEEeecChhHHHHHHhHHHHHHhCCCCcEEEEeecCccc
Q 022081 54 RGQLIWEALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHCDDFRERLPQHATVKCLADASFF 115 (303)
Q Consensus 54 rG~~i~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~f 115 (303)
.|..-+.+++++|.++ ..++|.|.|.|.||.-+++-+. . + .++ .++.|||+.
T Consensus 90 ~g~~Dl~aaid~lk~~---~~~~I~LiG~SmGgava~~~A~----~-~-~v~-~lI~~sp~~ 141 (307)
T PRK13604 90 IGKNSLLTVVDWLNTR---GINNLGLIAASLSARIAYEVIN----E-I-DLS-FLITAVGVV 141 (307)
T ss_pred ccHHHHHHHHHHHHhc---CCCceEEEEECHHHHHHHHHhc----C-C-CCC-EEEEcCCcc
Confidence 3778999999999874 3467999999999987544331 1 1 222 277899865
No 10
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=90.19 E-value=0.98 Score=36.78 Aligned_cols=65 Identities=23% Similarity=0.330 Sum_probs=36.6
Q ss_pred ceEEEehHHH------HHHHHHHHHH--cCCCCcCeEEEeecChhHHHHHHhHHHHHHhCC-CCcEEEEeecCcc
Q 022081 49 TNLFFRGQLI------WEALMDELLS--VGMSNAKQAFLTGCSAGGLAAVIHCDDFRERLP-QHATVKCLADASF 114 (303)
Q Consensus 49 ~~l~frG~~i------~~avl~~L~~--~g~~~a~~v~lsG~SAGG~g~~~~~d~~~~~lp-~~~~v~~l~DsG~ 114 (303)
...-|+|... .+.++++|.+ +..+ ..+|+++|+|.||.=|.+-+-++.+..+ ...++++++=+++
T Consensus 31 ~~~vh~g~~~~~~~~~~~~~~~~l~~~~~~~~-~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P 104 (140)
T PF01764_consen 31 GGRVHSGFLDAAEDSLYDQILDALKELVEKYP-DYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAP 104 (140)
T ss_dssp THEEEHHHHHHHHCHHHHHHHHHHHHHHHHST-TSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S
T ss_pred ceEEehhHHHHHHHHHHHHHHHHHHHHHhccc-CccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCc
Confidence 3556667542 2233344433 1233 3799999999999755555555555443 2355666665543
No 11
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=87.22 E-value=0.85 Score=45.55 Aligned_cols=41 Identities=15% Similarity=0.103 Sum_probs=32.4
Q ss_pred hHHHHHHHHHHHHHc--CC-CCcCeEEEeecChhHHHHHHhHHH
Q 022081 55 GQLIWEALMDELLSV--GM-SNAKQAFLTGCSAGGLAAVIHCDD 95 (303)
Q Consensus 55 G~~i~~avl~~L~~~--g~-~~a~~v~lsG~SAGG~g~~~~~d~ 95 (303)
|..-..++|+|+.+. .+ .++++|.|.|.||||..+.++.-.
T Consensus 153 g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~ 196 (493)
T cd00312 153 GLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLS 196 (493)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhC
Confidence 567788889998863 33 589999999999999887766543
No 12
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=86.92 E-value=0.87 Score=40.27 Aligned_cols=37 Identities=22% Similarity=0.267 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHcCCCCcCeEEEeecChhHHHHHHhH
Q 022081 57 LIWEALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHC 93 (303)
Q Consensus 57 ~i~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~ 93 (303)
..++.++++|..+.--++++|+|.|.|+||..++.-+
T Consensus 77 ~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a 113 (212)
T TIGR01840 77 ESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLG 113 (212)
T ss_pred HHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHH
Confidence 4567788888764334678999999999999876544
No 13
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=86.69 E-value=0.91 Score=36.48 Aligned_cols=40 Identities=23% Similarity=0.346 Sum_probs=29.7
Q ss_pred ehHHHHHHHHHHHHHcCCCCcCeEEEeecChhHHHHHHhHH
Q 022081 54 RGQLIWEALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHCD 94 (303)
Q Consensus 54 rG~~i~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~d 94 (303)
.+...++.+++++.. +..++++|+|.|.|+||..+..-..
T Consensus 41 ~~~~~~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~~~ 80 (145)
T PF12695_consen 41 DGADAVERVLADIRA-GYPDPDRIILIGHSMGGAIAANLAA 80 (145)
T ss_dssp HHSHHHHHHHHHHHH-HHCTCCEEEEEEETHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHh-hcCCCCcEEEEEEccCcHHHHHHhh
Confidence 444578888888754 2338999999999999987665444
No 14
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=86.64 E-value=3.9 Score=40.60 Aligned_cols=36 Identities=22% Similarity=0.259 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHcCCCCcCeEEEeecChhHHHHHH
Q 022081 56 QLIWEALMDELLSVGMSNAKQAFLTGCSAGGLAAVI 91 (303)
Q Consensus 56 ~~i~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~ 91 (303)
....++++++|.....-+.++|.+.|.|.||+-++.
T Consensus 246 ~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~ 281 (414)
T PRK05077 246 SLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVR 281 (414)
T ss_pred HHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHH
Confidence 344578999887643346789999999999987654
No 15
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=85.24 E-value=1.8 Score=40.47 Aligned_cols=42 Identities=24% Similarity=0.141 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHcC--C-CCcCeEEEeecChhHHHHHHhHHHHHHh
Q 022081 58 IWEALMDELLSVG--M-SNAKQAFLTGCSAGGLAAVIHCDDFRER 99 (303)
Q Consensus 58 i~~avl~~L~~~g--~-~~a~~v~lsG~SAGG~g~~~~~d~~~~~ 99 (303)
-..+++.+|.++. + -++++|+|+|.||||.=+..-+...++.
T Consensus 132 d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~ 176 (312)
T COG0657 132 DAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDR 176 (312)
T ss_pred HHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhc
Confidence 3556777777531 3 2589999999999999999999999986
No 16
>PLN02408 phospholipase A1
Probab=82.16 E-value=5.3 Score=39.43 Aligned_cols=52 Identities=21% Similarity=0.276 Sum_probs=36.1
Q ss_pred CeEEEeecChhHHHHHHhHHHHHHhCCCCcEEEEeecCccccCCCCCccchhhHHHhh
Q 022081 75 KQAFLTGCSAGGLAAVIHCDDFRERLPQHATVKCLADASFFLDESDVQGNRTMRSFYD 132 (303)
Q Consensus 75 ~~v~lsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~fld~~~~~g~~~~~~~~~ 132 (303)
..|+++|+|-||-=|.|.+-.++..++....|.++.=++. -.|+.....+++
T Consensus 200 ~sI~vTGHSLGGALAtLaA~dl~~~~~~~~~V~v~tFGsP------RVGN~~Fa~~~~ 251 (365)
T PLN02408 200 LSLTITGHSLGAALATLTAYDIKTTFKRAPMVTVISFGGP------RVGNRSFRRQLE 251 (365)
T ss_pred ceEEEeccchHHHHHHHHHHHHHHhcCCCCceEEEEcCCC------CcccHHHHHHHH
Confidence 4799999999999999999999988763334556654443 235544444443
No 17
>PRK10162 acetyl esterase; Provisional
Probab=82.01 E-value=2.1 Score=40.62 Aligned_cols=45 Identities=18% Similarity=0.076 Sum_probs=33.6
Q ss_pred hHHHHHHHHHHHHHc--CCC-CcCeEEEeecChhHHHHHHhHHHHHHh
Q 022081 55 GQLIWEALMDELLSV--GMS-NAKQAFLTGCSAGGLAAVIHCDDFRER 99 (303)
Q Consensus 55 G~~i~~avl~~L~~~--g~~-~a~~v~lsG~SAGG~g~~~~~d~~~~~ 99 (303)
+..-..++++||.+. .+. ++++|+|.|.||||.-++.-+-.+++.
T Consensus 131 ~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~ 178 (318)
T PRK10162 131 AIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDK 178 (318)
T ss_pred cHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhc
Confidence 445566778888752 233 578999999999999988877777654
No 18
>PRK11460 putative hydrolase; Provisional
Probab=81.26 E-value=6.6 Score=35.48 Aligned_cols=31 Identities=19% Similarity=0.137 Sum_probs=21.5
Q ss_pred HHHHHHHHcCCCCcCeEEEeecChhHHHHHH
Q 022081 61 ALMDELLSVGMSNAKQAFLTGCSAGGLAAVI 91 (303)
Q Consensus 61 avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~ 91 (303)
++++++..+.-.+.++|+|.|.|.||.-++.
T Consensus 89 ~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~ 119 (232)
T PRK11460 89 ETVRYWQQQSGVGASATALIGFSQGAIMALE 119 (232)
T ss_pred HHHHHHHHhcCCChhhEEEEEECHHHHHHHH
Confidence 4455555431124689999999999988864
No 19
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=81.04 E-value=4.1 Score=38.08 Aligned_cols=55 Identities=20% Similarity=0.294 Sum_probs=35.8
Q ss_pred HHHHHHHHHHc-CCCCcCeEEEeecChhHHHHHHhHHHHHHhCCCCcEEEEeecCccccC
Q 022081 59 WEALMDELLSV-GMSNAKQAFLTGCSAGGLAAVIHCDDFRERLPQHATVKCLADASFFLD 117 (303)
Q Consensus 59 ~~avl~~L~~~-g~~~a~~v~lsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~fld 117 (303)
+.++|+.|.+. |+ ..++|.|.|.|.||.-+.+-+..+.+++ .++.++.=+|.++.
T Consensus 96 la~~l~~L~~~~g~-~~~~i~lIGhSlGa~vAg~~a~~~~~~v---~~iv~LDPa~p~f~ 151 (275)
T cd00707 96 LAKFLDFLVDNTGL-SLENVHLIGHSLGAHVAGFAGKRLNGKL---GRITGLDPAGPLFS 151 (275)
T ss_pred HHHHHHHHHHhcCC-ChHHEEEEEecHHHHHHHHHHHHhcCcc---ceeEEecCCccccc
Confidence 44556666653 33 4678999999999988877765554433 24555555676554
No 20
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=80.68 E-value=6.2 Score=35.24 Aligned_cols=39 Identities=28% Similarity=0.309 Sum_probs=29.5
Q ss_pred cCeEEEeecChhHHHHHHhHHHHHHhCCCCcEEEEeecCc
Q 022081 74 AKQAFLTGCSAGGLAAVIHCDDFRERLPQHATVKCLADAS 113 (303)
Q Consensus 74 a~~v~lsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG 113 (303)
..+|+|+|+|-||.=|.+-+-.++...+ ..++.++.=++
T Consensus 127 ~~~i~vtGHSLGGaiA~l~a~~l~~~~~-~~~i~~~tFg~ 165 (229)
T cd00519 127 DYKIIVTGHSLGGALASLLALDLRLRGP-GSDVTVYTFGQ 165 (229)
T ss_pred CceEEEEccCHHHHHHHHHHHHHHhhCC-CCceEEEEeCC
Confidence 4679999999999888888888887764 34566666544
No 21
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=78.99 E-value=2 Score=38.40 Aligned_cols=42 Identities=17% Similarity=0.237 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHcCCCCc-CeEEEeecChhHHHHHHhHHHHHHhC
Q 022081 58 IWEALMDELLSVGMSNA-KQAFLTGCSAGGLAAVIHCDDFRERL 100 (303)
Q Consensus 58 i~~avl~~L~~~g~~~a-~~v~lsG~SAGG~g~~~~~d~~~~~l 100 (303)
+.++++.++.+ .++-. ++..|+|+|.||++|+...=.--+.+
T Consensus 98 l~~el~p~i~~-~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F 140 (251)
T PF00756_consen 98 LTEELIPYIEA-NYRTDPDRRAIAGHSMGGYGALYLALRHPDLF 140 (251)
T ss_dssp HHTHHHHHHHH-HSSEEECCEEEEEETHHHHHHHHHHHHSTTTE
T ss_pred hhccchhHHHH-hcccccceeEEeccCCCcHHHHHHHHhCcccc
Confidence 44555555554 45432 23899999999999986544433344
No 22
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=78.40 E-value=2.8 Score=41.75 Aligned_cols=44 Identities=34% Similarity=0.498 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHH---c--C-CCCcCeEEEeecChhHHHHHHhHHHHHHhC
Q 022081 57 LIWEALMDELLS---V--G-MSNAKQAFLTGCSAGGLAAVIHCDDFRERL 100 (303)
Q Consensus 57 ~i~~avl~~L~~---~--g-~~~a~~v~lsG~SAGG~g~~~~~d~~~~~l 100 (303)
.-++.+.++|++ + . ..++++.+|+|.|.||++|+.-.=.--++|
T Consensus 264 ~f~~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~F 313 (411)
T PRK10439 264 DFWLAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERF 313 (411)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccc
Confidence 345566677765 1 2 246889999999999999886544333333
No 23
>PLN02802 triacylglycerol lipase
Probab=78.14 E-value=8 Score=39.74 Aligned_cols=39 Identities=21% Similarity=0.290 Sum_probs=30.9
Q ss_pred CeEEEeecChhHHHHHHhHHHHHHhCCCCcEEEEeecCc
Q 022081 75 KQAFLTGCSAGGLAAVIHCDDFRERLPQHATVKCLADAS 113 (303)
Q Consensus 75 ~~v~lsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG 113 (303)
.+|+++|+|-||-=|.|.+.+++...+....|.++.=++
T Consensus 330 ~sI~VTGHSLGGALAtLaA~dL~~~~~~~~pV~vyTFGs 368 (509)
T PLN02802 330 LSITVTGHSLGAALALLVADELATCVPAAPPVAVFSFGG 368 (509)
T ss_pred ceEEEeccchHHHHHHHHHHHHHHhCCCCCceEEEEcCC
Confidence 479999999999999999999998876433566665444
No 24
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=77.99 E-value=3.4 Score=38.14 Aligned_cols=23 Identities=26% Similarity=0.378 Sum_probs=19.4
Q ss_pred CcCeEEEeecChhHHHHHHhHHH
Q 022081 73 NAKQAFLTGCSAGGLAAVIHCDD 95 (303)
Q Consensus 73 ~a~~v~lsG~SAGG~g~~~~~d~ 95 (303)
+.+++.|+|.|+||.+++..+-.
T Consensus 136 ~~~~~~~~G~S~GG~~a~~~a~~ 158 (275)
T TIGR02821 136 DGERQGITGHSMGGHGALVIALK 158 (275)
T ss_pred CCCceEEEEEChhHHHHHHHHHh
Confidence 56789999999999998877654
No 25
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=77.78 E-value=6 Score=33.01 Aligned_cols=56 Identities=21% Similarity=0.186 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHcCCC--CcCeEEEeecChhHHHHHHhHHHHHHhCC-CCcEEEEeecCc
Q 022081 57 LIWEALMDELLSVGMS--NAKQAFLTGCSAGGLAAVIHCDDFRERLP-QHATVKCLADAS 113 (303)
Q Consensus 57 ~i~~avl~~L~~~g~~--~a~~v~lsG~SAGG~g~~~~~d~~~~~lp-~~~~v~~l~DsG 113 (303)
.+++.+...+.+ .+. ...+|+++|+|.||-=|.+-+-+++...+ ...++..+.-.+
T Consensus 9 ~~~~~i~~~~~~-~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 9 SLANLVLPLLKS-ALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHH-HHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 344444444332 232 45799999999999777776777766543 133444444333
No 26
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=77.51 E-value=2.3 Score=44.71 Aligned_cols=33 Identities=24% Similarity=0.310 Sum_probs=29.7
Q ss_pred hHHHHHHHHHHHHHcCCCCcCeEEEeecChhHH
Q 022081 55 GQLIWEALMDELLSVGMSNAKQAFLTGCSAGGL 87 (303)
Q Consensus 55 G~~i~~avl~~L~~~g~~~a~~v~lsG~SAGG~ 87 (303)
...-+-|+-+.|...|+...++++..|.||||+
T Consensus 507 Tf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGm 539 (682)
T COG1770 507 TFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGM 539 (682)
T ss_pred cHHHHHHHHHHHHHcCcCCccceEEeccCchhH
Confidence 345788999999999999999999999999996
No 27
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=76.81 E-value=4.2 Score=36.02 Aligned_cols=35 Identities=29% Similarity=0.444 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHcCCCCcCeEEEeecChhHHHHHHhH
Q 022081 58 IWEALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHC 93 (303)
Q Consensus 58 i~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~ 93 (303)
.+.++|+.+.+++ -.+++|+|.|.|-||.-++.-+
T Consensus 89 ~l~~li~~~~~~~-i~~~ri~l~GFSQGa~~al~~~ 123 (216)
T PF02230_consen 89 RLDELIDEEVAYG-IDPSRIFLGGFSQGAAMALYLA 123 (216)
T ss_dssp HHHHHHHHHHHTT---GGGEEEEEETHHHHHHHHHH
T ss_pred HHHHHHHHHHHcC-CChhheehhhhhhHHHHHHHHH
Confidence 4556666666555 6678999999999998777654
No 28
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=76.56 E-value=3.4 Score=37.78 Aligned_cols=40 Identities=25% Similarity=0.331 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHcCCCCcCeEEEeecChhHHHHHHhHHHHHHhCC
Q 022081 58 IWEALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHCDDFRERLP 101 (303)
Q Consensus 58 i~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~d~~~~~lp 101 (303)
.+.++++++..+.--++++|.++|.|+||.-+. .+.-.+|
T Consensus 80 ~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~----~la~~~p 119 (220)
T PF10503_consen 80 FIAALVDYVAARYNIDPSRVYVTGLSNGGMMAN----VLACAYP 119 (220)
T ss_pred hHHHHHHhHhhhcccCCCceeeEEECHHHHHHH----HHHHhCC
Confidence 577888888874334889999999999996553 4555666
No 29
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=75.94 E-value=6.1 Score=39.11 Aligned_cols=37 Identities=32% Similarity=0.362 Sum_probs=28.7
Q ss_pred HHHHHHHHHH-cCCCCcCeEEEeecChhHHHHHHhHHHHHH
Q 022081 59 WEALMDELLS-VGMSNAKQAFLTGCSAGGLAAVIHCDDFRE 98 (303)
Q Consensus 59 ~~avl~~L~~-~g~~~a~~v~lsG~SAGG~g~~~~~d~~~~ 98 (303)
+-++.++|.+ .| .+.|+|.|.||||--++--..+++.
T Consensus 181 lv~~Y~~Lv~~~G---~~nI~LmGDSAGGnL~Ls~LqyL~~ 218 (374)
T PF10340_consen 181 LVATYDYLVESEG---NKNIILMGDSAGGNLALSFLQYLKK 218 (374)
T ss_pred HHHHHHHHHhccC---CCeEEEEecCccHHHHHHHHHHHhh
Confidence 3445677773 33 5789999999999998888888877
No 30
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=75.93 E-value=3.1 Score=38.00 Aligned_cols=32 Identities=31% Similarity=0.474 Sum_probs=23.5
Q ss_pred HHHHHHHcCCCCcCeEEEeecChhHHHHHHhHH
Q 022081 62 LMDELLSVGMSNAKQAFLTGCSAGGLAAVIHCD 94 (303)
Q Consensus 62 vl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~d 94 (303)
|++.|+++|+. .+...++|.|||++-+.+++-
T Consensus 17 Vl~~L~e~gi~-~~~~~i~G~SAGAl~aa~~as 48 (233)
T cd07224 17 VLSLLIEAGVI-NETTPLAGASAGSLAAACSAS 48 (233)
T ss_pred HHHHHHHcCCC-CCCCEEEEEcHHHHHHHHHHc
Confidence 57777777765 234589999999998776653
No 31
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=75.68 E-value=4.4 Score=31.31 Aligned_cols=48 Identities=21% Similarity=0.241 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHc-CCCCcCeEEEeecChh-HHHHHHhHHHHHHhCCCCcEEEE
Q 022081 56 QLIWEALMDELLSV-GMSNAKQAFLTGCSAG-GLAAVIHCDDFRERLPQHATVKC 108 (303)
Q Consensus 56 ~~i~~avl~~L~~~-g~~~a~~v~lsG~SAG-G~g~~~~~d~~~~~lp~~~~v~~ 108 (303)
.++++.-|++..++ .+..+++||+.|+|.| |++ -++...+...+....
T Consensus 20 ~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLA-----sRIa~aFg~gA~TiG 69 (78)
T PF12242_consen 20 ARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLA-----SRIAAAFGAGADTIG 69 (78)
T ss_dssp HHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHH-----HHHHHHHCC--EEEE
T ss_pred HHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHH-----HHHHHHhcCCCCEEE
Confidence 45778888888873 5677899999999987 333 345555554554443
No 32
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=74.90 E-value=8.1 Score=37.65 Aligned_cols=69 Identities=19% Similarity=0.195 Sum_probs=41.5
Q ss_pred EEEehHHHHHHHHHH-HHHcCCCCcCeEEEeecChhHHHHHHhHHHHHHhCCCCcEEEEeecCccccCCCC
Q 022081 51 LFFRGQLIWEALMDE-LLSVGMSNAKQAFLTGCSAGGLAAVIHCDDFRERLPQHATVKCLADASFFLDESD 120 (303)
Q Consensus 51 l~frG~~i~~avl~~-L~~~g~~~a~~v~lsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~fld~~~ 120 (303)
-|.-|-.-++.+++. ++. --.+.++|+|+|.||||--|..=+.++++--+...++++..=--.|+...+
T Consensus 142 ~y~D~~~Al~w~~~~~~~~-~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~ 211 (336)
T KOG1515|consen 142 AYDDGWAALKWVLKNSWLK-LGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTD 211 (336)
T ss_pred cchHHHHHHHHHHHhHHHH-hCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCC
Confidence 344455555555553 232 245788899999999998888878877764211334544443344444443
No 33
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=74.82 E-value=3.5 Score=35.42 Aligned_cols=31 Identities=23% Similarity=0.340 Sum_probs=23.2
Q ss_pred HHHHHHHHcCCCCcCeEEEeecChhHHHHHHhHH
Q 022081 61 ALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHCD 94 (303)
Q Consensus 61 avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~d 94 (303)
-|++.|.++|+. --+++|+|||++-+.+.+-
T Consensus 15 Gvl~aL~e~gi~---~d~v~GtSaGAi~aa~~a~ 45 (172)
T cd07198 15 GVAKALRERGPL---IDIIAGTSAGAIVAALLAS 45 (172)
T ss_pred HHHHHHHHcCCC---CCEEEEECHHHHHHHHHHc
Confidence 357777777776 5689999999988766554
No 34
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=74.37 E-value=1.6 Score=44.48 Aligned_cols=47 Identities=23% Similarity=0.371 Sum_probs=30.3
Q ss_pred ceEEEehHH-----HHHHHHHHHHHcCCCCcCeEEEeecChhHHHHHHhHHHH
Q 022081 49 TNLFFRGQL-----IWEALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHCDDF 96 (303)
Q Consensus 49 ~~l~frG~~-----i~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~d~~ 96 (303)
.+-.+-|.. |.+.|-+.|..-||+ ++++||||-|+|.+||+++...+
T Consensus 327 GGaFYlGs~eyE~~I~~~I~~~L~~LgF~-~~qLILSGlSMGTfgAlYYga~l 378 (511)
T TIGR03712 327 GGAFYLGSDEYEQGIINVIQEKLDYLGFD-HDQLILSGLSMGTFGALYYGAKL 378 (511)
T ss_pred cceeeeCcHHHHHHHHHHHHHHHHHhCCC-HHHeeeccccccchhhhhhcccC
Confidence 344555655 333333333333564 67899999999999999887543
No 35
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=74.26 E-value=7.1 Score=36.86 Aligned_cols=64 Identities=22% Similarity=0.229 Sum_probs=41.1
Q ss_pred ehHHHHHHHHHHHHH-------cCCCCcCeEEEeecChhHHHHHHhHHHHHHhCCCCcE--EEEeecCccccCC
Q 022081 54 RGQLIWEALMDELLS-------VGMSNAKQAFLTGCSAGGLAAVIHCDDFRERLPQHAT--VKCLADASFFLDE 118 (303)
Q Consensus 54 rG~~i~~avl~~L~~-------~g~~~a~~v~lsG~SAGG~g~~~~~d~~~~~lp~~~~--v~~l~DsG~fld~ 118 (303)
.|..--.++||-+.. .|++...+|.|.|.|-||.+++.-. .++..+-++.+ +++.+=.|.-.|.
T Consensus 43 ~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA-~l~~~YApeL~~~l~Gaa~gg~~~dl 115 (290)
T PF03583_consen 43 NGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAA-ELAPSYAPELNRDLVGAAAGGPPADL 115 (290)
T ss_pred CcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHH-HHhHHhCcccccceeEEeccCCccCH
Confidence 444444444444433 2555668999999999999997655 45555544666 7777766655553
No 36
>PLN02454 triacylglycerol lipase
Probab=74.25 E-value=13 Score=37.38 Aligned_cols=64 Identities=25% Similarity=0.290 Sum_probs=38.9
Q ss_pred HHHHHHcCCCCcC-eEEEeecChhHHHHHHhHHHHHHhCC--CCcEEEEeecCccccCCCCCccchhhHHHhhh
Q 022081 63 MDELLSVGMSNAK-QAFLTGCSAGGLAAVIHCDDFRERLP--QHATVKCLADASFFLDESDVQGNRTMRSFYDD 133 (303)
Q Consensus 63 l~~L~~~g~~~a~-~v~lsG~SAGG~g~~~~~d~~~~~lp--~~~~v~~l~DsG~fld~~~~~g~~~~~~~~~~ 133 (303)
|++|++ ..++.+ .|+++|+|-||.-|.|.+-+++.... ....|.++.=++. -.|+..+..++..
T Consensus 216 V~~l~~-~Yp~~~~sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFGsP------RVGN~~Fa~~~~~ 282 (414)
T PLN02454 216 IKELLE-RYKDEKLSIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFGSP------QVGNKEFNDRFKE 282 (414)
T ss_pred HHHHHH-hCCCCCceEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeCCC------cccCHHHHHHHHh
Confidence 344443 244443 69999999999999999988876532 2334555554442 2355444444443
No 37
>PLN02442 S-formylglutathione hydrolase
Probab=71.12 E-value=5.1 Score=37.34 Aligned_cols=22 Identities=27% Similarity=0.306 Sum_probs=18.7
Q ss_pred CcCeEEEeecChhHHHHHHhHH
Q 022081 73 NAKQAFLTGCSAGGLAAVIHCD 94 (303)
Q Consensus 73 ~a~~v~lsG~SAGG~g~~~~~d 94 (303)
+.++++|+|.|+||++|+..+-
T Consensus 141 ~~~~~~i~G~S~GG~~a~~~a~ 162 (283)
T PLN02442 141 DTSRASIFGHSMGGHGALTIYL 162 (283)
T ss_pred CCCceEEEEEChhHHHHHHHHH
Confidence 6688999999999999886554
No 38
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=70.35 E-value=9.5 Score=33.90 Aligned_cols=35 Identities=29% Similarity=0.479 Sum_probs=22.1
Q ss_pred HHHHHHHHcCCCCcCeEEEeecChhHHHHHHhHHHHHHhCC
Q 022081 61 ALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHCDDFRERLP 101 (303)
Q Consensus 61 avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~d~~~~~lp 101 (303)
+.++.+++. .. ++.++|.|+|.||+-|. +++++++
T Consensus 47 ~~l~~~i~~-~~-~~~~~liGSSlGG~~A~----~La~~~~ 81 (187)
T PF05728_consen 47 AQLEQLIEE-LK-PENVVLIGSSLGGFYAT----YLAERYG 81 (187)
T ss_pred HHHHHHHHh-CC-CCCeEEEEEChHHHHHH----HHHHHhC
Confidence 444455542 22 23399999999997665 4566665
No 39
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=69.71 E-value=7.8 Score=36.07 Aligned_cols=66 Identities=21% Similarity=0.265 Sum_probs=39.3
Q ss_pred CCCcCeEEEeecChhHHHHHHhHHHHHHhCC------CCcEEEEee-cCccccCCCCCccchhhHHHhhhhhh
Q 022081 71 MSNAKQAFLTGCSAGGLAAVIHCDDFRERLP------QHATVKCLA-DASFFLDESDVQGNRTMRSFYDDVFH 136 (303)
Q Consensus 71 ~~~a~~v~lsG~SAGG~g~~~~~d~~~~~lp------~~~~v~~l~-DsG~fld~~~~~g~~~~~~~~~~~~~ 136 (303)
...++.|+++|||-||+|--+--..-++-+. .-.+..-|. |+|.+.---|++-.+.++.+-.++..
T Consensus 4 ~~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~ 76 (289)
T KOG1209|consen 4 QSQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRA 76 (289)
T ss_pred ccCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhh
Confidence 4578899999999999996665444443221 000112233 88988655566655555555554433
No 40
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=69.23 E-value=5 Score=37.03 Aligned_cols=32 Identities=31% Similarity=0.363 Sum_probs=22.8
Q ss_pred HHHHHHHcCCCCcCeE-EEeecChhHHHHHHhH
Q 022081 62 LMDELLSVGMSNAKQA-FLTGCSAGGLAAVIHC 93 (303)
Q Consensus 62 vl~~L~~~g~~~a~~v-~lsG~SAGG~g~~~~~ 93 (303)
|++.|++.|..--+++ .++|+|||++-+.+.+
T Consensus 17 Vl~~L~e~g~~l~~~~~~i~GtSaGAl~aa~~a 49 (246)
T cd07222 17 AAKALLRHGKKLLKRVKRFAGASAGSLVAAVLL 49 (246)
T ss_pred HHHHHHHcCchhhccCCEEEEECHHHHHHHHHh
Confidence 5677777676433333 7899999999877663
No 41
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=68.94 E-value=5.7 Score=36.69 Aligned_cols=30 Identities=27% Similarity=0.221 Sum_probs=22.4
Q ss_pred HHHHHHcCCCCcCeEEEeecChhHHHHHHhH
Q 022081 63 MDELLSVGMSNAKQAFLTGCSAGGLAAVIHC 93 (303)
Q Consensus 63 l~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~ 93 (303)
+++++. -+++++.+++.|+|||+--++.-.
T Consensus 125 v~filk-~~~n~k~l~~gGHSaGAHLa~qav 154 (270)
T KOG4627|consen 125 VNFILK-YTENTKVLTFGGHSAGAHLAAQAV 154 (270)
T ss_pred HHHHHH-hcccceeEEEcccchHHHHHHHHH
Confidence 555554 578999999999999986554433
No 42
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=68.25 E-value=12 Score=33.52 Aligned_cols=55 Identities=24% Similarity=0.321 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHcCCCCcCeEEEeecChhHHHHHHhHHHHHHhCCCCcEEEEeecCcccc
Q 022081 58 IWEALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHCDDFRERLPQHATVKCLADASFFL 116 (303)
Q Consensus 58 i~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~fl 116 (303)
-++.++++|.++..-++++|-|.|.|-||--|++ ++..+|.=..|..++.|++..
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALl----lAs~~~~i~avVa~~ps~~~~ 59 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALL----LASRFPQISAVVAISPSSVVF 59 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHH----HHHHSSSEEEEEEES--SB--
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHH----HHhcCCCccEEEEeCCceeEe
Confidence 3678999998754556789999999999987776 456676323366667777655
No 43
>PLN03037 lipase class 3 family protein; Provisional
Probab=67.35 E-value=20 Score=37.04 Aligned_cols=41 Identities=17% Similarity=0.306 Sum_probs=31.4
Q ss_pred CcCeEEEeecChhHHHHHHhHHHHHHhCCCCcEEEEeecCc
Q 022081 73 NAKQAFLTGCSAGGLAAVIHCDDFRERLPQHATVKCLADAS 113 (303)
Q Consensus 73 ~a~~v~lsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG 113 (303)
...+|+|+|+|-||--|.|++-+++..+|....|.++.=++
T Consensus 316 e~~SItVTGHSLGGALAtLaA~DIa~~~p~~~~VtvyTFGs 356 (525)
T PLN03037 316 EEVSLTITGHSLGGALALLNAYEAARSVPALSNISVISFGA 356 (525)
T ss_pred CcceEEEeccCHHHHHHHHHHHHHHHhCCCCCCeeEEEecC
Confidence 45589999999999999999999998877432455555443
No 44
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=67.15 E-value=6.3 Score=36.27 Aligned_cols=32 Identities=19% Similarity=0.219 Sum_probs=22.2
Q ss_pred HHHHHHHcCCCCcCe-EEEeecChhHHHHHHhH
Q 022081 62 LMDELLSVGMSNAKQ-AFLTGCSAGGLAAVIHC 93 (303)
Q Consensus 62 vl~~L~~~g~~~a~~-v~lsG~SAGG~g~~~~~ 93 (303)
|++.|+++|..-... -.++|+|||++-+.+.+
T Consensus 17 Vl~~L~e~g~~l~~~~~~i~GtSAGAl~aa~~a 49 (243)
T cd07204 17 VASALREHAPRLLQNARRIAGASAGAIVAAVVL 49 (243)
T ss_pred HHHHHHHcCcccccCCCEEEEEcHHHHHHHHHH
Confidence 566777667643232 48999999999876544
No 45
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=66.97 E-value=8 Score=35.18 Aligned_cols=34 Identities=24% Similarity=0.368 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHc---CCCCcCeEEEeecChhHHHHHH
Q 022081 58 IWEALMDELLSV---GMSNAKQAFLTGCSAGGLAAVI 91 (303)
Q Consensus 58 i~~avl~~L~~~---g~~~a~~v~lsG~SAGG~g~~~ 91 (303)
-+...+++|++. .....++|+|.|+|.||+-+-.
T Consensus 65 ~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~ 101 (225)
T PF07819_consen 65 FLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARS 101 (225)
T ss_pred HHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHH
Confidence 344556666552 3467899999999999986543
No 46
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=66.80 E-value=22 Score=30.95 Aligned_cols=52 Identities=17% Similarity=0.215 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHcCCCCcCeEEEeecChhHHHHHHhHHHHHHhCCCCcEEEEeecC
Q 022081 58 IWEALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHCDDFRERLPQHATVKCLADA 112 (303)
Q Consensus 58 i~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~Ds 112 (303)
.....++.+.+. .++ ...+|.|.|.||+=|+-=+-.+.+. ...+...++.|+
T Consensus 51 la~~y~~~I~~~-~~~-gp~~L~G~S~Gg~lA~E~A~~Le~~-G~~v~~l~liD~ 102 (229)
T PF00975_consen 51 LASRYAEAIRAR-QPE-GPYVLAGWSFGGILAFEMARQLEEA-GEEVSRLILIDS 102 (229)
T ss_dssp HHHHHHHHHHHH-TSS-SSEEEEEETHHHHHHHHHHHHHHHT-T-SESEEEEESC
T ss_pred HHHHHHHHhhhh-CCC-CCeeehccCccHHHHHHHHHHHHHh-hhccCceEEecC
Confidence 334444444442 122 2899999999999888877777777 324555666775
No 47
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=66.00 E-value=19 Score=33.66 Aligned_cols=35 Identities=17% Similarity=0.177 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHcCCCCcCeEEEeecChhHHHHHHh
Q 022081 58 IWEALMDELLSVGMSNAKQAFLTGCSAGGLAAVIH 92 (303)
Q Consensus 58 i~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~ 92 (303)
-+.++++.|....-....+++|.|.|.||.-++..
T Consensus 117 D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~ 151 (330)
T PLN02298 117 DCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLI 151 (330)
T ss_pred HHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHH
Confidence 45667777664211123469999999999877643
No 48
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=65.91 E-value=7 Score=36.20 Aligned_cols=31 Identities=26% Similarity=0.136 Sum_probs=20.0
Q ss_pred HHHHHHHcCCCCcCeEEEeecChhHHHHHHhH
Q 022081 62 LMDELLSVGMSNAKQAFLTGCSAGGLAAVIHC 93 (303)
Q Consensus 62 vl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~ 93 (303)
|++.|.++|...... .++|+|||++-+...+
T Consensus 18 Vl~aL~e~g~~~~~d-~i~GtSAGAl~aa~~a 48 (245)
T cd07218 18 VAVCLKKYAPHLLLN-KISGASAGALAACCLL 48 (245)
T ss_pred HHHHHHHhCcccCCC-eEEEEcHHHHHHHHHH
Confidence 466666656321112 3999999999877643
No 49
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=65.10 E-value=9.7 Score=35.10 Aligned_cols=36 Identities=14% Similarity=0.114 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHcCCCCcCeEEEeecChhHHHHHHhH
Q 022081 57 LIWEALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHC 93 (303)
Q Consensus 57 ~i~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~ 93 (303)
.-+.++++.|.. ..+..++|+|.|.|.||+-++..+
T Consensus 83 ~d~~~~~~~l~~-~~~g~~~i~l~G~S~Gg~~a~~~a 118 (274)
T TIGR03100 83 ADIAAAIDAFRE-AAPHLRRIVAWGLCDAASAALLYA 118 (274)
T ss_pred HHHHHHHHHHHh-hCCCCCcEEEEEECHHHHHHHHHh
Confidence 356777887764 344457899999999999877664
No 50
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=63.38 E-value=19 Score=33.67 Aligned_cols=61 Identities=21% Similarity=0.210 Sum_probs=37.2
Q ss_pred EehHHHHHHHHHHHHHcCCCCcCeEEEeecChhHHHHHHhHHHHH--HhCCCCcEEEEeecCccccC
Q 022081 53 FRGQLIWEALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHCDDFR--ERLPQHATVKCLADASFFLD 117 (303)
Q Consensus 53 frG~~i~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~d~~~--~~lp~~~~v~~l~DsG~fld 117 (303)
.+-..=+++||..|..+ -.-+++=+.|+|.||++++...-.-. ..+|+ . -+++.-+|.|-.
T Consensus 83 ~~qa~wl~~vl~~L~~~--Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~-l-~K~V~Ia~pfng 145 (255)
T PF06028_consen 83 KKQAKWLKKVLKYLKKK--YHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPK-L-NKLVTIAGPFNG 145 (255)
T ss_dssp HHHHHHHHHHHHHHHHC--C--SEEEEEEETHHHHHHHHHHHHCTTGTTS-E-E-EEEEEES--TTT
T ss_pred HHHHHHHHHHHHHHHHh--cCCCEEeEEEECccHHHHHHHHHHhccCCCCcc-c-ceEEEeccccCc
Confidence 34455678889998873 23678999999999999875443322 23552 2 355666777743
No 51
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=63.10 E-value=26 Score=28.98 Aligned_cols=37 Identities=27% Similarity=0.337 Sum_probs=24.3
Q ss_pred CeEEEeecChhHHHHHHhHHHHHHhCCCCcEEEEeecCccc
Q 022081 75 KQAFLTGCSAGGLAAVIHCDDFRERLPQHATVKCLADASFF 115 (303)
Q Consensus 75 ~~v~lsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~f 115 (303)
++++|.|.|.||.-++..+ ...|..++-.++.+++..
T Consensus 66 ~~~~lvG~S~Gg~~a~~~a----~~~p~~v~~~vl~~~~~~ 102 (228)
T PF12697_consen 66 KKVILVGHSMGGMIALRLA----ARYPDRVKGLVLLSPPPP 102 (228)
T ss_dssp SSEEEEEETHHHHHHHHHH----HHSGGGEEEEEEESESSS
T ss_pred ccccccccccccccccccc----cccccccccceeeccccc
Confidence 6899999999998776655 335533443445555543
No 52
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=62.42 E-value=8.5 Score=39.33 Aligned_cols=37 Identities=19% Similarity=0.139 Sum_probs=30.1
Q ss_pred ehHHHHHHHHHHHHHc--CC-CCcCeEEEeecChhHHHHH
Q 022081 54 RGQLIWEALMDELLSV--GM-SNAKQAFLTGCSAGGLAAV 90 (303)
Q Consensus 54 rG~~i~~avl~~L~~~--g~-~~a~~v~lsG~SAGG~g~~ 90 (303)
-|..-..++|+|..+. -| ++++.|-|.|.||||..++
T Consensus 156 ~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~ 195 (491)
T COG2272 156 LGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASIL 195 (491)
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHH
Confidence 4777888889998862 45 4899999999999998754
No 53
>PLN02310 triacylglycerol lipase
Probab=61.94 E-value=30 Score=34.70 Aligned_cols=40 Identities=20% Similarity=0.252 Sum_probs=30.7
Q ss_pred cCeEEEeecChhHHHHHHhHHHHHHhCCCCcEEEEeecCcc
Q 022081 74 AKQAFLTGCSAGGLAAVIHCDDFRERLPQHATVKCLADASF 114 (303)
Q Consensus 74 a~~v~lsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~ 114 (303)
..+|++||+|-||-=|.|.+..++..++ ...|.++.=++.
T Consensus 208 ~~sI~vTGHSLGGALAtLaA~dl~~~~~-~~~v~vyTFGsP 247 (405)
T PLN02310 208 EVSLTVTGHSLGGALALLNAYEAATTIP-DLFVSVISFGAP 247 (405)
T ss_pred cceEEEEcccHHHHHHHHHHHHHHHhCc-CcceeEEEecCC
Confidence 3589999999999999999988887776 445666655543
No 54
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=61.42 E-value=22 Score=30.38 Aligned_cols=32 Identities=19% Similarity=0.404 Sum_probs=23.0
Q ss_pred HHHHHHHHHHcCCCCcCeEEEeecChhHHHHHHhH
Q 022081 59 WEALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHC 93 (303)
Q Consensus 59 ~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~ 93 (303)
---|++.|.++|+. . =+++|.|||++-+.+.+
T Consensus 15 ~~Gvl~~L~~~~~~-~--d~i~GtSaGal~a~~~a 46 (175)
T cd07205 15 HIGVLKALEEAGIP-I--DIVSGTSAGAIVGALYA 46 (175)
T ss_pred HHHHHHHHHHcCCC-e--eEEEEECHHHHHHHHHH
Confidence 34567777776653 3 48999999999876655
No 55
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=60.88 E-value=14 Score=34.80 Aligned_cols=39 Identities=23% Similarity=0.217 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHcCCC---------CcCeEEEeecChhHHHHHHhHHHH
Q 022081 57 LIWEALMDELLSVGMS---------NAKQAFLTGCSAGGLAAVIHCDDF 96 (303)
Q Consensus 57 ~i~~avl~~L~~~g~~---------~a~~v~lsG~SAGG~g~~~~~d~~ 96 (303)
+.+.++++||.+ ++. +.++|-|+|+|+||-.++.-+-..
T Consensus 65 ~~~~~vi~Wl~~-~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~ 112 (259)
T PF12740_consen 65 ASAAEVIDWLAK-GLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGN 112 (259)
T ss_pred HHHHHHHHHHHh-cchhhccccccccccceEEeeeCCCCHHHHHHHhhh
Confidence 357888999876 432 456899999999998887655444
No 56
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=60.63 E-value=15 Score=34.34 Aligned_cols=32 Identities=25% Similarity=0.173 Sum_probs=22.5
Q ss_pred HHHHHHHHHHcCCCCcCeEEEeecChhHHHHHHhH
Q 022081 59 WEALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHC 93 (303)
Q Consensus 59 ~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~ 93 (303)
+.+++++|.+.+ .++|+|.|.|.||.=++..+
T Consensus 86 v~~ai~~L~~~~---~~~v~LvG~SmGG~vAl~~A 117 (266)
T TIGR03101 86 VAAAYRWLIEQG---HPPVTLWGLRLGALLALDAA 117 (266)
T ss_pred HHHHHHHHHhcC---CCCEEEEEECHHHHHHHHHH
Confidence 345566665432 56899999999998776543
No 57
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=60.03 E-value=4.3 Score=39.03 Aligned_cols=118 Identities=19% Similarity=0.204 Sum_probs=57.6
Q ss_pred CceEEEehH-HHHHHHHHHHHHcCCC--CcCeEEEeecChhHHHHHHhHHHHHHhCCCCcEEEEeecCccccCCCCC---
Q 022081 48 GTNLFFRGQ-LIWEALMDELLSVGMS--NAKQAFLTGCSAGGLAAVIHCDDFRERLPQHATVKCLADASFFLDESDV--- 121 (303)
Q Consensus 48 ~~~l~frG~-~i~~avl~~L~~~g~~--~a~~v~lsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~fld~~~~--- 121 (303)
..+.|||+- ......++.|.+ ++ ++++|.++|.|-||.=|++-+ .|.+.++ .++++--|+=|.+..
T Consensus 147 ~e~~yyr~~~~D~~ravd~l~s--lpevD~~rI~v~G~SqGG~lal~~a-----aLd~rv~-~~~~~vP~l~d~~~~~~~ 218 (320)
T PF05448_consen 147 PEDYYYRRVYLDAVRAVDFLRS--LPEVDGKRIGVTGGSQGGGLALAAA-----ALDPRVK-AAAADVPFLCDFRRALEL 218 (320)
T ss_dssp TTT-HHHHHHHHHHHHHHHHHT--STTEEEEEEEEEEETHHHHHHHHHH-----HHSST-S-EEEEESESSSSHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHh--CCCcCcceEEEEeecCchHHHHHHH-----HhCcccc-EEEecCCCccchhhhhhc
Confidence 456788874 233333566653 66 578999999999997665543 2332222 244555555443221
Q ss_pred ----ccchhhHHHhhhhhhhccccccCCcchhcccCCCccCCchHHhhcCCCCeeeeccchhH
Q 022081 122 ----QGNRTMRSFYDDVFHLQGVAKSLDRNCLSRMGNSRCLFPREFIKNIRTPVFIVNPAYDF 180 (303)
Q Consensus 122 ----~g~~~~~~~~~~~~~~~~~~~~lp~~C~~~~~~~~C~f~~~~~~~i~tP~Filns~YD~ 180 (303)
.+-..++.+++.. ...++.-.+.++...=|=..+..+.|+.|+++--++.|.
T Consensus 219 ~~~~~~y~~~~~~~~~~-------d~~~~~~~~v~~~L~Y~D~~nfA~ri~~pvl~~~gl~D~ 274 (320)
T PF05448_consen 219 RADEGPYPEIRRYFRWR-------DPHHEREPEVFETLSYFDAVNFARRIKCPVLFSVGLQDP 274 (320)
T ss_dssp T--STTTHHHHHHHHHH-------SCTHCHHHHHHHHHHTT-HHHHGGG--SEEEEEEETT-S
T ss_pred CCccccHHHHHHHHhcc-------CCCcccHHHHHHHHhhhhHHHHHHHcCCCEEEEEecCCC
Confidence 1111222222210 011111111111111233467889999999999999993
No 58
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=59.99 E-value=13 Score=34.96 Aligned_cols=93 Identities=28% Similarity=0.343 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHcCCCCcCeEEEeecChhHHHHHHhHHHHHHhCCCCcEEEEeecCccccCCCCCccchhhHHHhhhhh
Q 022081 56 QLIWEALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHCDDFRERLPQHATVKCLADASFFLDESDVQGNRTMRSFYDDVF 135 (303)
Q Consensus 56 ~~i~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~fld~~~~~g~~~~~~~~~~~~ 135 (303)
+.-++||.++|.+. .++.++|+|-|.|.|..-++ +++.+.| -+-|.+ .|. | .+| ++..+..
T Consensus 112 y~Di~avye~Lr~~-~g~~~~Iil~G~SiGt~~tv----~Lasr~~-~~alVL--~SP-f-----~S~---~rv~~~~-- 172 (258)
T KOG1552|consen 112 YADIKAVYEWLRNR-YGSPERIILYGQSIGTVPTV----DLASRYP-LAAVVL--HSP-F-----TSG---MRVAFPD-- 172 (258)
T ss_pred hhhHHHHHHHHHhh-cCCCceEEEEEecCCchhhh----hHhhcCC-cceEEE--ecc-c-----hhh---hhhhccC--
Confidence 35789999999973 33889999999999986533 4455555 222222 221 2 222 2222221
Q ss_pred hhccccccCCcchhcccCCCccCCc-hHHhhcCCCCeeeeccchhHH
Q 022081 136 HLQGVAKSLDRNCLSRMGNSRCLFP-REFIKNIRTPVFIVNPAYDFW 181 (303)
Q Consensus 136 ~~~~~~~~lp~~C~~~~~~~~C~f~-~~~~~~i~tP~Filns~YD~w 181 (303)
+... .|--.|+ ..-++.|+.|+.|+++.=|..
T Consensus 173 -------------~~~~-~~~d~f~~i~kI~~i~~PVLiiHgtdDev 205 (258)
T KOG1552|consen 173 -------------TKTT-YCFDAFPNIEKISKITCPVLIIHGTDDEV 205 (258)
T ss_pred -------------cceE-EeeccccccCcceeccCCEEEEecccCce
Confidence 1111 1111233 567888999999999988854
No 59
>PLN00021 chlorophyllase
Probab=59.84 E-value=14 Score=35.37 Aligned_cols=39 Identities=23% Similarity=0.105 Sum_probs=26.5
Q ss_pred HHHHHHHHHHc---C-----CCCcCeEEEeecChhHHHHHHhHHHHH
Q 022081 59 WEALMDELLSV---G-----MSNAKQAFLTGCSAGGLAAVIHCDDFR 97 (303)
Q Consensus 59 ~~avl~~L~~~---g-----~~~a~~v~lsG~SAGG~g~~~~~d~~~ 97 (303)
..++++||... - -.+.+++.|.|.|+||..++.-+-...
T Consensus 102 ~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~ 148 (313)
T PLN00021 102 AAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKA 148 (313)
T ss_pred HHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhcc
Confidence 45566666641 1 134578999999999998877664433
No 60
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=58.98 E-value=14 Score=32.46 Aligned_cols=36 Identities=19% Similarity=0.128 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHcCCCCcCeEEEeecChhHHHHHHh
Q 022081 57 LIWEALMDELLSVGMSNAKQAFLTGCSAGGLAAVIH 92 (303)
Q Consensus 57 ~i~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~ 92 (303)
..+++++++|.+..-...++|.+.|.|.||.-++.-
T Consensus 80 ~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~ 115 (218)
T PF01738_consen 80 ADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLL 115 (218)
T ss_dssp HHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhh
Confidence 455677888876443478999999999999887753
No 61
>PLN02324 triacylglycerol lipase
Probab=57.84 E-value=40 Score=33.91 Aligned_cols=36 Identities=25% Similarity=0.313 Sum_probs=25.8
Q ss_pred HHHHHHcCCCCc-CeEEEeecChhHHHHHHhHHHHHHh
Q 022081 63 MDELLSVGMSNA-KQAFLTGCSAGGLAAVIHCDDFRER 99 (303)
Q Consensus 63 l~~L~~~g~~~a-~~v~lsG~SAGG~g~~~~~d~~~~~ 99 (303)
|.+|+. .+++. .+|++||+|-||--|.|.+-++...
T Consensus 203 V~~L~~-~Yp~e~~sItvTGHSLGGALAtLaA~dl~~~ 239 (415)
T PLN02324 203 LKRLLE-LYKNEEISITFTGHSLGAVMSVLSAADLVYG 239 (415)
T ss_pred HHHHHH-HCCCCCceEEEecCcHHHHHHHHHHHHHHHh
Confidence 334443 34554 3799999999998888888777653
No 62
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=57.18 E-value=16 Score=37.08 Aligned_cols=35 Identities=17% Similarity=0.097 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHc--CC-CCcCeEEEeecChhHHHHHHh
Q 022081 58 IWEALMDELLSV--GM-SNAKQAFLTGCSAGGLAAVIH 92 (303)
Q Consensus 58 i~~avl~~L~~~--g~-~~a~~v~lsG~SAGG~g~~~~ 92 (303)
-..++|+|+... .| +++++|.|.|.||||..+-++
T Consensus 175 Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l 212 (545)
T KOG1516|consen 175 DQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLL 212 (545)
T ss_pred HHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHH
Confidence 345667777762 34 589999999999999887544
No 63
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=56.98 E-value=9.6 Score=40.26 Aligned_cols=34 Identities=26% Similarity=0.294 Sum_probs=30.2
Q ss_pred hHHHHHHHHHHHHHcCCCCcCeEEEeecChhHHH
Q 022081 55 GQLIWEALMDELLSVGMSNAKQAFLTGCSAGGLA 88 (303)
Q Consensus 55 G~~i~~avl~~L~~~g~~~a~~v~lsG~SAGG~g 88 (303)
+..-+.+..++|.++|+..++++-+.|.||||+=
T Consensus 529 ~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlL 562 (712)
T KOG2237|consen 529 SFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLL 562 (712)
T ss_pred cHHHHHHHHHHHHHcCCCCccceeEecccCccch
Confidence 3446888999999999999999999999999974
No 64
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=56.67 E-value=31 Score=31.72 Aligned_cols=24 Identities=29% Similarity=0.508 Sum_probs=18.6
Q ss_pred CCCcCeEEEeecChhHHHHHHhHH
Q 022081 71 MSNAKQAFLTGCSAGGLAAVIHCD 94 (303)
Q Consensus 71 ~~~a~~v~lsG~SAGG~g~~~~~d 94 (303)
+...++++|.|.|.||+-+...+.
T Consensus 83 l~~~~~v~lvGhS~GG~v~~~~a~ 106 (273)
T PLN02211 83 LPENEKVILVGHSAGGLSVTQAIH 106 (273)
T ss_pred cCCCCCEEEEEECchHHHHHHHHH
Confidence 434589999999999997666653
No 65
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=56.65 E-value=12 Score=35.40 Aligned_cols=56 Identities=25% Similarity=0.225 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHcCCCCcCeEEEeecChhHHHHHHhHHHHHH--hCCCCcEEEEeecCccc
Q 022081 56 QLIWEALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHCDDFRE--RLPQHATVKCLADASFF 115 (303)
Q Consensus 56 ~~i~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~d~~~~--~lp~~~~v~~l~DsG~f 115 (303)
..=++.+|.+|..+ -+-+++=+.|+|+||+|...+.-.... .+|+ .+ +.++=+|.|
T Consensus 119 s~wlk~~msyL~~~--Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~-ln-K~V~l~gpf 176 (288)
T COG4814 119 SKWLKKAMSYLQKH--YNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPP-LN-KLVSLAGPF 176 (288)
T ss_pred HHHHHHHHHHHHHh--cCCceeeeeeeccccHHHHHHHHHhcCCCCCcc-hh-heEEecccc
Confidence 34578899999872 234456688999999998877766653 4773 32 334444555
No 66
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=56.21 E-value=14 Score=31.90 Aligned_cols=30 Identities=23% Similarity=0.399 Sum_probs=21.1
Q ss_pred HHHHHHHHcCCCCcCeEEEeecChhHHHHHHhH
Q 022081 61 ALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHC 93 (303)
Q Consensus 61 avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~ 93 (303)
.|++.|.++|+.- =+++|.||||+=+.+.+
T Consensus 16 Gvl~~L~e~~~~~---d~i~GtSaGai~aa~~a 45 (194)
T cd07207 16 GALKALEEAGILK---KRVAGTSAGAITAALLA 45 (194)
T ss_pred HHHHHHHHcCCCc---ceEEEECHHHHHHHHHH
Confidence 4666676666542 68999999998665444
No 67
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=55.87 E-value=37 Score=31.10 Aligned_cols=55 Identities=11% Similarity=0.125 Sum_probs=39.2
Q ss_pred ehHHHHHHHHHHHHHcCCCCcCeEEEeecChhHHHHHHhHHHHHHhCC---CCcEEEEeecC
Q 022081 54 RGQLIWEALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHCDDFRERLP---QHATVKCLADA 112 (303)
Q Consensus 54 rG~~i~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~d~~~~~lp---~~~~v~~l~Ds 112 (303)
.|..++.+.|+... ...+.|++.|.|.|+.-+-....++.+.-. ...++..+.|-
T Consensus 31 ~G~~~L~~ai~~~~----~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~fVl~gnP 88 (225)
T PF08237_consen 31 EGVANLDAAIRAAI----AAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLSFVLIGNP 88 (225)
T ss_pred HHHHHHHHHHHhhc----cCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceEEEEecCC
Confidence 46677777776533 366789999999999999888888887432 24456666654
No 68
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=55.66 E-value=25 Score=29.60 Aligned_cols=22 Identities=32% Similarity=0.386 Sum_probs=17.8
Q ss_pred cCeEEEeecChhHHHHHHhHHH
Q 022081 74 AKQAFLTGCSAGGLAAVIHCDD 95 (303)
Q Consensus 74 a~~v~lsG~SAGG~g~~~~~d~ 95 (303)
.++++|.|.|+||.-++..+..
T Consensus 69 ~~~~~l~G~S~Gg~ia~~~a~~ 90 (251)
T TIGR03695 69 IEPFFLVGYSMGGRIALYYALQ 90 (251)
T ss_pred CCeEEEEEeccHHHHHHHHHHh
Confidence 4689999999999877766554
No 69
>PLN02965 Probable pheophorbidase
Probab=55.33 E-value=29 Score=31.01 Aligned_cols=38 Identities=16% Similarity=0.240 Sum_probs=23.0
Q ss_pred CCCcCeEEEeecChhHHHHHHhHHHHHHhCCCCcEEEEeecC
Q 022081 71 MSNAKQAFLTGCSAGGLAAVIHCDDFRERLPQHATVKCLADA 112 (303)
Q Consensus 71 ~~~a~~v~lsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~Ds 112 (303)
++..++++|.|+|.||.=++..+ ...|..++-.++.++
T Consensus 68 l~~~~~~~lvGhSmGG~ia~~~a----~~~p~~v~~lvl~~~ 105 (255)
T PLN02965 68 LPPDHKVILVGHSIGGGSVTEAL----CKFTDKISMAIYVAA 105 (255)
T ss_pred cCCCCCEEEEecCcchHHHHHHH----HhCchheeEEEEEcc
Confidence 43336899999999997554433 244544443444444
No 70
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=54.91 E-value=18 Score=33.03 Aligned_cols=39 Identities=21% Similarity=0.187 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHcCCCCcCeEEEeecChhHHHHHHhHHH
Q 022081 57 LIWEALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHCDD 95 (303)
Q Consensus 57 ~i~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~d~ 95 (303)
.-+.+++++|.+....++++|.++|.|.||.=|++....
T Consensus 94 ~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~ 132 (236)
T COG0412 94 ADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATR 132 (236)
T ss_pred HHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcc
Confidence 357788999987555788999999999999877765543
No 71
>PRK10673 acyl-CoA esterase; Provisional
Probab=54.88 E-value=29 Score=30.47 Aligned_cols=36 Identities=22% Similarity=0.227 Sum_probs=22.5
Q ss_pred cCeEEEeecChhHHHHHHhHHHHHHhCCCCcEEEEeecCc
Q 022081 74 AKQAFLTGCSAGGLAAVIHCDDFRERLPQHATVKCLADAS 113 (303)
Q Consensus 74 a~~v~lsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG 113 (303)
.+++.|.|+|.||.-++..+.. .|..++-.++.|++
T Consensus 80 ~~~~~lvGhS~Gg~va~~~a~~----~~~~v~~lvli~~~ 115 (255)
T PRK10673 80 IEKATFIGHSMGGKAVMALTAL----APDRIDKLVAIDIA 115 (255)
T ss_pred CCceEEEEECHHHHHHHHHHHh----CHhhcceEEEEecC
Confidence 3569999999999877655433 44333334444444
No 72
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=54.69 E-value=32 Score=35.59 Aligned_cols=40 Identities=25% Similarity=0.235 Sum_probs=30.5
Q ss_pred ehHHHHHHHHHHHHHc--CC-CCcCeEEEeecChhHHHHHHhH
Q 022081 54 RGQLIWEALMDELLSV--GM-SNAKQAFLTGCSAGGLAAVIHC 93 (303)
Q Consensus 54 rG~~i~~avl~~L~~~--g~-~~a~~v~lsG~SAGG~g~~~~~ 93 (303)
+|-.--+-+|.|+.+. -| +++++|-|.|.|||+-.+.+|.
T Consensus 194 mGl~DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aHL 236 (601)
T KOG4389|consen 194 MGLLDQQLALQWVQENIAAFGGNPSRVTLFGESAGAASVVAHL 236 (601)
T ss_pred cchHHHHHHHHHHHHhHHHhCCCcceEEEeccccchhhhhhee
Confidence 4666667778888762 34 5899999999999998776663
No 73
>PRK10349 carboxylesterase BioH; Provisional
Probab=54.33 E-value=32 Score=30.50 Aligned_cols=48 Identities=21% Similarity=0.265 Sum_probs=29.4
Q ss_pred HHHHHHHHHHcCCCCcCeEEEeecChhHHHHHHhHHHHHHhCCCCcEEEEeecCc
Q 022081 59 WEALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHCDDFRERLPQHATVKCLADAS 113 (303)
Q Consensus 59 ~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG 113 (303)
++.+.+++...+ .+++.|.|.|.||.-++..+- ..|..++-.++.++.
T Consensus 61 ~~~~~~~l~~~~---~~~~~lvGhS~Gg~ia~~~a~----~~p~~v~~lili~~~ 108 (256)
T PRK10349 61 LADMAEAVLQQA---PDKAIWLGWSLGGLVASQIAL----THPERVQALVTVASS 108 (256)
T ss_pred HHHHHHHHHhcC---CCCeEEEEECHHHHHHHHHHH----hChHhhheEEEecCc
Confidence 455566666533 368899999999987775443 344333334445553
No 74
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=53.47 E-value=30 Score=34.13 Aligned_cols=54 Identities=24% Similarity=0.260 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHcC-CCCcCeEEEeecChhHHHHHHhHHHHHHh-CC--CCcEEEEeecCcc
Q 022081 58 IWEALMDELLSVG-MSNAKQAFLTGCSAGGLAAVIHCDDFRER-LP--QHATVKCLADASF 114 (303)
Q Consensus 58 i~~avl~~L~~~g-~~~a~~v~lsG~SAGG~g~~~~~d~~~~~-lp--~~~~v~~l~DsG~ 114 (303)
-.+|++++|.++. =.+|+++++-|.|-||.=+ +..+++. +. .+++..++.|-||
T Consensus 197 ~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vq---a~AL~~~~~~~~dgi~~~~ikDRsf 254 (365)
T PF05677_consen 197 DYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQ---AEALKKEVLKGSDGIRWFLIKDRSF 254 (365)
T ss_pred HHHHHHHHHHhcccCCChheEEEeeccccHHHH---HHHHHhcccccCCCeeEEEEecCCc
Confidence 4567788888643 3589999999999998532 2344442 22 1577778888875
No 75
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=53.15 E-value=33 Score=34.76 Aligned_cols=55 Identities=15% Similarity=0.075 Sum_probs=35.2
Q ss_pred HHHHHHHHHHH-cCCCCcCeEEEeecChhHHHHHHhHHHHHHhCCCCc-EEEEeecCccccC
Q 022081 58 IWEALMDELLS-VGMSNAKQAFLTGCSAGGLAAVIHCDDFRERLPQHA-TVKCLADASFFLD 117 (303)
Q Consensus 58 i~~avl~~L~~-~g~~~a~~v~lsG~SAGG~g~~~~~d~~~~~lp~~~-~v~~l~DsG~fld 117 (303)
.+.++|++|.. .++ ..++|.|.|.|.||.-+..-. .++|..+ ++.+|.=+|.++.
T Consensus 102 ~la~lI~~L~~~~gl-~l~~VhLIGHSLGAhIAg~ag----~~~p~rV~rItgLDPAgP~F~ 158 (442)
T TIGR03230 102 DVAKFVNWMQEEFNY-PWDNVHLLGYSLGAHVAGIAG----SLTKHKVNRITGLDPAGPTFE 158 (442)
T ss_pred HHHHHHHHHHHhhCC-CCCcEEEEEECHHHHHHHHHH----HhCCcceeEEEEEcCCCCccc
Confidence 45566777764 243 568899999999998776644 3444322 4555555676554
No 76
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=51.69 E-value=17 Score=33.85 Aligned_cols=31 Identities=29% Similarity=0.228 Sum_probs=19.8
Q ss_pred HHHHHHHcCCC-CcCeEEEeecChhHHHHHHh
Q 022081 62 LMDELLSVGMS-NAKQAFLTGCSAGGLAAVIH 92 (303)
Q Consensus 62 vl~~L~~~g~~-~a~~v~lsG~SAGG~g~~~~ 92 (303)
|++.|+++|.. -.+--.++|+|||++.+...
T Consensus 22 Vl~~L~e~g~~l~~~~~~i~G~SAGAl~aa~~ 53 (249)
T cd07220 22 VASCLLEHAPFLVANARKIYGASAGALTATAL 53 (249)
T ss_pred HHHHHHhcCCcccccCCeEEEEcHHHHHHHHH
Confidence 46666665532 11134678999999987753
No 77
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=51.02 E-value=25 Score=30.25 Aligned_cols=21 Identities=19% Similarity=0.289 Sum_probs=16.8
Q ss_pred cCeEEEeecChhHHHHHHhHH
Q 022081 74 AKQAFLTGCSAGGLAAVIHCD 94 (303)
Q Consensus 74 a~~v~lsG~SAGG~g~~~~~d 94 (303)
.++++|.|.|.||.-++..+.
T Consensus 79 ~~~~~l~G~S~Gg~~a~~~a~ 99 (257)
T TIGR03611 79 IERFHFVGHALGGLIGLQLAL 99 (257)
T ss_pred CCcEEEEEechhHHHHHHHHH
Confidence 467999999999987766544
No 78
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=50.92 E-value=27 Score=31.63 Aligned_cols=21 Identities=29% Similarity=0.167 Sum_probs=16.1
Q ss_pred cCeEEEeecChhHHHHHHhHH
Q 022081 74 AKQAFLTGCSAGGLAAVIHCD 94 (303)
Q Consensus 74 a~~v~lsG~SAGG~g~~~~~d 94 (303)
.++++|.|.|.||.=++.-+-
T Consensus 90 ~~~~~LvG~S~GG~va~~~a~ 110 (276)
T TIGR02240 90 YGQVNAIGVSWGGALAQQFAH 110 (276)
T ss_pred cCceEEEEECHHHHHHHHHHH
Confidence 457999999999987664443
No 79
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=50.55 E-value=16 Score=35.16 Aligned_cols=32 Identities=28% Similarity=0.396 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHcCCCCcCeEEEeecChhHHHH
Q 022081 58 IWEALMDELLSVGMSNAKQAFLTGCSAGGLAA 89 (303)
Q Consensus 58 i~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~ 89 (303)
-++++++.|+.+.=-++.+|.++|-|+||.=+
T Consensus 127 flr~lva~l~~~~gidp~RVyvtGlS~GG~Ma 158 (312)
T COG3509 127 FLRALVAKLVNEYGIDPARVYVTGLSNGGRMA 158 (312)
T ss_pred HHHHHHHHHHHhcCcCcceEEEEeeCcHHHHH
Confidence 46777888876533467899999999999543
No 80
>PRK04940 hypothetical protein; Provisional
Probab=49.55 E-value=34 Score=30.49 Aligned_cols=23 Identities=13% Similarity=0.270 Sum_probs=19.3
Q ss_pred CeEEEeecChhHHHHHHhHHHHHHhCC
Q 022081 75 KQAFLTGCSAGGLAAVIHCDDFRERLP 101 (303)
Q Consensus 75 ~~v~lsG~SAGG~g~~~~~d~~~~~lp 101 (303)
+.++|.|+|-|| +++-++..++.
T Consensus 60 ~~~~liGSSLGG----yyA~~La~~~g 82 (180)
T PRK04940 60 ERPLICGVGLGG----YWAERIGFLCG 82 (180)
T ss_pred CCcEEEEeChHH----HHHHHHHHHHC
Confidence 579999999999 57778888875
No 81
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=49.53 E-value=52 Score=31.81 Aligned_cols=53 Identities=21% Similarity=0.210 Sum_probs=34.4
Q ss_pred HHHHHHHHHHcCCCCcCeEEEeecChhHHHHHHhHHHHHHhCC-CCcEEEEeecCc
Q 022081 59 WEALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHCDDFRERLP-QHATVKCLADAS 113 (303)
Q Consensus 59 ~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~d~~~~~lp-~~~~v~~l~DsG 113 (303)
+++.++.|+. -++ --+|++||+|.||-=|.+-+.++...-. ...+|+++.=++
T Consensus 157 ~~~~~~~L~~-~~~-~~~i~vTGHSLGgAlA~laa~~i~~~~~~~~~~v~v~tFG~ 210 (336)
T KOG4569|consen 157 LDAELRRLIE-LYP-NYSIWVTGHSLGGALASLAALDLVKNGLKTSSPVKVYTFGQ 210 (336)
T ss_pred HHHHHHHHHH-hcC-CcEEEEecCChHHHHHHHHHHHHHHcCCCCCCceEEEEecC
Confidence 3455555554 234 4579999999999777777777766543 234566665544
No 82
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=49.13 E-value=23 Score=36.25 Aligned_cols=37 Identities=11% Similarity=-0.007 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHcCCCCcCeEEEeecChhHHHHHHhH
Q 022081 56 QLIWEALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHC 93 (303)
Q Consensus 56 ~~i~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~ 93 (303)
..-+.++|++|..+...+ .+|.+.|.|.||.-+++-+
T Consensus 79 ~~D~~~~i~~l~~q~~~~-~~v~~~G~S~GG~~a~~~a 115 (550)
T TIGR00976 79 AADGYDLVDWIAKQPWCD-GNVGMLGVSYLAVTQLLAA 115 (550)
T ss_pred chHHHHHHHHHHhCCCCC-CcEEEEEeChHHHHHHHHh
Confidence 346678899998754444 6899999999997665543
No 83
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=48.96 E-value=50 Score=32.48 Aligned_cols=40 Identities=25% Similarity=0.296 Sum_probs=24.4
Q ss_pred cCeEEEeecChhHHHHHHhHHHHHHhCCCCc-EEEEeecCccccC
Q 022081 74 AKQAFLTGCSAGGLAAVIHCDDFRERLPQHA-TVKCLADASFFLD 117 (303)
Q Consensus 74 a~~v~lsG~SAGG~g~~~~~d~~~~~lp~~~-~v~~l~DsG~fld 117 (303)
.++++|.|+|.||+-++..+-. .|..+ .+.++.-+|+...
T Consensus 175 ~~~~~lvGhS~GG~la~~~a~~----~p~~v~~lvl~~p~~~~~~ 215 (402)
T PLN02894 175 LSNFILLGHSFGGYVAAKYALK----HPEHVQHLILVGPAGFSSE 215 (402)
T ss_pred CCCeEEEEECHHHHHHHHHHHh----CchhhcEEEEECCccccCC
Confidence 3579999999999887765533 34222 2344444555443
No 84
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=48.75 E-value=43 Score=29.50 Aligned_cols=35 Identities=20% Similarity=0.074 Sum_probs=22.1
Q ss_pred cCeEEEeecChhHHHHHHhHHHHHHhCCCCcEEEEeecC
Q 022081 74 AKQAFLTGCSAGGLAAVIHCDDFRERLPQHATVKCLADA 112 (303)
Q Consensus 74 a~~v~lsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~Ds 112 (303)
.++++|.|.|.||.-++..+ ...|..++..++.++
T Consensus 94 ~~~~~lvG~S~Gg~~a~~~a----~~~p~~v~~~v~~~~ 128 (278)
T TIGR03056 94 LSPDGVIGHSAGAAIALRLA----LDGPVTPRMVVGINA 128 (278)
T ss_pred CCCceEEEECccHHHHHHHH----HhCCcccceEEEEcC
Confidence 36789999999998777554 345533333333343
No 85
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=48.47 E-value=21 Score=35.78 Aligned_cols=29 Identities=28% Similarity=0.654 Sum_probs=21.3
Q ss_pred HHHHHHHcCCCCcCeEEEeecChhHHHHHHhH
Q 022081 62 LMDELLSVGMSNAKQAFLTGCSAGGLAAVIHC 93 (303)
Q Consensus 62 vl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~ 93 (303)
|++.|.++|+.- + +++|+|||++-+.+.+
T Consensus 91 VLkaL~E~gl~p-~--vIsGTSaGAivAal~a 119 (421)
T cd07230 91 VLKALFEANLLP-R--IISGSSAGSIVAAILC 119 (421)
T ss_pred HHHHHHHcCCCC-C--EEEEECHHHHHHHHHH
Confidence 566676677742 2 7999999998776655
No 86
>PLN00413 triacylglycerol lipase
Probab=47.77 E-value=31 Score=35.35 Aligned_cols=35 Identities=20% Similarity=0.325 Sum_probs=24.4
Q ss_pred HHHHHHHcCCCCcCeEEEeecChhHHHHHHhHHHHHH
Q 022081 62 LMDELLSVGMSNAKQAFLTGCSAGGLAAVIHCDDFRE 98 (303)
Q Consensus 62 vl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~d~~~~ 98 (303)
.+++++. ..+++ +|+++|+|.||-=|.+.+..++.
T Consensus 273 ~Lk~ll~-~~p~~-kliVTGHSLGGALAtLaA~~L~~ 307 (479)
T PLN00413 273 HLKEIFD-QNPTS-KFILSGHSLGGALAILFTAVLIM 307 (479)
T ss_pred HHHHHHH-HCCCC-eEEEEecCHHHHHHHHHHHHHHh
Confidence 3444443 24433 69999999999888888877664
No 87
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=47.39 E-value=17 Score=35.88 Aligned_cols=17 Identities=35% Similarity=0.413 Sum_probs=15.1
Q ss_pred cCeEEEeecChhHHHHH
Q 022081 74 AKQAFLTGCSAGGLAAV 90 (303)
Q Consensus 74 a~~v~lsG~SAGG~g~~ 90 (303)
-++|.++|+|-||-.++
T Consensus 227 ~~~i~~~GHSFGGATa~ 243 (379)
T PF03403_consen 227 LSRIGLAGHSFGGATAL 243 (379)
T ss_dssp EEEEEEEEETHHHHHHH
T ss_pred hhheeeeecCchHHHHH
Confidence 56899999999998877
No 88
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=47.31 E-value=41 Score=28.34 Aligned_cols=51 Identities=18% Similarity=0.176 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHcCCCCcCeEEEeecChhHHHHHHhHHHHHHhCCCCcEEEEeecCccc
Q 022081 58 IWEALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHCDDFRERLPQHATVKCLADASFF 115 (303)
Q Consensus 58 i~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~f 115 (303)
.++.+.+++... +. +++.|.|.|.||.-++.-+. ..|..++-.++.+++..
T Consensus 51 ~~~~~~~~~~~~-~~--~~~~lvG~S~Gg~~a~~~a~----~~p~~v~~~il~~~~~~ 101 (245)
T TIGR01738 51 SLADAAEAIAAQ-AP--DPAIWLGWSLGGLVALHIAA----THPDRVRALVTVASSPC 101 (245)
T ss_pred CHHHHHHHHHHh-CC--CCeEEEEEcHHHHHHHHHHH----HCHHhhheeeEecCCcc
Confidence 355666666642 22 68999999999987765443 33422333344455443
No 89
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=47.14 E-value=28 Score=29.94 Aligned_cols=28 Identities=21% Similarity=0.427 Sum_probs=19.3
Q ss_pred HHHHHHHcCCCCcCeEEEeecChhHHHHHHh
Q 022081 62 LMDELLSVGMSNAKQAFLTGCSAGGLAAVIH 92 (303)
Q Consensus 62 vl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~ 92 (303)
+++.|.+.|+. -=+++|.|||++-+.+.
T Consensus 18 vl~~L~e~g~~---~d~i~GtSaGAi~aa~~ 45 (175)
T cd07228 18 VLRALEEEGIE---IDIIAGSSIGALVGALY 45 (175)
T ss_pred HHHHHHHCCCC---eeEEEEeCHHHHHHHHH
Confidence 56666666653 35899999999854443
No 90
>PLN02719 triacylglycerol lipase
Probab=47.11 E-value=40 Score=34.88 Aligned_cols=26 Identities=35% Similarity=0.369 Sum_probs=22.9
Q ss_pred cCeEEEeecChhHHHHHHhHHHHHHh
Q 022081 74 AKQAFLTGCSAGGLAAVIHCDDFRER 99 (303)
Q Consensus 74 a~~v~lsG~SAGG~g~~~~~d~~~~~ 99 (303)
..+|+++|+|.||-=|.|.+.+++..
T Consensus 297 ~~sItVTGHSLGGALAtLaA~Dl~~~ 322 (518)
T PLN02719 297 ELSITVTGHSLGGALAVLSAYDVAEM 322 (518)
T ss_pred cceEEEecCcHHHHHHHHHHHHHHHh
Confidence 35899999999999999999888875
No 91
>PLN02571 triacylglycerol lipase
Probab=47.05 E-value=41 Score=33.83 Aligned_cols=40 Identities=15% Similarity=0.243 Sum_probs=27.4
Q ss_pred HHHHHHHHH--cCCCCcC-eEEEeecChhHHHHHHhHHHHHHh
Q 022081 60 EALMDELLS--VGMSNAK-QAFLTGCSAGGLAAVIHCDDFRER 99 (303)
Q Consensus 60 ~avl~~L~~--~g~~~a~-~v~lsG~SAGG~g~~~~~d~~~~~ 99 (303)
+.+++++.+ +.+++.+ .|+++|+|-||.=|.|.+-.++..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~dl~~~ 250 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVDIVAN 250 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHHHHHh
Confidence 345555443 1344433 699999999998888888887753
No 92
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=46.96 E-value=81 Score=28.19 Aligned_cols=46 Identities=15% Similarity=0.315 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHc--CCCCcCeEEEeecChhHHHH---HHhHHHHHHhCCC
Q 022081 57 LIWEALMDELLSV--GMSNAKQAFLTGCSAGGLAA---VIHCDDFRERLPQ 102 (303)
Q Consensus 57 ~i~~avl~~L~~~--g~~~a~~v~lsG~SAGG~g~---~~~~d~~~~~lp~ 102 (303)
.+++.+++.+.+. .....+-++|.-+-+||.|+ .+-.+.+|+.+|.
T Consensus 105 ~~~~~~~~~ir~~~e~~d~~~~~~i~~slgGGTGSG~~~~l~~~l~~~y~~ 155 (216)
T PF00091_consen 105 EALEEILEQIRKEIEKCDSLDGFFIVHSLGGGTGSGLGPVLAEMLREEYPK 155 (216)
T ss_dssp HHHHHHHHHHHHHHHTSTTESEEEEEEESSSSHHHHHHHHHHHHHHHTSTT
T ss_pred ccccccccccchhhccccccccceecccccceeccccccccchhhhccccc
Confidence 3778888877752 44889999999888888774 6678889999984
No 93
>PLN02753 triacylglycerol lipase
Probab=46.95 E-value=38 Score=35.08 Aligned_cols=53 Identities=25% Similarity=0.286 Sum_probs=34.5
Q ss_pred cCeEEEeecChhHHHHHHhHHHHHHh-CCC-----CcEEEEeecCccccCCCCCccchhhHHHhh
Q 022081 74 AKQAFLTGCSAGGLAAVIHCDDFRER-LPQ-----HATVKCLADASFFLDESDVQGNRTMRSFYD 132 (303)
Q Consensus 74 a~~v~lsG~SAGG~g~~~~~d~~~~~-lp~-----~~~v~~l~DsG~fld~~~~~g~~~~~~~~~ 132 (303)
..+|+++|+|-||-=|.|.+.+++.. ++. ...|.++.=++ +-.|+.....+++
T Consensus 311 ~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGs------PRVGN~aFA~~~~ 369 (531)
T PLN02753 311 DLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGG------PRVGNVRFKDRME 369 (531)
T ss_pred CceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCC------CCccCHHHHHHHH
Confidence 46899999999999999999888764 321 23355555443 2335555544443
No 94
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=46.76 E-value=22 Score=33.57 Aligned_cols=30 Identities=23% Similarity=0.413 Sum_probs=21.8
Q ss_pred HHHHHHHcCCCCcCeEEEeecChhHHHHHHhHH
Q 022081 62 LMDELLSVGMSNAKQAFLTGCSAGGLAAVIHCD 94 (303)
Q Consensus 62 vl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~d 94 (303)
|++.|.+.| -+--+++|+|||++-+.+.+.
T Consensus 29 Vl~aL~e~g---i~~~~iaGtS~GAiva~l~A~ 58 (306)
T COG1752 29 VLKALEEAG---IPIDVIAGTSAGAIVAALYAA 58 (306)
T ss_pred HHHHHHHcC---CCccEEEecCHHHHHHHHHHc
Confidence 577777666 345689999999987665554
No 95
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=46.69 E-value=25 Score=31.85 Aligned_cols=30 Identities=27% Similarity=0.557 Sum_probs=21.3
Q ss_pred HHHHHHHHcCCCCcCeEEEeecChhHHHHHHhH
Q 022081 61 ALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHC 93 (303)
Q Consensus 61 avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~ 93 (303)
-|++.|.+.|+. . -.++|.|||++-+.+.+
T Consensus 17 GvL~aL~e~gi~-~--~~i~GtSaGAi~aa~~a 46 (221)
T cd07210 17 GFLAALLEMGLE-P--SAISGTSAGALVGGLFA 46 (221)
T ss_pred HHHHHHHHcCCC-c--eEEEEeCHHHHHHHHHH
Confidence 356666666664 2 36999999999876655
No 96
>KOG3101 consensus Esterase D [General function prediction only]
Probab=46.45 E-value=7.7 Score=35.99 Aligned_cols=36 Identities=19% Similarity=0.338 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHc----CCC-CcCeEEEeecChhHHHHHH
Q 022081 56 QLIWEALMDELLSV----GMS-NAKQAFLTGCSAGGLAAVI 91 (303)
Q Consensus 56 ~~i~~avl~~L~~~----g~~-~a~~v~lsG~SAGG~g~~~ 91 (303)
++...-|.++|.+. .++ ++.++-++|+|+||.||+.
T Consensus 117 yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~ 157 (283)
T KOG3101|consen 117 YRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALT 157 (283)
T ss_pred hhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEE
Confidence 45556666666642 222 4556889999999999865
No 97
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=45.75 E-value=15 Score=30.32 Aligned_cols=17 Identities=35% Similarity=0.579 Sum_probs=13.4
Q ss_pred EEEeecChhHHHHHHhH
Q 022081 77 AFLTGCSAGGLAAVIHC 93 (303)
Q Consensus 77 v~lsG~SAGG~g~~~~~ 93 (303)
-+++|.||||+-+++.+
T Consensus 29 d~i~GtS~Gal~a~~~~ 45 (204)
T PF01734_consen 29 DVISGTSAGALNAALLA 45 (204)
T ss_dssp SEEEEECCHHHHHHHHH
T ss_pred cEEEEcChhhhhHHHHH
Confidence 47999999999885543
No 98
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=45.73 E-value=34 Score=34.52 Aligned_cols=33 Identities=18% Similarity=0.249 Sum_probs=21.8
Q ss_pred HHHHHHHHHHcCCCCcCeEEEeecChhHHHHHHhH
Q 022081 59 WEALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHC 93 (303)
Q Consensus 59 ~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~ 93 (303)
+++.++.+.+ -...++|+|.|+|+||+=+....
T Consensus 148 Lk~lIe~~~~--~~g~~kV~LVGHSMGGlva~~fl 180 (440)
T PLN02733 148 LKKKLETVYK--ASGGKKVNIISHSMGGLLVKCFM 180 (440)
T ss_pred HHHHHHHHHH--HcCCCCEEEEEECHhHHHHHHHH
Confidence 4444444443 12357899999999998877544
No 99
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=45.28 E-value=82 Score=30.23 Aligned_cols=91 Identities=16% Similarity=0.164 Sum_probs=50.0
Q ss_pred CCCCCCc--CceEEEE--ecCCCcccCCCCCcccCCCceEEEehHHHHHHHHHHHHHcCCC--CcCeEEEeecChhHHHH
Q 022081 16 SQNPDFF--SWNKVKI--RYCDGASFAGRPESEFKNGTNLFFRGQLIWEALMDELLSVGMS--NAKQAFLTGCSAGGLAA 89 (303)
Q Consensus 16 ~~NP~f~--nwn~V~v--pYC~Gd~~~G~~~~~~~~~~~l~frG~~i~~avl~~L~~~g~~--~a~~v~lsG~SAGG~g~ 89 (303)
..||+=+ ..|+||| |=-+|-|+.-+.... ..+.---...++++ |...+.+ ++ +...+.|+|.|-||.=+
T Consensus 76 ~~n~~sW~~~an~l~iD~PvGtGfS~~~~~~~~---~~~~~~~a~~~~~f-l~~f~~~-~p~~~~~~~yi~GESYgG~yv 150 (415)
T PF00450_consen 76 EDNPYSWNKFANLLFIDQPVGTGFSYGNDPSDY---VWNDDQAAEDLYEF-LQQFFQK-FPEYRSNPLYIAGESYGGHYV 150 (415)
T ss_dssp EE-TT-GGGTSEEEEE--STTSTT-EESSGGGG---S-SHHHHHHHHHHH-HHHHHHH-SGGGTTSEEEEEEETTHHHHH
T ss_pred cccccccccccceEEEeecCceEEeeccccccc---cchhhHHHHHHHHH-HHHhhhh-hhhccCCCEEEEccccccccc
Confidence 4567211 3578999 445555554433210 00111112223333 3333332 44 34489999999999988
Q ss_pred HHhHHHHHHhCCC----CcEEEEeec
Q 022081 90 VIHCDDFRERLPQ----HATVKCLAD 111 (303)
Q Consensus 90 ~~~~d~~~~~lp~----~~~v~~l~D 111 (303)
..-+.+|.+.-.+ ...++++.=
T Consensus 151 P~~a~~i~~~~~~~~~~~inLkGi~I 176 (415)
T PF00450_consen 151 PALASYILQQNKKGDQPKINLKGIAI 176 (415)
T ss_dssp HHHHHHHHHHTCC--STTSEEEEEEE
T ss_pred hhhHHhhhhcccccccccccccccee
Confidence 8888888877643 467777764
No 100
>PRK00870 haloalkane dehalogenase; Provisional
Probab=45.25 E-value=71 Score=29.28 Aligned_cols=37 Identities=16% Similarity=0.185 Sum_probs=23.5
Q ss_pred cCeEEEeecChhHHHHHHhHHHHHHhCCCCcEEEEeecCcc
Q 022081 74 AKQAFLTGCSAGGLAAVIHCDDFRERLPQHATVKCLADASF 114 (303)
Q Consensus 74 a~~v~lsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~ 114 (303)
.++|+|.|.|.||.=++.-+ ...|..++-.++.+++.
T Consensus 114 ~~~v~lvGhS~Gg~ia~~~a----~~~p~~v~~lvl~~~~~ 150 (302)
T PRK00870 114 LTDVTLVCQDWGGLIGLRLA----AEHPDRFARLVVANTGL 150 (302)
T ss_pred CCCEEEEEEChHHHHHHHHH----HhChhheeEEEEeCCCC
Confidence 35799999999997665443 33454444445556654
No 101
>TIGR03739 PRTRC_D PRTRC system protein D. A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. It is often found on plasmids. This protein family is designated PRTRC system protein D. The gray zone, between trusted and noise, includes proteins found in the same genomes as other proteins of the PRTRC systems, but not in the same contiguous gene region.
Probab=44.97 E-value=43 Score=31.87 Aligned_cols=34 Identities=12% Similarity=0.271 Sum_probs=24.1
Q ss_pred CCcCeEEEeecChhHHHHHHhHHHHHHhCCCCcEEEEeec
Q 022081 72 SNAKQAFLTGCSAGGLAAVIHCDDFRERLPQHATVKCLAD 111 (303)
Q Consensus 72 ~~a~~v~lsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~D 111 (303)
.+.+.|+|+|. |+.+..+++++.+| .+++..+.|
T Consensus 272 ~~~~~Iil~GG-----Ga~ll~~~l~~~f~-~~~i~~~~d 305 (320)
T TIGR03739 272 ESIQNIVLVGG-----GAFLFKKAVKAAFP-KHRIVEVDE 305 (320)
T ss_pred CcccEEEEeCC-----cHHHHHHHHHHHCC-CCeeEecCC
Confidence 35788999874 33466899999999 466655555
No 102
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=44.93 E-value=18 Score=32.39 Aligned_cols=39 Identities=21% Similarity=0.348 Sum_probs=26.9
Q ss_pred eEEEehHHHHHHHHHHHHHcCCCC-cCeEEEeecChhHHHHH
Q 022081 50 NLFFRGQLIWEALMDELLSVGMSN-AKQAFLTGCSAGGLAAV 90 (303)
Q Consensus 50 ~l~frG~~i~~avl~~L~~~g~~~-a~~v~lsG~SAGG~g~~ 90 (303)
++.-.|.+..+.+++.+.. ... ..+|++.|+|.||+=+-
T Consensus 54 gI~~~g~rL~~eI~~~~~~--~~~~~~~IsfIgHSLGGli~r 93 (217)
T PF05057_consen 54 GIDVCGERLAEEILEHIKD--YESKIRKISFIGHSLGGLIAR 93 (217)
T ss_pred hhHHHHHHHHHHHHHhccc--cccccccceEEEecccHHHHH
Confidence 3444677777777776654 222 36899999999998543
No 103
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=44.61 E-value=26 Score=35.20 Aligned_cols=35 Identities=29% Similarity=0.247 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHcCCCCcCeEEEeecChhHHHHH
Q 022081 56 QLIWEALMDELLSVGMSNAKQAFLTGCSAGGLAAV 90 (303)
Q Consensus 56 ~~i~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~ 90 (303)
.+-+++||++|.....-+.++|.+.|-|.||+-++
T Consensus 242 ~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~Av 276 (411)
T PF06500_consen 242 SRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAV 276 (411)
T ss_dssp CHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHH
T ss_pred HHHHHHHHHHHhcCCccChhheEEEEeccchHHHH
Confidence 36789999999874344778999999999997553
No 104
>PLN02847 triacylglycerol lipase
Probab=44.51 E-value=53 Score=34.68 Aligned_cols=35 Identities=26% Similarity=0.270 Sum_probs=23.0
Q ss_pred CeEEEeecChhHHHHHHhHHHHHHh--CCCCcEEEEee
Q 022081 75 KQAFLTGCSAGGLAAVIHCDDFRER--LPQHATVKCLA 110 (303)
Q Consensus 75 ~~v~lsG~SAGG~g~~~~~d~~~~~--lp~~~~v~~l~ 110 (303)
-+|+|+|+|-||-=|.+-.-.+|+. ++ ..+.++++
T Consensus 251 YkLVITGHSLGGGVAALLAilLRe~~~fs-si~CyAFg 287 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYILREQKEFS-STTCVTFA 287 (633)
T ss_pred CeEEEeccChHHHHHHHHHHHHhcCCCCC-CceEEEec
Confidence 3899999999986665556677753 33 34444443
No 105
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=44.23 E-value=66 Score=29.27 Aligned_cols=34 Identities=21% Similarity=0.259 Sum_probs=21.8
Q ss_pred CeEEEeecChhHHHHHHhHHHHHHhCCCCcEEEEeecC
Q 022081 75 KQAFLTGCSAGGLAAVIHCDDFRERLPQHATVKCLADA 112 (303)
Q Consensus 75 ~~v~lsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~Ds 112 (303)
++++|.|.|.||.-++..+- ..|..++-.++.++
T Consensus 102 ~~~~lvGhS~Gg~va~~~a~----~~p~~v~~lili~~ 135 (294)
T PLN02824 102 DPAFVICNSVGGVVGLQAAV----DAPELVRGVMLINI 135 (294)
T ss_pred CCeEEEEeCHHHHHHHHHHH----hChhheeEEEEECC
Confidence 78999999999987765543 34433333344444
No 106
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=43.04 E-value=33 Score=29.11 Aligned_cols=33 Identities=21% Similarity=0.374 Sum_probs=23.5
Q ss_pred HHHHHHHHHcCCCCcCeEEEeecChhHHHHHHhH
Q 022081 60 EALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHC 93 (303)
Q Consensus 60 ~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~ 93 (303)
--|++.|.++++.+ .--.++|.|||++-+...+
T Consensus 14 ~gvl~~l~~~~~~~-~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 14 AGVLSALAERGLLD-CVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHHHHHHhCCcc-CCCEEEEEcHHHHHHHHHh
Confidence 34566666666642 3457899999999888777
No 107
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=42.88 E-value=28 Score=31.16 Aligned_cols=28 Identities=18% Similarity=0.496 Sum_probs=20.1
Q ss_pred HHHHHHHcCCCCcCeEEEeecChhHHHHHHh
Q 022081 62 LMDELLSVGMSNAKQAFLTGCSAGGLAAVIH 92 (303)
Q Consensus 62 vl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~ 92 (303)
|++.|.+.|+ .--+++|.|||++=+.+.
T Consensus 16 vl~aL~e~g~---~~d~i~GtS~GAl~aa~~ 43 (215)
T cd07209 16 VLKALAEAGI---EPDIISGTSIGAINGALI 43 (215)
T ss_pred HHHHHHHcCC---CCCEEEEECHHHHHHHHH
Confidence 5667776666 334899999999865544
No 108
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=42.62 E-value=25 Score=29.69 Aligned_cols=10 Identities=40% Similarity=0.687 Sum_probs=9.2
Q ss_pred EEEeecChhH
Q 022081 77 AFLTGCSAGG 86 (303)
Q Consensus 77 v~lsG~SAGG 86 (303)
+++.|.|||+
T Consensus 70 ~vi~G~SAGA 79 (154)
T PF03575_consen 70 GVIIGTSAGA 79 (154)
T ss_dssp SEEEEETHHH
T ss_pred CEEEEEChHH
Confidence 7889999998
No 109
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=41.80 E-value=39 Score=28.57 Aligned_cols=21 Identities=33% Similarity=0.368 Sum_probs=16.5
Q ss_pred cCeEEEeecChhHHHHHHhHH
Q 022081 74 AKQAFLTGCSAGGLAAVIHCD 94 (303)
Q Consensus 74 a~~v~lsG~SAGG~g~~~~~d 94 (303)
.+++.|.|.|.||.-++..+-
T Consensus 78 ~~~v~liG~S~Gg~~a~~~a~ 98 (251)
T TIGR02427 78 IERAVFCGLSLGGLIAQGLAA 98 (251)
T ss_pred CCceEEEEeCchHHHHHHHHH
Confidence 467999999999987765543
No 110
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=41.58 E-value=29 Score=33.17 Aligned_cols=31 Identities=16% Similarity=0.399 Sum_probs=23.0
Q ss_pred HHHHHHHHcCCCCcCeEEEeecChhHHHHHHhHH
Q 022081 61 ALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHCD 94 (303)
Q Consensus 61 avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~d 94 (303)
-||+.|.++|+. --+++|.|||++=+.+++-
T Consensus 32 GvL~aLee~gi~---~d~v~GtSaGAi~ga~ya~ 62 (306)
T cd07225 32 GVIKALEEAGIP---VDMVGGTSIGAFIGALYAE 62 (306)
T ss_pred HHHHHHHHcCCC---CCEEEEECHHHHHHHHHHc
Confidence 367777777775 3588999999987666553
No 111
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=40.69 E-value=42 Score=31.46 Aligned_cols=38 Identities=26% Similarity=0.269 Sum_probs=23.2
Q ss_pred ehHHHHHHHHHHHHHcCCCCcC-eEEEeecChhHHHHHHh
Q 022081 54 RGQLIWEALMDELLSVGMSNAK-QAFLTGCSAGGLAAVIH 92 (303)
Q Consensus 54 rG~~i~~avl~~L~~~g~~~a~-~v~lsG~SAGG~g~~~~ 92 (303)
|| .+--.+|+.|.+++.+-.+ -=+++|.||||+-+...
T Consensus 13 RG-i~~~~vL~~Le~~~~~~~~~fD~i~GTSaGaiia~~l 51 (288)
T cd07213 13 KG-IVQLVLLKRLAEEFPSFLDQIDLFAGTSAGSLIALGL 51 (288)
T ss_pred HH-HHHHHHHHHHHHhCcccccceeEEEEeCHHHHHHHHH
Confidence 55 3444567777765321112 22899999999876554
No 112
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=40.45 E-value=34 Score=34.17 Aligned_cols=58 Identities=21% Similarity=0.297 Sum_probs=33.5
Q ss_pred EEEehHHHHHH--HHHHHHHcCCCCcCeEEEeecChhHHHHHHhHHHHHHhCCCCcEEEEeecCccc
Q 022081 51 LFFRGQLIWEA--LMDELLSVGMSNAKQAFLTGCSAGGLAAVIHCDDFRERLPQHATVKCLADASFF 115 (303)
Q Consensus 51 l~frG~~i~~a--vl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~f 115 (303)
..+-|...++. ++|+|.+...-++++|-++|.|.||+=+++ ...|. -+|++.+=+||+
T Consensus 200 ~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~-----LaALD--dRIka~v~~~~l 259 (390)
T PF12715_consen 200 RSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWW-----LAALD--DRIKATVANGYL 259 (390)
T ss_dssp --HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHH-----HHHH---TT--EEEEES-B
T ss_pred cCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHH-----HHHcc--hhhHhHhhhhhh
Confidence 34445555543 477776544446899999999999976554 33443 345666656665
No 113
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=40.07 E-value=32 Score=31.54 Aligned_cols=30 Identities=30% Similarity=0.503 Sum_probs=21.0
Q ss_pred HHHHHHHHcCCCCcCeEEEeecChhHHHHHHh
Q 022081 61 ALMDELLSVGMSNAKQAFLTGCSAGGLAAVIH 92 (303)
Q Consensus 61 avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~ 92 (303)
-||+.|.+.|+. +-=+++|.|||++=+.+.
T Consensus 15 Gvl~al~e~~~~--~fd~i~GtSaGAi~a~~~ 44 (266)
T cd07208 15 GVLDAFLEAGIR--PFDLVIGVSAGALNAASY 44 (266)
T ss_pred HHHHHHHHcCCC--CCCEEEEECHHHHhHHHH
Confidence 456777766765 233789999999876543
No 114
>PRK10279 hypothetical protein; Provisional
Probab=39.59 E-value=33 Score=32.79 Aligned_cols=29 Identities=28% Similarity=0.588 Sum_probs=22.1
Q ss_pred HHHHHHHcCCCCcCeEEEeecChhHHHHHHhH
Q 022081 62 LMDELLSVGMSNAKQAFLTGCSAGGLAAVIHC 93 (303)
Q Consensus 62 vl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~ 93 (303)
||+.|.+.|++ --+++|+|||++=+.+.+
T Consensus 23 VL~aL~E~gi~---~d~i~GtS~GAlvga~yA 51 (300)
T PRK10279 23 VINALKKVGIE---IDIVAGCSIGSLVGAAYA 51 (300)
T ss_pred HHHHHHHcCCC---cCEEEEEcHHHHHHHHHH
Confidence 57777777775 368999999998766655
No 115
>PLN02162 triacylglycerol lipase
Probab=39.12 E-value=54 Score=33.55 Aligned_cols=25 Identities=28% Similarity=0.256 Sum_probs=20.6
Q ss_pred CeEEEeecChhHHHHHHhHHHHHHh
Q 022081 75 KQAFLTGCSAGGLAAVIHCDDFRER 99 (303)
Q Consensus 75 ~~v~lsG~SAGG~g~~~~~d~~~~~ 99 (303)
.++++||+|-||-=|.+.+..++..
T Consensus 278 ~kliVTGHSLGGALAtLaAa~L~~~ 302 (475)
T PLN02162 278 LKYILTGHSLGGALAALFPAILAIH 302 (475)
T ss_pred ceEEEEecChHHHHHHHHHHHHHHc
Confidence 4799999999998888887777643
No 116
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=39.05 E-value=38 Score=32.53 Aligned_cols=30 Identities=20% Similarity=0.410 Sum_probs=21.4
Q ss_pred HHHHHHHcCCCCcCeEEEeecChhHHHHHHhHH
Q 022081 62 LMDELLSVGMSNAKQAFLTGCSAGGLAAVIHCD 94 (303)
Q Consensus 62 vl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~d 94 (303)
|++.|++.|+. ++ +++|.|||++-+.+.+-
T Consensus 87 vl~aL~e~~l~-~~--~i~GtSaGAi~aa~~~~ 116 (298)
T cd07206 87 VVKALWEQDLL-PR--VISGSSAGAIVAALLGT 116 (298)
T ss_pred HHHHHHHcCCC-CC--EEEEEcHHHHHHHHHHc
Confidence 45666666664 22 69999999998877664
No 117
>CHL00024 psbI photosystem II protein I
Probab=38.55 E-value=18 Score=23.85 Aligned_cols=13 Identities=54% Similarity=0.963 Sum_probs=11.7
Q ss_pred ccccCCCCCCCCC
Q 022081 8 SGILSSDPSQNPD 20 (303)
Q Consensus 8 ~Gils~~~~~NP~ 20 (303)
-|.||+|+..||.
T Consensus 21 fGFlsnDp~RnP~ 33 (36)
T CHL00024 21 FGFLSNDPGRNPG 33 (36)
T ss_pred ccccCCCCCCCCC
Confidence 5999999999994
No 118
>PRK02655 psbI photosystem II reaction center I protein I; Provisional
Probab=38.20 E-value=18 Score=24.03 Aligned_cols=13 Identities=62% Similarity=1.025 Sum_probs=11.7
Q ss_pred ccccCCCCCCCCC
Q 022081 8 SGILSSDPSQNPD 20 (303)
Q Consensus 8 ~Gils~~~~~NP~ 20 (303)
-|.||+|+..||-
T Consensus 21 FGflsnDP~RnP~ 33 (38)
T PRK02655 21 FGFLSSDPTRNPG 33 (38)
T ss_pred cccCCCCCCCCCC
Confidence 5999999999994
No 119
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=37.82 E-value=41 Score=32.72 Aligned_cols=30 Identities=17% Similarity=0.340 Sum_probs=21.6
Q ss_pred HHHHHHHcCCCCcCeEEEeecChhHHHHHHhHH
Q 022081 62 LMDELLSVGMSNAKQAFLTGCSAGGLAAVIHCD 94 (303)
Q Consensus 62 vl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~d 94 (303)
|++-|.+.|+.- -+++|+|||++-+.+.+-
T Consensus 86 VlkaL~e~gl~p---~~i~GsSaGAivaa~~~~ 115 (323)
T cd07231 86 VVRTLVEHQLLP---RVIAGSSVGSIVCAIIAT 115 (323)
T ss_pred HHHHHHHcCCCC---CEEEEECHHHHHHHHHHc
Confidence 566666667742 259999999998766654
No 120
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=37.16 E-value=68 Score=31.55 Aligned_cols=50 Identities=30% Similarity=0.357 Sum_probs=33.4
Q ss_pred HHHHHHHHHcCCCCcCeEEEeecChhHHHHHHhHHHHHHhCCCCc-EEEEee---cCcccc
Q 022081 60 EALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHCDDFRERLPQHA-TVKCLA---DASFFL 116 (303)
Q Consensus 60 ~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~d~~~~~lp~~~-~v~~l~---DsG~fl 116 (303)
+++++||.++|+. ++-|+|-|.||. ++.-.....|+.+ .|-|++ .|+.|.
T Consensus 163 ~~Ll~Wl~~~G~~---~~g~~G~SmGG~----~A~laa~~~p~pv~~vp~ls~~sAs~vFt 216 (348)
T PF09752_consen 163 RALLHWLEREGYG---PLGLTGISMGGH----MAALAASNWPRPVALVPCLSWSSASVVFT 216 (348)
T ss_pred HHHHHHHHhcCCC---ceEEEEechhHh----hHHhhhhcCCCceeEEEeecccCCCcchh
Confidence 4568899887665 899999999995 5556666777532 334443 334554
No 121
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=36.95 E-value=1.3e+02 Score=26.20 Aligned_cols=40 Identities=20% Similarity=0.220 Sum_probs=27.7
Q ss_pred ehHHHHHHHHHHHHHcCCCCcCeEEEeecChhHHHHHHhHHH
Q 022081 54 RGQLIWEALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHCDD 95 (303)
Q Consensus 54 rG~~i~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~d~ 95 (303)
.|...+...|++..++ -++ .+++|+|.|-|+.-+.-....
T Consensus 62 ~G~~~~~~~i~~~~~~-CP~-~kivl~GYSQGA~V~~~~~~~ 101 (179)
T PF01083_consen 62 AGVANLVRLIEEYAAR-CPN-TKIVLAGYSQGAMVVGDALSG 101 (179)
T ss_dssp HHHHHHHHHHHHHHHH-STT-SEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-CCC-CCEEEEecccccHHHHHHHHh
Confidence 4666777777776653 343 489999999999765544433
No 122
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=36.67 E-value=48 Score=29.60 Aligned_cols=23 Identities=30% Similarity=0.433 Sum_probs=18.3
Q ss_pred CcCeEEEeecChhHHHHHHhHHH
Q 022081 73 NAKQAFLTGCSAGGLAAVIHCDD 95 (303)
Q Consensus 73 ~a~~v~lsG~SAGG~g~~~~~d~ 95 (303)
..++++|.|.|.||.-++..+..
T Consensus 99 ~~~~~~lvG~S~Gg~ia~~~a~~ 121 (282)
T TIGR03343 99 DIEKAHLVGNSMGGATALNFALE 121 (282)
T ss_pred CCCCeeEEEECchHHHHHHHHHh
Confidence 34689999999999888766543
No 123
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=36.30 E-value=51 Score=31.90 Aligned_cols=37 Identities=32% Similarity=0.434 Sum_probs=23.2
Q ss_pred HHHHHHHHcCCCCcCeEEEeecChhHHHHHHhHHHHHHhCCC
Q 022081 61 ALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHCDDFRERLPQ 102 (303)
Q Consensus 61 avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~d~~~~~lp~ 102 (303)
+++.+|.. ....+|+|.|+|.||-=+ -.-.....+|+
T Consensus 135 ~~i~~~fg---e~~~~iilVGHSmGGaIa--v~~a~~k~lps 171 (343)
T KOG2564|consen 135 AVIKELFG---ELPPQIILVGHSMGGAIA--VHTAASKTLPS 171 (343)
T ss_pred HHHHHHhc---cCCCceEEEeccccchhh--hhhhhhhhchh
Confidence 55555442 356679999999998433 33344566774
No 124
>PLN02934 triacylglycerol lipase
Probab=36.01 E-value=69 Score=33.16 Aligned_cols=40 Identities=23% Similarity=0.247 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHcCCCCcCeEEEeecChhHHHHHHhHHHHHHh
Q 022081 58 IWEALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHCDDFRER 99 (303)
Q Consensus 58 i~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~d~~~~~ 99 (303)
.+...+++++++ .++ .+|++||+|-||-=|.+.+..++..
T Consensus 306 ~v~~~lk~ll~~-~p~-~kIvVTGHSLGGALAtLaA~~L~l~ 345 (515)
T PLN02934 306 AVRSKLKSLLKE-HKN-AKFVVTGHSLGGALAILFPTVLVLQ 345 (515)
T ss_pred HHHHHHHHHHHH-CCC-CeEEEeccccHHHHHHHHHHHHHHh
Confidence 355556666653 444 4799999999998888887766643
No 125
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=35.89 E-value=65 Score=31.15 Aligned_cols=54 Identities=17% Similarity=0.313 Sum_probs=37.1
Q ss_pred HHHHHHH-cCCCCcCeEEEeecChhHHHHHHhHHHHHH--hCCCCcEEEEeecCccccCCC
Q 022081 62 LMDELLS-VGMSNAKQAFLTGCSAGGLAAVIHCDDFRE--RLPQHATVKCLADASFFLDES 119 (303)
Q Consensus 62 vl~~L~~-~g~~~a~~v~lsG~SAGG~g~~~~~d~~~~--~lp~~~~v~~l~DsG~fld~~ 119 (303)
.|+.|.. .|++ .++|-|.|+|-||--+-+-..++.. .+ .+|.+|.=||..+...
T Consensus 137 ~l~~L~~~~g~~-~~~ihlIGhSLGAHvaG~aG~~~~~~~ki---~rItgLDPAgP~F~~~ 193 (331)
T PF00151_consen 137 FLSFLINNFGVP-PENIHLIGHSLGAHVAGFAGKYLKGGGKI---GRITGLDPAGPLFENN 193 (331)
T ss_dssp HHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHTTT---S---SEEEEES-B-TTTTTS
T ss_pred HHHHHHhhcCCC-hhHEEEEeeccchhhhhhhhhhccCccee---eEEEecCcccccccCC
Confidence 3566663 3544 7899999999999888877777777 45 3799999999887654
No 126
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=35.58 E-value=55 Score=31.53 Aligned_cols=66 Identities=24% Similarity=0.274 Sum_probs=46.1
Q ss_pred EEEehHHHHHHHHHHHHHc---C---CCCcCeEEEeecChhHHHHHHhHHHHHHhCCCCcEEEEeecCccccCCCCC
Q 022081 51 LFFRGQLIWEALMDELLSV---G---MSNAKQAFLTGCSAGGLAAVIHCDDFRERLPQHATVKCLADASFFLDESDV 121 (303)
Q Consensus 51 l~frG~~i~~avl~~L~~~---g---~~~a~~v~lsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~fld~~~~ 121 (303)
.++.=..-++.+..+|++. - .+.|+.=+|+|.|-||+.+++-.=.-=++| -.+++-||.|-+.+.-
T Consensus 147 ~~~~n~~~~~~L~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~F-----G~V~s~Sps~~~~~~~ 218 (299)
T COG2382 147 ELHCNEAYWRFLAQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERF-----GHVLSQSGSFWWTPLD 218 (299)
T ss_pred HhcccHHHHHHHHHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhh-----ceeeccCCccccCccc
Confidence 3445566788889999873 2 246788899999999998876443333333 4667889988876554
No 127
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=35.11 E-value=43 Score=31.86 Aligned_cols=33 Identities=21% Similarity=0.233 Sum_probs=24.6
Q ss_pred HHHHHHHHHHcCCCCcCeEEEeecChhHHHHHHhH
Q 022081 59 WEALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHC 93 (303)
Q Consensus 59 ~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~ 93 (303)
+.++++++.+. ...+++.|.|.|.||.-++..+
T Consensus 122 ~~~~v~~l~~~--~~~~~i~lvGhS~GG~i~~~~~ 154 (350)
T TIGR01836 122 IDKCVDYICRT--SKLDQISLLGICQGGTFSLCYA 154 (350)
T ss_pred HHHHHHHHHHH--hCCCcccEEEECHHHHHHHHHH
Confidence 66777887753 2457899999999998766543
No 128
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=34.98 E-value=81 Score=26.57 Aligned_cols=35 Identities=26% Similarity=0.338 Sum_probs=22.5
Q ss_pred HHHHHHHHHHH-cCCCCcCeEEEeecChhHHHHHHhHHH
Q 022081 58 IWEALMDELLS-VGMSNAKQAFLTGCSAGGLAAVIHCDD 95 (303)
Q Consensus 58 i~~avl~~L~~-~g~~~a~~v~lsG~SAGG~g~~~~~d~ 95 (303)
-+.+.++.+++ .|..+ +.+.|.|.||.=++..+..
T Consensus 29 ~~~~~~~~~~~~l~~~~---~~~vG~S~Gg~~~~~~a~~ 64 (230)
T PF00561_consen 29 DLAADLEALREALGIKK---INLVGHSMGGMLALEYAAQ 64 (230)
T ss_dssp HHHHHHHHHHHHHTTSS---EEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCC---eEEEEECCChHHHHHHHHH
Confidence 34444555554 24433 9999999999777665543
No 129
>PF04260 DUF436: Protein of unknown function (DUF436) ; InterPro: IPR006340 Members of this family are uncharacterised proteins of about 180 amino acids from the Bacillus/Clostridium group of Gram-positive bacteria, found in no more than one copy per genome. ; PDB: 1V8D_C.
Probab=34.16 E-value=40 Score=29.84 Aligned_cols=26 Identities=31% Similarity=0.538 Sum_probs=17.7
Q ss_pred HHHHHHHHHHcCCCCcCeEEEeecCh
Q 022081 59 WEALMDELLSVGMSNAKQAFLTGCSA 84 (303)
Q Consensus 59 ~~avl~~L~~~g~~~a~~v~lsG~SA 84 (303)
+++++++|+++.--++.++++.|||-
T Consensus 3 ~~~~~~El~~~a~l~~g~i~VvGcST 28 (172)
T PF04260_consen 3 LRQALEELLEQANLKPGQIFVVGCST 28 (172)
T ss_dssp HHHHHHHHHHHS---TT-EEEEEE-H
T ss_pred HHHHHHHHHHhcCCCCCCEEEEeeeH
Confidence 67889999986556778999999984
No 130
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=33.81 E-value=57 Score=29.68 Aligned_cols=67 Identities=18% Similarity=0.150 Sum_probs=39.6
Q ss_pred CcCceEEEEecCCCcccCCCCCcccCCCceEEEehHHHHHHHHHHHHHcCCCCcCeEEEeecChhHHH
Q 022081 21 FFSWNKVKIRYCDGASFAGRPESEFKNGTNLFFRGQLIWEALMDELLSVGMSNAKQAFLTGCSAGGLA 88 (303)
Q Consensus 21 f~nwn~V~vpYC~Gd~~~G~~~~~~~~~~~l~frG~~i~~avl~~L~~~g~~~a~~v~lsG~SAGG~g 88 (303)
|..--.||-||=-......-............=-++.-+++++++-+. ...+-.-+||+|+|-|+.-
T Consensus 42 F~~~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~-~~n~GRPfILaGHSQGs~~ 108 (207)
T PF11288_consen 42 FNGVCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLA-NYNNGRPFILAGHSQGSMH 108 (207)
T ss_pred hhcCCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHH-hcCCCCCEEEEEeChHHHH
Confidence 555666777765554433332111011222222355667777777775 5677788999999999953
No 131
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=33.78 E-value=58 Score=33.04 Aligned_cols=48 Identities=23% Similarity=0.234 Sum_probs=34.0
Q ss_pred eEEEehHHHHHHHHHHH-------HHcCCCCcCeEEEeecChhHHHHHHhHHHHHHhCC
Q 022081 50 NLFFRGQLIWEALMDEL-------LSVGMSNAKQAFLTGCSAGGLAAVIHCDDFRERLP 101 (303)
Q Consensus 50 ~l~frG~~i~~avl~~L-------~~~g~~~a~~v~lsG~SAGG~g~~~~~d~~~~~lp 101 (303)
...|-|+...+.+|++. ++.--.++..||..|.|-|| +-+.++|-.+|
T Consensus 135 ~~~hlgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGG----MLaAWfRlKYP 189 (492)
T KOG2183|consen 135 DARHLGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGG----MLAAWFRLKYP 189 (492)
T ss_pred ChhhhccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhh----HHHHHHHhcCh
Confidence 45577888777776553 33222467899999999999 55677787777
No 132
>PLN02761 lipase class 3 family protein
Probab=33.33 E-value=92 Score=32.34 Aligned_cols=25 Identities=28% Similarity=0.279 Sum_probs=21.7
Q ss_pred CeEEEeecChhHHHHHHhHHHHHHh
Q 022081 75 KQAFLTGCSAGGLAAVIHCDDFRER 99 (303)
Q Consensus 75 ~~v~lsG~SAGG~g~~~~~d~~~~~ 99 (303)
.+|+++|+|-||-=|.|.+..++..
T Consensus 294 ~sItVTGHSLGGALAtLaA~DIa~~ 318 (527)
T PLN02761 294 ISITVTGHSLGASLALVSAYDIAEL 318 (527)
T ss_pred ceEEEeccchHHHHHHHHHHHHHHh
Confidence 4899999999999888888888764
No 133
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=33.24 E-value=1.1e+02 Score=28.93 Aligned_cols=38 Identities=26% Similarity=0.294 Sum_probs=24.2
Q ss_pred Ce-EEEeecChhHHHHHHhHHHHHHhCCCCcEEEEeecCcccc
Q 022081 75 KQ-AFLTGCSAGGLAAVIHCDDFRERLPQHATVKCLADASFFL 116 (303)
Q Consensus 75 ~~-v~lsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~fl 116 (303)
++ ++|.|.|.||.=++..+-. .|..++-.++.+++...
T Consensus 126 ~~~~~l~G~S~Gg~ia~~~a~~----~p~~v~~lvl~~~~~~~ 164 (351)
T TIGR01392 126 EQIAAVVGGSMGGMQALEWAID----YPERVRAIVVLATSARH 164 (351)
T ss_pred CCceEEEEECHHHHHHHHHHHH----ChHhhheEEEEccCCcC
Confidence 45 9999999999776665544 34333344556665543
No 134
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=33.19 E-value=49 Score=31.11 Aligned_cols=30 Identities=17% Similarity=0.327 Sum_probs=21.9
Q ss_pred HHHHHHHcCCCCcCeEEEeecChhHHHHHHhHH
Q 022081 62 LMDELLSVGMSNAKQAFLTGCSAGGLAAVIHCD 94 (303)
Q Consensus 62 vl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~d 94 (303)
||+.|.+.|++ -=+++|.|||++=+.+++-
T Consensus 28 VL~aLeE~gi~---~d~v~GtSaGAiiga~ya~ 57 (269)
T cd07227 28 ILQALEEAGIP---IDAIGGTSIGSFVGGLYAR 57 (269)
T ss_pred HHHHHHHcCCC---ccEEEEECHHHHHHHHHHc
Confidence 46666666775 4578999999987766654
No 135
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=32.80 E-value=80 Score=30.42 Aligned_cols=57 Identities=21% Similarity=0.236 Sum_probs=39.2
Q ss_pred eEEEehHHHHHHHHHHHHHcCCCCcCeEEEeecChhHHHHHHhHHHHHHhCCC-CcEEEEeecCcc
Q 022081 50 NLFFRGQLIWEALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHCDDFRERLPQ-HATVKCLADASF 114 (303)
Q Consensus 50 ~l~frG~~i~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~d~~~~~lp~-~~~v~~l~DsG~ 114 (303)
.++.....---+.+.+|.+ +.=+|.|.|.|+ ++.-+-.+++.+++ ..-|.+++|+|.
T Consensus 238 ~v~~V~d~~A~~~~r~La~------~eGilvG~SsGA--~~~aa~~~a~~~~~g~~IVti~pD~G~ 295 (300)
T COG0031 238 EVIRVSDEEAIATARRLAR------EEGLLVGISSGA--ALAAALKLAKELPAGKTIVTILPDSGE 295 (300)
T ss_pred eEEEECHHHHHHHHHHHHH------HhCeeecccHHH--HHHHHHHHHHhcCCCCeEEEEECCCcc
Confidence 4445555555566667765 345788999886 56667788888874 445788899984
No 136
>PRK10749 lysophospholipase L2; Provisional
Probab=32.70 E-value=75 Score=29.90 Aligned_cols=21 Identities=14% Similarity=0.268 Sum_probs=16.6
Q ss_pred cCeEEEeecChhHHHHHHhHH
Q 022081 74 AKQAFLTGCSAGGLAAVIHCD 94 (303)
Q Consensus 74 a~~v~lsG~SAGG~g~~~~~d 94 (303)
.+++.|.|.|.||.-++..+.
T Consensus 130 ~~~~~l~GhSmGG~ia~~~a~ 150 (330)
T PRK10749 130 YRKRYALAHSMGGAILTLFLQ 150 (330)
T ss_pred CCCeEEEEEcHHHHHHHHHHH
Confidence 468999999999987765543
No 137
>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1. Members of this family share a patatin domain, initially discovered in potato tubers. Some members of PNPLA1 subfamily do not have the lipase consensus sequence Gly-X-Ser-X-Gly which is essential for hydrolase activity. This family includes PNPLA1 from Homo sapiens and Gallus gallus. Currently, there is no literature available on the physiological role, structure, or enzymatic activity of PNPLA1. It is expressed in various human tissues in low mRNA levels.
Probab=32.18 E-value=53 Score=32.72 Aligned_cols=16 Identities=31% Similarity=0.443 Sum_probs=12.9
Q ss_pred EEeecChhHHHHHHhH
Q 022081 78 FLTGCSAGGLAAVIHC 93 (303)
Q Consensus 78 ~lsG~SAGG~g~~~~~ 93 (303)
.++|.|||++-+.+.+
T Consensus 47 ~IaGtSAGALvAAl~a 62 (382)
T cd07219 47 RVAGTSAGSVIAALVV 62 (382)
T ss_pred eEEEEcHHHHHHHHHH
Confidence 4899999999876554
No 138
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=32.11 E-value=17 Score=34.03 Aligned_cols=42 Identities=26% Similarity=0.272 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHcCCCCcCeEEEeecChhHHHHHHhHHHHHHh
Q 022081 58 IWEALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHCDDFRER 99 (303)
Q Consensus 58 i~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~d~~~~~ 99 (303)
--+++|++|...-.-+-++++|.|-|-||--|+.-+...+++
T Consensus 132 Ds~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~r 173 (300)
T KOG4391|consen 132 DSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDR 173 (300)
T ss_pred cHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhh
Confidence 468999999986555667899999999995544444444443
No 139
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=31.72 E-value=52 Score=32.87 Aligned_cols=31 Identities=26% Similarity=0.582 Sum_probs=22.5
Q ss_pred HHHHHHHHcCCCCcCeEEEeecChhHHHHHHhHH
Q 022081 61 ALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHCD 94 (303)
Q Consensus 61 avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~d 94 (303)
-|++-|+++|+. ++ +++|.|||++-+.+.+-
T Consensus 84 GVlkaL~e~gll-p~--iI~GtSAGAivaalla~ 114 (407)
T cd07232 84 GVVKALLDADLL-PN--VISGTSGGSLVAALLCT 114 (407)
T ss_pred HHHHHHHhCCCC-CC--EEEEECHHHHHHHHHHc
Confidence 467777777764 22 59999999998766654
No 140
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=31.67 E-value=67 Score=27.91 Aligned_cols=21 Identities=29% Similarity=0.287 Sum_probs=16.8
Q ss_pred cCeEEEeecChhHHHHHHhHH
Q 022081 74 AKQAFLTGCSAGGLAAVIHCD 94 (303)
Q Consensus 74 a~~v~lsG~SAGG~g~~~~~d 94 (303)
-++++|.|.|.||.-++.-+-
T Consensus 65 ~~~~~lvG~S~Gg~va~~~a~ 85 (242)
T PRK11126 65 ILPYWLVGYSLGGRIAMYYAC 85 (242)
T ss_pred CCCeEEEEECHHHHHHHHHHH
Confidence 478999999999977665444
No 141
>COG4099 Predicted peptidase [General function prediction only]
Probab=31.43 E-value=56 Score=31.92 Aligned_cols=43 Identities=16% Similarity=0.302 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHcCCCCcCeEEEeecChhHHHHHHhHHHHHHhC
Q 022081 58 IWEALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHCDDFRERL 100 (303)
Q Consensus 58 i~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~d~~~~~l 100 (303)
-++.+.+.|.++---+-.+|.++|-|-||+|++.-...+-+.+
T Consensus 252 ~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfF 294 (387)
T COG4099 252 KIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFF 294 (387)
T ss_pred HHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhh
Confidence 4555566666632224568999999999999987665544444
No 142
>PLN02872 triacylglycerol lipase
Probab=31.30 E-value=72 Score=31.61 Aligned_cols=34 Identities=15% Similarity=0.314 Sum_probs=25.8
Q ss_pred ehHHHHHHHHHHHHHcCCCCcCeEEEeecChhHHHHH
Q 022081 54 RGQLIWEALMDELLSVGMSNAKQAFLTGCSAGGLAAV 90 (303)
Q Consensus 54 rG~~i~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~ 90 (303)
.+..-+.+++++++.. . .+++.+.|+|.||.-++
T Consensus 142 ~a~~Dl~a~id~i~~~--~-~~~v~~VGhS~Gg~~~~ 175 (395)
T PLN02872 142 LALYDLAEMIHYVYSI--T-NSKIFIVGHSQGTIMSL 175 (395)
T ss_pred HHHHHHHHHHHHHHhc--c-CCceEEEEECHHHHHHH
Confidence 3446778888888753 2 36899999999998765
No 143
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=31.27 E-value=53 Score=30.51 Aligned_cols=32 Identities=22% Similarity=0.174 Sum_probs=19.5
Q ss_pred HHHHHHHcCCCCc-CeEEEeecChhHHHHHHhH
Q 022081 62 LMDELLSVGMSNA-KQAFLTGCSAGGLAAVIHC 93 (303)
Q Consensus 62 vl~~L~~~g~~~a-~~v~lsG~SAGG~g~~~~~ 93 (303)
|++-|++.+..-- +--.++|.|||++-+.+.+
T Consensus 18 Vl~aL~e~~~~l~~~~~~i~GtSAGAl~aa~~a 50 (252)
T cd07221 18 VTRCLSERAPHLLRDARMFFGASAGALHCVTFL 50 (252)
T ss_pred HHHHHHHhCcchhccCCEEEEEcHHHHHHHHHH
Confidence 4555555432211 1236899999999877664
No 144
>PF02532 PsbI: Photosystem II reaction centre I protein (PSII 4.8 kDa protein); InterPro: IPR003686 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbI, which is tightly associated with the D1/D2 heterodimer in PSII. The function of PsbI is unknown, but it may be involved in the assembly, dimerisation or stabilisation of PSII dimers [].; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane; PDB: 3A0H_i 3ARC_I 3A0B_i 3BZ2_I 3PRQ_I 3KZI_I 3PRR_I 2AXT_i 4FBY_I 1S5L_i ....
Probab=31.01 E-value=22 Score=23.47 Aligned_cols=13 Identities=54% Similarity=0.963 Sum_probs=11.6
Q ss_pred ccccCCCCCCCCC
Q 022081 8 SGILSSDPSQNPD 20 (303)
Q Consensus 8 ~Gils~~~~~NP~ 20 (303)
-|.+|+|+..||-
T Consensus 21 fGflsnDp~RnP~ 33 (36)
T PF02532_consen 21 FGFLSNDPGRNPG 33 (36)
T ss_dssp HHHHTTCTTSSSS
T ss_pred ccccCCCCCCCCC
Confidence 5899999999994
No 145
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=30.97 E-value=64 Score=31.73 Aligned_cols=37 Identities=27% Similarity=0.302 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHcCCCCcCeEEEeecChhHHHHHHhHHHHH
Q 022081 58 IWEALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHCDDFR 97 (303)
Q Consensus 58 i~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~d~~~ 97 (303)
.+++.|+++... +-++|+|.|+|.||+=+..-.....
T Consensus 105 ~lk~~ie~~~~~---~~~kv~li~HSmGgl~~~~fl~~~~ 141 (389)
T PF02450_consen 105 KLKQLIEEAYKK---NGKKVVLIAHSMGGLVARYFLQWMP 141 (389)
T ss_pred HHHHHHHHHHHh---cCCcEEEEEeCCCchHHHHHHHhcc
Confidence 355555555542 2689999999999987766555553
No 146
>PRK10985 putative hydrolase; Provisional
Probab=30.77 E-value=67 Score=30.24 Aligned_cols=33 Identities=15% Similarity=-0.005 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHcCCCCcCeEEEeecChhHHHHHH
Q 022081 57 LIWEALMDELLSVGMSNAKQAFLTGCSAGGLAAVI 91 (303)
Q Consensus 57 ~i~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~ 91 (303)
.-+.+++++|.++ ++ .+++++.|.|.||.=+..
T Consensus 115 ~D~~~~i~~l~~~-~~-~~~~~~vG~S~GG~i~~~ 147 (324)
T PRK10985 115 EDARFFLRWLQRE-FG-HVPTAAVGYSLGGNMLAC 147 (324)
T ss_pred HHHHHHHHHHHHh-CC-CCCEEEEEecchHHHHHH
Confidence 4566777877753 33 356999999999964433
No 147
>PLN02578 hydrolase
Probab=30.70 E-value=1.4e+02 Score=28.36 Aligned_cols=26 Identities=31% Similarity=0.438 Sum_probs=18.6
Q ss_pred cCeEEEeecChhHHHHHHhHHHHHHh
Q 022081 74 AKQAFLTGCSAGGLAAVIHCDDFRER 99 (303)
Q Consensus 74 a~~v~lsG~SAGG~g~~~~~d~~~~~ 99 (303)
.++++|.|.|.||+=++..+-...+.
T Consensus 151 ~~~~~lvG~S~Gg~ia~~~A~~~p~~ 176 (354)
T PLN02578 151 KEPAVLVGNSLGGFTALSTAVGYPEL 176 (354)
T ss_pred cCCeEEEEECHHHHHHHHHHHhChHh
Confidence 36799999999998666555544333
No 148
>PRK11071 esterase YqiA; Provisional
Probab=30.58 E-value=85 Score=27.37 Aligned_cols=34 Identities=24% Similarity=0.189 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHcCCCCcCeEEEeecChhHHHHHHhH
Q 022081 58 IWEALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHC 93 (303)
Q Consensus 58 i~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~ 93 (303)
.+.+.++++++. +. .++++|.|.|.||.=++.-+
T Consensus 46 ~~~~~l~~l~~~-~~-~~~~~lvG~S~Gg~~a~~~a 79 (190)
T PRK11071 46 DAAELLESLVLE-HG-GDPLGLVGSSLGGYYATWLS 79 (190)
T ss_pred HHHHHHHHHHHH-cC-CCCeEEEEECHHHHHHHHHH
Confidence 355566666652 22 35799999999998666443
No 149
>PRK13917 plasmid segregation protein ParM; Provisional
Probab=30.57 E-value=1.3e+02 Score=28.98 Aligned_cols=26 Identities=19% Similarity=0.341 Sum_probs=20.4
Q ss_pred CCCcCeEEEeecChhHHHHHHhHHHHHHhCC
Q 022081 71 MSNAKQAFLTGCSAGGLAAVIHCDDFRERLP 101 (303)
Q Consensus 71 ~~~a~~v~lsG~SAGG~g~~~~~d~~~~~lp 101 (303)
..+.++|+|+|.+|- +..++|++.+|
T Consensus 289 ~~~~d~IiL~GGGA~-----ll~~~lk~~f~ 314 (344)
T PRK13917 289 INSFDRVIVTGGGAN-----IFFDSLSHWYS 314 (344)
T ss_pred cCCCCEEEEECCcHH-----HHHHHHHHHcC
Confidence 456788999987664 34699999998
No 150
>PRK03592 haloalkane dehalogenase; Provisional
Probab=30.36 E-value=1.6e+02 Score=26.75 Aligned_cols=34 Identities=18% Similarity=0.220 Sum_probs=22.2
Q ss_pred CeEEEeecChhHHHHHHhHHHHHHhCCCCcEEEEeecC
Q 022081 75 KQAFLTGCSAGGLAAVIHCDDFRERLPQHATVKCLADA 112 (303)
Q Consensus 75 ~~v~lsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~Ds 112 (303)
++++|.|.|.||.=++..+ .+.|..++-.++.++
T Consensus 93 ~~~~lvGhS~Gg~ia~~~a----~~~p~~v~~lil~~~ 126 (295)
T PRK03592 93 DDVVLVGHDWGSALGFDWA----ARHPDRVRGIAFMEA 126 (295)
T ss_pred CCeEEEEECHHHHHHHHHH----HhChhheeEEEEECC
Confidence 6799999999998766443 445644443444454
No 151
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=30.13 E-value=61 Score=32.36 Aligned_cols=36 Identities=22% Similarity=0.329 Sum_probs=23.6
Q ss_pred HHHHHHHcCCCCcCeEEEeecChhHHHHHHhHH----HHHHhC
Q 022081 62 LMDELLSVGMSNAKQAFLTGCSAGGLAAVIHCD----DFRERL 100 (303)
Q Consensus 62 vl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~d----~~~~~l 100 (303)
|++-|.++|+.-- +++|+|||++-+.+.+- .+.+.+
T Consensus 101 v~kaL~e~gl~p~---~i~GtS~Gaivaa~~a~~~~~e~~~~l 140 (391)
T cd07229 101 VVKALWLRGLLPR---IITGTATGALIAALVGVHTDEELLRFL 140 (391)
T ss_pred HHHHHHHcCCCCc---eEEEecHHHHHHHHHHcCCHHHHHHHH
Confidence 4666666676421 59999999987665554 444444
No 152
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=29.86 E-value=1.4e+02 Score=25.87 Aligned_cols=20 Identities=25% Similarity=0.255 Sum_probs=17.4
Q ss_pred CeEEEeecChhHHHHHHhHH
Q 022081 75 KQAFLTGCSAGGLAAVIHCD 94 (303)
Q Consensus 75 ~~v~lsG~SAGG~g~~~~~d 94 (303)
+.++|.|+|.|.+.++-+..
T Consensus 55 ~~~ilVaHSLGc~~~l~~l~ 74 (171)
T PF06821_consen 55 EPTILVAHSLGCLTALRWLA 74 (171)
T ss_dssp TTEEEEEETHHHHHHHHHHH
T ss_pred CCeEEEEeCHHHHHHHHHHh
Confidence 34999999999999888876
No 153
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=29.50 E-value=57 Score=32.27 Aligned_cols=34 Identities=29% Similarity=0.382 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHc---C-C---CCcCeEEEeecChhHHHHHH
Q 022081 58 IWEALMDELLSV---G-M---SNAKQAFLTGCSAGGLAAVI 91 (303)
Q Consensus 58 i~~avl~~L~~~---g-~---~~a~~v~lsG~SAGG~g~~~ 91 (303)
-+.++|++|++. . + -++.+|.+.|.|-||+.++.
T Consensus 135 dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~ 175 (365)
T COG4188 135 DISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAME 175 (365)
T ss_pred cHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHH
Confidence 567888888874 2 3 26789999999999998664
No 154
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=29.29 E-value=67 Score=29.33 Aligned_cols=36 Identities=22% Similarity=0.171 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHcCCCCcCeEEEeecChhHHHHHHh
Q 022081 56 QLIWEALMDELLSVGMSNAKQAFLTGCSAGGLAAVIH 92 (303)
Q Consensus 56 ~~i~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~ 92 (303)
..-.+++++||.+ .-+++....|+|.|-|++=+++-
T Consensus 85 ~~Da~aaldW~~~-~hp~s~~~~l~GfSFGa~Ia~~l 120 (210)
T COG2945 85 LEDAAAALDWLQA-RHPDSASCWLAGFSFGAYIAMQL 120 (210)
T ss_pred HHHHHHHHHHHHh-hCCCchhhhhcccchHHHHHHHH
Confidence 4578899999997 46777777899999999755543
No 155
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=28.86 E-value=97 Score=29.31 Aligned_cols=18 Identities=39% Similarity=0.473 Sum_probs=14.4
Q ss_pred CeEEEeecChhHHHHHHh
Q 022081 75 KQAFLTGCSAGGLAAVIH 92 (303)
Q Consensus 75 ~~v~lsG~SAGG~g~~~~ 92 (303)
.+++|.|.|.||.-++..
T Consensus 162 ~~~~LvGhSmGG~val~~ 179 (349)
T PLN02385 162 LPSFLFGQSMGGAVALKV 179 (349)
T ss_pred CCEEEEEeccchHHHHHH
Confidence 469999999999776543
No 156
>COG0627 Predicted esterase [General function prediction only]
Probab=28.80 E-value=55 Score=31.61 Aligned_cols=35 Identities=17% Similarity=0.226 Sum_probs=25.2
Q ss_pred eEEEeecChhHHHHHHhHHHHHHhCCCCcEEEEeecCccc
Q 022081 76 QAFLTGCSAGGLAAVIHCDDFRERLPQHATVKCLADASFF 115 (303)
Q Consensus 76 ~v~lsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~f 115 (303)
+--++|.|.||+||+..+-+--+++ ..+.+.||+.
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~pd~f-----~~~sS~Sg~~ 187 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKHPDRF-----KSASSFSGIL 187 (316)
T ss_pred CceeEEEeccchhhhhhhhhCcchh-----ceeccccccc
Confidence 7889999999999998544433444 3556677755
No 157
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=28.53 E-value=78 Score=30.28 Aligned_cols=43 Identities=16% Similarity=0.268 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHc-CCCCcCeE-EEeecChhHHHHHHhH-----HHHHHhC
Q 022081 58 IWEALMDELLSV-GMSNAKQA-FLTGCSAGGLAAVIHC-----DDFRERL 100 (303)
Q Consensus 58 i~~avl~~L~~~-g~~~a~~v-~lsG~SAGG~g~~~~~-----d~~~~~l 100 (303)
+.-.||+.|.+. |.+-.+.+ +++|.|+||+=++..+ +.+.+.+
T Consensus 13 ~~i~vL~~le~~~g~~i~~~fD~i~GTStGgiIA~~la~g~s~~e~~~~y 62 (312)
T cd07212 13 VLIQMLIAIEKALGRPIRELFDWIAGTSTGGILALALLHGKSLREARRLY 62 (312)
T ss_pred HHHHHHHHHHHHhCCCchhhccEEEeeChHHHHHHHHHcCCCHHHHHHHH
Confidence 344456666653 44322322 7999999997665543 4455554
No 158
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=28.31 E-value=26 Score=36.87 Aligned_cols=35 Identities=23% Similarity=0.319 Sum_probs=32.3
Q ss_pred EehHHHHHHHHHHHHHcCCCCcCeEEEeecChhHH
Q 022081 53 FRGQLIWEALMDELLSVGMSNAKQAFLTGCSAGGL 87 (303)
Q Consensus 53 frG~~i~~avl~~L~~~g~~~a~~v~lsG~SAGG~ 87 (303)
.+...-+.||.++|..+|+..|+++=+-|.|=|||
T Consensus 478 q~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGL 512 (648)
T COG1505 478 QNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGL 512 (648)
T ss_pred hhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCce
Confidence 56677899999999999999999999999999997
No 159
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=28.17 E-value=35 Score=30.81 Aligned_cols=35 Identities=31% Similarity=0.623 Sum_probs=19.9
Q ss_pred eEEEeecChhHHHHHHhHHHHHHhCCCCcEEEEeecCccc
Q 022081 76 QAFLTGCSAGGLAAVIHCDDFRERLPQHATVKCLADASFF 115 (303)
Q Consensus 76 ~v~lsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~f 115 (303)
.-+++|||.||+ |+-.+-=+.| ..--++|+=||.+
T Consensus 102 s~~~sgcsmGay----hA~nfvfrhP-~lftkvialSGvY 136 (227)
T COG4947 102 STIVSGCSMGAY----HAANFVFRHP-HLFTKVIALSGVY 136 (227)
T ss_pred Cccccccchhhh----hhhhhheeCh-hHhhhheeeccee
Confidence 378999999995 4444444444 2223344444543
No 160
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=27.94 E-value=1.2e+02 Score=29.11 Aligned_cols=44 Identities=30% Similarity=0.382 Sum_probs=28.4
Q ss_pred EEEehHHHHHHHHHHHHHcCCCCcCeEEEeecChhHHHHHHhHHHHHHhCC
Q 022081 51 LFFRGQLIWEALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHCDDFRERLP 101 (303)
Q Consensus 51 l~frG~~i~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~d~~~~~lp 101 (303)
..=+|..+...|-+-|. ...|++|.|.|+|+||+-+. ++...++
T Consensus 106 ~~~~~~ql~~~V~~~l~---~~ga~~v~LigHS~GG~~~r----y~~~~~~ 149 (336)
T COG1075 106 LAVRGEQLFAYVDEVLA---KTGAKKVNLIGHSMGGLDSR----YYLGVLG 149 (336)
T ss_pred ccccHHHHHHHHHHHHh---hcCCCceEEEeecccchhhH----HHHhhcC
Confidence 33444444444443333 35679999999999998877 5555555
No 161
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=27.47 E-value=72 Score=27.70 Aligned_cols=21 Identities=29% Similarity=0.279 Sum_probs=16.3
Q ss_pred cCeEEEeecChhHHHHHHhHH
Q 022081 74 AKQAFLTGCSAGGLAAVIHCD 94 (303)
Q Consensus 74 a~~v~lsG~SAGG~g~~~~~d 94 (303)
.++++|.|.|.||.=++..+-
T Consensus 95 ~~~~~liG~S~Gg~ia~~~a~ 115 (288)
T TIGR01250 95 LDKFYLLGHSWGGMLAQEYAL 115 (288)
T ss_pred CCcEEEEEeehHHHHHHHHHH
Confidence 356999999999986666443
No 162
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=27.37 E-value=1.7e+02 Score=26.67 Aligned_cols=25 Identities=24% Similarity=0.438 Sum_probs=17.8
Q ss_pred eEEEeecChhHHHHHHhHHHHHHhC
Q 022081 76 QAFLTGCSAGGLAAVIHCDDFRERL 100 (303)
Q Consensus 76 ~v~lsG~SAGG~g~~~~~d~~~~~l 100 (303)
.+.|+|+|=||.=|.+-+-.+.+.+
T Consensus 85 ~i~v~GHSkGGnLA~yaa~~~~~~~ 109 (224)
T PF11187_consen 85 KIYVTGHSKGGNLAQYAAANCDDEI 109 (224)
T ss_pred CEEEEEechhhHHHHHHHHHccHHH
Confidence 5999999999976665555544333
No 163
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=27.13 E-value=63 Score=30.00 Aligned_cols=15 Identities=27% Similarity=0.348 Sum_probs=13.1
Q ss_pred CcCeEEEeecChhHH
Q 022081 73 NAKQAFLTGCSAGGL 87 (303)
Q Consensus 73 ~a~~v~lsG~SAGG~ 87 (303)
.-.+++|.|+|.|++
T Consensus 82 ~~~~liLiGHSIGay 96 (266)
T PF10230_consen 82 PNVKLILIGHSIGAY 96 (266)
T ss_pred CCCcEEEEeCcHHHH
Confidence 567899999999985
No 164
>PHA02857 monoglyceride lipase; Provisional
Probab=27.08 E-value=1.1e+02 Score=27.38 Aligned_cols=20 Identities=25% Similarity=0.449 Sum_probs=15.9
Q ss_pred cCeEEEeecChhHHHHHHhH
Q 022081 74 AKQAFLTGCSAGGLAAVIHC 93 (303)
Q Consensus 74 a~~v~lsG~SAGG~g~~~~~ 93 (303)
.+.++|.|.|.||.=++..+
T Consensus 96 ~~~~~lvG~S~GG~ia~~~a 115 (276)
T PHA02857 96 GVPVFLLGHSMGATISILAA 115 (276)
T ss_pred CCCEEEEEcCchHHHHHHHH
Confidence 45799999999998666544
No 165
>PRK03204 haloalkane dehalogenase; Provisional
Probab=27.02 E-value=1.2e+02 Score=27.71 Aligned_cols=34 Identities=12% Similarity=0.187 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHcCCCCcCeEEEeecChhHHHHHHhH
Q 022081 58 IWEALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHC 93 (303)
Q Consensus 58 i~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~ 93 (303)
-+.+.+.+++++ + +.++++|.|+|.||.=++..+
T Consensus 86 ~~~~~~~~~~~~-~-~~~~~~lvG~S~Gg~va~~~a 119 (286)
T PRK03204 86 EHARVIGEFVDH-L-GLDRYLSMGQDWGGPISMAVA 119 (286)
T ss_pred HHHHHHHHHHHH-h-CCCCEEEEEECccHHHHHHHH
Confidence 445555555542 2 336799999999997554443
No 166
>PRK13690 hypothetical protein; Provisional
Probab=26.99 E-value=81 Score=28.23 Aligned_cols=28 Identities=29% Similarity=0.451 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHcCCCCcCeEEEeecCh
Q 022081 57 LIWEALMDELLSVGMSNAKQAFLTGCSA 84 (303)
Q Consensus 57 ~i~~avl~~L~~~g~~~a~~v~lsG~SA 84 (303)
.-++.++++|++..--++.++++.|||-
T Consensus 8 ~~~~~~~~El~~~a~l~~g~i~VvGcST 35 (184)
T PRK13690 8 KQTRQILEELLEQANLKPGQIFVLGCST 35 (184)
T ss_pred HHHHHHHHHHHHhhCCCCCCEEEEecch
Confidence 3577889999986555677899999984
No 167
>TIGR01440 conserved hypothetical protein TIGR01440. Members of this family are uncharacterized proteins of about 180 amino acids from the Bacillus/Clostridium group of Gram-positive bacteria, found in no more than one copy per genome.
Probab=26.64 E-value=69 Score=28.37 Aligned_cols=26 Identities=23% Similarity=0.480 Sum_probs=20.4
Q ss_pred HHHHHHHHHHcCCCCcCeEEEeecCh
Q 022081 59 WEALMDELLSVGMSNAKQAFLTGCSA 84 (303)
Q Consensus 59 ~~avl~~L~~~g~~~a~~v~lsG~SA 84 (303)
++.++++|++...-++.++++.|||-
T Consensus 3 ~~~~~~El~~~a~l~~g~i~VvGcST 28 (172)
T TIGR01440 3 LTTVLEELKDASNLKKGDLFVIGCST 28 (172)
T ss_pred HHHHHHHHHHhhCCCCCCEEEEecch
Confidence 67889999986555677899999984
No 168
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=25.64 E-value=1e+02 Score=29.78 Aligned_cols=67 Identities=19% Similarity=0.235 Sum_probs=37.6
Q ss_pred CceEEEEecCCCcccCCCCCcccCCCceEEEehHHHHHHHHHHHHHc--CCCCcCeEEEeecChhHHHHHHhHHHHHH
Q 022081 23 SWNKVKIRYCDGASFAGRPESEFKNGTNLFFRGQLIWEALMDELLSV--GMSNAKQAFLTGCSAGGLAAVIHCDDFRE 98 (303)
Q Consensus 23 nwn~V~vpYC~Gd~~~G~~~~~~~~~~~l~frG~~i~~avl~~L~~~--g~~~a~~v~lsG~SAGG~g~~~~~d~~~~ 98 (303)
+|..|-+.-.+ +|.|-..... =|=..-+.+++++|... |..+.++|+|.|+|=|.--++.+......
T Consensus 63 ~wsl~q~~LsS--Sy~G~G~~SL-------~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~ 131 (303)
T PF08538_consen 63 GWSLFQVQLSS--SYSGWGTSSL-------DRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNP 131 (303)
T ss_dssp T-EEEEE--GG--GBTTS-S--H-------HHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT
T ss_pred CeEEEEEEecC--ccCCcCcchh-------hhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCc
Confidence 78888777544 4444332110 01134678889999874 44578999999999999888877665553
No 169
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=25.35 E-value=3e+02 Score=22.67 Aligned_cols=38 Identities=26% Similarity=0.294 Sum_probs=25.8
Q ss_pred cCeEEEeecChhHHHHHHhHHHHHHhCCCCcEEEEeecC
Q 022081 74 AKQAFLTGCSAGGLAAVIHCDDFRERLPQHATVKCLADA 112 (303)
Q Consensus 74 a~~v~lsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~Ds 112 (303)
...++|.|.|.||.-++.-+-.+.+.-. .+.-..+.|+
T Consensus 63 ~~~~~l~g~s~Gg~~a~~~a~~l~~~~~-~~~~l~~~~~ 100 (212)
T smart00824 63 GRPFVLVGHSSGGLLAHAVAARLEARGI-PPAAVVLLDT 100 (212)
T ss_pred CCCeEEEEECHHHHHHHHHHHHHHhCCC-CCcEEEEEcc
Confidence 4568999999999998877777765422 2333355554
No 170
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=25.21 E-value=66 Score=30.84 Aligned_cols=36 Identities=25% Similarity=0.284 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHcCCC---------CcCeEEEeecChhHHHHHHhHH
Q 022081 58 IWEALMDELLSVGMS---------NAKQAFLTGCSAGGLAAVIHCD 94 (303)
Q Consensus 58 i~~avl~~L~~~g~~---------~a~~v~lsG~SAGG~g~~~~~d 94 (303)
-..+|++||.. ||. +-+++.|+|+|-||-.|+.-+=
T Consensus 95 ~aa~V~~WL~~-gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlAL 139 (307)
T PF07224_consen 95 SAASVINWLPE-GLQHVLPENVEANLSKLALSGHSRGGKTAFALAL 139 (307)
T ss_pred HHHHHHHHHHh-hhhhhCCCCcccccceEEEeecCCccHHHHHHHh
Confidence 45677888874 432 5678999999999987765443
No 171
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=24.49 E-value=98 Score=29.71 Aligned_cols=45 Identities=16% Similarity=0.279 Sum_probs=31.2
Q ss_pred hHHHHHHHHHHHHHcCCCCcC--eEEEeecChhHHHHHHhHHHHHHhCC
Q 022081 55 GQLIWEALMDELLSVGMSNAK--QAFLTGCSAGGLAAVIHCDDFRERLP 101 (303)
Q Consensus 55 G~~i~~avl~~L~~~g~~~a~--~v~lsG~SAGG~g~~~~~d~~~~~lp 101 (303)
|..-+++|-+++. .|+..+ +++|.|-|-|++|+---.+.+.++..
T Consensus 89 ~~aL~~aV~~~~~--~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~ 135 (289)
T PF10081_consen 89 ARALFEAVYARWS--TLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRD 135 (289)
T ss_pred HHHHHHHHHHHHH--hCCcccCCeEEEeccCccccchhhhhccHHHhhh
Confidence 3445555555554 476553 79999999999997776666666654
No 172
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=24.40 E-value=1.8e+02 Score=22.71 Aligned_cols=34 Identities=26% Similarity=0.317 Sum_probs=24.5
Q ss_pred cCeEEEeecChhHHHHHHhHHHHHHhCCCCcEEEEeecCc
Q 022081 74 AKQAFLTGCSAGGLAAVIHCDDFRERLPQHATVKCLADAS 113 (303)
Q Consensus 74 a~~v~lsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG 113 (303)
-++|+|.|. |..|+ -.++.++..+++|.+++..-
T Consensus 7 ~~~vlVvGg--G~va~----~k~~~Ll~~gA~v~vis~~~ 40 (103)
T PF13241_consen 7 GKRVLVVGG--GPVAA----RKARLLLEAGAKVTVISPEI 40 (103)
T ss_dssp T-EEEEEEE--SHHHH----HHHHHHCCCTBEEEEEESSE
T ss_pred CCEEEEECC--CHHHH----HHHHHHHhCCCEEEEECCch
Confidence 356777776 44333 78888999899999998754
No 173
>PLN02511 hydrolase
Probab=24.32 E-value=1e+02 Score=30.12 Aligned_cols=36 Identities=14% Similarity=0.086 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHcCCCCcCeEEEeecChhHHHHHHhH
Q 022081 56 QLIWEALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHC 93 (303)
Q Consensus 56 ~~i~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~ 93 (303)
..-+++++++|..+ +++ .++++.|.|.||.-++..+
T Consensus 156 ~~Dl~~~i~~l~~~-~~~-~~~~lvG~SlGg~i~~~yl 191 (388)
T PLN02511 156 TGDLRQVVDHVAGR-YPS-ANLYAAGWSLGANILVNYL 191 (388)
T ss_pred hHHHHHHHHHHHHH-CCC-CCEEEEEechhHHHHHHHH
Confidence 34677888888753 443 4799999999997665544
No 174
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=24.20 E-value=2.5e+02 Score=27.22 Aligned_cols=80 Identities=21% Similarity=0.334 Sum_probs=45.7
Q ss_pred EEEecCCCcccCCCCCccc---------CCCceEEEehHH---HHHHHHHHHHHcCCCC--cCeEEEeecChhHHHHHHh
Q 022081 27 VKIRYCDGASFAGRPESEF---------KNGTNLFFRGQL---IWEALMDELLSVGMSN--AKQAFLTGCSAGGLAAVIH 92 (303)
Q Consensus 27 V~vpYC~Gd~~~G~~~~~~---------~~~~~l~frG~~---i~~avl~~L~~~g~~~--a~~v~lsG~SAGG~g~~~~ 92 (303)
.||==|||-+|.|+...+- ..+..+.|.=-. -++.-++.....|+.+ .++++ +||...
T Consensus 24 tfifDcDGVlW~g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~~v~e~~i~---ssa~~~----- 95 (306)
T KOG2882|consen 24 TFIFDCDGVLWLGEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFNSVKEENIF---SSAYAI----- 95 (306)
T ss_pred EEEEcCCcceeecCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCccccCccccc---ChHHHH-----
Confidence 4667899999999887541 013334433222 2233334344446652 33444 455554
Q ss_pred HHHHHHhCCCCcEEEEeecCcc
Q 022081 93 CDDFRERLPQHATVKCLADASF 114 (303)
Q Consensus 93 ~d~~~~~lp~~~~v~~l~DsG~ 114 (303)
++++++..|...+|+++.-.|+
T Consensus 96 a~ylk~~~~~~k~Vyvig~~gi 117 (306)
T KOG2882|consen 96 ADYLKKRKPFGKKVYVIGEEGI 117 (306)
T ss_pred HHHHHHhCcCCCeEEEecchhh
Confidence 4666666676788998877764
No 175
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=24.14 E-value=1e+02 Score=33.81 Aligned_cols=19 Identities=32% Similarity=0.483 Sum_probs=15.8
Q ss_pred CCCcCeEEEeecChhHHHH
Q 022081 71 MSNAKQAFLTGCSAGGLAA 89 (303)
Q Consensus 71 ~~~a~~v~lsG~SAGG~g~ 89 (303)
.+.++.|+|.|+|.||+=|
T Consensus 178 ~p~P~sVILVGHSMGGiVA 196 (973)
T KOG3724|consen 178 SPLPHSVILVGHSMGGIVA 196 (973)
T ss_pred CCCCceEEEEeccchhHHH
Confidence 4568999999999999753
No 176
>PRK11761 cysM cysteine synthase B; Provisional
Probab=24.13 E-value=91 Score=29.42 Aligned_cols=37 Identities=22% Similarity=0.261 Sum_probs=26.5
Q ss_pred CeEEEeecChhHHHHHHhHHHHHHhCCCCcEEEEeecCcc
Q 022081 75 KQAFLTGCSAGGLAAVIHCDDFRERLPQHATVKCLADASF 114 (303)
Q Consensus 75 ~~v~lsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~ 114 (303)
+.+++-++||.++++.+.. ++.++.+.-|.+++|+|.
T Consensus 250 ~gi~ve~ssga~laaa~~~---~~~~~~~~vV~v~~d~g~ 286 (296)
T PRK11761 250 EGIFCGVSSGGAVAAALRI---ARENPNAVIVAIICDRGD 286 (296)
T ss_pred hCceEchhHHHHHHHHHHH---HHHCCCCeEEEEECCCCc
Confidence 4567777888888888763 344665556788899993
No 177
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=24.12 E-value=1.8e+02 Score=28.90 Aligned_cols=54 Identities=20% Similarity=0.239 Sum_probs=34.3
Q ss_pred HHHHHHHHHHcCCCCcCeEEEeecChhHHHHHHhHHHHHHhCCCCcEEEEeecCccccCCC
Q 022081 59 WEALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHCDDFRERLPQHATVKCLADASFFLDES 119 (303)
Q Consensus 59 ~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~fld~~ 119 (303)
++.+=+|-...|+. +.+|.|+|-||+=+..++ -.+|+.++=.+|+|..=|-..+
T Consensus 147 vesiE~WR~~~~L~---KmilvGHSfGGYLaa~YA----lKyPerV~kLiLvsP~Gf~~~~ 200 (365)
T KOG4409|consen 147 VESIEQWRKKMGLE---KMILVGHSFGGYLAAKYA----LKYPERVEKLILVSPWGFPEKP 200 (365)
T ss_pred HHHHHHHHHHcCCc---ceeEeeccchHHHHHHHH----HhChHhhceEEEecccccccCC
Confidence 44444444444555 799999999997655443 3456666667777764454444
No 178
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=23.80 E-value=1.7e+02 Score=29.31 Aligned_cols=78 Identities=18% Similarity=0.253 Sum_probs=47.8
Q ss_pred eEEEehHHHHHHHHHHHHH-cCCCCcCeEEEeecChhHHHHHHhHHHHHHhCCCCcEEEEeecCccccCCCCCccchhhH
Q 022081 50 NLFFRGQLIWEALMDELLS-VGMSNAKQAFLTGCSAGGLAAVIHCDDFRERLPQHATVKCLADASFFLDESDVQGNRTMR 128 (303)
Q Consensus 50 ~l~frG~~i~~avl~~L~~-~g~~~a~~v~lsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~fld~~~~~g~~~~~ 128 (303)
..-+.-....+||+..... -|++ .+.|||-|.|-||+-+. +.+..+| +++- ++-|+-| =|.-+. .-.-|+
T Consensus 286 P~p~n~~nA~DaVvQfAI~~Lgf~-~edIilygWSIGGF~~~----waAs~YP-dVka-vvLDAtF-DDllpL-Al~rMP 356 (517)
T KOG1553|consen 286 PYPVNTLNAADAVVQFAIQVLGFR-QEDIILYGWSIGGFPVA----WAASNYP-DVKA-VVLDATF-DDLLPL-ALFRMP 356 (517)
T ss_pred CCcccchHHHHHHHHHHHHHcCCC-ccceEEEEeecCCchHH----HHhhcCC-CceE-EEeecch-hhhhhH-Hhhhch
Confidence 3345556677888887775 2454 67899999999997664 5667788 5543 2336643 222211 123456
Q ss_pred HHhhhhhh
Q 022081 129 SFYDDVFH 136 (303)
Q Consensus 129 ~~~~~~~~ 136 (303)
.+|.++|+
T Consensus 357 ~~~~giV~ 364 (517)
T KOG1553|consen 357 TFFSGIVE 364 (517)
T ss_pred HHHHHHHH
Confidence 67777655
No 179
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=23.77 E-value=1.5e+02 Score=27.95 Aligned_cols=41 Identities=27% Similarity=0.310 Sum_probs=27.7
Q ss_pred CcCeEEEeecChhHHHHHHhHHHHHHhCCCCcEEEEeecCccccCCC
Q 022081 73 NAKQAFLTGCSAGGLAAVIHCDDFRERLPQHATVKCLADASFFLDES 119 (303)
Q Consensus 73 ~a~~v~lsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~fld~~ 119 (303)
.-..++|.|+|+||+=++.....-. .+|..+.=|+.++...
T Consensus 105 ~~~p~~l~gHSmGg~Ia~~~~~~~~------~~i~~~vLssP~~~l~ 145 (298)
T COG2267 105 PGLPVFLLGHSMGGLIALLYLARYP------PRIDGLVLSSPALGLG 145 (298)
T ss_pred CCCCeEEEEeCcHHHHHHHHHHhCC------ccccEEEEECccccCC
Confidence 3468999999999987776655444 3355555556666554
No 180
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=23.64 E-value=1.7e+02 Score=27.62 Aligned_cols=34 Identities=18% Similarity=0.281 Sum_probs=20.7
Q ss_pred eEEEeecChhHHHHHHhHHHHHHhCCCCcEEEEeecCc
Q 022081 76 QAFLTGCSAGGLAAVIHCDDFRERLPQHATVKCLADAS 113 (303)
Q Consensus 76 ~v~lsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG 113 (303)
.++|.|.|.||.=++..+- ..|..++-.++.+++
T Consensus 139 ~~~lvG~SmGG~vA~~~A~----~~P~~V~~LvLi~s~ 172 (343)
T PRK08775 139 LHAFVGYSYGALVGLQFAS----RHPARVRTLVVVSGA 172 (343)
T ss_pred ceEEEEECHHHHHHHHHHH----HChHhhheEEEECcc
Confidence 3579999999976655443 334333344455654
No 181
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=23.62 E-value=4.2e+02 Score=27.45 Aligned_cols=93 Identities=20% Similarity=0.198 Sum_probs=54.2
Q ss_pred CCCCCCCCCc--CceEEEE--ecCCCcccC-CCCCcccCCCceEEEeh-----HHHHHHHHHHHHHcCCCCcCeEEEeec
Q 022081 13 SDPSQNPDFF--SWNKVKI--RYCDGASFA-GRPESEFKNGTNLFFRG-----QLIWEALMDELLSVGMSNAKQAFLTGC 82 (303)
Q Consensus 13 ~~~~~NP~f~--nwn~V~v--pYC~Gd~~~-G~~~~~~~~~~~l~frG-----~~i~~avl~~L~~~g~~~a~~v~lsG~ 82 (303)
+....||+=+ +.+.||| |-=||-+.+ |+..+ .-|.| +...+-+++++-. -.....+..|+|.
T Consensus 134 P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~-------~d~~~~~~D~~~~~~~f~~~fp~-~~r~~~~~~L~GE 205 (498)
T COG2939 134 PSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKK-------KDFEGAGKDVYSFLRLFFDKFPH-YARLLSPKFLAGE 205 (498)
T ss_pred CCCCCCccccccCCceEEEecCcccCcccccccccc-------cchhccchhHHHHHHHHHHHHHH-HhhhcCceeEeec
Confidence 3333599322 2468999 566666665 32211 11222 1255666666654 4556678999999
Q ss_pred ChhHHHHHHhHHHHHHh---CCCCcEEEEeec-Cc
Q 022081 83 SAGGLAAVIHCDDFRER---LPQHATVKCLAD-AS 113 (303)
Q Consensus 83 SAGG~g~~~~~d~~~~~---lp~~~~v~~l~D-sG 113 (303)
|-||.=...-+..|.+. +...+.+..+.+ +|
T Consensus 206 SYgg~yip~~A~~L~~~~~~~~~~~nlssvligng 240 (498)
T COG2939 206 SYGGHYIPVFAHELLEDNIALNGNVNLSSVLIGNG 240 (498)
T ss_pred cccchhhHHHHHHHHHhccccCCceEeeeeeecCC
Confidence 99997766666666664 333345555554 34
No 182
>smart00704 ZnF_CDGSH CDGSH-type zinc finger. Function unknown.
Probab=23.37 E-value=32 Score=22.82 Aligned_cols=6 Identities=67% Similarity=1.708 Sum_probs=5.3
Q ss_pred ecCCCc
Q 022081 30 RYCDGA 35 (303)
Q Consensus 30 pYC~Gd 35 (303)
|||||.
T Consensus 26 PfCDGs 31 (38)
T smart00704 26 PYCDGS 31 (38)
T ss_pred CccCCc
Confidence 899986
No 183
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=23.37 E-value=1.2e+02 Score=30.57 Aligned_cols=53 Identities=25% Similarity=0.312 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHc--CCCCcCeEEEeecChhHHHHHHhHHHHHHhCCCCcEEEEeec-Ccccc
Q 022081 57 LIWEALMDELLSV--GMSNAKQAFLTGCSAGGLAAVIHCDDFRERLPQHATVKCLAD-ASFFL 116 (303)
Q Consensus 57 ~i~~avl~~L~~~--g~~~a~~v~lsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~D-sG~fl 116 (303)
+++.|++ +|+.. +++..-.+|+.|+|-||+=+.| .++.-|. .+.++-| ||+-+
T Consensus 165 D~INAl~-~l~k~~~~~~~~lp~I~~G~s~G~yla~l----~~k~aP~--~~~~~iDns~~~~ 220 (403)
T PF11144_consen 165 DIINALL-DLKKIFPKNGGGLPKIYIGSSHGGYLAHL----CAKIAPW--LFDGVIDNSSYAL 220 (403)
T ss_pred HHHHHHH-HHHHhhhcccCCCcEEEEecCcHHHHHHH----HHhhCcc--ceeEEEecCcccc
Confidence 3444444 44432 3333348999999999975544 3334453 3566665 66654
No 184
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=23.10 E-value=1.3e+02 Score=29.70 Aligned_cols=34 Identities=26% Similarity=0.336 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHcCCCCcCeEEEeecChhHHHHHHhH
Q 022081 58 IWEALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHC 93 (303)
Q Consensus 58 i~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~ 93 (303)
-+.++++.|..+ .+ -..++|.|.|.||+-++..+
T Consensus 193 Dl~~~l~~l~~~-~~-~~~i~lvGhSmGG~ial~~a 226 (395)
T PLN02652 193 DTEAFLEKIRSE-NP-GVPCFLFGHSTGGAVVLKAA 226 (395)
T ss_pred HHHHHHHHHHHh-CC-CCCEEEEEECHHHHHHHHHH
Confidence 345566665532 22 23699999999999877544
No 185
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=22.56 E-value=2.9e+02 Score=24.88 Aligned_cols=32 Identities=19% Similarity=0.133 Sum_probs=21.2
Q ss_pred hHHHHHHHHHHHHHcC--CCCcCeEEEeecChhH
Q 022081 55 GQLIWEALMDELLSVG--MSNAKQAFLTGCSAGG 86 (303)
Q Consensus 55 G~~i~~avl~~L~~~g--~~~a~~v~lsG~SAGG 86 (303)
+...++..+++|.... -.+++.|+++|-...+
T Consensus 15 ~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~ 48 (243)
T cd07386 15 LEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDG 48 (243)
T ss_pred hHHHHHHHHHHHcCCcccccCccEEEEeCCcccc
Confidence 3456677777775310 1257999999987765
No 186
>COG0431 Predicted flavoprotein [General function prediction only]
Probab=22.27 E-value=85 Score=27.46 Aligned_cols=52 Identities=21% Similarity=0.251 Sum_probs=36.5
Q ss_pred ceEEEehHH-HHHHHHHHHHHcCCCCcCeEEEeecChhHHHHHHhHHHHHHhCC
Q 022081 49 TNLFFRGQL-IWEALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHCDDFRERLP 101 (303)
Q Consensus 49 ~~l~frG~~-i~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~d~~~~~lp 101 (303)
+..|+.|.- .++.+||||-...+ .-+.|++.|.|-|+.|++.....+|..+.
T Consensus 75 tPeYn~s~pg~lKnaiD~l~~~~~-~~Kpv~~~~~s~g~~~~~~a~~~Lr~vl~ 127 (184)
T COG0431 75 TPEYNGSYPGALKNAIDWLSREAL-GGKPVLLLGTSGGGAGGLRAQNQLRPVLS 127 (184)
T ss_pred CCccCCCCCHHHHHHHHhCCHhHh-CCCcEEEEecCCCchhHHHHHHHHHHHHH
Confidence 455655543 89999999876422 34667778888888888777777777664
No 187
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=22.26 E-value=1.9e+02 Score=28.42 Aligned_cols=60 Identities=22% Similarity=0.199 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHH-------c-CCCCcCeEEEeecChhHHHHHHhHHHHHHhCCCCcEEEEeecCccccCCCCC
Q 022081 57 LIWEALMDELLS-------V-GMSNAKQAFLTGCSAGGLAAVIHCDDFRERLPQHATVKCLADASFFLDESDV 121 (303)
Q Consensus 57 ~i~~avl~~L~~-------~-g~~~a~~v~lsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~fld~~~~ 121 (303)
+..+.+|+||.. + ......++|+.|+|-|| .-+-++|..+| +.-.-.++-|+...-..+.
T Consensus 87 Lt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G----~Laaw~r~kyP-~~~~ga~ASSapv~a~~df 154 (434)
T PF05577_consen 87 LTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGG----ALAAWFRLKYP-HLFDGAWASSAPVQAKVDF 154 (434)
T ss_dssp -SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHH----HHHHHHHHH-T-TT-SEEEEET--CCHCCTT
T ss_pred cCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchh----HHHHHHHhhCC-CeeEEEEeccceeeeeccc
Confidence 455555555543 1 12233468888888777 45567889999 4545666777766544443
No 188
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=22.16 E-value=1.1e+02 Score=27.95 Aligned_cols=37 Identities=16% Similarity=0.048 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHcCCCCcCeEEEeecChhHHHHHHhHH
Q 022081 57 LIWEALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHCD 94 (303)
Q Consensus 57 ~i~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~d 94 (303)
.-..++|+||..+-..+ -+|-+.|.|.+|..+++-+.
T Consensus 84 ~D~~d~I~W~~~Qpws~-G~VGm~G~SY~G~~q~~~A~ 120 (272)
T PF02129_consen 84 QDGYDTIEWIAAQPWSN-GKVGMYGISYGGFTQWAAAA 120 (272)
T ss_dssp HHHHHHHHHHHHCTTEE-EEEEEEEETHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCCC-CeEEeeccCHHHHHHHHHHh
Confidence 35678899998752222 48999999999987765443
No 189
>PRK04123 ribulokinase; Provisional
Probab=21.92 E-value=1.9e+02 Score=29.61 Aligned_cols=71 Identities=18% Similarity=0.251 Sum_probs=41.6
Q ss_pred EEEEecCCCcccCCCCCcc-cCC------CceEEEehHHHHHHHHH-----------HHHHcCCCCcCeEEEeecChhH-
Q 022081 26 KVKIRYCDGASFAGRPESE-FKN------GTNLFFRGQLIWEALMD-----------ELLSVGMSNAKQAFLTGCSAGG- 86 (303)
Q Consensus 26 ~V~vpYC~Gd~~~G~~~~~-~~~------~~~l~frG~~i~~avl~-----------~L~~~g~~~a~~v~lsG~SAGG- 86 (303)
.+|+|| +.|.+.+. +++ +.++.+.=..+++|||+ .|.+.|. ..++|+++| ||
T Consensus 379 l~f~P~-----l~Ger~P~~~~~arg~~~Gl~~~~~~~~l~RAvlEgia~~~~~~~e~l~~~g~-~~~~i~~~G---Gg~ 449 (548)
T PRK04123 379 LVALDW-----FNGRRTPLADQRLKGVITGLTLGTDAPDIYRALIEATAFGTRAIMECFEDQGV-PVEEVIAAG---GIA 449 (548)
T ss_pred eEEccc-----ccCCCCCCCCCCCceEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCC-CcceEEEeC---CCc
Confidence 589999 45655432 111 22333443456666644 3332233 467888888 55
Q ss_pred HHHHHhHHHHHHhCCCCcE
Q 022081 87 LAAVIHCDDFRERLPQHAT 105 (303)
Q Consensus 87 ~g~~~~~d~~~~~lp~~~~ 105 (303)
--.-++.+-+++.+...+.
T Consensus 450 s~s~~w~Qi~ADv~g~pV~ 468 (548)
T PRK04123 450 RKNPVLMQIYADVLNRPIQ 468 (548)
T ss_pred ccCHHHHHHHHHhcCCceE
Confidence 4567888999999864443
No 190
>PF13173 AAA_14: AAA domain
Probab=21.87 E-value=1e+02 Score=24.74 Aligned_cols=28 Identities=32% Similarity=0.447 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHcCCCCcCeEEEeecChhHH
Q 022081 58 IWEALMDELLSVGMSNAKQAFLTGCSAGGL 87 (303)
Q Consensus 58 i~~avl~~L~~~g~~~a~~v~lsG~SAGG~ 87 (303)
.|...++.|..++ .--++++||+|++.+
T Consensus 75 ~~~~~lk~l~d~~--~~~~ii~tgS~~~~l 102 (128)
T PF13173_consen 75 DWEDALKFLVDNG--PNIKIILTGSSSSLL 102 (128)
T ss_pred cHHHHHHHHHHhc--cCceEEEEccchHHH
Confidence 5666677777643 335899999999986
No 191
>PRK06489 hypothetical protein; Provisional
Probab=21.78 E-value=2.1e+02 Score=27.20 Aligned_cols=19 Identities=32% Similarity=0.510 Sum_probs=14.1
Q ss_pred CeE-EEeecChhHHHHHHhH
Q 022081 75 KQA-FLTGCSAGGLAAVIHC 93 (303)
Q Consensus 75 ~~v-~lsG~SAGG~g~~~~~ 93 (303)
+++ +|.|.|.||.=++..+
T Consensus 153 ~~~~~lvG~SmGG~vAl~~A 172 (360)
T PRK06489 153 KHLRLILGTSMGGMHAWMWG 172 (360)
T ss_pred CceeEEEEECHHHHHHHHHH
Confidence 445 6999999997666544
No 192
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=21.67 E-value=2.1e+02 Score=27.64 Aligned_cols=36 Identities=25% Similarity=0.328 Sum_probs=21.8
Q ss_pred Ce-EEEeecChhHHHHHHhHHHHHHhCCCCcEEEEeecCcc
Q 022081 75 KQ-AFLTGCSAGGLAAVIHCDDFRERLPQHATVKCLADASF 114 (303)
Q Consensus 75 ~~-v~lsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~ 114 (303)
++ ++|.|.|.||.=++..+.. .|..++-.++.|++.
T Consensus 146 ~~~~~lvG~S~Gg~ia~~~a~~----~p~~v~~lvl~~~~~ 182 (379)
T PRK00175 146 TRLAAVVGGSMGGMQALEWAID----YPDRVRSALVIASSA 182 (379)
T ss_pred CCceEEEEECHHHHHHHHHHHh----ChHhhhEEEEECCCc
Confidence 44 5899999999766655544 343333344445544
No 193
>PRK07581 hypothetical protein; Validated
Probab=21.49 E-value=1.7e+02 Score=27.41 Aligned_cols=26 Identities=15% Similarity=0.285 Sum_probs=18.1
Q ss_pred Ce-EEEeecChhHHHHHHhHHHHHHhC
Q 022081 75 KQ-AFLTGCSAGGLAAVIHCDDFRERL 100 (303)
Q Consensus 75 ~~-v~lsG~SAGG~g~~~~~d~~~~~l 100 (303)
++ ++|.|.|.||.=++..+-.--+++
T Consensus 123 ~~~~~lvG~S~GG~va~~~a~~~P~~V 149 (339)
T PRK07581 123 ERLALVVGWSMGAQQTYHWAVRYPDMV 149 (339)
T ss_pred CceEEEEEeCHHHHHHHHHHHHCHHHH
Confidence 45 689999999988776554433333
No 194
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=21.06 E-value=84 Score=33.99 Aligned_cols=28 Identities=18% Similarity=0.353 Sum_probs=22.1
Q ss_pred HHHHHHcCCCCcCeEEEeecChhHHHHH
Q 022081 63 MDELLSVGMSNAKQAFLTGCSAGGLAAV 90 (303)
Q Consensus 63 l~~L~~~g~~~a~~v~lsG~SAGG~g~~ 90 (303)
.+.+++.++-++++|.+.|.|.||+-+.
T Consensus 596 ~~~~~~~~~iD~~ri~i~GwSyGGy~t~ 623 (755)
T KOG2100|consen 596 VKKVLKLPFIDRSRVAIWGWSYGGYLTL 623 (755)
T ss_pred HHHHHhcccccHHHeEEeccChHHHHHH
Confidence 3444555788999999999999998654
No 195
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=21.06 E-value=2.8e+02 Score=27.66 Aligned_cols=77 Identities=17% Similarity=0.111 Sum_probs=43.0
Q ss_pred CceEEEEecCCCcccCCCCCcccCCCceEEEehHHHHHHHHHHHHHcCCCCcCeEEEeec---------------ChhHH
Q 022081 23 SWNKVKIRYCDGASFAGRPESEFKNGTNLFFRGQLIWEALMDELLSVGMSNAKQAFLTGC---------------SAGGL 87 (303)
Q Consensus 23 nwn~V~vpYC~Gd~~~G~~~~~~~~~~~l~frG~~i~~avl~~L~~~g~~~a~~v~lsG~---------------SAGG~ 87 (303)
+|..++||=..|.+--|+.-.. -.=-=..|+..+.+.|.++.| .-++|++||. |.|++
T Consensus 144 ~~G~~ii~P~~g~la~~~~g~g------r~~~~~~I~~~~~~~~~~~~l-~gk~vlITgG~T~E~ID~VR~isN~SSG~~ 216 (399)
T PRK05579 144 SRGVEIIGPASGRLACGDVGPG------RMAEPEEIVAAAERALSPKDL-AGKRVLITAGPTREPIDPVRYITNRSSGKM 216 (399)
T ss_pred HCCCEEECCCCccccCCCcCCC------CCCCHHHHHHHHHHHhhhccc-CCCEEEEeCCCccccccceeeeccCCcchH
Confidence 4566666665555444432210 000013466666665544344 3478999999 99988
Q ss_pred HHHHhHHHHHHhCCCCcEEEEee
Q 022081 88 AAVIHCDDFRERLPQHATVKCLA 110 (303)
Q Consensus 88 g~~~~~d~~~~~lp~~~~v~~l~ 110 (303)
|..+-.. +...+++|.++.
T Consensus 217 G~aiA~~----l~~~Ga~V~~v~ 235 (399)
T PRK05579 217 GYALARA----AARRGADVTLVS 235 (399)
T ss_pred HHHHHHH----HHHCCCEEEEeC
Confidence 7654332 223477887765
No 196
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=21.04 E-value=97 Score=31.03 Aligned_cols=52 Identities=17% Similarity=0.353 Sum_probs=35.2
Q ss_pred HHHHHHHHHcCCCCcC-eEEEeecChhHHHHHHhHHHHHHhCCC----CcEEEEeecCccccCC
Q 022081 60 EALMDELLSVGMSNAK-QAFLTGCSAGGLAAVIHCDDFRERLPQ----HATVKCLADASFFLDE 118 (303)
Q Consensus 60 ~avl~~L~~~g~~~a~-~v~lsG~SAGG~g~~~~~d~~~~~lp~----~~~v~~l~DsG~fld~ 118 (303)
-.|.+.|+.+ +++.+ ++++.|.+-|= -..|..++|. .-....++|||.|+.-
T Consensus 129 i~vv~~Ll~k-yp~VdAklf~gG~~vg~------npKInN~mpgy~~a~ydlvlisDsgI~m~p 185 (431)
T KOG2547|consen 129 IEVVERLLKK-YPNVDAKLFFGGEKVGL------NPKINNMMPGYRAAKYDLVLISDSGIFMKP 185 (431)
T ss_pred HHHHHHHHhh-CCCcceEEEEccccccc------ChhhhccCHHHHHhcCCEEEEecCCeeecC
Confidence 3466778864 66765 67777777774 2556666662 2348899999999853
No 197
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=20.93 E-value=1.7e+02 Score=24.02 Aligned_cols=22 Identities=27% Similarity=0.342 Sum_probs=16.0
Q ss_pred EEEeecChhHHHHHHhHHHHHH
Q 022081 77 AFLTGCSAGGLAAVIHCDDFRE 98 (303)
Q Consensus 77 v~lsG~SAGG~g~~~~~d~~~~ 98 (303)
++|.|.|.||.-++.......+
T Consensus 90 ~~l~G~S~Gg~~~~~~~~~~p~ 111 (282)
T COG0596 90 VVLVGHSMGGAVALALALRHPD 111 (282)
T ss_pred eEEEEecccHHHHHHHHHhcch
Confidence 9999999998766655544433
No 198
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=20.83 E-value=93 Score=26.47 Aligned_cols=53 Identities=13% Similarity=0.024 Sum_probs=31.6
Q ss_pred cCCCcccCCCCCcccCCCceEEEehHHHHHHHHHHHHHcCCCCcCeEEEeecChh
Q 022081 31 YCDGASFAGRPESEFKNGTNLFFRGQLIWEALMDELLSVGMSNAKQAFLTGCSAG 85 (303)
Q Consensus 31 YC~Gd~~~G~~~~~~~~~~~l~frG~~i~~avl~~L~~~g~~~a~~v~lsG~SAG 85 (303)
|+-+|.|.|....... ...-+-+-....+++++.+.+ .+++++.|+++|--..
T Consensus 2 ~~isD~Hlg~~~~~~~-~~~~~~~~~~~~~~~i~~~~~-~~~~~d~vi~~GDl~~ 54 (168)
T cd07390 2 YFTSDTHFGHANILRF-CNRPFDDVEEMDEALIRNWNE-TVGPDDTVYHLGDFSF 54 (168)
T ss_pred eEecccccCCHHHHcc-CCCCCCCHHHHHHHHHHHHhh-hcCCCCEEEEeCCCCC
Confidence 7788999997543210 000000112244667777765 5788999999996543
No 199
>PLN02209 serine carboxypeptidase
Probab=20.30 E-value=3.6e+02 Score=27.17 Aligned_cols=96 Identities=13% Similarity=0.108 Sum_probs=48.7
Q ss_pred CCCCCCc--CceEEEE--ecCCCcccCCCCCcccCCCceEEEehHHHHHHHHHHHHHcCCCC--cCeEEEeecChhHHHH
Q 022081 16 SQNPDFF--SWNKVKI--RYCDGASFAGRPESEFKNGTNLFFRGQLIWEALMDELLSVGMSN--AKQAFLTGCSAGGLAA 89 (303)
Q Consensus 16 ~~NP~f~--nwn~V~v--pYC~Gd~~~G~~~~~~~~~~~l~frG~~i~~avl~~L~~~g~~~--a~~v~lsG~SAGG~g~ 89 (303)
..||+=+ ..|+||| |-=+|-|++.+.... ..+.. ....+++.+..++.. +++ ...+.|+|.|-||.-+
T Consensus 108 ~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~-~~~~~---~a~~~~~fl~~f~~~--~p~~~~~~~yi~GESYaG~yv 181 (437)
T PLN02209 108 VSTTYSWTKTANIIFLDQPVGSGFSYSKTPIER-TSDTS---EVKKIHEFLQKWLIK--HPQFLSNPFYVVGDSYSGMIV 181 (437)
T ss_pred eeCCCchhhcCcEEEecCCCCCCccCCCCCCCc-cCCHH---HHHHHHHHHHHHHHh--CccccCCCEEEEecCcCceeh
Confidence 4588322 2567787 444444443322110 11110 123444454444433 442 3469999999999776
Q ss_pred HHhHHHHHHhCC----CCcEEEEeecCccccC
Q 022081 90 VIHCDDFRERLP----QHATVKCLADASFFLD 117 (303)
Q Consensus 90 ~~~~d~~~~~lp----~~~~v~~l~DsG~fld 117 (303)
..-+.+|.+.-. ....++++.=..-++|
T Consensus 182 P~~a~~i~~~~~~~~~~~inl~Gi~igng~td 213 (437)
T PLN02209 182 PALVHEISKGNYICCNPPINLQGYVLGNPITH 213 (437)
T ss_pred HHHHHHHHhhcccccCCceeeeeEEecCcccC
Confidence 666667655321 1345666553333444
No 200
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=20.30 E-value=1.7e+02 Score=28.02 Aligned_cols=17 Identities=53% Similarity=0.696 Sum_probs=13.8
Q ss_pred CeEEEeecChhHHHHHH
Q 022081 75 KQAFLTGCSAGGLAAVI 91 (303)
Q Consensus 75 ~~v~lsG~SAGG~g~~~ 91 (303)
++++|.|.|.||+-++.
T Consensus 155 ~~~~lvGhS~Gg~ia~~ 171 (360)
T PLN02679 155 KPTVLIGNSVGSLACVI 171 (360)
T ss_pred CCeEEEEECHHHHHHHH
Confidence 57999999999976543
No 201
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=20.29 E-value=1.4e+02 Score=22.25 Aligned_cols=33 Identities=18% Similarity=0.319 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHcCCCCcCeEEEeecC-hhHHHHHHhHHHHHHhC
Q 022081 58 IWEALMDELLSVGMSNAKQAFLTGCS-AGGLAAVIHCDDFRERL 100 (303)
Q Consensus 58 i~~avl~~L~~~g~~~a~~v~lsG~S-AGG~g~~~~~d~~~~~l 100 (303)
.+.+.|+.+.++ .++.+|++|.+ -|+ |.+++.+
T Consensus 19 ~i~~~Ld~~~~~---~~~~~lvhGga~~Ga-------D~iA~~w 52 (71)
T PF10686_consen 19 LIWAALDKVHAR---HPDMVLVHGGAPKGA-------DRIAARW 52 (71)
T ss_pred HHHHHHHHHHHh---CCCEEEEECCCCCCH-------HHHHHHH
Confidence 455667777763 36788999988 665 5555554
No 202
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=20.26 E-value=2.9e+02 Score=25.89 Aligned_cols=32 Identities=25% Similarity=0.256 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHc-C-------CCCcCeEEEeecChhHHH
Q 022081 57 LIWEALMDELLSV-G-------MSNAKQAFLTGCSAGGLA 88 (303)
Q Consensus 57 ~i~~avl~~L~~~-g-------~~~a~~v~lsG~SAGG~g 88 (303)
..++-.++||.-. | -++-.++|++|.|.+|.+
T Consensus 18 ~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~ 57 (257)
T cd07387 18 LSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKST 57 (257)
T ss_pred HHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccc
Confidence 4667778888631 2 122358999999999865
No 203
>PRK09291 short chain dehydrogenase; Provisional
Probab=20.22 E-value=1.2e+02 Score=26.62 Aligned_cols=15 Identities=20% Similarity=0.536 Sum_probs=8.8
Q ss_pred eEEEeecChhHHHHHH
Q 022081 76 QAFLTGCSAGGLAAVI 91 (303)
Q Consensus 76 ~v~lsG~SAGG~g~~~ 91 (303)
+|+++|.| ||+|..+
T Consensus 4 ~vlVtGas-g~iG~~i 18 (257)
T PRK09291 4 TILITGAG-SGFGREV 18 (257)
T ss_pred EEEEeCCC-CHHHHHH
Confidence 56666664 5666544
No 204
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=20.17 E-value=2.9e+02 Score=28.24 Aligned_cols=39 Identities=15% Similarity=0.204 Sum_probs=25.2
Q ss_pred cCeEEEeecChhHHHHHHhHHHHHHhCCCCcEEEEeecCcccc
Q 022081 74 AKQAFLTGCSAGGLAAVIHCDDFRERLPQHATVKCLADASFFL 116 (303)
Q Consensus 74 a~~v~lsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~fl 116 (303)
.+++.|.|.|.||+=++..+. ..|..++-.++.+++.+.
T Consensus 273 ~~k~~LVGhSmGG~iAl~~A~----~~Pe~V~~LVLi~~~~~~ 311 (481)
T PLN03087 273 VKSFHIVAHSLGCILALALAV----KHPGAVKSLTLLAPPYYP 311 (481)
T ss_pred CCCEEEEEECHHHHHHHHHHH----hChHhccEEEEECCCccc
Confidence 467999999999987765443 455434434455665554
No 205
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=20.12 E-value=93 Score=27.79 Aligned_cols=13 Identities=8% Similarity=0.003 Sum_probs=9.6
Q ss_pred CceEEEEecCCCc
Q 022081 23 SWNKVKIRYCDGA 35 (303)
Q Consensus 23 nwn~V~vpYC~Gd 35 (303)
+-+.+|||.-+++
T Consensus 31 ~~~i~~IptAs~~ 43 (212)
T cd03146 31 RPKVLFVPTASGD 43 (212)
T ss_pred CCeEEEECCCCCC
Confidence 3478888888773
No 206
>PRK05855 short chain dehydrogenase; Validated
Probab=20.11 E-value=1.2e+02 Score=30.17 Aligned_cols=18 Identities=22% Similarity=0.375 Sum_probs=14.9
Q ss_pred hcCCCCeeeeccchhHHH
Q 022081 165 KNIRTPVFIVNPAYDFWQ 182 (303)
Q Consensus 165 ~~i~tP~Filns~YD~wQ 182 (303)
.+++.|++|++...|...
T Consensus 230 ~~~~~P~lii~G~~D~~v 247 (582)
T PRK05855 230 RYTDVPVQLIVPTGDPYV 247 (582)
T ss_pred CCccCceEEEEeCCCccc
Confidence 458999999999998753
No 207
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=20.07 E-value=1.2e+02 Score=28.53 Aligned_cols=49 Identities=27% Similarity=0.295 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHcCCCCcCeEEEeecChhHHHHHHhHHHHHHhCCCCcEEEEeecCcc
Q 022081 58 IWEALMDELLSVGMSNAKQAFLTGCSAGGLAAVIHCDDFRERLPQHATVKCLADASF 114 (303)
Q Consensus 58 i~~avl~~L~~~g~~~a~~v~lsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~ 114 (303)
-..+.+.+|.+ -+.+++-++||.++++.+. +++.++.+.-|.+++|+|.
T Consensus 234 e~~~a~~~l~~-----~~gi~~g~ssga~laa~~~---~~~~~~~~~vv~v~~d~g~ 282 (290)
T TIGR01138 234 DAENTMRELAV-----REGIFCGVSSGGAVAAALR---LARELPDAVVVAIICDRGD 282 (290)
T ss_pred HHHHHHHHHHH-----HhCceEcHhHHHHHHHHHH---HHHHCCCCeEEEEECCCCc
Confidence 33344445554 2456677777777877775 3334665556888899993
Done!