BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022084
(303 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q04471|YM04_YEAST Uncharacterized protein YMR114C OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YMR114C PE=1 SV=1
Length = 368
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 128/250 (51%), Gaps = 33/250 (13%)
Query: 13 LLLRFYEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQ 72
L+ ++EWK G KK PY++ +DGR + A +YD E + LYTFTI+T L+
Sbjct: 126 LMSGYFEWKTVGKKKTPYFISRRDGRLMFVAGMYDY---VEKDDLYTFTIITAQGPRELE 182
Query: 73 WLHDRMPVILG-DKESSDAWLNGS----SSSKYDTILKP-YEESDLVWYPVTPAMGKLSF 126
WLH+RMP +L ES DAW++ S+ + +LKP Y+ES L +Y VT +GK +
Sbjct: 183 WLHERMPCVLEPGTESWDAWMDVDKTTWSTEELVKLLKPDYDESKLQFYQVTDDVGKTTN 242
Query: 127 DGPECIKEIPLKTEGKNPISNFFLKKEIKKEQESKMDEKSSFD-ESVKTNLPKRMKGEPI 185
G IK PL E S+ F K K+E + D + D VK + K +KGE +
Sbjct: 243 TGERLIK--PLLKED----SDMFSVKREKEEALLENDNEQGIDNRGVKGD--KSLKGEDV 294
Query: 186 ----KEIKEEPVSGLEEKYSFDTTAQTNLPKSVKDEAVTADDIRTQ----SSVEKGDPDT 237
K +K GL++ + +T LP +E D ++ + S +G+ +
Sbjct: 295 FNQKKSLKRNSYDGLKKN---EEQEETTLP----EEGSIGDRVKREEANLSPKREGNREK 347
Query: 238 KSVASVLSDE 247
+++ ++L ++
Sbjct: 348 RNIVNMLGNQ 357
>sp|Q6P7N4|CC037_XENTR UPF0361 protein C3orf37 homolog OS=Xenopus tropicalis
GN=TGas027m07.1 PE=2 SV=1
Length = 335
Score = 88.6 bits (218), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 19/159 (11%)
Query: 4 MFRALLDFNLLLRFYEWKKDGSKKQPYYVHF-----------------KDGRPLVFAALY 46
+F+ L FYEW++ S+KQPYY++F R L A L+
Sbjct: 114 LFKGKRCVVLADGFYEWQRQNSEKQPYYIYFPQIKAEKSPAEQDITDWNGQRLLTMAGLF 173
Query: 47 DTWQS-SEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILK 105
D W+ + GE LY++T++T SS + W+HDRMP IL E+ WL+ D +
Sbjct: 174 DCWEPPNGGETLYSYTVITVDSSKTMNWIHDRMPAILDGDEAVRKWLDFGEVPTKDALKL 233
Query: 106 PYEESDLVWYPVTPAMGKLSFDGPECIKEIPLKTEGKNP 144
+ ++ ++PV+ + + PEC+ I L T+ K P
Sbjct: 234 IHPIENITYHPVSTVVNNSRNNTPECMAAIIL-TQKKGP 271
>sp|Q6IND6|CC037_XENLA UPF0361 protein C3orf37 homolog OS=Xenopus laevis PE=2 SV=1
Length = 336
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 19/159 (11%)
Query: 4 MFRALLDFNLLLRFYEWKKDGSKKQPYYVHF-----------------KDGRPLVFAALY 46
+F+ L FYEWK+ +KQPYY++F R L A L+
Sbjct: 114 LFKGRRCVVLADGFYEWKRQDGEKQPYYIYFPQIKSEKFPEEQDMMDWNGQRLLTMAGLF 173
Query: 47 DTWQS-SEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILK 105
D W+ S GE LY++T++T SS + +HDRMP IL E+ WL+ S D +
Sbjct: 174 DCWEPPSGGEPLYSYTVITVDSSKTMNCIHDRMPAILDGDEAIRKWLDFGEVSTQDALKL 233
Query: 106 PYEESDLVWYPVTPAMGKLSFDGPECIKEIPLKTEGKNP 144
+ ++ ++PV+ + + ECI + L T+ K P
Sbjct: 234 IHPIENITYHPVSTVVNNSRNNSTECIAAVIL-TQKKGP 271
>sp|O64131|YOQW_BPSPB UPF0361 protein yoqW OS=Bacillus phage SPbeta GN=yoqW PE=3 SV=1
Length = 224
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 66/120 (55%), Gaps = 4/120 (3%)
Query: 17 FYEWKK-DGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWLH 75
FYEWK+ D K P + K FA LY+ W + EG LYT TI+TT + ++ +H
Sbjct: 104 FYEWKRLDPKTKIPMRIKLKSSNLFAFAGLYEKWNTPEGNPLYTCTIITTKPNELMEDIH 163
Query: 76 DRMPVILGDKESSDAWLNGSSSSK--YDTILKPYEESDLVWYPVTPAMGKLSFDGPECIK 133
DRMPVIL D E+ WLN ++ ++L+PY+ D+ Y V+ + + PE I+
Sbjct: 164 DRMPVILTD-ENEKEWLNPKNTDPDYLQSLLQPYDADDMEAYQVSSLVNSPKNNSPELIE 222
>sp|O31916|YOQW_BACSU UPF0361 protein YoqW OS=Bacillus subtilis (strain 168) GN=yoqW PE=3
SV=1
Length = 224
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 66/120 (55%), Gaps = 4/120 (3%)
Query: 17 FYEWKK-DGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWLH 75
FYEWK+ D K P + K FA LY+ W + EG LYT TI+TT + ++ +H
Sbjct: 104 FYEWKRLDPKTKIPMRIKLKSSNLFAFAGLYEKWNTPEGNPLYTCTIITTKPNELMEDIH 163
Query: 76 DRMPVILGDKESSDAWLNGSSSSK--YDTILKPYEESDLVWYPVTPAMGKLSFDGPECIK 133
DRMPVIL D E+ WLN ++ ++L+PY+ D+ Y V+ + + PE I+
Sbjct: 164 DRMPVILTD-ENEKEWLNPKNTDPDYLQSLLQPYDADDMEAYQVSSLVNSPKNNSPELIE 222
>sp|Q5ZJT1|CC037_CHICK UPF0361 protein C3orf37 homolog OS=Gallus gallus GN=RCJMB04_15p13
PE=2 SV=1
Length = 336
Score = 78.2 bits (191), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 75/142 (52%), Gaps = 23/142 (16%)
Query: 17 FYEWKKDGSKKQPYYVHF------------------KDGRPLVFAALYDTWQSSEG-EIL 57
FYEW++ G KQPY+++F + R L A ++D W+ +G E L
Sbjct: 125 FYEWQQRGGGKQPYFIYFPQNKKHPAEEEEDSDEEWRGWRLLTMAGIFDCWEPPKGGEPL 184
Query: 58 YTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDT--ILKPYEESDLVWY 115
YT+TI+T +S + ++H RMP IL E+ + WL+ + + +++P E ++ ++
Sbjct: 185 YTYTIITVDASEDVSFIHHRMPAILDGDEAIEKWLDFAEVPTREAMKLIRPAE--NIAFH 242
Query: 116 PVTPAMGKLSFDGPECIKEIPL 137
PV+ + + D PEC+ I L
Sbjct: 243 PVSTFVNSVRNDTPECLVPIEL 264
>sp|O34915|YOBE_BACSU UPF0361 protein YobE OS=Bacillus subtilis (strain 168) GN=yobE PE=3
SV=1
Length = 219
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 59/105 (56%), Gaps = 4/105 (3%)
Query: 17 FYEWKK-DGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWLH 75
FYEWK+ D K P + K FA LY+ W + EG +LYT TI+T S ++ +H
Sbjct: 104 FYEWKRLDPKTKIPMRIKLKSSNLFAFAGLYEKWNTLEGNLLYTCTIITIKPSELMEDIH 163
Query: 76 DRMPVILGDKESSDAWLNGSSSSK--YDTILKPYEESDLVWYPVT 118
DRMPVIL D E+ WLN ++ ++L PY+ D+ Y V+
Sbjct: 164 DRMPVILTD-ENKKEWLNPKNTDPDYLQSLLLPYDADDMEAYQVS 207
>sp|Q8R1M0|CC037_MOUSE UPF0361 protein C3orf37 homolog OS=Mus musculus PE=2 SV=1
Length = 353
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 70/142 (49%), Gaps = 26/142 (18%)
Query: 17 FYEWKK--DGSKKQPYYVHF------KDG------------------RPLVFAALYDTWQ 50
FYEW++ +++QPY+++F K G R L A ++D W+
Sbjct: 125 FYEWQRCQGTNQRQPYFIYFPQIKTEKSGGNDASDSSDNKEKVWDNWRLLTMAGIFDCWE 184
Query: 51 SSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPYEES 110
+ GE LY+++I+T S L +H RMP IL +E+ WL+ + + + +
Sbjct: 185 APGGECLYSYSIITVDSCRGLSDIHSRMPAILDGEEAVSKWLDFGEVATQEALKLIHPID 244
Query: 111 DLVWYPVTPAMGKLSFDGPECI 132
++ ++PV+P + + PEC+
Sbjct: 245 NITFHPVSPVVNNSRNNTPECL 266
>sp|Q5XIJ1|CC037_RAT UPF0361 protein C3orf37 homolog OS=Rattus norvegicus PE=2 SV=1
Length = 353
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 70/142 (49%), Gaps = 26/142 (18%)
Query: 17 FYEWKK--DGSKKQPYYVHF------KDG------------------RPLVFAALYDTWQ 50
FYEW++ +++QPY+++F K G R L A ++D W+
Sbjct: 125 FYEWQRCQGTNQRQPYFIYFPQSKTEKSGENSGSDSLNNKEEVWDNWRLLTMAGIFDCWE 184
Query: 51 SSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPYEES 110
+GE LY+++I+T S L +H RMP IL +E+ WL+ S + + +
Sbjct: 185 PPKGERLYSYSIITVDSCRGLSDIHSRMPAILDGEEAVSKWLDFGEVSTQEALKLIHPID 244
Query: 111 DLVWYPVTPAMGKLSFDGPECI 132
++ ++PV+P + + PEC+
Sbjct: 245 NITFHPVSPVVNNSRNNTPECL 266
>sp|O34906|YOAM_BACSU UPF0361 protein YoaM OS=Bacillus subtilis (strain 168) GN=yoaM PE=3
SV=1
Length = 227
Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 17 FYEWKK-DGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQWLH 75
FYEWK+ D K P + K FA LY+ W + +G LYT TI+TT + ++ +H
Sbjct: 104 FYEWKRLDSKTKIPMRIKLKSSALFAFAGLYEKWSTHQGYPLYTCTIITTEPNEFMKDIH 163
Query: 76 DRMPVILGDKESSDAWLNGSSSSK--YDTILKPYEESDLVWYPVT 118
DRMPVIL + WLN ++S ++L PY+ D+ Y V+
Sbjct: 164 DRMPVILAHDHEKE-WLNPKNTSPDYLQSLLLPYDADDMEAYQVS 207
>sp|P76318|YEDK_ECOLI Uncharacterized protein YedK OS=Escherichia coli (strain K12)
GN=yedK PE=1 SV=2
Length = 222
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 72/140 (51%), Gaps = 9/140 (6%)
Query: 3 QMFRALLDFNLLLRF----YEWKKDGSKKQPYYVHFKDGRPLVFAALYDTWQSSEGEILY 58
+MF+ L + F +EWKK+G KKQP++++ DG+P+ AA+ T G+
Sbjct: 85 RMFKPLWQHGRAICFADGWFEWKKEGDKKQPFFIYRADGQPIFMAAIGST-PFERGDEAE 143
Query: 59 TFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKP---YEESDLVWY 115
F I+T ++ L +HDR P++L E++ W+ S K + + + W+
Sbjct: 144 GFLIVTAAADQGLVDIHDRRPLVL-SPEAAREWMRQEISGKEASEIAASGCVPANQFSWH 202
Query: 116 PVTPAMGKLSFDGPECIKEI 135
PV+ A+G + G E I+ +
Sbjct: 203 PVSRAVGNVKNQGAELIQPV 222
>sp|Q96FZ2|CC037_HUMAN UPF0361 protein C3orf37 OS=Homo sapiens GN=C3orf37 PE=1 SV=1
Length = 354
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 71/148 (47%), Gaps = 27/148 (18%)
Query: 17 FYEWKK--DGSKKQPYYVHF------KDG------------------RPLVFAALYDTWQ 50
FYEW++ +++QPY+++F K G R L A ++D W+
Sbjct: 125 FYEWQRCQGTNQRQPYFIYFPQIKTEKSGSIGAADSPENWEKVWDNWRLLTMAGIFDCWE 184
Query: 51 SSEG-EILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPYEE 109
EG ++LY++TI+T S L +H RMP IL +E+ WL+ S + + +
Sbjct: 185 PPEGGDVLYSYTIITVDSCKGLSDIHHRMPAILDGEEAVSKWLDFGEVSTQEALKLIHPT 244
Query: 110 SDLVWYPVTPAMGKLSFDGPECIKEIPL 137
++ ++ V+ + + PEC+ + L
Sbjct: 245 ENITFHAVSSVVNNSRNNTPECLAPVDL 272
>sp|Q5NVR0|CC037_PONAB UPF0361 protein C3orf37 homolog OS=Pongo abelii PE=2 SV=1
Length = 354
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 33/186 (17%)
Query: 17 FYEWKK--DGSKKQPYYVHF------KDG------------------RPLVFAALYDTWQ 50
FYEW++ +++QPY+++F K G R L A ++D W+
Sbjct: 125 FYEWQRCQGTNQRQPYFIYFPQIKTEKSGSIGAADSPENWGKVWDNWRLLTMAGIFDCWE 184
Query: 51 SSEG-EILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPYEE 109
EG ++LY++TI+T S L +H RMP IL +E+ WL+ S + + +
Sbjct: 185 PPEGGDVLYSYTIITVDSCKGLSDIHHRMPAILDGEEAVSKWLDFGKVSTQEALKLIHPT 244
Query: 110 SDLVWYPVTPAMGKLSFDGPECIKEI------PLKTEGKNPISNFFLKKEIKKEQESKMD 163
++ ++ V+ + + PEC+ + LK G + +L + K+++SK
Sbjct: 245 ENITFHAVSSVVNNSRNNTPECLAPVDLVVRKELKASGSSQRMLQWLATKSPKKEDSKTP 304
Query: 164 EKSSFD 169
+K D
Sbjct: 305 QKEESD 310
>sp|B8F3E3|SYM_HAEPS Methionine--tRNA ligase OS=Haemophilus parasuis serovar 5 (strain
SH0165) GN=metG PE=3 SV=1
Length = 684
Score = 33.1 bits (74), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 88/201 (43%), Gaps = 28/201 (13%)
Query: 70 ALQWLHDRMPVILGDKESSDAWLNGSSSSKYDT--ILKPYEESDLVWYPVTPAMGK---- 123
A +++ D+ P ++ +E +DA L S + +L Y + PV P + +
Sbjct: 450 ANKYIDDKAPWVIAKEEGTDAELQAVCSMGLELFRVLMSYLK------PVLPKLAERAEA 503
Query: 124 -----LSFDGPECIKEIPLKTEGKNPISNFFLKKEIKKEQESKMDE-KSSFDESVKTNLP 177
L +D PL P + F + E KK+ ++ ++E K+ F ESVK
Sbjct: 504 FLQTELRWDNIGS----PLFAHSIAPFKSLFSRLE-KKQIDAVIEETKALFAESVKAETA 558
Query: 178 KRMKGEPIKEIKEEPVSGLEEKYSFDTTAQTNL--PKSVKDEAVTADDIRTQSSVEKGDP 235
K+ K E K EP++ + + D A+ +L K +K EAV D + ++ GD
Sbjct: 559 KKGKEMTACETKVEPIA---PEITIDDFAKLDLRVAKVLKCEAVPKSDKLLRFELDLGDH 615
Query: 236 DTKSVASVLSDEDTKKELQKR 256
+ + + + +EL+ R
Sbjct: 616 TRQVFSGIKAAYSQPEELEGR 636
>sp|Q92JF7|SCA2_RICCN Putative surface cell antigen sca2 OS=Rickettsia conorii (strain ATCC
VR-613 / Malish 7) GN=sca2 PE=3 SV=1
Length = 1795
Score = 31.2 bits (69), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 15/163 (9%)
Query: 127 DGPECIKEIPLKT-----EGKNPISNFFLKKEIKKEQESKMD--EKSSFDESVKTNLPKR 179
D + IK I L + E K PI F K E+ +E + K + ++ F N +
Sbjct: 866 DTDDAIKRILLSSCKISEELKRPIKLEFNKSELIRELQGKQNPFKQLEFAYINTKNFDQD 925
Query: 180 MKGEPIKEIKEEP-VSGLEEKYSFDTTAQTNLPKSVKDEAVTA--DDIRTQSSVEKGDPD 236
+ G I E+ P + + ++ +F T TNL K++ + A DD+RT ++
Sbjct: 926 IFGNRIDELINNPNILTIVQQATFLTKEDTNLRKTINSDQAQAKLDDLRT--AILSTIKI 983
Query: 237 TKSVASVLSDEDTKKELQKRD---YKEFLADSKPVIDGNNKLE 276
+ + + L D ++++D KEFL + + GNN L+
Sbjct: 984 EELITANLPQHDFIAIVKEKDPELLKEFLKATTLTVTGNNNLD 1026
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.130 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 118,605,884
Number of Sequences: 539616
Number of extensions: 5197241
Number of successful extensions: 17411
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 305
Number of HSP's that attempted gapping in prelim test: 16692
Number of HSP's gapped (non-prelim): 813
length of query: 303
length of database: 191,569,459
effective HSP length: 117
effective length of query: 186
effective length of database: 128,434,387
effective search space: 23888795982
effective search space used: 23888795982
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 61 (28.1 bits)