Query 022085
Match_columns 303
No_of_seqs 270 out of 2083
Neff 7.5
Searched_HMMs 46136
Date Fri Mar 29 07:54:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022085.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022085hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0372 Serine/threonine speci 100.0 2.7E-89 5.9E-94 595.4 19.6 302 1-303 1-303 (303)
2 KOG0373 Serine/threonine speci 100.0 5E-82 1.1E-86 542.5 21.0 302 1-303 4-306 (306)
3 PTZ00239 serine/threonine prot 100.0 6.3E-78 1.4E-82 556.9 31.5 303 1-303 1-303 (303)
4 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 4E-77 8.6E-82 548.4 29.4 285 2-287 1-285 (285)
5 cd07420 MPP_RdgC Drosophila me 100.0 4E-76 8.7E-81 547.5 29.0 281 2-284 6-321 (321)
6 PTZ00480 serine/threonine-prot 100.0 1.9E-75 4.2E-80 542.2 29.7 286 2-289 10-304 (320)
7 cd07416 MPP_PP2B PP2B, metallo 100.0 4.9E-74 1.1E-78 532.8 29.6 286 2-290 2-301 (305)
8 cd07417 MPP_PP5_C PP5, C-termi 100.0 2.7E-74 5.9E-79 535.9 27.7 286 3-290 16-308 (316)
9 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 4E-74 8.7E-79 530.4 27.3 283 2-286 1-292 (293)
10 PTZ00244 serine/threonine-prot 100.0 1.1E-73 2.4E-78 527.0 27.8 281 3-285 4-293 (294)
11 KOG0374 Serine/threonine speci 100.0 5.1E-74 1.1E-78 534.5 23.5 283 3-286 9-303 (331)
12 smart00156 PP2Ac Protein phosp 100.0 5.5E-72 1.2E-76 512.0 27.5 269 16-286 1-270 (271)
13 KOG0371 Serine/threonine prote 100.0 1.5E-72 3.3E-77 493.5 16.3 301 2-303 19-319 (319)
14 cd07418 MPP_PP7 PP7, metalloph 100.0 1.5E-69 3.3E-74 510.7 28.7 286 3-289 12-370 (377)
15 cd07419 MPP_Bsu1_C Arabidopsis 100.0 7.6E-69 1.6E-73 499.9 27.4 271 14-285 19-311 (311)
16 KOG0375 Serine-threonine phosp 100.0 1.1E-70 2.3E-75 500.3 13.6 285 3-289 48-345 (517)
17 KOG0377 Protein serine/threoni 100.0 2.1E-58 4.5E-63 428.6 13.8 286 2-289 120-435 (631)
18 KOG0376 Serine-threonine phosp 100.0 1E-52 2.2E-57 398.0 13.9 286 3-290 170-462 (476)
19 cd00144 MPP_PPP_family phospho 100.0 5.6E-37 1.2E-41 272.5 21.3 214 46-271 1-224 (225)
20 PRK13625 bis(5'-nucleosyl)-tet 100.0 1.6E-27 3.6E-32 215.6 19.6 123 43-167 1-146 (245)
21 cd07425 MPP_Shelphs Shewanella 100.0 1.6E-27 3.5E-32 210.6 15.0 177 46-257 1-197 (208)
22 cd07423 MPP_PrpE Bacillus subt 99.9 1E-25 2.2E-30 202.5 18.7 123 43-167 1-143 (234)
23 cd07421 MPP_Rhilphs Rhilph pho 99.9 1.2E-25 2.6E-30 205.2 18.5 190 43-261 2-283 (304)
24 cd07413 MPP_PA3087 Pseudomonas 99.9 8.5E-26 1.8E-30 201.6 16.8 116 46-164 2-143 (222)
25 PHA02239 putative protein phos 99.9 3.2E-25 6.9E-30 199.2 16.6 175 43-259 1-221 (235)
26 PRK00166 apaH diadenosine tetr 99.9 4.7E-25 1E-29 202.2 17.4 123 43-169 1-129 (275)
27 PRK11439 pphA serine/threonine 99.9 1.5E-24 3.3E-29 192.9 14.1 178 43-259 17-208 (218)
28 cd07422 MPP_ApaH Escherichia c 99.9 1.4E-24 2.9E-29 197.2 12.5 120 45-168 1-126 (257)
29 cd07424 MPP_PrpA_PrpB PrpA and 99.9 1.2E-23 2.6E-28 185.6 17.2 170 43-242 1-184 (207)
30 TIGR00668 apaH bis(5'-nucleosy 99.9 5.1E-24 1.1E-28 194.2 12.9 122 43-168 1-128 (279)
31 PRK09968 serine/threonine-spec 99.9 2.8E-21 6.1E-26 172.0 15.2 116 43-164 15-144 (218)
32 PF00149 Metallophos: Calcineu 99.5 4.6E-13 9.9E-18 109.7 10.7 160 43-237 1-199 (200)
33 cd00841 MPP_YfcE Escherichia c 99.4 2.8E-11 6E-16 101.4 15.3 60 44-115 1-60 (155)
34 PRK09453 phosphodiesterase; Pr 99.3 3.9E-11 8.5E-16 103.6 15.4 69 43-115 1-77 (182)
35 TIGR00040 yfcE phosphoesterase 99.3 1.2E-10 2.5E-15 98.3 15.0 63 43-114 1-64 (158)
36 PF12850 Metallophos_2: Calcin 99.2 1.3E-10 2.8E-15 96.6 12.6 125 43-242 1-125 (156)
37 cd07397 MPP_DevT Myxococcus xa 99.1 3.1E-10 6.6E-15 102.0 10.9 157 44-238 2-208 (238)
38 cd07379 MPP_239FB Homo sapiens 99.1 1.9E-10 4.1E-15 94.4 8.4 118 44-242 1-120 (135)
39 COG0639 ApaH Diadenosine tetra 99.1 2E-10 4.3E-15 93.7 8.2 143 116-260 3-154 (155)
40 cd07388 MPP_Tt1561 Thermus the 99.1 7.4E-09 1.6E-13 92.5 16.6 72 42-114 4-75 (224)
41 cd07394 MPP_Vps29 Homo sapiens 99.0 3.7E-08 8E-13 85.0 16.3 59 44-114 1-65 (178)
42 cd07404 MPP_MS158 Microscilla 98.9 5.4E-09 1.2E-13 88.6 7.2 67 45-114 1-68 (166)
43 cd00838 MPP_superfamily metall 98.9 1.5E-08 3.3E-13 80.2 9.3 117 46-242 1-119 (131)
44 PRK05340 UDP-2,3-diacylglucosa 98.9 8.1E-08 1.8E-12 86.6 14.8 212 43-284 1-239 (241)
45 cd07392 MPP_PAE1087 Pyrobaculu 98.8 9.9E-08 2.2E-12 81.6 13.6 66 45-116 1-67 (188)
46 TIGR01854 lipid_A_lpxH UDP-2,3 98.7 5.5E-08 1.2E-12 87.2 9.9 207 45-276 1-230 (231)
47 COG2129 Predicted phosphoester 98.7 4.8E-07 1E-11 79.8 15.0 211 42-283 3-224 (226)
48 cd07399 MPP_YvnB Bacillus subt 98.7 4.2E-07 9.1E-12 80.6 14.2 193 44-285 2-213 (214)
49 COG0622 Predicted phosphoester 98.6 2E-06 4.3E-11 73.8 15.7 160 43-287 2-167 (172)
50 cd07403 MPP_TTHA0053 Thermus t 98.6 3.1E-07 6.7E-12 75.1 9.7 107 46-242 1-107 (129)
51 cd07400 MPP_YydB Bacillus subt 98.6 5.1E-07 1.1E-11 74.4 10.8 118 45-243 1-130 (144)
52 cd07385 MPP_YkuE_C Bacillus su 98.4 5.7E-07 1.2E-11 79.4 5.8 71 43-115 2-77 (223)
53 cd07395 MPP_CSTP1 Homo sapiens 98.4 3.5E-05 7.7E-10 70.0 17.4 63 216-282 196-259 (262)
54 cd07396 MPP_Nbla03831 Homo sap 98.3 1.7E-05 3.7E-10 72.6 14.9 73 44-116 2-88 (267)
55 PRK11340 phosphodiesterase Yae 98.3 1.1E-06 2.4E-11 80.7 6.8 70 43-114 50-125 (271)
56 PRK11148 cyclic 3',5'-adenosin 98.2 0.00017 3.6E-09 66.3 18.3 71 42-114 14-98 (275)
57 PRK04036 DNA polymerase II sma 98.2 3.8E-05 8.2E-10 76.6 14.8 72 42-115 243-344 (504)
58 cd07402 MPP_GpdQ Enterobacter 98.1 0.00011 2.4E-09 65.4 15.0 67 44-114 1-83 (240)
59 cd07383 MPP_Dcr2 Saccharomyces 98.1 7.5E-05 1.6E-09 65.1 13.1 70 43-112 3-87 (199)
60 TIGR03729 acc_ester putative p 98.0 8.9E-06 1.9E-10 73.1 6.5 68 44-114 1-74 (239)
61 COG2908 Uncharacterized protei 98.0 3.5E-05 7.6E-10 68.7 9.9 198 46-277 1-229 (237)
62 KOG0376 Serine-threonine phosp 98.0 1.2E-06 2.5E-11 84.7 0.5 243 14-261 13-299 (476)
63 TIGR00619 sbcd exonuclease Sbc 98.0 1.7E-05 3.6E-10 72.3 6.8 73 43-115 1-89 (253)
64 COG1409 Icc Predicted phosphoh 98.0 0.00027 6E-09 64.2 14.8 73 43-117 1-81 (301)
65 cd07390 MPP_AQ1575 Aquifex aeo 97.9 2.5E-05 5.5E-10 66.5 7.1 67 45-116 1-84 (168)
66 PHA02546 47 endonuclease subun 97.8 3.7E-05 7.9E-10 73.0 6.6 73 43-115 1-90 (340)
67 cd08165 MPP_MPPE1 human MPPE1 97.8 0.00019 4.2E-09 60.5 9.6 49 67-115 36-90 (156)
68 cd07398 MPP_YbbF-LpxH Escheric 97.8 0.00012 2.5E-09 64.3 8.7 29 214-242 177-205 (217)
69 cd07401 MPP_TMEM62_N Homo sapi 97.7 0.00039 8.5E-09 63.3 11.9 71 45-115 2-90 (256)
70 PF06874 FBPase_2: Firmicute f 97.7 0.00055 1.2E-08 68.6 13.3 72 214-287 507-587 (640)
71 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.7 8.4E-05 1.8E-09 68.1 7.1 71 45-115 1-87 (262)
72 cd00839 MPP_PAPs purple acid p 97.7 0.00017 3.8E-09 66.4 8.7 70 43-116 5-83 (294)
73 cd00840 MPP_Mre11_N Mre11 nucl 97.7 7.6E-05 1.6E-09 65.5 5.7 73 44-116 1-91 (223)
74 PRK10966 exonuclease subunit S 97.6 0.00012 2.7E-09 71.1 6.7 72 43-115 1-88 (407)
75 cd07393 MPP_DR1119 Deinococcus 97.5 0.0002 4.3E-09 64.2 6.6 68 45-114 1-84 (232)
76 TIGR00024 SbcD_rel_arch putati 97.5 0.00025 5.4E-09 63.5 7.2 69 43-115 15-103 (225)
77 cd07391 MPP_PF1019 Pyrococcus 97.5 0.00031 6.6E-09 60.0 6.4 57 58-115 30-89 (172)
78 TIGR00583 mre11 DNA repair pro 97.4 0.00044 9.5E-09 67.1 7.1 55 42-96 3-69 (405)
79 cd07386 MPP_DNA_pol_II_small_a 97.2 0.00048 1E-08 62.1 5.5 68 46-115 2-95 (243)
80 COG1408 Predicted phosphohydro 97.2 0.00078 1.7E-08 62.4 6.1 71 43-115 45-119 (284)
81 cd07384 MPP_Cdc1_like Saccharo 96.9 0.002 4.2E-08 55.2 6.0 50 66-115 42-101 (171)
82 cd08166 MPP_Cdc1_like_1 unchar 96.8 0.0021 4.6E-08 56.3 5.6 48 67-114 40-93 (195)
83 cd00845 MPP_UshA_N_like Escher 96.7 0.003 6.4E-08 56.9 5.3 66 44-114 2-82 (252)
84 cd07380 MPP_CWF19_N Schizosacc 96.6 0.0056 1.2E-07 51.4 6.3 119 46-237 1-121 (150)
85 PF14582 Metallophos_3: Metall 96.6 0.0019 4.1E-08 57.5 3.2 208 42-274 5-247 (255)
86 COG0420 SbcD DNA repair exonuc 96.3 0.01 2.2E-07 57.3 6.8 74 43-116 1-90 (390)
87 COG1407 Predicted ICC-like pho 96.3 0.011 2.4E-07 53.0 6.5 73 41-116 18-112 (235)
88 PLN02533 probable purple acid 96.1 0.0066 1.4E-07 59.5 4.8 71 42-115 139-212 (427)
89 COG4186 Predicted phosphoester 96.1 0.016 3.5E-07 48.6 6.0 45 67-115 43-87 (186)
90 cd07410 MPP_CpdB_N Escherichia 96.0 0.0085 1.9E-07 55.0 4.7 65 44-113 2-94 (277)
91 PF08321 PPP5: PPP5 TPR repeat 96.0 0.011 2.4E-07 45.7 4.6 39 3-41 57-95 (95)
92 KOG3325 Membrane coat complex 95.9 0.094 2E-06 43.7 9.6 127 45-260 3-135 (183)
93 cd08164 MPP_Ted1 Saccharomyces 95.7 0.025 5.4E-07 49.4 5.8 64 50-113 24-110 (193)
94 cd08163 MPP_Cdc1 Saccharomyces 95.4 0.023 5.1E-07 51.8 5.0 24 213-236 203-226 (257)
95 cd07378 MPP_ACP5 Homo sapiens 95.3 0.035 7.6E-07 50.6 5.9 69 44-114 2-83 (277)
96 cd07387 MPP_PolD2_C PolD2 (DNA 95.3 0.87 1.9E-05 41.6 14.7 52 227-283 204-257 (257)
97 cd07408 MPP_SA0022_N Staphyloc 95.2 0.027 5.9E-07 51.2 4.8 65 44-113 2-81 (257)
98 COG1311 HYS2 Archaeal DNA poly 95.2 1.4 2.9E-05 43.6 16.4 53 227-285 419-472 (481)
99 cd07412 MPP_YhcR_N Bacillus su 94.2 0.084 1.8E-06 48.9 5.4 65 44-113 2-87 (288)
100 cd07411 MPP_SoxB_N Thermus the 93.3 0.13 2.8E-06 46.9 4.8 65 44-114 2-95 (264)
101 cd00842 MPP_ASMase acid sphing 93.1 0.17 3.8E-06 46.6 5.5 71 45-116 40-124 (296)
102 cd07409 MPP_CD73_N CD73 ecto-5 93.0 0.19 4.1E-06 46.3 5.6 66 44-114 2-94 (281)
103 KOG3662 Cell division control 92.7 0.23 5E-06 48.1 5.8 46 68-113 92-143 (410)
104 KOG2863 RNA lariat debranching 92.6 0.22 4.8E-06 47.3 5.2 73 43-115 1-89 (456)
105 PRK09419 bifunctional 2',3'-cy 91.9 0.2 4.4E-06 55.2 4.8 66 43-113 661-735 (1163)
106 COG1768 Predicted phosphohydro 91.7 0.33 7.1E-06 41.9 4.9 45 67-115 41-87 (230)
107 KOG0918 Selenium-binding prote 91.5 0.024 5.2E-07 54.2 -2.4 193 70-276 48-251 (476)
108 TIGR00282 metallophosphoestera 90.5 0.49 1.1E-05 43.5 5.2 67 43-114 1-71 (266)
109 cd07406 MPP_CG11883_N Drosophi 90.3 0.48 1E-05 43.0 5.0 56 53-113 21-82 (257)
110 cd07405 MPP_UshA_N Escherichia 88.5 0.51 1.1E-05 43.6 3.9 66 44-114 2-87 (285)
111 PF04042 DNA_pol_E_B: DNA poly 88.4 0.79 1.7E-05 40.0 4.8 72 45-116 1-93 (209)
112 KOG3339 Predicted glycosyltran 86.9 6.1 0.00013 34.3 9.1 85 71-161 40-140 (211)
113 cd07407 MPP_YHR202W_N Saccharo 86.6 0.69 1.5E-05 42.8 3.5 67 43-114 6-97 (282)
114 COG0737 UshA 5'-nucleotidase/2 85.5 0.95 2.1E-05 45.4 4.1 69 41-114 25-115 (517)
115 cd08162 MPP_PhoA_N Synechococc 85.4 1.1 2.4E-05 42.1 4.3 65 44-113 2-90 (313)
116 PRK09420 cpdB bifunctional 2', 84.0 1.1 2.4E-05 46.3 3.9 69 40-113 23-121 (649)
117 cd07382 MPP_DR1281 Deinococcus 83.3 2.3 5.1E-05 38.8 5.3 66 44-114 1-70 (255)
118 TIGR01390 CycNucDiestase 2',3' 82.8 1.3 2.7E-05 45.7 3.7 66 43-113 3-98 (626)
119 KOG2310 DNA repair exonuclease 81.6 3.3 7.2E-05 41.5 5.9 57 41-97 12-80 (646)
120 PRK09419 bifunctional 2',3'-cy 81.3 1.7 3.7E-05 48.0 4.3 67 42-113 41-138 (1163)
121 PTZ00235 DNA polymerase epsilo 80.5 4.8 0.0001 37.4 6.3 72 43-114 28-122 (291)
122 KOG2476 Uncharacterized conser 79.9 4.5 9.8E-05 39.8 6.1 70 41-111 4-75 (528)
123 PRK09558 ushA bifunctional UDP 78.1 2.2 4.8E-05 43.2 3.7 68 41-113 33-120 (551)
124 PRK11907 bifunctional 2',3'-cy 77.9 2.8 6.1E-05 44.4 4.4 67 42-113 115-212 (814)
125 PTZ00422 glideosome-associated 75.8 4 8.7E-05 39.6 4.5 71 42-114 26-109 (394)
126 KOG1378 Purple acid phosphatas 75.5 3.5 7.7E-05 40.5 4.0 33 217-250 323-355 (452)
127 KOG1432 Predicted DNA repair e 74.2 5.1 0.00011 38.1 4.6 48 67-115 98-148 (379)
128 KOG3947 Phosphoesterases [Gene 74.0 4 8.7E-05 37.6 3.7 65 43-115 62-127 (305)
129 TIGR01530 nadN NAD pyrophospha 73.6 5.6 0.00012 40.3 5.2 64 45-113 3-93 (550)
130 COG3855 Fbp Uncharacterized pr 72.4 2.4 5.2E-05 41.7 2.0 42 70-116 191-232 (648)
131 PRK09418 bifunctional 2',3'-cy 65.2 8.4 0.00018 40.8 4.5 68 41-113 38-141 (780)
132 KOG2679 Purple (tartrate-resis 55.6 7.4 0.00016 36.0 1.8 68 43-114 44-126 (336)
133 PF02875 Mur_ligase_C: Mur lig 55.4 32 0.00069 25.5 5.1 69 43-111 12-82 (91)
134 PF06874 FBPase_2: Firmicute f 44.8 18 0.00039 37.1 2.8 41 71-116 186-226 (640)
135 TIGR00282 metallophosphoestera 42.6 19 0.0004 33.1 2.3 39 72-114 2-41 (266)
136 PF12641 Flavodoxin_3: Flavodo 39.0 1.5E+02 0.0032 25.0 7.1 58 46-106 2-72 (160)
137 PF14164 YqzH: YqzH-like prote 38.7 73 0.0016 22.8 4.3 36 3-38 6-48 (64)
138 PF13258 DUF4049: Domain of un 36.3 1.6E+02 0.0036 26.7 7.1 87 71-165 86-186 (318)
139 smart00854 PGA_cap Bacterial c 34.7 58 0.0013 28.9 4.3 38 220-260 199-236 (239)
140 cd07382 MPP_DR1281 Deinococcus 34.4 34 0.00073 31.2 2.6 39 72-113 1-39 (255)
141 PRK10773 murF UDP-N-acetylmura 33.9 1.2E+02 0.0026 29.7 6.7 67 42-109 324-392 (453)
142 COG0634 Hpt Hypoxanthine-guani 32.4 3.3E+02 0.0072 23.5 9.5 75 15-93 11-116 (178)
143 COG3855 Fbp Uncharacterized pr 30.4 47 0.001 33.1 3.0 68 216-285 516-592 (648)
144 KOG3425 Uncharacterized conser 30.3 1.9E+02 0.0041 23.5 5.9 60 55-114 12-79 (128)
145 TIGR00550 nadA quinolinate syn 25.6 1.2E+02 0.0026 28.6 4.7 35 42-79 28-62 (310)
146 cd01533 4RHOD_Repeat_2 Member 24.1 3.2E+02 0.0068 20.6 6.6 87 13-109 9-100 (109)
147 KOG3770 Acid sphingomyelinase 23.3 1.7E+02 0.0037 29.9 5.6 61 57-117 196-266 (577)
148 TIGR03729 acc_ester putative p 22.8 85 0.0018 27.7 3.1 30 212-241 195-224 (239)
149 PF03494 Beta-APP: Beta-amyloi 22.8 68 0.0015 20.1 1.7 29 238-273 4-32 (39)
150 PF15007 CEP44: Centrosomal sp 22.2 55 0.0012 26.8 1.6 20 50-69 1-20 (131)
151 smart00411 BHL bacterial (prok 21.6 1.5E+02 0.0034 21.7 3.9 33 1-33 1-33 (90)
152 PF02885 Glycos_trans_3N: Glyc 21.4 1.4E+02 0.003 20.9 3.4 26 3-28 2-27 (66)
153 TIGR01143 murF UDP-N-acetylmur 21.3 3.6E+02 0.0079 25.9 7.4 69 42-111 295-365 (417)
154 COG1692 Calcineurin-like phosp 21.0 1.4E+02 0.003 27.3 4.0 12 227-238 169-180 (266)
155 PRK04531 acetylglutamate kinas 20.8 1.4E+02 0.0031 29.0 4.4 23 141-163 54-76 (398)
156 TIGR01201 HU_rel DNA-binding p 20.4 1.5E+02 0.0032 24.5 3.9 32 2-33 32-63 (145)
157 COG0148 Eno Enolase [Carbohydr 20.3 5.4E+02 0.012 25.2 8.0 93 15-113 168-288 (423)
No 1
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-89 Score=595.42 Aligned_cols=302 Identities=60% Similarity=1.160 Sum_probs=291.0
Q ss_pred CCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCCcceeecCCCCHHHHHHHHHhcCCCCCceEEEecCee
Q 022085 1 MDLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFV 80 (303)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~ep~ll~~~~~i~viGDIHG~~~~l~~ll~~~~~~~~~~~vfLGD~V 80 (303)
+++++.|+.+.+.+.++++++.+||.++++||.+||+++.++.|++|+||||||+.||..+|+..|.+++++|+||||||
T Consensus 1 ~dldr~ie~L~~~~li~E~eV~~LC~~~~eiL~~E~NV~~i~tPvtvcGDIHGQf~Dllelf~igG~~~~t~YLFLGDyV 80 (303)
T KOG0372|consen 1 SDLDRQIEQLRRCELIAESEVKALCAKVREILVEESNVQRIDTPVTVCGDIHGQFYDLLELFRIGGDVPETNYLFLGDYV 80 (303)
T ss_pred CcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhcCCCceecCCCcEEeecccchHHHHHHHHHhCCCCCCCceEeecchh
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcHHHHHHHHHhhhhCCCeEEEEcCCchhhhhhhccCChHHHHHHhCCchhhhhhhHHHhcccceeEEeceEEEEc
Q 022085 81 DRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVH 160 (303)
Q Consensus 81 DRG~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LP~~~~i~~~~l~vH 160 (303)
|||..|+|++.+|++||.+||+++.+||||||++.++..|||++||.+|||+..+|+.+.+.|++||++|+|++++||||
T Consensus 81 DRG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~~~vWr~c~eiFdyL~l~aiid~kifCVH 160 (303)
T KOG0372|consen 81 DRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSANVWRYCTEIFDYLSLAAIIDGKIFCVH 160 (303)
T ss_pred ccccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCChHHHHHHHHHHHhhhHhheecCcEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCHHHHHhhhccccCCCCCCccccccCCCCCCCCCccCCCCCceeeCcchhhhhhhhCCceEEEecccccccc
Q 022085 161 GGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEG 240 (303)
Q Consensus 161 gGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G 240 (303)
||+||++.+++||+.+.|..++|+++.++|+|||||.+.++|..||||.|++||.+++++|++.||+.+|+|+||.+.+|
T Consensus 161 GGlSP~i~~lDqIr~lDR~~Eiph~g~m~DllWSDPee~~g~~~SPRGaGylFG~dvv~~F~~~N~~~~I~RaHQLv~eG 240 (303)
T KOG0372|consen 161 GGLSPSIQTLDQIRVLDRKQEVPHDGAMCDLLWSDPEEGPGWGLSPRGAGYLFGEDVVESFLEANGLSLICRAHQLVMEG 240 (303)
T ss_pred CCCCcchhhHHHHHHhhccccCCCCCcchheeccCcccCCCcccCCCCccccccHHHHHHHHHhCChHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEeCCCeEEEEEcCCCCCccCCCcEEEEEEeCCCceEEEEeecCCcCCC-CCCCCCCCCCCC
Q 022085 241 LKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTETEENNQ-MRGPRTGVPYFL 303 (303)
Q Consensus 241 ~~~~~~~~~~itifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 303 (303)
|++.| +++++|||||||||++++|.||||.|+++....|..|++.|.... .+..+.+-+||+
T Consensus 241 yk~~F-~~~v~TVWSAPNYCYrCGN~AsIl~lde~~~~~F~vFeaa~~~~~~~~~kk~~~~yFl 303 (303)
T KOG0372|consen 241 YKWHF-DEKVVTVWSAPNYCYRCGNVAAILELDEDLDKDFRVFEAAPQESRGIPAKKPIADYFL 303 (303)
T ss_pred HHHhc-CCceEEEecCCchhhhcCChHHheeeccccCcceEeeecchhhhcCCcccCcchhhcC
Confidence 99999 999999999999999999999999999999999999999987633 222344557875
No 2
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=100.00 E-value=5e-82 Score=542.48 Aligned_cols=302 Identities=79% Similarity=1.382 Sum_probs=294.7
Q ss_pred CCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCCcceeecCCCCHHHHHHHHHhcCCCCCceEEEecCee
Q 022085 1 MDLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFV 80 (303)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~ep~ll~~~~~i~viGDIHG~~~~l~~ll~~~~~~~~~~~vfLGD~V 80 (303)
+++|++|+.+++++-++++|+..||+-++++|..|.++.+++.|+.|+||||||+.||.++|+..|..|+.+|||+||||
T Consensus 4 ~d~d~wi~~vk~ckyLpE~elk~LCe~v~d~L~eEsNvqPV~tPVTvCGDIHGQFyDL~eLFrtgG~vP~tnYiFmGDfV 83 (306)
T KOG0373|consen 4 MDLDQWIETVKKCKYLPENELKRLCEMVKDILMEESNVQPVSTPVTVCGDIHGQFYDLLELFRTGGQVPDTNYIFMGDFV 83 (306)
T ss_pred CCHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhhcCccccCCCeeEeeccchhHHHHHHHHHhcCCCCCcceEEecccc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcHHHHHHHHHhhhhCCCeEEEEcCCchhhhhhhccCChHHHHHHhCCchhhhhhhHHHhcccceeEEeceEEEEc
Q 022085 81 DRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVH 160 (303)
Q Consensus 81 DRG~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LP~~~~i~~~~l~vH 160 (303)
|||..|+|++.+|+.||.+||.++.+||||||.+.+...|||++||+.+||+...|+.+.++|+.|+++|+|+++++|||
T Consensus 84 DRGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGnan~wkycckVFD~LtlaAiID~~vLCVH 163 (306)
T KOG0373|consen 84 DRGYYSLETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNANVWKYCCKVFDFLTLAAIIDEKVLCVH 163 (306)
T ss_pred ccccccHHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCchHHHHHHHHHhhhhHHHHhcCcEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCHHHHHhhhccccCCCCCCccccccCCCCCCCCCccCCCCCceeeCcchhhhhhhhCCceEEEecccccccc
Q 022085 161 GGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEG 240 (303)
Q Consensus 161 gGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G 240 (303)
||+||++.+++||+-+.|..++|.++..+|++||||++.+.|..||||.|++||++++.+|...|++++|.|+||.+.+|
T Consensus 164 GGLSPdirtlDqir~i~R~qEiPh~G~fcDlmWSDPedve~W~vSpRGAGwlFGskVt~eF~~iN~L~LicRaHQLV~EG 243 (306)
T KOG0373|consen 164 GGLSPDIRTLDQIRLIERNQEIPHEGPFCDLMWSDPEDVETWAVSPRGAGWLFGSKVTTEFNHINNLNLICRAHQLVQEG 243 (306)
T ss_pred CCCCccceeHHHHHhHHhhccCCCCCCccceeccChhhhhhheeCCCCcceeechhhhHHHHhccchHHHHhHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEeCCCe-EEEEEcCCCCCccCCCcEEEEEEeCCCceEEEEeecCCcCCCCCCCCCCCCCCC
Q 022085 241 LKYMFQDKG-LVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTETEENNQMRGPRTGVPYFL 303 (303)
Q Consensus 241 ~~~~~~~~~-~itifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (303)
|++.| ++| ++|||||||||++++|.||||.++++.+.+++.|.+.|..+.+.-++...+||+
T Consensus 244 ~KymF-~eK~lvTVWSAPNYCYRCGNvAsi~~~d~~~~r~~k~F~avpd~~~~~p~r~~~pYFl 306 (306)
T KOG0373|consen 244 FKYMF-DEKGLVTVWSAPNYCYRCGNVASIMSFDDNLERETKIFSAVPDNSRVIPPRTRAPYFL 306 (306)
T ss_pred HHhcc-CCCCEEEEecCCchhhhccCeeeEEEecccCCccceeeeecCCccccCCCCCCCCCcC
Confidence 99999 655 999999999999999999999999999999999999999877666778888986
No 3
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=6.3e-78 Score=556.92 Aligned_cols=303 Identities=65% Similarity=1.184 Sum_probs=285.3
Q ss_pred CCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCCcceeecCCCCHHHHHHHHHhcCCCCCceEEEecCee
Q 022085 1 MDLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFV 80 (303)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~ep~ll~~~~~i~viGDIHG~~~~l~~ll~~~~~~~~~~~vfLGD~V 80 (303)
|+++++++++.++..++++++.+||++|+++|++||++++++.|++||||||||+.+|.++++..+.++.++++||||||
T Consensus 1 ~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyV 80 (303)
T PTZ00239 1 MDIDRHIATLLNGGCLPERDLKLICERAKEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKEGGDIPNANYIFIGDFV 80 (303)
T ss_pred CCHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEeeeEc
Confidence 67999999999999999999999999999999999999999999999999999999999999999998999999999999
Q ss_pred cCCCCcHHHHHHHHHhhhhCCCeEEEEcCCchhhhhhhccCChHHHHHHhCCchhhhhhhHHHhcccceeEEeceEEEEc
Q 022085 81 DRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVH 160 (303)
Q Consensus 81 DRG~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LP~~~~i~~~~l~vH 160 (303)
|||++|+|++.+++++|..+|.++++||||||.+.++..|||.+|+..+|+...+|..+.++|++||++++++++++|||
T Consensus 81 DRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~~~~~~~~~~f~~LPlaaii~~~i~cvH 160 (303)
T PTZ00239 81 DRGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNSNPWRLFMDVFDCLPLAALIEGQILCVH 160 (303)
T ss_pred CCCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcChhHHHHHHHHHHhCchheEEcCeEEEEc
Confidence 99999999999999999999999999999999999999999999999999877899999999999999999999999999
Q ss_pred CCCCCCCCCHHHHHhhhccccCCCCCCccccccCCCCCCCCCccCCCCCceeeCcchhhhhhhhCCceEEEecccccccc
Q 022085 161 GGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEG 240 (303)
Q Consensus 161 gGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G 240 (303)
||++|...++++++.++|+.+.|.+++++|+|||||.+.++|.+++||.|+.||++++++||++||+++||||||++++|
T Consensus 161 gGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G 240 (303)
T PTZ00239 161 GGLSPDMRTIDQIRTIDRKIEIPHEGPFCDLMWSDPEEVEYWAVNSRGAGYLFGAKVTKEFCRLNDLTLICRAHQLVMEG 240 (303)
T ss_pred CccCcccccHhhhccccCCCCCCCCCCceeeEecCccccCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhccc
Confidence 99999999999999999999999999999999999998889999999999999999999999999999999999999999
Q ss_pred eeEEeCCCeEEEEEcCCCCCccCCCcEEEEEEeCCCceEEEEeecCCcCCCCCCCCCCCCCCC
Q 022085 241 LKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTETEENNQMRGPRTGVPYFL 303 (303)
Q Consensus 241 ~~~~~~~~~~itifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (303)
|++.+.+++|+|||||||||+..+|+||||.++++.+++|++|+|.+.+......+..+.||+
T Consensus 241 ~~~~~~~~~~iTvfSa~~Y~~~~~N~~ail~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (303)
T PTZ00239 241 YKYWFPDQNLVTVWSAPNYCYRCGNIASILCLDENLQQTWKTFKEVPESAKSINPKNVLPYFL 303 (303)
T ss_pred eEEEeCCCeEEEEECCCcccCCCCceEEEEEECCCCcEeeEEeeCCCcccccCcccCCCCCCC
Confidence 998774556999999999999999999999999999999999999988743222222345664
No 4
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=4e-77 Score=548.41 Aligned_cols=285 Identities=67% Similarity=1.245 Sum_probs=277.2
Q ss_pred CHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCCcceeecCCCCHHHHHHHHHhcCCCCCceEEEecCeec
Q 022085 2 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVD 81 (303)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~ep~ll~~~~~i~viGDIHG~~~~l~~ll~~~~~~~~~~~vfLGD~VD 81 (303)
+++++++++.++..++++++.+||++|++++++||++++++.|++||||||||+.+|.++|+..+.++.++|||||||||
T Consensus 1 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~lfLGDyVD 80 (285)
T cd07415 1 DLDKWIEQLKKCELLPESEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELFRVGGDPPDTNYLFLGDYVD 80 (285)
T ss_pred CHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCEEecCCCEEEEEeCCCCHHHHHHHHHHcCCCCCCeEEEEeEECC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHhhhhCCCeEEEEcCCchhhhhhhccCChHHHHHHhCCchhhhhhhHHHhcccceeEEeceEEEEcC
Q 022085 82 RGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHG 161 (303)
Q Consensus 82 RG~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LP~~~~i~~~~l~vHg 161 (303)
||++|+|++.+++++|..+|.++++||||||.+.++..|||..|+..+|+...+|..+.++|++||++|+++++++||||
T Consensus 81 RG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~~~l~~~~~~~f~~lPlaaii~~~i~cvHg 160 (285)
T cd07415 81 RGYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGNANVWKYCTDLFDYLPLAALIDNQIFCVHG 160 (285)
T ss_pred CCcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCchHHHHHHHHHHHHhHHHhEeCCeEEEEcC
Confidence 99999999999999999999999999999999999999999999999998778999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHhhhccccCCCCCCccccccCCCCCCCCCccCCCCCceeeCcchhhhhhhhCCceEEEecccccccce
Q 022085 162 GLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGL 241 (303)
Q Consensus 162 Gi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~ 241 (303)
|++|...++++++.++|+.+.+.++++.|++||||.+..+|.+++||.|+.||++++++||++||+++||||||++++||
T Consensus 161 Gi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~ 240 (285)
T cd07415 161 GLSPSIDTLDQIRAIDRFQEVPHEGPMCDLLWSDPDDIEGWGISPRGAGYLFGQDVVEEFNHNNGLTLICRAHQLVMEGY 240 (285)
T ss_pred CCCCCcccHHHhhcccCCCCCCCCCCccceEecCCCccCCCCcCCCCCccccCHHHHHHHHHHCCCeEEEEcCccccceE
Confidence 99999999999999999999999999999999999988899999999999999999999999999999999999999999
Q ss_pred eEEeCCCeEEEEEcCCCCCccCCCcEEEEEEeCCCceEEEEeecCC
Q 022085 242 KYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTETE 287 (303)
Q Consensus 242 ~~~~~~~~~itifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~~ 287 (303)
++.+ +++|+|||||||||+..+|+||||.|++++++++++|+|.|
T Consensus 241 ~~~~-~~~~~TvfSa~~y~~~~~n~~a~l~i~~~~~~~~~~~~~~~ 285 (285)
T cd07415 241 QWMF-DDKLVTVWSAPNYCYRCGNVASIMELDEHLKRSFKVFEAAP 285 (285)
T ss_pred EEec-CCcEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeccCC
Confidence 9988 99999999999999999999999999999999999999875
No 5
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=4e-76 Score=547.51 Aligned_cols=281 Identities=33% Similarity=0.580 Sum_probs=260.0
Q ss_pred CHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCC----CcceeecCCCCHHHHHHHHHhcCCCC-CceEEEe
Q 022085 2 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNS----PVTVCGDIHGQFHDLMKLFQTGGHVP-ETNYIFM 76 (303)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~ep~ll~~~~----~i~viGDIHG~~~~l~~ll~~~~~~~-~~~~vfL 76 (303)
+++.+|+++++++.++++++.+||++|+++|++||++++++. |++||||||||+.+|.++|+..|.++ .++||||
T Consensus 6 ~~~~~i~~~~~~~~l~~~~i~~L~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~~~g~~~~~~~~lFL 85 (321)
T cd07420 6 HIDALIEAFKEKQLLHAKYVLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKNGLPSPENPYVFN 85 (321)
T ss_pred HHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHHHcCCCCccceEEEe
Confidence 478999999999999999999999999999999999999975 89999999999999999999999875 4789999
Q ss_pred cCeecCCCCcHHHHHHHHHhhhhCCCeEEEEcCCchhhhhhhccCChHHHHHHhCC--chhhhhhhHHHhcccceeEEec
Q 022085 77 GDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGN--ANAWRYCTDVFDYLTLSAIIDG 154 (303)
Q Consensus 77 GD~VDRG~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~--~~~~~~~~~~f~~LP~~~~i~~ 154 (303)
|||||||++|+||+.+|++||+.||+++++||||||.+.++..|||.+||..+|+. ..+|..+.++|++||+||++++
T Consensus 86 GDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~~~~l~~~~~~~F~~LPlaaii~~ 165 (321)
T cd07420 86 GDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLHGKKILRLLEDVFSWLPLATIIDN 165 (321)
T ss_pred ccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCccHHHHHHHHHHHHHhCCceEEEcC
Confidence 99999999999999999999999999999999999999999999999999999984 6799999999999999999999
Q ss_pred eEEEEcCCCCCCCCCHHHHHhhhcccc-----CCC----------------------CCCccccccCCCCCCCC-CccCC
Q 022085 155 TVLCVHGGLSPDIRTIDQIRVIERNCE-----IPH----------------------EGPFCDLMWSDPEDIET-WAVSP 206 (303)
Q Consensus 155 ~~l~vHgGi~p~~~~~~~i~~i~r~~~-----~~~----------------------~~~~~dllWsdp~~~~~-~~~~~ 206 (303)
++|||||||+| ..++++++.++|+.. .|. .+++.|+|||||++..+ |.+++
T Consensus 166 ~i~cvHGGi~~-~~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlLWSDP~~~~~~~~~~~ 244 (321)
T cd07420 166 KILVVHGGISD-STDLDLLDKIDRHKYVSVLRPPLRKGMEELTGEEEDPSEPLDKTEWRQILDILWSDPKAQKGCKPNTF 244 (321)
T ss_pred CEEEEeCCCCC-ccCHHHHHhhhccccccccCCCccccccccccccccccccccccccchhheeeecCCccCCCCCccCC
Confidence 99999999997 468999999988521 111 03578999999997555 67789
Q ss_pred CCCceeeCcchhhhhhhhCCceEEEecccccccceeEEeCCCeEEEEEcCCCCCccCCCcEEEEEEeCCCceEEEEee
Q 022085 207 RGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFT 284 (303)
Q Consensus 207 rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~~itifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~ 284 (303)
||.|+.||++++++||++|++++||||||++++||++.+ +++|+|||||||||+..+|+||||.|+++++++|.+|.
T Consensus 245 RG~g~~FG~~~~~~Fl~~n~l~~IIR~He~v~~G~~~~~-~~~~iTvFSa~nY~~~~~N~gavl~i~~~~~~~f~~~~ 321 (321)
T cd07420 245 RGGGCYFGPDVTSKVLQKHGLSLLIRSHECKPEGYEFCH-NNKVITIFSASNYYEEGSNRGAYIKLGPDLTPHFVQYQ 321 (321)
T ss_pred CCCccccCHHHHHHHHHHCCCcEEEEcChhhhcceEEec-CCeEEEEecCCccCCCCCccEEEEEECCCCceeEEEeC
Confidence 999999999999999999999999999999999999988 99999999999999999999999999999999999884
No 6
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=1.9e-75 Score=542.23 Aligned_cols=286 Identities=41% Similarity=0.888 Sum_probs=275.0
Q ss_pred CHHHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHhhCCCccccCCCcceeecCCCCHHHHHHHHHhcCCCCCceE
Q 022085 2 DLDQWIAKVKEGQ--------HLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNY 73 (303)
Q Consensus 2 ~~~~~~~~~~~~~--------~~~~~~~~~l~~~~~~i~~~ep~ll~~~~~i~viGDIHG~~~~l~~ll~~~~~~~~~~~ 73 (303)
+++++|+++++.. .++++++.+||++|+++|++||++++++.+++||||||||+.+|.++|+..++++.++|
T Consensus 10 ~~~~~i~~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~ep~ll~i~~~i~vvGDIHG~~~dL~~l~~~~g~~~~~~y 89 (320)
T PTZ00480 10 DVDNIIERLLSVRGSKPGKNVNLTEAEVRGLCIKARDIFISQPILLELEAPLKICGDVHGQYFDLLRLFEYGGYPPESNY 89 (320)
T ss_pred CHHHHHHHHHhccccCccccCCCCHHHHHHHHHHHHHHHHhCCceEecCCCeEEEeecccCHHHHHHHHHhcCCCCcceE
Confidence 5889999998654 58999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCeecCCCCcHHHHHHHHHhhhhCCCeEEEEcCCchhhhhhhccCChHHHHHHhCCchhhhhhhHHHhcccceeEEe
Q 022085 74 IFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIID 153 (303)
Q Consensus 74 vfLGD~VDRG~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LP~~~~i~ 153 (303)
||||||||||++|+|++.+++++|..+|.++++||||||.+.++..|||..|+..+|+ ..+|..+.++|++||++|+++
T Consensus 90 lfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y~-~~l~~~~~~~F~~LPlaAiI~ 168 (320)
T PTZ00480 90 LFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYT-IKLWKTFTDCFNCLPVAALID 168 (320)
T ss_pred EEeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhcC-HHHHHHHHHHHHhccHhheec
Confidence 9999999999999999999999999999999999999999999999999999999995 679999999999999999999
Q ss_pred ceEEEEcCCCCCCCCCHHHHHhhhccccCCCCCCccccccCCCCC-CCCCccCCCCCceeeCcchhhhhhhhCCceEEEe
Q 022085 154 GTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPED-IETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCR 232 (303)
Q Consensus 154 ~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~-~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIr 232 (303)
+++|||||||+|.+.++++++.+.||.+.+.+++++|+|||||.. ..+|.+++||.|++||++++++||++|++++|||
T Consensus 169 ~~i~cvHGGI~p~~~~l~~i~~i~rp~~~~~~~~~~dllWSDP~~~~~~~~~s~RG~g~~FG~~~~~~Fl~~n~l~~IiR 248 (320)
T PTZ00480 169 EKILCMHGGLSPELSNLEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWADNERGVSYVFSQEIVQVFLKKHELDLICR 248 (320)
T ss_pred CcEEEEcCCcCcccCCHHHHhcccCCCCCCccchhhheeecCcccccCCCccCCCCCccccCHHHHHHHHHhCCCcEEEE
Confidence 999999999999999999999999999999999999999999985 6799999999999999999999999999999999
Q ss_pred cccccccceeEEeCCCeEEEEEcCCCCCccCCCcEEEEEEeCCCceEEEEeecCCcC
Q 022085 233 AHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTETEEN 289 (303)
Q Consensus 233 gH~~~~~G~~~~~~~~~~itifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~~~~ 289 (303)
|||++++||++.+ +++|+|||||||||+..+|+||+|.|++++.++|++|+|.+..
T Consensus 249 ~Hq~v~~G~~~~~-~~~~iTvFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~ 304 (320)
T PTZ00480 249 AHQVVEDGYEFFS-KRQLVTLFSAPNYCGEFDNAGSMMTIDESLMCSFQILKPAEQG 304 (320)
T ss_pred cCccccCceEEeC-CCcEEEEeCCcccCCCCCccEEEEEECCCCcEeEEEecCCccc
Confidence 9999999999987 9999999999999999999999999999999999999988766
No 7
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=4.9e-74 Score=532.85 Aligned_cols=286 Identities=40% Similarity=0.722 Sum_probs=271.1
Q ss_pred CHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCCcceeecCCCCHHHHHHHHHhcCCCCCceEEEecCeec
Q 022085 2 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVD 81 (303)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~ep~ll~~~~~i~viGDIHG~~~~l~~ll~~~~~~~~~~~vfLGD~VD 81 (303)
.++-|++++.+++.++++++.+||++|+++|++||++++++.|++||||||||+.+|.++|+..+.++.++|||||||||
T Consensus 2 ~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~e~~l~~i~~~i~ViGDIHG~~~dL~~l~~~~g~~~~~~ylFLGDyVD 81 (305)
T cd07416 2 RIDVLKAHFMREGRLSEEDALRIITEGAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSPANTRYLFLGDYVD 81 (305)
T ss_pred CHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCeEccCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEECCccC
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHhhhhCCCeEEEEcCCchhhhhhhccCChHHHHHHhCCchhhhhhhHHHhcccceeEEeceEEEEcC
Q 022085 82 RGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHG 161 (303)
Q Consensus 82 RG~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LP~~~~i~~~~l~vHg 161 (303)
||++|+||+.+++++|..+|.++++||||||.+.++..|||..|+..+|+ ..+|..+.++|++||++++++++++||||
T Consensus 82 RG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y~-~~l~~~~~~~f~~LPlaaii~~~i~~vHG 160 (305)
T cd07416 82 RGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS-ERVYDACMEAFDCLPLAALMNQQFLCVHG 160 (305)
T ss_pred CCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhcc-HHHHHHHHHHHhhccceeEEcCCEEEEcC
Confidence 99999999999999999999999999999999999999999999999994 67899999999999999999999999999
Q ss_pred CCCCCCCCHHHHHhhhccccCCCCCCccccccCCCCCCC-------CCccC-CCCCceeeCcchhhhhhhhCCceEEEec
Q 022085 162 GLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIE-------TWAVS-PRGAGWLFGSRVTSEFNHINNLDLVCRA 233 (303)
Q Consensus 162 Gi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~-------~~~~~-~rg~g~~fg~~~~~~fl~~~~~~~iIrg 233 (303)
|++|.+.+++++++++|+.+.|.+++++|+|||||.+.. +|.++ +||.|+.||++++++||++||+++||||
T Consensus 161 Gi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~~~Rg~g~~fG~~~~~~Fl~~n~l~~iiR~ 240 (305)
T cd07416 161 GLSPELKTLDDIRKLDRFREPPAFGPMCDLLWSDPLEDFGNEKTQEHFVHNTVRGCSYFYSYRAVCEFLQKNNLLSIIRA 240 (305)
T ss_pred CCCcccccHHHhcccCCCCCCCCCCcceeeeecCcccccccccccccccccCCCCCceecCHHHHHHHHHHcCCeEEEEe
Confidence 999999999999999999999999999999999997422 47654 8999999999999999999999999999
Q ss_pred ccccccceeEEeCCC------eEEEEEcCCCCCccCCCcEEEEEEeCCCceEEEEeecCCcCC
Q 022085 234 HQLVQEGLKYMFQDK------GLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTETEENN 290 (303)
Q Consensus 234 H~~~~~G~~~~~~~~------~~itifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~~~~~ 290 (303)
||++++||++.+ ++ +|+|||||||||+..+|+||+|.|+++ .++|++|+|.||+-
T Consensus 241 He~~~~G~~~~~-~~~~~~~~~~iTvFSa~~Y~~~~~N~~a~l~i~~~-~~~~~~~~~~~~~~ 301 (305)
T cd07416 241 HEAQDAGYRMYR-KSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENN-VMNIRQFNCSPHPY 301 (305)
T ss_pred ccccccceEEec-CCCcCCCCcEEEEeCCccccCCCCceEEEEEEcCC-cceEEEecCCCCCC
Confidence 999999999977 65 999999999999999999999999987 57999999999984
No 8
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=2.7e-74 Score=535.90 Aligned_cols=286 Identities=38% Similarity=0.671 Sum_probs=272.0
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCC----cceeecCCCCHHHHHHHHHhcCCCCC-ceEEEec
Q 022085 3 LDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSP----VTVCGDIHGQFHDLMKLFQTGGHVPE-TNYIFMG 77 (303)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~ep~ll~~~~~----i~viGDIHG~~~~l~~ll~~~~~~~~-~~~vfLG 77 (303)
+++++++++++..++++++.+||++|++++++||++++++.| ++||||||||+.+|.++|+..++++. ++|||||
T Consensus 16 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDIHG~~~dL~~ll~~~g~~~~~~~ylFLG 95 (316)
T cd07417 16 VKEMIEWFKDQKKLHKKYAYQILLQVKELLKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFELNGLPSETNPYLFNG 95 (316)
T ss_pred HHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCcceeccCCCCceeEEeecccCCHHHHHHHHHhcCCCCccCeEEEEe
Confidence 789999999999999999999999999999999999999765 99999999999999999999998754 6799999
Q ss_pred CeecCCCCcHHHHHHHHHhhhhCCCeEEEEcCCchhhhhhhccCChHHHHHHhCCchhhhhhhHHHhcccceeEEeceEE
Q 022085 78 DFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVL 157 (303)
Q Consensus 78 D~VDRG~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LP~~~~i~~~~l 157 (303)
||||||++|+||+.+++++|..+|+++++||||||.+.++..|||..|+..+|+ ..+|..+.++|++||++++++++++
T Consensus 96 DyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~~-~~l~~~~~~~f~~LPlaaii~~~~~ 174 (316)
T cd07417 96 DFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKYN-EQMFDLFSEVFNWLPLAHLINGKVL 174 (316)
T ss_pred eEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhccc-HHHHHHHHHHHHhchHhheeCCeEE
Confidence 999999999999999999999999999999999999999999999999999995 6789999999999999999999999
Q ss_pred EEcCCC-CCCCCCHHHHHhhhccccCCCCCCccccccCCCCCCCCCccCCCCCceeeCcchhhhhhhhCCceEEEecccc
Q 022085 158 CVHGGL-SPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQL 236 (303)
Q Consensus 158 ~vHgGi-~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~ 236 (303)
|||||+ +|...+++++++++|+.+.+.+++++|+|||||.+..+|.+++||.|+.||++++++||++||+++||||||+
T Consensus 175 ~vHgGi~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~s~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~ 254 (316)
T cd07417 175 VVHGGLFSDDGVTLDDIRKIDRFRQPPDSGLMCELLWSDPQPQPGRSPSKRGVGCQFGPDVTKRFLEENNLEYIIRSHEV 254 (316)
T ss_pred EEccccccCCCccHHHhhcccCCCCCCccccceeeeecCCCCCCCCCccCCCCceEeCHHHHHHHHHHcCCcEEEECCcc
Confidence 999999 5667899999999999988889999999999999888999999999999999999999999999999999999
Q ss_pred cccceeEEeCCCeEEEEEcCCCCCccCCCcEEEEEEeC-CCceEEEEeecCCcCC
Q 022085 237 VQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNE-NMEREVKFFTETEENN 290 (303)
Q Consensus 237 ~~~G~~~~~~~~~~itifSa~~y~~~~~N~~avl~i~~-~~~~~~~~~~~~~~~~ 290 (303)
+++||++.+ +++|+|||||||||+..+|+||+|.|++ +++++|++|+|.|++.
T Consensus 255 ~~~G~~~~~-~~~~~TvfSa~~Y~~~~~N~ga~~~i~~~~~~~~~~~~~~~~~~~ 308 (316)
T cd07417 255 KDEGYEVEH-DGKCITVFSAPNYCDQMGNKGAFIRITGSDLKPKFTQFEAVPHPN 308 (316)
T ss_pred cceeEEEec-CCeEEEEeCCccccCCCCcceEEEEEeCCCceeeeEeccCCCCCC
Confidence 999999988 9999999999999999999999999999 8899999999998773
No 9
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=4e-74 Score=530.38 Aligned_cols=283 Identities=43% Similarity=0.910 Sum_probs=271.0
Q ss_pred CHHHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHhhCCCccccCCCcceeecCCCCHHHHHHHHHhcCCCCCceE
Q 022085 2 DLDQWIAKVKEGQ--------HLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNY 73 (303)
Q Consensus 2 ~~~~~~~~~~~~~--------~~~~~~~~~l~~~~~~i~~~ep~ll~~~~~i~viGDIHG~~~~l~~ll~~~~~~~~~~~ 73 (303)
+++++|+++.+.. .++++++.+||++++++|++||++++++.+++||||||||+.+|.++|+..+.++.++|
T Consensus 1 ~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~l~~~~~~~~~~~~ 80 (293)
T cd07414 1 DIDSIIERLLEVRGSRPGKNVQLTEAEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNY 80 (293)
T ss_pred CHHHHHHHHHhccccCCcccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCceEEEEecCCCHHHHHHHHHhcCCCCcceE
Confidence 4788899998655 68999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCeecCCCCcHHHHHHHHHhhhhCCCeEEEEcCCchhhhhhhccCChHHHHHHhCCchhhhhhhHHHhcccceeEEe
Q 022085 74 IFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIID 153 (303)
Q Consensus 74 vfLGD~VDRG~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LP~~~~i~ 153 (303)
||||||||||++|+|++.+++++|..+|.++++||||||.+.++..|||..|+..+|+ ..+|..+.++|++||++++++
T Consensus 81 lfLGDyVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~-~~l~~~~~~~f~~lPlaa~i~ 159 (293)
T cd07414 81 LFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN-IKLWKTFTDCFNCLPVAAIID 159 (293)
T ss_pred EEEeeEecCCCCcHHHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhhh-HHHHHHHHHHHHHhHHHHhhC
Confidence 9999999999999999999999999999999999999999999999999999999995 679999999999999999999
Q ss_pred ceEEEEcCCCCCCCCCHHHHHhhhccccCCCCCCccccccCCCCC-CCCCccCCCCCceeeCcchhhhhhhhCCceEEEe
Q 022085 154 GTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPED-IETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCR 232 (303)
Q Consensus 154 ~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~-~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIr 232 (303)
++++|||||++|...++++++.++|+.+.+.+++++|++||||.. ..+|.+++||.|+.||++++++||++||+++|||
T Consensus 160 ~~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR 239 (293)
T cd07414 160 EKIFCMHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGKDVVAKFLNKHDLDLICR 239 (293)
T ss_pred CcEEEEccCCCcccCcHHHHhcccCCCCCCchhhHhhhhccCcccccCCCccCCCCcceecCHHHHHHHHHHcCCeEEEE
Confidence 999999999999999999999999999999999999999999984 6899999999999999999999999999999999
Q ss_pred cccccccceeEEeCCCeEEEEEcCCCCCccCCCcEEEEEEeCCCceEEEEeecC
Q 022085 233 AHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTET 286 (303)
Q Consensus 233 gH~~~~~G~~~~~~~~~~itifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~ 286 (303)
|||++++||++.+ +++|+||||||+||+..+|+||||.|++++.++|++|+|.
T Consensus 240 ~He~~~~G~~~~~-~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~~~~~~~~ 292 (293)
T cd07414 240 AHQVVEDGYEFFA-KRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 292 (293)
T ss_pred CCccccCeEEEeC-CCcEEEEecCCcccCCCCceEEEEEECCCCcEEEEEecCC
Confidence 9999999999977 9999999999999999999999999999999999999864
No 10
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=1.1e-73 Score=527.00 Aligned_cols=281 Identities=36% Similarity=0.799 Sum_probs=268.1
Q ss_pred HHHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHhhCCCccccCCCcceeecCCCCHHHHHHHHHhcCCCCCceEE
Q 022085 3 LDQWIAKVKEGQ--------HLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYI 74 (303)
Q Consensus 3 ~~~~~~~~~~~~--------~~~~~~~~~l~~~~~~i~~~ep~ll~~~~~i~viGDIHG~~~~l~~ll~~~~~~~~~~~v 74 (303)
++++|+++++.. .++++++.+||++++++|++||++++++.|++||||||||+.+|.++|+..+.++.++++
T Consensus 4 ~~~~i~~~~~~~~~~~~~~~~i~~~~i~~l~~~~~~il~~e~~ll~i~~p~~ViGDIHG~~~~L~~l~~~~~~~~~~~~l 83 (294)
T PTZ00244 4 VQTLIEKMLTVKGNRTQRQILIREEDIRAVLTEVREIFMSQPMLLEIRPPVRVCGDTHGQYYDLLRIFEKCGFPPYSNYL 83 (294)
T ss_pred HHHHHHHHHhcccCCCccccCCCHHHHHHHHHHHHHHHHhCCCeEeccCCceeeccCCCCHHHHHHHHHHcCCCCcccEE
Confidence 577788887643 689999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCeecCCCCcHHHHHHHHHhhhhCCCeEEEEcCCchhhhhhhccCChHHHHHHhCCchhhhhhhHHHhcccceeEEec
Q 022085 75 FMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDG 154 (303)
Q Consensus 75 fLGD~VDRG~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LP~~~~i~~ 154 (303)
|||||||||++|+|++.+++++|..+|.++++||||||.+.++..|||..++..+|+ ..+|..+.++|++||+++++++
T Consensus 84 fLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~-~~l~~~~~~~f~~lPlaaii~~ 162 (294)
T PTZ00244 84 FLGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYN-IKLFKAFTDVFNTMPVCCVISE 162 (294)
T ss_pred EeeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHhh-HHHHHHHHHHHHhCchheEecC
Confidence 999999999999999999999999999999999999999999999999999999995 6789999999999999999999
Q ss_pred eEEEEcCCCCCCCCCHHHHHhhhccccCCCCCCccccccCCCCC-CCCCccCCCCCceeeCcchhhhhhhhCCceEEEec
Q 022085 155 TVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPED-IETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRA 233 (303)
Q Consensus 155 ~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~-~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrg 233 (303)
+++|||||++|.+.++++++.++||.+.+.+++++|++||||.+ ..+|.+++||.|++||++++++||++||+++||||
T Consensus 163 ~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~ 242 (294)
T PTZ00244 163 KIICMHGGLSPDLTSLASVNEIERPCDVPDRGILCDLLWADPEDEVRGFLESDRGVSYLFGEDIVNDFLDMVDMDLIVRA 242 (294)
T ss_pred eeEEEcCCCCchhhHHHHhhhhccccCCCccchhheeeecCcccccCCCCcCCCCCccccCHHHHHHHHHHcCCcEEEEc
Confidence 99999999999999999999999999999999999999999985 67999999999999999999999999999999999
Q ss_pred ccccccceeEEeCCCeEEEEEcCCCCCccCCCcEEEEEEeCCCceEEEEeec
Q 022085 234 HQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTE 285 (303)
Q Consensus 234 H~~~~~G~~~~~~~~~~itifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~ 285 (303)
||++++||++.+ +++|+|||||||||+..+|+||||.|+++.+++|++|.+
T Consensus 243 Hq~~~~G~~~~~-~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~f~~~~~ 293 (294)
T PTZ00244 243 HQVMERGYGFFA-SRQLVTVFSAPNYCGEFDNDAAVMNIDDKLQCSFLIIPA 293 (294)
T ss_pred CccccCceEEcC-CCeEEEEeCCccccCCCCceEEEEEECCCCcEeEEEeec
Confidence 999999999977 999999999999999999999999999999999998865
No 11
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=5.1e-74 Score=534.46 Aligned_cols=283 Identities=42% Similarity=0.885 Sum_probs=270.3
Q ss_pred HHHHHHHHhcC----------CCCCHHHHHHHHHHHHHHHhhCCCccccCCCcceeecCCCCHHHHHHHHHhcC-CCCCc
Q 022085 3 LDQWIAKVKEG----------QHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGG-HVPET 71 (303)
Q Consensus 3 ~~~~~~~~~~~----------~~~~~~~~~~l~~~~~~i~~~ep~ll~~~~~i~viGDIHG~~~~l~~ll~~~~-~~~~~ 71 (303)
+++++..+++. ..++++++.+||..+.+++.++|+++++++||.|+||||||+.||.++++..| +|++.
T Consensus 9 ~~~~i~~~~~~~~~~~~~~~~~~l~~~ei~~l~~~~~~if~~~~~l~e~~aPV~i~GDiHGq~~DLlrlf~~~g~~pp~~ 88 (331)
T KOG0374|consen 9 LDELIRKLLSVGNKKTEKKRQVPLSKSEIIKLCDKAREIFLSQPTLLELSAPVKIVGDIHGQFGDLLRLFDLLGSFPPDQ 88 (331)
T ss_pred HHHHHHHHhhccccCCCcccceeccHHHHHHHHHHHHHHhcCCCceeecCCCEEEEccCcCCHHHHHHHHHhcCCCCCcc
Confidence 45666666432 14899999999999999999999999999999999999999999999999999 99999
Q ss_pred eEEEecCeecCCCCcHHHHHHHHHhhhhCCCeEEEEcCCchhhhhhhccCChHHHHHHhCCchhhhhhhHHHhcccceeE
Q 022085 72 NYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAI 151 (303)
Q Consensus 72 ~~vfLGD~VDRG~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LP~~~~ 151 (303)
+|||||||||||++|+|++.+|+++|++||+++++||||||.+.++..|||++||.++|+...+|..+++.|.+||++|+
T Consensus 89 ~ylFLGDYVDRG~~slE~i~LL~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~~~~w~~F~~~f~~mp~~a~ 168 (331)
T KOG0374|consen 89 NYVFLGDYVDRGKQSLETICLLFALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGEIKLWKAFNDAFNCLPLAAL 168 (331)
T ss_pred cEEEecccccCCccceEEeehhhhhhhhCCceEEEeccccccccccceeeeHHHHHHhcchHHHHHHHHHHHhhCchhhe
Confidence 99999999999999999999999999999999999999999999999999999999999767899999999999999999
Q ss_pred EeceEEEEcCCCCCCCCCHHHHHhhhccccCCCCCCccccccCCCCC-CCCCccCCCCCceeeCcchhhhhhhhCCceEE
Q 022085 152 IDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPED-IETWAVSPRGAGWLFGSRVTSEFNHINNLDLV 230 (303)
Q Consensus 152 i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~-~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~i 230 (303)
|+++++|+|||++|.+.++++++.|.||.+.++.++++||+||||.. ..+|.++.||.++.||++++++||+++++++|
T Consensus 169 i~~kI~CmhGGlsp~l~~~~~i~~i~rp~~~~~~gll~DLlWsdp~~~~~g~~~n~Rg~s~~fg~~~v~~f~~~~~ldli 248 (331)
T KOG0374|consen 169 IDGKILCMHGGLSPHLKSLDQIRAIPRPTDSPDKGLLCDLLWSDPDDDVPGWEENDRGVSFTFGPAVVEDFCKKLDLDLI 248 (331)
T ss_pred ecceEEEecCCCChhhcChHHHhhccCCcCCCccceeeeeeecCCCCCCCCcccCCCceeeEecHHHHHHHHHHhCcceE
Confidence 99999999999999999999999999999999999999999999996 69999999999999999999999999999999
Q ss_pred EecccccccceeEEeCCCeEEEEEcCCCCCccCCCcEEEEEEeCCCceEEEEeecC
Q 022085 231 CRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTET 286 (303)
Q Consensus 231 IrgH~~~~~G~~~~~~~~~~itifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~ 286 (303)
|||||++++||++.. +++++||||||+||+.+.|.||+|.+++++.++|.++.|.
T Consensus 249 vRaHqvv~dGyeffa-~r~lvTIFSAP~Ycg~~~n~gavm~Vd~~l~~sf~~l~p~ 303 (331)
T KOG0374|consen 249 VRAHQVVEDGYEFFA-GRKLVTIFSAPNYCGEFDNAGAVMRVDKNLKCSFVILRPE 303 (331)
T ss_pred EEcCccccccceEec-CceEEEEecCchhccccCCceEEEEECCCCeEEEEEeccc
Confidence 999999999999954 9999999999999999999999999999999999999995
No 12
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=5.5e-72 Score=511.99 Aligned_cols=269 Identities=48% Similarity=0.912 Sum_probs=259.6
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCccccCCCcceeecCCCCHHHHHHHHHhcCCCCCceEEEecCeecCCCCcHHHHHHHHH
Q 022085 16 LLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLL 95 (303)
Q Consensus 16 ~~~~~~~~l~~~~~~i~~~ep~ll~~~~~i~viGDIHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDRG~~s~evl~~l~~ 95 (303)
++++++.+||++|+++|++||+++++++|++||||||||+.+|.++|+..+.++.+++||||||||||++|+|++.++++
T Consensus 1 ~~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~e~l~~l~~ 80 (271)
T smart00156 1 LYAEEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSIEVILLLFA 80 (271)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCeEEeCCCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhCCCeEEEEcCCchhhhhhhccCChHHHHHHhCCchhhhhhhHHHhcccceeEEeceEEEEcCCCCCCCCCHHHHHh
Q 022085 96 LKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRV 175 (303)
Q Consensus 96 lk~~~P~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LP~~~~i~~~~l~vHgGi~p~~~~~~~i~~ 175 (303)
+|..+|.++++||||||.+.++..|||.+|+..+|+ ..+|..+.++|++||++++++++++|||||++|...++++++.
T Consensus 81 lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~-~~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~~~~l~~i~~ 159 (271)
T smart00156 81 LKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYG-EEIYEKFQEAFSWLPLAALIDNKILCMHGGLSPDLTTLDDIRK 159 (271)
T ss_pred HHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcC-HHHHHHHHHHHhhChhheEEcCeEEEEecCCCCccCCHHHHhc
Confidence 999999999999999999999999999999999996 6899999999999999999999999999999999999999999
Q ss_pred hhccccCCCCCCccccccCCCC-CCCCCccCCCCCceeeCcchhhhhhhhCCceEEEecccccccceeEEeCCCeEEEEE
Q 022085 176 IERNCEIPHEGPFCDLMWSDPE-DIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVW 254 (303)
Q Consensus 176 i~r~~~~~~~~~~~dllWsdp~-~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~~itif 254 (303)
++|+.+.+.++.+.|++||||. ...+|.+|+||.|+.||++++++||++||+++||||||++++||++.+ +++|+|||
T Consensus 160 i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~-~~~~~Tvf 238 (271)
T smart00156 160 LKRPQEPPDEGLLIDLLWSDPDQPVDGFQPSIRGASYYFGPDAVDEFLKKNNLKLIIRAHQVVDDGYEFFH-DRKLVTIF 238 (271)
T ss_pred ccCCCCCCchhhhhheeecCCCcccCCCccCCCCCccccCHHHHHHHHHHCCCeEEEecCcccCCcEEEec-CCcEEEEE
Confidence 9999999999999999999996 578999999999999999999999999999999999999999999988 99999999
Q ss_pred cCCCCCccCCCcEEEEEEeCCCceEEEEeecC
Q 022085 255 SAPNYCYRCGNVASILSFNENMEREVKFFTET 286 (303)
Q Consensus 255 Sa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~ 286 (303)
||||||+..+|+||+|.|++++++++.+|+|.
T Consensus 239 Sa~~y~~~~~n~~a~~~i~~~~~~~~~~~~~~ 270 (271)
T smart00156 239 SAPNYCGRFGNKAAVLKVDKDLKLSFEQFKPG 270 (271)
T ss_pred CCcccccCCCceEEEEEECCCCcEEEEEecCC
Confidence 99999998899999999999999999999864
No 13
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-72 Score=493.51 Aligned_cols=301 Identities=55% Similarity=1.050 Sum_probs=291.5
Q ss_pred CHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCCcceeecCCCCHHHHHHHHHhcCCCCCceEEEecCeec
Q 022085 2 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVD 81 (303)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~ep~ll~~~~~i~viGDIHG~~~~l~~ll~~~~~~~~~~~vfLGD~VD 81 (303)
+++..|+.+.+.+++++.++..+|+.|+++|.+|.++.++..|++|+||+|||+++|.++++..|..|+..|+|+|||||
T Consensus 19 ~vd~~ie~L~~ck~lse~~v~~lc~~a~~~L~~e~nV~~v~~pvtvcGDvHGqf~dl~ELfkiGG~~pdtnylfmGDyvd 98 (319)
T KOG0371|consen 19 DVDPWIEQLYKCKPLSEVDVSSLCLLAKEILDKEENVQPVNCPVTVCGDVHGQFHDLIELFKIGGLAPDTNYLFMGDYVD 98 (319)
T ss_pred ccccchHHHHhcCCCccccchhHHHHHHHHHhccccccccccceEEecCcchhHHHHHHHHHccCCCCCcceeeeeeecc
Confidence 46788999999999999999999999999999999999999999999999999999999999889999999999999999
Q ss_pred CCCCcHHHHHHHHHhhhhCCCeEEEEcCCchhhhhhhccCChHHHHHHhCCchhhhhhhHHHhcccceeEEeceEEEEcC
Q 022085 82 RGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHG 161 (303)
Q Consensus 82 RG~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LP~~~~i~~~~l~vHg 161 (303)
||++|.|++.+|.++|.+||++|.+||||||.+.+...|||++||.++||+..+|..|.+.|+++|++++|+++++|+||
T Consensus 99 rGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~anvw~~Ftdlfdy~P~tali~~~ifc~HG 178 (319)
T KOG0371|consen 99 RGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESKIFCLHG 178 (319)
T ss_pred cccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccccchHHhhhhhhccchHhhhccceeeccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHhhhccccCCCCCCccccccCCCCCCCCCccCCCCCceeeCcchhhhhhhhCCceEEEecccccccce
Q 022085 162 GLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGL 241 (303)
Q Consensus 162 Gi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~ 241 (303)
|++|.+.++++++.+.|..++|.++.++|+|||||.+..+|..++||.|+.||++..++|-.+||+++|-|+||.+.+||
T Consensus 179 gLspsi~tld~~r~~dr~~evphegpmcDlLwsdpddr~gwg~sprgag~tfg~di~~~fn~~n~lslisRahqlvm~g~ 258 (319)
T KOG0371|consen 179 GLSPSIDTLDLIRLLDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHKNGLSLISRAHQLVMEGY 258 (319)
T ss_pred CcCcccchHHHHHHHHHhhcccCCCChhheeccCcccCCCCCCCCCCCCcccchhhHHHhhccCCchHhHHHHHHHhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEeCCCeEEEEEcCCCCCccCCCcEEEEEEeCCCceEEEEeecCCcCCCCCCCCCCCCCCC
Q 022085 242 KYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTETEENNQMRGPRTGVPYFL 303 (303)
Q Consensus 242 ~~~~~~~~~itifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (303)
.|.+ ...++|||||||||+.++|.+|+|.++++...+|.||+|+|..-.-.+.+..+||||
T Consensus 259 nW~~-~~~~vtiFSapnycYrcgn~a~i~e~d~~~~~~f~q~~psp~k~e~~vtr~tpDYfL 319 (319)
T KOG0371|consen 259 NWYH-LWNVVTIFSAPNYCYRCGNQAAIMERDDTKNYDFLQFDPSPRKVEPDVTRKTPDYFL 319 (319)
T ss_pred ceee-ecceeEEccCCchhhccccHHHHhhhhhccCcceEEecCCccccccccccCCCCCcC
Confidence 9988 888889999999999999999999999999999999999887754466688899996
No 14
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=1.5e-69 Score=510.67 Aligned_cols=286 Identities=34% Similarity=0.571 Sum_probs=258.9
Q ss_pred HHHHHHHHhcC----------CCCCHHHHHHHHHHHHHHHhhCCCccccC----CCcceeecCCCCHHHHHHHHHhcCCC
Q 022085 3 LDQWIAKVKEG----------QHLLEDELQLLCEYVKEILIEESNVQPVN----SPVTVCGDIHGQFHDLMKLFQTGGHV 68 (303)
Q Consensus 3 ~~~~~~~~~~~----------~~~~~~~~~~l~~~~~~i~~~ep~ll~~~----~~i~viGDIHG~~~~l~~ll~~~~~~ 68 (303)
++.|++.+... ..++.+++.+||++|+++|++||++++++ .+++||||||||+.+|.++|+..+++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~dL~~ll~~~g~~ 91 (377)
T cd07418 12 VHELMSVFEWSSRNLPPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFLLEDAGFP 91 (377)
T ss_pred HHHHHHHHHhcccccCchhhccCCCHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHHHHHHHHHhCCC
Confidence 67888888654 45789999999999999999999999998 79999999999999999999999987
Q ss_pred CC-ceEEEecCeecCCCCcHHHHHHHHHhhhhCCCeEEEEcCCchhhhhhhccCChHHHHHHhCC--chhhhhhhHHHhc
Q 022085 69 PE-TNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGN--ANAWRYCTDVFDY 145 (303)
Q Consensus 69 ~~-~~~vfLGD~VDRG~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~--~~~~~~~~~~f~~ 145 (303)
+. ++|||||||||||++|+||+.+++++|..+|.++++||||||.+.++..|||..|+..+|+. ..+|+.+.++|++
T Consensus 92 ~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~~~~l~~~~~~~f~~ 171 (377)
T cd07418 92 DQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDKGKHVYRKCLGCFEG 171 (377)
T ss_pred CCCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCchHHHHHHHHHHHHHh
Confidence 65 56999999999999999999999999999999999999999999999999999999999975 3699999999999
Q ss_pred ccceeEEeceEEEEcCCC---------------------------CCCCCCHHHHHhhhcc-ccCCCCC---CccccccC
Q 022085 146 LTLSAIIDGTVLCVHGGL---------------------------SPDIRTIDQIRVIERN-CEIPHEG---PFCDLMWS 194 (303)
Q Consensus 146 LP~~~~i~~~~l~vHgGi---------------------------~p~~~~~~~i~~i~r~-~~~~~~~---~~~dllWs 194 (303)
||++++++++++|||||| +|.+.++++++.++|+ .+.+.++ +++|+|||
T Consensus 172 LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~~~~~i~~dlLWS 251 (377)
T cd07418 172 LPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGSNLIPGDVLWS 251 (377)
T ss_pred CCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCCCCccccceeeEee
Confidence 999999999999999999 3456789999999997 4555554 46899999
Q ss_pred CCCCCCCCccC-CCCCceeeCcchhhhhhhhCCceEEEecccc------------cccceeEEeCC---CeEEEEEcCCC
Q 022085 195 DPEDIETWAVS-PRGAGWLFGSRVTSEFNHINNLDLVCRAHQL------------VQEGLKYMFQD---KGLVTVWSAPN 258 (303)
Q Consensus 195 dp~~~~~~~~~-~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~------------~~~G~~~~~~~---~~~itifSa~~ 258 (303)
||.+..+|.++ +||.|+.||++++++||++|++++||||||+ +++||++.+ + ++|+|||||||
T Consensus 252 DP~~~~g~~~~~~RG~g~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~-~~~~~~liTvFSa~n 330 (377)
T cd07418 252 DPSLTPGLSPNKQRGIGLLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDH-DVESGKLITLFSAPD 330 (377)
T ss_pred CCccCCCCCccCCCCCccccCHHHHHHHHHHcCCcEEEECCCCcccccccccchhhhCceEEec-cCCCCcEEEEecCCc
Confidence 99988888776 7999999999999999999999999999996 689999987 6 99999999999
Q ss_pred CC------ccCCCcEEEEEEeCC--CceEEEEeecC-CcC
Q 022085 259 YC------YRCGNVASILSFNEN--MEREVKFFTET-EEN 289 (303)
Q Consensus 259 y~------~~~~N~~avl~i~~~--~~~~~~~~~~~-~~~ 289 (303)
|| +.++|+||++.++.+ ...+|.+|+++ |++
T Consensus 331 Y~~~~~~~~~~~N~ga~~~~~~~~~~~~~~~~~~~~~~~~ 370 (377)
T cd07418 331 YPQFQATEERYNNKGAYIILQPPDFSDPQFHTFEAVKPRP 370 (377)
T ss_pred cccccccccccCcceEEEEEecCCCCCccceEeeccCCCC
Confidence 99 578999999999765 47999999998 654
No 15
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=7.6e-69 Score=499.90 Aligned_cols=271 Identities=37% Similarity=0.711 Sum_probs=253.2
Q ss_pred CCCCHHHHHHHHHHHHHHHhhCCCccccCCCcceeecCCCCHHHHHHHHHhcCCCCC--------ceEEEecCeecCCCC
Q 022085 14 QHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPE--------TNYIFMGDFVDRGYN 85 (303)
Q Consensus 14 ~~~~~~~~~~l~~~~~~i~~~ep~ll~~~~~i~viGDIHG~~~~l~~ll~~~~~~~~--------~~~vfLGD~VDRG~~ 85 (303)
..++++++.+||++|+++|++||++++++.+++||||||||+++|.++|+..+.++. .+|||||||||||++
T Consensus 19 ~~~~~~~i~~l~~~~~~il~~e~~~~~i~~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~~~~~~~vfLGDyVDRGp~ 98 (311)
T cd07419 19 FFFNWNEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGDIEYIDYLFLGDYVDRGSN 98 (311)
T ss_pred cCCCHHHHHHHHHHHHHHHHhCCCeEeeCCCEEEEEeccCCHHHHHHHHHHcCCCcccccCCCcCceEEEECCccCCCCC
Confidence 358999999999999999999999999999999999999999999999999887754 579999999999999
Q ss_pred cHHHHHHHHHhhhhCCCeEEEEcCCchhhhhhhccCChHHHHHHhCC-----chhhhhhhHHHhcccceeEEeceEEEEc
Q 022085 86 SLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGN-----ANAWRYCTDVFDYLTLSAIIDGTVLCVH 160 (303)
Q Consensus 86 s~evl~~l~~lk~~~P~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~-----~~~~~~~~~~f~~LP~~~~i~~~~l~vH 160 (303)
|+||+.++++++..+|.++++||||||.+.++..+||..++..+|+. ..+|..+.++|++||++++++++++|||
T Consensus 99 s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~f~~LPl~avi~~~~l~vH 178 (311)
T cd07419 99 SLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRLFEWLPLAAIIEDKILCMH 178 (311)
T ss_pred hHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHHHHhCchhheecccEEEEc
Confidence 99999999999999999999999999999999999999999999975 3588999999999999999999999999
Q ss_pred CCCCCCCCCHHHHHhhhccc-cCCCCCCccccccCCCCC---CCCCccCC---CCCc--eeeCcchhhhhhhhCCceEEE
Q 022085 161 GGLSPDIRTIDQIRVIERNC-EIPHEGPFCDLMWSDPED---IETWAVSP---RGAG--WLFGSRVTSEFNHINNLDLVC 231 (303)
Q Consensus 161 gGi~p~~~~~~~i~~i~r~~-~~~~~~~~~dllWsdp~~---~~~~~~~~---rg~g--~~fg~~~~~~fl~~~~~~~iI 231 (303)
||++|...++++++.+.|+. ..+.++.+.|++||||.+ ..+|.+++ ||.| +.||++++++||++||+++||
T Consensus 179 gGi~p~~~~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~rg~g~~~~fg~~~~~~Fl~~n~l~~ii 258 (311)
T cd07419 179 GGIGRSINHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKFGPDRVHRFLEENDLQMII 258 (311)
T ss_pred cCCCCCCCcHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccCCCCCCCCCcceeECHHHHHHHHHHCCCeEEE
Confidence 99999999999999999987 445667889999999985 35777766 9998 799999999999999999999
Q ss_pred ecccccccceeEEeCCCeEEEEEcCCCCCccCCCcEEEEEEeCCCceEEEEeec
Q 022085 232 RAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTE 285 (303)
Q Consensus 232 rgH~~~~~G~~~~~~~~~~itifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~ 285 (303)
||||++++||++.+ +++|+||||||+||+.++|.||||.|+++.++++++++|
T Consensus 259 RgHe~~~~G~~~~~-~~~~iTvfSa~~y~~~~~n~~ai~~i~~~~~~~~~~~~~ 311 (311)
T cd07419 259 RAHECVMDGFERFA-QGKLITLFSATNYCGTAGNAGAILVLGRDLTIIPKLIHP 311 (311)
T ss_pred EechhhhCCeEEeC-CCeEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeCC
Confidence 99999999999988 999999999999999999999999999999999999876
No 16
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=100.00 E-value=1.1e-70 Score=500.32 Aligned_cols=285 Identities=40% Similarity=0.718 Sum_probs=270.2
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCCcceeecCCCCHHHHHHHHHhcCCCCCceEEEecCeecC
Q 022085 3 LDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDR 82 (303)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~ep~ll~~~~~i~viGDIHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDR 82 (303)
.+-+-+++.+.+.++++..+.|+.++..+|++|++++++++||.|+|||||||.||.++|+..|.|...+|+||||||||
T Consensus 48 ~~~Lr~Hf~~EGrl~ee~alrIi~~~a~llr~Eknmi~v~APiTVCGDIHGQf~DLmKLFEVGG~PA~t~YLFLGDYVDR 127 (517)
T KOG0375|consen 48 HDVLRNHFIKEGRLEEEQALRIINEGAALLRQEKNMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDR 127 (517)
T ss_pred hHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCCceEeccCCeeEecccchHHHHHHHHHHccCCcccceeEeecccccc
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHhhhhCCCeEEEEcCCchhhhhhhccCChHHHHHHhCCchhhhhhhHHHhcccceeEEeceEEEEcCC
Q 022085 83 GYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGG 162 (303)
Q Consensus 83 G~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LP~~~~i~~~~l~vHgG 162 (303)
|.+|+|++.+|++||+.||..+++||||||++.+...+.|.+||..+| +..+|+++.+.|+.||+||+.++++||||||
T Consensus 128 GyFSiECvlYLwsLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKY-se~vYdaCmesFd~LPLAAlmNqQflCVHGG 206 (517)
T KOG0375|consen 128 GYFSIECVLYLWSLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMESFDCLPLAALMNQQFLCVHGG 206 (517)
T ss_pred ceeeeehHHHHHHHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhc-cHHHHHHHHHHhccchHHHHhcCceEEecCC
Confidence 999999999999999999999999999999999999999999999999 6899999999999999999999999999999
Q ss_pred CCCCCCCHHHHHhhhccccCCCCCCccccccCCCCC-------CCCCc-cCCCCCceeeCcchhhhhhhhCCceEEEecc
Q 022085 163 LSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPED-------IETWA-VSPRGAGWLFGSRVTSEFNHINNLDLVCRAH 234 (303)
Q Consensus 163 i~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~-------~~~~~-~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH 234 (303)
+||.+.++++|++++|+.++|.-+++||||||||.+ .+.|. ++.||++|.|...++++||+.||+-.|||+|
T Consensus 207 lSPEi~tl~DIr~l~RF~EpPa~GpmCDLLWsDPlEdfgnek~~e~f~hNsvRGCSyfysy~A~C~FLq~nnLLSIiRAH 286 (517)
T KOG0375|consen 207 LSPEIHTLDDIRKLDRFKEPPAFGPMCDLLWSDPLEDFGNEKTSEHFTHNSVRGCSYFYSYPAVCEFLQNNNLLSIIRAH 286 (517)
T ss_pred CCcccccHHHHHhhhhccCCCccCcchhhhccChhhhccccccccccccCccccccceechHHHHHHHHhCCchhhhhhh
Confidence 999999999999999999999999999999999973 22343 4689999999999999999999999999999
Q ss_pred cccccceeEEeCC-----CeEEEEEcCCCCCccCCCcEEEEEEeCCCceEEEEeecCCcC
Q 022085 235 QLVQEGLKYMFQD-----KGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTETEEN 289 (303)
Q Consensus 235 ~~~~~G~~~~~~~-----~~~itifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~~~~ 289 (303)
+.++.||+.+-++ ..+|||||||||.+.++|+||||+.. ++.+.++||.++||+
T Consensus 287 EAQDaGYRMYrksqttGFPSLiTiFSAPNYLDvYnNKAAvLKYE-nNVMNIRQFncSPHP 345 (517)
T KOG0375|consen 287 EAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYE-NNVMNIRQFNCSPHP 345 (517)
T ss_pred hhhhhhhhhhhcccccCCchheeeecCCchhhhhccHHHHhhhh-cccceeeccCCCCCC
Confidence 9999999886521 35899999999999999999999986 679999999999998
No 17
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-58 Score=428.64 Aligned_cols=286 Identities=32% Similarity=0.587 Sum_probs=257.9
Q ss_pred CHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccC----CCcceeecCCCCHHHHHHHHHhcCCCCC-ceEEEe
Q 022085 2 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVN----SPVTVCGDIHGQFHDLMKLFQTGGHVPE-TNYIFM 76 (303)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~ep~ll~~~----~~i~viGDIHG~~~~l~~ll~~~~~~~~-~~~vfL 76 (303)
+|+.+|+.+...+.+.+..++.|+.+|+++|++-|++-+++ ..+.|+||+||.++||.-+|-+.|.|.. ..|||.
T Consensus 120 ~i~~lieaFk~kq~LH~kYVl~iL~EakK~lkqmPnis~isTs~S~qVTiCGDLHGklDDL~~I~yKNGlPS~~npYvFN 199 (631)
T KOG0377|consen 120 HIDLLIEAFKKKQRLHPKYVLLILREAKKSLKQMPNISRISTSVSQQVTICGDLHGKLDDLLVILYKNGLPSSSNPYVFN 199 (631)
T ss_pred HHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHhCCCCCccccccccceEEeccccccccceEEEEecCCCCCCCCCeeec
Confidence 48999999999999999999999999999999999998875 4799999999999999999999999875 669999
Q ss_pred cCeecCCCCcHHHHHHHHHhhhhCCCeEEEEcCCchhhhhhhccCChHHHHHHhCC--chhhhhhhHHHhcccceeEEec
Q 022085 77 GDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGN--ANAWRYCTDVFDYLTLSAIIDG 154 (303)
Q Consensus 77 GD~VDRG~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~--~~~~~~~~~~f~~LP~~~~i~~ 154 (303)
||+||||.+|+|+|..|+++.+.||+.+++.|||||+.++|-.|||.+|...+|.. ..+...+.++|+|||++.+++.
T Consensus 200 GDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~KYk~~~k~Ilr~leevy~WLPi~tiid~ 279 (631)
T KOG0377|consen 200 GDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVESKYKRHGKRILRFLEEVYRWLPIGTIIDS 279 (631)
T ss_pred CchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHHHhhhcccHHHHHHHHHHHhcchhhhccc
Confidence 99999999999999999999999999999999999999999999999999999963 4678889999999999999999
Q ss_pred eEEEEcCCCCCCCCCHHHHHhhhcccc-----CCC------C-----------CCccccccCCCCCCCCCcc-CCCCCce
Q 022085 155 TVLCVHGGLSPDIRTIDQIRVIERNCE-----IPH------E-----------GPFCDLMWSDPEDIETWAV-SPRGAGW 211 (303)
Q Consensus 155 ~~l~vHgGi~p~~~~~~~i~~i~r~~~-----~~~------~-----------~~~~dllWsdp~~~~~~~~-~~rg~g~ 211 (303)
++|+||||+|.. +.++-+.+|.|... .|. + ..+.|++||||....|..+ .-||.|+
T Consensus 280 ~ilvvHGGiSd~-Tdl~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DImWSDP~~~~GC~pNt~RGgG~ 358 (631)
T KOG0377|consen 280 RILVVHGGISDS-TDLDLLDKIERGKYVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDIMWSDPQATMGCVPNTLRGGGC 358 (631)
T ss_pred ceEEEecCcccc-hhHHHHhhhhccceeEEecCCcccCccCCchhhhcChHHHHHHHHHHhcCcccccCCCcccccCCcc
Confidence 999999999755 56777777776421 111 0 1256899999998776555 5799999
Q ss_pred eeCcchhhhhhhhCCceEEEecccccccceeEEeCCCeEEEEEcCCCCCccCCCcEEEEEEeCCCceEEEEeecCCcC
Q 022085 212 LFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTETEEN 289 (303)
Q Consensus 212 ~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~~itifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~~~~ 289 (303)
+||++++.+||++.+++++||+|||.++||++++ |++|+|||||+||...++|+||++++.......|+||.+....
T Consensus 359 yFGpDvT~~~Lqk~~l~~liRSHECKpeGyEf~H-d~kvlTiFSASNYYe~GSNrGAYikl~~~~~PhfvQY~a~k~t 435 (631)
T KOG0377|consen 359 YFGPDVTDNFLQKHRLSYLIRSHECKPEGYEFCH-DNKVLTIFSASNYYEIGSNRGAYIKLGNQLTPHFVQYQAAKQT 435 (631)
T ss_pred eeCchHHHHHHHHhCceeeeeecccCCCcceeee-CCeEEEEEeccchheecCCCceEEEeCCCCCchHHHHHhhhhh
Confidence 9999999999999999999999999999999999 9999999999999999999999999999999999999976543
No 18
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=100.00 E-value=1e-52 Score=398.02 Aligned_cols=286 Identities=36% Similarity=0.657 Sum_probs=266.7
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccC----CCcceeecCCCCHHHHHHHHHhcCCCCC-ceEEEec
Q 022085 3 LDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVN----SPVTVCGDIHGQFHDLMKLFQTGGHVPE-TNYIFMG 77 (303)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~ep~ll~~~----~~i~viGDIHG~~~~l~~ll~~~~~~~~-~~~vfLG 77 (303)
+..+.+.+.++..++..-+-.|+..+..+++++|++++++ ..+.++||.||++.++.++++..|.++. ..++|.|
T Consensus 170 vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ylfng 249 (476)
T KOG0376|consen 170 VKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPYLFNG 249 (476)
T ss_pred HHHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcccccccC
Confidence 4455666677788899999999999999999999998875 4599999999999999999999998865 6799999
Q ss_pred CeecCCCCcHHHHHHHHHhhhhCCCeEEEEcCCchhhhhhhccCChHHHHHHhCCchhhhhhhHHHhcccceeEEeceEE
Q 022085 78 DFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVL 157 (303)
Q Consensus 78 D~VDRG~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LP~~~~i~~~~l 157 (303)
|+||||..|.|++..+++.++.+|++++++|||||+..++..|||..++..+|. +..+..+.+.|.+||++..++++++
T Consensus 250 dfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyt-e~~~~~f~~~f~~LPl~~~i~~~~~ 328 (476)
T KOG0376|consen 250 DFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYT-EEMFNLFSEVFIWLPLAHLINNKVL 328 (476)
T ss_pred ceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhH-HHHHHhhhhhhccccchhhhcCceE
Confidence 999999999999999999999999999999999999999999999999999995 5556666799999999999999999
Q ss_pred EEcCCCC-CCCCCHHHHHhhhccccCCCCCCccccccCCCCCCCCCccCCCCCceeeCcchhhhhhhhCCceEEEecccc
Q 022085 158 CVHGGLS-PDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQL 236 (303)
Q Consensus 158 ~vHgGi~-p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~ 236 (303)
.+|||+. |.-.+++++++|.|+.+.++++.+++++||||....|..+|.||.|..||.+++.+||+.|+++.|||||+.
T Consensus 329 ~~hgglf~~~~v~l~d~r~i~r~~~~~~~~~~~~~lws~pq~~~g~s~S~r~~g~~fG~d~t~~f~~~n~l~~i~rshe~ 408 (476)
T KOG0376|consen 329 VMHGGLFSPDGVTLEDFRNIDRFEQPPEEGLMCELLWSDPQPANGRSPSKRGVGLQFGPDVTERFLQDNNLDKIIRSHEV 408 (476)
T ss_pred EEecCcCCCCCccHHHHHhhhhccCCcccccccccccCCCccccCCCccccCceeeeCCCchhhHHhhcchHHHhhcccc
Confidence 9999984 556789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccceeEEeCCCeEEEEEcCCCCCccCCCcEEEEEEe-CCCceEEEEeecCCcCC
Q 022085 237 VQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFN-ENMEREVKFFTETEENN 290 (303)
Q Consensus 237 ~~~G~~~~~~~~~~itifSa~~y~~~~~N~~avl~i~-~~~~~~~~~~~~~~~~~ 290 (303)
.+.||++.+ +|+|+|||||||||+..+|+||++.++ ++.+..+++|++.|+++
T Consensus 409 ~d~gy~~eh-~g~l~tvfsapnycd~~~n~ga~i~~~~~~~~p~~~~~e~vp~~~ 462 (476)
T KOG0376|consen 409 KDEGYEVEH-SGKLITVFSAPNYCDQMGNKGAFIHLEPDDLTPNFYTFEAVPHPD 462 (476)
T ss_pred CCCceeeec-CCcEEEEecCcchhhhcCCcceEEEecCCCCccceeecccCCCCC
Confidence 999999999 999999999999999999999999999 67899999999999995
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=100.00 E-value=5.6e-37 Score=272.54 Aligned_cols=214 Identities=44% Similarity=0.721 Sum_probs=175.8
Q ss_pred ceeecCCCCHHHHHHHHHhcCCCCCceEEEecCeecCCCCcHHHHHHHHHhhhhCCCeEEEEcCCchhhhhhhccCChHH
Q 022085 46 TVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDE 125 (303)
Q Consensus 46 ~viGDIHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDRG~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~~~~~~~gf~~e 125 (303)
+|||||||++++|.++++.++..+.+++||||||||||+.+.+++.++++++.. |.++++|+||||.+.++...++..+
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~~~ 79 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFYDE 79 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCcch
Confidence 589999999999999999999888999999999999999999999999999877 8889999999999998776665433
Q ss_pred H--------HHHhCCchhhhhhhHHHhcccceeEEec-eEEEEcCCCCCCCCCHHHHHhhhccccCCCCCCccccccCCC
Q 022085 126 C--------QRKYGNANAWRYCTDVFDYLTLSAIIDG-TVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDP 196 (303)
Q Consensus 126 ~--------~~~~~~~~~~~~~~~~f~~LP~~~~i~~-~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp 196 (303)
. ...+.....+....+++..||++..++. +++|||||++|.....++.. ..+.+....+++|+||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~~~~~~~~------~~~~~~~~~~~lw~r~ 153 (225)
T cd00144 80 DEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGLPLEEQIK------EEPEDQLPEDLLWSDP 153 (225)
T ss_pred hhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCccchHHhhh------cCcccccceeeeecCC
Confidence 2 2233345677778899999999998876 89999999999976555443 2344556789999998
Q ss_pred CCCCCC-ccCCCCCceeeCcchhhhhhhhCCceEEEecccccccceeEEeCCCeEEEEEcCCCCCccCCCcEEEEE
Q 022085 197 EDIETW-AVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILS 271 (303)
Q Consensus 197 ~~~~~~-~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~~itifSa~~y~~~~~N~~avl~ 271 (303)
.....+ ..+.++. |++++..|++.++.+.|||||+++..|+.... +++++||+|++.|++..+|..+++.
T Consensus 154 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ii~GHt~~~~~~~~~~-~~~~i~IDtg~~~~~~~~~~l~~~~ 224 (225)
T cd00144 154 LELPGGFGSSRRGG----GPDAVEWFLKKNGLKLIVRGHTPVEEGYEFGH-DGNLITIDSGCNYCGGGGNKLAALV 224 (225)
T ss_pred CCCCCCCcCCCCCC----CHHHHHHHHHHCCCeEEEEcCccccCccEEcC-CCCEEEEecCCcccCCCCccEEEEe
Confidence 754332 2333433 89999999999999999999999999986545 7899999999999877777777654
No 20
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.96 E-value=1.6e-27 Score=215.58 Aligned_cols=123 Identities=24% Similarity=0.384 Sum_probs=99.2
Q ss_pred CCcceeecCCCCHHHHHHHHHhcCCC---------CCceEEEecCeecCCCCcHHHHHHHHHhhhhCCCeEEEEcCCchh
Q 022085 43 SPVTVCGDIHGQFHDLMKLFQTGGHV---------PETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHES 113 (303)
Q Consensus 43 ~~i~viGDIHG~~~~l~~ll~~~~~~---------~~~~~vfLGD~VDRG~~s~evl~~l~~lk~~~P~~v~~lrGNHE~ 113 (303)
++++||||||||++.|.++|+++++. +.+++|||||||||||+|.+|+++++++. .+.++++||||||.
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~ 78 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCN 78 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHH
Confidence 57899999999999999999998863 46899999999999999999999999885 34579999999999
Q ss_pred hhhhhccC-------ChHHHHHHhCC------chhhhhhhHHHhcccceeEEe-ceEEEEcCCCCCCC
Q 022085 114 RQLTQVYG-------FYDECQRKYGN------ANAWRYCTDVFDYLTLSAIID-GTVLCVHGGLSPDI 167 (303)
Q Consensus 114 ~~~~~~~g-------f~~e~~~~~~~------~~~~~~~~~~f~~LP~~~~i~-~~~l~vHgGi~p~~ 167 (303)
++++...+ ...++..+|.. ..+.+.+.++++++|++..+. ++++|||||+.|..
T Consensus 79 ~~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~~ 146 (245)
T PRK13625 79 KLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQDY 146 (245)
T ss_pred HHHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChHh
Confidence 98765322 12344455532 235567888999999997763 67999999998764
No 21
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.95 E-value=1.6e-27 Score=210.57 Aligned_cols=177 Identities=19% Similarity=0.281 Sum_probs=129.4
Q ss_pred ceeecCCCCHHHHHHHHHhcCC--------CCCceEEEecCeecCCCCcHHHHHHHHHhhhhC---CCeEEEEcCCchhh
Q 022085 46 TVCGDIHGQFHDLMKLFQTGGH--------VPETNYIFMGDFVDRGYNSLEVFTILLLLKARY---PANITLLRGNHESR 114 (303)
Q Consensus 46 ~viGDIHG~~~~l~~ll~~~~~--------~~~~~~vfLGD~VDRG~~s~evl~~l~~lk~~~---P~~v~~lrGNHE~~ 114 (303)
+||||||||+++|.++|+.++. .+.+.+||+||+||||+++.++++++++++... +.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 5899999999999999998875 356899999999999999999999999997653 45799999999999
Q ss_pred hhhhccCCh--HHHHHHhC----Cchh---hhhhhHHHhcccceeEEeceEEEEcCCCCCCCCCHHHHHhhhccccCCCC
Q 022085 115 QLTQVYGFY--DECQRKYG----NANA---WRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHE 185 (303)
Q Consensus 115 ~~~~~~gf~--~e~~~~~~----~~~~---~~~~~~~f~~LP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~ 185 (303)
.++..+.+. ........ .... ...+.++++.+|+...++ +++|||||++|
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~~-~~~fvHag~~~-------------------- 139 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKVN-DTLFVHGGLGP-------------------- 139 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEEC-CEEEEeCCcHH--------------------
Confidence 987544332 11111110 0111 234578999999997765 58999999822
Q ss_pred CCccccccCCCCCCCCCccCCCCCceeeCcchhhhhhhhCCceEEEecccccccceeEEeCCCeEEEEEcCC
Q 022085 186 GPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAP 257 (303)
Q Consensus 186 ~~~~dllWsdp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~~itifSa~ 257 (303)
+|++.--.+ .... .-+...+.++++.++.++||+|||+++.|....+ +|++++|.++.
T Consensus 140 ------~w~r~y~~~---~~~~----~~~~~~~~~~l~~~~~~~iv~GHTh~~~~~~~~~-~g~~i~ID~g~ 197 (208)
T cd07425 140 ------LWYRGYSKE---TSDK----ECAAAHLDKVLERLGAKRMVVGHTPQEGGIVTFC-GGKVIRIDVGM 197 (208)
T ss_pred ------HHhhHhhhh---hhhc----cchHHHHHHHHHHcCCCeEEEcCeeeecCceEEE-CCEEEEEeCCc
Confidence 343310000 0000 0012457788999999999999999999886567 99999998854
No 22
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.94 E-value=1e-25 Score=202.46 Aligned_cols=123 Identities=24% Similarity=0.485 Sum_probs=97.7
Q ss_pred CCcceeecCCCCHHHHHHHHHhcCCCC----------CceEEEecCeecCCCCcHHHHHHHHHhhhhCCCeEEEEcCCch
Q 022085 43 SPVTVCGDIHGQFHDLMKLFQTGGHVP----------ETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHE 112 (303)
Q Consensus 43 ~~i~viGDIHG~~~~l~~ll~~~~~~~----------~~~~vfLGD~VDRG~~s~evl~~l~~lk~~~P~~v~~lrGNHE 112 (303)
+|+.||||||||+++|.++|+++++.+ .+++|||||||||||+|.||+++|++++.. .++++|+||||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~~--~~~~~v~GNHE 78 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVAA--GAALCVPGNHD 78 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhhC--CcEEEEECCcH
Confidence 589999999999999999999987653 469999999999999999999999998743 46999999999
Q ss_pred hhhhhhccCC-------hHHHHHHhC--CchhhhhhhHHHhcccceeEEe-ceEEEEcCCCCCCC
Q 022085 113 SRQLTQVYGF-------YDECQRKYG--NANAWRYCTDVFDYLTLSAIID-GTVLCVHGGLSPDI 167 (303)
Q Consensus 113 ~~~~~~~~gf-------~~e~~~~~~--~~~~~~~~~~~f~~LP~~~~i~-~~~l~vHgGi~p~~ 167 (303)
.++++...+. ..++...+. ...+.....++|+.||+...++ ++++|||||+++..
T Consensus 79 ~~l~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~~ 143 (234)
T cd07423 79 NKLYRKLQGRNVKITHGLEETVAQLEAESEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEEM 143 (234)
T ss_pred HHHHHHhcCCCccccCcccchHHHHhhccHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChHh
Confidence 9987643221 123333432 2345667889999999987764 57999999987653
No 23
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.94 E-value=1.2e-25 Score=205.23 Aligned_cols=190 Identities=21% Similarity=0.282 Sum_probs=134.0
Q ss_pred CCcceeecCCCCHHHHHHHHHhcCC------CCCceEEEecCeecCCCCcHHHHHHHHHhhhhCCC-eEEEEcCCchhhh
Q 022085 43 SPVTVCGDIHGQFHDLMKLFQTGGH------VPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPA-NITLLRGNHESRQ 115 (303)
Q Consensus 43 ~~i~viGDIHG~~~~l~~ll~~~~~------~~~~~~vfLGD~VDRG~~s~evl~~l~~lk~~~P~-~v~~lrGNHE~~~ 115 (303)
.++++||||||+++.|.++++.+.. ...+.+|||||||||||+|.+|+++|.+++..+|. ++++|+||||.++
T Consensus 2 ~~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~ 81 (304)
T cd07421 2 RVVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAF 81 (304)
T ss_pred ceEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHH
Confidence 3689999999999999999986542 12467999999999999999999999999998876 6899999999886
Q ss_pred hhhccC-----------------------------------------C----------------------hHHHHHHhCC
Q 022085 116 LTQVYG-----------------------------------------F----------------------YDECQRKYGN 132 (303)
Q Consensus 116 ~~~~~g-----------------------------------------f----------------------~~e~~~~~~~ 132 (303)
+..... | ..++..+||-
T Consensus 82 l~fL~~~p~~~d~~~f~~~w~~~~~~~e~~~~~~~~~~~~~h~~g~~W~~~~~~~~~~~~~~~~~~~~~gg~~Tl~SYGv 161 (304)
T cd07421 82 AAFLGVLPRPSDGSEFKSTWKEYEKNEEREGWYKGEGFENMHLQGRRWAGKMKVTFNTVRGEPYKGSIYDARPTFESYGV 161 (304)
T ss_pred HhHhhcCCCccchhhhhhhhccccccccccccccccccccccccccchhhhccccccccccccccccccCcHHHHHHcCC
Confidence 533211 0 1345667763
Q ss_pred c--------hhhhhhhHHHhcccceeEEeceE-------------EEEcCCCCCCCCCHHHHHhhh-ccccCCCCCCccc
Q 022085 133 A--------NAWRYCTDVFDYLTLSAIIDGTV-------------LCVHGGLSPDIRTIDQIRVIE-RNCEIPHEGPFCD 190 (303)
Q Consensus 133 ~--------~~~~~~~~~f~~LP~~~~i~~~~-------------l~vHgGi~p~~~~~~~i~~i~-r~~~~~~~~~~~d 190 (303)
. .+.+...++++.||.....+ .+ +|||||+.|..+.-+|.+.+. +....|. .+
T Consensus 162 ~~~~~~l~~avP~~H~~fl~~l~~~~~~~-~~~~~~~~g~~~~~lifVHAGlrPg~pLe~Q~~~L~~~d~~~p~----~~ 236 (304)
T cd07421 162 PHGSSDLIKAVPEEHKKFLRNLVWVHEED-DVCIETEEGLKHCKLIAVHAGLEKSNSVEEQLKLLRTKDTSIPK----IA 236 (304)
T ss_pred CcchHHHHHhCCHHHHHHHHhCCceEEeC-cccccccccccccceEEEEcccCCCCChHHhhhhhhcccccccc----cc
Confidence 2 23455678899999986543 35 999999999998777776544 2222222 48
Q ss_pred cccCCCCCCCCCccCCCCCceeeCcchhhhhhhhCCceEEEecccccccceeEEeCCCeEEEEEcCCCCCc
Q 022085 191 LMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCY 261 (303)
Q Consensus 191 llWsdp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~~itifSa~~y~~ 261 (303)
++|.+. .|...++... ..-++||.||+. +... .+.-|.|-+...|.+
T Consensus 237 ~l~~R~----~f~~~~~~~~--------------~~~~~VVhGHt~-----~~~~-~~~Ri~iDtGa~~~~ 283 (304)
T cd07421 237 PLSGRK----NVWNIPQELA--------------DKKTIVVSGHHG-----KLHI-DGLRLIIDEGGGFDD 283 (304)
T ss_pred ccccch----hhhcCccccc--------------CCCeEEEECCCC-----Ccee-cCCEEEEECCCCcCC
Confidence 999983 2322222210 112789999992 2334 555577888877654
No 24
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.94 E-value=8.5e-26 Score=201.56 Aligned_cols=116 Identities=25% Similarity=0.368 Sum_probs=92.0
Q ss_pred ceeecCCCCHHHHHHHHHhcCCC--------CCceEEEecCeecCCCCcHHHHHHHHHhhhhCCCeEEEEcCCchhhhhh
Q 022085 46 TVCGDIHGQFHDLMKLFQTGGHV--------PETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLT 117 (303)
Q Consensus 46 ~viGDIHG~~~~l~~ll~~~~~~--------~~~~~vfLGD~VDRG~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~~~~ 117 (303)
+||||||||++.|.++|+++++. +.+++|||||||||||+|.+|+++++++... .++++|+||||.+++.
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~~~--~~~~~l~GNHE~~ll~ 79 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMVDA--GHALAVMGNHEFNAIA 79 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhhcC--CCEEEEEccCcHHHHH
Confidence 69999999999999999998764 5689999999999999999999999998643 4799999999999875
Q ss_pred hccCC-----------------hHHHHHHhC-CchhhhhhhHHHhcccceeEEeceEEEEcCCCC
Q 022085 118 QVYGF-----------------YDECQRKYG-NANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLS 164 (303)
Q Consensus 118 ~~~gf-----------------~~e~~~~~~-~~~~~~~~~~~f~~LP~~~~i~~~~l~vHgGi~ 164 (303)
...+- ..+..++++ .....+...++++.||++... ++++|||||+.
T Consensus 80 ~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~lP~~~~~-~~~~~VHAg~~ 143 (222)
T cd07413 80 WHTKDPSGGEWLRAHSKKNLRQHQAFLEQFREHSEEHKDWLEWFKTLPLFLDL-GGVRVVHACWD 143 (222)
T ss_pred hhhCCcccchhhhcCCCcccccHHHHHHHHhccchhHHHHHHHHhcCCcEEEE-CCEEEEECCcC
Confidence 32210 012333443 234456788999999998765 56999999985
No 25
>PHA02239 putative protein phosphatase
Probab=99.93 E-value=3.2e-25 Score=199.20 Aligned_cols=175 Identities=21% Similarity=0.324 Sum_probs=124.1
Q ss_pred CCcceeecCCCCHHHHHHHHHhcCCC--CCceEEEecCeecCCCCcHHHHHHHHHhhhhCCCeEEEEcCCchhhhhhhcc
Q 022085 43 SPVTVCGDIHGQFHDLMKLFQTGGHV--PETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVY 120 (303)
Q Consensus 43 ~~i~viGDIHG~~~~l~~ll~~~~~~--~~~~~vfLGD~VDRG~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~~~~~~~ 120 (303)
|++++|||||||++.|.++++.+... +.+.+||+|||||||++|.++++.++++.. .+.++++|+||||.+++....
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~~-~~~~~~~l~GNHE~~~l~~~~ 79 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLMS-NDDNVVTLLGNHDDEFYNIME 79 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHhh-cCCCeEEEECCcHHHHHHHHh
Confidence 57899999999999999999987532 468999999999999999999999998754 345799999999999765321
Q ss_pred C--------------ChHHHHHHhCCch------------------------------hhhhhhHHHhcccceeEEeceE
Q 022085 121 G--------------FYDECQRKYGNAN------------------------------AWRYCTDVFDYLTLSAIIDGTV 156 (303)
Q Consensus 121 g--------------f~~e~~~~~~~~~------------------------------~~~~~~~~f~~LP~~~~i~~~~ 156 (303)
+ ...++..+||... .+..+..+++.||+... .+++
T Consensus 80 ~~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~-~~~~ 158 (235)
T PHA02239 80 NVDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYK-EDKY 158 (235)
T ss_pred CchhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEE-ECCE
Confidence 1 1134556675210 11334558889999866 4569
Q ss_pred EEEcCCCCCCCCCHHHHHhhhccccCCCCCCccccccCCCCCCCCCccCCCCCceeeCcchhhhhhhhCCceEEEecccc
Q 022085 157 LCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQL 236 (303)
Q Consensus 157 l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~ 236 (303)
+|||||+.|..+..+|. ..+++|.|. | ++ ...-+.||.||++
T Consensus 159 ifVHAGi~p~~~~~~q~--------------~~~llWiR~-----f--~~-----------------~~~g~~vV~GHTp 200 (235)
T PHA02239 159 IFSHSGGVSWKPVEEQT--------------IDQLIWSRD-----F--QP-----------------RKDGFTYVCGHTP 200 (235)
T ss_pred EEEeCCCCCCCChhhCC--------------HhHeEEecc-----c--CC-----------------CCCCcEEEECCCC
Confidence 99999999886533322 268999982 2 11 1122578999999
Q ss_pred cccceeEEeCCCeEEEEEcCCCC
Q 022085 237 VQEGLKYMFQDKGLVTVWSAPNY 259 (303)
Q Consensus 237 ~~~G~~~~~~~~~~itifSa~~y 259 (303)
+..+.... .++.|.|-...-|
T Consensus 201 ~~~~~~~~--~~~~I~IDtGa~~ 221 (235)
T PHA02239 201 TDSGEVEI--NGDMLMCDVGAVF 221 (235)
T ss_pred CCCCcccc--cCCEEEeecCccc
Confidence 87665332 3445777665433
No 26
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.93 E-value=4.7e-25 Score=202.16 Aligned_cols=123 Identities=23% Similarity=0.316 Sum_probs=99.1
Q ss_pred CCcceeecCCCCHHHHHHHHHhcCCC-CCceEEEecCeecCCCCcHHHHHHHHHhhhhCCCeEEEEcCCchhhhhhhccC
Q 022085 43 SPVTVCGDIHGQFHDLMKLFQTGGHV-PETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYG 121 (303)
Q Consensus 43 ~~i~viGDIHG~~~~l~~ll~~~~~~-~~~~~vfLGD~VDRG~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~~~~~~~g 121 (303)
|+++||||||||++.|.++++++++. ..++++|+||+|||||+|.+|++++.++. .++++|+||||.+++...+|
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l~----~~~~~VlGNHD~~ll~~~~g 76 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSLG----DSAVTVLGNHDLHLLAVAAG 76 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhcC----CCeEEEecChhHHHHHhhcC
Confidence 57999999999999999999998864 56899999999999999999999998773 35899999999998876666
Q ss_pred Ch----HHHHHHhCCchhhhhhhHHHhcccceeEE-eceEEEEcCCCCCCCCC
Q 022085 122 FY----DECQRKYGNANAWRYCTDVFDYLTLSAII-DGTVLCVHGGLSPDIRT 169 (303)
Q Consensus 122 f~----~e~~~~~~~~~~~~~~~~~f~~LP~~~~i-~~~~l~vHgGi~p~~~~ 169 (303)
.. .....++-.....+...++++.+|+...+ ++++++||||++|.+..
T Consensus 77 ~~~~~~~~~l~~~l~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~~~ 129 (275)
T PRK00166 77 IKRNKKKDTLDPILEAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQWDL 129 (275)
T ss_pred CccccchhHHHHHHccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCCCH
Confidence 42 12222332223445577899999998765 56799999999998743
No 27
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.92 E-value=1.5e-24 Score=192.94 Aligned_cols=178 Identities=19% Similarity=0.238 Sum_probs=116.9
Q ss_pred CCcceeecCCCCHHHHHHHHHhcCCC-CCceEEEecCeecCCCCcHHHHHHHHHhhhhCCCeEEEEcCCchhhhhhhccC
Q 022085 43 SPVTVCGDIHGQFHDLMKLFQTGGHV-PETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYG 121 (303)
Q Consensus 43 ~~i~viGDIHG~~~~l~~ll~~~~~~-~~~~~vfLGD~VDRG~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~~~~~~~g 121 (303)
++++||||||||++.|.++|+.+++. ..++++||||+|||||+|.+|++++.+. ++++|+||||.++++...+
T Consensus 17 ~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~~------~~~~v~GNHE~~~l~~~~~ 90 (218)
T PRK11439 17 RHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEEH------WVRAVRGNHEQMALDALAS 90 (218)
T ss_pred CeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHHHHHHHHcC------CceEeeCchHHHHHHHHHC
Confidence 59999999999999999999999876 5789999999999999999999998642 4789999999998864322
Q ss_pred ChHH--------HHHHhCC--chhhhhhhHHHhcccceeEE---eceEEEEcCCCCCCCCCHHHHHhhhccccCCCCCCc
Q 022085 122 FYDE--------CQRKYGN--ANAWRYCTDVFDYLTLSAII---DGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPF 188 (303)
Q Consensus 122 f~~e--------~~~~~~~--~~~~~~~~~~f~~LP~~~~i---~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~ 188 (303)
-... ....... ...+....++++.||+...+ ++++++||||++... . +.. .+ ...
T Consensus 91 ~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p~~~-~-~~~----~~------~~~ 158 (218)
T PRK11439 91 QQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYPADV-Y-EWQ----KD------VDL 158 (218)
T ss_pred CccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCCCCc-h-hhh----cc------CCc
Confidence 1100 0011111 12334556889999998655 357999999984221 1 100 00 012
Q ss_pred cccccCCCCCCCCCccCCCCCceeeCcchhhhhhhhCCceEEEecccccccceeEEeCCCeEEEEEcCCCC
Q 022085 189 CDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNY 259 (303)
Q Consensus 189 ~dllWsdp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~~itifSa~~y 259 (303)
.+++|+++.....+. .+ ...+.+.+|.||++++.-.. .+..+-|-+.+-|
T Consensus 159 ~~~~w~r~~~~~~~~--~~---------------~~~~~~~vv~GHT~~~~~~~----~~~~i~IDtGav~ 208 (218)
T PRK11439 159 HQVLWSRSRLGERQK--GQ---------------GITGADHFWFGHTPLRHRVD----IGNLHYIDTGAVF 208 (218)
T ss_pred cceEEcChhhhhccc--cc---------------cccCCCEEEECCccCCCccc----cCCEEEEECCCCC
Confidence 467998742111110 00 11245679999999875432 2345666665544
No 28
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.92 E-value=1.4e-24 Score=197.25 Aligned_cols=120 Identities=24% Similarity=0.328 Sum_probs=98.0
Q ss_pred cceeecCCCCHHHHHHHHHhcCCC-CCceEEEecCeecCCCCcHHHHHHHHHhhhhCCCeEEEEcCCchhhhhhhccCCh
Q 022085 45 VTVCGDIHGQFHDLMKLFQTGGHV-PETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFY 123 (303)
Q Consensus 45 i~viGDIHG~~~~l~~ll~~~~~~-~~~~~vfLGD~VDRG~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~~~~~~~gf~ 123 (303)
++||||||||+++|+++|+++++. +.++++|+||||||||+|.||++++++++ .++++|+||||.++++..++..
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~~ 76 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGIK 76 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCcc
Confidence 589999999999999999999875 57999999999999999999999999886 3599999999999987666642
Q ss_pred ----HHHHHHhCCchhhhhhhHHHhcccceeEEec-eEEEEcCCCCCCCC
Q 022085 124 ----DECQRKYGNANAWRYCTDVFDYLTLSAIIDG-TVLCVHGGLSPDIR 168 (303)
Q Consensus 124 ----~e~~~~~~~~~~~~~~~~~f~~LP~~~~i~~-~~l~vHgGi~p~~~ 168 (303)
.+...++-.....+...++++++|+...+++ ++++||||++|.+.
T Consensus 77 ~~~~~~t~~~~l~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w~ 126 (257)
T cd07422 77 KPKKKDTLDDILNAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQWS 126 (257)
T ss_pred ccccHhHHHHHHhccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCCC
Confidence 1122222122334567889999999987764 79999999999874
No 29
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.91 E-value=1.2e-23 Score=185.64 Aligned_cols=170 Identities=25% Similarity=0.348 Sum_probs=116.5
Q ss_pred CCcceeecCCCCHHHHHHHHHhcCCC-CCceEEEecCeecCCCCcHHHHHHHHHhhhhCCCeEEEEcCCchhhhhhhccC
Q 022085 43 SPVTVCGDIHGQFHDLMKLFQTGGHV-PETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYG 121 (303)
Q Consensus 43 ~~i~viGDIHG~~~~l~~ll~~~~~~-~~~~~vfLGD~VDRG~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~~~~~~~g 121 (303)
+++++||||||++.+|.++++.++.. ..+.++|+|||||||+++.++++++.. .++++++||||.+++....+
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~~~~~~ 74 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAIDALRA 74 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHHhHhhC
Confidence 47899999999999999999998764 468999999999999999999998864 24899999999998876543
Q ss_pred --ChHHHHHHhCCc--------hhhhhhhHHHhcccceeEEe---ceEEEEcCCCCCCCCCHHHHHhhhccccCCCCCCc
Q 022085 122 --FYDECQRKYGNA--------NAWRYCTDVFDYLTLSAIID---GTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPF 188 (303)
Q Consensus 122 --f~~e~~~~~~~~--------~~~~~~~~~f~~LP~~~~i~---~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~ 188 (303)
...+...+++.. ..++...++++.||+...+. +++++||||+++... ...+. + +...+...
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~~~-~~~~~---~--~~~~~~~~ 148 (207)
T cd07424 75 EPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSDDW-SDGVG---A--VTLRPEDI 148 (207)
T ss_pred CCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcchh-hhhhh---c--cccCcccc
Confidence 222222233221 13455778999999998764 479999999865531 11110 0 11223345
Q ss_pred cccccCCCCCCCCCccCCCCCceeeCcchhhhhhhhCCceEEEeccccccccee
Q 022085 189 CDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLK 242 (303)
Q Consensus 189 ~dllWsdp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~ 242 (303)
.+++|++|...... +....+.+.||.||++.+.-+.
T Consensus 149 ~~~~w~~~~~~~~~------------------~~~~~~~~~iV~GHTh~~~~~~ 184 (207)
T cd07424 149 EELLWSRTRIQKAQ------------------TQPIKGVDAVVHGHTPVKRPLR 184 (207)
T ss_pred eeeeeccchhhhcC------------------ccccCCCCEEEECCCCCCcceE
Confidence 67899875321110 0011244779999999876443
No 30
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.91 E-value=5.1e-24 Score=194.18 Aligned_cols=122 Identities=22% Similarity=0.304 Sum_probs=99.3
Q ss_pred CCcceeecCCCCHHHHHHHHHhcCCC-CCceEEEecCeecCCCCcHHHHHHHHHhhhhCCCeEEEEcCCchhhhhhhccC
Q 022085 43 SPVTVCGDIHGQFHDLMKLFQTGGHV-PETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYG 121 (303)
Q Consensus 43 ~~i~viGDIHG~~~~l~~ll~~~~~~-~~~~~vfLGD~VDRG~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~~~~~~~g 121 (303)
|+++||||||||+++|.++|+++++. ..++++|+||+|||||+|++|+.++.++. .++++|+||||.+++...+|
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l~----~~~~~VlGNHD~~lL~~~~g 76 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSLG----DAVRLVLGNHDLHLLAVFAG 76 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhcC----CCeEEEEChhHHHHHHHhcC
Confidence 57899999999999999999999875 56899999999999999999999998875 35789999999999987777
Q ss_pred Ch----HHHHHHhCCchhhhhhhHHHhcccceeEEe-ceEEEEcCCCCCCCC
Q 022085 122 FY----DECQRKYGNANAWRYCTDVFDYLTLSAIID-GTVLCVHGGLSPDIR 168 (303)
Q Consensus 122 f~----~e~~~~~~~~~~~~~~~~~f~~LP~~~~i~-~~~l~vHgGi~p~~~ 168 (303)
+. .+....+-.....+...++++.+|+..... .++++||||++|.++
T Consensus 77 ~~~~~~~d~l~~~l~a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w~ 128 (279)
T TIGR00668 77 ISRNKPKDRLDPLLEAPDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQWD 128 (279)
T ss_pred CCccCchHHHHHHHHccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCCc
Confidence 52 112222212345567889999999986543 469999999999984
No 31
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.87 E-value=2.8e-21 Score=171.99 Aligned_cols=116 Identities=22% Similarity=0.237 Sum_probs=85.5
Q ss_pred CCcceeecCCCCHHHHHHHHHhcCCC-CCceEEEecCeecCCCCcHHHHHHHHHhhhhCCCeEEEEcCCchhhhhhhccC
Q 022085 43 SPVTVCGDIHGQFHDLMKLFQTGGHV-PETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYG 121 (303)
Q Consensus 43 ~~i~viGDIHG~~~~l~~ll~~~~~~-~~~~~vfLGD~VDRG~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~~~~~~~g 121 (303)
.|++||||||||+++|+++++.+.+. ..++++|+||||||||+|.++++++.+ .+++.||||||.+++.....
T Consensus 15 ~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNHE~~~~~~~~~ 88 (218)
T PRK09968 15 RHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNHEAMALDAFET 88 (218)
T ss_pred CeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECchHHHHHHHHhc
Confidence 48999999999999999999998754 568999999999999999999998853 25889999999998764321
Q ss_pred Ch-H-------HHHHHhCCc--hhhhhhhHHHhcccceeEE---eceEEEEcCCCC
Q 022085 122 FY-D-------ECQRKYGNA--NAWRYCTDVFDYLTLSAII---DGTVLCVHGGLS 164 (303)
Q Consensus 122 f~-~-------e~~~~~~~~--~~~~~~~~~f~~LP~~~~i---~~~~l~vHgGi~ 164 (303)
-. . +...+.... ........+++.||+...+ ++++++||||++
T Consensus 89 ~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p 144 (218)
T PRK09968 89 GDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYP 144 (218)
T ss_pred CChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCC
Confidence 00 0 111111100 1122334588999998765 347999999983
No 32
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.46 E-value=4.6e-13 Score=109.75 Aligned_cols=160 Identities=22% Similarity=0.187 Sum_probs=100.6
Q ss_pred CCcceeecCCCCHHHH----HHHHHhcCCCCCceEEEecCeecCCCCcHHHHHHH--HHhhhhCCCeEEEEcCCchhhhh
Q 022085 43 SPVTVCGDIHGQFHDL----MKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTIL--LLLKARYPANITLLRGNHESRQL 116 (303)
Q Consensus 43 ~~i~viGDIHG~~~~l----~~ll~~~~~~~~~~~vfLGD~VDRG~~s~evl~~l--~~lk~~~P~~v~~lrGNHE~~~~ 116 (303)
+||++|||+|+..... ..+.......+.+.+|++||++|+|..+.+..... .......+..+++++||||....
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~ 80 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSG 80 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhcccccccccccccccee
Confidence 4789999999999987 34444444566789999999999999887777654 44444555679999999999876
Q ss_pred hhccCChHHHHHH---------------------------------hCCchhhhhhhHHHhcccceeEEeceEEEEcCCC
Q 022085 117 TQVYGFYDECQRK---------------------------------YGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGL 163 (303)
Q Consensus 117 ~~~~gf~~e~~~~---------------------------------~~~~~~~~~~~~~f~~LP~~~~i~~~~l~vHgGi 163 (303)
...+......... ...................+.-....++++|.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~H~p~ 160 (200)
T PF00149_consen 81 NSFYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEAKNDDPVIVFTHHPP 160 (200)
T ss_dssp HHHHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHEEEESEEEEEESSSS
T ss_pred ccccccccccccccccccccccccCcceeeecccccccccccccccccccccchhcccccccccccccccceeEEEecCC
Confidence 4432221111100 0000011111112222222333456799999988
Q ss_pred CCCCCCHHHHHhhhccccCCCCCCccccccCCCCCCCCCccCCCCCceeeCcchhhhhhhhCCceEEEeccccc
Q 022085 164 SPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLV 237 (303)
Q Consensus 164 ~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~ 237 (303)
.+........ .....+.+.+..++++.++++++.||+..
T Consensus 161 ~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~~~v~~~~~GH~H~ 199 (200)
T PF00149_consen 161 YSSSSDSSSY-----------------------------------GNESKGREALEELLKKYNVDLVLSGHTHR 199 (200)
T ss_dssp STTSSSTHHH-----------------------------------SSEEEHHHHHHHHHHHTTCSEEEEESSSS
T ss_pred CCcccccccc-----------------------------------chhhccHHHHHHHHhhCCCCEEEeCceec
Confidence 7664332211 12245667889999999999999999975
No 33
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.36 E-value=2.8e-11 Score=101.39 Aligned_cols=60 Identities=27% Similarity=0.337 Sum_probs=49.1
Q ss_pred CcceeecCCCCHHHHHHHHHhcCCCCCceEEEecCeecCCCCcHHHHHHHHHhhhhCCCeEEEEcCCchhhh
Q 022085 44 PVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQ 115 (303)
Q Consensus 44 ~i~viGDIHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDRG~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~~ 115 (303)
++.++||+||+...+.++++.+.. .+.++++||++++++.+. ++.. ..++.++||||...
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~--------~~~~--~~~~~V~GNhD~~~ 60 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VDLIIHAGDVLYPGPLNE--------LELK--APVIAVRGNCDGEV 60 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CCEEEECCccccccccch--------hhcC--CcEEEEeCCCCCcC
Confidence 578999999999999999988654 789999999999998655 1222 34899999999854
No 34
>PRK09453 phosphodiesterase; Provisional
Probab=99.34 E-value=3.9e-11 Score=103.60 Aligned_cols=69 Identities=20% Similarity=0.265 Sum_probs=55.9
Q ss_pred CCcceeecCCCCHHHHHHHHHhcCCCCCceEEEecCeecCCCC--------cHHHHHHHHHhhhhCCCeEEEEcCCchhh
Q 022085 43 SPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYN--------SLEVFTILLLLKARYPANITLLRGNHESR 114 (303)
Q Consensus 43 ~~i~viGDIHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDRG~~--------s~evl~~l~~lk~~~P~~v~~lrGNHE~~ 114 (303)
|++.++||+||++.++.++++.+...+.+.++++||++|+|+. +.++++.+..+. ..+++++||||..
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~~----~~v~~V~GNhD~~ 76 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAYA----DKIIAVRGNCDSE 76 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhcC----CceEEEccCCcch
Confidence 6899999999999999999988765667899999999999873 456666664432 3499999999975
Q ss_pred h
Q 022085 115 Q 115 (303)
Q Consensus 115 ~ 115 (303)
.
T Consensus 77 ~ 77 (182)
T PRK09453 77 V 77 (182)
T ss_pred h
Confidence 4
No 35
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.29 E-value=1.2e-10 Score=98.26 Aligned_cols=63 Identities=22% Similarity=0.207 Sum_probs=49.7
Q ss_pred CCcceeecCCCCHHHHHHHHHhcCCC-CCceEEEecCeecCCCCcHHHHHHHHHhhhhCCCeEEEEcCCchhh
Q 022085 43 SPVTVCGDIHGQFHDLMKLFQTGGHV-PETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESR 114 (303)
Q Consensus 43 ~~i~viGDIHG~~~~l~~ll~~~~~~-~~~~~vfLGD~VDRG~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~ 114 (303)
|++.++||+||+..++..+++..... ..+.++++||++ +.+++..+.++. ..++.++||||..
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~-----~~~~~~~l~~~~----~~~~~V~GN~D~~ 64 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLT-----SPFVLKEFEDLA----AKVIAVRGNNDGE 64 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCC-----CHHHHHHHHHhC----CceEEEccCCCch
Confidence 57999999999998877776665554 678999999998 457777765543 2389999999984
No 36
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.24 E-value=1.3e-10 Score=96.60 Aligned_cols=125 Identities=24% Similarity=0.308 Sum_probs=80.4
Q ss_pred CCcceeecCCCCHHHHHHHHHhcCCCCCceEEEecCeecCCCCcHHHHHHHHHhhhhCCCeEEEEcCCchhhhhhhccCC
Q 022085 43 SPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGF 122 (303)
Q Consensus 43 ~~i~viGDIHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDRG~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~~~~~~~gf 122 (303)
||++++||+|++...+.++++.+ ...+.++++||++|+ .++++.+... .++.++||||..........
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~----~~~~~~~~~~------~~~~v~GNHD~~~~~~~~~~ 68 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP----EEVLELLRDI------PVYVVRGNHDNWAFPNENDE 68 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH----HHHHHHHHHH------EEEEE--CCHSTHHHSEECT
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH----HHHHHHHhcC------CEEEEeCCcccccchhhhhc
Confidence 68999999999999999999988 347889999999993 6777776544 49999999996553222110
Q ss_pred hHHHHHHhCCchhhhhhhHHHhcccceeEEeceEEEEcCCCCCCCCCHHHHHhhhccccCCCCCCccccccCCCCCCCCC
Q 022085 123 YDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETW 202 (303)
Q Consensus 123 ~~e~~~~~~~~~~~~~~~~~f~~LP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~ 202 (303)
.. +....... ..+.+++++||......
T Consensus 69 -----------~~------~~~~~~~~-~~~~~i~~~H~~~~~~~----------------------------------- 95 (156)
T PF12850_consen 69 -----------EY------LLDALRLT-IDGFKILLSHGHPYDVQ----------------------------------- 95 (156)
T ss_dssp -----------CS------SHSEEEEE-ETTEEEEEESSTSSSST-----------------------------------
T ss_pred -----------cc------cccceeee-ecCCeEEEECCCCcccc-----------------------------------
Confidence 00 11111111 12568999999653310
Q ss_pred ccCCCCCceeeCcchhhhhhhhCCceEEEeccccccccee
Q 022085 203 AVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLK 242 (303)
Q Consensus 203 ~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~ 242 (303)
.+.+.+.+.+...+.++++.||...+.-.+
T Consensus 96 ----------~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 125 (156)
T PF12850_consen 96 ----------WDPAELREILSRENVDLVLHGHTHRPQVFK 125 (156)
T ss_dssp ----------TTHHHHHHHHHHTTSSEEEESSSSSEEEEE
T ss_pred ----------cChhhhhhhhcccCCCEEEcCCcccceEEE
Confidence 122345566678899999999998855443
No 37
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=99.14 E-value=3.1e-10 Score=101.96 Aligned_cols=157 Identities=18% Similarity=0.220 Sum_probs=100.0
Q ss_pred CcceeecCCCCHHHHH-HHHHhcCCCCCceEEEecCeecCCCCcHHHHHHHHHhhhhCCCeEEEEcCCchhhhhhh----
Q 022085 44 PVTVCGDIHGQFHDLM-KLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQ---- 118 (303)
Q Consensus 44 ~i~viGDIHG~~~~l~-~ll~~~~~~~~~~~vfLGD~VDRG~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~~~~~---- 118 (303)
+|+++|||||++.... +.++. ...|.++++||+++. +.+++..+.++. + .+++++||||.+....
T Consensus 2 rIa~isDiHg~~~~~~~~~l~~---~~pD~Vl~~GDi~~~---~~~~~~~l~~l~--~--p~~~V~GNHD~~~~~~~~~k 71 (238)
T cd07397 2 RIAIVGDVHGQWDLEDIKALHL---LQPDLVLFVGDFGNE---SVQLVRAISSLP--L--PKAVILGNHDAWYDATFRKK 71 (238)
T ss_pred EEEEEecCCCCchHHHHHHHhc---cCCCEEEECCCCCcC---hHHHHHHHHhCC--C--CeEEEcCCCcccccccccch
Confidence 6899999999987642 23332 345899999999863 567777665542 3 3899999999754320
Q ss_pred ----------------cc----------------C--------Ch-HHHHHHhCCchhhhhhhHHHhcccceeEEeceEE
Q 022085 119 ----------------VY----------------G--------FY-DECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVL 157 (303)
Q Consensus 119 ----------------~~----------------g--------f~-~e~~~~~~~~~~~~~~~~~f~~LP~~~~i~~~~l 157 (303)
.+ + +. .++...|+..+.++.+...++.++.+.-....+|
T Consensus 72 ~~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~ive~~~~~~~~~~~Vl 151 (238)
T cd07397 72 GDRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRIIAAAKKAPPDLPLIL 151 (238)
T ss_pred HHHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHHHHhhhcCCCCCeEE
Confidence 00 0 01 2566677766777788888888864333345799
Q ss_pred EEcCCCCCCCCCHHHHHhhhccccCCCCCCccccccCCCCCCCCCccCCCCCceeeCcchhhhhhhhCC----ceEEEec
Q 022085 158 CVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINN----LDLVCRA 233 (303)
Q Consensus 158 ~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~----~~~iIrg 233 (303)
+.|++++-.....+++ | ...|.+. |..+|...+.+.++... .++++-|
T Consensus 152 iaH~~~~G~g~~~~~~---------------c---------g~d~~~~----~~~~G~~~l~~ai~~~~~~~~~~l~~fG 203 (238)
T cd07397 152 LAHNGPSGLGSDAEDP---------------C---------GRDWKPP----GGDWGDPDLALAISQIQQGRQVPLVVFG 203 (238)
T ss_pred EeCcCCcCCCcccccc---------------c---------ccccCCc----CCCCCCHHHHHHHHHHhccCCCCEEEeC
Confidence 9999975442211100 1 1223321 12467777766666544 7999999
Q ss_pred ccccc
Q 022085 234 HQLVQ 238 (303)
Q Consensus 234 H~~~~ 238 (303)
|-...
T Consensus 204 H~H~~ 208 (238)
T cd07397 204 HMHHR 208 (238)
T ss_pred CccCc
Confidence 98765
No 38
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=99.13 E-value=1.9e-10 Score=94.43 Aligned_cols=118 Identities=22% Similarity=0.195 Sum_probs=80.5
Q ss_pred CcceeecCCCCHHHHHHHHHhcCCCCCceEEEecCeecCCCCcH--HHHHHHHHhhhhCCCeEEEEcCCchhhhhhhccC
Q 022085 44 PVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSL--EVFTILLLLKARYPANITLLRGNHESRQLTQVYG 121 (303)
Q Consensus 44 ~i~viGDIHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDRG~~s~--evl~~l~~lk~~~P~~v~~lrGNHE~~~~~~~~g 121 (303)
++.++||+||+.. .....+.+.++++||+++++..+. +.+.++.+++ .| .+++++||||....
T Consensus 1 ~i~~isD~H~~~~-------~~~~~~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~--~~-~~~~v~GNHD~~~~----- 65 (135)
T cd07379 1 RFVCISDTHSRHR-------TISIPDGDVLIHAGDLTERGTLEELQKFLDWLKSLP--HP-HKIVIAGNHDLTLD----- 65 (135)
T ss_pred CEEEEeCCCCCCC-------cCcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhCC--CC-eEEEEECCCCCcCC-----
Confidence 4789999999986 223355788999999999986432 2444444332 22 36789999996421
Q ss_pred ChHHHHHHhCCchhhhhhhHHHhcccceeEEeceEEEEcCCCCCCCCCHHHHHhhhccccCCCCCCccccccCCCCCCCC
Q 022085 122 FYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIET 201 (303)
Q Consensus 122 f~~e~~~~~~~~~~~~~~~~~f~~LP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~ 201 (303)
.-+.+++++||.+.+.. + ..+.
T Consensus 66 -----------------------------~~~~~ilv~H~~p~~~~---~-------------------~~~~------- 87 (135)
T cd07379 66 -----------------------------PEDTDILVTHGPPYGHL---D-------------------LVSS------- 87 (135)
T ss_pred -----------------------------CCCCEEEEECCCCCcCc---c-------------------cccc-------
Confidence 12457999999532110 0 0000
Q ss_pred CccCCCCCceeeCcchhhhhhhhCCceEEEeccccccccee
Q 022085 202 WAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLK 242 (303)
Q Consensus 202 ~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~ 242 (303)
....|.+.+.+++++.+.++++.||+..+.|++
T Consensus 88 --------~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 120 (135)
T cd07379 88 --------GQRVGCEELLNRVQRVRPKLHVFGHIHEGYGAE 120 (135)
T ss_pred --------CcccCCHHHHHHHHHHCCcEEEEcCcCCcCcee
Confidence 113577888999999999999999999998886
No 39
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=99.13 E-value=2e-10 Score=93.74 Aligned_cols=143 Identities=45% Similarity=0.807 Sum_probs=118.4
Q ss_pred hhhccCChHHHHHHhCCchhhhh---hhHHHhcccceeEEec-eEEEEcCCCCCCC-CCHHHHHhhhccc--cCCCCCCc
Q 022085 116 LTQVYGFYDECQRKYGNANAWRY---CTDVFDYLTLSAIIDG-TVLCVHGGLSPDI-RTIDQIRVIERNC--EIPHEGPF 188 (303)
Q Consensus 116 ~~~~~gf~~e~~~~~~~~~~~~~---~~~~f~~LP~~~~i~~-~~l~vHgGi~p~~-~~~~~i~~i~r~~--~~~~~~~~ 188 (303)
+...+++..++...++....|.. ..++|+.+|+++++.+ .++|.|++++|.. ...++++.+.|.. .....+..
T Consensus 3 l~~~~~~~~~~~~~~~~~~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~ 82 (155)
T COG0639 3 LTALYGFYDEKLRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRLLDIIEVLDRLRACEVPHAGHT 82 (155)
T ss_pred hhhhhchhHHhhhhcCCceeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcchhhhHHHHHHHhhhhcccCCCcccc
Confidence 44556777777777754445666 8999999999998888 8999999999975 6778888888776 67777778
Q ss_pred cccccCCCCC--CCCCccCCCCCceeeCcchhhhhhhhCCceEEEecccccccceeEEeCCCeEEEEEcCCCCC
Q 022085 189 CDLMWSDPED--IETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYC 260 (303)
Q Consensus 189 ~dllWsdp~~--~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~~itifSa~~y~ 260 (303)
.+.+|++|.. ...|.++++|.+..+ .+....|...+..+.+.++|+....++...+ ++..+|.|++++|+
T Consensus 83 ~~~~~~~~~~~~~~~w~~~~~g~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~~d~~~~~-~~~~lt~~~~~~~~ 154 (155)
T COG0639 83 HDLLWSDPDGGDRRIWNPGPRGVPRDG-GDVTAVFGIVHTPKLIERAHVLYDIDTGAVF-GGGLLTAFSAPNYC 154 (155)
T ss_pred ccccCCCCCCCcccccccCCCCCCccc-cchhhHHhhhcccceEEEEeEEEecCceEEe-CCCeeeEEeccccc
Confidence 8889999884 688999999998766 7888899988888889999999999999877 54889999999986
No 40
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=99.07 E-value=7.4e-09 Score=92.53 Aligned_cols=72 Identities=13% Similarity=0.188 Sum_probs=59.2
Q ss_pred CCCcceeecCCCCHHHHHHHHHhcCCCCCceEEEecCeecCCCCcHHHHHHHHHhhhhCCCeEEEEcCCchhh
Q 022085 42 NSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESR 114 (303)
Q Consensus 42 ~~~i~viGDIHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDRG~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~ 114 (303)
.+++.+++|+||++..+.++++.......+.+|.+||++++|+..-++..++..+.... ..+++++||||..
T Consensus 4 ~~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~l~-~pv~~V~GNhD~~ 75 (224)
T cd07388 4 VRYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGEAH-LPTFYVPGPQDAP 75 (224)
T ss_pred eeEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhcC-CceEEEcCCCChH
Confidence 36799999999999999999987655567899999999999977777777776665432 2489999999985
No 41
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.97 E-value=3.7e-08 Score=85.03 Aligned_cols=59 Identities=22% Similarity=0.428 Sum_probs=42.5
Q ss_pred CcceeecCC-CCHH-----HHHHHHHhcCCCCCceEEEecCeecCCCCcHHHHHHHHHhhhhCCCeEEEEcCCchhh
Q 022085 44 PVTVCGDIH-GQFH-----DLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESR 114 (303)
Q Consensus 44 ~i~viGDIH-G~~~-----~l~~ll~~~~~~~~~~~vfLGD~VDRG~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~ 114 (303)
+|.||||.| |.-. .+.++++. .+.+.++.+||+++ .+++.++..+. + .++.++||||..
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~---~~~d~iih~GDi~~-----~~~~~~l~~~~---~-~~~~V~GN~D~~ 65 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVP---GKIQHVLCTGNLCS-----KETYDYLKTIA---P-DVHIVRGDFDEN 65 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhcc---CCCCEEEECCCCCC-----HHHHHHHHhhC---C-ceEEEECCCCcc
Confidence 478999999 6533 24444433 45689999999987 67777775543 2 489999999973
No 42
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.87 E-value=5.4e-09 Score=88.58 Aligned_cols=67 Identities=19% Similarity=0.145 Sum_probs=47.5
Q ss_pred cceeecCCCCHHHHHHHH-HhcCCCCCceEEEecCeecCCCCcHHHHHHHHHhhhhCCCeEEEEcCCchhh
Q 022085 45 VTVCGDIHGQFHDLMKLF-QTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESR 114 (303)
Q Consensus 45 i~viGDIHG~~~~l~~ll-~~~~~~~~~~~vfLGD~VDRG~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~ 114 (303)
+.++||+|+........+ +.....+.+.++++||+++++..+..+. ++... ..+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~~~~~~-~~~~~--~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDAPRFAP-LLLAL--KGFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcchHHHHH-HHHhh--cCCccEEEeCCCcceE
Confidence 468999999987776554 2233455688999999999987665543 22222 2334699999999986
No 43
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.86 E-value=1.5e-08 Score=80.25 Aligned_cols=117 Identities=25% Similarity=0.319 Sum_probs=83.1
Q ss_pred ceeecCCCCHHHHHHHH--HhcCCCCCceEEEecCeecCCCCcHHHHHHHHHhhhhCCCeEEEEcCCchhhhhhhccCCh
Q 022085 46 TVCGDIHGQFHDLMKLF--QTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFY 123 (303)
Q Consensus 46 ~viGDIHG~~~~l~~ll--~~~~~~~~~~~vfLGD~VDRG~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~~~~~~~gf~ 123 (303)
+++||+|+......... ........+.+|++||+++.+....+...............++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD----------- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD----------- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce-----------
Confidence 47999999998887765 33344566889999999999988777655422223333446999999999
Q ss_pred HHHHHHhCCchhhhhhhHHHhcccceeEEeceEEEEcCCCCCCCCCHHHHHhhhccccCCCCCCccccccCCCCCCCCCc
Q 022085 124 DECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWA 203 (303)
Q Consensus 124 ~e~~~~~~~~~~~~~~~~~f~~LP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~ 203 (303)
++++|+.+.+...... +..
T Consensus 70 --------------------------------i~~~H~~~~~~~~~~~---------------------~~~-------- 88 (131)
T cd00838 70 --------------------------------ILLTHGPPYDPLDELS---------------------PDE-------- 88 (131)
T ss_pred --------------------------------EEEeccCCCCCchhhc---------------------ccc--------
Confidence 8899997754432110 000
Q ss_pred cCCCCCceeeCcchhhhhhhhCCceEEEeccccccccee
Q 022085 204 VSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLK 242 (303)
Q Consensus 204 ~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~ 242 (303)
......+...+...+.+.++.||+.....+.
T Consensus 89 --------~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 89 --------DPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred --------hhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 0045667788888999999999999876654
No 44
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.85 E-value=8.1e-08 Score=86.63 Aligned_cols=212 Identities=13% Similarity=0.102 Sum_probs=107.7
Q ss_pred CCcceeecCCCCH------HHHHHHHHhcCCCCCceEEEecCeecC--C-----CCcHHHHHHHHHhhhhCCCeEEEEcC
Q 022085 43 SPVTVCGDIHGQF------HDLMKLFQTGGHVPETNYIFMGDFVDR--G-----YNSLEVFTILLLLKARYPANITLLRG 109 (303)
Q Consensus 43 ~~i~viGDIHG~~------~~l~~ll~~~~~~~~~~~vfLGD~VDR--G-----~~s~evl~~l~~lk~~~P~~v~~lrG 109 (303)
|++++|+|+|... ..+.+.++.. ....+.++++||++|. | +...+++.++..++.. +..+++++|
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~-~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~-g~~v~~v~G 78 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGE-ARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDS-GVPCYFMHG 78 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhh-hccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHc-CCeEEEEeC
Confidence 6899999999542 2344555332 2346889999999985 2 2345677777777643 235999999
Q ss_pred CchhhhhhhccCChHHHHHHhCCchhhhhhhHHHhccccee--EE-eceEEEEcCCCCCCCC-CHHHHHhhhccccC---
Q 022085 110 NHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSA--II-DGTVLCVHGGLSPDIR-TIDQIRVIERNCEI--- 182 (303)
Q Consensus 110 NHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LP~~~--~i-~~~~l~vHgGi~p~~~-~~~~i~~i~r~~~~--- 182 (303)
|||.... ....+..|- ..+|-.. .+ +.+++++||-.-+... .....+++-|....
T Consensus 79 NHD~~~~-------~~~~~~~g~-----------~~l~~~~~~~~~g~~i~l~HGd~~~~~d~~y~~~r~~~r~~~~~~~ 140 (241)
T PRK05340 79 NRDFLLG-------KRFAKAAGM-----------TLLPDPSVIDLYGQRVLLLHGDTLCTDDKAYQRFRRKVRNPWLQWL 140 (241)
T ss_pred CCchhhh-------HHHHHhCCC-----------EEeCCcEEEEECCEEEEEECCcccccCCHHHHHHHHHHhCHHHHHH
Confidence 9997432 111122221 1222221 22 5579999997654221 11112222221000
Q ss_pred CCCCCccccccCCCCCCCCCcc-----CCCCCc--eeeCcchhhhhhhhCCceEEEecccccccceeEEeCCCeEEEEEc
Q 022085 183 PHEGPFCDLMWSDPEDIETWAV-----SPRGAG--WLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWS 255 (303)
Q Consensus 183 ~~~~~~~dllWsdp~~~~~~~~-----~~rg~g--~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~~itifS 255 (303)
....+....+|-- +.+.. +.+... .-..++.+.+.+++.+.+.+|.||...+.=..... ++.-++-.+
T Consensus 141 ~~~~p~~~~~~ia----~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~~~~-~~~~~~~~~ 215 (241)
T PRK05340 141 FLALPLSIRLRIA----AKMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAIHQLQA-GGQPATRIV 215 (241)
T ss_pred HHhCCHHHHHHHH----HHHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcceeeccC-CCcceEEEE
Confidence 0000000001100 00000 000011 12344667788889999999999998865443322 321122222
Q ss_pred CCCCCccCCCcEEEEEEeCCCceEEEEee
Q 022085 256 APNYCYRCGNVASILSFNENMEREVKFFT 284 (303)
Q Consensus 256 a~~y~~~~~N~~avl~i~~~~~~~~~~~~ 284 (303)
-+.. ...+.++.++++ ..+++.|.
T Consensus 216 lgdw----~~~~~~~~~~~~-~~~~~~~~ 239 (241)
T PRK05340 216 LGDW----HEQGSVLKVDAD-GVELIPFP 239 (241)
T ss_pred eCCC----CCCCeEEEEECC-ceEEEeCC
Confidence 2222 124788888865 45665553
No 45
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=98.82 E-value=9.9e-08 Score=81.61 Aligned_cols=66 Identities=20% Similarity=0.270 Sum_probs=47.2
Q ss_pred cceeecCCCCHHHHHHHHHhcCCCCCceEEEecCeecCCCCc-HHHHHHHHHhhhhCCCeEEEEcCCchhhhh
Q 022085 45 VTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNS-LEVFTILLLLKARYPANITLLRGNHESRQL 116 (303)
Q Consensus 45 i~viGDIHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDRG~~s-~evl~~l~~lk~~~P~~v~~lrGNHE~~~~ 116 (303)
|.++||+||++..+.+ ......+.+.+|++||++++|... .+.+..+.+ .+..++.++||||....
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~l~~----~~~p~~~v~GNHD~~~~ 67 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAEEADAVIVAGDITNFGGKEAAVEINLLLA----IGVPVLAVPGNCDTPEI 67 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhccCCCEEEECCCccCcCCHHHHHHHHHHHh----cCCCEEEEcCCCCCHHH
Confidence 5789999999998876 333344568999999999999753 333333322 23348999999997543
No 46
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.74 E-value=5.5e-08 Score=87.21 Aligned_cols=207 Identities=11% Similarity=0.073 Sum_probs=100.6
Q ss_pred cceeecCCCCH------HHHHHHHHhcCCCCCceEEEecCeecCC-----CC--cHHHHHHHHHhhhhCCCeEEEEcCCc
Q 022085 45 VTVCGDIHGQF------HDLMKLFQTGGHVPETNYIFMGDFVDRG-----YN--SLEVFTILLLLKARYPANITLLRGNH 111 (303)
Q Consensus 45 i~viGDIHG~~------~~l~~ll~~~~~~~~~~~vfLGD~VDRG-----~~--s~evl~~l~~lk~~~P~~v~~lrGNH 111 (303)
+++++|+|... ..+.+.+.... ...+.++++||++|.. +. ..++...+..|+.. +..+++++|||
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~-~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~-~~~v~~v~GNH 78 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEA-RKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQ-GVPCYFMHGNR 78 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhh-ccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHC-CCeEEEEcCCC
Confidence 36899999542 23444443322 2568899999999952 11 13456666666543 34599999999
Q ss_pred hhhhhhhccCChHHHHHHhCCchhhhhhhHHHhcccceeEEeceEEEEcCCCCCCC-CCHHHHHhhhccc-------cCC
Q 022085 112 ESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDI-RTIDQIRVIERNC-------EIP 183 (303)
Q Consensus 112 E~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LP~~~~i~~~~l~vHgGi~p~~-~~~~~i~~i~r~~-------~~~ 183 (303)
|...-. ...+..|- .++..--...+-+.+++++||-.-..- ......+++-|.. ..|
T Consensus 79 D~~~~~-------~~~~~~gi--------~~l~~~~~~~~~g~~ill~HGd~~~~~d~~y~~~r~~~r~~~~~~~~~~l~ 143 (231)
T TIGR01854 79 DFLIGK-------RFAREAGM--------TLLPDPSVIDLYGQKVLLMHGDTLCTDDTAYQAFRAKVHQPWLQRLFLHLP 143 (231)
T ss_pred chhhhH-------HHHHHCCC--------EEECCCEEEEECCEEEEEEcCccccCCCHHHHHHHHHHhCHHHHHHHHhCC
Confidence 975311 11111110 111111111122578999999643211 1111122221210 000
Q ss_pred CC--CCccccccCCCCCCCCCccCCCCCceeeCcchhhhhhhhCCceEEEecccccccceeEEeCCCeEEEEEcCCCCCc
Q 022085 184 HE--GPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCY 261 (303)
Q Consensus 184 ~~--~~~~dllWsdp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~~itifSa~~y~~ 261 (303)
.. ..+...+++........ .+. .-....+..+.+.++..+.+++|.||+..+.=+.... ++.-.+-.+-++..
T Consensus 144 ~~~r~~l~~~~~~~s~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~i~GHtH~~~~~~~~~-~~~~~~~~~lgdW~- 218 (231)
T TIGR01854 144 LAVRVKLARKIRAESRADKQM--KSQ-DIMDVNPAEVAAVMRRYGVDRLIHGHTHRPAIHPLQA-DGQPATRIVLGDWY- 218 (231)
T ss_pred HHHHHHHHHHHHHHHHHhcCC--Ccc-hhhCCCHHHHHHHHHHcCCCEEEECCccCcceeeccc-CCCccEEEEECCCc-
Confidence 00 00111222211100000 000 0112345677888889999999999998866554432 33222334444432
Q ss_pred cCCCcEEEEEEeCCC
Q 022085 262 RCGNVASILSFNENM 276 (303)
Q Consensus 262 ~~~N~~avl~i~~~~ 276 (303)
..+.++.+++++
T Consensus 219 ---~~~~~~~~~~~g 230 (231)
T TIGR01854 219 ---RQGSILRVDADG 230 (231)
T ss_pred ---cCCeEEEEcCCC
Confidence 236677777654
No 47
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=98.73 E-value=4.8e-07 Score=79.83 Aligned_cols=211 Identities=17% Similarity=0.169 Sum_probs=123.3
Q ss_pred CCCcceeecCCCCHHHHHHHHHhcCCCCCceEEEecCee--cCCCCcHHHHHH--HHHhhhhCCCeEEEEcCCchhhhhh
Q 022085 42 NSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFV--DRGYNSLEVFTI--LLLLKARYPANITLLRGNHESRQLT 117 (303)
Q Consensus 42 ~~~i~viGDIHG~~~~l~~ll~~~~~~~~~~~vfLGD~V--DRG~~s~evl~~--l~~lk~~~P~~v~~lrGNHE~~~~~ 117 (303)
.+++.++.|+||..+.+.++++..+....+.+++.||+. ++|+.-. +.+. +..++.. -..++.++||-|...+.
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~-~~~~~~~e~l~~~-~~~v~avpGNcD~~~v~ 80 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEV-AEELNKLEALKEL-GIPVLAVPGNCDPPEVI 80 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchHH-HHhhhHHHHHHhc-CCeEEEEcCCCChHHHH
Confidence 478999999999999999999998877889999999999 8887432 2222 3444422 23599999998886542
Q ss_pred hccCChHHHHHHhCCchhhhhhhHHHhcccceeEEeceEEEEcCCCCCCC-C-----CHHHHHhhhcc-ccCCCCCCccc
Q 022085 118 QVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDI-R-----TIDQIRVIERN-CEIPHEGPFCD 190 (303)
Q Consensus 118 ~~~gf~~e~~~~~~~~~~~~~~~~~f~~LP~~~~i~~~~l~vHgGi~p~~-~-----~~~~i~~i~r~-~~~~~~~~~~d 190 (303)
. .....+. .+ .. -.-.+++--+|-=||..|.. . +.++|....+. .+...+..---
T Consensus 81 ~-------~l~~~~~-~v--------~~--~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~~~~~Il 142 (226)
T COG2129 81 D-------VLKNAGV-NV--------HG--RVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKADNPVNIL 142 (226)
T ss_pred H-------HHHhccc-cc--------cc--ceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhcccCcceEE
Confidence 1 1111110 00 00 01112333444445544321 1 12333222211 11110000000
Q ss_pred cccCCCCCCCCCccCCCCCceeeCcchhhhhhhhCCceEEEecccccccceeEEeCCCeEEEEEcCCCCCccCCCcEEEE
Q 022085 191 LMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASIL 270 (303)
Q Consensus 191 llWsdp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~~itifSa~~y~~~~~N~~avl 270 (303)
++..-|-....- .+.| -..-|+.+++++.++.+-.+.++||-....|... -|. ||+..|+-.+ .-+.|++
T Consensus 143 ~~HaPP~gt~~d--~~~g-~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~---iG~--TivVNPG~~~--~g~yA~i 212 (226)
T COG2129 143 LTHAPPYGTLLD--TPSG-YVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDK---IGN--TIVVNPGPLG--EGRYALI 212 (226)
T ss_pred EecCCCCCcccc--CCCC-ccccchHHHHHHHHHhCCceEEEeeecccccccc---cCC--eEEECCCCcc--CceEEEE
Confidence 111222111000 1222 1346999999999999999999999999999876 455 6777887543 3478899
Q ss_pred EEeCCCceEEEEe
Q 022085 271 SFNENMEREVKFF 283 (303)
Q Consensus 271 ~i~~~~~~~~~~~ 283 (303)
.++++ .++..+|
T Consensus 213 ~l~~~-~Vk~~~~ 224 (226)
T COG2129 213 ELEKE-VVKLEQF 224 (226)
T ss_pred EecCc-EEEEEEe
Confidence 99866 5565555
No 48
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=98.71 E-value=4.2e-07 Score=80.63 Aligned_cols=193 Identities=17% Similarity=0.176 Sum_probs=101.7
Q ss_pred CcceeecCCCCH----HHH----HHHHHhcCCCCCceEEEecCeecCCCCcH---HHHHHHHHhh-hhCCCeEEEEcCCc
Q 022085 44 PVTVCGDIHGQF----HDL----MKLFQTGGHVPETNYIFMGDFVDRGYNSL---EVFTILLLLK-ARYPANITLLRGNH 111 (303)
Q Consensus 44 ~i~viGDIHG~~----~~l----~~ll~~~~~~~~~~~vfLGD~VDRG~~s~---evl~~l~~lk-~~~P~~v~~lrGNH 111 (303)
+++++||+|--. ..+ ..+.+.+.....+.+|++||++|.+.... .....+..|+ ...| ++.++|||
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~~~p--~~~~~GNH 79 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDKAGIP--YSVLAGNH 79 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCCc--EEEECCCC
Confidence 578999999522 223 23344433344688999999999998433 2223333333 1233 88999999
Q ss_pred hhhhhhhccCChHHHHHHhCCchhhhhhhHHHhcccceeEEeceEEEEcCCCCCCCCCHHHHHhhhccccCCCCCCcccc
Q 022085 112 ESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDL 191 (303)
Q Consensus 112 E~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dl 191 (303)
|... ...+.. ...-+.-+.+.++..|- ...++++|-=+.+..... ...
T Consensus 80 D~~~-~ld~~~---------~~~ql~WL~~~L~~~~~----~~~iv~~H~p~~~~~~~~------------------~~~ 127 (214)
T cd07399 80 DLVL-ALEFGP---------RDEVLQWANEVLKKHPD----RPAILTTHAYLNCDDSRP------------------DSI 127 (214)
T ss_pred cchh-hCCCCC---------CHHHHHHHHHHHHHCCC----CCEEEEecccccCCCCcC------------------ccc
Confidence 9432 111111 11122223444444331 234788887433221100 001
Q ss_pred ccCCCCCCCCCccCCCCCceeeCcchhhhhhhhC-CceEEEecccccccceeEE----eCCCeEEEEEcCCCCCccCCCc
Q 022085 192 MWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHIN-NLDLVCRAHQLVQEGLKYM----FQDKGLVTVWSAPNYCYRCGNV 266 (303)
Q Consensus 192 lWsdp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~-~~~~iIrgH~~~~~G~~~~----~~~~~~itifSa~~y~~~~~N~ 266 (303)
.|.. ....+...+.+.++++ +++.++.||.... +.... ..++.+..+.+........+|-
T Consensus 128 ~~~~--------------~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~-~~~~~~~~~~~g~~v~~~~~~~q~~~~~g~~ 192 (214)
T cd07399 128 DYDS--------------DVNDGQQIWDKLVKKNDNVFMVLSGHVHGA-GRTTLVSVGDAGRTVHQMLADYQGEPNGGNG 192 (214)
T ss_pred cccc--------------ccccHHHHHHHHHhCCCCEEEEEccccCCC-ceEEEcccCCCCCEeeEEeecccCCCCCCcc
Confidence 1110 1123445677888887 8999999998763 33332 1134455554443222112221
Q ss_pred -EEEEEEeCC-CceEEEEeec
Q 022085 267 -ASILSFNEN-MEREVKFFTE 285 (303)
Q Consensus 267 -~avl~i~~~-~~~~~~~~~~ 285 (303)
=.++.++++ +++.+.+|.|
T Consensus 193 ~~r~~~f~~~~~~i~~~tysp 213 (214)
T cd07399 193 FLRLLEFDPDNNKIDVRTYSP 213 (214)
T ss_pred eEEEEEEecCCCEEEEEeCCC
Confidence 247777766 5788888876
No 49
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.63 E-value=2e-06 Score=73.82 Aligned_cols=160 Identities=19% Similarity=0.177 Sum_probs=99.2
Q ss_pred CCcceeecCCCCHHHHHHHHHhcCCCCCceEEEecCeecCCCCcHHHHHHHHHhhhhCCCeEEEEcCCchhhhhhhccCC
Q 022085 43 SPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGF 122 (303)
Q Consensus 43 ~~i~viGDIHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDRG~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~~~~~~~gf 122 (303)
|++.|++|.||...+..+..+.......+.+|.+||++..... .. +......+++.++||.|.....
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~~-----~~---l~~~~~~~i~~V~GN~D~~~~~----- 68 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFTL-----DA---LEGGLAAKLIAVRGNCDGEVDQ----- 68 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccch-----HH---hhcccccceEEEEccCCCcccc-----
Confidence 6899999999999766666666556677899999999876541 11 1111234699999999985432
Q ss_pred hHHHHHHhCCchhhhhhhHHHhcccceeE--E-eceEEEEcCCCCCCCCCHHHHHhhhccccCCCCCCccccccCCCCCC
Q 022085 123 YDECQRKYGNANAWRYCTDVFDYLTLSAI--I-DGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDI 199 (303)
Q Consensus 123 ~~e~~~~~~~~~~~~~~~~~f~~LP~~~~--i-~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~ 199 (303)
..+|-..+ + +-|++++||....-....
T Consensus 69 ---------------------~~~p~~~~~~~~g~ki~l~HGh~~~~~~~~----------------------------- 98 (172)
T COG0622 69 ---------------------EELPEELVLEVGGVKIFLTHGHLYFVKTDL----------------------------- 98 (172)
T ss_pred ---------------------ccCChhHeEEECCEEEEEECCCccccccCH-----------------------------
Confidence 22222222 2 468999999643211111
Q ss_pred CCCccCCCCCceeeCcchhhhhhhhCCceEEEecccccccceeEEeCCCeEEEEEcCCCCCcc--CCCcEEEEEEeC-CC
Q 022085 200 ETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYR--CGNVASILSFNE-NM 276 (303)
Q Consensus 200 ~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~~itifSa~~y~~~--~~N~~avl~i~~-~~ 276 (303)
..+..+-+..+.+.+|.||+..+.=.+. ++ +++-+|+=+.. +++..+++.++. +.
T Consensus 99 ----------------~~l~~la~~~~~Dvli~GHTH~p~~~~~---~~---i~~vNPGS~s~pr~~~~~sy~il~~~~~ 156 (172)
T COG0622 99 ----------------SLLEYLAKELGADVLIFGHTHKPVAEKV---GG---ILLVNPGSVSGPRGGNPASYAILDVDNL 156 (172)
T ss_pred ----------------HHHHHHHHhcCCCEEEECCCCcccEEEE---CC---EEEEcCCCcCCCCCCCCcEEEEEEcCCC
Confidence 2334445556789999999998654433 44 34556664432 234445666654 35
Q ss_pred ceEEEEeecCC
Q 022085 277 EREVKFFTETE 287 (303)
Q Consensus 277 ~~~~~~~~~~~ 287 (303)
++....++...
T Consensus 157 ~~~~~~~~~~~ 167 (172)
T COG0622 157 EVEVLFLERDR 167 (172)
T ss_pred EEEEEEeeccc
Confidence 67777666543
No 50
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.61 E-value=3.1e-07 Score=75.09 Aligned_cols=107 Identities=16% Similarity=0.089 Sum_probs=74.5
Q ss_pred ceeecCCCCHHHHHHHHHhcCCCCCceEEEecCeecCCCCcHHHHHHHHHhhhhCCCeEEEEcCCchhhhhhhccCChHH
Q 022085 46 TVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDE 125 (303)
Q Consensus 46 ~viGDIHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDRG~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~~~~~~~gf~~e 125 (303)
.||||.||..+.+.++... ..+.+.++++||+. .+++..+..++ ...++.++||||
T Consensus 1 ~viSDtH~~~~~~~~~~~~--~~~~d~ii~~GD~~------~~~~~~~~~~~---~~~~~~V~GN~D------------- 56 (129)
T cd07403 1 LVISDTESPALYSPEIKVR--LEGVDLILSAGDLP------KEYLEYLVTML---NVPVYYVHGNHD------------- 56 (129)
T ss_pred CeeccccCccccchHHHhh--CCCCCEEEECCCCC------hHHHHHHHHHc---CCCEEEEeCCCc-------------
Confidence 4899999998777776654 45678999999973 34556555542 123889999999
Q ss_pred HHHHhCCchhhhhhhHHHhcccceeEEeceEEEEcCCCCCCCCCHHHHHhhhccccCCCCCCccccccCCCCCCCCCccC
Q 022085 126 CQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVS 205 (303)
Q Consensus 126 ~~~~~~~~~~~~~~~~~f~~LP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~ 205 (303)
-+++++|+-+.+. ... .+.
T Consensus 57 ----------------------------~~Ilv~H~pp~~~-~~~------------------~~~-------------- 75 (129)
T cd07403 57 ----------------------------VDILLTHAPPAGI-GDG------------------EDF-------------- 75 (129)
T ss_pred ----------------------------cCEEEECCCCCcC-cCc------------------ccc--------------
Confidence 3689999832110 000 000
Q ss_pred CCCCceeeCcchhhhhhhhCCceEEEeccccccccee
Q 022085 206 PRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLK 242 (303)
Q Consensus 206 ~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~ 242 (303)
..-|.+.+.+++++.+.+.++.||...+..+.
T Consensus 76 -----~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 76 -----AHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred -----cccCHHHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence 11255677888888999999999999988776
No 51
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=98.60 E-value=5.1e-07 Score=74.39 Aligned_cols=118 Identities=20% Similarity=0.217 Sum_probs=75.8
Q ss_pred cceeecCCCCHH------H----HHHHHHhcCCCCCceEEEecCeecCCCCc--HHHHHHHHHhhhhCCCeEEEEcCCch
Q 022085 45 VTVCGDIHGQFH------D----LMKLFQTGGHVPETNYIFMGDFVDRGYNS--LEVFTILLLLKARYPANITLLRGNHE 112 (303)
Q Consensus 45 i~viGDIHG~~~------~----l~~ll~~~~~~~~~~~vfLGD~VDRG~~s--~evl~~l~~lk~~~P~~v~~lrGNHE 112 (303)
|+.++|+|=... . +.++++.....+.+.++++||+++.|... .+...++..++... ..++.++||||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNHD 79 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNHD 79 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCCe
Confidence 467899993221 1 22344444445678999999999998742 12334444444321 25999999999
Q ss_pred hhhhhhccCChHHHHHHhCCchhhhhhhHHHhcccceeEEeceEEEEcCCCCCCCCCHHHHHhhhccccCCCCCCccccc
Q 022085 113 SRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLM 192 (303)
Q Consensus 113 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dll 192 (303)
. ++++|..+.+....
T Consensus 80 ~------------------------------------------iv~~Hhp~~~~~~~----------------------- 94 (144)
T cd07400 80 V------------------------------------------IVVLHHPLVPPPGS----------------------- 94 (144)
T ss_pred E------------------------------------------EEEecCCCCCCCcc-----------------------
Confidence 7 78899865432111
Q ss_pred cCCCCCCCCCccCCCCCceeeCcchhhhhhhhCCceEEEecccccccceeE
Q 022085 193 WSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKY 243 (303)
Q Consensus 193 Wsdp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~ 243 (303)
|.+ .. . +.+.+.+++++.++++++.||...+..+.+
T Consensus 95 ~~~---------~~-----~-~~~~~~~~l~~~~~~~~l~GH~H~~~~~~~ 130 (144)
T cd07400 95 GRE---------RL-----L-DAGDALKLLAEAGVDLVLHGHKHVPYVGNI 130 (144)
T ss_pred ccc---------cC-----C-CHHHHHHHHHHcCCCEEEECCCCCcCeeec
Confidence 000 00 0 456688889999999999999998766654
No 52
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=98.37 E-value=5.7e-07 Score=79.44 Aligned_cols=71 Identities=23% Similarity=0.288 Sum_probs=53.5
Q ss_pred CCcceeecCCCCHH----HHHHHHHhcCCCCCceEEEecCeecCCCCcH-HHHHHHHHhhhhCCCeEEEEcCCchhhh
Q 022085 43 SPVTVCGDIHGQFH----DLMKLFQTGGHVPETNYIFMGDFVDRGYNSL-EVFTILLLLKARYPANITLLRGNHESRQ 115 (303)
Q Consensus 43 ~~i~viGDIHG~~~----~l~~ll~~~~~~~~~~~vfLGD~VDRG~~s~-evl~~l~~lk~~~P~~v~~lrGNHE~~~ 115 (303)
+++.+++|+|+... .+.++++.+.....+.+++.||++|.+.... ++..++..++... .++++.||||...
T Consensus 2 ~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~l~~l~~~~--~v~~v~GNHD~~~ 77 (223)
T cd07385 2 LRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVLELLLELLKKLKAPL--GVYAVLGNHDYYS 77 (223)
T ss_pred CEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhhHHHHHHHhccCCCC--CEEEECCCccccc
Confidence 67999999998743 6677777665555688999999999987765 5555555554333 4999999999854
No 53
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=98.36 E-value=3.5e-05 Score=70.01 Aligned_cols=63 Identities=13% Similarity=0.039 Sum_probs=37.7
Q ss_pred chhhhhhhhCCceEEEecccccccceeEEeCCCeEEEEEcCCCCCccCCCcE-EEEEEeCCCceEEEE
Q 022085 216 RVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVA-SILSFNENMEREVKF 282 (303)
Q Consensus 216 ~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~~itifSa~~y~~~~~N~~-avl~i~~~~~~~~~~ 282 (303)
..+.+.+++.+++.++.||........ + +|--..+-+++.+.....+.| .++.++++. +++..
T Consensus 196 ~~l~~ll~~~~V~~v~~GH~H~~~~~~--~-~g~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~ 259 (262)
T cd07395 196 KPLLDKFKKAGVKAVFSGHYHRNAGGR--Y-GGLEMVVTSAIGAQLGNDKSGLRIVKVTEDK-IVHEY 259 (262)
T ss_pred HHHHHHHHhcCceEEEECccccCCceE--E-CCEEEEEcCceecccCCCCCCcEEEEECCCc-eeeee
Confidence 457778888999999999999877643 3 443222223444333333444 377776543 34433
No 54
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.34 E-value=1.7e-05 Score=72.60 Aligned_cols=73 Identities=16% Similarity=0.242 Sum_probs=49.1
Q ss_pred CcceeecCC--C-----------CHHHHHHHHHhcCCCCCceEEEecCeecCCCC-cHHHHHHHHHhhhhCCCeEEEEcC
Q 022085 44 PVTVCGDIH--G-----------QFHDLMKLFQTGGHVPETNYIFMGDFVDRGYN-SLEVFTILLLLKARYPANITLLRG 109 (303)
Q Consensus 44 ~i~viGDIH--G-----------~~~~l~~ll~~~~~~~~~~~vfLGD~VDRG~~-s~evl~~l~~lk~~~P~~v~~lrG 109 (303)
++.+++|+| . ....+.++++.+.....+-+|++||+++.|.. +.+-+..+.+.-...+-.++.++|
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v~G 81 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHVLG 81 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEecC
Confidence 688999999 2 24566777777655557889999999998873 223333333322222234999999
Q ss_pred Cchhhhh
Q 022085 110 NHESRQL 116 (303)
Q Consensus 110 NHE~~~~ 116 (303)
|||....
T Consensus 82 NHD~~~~ 88 (267)
T cd07396 82 NHDLYNP 88 (267)
T ss_pred ccccccc
Confidence 9998643
No 55
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=98.32 E-value=1.1e-06 Score=80.67 Aligned_cols=70 Identities=19% Similarity=0.147 Sum_probs=53.4
Q ss_pred CCcceeecCCCC----HHHHHHHHHhcCCCCCceEEEecCeecCC--CCcHHHHHHHHHhhhhCCCeEEEEcCCchhh
Q 022085 43 SPVTVCGDIHGQ----FHDLMKLFQTGGHVPETNYIFMGDFVDRG--YNSLEVFTILLLLKARYPANITLLRGNHESR 114 (303)
Q Consensus 43 ~~i~viGDIHG~----~~~l~~ll~~~~~~~~~~~vfLGD~VDRG--~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~ 114 (303)
.+++.++|+|.. ...+.++++.+.....+.++++||++|++ ....++...+..|+...| ++.+.||||..
T Consensus 50 ~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~~~p--v~~V~GNHD~~ 125 (271)
T PRK11340 50 FKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFSDVLSPLAECAP--TFACFGNHDRP 125 (271)
T ss_pred cEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCccccHHHHHHHHHHHhhcCC--EEEecCCCCcc
Confidence 689999999976 55677777776656678999999999954 233456667777765555 99999999974
No 56
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=98.20 E-value=0.00017 Score=66.31 Aligned_cols=71 Identities=14% Similarity=0.094 Sum_probs=47.8
Q ss_pred CCCcceeecCC-C-----------CHHHHHHHHHhcCC--CCCceEEEecCeecCCCCcHHHHHHHHHhhhhCCCeEEEE
Q 022085 42 NSPVTVCGDIH-G-----------QFHDLMKLFQTGGH--VPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLL 107 (303)
Q Consensus 42 ~~~i~viGDIH-G-----------~~~~l~~ll~~~~~--~~~~~~vfLGD~VDRG~~s~evl~~l~~lk~~~P~~v~~l 107 (303)
..+++.|+|+| . ..+.+.++++.+.. ++.+-+|+.||++|.|. .+-+..+.+.-...+..++.+
T Consensus 14 ~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~--~~~~~~~~~~l~~l~~Pv~~v 91 (275)
T PRK11148 14 RVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS--SEAYQHFAEGIAPLRKPCVWL 91 (275)
T ss_pred CEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC--HHHHHHHHHHHhhcCCcEEEe
Confidence 46899999999 1 24567777776532 34588999999999874 233333332222233459999
Q ss_pred cCCchhh
Q 022085 108 RGNHESR 114 (303)
Q Consensus 108 rGNHE~~ 114 (303)
+||||..
T Consensus 92 ~GNHD~~ 98 (275)
T PRK11148 92 PGNHDFQ 98 (275)
T ss_pred CCCCCCh
Confidence 9999974
No 57
>PRK04036 DNA polymerase II small subunit; Validated
Probab=98.19 E-value=3.8e-05 Score=76.63 Aligned_cols=72 Identities=21% Similarity=0.268 Sum_probs=45.1
Q ss_pred CCCcceeecCC-CCH----HHHHHHHHhcC-C--------CCCceEEEecCeecC-CCCc---------------HHHHH
Q 022085 42 NSPVTVCGDIH-GQF----HDLMKLFQTGG-H--------VPETNYIFMGDFVDR-GYNS---------------LEVFT 91 (303)
Q Consensus 42 ~~~i~viGDIH-G~~----~~l~~ll~~~~-~--------~~~~~~vfLGD~VDR-G~~s---------------~evl~ 91 (303)
+..+++|+|+| |.. ..+..+++.+. . ...+.+|++||++|. |..+ .++..
T Consensus 243 ~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~ 322 (504)
T PRK04036 243 KVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAE 322 (504)
T ss_pred ccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHH
Confidence 46799999999 652 22344444332 2 224789999999995 3211 13445
Q ss_pred HHHHhhhhCCCeEEEEcCCchhhh
Q 022085 92 ILLLLKARYPANITLLRGNHESRQ 115 (303)
Q Consensus 92 ~l~~lk~~~P~~v~~lrGNHE~~~ 115 (303)
+|.++.... .+++++||||...
T Consensus 323 ~L~~L~~~i--~V~~ipGNHD~~~ 344 (504)
T PRK04036 323 YLKQIPEDI--KIIISPGNHDAVR 344 (504)
T ss_pred HHHhhhcCC--eEEEecCCCcchh
Confidence 555554332 5999999999764
No 58
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=98.11 E-value=0.00011 Score=65.45 Aligned_cols=67 Identities=25% Similarity=0.375 Sum_probs=45.7
Q ss_pred CcceeecCCCC------------HHHHHHHHHhcCCC--CCceEEEecCeecCCCCc-HH-HHHHHHHhhhhCCCeEEEE
Q 022085 44 PVTVCGDIHGQ------------FHDLMKLFQTGGHV--PETNYIFMGDFVDRGYNS-LE-VFTILLLLKARYPANITLL 107 (303)
Q Consensus 44 ~i~viGDIHG~------------~~~l~~ll~~~~~~--~~~~~vfLGD~VDRG~~s-~e-vl~~l~~lk~~~P~~v~~l 107 (303)
|+++++|+|=. ...+.++++.+... +.+-+|++||+++.|... .+ +...+..+ +-.++.+
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~~----~~p~~~v 76 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSPESYERLRELLAAL----PIPVYLL 76 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCHHHHHHHHHHHhhc----CCCEEEe
Confidence 57899999944 34567777765443 568899999999987532 12 33333332 3348999
Q ss_pred cCCchhh
Q 022085 108 RGNHESR 114 (303)
Q Consensus 108 rGNHE~~ 114 (303)
+||||..
T Consensus 77 ~GNHD~~ 83 (240)
T cd07402 77 PGNHDDR 83 (240)
T ss_pred CCCCCCH
Confidence 9999974
No 59
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=98.09 E-value=7.5e-05 Score=65.14 Aligned_cols=70 Identities=10% Similarity=0.023 Sum_probs=44.0
Q ss_pred CCcceeecCCCCHH------------HHHHHHHhcCCCCCceEEEecCeecCCCCc---HHHHHHHHHhhhhCCCeEEEE
Q 022085 43 SPVTVCGDIHGQFH------------DLMKLFQTGGHVPETNYIFMGDFVDRGYNS---LEVFTILLLLKARYPANITLL 107 (303)
Q Consensus 43 ~~i~viGDIHG~~~------------~l~~ll~~~~~~~~~~~vfLGD~VDRG~~s---~evl~~l~~lk~~~P~~v~~l 107 (303)
.++.+++|+|-... .+..+.+.+.....+.+|++||+++.+... .+.+..+++......-.++++
T Consensus 3 ~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~ 82 (199)
T cd07383 3 FKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAAT 82 (199)
T ss_pred eEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEEE
Confidence 47899999996222 122222223334568899999999977653 455555444333222348999
Q ss_pred cCCch
Q 022085 108 RGNHE 112 (303)
Q Consensus 108 rGNHE 112 (303)
.||||
T Consensus 83 ~GNHD 87 (199)
T cd07383 83 FGNHD 87 (199)
T ss_pred CccCC
Confidence 99999
No 60
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=98.05 E-value=8.9e-06 Score=73.15 Aligned_cols=68 Identities=22% Similarity=0.187 Sum_probs=49.1
Q ss_pred CcceeecCCCCH------HHHHHHHHhcCCCCCceEEEecCeecCCCCcHHHHHHHHHhhhhCCCeEEEEcCCchhh
Q 022085 44 PVTVCGDIHGQF------HDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESR 114 (303)
Q Consensus 44 ~i~viGDIHG~~------~~l~~ll~~~~~~~~~~~vfLGD~VDRG~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~ 114 (303)
++.+++|+|+++ ..+.++++.+...+.+.+|+.||++++.+.+.+.+..+.++ .+..+++++||||..
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNHD~~ 74 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNHDML 74 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCCCCC
Confidence 578999999753 23556666665556789999999999876666665555443 223499999999974
No 61
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.04 E-value=3.5e-05 Score=68.75 Aligned_cols=198 Identities=14% Similarity=0.123 Sum_probs=104.0
Q ss_pred ceeecCCCC------HHHHHHHHHhcCCCCCceEEEecCeecC--CCC-----cHHHHHHHHHhhhhCCCeEEEEcCCch
Q 022085 46 TVCGDIHGQ------FHDLMKLFQTGGHVPETNYIFMGDFVDR--GYN-----SLEVFTILLLLKARYPANITLLRGNHE 112 (303)
Q Consensus 46 ~viGDIHG~------~~~l~~ll~~~~~~~~~~~vfLGD~VDR--G~~-----s~evl~~l~~lk~~~P~~v~~lrGNHE 112 (303)
+.|+|+|=. .+.|.+.++... +..+.+.++||++|- |.+ -.+|...|..+.. ...+++.+.||||
T Consensus 1 lFISDlHL~~~~p~~t~~fl~Fl~~~a-~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a~-~G~~v~~i~GN~D 78 (237)
T COG2908 1 LFISDLHLGPKRPALTAFFLDFLREEA-AQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLAR-KGTRVYYIHGNHD 78 (237)
T ss_pred CeeeccccCCCCcHHHHHHHHHHHhcc-ccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHHh-cCCeEEEecCchH
Confidence 368999954 333455555432 255889999999852 222 1345555555443 3457999999999
Q ss_pred hhhhhhccCChHHHHHHhCCchhhhhhhHHHhcccceeEE---eceEEEEcCCCCCCCCCHHHHHhhhccccC-------
Q 022085 113 SRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAII---DGTVLCVHGGLSPDIRTIDQIRVIERNCEI------- 182 (303)
Q Consensus 113 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LP~~~~i---~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~------- 182 (303)
..+ ... .....|. +.-+|-..++ +.+++.+||-.--. .........+....
T Consensus 79 fll-~~~------f~~~~g~----------~~l~~~~~~~~l~g~~~Ll~HGD~f~t--~~~~y~~~r~~~~~~~~~~lf 139 (237)
T COG2908 79 FLL-GKR------FAQEAGG----------MTLLPDPIVLDLYGKRILLAHGDTFCT--DDRAYQWFRYKVHWAWLQLLF 139 (237)
T ss_pred HHH-HHH------HHhhcCc----------eEEcCcceeeeecCcEEEEEeCCcccc--hHHHHHHHHHHcccHHHHHHH
Confidence 543 211 1122221 2334444333 78999999954211 11111111110000
Q ss_pred ---CCC--CCccccccCCCCCCCCCccCCCCCc---eeeCcchhhhhhhhCCceEEEecccccccceeEEeCCCeEEEEE
Q 022085 183 ---PHE--GPFCDLMWSDPEDIETWAVSPRGAG---WLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVW 254 (303)
Q Consensus 183 ---~~~--~~~~dllWsdp~~~~~~~~~~rg~g---~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~~itif 254 (303)
|.. ..+..-+|+. ..|........ ....+.++.+-+++++++.+|.||+..+..... ++...-+-
T Consensus 140 lnl~l~~R~ri~~k~r~~----s~~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~~i---~~~~yi~l 212 (237)
T COG2908 140 LNLPLRVRRRIAYKIRSL----SSWAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIHNI---PGITYINL 212 (237)
T ss_pred HHhHHHHHHHHHHHHHHh----hHHhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhccC---CCceEEec
Confidence 000 0011224444 22322211111 124566777889999999999999998877655 34111111
Q ss_pred cCCCCCccCCCcEEEEEEeCCCc
Q 022085 255 SAPNYCYRCGNVASILSFNENME 277 (303)
Q Consensus 255 Sa~~y~~~~~N~~avl~i~~~~~ 277 (303)
.+ -...+|+++++++..
T Consensus 213 Gd------W~~~~s~~~v~~~~~ 229 (237)
T COG2908 213 GD------WVSEGSILEVDDGGL 229 (237)
T ss_pred Cc------chhcceEEEEecCcE
Confidence 11 114679999987654
No 62
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=98.03 E-value=1.2e-06 Score=84.70 Aligned_cols=243 Identities=12% Similarity=-0.003 Sum_probs=165.0
Q ss_pred CCCCHHHHHHHHHHHHHHHhhCCCccccC----CCcceeecCCCCHHHHHHHHHhcCCCC-CceEEEecCeecCCCCcHH
Q 022085 14 QHLLEDELQLLCEYVKEILIEESNVQPVN----SPVTVCGDIHGQFHDLMKLFQTGGHVP-ETNYIFMGDFVDRGYNSLE 88 (303)
Q Consensus 14 ~~~~~~~~~~l~~~~~~i~~~ep~ll~~~----~~i~viGDIHG~~~~l~~ll~~~~~~~-~~~~vfLGD~VDRG~~s~e 88 (303)
+.+...++..+++.+.++++.+|+...+. .-.+.++|.||.+.|+.++++.- |. ..-|++-|++++++....+
T Consensus 13 ~~l~~~~fd~avdlysKaI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie~d--P~~~K~Y~rrg~a~m~l~~~~~ 90 (476)
T KOG0376|consen 13 EALKDKVFDVAVDLYSKAIELDPNCAIYFANRALAHLKVESFGGALHDALKAIELD--PTYIKAYVRRGTAVMALGEFKK 90 (476)
T ss_pred hhcccchHHHHHHHHHHHHhcCCcceeeechhhhhheeechhhhHHHHHHhhhhcC--chhhheeeeccHHHHhHHHHHH
Confidence 34677888999999999999999876553 34889999999999999998863 32 3459999999999999999
Q ss_pred HHHHHHHhhhhCCCeEEEEcCCchhhhhhhccCChHHHHHHhCCch--hhhhhhHHHhccc-ceeEEeceEEEEcCCCCC
Q 022085 89 VFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNAN--AWRYCTDVFDYLT-LSAIIDGTVLCVHGGLSP 165 (303)
Q Consensus 89 vl~~l~~lk~~~P~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~--~~~~~~~~f~~LP-~~~~i~~~~l~vHgGi~p 165 (303)
.+..+...+...|+...+.|++||+..+...++|..+....++... +...+. +..++ ++..+.+.++=-| -+..
T Consensus 91 A~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~~d~~s~~~~~~~--~~~~~~i~~~y~g~~le~~-kvt~ 167 (476)
T KOG0376|consen 91 ALLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPEGDKKSVVEMKID--EEDMDLIESDYSGPVLEDH-KVTL 167 (476)
T ss_pred HHHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCccCCccccccccc--cccccccccccCCcccccc-hhhH
Confidence 9999999999999999999999999999888998877776664321 111111 11222 3434443332222 1100
Q ss_pred --------------C------CCCHHHHHhhhccccCCCC-CCccccccCCCCCCC-CCccCCCCCceeeCcchhhhhhh
Q 022085 166 --------------D------IRTIDQIRVIERNCEIPHE-GPFCDLMWSDPEDIE-TWAVSPRGAGWLFGSRVTSEFNH 223 (303)
Q Consensus 166 --------------~------~~~~~~i~~i~r~~~~~~~-~~~~dllWsdp~~~~-~~~~~~rg~g~~fg~~~~~~fl~ 223 (303)
. ..-+++...+.+....+-+ ..-.+..|+++.+.. .|....++.+...++..+..|+.
T Consensus 168 e~vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ylf 247 (476)
T KOG0376|consen 168 EFVKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPYLF 247 (476)
T ss_pred HHHHHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcccccc
Confidence 0 0011122222221111111 123577899988654 45566788888888999999999
Q ss_pred hCCceEEEeccccc------------ccceeEEe--CCCeEEEEEcCCCCCc
Q 022085 224 INNLDLVCRAHQLV------------QEGLKYMF--QDKGLVTVWSAPNYCY 261 (303)
Q Consensus 224 ~~~~~~iIrgH~~~------------~~G~~~~~--~~~~~itifSa~~y~~ 261 (303)
+.+.+-+.+.+.-+ ..+|..+. ..+.+.++|+++.++.
T Consensus 248 ngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~ 299 (476)
T KOG0376|consen 248 NGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVK 299 (476)
T ss_pred cCceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchh
Confidence 99888888887742 33443332 1245889999999873
No 63
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=97.97 E-value=1.7e-05 Score=72.29 Aligned_cols=73 Identities=22% Similarity=0.230 Sum_probs=50.3
Q ss_pred CCcceeecCCC-C-----------HHHHHHHHHhcCCCCCceEEEecCeecCCCCcHHHH----HHHHHhhhhCCCeEEE
Q 022085 43 SPVTVCGDIHG-Q-----------FHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVF----TILLLLKARYPANITL 106 (303)
Q Consensus 43 ~~i~viGDIHG-~-----------~~~l~~ll~~~~~~~~~~~vfLGD~VDRG~~s~evl----~~l~~lk~~~P~~v~~ 106 (303)
|+++.++|+|- . ...|.++++.+.....+.+++.||++|+...+.+.. .++..|+...|-.+++
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~ 80 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVV 80 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEE
Confidence 57899999993 2 234555555544455788999999999986665443 3444454433345999
Q ss_pred EcCCchhhh
Q 022085 107 LRGNHESRQ 115 (303)
Q Consensus 107 lrGNHE~~~ 115 (303)
+.||||...
T Consensus 81 i~GNHD~~~ 89 (253)
T TIGR00619 81 ISGNHDSAQ 89 (253)
T ss_pred EccCCCChh
Confidence 999999854
No 64
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=97.96 E-value=0.00027 Score=64.25 Aligned_cols=73 Identities=23% Similarity=0.313 Sum_probs=51.7
Q ss_pred CCcceeecCCCC------HHHHHHHHHhcCCCCCceEEEecCeecCCCCcHHHHHHHHHhhh--hCCCeEEEEcCCchhh
Q 022085 43 SPVTVCGDIHGQ------FHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKA--RYPANITLLRGNHESR 114 (303)
Q Consensus 43 ~~i~viGDIHG~------~~~l~~ll~~~~~~~~~~~vfLGD~VDRG~~s~evl~~l~~lk~--~~P~~v~~lrGNHE~~ 114 (303)
++++.|+|+|-. ...+.++++.+...+.|-+|+.||+.++|. .+-.+.+..+-. ..|..+++++||||.+
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~~--~~~~~~~~~~l~~~~~~~~~~~vpGNHD~~ 78 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDGE--PEEYRRLKELLARLELPAPVIVVPGNHDAR 78 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCCCC--HHHHHHHHHHHhhccCCCceEeeCCCCcCC
Confidence 468899999977 334556667777666699999999999963 233333333222 5566799999999998
Q ss_pred hhh
Q 022085 115 QLT 117 (303)
Q Consensus 115 ~~~ 117 (303)
..+
T Consensus 79 ~~~ 81 (301)
T COG1409 79 VVN 81 (301)
T ss_pred chH
Confidence 754
No 65
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.94 E-value=2.5e-05 Score=66.51 Aligned_cols=67 Identities=24% Similarity=0.337 Sum_probs=44.1
Q ss_pred cceeecCCCCHHHH---------------HHHHHhcC--CCCCceEEEecCeecCCCCcHHHHHHHHHhhhhCCCeEEEE
Q 022085 45 VTVCGDIHGQFHDL---------------MKLFQTGG--HVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLL 107 (303)
Q Consensus 45 i~viGDIHG~~~~l---------------~~ll~~~~--~~~~~~~vfLGD~VDRG~~s~evl~~l~~lk~~~P~~v~~l 107 (303)
+++|+|+|=..... .++++.+. ..+.+.++++||++++|..+.. +.++.++ +..++++
T Consensus 1 ~~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~~~-~~~l~~~----~~~~~~v 75 (168)
T cd07390 1 IYFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAGTE-LELLSRL----NGRKHLI 75 (168)
T ss_pred CeEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChHHH-HHHHHhC----CCCeEEE
Confidence 46888998655432 22333322 3356899999999999986644 4444433 2349999
Q ss_pred cCCchhhhh
Q 022085 108 RGNHESRQL 116 (303)
Q Consensus 108 rGNHE~~~~ 116 (303)
+||||....
T Consensus 76 ~GNHD~~~~ 84 (168)
T cd07390 76 KGNHDSSLE 84 (168)
T ss_pred eCCCCchhh
Confidence 999997653
No 66
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.82 E-value=3.7e-05 Score=73.01 Aligned_cols=73 Identities=19% Similarity=0.240 Sum_probs=49.0
Q ss_pred CCcceeecCC-C-----------CHHHHHHHHHhcCCCCCceEEEecCeecCC-CCcHHHHHHHHH--h--hhhCCCeEE
Q 022085 43 SPVTVCGDIH-G-----------QFHDLMKLFQTGGHVPETNYIFMGDFVDRG-YNSLEVFTILLL--L--KARYPANIT 105 (303)
Q Consensus 43 ~~i~viGDIH-G-----------~~~~l~~ll~~~~~~~~~~~vfLGD~VDRG-~~s~evl~~l~~--l--k~~~P~~v~ 105 (303)
|+++.++|+| | ....|.++++.+.....+.+++.||++|+. +.+.+++.++.. + -...+-.++
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~ 80 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITLH 80 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeEE
Confidence 6889999999 4 223455555555555668999999999985 455555544433 1 112234699
Q ss_pred EEcCCchhhh
Q 022085 106 LLRGNHESRQ 115 (303)
Q Consensus 106 ~lrGNHE~~~ 115 (303)
++.||||...
T Consensus 81 ~I~GNHD~~~ 90 (340)
T PHA02546 81 VLVGNHDMYY 90 (340)
T ss_pred EEccCCCccc
Confidence 9999999743
No 67
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=97.78 E-value=0.00019 Score=60.52 Aligned_cols=49 Identities=20% Similarity=0.250 Sum_probs=30.7
Q ss_pred CCCCceEEEecCeecCCCCcH-HHH-HHHHHhhhh---C-CCeEEEEcCCchhhh
Q 022085 67 HVPETNYIFMGDFVDRGYNSL-EVF-TILLLLKAR---Y-PANITLLRGNHESRQ 115 (303)
Q Consensus 67 ~~~~~~~vfLGD~VDRG~~s~-evl-~~l~~lk~~---~-P~~v~~lrGNHE~~~ 115 (303)
....+.+|++||++|.+..+. +.. ..+..++.. . +..+++++||||...
T Consensus 36 ~~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~~ 90 (156)
T cd08165 36 LLQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIGF 90 (156)
T ss_pred hcCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcCC
Confidence 345689999999999876432 221 222222222 1 235999999999743
No 68
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=97.78 E-value=0.00012 Score=64.33 Aligned_cols=29 Identities=10% Similarity=-0.025 Sum_probs=22.5
Q ss_pred CcchhhhhhhhCCceEEEeccccccccee
Q 022085 214 GSRVTSEFNHINNLDLVCRAHQLVQEGLK 242 (303)
Q Consensus 214 g~~~~~~fl~~~~~~~iIrgH~~~~~G~~ 242 (303)
....+.+.++..+.+.+|.||+..+.-..
T Consensus 177 ~~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 205 (217)
T cd07398 177 FEEAVARLARRKGVDGVICGHTHRPALHE 205 (217)
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCCCeEE
Confidence 44556777888999999999998865443
No 69
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.75 E-value=0.00039 Score=63.33 Aligned_cols=71 Identities=17% Similarity=0.079 Sum_probs=43.3
Q ss_pred cceeecCCCCHH------HH-HHHHHhcCCCCCceEEEecCeecCCCCc--------H---HHHHHHHHhhhhCCCeEEE
Q 022085 45 VTVCGDIHGQFH------DL-MKLFQTGGHVPETNYIFMGDFVDRGYNS--------L---EVFTILLLLKARYPANITL 106 (303)
Q Consensus 45 i~viGDIHG~~~------~l-~~ll~~~~~~~~~~~vfLGD~VDRG~~s--------~---evl~~l~~lk~~~P~~v~~ 106 (303)
++.++|+|-... .. ..+++.+.....+.+|++||++|++... . +.+..+..+....+..++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 467899995321 12 3344555455567899999999987531 1 2222222222223456899
Q ss_pred EcCCchhhh
Q 022085 107 LRGNHESRQ 115 (303)
Q Consensus 107 lrGNHE~~~ 115 (303)
++||||...
T Consensus 82 v~GNHD~~~ 90 (256)
T cd07401 82 IRGNHDLFN 90 (256)
T ss_pred eCCCCCcCC
Confidence 999999953
No 70
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=97.73 E-value=0.00055 Score=68.61 Aligned_cols=72 Identities=14% Similarity=0.164 Sum_probs=52.2
Q ss_pred CcchhhhhhhhCCce----EEEecccccc--cceeEEeCCCeEEEE---EcCCCCCccCCCcEEEEEEeCCCceEEEEee
Q 022085 214 GSRVTSEFNHINNLD----LVCRAHQLVQ--EGLKYMFQDKGLVTV---WSAPNYCYRCGNVASILSFNENMEREVKFFT 284 (303)
Q Consensus 214 g~~~~~~fl~~~~~~----~iIrgH~~~~--~G~~~~~~~~~~iti---fSa~~y~~~~~N~~avl~i~~~~~~~~~~~~ 284 (303)
.++..+..|+..|++ .||-||.||. +|-...-++||++.| ||.+ |.... .-|+.-.|..+-.++.++-+
T Consensus 507 ~e~~c~~IL~EFgl~~~~~hIINGHvPVk~k~GEsPIKa~Gkl~VIDGGfskA-Yqk~T-GIAGYTLiyNS~gl~L~~H~ 584 (640)
T PF06874_consen 507 DEEICDKILEEFGLDPERGHIINGHVPVKVKKGESPIKANGKLIVIDGGFSKA-YQKTT-GIAGYTLIYNSYGLQLVAHQ 584 (640)
T ss_pred CHHHHHHHHHHhCCCCCCCeEECCccccccCCCCCCccCCCEEEEEcChhhhh-hcccc-CccceEEEecCCcceeccCC
Confidence 345667788889998 9999999987 887776679999999 6665 33332 34566666666677777777
Q ss_pred cCC
Q 022085 285 ETE 287 (303)
Q Consensus 285 ~~~ 287 (303)
|..
T Consensus 585 pF~ 587 (640)
T PF06874_consen 585 PFE 587 (640)
T ss_pred CCC
Confidence 754
No 71
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.72 E-value=8.4e-05 Score=68.06 Aligned_cols=71 Identities=20% Similarity=0.342 Sum_probs=46.1
Q ss_pred cceeecCCCCHHHHHHHHHh---cCCCCCceEEEecCeecCCCCc-HHHH----------HHHHHh--hhhCCCeEEEEc
Q 022085 45 VTVCGDIHGQFHDLMKLFQT---GGHVPETNYIFMGDFVDRGYNS-LEVF----------TILLLL--KARYPANITLLR 108 (303)
Q Consensus 45 i~viGDIHG~~~~l~~ll~~---~~~~~~~~~vfLGD~VDRG~~s-~evl----------~~l~~l--k~~~P~~v~~lr 108 (303)
|+|+||+||+++.+.+.++. ....+.+-+|.+||+-..+..+ .+.+ ++..-+ ....|--++++.
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~ 80 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIG 80 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEEC
Confidence 68999999999988765443 2345678999999996544332 2222 111111 223455589999
Q ss_pred CCchhhh
Q 022085 109 GNHESRQ 115 (303)
Q Consensus 109 GNHE~~~ 115 (303)
||||...
T Consensus 81 GNHE~~~ 87 (262)
T cd00844 81 GNHEASN 87 (262)
T ss_pred CCCCCHH
Confidence 9999754
No 72
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=97.69 E-value=0.00017 Score=66.35 Aligned_cols=70 Identities=19% Similarity=0.148 Sum_probs=43.4
Q ss_pred CCcceeecCCC----CHHHHHHHHHhcCCCCCceEEEecCeecCCCCc-----HHHHHHHHHhhhhCCCeEEEEcCCchh
Q 022085 43 SPVTVCGDIHG----QFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNS-----LEVFTILLLLKARYPANITLLRGNHES 113 (303)
Q Consensus 43 ~~i~viGDIHG----~~~~l~~ll~~~~~~~~~~~vfLGD~VDRG~~s-----~evl~~l~~lk~~~P~~v~~lrGNHE~ 113 (303)
-+++++||.|. ....+.++.+. ....+-+|++||+++.+... -..+..+..+....| ++.++||||.
T Consensus 5 ~~f~v~gD~~~~~~~~~~~~~~l~~~--~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~P--~~~~~GNHD~ 80 (294)
T cd00839 5 FKFAVFGDMGQNTNNSTNTLDHLEKE--LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYVP--YMVTPGNHEA 80 (294)
T ss_pred EEEEEEEECCCCCCCcHHHHHHHHhc--cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcCC--cEEcCccccc
Confidence 47899999995 23333333332 24457899999999544332 222333333333455 8999999998
Q ss_pred hhh
Q 022085 114 RQL 116 (303)
Q Consensus 114 ~~~ 116 (303)
...
T Consensus 81 ~~~ 83 (294)
T cd00839 81 DYN 83 (294)
T ss_pred ccC
Confidence 643
No 73
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.67 E-value=7.6e-05 Score=65.52 Aligned_cols=73 Identities=19% Similarity=0.251 Sum_probs=48.8
Q ss_pred CcceeecCC-CCH--------------HHHHHHHHhcCCCCCceEEEecCeecCCCCcHHHHHHHHHhhhhC---CCeEE
Q 022085 44 PVTVCGDIH-GQF--------------HDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARY---PANIT 105 (303)
Q Consensus 44 ~i~viGDIH-G~~--------------~~l~~ll~~~~~~~~~~~vfLGD~VDRG~~s~evl~~l~~lk~~~---P~~v~ 105 (303)
+++.++|+| |.. ..|.++++.+.....+.+|+.||++|....+.+.+..+....... .-.++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVF 80 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 578999999 322 235666666555566789999999998876655444333322221 23599
Q ss_pred EEcCCchhhhh
Q 022085 106 LLRGNHESRQL 116 (303)
Q Consensus 106 ~lrGNHE~~~~ 116 (303)
++.||||....
T Consensus 81 ~~~GNHD~~~~ 91 (223)
T cd00840 81 IIAGNHDSPSR 91 (223)
T ss_pred EecCCCCCccc
Confidence 99999998654
No 74
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.60 E-value=0.00012 Score=71.07 Aligned_cols=72 Identities=25% Similarity=0.328 Sum_probs=47.5
Q ss_pred CCcceeecCC-CC-H------HH----HHHHHHhcCCCCCceEEEecCeecCCCCcHHHH----HHHHHhhhhCCCeEEE
Q 022085 43 SPVTVCGDIH-GQ-F------HD----LMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVF----TILLLLKARYPANITL 106 (303)
Q Consensus 43 ~~i~viGDIH-G~-~------~~----l~~ll~~~~~~~~~~~vfLGD~VDRG~~s~evl----~~l~~lk~~~P~~v~~ 106 (303)
|+++.++|+| |. + .+ +..+.+.+.....+.+|+.||++|++..+.+.. .++..|+.. +-.+++
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~-~~~v~~ 79 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQT-GCQLVV 79 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHhc-CCcEEE
Confidence 5789999999 32 1 11 334444444556789999999999986554432 333444432 235999
Q ss_pred EcCCchhhh
Q 022085 107 LRGNHESRQ 115 (303)
Q Consensus 107 lrGNHE~~~ 115 (303)
+.||||...
T Consensus 80 I~GNHD~~~ 88 (407)
T PRK10966 80 LAGNHDSVA 88 (407)
T ss_pred EcCCCCChh
Confidence 999999864
No 75
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=97.54 E-value=0.0002 Score=64.24 Aligned_cols=68 Identities=25% Similarity=0.267 Sum_probs=41.6
Q ss_pred cceeecCCCC---------H-----HHHHHHHHhcC--CCCCceEEEecCeecCCCCcHHHHHHHHHhhhhCCCeEEEEc
Q 022085 45 VTVCGDIHGQ---------F-----HDLMKLFQTGG--HVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLR 108 (303)
Q Consensus 45 i~viGDIHG~---------~-----~~l~~ll~~~~--~~~~~~~vfLGD~VDRG~~s~evl~~l~~lk~~~P~~v~~lr 108 (303)
|++++|||-. + +.+.++.+... .++.|-+|+.||++++++.. +....+..++.. |..++++.
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~~~-~~~~~l~~l~~l-~~~v~~V~ 78 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMKLE-EAKLDLAWIDAL-PGTKVLLK 78 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCChH-HHHHHHHHHHhC-CCCeEEEe
Confidence 5789999955 1 22333333322 23678899999999887633 333333233322 23489999
Q ss_pred CCchhh
Q 022085 109 GNHESR 114 (303)
Q Consensus 109 GNHE~~ 114 (303)
||||..
T Consensus 79 GNHD~~ 84 (232)
T cd07393 79 GNHDYW 84 (232)
T ss_pred CCcccc
Confidence 999973
No 76
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.53 E-value=0.00025 Score=63.53 Aligned_cols=69 Identities=17% Similarity=0.232 Sum_probs=44.3
Q ss_pred CCcceeecCC-CCHHH----------------HHHHHHhcCCCCCceEEEecCeecCCCCc---HHHHHHHHHhhhhCCC
Q 022085 43 SPVTVCGDIH-GQFHD----------------LMKLFQTGGHVPETNYIFMGDFVDRGYNS---LEVFTILLLLKARYPA 102 (303)
Q Consensus 43 ~~i~viGDIH-G~~~~----------------l~~ll~~~~~~~~~~~vfLGD~VDRG~~s---~evl~~l~~lk~~~P~ 102 (303)
.++.+|+|+| |--.. +.++.+.+.....+.+|++||+.+....+ .++.+++..+. .
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~~----~ 90 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVTF----R 90 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhcC----C
Confidence 6789999999 54332 22333333344568999999999765542 22333443332 3
Q ss_pred eEEEEcCCchhhh
Q 022085 103 NITLLRGNHESRQ 115 (303)
Q Consensus 103 ~v~~lrGNHE~~~ 115 (303)
.+++++||||...
T Consensus 91 ~v~~V~GNHD~~~ 103 (225)
T TIGR00024 91 DLILIRGNHDALI 103 (225)
T ss_pred cEEEECCCCCCcc
Confidence 5999999999754
No 77
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.45 E-value=0.00031 Score=60.03 Aligned_cols=57 Identities=23% Similarity=0.249 Sum_probs=34.5
Q ss_pred HHHHHHhcCCCCCceEEEecCeecCCCCcH--HHHHH-HHHhhhhCCCeEEEEcCCchhhh
Q 022085 58 LMKLFQTGGHVPETNYIFMGDFVDRGYNSL--EVFTI-LLLLKARYPANITLLRGNHESRQ 115 (303)
Q Consensus 58 l~~ll~~~~~~~~~~~vfLGD~VDRG~~s~--evl~~-l~~lk~~~P~~v~~lrGNHE~~~ 115 (303)
+.++.+.+...+.+.+|++||++|....+. +.... +..+ ...+-.+++++||||...
T Consensus 30 ~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~i~GNHD~~~ 89 (172)
T cd07391 30 LERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEVAFLRL-LAKDVDVILIRGNHDGGL 89 (172)
T ss_pred HHHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHHHHHHh-ccCCCeEEEEcccCccch
Confidence 344444444455689999999998754332 22211 1222 223346999999999854
No 78
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=97.37 E-value=0.00044 Score=67.13 Aligned_cols=55 Identities=15% Similarity=0.142 Sum_probs=43.9
Q ss_pred CCCcceeecCCCC------------HHHHHHHHHhcCCCCCceEEEecCeecCCCCcHHHHHHHHHh
Q 022085 42 NSPVTVCGDIHGQ------------FHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLL 96 (303)
Q Consensus 42 ~~~i~viGDIHG~------------~~~l~~ll~~~~~~~~~~~vfLGD~VDRG~~s~evl~~l~~l 96 (303)
.++|..++|+|-- +..|.++++.+.....|-+|+.||+.|++.-|.+++..++.+
T Consensus 3 ~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~ 69 (405)
T TIGR00583 3 TIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLRS 69 (405)
T ss_pred ceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHH
Confidence 4789999999942 456778888776667799999999999999998887655443
No 79
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=97.24 E-value=0.00048 Score=62.10 Aligned_cols=68 Identities=22% Similarity=0.249 Sum_probs=39.8
Q ss_pred ceeecCC--CCH---HHHHHHHHhc-CCC----CCceEEEecCeecCCCC------------c----HHHHHHHHHhhhh
Q 022085 46 TVCGDIH--GQF---HDLMKLFQTG-GHV----PETNYIFMGDFVDRGYN------------S----LEVFTILLLLKAR 99 (303)
Q Consensus 46 ~viGDIH--G~~---~~l~~ll~~~-~~~----~~~~~vfLGD~VDRG~~------------s----~evl~~l~~lk~~ 99 (303)
++|+|+| +.. ..+..+++.+ +.. ..+.+|++||++|+... . .++..++.+|...
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~ 81 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPSH 81 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcccC
Confidence 5799999 432 2223333332 221 23889999999997310 0 1233344444322
Q ss_pred CCCeEEEEcCCchhhh
Q 022085 100 YPANITLLRGNHESRQ 115 (303)
Q Consensus 100 ~P~~v~~lrGNHE~~~ 115 (303)
-.|+++.||||...
T Consensus 82 --~~v~~ipGNHD~~~ 95 (243)
T cd07386 82 --IKIIIIPGNHDAVR 95 (243)
T ss_pred --CeEEEeCCCCCccc
Confidence 35999999999853
No 80
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=97.17 E-value=0.00078 Score=62.41 Aligned_cols=71 Identities=20% Similarity=0.212 Sum_probs=50.7
Q ss_pred CCcceeecCCCCHHH--HHHHHHhcCCCCCceEEEecCeecC-C-CCcHHHHHHHHHhhhhCCCeEEEEcCCchhhh
Q 022085 43 SPVTVCGDIHGQFHD--LMKLFQTGGHVPETNYIFMGDFVDR-G-YNSLEVFTILLLLKARYPANITLLRGNHESRQ 115 (303)
Q Consensus 43 ~~i~viGDIHG~~~~--l~~ll~~~~~~~~~~~vfLGD~VDR-G-~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~~ 115 (303)
.+|+-++|+|-.... ..+.+........|-+++.|||+|+ . +....+...+..|+..+ .++.+.||||...
T Consensus 45 ~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~~~~~~~~~~~L~~L~~~~--gv~av~GNHd~~~ 119 (284)
T COG1408 45 LKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDRPPGVAALALFLAKLKAPL--GVFAVLGNHDYGV 119 (284)
T ss_pred eEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCCCCCHHHHHHHHHhhhccC--CEEEEeccccccc
Confidence 469999999988665 2233333333334999999999995 4 44455677777777655 4999999998764
No 81
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=96.93 E-value=0.002 Score=55.22 Aligned_cols=50 Identities=18% Similarity=0.202 Sum_probs=32.1
Q ss_pred CCCCCceEEEecCeecCCCCcH--H---HHHHHHHhhhhC-----CCeEEEEcCCchhhh
Q 022085 66 GHVPETNYIFMGDFVDRGYNSL--E---VFTILLLLKARY-----PANITLLRGNHESRQ 115 (303)
Q Consensus 66 ~~~~~~~~vfLGD~VDRG~~s~--e---vl~~l~~lk~~~-----P~~v~~lrGNHE~~~ 115 (303)
.....+.+|++||++|.+.... + .+..+.++.... ...++.++||||...
T Consensus 42 ~~~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 42 QRLKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred HhcCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 4455689999999999987432 2 232232321111 335999999999864
No 82
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=96.85 E-value=0.0021 Score=56.25 Aligned_cols=48 Identities=23% Similarity=0.400 Sum_probs=35.2
Q ss_pred CCCCceEEEecCeecCCCCc--HHHHHHHHHhhhhCC----CeEEEEcCCchhh
Q 022085 67 HVPETNYIFMGDFVDRGYNS--LEVFTILLLLKARYP----ANITLLRGNHESR 114 (303)
Q Consensus 67 ~~~~~~~vfLGD~VDRG~~s--~evl~~l~~lk~~~P----~~v~~lrGNHE~~ 114 (303)
....+-++||||++|.|+.+ .+..+.+..++..++ ..++.+.||||--
T Consensus 40 ~l~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 40 FVQPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred ccCCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 34568899999999999964 336666666654432 2688999999974
No 83
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=96.66 E-value=0.003 Score=56.92 Aligned_cols=66 Identities=24% Similarity=0.280 Sum_probs=44.2
Q ss_pred CcceeecCCCCH---------HHHHHHHHhcCC-CCCceEEEecCeecCCCCcH-----HHHHHHHHhhhhCCCeEEEEc
Q 022085 44 PVTVCGDIHGQF---------HDLMKLFQTGGH-VPETNYIFMGDFVDRGYNSL-----EVFTILLLLKARYPANITLLR 108 (303)
Q Consensus 44 ~i~viGDIHG~~---------~~l~~ll~~~~~-~~~~~~vfLGD~VDRG~~s~-----evl~~l~~lk~~~P~~v~~lr 108 (303)
+++.++|+||.+ ..+.+++++... .+...++..||+++.++.+. .++..+.++. + .+ +..
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~g---~-d~-~~~ 76 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNALG---Y-DA-VTI 76 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhcC---C-CE-Eee
Confidence 578999999887 456666666543 34456788999999887653 4555554433 2 23 456
Q ss_pred CCchhh
Q 022085 109 GNHESR 114 (303)
Q Consensus 109 GNHE~~ 114 (303)
||||..
T Consensus 77 GNHe~d 82 (252)
T cd00845 77 GNHEFD 82 (252)
T ss_pred cccccc
Confidence 999963
No 84
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=96.61 E-value=0.0056 Score=51.38 Aligned_cols=119 Identities=18% Similarity=0.231 Sum_probs=79.0
Q ss_pred ceeecCCCCHHHHHHHHHhcC--CCCCceEEEecCeecCCCCcHHHHHHHHHhhhhCCCeEEEEcCCchhhhhhhccCCh
Q 022085 46 TVCGDIHGQFHDLMKLFQTGG--HVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFY 123 (303)
Q Consensus 46 ~viGDIHG~~~~l~~ll~~~~--~~~~~~~vfLGD~VDRG~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~~~~~~~gf~ 123 (303)
.|+||+||+++.+.+-++.+. ..+-+-++++||+..-...+-+ +.-.+.=....|--.+++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~-~~~y~~g~~~~pipTyf~ggn~~----------- 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEE-LEAYKDGSKKVPIPTYFLGGNNP----------- 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccchhh-HHHHhcCCccCCCCEEEECCCCC-----------
Confidence 489999999999987776642 2345889999999876655533 33333334456667999999998
Q ss_pred HHHHHHhCCchhhhhhhHHHhcccceeEEeceEEEEcCCCCCCCCCHHHHHhhhccccCCCCCCccccccCCCCCCCCCc
Q 022085 124 DECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWA 203 (303)
Q Consensus 124 ~e~~~~~~~~~~~~~~~~~f~~LP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~ 203 (303)
+-.+|++|.=+ ..+...++. +.+
T Consensus 69 -----------------------------~~DILlTh~wP-~gi~~~~~~-------------------~~~-------- 91 (150)
T cd07380 69 -----------------------------GVDILLTSEWP-KGISKLSKV-------------------PFE-------- 91 (150)
T ss_pred -----------------------------CCCEEECCCCc-hhhhhhCCC-------------------ccc--------
Confidence 44689999732 111111100 000
Q ss_pred cCCCCCceeeCcchhhhhhhhCCceEEEeccccc
Q 022085 204 VSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLV 237 (303)
Q Consensus 204 ~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~ 237 (303)
..+..-|...+++++++..=++.+.||..+
T Consensus 92 ----~~~~~~GS~~i~~l~~~lkPrYhf~gh~~~ 121 (150)
T cd07380 92 ----ETLLICGSDLIAELAKKLKPRYHFAGLEGV 121 (150)
T ss_pred ----ccccCCCCHHHHHHHHHcCCCeEeecCCCc
Confidence 012235888999999999999999999754
No 85
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=96.56 E-value=0.0019 Score=57.50 Aligned_cols=208 Identities=14% Similarity=0.156 Sum_probs=93.2
Q ss_pred CCCcceeecCCCCHHHHHHHHHhcCCCCCceEEEecCeecCCCCcHHHH--------------------------HHHHH
Q 022085 42 NSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVF--------------------------TILLL 95 (303)
Q Consensus 42 ~~~i~viGDIHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDRG~~s~evl--------------------------~~l~~ 95 (303)
..++.+++|.||+++.+.++.+.+.....|-++|+||++-....+.|-. .++..
T Consensus 5 ~~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~ 84 (255)
T PF14582_consen 5 VRKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRI 84 (255)
T ss_dssp --EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHH
T ss_pred chhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHH
Confidence 3578999999999999999998877677899999999986655444333 33333
Q ss_pred hhhhCCCeEEEEcCCchhhhhhhccCChHHHHHHhCCchhhhhh---hHHHhcccc-eeEEe-ceEEEEcCCCC---CCC
Q 022085 96 LKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYC---TDVFDYLTL-SAIID-GTVLCVHGGLS---PDI 167 (303)
Q Consensus 96 lk~~~P~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~---~~~f~~LP~-~~~i~-~~~l~vHgGi~---p~~ 167 (303)
|. ..+--+++++||||....- |..+. |....+...+ .+.|...+- ..+++ +.-+..++-.. -.+
T Consensus 85 L~-~~~~p~~~vPG~~Dap~~~----~lr~a---~~~e~v~p~~~~vH~sf~~~~g~y~v~G~GGeI~~~~~~~~~~LrY 156 (255)
T PF14582_consen 85 LG-ELGVPVFVVPGNMDAPERF----FLREA---YNAEIVTPHIHNVHESFFFWKGEYLVAGMGGEITDDQREEEFKLRY 156 (255)
T ss_dssp HH-CC-SEEEEE--TTS-SHHH----HHHHH---HHCCCC-TTEEE-CTCEEEETTTEEEEEE-SEEESSS-BCSSS-EE
T ss_pred HH-hcCCcEEEecCCCCchHHH----HHHHH---hccceeccceeeeeeeecccCCcEEEEecCccccCCCccccccccc
Confidence 33 3334599999999996531 11221 2111111111 111222221 10110 00111111111 001
Q ss_pred CCHHHHHhhhccccCCCCCCccccccCCCCCCCCCccCCCCCc-eeeCcchhhhhhhhCCceEEEecccccccceeEEeC
Q 022085 168 RTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAG-WLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQ 246 (303)
Q Consensus 168 ~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~g-~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~ 246 (303)
+.|+..-.++...+.-+... --++..-|. -+.+ ..-|+.++..+.++.+=...++||-....|-+. .
T Consensus 157 P~weaey~lk~l~elk~~r~-IlLfhtpPd---------~~kg~~h~GS~~V~dlIk~~~P~ivl~Ghihe~~~~e~-l- 224 (255)
T PF14582_consen 157 PAWEAEYSLKFLRELKDYRK-ILLFHTPPD---------LHKGLIHVGSAAVRDLIKTYNPDIVLCGHIHESHGKES-L- 224 (255)
T ss_dssp EHHHHHHHHGGGGGCTSSEE-EEEESS-BT---------BCTCTBTTSBHHHHHHHHHH--SEEEE-SSS-EE--EE-E-
T ss_pred hHHHHHHHHHHHHhcccccE-EEEEecCCc---------cCCCcccccHHHHHHHHHhcCCcEEEecccccchhhHH-h-
Confidence 22322222222222111100 011222220 1112 346899999999999999999999988877766 3
Q ss_pred CCeEEEEEcCCCCCccCCCcEEEEEEeC
Q 022085 247 DKGLVTVWSAPNYCYRCGNVASILSFNE 274 (303)
Q Consensus 247 ~~~~itifSa~~y~~~~~N~~avl~i~~ 274 (303)
|+.+-| +|+=... ...|++.+..
T Consensus 225 -G~TlVV--NPGsL~~--G~yAvI~l~~ 247 (255)
T PF14582_consen 225 -GKTLVV--NPGSLAE--GDYAVIDLEQ 247 (255)
T ss_dssp -TTEEEE--E--BGGG--TEEEEEETTT
T ss_pred -CCEEEe--cCccccc--CceeEEEecc
Confidence 554444 4543322 2568887764
No 86
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=96.29 E-value=0.01 Score=57.28 Aligned_cols=74 Identities=18% Similarity=0.219 Sum_probs=52.2
Q ss_pred CCcceeecCCCC-------------HHHHHHHHHhcCCCCCceEEEecCeecCCCCcHHHHHHHHHhhhhCC---CeEEE
Q 022085 43 SPVTVCGDIHGQ-------------FHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYP---ANITL 106 (303)
Q Consensus 43 ~~i~viGDIHG~-------------~~~l~~ll~~~~~~~~~~~vfLGD~VDRG~~s~evl~~l~~lk~~~P---~~v~~ 106 (303)
||+..++|.|=- +.+|..+++.+....-|-+|.-||+.|++.-|.+++..+...-...- -.|++
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~ 80 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVV 80 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEE
Confidence 578888999944 33455555555555568899999999999888887666554322211 14999
Q ss_pred EcCCchhhhh
Q 022085 107 LRGNHESRQL 116 (303)
Q Consensus 107 lrGNHE~~~~ 116 (303)
|.||||...-
T Consensus 81 I~GNHD~~~~ 90 (390)
T COG0420 81 IAGNHDSPSR 90 (390)
T ss_pred ecCCCCchhc
Confidence 9999999764
No 87
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=96.28 E-value=0.011 Score=52.98 Aligned_cols=73 Identities=23% Similarity=0.304 Sum_probs=45.9
Q ss_pred cCCCcceeecCCCCHHHH----------------HHHHH-hcCCCCCceEEEecCeecCCCC-----cHHHHHHHHHhhh
Q 022085 41 VNSPVTVCGDIHGQFHDL----------------MKLFQ-TGGHVPETNYIFMGDFVDRGYN-----SLEVFTILLLLKA 98 (303)
Q Consensus 41 ~~~~i~viGDIHG~~~~l----------------~~ll~-~~~~~~~~~~vfLGD~VDRG~~-----s~evl~~l~~lk~ 98 (303)
...+..||+|+|=-+... .+.+. .+.....+++|.+||.-.-.+. ..++-.++..+..
T Consensus 18 ~~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~ 97 (235)
T COG1407 18 PLGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDE 97 (235)
T ss_pred ccCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhcc
Confidence 357899999999654332 23332 2223456889999999754433 2344444444443
Q ss_pred hCCCeEEEEcCCchhhhh
Q 022085 99 RYPANITLLRGNHESRQL 116 (303)
Q Consensus 99 ~~P~~v~~lrGNHE~~~~ 116 (303)
. .+++++||||...-
T Consensus 98 ~---evi~i~GNHD~~i~ 112 (235)
T COG1407 98 R---EVIIIRGNHDNGIE 112 (235)
T ss_pred C---cEEEEeccCCCccc
Confidence 2 49999999998653
No 88
>PLN02533 probable purple acid phosphatase
Probab=96.15 E-value=0.0066 Score=59.48 Aligned_cols=71 Identities=17% Similarity=0.200 Sum_probs=43.4
Q ss_pred CCCcceeecCCCCHHHHHHHHHhcCCCCCceEEEecCeecCCCCcH---HHHHHHHHhhhhCCCeEEEEcCCchhhh
Q 022085 42 NSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSL---EVFTILLLLKARYPANITLLRGNHESRQ 115 (303)
Q Consensus 42 ~~~i~viGDIHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDRG~~s~---evl~~l~~lk~~~P~~v~~lrGNHE~~~ 115 (303)
+-+++++||+|-. ......++.+.....+-++++||+++-+.... +-..++..+....| ++.+.||||...
T Consensus 139 ~~~f~v~GDlG~~-~~~~~tl~~i~~~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P--~m~~~GNHE~~~ 212 (427)
T PLN02533 139 PIKFAVSGDLGTS-EWTKSTLEHVSKWDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQRP--WMVTHGNHELEK 212 (427)
T ss_pred CeEEEEEEeCCCC-cccHHHHHHHHhcCCCEEEEcCccccccchHHHHHHHHHHhhhHhhcCc--eEEeCccccccc
Confidence 4579999999632 22223444443445678999999997543321 12233333333455 889999999864
No 89
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=96.08 E-value=0.016 Score=48.63 Aligned_cols=45 Identities=22% Similarity=0.254 Sum_probs=32.1
Q ss_pred CCCCceEEEecCeecCCCCcHHHHHHHHHhhhhCCCeEEEEcCCchhhh
Q 022085 67 HVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQ 115 (303)
Q Consensus 67 ~~~~~~~vfLGD~VDRG~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~~ 115 (303)
..|+|.+.+|||+.-.-....+...++.+| |.++++++||||.--
T Consensus 43 v~p~D~lwhLGDl~~~~n~~~~a~~IlerL----nGrkhlv~GNhDk~~ 87 (186)
T COG4186 43 VGPDDVLWHLGDLSSGANRERAAGLILERL----NGRKHLVPGNHDKCH 87 (186)
T ss_pred CCccceEEEecccccccchhhHHHHHHHHc----CCcEEEeeCCCCCCc
Confidence 457899999999986554444444444433 567899999999754
No 90
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=96.03 E-value=0.0085 Score=54.97 Aligned_cols=65 Identities=17% Similarity=0.227 Sum_probs=39.4
Q ss_pred CcceeecCCCCH----------------HHHHHHHHhcCCCCCceEEE-ecCeecCCCCc-----------HHHHHHHHH
Q 022085 44 PVTVCGDIHGQF----------------HDLMKLFQTGGHVPETNYIF-MGDFVDRGYNS-----------LEVFTILLL 95 (303)
Q Consensus 44 ~i~viGDIHG~~----------------~~l~~ll~~~~~~~~~~~vf-LGD~VDRG~~s-----------~evl~~l~~ 95 (303)
+|+.++|+||.+ ..+..+++.......+.+++ .||+++..+.+ ..++..+-.
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln~ 81 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMNA 81 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHHh
Confidence 478899999986 33555665544333344444 89999876522 234555544
Q ss_pred hhhhCCCeEEEEcCCchh
Q 022085 96 LKARYPANITLLRGNHES 113 (303)
Q Consensus 96 lk~~~P~~v~~lrGNHE~ 113 (303)
+. ++ ++..||||.
T Consensus 82 ~g---~d--~~~lGNHe~ 94 (277)
T cd07410 82 LG---YD--AGTLGNHEF 94 (277)
T ss_pred cC---CC--EEeecccCc
Confidence 43 22 455699995
No 91
>PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases.; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D ....
Probab=96.03 E-value=0.011 Score=45.72 Aligned_cols=39 Identities=13% Similarity=0.127 Sum_probs=32.2
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCcccc
Q 022085 3 LDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPV 41 (303)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~ep~ll~~ 41 (303)
++.|+++++++..++...+.+|+.++.++|+++|+++++
T Consensus 57 v~~mie~FK~~K~Lhkkyv~~Il~~~~~llk~~PslVeI 95 (95)
T PF08321_consen 57 VKAMIEWFKNQKKLHKKYVYQILLEAKKLLKQLPSLVEI 95 (95)
T ss_dssp HHHHHHHHHCT----HHHHHHHHHHHHHHHHTS-SEEEE
T ss_pred HHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhCcCccCC
Confidence 678999999999999999999999999999999999875
No 92
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.90 E-value=0.094 Score=43.74 Aligned_cols=127 Identities=20% Similarity=0.335 Sum_probs=83.1
Q ss_pred cceeecCCC--CHHHHHHHHHhcCCCCC-ceEEEecCeecCCCCcHHHHHHHHHhhhhCCCeEEEEcCCchhhhhhhccC
Q 022085 45 VTVCGDIHG--QFHDLMKLFQTGGHVPE-TNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYG 121 (303)
Q Consensus 45 i~viGDIHG--~~~~l~~ll~~~~~~~~-~~~vfLGD~VDRG~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~~~~~~~g 121 (303)
+.++||+|= ...+|-.-|++.=.|.+ ..++.+|++. |.|++++|..+. +.++++||--|.-
T Consensus 3 vL~lgD~HiP~Ra~~Lp~KFkklLvPgki~hilctGNlc-----s~e~~dylk~l~----~dvhiVrGeFD~~------- 66 (183)
T KOG3325|consen 3 VLVLGDLHIPHRANDLPAKFKKLLVPGKIQHILCTGNLC-----SKESYDYLKTLS----SDVHIVRGEFDEN------- 66 (183)
T ss_pred EEEeccccCCccccccCHHHHhccCCCceeEEEEeCCcc-----hHHHHHHHHhhC----CCcEEEecccCcc-------
Confidence 578999994 34455555555545554 7799999964 579999987765 3599999975542
Q ss_pred ChHHHHHHhCCchhhhhhhHHHhcccceeEE--e-ceEEEEcCCCCCCCCCHHHHHhhhccccCCCCCCccccccCCCCC
Q 022085 122 FYDECQRKYGNANAWRYCTDVFDYLTLSAII--D-GTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPED 198 (303)
Q Consensus 122 f~~e~~~~~~~~~~~~~~~~~f~~LP~~~~i--~-~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~ 198 (303)
.+| |..-++ + =|+-|+||-. -+=|.||
T Consensus 67 ------~~y----------------P~~kvvtvGqfkIG~chGhq--------------------------ViP~gd~-- 96 (183)
T KOG3325|consen 67 ------LKY----------------PENKVVTVGQFKIGLCHGHQ--------------------------VIPWGDP-- 96 (183)
T ss_pred ------ccC----------------CccceEEeccEEEEeecCcE--------------------------eecCCCH--
Confidence 122 333222 1 2688999832 1235553
Q ss_pred CCCCccCCCCCceeeCcchhhhhhhhCCceEEEecccccccceeEEeCCCeEEEEEcCCCCC
Q 022085 199 IETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYC 260 (303)
Q Consensus 199 ~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~~itifSa~~y~ 260 (303)
+++.-.-+..+++.++-||+...+.|+. +|+ .|..|+-+
T Consensus 97 -----------------~sL~~LaRqldvDILl~G~Th~f~Aye~---eg~---ffvnPGSa 135 (183)
T KOG3325|consen 97 -----------------ESLALLARQLDVDILLTGHTHKFEAYEH---EGK---FFVNPGSA 135 (183)
T ss_pred -----------------HHHHHHHHhcCCcEEEeCCceeEEEEEe---CCc---EEeCCCcc
Confidence 3444555568899999999999888866 676 45555533
No 93
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=95.66 E-value=0.025 Score=49.44 Aligned_cols=64 Identities=16% Similarity=0.209 Sum_probs=40.7
Q ss_pred cCCCCHHHHHHHHHhcC-CCCCceEEEecCeecCCCCcHH-HHHHHHHhhhhC---------------------CCeEEE
Q 022085 50 DIHGQFHDLMKLFQTGG-HVPETNYIFMGDFVDRGYNSLE-VFTILLLLKARY---------------------PANITL 106 (303)
Q Consensus 50 DIHG~~~~l~~ll~~~~-~~~~~~~vfLGD~VDRG~~s~e-vl~~l~~lk~~~---------------------P~~v~~ 106 (303)
|++|+=.=|.+.++.+. ....+.++||||++|.|--+-+ -.......+..+ ...++.
T Consensus 24 d~~~~D~YL~~~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~ 103 (193)
T cd08164 24 DLFGNDYFLGHIVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLIN 103 (193)
T ss_pred hhhhhHHHHHHHHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEE
Confidence 55666555666766543 3456889999999999854322 223333433332 135789
Q ss_pred EcCCchh
Q 022085 107 LRGNHES 113 (303)
Q Consensus 107 lrGNHE~ 113 (303)
|+||||-
T Consensus 104 V~GNHDI 110 (193)
T cd08164 104 IAGNHDV 110 (193)
T ss_pred ECCcccC
Confidence 9999998
No 94
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=95.42 E-value=0.023 Score=51.84 Aligned_cols=24 Identities=0% Similarity=-0.054 Sum_probs=21.2
Q ss_pred eCcchhhhhhhhCCceEEEecccc
Q 022085 213 FGSRVTSEFNHINNLDLVCRAHQL 236 (303)
Q Consensus 213 fg~~~~~~fl~~~~~~~iIrgH~~ 236 (303)
-.++.++..|++.+-.+|.-||+.
T Consensus 203 l~~~~s~~il~~~~P~~vfsGhdH 226 (257)
T cd08163 203 LEPSLSEVILKAVQPVIAFSGDDH 226 (257)
T ss_pred cCHHHHHHHHHhhCCcEEEecCCC
Confidence 467888899999999999999985
No 95
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=95.33 E-value=0.035 Score=50.58 Aligned_cols=69 Identities=20% Similarity=0.257 Sum_probs=39.9
Q ss_pred CcceeecCCCC--H--HHHHHHH-HhcCCCCCceEEEecCee-cCCCCcH------HHHHHHHH-hhhhCCCeEEEEcCC
Q 022085 44 PVTVCGDIHGQ--F--HDLMKLF-QTGGHVPETNYIFMGDFV-DRGYNSL------EVFTILLL-LKARYPANITLLRGN 110 (303)
Q Consensus 44 ~i~viGDIHG~--~--~~l~~ll-~~~~~~~~~~~vfLGD~V-DRG~~s~------evl~~l~~-lk~~~P~~v~~lrGN 110 (303)
+++++||.=.. . ..+.+.+ +.+...+.+-+|++||++ +-|..+. +.+..++. +.... .++.+.||
T Consensus 2 ~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~~--P~~~v~GN 79 (277)
T cd07378 2 RFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQV--PWYLVLGN 79 (277)
T ss_pred eEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhcC--CeEEecCC
Confidence 57899998663 1 2333333 333334567899999987 5554221 22222222 22223 39999999
Q ss_pred chhh
Q 022085 111 HESR 114 (303)
Q Consensus 111 HE~~ 114 (303)
||..
T Consensus 80 HD~~ 83 (277)
T cd07378 80 HDYS 83 (277)
T ss_pred cccC
Confidence 9986
No 96
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=95.26 E-value=0.87 Score=41.62 Aligned_cols=52 Identities=17% Similarity=0.184 Sum_probs=33.0
Q ss_pred ceEEEecccccccceeEEe-CCCeEEEEEcCCCCCccCCCcEEEEEEe-CCCceEEEEe
Q 022085 227 LDLVCRAHQLVQEGLKYMF-QDKGLVTVWSAPNYCYRCGNVASILSFN-ENMEREVKFF 283 (303)
Q Consensus 227 ~~~iIrgH~~~~~G~~~~~-~~~~~itifSa~~y~~~~~N~~avl~i~-~~~~~~~~~~ 283 (303)
=..++.|||+.. |.+..- .+++-+.+.|.|.|.. .|.++.+| ++++.+.+.|
T Consensus 204 PhVyf~Gnq~~f-~t~~~~~~~~~~v~lv~vP~Fs~----t~~~vlvdl~tLe~~~v~f 257 (257)
T cd07387 204 PHVYFAGNQPKF-GTKLVEGEEGQRVLLVCVPSFSK----TGTAVLVNLRTLECEPISF 257 (257)
T ss_pred CCEEEeCCCcce-eeeEEEcCCCCeEEEEEeCCcCc----CCEEEEEECCcCcEEEEeC
Confidence 367788999874 444432 2366788888899863 34544454 4677776654
No 97
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=95.23 E-value=0.027 Score=51.16 Aligned_cols=65 Identities=20% Similarity=0.226 Sum_probs=41.1
Q ss_pred CcceeecCCCCH----------HHHHHHHHhcCCCCCceEEEecCeecCCCCc-----HHHHHHHHHhhhhCCCeEEEEc
Q 022085 44 PVTVCGDIHGQF----------HDLMKLFQTGGHVPETNYIFMGDFVDRGYNS-----LEVFTILLLLKARYPANITLLR 108 (303)
Q Consensus 44 ~i~viGDIHG~~----------~~l~~ll~~~~~~~~~~~vfLGD~VDRG~~s-----~evl~~l~~lk~~~P~~v~~lr 108 (303)
+++.++|+||++ ..+..++++....+...++..||+++..+.+ ..++..+-.+.. .+ ...
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~g~----d~-~~~ 76 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPISDLDKGETIIKIMNAVGY----DA-VTP 76 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhcCC----cE-Ecc
Confidence 577899999974 3455666554433556777899999876643 234444433332 24 456
Q ss_pred CCchh
Q 022085 109 GNHES 113 (303)
Q Consensus 109 GNHE~ 113 (303)
||||.
T Consensus 77 GNHef 81 (257)
T cd07408 77 GNHEF 81 (257)
T ss_pred ccccc
Confidence 99995
No 98
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=95.19 E-value=1.4 Score=43.56 Aligned_cols=53 Identities=15% Similarity=0.028 Sum_probs=35.5
Q ss_pred ceEEEecccccccceeEEeCCCeEEEEEcCCCCCccCCCcEEEEEEeCC-CceEEEEeec
Q 022085 227 LDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNEN-MEREVKFFTE 285 (303)
Q Consensus 227 ~~~iIrgH~~~~~G~~~~~~~~~~itifSa~~y~~~~~N~~avl~i~~~-~~~~~~~~~~ 285 (303)
-+.++.||++. .|+..+. +.+++..+|.+.+.. .+-++-|+.. +.+.++.|..
T Consensus 419 PDv~~~Ghvh~-~g~~~y~-gv~~vns~T~q~qTe----fqk~vni~p~~~~v~vv~~~~ 472 (481)
T COG1311 419 PDVFHTGHVHK-FGTGVYE-GVNLVNSGTWQEQTE----FQKMVNINPTPGNVPVVDFDS 472 (481)
T ss_pred CcEEEEccccc-cceeEEe-ccceEEeeeecchhc----cceEEEecCcccceeEEeccc
Confidence 37888999998 6888866 778888888887653 3445555432 4445555544
No 99
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=94.19 E-value=0.084 Score=48.89 Aligned_cols=65 Identities=20% Similarity=0.288 Sum_probs=42.5
Q ss_pred CcceeecCCCCHH--------------HHHHHHHhcCC-CCCceEEEecCeecCCCC-c-----HHHHHHHHHhhhhCCC
Q 022085 44 PVTVCGDIHGQFH--------------DLMKLFQTGGH-VPETNYIFMGDFVDRGYN-S-----LEVFTILLLLKARYPA 102 (303)
Q Consensus 44 ~i~viGDIHG~~~--------------~l~~ll~~~~~-~~~~~~vfLGD~VDRG~~-s-----~evl~~l~~lk~~~P~ 102 (303)
+|+.+.|+||++. .+..+++.... .+...++..||++...+. + ..++..+-++...
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g~D--- 78 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMGVD--- 78 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhCCe---
Confidence 4778999999854 35555655432 344567779999987664 2 2456666555543
Q ss_pred eEEEEcCCchh
Q 022085 103 NITLLRGNHES 113 (303)
Q Consensus 103 ~v~~lrGNHE~ 113 (303)
+ +..||||.
T Consensus 79 -a-~t~GNHef 87 (288)
T cd07412 79 -A-SAVGNHEF 87 (288)
T ss_pred -e-eeeccccc
Confidence 3 55599996
No 100
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=93.29 E-value=0.13 Score=46.94 Aligned_cols=65 Identities=17% Similarity=0.169 Sum_probs=37.2
Q ss_pred CcceeecCCCCHH----------------------HHHHHHHhcCCC-CCc-eEEEecCeecCCCCc-----HHHHHHHH
Q 022085 44 PVTVCGDIHGQFH----------------------DLMKLFQTGGHV-PET-NYIFMGDFVDRGYNS-----LEVFTILL 94 (303)
Q Consensus 44 ~i~viGDIHG~~~----------------------~l~~ll~~~~~~-~~~-~~vfLGD~VDRG~~s-----~evl~~l~ 94 (303)
.++.++|+||++. .+..++++.... ..+ .++..||+++..+.+ ..++..+-
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l~ 81 (264)
T cd07411 2 TLLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDALN 81 (264)
T ss_pred EEEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHHH
Confidence 3567888888743 344455554322 333 345699999887643 23444444
Q ss_pred HhhhhCCCeEEEEcCCchhh
Q 022085 95 LLKARYPANITLLRGNHESR 114 (303)
Q Consensus 95 ~lk~~~P~~v~~lrGNHE~~ 114 (303)
++. -.+ +. ||||..
T Consensus 82 ~~g----~da-~~-GNHefd 95 (264)
T cd07411 82 ALG----VDA-MV-GHWEFT 95 (264)
T ss_pred hhC----CeE-Ee-cccccc
Confidence 433 223 33 999963
No 101
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=93.12 E-value=0.17 Score=46.62 Aligned_cols=71 Identities=20% Similarity=0.279 Sum_probs=43.2
Q ss_pred cceeecCCCC---HHHHHHHHHhcCC--CCCceEEEecCeecCCCCcH--H------HHHHHHHhhhhCCC-eEEEEcCC
Q 022085 45 VTVCGDIHGQ---FHDLMKLFQTGGH--VPETNYIFMGDFVDRGYNSL--E------VFTILLLLKARYPA-NITLLRGN 110 (303)
Q Consensus 45 i~viGDIHG~---~~~l~~ll~~~~~--~~~~~~vfLGD~VDRG~~s~--e------vl~~l~~lk~~~P~-~v~~lrGN 110 (303)
.--.|+-. | ...+..+++.+.. ++.+-+|+.||+++.+.... + .-.+...++..+|. .|+.+.||
T Consensus 40 ~~~~G~~~-CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GN 118 (296)
T cd00842 40 AGPWGDYG-CDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGN 118 (296)
T ss_pred CCCCcCcC-CCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCC
Confidence 44455554 4 3445556655433 36688999999998886531 1 12223334444443 59999999
Q ss_pred chhhhh
Q 022085 111 HESRQL 116 (303)
Q Consensus 111 HE~~~~ 116 (303)
||....
T Consensus 119 HD~~p~ 124 (296)
T cd00842 119 HDSYPV 124 (296)
T ss_pred CCCCcc
Confidence 998654
No 102
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=93.05 E-value=0.19 Score=46.34 Aligned_cols=66 Identities=20% Similarity=0.180 Sum_probs=38.8
Q ss_pred CcceeecCCCCH---------------------HHHHHHHHhcCC-CCCceEEEecCeecCCCCc-----HHHHHHHHHh
Q 022085 44 PVTVCGDIHGQF---------------------HDLMKLFQTGGH-VPETNYIFMGDFVDRGYNS-----LEVFTILLLL 96 (303)
Q Consensus 44 ~i~viGDIHG~~---------------------~~l~~ll~~~~~-~~~~~~vfLGD~VDRG~~s-----~evl~~l~~l 96 (303)
+++.++|+||++ ..+..+++.... .+...++-.||+++..+.+ ..+++.+-.+
T Consensus 2 ~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~~ 81 (281)
T cd07409 2 TILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNLL 81 (281)
T ss_pred EEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHhc
Confidence 467789999875 334455555432 2334455589999876632 3344444443
Q ss_pred hhhCCCeEEEEcCCchhh
Q 022085 97 KARYPANITLLRGNHESR 114 (303)
Q Consensus 97 k~~~P~~v~~lrGNHE~~ 114 (303)
... +. ..||||.-
T Consensus 82 g~D----~~-~lGNHefd 94 (281)
T cd07409 82 GYD----AM-TLGNHEFD 94 (281)
T ss_pred CCC----EE-Eecccccc
Confidence 322 43 45999963
No 103
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=92.74 E-value=0.23 Score=48.09 Aligned_cols=46 Identities=22% Similarity=0.345 Sum_probs=34.3
Q ss_pred CCCceEEEecCeecCCCCc--HHHHHHHHHhhhhCCC----eEEEEcCCchh
Q 022085 68 VPETNYIFMGDFVDRGYNS--LEVFTILLLLKARYPA----NITLLRGNHES 113 (303)
Q Consensus 68 ~~~~~~vfLGD~VDRG~~s--~evl~~l~~lk~~~P~----~v~~lrGNHE~ 113 (303)
...+.++||||++|-|+.. -|=-.....++..++. .++.+.||||-
T Consensus 92 lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDI 143 (410)
T KOG3662|consen 92 LKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGRKGNIKVIYIAGNHDI 143 (410)
T ss_pred cCCCEEEEeccccccCccCChHHHHHHHHHHHHhhCCCCCCeeEEeCCcccc
Confidence 4567899999999988754 3444555556666654 78999999996
No 104
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=92.55 E-value=0.22 Score=47.25 Aligned_cols=73 Identities=23% Similarity=0.378 Sum_probs=48.2
Q ss_pred CCcceeecCCCCHHHHH---HHHHhcCCCCCceEEEecCeec-C-CC--CcHHH-------HHHH--HHhhhhCCCeEEE
Q 022085 43 SPVTVCGDIHGQFHDLM---KLFQTGGHVPETNYIFMGDFVD-R-GY--NSLEV-------FTIL--LLLKARYPANITL 106 (303)
Q Consensus 43 ~~i~viGDIHG~~~~l~---~ll~~~~~~~~~~~vfLGD~VD-R-G~--~s~ev-------l~~l--~~lk~~~P~~v~~ 106 (303)
|||.|-|=.||.++.+- ...++.|..+-|.++++||+=- | +. +|+.| =.+. +.=...+|=--++
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 68999999999999987 4456667778899999999831 1 11 11111 1111 1112345655678
Q ss_pred EcCCchhhh
Q 022085 107 LRGNHESRQ 115 (303)
Q Consensus 107 lrGNHE~~~ 115 (303)
+-||||.+.
T Consensus 81 IGGNHEAsn 89 (456)
T KOG2863|consen 81 IGGNHEASN 89 (456)
T ss_pred ecCchHHHH
Confidence 999999975
No 105
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=91.85 E-value=0.2 Score=55.17 Aligned_cols=66 Identities=18% Similarity=0.212 Sum_probs=41.5
Q ss_pred CCcceeecCCCCH---HHHHHHHHhcCCCCCceEEE-ecCeecCCCCc-----HHHHHHHHHhhhhCCCeEEEEcCCchh
Q 022085 43 SPVTVCGDIHGQF---HDLMKLFQTGGHVPETNYIF-MGDFVDRGYNS-----LEVFTILLLLKARYPANITLLRGNHES 113 (303)
Q Consensus 43 ~~i~viGDIHG~~---~~l~~ll~~~~~~~~~~~vf-LGD~VDRG~~s-----~evl~~l~~lk~~~P~~v~~lrGNHE~ 113 (303)
.+|+.++|+||.+ ..+..+++.......+.+++ .||++++.+.+ ..+++.+-++.. -....||||.
T Consensus 661 l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~lg~-----d~~~~GNHEf 735 (1163)
T PRK09419 661 LTILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEMGY-----DASTFGNHEF 735 (1163)
T ss_pred EEEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCcCC-----CEEEeccccc
Confidence 4689999999985 34444555443222344444 89999987644 245555544432 2468999996
No 106
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=91.70 E-value=0.33 Score=41.95 Aligned_cols=45 Identities=24% Similarity=0.263 Sum_probs=30.1
Q ss_pred CCCCceEEEecCeec--CCCCcHHHHHHHHHhhhhCCCeEEEEcCCchhhh
Q 022085 67 HVPETNYIFMGDFVD--RGYNSLEVFTILLLLKARYPANITLLRGNHESRQ 115 (303)
Q Consensus 67 ~~~~~~~vfLGD~VD--RG~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~~ 115 (303)
..++|.++.-||+-- |=+...+=+.++-+ -|..-+++|||||...
T Consensus 41 v~~eDiVllpGDiSWaM~l~ea~~Dl~~i~~----LPG~K~m~rGNHDYWw 87 (230)
T COG1768 41 VSPEDIVLLPGDISWAMRLEEAEEDLRFIGD----LPGTKYMIRGNHDYWW 87 (230)
T ss_pred CChhhEEEecccchhheechhhhhhhhhhhc----CCCcEEEEecCCcccc
Confidence 346788888999842 23334444555543 4677899999999864
No 107
>KOG0918 consensus Selenium-binding protein [Inorganic ion transport and metabolism]
Probab=91.47 E-value=0.024 Score=54.18 Aligned_cols=193 Identities=11% Similarity=-0.021 Sum_probs=119.6
Q ss_pred CceEEEecCeecCCCCcHHHHHHHHHhhhhCCCeEEEEcCCchhhhhhhccCChHHHHHHh---CCchhhhhhhHHHhcc
Q 022085 70 ETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKY---GNANAWRYCTDVFDYL 146 (303)
Q Consensus 70 ~~~~vfLGD~VDRG~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~~~~~~~gf~~e~~~~~---~~~~~~~~~~~~f~~L 146 (303)
.-..|+++++++++.++++.+.+-+..+..+-.+...+++||+.. +++.++....- +...+++..++.++..
T Consensus 48 ~latVdvdp~s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~~~~-----~~~R~~LVlp~l~S~riyvid~~~ep~~~~ 122 (476)
T KOG0918|consen 48 YLATVDVDPSSPTYCQVIHRLPMPYLGDELHHSGWNSCSSCHGDS-----SFKRRYLVLPSLNSGRIYVIDVKTEPRKPS 122 (476)
T ss_pred ceeEEecCCCCCcceeeEEEeccCcccchhcccchhhhhhhccCc-----chhhhheeecccccCceEEEEeccCcCccc
Confidence 456899999999999999999988888888777888999999543 23333322111 1234667778888888
Q ss_pred cceeEEeceEEEEcCCCCCCCCCHHHHHhhhccccCCCCCCccccccCCCCCCC-----CCccCCCCCceeeCcc--hhh
Q 022085 147 TLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIE-----TWAVSPRGAGWLFGSR--VTS 219 (303)
Q Consensus 147 P~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~-----~~~~~~rg~g~~fg~~--~~~ 219 (303)
+...+.+ ++++.||+..|.......+..+.-.. .-+.....+. |-.+.+.+ .|... +...+||.+ ..-
T Consensus 123 l~k~i~~-~il~~~~l~~Pht~hcla~g~v~vs~-lGd~~gn~kg-~f~llD~~~~~k~tw~~~--~~~p~~gyDfwyqp 197 (476)
T KOG0918|consen 123 LEKTIDP-DILEKTGLACPHTSHCLASGNVMVSC-LGDAEGNAKG-GFLLLDSDFNEKGTWEKP--GHSPLFGYDFWYQP 197 (476)
T ss_pred eeeeech-hhHhhcCCcCCcccccccCCCeeEEe-ecccccCCcC-CeEEecCccceecccccC--CCccccccceeecc
Confidence 8887766 89999999999875444333211100 0000001111 33322222 33322 233344443 233
Q ss_pred hhhhhCCceEEEecccccccceeEEe-CCCeEEEEEcCCCCCccCCCcEEEEEEeCCC
Q 022085 220 EFNHINNLDLVCRAHQLVQEGLKYMF-QDKGLVTVWSAPNYCYRCGNVASILSFNENM 276 (303)
Q Consensus 220 ~fl~~~~~~~iIrgH~~~~~G~~~~~-~~~~~itifSa~~y~~~~~N~~avl~i~~~~ 276 (303)
++......+...+.|.. .||...+ +++ ++.++.+-|.-..+|..+.+.+..++
T Consensus 198 r~~~mIstewgap~~~~--~gf~~~~v~d~--lyg~~lhvy~w~~~~~~QtidL~~~g 251 (476)
T KOG0918|consen 198 RHNVMISTEWGAPNALR--KGFNPADVEDG--LYGSHLHVYQWSPGELKQTIDLGDTG 251 (476)
T ss_pred ccceEEeecccCchhhh--cCCChhHhhcc--ceeeeeEEEecCCccceeEEecCCCC
Confidence 44455566667777775 4554433 344 78888888887778899999998764
No 108
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=90.51 E-value=0.49 Score=43.47 Aligned_cols=67 Identities=16% Similarity=0.138 Sum_probs=49.4
Q ss_pred CCcceeecCCCC--HHHHHHHHHhcCC-CCCceEEEecCeecCC-CCcHHHHHHHHHhhhhCCCeEEEEcCCchhh
Q 022085 43 SPVTVCGDIHGQ--FHDLMKLFQTGGH-VPETNYIFMGDFVDRG-YNSLEVFTILLLLKARYPANITLLRGNHESR 114 (303)
Q Consensus 43 ~~i~viGDIHG~--~~~l~~ll~~~~~-~~~~~~vfLGD~VDRG-~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~ 114 (303)
|+|.++|||=|. ...+...|..+.. .+.+-+|..||...-| .-+.++.+.|..+-.. ++.+ |||+.-
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~GvD----viT~-GNH~~D 71 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQSGVN----YITM-GNHTWF 71 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhcCCC----EEEc-cchhcc
Confidence 679999999999 5566666665543 2346777789998766 4578888888877655 5555 999974
No 109
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=90.29 E-value=0.48 Score=43.01 Aligned_cols=56 Identities=25% Similarity=0.242 Sum_probs=36.3
Q ss_pred CCHHHHHHHHHhcCCC-CCceEEEecCeecCCCCc-----HHHHHHHHHhhhhCCCeEEEEcCCchh
Q 022085 53 GQFHDLMKLFQTGGHV-PETNYIFMGDFVDRGYNS-----LEVFTILLLLKARYPANITLLRGNHES 113 (303)
Q Consensus 53 G~~~~l~~ll~~~~~~-~~~~~vfLGD~VDRG~~s-----~evl~~l~~lk~~~P~~v~~lrGNHE~ 113 (303)
|-+..+..++++.... +...++..||+++.++.+ ..++..+-++.. -+...||||.
T Consensus 21 gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~~-----d~~~~GNHef 82 (257)
T cd07406 21 GGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALGV-----DLACFGNHEF 82 (257)
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcCC-----cEEeeccccc
Confidence 4466777777765433 344677799999887532 456666555542 2457899996
No 110
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=88.53 E-value=0.51 Score=43.60 Aligned_cols=66 Identities=20% Similarity=0.103 Sum_probs=37.9
Q ss_pred CcceeecCCCCHHH----------HHHHHHhcCC-----CCCceEEEecCeecCCCC-----cHHHHHHHHHhhhhCCCe
Q 022085 44 PVTVCGDIHGQFHD----------LMKLFQTGGH-----VPETNYIFMGDFVDRGYN-----SLEVFTILLLLKARYPAN 103 (303)
Q Consensus 44 ~i~viGDIHG~~~~----------l~~ll~~~~~-----~~~~~~vfLGD~VDRG~~-----s~evl~~l~~lk~~~P~~ 103 (303)
.|+.+.|+||++.. +..++++... .+...++-.||.+...+. ...+++++-++...
T Consensus 2 tIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g~D---- 77 (285)
T cd07405 2 TILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGYD---- 77 (285)
T ss_pred EEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhCCc----
Confidence 46788999998533 3344443321 334456669999843332 23345555555543
Q ss_pred EEEEcCCchhh
Q 022085 104 ITLLRGNHESR 114 (303)
Q Consensus 104 v~~lrGNHE~~ 114 (303)
+. ..||||.-
T Consensus 78 a~-~~GNHEfD 87 (285)
T cd07405 78 AM-AVGNHEFD 87 (285)
T ss_pred EE-eecccccc
Confidence 43 44999963
No 111
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=88.41 E-value=0.79 Score=39.95 Aligned_cols=72 Identities=14% Similarity=0.184 Sum_probs=39.7
Q ss_pred cceeecCCCC-----HHHHHHHHHhcC-CCCCceEEEecCeecCCCCcH-------------HHHHHHHHhhhhCC--Ce
Q 022085 45 VTVCGDIHGQ-----FHDLMKLFQTGG-HVPETNYIFMGDFVDRGYNSL-------------EVFTILLLLKARYP--AN 103 (303)
Q Consensus 45 i~viGDIHG~-----~~~l~~ll~~~~-~~~~~~~vfLGD~VDRG~~s~-------------evl~~l~~lk~~~P--~~ 103 (303)
|++++|+|=. ++.|.++|+... ....+.+|++|+++|.-.... ..+..+.+.....+ -+
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 4677777755 566777777766 555688999999999632221 11111211111111 38
Q ss_pred EEEEcCCchhhhh
Q 022085 104 ITLLRGNHESRQL 116 (303)
Q Consensus 104 v~~lrGNHE~~~~ 116 (303)
|++++|+||-...
T Consensus 81 vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 81 VVLVPGPNDPTSS 93 (209)
T ss_dssp EEEE--TTCTT-S
T ss_pred EEEeCCCcccccc
Confidence 9999999997654
No 112
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=86.95 E-value=6.1 Score=34.33 Aligned_cols=85 Identities=13% Similarity=0.235 Sum_probs=62.2
Q ss_pred ceEEEecCeecCCCCcHHHHHHHHHhhhhCCCeEEEEcCCchhhhhhhccCCh----------------HHHHHHhCCch
Q 022085 71 TNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFY----------------DECQRKYGNAN 134 (303)
Q Consensus 71 ~~~vfLGD~VDRG~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~~~~~~~gf~----------------~e~~~~~~~~~ 134 (303)
..+||+|- |-+.-|++.++-.|+..|-.+-++ .|+-|.|..++...|. .|..++| -..
T Consensus 40 ~~lVvlGS----GGHT~EMlrLl~~l~~~y~~r~yI-~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~-ltS 113 (211)
T KOG3339|consen 40 STLVVLGS----GGHTGEMLRLLEALQDLYSPRSYI-AADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSW-LTS 113 (211)
T ss_pred eEEEEEcC----CCcHHHHHHHHHHHHhhcCceEEE-EecCchhhHHHHHhhhccccccchhheecchhhhhhhhh-hhh
Confidence 56999986 889999999999999998775544 8999999877644432 2222333 235
Q ss_pred hhhhhhHHHhcccceeEEeceEEEEcC
Q 022085 135 AWRYCTDVFDYLTLSAIIDGTVLCVHG 161 (303)
Q Consensus 135 ~~~~~~~~f~~LP~~~~i~~~~l~vHg 161 (303)
++..+.....++++...+...++.+.|
T Consensus 114 v~Tti~all~s~~lv~RirPdlil~NG 140 (211)
T KOG3339|consen 114 VFTTIWALLQSFVLVWRIRPDLILCNG 140 (211)
T ss_pred HHHHHHHHHHHheEEEecCCCEEEECC
Confidence 666677777888887777666777776
No 113
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=86.56 E-value=0.69 Score=42.83 Aligned_cols=67 Identities=21% Similarity=0.146 Sum_probs=39.2
Q ss_pred CCcceeecCCCCHH-------------HHHHHHHhc----CC-CCCceEEEecCeecCCCCc-------HHHHHHHHHhh
Q 022085 43 SPVTVCGDIHGQFH-------------DLMKLFQTG----GH-VPETNYIFMGDFVDRGYNS-------LEVFTILLLLK 97 (303)
Q Consensus 43 ~~i~viGDIHG~~~-------------~l~~ll~~~----~~-~~~~~~vfLGD~VDRG~~s-------~evl~~l~~lk 97 (303)
..|+-+.|+||.+. .+.++.+.. .. .++..++..||.++.-+.+ ..+++++-++.
T Consensus 6 ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~mg 85 (282)
T cd07407 6 INFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRMMP 85 (282)
T ss_pred EEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHhcC
Confidence 46888999999763 122222221 11 2334556699998865433 22455554444
Q ss_pred hhCCCeEEEEcCCchhh
Q 022085 98 ARYPANITLLRGNHESR 114 (303)
Q Consensus 98 ~~~P~~v~~lrGNHE~~ 114 (303)
.. ....||||..
T Consensus 86 yD-----a~tlGNHEFd 97 (282)
T cd07407 86 YD-----LLTIGNHELY 97 (282)
T ss_pred Cc-----EEeecccccC
Confidence 33 4788999994
No 114
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=85.51 E-value=0.95 Score=45.40 Aligned_cols=69 Identities=20% Similarity=0.268 Sum_probs=44.9
Q ss_pred cCCCcceeecCCCCHH------------HHHH---HHHhcCC-CCCceEEEecCeecCCC------CcHHHHHHHHHhhh
Q 022085 41 VNSPVTVCGDIHGQFH------------DLMK---LFQTGGH-VPETNYIFMGDFVDRGY------NSLEVFTILLLLKA 98 (303)
Q Consensus 41 ~~~~i~viGDIHG~~~------------~l~~---ll~~~~~-~~~~~~vfLGD~VDRG~------~s~evl~~l~~lk~ 98 (303)
.+.+|+-+.|+||.+. .+.+ ++++..- .++..+|=.||++++.+ ....++.++-.++.
T Consensus 25 ~~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~y 104 (517)
T COG0737 25 VKLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALGY 104 (517)
T ss_pred eeEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcCC
Confidence 3567899999999998 3333 3333222 22344555999999844 33456777776665
Q ss_pred hCCCeEEEEcCCchhh
Q 022085 99 RYPANITLLRGNHESR 114 (303)
Q Consensus 99 ~~P~~v~~lrGNHE~~ 114 (303)
. ....||||.-
T Consensus 105 D-----a~tiGNHEFd 115 (517)
T COG0737 105 D-----AMTLGNHEFD 115 (517)
T ss_pred c-----EEeecccccc
Confidence 4 4778999984
No 115
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=85.43 E-value=1.1 Score=42.07 Aligned_cols=65 Identities=20% Similarity=0.109 Sum_probs=41.2
Q ss_pred CcceeecCCCCHH------HHHHHHHhcCC-----CCCceEEEecCeecCCCC-------------cHHHHHHHHHhhhh
Q 022085 44 PVTVCGDIHGQFH------DLMKLFQTGGH-----VPETNYIFMGDFVDRGYN-------------SLEVFTILLLLKAR 99 (303)
Q Consensus 44 ~i~viGDIHG~~~------~l~~ll~~~~~-----~~~~~~vfLGD~VDRG~~-------------s~evl~~l~~lk~~ 99 (303)
.|+-+.|+||++. .+..+++.... .++..++..||.+..++. ...+++++-++...
T Consensus 2 ~IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g~D 81 (313)
T cd08162 2 QLLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALGVQ 81 (313)
T ss_pred eEEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccCCc
Confidence 3667889999953 34334443321 334567779999876543 34556666666654
Q ss_pred CCCeEEEEcCCchh
Q 022085 100 YPANITLLRGNHES 113 (303)
Q Consensus 100 ~P~~v~~lrGNHE~ 113 (303)
.+..||||.
T Consensus 82 -----a~tlGNHEF 90 (313)
T cd08162 82 -----AIALGNHEF 90 (313)
T ss_pred -----EEecccccc
Confidence 477899995
No 116
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=83.96 E-value=1.1 Score=46.32 Aligned_cols=69 Identities=19% Similarity=0.213 Sum_probs=44.7
Q ss_pred ccCCCcceeecCCCCHHH----------------HHHHHHhcCC-CCCceEEEecCeecCCCCcH-------------HH
Q 022085 40 PVNSPVTVCGDIHGQFHD----------------LMKLFQTGGH-VPETNYIFMGDFVDRGYNSL-------------EV 89 (303)
Q Consensus 40 ~~~~~i~viGDIHG~~~~----------------l~~ll~~~~~-~~~~~~vfLGD~VDRG~~s~-------------ev 89 (303)
....+|+-..|+||++.. +..++++... .++..+|-.||.+...+.+- .+
T Consensus 23 ~~~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~ 102 (649)
T PRK09420 23 TVDLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPV 102 (649)
T ss_pred CceEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchH
Confidence 456789999999999642 3334443321 23456777999998766431 25
Q ss_pred HHHHHHhhhhCCCeEEEEcCCchh
Q 022085 90 FTILLLLKARYPANITLLRGNHES 113 (303)
Q Consensus 90 l~~l~~lk~~~P~~v~~lrGNHE~ 113 (303)
+..+-.+... ....||||.
T Consensus 103 i~amN~lgyD-----a~tlGNHEF 121 (649)
T PRK09420 103 YKAMNTLDYD-----VGNLGNHEF 121 (649)
T ss_pred HHHHHhcCCc-----EEeccchhh
Confidence 6666555543 478899995
No 117
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=83.26 E-value=2.3 Score=38.76 Aligned_cols=66 Identities=18% Similarity=0.139 Sum_probs=45.0
Q ss_pred CcceeecCCCCHHH--HHHHHHhcCC-CCCceEEEecCeecCC-CCcHHHHHHHHHhhhhCCCeEEEEcCCchhh
Q 022085 44 PVTVCGDIHGQFHD--LMKLFQTGGH-VPETNYIFMGDFVDRG-YNSLEVFTILLLLKARYPANITLLRGNHESR 114 (303)
Q Consensus 44 ~i~viGDIHG~~~~--l~~ll~~~~~-~~~~~~vfLGD~VDRG-~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~ 114 (303)
++.+||||=|..-. +.+.+..... .+.+-++-.||..--| .-+.++.+.|..+... +..+ ||||.-
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G~D----~iTl-GNH~fD 70 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAGVD----VITM-GNHTWD 70 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcCCC----EEEe-cccccC
Confidence 57899999998543 3445544432 2345666689998766 4677888888877755 4444 999763
No 118
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=82.75 E-value=1.3 Score=45.73 Aligned_cols=66 Identities=23% Similarity=0.256 Sum_probs=41.2
Q ss_pred CCcceeecCCCCHHH----------------HHHHHHhcCC-CCCceEEEecCeecCCCCc-------------HHHHHH
Q 022085 43 SPVTVCGDIHGQFHD----------------LMKLFQTGGH-VPETNYIFMGDFVDRGYNS-------------LEVFTI 92 (303)
Q Consensus 43 ~~i~viGDIHG~~~~----------------l~~ll~~~~~-~~~~~~vfLGD~VDRG~~s-------------~evl~~ 92 (303)
.+|+-..|+||++.. +..++++... .++..+|-.||.+...+.+ ..++.+
T Consensus 3 l~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~ 82 (626)
T TIGR01390 3 LRIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKA 82 (626)
T ss_pred EEEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHH
Confidence 467889999999643 3334444321 2345566699999865543 234555
Q ss_pred HHHhhhhCCCeEEEEcCCchh
Q 022085 93 LLLLKARYPANITLLRGNHES 113 (303)
Q Consensus 93 l~~lk~~~P~~v~~lrGNHE~ 113 (303)
+-.|... ....||||.
T Consensus 83 mN~lgyD-----a~tlGNHEF 98 (626)
T TIGR01390 83 MNLLKYD-----VGNLGNHEF 98 (626)
T ss_pred HhhcCcc-----EEecccccc
Confidence 5555433 477899995
No 119
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=81.59 E-value=3.3 Score=41.52 Aligned_cols=57 Identities=16% Similarity=0.138 Sum_probs=44.7
Q ss_pred cCCCcceeecCCC------------CHHHHHHHHHhcCCCCCceEEEecCeecCCCCcHHHHHHHHHhh
Q 022085 41 VNSPVTVCGDIHG------------QFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLK 97 (303)
Q Consensus 41 ~~~~i~viGDIHG------------~~~~l~~ll~~~~~~~~~~~vfLGD~VDRG~~s~evl~~l~~lk 97 (303)
-..+|.|-.|+|= .+..+.++|+.+....-|-++.-||+..-..-|.+++.-...+-
T Consensus 12 ntirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkPSr~~L~~~i~lL 80 (646)
T KOG2310|consen 12 NTIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENKPSRKTLHRCLELL 80 (646)
T ss_pred cceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCCccHHHHHHHHHHH
Confidence 3468999999984 36678889988777777899999999998888877766555543
No 120
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=81.34 E-value=1.7 Score=48.02 Aligned_cols=67 Identities=24% Similarity=0.304 Sum_probs=40.2
Q ss_pred CCCcceeecCCCCHHH----------------HHHHHHhcCC-CCCceEEEecCeecCCCC--------------cHHHH
Q 022085 42 NSPVTVCGDIHGQFHD----------------LMKLFQTGGH-VPETNYIFMGDFVDRGYN--------------SLEVF 90 (303)
Q Consensus 42 ~~~i~viGDIHG~~~~----------------l~~ll~~~~~-~~~~~~vfLGD~VDRG~~--------------s~evl 90 (303)
..+|+.+.|+||++.. +..+++.... .++..+|-.||.+...+. ...++
T Consensus 41 ~l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~l~~~~~~~~~~~~~~~~~~i 120 (1163)
T PRK09419 41 NIQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNPLGEYAVKDNILFKNKTHPMI 120 (1163)
T ss_pred EEEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCChhhhHHhhhccccCCCcCHHH
Confidence 4569999999998632 3344444322 233334449999986652 12345
Q ss_pred HHHHHhhhhCCCeEEEEcCCchh
Q 022085 91 TILLLLKARYPANITLLRGNHES 113 (303)
Q Consensus 91 ~~l~~lk~~~P~~v~~lrGNHE~ 113 (303)
..+-++... ....||||.
T Consensus 121 ~~mN~lgyD-----a~~lGNHEF 138 (1163)
T PRK09419 121 KAMNALGYD-----AGTLGNHEF 138 (1163)
T ss_pred HHHhhcCcc-----EEeeccccc
Confidence 544444432 466899996
No 121
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=80.54 E-value=4.8 Score=37.40 Aligned_cols=72 Identities=22% Similarity=0.382 Sum_probs=48.0
Q ss_pred CCcceeecCCCC----HHHHHHHHHhc-CCCC----CceEEEecCeecCC----CCc----HHHHHHHHH-hhhhCC---
Q 022085 43 SPVTVCGDIHGQ----FHDLMKLFQTG-GHVP----ETNYIFMGDFVDRG----YNS----LEVFTILLL-LKARYP--- 101 (303)
Q Consensus 43 ~~i~viGDIHG~----~~~l~~ll~~~-~~~~----~~~~vfLGD~VDRG----~~s----~evl~~l~~-lk~~~P--- 101 (303)
..++|+||+|=+ ++.|.++|+.. ...+ ...+||+|+++-+. ..+ .+-.+-|.. +...||
T Consensus 28 ~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp~L~ 107 (291)
T PTZ00235 28 HNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFKLIL 107 (291)
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhChHHH
Confidence 569999999954 66777777765 2222 45799999998763 222 233444444 234566
Q ss_pred --CeEEEEcCCchhh
Q 022085 102 --ANITLLRGNHESR 114 (303)
Q Consensus 102 --~~v~~lrGNHE~~ 114 (303)
.++++++|-.|-.
T Consensus 108 ~~s~fVFVPGpnDPw 122 (291)
T PTZ00235 108 EHCYLIFIPGINDPC 122 (291)
T ss_pred hcCeEEEECCCCCCC
Confidence 3899999999964
No 122
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=79.89 E-value=4.5 Score=39.76 Aligned_cols=70 Identities=27% Similarity=0.415 Sum_probs=52.4
Q ss_pred cCCCcceeecCCCCHHHHHHHHHhcCC--CCCceEEEecCeecCCCCcHHHHHHHHHhhhhCCCeEEEEcCCc
Q 022085 41 VNSPVTVCGDIHGQFHDLMKLFQTGGH--VPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNH 111 (303)
Q Consensus 41 ~~~~i~viGDIHG~~~~l~~ll~~~~~--~~~~~~vfLGD~VDRG~~s~evl~~l~~lk~~~P~~v~~lrGNH 111 (303)
.+.+|.|+||.-|+++.|.+-+++... .|-+.++++|++.+-...+.|++.+.-.-+ ..|--++++-+|-
T Consensus 4 ~~~kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~~-~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 4 ADAKILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGTK-KVPIPTYFLGDNA 75 (528)
T ss_pred CCceEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCCc-cCceeEEEecCCC
Confidence 357999999999999999877766543 345889999999987667778777665433 4566677777765
No 123
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=78.11 E-value=2.2 Score=43.15 Aligned_cols=68 Identities=21% Similarity=0.132 Sum_probs=39.6
Q ss_pred cCCCcceeecCCCCHH----------HHHHHHHhcC-----CCCCceEEEecCeecCCCCc-----HHHHHHHHHhhhhC
Q 022085 41 VNSPVTVCGDIHGQFH----------DLMKLFQTGG-----HVPETNYIFMGDFVDRGYNS-----LEVFTILLLLKARY 100 (303)
Q Consensus 41 ~~~~i~viGDIHG~~~----------~l~~ll~~~~-----~~~~~~~vfLGD~VDRG~~s-----~evl~~l~~lk~~~ 100 (303)
.+..|+-+.|+||++. .+..+++... ..++..++..||.+...+.+ ..+++++-++...
T Consensus 33 ~~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~g~D- 111 (551)
T PRK09558 33 YKITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLIGYD- 111 (551)
T ss_pred eEEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcCCCC-
Confidence 3456889999999874 1223333322 13445677799998644322 2344555444433
Q ss_pred CCeEEEEcCCchh
Q 022085 101 PANITLLRGNHES 113 (303)
Q Consensus 101 P~~v~~lrGNHE~ 113 (303)
+ ...||||.
T Consensus 112 ---a-~tlGNHEF 120 (551)
T PRK09558 112 ---A-MAVGNHEF 120 (551)
T ss_pred ---E-Eccccccc
Confidence 4 44599996
No 124
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=77.87 E-value=2.8 Score=44.45 Aligned_cols=67 Identities=18% Similarity=0.189 Sum_probs=42.0
Q ss_pred CCCcceeecCCCCHHH----------------HHHHHHhcC-CCCCceEEEecCeecCCCCc--------------HHHH
Q 022085 42 NSPVTVCGDIHGQFHD----------------LMKLFQTGG-HVPETNYIFMGDFVDRGYNS--------------LEVF 90 (303)
Q Consensus 42 ~~~i~viGDIHG~~~~----------------l~~ll~~~~-~~~~~~~vfLGD~VDRG~~s--------------~evl 90 (303)
+.+|+-..|+||++.. +..+++... ..++..+|-.||.+..-+.+ ..++
T Consensus 115 ~LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i 194 (814)
T PRK11907 115 DVRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMY 194 (814)
T ss_pred EEEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHHH
Confidence 4568899999999642 223333332 12345677799999865532 1356
Q ss_pred HHHHHhhhhCCCeEEEEcCCchh
Q 022085 91 TILLLLKARYPANITLLRGNHES 113 (303)
Q Consensus 91 ~~l~~lk~~~P~~v~~lrGNHE~ 113 (303)
..+-.|... ....||||.
T Consensus 195 ~amN~LGyD-----A~tLGNHEF 212 (814)
T PRK11907 195 AALEALGFD-----AGTLGNHEF 212 (814)
T ss_pred HHHhccCCC-----EEEechhhc
Confidence 666555543 478899995
No 125
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=75.79 E-value=4 Score=39.64 Aligned_cols=71 Identities=11% Similarity=0.097 Sum_probs=41.7
Q ss_pred CCCcceeecCC-CCHHHH--HHHHHh-cCCCCCceEEEecCeecCCCCcH------HHHHHHHHhh---hhCCCeEEEEc
Q 022085 42 NSPVTVCGDIH-GQFHDL--MKLFQT-GGHVPETNYIFMGDFVDRGYNSL------EVFTILLLLK---ARYPANITLLR 108 (303)
Q Consensus 42 ~~~i~viGDIH-G~~~~l--~~ll~~-~~~~~~~~~vfLGD~VDRG~~s~------evl~~l~~lk---~~~P~~v~~lr 108 (303)
+.+++++||-= |..... .+.+.. +...+.+-+|-+||-.+.|..|+ +..+-++.-. .+- ..+++.
T Consensus 26 ~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~--Pwy~vL 103 (394)
T PTZ00422 26 QLRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQI--PFFTVL 103 (394)
T ss_pred eEEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCC--CeEEeC
Confidence 45799999953 322211 122222 22345677888999888887653 3344444221 112 389999
Q ss_pred CCchhh
Q 022085 109 GNHESR 114 (303)
Q Consensus 109 GNHE~~ 114 (303)
||||..
T Consensus 104 GNHDy~ 109 (394)
T PTZ00422 104 GQADWD 109 (394)
T ss_pred Cccccc
Confidence 999973
No 126
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=75.47 E-value=3.5 Score=40.51 Aligned_cols=33 Identities=12% Similarity=0.050 Sum_probs=26.7
Q ss_pred hhhhhhhhCCceEEEecccccccceeEEeCCCeE
Q 022085 217 VTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGL 250 (303)
Q Consensus 217 ~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~~ 250 (303)
.++..+-+++++.++-||...-+...... |.++
T Consensus 323 ~LE~l~~~~~VDvvf~GHvH~YER~~piy-n~~~ 355 (452)
T KOG1378|consen 323 GLEPLFVKYKVDVVFWGHVHRYERFCPIY-NNTC 355 (452)
T ss_pred HHHHHHHHhceeEEEeccceehhccchhh-ccee
Confidence 58999999999999999998877765544 5553
No 127
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=74.24 E-value=5.1 Score=38.08 Aligned_cols=48 Identities=13% Similarity=0.100 Sum_probs=29.9
Q ss_pred CCCCceEEEecCeecCCCCc---HHHHHHHHHhhhhCCCeEEEEcCCchhhh
Q 022085 67 HVPETNYIFMGDFVDRGYNS---LEVFTILLLLKARYPANITLLRGNHESRQ 115 (303)
Q Consensus 67 ~~~~~~~vfLGD~VDRG~~s---~evl~~l~~lk~~~P~~v~~lrGNHE~~~ 115 (303)
....|.+||+||.|+. ... ...+....+-.+.+.=-...+.||||...
T Consensus 98 sE~PDlVVfTGD~i~g-~~t~Da~~sl~kAvaP~I~~~IPwA~~lGNHDdes 148 (379)
T KOG1432|consen 98 SEKPDLVVFTGDNIFG-HSTQDAATSLMKAVAPAIDRKIPWAAVLGNHDDES 148 (379)
T ss_pred ccCCCEEEEeCCcccc-cccHhHHHHHHHHhhhHhhcCCCeEEEeccccccc
Confidence 3456899999999996 333 33333333333333223568899999864
No 128
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=74.00 E-value=4 Score=37.60 Aligned_cols=65 Identities=25% Similarity=0.286 Sum_probs=43.8
Q ss_pred CCcceeecCCCCHHHHHHHHHhcCCCCCceEEEecCeecCCCCcHHHHHHHHHhhhhCCC-eEEEEcCCchhhh
Q 022085 43 SPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPA-NITLLRGNHESRQ 115 (303)
Q Consensus 43 ~~i~viGDIHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDRG~~s~evl~~l~~lk~~~P~-~v~~lrGNHE~~~ 115 (303)
.+++.|+|-|+...+.. ..++.|-++-+||+-.-|. +-||+.+=..+- ..|. .=+.|+||||...
T Consensus 62 ~r~VcisdtH~~~~~i~------~~p~gDvlihagdfT~~g~-~~ev~~fn~~~g-slph~yKIVIaGNHELtF 127 (305)
T KOG3947|consen 62 ARFVCISDTHELTFDIN------DIPDGDVLIHAGDFTNLGL-PEEVIKFNEWLG-SLPHEYKIVIAGNHELTF 127 (305)
T ss_pred eEEEEecCcccccCccc------cCCCCceEEeccCCccccC-HHHHHhhhHHhc-cCcceeeEEEeeccceee
Confidence 47999999998765543 2566677899999977664 456655433222 2232 4568999999853
No 129
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=73.64 E-value=5.6 Score=40.32 Aligned_cols=64 Identities=14% Similarity=0.054 Sum_probs=38.5
Q ss_pred cceeecCCCCHHH---------------------HHHHHHhcC-CCCCceEEEecCeecCCCCc-----HHHHHHHHHhh
Q 022085 45 VTVCGDIHGQFHD---------------------LMKLFQTGG-HVPETNYIFMGDFVDRGYNS-----LEVFTILLLLK 97 (303)
Q Consensus 45 i~viGDIHG~~~~---------------------l~~ll~~~~-~~~~~~~vfLGD~VDRG~~s-----~evl~~l~~lk 97 (303)
|+-+.|+||++.. +..++++.. ..++..++..||.+...+.+ ..+++++-++.
T Consensus 3 ILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~g 82 (550)
T TIGR01530 3 IIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAESKNALVLHAGDAIIGTLYFTLFGGRADAALMNAAG 82 (550)
T ss_pred EEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhCCCeEEEECCCCCCCccchhhcCCHHHHHHHhccC
Confidence 5567788887533 333344332 23455677799998765533 33455554554
Q ss_pred hhCCCeEEEEcCCchh
Q 022085 98 ARYPANITLLRGNHES 113 (303)
Q Consensus 98 ~~~P~~v~~lrGNHE~ 113 (303)
.. ....||||.
T Consensus 83 ~D-----a~~lGNHEF 93 (550)
T TIGR01530 83 FD-----FFTLGNHEF 93 (550)
T ss_pred CC-----EEEeccccc
Confidence 33 578899996
No 130
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=72.37 E-value=2.4 Score=41.72 Aligned_cols=42 Identities=21% Similarity=0.377 Sum_probs=33.9
Q ss_pred CceEEEecCeecCCCCcHHHHHHHHHhhhhCCCeEEEEcCCchhhhh
Q 022085 70 ETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQL 116 (303)
Q Consensus 70 ~~~~vfLGD~VDRG~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~~~ 116 (303)
.|.+-.+||+-||||++-.+++-|..+. ++=+--||||-..+
T Consensus 191 VDhLHiVGDIyDRGP~pd~Imd~L~~yh-----svDiQWGNHDilWm 232 (648)
T COG3855 191 VDHLHIVGDIYDRGPYPDKIMDTLINYH-----SVDIQWGNHDILWM 232 (648)
T ss_pred hhheeeecccccCCCCchHHHHHHhhcc-----cccccccCcceEEe
Confidence 4678889999999999999999887543 36677899997533
No 131
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=65.22 E-value=8.4 Score=40.80 Aligned_cols=68 Identities=21% Similarity=0.242 Sum_probs=41.7
Q ss_pred cCCCcceeecCCCCHHH----------------HHHHHHhcC-CCCCceEEEecCeecCCCCc-----------------
Q 022085 41 VNSPVTVCGDIHGQFHD----------------LMKLFQTGG-HVPETNYIFMGDFVDRGYNS----------------- 86 (303)
Q Consensus 41 ~~~~i~viGDIHG~~~~----------------l~~ll~~~~-~~~~~~~vfLGD~VDRG~~s----------------- 86 (303)
+..+|+-..|+||++.. +..++++.. ..++..+|-.||.+-.-+.+
T Consensus 38 ~~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGspl~~~~~~~~~~~~~~~~~~ 117 (780)
T PRK09418 38 VNLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGTPLGDYVANKINDPKKPVDPS 117 (780)
T ss_pred eEEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCchHHHHHhhcccccccccccc
Confidence 35679999999999632 223333332 12345677799988544332
Q ss_pred --HHHHHHHHHhhhhCCCeEEEEcCCchh
Q 022085 87 --LEVFTILLLLKARYPANITLLRGNHES 113 (303)
Q Consensus 87 --~evl~~l~~lk~~~P~~v~~lrGNHE~ 113 (303)
..++.++-.|... ....||||.
T Consensus 118 ~~~p~i~~mN~lgyD-----a~tlGNHEF 141 (780)
T PRK09418 118 YTHPLYRLMNLMKYD-----VISLGNHEF 141 (780)
T ss_pred cchHHHHHHhccCCC-----EEecccccc
Confidence 2355555555543 477899994
No 132
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=55.58 E-value=7.4 Score=35.96 Aligned_cols=68 Identities=26% Similarity=0.326 Sum_probs=42.5
Q ss_pred CCcceeecC--CCCHHHHHHHHHhcCC---CCCceEEEecCe-ecCCCCcH------HHHHHHH---HhhhhCCCeEEEE
Q 022085 43 SPVTVCGDI--HGQFHDLMKLFQTGGH---VPETNYIFMGDF-VDRGYNSL------EVFTILL---LLKARYPANITLL 107 (303)
Q Consensus 43 ~~i~viGDI--HG~~~~l~~ll~~~~~---~~~~~~vfLGD~-VDRG~~s~------evl~~l~---~lk~~~P~~v~~l 107 (303)
-++.||||- +|.+..-+..++.... ..-+-+|-+||= -|-|..+. +..+-++ .|+. ..+.+
T Consensus 44 lsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pSLQk----pWy~v 119 (336)
T KOG2679|consen 44 LSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPSLQK----PWYSV 119 (336)
T ss_pred eEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhhhhhcccCccccc----chhhh
Confidence 479999994 7888776666554222 234667889994 46676542 2222222 2222 37899
Q ss_pred cCCchhh
Q 022085 108 RGNHESR 114 (303)
Q Consensus 108 rGNHE~~ 114 (303)
.||||.+
T Consensus 120 lGNHDyr 126 (336)
T KOG2679|consen 120 LGNHDYR 126 (336)
T ss_pred ccCcccc
Confidence 9999986
No 133
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=55.38 E-value=32 Score=25.50 Aligned_cols=69 Identities=16% Similarity=0.080 Sum_probs=47.4
Q ss_pred CCcceeecCCCCHHHHHHHHHhcC--CCCCceEEEecCeecCCCCcHHHHHHHHHhhhhCCCeEEEEcCCc
Q 022085 43 SPVTVCGDIHGQFHDLMKLFQTGG--HVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNH 111 (303)
Q Consensus 43 ~~i~viGDIHG~~~~l~~ll~~~~--~~~~~~~vfLGD~VDRG~~s~evl~~l~~lk~~~P~~v~~lrGNH 111 (303)
..+.+|=|---+.+.+.++++.+. .+....++.+|+.-|+|..+.+....+..+...+...+++...|+
T Consensus 12 ~~~~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~~ 82 (91)
T PF02875_consen 12 NGPTVIDDYAHNPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDNP 82 (91)
T ss_dssp TTEEEEEET--SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSBT
T ss_pred CCcEEEEECCCCHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCCC
Confidence 356778887678888888887764 245677888999999888888876777777666666655555543
No 134
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=44.83 E-value=18 Score=37.05 Aligned_cols=41 Identities=22% Similarity=0.400 Sum_probs=34.5
Q ss_pred ceEEEecCeecCCCCcHHHHHHHHHhhhhCCCeEEEEcCCchhhhh
Q 022085 71 TNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQL 116 (303)
Q Consensus 71 ~~~vfLGD~VDRG~~s~evl~~l~~lk~~~P~~v~~lrGNHE~~~~ 116 (303)
|++-.+||+.||||.+-.+++.|+... +|=+--||||--.|
T Consensus 186 DhLHIvGDIyDRGp~pd~ImD~Lm~~h-----svDIQWGNHDIlWM 226 (640)
T PF06874_consen 186 DHLHIVGDIYDRGPRPDKIMDRLMNYH-----SVDIQWGNHDILWM 226 (640)
T ss_pred hheeecccccCCCCChhHHHHHHhcCC-----CccccccchHHHHH
Confidence 568899999999999999999998543 47788999998644
No 135
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=42.59 E-value=19 Score=33.15 Aligned_cols=39 Identities=28% Similarity=0.536 Sum_probs=26.2
Q ss_pred eEEEecCeecCCCCcHH-HHHHHHHhhhhCCCeEEEEcCCchhh
Q 022085 72 NYIFMGDFVDRGYNSLE-VFTILLLLKARYPANITLLRGNHESR 114 (303)
Q Consensus 72 ~~vfLGD~VDRG~~s~e-vl~~l~~lk~~~P~~v~~lrGNHE~~ 114 (303)
+++|+||+|.+ ...+ +-..|-.+|.+++..+++. |=|..
T Consensus 2 ~ilfiGDi~G~--~Gr~~l~~~L~~lk~~~~~D~vIa--NgEn~ 41 (266)
T TIGR00282 2 KFLFIGDVYGK--AGRKIVKNNLPQLKSKYQADLVIA--NGENT 41 (266)
T ss_pred eEEEEEecCCH--HHHHHHHHHHHHHHHhCCCCEEEE--cCccc
Confidence 68999999954 3344 3356777888887655554 55554
No 136
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=38.98 E-value=1.5e+02 Score=24.96 Aligned_cols=58 Identities=21% Similarity=0.383 Sum_probs=39.9
Q ss_pred ceeecCCCCHHHHHHHH-HhcCC------------CCCceEEEecCeecCCCCcHHHHHHHHHhhhhCCCeEEE
Q 022085 46 TVCGDIHGQFHDLMKLF-QTGGH------------VPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITL 106 (303)
Q Consensus 46 ~viGDIHG~~~~l~~ll-~~~~~------------~~~~~~vfLGD~VDRG~~s~evl~~l~~lk~~~P~~v~~ 106 (303)
++.+=.+||-..+.+.+ +.++. ..+..+||+|=.+|+|..+-++..+|..|+- .+|++
T Consensus 2 IvYsS~TGNTkkvA~aI~~~l~~~~~~~~~~~~~~~~~yD~i~lG~w~d~G~~d~~~~~fl~~l~~---KkV~l 72 (160)
T PF12641_consen 2 IVYSSRTGNTKKVAEAIAEALGAKDIVSVEEPPEDLEDYDLIFLGFWIDKGTPDKDMKEFLKKLKG---KKVAL 72 (160)
T ss_pred EEEECCCChHHHHHHHHHHHCCCceeEeccccccCCCCCCEEEEEcCccCCCCCHHHHHHHHHccC---CeEEE
Confidence 44555677776665443 22222 2346799999999999999999999988763 34544
No 137
>PF14164 YqzH: YqzH-like protein
Probab=38.67 E-value=73 Score=22.75 Aligned_cols=36 Identities=22% Similarity=0.350 Sum_probs=28.9
Q ss_pred HHHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHhhCCCc
Q 022085 3 LDQWIAKVKEG-------QHLLEDELQLLCEYVKEILIEESNV 38 (303)
Q Consensus 3 ~~~~~~~~~~~-------~~~~~~~~~~l~~~~~~i~~~ep~l 38 (303)
|++|+.+.+++ .++++.|...|+..+...-.++|..
T Consensus 6 I~Kmi~~~l~QYg~d~~~~pls~~E~~~L~~~i~~~~~~~~~~ 48 (64)
T PF14164_consen 6 IEKMIINCLRQYGYDVECMPLSDEEWEELCKHIQERKNEEPDE 48 (64)
T ss_pred HHHHHHHHHHHhCCcccCCCCCHHHHHHHHHHHHHHHhcCCCc
Confidence 56666666643 3799999999999999999999863
No 138
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=36.30 E-value=1.6e+02 Score=26.72 Aligned_cols=87 Identities=25% Similarity=0.369 Sum_probs=44.6
Q ss_pred ceEEEecCee-cCCCC---cHHHHHHHHHhhhh-------CCCeEEEEcCCchhhhhhhccCChHHHHH--HhCCchhhh
Q 022085 71 TNYIFMGDFV-DRGYN---SLEVFTILLLLKAR-------YPANITLLRGNHESRQLTQVYGFYDECQR--KYGNANAWR 137 (303)
Q Consensus 71 ~~~vfLGD~V-DRG~~---s~evl~~l~~lk~~-------~P~~v~~lrGNHE~~~~~~~~gf~~e~~~--~~~~~~~~~ 137 (303)
+..+||||-. ||-.. ..-++.+|-++... --++|++|-||||.-. +..| ..-.. +....+.|
T Consensus 86 tpciflgdhtgdrfsti~gd~yiltllnsm~nme~nkdsrinknvvvlagnhein~-ngny---~arlanhkls~gDTY- 160 (318)
T PF13258_consen 86 TPCIFLGDHTGDRFSTIFGDQYILTLLNSMRNMEGNKDSRINKNVVVLAGNHEINF-NGNY---MARLANHKLSAGDTY- 160 (318)
T ss_pred ccceeecCcccchhhhhcchHHHHHHHHHHHhcccccccccccceEEEecCceecc-CchH---HHHHhhCCCCccchh-
Confidence 4567777753 33111 12245555554431 2348999999999742 2221 11111 11111222
Q ss_pred hhhHHHhcccceeEE-eceEEEEcCCCCC
Q 022085 138 YCTDVFDYLTLSAII-DGTVLCVHGGLSP 165 (303)
Q Consensus 138 ~~~~~f~~LP~~~~i-~~~~l~vHgGi~p 165 (303)
..+..+|.+..- ..+++-.|-||-.
T Consensus 161 ---nlIKtldVC~YD~erkvltsHHGIir 186 (318)
T PF13258_consen 161 ---NLIKTLDVCNYDPERKVLTSHHGIIR 186 (318)
T ss_pred ---hccccccccccCcchhhhhcccCcee
Confidence 356777776432 3468888888854
No 139
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=34.74 E-value=58 Score=28.91 Aligned_cols=38 Identities=18% Similarity=0.230 Sum_probs=28.4
Q ss_pred hhhhhCCceEEEecccccccceeEEeCCCeEEEEEcCCCCC
Q 022085 220 EFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYC 260 (303)
Q Consensus 220 ~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~~itifSa~~y~ 260 (303)
+.+-..|++.||-||..+..+++. . ++++| +||-=|+.
T Consensus 199 ~~l~~~G~DvIiG~H~H~~~~~e~-~-~~~~I-~YslGNfi 236 (239)
T smart00854 199 HALIDAGADVVIGHHPHVLQPIEI-Y-KGKLI-AYSLGNFI 236 (239)
T ss_pred HHHHHcCCCEEEcCCCCcCCceEE-E-CCEEE-EEcccccc
Confidence 333347999999999999999988 5 67655 67765553
No 140
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=34.36 E-value=34 Score=31.21 Aligned_cols=39 Identities=28% Similarity=0.396 Sum_probs=26.8
Q ss_pred eEEEecCeecCCCCcHHHHHHHHHhhhhCCCeEEEEcCCchh
Q 022085 72 NYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHES 113 (303)
Q Consensus 72 ~~vfLGD~VDRG~~s~evl~~l~~lk~~~P~~v~~lrGNHE~ 113 (303)
+++|+||+|.+.-. .-+-..|-++|.+++..+++. |=|.
T Consensus 1 ~ilfigdi~g~~G~-~~~~~~l~~lk~~~~~D~vi~--NgEn 39 (255)
T cd07382 1 KILFIGDIVGKPGR-KAVKEHLPKLKKEYKIDFVIA--NGEN 39 (255)
T ss_pred CEEEEEeCCCHHHH-HHHHHHHHHHHHHCCCCEEEE--CCcc
Confidence 58999999987432 245666888888887665555 4444
No 141
>PRK10773 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed
Probab=33.89 E-value=1.2e+02 Score=29.73 Aligned_cols=67 Identities=12% Similarity=0.082 Sum_probs=47.8
Q ss_pred CCCcceeecCCC-CHHHHHHHHHhcCCCCCceEEEecCeecCCCCcHHHHHHHHHhhhhC-CCeEEEEcC
Q 022085 42 NSPVTVCGDIHG-QFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARY-PANITLLRG 109 (303)
Q Consensus 42 ~~~i~viGDIHG-~~~~l~~ll~~~~~~~~~~~vfLGD~VDRG~~s~evl~~l~~lk~~~-P~~v~~lrG 109 (303)
...+.+|=|-+. +.+.+.+.|+.+...+..+++.+||+...|+.+.+.-.-+..+-... .+.++++ |
T Consensus 324 ~~g~~iIDDsYn~nP~s~~aaL~~l~~~~~r~i~VlG~m~elG~~~~~~h~~~~~~~~~~~~d~v~~~-G 392 (453)
T PRK10773 324 AEGQLLLDDSYNANVGSMTAAAQVLAEMPGYRVMVVGDMAELGAESEACHRQVGEAAKAAGIDKVLSV-G 392 (453)
T ss_pred CCCeEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEECChhhcchHHHHHHHHHHHHHHHcCCCEEEEE-C
Confidence 345788889655 57888888877654445679999999999999988877666554433 3445444 6
No 142
>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=32.44 E-value=3.3e+02 Score=23.51 Aligned_cols=75 Identities=16% Similarity=0.239 Sum_probs=53.8
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCccccCCCcceeecCCCCHHHHHHHHHhcCCCC-------------------------
Q 022085 15 HLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVP------------------------- 69 (303)
Q Consensus 15 ~~~~~~~~~l~~~~~~i~~~ep~ll~~~~~i~viGDIHG~~~~l~~ll~~~~~~~------------------------- 69 (303)
.++++++.+-+.+..+-+.++..= ...++||=++|++--+-.++..+..+.
T Consensus 11 Lisee~I~~ri~ela~~I~~~y~g----~~~~vv~iLkGs~~F~~dL~r~i~~~~e~dFm~vSSYg~~t~ssg~v~i~kD 86 (178)
T COG0634 11 LISEEQIKARIKELAAQITEDYGG----KDPLVVGVLKGSFPFMADLIRAIDFPLEVDFMHVSSYGGGTSSSGEVKILKD 86 (178)
T ss_pred eeCHHHHHHHHHHHHHHHHHhhCC----CceEEEEEcccchhhHHHHHHhcCCCceeEEEEEeccCCCcccCCceEEecc
Confidence 589999999988877776655322 678899999999877777766554221
Q ss_pred ------CceEEEecCeecCCCCcHHHHHHH
Q 022085 70 ------ETNYIFMGDFVDRGYNSLEVFTIL 93 (303)
Q Consensus 70 ------~~~~vfLGD~VDRG~~s~evl~~l 93 (303)
...++.+=|++|-|.--..+.++|
T Consensus 87 ld~di~grdVLiVeDIiDsG~TLs~i~~~l 116 (178)
T COG0634 87 LDEDIKGRDVLIVEDIIDSGLTLSKVRDLL 116 (178)
T ss_pred cccCCCCCeEEEEecccccChhHHHHHHHH
Confidence 246888999999886444455544
No 143
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=30.42 E-value=47 Score=33.06 Aligned_cols=68 Identities=15% Similarity=0.216 Sum_probs=41.6
Q ss_pred chhhhhhhhCCce----EEEecccccc--cceeEEeCCCeEEEE---EcCCCCCccCCCcEEEEEEeCCCceEEEEeec
Q 022085 216 RVTSEFNHINNLD----LVCRAHQLVQ--EGLKYMFQDKGLVTV---WSAPNYCYRCGNVASILSFNENMEREVKFFTE 285 (303)
Q Consensus 216 ~~~~~fl~~~~~~----~iIrgH~~~~--~G~~~~~~~~~~iti---fSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~ 285 (303)
+...+.|+..|++ .||.||+|+. +|-...-+||++|-| ||-. |....+ -|+.-.+-.+..++.+.-+|
T Consensus 516 ~ic~kil~eFGLdpe~ghiINGHtPVke~~GE~PIKAngKliVIDGGFskA-Yqs~Tg-iAGYTllYNSfGmqLvsHq~ 592 (648)
T COG3855 516 EICRKILEEFGLDPEGGHIINGHTPVKEKNGENPIKANGKLIVIDGGFSKA-YQSTTG-IAGYTLLYNSFGMQLVSHQP 592 (648)
T ss_pred HHHHHHHHHhCCCcccCceecCCCcccccCCCCCccCCCeEEEEcCchhhh-hhcccc-cceeEeeecchhhhHhhcCc
Confidence 4566778888887 8999999986 454444469999988 5543 443333 34443343344444444333
No 144
>KOG3425 consensus Uncharacterized conserved protein [Function unknown]
Probab=30.29 E-value=1.9e+02 Score=23.49 Aligned_cols=60 Identities=12% Similarity=0.159 Sum_probs=38.8
Q ss_pred HHHHHHHHHhcCCCCCceEEEecCeecCCCCc-----HHHHHHHHHhhhhCCCeEEEE---cCCchhh
Q 022085 55 FHDLMKLFQTGGHVPETNYIFMGDFVDRGYNS-----LEVFTILLLLKARYPANITLL---RGNHESR 114 (303)
Q Consensus 55 ~~~l~~ll~~~~~~~~~~~vfLGD~VDRG~~s-----~evl~~l~~lk~~~P~~v~~l---rGNHE~~ 114 (303)
++.|++.++..+....--++|+|+-.|++.+| +.....+..--..+|..++++ -||-+..
T Consensus 12 ~e~~~~~~~~~~n~~~ifvlF~gskd~~tGqSWCPdCV~AEPvi~~alk~ap~~~~~v~v~VG~rp~W 79 (128)
T KOG3425|consen 12 YESFEETLKNVENGKTIFVLFLGSKDDTTGQSWCPDCVAAEPVINEALKHAPEDVHFVHVYVGNRPYW 79 (128)
T ss_pred HHHHHHHHHHHhCCceEEEEEecccCCCCCCcCCchHHHhhHHHHHHHHhCCCceEEEEEEecCCCcc
Confidence 56788888877666666788999999987665 333333333222677766655 4776654
No 145
>TIGR00550 nadA quinolinate synthetase complex, A subunit. This protein, termed NadA, plays a role in the synthesis of pyridine, a precursor to NAD. The quinolinate synthetase complex consists of A protein (this protein) and B protein. B protein converts L-aspartate to iminoaspartate, an unstable reaction product which in the absence of A protein is spontaneously hydrolyzed to form oxaloacetate. The A protein, NadA, converts iminoaspartate to quinolate.
Probab=25.56 E-value=1.2e+02 Score=28.56 Aligned_cols=35 Identities=14% Similarity=0.227 Sum_probs=28.9
Q ss_pred CCCcceeecCCCCHHHHHHHHHhcCCCCCceEEEecCe
Q 022085 42 NSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDF 79 (303)
Q Consensus 42 ~~~i~viGDIHG~~~~l~~ll~~~~~~~~~~~vfLGD~ 79 (303)
+..+..+.|+=|+-..|.++.+.. +.+.+||+||.
T Consensus 28 ~~Evk~~aD~~gdS~~l~~~a~~~---~~~~IvF~gv~ 62 (310)
T TIGR00550 28 KDEIQQIADYTGDSLELAQIAAKT---DADIIVFCGVH 62 (310)
T ss_pred CHHHHHhhcceeeHHHHHHHHHhC---CCCEEEEeCCc
Confidence 456889999999988888887764 67889999995
No 146
>cd01533 4RHOD_Repeat_2 Member of the Rhodanese Homology Domain superfamily, repeat 2. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 2nd repeat which does contain the putative catalytic Cys residue.
Probab=24.12 E-value=3.2e+02 Score=20.57 Aligned_cols=87 Identities=17% Similarity=0.065 Sum_probs=46.6
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhCCCccccCCC-----cceeecCCCCHHHHHHHHHhcCCCCCceEEEecCeecCCCCcH
Q 022085 13 GQHLLEDELQLLCEYVKEILIEESNVQPVNSP-----VTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSL 87 (303)
Q Consensus 13 ~~~~~~~~~~~l~~~~~~i~~~ep~ll~~~~~-----i~viGDIHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDRG~~s~ 87 (303)
...++.+++.+++++. ....++++..+ -.+-|=+|=-+..+...+..++..+...+|+. +..|..|.
T Consensus 9 ~~~i~~~~l~~~~~~~-----~~~~liDvR~~~e~~~ghIpgainip~~~l~~~~~~l~~~~~~~ivv~---C~~G~rs~ 80 (109)
T cd01533 9 TPSVSADELAALQARG-----APLVVLDGRRFDEYRKMTIPGSVSCPGAELVLRVGELAPDPRTPIVVN---CAGRTRSI 80 (109)
T ss_pred CCcCCHHHHHHHHhcC-----CCcEEEeCCCHHHHhcCcCCCceeCCHHHHHHHHHhcCCCCCCeEEEE---CCCCchHH
Confidence 3457777777665431 12245666432 22334444456666666665554444556654 45677776
Q ss_pred HHHHHHHHhhhhCCCeEEEEcC
Q 022085 88 EVFTILLLLKARYPANITLLRG 109 (303)
Q Consensus 88 evl~~l~~lk~~~P~~v~~lrG 109 (303)
.....|..+. |++.++.|.|
T Consensus 81 ~a~~~L~~~G--~~~~v~~l~g 100 (109)
T cd01533 81 IGAQSLINAG--LPNPVAALRN 100 (109)
T ss_pred HHHHHHHHCC--CCcceeEecC
Confidence 6666555443 3322666665
No 147
>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]
Probab=23.32 E-value=1.7e+02 Score=29.90 Aligned_cols=61 Identities=21% Similarity=0.204 Sum_probs=38.0
Q ss_pred HHHHHHHhcCCC--CCceEEEecCee--cCCCCcHH----HHHHHHHh-hhhCCC-eEEEEcCCchhhhhh
Q 022085 57 DLMKLFQTGGHV--PETNYIFMGDFV--DRGYNSLE----VFTILLLL-KARYPA-NITLLRGNHESRQLT 117 (303)
Q Consensus 57 ~l~~ll~~~~~~--~~~~~vfLGD~V--DRG~~s~e----vl~~l~~l-k~~~P~-~v~~lrGNHE~~~~~ 117 (303)
.+..+|+.++.. .-|-++-.||++ |+++.+.+ ++..+..+ ..-+|+ -|+...||||-.-.+
T Consensus 196 lies~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N 266 (577)
T KOG3770|consen 196 LIESALDHIKENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVN 266 (577)
T ss_pred HHHHHHHHHHhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHh
Confidence 345555555432 246788899998 56666544 33333333 333565 689999999987665
No 148
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=22.81 E-value=85 Score=27.73 Aligned_cols=30 Identities=17% Similarity=0.090 Sum_probs=26.1
Q ss_pred eeCcchhhhhhhhCCceEEEecccccccce
Q 022085 212 LFGSRVTSEFNHINNLDLVCRAHQLVQEGL 241 (303)
Q Consensus 212 ~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~ 241 (303)
.+|...+.+++++.+++++|.||.....+.
T Consensus 195 ~~~s~~l~~li~~~~v~~~i~GH~H~~~~~ 224 (239)
T TIGR03729 195 FLGSQHFGQLLVKYEIKDVIFGHLHRRFGP 224 (239)
T ss_pred ccChHHHHHHHHHhCCCEEEECCccCCCCC
Confidence 578888999999999999999999987643
No 149
>PF03494 Beta-APP: Beta-amyloid peptide (beta-APP); InterPro: IPR013803 Amyloid-beta precursor protein (APP, or A4) is associated with Alzheimer's disease (AD), because one of its breakdown products, amyloid-beta (A-beta), aggregates to form amyloid or senile plaques [, ]. Mutations in APP or in proteins that process APP have been linked with early-onset, familial AD. Individuals with Down's syndrome carry an extra copy of chromosome 21, which contains the APP gene, and almost invariably develop amyloid plaques and Alzheimer's symptoms. APP is important for the neurogenesis and neuronal regeneration, either through the intact protein, or through its many breakdown products []. APP consists of a large N-terminal extracellular region containing heparin-binding and copper-binding sites, a short hydrophobic transmembrane domain, and a short C-terminal intracellular domain. The N-terminal region is similar in structure to cysteine-rich growth factors and appears to function as a cell surface receptor, contributing to neurite growth, neuronal adhesion, axonogenesis and cell mobility []. APP acts as a kinesin I membrane receptor to mediate the axonal transport of beta-secretase and presenilin 1. The N-terminal domain can regulate neurite outgrowth through its binding to heparin and collagen I and IV, which are components of the extracellular matrix. APP is also coupled to apoptosis-inducing pathways, and is involved in copper homeostasis/oxidative stress through copper ion reduction, where copper-metallated APP induces neuronal death []. The C-terminal intracellular domain appears to be involved in transcription regulation through protein-protein interactions. APP can promote transcription activation through binding to APBB1/Tip60, and may bind to the adaptor protein FE65 to transactivate a wide variety of different promoters. APP can be processed by different sets of enzymes: In the non-amyloidogenic (non-plaque-forming) pathway, APP is cleaved by alpha-secretase to yield a soluble N-terminal sAPP-alpha (neuroprotective) and a membrane-bound CTF-alpha. CTF-alpha is broken-down by presenilin-containing gamma-secretase to yield soluble p3 and membrane-bound AICD (nuclear signalling). In the amyloidogenic pathway (plaque-forming), APP is broken down by beta-secretase to yield soluble sAPP-beta and membrane-bound CTF-beta. CTF-beta is broken down by gamma-secretase to yield soluble amyloid-beta and membrane-bound AICD. Amyloid-beta is required for neuronal function, but can aggregate to form amyloid plaques that seem to disrupt brain cells by clogging points of cell-cell contact. This entry represents the amyloid-beta peptide (A-beta), which originates as a breakdown product from the cleavage of amyloid-beta precursor protein (APP, or A4), an integral, glycosylated membrane brain protein. More information about these protein can be found at Protein of the Month: Amyloid-beta Precursor Protein [].; GO: 0005488 binding, 0016021 integral to membrane; PDB: 2LMQ_F 3JTI_B 2LMO_B 3MOQ_D 2LNQ_E 2LMP_G 2BEG_B 1AMC_A 3OW9_B 3U0T_F ....
Probab=22.76 E-value=68 Score=20.09 Aligned_cols=29 Identities=24% Similarity=0.338 Sum_probs=18.9
Q ss_pred ccceeEEeCCCeEEEEEcCCCCCccCCCcEEEEEEe
Q 022085 238 QEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFN 273 (303)
Q Consensus 238 ~~G~~~~~~~~~~itifSa~~y~~~~~N~~avl~i~ 273 (303)
..||+.++ .|+ +|-|-+ ..+|+||++-+-
T Consensus 4 ~a~yeV~~--~kl--vf~aED---vgSNKGAIIGLM 32 (39)
T PF03494_consen 4 NAGYEVYH--KKL--VFLAED---VGSNKGAIIGLM 32 (39)
T ss_dssp CCCCCCCC--CCC--CCCCCC---CSSSSSEEEEEE
T ss_pred ccCcEEEe--eEE--EEEhhH---cCCCCceEEEEE
Confidence 46888854 443 455654 468999998553
No 150
>PF15007 CEP44: Centrosomal spindle body, CEP44
Probab=22.22 E-value=55 Score=26.80 Aligned_cols=20 Identities=15% Similarity=0.222 Sum_probs=18.6
Q ss_pred cCCCCHHHHHHHHHhcCCCC
Q 022085 50 DIHGQFHDLMKLFQTGGHVP 69 (303)
Q Consensus 50 DIHG~~~~l~~ll~~~~~~~ 69 (303)
|+.|++..|++.|+.+++|.
T Consensus 1 Dl~~~l~~L~~~Lr~~~yp~ 20 (131)
T PF15007_consen 1 DLKGNLRRLEQELRSLKYPD 20 (131)
T ss_pred ChhhHHHHHHHHHHHCCCCC
Confidence 89999999999999999984
No 151
>smart00411 BHL bacterial (prokaryotic) histone like domain.
Probab=21.58 E-value=1.5e+02 Score=21.66 Aligned_cols=33 Identities=18% Similarity=0.235 Sum_probs=25.5
Q ss_pred CCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHh
Q 022085 1 MDLDQWIAKVKEGQHLLEDELQLLCEYVKEILI 33 (303)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~ 33 (303)
|+..++++.+.....++..++..+++...+++.
T Consensus 1 mtk~eli~~ia~~~~~~~~~v~~vl~~l~~~i~ 33 (90)
T smart00411 1 MTKSELIDAIAEKAGLSKKDAKAAVDAFLEIIT 33 (90)
T ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Confidence 456778888887778888888888887766654
No 152
>PF02885 Glycos_trans_3N: Glycosyl transferase family, helical bundle domain Prosite entry for Thymidine and pyrimidine-nucleoside phosphorylases; InterPro: IPR017459 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. The glycosyl transferase family includes anthranilate phosphoribosyltransferase (TrpD, 2.4.2.18 from EC) and thymidine phosphorylase (2.4.2.2 from EC). All these proteins can transfer a phosphorylated ribose substrate. Thymidine phosphorylase (2.4.2.2 from EC) catalyses the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate. This enzyme regulates the availability of thymidine and is therefore essential to nucleic acid metabolism. This N-terminal domain is found in various family 3 glycosyl transferases, including anthranilate phosphoribosyltransferase (TrpD, 2.4.2.18 from EC) and thymidine phosphorylase (2.4.2.2 from EC). All these proteins can transfer a phosphorylated ribose substrate. Thymidine phosphorylase catalyses the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate. This enzyme regulates the availability of thymidine and is therefore essential to nucleic acid metabolism.; PDB: 2DSJ_B 2ELC_B 2BPQ_A 1ZVW_B 3QR9_B 1V8G_B 2WK5_C 2J0F_C 2WK6_B 1UOU_A ....
Probab=21.36 E-value=1.4e+02 Score=20.89 Aligned_cols=26 Identities=15% Similarity=0.437 Sum_probs=18.4
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHH
Q 022085 3 LDQWIAKVKEGQHLLEDELQLLCEYV 28 (303)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~l~~~~ 28 (303)
+..+++++.++..++.+++.++++..
T Consensus 2 ~~~~l~~l~~g~~Ls~~e~~~~~~~i 27 (66)
T PF02885_consen 2 IKEILKKLRDGEDLSREEAKAAFDAI 27 (66)
T ss_dssp HHHHHHHHHTT----HHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCHHHHHHHHHHH
Confidence 56789999999999999998888765
No 153
>TIGR01143 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase. This family consists of the strictly bacterial MurF gene of peptidoglycan biosynthesis. This enzyme is almost always UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase, but in a few species, MurE adds lysine rather than diaminopimelate. This enzyme acts on the product from MurE activity, and so is also subfamily rather than equivalog. Staphylococcus aureus is an example of species in this MurF protein would differ.
Probab=21.34 E-value=3.6e+02 Score=25.94 Aligned_cols=69 Identities=14% Similarity=0.179 Sum_probs=45.9
Q ss_pred CCCcceeecCC-CCHHHHHHHHHhcCCCCCceEEEecCeecCCCCcHHHHHHHHHhhhhCC-CeEEEEcCCc
Q 022085 42 NSPVTVCGDIH-GQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYP-ANITLLRGNH 111 (303)
Q Consensus 42 ~~~i~viGDIH-G~~~~l~~ll~~~~~~~~~~~vfLGD~VDRG~~s~evl~~l~~lk~~~P-~~v~~lrGNH 111 (303)
...+.+|=|-+ -+.+.+.+.|+.+...+..+++.+|++-.-|..+.+.-..+...-..+. +.+++ -|.+
T Consensus 295 ~~~~~vidDsya~np~s~~~al~~l~~~~~r~i~VlG~~~e~G~~~~~~~~~l~~~~~~~~~d~vi~-~g~~ 365 (417)
T TIGR01143 295 KNGLTLIDDTYNANPDSMRAALDALARFPGKKILVLGDMAELGEYSEELHAEVGRYANSLGIDLVFL-VGEE 365 (417)
T ss_pred CCCcEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEEcCchhcChHHHHHHHHHHHHHHHcCCCEEEE-ECHH
Confidence 34578888855 4888898888876543346788899998888887766555554443443 44444 4543
No 154
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=21.00 E-value=1.4e+02 Score=27.30 Aligned_cols=12 Identities=25% Similarity=0.318 Sum_probs=5.9
Q ss_pred ceEEEecccccc
Q 022085 227 LDLVCRAHQLVQ 238 (303)
Q Consensus 227 ~~~iIrgH~~~~ 238 (303)
+..+|-.|+.++
T Consensus 169 vsavvGTHTHV~ 180 (266)
T COG1692 169 VSAVVGTHTHVP 180 (266)
T ss_pred EEEEEeccCccc
Confidence 345555555543
No 155
>PRK04531 acetylglutamate kinase; Provisional
Probab=20.82 E-value=1.4e+02 Score=29.04 Aligned_cols=23 Identities=22% Similarity=0.215 Sum_probs=13.3
Q ss_pred HHHhcccceeEEeceEEEEcCCC
Q 022085 141 DVFDYLTLSAIIDGTVLCVHGGL 163 (303)
Q Consensus 141 ~~f~~LP~~~~i~~~~l~vHgGi 163 (303)
.+++.+-+-...+-+.+.||||=
T Consensus 54 ~l~~dla~L~~~G~~~VlVHGgg 76 (398)
T PRK04531 54 ALASSLSFLQEVGLTPIVVHGAG 76 (398)
T ss_pred HHHHHHHHHHHCCCcEEEEECCC
Confidence 33444433333466788999983
No 156
>TIGR01201 HU_rel DNA-binding protein, histone-like, putative. This model describes a set of proteins related to but longer than DNA-binding protein HU. Its distinctive domain architecture compared to HU and related histone-like DNA-binding proteins justifies the designation as superfamily. Members include, so far, one from Bacteroides fragilis, a gut bacterium, and ten from Porphyromonas gingivalis, an oral anaerobe.
Probab=20.43 E-value=1.5e+02 Score=24.48 Aligned_cols=32 Identities=13% Similarity=0.221 Sum_probs=18.7
Q ss_pred CHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHh
Q 022085 2 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILI 33 (303)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~ 33 (303)
+.+++++.+.+...+++.++..+++...+++.
T Consensus 32 t~~el~~~Ia~~s~~s~~dv~~vl~~l~~~i~ 63 (145)
T TIGR01201 32 DFEEIAELIAEESSLSPGDVKGIIDRLAYVLR 63 (145)
T ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Confidence 45566666665555666666666665555443
No 157
>COG0148 Eno Enolase [Carbohydrate transport and metabolism]
Probab=20.33 E-value=5.4e+02 Score=25.23 Aligned_cols=93 Identities=19% Similarity=0.225 Sum_probs=64.4
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCccccCCCcceeecCCCC-------HHHHH---HHHHhcCCCCC--------------
Q 022085 15 HLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQ-------FHDLM---KLFQTGGHVPE-------------- 70 (303)
Q Consensus 15 ~~~~~~~~~l~~~~~~i~~~ep~ll~~~~~i~viGDIHG~-------~~~l~---~ll~~~~~~~~-------------- 70 (303)
+.....+.+.+....+++..-..++........|||==|- -.+|. +..+.+|+.+.
T Consensus 168 p~ga~sf~ealr~~~ev~h~lk~~l~~~g~~t~vGDEGgfAP~l~~~eeald~i~~Aie~agy~~g~~i~~alD~Aasef 247 (423)
T COG0148 168 PVGAESFKEALRAGAEVFHHLKKLLKEKGLSTGVGDEGGFAPNLKSNEEALDILVEAIEEAGYEPGEDIALALDVAASEF 247 (423)
T ss_pred ecChHHHHHHHHHHHHHHHHHHHHHhhcCccccccCCcccCCCCCccHHHHHHHHHHHHHhCCCCCcceeeeehhhhhhh
Confidence 3567888999999999999998898888888889996663 33333 44456665542
Q ss_pred ---ceEEEecCeecCCCCcHHHHHHHHHhhhhCCCeEE-EEcCCchh
Q 022085 71 ---TNYIFMGDFVDRGYNSLEVFTILLLLKARYPANIT-LLRGNHES 113 (303)
Q Consensus 71 ---~~~vfLGD~VDRG~~s~evl~~l~~lk~~~P~~v~-~lrGNHE~ 113 (303)
.+|++=|. ...+-|.++++..|..+|| ++ +--|=||.
T Consensus 248 y~~~~Y~~~~~----~~~~~e~i~~~~~Lv~~Yp--ivsiEDpl~E~ 288 (423)
T COG0148 248 YKDGKYVLEGE----SLTSEELIEYYLELVKKYP--IVSIEDPLSED 288 (423)
T ss_pred ccCCeeeecCc----ccCHHHHHHHHHHHHHhCC--EEEEcCCCCch
Confidence 22444443 3567899999999999999 44 43444443
Done!