BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022087
(303 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54GB2|CTSL2_DICDI CTD small phosphatase-like protein 2 OS=Dictyostelium discoideum
GN=ctdspl2 PE=3 SV=1
Length = 567
Score = 209 bits (531), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 103/202 (50%), Positives = 139/202 (68%), Gaps = 3/202 (1%)
Query: 98 FDPQFFIKYLPELSDIANFRPTASPKETQGRKSVTLVLDLDETLVHSTLEYCDDADFTFT 157
F+P FIK L + + P A P + ++LVLDLDETLVH + E + TF
Sbjct: 360 FNPFLFIKQLANATTMP--PPVALPPKEHSSPKISLVLDLDETLVHCSTEPLEQPHLTFP 417
Query: 158 VFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRV 217
VFFN E+ V+ K+RP + FL +V+++FEV+IFTASQ +YA +LL+++DP+ K I R+
Sbjct: 418 VFFNNTEYQVFAKKRPFFEEFLHKVSDIFEVIIFTASQEVYANKLLNMIDPNNK-IKYRL 476
Query: 218 YRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSLIS 277
YR+SC++ DG Y KDL+VLG DL +V IIDNSPQ F QV+NGIPIESWF+D +D L+
Sbjct: 477 YRDSCVYVDGNYLKDLSVLGRDLKQVVIIDNSPQSFGFQVDNGIPIESWFEDENDKELLQ 536
Query: 278 LLPFLDILADAEDVRPIIAKTF 299
L+PFL+ L + EDVRP I F
Sbjct: 537 LVPFLESLTNVEDVRPHIRDKF 558
>sp|A4QNX6|CTL2B_DANRE CTD small phosphatase-like protein 2-B OS=Danio rerio GN=ctdspl2b
PE=2 SV=1
Length = 460
Score = 206 bits (524), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 101/203 (49%), Positives = 140/203 (68%), Gaps = 1/203 (0%)
Query: 98 FDPQFFIKYLPELSDIANFRPTASPKETQGRKSVTLVLDLDETLVHSTLEYCDDADFTFT 157
FDP FFIK++P L++ R A P +T+ +LVLDLDETLVH +L DDA TF
Sbjct: 249 FDPYFFIKHVPPLTEEQLTRKPALPLKTRSTPEFSLVLDLDETLVHCSLNELDDAALTFP 308
Query: 158 VFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRV 217
V F + VYV+ RP + FLER+++++E+++FTAS+ +YA +LL+ILDP +L+ R+
Sbjct: 309 VLFQDVIYQVYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPRKQLVRHRL 368
Query: 218 YRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSLIS 277
+RE C+ G Y KDL +LG DL+K IIDNSPQ F Q++NGIPIESWF D +D L+
Sbjct: 369 FREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDRNDSELLK 428
Query: 278 LLPFLDILADA-EDVRPIIAKTF 299
L+PFL+ L + EDVRP + + F
Sbjct: 429 LVPFLEKLVELNEDVRPHVRERF 451
>sp|Q05D32|CTSL2_HUMAN CTD small phosphatase-like protein 2 OS=Homo sapiens GN=CTDSPL2
PE=1 SV=2
Length = 466
Score = 206 bits (524), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 101/203 (49%), Positives = 139/203 (68%), Gaps = 1/203 (0%)
Query: 98 FDPQFFIKYLPELSDIANFRPTASPKETQGRKSVTLVLDLDETLVHSTLEYCDDADFTFT 157
FDP +FIK++P L++ R A P +T+ +LVLDLDETLVH +L +DA TF
Sbjct: 255 FDPYYFIKHVPPLTEEQLNRKPALPLKTRSTPEFSLVLDLDETLVHCSLNELEDAALTFP 314
Query: 158 VFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRV 217
V F + VYV+ RP + FLER+++M+E+++FTAS+ +YA +LL+ILDP +L+ R+
Sbjct: 315 VLFQDVIYQVYVRLRPFFREFLERMSQMYEIILFTASKKVYADKLLNILDPKKQLVRHRL 374
Query: 218 YRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSLIS 277
+RE C+ G Y KDL +LG DL+K IIDNSPQ F Q++NGIPIESWF D +D L+
Sbjct: 375 FREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDKNDNELLK 434
Query: 278 LLPFLDILAD-AEDVRPIIAKTF 299
L+PFL+ L + EDVRP I F
Sbjct: 435 LIPFLEKLVELNEDVRPHIRDRF 457
>sp|Q08BB5|CTL2A_DANRE CTD small phosphatase-like protein 2-A OS=Danio rerio GN=ctdspl2a
PE=2 SV=1
Length = 469
Score = 205 bits (522), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 101/203 (49%), Positives = 140/203 (68%), Gaps = 1/203 (0%)
Query: 98 FDPQFFIKYLPELSDIANFRPTASPKETQGRKSVTLVLDLDETLVHSTLEYCDDADFTFT 157
FDP FFIK++P L++ R A P +T+ +LVLDLDETLVH +L +DA TF
Sbjct: 258 FDPYFFIKHVPPLTEEQLTRKPALPLKTRSTPEFSLVLDLDETLVHCSLNELEDAALTFP 317
Query: 158 VFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRV 217
V F + VYV+ RP + FLER+++++E+++FTAS+ +YA +LL+ILDP +L+ R+
Sbjct: 318 VLFQDVIYQVYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPKKQLVRHRL 377
Query: 218 YRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSLIS 277
+RE C+ G Y KDL +LG DL+K IIDNSPQ F Q++NGIPIESWF D +D L+
Sbjct: 378 FREHCVCVQGNYIKDLNILGRDLSKTVIIDNSPQAFAYQLSNGIPIESWFVDKNDNELLK 437
Query: 278 LLPFLDILADA-EDVRPIIAKTF 299
L+PFL+ L + EDVRP I + F
Sbjct: 438 LVPFLEKLVELNEDVRPYIRERF 460
>sp|Q8BG15|CTSL2_MOUSE CTD small phosphatase-like protein 2 OS=Mus musculus GN=Ctdspl2
PE=1 SV=1
Length = 465
Score = 205 bits (522), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 101/203 (49%), Positives = 139/203 (68%), Gaps = 1/203 (0%)
Query: 98 FDPQFFIKYLPELSDIANFRPTASPKETQGRKSVTLVLDLDETLVHSTLEYCDDADFTFT 157
FDP +FIK++P L++ R A P +T+ +LVLDLDETLVH +L +DA TF
Sbjct: 254 FDPYYFIKHVPPLTEEQLNRKPALPLKTRSTPEFSLVLDLDETLVHCSLNELEDAALTFP 313
Query: 158 VFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRV 217
V F + VYV+ RP + FLER+++M+E+++FTAS+ +YA +LL+ILDP +L+ R+
Sbjct: 314 VLFQDVIYQVYVRLRPFFREFLERMSQMYEIILFTASKKVYADKLLNILDPKKQLVRHRL 373
Query: 218 YRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSLIS 277
+RE C+ G Y KDL +LG DL+K IIDNSPQ F Q++NGIPIESWF D +D L+
Sbjct: 374 FREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDKNDNELLK 433
Query: 278 LLPFLDILAD-AEDVRPIIAKTF 299
L+PFL+ L + EDVRP I F
Sbjct: 434 LIPFLEKLVELNEDVRPHIRDRF 456
>sp|Q5XIK8|CTSL2_RAT CTD small phosphatase-like protein 2 OS=Rattus norvegicus
GN=Ctdspl2 PE=2 SV=1
Length = 465
Score = 205 bits (522), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 101/203 (49%), Positives = 139/203 (68%), Gaps = 1/203 (0%)
Query: 98 FDPQFFIKYLPELSDIANFRPTASPKETQGRKSVTLVLDLDETLVHSTLEYCDDADFTFT 157
FDP +FIK++P L++ R A P +T+ +LVLDLDETLVH +L +DA TF
Sbjct: 254 FDPYYFIKHVPPLTEEQLNRKPALPLKTRSTPEFSLVLDLDETLVHCSLNELEDAALTFP 313
Query: 158 VFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRV 217
V F + VYV+ RP + FLER+++M+E+++FTAS+ +YA +LL+ILDP +L+ R+
Sbjct: 314 VLFQDVIYQVYVRLRPFFREFLERMSQMYEIILFTASKKVYADKLLNILDPKKQLVRHRL 373
Query: 218 YRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSLIS 277
+RE C+ G Y KDL +LG DL+K IIDNSPQ F Q++NGIPIESWF D +D L+
Sbjct: 374 FREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDKNDNELLK 433
Query: 278 LLPFLDILAD-AEDVRPIIAKTF 299
L+PFL+ L + EDVRP I F
Sbjct: 434 LIPFLEKLVELNEDVRPHIRDRF 456
>sp|Q5F3Z7|CTSL2_CHICK CTD small phosphatase-like protein 2 OS=Gallus gallus GN=CTDSPL2
PE=2 SV=2
Length = 466
Score = 204 bits (518), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 100/203 (49%), Positives = 139/203 (68%), Gaps = 1/203 (0%)
Query: 98 FDPQFFIKYLPELSDIANFRPTASPKETQGRKSVTLVLDLDETLVHSTLEYCDDADFTFT 157
FDP +FIK++P L++ R A P +T+ +LVLDLDETLVH +L +DA TF
Sbjct: 255 FDPYYFIKHVPPLTEEQLNRKPALPLKTRSTPEFSLVLDLDETLVHCSLNELEDAALTFP 314
Query: 158 VFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRV 217
V F + VYV+ RP + FLER+++++E+++FTAS+ +YA +LL+ILDP +L+ R+
Sbjct: 315 VLFQDVIYQVYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPKKQLVRHRL 374
Query: 218 YRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSLIS 277
+RE C+ G Y KDL +LG DL+K IIDNSPQ F Q++NGIPIESWF D +D L+
Sbjct: 375 FREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDKNDNELLK 434
Query: 278 LLPFLDILAD-AEDVRPIIAKTF 299
L+PFL+ L + EDVRP I F
Sbjct: 435 LIPFLEKLVELNEDVRPHIRDRF 457
>sp|Q801R4|CTL2A_XENLA CTD small phosphatase-like protein 2-A OS=Xenopus laevis
GN=ctdspl2-a PE=2 SV=1
Length = 466
Score = 203 bits (516), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 100/203 (49%), Positives = 139/203 (68%), Gaps = 1/203 (0%)
Query: 98 FDPQFFIKYLPELSDIANFRPTASPKETQGRKSVTLVLDLDETLVHSTLEYCDDADFTFT 157
FDP FFIK++P L++ R A P +T+ +LVLDLDETLVH +L +DA TF
Sbjct: 255 FDPYFFIKHVPPLTEEQLNRKPALPLKTRSTPEFSLVLDLDETLVHCSLNELEDAALTFP 314
Query: 158 VFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRV 217
V F + VYV+ RP + FLER+++++E+++FTAS+ +YA +LL+ILDP +L+ R+
Sbjct: 315 VLFQDVIYQVYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPKKRLVRHRL 374
Query: 218 YRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSLIS 277
+RE C+ G Y KDL +LG DL+K IIDNSPQ F Q++NGIPIESWF D +D L+
Sbjct: 375 FREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDKNDKELLK 434
Query: 278 LLPFLDILAD-AEDVRPIIAKTF 299
L+PFL+ L + EDVRP + F
Sbjct: 435 LVPFLENLVELNEDVRPHVRDRF 457
>sp|Q3KQB6|CTL2B_XENLA CTD small phosphatase-like protein 2-B OS=Xenopus laevis
GN=ctdspl2-b PE=2 SV=1
Length = 466
Score = 203 bits (516), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 101/203 (49%), Positives = 138/203 (67%), Gaps = 1/203 (0%)
Query: 98 FDPQFFIKYLPELSDIANFRPTASPKETQGRKSVTLVLDLDETLVHSTLEYCDDADFTFT 157
FDP FFIK++P L++ R A P +T+ +LVLDLDETLVH +L +DA TF
Sbjct: 255 FDPYFFIKHVPPLTEEQLNRKPALPLKTRSTPEFSLVLDLDETLVHCSLNELEDAALTFP 314
Query: 158 VFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRV 217
V F + VYV+ RP + FLER+++++E+++FTAS+ +YA +LL+ILDP +L+ R+
Sbjct: 315 VLFQDVIYQVYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPKKRLVRHRL 374
Query: 218 YRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSLIS 277
+RE C+ G Y KDL +LG DL+K IIDNSPQ F Q++NGIPIESWF D +D L+
Sbjct: 375 FREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDKNDKELLK 434
Query: 278 LLPFLDILAD-AEDVRPIIAKTF 299
L+PFL L + EDVRP I F
Sbjct: 435 LVPFLQKLVELNEDVRPHIRDRF 457
>sp|Q66KM5|CTSL2_XENTR CTD small phosphatase-like protein 2 OS=Xenopus tropicalis
GN=ctdspl2 PE=2 SV=1
Length = 466
Score = 202 bits (515), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/203 (49%), Positives = 139/203 (68%), Gaps = 1/203 (0%)
Query: 98 FDPQFFIKYLPELSDIANFRPTASPKETQGRKSVTLVLDLDETLVHSTLEYCDDADFTFT 157
FDP +FIK++P L++ R A P +T+ +LVLDLDETLVH +L +DA TF
Sbjct: 255 FDPYYFIKHVPPLTEEQLNRKPALPLKTRSTPEFSLVLDLDETLVHCSLNELEDAALTFP 314
Query: 158 VFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRV 217
V F + VYV+ RP + FLER+++++E+++FTAS+ +YA +LL+ILDP +L+ R+
Sbjct: 315 VLFQDVIYQVYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPKKRLVRHRL 374
Query: 218 YRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSLIS 277
+RE C+ G Y KDL +LG DL+K IIDNSPQ F Q++NGIPIESWF D +D L+
Sbjct: 375 FREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDKNDKELLK 434
Query: 278 LLPFLDILAD-AEDVRPIIAKTF 299
L+PFL+ L + EDVRP I F
Sbjct: 435 LVPFLENLVELNEDVRPHIRDRF 457
>sp|Q9N4V4|SCPL3_CAEEL CTD small phosphatase-like protein 3 OS=Caenorhabditis elegans
GN=scpl-3 PE=3 SV=1
Length = 287
Score = 177 bits (450), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 93/203 (45%), Positives = 126/203 (62%), Gaps = 1/203 (0%)
Query: 98 FDPQFFIKYLPELSDIANFRPTASPKETQGRKSVTLVLDLDETLVHSTLEYCDDADFTFT 157
+D + LP L++ R A P +T+ TLVLDLDETLVH +L D+A F
Sbjct: 32 YDALVMLANLPPLTEEIMSRCPALPVKTRSTPEYTLVLDLDETLVHCSLTPLDNATMVFP 91
Query: 158 VFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRV 217
V F + VYV+ RPHL+TFL R+A+ FE++IFTAS+ +YA +L DILDP I R+
Sbjct: 92 VVFQNITYQVYVRLRPHLRTFLSRMAKTFEIIIFTASKKVYANKLCDILDPRKNHIRHRL 151
Query: 218 YRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSLIS 277
+RE C+ G Y KDLT+LG D +K I+DN+ Q F Q++NGIPIESWF D +D L+
Sbjct: 152 FREHCVCVFGNYVKDLTILGRDPSKTMILDNAVQSFAYQLDNGIPIESWFHDRNDTELLK 211
Query: 278 LLPFLDILAD-AEDVRPIIAKTF 299
L FL+ + DVR I+ +
Sbjct: 212 LCSFLEAIPTLGRDVREILRHKY 234
>sp|O14595|CTDS2_HUMAN Carboxy-terminal domain RNA polymerase II polypeptide A small
phosphatase 2 OS=Homo sapiens GN=CTDSP2 PE=1 SV=2
Length = 271
Score = 160 bits (406), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 87/219 (39%), Positives = 131/219 (59%), Gaps = 18/219 (8%)
Query: 77 NQMKSFNQESDVNANSDQAQHFDPQFF----IKYLPELSDIANFRPTASPKETQGRKSVT 132
++ ++ +E++ A SD Q QF+ LPE+++ E QGR +
Sbjct: 57 TELAAYKEEANTIAKSDLLQCLQYQFYQIPGTCLLPEVTE-----------EDQGR--IC 103
Query: 133 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFT 192
+V+DLDETLVHS+ + ++ADF + H VYV +RP++ FL R+ E+FE V+FT
Sbjct: 104 VVIDLDETLVHSSFKPINNADFIVPIEIEGTTHQVYVLKRPYVDEFLRRMGELFECVLFT 163
Query: 193 ASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQV 252
AS + YA + D+LD G + R++RESC+F G Y KDL+ LG DL K I+DNSP
Sbjct: 164 ASLAKYADPVTDLLDRCG-VFRARLFRESCVFHQGCYVKDLSRLGRDLRKTLILDNSPAS 222
Query: 253 FRLQVNNGIPIESWFDDPSDCSLISLLPFLDILADAEDV 291
+ N +P++SWFDD +D L++L+P + L+ AEDV
Sbjct: 223 YIFHPENAVPVQSWFDDMADTELLNLIPIFEELSGAEDV 261
>sp|Q9PTJ6|CTDSL_CHICK CTD small phosphatase-like protein OS=Gallus gallus GN=NFI1 PE=2
SV=2
Length = 275
Score = 154 bits (390), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 78/171 (45%), Positives = 113/171 (66%), Gaps = 3/171 (1%)
Query: 127 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMF 186
G+K V V+DLDETLVHS+ + +ADF V + H VYV +RPH+ FL+R+ E+F
Sbjct: 104 GKKCV--VIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGELF 161
Query: 187 EVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAII 246
E V+FTAS + YA + D+LD G + R++RESC+F G Y KDL+ LG +L+KV I+
Sbjct: 162 ECVLFTASLAKYADPVADLLDRWG-VFRARLFRESCVFHRGNYVKDLSRLGRELSKVIIV 220
Query: 247 DNSPQVFRLQVNNGIPIESWFDDPSDCSLISLLPFLDILADAEDVRPIIAK 297
DNSP + N +P++SWFDD +D L+ L+PF + L+ E+V ++ K
Sbjct: 221 DNSPASYIFHPENAVPVQSWFDDMTDTELLDLIPFFEGLSKEEEVYSMLHK 271
>sp|Q9GZU7|CTDS1_HUMAN Carboxy-terminal domain RNA polymerase II polypeptide A small
phosphatase 1 OS=Homo sapiens GN=CTDSP1 PE=1 SV=1
Length = 261
Score = 153 bits (386), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 119/191 (62%), Gaps = 4/191 (2%)
Query: 107 LPELSDIANFRPTASPKETQGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHT 166
+P+ + + P A + Q + +V+DLDETLVHS+ + ++ADF V + H
Sbjct: 70 IPKQTPVQYLLPEA---KAQDSDKICVVIDLDETLVHSSFKPVNNADFIIPVEIDGVVHQ 126
Query: 167 VYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD 226
VYV +RPH+ FL+R+ E+FE V+FTAS + YA + D+LD G +R ++RESC+F
Sbjct: 127 VYVLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRAR-LFRESCVFHR 185
Query: 227 GTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSLISLLPFLDILA 286
G Y KDL+ LG DL +V I+DNSP + +N +P+ SWFD+ SD L LLPF + L+
Sbjct: 186 GNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPVASWFDNMSDTELHDLLPFFEQLS 245
Query: 287 DAEDVRPIIAK 297
+DV ++ +
Sbjct: 246 RVDDVYSVLRQ 256
>sp|P58466|CTDS1_MOUSE Carboxy-terminal domain RNA polymerase II polypeptide A small
phosphatase 1 OS=Mus musculus GN=Ctdsp1 PE=1 SV=1
Length = 261
Score = 152 bits (385), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 119/191 (62%), Gaps = 4/191 (2%)
Query: 107 LPELSDIANFRPTASPKETQGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHT 166
+P+ + + P A + Q + +V+DLDETLVHS+ + ++ADF V + H
Sbjct: 70 IPKHTPVQYLLPEA---KAQDSDKICVVIDLDETLVHSSFKPVNNADFIIPVEIDGVVHQ 126
Query: 167 VYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD 226
VYV +RPH+ FL+R+ E+FE V+FTAS + YA + D+LD G +R ++RESC+F
Sbjct: 127 VYVLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRAR-LFRESCVFHR 185
Query: 227 GTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSLISLLPFLDILA 286
G Y KDL+ LG DL +V I+DNSP + +N +P+ SWFD+ SD L LLPF + L+
Sbjct: 186 GNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPVASWFDNMSDTELHDLLPFFEQLS 245
Query: 287 DAEDVRPIIAK 297
+DV ++ +
Sbjct: 246 RVDDVYSVLRQ 256
>sp|Q8BX07|CTDS2_MOUSE Carboxy-terminal domain RNA polymerase II polypeptide A small
phosphatase 2 OS=Mus musculus GN=Ctdsp2 PE=2 SV=1
Length = 270
Score = 152 bits (385), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 127/215 (59%), Gaps = 18/215 (8%)
Query: 81 SFNQESDVNANSDQAQHFDPQFF----IKYLPELSDIANFRPTASPKETQGRKSVTLVLD 136
+ +E++ A SD Q QF+ LPE+++ + QGR + +V+D
Sbjct: 60 THKEEANTIAKSDLLQCLQYQFYQIPGTCLLPEVTE-----------QDQGR--ICVVID 106
Query: 137 LDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQS 196
LDETLVHS+ + ++ADF V H VYV +RP++ FL R+ E+FE V+FTAS +
Sbjct: 107 LDETLVHSSFKPINNADFIVPVEIEGTTHQVYVLKRPYVDEFLRRMGELFECVLFTASLA 166
Query: 197 IYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQ 256
YA + D+LD G + R++RE+C+F G Y KDL+ LG DL K I+DNSP +
Sbjct: 167 KYADPVTDLLDRCG-VFRARLFREACVFHQGCYVKDLSRLGRDLRKTVILDNSPASYIFH 225
Query: 257 VNNGIPIESWFDDPSDCSLISLLPFLDILADAEDV 291
N +P++SWFDD +D L++L+P + L+ +DV
Sbjct: 226 PENAVPVQSWFDDMADTELLNLIPVFEELSGTDDV 260
>sp|Q8JIL9|CNEP1_XENLA CTD nuclear envelope phosphatase 1 OS=Xenopus laevis GN=ctdnep1
PE=1 SV=1
Length = 244
Score = 152 bits (384), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/204 (39%), Positives = 120/204 (58%), Gaps = 9/204 (4%)
Query: 104 IKYLPELSDIANFRPTASPKETQGRKSVTLVLDLDETLVHS--------TLEYCDDADFT 155
I+Y D+ P + + +Q ++ V LVLDLDETL+HS T+ DF
Sbjct: 36 IQYQTVRYDVLPLSPASRNRLSQVKRKV-LVLDLDETLIHSHHDGVLRPTVRPGTPPDFI 94
Query: 156 FTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISR 215
V + +V +RPH+ FLE V++ +E+V+FTAS IY + + D LD + ++ R
Sbjct: 95 LKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNNKGVLRR 154
Query: 216 RVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSL 275
R YR+ C G+Y KDL+V+ DL+ V I+DNSP +R +N IPI+SWF DPSD +L
Sbjct: 155 RFYRQHCTLELGSYIKDLSVVHSDLSSVVILDNSPGAYRSHPDNAIPIKSWFSDPSDTAL 214
Query: 276 ISLLPFLDILADAEDVRPIIAKTF 299
++LLP LD L DVR ++++
Sbjct: 215 LNLLPMLDALRFTADVRSVLSRNL 238
>sp|Q28HW9|CNEP1_XENTR CTD nuclear envelope phosphatase 1 OS=Xenopus tropicalis GN=ctdnep1
PE=2 SV=1
Length = 244
Score = 152 bits (383), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/204 (39%), Positives = 120/204 (58%), Gaps = 9/204 (4%)
Query: 104 IKYLPELSDIANFRPTASPKETQGRKSVTLVLDLDETLVHS--------TLEYCDDADFT 155
I+Y D+ P + + +Q ++ V LVLDLDETL+HS T+ DF
Sbjct: 36 IQYQTVRYDVLPLSPASRNRLSQVKRKV-LVLDLDETLIHSHHDGVLRPTVRPGTPPDFI 94
Query: 156 FTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISR 215
V + +V +RPH+ FLE V++ +E+V+FTAS IY + + D LD + ++ R
Sbjct: 95 LKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNNRGVLRR 154
Query: 216 RVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSL 275
R YR+ C G+Y KDL+V+ DL+ V I+DNSP +R +N IPI+SWF DPSD +L
Sbjct: 155 RFYRQHCTLELGSYIKDLSVVHSDLSSVVILDNSPGAYRSHPDNAIPIKSWFSDPSDTAL 214
Query: 276 ISLLPFLDILADAEDVRPIIAKTF 299
++LLP LD L DVR ++++
Sbjct: 215 LNLLPMLDALRFTADVRSVLSRNL 238
>sp|P58465|CTDSL_MOUSE CTD small phosphatase-like protein OS=Mus musculus GN=Ctdspl PE=2
SV=3
Length = 276
Score = 151 bits (382), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 76/171 (44%), Positives = 113/171 (66%), Gaps = 3/171 (1%)
Query: 127 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMF 186
G+K V V+DLDETLVHS+ + +ADF V + H VYV +RPH+ FL+R+ ++F
Sbjct: 105 GKKCV--VIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQLF 162
Query: 187 EVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAII 246
E V+FTAS + YA + D+LD G + R++RESC+F G Y KDL+ LG +L+KV I+
Sbjct: 163 ECVLFTASLAKYADPVADLLDRWG-VFRARLFRESCVFHRGNYVKDLSRLGRELSKVIIV 221
Query: 247 DNSPQVFRLQVNNGIPIESWFDDPSDCSLISLLPFLDILADAEDVRPIIAK 297
DNSP + N +P++SWFDD +D L+ L+PF + L+ +DV ++ +
Sbjct: 222 DNSPASYIFHPENAVPVQSWFDDMTDTELLDLIPFFEGLSREDDVYSMLHR 272
>sp|O15194|CTDSL_HUMAN CTD small phosphatase-like protein OS=Homo sapiens GN=CTDSPL PE=1
SV=2
Length = 276
Score = 151 bits (382), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 76/171 (44%), Positives = 113/171 (66%), Gaps = 3/171 (1%)
Query: 127 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMF 186
G+K V V+DLDETLVHS+ + +ADF V + H VYV +RPH+ FL+R+ ++F
Sbjct: 105 GKKCV--VIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQLF 162
Query: 187 EVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAII 246
E V+FTAS + YA + D+LD G + R++RESC+F G Y KDL+ LG +L+KV I+
Sbjct: 163 ECVLFTASLAKYADPVADLLDRWG-VFRARLFRESCVFHRGNYVKDLSRLGRELSKVIIV 221
Query: 247 DNSPQVFRLQVNNGIPIESWFDDPSDCSLISLLPFLDILADAEDVRPIIAK 297
DNSP + N +P++SWFDD +D L+ L+PF + L+ +DV ++ +
Sbjct: 222 DNSPASYIFHPENAVPVQSWFDDMTDTELLDLIPFFEGLSREDDVYSMLHR 272
>sp|Q1RMV9|CNEP1_BOVIN CTD nuclear envelope phosphatase 1 OS=Bos taurus GN=CTDNEP1 PE=2
SV=1
Length = 244
Score = 151 bits (381), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 80/208 (38%), Positives = 119/208 (57%), Gaps = 9/208 (4%)
Query: 104 IKYLPELSDIANFRPTASPKETQGRKSVTLVLDLDETLVHS--------TLEYCDDADFT 155
I+Y DI P + + +Q ++ + LVLDLDETL+HS T+ DF
Sbjct: 36 IQYQTVRYDILPLSPVSRNRLSQVKRKI-LVLDLDETLIHSHHDGVLRPTVRPGTPPDFI 94
Query: 156 FTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISR 215
V + +V +RPH+ FLE V++ +E+V+FTAS IY + + D LD ++ R
Sbjct: 95 LKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRSILKR 154
Query: 216 RVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSL 275
R YR+ C G+Y KDL+V+ DL+ + I+DNSP +R +N IPI+SWF DPSD +L
Sbjct: 155 RYYRQHCTLELGSYIKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSWFSDPSDTAL 214
Query: 276 ISLLPFLDILADAEDVRPIIAKTFGNKE 303
++LLP LD L DVR ++++
Sbjct: 215 LNLLPMLDALRFTADVRSVLSRNLHQHR 242
>sp|O95476|CNEP1_HUMAN CTD nuclear envelope phosphatase 1 OS=Homo sapiens GN=CTDNEP1 PE=1
SV=2
Length = 244
Score = 150 bits (380), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 80/208 (38%), Positives = 118/208 (56%), Gaps = 9/208 (4%)
Query: 104 IKYLPELSDIANFRPTASPKETQGRKSVTLVLDLDETLVHS--------TLEYCDDADFT 155
I+Y DI P + + Q ++ + LVLDLDETL+HS T+ DF
Sbjct: 36 IQYQTVRYDILPLSPVSRNRLAQVKRKI-LVLDLDETLIHSHHDGVLRPTVRPGTPPDFI 94
Query: 156 FTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISR 215
V + +V +RPH+ FLE V++ +E+V+FTAS IY + + D LD ++ R
Sbjct: 95 LKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRSILKR 154
Query: 216 RVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSL 275
R YR+ C G+Y KDL+V+ DL+ + I+DNSP +R +N IPI+SWF DPSD +L
Sbjct: 155 RYYRQHCTLELGSYIKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSWFSDPSDTAL 214
Query: 276 ISLLPFLDILADAEDVRPIIAKTFGNKE 303
++LLP LD L DVR ++++
Sbjct: 215 LNLLPMLDALRFTADVRSVLSRNLHQHR 242
>sp|Q5U3T3|CNEPB_DANRE CTD nuclear envelope phosphatase 1B OS=Danio rerio GN=ctdnep1b PE=2
SV=1
Length = 245
Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/204 (39%), Positives = 119/204 (58%), Gaps = 9/204 (4%)
Query: 104 IKYLPELSDIANFRPTASPKETQGRKSVTLVLDLDETLVHS--------TLEYCDDADFT 155
I+Y DI + P + + ++ + LVLDLDETL+HS T+ DF
Sbjct: 37 IQYQTVRYDILSLSPISRNRLNNVKRKI-LVLDLDETLIHSHHDGVLRPTVRPGTPPDFI 95
Query: 156 FTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISR 215
V + +V +RPH+ FLE V++ +E+V+FTAS IY + + D LD + ++ R
Sbjct: 96 LKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNNKAILKR 155
Query: 216 RVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSL 275
R YR+ C G+Y KDL+V+ DL+ V I+DNSP +R +N IPI+SWF DPSD +L
Sbjct: 156 RYYRQHCTLDSGSYIKDLSVVHDDLSSVVILDNSPGAYRSHPDNAIPIKSWFSDPSDTAL 215
Query: 276 ISLLPFLDILADAEDVRPIIAKTF 299
++LLP LD L DVR ++++
Sbjct: 216 LNLLPMLDALRFPADVRSVLSRNL 239
>sp|Q3B7T6|CNEP1_RAT CTD nuclear envelope phosphatase 1 OS=Rattus norvegicus GN=Ctdnep1
PE=2 SV=2
Length = 244
Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/208 (38%), Positives = 118/208 (56%), Gaps = 9/208 (4%)
Query: 104 IKYLPELSDIANFRPTASPKETQGRKSVTLVLDLDETLVHS--------TLEYCDDADFT 155
I+Y DI P + + Q ++ + LVLDLDETL+HS T+ DF
Sbjct: 36 IQYQTVRYDILPLSPLSRNRLAQVKRKI-LVLDLDETLIHSHHDGVLRPTVRPGTPPDFI 94
Query: 156 FTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISR 215
V + +V +RPH+ FLE V++ +E+V+FTAS IY + + D LD ++ R
Sbjct: 95 LKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRSILKR 154
Query: 216 RVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSL 275
R YR+ C G+Y KDL+V+ DL+ + I+DNSP +R +N IPI+SWF DPSD +L
Sbjct: 155 RYYRQHCTLELGSYIKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSWFSDPSDTAL 214
Query: 276 ISLLPFLDILADAEDVRPIIAKTFGNKE 303
++LLP LD L DVR ++++
Sbjct: 215 LNLLPMLDALRFTADVRSVLSRNLHQHR 242
>sp|Q3TP92|CNEP1_MOUSE CTD nuclear envelope phosphatase 1 OS=Mus musculus GN=Ctdnep1 PE=2
SV=2
Length = 244
Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/208 (38%), Positives = 118/208 (56%), Gaps = 9/208 (4%)
Query: 104 IKYLPELSDIANFRPTASPKETQGRKSVTLVLDLDETLVHS--------TLEYCDDADFT 155
I+Y DI P + + Q ++ + LVLDLDETL+HS T+ DF
Sbjct: 36 IQYQTVRYDILPLSPLSRNRLAQVKRKI-LVLDLDETLIHSHHDGVLRPTVRPGTPPDFI 94
Query: 156 FTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISR 215
V + +V +RPH+ FLE V++ +E+V+FTAS IY + + D LD ++ R
Sbjct: 95 LKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRSILKR 154
Query: 216 RVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSL 275
R YR+ C G+Y KDL+V+ DL+ + I+DNSP +R +N IPI+SWF DPSD +L
Sbjct: 155 RYYRQHCTLELGSYIKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSWFSDPSDTAL 214
Query: 276 ISLLPFLDILADAEDVRPIIAKTFGNKE 303
++LLP LD L DVR ++++
Sbjct: 215 LNLLPMLDALRFTADVRSVLSRNLHQHR 242
>sp|Q29I63|CNEP1_DROPS CTD nuclear envelope phosphatase 1 homolog OS=Drosophila
pseudoobscura pseudoobscura GN=l(1)G0269 PE=3 SV=1
Length = 243
Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/203 (40%), Positives = 121/203 (59%), Gaps = 9/203 (4%)
Query: 103 FIKYLPELSDIANFRPTASPKETQGRKSVTLVLDLDETLVHS--------TLEYCDDADF 154
FI+Y P ++ P + + + ++ TLVLDLDETL+HS T++ DF
Sbjct: 34 FIQYQPVKYELFPLSPVSRHRLSLVQRK-TLVLDLDETLIHSHHNAMPRNTVKPGTPHDF 92
Query: 155 TFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLIS 214
T V + +V +RPH+ FL+ V++ +++V+FTAS IY A + D LD ++
Sbjct: 93 TVKVTIDRNPVRFFVHKRPHVDYFLDVVSQWYDLVVFTASMEIYGAAVADKLDNGRNILR 152
Query: 215 RRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCS 274
RR YR+ C G+YTKDL+ + DL ++ IIDNSP +R NN IPI+SWF DP D +
Sbjct: 153 RRYYRQHCTPDYGSYTKDLSAICSDLNRIFIIDNSPGAYRCFPNNAIPIKSWFSDPMDTA 212
Query: 275 LISLLPFLDILADAEDVRPIIAK 297
L+SLLP LD L DVR ++++
Sbjct: 213 LLSLLPMLDALRFTNDVRSVLSR 235
>sp|Q9VRG7|CNEP1_DROME CTD nuclear envelope phosphatase 1 homolog OS=Drosophila
melanogaster GN=l(1)G0269 PE=2 SV=1
Length = 243
Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/203 (40%), Positives = 121/203 (59%), Gaps = 9/203 (4%)
Query: 103 FIKYLPELSDIANFRPTASPKETQGRKSVTLVLDLDETLVHS--------TLEYCDDADF 154
FI+Y P ++ P + + + ++ TLVLDLDETL+HS T++ DF
Sbjct: 34 FIQYQPVKYELFPLSPVSRHRLSLVQRK-TLVLDLDETLIHSHHNAMPRNTVKPGTPHDF 92
Query: 155 TFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLIS 214
T V + +V +RPH+ FL+ V++ +++V+FTAS IY A + D LD ++
Sbjct: 93 TVKVTIDRNPVRFFVHKRPHVDYFLDVVSQWYDLVVFTASMEIYGAAVADKLDNGRNILR 152
Query: 215 RRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCS 274
RR YR+ C G+YTKDL+ + DL ++ IIDNSP +R NN IPI+SWF DP D +
Sbjct: 153 RRYYRQHCTPDYGSYTKDLSAICSDLNRIFIIDNSPGAYRCFPNNAIPIKSWFSDPMDTA 212
Query: 275 LISLLPFLDILADAEDVRPIIAK 297
L+SLLP LD L DVR ++++
Sbjct: 213 LLSLLPMLDALRFTNDVRSVLSR 235
>sp|Q07800|PSR1_YEAST Phosphatase PSR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PSR1 PE=1 SV=1
Length = 427
Score = 150 bits (378), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/162 (46%), Positives = 108/162 (66%), Gaps = 3/162 (1%)
Query: 125 TQGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE 184
T+G+K L+LDLDETLVHS+ +Y ADF +V + + H VYV +RP ++ FLERV +
Sbjct: 254 TKGKK--CLILDLDETLVHSSFKYLRSADFVLSVEIDDQVHNVYVIKRPGVEEFLERVGK 311
Query: 185 MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVA 244
+FEVV+FTAS S Y LLDILD D K+I R++RE+C +G Y K+L+ +G L+ +
Sbjct: 312 LFEVVVFTASVSRYGDPLLDILDTD-KVIHHRLFREACYNYEGNYIKNLSQIGRPLSDII 370
Query: 245 IIDNSPQVFRLQVNNGIPIESWFDDPSDCSLISLLPFLDILA 286
I+DNSP + + IPI SWF D D L+ ++P L+ L+
Sbjct: 371 ILDNSPASYIFHPQHAIPISSWFSDTHDNELLDIIPLLEDLS 412
>sp|Q5U395|CNEPA_DANRE CTD nuclear envelope phosphatase 1A OS=Danio rerio GN=ctdnep1a PE=2
SV=1
Length = 245
Score = 148 bits (374), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 118/204 (57%), Gaps = 9/204 (4%)
Query: 104 IKYLPELSDIANFRPTASPKETQGRKSVTLVLDLDETLVHS--------TLEYCDDADFT 155
I+Y DI P + + ++ + LVLDLDETL+HS T+ DF
Sbjct: 37 IQYQTVRYDILPLSPISRNRLNAVKRKI-LVLDLDETLIHSHHDGVLRPTVRPGTPPDFI 95
Query: 156 FTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISR 215
V + +V +RPH+ FLE V++ +E+V+FTAS IY + + D LD + ++ R
Sbjct: 96 LKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNNRGILKR 155
Query: 216 RVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSL 275
R YR+ C G+Y KDL+V+ DL+ + I+DNSP +R +N IPI+SWF DPSD +L
Sbjct: 156 RYYRQHCTLDLGSYIKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSWFSDPSDTAL 215
Query: 276 ISLLPFLDILADAEDVRPIIAKTF 299
++LLP LD L DVR ++++
Sbjct: 216 LNLLPMLDALRFTSDVRSVLSRNL 239
>sp|Q09695|YA22_SCHPO Uncharacterized protein C2F7.02c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC2F7.02c PE=1 SV=1
Length = 325
Score = 147 bits (372), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 113/173 (65%), Gaps = 3/173 (1%)
Query: 123 KETQGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERV 182
KE +G+K L+LDLDETLVHS+ +Y + ADF ++ + +H V V +RP + FL+++
Sbjct: 152 KEDEGKK--CLILDLDETLVHSSFKYIEPADFVVSIEIDGLQHDVRVVKRPGVDEFLKKM 209
Query: 183 AEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAK 242
+MFE+V+FTAS + YA +LD+LD +I R++RE+C +G + KDL+ LG +L
Sbjct: 210 GDMFEIVVFTASLAKYADPVLDMLD-HSHVIRHRLFREACCNYEGNFVKDLSQLGRNLED 268
Query: 243 VAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSLISLLPFLDILADAEDVRPII 295
IIDNSP + ++ +PI SWF+D D LI L+PFL+ LA DV ++
Sbjct: 269 SIIIDNSPSSYIFHPSHAVPISSWFNDMHDMELIDLIPFLEHLARVPDVSTVL 321
>sp|Q07949|PSR2_YEAST Probable phosphatase PSR2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PSR2 PE=1 SV=1
Length = 397
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 106/167 (63%), Gaps = 1/167 (0%)
Query: 122 PKETQGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLER 181
PK + ++ L+LDLDETLVHS+ +Y ADF V + + H VYV +RP + FL R
Sbjct: 219 PKLQEFQQKKCLILDLDETLVHSSFKYMHSADFVLPVEIDDQVHNVYVIKRPGVDEFLNR 278
Query: 182 VAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLA 241
V++++EVV+FTAS S YA LLD LDP+G I R++RE+C +G Y K+L+ +G L+
Sbjct: 279 VSQLYEVVVFTASVSRYANPLLDTLDPNG-TIHHRLFREACYNYEGNYIKNLSQIGRPLS 337
Query: 242 KVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSLISLLPFLDILADA 288
+ I+DNSP + + +PI SWF D D L+ ++P L+ L+
Sbjct: 338 ETIILDNSPASYIFHPQHAVPISSWFSDTHDNELLDIIPLLEDLSSG 384
>sp|Q61C05|CNEP1_CAEBR CTD nuclear envelope phosphatase 1 homolog OS=Caenorhabditis
briggsae GN=scpl-2 PE=3 SV=1
Length = 246
Score = 142 bits (358), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 106/177 (59%), Gaps = 8/177 (4%)
Query: 129 KSVTLVLDLDETLVHS--------TLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLE 180
K LVLDLDETL+HS T++ +DFT V + V +RPH+ FL
Sbjct: 56 KRKILVLDLDETLIHSHHDGVLRQTVKPGTPSDFTIRVVIDRHPVKFSVHERPHVDYFLT 115
Query: 181 RVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDL 240
V++ +E+V+FTAS +Y + + D LD ++ RR +R+ C G YTKDL+ + DL
Sbjct: 116 VVSQWYELVVFTASMEVYGSSVADKLDRGRGILKRRYFRQHCTMEVGGYTKDLSAIHPDL 175
Query: 241 AKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSLISLLPFLDILADAEDVRPIIAK 297
+ + I+DNSP +R +N IPI SWF DP+D L++LLPFLD L DVR ++++
Sbjct: 176 SSICILDNSPGAYRKFPHNAIPIPSWFSDPNDTCLLNLLPFLDALRFTSDVRSVLSR 232
>sp|Q20432|CNEP1_CAEEL CTD nuclear envelope phosphatase 1 homolog OS=Caenorhabditis
elegans GN=scpl-2 PE=3 SV=1
Length = 246
Score = 142 bits (357), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 105/177 (59%), Gaps = 8/177 (4%)
Query: 129 KSVTLVLDLDETLVHS--------TLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLE 180
K LVLDLDETL+HS T++ +DFT V + V +RPH+ FL
Sbjct: 56 KRKILVLDLDETLIHSHHDGVLRQTVKPGTPSDFTIRVVIDRHPVKFSVHERPHVDYFLS 115
Query: 181 RVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDL 240
V++ +E+V+FTAS +Y + D LD ++ RR +R+ C G YTKDL+ + DL
Sbjct: 116 VVSQWYELVVFTASMEVYGTSVADRLDRGRGILKRRYFRQHCTMEVGGYTKDLSAIHPDL 175
Query: 241 AKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSLISLLPFLDILADAEDVRPIIAK 297
+ + I+DNSP +R +N IPI SWF DP+D L++LLPFLD L DVR ++++
Sbjct: 176 SSICILDNSPGAYRKFPHNAIPIPSWFSDPNDTCLLNLLPFLDALRFTSDVRSVLSR 232
>sp|O59718|NEM1_SCHPO Nuclear envelope morphology protein 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=nem1 PE=3 SV=1
Length = 476
Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 96/167 (57%), Gaps = 2/167 (1%)
Query: 132 TLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTV--YVKQRPHLKTFLERVAEMFEVV 189
TLVLDLDETL+HS EH + Y+ +RPHL FL V++ F ++
Sbjct: 305 TLVLDLDETLIHSVSRGSRTTSGQPIEVHVPGEHPILYYIHKRPHLDYFLSNVSQWFRLI 364
Query: 190 IFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNS 249
+FTAS YA ++D L+ D K+ ++R YR+ C D ++ KD+++ + L+++ IIDNS
Sbjct: 365 LFTASVQPYADPIIDYLERDKKIFAKRYYRQHCALVDSSFVKDISICNIHLSRIMIIDNS 424
Query: 250 PQVFRLQVNNGIPIESWFDDPSDCSLISLLPFLDILADAEDVRPIIA 296
P + N IPIE W DPSD L++LL FL L DVR ++
Sbjct: 425 PASYNAHKENAIPIEGWISDPSDVDLLNLLSFLHALQYVHDVRDLLG 471
>sp|Q9XYL0|CTDS_DICDI Probable C-terminal domain small phosphatase OS=Dictyostelium
discoideum GN=fcpA PE=3 SV=1
Length = 306
Score = 129 bits (324), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/136 (49%), Positives = 85/136 (62%), Gaps = 1/136 (0%)
Query: 132 TLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIF 191
TLVLDLDETLVHS+ + + DF V H VYV +RP + FL +AE FE+V+F
Sbjct: 138 TLVLDLDETLVHSSFKPVHNPDFIVPVEIEGTIHQVYVVKRPFVDDFLRAIAEKFEIVVF 197
Query: 192 TASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQ 251
TAS + YA +LD LD G++I R++RESC G Y KDL+ LG DL I+DNSP
Sbjct: 198 TASLAKYADPVLDFLD-TGRVIHYRLFRESCHNHKGNYVKDLSRLGRDLKSTIIVDNSPS 256
Query: 252 VFRLQVNNGIPIESWF 267
+ N IPI+SWF
Sbjct: 257 SYLFHPENAIPIDSWF 272
>sp|Q4WI16|TIM50_ASPFU Mitochondrial import inner membrane translocase subunit tim50
OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 /
CBS 101355 / FGSC A1100) GN=tim50 PE=3 SV=2
Length = 501
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 126/240 (52%), Gaps = 30/240 (12%)
Query: 69 NGSLYLAINQMKSFNQESDVNANSDQAQHFD-PQFFIKYLPELSDIANFR-----PTASP 122
G YL N + E + A+ D + ++ + LSDI ++ P P
Sbjct: 158 GGVAYLGRN----WETEEEAKAHPDIPSGWSFSSWYNRMKARLSDITSYYKDPAFPKLLP 213
Query: 123 KETQG-RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLER 181
E R+ TLVL L++ LVHS E+ +EH + +RP + FL
Sbjct: 214 DEDPNLRQPYTLVLSLEDLLVHS--EWS-------------REHGWRIAKRPGVDYFLRY 258
Query: 182 VAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLA 241
+ + +E+V+FT+ S+ A Q+L LDP ++I ++RE+ + DG Y KDL+ L DL+
Sbjct: 259 LNQYYELVLFTSVPSMMADQVLRKLDPY-RIIRWPLFREATRYKDGEYIKDLSYLNRDLS 317
Query: 242 KVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSLISLLPFLDILA--DAEDVRPIIAKTF 299
KV +ID + RLQ N I ++ W DP D +L++L+PFL+ +A EDVRP++ K+F
Sbjct: 318 KVILIDTKEEHARLQPENAIILDKWLGDPKDKNLVALIPFLEYIAGMGVEDVRPVL-KSF 376
>sp|P38757|NEM1_YEAST Nuclear envelope morphology protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=NEM1 PE=1 SV=1
Length = 446
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 106/196 (54%), Gaps = 20/196 (10%)
Query: 125 TQGRKSVTLVLDLDETLVHS----TLEYCDDADFTFTVFFNMKE-HTVY-VKQRPHLKTF 178
TQ +K LV+DLDETL+HS T V F + T+Y + +RP+ F
Sbjct: 248 TQKKKK--LVIDLDETLIHSASRSTTHSNSSQGHLVEVKFGLSGIRTLYFIHKRPYCDLF 305
Query: 179 LERVAEMFEVVIFTASQSIYAAQLLDILDPD-GKLISRRVYRESCIFSDGT-YTKDLTVL 236
L +V++ ++++IFTAS YA ++D L+ S+R YR C+ DG Y KDL+++
Sbjct: 306 LTKVSKWYDLIIFTASMKEYADPVIDWLESSFPSSFSKRYYRSDCVLRDGVGYIKDLSIV 365
Query: 237 ----------GVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSLISLLPFLDILA 286
L V IIDNSP + + V+N I +E W DP+D L++LLPFL+ +
Sbjct: 366 KDSEENGKGSSSSLDDVIIIDNSPVSYAMNVDNAIQVEGWISDPTDTDLLNLLPFLEAMR 425
Query: 287 DAEDVRPIIAKTFGNK 302
+ DVR I+A G K
Sbjct: 426 YSTDVRNILALKHGEK 441
>sp|Q6FRX4|TIM50_CANGA Mitochondrial import inner membrane translocase subunit TIM50
OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM
3761 / NBRC 0622 / NRRL Y-65) GN=TIM50 PE=3 SV=1
Length = 485
Score = 111 bits (278), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 103/177 (58%), Gaps = 19/177 (10%)
Query: 128 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFE 187
++ +TLV+ L++ LVHS + ++H +RP FL +++ +E
Sbjct: 195 QRPLTLVITLEDFLVHSEWD---------------QKHGWRTAKRPGADYFLGYLSQYYE 239
Query: 188 VVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIID 247
+V+F+++ +YA ++ + +DP IS +++E C++ DG + KDL+ L DL KV IID
Sbjct: 240 IVLFSSNYMMYAEKIAEKMDPIHAFISYNLFKEHCVYKDGVHIKDLSKLNRDLKKVMIID 299
Query: 248 NSPQVFRLQVNNGIPIESWFDDPSDCSLISLLPFLDILA--DAEDVRPIIAKTFGNK 302
++LQ N IP++ W D +D L+ L+PFL+ +A EDVRPI+ K++ NK
Sbjct: 300 TDENSYKLQPENAIPMDPW-DGKADDKLLRLIPFLEYMATQQVEDVRPIL-KSYHNK 354
>sp|Q02776|TIM50_YEAST Mitochondrial import inner membrane translocase subunit TIM50
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=TIM50 PE=1 SV=1
Length = 476
Score = 108 bits (271), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 98/166 (59%), Gaps = 18/166 (10%)
Query: 132 TLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIF 191
TLV+ L++ LVHS E+ ++H +RP FL +++ +E+V+F
Sbjct: 193 TLVITLEDFLVHS--EWS-------------QKHGWRTAKRPGADYFLGYLSQYYEIVLF 237
Query: 192 TASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQ 251
+++ +Y+ ++ + LDP +S +++E C++ DG + KDL+ L DL+KV IID P
Sbjct: 238 SSNYMMYSDKIAEKLDPIHAFVSYNLFKEHCVYKDGVHIKDLSKLNRDLSKVIIIDTDPN 297
Query: 252 VFRLQVNNGIPIESWFDDPSDCSLISLLPFLDILA--DAEDVRPII 295
++LQ N IP+E W + +D L+ L+PFL+ LA +DVRPI+
Sbjct: 298 SYKLQPENAIPMEPW-NGEADDKLVRLIPFLEYLATQQTKDVRPIL 342
>sp|Q5B4P0|TIM50_EMENI Mitochondrial import inner membrane translocase subunit tim50
OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /
CBS 112.46 / NRRL 194 / M139) GN=tim50 PE=3 SV=1
Length = 532
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 102/174 (58%), Gaps = 19/174 (10%)
Query: 128 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFE 187
R+ TLVL L++ LVHS E+ +EH V +RP + FL + + +E
Sbjct: 249 RQPYTLVLSLEDLLVHS--EWS-------------REHGWRVAKRPGVDYFLRYLNQYYE 293
Query: 188 VVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIID 247
+V+FT+ S+ A Q+L LDP ++I ++RE+ + DG Y KDL+ L DL+KV +ID
Sbjct: 294 LVLFTSVPSMMADQVLRKLDPY-RIIRWPLFREATRYKDGEYIKDLSYLNRDLSKVILID 352
Query: 248 NSPQVFRLQVNNGIPIESWFDDPSDCSLISLLPFLDILA--DAEDVRPIIAKTF 299
+ RLQ N I ++ W +P D +L++L+PFL+ LA +DVR ++ K+F
Sbjct: 353 TKEEHARLQPENAIILDKWNGNPKDKTLVALIPFLEYLAGMGVDDVRTVL-KSF 405
>sp|Q6CM45|TIM50_KLULA Mitochondrial import inner membrane translocase subunit TIM50
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=TIM50
PE=3 SV=1
Length = 480
Score = 105 bits (261), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 98/170 (57%), Gaps = 19/170 (11%)
Query: 132 TLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIF 191
TLVL L++ LVHS E+ + + +RP + FL +++ +E+V+F
Sbjct: 196 TLVLSLEDLLVHS--EWTQQSGWR-------------TAKRPGVDYFLGYLSQYYEIVLF 240
Query: 192 TASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQ 251
+++ +YA ++ + LDP I+ +++E C++ DG + KDL+ L DL KV IID
Sbjct: 241 SSNYMMYAEKIAEKLDPIHAFITYNLFKEHCLYKDGVHIKDLSKLNRDLGKVLIIDTDEN 300
Query: 252 VFRLQVNNGIPIESWFDDPSDCSLISLLPFLDILADAE--DVRPIIAKTF 299
F+LQ N I +E W D +D L+ L+PFL+ LA + DVRPI+ K+F
Sbjct: 301 SFKLQPENAIYLEPW-DGKADDRLLRLIPFLEYLATQQVSDVRPIL-KSF 348
>sp|Q4PEW9|TIM50_USTMA Mitochondrial import inner membrane translocase subunit TIM50
OS=Ustilago maydis (strain 521 / FGSC 9021) GN=TIM50
PE=3 SV=1
Length = 493
Score = 104 bits (260), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 92/174 (52%), Gaps = 17/174 (9%)
Query: 129 KSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEV 188
+ T+V+D+D+ LVHS E+ +EH +RP L FL +++ +E+
Sbjct: 219 RPFTMVIDIDDLLVHS--EWS-------------REHGWRTAKRPGLDHFLGYLSQFYEI 263
Query: 189 VIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDN 248
V+FT A +++ LDPD + I+ ++RESC DG KDL L DL+KV ++D
Sbjct: 264 VLFTTQPFFTAGPIIEKLDPDRRFITYTLFRESCRTVDGKLVKDLNHLNRDLSKVVVVDT 323
Query: 249 SPQVFRLQVNNGIPIESWFDDPSDCSLISLLPFLDILA--DAEDVRPIIAKTFG 300
+P F L NGI ++ W + D LI L+PF + + + +DVR I G
Sbjct: 324 NPDSFHLHPENGILVKPWKGEREDRELIGLIPFFEAIGIYNIDDVRNTIKAYTG 377
>sp|Q59W44|TIM50_CANAL Mitochondrial import inner membrane translocase subunit TIM50
OS=Candida albicans (strain SC5314 / ATCC MYA-2876)
GN=TIM50 PE=3 SV=1
Length = 469
Score = 104 bits (259), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 95/172 (55%), Gaps = 18/172 (10%)
Query: 126 QGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEM 185
Q R+ +TLV+ LD+ L+HS + +H +RP L FL +++
Sbjct: 183 QYRRPLTLVVTLDDFLIHSNWD---------------TQHGWRTGKRPGLDYFLGYLSQY 227
Query: 186 FEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAI 245
+E+V+F+++ IY+ + ++ LDP IS ++RE+C + DG KDL++L DL K +
Sbjct: 228 YEIVVFSSNSQIYSDKTVNKLDPYHAYISYALFREACRYKDGKLIKDLSLLNRDLGKTVM 287
Query: 246 IDNSPQVFRLQVNNGIPIESWFDDPSDCSLISLLPFLDILAD--AEDVRPII 295
ID LQ N I ++ W P D LISL+PFL+ LA +DVRPI+
Sbjct: 288 IDVDEDSAALQPENSIIVKKWEGQP-DEYLISLIPFLEYLATQPVKDVRPIL 338
>sp|Q6BVY9|TIM50_DEBHA Mitochondrial import inner membrane translocase subunit TIM50
OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 /
JCM 1990 / NBRC 0083 / IGC 2968) GN=TIM50 PE=3 SV=1
Length = 471
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 99/183 (54%), Gaps = 20/183 (10%)
Query: 115 NFRPTASPKETQGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPH 174
N P +P+ R+ +TLV+ LD+ L+HS + +H +RP
Sbjct: 176 NLLPPPAPEAY--RRPLTLVVTLDDLLIHSDWD---------------TKHGWRTGKRPG 218
Query: 175 LKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLT 234
L FL +++ +E+VIF ++ +Y+ + LDP +S ++RE+C + DG KDL+
Sbjct: 219 LDYFLGYLSQYYEIVIFGSNYQMYSENTVGKLDPFHAYVSYALFREACRYKDGKLVKDLS 278
Query: 235 VLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSLISLLPFLDILAD--AEDVR 292
+L DL K +ID + +Q +N IP++ W D D +L+ L+PFL+ LA +DVR
Sbjct: 279 LLNRDLGKTVLIDVEEDSWSMQPDNAIPMKPW-DGSYDDTLVKLIPFLEYLATQPVKDVR 337
Query: 293 PII 295
PI+
Sbjct: 338 PIL 340
>sp|O13636|TIM50_SCHPO Mitochondrial import inner membrane translocase subunit tim50
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tim50 PE=3 SV=1
Length = 452
Score = 98.6 bits (244), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 89/175 (50%), Gaps = 17/175 (9%)
Query: 129 KSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEV 188
+ TLVL LD+ L+HS ++H +RP L FL ++ +EV
Sbjct: 175 RPYTLVLSLDDLLIHSEW---------------TRQHGWRTAKRPGLDYFLGYLSMYYEV 219
Query: 189 VIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDN 248
VIFT A ++D +DP IS + RES + G KDL+ L DL++V +ID
Sbjct: 220 VIFTRQYLATAKPIIDKIDPYHVSISAVLTRESSKYEKGKVIKDLSYLNRDLSRVIMIDT 279
Query: 249 SPQVFRLQVNNGIPIESWFDDPSDCSLISLLPFLDILA--DAEDVRPIIAKTFGN 301
+P+ + Q +N I + W +P D L+ L+P L+ +A D +DVRP++ G
Sbjct: 280 NPESWSKQPDNAIAMAPWTGNPKDKELVGLIPLLEFIAIMDIKDVRPVLKSYQGK 334
>sp|Q75A73|TIM50_ASHGO Mitochondrial import inner membrane translocase subunit TIM50
OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
FGSC 9923 / NRRL Y-1056) GN=TIM50 PE=3 SV=2
Length = 476
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 93/170 (54%), Gaps = 18/170 (10%)
Query: 128 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFE 187
++ +TLVL L++ VHS ++H +RP FL +++ +E
Sbjct: 188 QRPLTLVLPLEDFFVHSEW---------------TQQHGWRTAKRPGADYFLGYLSQYYE 232
Query: 188 VVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIID 247
+V+F+++ +Y+ ++++ LDP I+ ++++ C++ DG + KDL+ L DL K IID
Sbjct: 233 IVLFSSNYMVYSEKVVEKLDPIRAFITYNLFKDHCVYKDGIHIKDLSHLNRDLGKTLIID 292
Query: 248 NSPQVFRLQVNNGIPIESWFDDPSDCSLISLLPFLDILADA--EDVRPII 295
P +LQ+ N I E W D +D +L+ +PFL+ L DVRPI+
Sbjct: 293 TDPNSVKLQMENAILAEPW-DGKADDALLRYIPFLEYLVTQPINDVRPIL 341
>sp|Q6CDV7|TIM50_YARLI Mitochondrial import inner membrane translocase subunit TIM50
OS=Yarrowia lipolytica (strain CLIB 122 / E 150)
GN=TIM50 PE=3 SV=1
Length = 466
Score = 95.1 bits (235), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 17/170 (10%)
Query: 128 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFE 187
++ +TLV+ LD+ LVH +EH V +RP + FL + + +E
Sbjct: 190 QRPLTLVIALDDLLVHQEWS---------------REHGWRVAKRPGVDYFLGYLGQYYE 234
Query: 188 VVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIID 247
+V+F++ +L+ LDP S + RE + DG KDL+++ D+ K+ IID
Sbjct: 235 IVLFSSQYMANCEKLIMKLDPYHAWFSHVLTREHTTYEDGKLVKDLSLMNRDMGKIIIID 294
Query: 248 NSPQVFRLQVNNGIPIESWFDDPSDCSLISLLPFLDILA--DAEDVRPII 295
Q N IPIE W P D L+ L+PFL+ L + DVRPI+
Sbjct: 295 PDTGCTMKQPENSIPIEPWKGTPGDKELVKLIPFLEWLVSQNVNDVRPIL 344
>sp|Q5RAJ8|TIM50_PONAB Mitochondrial import inner membrane translocase subunit TIM50
OS=Pongo abelii GN=TIMM50 PE=2 SV=1
Length = 353
Score = 94.7 bits (234), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 92/166 (55%), Gaps = 18/166 (10%)
Query: 132 TLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIF 191
TLVL+L L+H LE+ + F K+RP ++T +++A ++E+VIF
Sbjct: 149 TLVLELTGVLLH--LEWSLATGWRF-------------KKRPGIETLFQQLAPLYEIVIF 193
Query: 192 TASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQ 251
T+ + A L+D +DP G IS R++R++ + DG + KD++ L D A+V ++D +
Sbjct: 194 TSETGMTAFPLIDSVDPHG-FISYRLFRDATRYMDGHHVKDISCLNRDPARVVVVDCKKE 252
Query: 252 VFRLQVNNGIPIESWFDDPSDCSLISLLPFLDILA--DAEDVRPII 295
FRLQ NG+ + W + D L+ L FL +A EDVR ++
Sbjct: 253 AFRLQPYNGVALRPWDGNSDDRVLLDLSAFLKTIALNGVEDVRTVL 298
>sp|Q3SZB3|TIM50_BOVIN Mitochondrial import inner membrane translocase subunit TIM50
OS=Bos taurus GN=TIMM50 PE=2 SV=1
Length = 355
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 88/166 (53%), Gaps = 18/166 (10%)
Query: 132 TLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIF 191
TLVL+L L+H F K+RP ++T +++A ++E+VIF
Sbjct: 151 TLVLELTGVLLHPEWSLATGWRF---------------KKRPGIETLFQQLAPLYEIVIF 195
Query: 192 TASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQ 251
T+ + A L+D +DP G IS R++R++ + DG + KD++ L D A+V ++D +
Sbjct: 196 TSETGMTAFPLIDSVDPHG-FISYRLFRDATRYMDGHHVKDISCLNRDPARVVVVDCKKE 254
Query: 252 VFRLQVNNGIPIESWFDDPSDCSLISLLPFLDILA--DAEDVRPII 295
FRLQ NG+ + W + D L+ L FL +A EDVR ++
Sbjct: 255 AFRLQPYNGVALRPWDGNSDDRVLLDLSAFLKTIALNGVEDVRTVL 300
>sp|Q3ZCQ8|TIM50_HUMAN Mitochondrial import inner membrane translocase subunit TIM50
OS=Homo sapiens GN=TIMM50 PE=1 SV=2
Length = 353
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 91/166 (54%), Gaps = 18/166 (10%)
Query: 132 TLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIF 191
TLVL+L L+H E+ + F K+RP ++T +++A ++E+VIF
Sbjct: 149 TLVLELTGVLLHP--EWSLATGWRF-------------KKRPGIETLFQQLAPLYEIVIF 193
Query: 192 TASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQ 251
T+ + A L+D +DP G IS R++R++ + DG + KD++ L D A+V ++D +
Sbjct: 194 TSETGMTAFPLIDSVDPHG-FISYRLFRDATRYMDGHHVKDISCLNRDPARVVVVDCKKE 252
Query: 252 VFRLQVNNGIPIESWFDDPSDCSLISLLPFLDILA--DAEDVRPII 295
FRLQ NG+ + W + D L+ L FL +A EDVR ++
Sbjct: 253 AFRLQPYNGVALRPWDGNSDDRVLLDLSAFLKTIALNGVEDVRTVL 298
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 111,772,462
Number of Sequences: 539616
Number of extensions: 4569629
Number of successful extensions: 10201
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 10053
Number of HSP's gapped (non-prelim): 86
length of query: 303
length of database: 191,569,459
effective HSP length: 117
effective length of query: 186
effective length of database: 128,434,387
effective search space: 23888795982
effective search space used: 23888795982
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)