Query 022087
Match_columns 303
No_of_seqs 241 out of 1166
Neff 6.5
Searched_HMMs 46136
Date Fri Mar 29 07:55:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022087.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022087hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1605 TFIIF-interacting CTD 100.0 1.3E-51 2.8E-56 378.9 13.1 183 119-301 78-262 (262)
2 TIGR02251 HIF-SF_euk Dullard-l 100.0 7.1E-43 1.5E-47 301.7 16.9 161 130-290 1-162 (162)
3 PF03031 NIF: NLI interacting 100.0 1.5E-40 3.3E-45 284.0 15.8 158 131-292 1-159 (159)
4 TIGR02245 HAD_IIID1 HAD-superf 100.0 5.2E-39 1.1E-43 285.1 14.5 159 126-300 17-193 (195)
5 KOG2832 TFIIF-interacting CTD 100.0 6.2E-34 1.3E-38 267.7 11.2 167 117-300 173-344 (393)
6 TIGR02250 FCP1_euk FCP1-like p 100.0 3.5E-33 7.7E-38 240.1 13.5 138 127-267 3-154 (156)
7 COG5190 FCP1 TFIIF-interacting 100.0 2E-30 4.2E-35 249.5 9.5 180 119-299 200-382 (390)
8 smart00577 CPDc catalytic doma 100.0 5.7E-28 1.2E-32 205.3 14.9 145 129-273 1-148 (148)
9 KOG0323 TFIIF-interacting CTD 99.9 7.9E-22 1.7E-26 199.4 10.1 135 129-266 145-296 (635)
10 TIGR01685 MDP-1 magnesium-depe 98.7 4.6E-08 9.9E-13 85.8 8.1 136 131-268 3-158 (174)
11 TIGR01681 HAD-SF-IIIC HAD-supe 98.6 2.7E-08 5.9E-13 82.5 4.1 111 131-253 1-121 (128)
12 PLN03243 haloacid dehalogenase 98.5 3.7E-08 8.1E-13 91.3 2.1 98 169-267 108-209 (260)
13 COG5190 FCP1 TFIIF-interacting 98.5 8.5E-08 1.9E-12 93.3 3.6 136 127-265 23-172 (390)
14 PRK13288 pyrophosphatase PpaX; 98.5 1.7E-07 3.7E-12 83.3 5.3 95 169-264 81-179 (214)
15 TIGR01993 Pyr-5-nucltdase pyri 98.5 4.2E-08 9.1E-13 85.2 1.2 92 169-263 83-181 (184)
16 TIGR01454 AHBA_synth_RP 3-amin 98.4 6.9E-08 1.5E-12 85.3 1.3 95 169-264 74-172 (205)
17 PRK11587 putative phosphatase; 98.4 2.5E-07 5.5E-12 82.7 3.6 96 169-266 82-181 (218)
18 PRK13225 phosphoglycolate phos 98.4 1.5E-07 3.3E-12 87.9 2.2 95 169-264 141-236 (273)
19 cd01427 HAD_like Haloacid deha 98.4 2.8E-07 6.1E-12 73.6 3.4 109 132-256 1-129 (139)
20 PRK14988 GMP/IMP nucleotidase; 98.4 1.2E-07 2.5E-12 85.8 0.9 93 169-262 92-188 (224)
21 PRK10725 fructose-1-P/6-phosph 98.3 7.4E-08 1.6E-12 83.5 -0.5 94 169-264 87-183 (188)
22 TIGR01662 HAD-SF-IIIA HAD-supe 98.3 4.9E-07 1.1E-11 74.4 4.4 114 131-262 1-126 (132)
23 PLN02575 haloacid dehalogenase 98.3 1.7E-07 3.6E-12 91.5 1.3 97 169-266 215-315 (381)
24 PRK13226 phosphoglycolate phos 98.3 7.6E-07 1.7E-11 80.4 4.7 95 169-264 94-192 (229)
25 COG0637 Predicted phosphatase/ 98.3 1.7E-07 3.8E-12 84.7 -0.2 99 169-268 85-187 (221)
26 TIGR01684 viral_ppase viral ph 98.2 3E-06 6.5E-11 79.8 7.9 73 128-222 124-198 (301)
27 COG4996 Predicted phosphatase 98.2 7.6E-06 1.7E-10 68.4 8.6 144 132-278 2-157 (164)
28 TIGR00338 serB phosphoserine p 98.2 2.9E-06 6.2E-11 75.5 6.6 97 169-267 84-194 (219)
29 PHA03398 viral phosphatase sup 98.2 6.5E-06 1.4E-10 77.7 9.1 123 127-272 125-283 (303)
30 TIGR00213 GmhB_yaeD D,D-heptos 98.2 3E-06 6.6E-11 73.6 6.3 115 131-263 2-146 (176)
31 TIGR01656 Histidinol-ppas hist 98.2 1.7E-06 3.7E-11 73.0 3.8 117 131-263 1-141 (147)
32 PHA02597 30.2 hypothetical pro 98.1 3.3E-07 7.2E-12 80.4 -1.1 96 169-266 73-173 (197)
33 TIGR01261 hisB_Nterm histidino 98.1 5.4E-06 1.2E-10 71.6 6.5 122 131-267 2-147 (161)
34 PLN02940 riboflavin kinase 98.1 5.2E-07 1.1E-11 88.2 0.1 96 169-265 92-192 (382)
35 TIGR03351 PhnX-like phosphonat 98.1 7.2E-07 1.6E-11 79.4 1.0 95 169-263 86-186 (220)
36 PF12689 Acid_PPase: Acid Phos 98.1 1.2E-05 2.6E-10 70.3 7.8 120 130-253 3-137 (169)
37 TIGR01686 FkbH FkbH-like domai 98.1 7.1E-06 1.5E-10 78.1 6.5 110 129-254 2-117 (320)
38 PRK10563 6-phosphogluconate ph 98.1 8E-07 1.7E-11 79.3 -0.0 95 169-266 87-185 (221)
39 PRK08942 D,D-heptose 1,7-bisph 98.0 1.3E-05 2.8E-10 69.7 7.0 117 130-263 3-143 (181)
40 TIGR01549 HAD-SF-IA-v1 haloaci 98.0 1.5E-06 3.2E-11 73.0 1.0 81 169-253 63-147 (154)
41 PHA02530 pseT polynucleotide k 98.0 6.5E-06 1.4E-10 77.0 4.2 128 128-266 156-295 (300)
42 PLN02919 haloacid dehalogenase 97.8 8E-06 1.7E-10 89.3 2.5 97 171-267 162-262 (1057)
43 TIGR01672 AphA HAD superfamily 97.8 2E-05 4.4E-10 72.3 4.7 132 127-263 60-207 (237)
44 PF13419 HAD_2: Haloacid dehal 97.8 1.9E-05 4.2E-10 66.0 4.0 94 168-262 75-172 (176)
45 TIGR01664 DNA-3'-Pase DNA 3'-p 97.8 6.6E-05 1.4E-09 65.1 6.5 107 130-250 13-137 (166)
46 PRK06698 bifunctional 5'-methy 97.7 6.1E-06 1.3E-10 82.3 -0.1 92 169-263 329-423 (459)
47 PRK06769 hypothetical protein; 97.7 5E-05 1.1E-09 66.1 4.9 116 131-264 5-134 (173)
48 KOG3109 Haloacid dehalogenase- 97.7 3.2E-05 6.9E-10 69.9 3.3 88 169-258 99-196 (244)
49 TIGR01509 HAD-SF-IA-v3 haloaci 97.7 4.5E-05 9.8E-10 65.1 4.0 92 169-262 84-179 (183)
50 COG0546 Gph Predicted phosphat 97.6 4.1E-05 8.9E-10 68.9 3.6 94 169-263 88-185 (220)
51 PLN02770 haloacid dehalogenase 97.6 8.2E-05 1.8E-09 68.1 5.2 97 169-266 107-207 (248)
52 TIGR02253 CTE7 HAD superfamily 97.6 5.7E-05 1.2E-09 67.0 3.9 95 169-264 93-192 (221)
53 TIGR01668 YqeG_hyp_ppase HAD s 97.6 8.2E-05 1.8E-09 64.5 4.7 109 128-265 23-134 (170)
54 PRK05446 imidazole glycerol-ph 97.6 0.0002 4.3E-09 69.5 7.7 121 129-264 1-145 (354)
55 TIGR01489 DKMTPPase-SF 2,3-dik 97.6 7.4E-05 1.6E-09 64.2 4.0 88 169-257 71-179 (188)
56 TIGR01449 PGP_bact 2-phosphogl 97.5 9.1E-05 2E-09 65.2 4.2 97 169-266 84-184 (213)
57 PF05152 DUF705: Protein of un 97.5 0.00036 7.9E-09 65.3 8.0 70 129-220 121-192 (297)
58 TIGR01428 HAD_type_II 2-haloal 97.5 9.7E-05 2.1E-09 64.7 4.0 94 169-263 91-188 (198)
59 PRK11009 aphA acid phosphatase 97.5 0.00031 6.7E-09 64.6 7.3 130 127-263 60-207 (237)
60 TIGR02254 YjjG/YfnB HAD superf 97.5 0.0001 2.2E-09 65.2 3.8 94 169-263 96-194 (224)
61 PRK13582 thrH phosphoserine ph 97.4 3.7E-05 8E-10 67.5 0.4 94 169-263 67-167 (205)
62 PRK09456 ?-D-glucose-1-phospha 97.4 0.00016 3.6E-09 63.6 4.0 100 169-268 83-186 (199)
63 TIGR01670 YrbI-phosphatas 3-de 97.4 0.00021 4.5E-09 61.0 4.4 112 131-263 2-115 (154)
64 PRK10826 2-deoxyglucose-6-phos 97.4 0.0002 4.3E-09 64.0 4.4 101 169-270 91-195 (222)
65 PRK09449 dUMP phosphatase; Pro 97.4 0.00018 3.9E-09 64.1 4.1 93 169-262 94-191 (224)
66 TIGR02009 PGMB-YQAB-SF beta-ph 97.3 0.00016 3.4E-09 62.2 2.8 92 169-263 87-182 (185)
67 PLN02954 phosphoserine phospha 97.3 0.00085 1.8E-08 59.7 7.1 92 169-262 83-191 (224)
68 TIGR01422 phosphonatase phosph 97.2 0.00035 7.6E-09 63.7 4.6 98 169-266 98-200 (253)
69 TIGR01689 EcbF-BcbF capsule bi 97.2 0.00083 1.8E-08 56.0 6.2 83 131-232 2-99 (126)
70 TIGR02137 HSK-PSP phosphoserin 97.2 0.00065 1.4E-08 60.8 5.3 91 169-263 67-167 (203)
71 PRK08238 hypothetical protein; 97.1 0.0014 3E-08 66.2 8.1 90 169-264 71-165 (479)
72 PRK11133 serB phosphoserine ph 97.1 0.00085 1.8E-08 64.3 6.0 95 169-264 180-288 (322)
73 TIGR01663 PNK-3'Pase polynucle 97.1 0.0011 2.3E-08 67.6 6.8 110 128-251 166-295 (526)
74 PRK13222 phosphoglycolate phos 97.0 0.00074 1.6E-08 59.9 4.5 93 169-262 92-188 (226)
75 PRK13223 phosphoglycolate phos 97.0 0.00083 1.8E-08 62.5 4.6 94 169-263 100-197 (272)
76 TIGR01491 HAD-SF-IB-PSPlk HAD- 97.0 0.0015 3.2E-08 56.8 5.7 94 169-263 79-186 (201)
77 PRK13478 phosphonoacetaldehyde 96.9 0.0012 2.7E-08 60.8 5.3 98 169-266 100-202 (267)
78 PLN02779 haloacid dehalogenase 96.9 0.0011 2.5E-08 62.1 4.8 97 169-266 143-245 (286)
79 TIGR02247 HAD-1A3-hyp Epoxide 96.9 0.00046 9.9E-09 61.0 1.8 98 169-267 93-196 (211)
80 TIGR01691 enolase-ppase 2,3-di 96.8 0.0012 2.6E-08 59.9 4.1 95 169-264 94-193 (220)
81 TIGR01459 HAD-SF-IIA-hyp4 HAD- 96.8 0.0024 5.3E-08 58.1 5.9 94 131-250 9-105 (242)
82 TIGR02252 DREG-2 REG-2-like, H 96.8 0.0015 3.2E-08 57.3 4.3 91 170-262 105-200 (203)
83 TIGR01990 bPGM beta-phosphoglu 96.8 0.0011 2.3E-08 57.0 3.2 92 169-263 86-181 (185)
84 PRK09484 3-deoxy-D-manno-octul 96.8 0.0023 5E-08 56.1 5.3 115 129-264 20-136 (183)
85 COG1011 Predicted hydrolase (H 96.8 0.0023 5.1E-08 56.7 5.3 93 169-262 98-194 (229)
86 TIGR01548 HAD-SF-IA-hyp1 haloa 96.6 0.004 8.8E-08 54.5 6.0 81 171-253 107-191 (197)
87 PLN02811 hydrolase 96.5 0.0017 3.6E-08 58.1 2.9 97 169-266 77-183 (220)
88 TIGR01533 lipo_e_P4 5'-nucleot 96.5 0.0019 4.2E-08 60.4 3.1 92 128-220 73-172 (266)
89 COG0560 SerB Phosphoserine pho 96.5 0.002 4.4E-08 58.1 3.0 94 169-263 76-185 (212)
90 KOG2914 Predicted haloacid-hal 96.3 0.00084 1.8E-08 61.2 -0.3 98 168-266 90-195 (222)
91 PTZ00445 p36-lilke protein; Pr 96.3 0.0042 9E-08 56.2 4.1 133 126-267 39-205 (219)
92 PRK09552 mtnX 2-hydroxy-3-keto 96.0 0.016 3.4E-07 51.9 6.4 96 169-264 73-184 (219)
93 TIGR01493 HAD-SF-IA-v2 Haloaci 95.9 0.0023 4.9E-08 54.7 0.4 77 169-252 89-168 (175)
94 COG0241 HisB Histidinol phosph 95.7 0.021 4.6E-07 50.5 5.4 126 130-269 5-154 (181)
95 PF13344 Hydrolase_6: Haloacid 95.6 0.021 4.6E-07 45.4 4.8 50 133-206 1-51 (101)
96 COG0561 Cof Predicted hydrolas 95.6 0.038 8.2E-07 50.6 7.2 58 130-210 3-61 (264)
97 TIGR02726 phenyl_P_delta pheny 95.5 0.028 6.1E-07 49.0 5.6 115 130-265 7-123 (169)
98 PRK00192 mannosyl-3-phosphogly 95.4 0.043 9.2E-07 50.8 6.9 57 130-209 4-61 (273)
99 PF08282 Hydrolase_3: haloacid 95.4 0.039 8.5E-07 48.6 6.3 54 133-209 1-55 (254)
100 TIGR03333 salvage_mtnX 2-hydro 95.4 0.035 7.5E-07 49.5 5.8 94 168-261 68-177 (214)
101 PF08645 PNK3P: Polynucleotide 95.3 0.022 4.9E-07 49.0 4.2 107 131-252 1-130 (159)
102 TIGR01544 HAD-SF-IE haloacid d 95.2 0.047 1E-06 51.4 6.3 105 168-273 119-248 (277)
103 COG3882 FkbH Predicted enzyme 95.2 0.031 6.8E-07 56.0 5.2 133 127-269 219-357 (574)
104 COG2179 Predicted hydrolase of 95.1 0.028 6.1E-07 49.0 4.1 118 121-267 19-141 (175)
105 PRK03669 mannosyl-3-phosphogly 95.1 0.075 1.6E-06 49.1 7.3 59 128-209 5-64 (271)
106 PF09419 PGP_phosphatase: Mito 94.9 0.059 1.3E-06 47.1 5.8 97 125-251 36-147 (168)
107 TIGR01487 SPP-like sucrose-pho 94.9 0.072 1.6E-06 47.2 6.5 57 131-210 2-59 (215)
108 PRK10513 sugar phosphate phosp 94.7 0.086 1.9E-06 48.2 6.8 57 130-209 3-60 (270)
109 TIGR02461 osmo_MPG_phos mannos 94.7 0.082 1.8E-06 47.9 6.3 53 133-209 2-55 (225)
110 PRK10530 pyridoxal phosphate ( 94.6 0.11 2.4E-06 47.3 7.1 57 130-209 3-60 (272)
111 PF11019 DUF2608: Protein of u 94.4 0.039 8.5E-07 51.1 3.7 100 168-267 79-209 (252)
112 PRK01158 phosphoglycolate phos 94.4 0.13 2.8E-06 45.8 6.9 57 131-210 4-61 (230)
113 PRK10748 flavin mononucleotide 94.4 0.027 5.8E-07 51.1 2.4 89 169-263 112-204 (238)
114 TIGR00099 Cof-subfamily Cof su 94.3 0.12 2.5E-06 47.1 6.5 54 133-209 2-56 (256)
115 PRK10976 putative hydrolase; P 94.1 0.15 3.2E-06 46.6 6.8 56 131-209 3-59 (266)
116 PRK15126 thiamin pyrimidine py 94.1 0.15 3.2E-06 47.0 6.7 57 131-210 3-60 (272)
117 smart00775 LNS2 LNS2 domain. T 94.0 0.13 2.8E-06 44.1 5.9 61 133-206 2-67 (157)
118 TIGR01488 HAD-SF-IB Haloacid D 94.0 0.19 4E-06 42.6 6.8 84 169-253 72-171 (177)
119 TIGR02463 MPGP_rel mannosyl-3- 94.0 0.11 2.4E-06 46.1 5.6 54 133-209 2-56 (221)
120 PRK10444 UMP phosphatase; Prov 93.6 0.11 2.3E-06 48.0 5.0 53 131-207 2-55 (248)
121 TIGR01486 HAD-SF-IIB-MPGP mann 93.6 0.18 3.8E-06 46.1 6.3 54 133-209 2-56 (256)
122 TIGR01456 CECR5 HAD-superfamil 93.4 0.13 2.8E-06 49.0 5.3 53 131-207 1-62 (321)
123 TIGR01482 SPP-subfamily Sucros 93.2 0.23 5E-06 43.9 6.2 53 133-208 1-54 (225)
124 TIGR01490 HAD-SF-IB-hyp1 HAD-s 93.1 0.13 2.9E-06 44.7 4.5 86 169-255 86-186 (202)
125 COG4502 5'(3')-deoxyribonucleo 93.0 0.28 6E-06 42.0 5.9 85 169-268 67-155 (180)
126 TIGR01484 HAD-SF-IIB HAD-super 93.0 0.18 3.8E-06 44.1 5.1 53 133-207 2-55 (204)
127 PRK10187 trehalose-6-phosphate 92.9 0.23 5E-06 46.1 6.0 60 129-206 13-74 (266)
128 TIGR01458 HAD-SF-IIA-hyp3 HAD- 92.7 0.14 3.1E-06 47.2 4.3 47 131-197 2-49 (257)
129 PLN02645 phosphoglycolate phos 92.5 0.18 3.9E-06 47.8 4.7 52 131-206 29-81 (311)
130 PTZ00174 phosphomannomutase; P 92.5 0.32 6.9E-06 44.4 6.2 52 130-204 5-57 (247)
131 PRK12702 mannosyl-3-phosphogly 92.3 0.37 8.1E-06 45.9 6.6 57 131-210 2-59 (302)
132 TIGR01452 PGP_euk phosphoglyco 91.9 0.25 5.4E-06 46.0 4.8 41 131-195 3-44 (279)
133 PLN02423 phosphomannomutase 91.1 0.53 1.2E-05 43.1 6.1 55 128-208 5-59 (245)
134 TIGR01457 HAD-SF-IIA-hyp2 HAD- 90.5 0.44 9.5E-06 43.7 4.9 53 132-208 3-59 (249)
135 TIGR01485 SPP_plant-cyano sucr 90.2 0.58 1.3E-05 42.5 5.5 60 130-209 1-61 (249)
136 TIGR02244 HAD-IG-Ncltidse HAD 90.0 0.62 1.3E-05 45.3 5.7 53 166-218 180-240 (343)
137 PLN02887 hydrolase family prot 89.8 0.76 1.7E-05 47.6 6.5 58 129-209 307-365 (580)
138 COG0647 NagD Predicted sugar p 89.8 0.45 9.8E-06 44.7 4.5 53 130-206 8-61 (269)
139 PRK14502 bifunctional mannosyl 89.4 1 2.3E-05 47.4 7.1 61 126-209 412-473 (694)
140 TIGR01675 plant-AP plant acid 87.7 0.7 1.5E-05 42.4 4.2 90 127-220 74-172 (229)
141 TIGR01511 ATPase-IB1_Cu copper 87.7 1.3 2.7E-05 45.7 6.5 86 168-263 403-489 (562)
142 TIGR01460 HAD-SF-IIA Haloacid 87.3 0.72 1.6E-05 41.9 4.0 50 133-206 1-55 (236)
143 PLN02151 trehalose-phosphatase 87.0 1.2 2.6E-05 43.4 5.5 60 127-204 95-154 (354)
144 COG2503 Predicted secreted aci 87.0 0.28 6.1E-06 45.4 1.1 80 126-206 75-160 (274)
145 PF00702 Hydrolase: haloacid d 86.8 1.1 2.3E-05 38.8 4.7 80 168-251 125-206 (215)
146 PLN02580 trehalose-phosphatase 86.6 1.3 2.8E-05 43.7 5.5 61 127-205 116-176 (384)
147 COG4359 Uncharacterized conser 86.4 1.9 4.2E-05 38.5 5.9 42 169-210 72-114 (220)
148 COG1877 OtsB Trehalose-6-phosp 86.3 1.3 2.7E-05 41.6 5.1 61 126-204 14-76 (266)
149 TIGR00685 T6PP trehalose-phosp 86.1 0.71 1.5E-05 42.0 3.3 48 129-194 2-51 (244)
150 PLN03017 trehalose-phosphatase 85.3 1.7 3.6E-05 42.6 5.6 61 127-205 108-168 (366)
151 TIGR01548 HAD-SF-IA-hyp1 haloa 83.9 0.49 1.1E-05 41.3 1.1 14 132-145 2-15 (197)
152 PF03767 Acid_phosphat_B: HAD 83.7 0.18 4E-06 46.0 -1.8 75 128-206 70-152 (229)
153 PF06941 NT5C: 5' nucleotidase 83.5 0.84 1.8E-05 39.9 2.4 80 169-264 72-159 (191)
154 KOG3120 Predicted haloacid deh 82.9 0.64 1.4E-05 42.6 1.4 48 169-217 83-132 (256)
155 PRK11590 hypothetical protein; 81.8 0.86 1.9E-05 40.5 1.9 39 169-207 94-134 (211)
156 TIGR02253 CTE7 HAD superfamily 81.0 0.88 1.9E-05 40.0 1.6 16 131-146 3-18 (221)
157 TIGR02009 PGMB-YQAB-SF beta-ph 80.1 0.88 1.9E-05 38.7 1.3 16 131-146 2-17 (185)
158 TIGR01422 phosphonatase phosph 79.8 1 2.3E-05 40.8 1.7 15 131-145 3-17 (253)
159 TIGR01525 ATPase-IB_hvy heavy 79.4 4.1 8.9E-05 41.8 6.1 87 168-263 382-470 (556)
160 PLN02770 haloacid dehalogenase 79.3 1 2.3E-05 41.0 1.6 17 130-146 22-38 (248)
161 PRK13478 phosphonoacetaldehyde 79.2 1 2.2E-05 41.3 1.5 16 130-145 4-19 (267)
162 TIGR02252 DREG-2 REG-2-like, H 79.2 0.99 2.1E-05 39.3 1.3 14 132-145 2-15 (203)
163 PRK13223 phosphoglycolate phos 78.4 1.2 2.6E-05 41.3 1.8 16 130-145 13-28 (272)
164 PRK10748 flavin mononucleotide 78.4 1.2 2.5E-05 40.3 1.6 15 131-145 11-25 (238)
165 PRK11590 hypothetical protein; 77.5 3.6 7.8E-05 36.5 4.4 17 129-145 5-21 (211)
166 PLN02779 haloacid dehalogenase 77.3 1.3 2.9E-05 41.4 1.7 17 129-145 39-55 (286)
167 TIGR01990 bPGM beta-phosphoglu 76.7 1.2 2.5E-05 37.9 1.0 15 132-146 1-15 (185)
168 PRK14501 putative bifunctional 76.3 4.9 0.00011 42.6 5.8 62 127-206 489-552 (726)
169 TIGR01512 ATPase-IB2_Cd heavy 76.2 2.5 5.4E-05 43.2 3.5 87 168-263 360-448 (536)
170 TIGR01449 PGP_bact 2-phosphogl 75.7 1.1 2.3E-05 39.2 0.5 14 133-146 1-14 (213)
171 COG3769 Predicted hydrolase (H 75.6 9.4 0.0002 35.2 6.5 58 130-211 7-65 (274)
172 TIGR01493 HAD-SF-IA-v2 Haloaci 74.9 1.4 3.1E-05 37.2 1.1 13 133-145 2-14 (175)
173 TIGR01545 YfhB_g-proteo haloac 74.7 6.9 0.00015 34.9 5.5 38 169-206 93-132 (210)
174 PRK10826 2-deoxyglucose-6-phos 74.6 1.8 3.9E-05 38.3 1.7 16 130-145 7-22 (222)
175 TIGR02247 HAD-1A3-hyp Epoxide 74.4 1.8 3.8E-05 38.0 1.6 15 131-145 3-17 (211)
176 TIGR02254 YjjG/YfnB HAD superf 74.4 1.6 3.4E-05 38.3 1.3 16 131-146 2-17 (224)
177 KOG3085 Predicted hydrolase (H 74.4 2.2 4.8E-05 39.4 2.3 92 168-262 112-208 (237)
178 TIGR01428 HAD_type_II 2-haloal 74.2 1.6 3.5E-05 37.8 1.3 15 131-145 2-16 (198)
179 PF05116 S6PP: Sucrose-6F-phos 73.9 4.9 0.00011 36.8 4.5 55 129-207 1-57 (247)
180 TIGR01491 HAD-SF-IB-PSPlk HAD- 73.4 2 4.3E-05 36.9 1.7 16 130-145 4-19 (201)
181 PRK09449 dUMP phosphatase; Pro 72.9 1.8 3.8E-05 38.3 1.2 14 131-144 4-17 (224)
182 PRK13222 phosphoglycolate phos 72.7 1.8 4E-05 38.0 1.3 15 131-145 7-21 (226)
183 TIGR02471 sucr_syn_bact_C sucr 72.6 6.1 0.00013 35.4 4.7 52 133-208 2-53 (236)
184 PF13419 HAD_2: Haloacid dehal 70.9 2.1 4.5E-05 35.2 1.1 14 133-146 1-14 (176)
185 TIGR01509 HAD-SF-IA-v3 haloaci 69.8 2 4.4E-05 36.1 0.9 14 133-146 2-15 (183)
186 PF08235 LNS2: LNS2 (Lipin/Ned 67.0 13 0.00028 32.2 5.2 62 133-206 2-64 (157)
187 PF06888 Put_Phosphatase: Puta 65.0 15 0.00032 33.8 5.5 49 169-218 70-121 (234)
188 PF12710 HAD: haloacid dehalog 64.5 7 0.00015 33.1 3.2 47 171-217 86-138 (192)
189 TIGR01680 Veg_Stor_Prot vegeta 64.2 9.7 0.00021 35.9 4.2 88 129-220 100-197 (275)
190 PF02358 Trehalose_PPase: Treh 62.5 11 0.00025 33.8 4.3 51 134-202 1-53 (235)
191 PLN02382 probable sucrose-phos 61.5 21 0.00045 35.5 6.3 17 128-144 7-23 (413)
192 PRK09552 mtnX 2-hydroxy-3-keto 59.4 5 0.00011 35.6 1.4 16 130-145 3-18 (219)
193 PLN02205 alpha,alpha-trehalose 59.3 17 0.00037 39.6 5.6 59 127-205 593-653 (854)
194 PLN03063 alpha,alpha-trehalose 58.6 19 0.00042 38.8 5.9 64 127-205 504-569 (797)
195 PF05822 UMPH-1: Pyrimidine 5' 56.4 14 0.0003 34.4 3.7 98 168-265 88-209 (246)
196 PRK09456 ?-D-glucose-1-phospha 55.9 6.4 0.00014 34.3 1.5 14 132-145 2-15 (199)
197 PF08484 Methyltransf_14: C-me 55.6 39 0.00084 29.1 6.2 65 171-266 53-119 (160)
198 TIGR01545 YfhB_g-proteo haloac 54.9 6.7 0.00015 35.0 1.5 16 130-145 5-20 (210)
199 COG1011 Predicted hydrolase (H 54.6 7.2 0.00016 34.1 1.6 17 130-146 4-20 (229)
200 PLN03064 alpha,alpha-trehalose 50.8 32 0.0007 37.9 6.0 71 127-206 588-660 (934)
201 PRK10671 copA copper exporting 45.2 22 0.00048 38.4 3.7 86 169-263 649-735 (834)
202 PF12710 HAD: haloacid dehalog 44.8 12 0.00026 31.7 1.4 13 133-145 1-13 (192)
203 cd06537 CIDE_N_B CIDE_N domain 42.8 42 0.00091 25.9 3.9 16 130-145 39-54 (81)
204 TIGR01490 HAD-SF-IB-hyp1 HAD-s 41.8 13 0.00027 32.1 1.1 13 133-145 2-14 (202)
205 KOG4549 Magnesium-dependent ph 41.6 1.2E+02 0.0026 25.6 6.7 120 129-251 4-133 (144)
206 KOG2134 Polynucleotide kinase 41.1 48 0.001 32.9 5.0 57 128-195 73-130 (422)
207 cd06539 CIDE_N_A CIDE_N domain 40.6 48 0.001 25.4 3.9 16 130-145 40-55 (78)
208 COG4229 Predicted enolase-phos 40.5 27 0.00059 31.3 2.9 92 169-262 102-199 (229)
209 PLN02177 glycerol-3-phosphate 38.4 26 0.00057 35.7 2.9 23 187-209 124-147 (497)
210 PF05761 5_nucleotid: 5' nucle 37.7 55 0.0012 33.0 5.0 53 166-218 179-240 (448)
211 cd06536 CIDE_N_ICAD CIDE_N dom 37.4 57 0.0012 25.1 3.9 17 129-145 41-57 (80)
212 smart00266 CAD Domains present 37.4 52 0.0011 25.0 3.6 16 130-145 38-53 (74)
213 TIGR02826 RNR_activ_nrdG3 anae 36.6 81 0.0018 26.7 5.2 71 158-248 65-137 (147)
214 cd06538 CIDE_N_FSP27 CIDE_N do 36.2 54 0.0012 25.2 3.6 16 130-145 39-54 (79)
215 cd01615 CIDE_N CIDE_N domain, 35.2 60 0.0013 24.9 3.7 17 129-145 39-55 (78)
216 KOG3189 Phosphomannomutase [Li 34.4 63 0.0014 29.5 4.3 58 127-207 8-70 (252)
217 PF02017 CIDE-N: CIDE-N domain 33.6 33 0.00072 26.2 2.1 17 129-145 39-55 (78)
218 PF06941 NT5C: 5' nucleotidase 31.7 29 0.00063 30.1 1.7 16 130-145 2-17 (191)
219 COG3700 AphA Acid phosphatase 31.3 40 0.00087 30.2 2.5 125 126-274 59-197 (237)
220 PF00702 Hydrolase: haloacid d 31.3 29 0.00063 29.7 1.7 14 132-145 3-16 (215)
221 PLN02499 glycerol-3-phosphate 28.9 35 0.00075 34.9 1.9 23 187-209 110-133 (498)
222 KOG1615 Phosphoserine phosphat 26.7 1.2E+02 0.0025 27.7 4.6 87 169-256 87-189 (227)
223 PF06888 Put_Phosphatase: Puta 25.2 25 0.00054 32.3 0.1 14 132-145 2-15 (234)
224 cd02514 GT13_GLCNAC-TI GT13_GL 24.7 84 0.0018 30.5 3.6 102 167-268 6-139 (334)
225 KOG1431 GDP-L-fucose synthetas 24.4 79 0.0017 29.6 3.2 73 156-234 199-279 (315)
226 cd06535 CIDE_N_CAD CIDE_N doma 21.3 1.3E+02 0.0029 23.0 3.4 13 130-142 40-52 (77)
227 PRK11033 zntA zinc/cadmium/mer 20.8 2.8E+02 0.0061 29.7 7.0 76 167-253 565-641 (741)
No 1
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=100.00 E-value=1.3e-51 Score=378.85 Aligned_cols=183 Identities=58% Similarity=0.950 Sum_probs=174.6
Q ss_pred CCCCCccCCCCceEEEEecCccccccc--ccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhcceEEEEEcCCcH
Q 022087 119 TASPKETQGRKSVTLVLDLDETLVHST--LEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQS 196 (303)
Q Consensus 119 ~l~p~~~~~~~k~tLVLDLDeTLvhs~--~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~~~yEivIfTas~~ 196 (303)
.++|......+|+||||||||||+||+ .++...+|+.+++.+++..+.+||.+|||+++||++++++||++||||+.+
T Consensus 78 ~~~~~~~~~~~kk~lVLDLDeTLvHss~~~~~~~~~d~~~~v~~~~~~~~~yV~kRP~vdeFL~~~s~~~e~v~FTAs~~ 157 (262)
T KOG1605|consen 78 PVLPLRLATVGRKTLVLDLDETLVHSSLNLKPIVNADFTVPVEIDGHIHQVYVRKRPHVDEFLSRVSKWYELVLFTASLE 157 (262)
T ss_pred ccCCcccccCCCceEEEeCCCcccccccccCCCCCcceeeeeeeCCcceEEEEEcCCCHHHHHHHhHHHHHHHHHHhhhH
Confidence 344555568899999999999999999 677788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCceeeeEeeccceecCCcccccccccCCCCCcEEEEECChhhhccCCCceeeeccccCCCCchHHH
Q 022087 197 IYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSLI 276 (303)
Q Consensus 197 ~YA~~il~~LDp~~~~f~~rl~R~~c~~~~g~~~KDL~~Lgrdl~~vIIIDDs~~~~~~~~~N~I~I~~f~~d~~D~eLl 276 (303)
.||++|++.|||.+++|++|+||++|.+.+|+|+|||+.+|+++++||||||+|.+|.+||+|||||++|++++.|+||+
T Consensus 158 ~Ya~~v~D~LD~~~~i~~~RlyR~~C~~~~g~yvKdls~~~~dL~~viIiDNsP~sy~~~p~NgIpI~sw~~d~~D~eLL 237 (262)
T KOG1605|consen 158 VYADPLLDILDPDRKIISHRLYRDSCTLKDGNYVKDLSVLGRDLSKVIIVDNSPQSYRLQPENGIPIKSWFDDPTDTELL 237 (262)
T ss_pred HHHHHHHHHccCCCCeeeeeecccceEeECCcEEEEcceeccCcccEEEEcCChHHhccCccCCCcccccccCCChHHHH
Confidence 99999999999988899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCCCcHHHHHhhhCC
Q 022087 277 SLLPFLDILADAEDVRPIIAKTFGN 301 (303)
Q Consensus 277 ~Ll~~Le~L~~~~DVR~~l~~~f~~ 301 (303)
+|+|||+.|+.++|||++++++|++
T Consensus 238 ~LlpfLe~L~~~~Dvr~~l~~~~~~ 262 (262)
T KOG1605|consen 238 KLLPFLEALAFVDDVRPILARRFGN 262 (262)
T ss_pred HHHHHHHHhcccccHHHHHHHhhcC
Confidence 9999999999999999999999974
No 2
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=100.00 E-value=7.1e-43 Score=301.70 Aligned_cols=161 Identities=57% Similarity=0.931 Sum_probs=153.5
Q ss_pred ceEEEEecCcccccccccccC-CCCceeEEEecceeeeEEEeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCC
Q 022087 130 SVTLVLDLDETLVHSTLEYCD-DADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDP 208 (303)
Q Consensus 130 k~tLVLDLDeTLvhs~~~~~~-~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~~~yEivIfTas~~~YA~~il~~LDp 208 (303)
|+|||||||||||||++.+.. .+++.+.+..++....+||++|||+.+||++|+++|||+|||++.+.||++|++.|||
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~ldp 80 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDILDR 80 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHHHCc
Confidence 579999999999999888765 6788888888888889999999999999999999999999999999999999999999
Q ss_pred CCCceeeeEeeccceecCCcccccccccCCCCCcEEEEECChhhhccCCCceeeeccccCCCCchHHHHHHHHHHhccCC
Q 022087 209 DGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSLISLLPFLDILADA 288 (303)
Q Consensus 209 ~~~~f~~rl~R~~c~~~~g~~~KDL~~Lgrdl~~vIIIDDs~~~~~~~~~N~I~I~~f~~d~~D~eLl~Ll~~Le~L~~~ 288 (303)
.+.+|+++++|++|...+|.|.|||+.+|++++++|+|||++..|..|++|||+|.+|.|+.+|++|.+|++||+.|+.+
T Consensus 81 ~~~~f~~~l~r~~~~~~~~~~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~~f~~~~~D~~L~~l~~~L~~l~~~ 160 (162)
T TIGR02251 81 GGKVISRRLYRESCVFTNGKYVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIKSWFGDPNDTELLNLIPFLEGLRFE 160 (162)
T ss_pred CCCEEeEEEEccccEEeCCCEEeEchhcCCChhhEEEEeCChhhhccCccCEeecCCCCCCCCHHHHHHHHHHHHHHhcc
Confidence 98899999999999998899999999999999999999999999999999999999999999999999999999999998
Q ss_pred CC
Q 022087 289 ED 290 (303)
Q Consensus 289 ~D 290 (303)
+|
T Consensus 161 ~~ 162 (162)
T TIGR02251 161 DD 162 (162)
T ss_pred CC
Confidence 76
No 3
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=100.00 E-value=1.5e-40 Score=284.00 Aligned_cols=158 Identities=51% Similarity=0.856 Sum_probs=130.3
Q ss_pred eEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCCCC
Q 022087 131 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDG 210 (303)
Q Consensus 131 ~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~~~yEivIfTas~~~YA~~il~~LDp~~ 210 (303)
+||||||||||+|+........++... + ....++|++|||+++||++++++|||+|||++++.||++|++.|||.+
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~---~-~~~~~~v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~ldp~~ 76 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKII---D-QRGGYYVKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDALDPNG 76 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEE---T-EEEEEEEEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHHHTTTT
T ss_pred CEEEEeCCCcEEEEeecCCCCccccee---c-cccceeEeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHhhhhhc
Confidence 699999999999998766554333322 2 456789999999999999999999999999999999999999999988
Q ss_pred CceeeeEeeccceecCCcccccccccCCCCCcEEEEECChhhhccCCCceeeeccccCC-CCchHHHHHHHHHHhccCCC
Q 022087 211 KLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDD-PSDCSLISLLPFLDILADAE 289 (303)
Q Consensus 211 ~~f~~rl~R~~c~~~~g~~~KDL~~Lgrdl~~vIIIDDs~~~~~~~~~N~I~I~~f~~d-~~D~eLl~Ll~~Le~L~~~~ 289 (303)
.+|+++++|++|....|.++|||+.+|+++++||||||++.+|..+++|+|+|++|.++ ++|++|.+|++||++|+.++
T Consensus 77 ~~~~~~~~r~~~~~~~~~~~KdL~~l~~~~~~vvivDD~~~~~~~~~~N~i~v~~f~~~~~~D~~L~~l~~~L~~l~~~~ 156 (159)
T PF03031_consen 77 KLFSRRLYRDDCTFDKGSYIKDLSKLGRDLDNVVIVDDSPRKWALQPDNGIPVPPFFGDTPNDRELLRLLPFLEELAKED 156 (159)
T ss_dssp SSEEEEEEGGGSEEETTEEE--GGGSSS-GGGEEEEES-GGGGTTSGGGEEE----SSCHTT--HHHHHHHHHHHHHTHS
T ss_pred cccccccccccccccccccccchHHHhhccccEEEEeCCHHHeeccCCceEEeccccCCCcchhHHHHHHHHHHHhCccc
Confidence 89999999999998888889999999999999999999999999999999999999999 89999999999999999999
Q ss_pred CcH
Q 022087 290 DVR 292 (303)
Q Consensus 290 DVR 292 (303)
|||
T Consensus 157 Dvr 159 (159)
T PF03031_consen 157 DVR 159 (159)
T ss_dssp -CH
T ss_pred CCC
Confidence 998
No 4
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=100.00 E-value=5.2e-39 Score=285.07 Aligned_cols=159 Identities=23% Similarity=0.279 Sum_probs=136.8
Q ss_pred CCCCceEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHH
Q 022087 126 QGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDI 205 (303)
Q Consensus 126 ~~~~k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~~~yEivIfTas~~~YA~~il~~ 205 (303)
.+.+|+||||||||||||+... ...+++.+|||+++||++++++|||+||||+++.||+++++.
T Consensus 17 ~~~~kklLVLDLDeTLvh~~~~----------------~~~~~~~kRP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~ 80 (195)
T TIGR02245 17 PREGKKLLVLDIDYTLFDHRSP----------------AETGEELMRPYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTE 80 (195)
T ss_pred CCCCCcEEEEeCCCceEccccc----------------CCCceEEeCCCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHH
Confidence 4577899999999999997421 113578999999999999999999999999999999999999
Q ss_pred hCCCC-CceeeeEeeccce------ecCCc-ccccccccC------CCCCcEEEEECChhhhccCCCceeeeccccC---
Q 022087 206 LDPDG-KLISRRVYRESCI------FSDGT-YTKDLTVLG------VDLAKVAIIDNSPQVFRLQVNNGIPIESWFD--- 268 (303)
Q Consensus 206 LDp~~-~~f~~rl~R~~c~------~~~g~-~~KDL~~Lg------rdl~~vIIIDDs~~~~~~~~~N~I~I~~f~~--- 268 (303)
|++.+ ..+..++++++|. ...|. ++|||+.++ .++++||||||+|.++.+||+|||+|++|++
T Consensus 81 l~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKdL~~lw~~l~~~~~~~ntiiVDd~p~~~~~~P~N~i~I~~f~~~~~ 160 (195)
T TIGR02245 81 LGVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKPLGVIWALLPEFYSMKNTIMFDDLRRNFLMNPQNGLKIRPFKKAHA 160 (195)
T ss_pred hcccCCccceEEEEeccccceeeEeeccCcEEEeecHHhhhhcccCCCcccEEEEeCCHHHHhcCCCCccccCCccccCC
Confidence 98643 2356677778883 23454 499999873 3889999999999999999999999999985
Q ss_pred -CCCchHHHHHHHHHHhccCCCCcHHHHHhhhC
Q 022087 269 -DPSDCSLISLLPFLDILADAEDVRPIIAKTFG 300 (303)
Q Consensus 269 -d~~D~eLl~Ll~~Le~L~~~~DVR~~l~~~f~ 300 (303)
+.+|+||++|++||+.|+.++|||++.+++|.
T Consensus 161 ~~~~D~eL~~L~~yL~~la~~~Dvr~~~~~~w~ 193 (195)
T TIGR02245 161 NRGTDQELLKLTQYLKTIAELEDFSSLDHKEWE 193 (195)
T ss_pred CCcccHHHHHHHHHHHHHhcCcccchhhhcccc
Confidence 57899999999999999999999999998885
No 5
>KOG2832 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=100.00 E-value=6.2e-34 Score=267.73 Aligned_cols=167 Identities=35% Similarity=0.660 Sum_probs=154.2
Q ss_pred CCCCCCC---ccCCCCceEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhcceEEEEEcC
Q 022087 117 RPTASPK---ETQGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTA 193 (303)
Q Consensus 117 ~~~l~p~---~~~~~~k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~~~yEivIfTa 193 (303)
++.|+|. +|..++++||||+|.++|||..|.. ..+|.+++|||++.||.+++++|||||||+
T Consensus 173 ~~~LLPdpl~pPy~Qp~yTLVleledvLVhpdws~---------------~tGwRf~kRPgvD~FL~~~a~~yEIVi~ss 237 (393)
T KOG2832|consen 173 RAKLLPDPLPPPYEQPPYTLVLELEDVLVHPDWSY---------------KTGWRFKKRPGVDYFLGHLAKYYEIVVYSS 237 (393)
T ss_pred hhhhCCCCCCCcccCCCceEEEEeeeeEeccchhh---------------hcCceeccCchHHHHHHhhcccceEEEEec
Confidence 3444444 4678899999999999999998864 356899999999999999999999999999
Q ss_pred CcHHHHHHHHHHhCCCCCceeeeEeeccceecCCcccccccccCCCCCcEEEEECChhhhccCCCceeeeccccCCCCch
Q 022087 194 SQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDC 273 (303)
Q Consensus 194 s~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~g~~~KDL~~Lgrdl~~vIIIDDs~~~~~~~~~N~I~I~~f~~d~~D~ 273 (303)
....||.++++.|||.| +|+++|+|++|.+.+|+.+|||+.|+||+++||+||-.+.++.+||+|.|++++|.|+.+|+
T Consensus 238 e~gmt~~pl~d~lDP~g-~IsYkLfr~~t~y~~G~HvKdls~LNRdl~kVivVd~d~~~~~l~P~N~l~l~~W~Gn~dDt 316 (393)
T KOG2832|consen 238 EQGMTVFPLLDALDPKG-YISYKLFRGATKYEEGHHVKDLSKLNRDLQKVIVVDFDANSYKLQPENMLPLEPWSGNDDDT 316 (393)
T ss_pred CCccchhhhHhhcCCcc-eEEEEEecCcccccCccchhhhhhhccccceeEEEEccccccccCcccccccCcCCCCcccc
Confidence 99999999999999997 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcc--CCCCcHHHHHhhhC
Q 022087 274 SLISLLPFLDILA--DAEDVRPIIAKTFG 300 (303)
Q Consensus 274 eLl~Ll~~Le~L~--~~~DVR~~l~~~f~ 300 (303)
.|++|++||+.|+ +++|||++|+ .|.
T Consensus 317 ~L~dL~~FL~~ia~~~~eDvR~vL~-~y~ 344 (393)
T KOG2832|consen 317 SLFDLLAFLEYIAQQQVEDVRPVLQ-SYS 344 (393)
T ss_pred hhhhHHHHHHHHHHccHHHHHHHHH-Hhc
Confidence 9999999999998 5899999995 443
No 6
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=100.00 E-value=3.5e-33 Score=240.09 Aligned_cols=138 Identities=31% Similarity=0.449 Sum_probs=118.0
Q ss_pred CCCceEEEEecCcccccccccccCCCCce------------eEEEecceeeeEEEeeCchHHHHHHHhhcceEEEEEcCC
Q 022087 127 GRKSVTLVLDLDETLVHSTLEYCDDADFT------------FTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTAS 194 (303)
Q Consensus 127 ~~~k~tLVLDLDeTLvhs~~~~~~~~d~~------------~~v~~~~~~~~~~v~~RP~l~eFL~~l~~~yEivIfTas 194 (303)
.++|++||||||+|||||+..+....+.. -...+......+++++|||+.+||+++++.|+++|||++
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~~yel~I~T~~ 82 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASKLYEMHVYTMG 82 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHhhcEEEEEeCC
Confidence 56899999999999999987654332211 012333345678999999999999999999999999999
Q ss_pred cHHHHHHHHHHhCCCCCceeee-EeeccceecCCccccccc-ccCCCCCcEEEEECChhhhccCCCceeeecccc
Q 022087 195 QSIYAAQLLDILDPDGKLISRR-VYRESCIFSDGTYTKDLT-VLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWF 267 (303)
Q Consensus 195 ~~~YA~~il~~LDp~~~~f~~r-l~R~~c~~~~g~~~KDL~-~Lgrdl~~vIIIDDs~~~~~~~~~N~I~I~~f~ 267 (303)
.+.||++|++.|||.+.+|++| ++|++|. |.+.|||+ .+|++++++|||||++.+|..||+|+|+|++|.
T Consensus 83 ~~~yA~~vl~~ldp~~~~F~~ri~~rd~~~---~~~~KdL~~i~~~d~~~vvivDd~~~~~~~~~~N~i~i~~~~ 154 (156)
T TIGR02250 83 TRAYAQAIAKLIDPDGKYFGDRIISRDESG---SPHTKSLLRLFPADESMVVIIDDREDVWPWHKRNLIQIEPYN 154 (156)
T ss_pred cHHHHHHHHHHhCcCCCeeccEEEEeccCC---CCccccHHHHcCCCcccEEEEeCCHHHhhcCccCEEEeCCcc
Confidence 9999999999999998899776 5599995 78899995 569999999999999999999999999999995
No 7
>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=99.96 E-value=2e-30 Score=249.49 Aligned_cols=180 Identities=45% Similarity=0.732 Sum_probs=167.8
Q ss_pred CCCCCc-cCCCCceEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhcceEEEEEcCCcHH
Q 022087 119 TASPKE-TQGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSI 197 (303)
Q Consensus 119 ~l~p~~-~~~~~k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~~~yEivIfTas~~~ 197 (303)
.++|.. ....++++|++|||+||+||........||...+......+.+||.+|||+++|+..++++|++++||++.+.
T Consensus 200 ~l~~~~~~~~~~~k~L~l~lde~l~~S~~~~~~~~df~~~~e~~~~~~~~~v~kRp~l~~fl~~ls~~~~l~~ft~s~~~ 279 (390)
T COG5190 200 TLEPPVSKSTSPKKTLVLDLDETLVHSSFRYITLLDFLVKVEISLLQHLVYVSKRPELDYFLGKLSKIHELVYFTASVKR 279 (390)
T ss_pred cccchhhcCCCCccccccCCCccceeeccccccccchhhccccccceeEEEEcCChHHHHHHhhhhhhEEEEEEecchhh
Confidence 344443 4567889999999999999999988888888888888788999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCceeeeEeeccceecCCcccccccccCCCCCcEEEEECChhhhccCCCceeeeccccCCCCchHHHH
Q 022087 198 YAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSLIS 277 (303)
Q Consensus 198 YA~~il~~LDp~~~~f~~rl~R~~c~~~~g~~~KDL~~Lgrdl~~vIIIDDs~~~~~~~~~N~I~I~~f~~d~~D~eLl~ 277 (303)
||++|++.|++.+ .|++++||++|....|.|+|||+.+||++.+|||||++|.+|.+||+|+|++.+|.+++.|.+|++
T Consensus 280 y~~~v~d~l~~~k-~~~~~lfr~sc~~~~G~~ikDis~i~r~l~~viiId~~p~SY~~~p~~~i~i~~W~~d~~d~el~~ 358 (390)
T COG5190 280 YADPVLDILDSDK-VFSHRLFRESCVSYLGVYIKDISKIGRSLDKVIIIDNSPASYEFHPENAIPIEKWISDEHDDELLN 358 (390)
T ss_pred hcchHHHhccccc-eeehhhhcccceeccCchhhhHHhhccCCCceEEeeCChhhhhhCccceeccCcccccccchhhhh
Confidence 9999999999997 899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccC--CCCcHHHHHhhh
Q 022087 278 LLPFLDILAD--AEDVRPIIAKTF 299 (303)
Q Consensus 278 Ll~~Le~L~~--~~DVR~~l~~~f 299 (303)
|+++|+.|.. ..||+..+..+-
T Consensus 359 ll~~le~L~~~~~~d~~~~l~~~~ 382 (390)
T COG5190 359 LLPFLEDLPDRDLKDVSSILQSRL 382 (390)
T ss_pred hcccccccccccchhhhhhhhhhh
Confidence 9999999997 899999987663
No 8
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.95 E-value=5.7e-28 Score=205.30 Aligned_cols=145 Identities=49% Similarity=0.859 Sum_probs=129.3
Q ss_pred CceEEEEecCcccccccccc---cCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHH
Q 022087 129 KSVTLVLDLDETLVHSTLEY---CDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDI 205 (303)
Q Consensus 129 ~k~tLVLDLDeTLvhs~~~~---~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~~~yEivIfTas~~~YA~~il~~ 205 (303)
+|++|||||||||+|++... ....++...+.+......+++++|||+.+||++|.+.|+++|||++.+.||+.+++.
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~~ 80 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLDL 80 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHHH
Confidence 57899999999999996422 223445666667777888999999999999999999999999999999999999999
Q ss_pred hCCCCCceeeeEeeccceecCCcccccccccCCCCCcEEEEECChhhhccCCCceeeeccccCCCCch
Q 022087 206 LDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDC 273 (303)
Q Consensus 206 LDp~~~~f~~rl~R~~c~~~~g~~~KDL~~Lgrdl~~vIIIDDs~~~~~~~~~N~I~I~~f~~d~~D~ 273 (303)
+++.+.+|...+++++|...+..|.|+|+++|++++++|+|||++..|..+++|||.|++|.++.+|+
T Consensus 81 l~~~~~~f~~i~~~~d~~~~KP~~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~f~~~~~d~ 148 (148)
T smart00577 81 LDPKKYFGYRRLFRDECVFVKGKYVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKPWFGDPDDT 148 (148)
T ss_pred hCcCCCEeeeEEECccccccCCeEeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecCcCCCCCCC
Confidence 99976567999999999988878999999999999999999999999999999999999999999874
No 9
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=99.86 E-value=7.9e-22 Score=199.38 Aligned_cols=135 Identities=32% Similarity=0.451 Sum_probs=108.0
Q ss_pred CceEEEEecCcccccccccccCC---------CC------ceeEEEecceeeeEEEeeCchHHHHHHHhhcceEEEEEcC
Q 022087 129 KSVTLVLDLDETLVHSTLEYCDD---------AD------FTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTA 193 (303)
Q Consensus 129 ~k~tLVLDLDeTLvhs~~~~~~~---------~d------~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~~~yEivIfTa 193 (303)
+++.||+|||.||+|+.....-. .. -.+.+...+....+||++||++.+||++++++||++|||.
T Consensus 145 ~~L~lv~Dld~tllh~~~~~~l~e~~~~l~~~~~~~~sn~dl~~~~~~~~~~~~~vKlRP~~~efL~~~sklfemhVyTm 224 (635)
T KOG0323|consen 145 KKLHLVLDLDHTLLHTILKSDLSETEKYLKEEAESVESNKDLFRFNPLGHDTEYLVKLRPFVHEFLKEANKLFEMHVYTM 224 (635)
T ss_pred hcceeehhhhhHHHHhhccchhhhhhhhcccccccccccccceeecccCCCceEEEEeCccHHHHHHHHHhhceeEEEec
Confidence 34799999999999997532110 00 0111111133456899999999999999999999999999
Q ss_pred CcHHHHHHHHHHhCCCCCceeeeEe-eccceecCCccccccccc-CCCCCcEEEEECChhhhccCCCceeeeccc
Q 022087 194 SQSIYAAQLLDILDPDGKLISRRVY-RESCIFSDGTYTKDLTVL-GVDLAKVAIIDNSPQVFRLQVNNGIPIESW 266 (303)
Q Consensus 194 s~~~YA~~il~~LDp~~~~f~~rl~-R~~c~~~~g~~~KDL~~L-grdl~~vIIIDDs~~~~~~~~~N~I~I~~f 266 (303)
|.+.||..|++.|||.|+||++|++ |+. ....-.+||..+ .++.+++|||||+..+|..++.|.|.|.+|
T Consensus 225 g~R~YA~~i~~liDP~~~lF~dRIisrde---~~~~kt~dL~~~~p~g~smvvIIDDr~dVW~~~~~nLI~i~~y 296 (635)
T KOG0323|consen 225 GTRDYALEIAKLIDPEGKYFGDRIISRDE---SPFFKTLDLVLLFPCGDSMVVIIDDRSDVWPDHKRNLIQIAPY 296 (635)
T ss_pred cchHHHHHHHHHhCCCCccccceEEEecC---CCcccccccccCCCCCCccEEEEeCccccccCCCcceEEeeee
Confidence 9999999999999999999999988 665 333456777766 478888999999999999999999999997
No 10
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=98.71 E-value=4.6e-08 Score=85.80 Aligned_cols=136 Identities=13% Similarity=0.078 Sum_probs=92.0
Q ss_pred eEEEEecCcccccccccccCC-----CCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCC-cHHHHHHHH
Q 022087 131 VTLVLDLDETLVHSTLEYCDD-----ADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTAS-QSIYAAQLL 203 (303)
Q Consensus 131 ~tLVLDLDeTLvhs~~~~~~~-----~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas-~~~YA~~il 203 (303)
..+|||||+||........-+ .+..-.+. ...+...+.++||+.++|++|. +.+.+.|.|++ ...++..++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L 80 (174)
T TIGR01685 3 RVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSII--IDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEIL 80 (174)
T ss_pred cEEEEeCCCCCcCcccccccCCCceeccCCCCeE--EeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHH
Confidence 478999999998654321111 11100000 0112345788999999999998 67999999988 999999999
Q ss_pred HHhCCC--C------CceeeeEeeccceecCC--cccccccc-c--CCCCCcEEEEECChhhhccCCCceeeeccccC
Q 022087 204 DILDPD--G------KLISRRVYRESCIFSDG--TYTKDLTV-L--GVDLAKVAIIDNSPQVFRLQVNNGIPIESWFD 268 (303)
Q Consensus 204 ~~LDp~--~------~~f~~rl~R~~c~~~~g--~~~KDL~~-L--grdl~~vIIIDDs~~~~~~~~~N~I~I~~f~~ 268 (303)
+.++.. + .+|+..+..+.....+. ...+.+.. + |.+++++++|||++........+|+.+.-...
T Consensus 81 ~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~ 158 (174)
T TIGR01685 81 GTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPS 158 (174)
T ss_pred HhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCC
Confidence 999865 1 47887777554211110 11222222 2 58899999999999999888888988866533
No 11
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=98.63 E-value=2.7e-08 Score=82.49 Aligned_cols=111 Identities=15% Similarity=0.124 Sum_probs=76.3
Q ss_pred eEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCC-cHHHHHHHHHHhCC
Q 022087 131 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTAS-QSIYAAQLLDILDP 208 (303)
Q Consensus 131 ~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas-~~~YA~~il~~LDp 208 (303)
+.+|+||||||+..-... .+.+... + .. ...||+.++|++++ +.+.++|.|++ .+.++..+++...+
T Consensus 1 kli~~DlD~Tl~~~~~~~-~~~~~~~----~-~~-----~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~ 69 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIV-VGEDPII----D-LE-----VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFED 69 (128)
T ss_pred CEEEEeCCCCCCCCCccc-ccCCcch----h-hH-----HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccc
Confidence 368999999999762110 0000000 0 00 57899999999997 57999999999 99999999998762
Q ss_pred ------CCCceeeeEeeccceecCCcccccccccC--CCCCcEEEEECChhhh
Q 022087 209 ------DGKLISRRVYRESCIFSDGTYTKDLTVLG--VDLAKVAIIDNSPQVF 253 (303)
Q Consensus 209 ------~~~~f~~rl~R~~c~~~~g~~~KDL~~Lg--rdl~~vIIIDDs~~~~ 253 (303)
-..+|+.....+.. -....+.+-+.++| ..++++++|||++...
T Consensus 70 ~~~i~~l~~~f~~~~~~~~~-pkp~~~~~a~~~lg~~~~p~~~l~igDs~~n~ 121 (128)
T TIGR01681 70 FGIIFPLAEYFDPLTIGYWL-PKSPRLVEIALKLNGVLKPKSILFVDDRPDNN 121 (128)
T ss_pred cccchhhHhhhhhhhhcCCC-cHHHHHHHHHHHhcCCCCcceEEEECCCHhHH
Confidence 12355555444321 11224666777889 9999999999999753
No 12
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=98.52 E-value=3.7e-08 Score=91.32 Aligned_cols=98 Identities=11% Similarity=0.175 Sum_probs=82.4
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecCC---cccccccccCCCCCcEE
Q 022087 169 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 244 (303)
Q Consensus 169 v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~g---~~~KDL~~Lgrdl~~vI 244 (303)
+...||+.++|+++. +.+.++|.|++.+.++..+++.++-.. +|+..+..+.+...+. .|.+-+.++|.++++++
T Consensus 108 ~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~-~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l 186 (260)
T PLN03243 108 YRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEG-FFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCI 186 (260)
T ss_pred cccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHh-hCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeE
Confidence 567899999999998 569999999999999999999998665 8999998877654443 56778889999999999
Q ss_pred EEECChhhhccCCCceeeecccc
Q 022087 245 IIDNSPQVFRLQVNNGIPIESWF 267 (303)
Q Consensus 245 IIDDs~~~~~~~~~N~I~I~~f~ 267 (303)
+|+|+..-......+|+.+....
T Consensus 187 ~IgDs~~Di~aA~~aG~~~i~v~ 209 (260)
T PLN03243 187 VFGNSNSSVEAAHDGCMKCVAVA 209 (260)
T ss_pred EEcCCHHHHHHHHHcCCEEEEEe
Confidence 99999988877777777665443
No 13
>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=98.48 E-value=8.5e-08 Score=93.26 Aligned_cols=136 Identities=30% Similarity=0.463 Sum_probs=102.6
Q ss_pred CCCceEEEEecCcccccccccccCC----CC------ceeEEEecceeeeEEEeeCchHHHHHHHhhcceEEEEEcCCcH
Q 022087 127 GRKSVTLVLDLDETLVHSTLEYCDD----AD------FTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQS 196 (303)
Q Consensus 127 ~~~k~tLVLDLDeTLvhs~~~~~~~----~d------~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~~~yEivIfTas~~ 196 (303)
.+++..||.|+|.|.+|+...+... .. ......+-.....++++.||++..|+...++.||+.++|.+.+
T Consensus 23 q~~~~~l~~~~~~~~~h~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~~~~~i~~~~e~~~~~~~~~ 102 (390)
T COG5190 23 QDKKLILVVDLDQTIIHTTVDPNDPNNVNQSLERTLKSVNDRDPVQEKCAYYVKARPKLFPFLTKISPLYELHIYTMGTR 102 (390)
T ss_pred cCcccccccccccceecccccCCCCCchhhhhhccccchhccccccccccceeeecccccchhhhhchhcceeeEeeccc
Confidence 4567789999999999998665110 00 0001111123456889999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCceeeeEeeccceecCCccccccccc-CCCCCcEEEEECChhhh---ccCCCceeeecc
Q 022087 197 IYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVL-GVDLAKVAIIDNSPQVF---RLQVNNGIPIES 265 (303)
Q Consensus 197 ~YA~~il~~LDp~~~~f~~rl~R~~c~~~~g~~~KDL~~L-grdl~~vIIIDDs~~~~---~~~~~N~I~I~~ 265 (303)
.||+.+.+++||.|++|..+....+ ...+.-.|-++++ ..+.+.++++||++..| -.. .|.++..+
T Consensus 103 ~~~~~~~~i~d~~g~~~~d~~~~~~--~~~~~~~~s~~~l~p~~~n~~vi~~d~~~~~~~~d~~-~~~v~~~~ 172 (390)
T COG5190 103 AYAERIAKIIDPTGKLFNDRILSRD--ESGSLSQKSLSRLFPKDQNMVVIIDDRGDVWGVGDMN-SNFVAKSP 172 (390)
T ss_pred cchhhhhhccccccccccccccccc--ccccchhhhhhhcCccccccccccccccccCCccchh-hhhhcccc
Confidence 9999999999999999988776332 2344556777776 67889999999999999 333 46666666
No 14
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=98.48 E-value=1.7e-07 Score=83.28 Aligned_cols=95 Identities=13% Similarity=0.130 Sum_probs=79.6
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecC---CcccccccccCCCCCcEE
Q 022087 169 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 244 (303)
Q Consensus 169 v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~---g~~~KDL~~Lgrdl~~vI 244 (303)
+...||+.++|+++. +.+.++|.|++.+.++..+++.++-.. +|+..+..+.+...+ ..|.+-++.+|.++++++
T Consensus 81 ~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~-~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~ 159 (214)
T PRK13288 81 VTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDE-FFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEAL 159 (214)
T ss_pred cccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh-ceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEE
Confidence 567899999999998 579999999999999999999998775 898888877664333 256677778899999999
Q ss_pred EEECChhhhccCCCceeeec
Q 022087 245 IIDNSPQVFRLQVNNGIPIE 264 (303)
Q Consensus 245 IIDDs~~~~~~~~~N~I~I~ 264 (303)
+|+|++.-+.....+|++.-
T Consensus 160 ~iGDs~~Di~aa~~aG~~~i 179 (214)
T PRK13288 160 MVGDNHHDILAGKNAGTKTA 179 (214)
T ss_pred EECCCHHHHHHHHHCCCeEE
Confidence 99999988877777788754
No 15
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=98.48 E-value=4.2e-08 Score=85.19 Aligned_cols=92 Identities=23% Similarity=0.285 Sum_probs=73.8
Q ss_pred EeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeecccee-------cCCcccccccccCCCCC
Q 022087 169 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIF-------SDGTYTKDLTVLGVDLA 241 (303)
Q Consensus 169 v~~RP~l~eFL~~l~~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~-------~~g~~~KDL~~Lgrdl~ 241 (303)
+...||+.++|++|. +.++|.|++.+.++..+++.++-.. +|+..+..+.... ....|.+-++++|.+++
T Consensus 83 ~~~~~g~~~~L~~L~--~~~~i~Tn~~~~~~~~~l~~~gl~~-~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~ 159 (184)
T TIGR01993 83 LKPDPELRNLLLRLP--GRKIIFTNGDRAHARRALNRLGIED-CFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPE 159 (184)
T ss_pred CCCCHHHHHHHHhCC--CCEEEEeCCCHHHHHHHHHHcCcHh-hhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCcc
Confidence 456799999999998 6899999999999999999998654 8888887665432 12256677788899999
Q ss_pred cEEEEECChhhhccCCCceeee
Q 022087 242 KVAIIDNSPQVFRLQVNNGIPI 263 (303)
Q Consensus 242 ~vIIIDDs~~~~~~~~~N~I~I 263 (303)
++++|+|++........+|+..
T Consensus 160 ~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 160 RAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred ceEEEeCCHHHHHHHHHcCCEE
Confidence 9999999998776666666653
No 16
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=98.43 E-value=6.9e-08 Score=85.27 Aligned_cols=95 Identities=15% Similarity=0.135 Sum_probs=78.5
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecC---CcccccccccCCCCCcEE
Q 022087 169 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 244 (303)
Q Consensus 169 v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~---g~~~KDL~~Lgrdl~~vI 244 (303)
+...||+.++|+++. +.+.++|.|.+...++..+++.++-.+ +|+..+..+++...+ ..|.+-++.+|.++++++
T Consensus 74 ~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l 152 (205)
T TIGR01454 74 VEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLP-LFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAV 152 (205)
T ss_pred cccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChh-heeeEEecCcCCCCCCChHHHHHHHHHcCCChhheE
Confidence 677899999999997 579999999999999999999998875 788887776654322 245566778899999999
Q ss_pred EEECChhhhccCCCceeeec
Q 022087 245 IIDNSPQVFRLQVNNGIPIE 264 (303)
Q Consensus 245 IIDDs~~~~~~~~~N~I~I~ 264 (303)
+|+|++.-+.....+|++..
T Consensus 153 ~igD~~~Di~aA~~~Gi~~i 172 (205)
T TIGR01454 153 MVGDAVTDLASARAAGTATV 172 (205)
T ss_pred EEcCCHHHHHHHHHcCCeEE
Confidence 99999987877777888754
No 17
>PRK11587 putative phosphatase; Provisional
Probab=98.37 E-value=2.5e-07 Score=82.71 Aligned_cols=96 Identities=13% Similarity=0.089 Sum_probs=75.1
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecCC---cccccccccCCCCCcEE
Q 022087 169 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 244 (303)
Q Consensus 169 v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~g---~~~KDL~~Lgrdl~~vI 244 (303)
+...||+.++|++|. +.+.++|-|++...++..+++...-. +|...+..++....+. .|.+-+..+|..+++++
T Consensus 82 ~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~--~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~~l 159 (218)
T PRK11587 82 ITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLP--APEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECV 159 (218)
T ss_pred ceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCC--CccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcccEE
Confidence 577999999999997 67999999999998888888877652 3556666655543332 56777888999999999
Q ss_pred EEECChhhhccCCCceeeeccc
Q 022087 245 IIDNSPQVFRLQVNNGIPIESW 266 (303)
Q Consensus 245 IIDDs~~~~~~~~~N~I~I~~f 266 (303)
+|+|++.-.......|+..--+
T Consensus 160 ~igDs~~di~aA~~aG~~~i~v 181 (218)
T PRK11587 160 VVEDAPAGVLSGLAAGCHVIAV 181 (218)
T ss_pred EEecchhhhHHHHHCCCEEEEE
Confidence 9999998887777777765444
No 18
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=98.37 E-value=1.5e-07 Score=87.88 Aligned_cols=95 Identities=11% Similarity=0.078 Sum_probs=72.4
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecCCcccccccccCCCCCcEEEEE
Q 022087 169 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIID 247 (303)
Q Consensus 169 v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~g~~~KDL~~Lgrdl~~vIIID 247 (303)
+...||+.++|++|. +.+.++|.|++.+.++..+++.++... +|+..+..+........+.+-+..+|.+++++++|+
T Consensus 141 ~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~-~F~~vi~~~~~~~k~~~~~~~l~~~~~~p~~~l~IG 219 (273)
T PRK13225 141 LQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRS-LFSVVQAGTPILSKRRALSQLVAREGWQPAAVMYVG 219 (273)
T ss_pred CCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh-heEEEEecCCCCCCHHHHHHHHHHhCcChhHEEEEC
Confidence 466899999999998 679999999999999999999998764 787665543321111234444566788899999999
Q ss_pred CChhhhccCCCceeeec
Q 022087 248 NSPQVFRLQVNNGIPIE 264 (303)
Q Consensus 248 Ds~~~~~~~~~N~I~I~ 264 (303)
|++.-......+|+..-
T Consensus 220 Ds~~Di~aA~~AG~~~I 236 (273)
T PRK13225 220 DETRDVEAARQVGLIAV 236 (273)
T ss_pred CCHHHHHHHHHCCCeEE
Confidence 99987766666677654
No 19
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.36 E-value=2.8e-07 Score=73.56 Aligned_cols=109 Identities=20% Similarity=0.272 Sum_probs=75.6
Q ss_pred EEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCCC
Q 022087 132 TLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDG 210 (303)
Q Consensus 132 tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~~-~yEivIfTas~~~YA~~il~~LDp~~ 210 (303)
++|||+||||......... ...+..+|++.++|+++.+ .+.++|.|++.+.++..+++.+....
T Consensus 1 ~~vfD~D~tl~~~~~~~~~---------------~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~ 65 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAE---------------IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDD 65 (139)
T ss_pred CeEEccCCceEccCccccc---------------cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCch
Confidence 4799999999877432111 1236789999999999996 49999999999999999999987543
Q ss_pred CceeeeEeeccceec----------------CC---cccccccccCCCCCcEEEEECChhhhccC
Q 022087 211 KLISRRVYRESCIFS----------------DG---TYTKDLTVLGVDLAKVAIIDNSPQVFRLQ 256 (303)
Q Consensus 211 ~~f~~rl~R~~c~~~----------------~g---~~~KDL~~Lgrdl~~vIIIDDs~~~~~~~ 256 (303)
++...+..+..... +. .+..-++.++.+.+.++.|+|++.-....
T Consensus 66 -~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~ 129 (139)
T cd01427 66 -YFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMA 129 (139)
T ss_pred -hhhheeccchhhhhcccccccccccccccCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHH
Confidence 34444443322211 11 12233345567789999999999765443
No 20
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=98.35 E-value=1.2e-07 Score=85.83 Aligned_cols=93 Identities=15% Similarity=0.165 Sum_probs=77.4
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecCC---cccccccccCCCCCcEE
Q 022087 169 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 244 (303)
Q Consensus 169 v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~g---~~~KDL~~Lgrdl~~vI 244 (303)
+...||+.++|+.+. +.+.++|-|++.+.++...++.++-.. +|+..+..+.....+. .|.+-++++|.++++++
T Consensus 92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~-~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l 170 (224)
T PRK14988 92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDA-HLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERTL 170 (224)
T ss_pred CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHH-HCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHEE
Confidence 567899999999998 479999999999999999999887654 7888887665543332 46677788999999999
Q ss_pred EEECChhhhccCCCceee
Q 022087 245 IIDNSPQVFRLQVNNGIP 262 (303)
Q Consensus 245 IIDDs~~~~~~~~~N~I~ 262 (303)
+|+|++........+|+.
T Consensus 171 ~igDs~~di~aA~~aG~~ 188 (224)
T PRK14988 171 FIDDSEPILDAAAQFGIR 188 (224)
T ss_pred EEcCCHHHHHHHHHcCCe
Confidence 999999888777778885
No 21
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=98.34 E-value=7.4e-08 Score=83.46 Aligned_cols=94 Identities=15% Similarity=0.148 Sum_probs=76.5
Q ss_pred EeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecCC---cccccccccCCCCCcEEE
Q 022087 169 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVAI 245 (303)
Q Consensus 169 v~~RP~l~eFL~~l~~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~g---~~~KDL~~Lgrdl~~vII 245 (303)
+..-|+ .+.|+++.+.+.++|-|++.+.+++.+++.++-.+ +|+..+..+++...+. .|..-++++|.+++++|+
T Consensus 87 ~~~~~~-~e~L~~L~~~~~l~I~T~~~~~~~~~~l~~~~l~~-~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~ 164 (188)
T PRK10725 87 VEPLPL-IEVVKAWHGRRPMAVGTGSESAIAEALLAHLGLRR-YFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVV 164 (188)
T ss_pred CCCccH-HHHHHHHHhCCCEEEEcCCchHHHHHHHHhCCcHh-HceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEE
Confidence 345676 48999998778999999999999999999998765 8998888877654443 466777888999999999
Q ss_pred EECChhhhccCCCceeeec
Q 022087 246 IDNSPQVFRLQVNNGIPIE 264 (303)
Q Consensus 246 IDDs~~~~~~~~~N~I~I~ 264 (303)
|+|++.-+.....+|++.-
T Consensus 165 igDs~~di~aA~~aG~~~i 183 (188)
T PRK10725 165 FEDADFGIQAARAAGMDAV 183 (188)
T ss_pred EeccHhhHHHHHHCCCEEE
Confidence 9999988877777777653
No 22
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=98.34 E-value=4.9e-07 Score=74.40 Aligned_cols=114 Identities=20% Similarity=0.207 Sum_probs=78.3
Q ss_pred eEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCc--------HHHHHH
Q 022087 131 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQ--------SIYAAQ 201 (303)
Q Consensus 131 ~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~--------~~YA~~ 201 (303)
+.++||+||||++.... . .........|++.++|++|. +.+.++|.|.+. ..++..
T Consensus 1 k~~~~D~dgtL~~~~~~--~-------------~~~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~ 65 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPY--V-------------DDEDERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVAR 65 (132)
T ss_pred CEEEEeCCCceecCCCC--C-------------CCHHHheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHH
Confidence 37899999999964110 0 00112567899999999997 569999999999 888999
Q ss_pred HHHHhCCCCCceeeeEeeccceec-CCccccccccc-CCCCCcEEEEEC-ChhhhccCCCceee
Q 022087 202 LLDILDPDGKLISRRVYRESCIFS-DGTYTKDLTVL-GVDLAKVAIIDN-SPQVFRLQVNNGIP 262 (303)
Q Consensus 202 il~~LDp~~~~f~~rl~R~~c~~~-~g~~~KDL~~L-grdl~~vIIIDD-s~~~~~~~~~N~I~ 262 (303)
+++.++.. +...++...+..- ...|.+-++.+ +.+++++++|+| +..-......+|+.
T Consensus 66 ~l~~~~l~---~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 66 RLEELGVP---IDVLYACPHCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred HHHHCCCC---EEEEEECCCCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 99988764 2222232211111 23456667788 599999999999 57666555555554
No 23
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=98.32 E-value=1.7e-07 Score=91.49 Aligned_cols=97 Identities=10% Similarity=0.094 Sum_probs=81.7
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecCC---cccccccccCCCCCcEE
Q 022087 169 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 244 (303)
Q Consensus 169 v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~g---~~~KDL~~Lgrdl~~vI 244 (303)
+...||+.+||+.|. +.+.++|-|++.+.+++.+++.++-.. ||+..+..+++...+. .|.+-+..+|.+++++|
T Consensus 215 ~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~-yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl 293 (381)
T PLN02575 215 YRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRG-FFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCI 293 (381)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHH-HceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEE
Confidence 457899999999998 579999999999999999999998765 8999988887754443 56778889999999999
Q ss_pred EEECChhhhccCCCceeeeccc
Q 022087 245 IIDNSPQVFRLQVNNGIPIESW 266 (303)
Q Consensus 245 IIDDs~~~~~~~~~N~I~I~~f 266 (303)
+|+|++.-......+|+..-..
T Consensus 294 ~IGDS~~DIeAAk~AGm~~IgV 315 (381)
T PLN02575 294 VFGNSNQTVEAAHDARMKCVAV 315 (381)
T ss_pred EEcCCHHHHHHHHHcCCEEEEE
Confidence 9999998887766677765554
No 24
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=98.28 E-value=7.6e-07 Score=80.44 Aligned_cols=95 Identities=12% Similarity=0.046 Sum_probs=76.1
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecCC---cccccccccCCCCCcEE
Q 022087 169 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 244 (303)
Q Consensus 169 v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~g---~~~KDL~~Lgrdl~~vI 244 (303)
+...||+.++|+++. +.+.++|-|++...++..+++.++-.. +|...+..+++...+. .|.+-++++|.++++++
T Consensus 94 ~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~l 172 (229)
T PRK13226 94 SQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQ-RCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDCV 172 (229)
T ss_pred CeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchh-cccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhEE
Confidence 678999999999998 568999999999999999999987664 6776666665543332 36677788999999999
Q ss_pred EEECChhhhccCCCceeeec
Q 022087 245 IIDNSPQVFRLQVNNGIPIE 264 (303)
Q Consensus 245 IIDDs~~~~~~~~~N~I~I~ 264 (303)
+|+|++.-.......|+..-
T Consensus 173 ~IGDs~~Di~aA~~aG~~~i 192 (229)
T PRK13226 173 YVGDDERDILAARAAGMPSV 192 (229)
T ss_pred EeCCCHHHHHHHHHCCCcEE
Confidence 99999987766666676653
No 25
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=98.25 E-value=1.7e-07 Score=84.68 Aligned_cols=99 Identities=17% Similarity=0.207 Sum_probs=86.3
Q ss_pred EeeCchHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecCC---cccccccccCCCCCcEE
Q 022087 169 VKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 244 (303)
Q Consensus 169 v~~RP~l~eFL~~l~~~-yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~g---~~~KDL~~Lgrdl~~vI 244 (303)
+...||+.+||++|.+. .-+++-|++.+..+..+++.+...+ +|...+++++....+. .|.+-..+||.+++++|
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~-~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~Cv 163 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLD-YFDVIVTADDVARGKPAPDIYLLAAERLGVDPEECV 163 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChh-hcchhccHHHHhcCCCCCHHHHHHHHHcCCChHHeE
Confidence 68999999999999965 9999999999999999999999886 8999999888765543 58899999999999999
Q ss_pred EEECChhhhccCCCceeeeccccC
Q 022087 245 IIDNSPQVFRLQVNNGIPIESWFD 268 (303)
Q Consensus 245 IIDDs~~~~~~~~~N~I~I~~f~~ 268 (303)
+|+|++.-......-|+.+-.+.+
T Consensus 164 viEDs~~Gi~Aa~aAGm~vv~v~~ 187 (221)
T COG0637 164 VVEDSPAGIQAAKAAGMRVVGVPA 187 (221)
T ss_pred EEecchhHHHHHHHCCCEEEEecC
Confidence 999999888777667777776665
No 26
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.25 E-value=3e-06 Score=79.84 Aligned_cols=73 Identities=16% Similarity=0.188 Sum_probs=60.8
Q ss_pred CCceEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeC-chHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHH
Q 022087 128 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQR-PHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDI 205 (303)
Q Consensus 128 ~~k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~R-P~l~eFL~~l~~-~yEivIfTas~~~YA~~il~~ 205 (303)
..+..+||||||||+.... -|..| ||+.+.|++|.+ .+.++|+|++.+.++..+++.
T Consensus 124 ~~~kvIvFDLDgTLi~~~~---------------------~v~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~ 182 (301)
T TIGR01684 124 EPPHVVVFDLDSTLITDEE---------------------PVRIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRK 182 (301)
T ss_pred ccceEEEEecCCCCcCCCC---------------------ccccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHH
Confidence 4556999999999987632 26789 999999999995 589999999999999999999
Q ss_pred hCCCCCceeeeEeeccc
Q 022087 206 LDPDGKLISRRVYRESC 222 (303)
Q Consensus 206 LDp~~~~f~~rl~R~~c 222 (303)
++..+ +|+..+..++.
T Consensus 183 lGLd~-YFdvIIs~Gdv 198 (301)
T TIGR01684 183 VKLDR-YFDIIISGGHK 198 (301)
T ss_pred cCCCc-ccCEEEECCcc
Confidence 99885 77666664443
No 27
>COG4996 Predicted phosphatase [General function prediction only]
Probab=98.21 E-value=7.6e-06 Score=68.41 Aligned_cols=144 Identities=17% Similarity=0.094 Sum_probs=98.5
Q ss_pred EEEEecCcccccccccccCCCCceeE--EEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCC
Q 022087 132 TLVLDLDETLVHSTLEYCDDADFTFT--VFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDP 208 (303)
Q Consensus 132 tLVLDLDeTLvhs~~~~~~~~d~~~~--v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp 208 (303)
.+|||+|+||.....-..-.+.|..- ..+. ...+.-|.++|++.+||+.+. ..|-+..+|.....-|-+++..||.
T Consensus 2 ~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~-Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~ 80 (164)
T COG4996 2 AIVFDADKTLWDHHNISSLEPPFRRVSSNTIE-DSKGREVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDL 80 (164)
T ss_pred cEEEeCCCcccccccchhcCCcceecCcccee-cCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhch
Confidence 57999999997653211111111110 0000 123456999999999999999 6799999999999999999999999
Q ss_pred CCCceeeeEeeccceecCCccccccccc------CCCCCcEEEEECChhhh---ccCCCceeeeccccCCCCchHHHHH
Q 022087 209 DGKLISRRVYRESCIFSDGTYTKDLTVL------GVDLAKVAIIDNSPQVF---RLQVNNGIPIESWFDDPSDCSLISL 278 (303)
Q Consensus 209 ~~~~f~~rl~R~~c~~~~g~~~KDL~~L------grdl~~vIIIDDs~~~~---~~~~~N~I~I~~f~~d~~D~eLl~L 278 (303)
.. ||.+.....+-. ......+-|..+ ...++++|.+||+...+ .....|.=.++.|.+-+.-.|...|
T Consensus 81 ~~-yFhy~ViePhP~-K~~ML~~llr~i~~er~~~ikP~~Ivy~DDR~iH~~~Iwe~~G~V~~~~~~~Di~c~~ei~sl 157 (164)
T COG4996 81 LQ-YFHYIVIEPHPY-KFLMLSQLLREINTERNQKIKPSEIVYLDDRRIHFGNIWEYLGNVKCLEMWKDISCYSEIFSL 157 (164)
T ss_pred hh-hEEEEEecCCCh-hHHHHHHHHHHHHHhhccccCcceEEEEecccccHHHHHHhcCCeeeeEeecchHHHHHHHHH
Confidence 86 898887766542 111222333332 35788999999999876 3467888888999876544444433
No 28
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.20 E-value=2.9e-06 Score=75.46 Aligned_cols=97 Identities=14% Similarity=0.227 Sum_probs=71.1
Q ss_pred EeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccce----------ec--CC-ccccccc
Q 022087 169 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCI----------FS--DG-TYTKDLT 234 (303)
Q Consensus 169 v~~RP~l~eFL~~l~~-~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~----------~~--~g-~~~KDL~ 234 (303)
+..+||+.+||+++.+ .+.++|.|++...++..+++.++-.. +|+..+.-++.. .. +. .+.+-++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 162 (219)
T TIGR00338 84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDA-AFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLR 162 (219)
T ss_pred CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc-eEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHH
Confidence 5689999999999995 79999999999999999999987664 666544322111 00 11 2334455
Q ss_pred ccCCCCCcEEEEECChhhhccCCCceeeecccc
Q 022087 235 VLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWF 267 (303)
Q Consensus 235 ~Lgrdl~~vIIIDDs~~~~~~~~~N~I~I~~f~ 267 (303)
.+|.+++++++|+|++.-.......|+.+ .|.
T Consensus 163 ~~~~~~~~~i~iGDs~~Di~aa~~ag~~i-~~~ 194 (219)
T TIGR00338 163 KEGISPENTVAVGDGANDLSMIKAAGLGI-AFN 194 (219)
T ss_pred HcCCCHHHEEEEECCHHHHHHHHhCCCeE-EeC
Confidence 67889999999999998776655667766 343
No 29
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=98.20 E-value=6.5e-06 Score=77.67 Aligned_cols=123 Identities=16% Similarity=0.189 Sum_probs=84.9
Q ss_pred CCCceEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeC-chHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHH
Q 022087 127 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQR-PHLKTFLERVAE-MFEVVIFTASQSIYAAQLLD 204 (303)
Q Consensus 127 ~~~k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~R-P~l~eFL~~l~~-~yEivIfTas~~~YA~~il~ 204 (303)
.+.++.+|+||||||+.... -|.+| |++.+.|+++.+ .+.++|+|++.++++..+++
T Consensus 125 ~~~~~~i~~D~D~TL~~~~~---------------------~v~irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le 183 (303)
T PHA03398 125 WEIPHVIVFDLDSTLITDEE---------------------PVRIRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLK 183 (303)
T ss_pred eeeccEEEEecCCCccCCCC---------------------ccccCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHH
Confidence 45667999999999998732 26789 999999999995 79999999999999999999
Q ss_pred HhCCCCCceeeeEeeccceecC----------------Cccccccc-----------------ccCCCC-CcEEEEECCh
Q 022087 205 ILDPDGKLISRRVYRESCIFSD----------------GTYTKDLT-----------------VLGVDL-AKVAIIDNSP 250 (303)
Q Consensus 205 ~LDp~~~~f~~rl~R~~c~~~~----------------g~~~KDL~-----------------~Lgrdl-~~vIIIDDs~ 250 (303)
.++..+ +|+..+..++..... ..+..|.. +.|.+- +-+-+|||-+
T Consensus 184 ~lgL~~-yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~~~~~~lPKSprvVl~yL~~~gvn~~KtiTLVDDl~ 262 (303)
T PHA03398 184 ETKLEG-YFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDVTDVKNLPKSPRVVLWYLRKKGVNYFKTITLVDDLK 262 (303)
T ss_pred HcCCCc-cccEEEECCCcccccccceeecccceeEEecCceeEeCCcccCCCCCCeehHHHHHHcCcceeccEEEeccCc
Confidence 999875 776666655443211 12233332 224433 3345777776
Q ss_pred hhhccCCCceeeeccccCCCCc
Q 022087 251 QVFRLQVNNGIPIESWFDDPSD 272 (303)
Q Consensus 251 ~~~~~~~~N~I~I~~f~~d~~D 272 (303)
.. ..+-+|-+.++..-.-.+|
T Consensus 263 ~N-n~~YD~fv~v~rcp~P~~D 283 (303)
T PHA03398 263 SN-NYSYDYFVNVKRCPEPVND 283 (303)
T ss_pred cc-CccceeEEEeeeCCCCcHH
Confidence 53 3556777777765443333
No 30
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=98.19 E-value=3e-06 Score=73.56 Aligned_cols=115 Identities=16% Similarity=0.180 Sum_probs=77.1
Q ss_pred eEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCcH-------------
Q 022087 131 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQS------------- 196 (303)
Q Consensus 131 ~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~~------------- 196 (303)
+.+.||+||||+-.. .... ..-.+.+-||+.++|++|. +.|.++|.|++..
T Consensus 2 ~~~~~D~Dgtl~~~~-~~~~--------------~~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~ 66 (176)
T TIGR00213 2 KAIFLDRDGTINIDH-GYVH--------------EIDNFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQ 66 (176)
T ss_pred CEEEEeCCCCEeCCC-CCCC--------------CHHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHH
Confidence 578999999998421 1000 0112557799999999998 5699999999884
Q ss_pred --HHHHHHHHHhCCCCCceeeeEeec-----------cceecC---CcccccccccCCCCCcEEEEECChhhhccCCCce
Q 022087 197 --IYAAQLLDILDPDGKLISRRVYRE-----------SCIFSD---GTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNG 260 (303)
Q Consensus 197 --~YA~~il~~LDp~~~~f~~rl~R~-----------~c~~~~---g~~~KDL~~Lgrdl~~vIIIDDs~~~~~~~~~N~ 260 (303)
.+...++..+... |...++.. .|...+ +.|.+-++++|.+++++++|+|++.-......+|
T Consensus 67 ~~~~~~~~l~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG 143 (176)
T TIGR00213 67 LTEWMDWSLAERDVD---LDGIYYCPHHPEGVEEFRQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAK 143 (176)
T ss_pred HHHHHHHHHHHcCCC---ccEEEECCCCCcccccccCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCC
Confidence 3444445444322 44444322 232222 2466777888999999999999998887776777
Q ss_pred eee
Q 022087 261 IPI 263 (303)
Q Consensus 261 I~I 263 (303)
+..
T Consensus 144 ~~~ 146 (176)
T TIGR00213 144 VKT 146 (176)
T ss_pred CcE
Confidence 754
No 31
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=98.15 E-value=1.7e-06 Score=73.04 Aligned_cols=117 Identities=20% Similarity=0.261 Sum_probs=78.1
Q ss_pred eEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCcH-------------
Q 022087 131 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQS------------- 196 (303)
Q Consensus 131 ~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~~------------- 196 (303)
++|+||+||||+........ ...-.+...||+.++|++|. +.|.++|.|++.+
T Consensus 1 ~~~~~d~dgtl~~~~~~~~~-------------~~~~~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~ 67 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSDYP-------------RSLDDWQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRA 67 (147)
T ss_pred CeEEEeCCCceeccCCcccC-------------CCHHHeEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHH
Confidence 37899999999987532110 00111467899999999998 6799999999874
Q ss_pred --HHHHHHHHHhCCCCCceeeeEee-----ccceecC---CcccccccccCCCCCcEEEEECChhhhccCCCceeee
Q 022087 197 --IYAAQLLDILDPDGKLISRRVYR-----ESCIFSD---GTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPI 263 (303)
Q Consensus 197 --~YA~~il~~LDp~~~~f~~rl~R-----~~c~~~~---g~~~KDL~~Lgrdl~~vIIIDDs~~~~~~~~~N~I~I 263 (303)
.++..+++.++.. +...++. +.....+ ..|.+-+..+|.+++++++|.|++.-.......|+..
T Consensus 68 ~~~~~~~~l~~~~l~---~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~ 141 (147)
T TIGR01656 68 PNGRVLELLRQLGVA---VDGVLFCPHHPADNCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAA 141 (147)
T ss_pred HHHHHHHHHHhCCCc---eeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCE
Confidence 5667777777653 2122221 1111111 2345556778999999999999988776666666654
No 32
>PHA02597 30.2 hypothetical protein; Provisional
Probab=98.13 E-value=3.3e-07 Score=80.41 Aligned_cols=96 Identities=13% Similarity=0.113 Sum_probs=67.6
Q ss_pred EeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCCCC---CceeeeEeeccceecCCcccccccccCCCCCcEEE
Q 022087 169 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDG---KLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAI 245 (303)
Q Consensus 169 v~~RP~l~eFL~~l~~~yEivIfTas~~~YA~~il~~LDp~~---~~f~~rl~R~~c~~~~g~~~KDL~~Lgrdl~~vII 245 (303)
+...||+.++|++|.+.+.+++-|++.......+++.+...+ .+|+..+..+........+.+-++.+| ++.+|+
T Consensus 73 ~~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~~~kp~~~~~a~~~~~--~~~~v~ 150 (197)
T PHA02597 73 LSAYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHDESKEKLFIKAKEKYG--DRVVCF 150 (197)
T ss_pred ccCCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccCcccHHHHHHHHHHhC--CCcEEE
Confidence 668999999999999777777777766655555666654332 145666665554322234555667778 678999
Q ss_pred EECChhhhccCCCc--eeeeccc
Q 022087 246 IDNSPQVFRLQVNN--GIPIESW 266 (303)
Q Consensus 246 IDDs~~~~~~~~~N--~I~I~~f 266 (303)
|||++........+ ||..--+
T Consensus 151 vgDs~~di~aA~~a~~Gi~~i~~ 173 (197)
T PHA02597 151 VDDLAHNLDAAHEALSQLPVIHM 173 (197)
T ss_pred eCCCHHHHHHHHHHHcCCcEEEe
Confidence 99999998887778 8877655
No 33
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=98.13 E-value=5.4e-06 Score=71.63 Aligned_cols=122 Identities=16% Similarity=0.123 Sum_probs=86.5
Q ss_pred eEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCC---------------
Q 022087 131 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTAS--------------- 194 (303)
Q Consensus 131 ~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas--------------- 194 (303)
+.++||.||||++..... +. ....-.+..-||+.+.|++|. +.|.++|.|+.
T Consensus 2 ~~~~~d~dg~l~~~~~~~-----~~-------~~~~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~ 69 (161)
T TIGR01261 2 KILFIDRDGTLIEEPPSD-----FQ-------VDALEKLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDG 69 (161)
T ss_pred CEEEEeCCCCccccCCCc-----cc-------cCCHHHeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHH
Confidence 578999999999853210 00 001113677899999999998 57999999996
Q ss_pred cHHHHHHHHHHhCCCCCceeeeEee-----ccceecCC---cccccccccCCCCCcEEEEECChhhhccCCCceeeeccc
Q 022087 195 QSIYAAQLLDILDPDGKLISRRVYR-----ESCIFSDG---TYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESW 266 (303)
Q Consensus 195 ~~~YA~~il~~LDp~~~~f~~rl~R-----~~c~~~~g---~~~KDL~~Lgrdl~~vIIIDDs~~~~~~~~~N~I~I~~f 266 (303)
...++..+++.++.. |...++. +++...+. .+..-++.+|.+++++++|.|+..-......+|+..-.+
T Consensus 70 ~~~~~~~~l~~~gl~---fd~ii~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~ 146 (161)
T TIGR01261 70 PHNLMLQIFRSQGII---FDDVLICPHFPDDNCDCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQY 146 (161)
T ss_pred HHHHHHHHHHHCCCc---eeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEE
Confidence 356888888888774 6666553 45443332 344445667889999999999987777777788877655
Q ss_pred c
Q 022087 267 F 267 (303)
Q Consensus 267 ~ 267 (303)
.
T Consensus 147 ~ 147 (161)
T TIGR01261 147 D 147 (161)
T ss_pred C
Confidence 4
No 34
>PLN02940 riboflavin kinase
Probab=98.13 E-value=5.2e-07 Score=88.15 Aligned_cols=96 Identities=10% Similarity=0.085 Sum_probs=77.8
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHH-HhCCCCCceeeeEeeccceecCC---cccccccccCCCCCcE
Q 022087 169 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLD-ILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKV 243 (303)
Q Consensus 169 v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~-~LDp~~~~f~~rl~R~~c~~~~g---~~~KDL~~Lgrdl~~v 243 (303)
+...||+.++|++|. +.+.++|-|++.+.++..+++ ..+-. .+|+..+..+++...+. .|.+-++.+|.+++++
T Consensus 92 ~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~-~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~ 170 (382)
T PLN02940 92 IKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWK-ESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNC 170 (382)
T ss_pred CCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChH-hhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChhHE
Confidence 567899999999997 569999999999999998887 55554 48999999887754442 5677788899999999
Q ss_pred EEEECChhhhccCCCceeeecc
Q 022087 244 AIIDNSPQVFRLQVNNGIPIES 265 (303)
Q Consensus 244 IIIDDs~~~~~~~~~N~I~I~~ 265 (303)
++|+|++.-.......|+..-.
T Consensus 171 l~VGDs~~Di~aA~~aGi~~I~ 192 (382)
T PLN02940 171 LVIEDSLPGVMAGKAAGMEVIA 192 (382)
T ss_pred EEEeCCHHHHHHHHHcCCEEEE
Confidence 9999999887766666766443
No 35
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=98.13 E-value=7.2e-07 Score=79.38 Aligned_cols=95 Identities=16% Similarity=0.169 Sum_probs=75.3
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCC-CceeeeEeeccceecC---CcccccccccCCC-CCc
Q 022087 169 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDG-KLISRRVYRESCIFSD---GTYTKDLTVLGVD-LAK 242 (303)
Q Consensus 169 v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~~-~~f~~rl~R~~c~~~~---g~~~KDL~~Lgrd-l~~ 242 (303)
..+.||+.++|++++ +.+.++|-|++...++..+++.++-.. .+|+..+..++-...+ ..|.+-+.++|.. +++
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~ 165 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQS 165 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhH
Confidence 468999999999997 689999999999999999999998652 5788777765432222 2455667788876 799
Q ss_pred EEEEECChhhhccCCCceeee
Q 022087 243 VAIIDNSPQVFRLQVNNGIPI 263 (303)
Q Consensus 243 vIIIDDs~~~~~~~~~N~I~I 263 (303)
+++|+|++.-.......|+.+
T Consensus 166 ~~~igD~~~Di~aa~~aG~~~ 186 (220)
T TIGR03351 166 VAVAGDTPNDLEAGINAGAGA 186 (220)
T ss_pred eEEeCCCHHHHHHHHHCCCCe
Confidence 999999998777766677775
No 36
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=98.09 E-value=1.2e-05 Score=70.27 Aligned_cols=120 Identities=15% Similarity=0.197 Sum_probs=64.6
Q ss_pred ceEEEEecCcccccccccccCCCCceeE----EEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcC-CcHHHHHHHH
Q 022087 130 SVTLVLDLDETLVHSTLEYCDDADFTFT----VFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTA-SQSIYAAQLL 203 (303)
Q Consensus 130 k~tLVLDLDeTLvhs~~~~~~~~d~~~~----v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTa-s~~~YA~~il 203 (303)
++.+|||||.||...-......+.|... ... ...+.-|.+-|++.+.|+.+. +..+|++.|. ..++.|.++|
T Consensus 3 PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~--D~~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L 80 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVV--DSRGEEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELL 80 (169)
T ss_dssp -SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EE--ETT--EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHH
T ss_pred CcEEEEcCcCCCCchhHhhccCCCceecCCCCEEE--eCCCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHH
Confidence 4689999999997764332222211110 000 123456899999999999999 6899999995 5688999999
Q ss_pred HHhCCC---------CCceeeeEeeccceecCCcccccccccCCCCCcEEEEECChhhh
Q 022087 204 DILDPD---------GKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVF 253 (303)
Q Consensus 204 ~~LDp~---------~~~f~~rl~R~~c~~~~g~~~KDL~~Lgrdl~~vIIIDDs~~~~ 253 (303)
+.|+.. ..+|++.=.-..+ ...++.+-.+..|.+.+.++++||.....
T Consensus 81 ~~l~i~~~~~~~~~~~~~F~~~eI~~gs--K~~Hf~~i~~~tgI~y~eMlFFDDe~~N~ 137 (169)
T PF12689_consen 81 KLLEIDDADGDGVPLIEYFDYLEIYPGS--KTTHFRRIHRKTGIPYEEMLFFDDESRNI 137 (169)
T ss_dssp HHTT-C----------CCECEEEESSS---HHHHHHHHHHHH---GGGEEEEES-HHHH
T ss_pred HhcCCCccccccccchhhcchhheecCc--hHHHHHHHHHhcCCChhHEEEecCchhcc
Confidence 999876 0144432111111 11123333346699999999999998765
No 37
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=98.07 E-value=7.1e-06 Score=78.14 Aligned_cols=110 Identities=16% Similarity=0.122 Sum_probs=76.8
Q ss_pred CceEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHH--
Q 022087 129 KSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDI-- 205 (303)
Q Consensus 129 ~k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~-- 205 (303)
.+++||+|||+||......... ...-......|++.++|+++. +.+.++|.|...+..|..+++.
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~g------------~~~i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~ 69 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGEDG------------IDNLNLSPLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRK 69 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccCC------------ccccccCccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCc
Confidence 3579999999999865321100 000011234789999999998 6799999999999999999998
Q ss_pred --hCCCCCceeeeEeeccceecC-CcccccccccCCCCCcEEEEECChhhhc
Q 022087 206 --LDPDGKLISRRVYRESCIFSD-GTYTKDLTVLGVDLAKVAIIDNSPQVFR 254 (303)
Q Consensus 206 --LDp~~~~f~~rl~R~~c~~~~-g~~~KDL~~Lgrdl~~vIIIDDs~~~~~ 254 (303)
+.... +|...... ...+ .++.+-+..+|.+++.+|+|||++....
T Consensus 70 ~~~~~~~-~f~~~~~~---~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~ 117 (320)
T TIGR01686 70 DFILQAE-DFDARSIN---WGPKSESLRKIAKKLNLGTDSFLFIDDNPAERA 117 (320)
T ss_pred cccCcHH-HeeEEEEe---cCchHHHHHHHHHHhCCCcCcEEEECCCHHHHH
Confidence 65543 56544222 1122 2455666778999999999999997653
No 38
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=98.06 E-value=8e-07 Score=79.26 Aligned_cols=95 Identities=7% Similarity=0.069 Sum_probs=75.0
Q ss_pred EeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCCCCCcee-eeEeeccceecC---CcccccccccCCCCCcEE
Q 022087 169 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLIS-RRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 244 (303)
Q Consensus 169 v~~RP~l~eFL~~l~~~yEivIfTas~~~YA~~il~~LDp~~~~f~-~rl~R~~c~~~~---g~~~KDL~~Lgrdl~~vI 244 (303)
+...||+.++|+++. +.++|.|++.+.+++.+++.++-.. +|. ..+..++....+ ..|.+-+.++|.++++++
T Consensus 87 ~~~~~gv~~~L~~L~--~~~~ivTn~~~~~~~~~l~~~~l~~-~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l 163 (221)
T PRK10563 87 LEPIAGANALLESIT--VPMCVVSNGPVSKMQHSLGKTGMLH-YFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCI 163 (221)
T ss_pred CCcCCCHHHHHHHcC--CCEEEEeCCcHHHHHHHHHhcChHH-hCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 567899999999994 8999999999999999999887765 675 455554443222 256677788899999999
Q ss_pred EEECChhhhccCCCceeeeccc
Q 022087 245 IIDNSPQVFRLQVNNGIPIESW 266 (303)
Q Consensus 245 IIDDs~~~~~~~~~N~I~I~~f 266 (303)
+|+|++.........|+++.-+
T Consensus 164 ~igDs~~di~aA~~aG~~~i~~ 185 (221)
T PRK10563 164 LVDDSSAGAQSGIAAGMEVFYF 185 (221)
T ss_pred EEeCcHhhHHHHHHCCCEEEEE
Confidence 9999998887777778776543
No 39
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=98.03 E-value=1.3e-05 Score=69.73 Aligned_cols=117 Identities=15% Similarity=0.104 Sum_probs=77.4
Q ss_pred ceEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhc-ceEEEEEcCCcH------------
Q 022087 130 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQS------------ 196 (303)
Q Consensus 130 k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~~-~yEivIfTas~~------------ 196 (303)
.+.|+||+||||+-....... .. -.+...||+.++|++|++ .|.++|.|++..
T Consensus 3 ~~~~~~d~~~t~~~~~~~~~~------------~~--~~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~ 68 (181)
T PRK08942 3 MKAIFLDRDGVINVDSDGYVK------------SP--DEWIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLN 68 (181)
T ss_pred ccEEEEECCCCcccCCccccC------------CH--HHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHH
Confidence 368999999998654311100 00 125678999999999995 699999998863
Q ss_pred ---HHHHHHHHHhCCCCCceeeeEeeccc-----eecC---CcccccccccCCCCCcEEEEECChhhhccCCCceeee
Q 022087 197 ---IYAAQLLDILDPDGKLISRRVYRESC-----IFSD---GTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPI 263 (303)
Q Consensus 197 ---~YA~~il~~LDp~~~~f~~rl~R~~c-----~~~~---g~~~KDL~~Lgrdl~~vIIIDDs~~~~~~~~~N~I~I 263 (303)
.+...+++.++- .|...++...+ ...+ ..|.+-+..+|.+++++++|+|++.-.......|+.+
T Consensus 69 ~~~~~~~~~l~~~g~---~f~~i~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~ 143 (181)
T PRK08942 69 ALHEKMDWSLADRGG---RLDGIYYCPHHPEDGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTP 143 (181)
T ss_pred HHHHHHHHHHHHcCC---ccceEEECCCCCCCCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeE
Confidence 333444554432 35665554322 1222 2456777788999999999999998776655666543
No 40
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=98.03 E-value=1.5e-06 Score=72.98 Aligned_cols=81 Identities=12% Similarity=0.074 Sum_probs=63.8
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecCC---cccccccccCCCCCcEE
Q 022087 169 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 244 (303)
Q Consensus 169 v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~g---~~~KDL~~Lgrdl~~vI 244 (303)
....||+.++|+++. +.+.++|.|++.+..+..+++.+ - ..+|...+..+++. .+. .|.+-++++|.++ +++
T Consensus 63 ~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l-~~~f~~i~~~~~~~-~Kp~~~~~~~~~~~~~~~~-~~l 138 (154)
T TIGR01549 63 EAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-L-GDYFDLILGSDEFG-AKPEPEIFLAALESLGLPP-EVL 138 (154)
T ss_pred heeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-H-HhcCcEEEecCCCC-CCcCHHHHHHHHHHcCCCC-CEE
Confidence 455699999999996 67999999999999999999985 2 34677777766654 332 4566677888888 999
Q ss_pred EEECChhhh
Q 022087 245 IIDNSPQVF 253 (303)
Q Consensus 245 IIDDs~~~~ 253 (303)
+|.|++.-.
T Consensus 139 ~iGDs~~Di 147 (154)
T TIGR01549 139 HVGDNLNDI 147 (154)
T ss_pred EEeCCHHHH
Confidence 999997544
No 41
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=97.97 E-value=6.5e-06 Score=76.95 Aligned_cols=128 Identities=11% Similarity=0.078 Sum_probs=92.9
Q ss_pred CCceEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHh
Q 022087 128 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDIL 206 (303)
Q Consensus 128 ~~k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~L 206 (303)
.++..+++|+||||......... +. . ...-....|++.++|+++. +.+.++|.|+.....++.+++.|
T Consensus 156 ~~~~~~~~D~dgtl~~~~~~~~~--~~------~---~~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l 224 (300)
T PHA02530 156 GLPKAVIFDIDGTLAKMGGRSPY--DW------T---KVKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWL 224 (300)
T ss_pred CCCCEEEEECCCcCcCCCCCCcc--ch------h---hcccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHH
Confidence 34578999999999876432110 10 0 0112457999999999998 56999999999999999999999
Q ss_pred CCCCCceeeeEeecc-------ceecCC---cccccccccCC-CCCcEEEEECChhhhccCCCceeeeccc
Q 022087 207 DPDGKLISRRVYRES-------CIFSDG---TYTKDLTVLGV-DLAKVAIIDNSPQVFRLQVNNGIPIESW 266 (303)
Q Consensus 207 Dp~~~~f~~rl~R~~-------c~~~~g---~~~KDL~~Lgr-dl~~vIIIDDs~~~~~~~~~N~I~I~~f 266 (303)
+..+.+|+..+..+. +...+. .+.+.|..++. +.+.++.|||++........+||++-..
T Consensus 225 ~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v 295 (300)
T PHA02530 225 RQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQV 295 (300)
T ss_pred HHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEEEe
Confidence 988767776666552 111111 23455666777 6799999999999998888888886543
No 42
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=97.83 E-value=8e-06 Score=89.27 Aligned_cols=97 Identities=10% Similarity=0.097 Sum_probs=80.5
Q ss_pred eCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecCC---cccccccccCCCCCcEEEE
Q 022087 171 QRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVAII 246 (303)
Q Consensus 171 ~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~g---~~~KDL~~Lgrdl~~vIII 246 (303)
..||+.++|++|. +.+.++|.|++...+++.+++.++-...+|+..+..+++...+. .|.+-++++|.+++++++|
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v~I 241 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVI 241 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEEEE
Confidence 5799999999998 67999999999999999999998765447898888877654442 5777788999999999999
Q ss_pred ECChhhhccCCCceeeecccc
Q 022087 247 DNSPQVFRLQVNNGIPIESWF 267 (303)
Q Consensus 247 DDs~~~~~~~~~N~I~I~~f~ 267 (303)
+|++.-+......|+..-...
T Consensus 242 gDs~~Di~AA~~aGm~~I~v~ 262 (1057)
T PLN02919 242 EDALAGVQAARAAGMRCIAVT 262 (1057)
T ss_pred cCCHHHHHHHHHcCCEEEEEC
Confidence 999988877777777665443
No 43
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=97.82 E-value=2e-05 Score=72.33 Aligned_cols=132 Identities=11% Similarity=0.111 Sum_probs=78.8
Q ss_pred CCCceEEEEecCcccccccccccC-----CC-Ccee--EEE-ecc--eeeeEEEeeCchHHHHHHHhh-cceEEEEEcCC
Q 022087 127 GRKSVTLVLDLDETLVHSTLEYCD-----DA-DFTF--TVF-FNM--KEHTVYVKQRPHLKTFLERVA-EMFEVVIFTAS 194 (303)
Q Consensus 127 ~~~k~tLVLDLDeTLvhs~~~~~~-----~~-d~~~--~v~-~~~--~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas 194 (303)
.++++.++|||||||++|+..... +. ++.. .-. ++. ....-.....|++.+||+++. +.+.++|-|+.
T Consensus 60 ~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G~~i~iVTnr 139 (237)
T TIGR01672 60 GRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIFFVTGR 139 (237)
T ss_pred CCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHCCCEEEEEeCC
Confidence 455679999999999999762100 10 0000 000 000 000112344455999999998 57999999998
Q ss_pred ----cHHHHHHHHHHhCCCCCceeeeEeeccceecCCcccccccccCCCCCcEEEEECChhhhccCCCceeee
Q 022087 195 ----QSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPI 263 (303)
Q Consensus 195 ----~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~g~~~KDL~~Lgrdl~~vIIIDDs~~~~~~~~~N~I~I 263 (303)
.+.+++.+++.++-.. +|...+..+.....+ +-|. ..+. ...-++.|-|+..-+.....+|+..
T Consensus 140 ~~~k~~~~a~~ll~~lGi~~-~f~~i~~~d~~~~~K--p~~~-~~l~-~~~i~i~vGDs~~DI~aAk~AGi~~ 207 (237)
T TIGR01672 140 TPGKTDTVSKTLAKNFHIPA-MNPVIFAGDKPGQYQ--YTKT-QWIQ-DKNIRIHYGDSDNDITAAKEAGARG 207 (237)
T ss_pred CCCcCHHHHHHHHHHhCCch-heeEEECCCCCCCCC--CCHH-HHHH-hCCCeEEEeCCHHHHHHHHHCCCCE
Confidence 6779999999998765 676555544432111 1121 1121 1233789999988776655666653
No 44
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=97.81 E-value=1.9e-05 Score=65.98 Aligned_cols=94 Identities=18% Similarity=0.310 Sum_probs=78.0
Q ss_pred EEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecCC---cccccccccCCCCCcE
Q 022087 168 YVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKV 243 (303)
Q Consensus 168 ~v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~g---~~~KDL~~Lgrdl~~v 243 (303)
.....||+.++|++++ +.+.++|.|.+...++..+++.+... .+|+..++.++....+. .|.+-++.+|.+++++
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~-~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~ 153 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLD-DYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEEI 153 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHG-GGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGGE
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccc-cccccccccchhhhhhhHHHHHHHHHHHcCCCcceE
Confidence 4789999999999999 89999999999999999999999877 48998888776654433 4667777889999999
Q ss_pred EEEECChhhhccCCCceee
Q 022087 244 AIIDNSPQVFRLQVNNGIP 262 (303)
Q Consensus 244 IIIDDs~~~~~~~~~N~I~ 262 (303)
++|||++.........|+.
T Consensus 154 ~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 154 LFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp EEEESSHHHHHHHHHTTSE
T ss_pred EEEeCCHHHHHHHHHcCCe
Confidence 9999999777655555554
No 45
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=97.75 E-value=6.6e-05 Score=65.10 Aligned_cols=107 Identities=17% Similarity=0.255 Sum_probs=68.1
Q ss_pred ceEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCcHH-----------
Q 022087 130 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSI----------- 197 (303)
Q Consensus 130 k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~~~----------- 197 (303)
+++++||+||||+-+....... ..... +...-||+.+.|++|. +.|.++|.|++...
T Consensus 13 ~k~~~~D~Dgtl~~~~~~~~~~----------~~~~~-~~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~ 81 (166)
T TIGR01664 13 SKVAAFDLDGTLITTRSGKVFP----------TSASD-WRFLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFK 81 (166)
T ss_pred CcEEEEeCCCceEecCCCCccc----------CChHH-eEEecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHH
Confidence 3579999999999653211000 00011 1224599999999997 78999999997763
Q ss_pred -HHHHHHHHhCCCCCceeeeEeeccceecC---CcccccccccC--CCCCcEEEEECCh
Q 022087 198 -YAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLG--VDLAKVAIIDNSP 250 (303)
Q Consensus 198 -YA~~il~~LDp~~~~f~~rl~R~~c~~~~---g~~~KDL~~Lg--rdl~~vIIIDDs~ 250 (303)
++..+++.++.. +...+..+.....+ +.+..-+..+| .+++++++|.|++
T Consensus 82 ~~i~~~l~~~gl~---~~~ii~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~ 137 (166)
T TIGR01664 82 NKIEAFLEKLKVP---IQVLAATHAGLYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAA 137 (166)
T ss_pred HHHHHHHHHcCCC---EEEEEecCCCCCCCCccHHHHHHHHHcCCCCCchhcEEEECCC
Confidence 567778877753 22233322221111 23444456677 8899999999997
No 46
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=97.74 E-value=6.1e-06 Score=82.27 Aligned_cols=92 Identities=13% Similarity=0.172 Sum_probs=70.8
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeecccee-cC-CcccccccccCCCCCcEEE
Q 022087 169 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIF-SD-GTYTKDLTVLGVDLAKVAI 245 (303)
Q Consensus 169 v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~-~~-g~~~KDL~~Lgrdl~~vII 245 (303)
+...||+.++|+++. +.+.++|.|++.+.++..+++.++-.. +|+..+..+.... .+ ..|.+-++.+ +++++++
T Consensus 329 ~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~-~f~~i~~~d~v~~~~kP~~~~~al~~l--~~~~~v~ 405 (459)
T PRK06698 329 GALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQ-WVTETFSIEQINSLNKSDLVKSILNKY--DIKEAAV 405 (459)
T ss_pred CCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHh-hcceeEecCCCCCCCCcHHHHHHHHhc--CcceEEE
Confidence 567899999999997 679999999999999999999998765 7888877665421 11 1333444444 4688999
Q ss_pred EECChhhhccCCCceeee
Q 022087 246 IDNSPQVFRLQVNNGIPI 263 (303)
Q Consensus 246 IDDs~~~~~~~~~N~I~I 263 (303)
|.|++.-+......|+..
T Consensus 406 VGDs~~Di~aAk~AG~~~ 423 (459)
T PRK06698 406 VGDRLSDINAAKDNGLIA 423 (459)
T ss_pred EeCCHHHHHHHHHCCCeE
Confidence 999998777766677654
No 47
>PRK06769 hypothetical protein; Validated
Probab=97.70 E-value=5e-05 Score=66.07 Aligned_cols=116 Identities=17% Similarity=0.206 Sum_probs=72.3
Q ss_pred eEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHH-----HHHHHH
Q 022087 131 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIY-----AAQLLD 204 (303)
Q Consensus 131 ~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~~~Y-----A~~il~ 204 (303)
..|+||+||||.-... + .+.-.+..-||+.++|++|. +.|.++|.|++.... ......
T Consensus 5 ~~~~~d~d~~~~~~~~-----------~-----~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~ 68 (173)
T PRK06769 5 QAIFIDRDGTIGGDTT-----------I-----HYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQ 68 (173)
T ss_pred cEEEEeCCCcccCCCC-----------C-----CCHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHH
Confidence 4789999999941100 0 00012456899999999998 579999999876421 112333
Q ss_pred HhCCCCCceeeeEe-----eccceecC---CcccccccccCCCCCcEEEEECChhhhccCCCceeeec
Q 022087 205 ILDPDGKLISRRVY-----RESCIFSD---GTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIE 264 (303)
Q Consensus 205 ~LDp~~~~f~~rl~-----R~~c~~~~---g~~~KDL~~Lgrdl~~vIIIDDs~~~~~~~~~N~I~I~ 264 (303)
.+...+ |...+. .+.+...+ +.|.+-++++|.+++++++|+|++.-.......|+..-
T Consensus 69 ~l~~~g--~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i 134 (173)
T PRK06769 69 ELKGFG--FDDIYLCPHKHGDGCECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTI 134 (173)
T ss_pred HHHhCC--cCEEEECcCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEE
Confidence 333333 233222 12112222 25677788889999999999999987766555666554
No 48
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=97.67 E-value=3.2e-05 Score=69.86 Aligned_cols=88 Identities=20% Similarity=0.271 Sum_probs=70.3
Q ss_pred EeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccc---------eecCCcccccccccCCC
Q 022087 169 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESC---------IFSDGTYTKDLTVLGVD 239 (303)
Q Consensus 169 v~~RP~l~eFL~~l~~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c---------~~~~g~~~KDL~~Lgrd 239 (303)
++.-|-++++|-.|.+.+ .++||.+.+.-|..+++.|+... +|...++.+-- .-..+.|.|-.+..|.+
T Consensus 99 LkPD~~LRnlLL~l~~r~-k~~FTNa~k~HA~r~Lk~LGieD-cFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~ 176 (244)
T KOG3109|consen 99 LKPDPVLRNLLLSLKKRR-KWIFTNAYKVHAIRILKKLGIED-CFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGID 176 (244)
T ss_pred cCCCHHHHHHHHhCcccc-EEEecCCcHHHHHHHHHHhChHH-hccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCC
Confidence 667778999999998777 89999999999999999999886 78888875422 22233566777778887
Q ss_pred -CCcEEEEECChhhhccCCC
Q 022087 240 -LAKVAIIDNSPQVFRLQVN 258 (303)
Q Consensus 240 -l~~vIIIDDs~~~~~~~~~ 258 (303)
++|++++|||....+....
T Consensus 177 ~p~~t~FfDDS~~NI~~ak~ 196 (244)
T KOG3109|consen 177 SPRNTYFFDDSERNIQTAKE 196 (244)
T ss_pred CcCceEEEcCchhhHHHHHh
Confidence 9999999999988755443
No 49
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=97.66 E-value=4.5e-05 Score=65.12 Aligned_cols=92 Identities=20% Similarity=0.256 Sum_probs=72.2
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecC---CcccccccccCCCCCcEE
Q 022087 169 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 244 (303)
Q Consensus 169 v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~---g~~~KDL~~Lgrdl~~vI 244 (303)
+...||+.++|++++ +.+.++|.|++...+ ..++..++..+ +|+..++.+.....+ ..|.+-++.+|.++++++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~-~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 161 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRD-LFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECL 161 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHH-HCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEE
Confidence 567899999999998 579999999999998 66666677664 788888766554333 246666778899999999
Q ss_pred EEECChhhhccCCCceee
Q 022087 245 IIDNSPQVFRLQVNNGIP 262 (303)
Q Consensus 245 IIDDs~~~~~~~~~N~I~ 262 (303)
+|+|++.........|+.
T Consensus 162 ~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 162 FVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred EEcCCHHHHHHHHHcCCE
Confidence 999999877665556654
No 50
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.63 E-value=4.1e-05 Score=68.85 Aligned_cols=94 Identities=17% Similarity=0.151 Sum_probs=75.2
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecCC---cccccccccCCCCCcEE
Q 022087 169 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 244 (303)
Q Consensus 169 v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~g---~~~KDL~~Lgrdl~~vI 244 (303)
...-||+.+.|+.++ +.|.++|.|+.....++.+++.++-.. +|+..+..+.....+. ....-+..+|.++++++
T Consensus 88 ~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~-~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l 166 (220)
T COG0546 88 SRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLAD-YFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEAL 166 (220)
T ss_pred CccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcc-ccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheE
Confidence 467899999999999 679999999999999999999999875 8887777444433333 23455667788877999
Q ss_pred EEECChhhhccCCCceeee
Q 022087 245 IIDNSPQVFRLQVNNGIPI 263 (303)
Q Consensus 245 IIDDs~~~~~~~~~N~I~I 263 (303)
+|=|+..-......+|++.
T Consensus 167 ~VGDs~~Di~aA~~Ag~~~ 185 (220)
T COG0546 167 MVGDSLNDILAAKAAGVPA 185 (220)
T ss_pred EECCCHHHHHHHHHcCCCE
Confidence 9999999887776677553
No 51
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=97.60 E-value=8.2e-05 Score=68.12 Aligned_cols=97 Identities=16% Similarity=0.249 Sum_probs=81.7
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecCC---cccccccccCCCCCcEE
Q 022087 169 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 244 (303)
Q Consensus 169 v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~g---~~~KDL~~Lgrdl~~vI 244 (303)
+...||+.++|++|. +.+.++|-|++.+.+++.+++.++-.. +|+..+..+.+...+. .|.+-+.++|.++++++
T Consensus 107 ~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~-~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l 185 (248)
T PLN02770 107 LKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSD-FFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTF 185 (248)
T ss_pred CCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChh-hCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHEE
Confidence 667899999999997 679999999999999999999998775 8998888877654433 56777888999999999
Q ss_pred EEECChhhhccCCCceeeeccc
Q 022087 245 IIDNSPQVFRLQVNNGIPIESW 266 (303)
Q Consensus 245 IIDDs~~~~~~~~~N~I~I~~f 266 (303)
+|+|++.-......+|+..-..
T Consensus 186 ~vgDs~~Di~aA~~aGi~~i~v 207 (248)
T PLN02770 186 VFEDSVSGIKAGVAAGMPVVGL 207 (248)
T ss_pred EEcCCHHHHHHHHHCCCEEEEE
Confidence 9999998887777778876543
No 52
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=97.60 E-value=5.7e-05 Score=67.02 Aligned_cols=95 Identities=15% Similarity=0.178 Sum_probs=76.3
Q ss_pred EeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecCC---cccccccccCCCCCcEE
Q 022087 169 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 244 (303)
Q Consensus 169 v~~RP~l~eFL~~l~~-~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~g---~~~KDL~~Lgrdl~~vI 244 (303)
+.+.||+.++|+++.+ .+.++|.|++...++...++.++-.. +|+..+..+.....+. .|.+-++++|.+++++|
T Consensus 93 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 171 (221)
T TIGR02253 93 LRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRD-FFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEAV 171 (221)
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHH-hccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhEE
Confidence 6789999999999985 59999999999999999999998765 8888887766543332 56777888999999999
Q ss_pred EEECCh-hhhccCCCceeeec
Q 022087 245 IIDNSP-QVFRLQVNNGIPIE 264 (303)
Q Consensus 245 IIDDs~-~~~~~~~~N~I~I~ 264 (303)
+|.|++ .-.......|+...
T Consensus 172 ~igDs~~~di~~A~~aG~~~i 192 (221)
T TIGR02253 172 MVGDRLDKDIKGAKNLGMKTV 192 (221)
T ss_pred EECCChHHHHHHHHHCCCEEE
Confidence 999998 45555555555543
No 53
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=97.59 E-value=8.2e-05 Score=64.49 Aligned_cols=109 Identities=17% Similarity=0.145 Sum_probs=75.9
Q ss_pred CCceEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhc-ceEEEEEcCCc-HHHHHHHHHH
Q 022087 128 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQ-SIYAAQLLDI 205 (303)
Q Consensus 128 ~~k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~~-~yEivIfTas~-~~YA~~il~~ 205 (303)
.+-..+|+|+||||..... ...-|++.++|++|.+ .+.++|.|++. ...+..+++.
T Consensus 23 ~~v~~vv~D~Dgtl~~~~~----------------------~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~ 80 (170)
T TIGR01668 23 VGIKGVVLDKDNTLVYPDH----------------------NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKA 80 (170)
T ss_pred CCCCEEEEecCCccccCCC----------------------CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHH
Confidence 4556899999999986421 2346999999999984 59999999998 6788888777
Q ss_pred hCCCCCceeeeEeeccceecCCcccccccccCCCCCcEEEEECCh-hhhccCCCceeeecc
Q 022087 206 LDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSP-QVFRLQVNNGIPIES 265 (303)
Q Consensus 206 LDp~~~~f~~rl~R~~c~~~~g~~~KDL~~Lgrdl~~vIIIDDs~-~~~~~~~~N~I~I~~ 265 (303)
++... + . ....-....|.+-++.+|.+.+++++|+|+. .-......+|+..--
T Consensus 81 ~gl~~-~-----~-~~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~ 134 (170)
T TIGR01668 81 LGIPV-L-----P-HAVKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTIL 134 (170)
T ss_pred cCCEE-E-----c-CCCCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEE
Confidence 65321 1 1 1111122245566778899999999999998 355555556665443
No 54
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=97.58 E-value=0.0002 Score=69.52 Aligned_cols=121 Identities=17% Similarity=0.164 Sum_probs=81.5
Q ss_pred CceEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCC-------------
Q 022087 129 KSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTAS------------- 194 (303)
Q Consensus 129 ~k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas------------- 194 (303)
+++.|+||-||||+........ ......+...||+.++|++|. +.|.++|.|+.
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~y~------------~~~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l 68 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTDFQ------------VDSLDKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDF 68 (354)
T ss_pred CCcEEEEeCCCCccCCCCcccc------------ccCcccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHH
Confidence 3679999999999987421100 111224788999999999998 46999999995
Q ss_pred --cHHHHHHHHHHhCCCCCceeeeEee-----ccceecCC---cccccccccCCCCCcEEEEECChhhhccCCCceeeec
Q 022087 195 --QSIYAAQLLDILDPDGKLISRRVYR-----ESCIFSDG---TYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIE 264 (303)
Q Consensus 195 --~~~YA~~il~~LDp~~~~f~~rl~R-----~~c~~~~g---~~~KDL~~Lgrdl~~vIIIDDs~~~~~~~~~N~I~I~ 264 (303)
...++..+++.++- +|...++. +.|...+. .+..-+..++.+++++++|-|+..-......+|+..-
T Consensus 69 ~~~~~~i~~iL~~~gl---~fd~i~i~~~~~sd~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 69 DPPHNLMMQIFESQGI---KFDEVLICPHFPEDNCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred hhHHHHHHHHHHHcCC---ceeeEEEeCCcCcccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 24456666666544 35555544 34433322 2233345568899999999999977766666777644
No 55
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=97.56 E-value=7.4e-05 Score=64.17 Aligned_cols=88 Identities=10% Similarity=0.171 Sum_probs=61.2
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecCC-----------------ccc
Q 022087 169 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG-----------------TYT 230 (303)
Q Consensus 169 v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~g-----------------~~~ 230 (303)
+.++||+.++|+++. +.+.++|.|++...+++.+++.++-.. +|+..+..+......| ...
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~ 149 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKD-VFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCC 149 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChh-heeEEeccCceECCCCcEEEecCCCCccCcCCCCCC
Confidence 689999999999998 469999999999999999999987654 6776664332111111 111
Q ss_pred c--cccccCCC-CCcEEEEECChhhhccCC
Q 022087 231 K--DLTVLGVD-LAKVAIIDNSPQVFRLQV 257 (303)
Q Consensus 231 K--DL~~Lgrd-l~~vIIIDDs~~~~~~~~ 257 (303)
| -+..+... .+++|+|+|+..-+....
T Consensus 150 K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~ 179 (188)
T TIGR01489 150 KGKVIHKLSEPKYQHIIYIGDGVTDVCPAK 179 (188)
T ss_pred HHHHHHHHHhhcCceEEEECCCcchhchHh
Confidence 2 22233333 688999999987765543
No 56
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.52 E-value=9.1e-05 Score=65.22 Aligned_cols=97 Identities=15% Similarity=0.122 Sum_probs=77.8
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecCC---cccccccccCCCCCcEE
Q 022087 169 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 244 (303)
Q Consensus 169 v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~g---~~~KDL~~Lgrdl~~vI 244 (303)
+..+||+.++|+.+. +.+.++|.|++.+.+++.+++.++-.+ +|+..+..+.....+. .|.+-++.+|.++++++
T Consensus 84 ~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~ 162 (213)
T TIGR01449 84 TSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAK-YFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQMV 162 (213)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHh-hCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHeE
Confidence 578999999999998 569999999999999999999998765 7877666654332222 46677788999999999
Q ss_pred EEECChhhhccCCCceeeeccc
Q 022087 245 IIDNSPQVFRLQVNNGIPIESW 266 (303)
Q Consensus 245 IIDDs~~~~~~~~~N~I~I~~f 266 (303)
+|+|++.-.......|++....
T Consensus 163 ~igDs~~d~~aa~~aG~~~i~v 184 (213)
T TIGR01449 163 YVGDSRVDIQAARAAGCPSVLL 184 (213)
T ss_pred EeCCCHHHHHHHHHCCCeEEEE
Confidence 9999998887766677766543
No 57
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=97.50 E-value=0.00036 Score=65.33 Aligned_cols=70 Identities=20% Similarity=0.264 Sum_probs=57.3
Q ss_pred CceEEEEecCcccccccccccCCCCceeEEEecceeeeEEEee-CchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHh
Q 022087 129 KSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQ-RPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDIL 206 (303)
Q Consensus 129 ~k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~-RP~l~eFL~~l~~-~yEivIfTas~~~YA~~il~~L 206 (303)
++-.+|+|||.|||..... +.+ -|.+-+-|.++.+ +.-+++||.|.+++|..-++.+
T Consensus 121 ~phVIVfDlD~TLItd~~~---------------------v~Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~ 179 (297)
T PF05152_consen 121 PPHVIVFDLDSTLITDEGD---------------------VRIRDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKEL 179 (297)
T ss_pred CCcEEEEECCCcccccCCc---------------------cccCChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHh
Confidence 4458999999999977432 222 3888899999995 4599999999999999999999
Q ss_pred CCCCCceeeeEeec
Q 022087 207 DPDGKLISRRVYRE 220 (303)
Q Consensus 207 Dp~~~~f~~rl~R~ 220 (303)
+..+ +|+..+.+.
T Consensus 180 ~L~~-~Fd~ii~~G 192 (297)
T PF05152_consen 180 KLEG-YFDIIICGG 192 (297)
T ss_pred CCcc-ccEEEEeCC
Confidence 9875 898888754
No 58
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=97.50 E-value=9.7e-05 Score=64.66 Aligned_cols=94 Identities=15% Similarity=0.190 Sum_probs=76.2
Q ss_pred EeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecC---CcccccccccCCCCCcEE
Q 022087 169 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 244 (303)
Q Consensus 169 v~~RP~l~eFL~~l~~-~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~---g~~~KDL~~Lgrdl~~vI 244 (303)
+...||+.++|+++.+ .|.++|.|++...++..+++.++-. .+|+..+..++....+ ..|.+-++.+|.++++++
T Consensus 91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~-~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~ 169 (198)
T TIGR01428 91 LPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLD-DPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVL 169 (198)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCCh-hhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEE
Confidence 5678999999999996 5999999999999999999998765 3788888877654333 246667778899999999
Q ss_pred EEECChhhhccCCCceeee
Q 022087 245 IIDNSPQVFRLQVNNGIPI 263 (303)
Q Consensus 245 IIDDs~~~~~~~~~N~I~I 263 (303)
+|+|++.-......+|+..
T Consensus 170 ~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 170 FVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred EEeCCHHHHHHHHHCCCcE
Confidence 9999997776666666654
No 59
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=97.49 E-value=0.00031 Score=64.60 Aligned_cols=130 Identities=13% Similarity=0.117 Sum_probs=76.3
Q ss_pred CCCceEEEEecCcccccccccccC-CC-------Cc----eeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcC
Q 022087 127 GRKSVTLVLDLDETLVHSTLEYCD-DA-------DF----TFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTA 193 (303)
Q Consensus 127 ~~~k~tLVLDLDeTLvhs~~~~~~-~~-------d~----~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTa 193 (303)
.++++.++||+|||+++++....- .. ++ .+--++. .....+....||+.+||+++. +.++|++-|+
T Consensus 60 ~~~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~-~~~~~~a~p~~Ga~elL~~L~~~G~~I~iVTn 138 (237)
T PRK11009 60 GRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMN-NGWDEFSIPKEVARQLIDMHVKRGDSIYFITG 138 (237)
T ss_pred CCCCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHH-hcccccCcchHHHHHHHHHHHHCCCeEEEEeC
Confidence 455679999999999997532110 00 01 0000000 001234556667999999995 7899999998
Q ss_pred C----cHHHHHHHHHHhCC-CCCceeeeEeeccceecCCcccccccccCCCCCcEEEEECChhhhccCCCceeee
Q 022087 194 S----QSIYAAQLLDILDP-DGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPI 263 (303)
Q Consensus 194 s----~~~YA~~il~~LDp-~~~~f~~rl~R~~c~~~~g~~~KDL~~Lgrdl~~vIIIDDs~~~~~~~~~N~I~I 263 (303)
- ...+++.+++.++- ...+|...+..+.. .+..-..-+.. ..-+|+|-|+..-+......|+..
T Consensus 139 R~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--~K~~K~~~l~~----~~i~I~IGDs~~Di~aA~~AGi~~ 207 (237)
T PRK11009 139 RTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--GQYTKTQWLKK----KNIRIFYGDSDNDITAAREAGARG 207 (237)
T ss_pred CCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC--CCCCHHHHHHh----cCCeEEEcCCHHHHHHHHHcCCcE
Confidence 4 56789999987765 23467555544432 11111111112 223899999988776655555553
No 60
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=97.47 E-value=0.0001 Score=65.24 Aligned_cols=94 Identities=14% Similarity=0.096 Sum_probs=76.6
Q ss_pred EeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecCC---ccccccccc-CCCCCcEE
Q 022087 169 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVL-GVDLAKVA 244 (303)
Q Consensus 169 v~~RP~l~eFL~~l~~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~g---~~~KDL~~L-grdl~~vI 244 (303)
+..+||+.++|+++.+.+.++|-|++...++..+++.++-.+ +|+..+..+.+...+. .|.+-++++ |.+++++|
T Consensus 96 ~~~~~g~~~~L~~l~~~~~~~i~Sn~~~~~~~~~l~~~~l~~-~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v 174 (224)
T TIGR02254 96 HQLLPGAFELMENLQQKFRLYIVTNGVRETQYKRLRKSGLFP-FFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEEVL 174 (224)
T ss_pred CeeCccHHHHHHHHHhcCcEEEEeCCchHHHHHHHHHCCcHh-hcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchheE
Confidence 578999999999999669999999999999999999988765 7988888776654432 466778889 99999999
Q ss_pred EEECCh-hhhccCCCceeee
Q 022087 245 IIDNSP-QVFRLQVNNGIPI 263 (303)
Q Consensus 245 IIDDs~-~~~~~~~~N~I~I 263 (303)
+|+|++ .-......+|++.
T Consensus 175 ~igD~~~~di~~A~~~G~~~ 194 (224)
T TIGR02254 175 MIGDSLTADIKGGQNAGLDT 194 (224)
T ss_pred EECCCcHHHHHHHHHCCCcE
Confidence 999997 4565555566544
No 61
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=97.43 E-value=3.7e-05 Score=67.51 Aligned_cols=94 Identities=17% Similarity=0.155 Sum_probs=63.0
Q ss_pred EeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeec-ccee-----cCC-cccccccccCCCCC
Q 022087 169 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRE-SCIF-----SDG-TYTKDLTVLGVDLA 241 (303)
Q Consensus 169 v~~RP~l~eFL~~l~~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~-~c~~-----~~g-~~~KDL~~Lgrdl~ 241 (303)
+..+||+.++|+.+.+.+.++|.|++...+++.+++.++-.. +|...+.-+ +-.. ..+ ....-+..++...+
T Consensus 67 ~~~~pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l~~~gl~~-~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~~~~ 145 (205)
T PRK13582 67 LDPLPGAVEFLDWLRERFQVVILSDTFYEFAGPLMRQLGWPT-LFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKSLGY 145 (205)
T ss_pred CCCCCCHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHcCCch-hhcceEEECCCCeEECccccccchHHHHHHHHHHhCC
Confidence 567899999999999669999999999999999999988653 665544321 1100 011 11111223444557
Q ss_pred cEEEEECChhhhccCCCceeee
Q 022087 242 KVAIIDNSPQVFRLQVNNGIPI 263 (303)
Q Consensus 242 ~vIIIDDs~~~~~~~~~N~I~I 263 (303)
+++.|-|+..-......+|+.+
T Consensus 146 ~~v~iGDs~~D~~~~~aa~~~v 167 (205)
T PRK13582 146 RVIAAGDSYNDTTMLGEADAGI 167 (205)
T ss_pred eEEEEeCCHHHHHHHHhCCCCE
Confidence 8999999998765544444444
No 62
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=97.39 E-value=0.00016 Score=63.60 Aligned_cols=100 Identities=13% Similarity=0.140 Sum_probs=77.4
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecCC---cccccccccCCCCCcEE
Q 022087 169 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 244 (303)
Q Consensus 169 v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~g---~~~KDL~~Lgrdl~~vI 244 (303)
...+||+.++|+++. +.+.++|.|++....+..++.....-..+|+..++.+++...+. .|.+-++.+|.++++++
T Consensus 83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l 162 (199)
T PRK09456 83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADAV 162 (199)
T ss_pred hccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHeE
Confidence 457899999999998 57999999999988776655432222347888888777655443 46677888999999999
Q ss_pred EEECChhhhccCCCceeeeccccC
Q 022087 245 IIDNSPQVFRLQVNNGIPIESWFD 268 (303)
Q Consensus 245 IIDDs~~~~~~~~~N~I~I~~f~~ 268 (303)
+|||++.........|+...-+.+
T Consensus 163 ~vgD~~~di~aA~~aG~~~i~~~~ 186 (199)
T PRK09456 163 FFDDNADNIEAANALGITSILVTD 186 (199)
T ss_pred EeCCCHHHHHHHHHcCCEEEEecC
Confidence 999999888777778888765544
No 63
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=97.38 E-value=0.00021 Score=61.00 Aligned_cols=112 Identities=19% Similarity=0.206 Sum_probs=75.8
Q ss_pred eEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCC
Q 022087 131 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 209 (303)
Q Consensus 131 ~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~ 209 (303)
+.++||+||||+.-...... + .+..-++.++|+. -+++|. +.+.++|-|+..+..+..+++.+...
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~~----------~-~~~~~~~~~~~~~--~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~ 68 (154)
T TIGR01670 2 RLLILDVDGVLTDGKIYYTN----------N-GEEIKAFNVRDGY--GIRCALKSGIEVAIITGRKAKLVEDRCKTLGIT 68 (154)
T ss_pred eEEEEeCceeEEcCeEEECC----------C-CcEEEEEechhHH--HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCC
Confidence 47899999999953211100 1 1111234677776 688887 57999999999999999999998765
Q ss_pred CCceeeeEeeccceecCC-cccccccccCCCCCcEEEEECChhhhccCCCceeee
Q 022087 210 GKLISRRVYRESCIFSDG-TYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPI 263 (303)
Q Consensus 210 ~~~f~~rl~R~~c~~~~g-~~~KDL~~Lgrdl~~vIIIDDs~~~~~~~~~N~I~I 263 (303)
. +|... ..+. .+.+-++.+|.++++++.|-|+..-...-...|+.+
T Consensus 69 ~-~~~~~-------~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~ 115 (154)
T TIGR01670 69 H-LYQGQ-------SNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLSV 115 (154)
T ss_pred E-EEecc-------cchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeE
Confidence 3 55421 1222 233445677889999999999998776655555553
No 64
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.37 E-value=0.0002 Score=64.02 Aligned_cols=101 Identities=14% Similarity=0.076 Sum_probs=82.0
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecCC---cccccccccCCCCCcEE
Q 022087 169 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 244 (303)
Q Consensus 169 v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~g---~~~KDL~~Lgrdl~~vI 244 (303)
....||+.++|+++. +.+.++|.|++....++.+++.+.-.+ +|+..+.++.....+. .|..-++.+|.++++++
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 169 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRD-YFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLTCV 169 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchh-cccEEEEcccCCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence 567899999999998 679999999999999999999988765 7888877765443332 46667788899999999
Q ss_pred EEECChhhhccCCCceeeeccccCCC
Q 022087 245 IIDNSPQVFRLQVNNGIPIESWFDDP 270 (303)
Q Consensus 245 IIDDs~~~~~~~~~N~I~I~~f~~d~ 270 (303)
+|+|++.-.......|++.--+....
T Consensus 170 ~igDs~~Di~aA~~aG~~~i~v~~~~ 195 (222)
T PRK10826 170 ALEDSFNGMIAAKAARMRSIVVPAPE 195 (222)
T ss_pred EEcCChhhHHHHHHcCCEEEEecCCc
Confidence 99999988887777888765554433
No 65
>PRK09449 dUMP phosphatase; Provisional
Probab=97.36 E-value=0.00018 Score=64.13 Aligned_cols=93 Identities=15% Similarity=0.145 Sum_probs=74.6
Q ss_pred EeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecCC---cccccccccCC-CCCcEE
Q 022087 169 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGV-DLAKVA 244 (303)
Q Consensus 169 v~~RP~l~eFL~~l~~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~g---~~~KDL~~Lgr-dl~~vI 244 (303)
+...||+.++|++|.+.|.++|.|++.+.++...++.++..+ +|+..+..+++...+. .|.+-++.+|. +.++++
T Consensus 94 ~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~~~l~~-~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~ 172 (224)
T PRK09449 94 CTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLERTGLRD-YFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRVL 172 (224)
T ss_pred CccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHhCChHH-HcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcccEE
Confidence 567899999999999889999999999999999999988775 8998888877654433 46677888886 457899
Q ss_pred EEECChh-hhccCCCceee
Q 022087 245 IIDNSPQ-VFRLQVNNGIP 262 (303)
Q Consensus 245 IIDDs~~-~~~~~~~N~I~ 262 (303)
+|+|++. -.......|+.
T Consensus 173 ~vgD~~~~Di~~A~~aG~~ 191 (224)
T PRK09449 173 MVGDNLHSDILGGINAGID 191 (224)
T ss_pred EEcCCcHHHHHHHHHCCCc
Confidence 9999974 55555455554
No 66
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=97.29 E-value=0.00016 Score=62.17 Aligned_cols=92 Identities=16% Similarity=0.194 Sum_probs=73.1
Q ss_pred EeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecCC---cccccccccCCCCCcEE
Q 022087 169 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 244 (303)
Q Consensus 169 v~~RP~l~eFL~~l~~-~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~g---~~~KDL~~Lgrdl~~vI 244 (303)
+...||+.++|+++.+ .+.++|-|++ .+++.+++.++-.+ +|+..+..+.....+. .|.+-++.+|.+++++|
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~-~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v 163 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTD-YFDAIVDADEVKEGKPHPETFLLAAELLGVSPNECV 163 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHH-HCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 6789999999999984 6999999988 78999999887764 7888877665543332 45666778899999999
Q ss_pred EEECChhhhccCCCceeee
Q 022087 245 IIDNSPQVFRLQVNNGIPI 263 (303)
Q Consensus 245 IIDDs~~~~~~~~~N~I~I 263 (303)
+|+|++.-......+|++.
T Consensus 164 ~IgD~~~di~aA~~~G~~~ 182 (185)
T TIGR02009 164 VFEDALAGVQAARAAGMFA 182 (185)
T ss_pred EEeCcHhhHHHHHHCCCeE
Confidence 9999998887766677754
No 67
>PLN02954 phosphoserine phosphatase
Probab=97.25 E-value=0.00085 Score=59.75 Aligned_cols=92 Identities=9% Similarity=0.125 Sum_probs=61.5
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCC-CceeeeEeecc-------------cee-cCCccc-c
Q 022087 169 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDG-KLISRRVYRES-------------CIF-SDGTYT-K 231 (303)
Q Consensus 169 v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~~-~~f~~rl~R~~-------------c~~-~~g~~~-K 231 (303)
..++||+.++|+++. +.+.++|-|++.+.+++.+++.++-.. .+|...+.-+. |.. .+...+ +
T Consensus 83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~ 162 (224)
T PLN02954 83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQH 162 (224)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHHH
Confidence 457899999999997 568999999999999999999987642 36655433211 100 011111 1
Q ss_pred cccccCCCCCcEEEEECChhhhccCCCceee
Q 022087 232 DLTVLGVDLAKVAIIDNSPQVFRLQVNNGIP 262 (303)
Q Consensus 232 DL~~Lgrdl~~vIIIDDs~~~~~~~~~N~I~ 262 (303)
-+..+| .+++|.|-|+..-......+|+.
T Consensus 163 ~~~~~~--~~~~i~iGDs~~Di~aa~~~~~~ 191 (224)
T PLN02954 163 IKKKHG--YKTMVMIGDGATDLEARKPGGAD 191 (224)
T ss_pred HHHHcC--CCceEEEeCCHHHHHhhhcCCCC
Confidence 112234 36899999999888775554444
No 68
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=97.24 E-value=0.00035 Score=63.73 Aligned_cols=98 Identities=12% Similarity=0.025 Sum_probs=78.2
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecCC---cccccccccCC-CCCcE
Q 022087 169 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGV-DLAKV 243 (303)
Q Consensus 169 v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~g---~~~KDL~~Lgr-dl~~v 243 (303)
+...||+.++|+++. +.+.++|-|++.+.+++.+++.++..+-+|+..+..+.....+. .|.+-++++|. +++++
T Consensus 98 ~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~ 177 (253)
T TIGR01422 98 SSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDVAAC 177 (253)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCCchhe
Confidence 567899999999998 56999999999999999999999877622477777666543332 56777788897 48999
Q ss_pred EEEECChhhhccCCCceeeeccc
Q 022087 244 AIIDNSPQVFRLQVNNGIPIESW 266 (303)
Q Consensus 244 IIIDDs~~~~~~~~~N~I~I~~f 266 (303)
|+|.|++.-......+|+..-..
T Consensus 178 l~IGDs~~Di~aA~~aGi~~i~v 200 (253)
T TIGR01422 178 VKVGDTVPDIEEGRNAGMWTVGL 200 (253)
T ss_pred EEECCcHHHHHHHHHCCCeEEEE
Confidence 99999998887777778776554
No 69
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=97.22 E-value=0.00083 Score=55.99 Aligned_cols=83 Identities=22% Similarity=0.193 Sum_probs=57.0
Q ss_pred eEEEEecCcccccccccccCCCCceeEEEecceeeeE-EEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHH--------
Q 022087 131 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTV-YVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAA-------- 200 (303)
Q Consensus 131 ~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~-~v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~-------- 200 (303)
+.+++||||||+..... .| .....+.+.+.|+++. +.++++++|+-......
T Consensus 2 K~i~~DiDGTL~~~~~~------------------~y~~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~ 63 (126)
T TIGR01689 2 KRLVMDLDNTITLTENG------------------DYANVAPILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINI 63 (126)
T ss_pred CEEEEeCCCCcccCCCC------------------cccccccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccch
Confidence 37899999999754211 01 1346889999999984 78999999998887766
Q ss_pred ----HHHHHhCCCCCceeeeEeec-cceecCCccccc
Q 022087 201 ----QLLDILDPDGKLISRRVYRE-SCIFSDGTYTKD 232 (303)
Q Consensus 201 ----~il~~LDp~~~~f~~rl~R~-~c~~~~g~~~KD 232 (303)
.+++.|+.++--++..+.|. .|. ..|.|+.|
T Consensus 64 ~~~~~t~~wL~k~~ipYd~l~~~kp~~~-~~~~~~dD 99 (126)
T TIGR01689 64 HTLPIIILWLNQHNVPYDEIYVGKPWCG-HDGFYVDD 99 (126)
T ss_pred hhHHHHHHHHHHcCCCCceEEeCCCcCC-CCCceecc
Confidence 77788877765555555543 442 33444433
No 70
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=97.16 E-value=0.00065 Score=60.79 Aligned_cols=91 Identities=16% Similarity=0.143 Sum_probs=61.4
Q ss_pred EeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecCC----------cccccccccCC
Q 022087 169 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG----------TYTKDLTVLGV 238 (303)
Q Consensus 169 v~~RP~l~eFL~~l~~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~g----------~~~KDL~~Lgr 238 (303)
+.++||+.+||+++.+.+.++|-|++...+++++++.++-.. +|..++--++.....| ..++-+...|
T Consensus 67 i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~lgi~~-~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~~~- 144 (203)
T TIGR02137 67 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPT-LLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLY- 144 (203)
T ss_pred CCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHHcCCch-hhceeeEEecCCeeECeeecCcchHHHHHHHHHhhC-
Confidence 578999999999999778999999999999999999998764 6776555332111111 1222222223
Q ss_pred CCCcEEEEECChhhhccCCCceeee
Q 022087 239 DLAKVAIIDNSPQVFRLQVNNGIPI 263 (303)
Q Consensus 239 dl~~vIIIDDs~~~~~~~~~N~I~I 263 (303)
.+++.|-|+..-..+-...|++|
T Consensus 145 --~~~v~vGDs~nDl~ml~~Ag~~i 167 (203)
T TIGR02137 145 --YRVIAAGDSYNDTTMLSEAHAGI 167 (203)
T ss_pred --CCEEEEeCCHHHHHHHHhCCCCE
Confidence 36888888887554433333333
No 71
>PRK08238 hypothetical protein; Validated
Probab=97.15 E-value=0.0014 Score=66.19 Aligned_cols=90 Identities=13% Similarity=0.092 Sum_probs=58.5
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecCCc--ccccccccCCCCCcEEE
Q 022087 169 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGT--YTKDLTVLGVDLAKVAI 245 (303)
Q Consensus 169 v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~g~--~~KDL~~Lgrdl~~vII 245 (303)
...+|++.++|+++. +.+.++|-|++.+.+++++++.++- |+..+..+.....+|. ...-.+.++ .+.++.
T Consensus 71 lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl----Fd~Vigsd~~~~~kg~~K~~~l~~~l~--~~~~~y 144 (479)
T PRK08238 71 LPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL----FDGVFASDGTTNLKGAAKAAALVEAFG--ERGFDY 144 (479)
T ss_pred CCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC----CCEEEeCCCccccCCchHHHHHHHHhC--ccCeeE
Confidence 457899999999997 6799999999999999999999853 6666655432222211 111112233 244677
Q ss_pred EECChhhhcc--CCCceeeec
Q 022087 246 IDNSPQVFRL--QVNNGIPIE 264 (303)
Q Consensus 246 IDDs~~~~~~--~~~N~I~I~ 264 (303)
+-|+..-... +-+|.+.|.
T Consensus 145 vGDS~~Dlp~~~~A~~av~Vn 165 (479)
T PRK08238 145 AGNSAADLPVWAAARRAIVVG 165 (479)
T ss_pred ecCCHHHHHHHHhCCCeEEEC
Confidence 8888754322 334666554
No 72
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=97.12 E-value=0.00085 Score=64.32 Aligned_cols=95 Identities=15% Similarity=0.171 Sum_probs=67.4
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeec----------ccee--cCCccccc-cc
Q 022087 169 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRE----------SCIF--SDGTYTKD-LT 234 (303)
Q Consensus 169 v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~----------~c~~--~~g~~~KD-L~ 234 (303)
+.++||+.++|+.+. ..+.++|.|++...+++.+++.++-.. .+...+-.. .+.. .+...++. ++
T Consensus 180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~-~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~ 258 (322)
T PRK11133 180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDA-AVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQ 258 (322)
T ss_pred CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCe-EEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHH
Confidence 678999999999998 569999999999999999999987653 333332211 1111 11122222 35
Q ss_pred ccCCCCCcEEEEECChhhhccCCCceeeec
Q 022087 235 VLGVDLAKVAIIDNSPQVFRLQVNNGIPIE 264 (303)
Q Consensus 235 ~Lgrdl~~vIIIDDs~~~~~~~~~N~I~I~ 264 (303)
.+|.++++||.|-|+..-..+-...|+.|.
T Consensus 259 ~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA 288 (322)
T PRK11133 259 EYEIPLAQTVAIGDGANDLPMIKAAGLGIA 288 (322)
T ss_pred HcCCChhhEEEEECCHHHHHHHHHCCCeEE
Confidence 678999999999999987776555666654
No 73
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=97.09 E-value=0.0011 Score=67.58 Aligned_cols=110 Identities=12% Similarity=0.165 Sum_probs=72.6
Q ss_pred CCceEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCcH----------
Q 022087 128 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQS---------- 196 (303)
Q Consensus 128 ~~k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~~---------- 196 (303)
.+.+.+.||+||||+....... | .. .... +..+-||+.+.|++|. +.|.|+|+|+...
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~~----~-----~~-~~~d-~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~ 234 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGKV----F-----PK-GPDD-WQIIFPEIPEKLKELEADGFKICIFTNQGGIARGKINADD 234 (526)
T ss_pred ccCcEEEEECCCCccccCCCcc----C-----CC-CHHH-eeecccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHH
Confidence 4457999999999997532110 0 00 0011 2234699999999998 5799999999766
Q ss_pred --HHHHHHHHHhCCCCCceeeeEeeccceecC---Cccccccccc----CCCCCcEEEEECChh
Q 022087 197 --IYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVL----GVDLAKVAIIDNSPQ 251 (303)
Q Consensus 197 --~YA~~il~~LDp~~~~f~~rl~R~~c~~~~---g~~~KDL~~L----grdl~~vIIIDDs~~ 251 (303)
..+..+++.++- .|...+..+.|.+.+ |.+..-+..+ +.+++++++|-|+..
T Consensus 235 ~~~ki~~iL~~lgi---pfdviia~~~~~~RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaag 295 (526)
T TIGR01663 235 FKAKIEAIVAKLGV---PFQVFIAIGAGFYRKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAAG 295 (526)
T ss_pred HHHHHHHHHHHcCC---ceEEEEeCCCCCCCCCCHHHHHHHHHhcCcccCCCHHHeEEeCCccc
Confidence 468888888864 366555455554443 2332222333 578999999999983
No 74
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=97.03 E-value=0.00074 Score=59.85 Aligned_cols=93 Identities=17% Similarity=0.219 Sum_probs=72.5
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecC---CcccccccccCCCCCcEE
Q 022087 169 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 244 (303)
Q Consensus 169 v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~---g~~~KDL~~Lgrdl~~vI 244 (303)
...+||+.+||+.+. +.+.++|.|++...++..+++.++-.. +|+..+..+.+...+ ..+.+-+..++.++++++
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i 170 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIAD-YFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEML 170 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCcc-CccEEEcCCCCCCCCcChHHHHHHHHHcCCChhheE
Confidence 668999999999998 579999999999999999999998764 676655554432222 135566678899999999
Q ss_pred EEECChhhhccCCCceee
Q 022087 245 IIDNSPQVFRLQVNNGIP 262 (303)
Q Consensus 245 IIDDs~~~~~~~~~N~I~ 262 (303)
+|+|++.-.......|++
T Consensus 171 ~igD~~~Di~~a~~~g~~ 188 (226)
T PRK13222 171 FVGDSRNDIQAARAAGCP 188 (226)
T ss_pred EECCCHHHHHHHHHCCCc
Confidence 999999877665556654
No 75
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=96.99 E-value=0.00083 Score=62.53 Aligned_cols=94 Identities=13% Similarity=0.132 Sum_probs=74.3
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecCC---cccccccccCCCCCcEE
Q 022087 169 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVA 244 (303)
Q Consensus 169 v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~g---~~~KDL~~Lgrdl~~vI 244 (303)
+..+||+.++|+++. +.+.++|.|++...++..+++.++-.+ +|+..+..+.+...+. .|.+-+..+|.++++++
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~-~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l 178 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGR-YFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSL 178 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHh-hCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEE
Confidence 457899999999997 579999999999999999999987654 7877666654432222 34566677899999999
Q ss_pred EEECChhhhccCCCceeee
Q 022087 245 IIDNSPQVFRLQVNNGIPI 263 (303)
Q Consensus 245 IIDDs~~~~~~~~~N~I~I 263 (303)
+|+|++.-......+|+..
T Consensus 179 ~IGD~~~Di~aA~~aGi~~ 197 (272)
T PRK13223 179 FVGDSRSDVLAAKAAGVQC 197 (272)
T ss_pred EECCCHHHHHHHHHCCCeE
Confidence 9999998887766677753
No 76
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=96.97 E-value=0.0015 Score=56.79 Aligned_cols=94 Identities=14% Similarity=0.156 Sum_probs=68.2
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecCC-------------ccccccc
Q 022087 169 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG-------------TYTKDLT 234 (303)
Q Consensus 169 v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~g-------------~~~KDL~ 234 (303)
+..+||+.++|+.+. +.+.++|.|++...+++.+++.+.... +|...+..++.....+ .+.+-+.
T Consensus 79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~-~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~ 157 (201)
T TIGR01491 79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDY-VYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKR 157 (201)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCe-EEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHH
Confidence 678999999999998 579999999999999999999998664 6666655332111111 1112234
Q ss_pred ccCCCCCcEEEEECChhhhccCCCceeee
Q 022087 235 VLGVDLAKVAIIDNSPQVFRLQVNNGIPI 263 (303)
Q Consensus 235 ~Lgrdl~~vIIIDDs~~~~~~~~~N~I~I 263 (303)
.+|.+++++++|.|+..-.......|+++
T Consensus 158 ~~~~~~~~~i~iGDs~~D~~~a~~ag~~~ 186 (201)
T TIGR01491 158 ELNPSLTETVAVGDSKNDLPMFEVADISI 186 (201)
T ss_pred HhCCCHHHEEEEcCCHhHHHHHHhcCCeE
Confidence 56888999999999997666555556654
No 77
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=96.95 E-value=0.0012 Score=60.80 Aligned_cols=98 Identities=12% Similarity=0.058 Sum_probs=76.6
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecC---CcccccccccCCC-CCcE
Q 022087 169 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVD-LAKV 243 (303)
Q Consensus 169 v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~---g~~~KDL~~Lgrd-l~~v 243 (303)
+..-||+.++|++|. +.+.++|-|++.+..+..+++.+.-.+-+|+..+..++....+ ..|.+-++++|.. ++++
T Consensus 100 ~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~e~ 179 (267)
T PRK13478 100 ATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDVAAC 179 (267)
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCcce
Confidence 467899999999997 5799999999999999999998876652346767676654333 2567778888975 6899
Q ss_pred EEEECChhhhccCCCceeeeccc
Q 022087 244 AIIDNSPQVFRLQVNNGIPIESW 266 (303)
Q Consensus 244 IIIDDs~~~~~~~~~N~I~I~~f 266 (303)
|+|+|++.-.......|+..-..
T Consensus 180 l~IGDs~~Di~aA~~aG~~~i~v 202 (267)
T PRK13478 180 VKVDDTVPGIEEGLNAGMWTVGV 202 (267)
T ss_pred EEEcCcHHHHHHHHHCCCEEEEE
Confidence 99999998887777777765443
No 78
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=96.91 E-value=0.0011 Score=62.15 Aligned_cols=97 Identities=12% Similarity=0.167 Sum_probs=72.6
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCC--CCceeeeEeeccceecCC---cccccccccCCCCCc
Q 022087 169 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD--GKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAK 242 (303)
Q Consensus 169 v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~--~~~f~~rl~R~~c~~~~g---~~~KDL~~Lgrdl~~ 242 (303)
+...||+.++|+++. +.+.++|.|++...++..+++.+.-. ..+|... ..+.+...+. .|.+-++.+|.++++
T Consensus 143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v-~~~~~~~~KP~p~~~~~a~~~~~~~p~~ 221 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVF-AGDDVPKKKPDPDIYNLAAETLGVDPSR 221 (286)
T ss_pred CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEE-eccccCCCCCCHHHHHHHHHHhCcChHH
Confidence 468999999999998 57999999999999999999876321 1223322 4444432222 456677888999999
Q ss_pred EEEEECChhhhccCCCceeeeccc
Q 022087 243 VAIIDNSPQVFRLQVNNGIPIESW 266 (303)
Q Consensus 243 vIIIDDs~~~~~~~~~N~I~I~~f 266 (303)
+|+|+|++.-+.....+|+.+-..
T Consensus 222 ~l~IGDs~~Di~aA~~aG~~~i~v 245 (286)
T PLN02779 222 CVVVEDSVIGLQAAKAAGMRCIVT 245 (286)
T ss_pred EEEEeCCHHhHHHHHHcCCEEEEE
Confidence 999999998887777777776554
No 79
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=96.88 E-value=0.00046 Score=61.00 Aligned_cols=98 Identities=18% Similarity=0.109 Sum_probs=71.1
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHH--HHHHHHHhCCCCCceeeeEeeccceecC---CcccccccccCCCCCc
Q 022087 169 VKQRPHLKTFLERVA-EMFEVVIFTASQSIY--AAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAK 242 (303)
Q Consensus 169 v~~RP~l~eFL~~l~-~~yEivIfTas~~~Y--A~~il~~LDp~~~~f~~rl~R~~c~~~~---g~~~KDL~~Lgrdl~~ 242 (303)
+...||+.++|++|. +.+.++|.|++...+ +...+..++-. .+|+..+..+++...+ ..|.+-++++|.++++
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~-~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~~ 171 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIM-ALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPEE 171 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhH-hhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHHH
Confidence 567899999999998 569999999987654 32223223322 3688777665554333 2566778889999999
Q ss_pred EEEEECChhhhccCCCceeeecccc
Q 022087 243 VAIIDNSPQVFRLQVNNGIPIESWF 267 (303)
Q Consensus 243 vIIIDDs~~~~~~~~~N~I~I~~f~ 267 (303)
+++|||++.........|+..--+.
T Consensus 172 ~l~i~D~~~di~aA~~aG~~~i~v~ 196 (211)
T TIGR02247 172 CVFLDDLGSNLKPAAALGITTIKVS 196 (211)
T ss_pred eEEEcCCHHHHHHHHHcCCEEEEEC
Confidence 9999999998877777788765443
No 80
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=96.83 E-value=0.0012 Score=59.94 Aligned_cols=95 Identities=12% Similarity=0.089 Sum_probs=71.1
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhC---CCCCceeeeEeecccee-cCCcccccccccCCCCCcE
Q 022087 169 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILD---PDGKLISRRVYRESCIF-SDGTYTKDLTVLGVDLAKV 243 (303)
Q Consensus 169 v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LD---p~~~~f~~rl~R~~c~~-~~g~~~KDL~~Lgrdl~~v 243 (303)
..+.||+.++|+++. +.+.++|+|+++..+...+++..+ -. .+|+..+....+.. ....|.+-++.+|.+++++
T Consensus 94 ~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~-~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~p~e~ 172 (220)
T TIGR01691 94 SHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLT-PYFSGYFDTTVGLKTEAQSYVKIAGQLGSPPREI 172 (220)
T ss_pred cCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchh-hhcceEEEeCcccCCCHHHHHHHHHHhCcChhHE
Confidence 568899999999997 679999999999999998888753 22 25555443222211 1135778888999999999
Q ss_pred EEEECChhhhccCCCceeeec
Q 022087 244 AIIDNSPQVFRLQVNNGIPIE 264 (303)
Q Consensus 244 IIIDDs~~~~~~~~~N~I~I~ 264 (303)
++|+|++.-.......|+...
T Consensus 173 lfVgDs~~Di~AA~~AG~~ti 193 (220)
T TIGR01691 173 LFLSDIINELDAARKAGLHTG 193 (220)
T ss_pred EEEeCCHHHHHHHHHcCCEEE
Confidence 999999987776666676653
No 81
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=96.80 E-value=0.0024 Score=58.12 Aligned_cols=94 Identities=11% Similarity=0.075 Sum_probs=64.0
Q ss_pred eEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHH--HHHHHhC
Q 022087 131 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAA--QLLDILD 207 (303)
Q Consensus 131 ~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~--~il~~LD 207 (303)
..+++|+||||.+. ...-||+.++|++|. +.+.++|.|++.+..++ ..++.++
T Consensus 9 ~~~~~D~dG~l~~~------------------------~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~g 64 (242)
T TIGR01459 9 DVFLLDLWGVIIDG------------------------NHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLG 64 (242)
T ss_pred CEEEEecccccccC------------------------CccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCC
Confidence 47899999999765 234799999999998 57999999999988776 7788887
Q ss_pred CCCCceeeeEeeccceecCCcccccccccCCCCCcEEEEECCh
Q 022087 208 PDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSP 250 (303)
Q Consensus 208 p~~~~f~~rl~R~~c~~~~g~~~KDL~~Lgrdl~~vIIIDDs~ 250 (303)
....+|+..+....... ..+..-++.+|.+.+++++|-|+.
T Consensus 65 l~~~~~~~Ii~s~~~~~--~~l~~~~~~~~~~~~~~~~vGd~~ 105 (242)
T TIGR01459 65 INADLPEMIISSGEIAV--QMILESKKRFDIRNGIIYLLGHLE 105 (242)
T ss_pred CCccccceEEccHHHHH--HHHHhhhhhccCCCceEEEeCCcc
Confidence 65325666666543221 111111233455556666666654
No 82
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=96.79 E-value=0.0015 Score=57.29 Aligned_cols=91 Identities=14% Similarity=0.091 Sum_probs=68.8
Q ss_pred eeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecCC---cccccccccCCCCCcEEE
Q 022087 170 KQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVAI 245 (303)
Q Consensus 170 ~~RP~l~eFL~~l~~-~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~g---~~~KDL~~Lgrdl~~vII 245 (303)
...||+.++|++|++ .+.++|.|++...+ ..+++.++-.+ +|+..+..+++...+. .|.+-++.+|.+++++++
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~-~~~l~~~~l~~-~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~~ 182 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSRL-RGLLEALGLLE-YFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEALH 182 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchhH-HHHHHHCCcHH-hcceEEeecccCCCCCCHHHHHHHHHHcCCChhHEEE
Confidence 568999999999985 69999999987754 77888876654 7888887766654443 466777888999999999
Q ss_pred EECCh-hhhccCCCceee
Q 022087 246 IDNSP-QVFRLQVNNGIP 262 (303)
Q Consensus 246 IDDs~-~~~~~~~~N~I~ 262 (303)
|+|++ .-.......|+.
T Consensus 183 IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 183 IGDSLRNDYQGARAAGWR 200 (203)
T ss_pred ECCCchHHHHHHHHcCCe
Confidence 99997 445444444543
No 83
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=96.77 E-value=0.0011 Score=56.96 Aligned_cols=92 Identities=15% Similarity=0.159 Sum_probs=69.6
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecC---CcccccccccCCCCCcEE
Q 022087 169 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 244 (303)
Q Consensus 169 v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~---g~~~KDL~~Lgrdl~~vI 244 (303)
....||+.++|++|. +.+.++|-|++. .+..+++.++-.. +|+..+..++-...+ ..|.+-++++|.+++++|
T Consensus 86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~~--~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v 162 (185)
T TIGR01990 86 ADVLPGIKNLLDDLKKNNIKIALASASK--NAPTVLEKLGLID-YFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECI 162 (185)
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCc--cHHHHHHhcCcHh-hCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 357899999999998 569999999764 3567888887664 788777654322222 246677788899999999
Q ss_pred EEECChhhhccCCCceeee
Q 022087 245 IIDNSPQVFRLQVNNGIPI 263 (303)
Q Consensus 245 IIDDs~~~~~~~~~N~I~I 263 (303)
+|+|++.-+.....+|+..
T Consensus 163 ~vgD~~~di~aA~~aG~~~ 181 (185)
T TIGR01990 163 GIEDAQAGIEAIKAAGMFA 181 (185)
T ss_pred EEecCHHHHHHHHHcCCEE
Confidence 9999998777766677754
No 84
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=96.77 E-value=0.0023 Score=56.06 Aligned_cols=115 Identities=16% Similarity=0.164 Sum_probs=72.2
Q ss_pred CceEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhC
Q 022087 129 KSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILD 207 (303)
Q Consensus 129 ~k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LD 207 (303)
+.+.+++|+||||+......... + .....+.. |.+ .=++.+. +.++++|-|......+..+++.+.
T Consensus 20 ~ikli~~D~Dgtl~~~~i~~~~~-~---------~~~~~~~~-~d~--~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lg 86 (183)
T PRK09484 20 NIRLLICDVDGVFSDGLIYMGNN-G---------EELKAFNV-RDG--YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLG 86 (183)
T ss_pred CceEEEEcCCeeeecCEEEEcCC-C---------CEEEEEec-cch--HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcC
Confidence 46789999999999863211000 0 11111111 221 1233444 689999999999999999999987
Q ss_pred CCCCceeeeEeeccceecC-CcccccccccCCCCCcEEEEECChhhhccCCCceeeec
Q 022087 208 PDGKLISRRVYRESCIFSD-GTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIE 264 (303)
Q Consensus 208 p~~~~f~~rl~R~~c~~~~-g~~~KDL~~Lgrdl~~vIIIDDs~~~~~~~~~N~I~I~ 264 (303)
-.. +|.. + ..+ ..+.+-+..+|.++++++.|-|+..-.......|+.+.
T Consensus 87 l~~-~f~g------~-~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~ 136 (183)
T PRK09484 87 ITH-LYQG------Q-SNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVA 136 (183)
T ss_pred Cce-eecC------C-CcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEe
Confidence 553 4431 1 111 23344566779999999999999987766555566543
No 85
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=96.75 E-value=0.0023 Score=56.65 Aligned_cols=93 Identities=14% Similarity=0.108 Sum_probs=77.4
Q ss_pred EeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecC---CcccccccccCCCCCcEEE
Q 022087 169 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVAI 245 (303)
Q Consensus 169 v~~RP~l~eFL~~l~~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~---g~~~KDL~~Lgrdl~~vII 245 (303)
+..-|++.++|+.+.+.|.++|.|.+...++...+..+.-. .+|+..++.+.....+ ..|..-++.+|.+++++++
T Consensus 98 ~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~~gl~-~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l~ 176 (229)
T COG1011 98 LPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQLGLL-DYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEALF 176 (229)
T ss_pred CccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHHcCCh-hhhheEEEecccccCCCCcHHHHHHHHHcCCCcceEEE
Confidence 67789999999999977999999999999999999999844 5899999988877554 3577778899999999999
Q ss_pred EECChhhh-ccCCCceee
Q 022087 246 IDNSPQVF-RLQVNNGIP 262 (303)
Q Consensus 246 IDDs~~~~-~~~~~N~I~ 262 (303)
|||+...- .....-|+.
T Consensus 177 VgD~~~~di~gA~~~G~~ 194 (229)
T COG1011 177 VGDSLENDILGARALGMK 194 (229)
T ss_pred ECCChhhhhHHHHhcCcE
Confidence 99999876 434334544
No 86
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=96.64 E-value=0.004 Score=54.55 Aligned_cols=81 Identities=16% Similarity=0.186 Sum_probs=65.6
Q ss_pred eCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecCC---cccccccccCCCCCcEEEE
Q 022087 171 QRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVAII 246 (303)
Q Consensus 171 ~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~g---~~~KDL~~Lgrdl~~vIII 246 (303)
..|+..++|+.+. +.+.++|.|++.+.+++.+++.++-.. +|+..+..++... +. .|.+-++.+|.+++++|+|
T Consensus 107 ~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~-~f~~~~~~~~~~~-KP~p~~~~~~~~~~~~~~~~~i~v 184 (197)
T TIGR01548 107 TLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEI-LFPVQIWMEDCPP-KPNPEPLILAAKALGVEACHAAMV 184 (197)
T ss_pred cccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchh-hCCEEEeecCCCC-CcCHHHHHHHHHHhCcCcccEEEE
Confidence 4456699999998 469999999999999999999998764 8888888766433 32 4566778889999999999
Q ss_pred ECChhhh
Q 022087 247 DNSPQVF 253 (303)
Q Consensus 247 DDs~~~~ 253 (303)
.|++.-.
T Consensus 185 GD~~~Di 191 (197)
T TIGR01548 185 GDTVDDI 191 (197)
T ss_pred eCCHHHH
Confidence 9998644
No 87
>PLN02811 hydrolase
Probab=96.54 E-value=0.0017 Score=58.12 Aligned_cols=97 Identities=13% Similarity=0.118 Sum_probs=71.2
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHH-HHHHhCCCCCceeeeEeec--cceecC---CcccccccccC---C
Q 022087 169 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQ-LLDILDPDGKLISRRVYRE--SCIFSD---GTYTKDLTVLG---V 238 (303)
Q Consensus 169 v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~-il~~LDp~~~~f~~rl~R~--~c~~~~---g~~~KDL~~Lg---r 238 (303)
+.+.||+.++|++|+ ..+.++|-|++.+.++.. +.+..... .+|+..++.+ ++...+ ..|.+-+..+| .
T Consensus 77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~-~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~ 155 (220)
T PLN02811 77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELF-SLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPV 155 (220)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHH-hhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCC
Confidence 457899999999998 579999999998876554 33322222 3688888877 554333 25666677775 8
Q ss_pred CCCcEEEEECChhhhccCCCceeeeccc
Q 022087 239 DLAKVAIIDNSPQVFRLQVNNGIPIESW 266 (303)
Q Consensus 239 dl~~vIIIDDs~~~~~~~~~N~I~I~~f 266 (303)
+++++|+|+|++.-......+|++.--.
T Consensus 156 ~~~~~v~IgDs~~di~aA~~aG~~~i~v 183 (220)
T PLN02811 156 DPGKVLVFEDAPSGVEAAKNAGMSVVMV 183 (220)
T ss_pred CccceEEEeccHhhHHHHHHCCCeEEEE
Confidence 8999999999998887777777766544
No 88
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=96.50 E-value=0.0019 Score=60.36 Aligned_cols=92 Identities=15% Similarity=0.137 Sum_probs=55.3
Q ss_pred CCceEEEEecCcccccccccc----cCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHH
Q 022087 128 RKSVTLVLDLDETLVHSTLEY----CDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQL 202 (303)
Q Consensus 128 ~~k~tLVLDLDeTLvhs~~~~----~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~i 202 (303)
.+++.+|||+|||+++.+.-. ..+..+.-.. ++.-........-||+.+||+++. +...+++.|.....+.+..
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~-w~~wv~~~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T 151 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPET-WDKWVQAAQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAAT 151 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHH-HHHHHHcCCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHH
Confidence 457899999999999876321 1111110000 000000112456799999999997 6789999999887666644
Q ss_pred H---HHhCCCCCceeeeEeec
Q 022087 203 L---DILDPDGKLISRRVYRE 220 (303)
Q Consensus 203 l---~~LDp~~~~f~~rl~R~ 220 (303)
+ +.++-....+++.++|+
T Consensus 152 ~~~Lkk~Gi~~~~~d~lllr~ 172 (266)
T TIGR01533 152 LKNLKRFGFPQADEEHLLLKK 172 (266)
T ss_pred HHHHHHcCcCCCCcceEEeCC
Confidence 4 44444332345667775
No 89
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=96.48 E-value=0.002 Score=58.12 Aligned_cols=94 Identities=13% Similarity=0.234 Sum_probs=68.5
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecC---C---------ccccc-cc
Q 022087 169 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---G---------TYTKD-LT 234 (303)
Q Consensus 169 v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~---g---------~~~KD-L~ 234 (303)
..++||+.+.++.+. ..+.++|.|+|...++++|.+.+..+. .+..++-.++-.+.. | .-++. ++
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~-~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~ 154 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDY-VVANELEIDDGKLTGRVVGPICDGEGKAKALRELAA 154 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCch-heeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHH
Confidence 789999999999999 569999999999999999999999886 567777655411111 1 11111 23
Q ss_pred ccCCCCCcEEEEECChhhhcc--CCCceeee
Q 022087 235 VLGVDLAKVAIIDNSPQVFRL--QVNNGIPI 263 (303)
Q Consensus 235 ~Lgrdl~~vIIIDDs~~~~~~--~~~N~I~I 263 (303)
.+|.++++++-+=|+..-..+ .-++++.+
T Consensus 155 ~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~ 185 (212)
T COG0560 155 ELGIPLEETVAYGDSANDLPMLEAAGLPIAV 185 (212)
T ss_pred HcCCCHHHeEEEcCchhhHHHHHhCCCCeEe
Confidence 458889999999998876654 33444444
No 90
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=96.33 E-value=0.00084 Score=61.15 Aligned_cols=98 Identities=17% Similarity=0.142 Sum_probs=74.1
Q ss_pred EEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhC-CCCCceeeeEe--eccceecC---CcccccccccCCCC
Q 022087 168 YVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILD-PDGKLISRRVY--RESCIFSD---GTYTKDLTVLGVDL 240 (303)
Q Consensus 168 ~v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LD-p~~~~f~~rl~--R~~c~~~~---g~~~KDL~~Lgrdl 240 (303)
.++.-||+.++++.|. ..-.+.++|++.+..++..++.+. +- ..|++... -..+...+ ..|.+-.+++|.++
T Consensus 90 ~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~-~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~~~ 168 (222)
T KOG2914|consen 90 NSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIF-KNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGVPP 168 (222)
T ss_pred ccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHH-HhcCCCeecCCccccCCCCCchHHHHHHHhcCCCC
Confidence 3788899999999998 568999999999999998888775 43 35777666 23332221 25788889999888
Q ss_pred -CcEEEEECChhhhccCCCceeeeccc
Q 022087 241 -AKVAIIDNSPQVFRLQVNNGIPIESW 266 (303)
Q Consensus 241 -~~vIIIDDs~~~~~~~~~N~I~I~~f 266 (303)
+++++++|++........-|.++...
T Consensus 169 ~~k~lVfeds~~Gv~aa~aagm~vi~v 195 (222)
T KOG2914|consen 169 PSKCLVFEDSPVGVQAAKAAGMQVVGV 195 (222)
T ss_pred ccceEEECCCHHHHHHHHhcCCeEEEe
Confidence 99999999998876655555555443
No 91
>PTZ00445 p36-lilke protein; Provisional
Probab=96.33 E-value=0.0042 Score=56.22 Aligned_cols=133 Identities=16% Similarity=0.153 Sum_probs=80.6
Q ss_pred CCCCceEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHH------
Q 022087 126 QGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIY------ 198 (303)
Q Consensus 126 ~~~~k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~~~Y------ 198 (303)
+..+-+.+++|||.|||-.-..-....+ .....+.-..||.+..++++|. ..+.|+|-|-+.+.-
T Consensus 39 ~~~GIk~Va~D~DnTlI~~HsgG~~~~~--------~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~ 110 (219)
T PTZ00445 39 NECGIKVIASDFDLTMITKHSGGYIDPD--------NDDIRVLTSVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENR 110 (219)
T ss_pred HHcCCeEEEecchhhhhhhhcccccCCC--------cchhhhhccCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCC
Confidence 3457789999999999863111000000 0011233567999999999998 579999999998743
Q ss_pred ---------HHHHHHHhCCCCCceeee------Eeeccceec--------CCc--c--cccccccCCCCCcEEEEECChh
Q 022087 199 ---------AAQLLDILDPDGKLISRR------VYRESCIFS--------DGT--Y--TKDLTVLGVDLAKVAIIDNSPQ 251 (303)
Q Consensus 199 ---------A~~il~~LDp~~~~f~~r------l~R~~c~~~--------~g~--~--~KDL~~Lgrdl~~vIIIDDs~~ 251 (303)
+...|+.=.-+-+ +... ++.+.-.+. .+. | .+=+++.|.+++.+++|||++.
T Consensus 111 ~~~Isg~~li~~~lk~s~~~~~-i~~~~~yyp~~w~~p~~y~~~gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~ 189 (219)
T PTZ00445 111 PRYISGDRMVEAALKKSKCDFK-IKKVYAYYPKFWQEPSDYRPLGLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMN 189 (219)
T ss_pred cceechHHHHHHHHHhcCccce-eeeeeeeCCcccCChhhhhhhcccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHH
Confidence 4445543322211 1111 112211111 012 3 4455677999999999999999
Q ss_pred hhccCCCceeeecccc
Q 022087 252 VFRLQVNNGIPIESWF 267 (303)
Q Consensus 252 ~~~~~~~N~I~I~~f~ 267 (303)
.+.....-|+..--+.
T Consensus 190 NVeaA~~lGi~ai~f~ 205 (219)
T PTZ00445 190 NCKNALKEGYIALHVT 205 (219)
T ss_pred HHHHHHHCCCEEEEcC
Confidence 9877666676665554
No 92
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=96.04 E-value=0.016 Score=51.86 Aligned_cols=96 Identities=13% Similarity=0.091 Sum_probs=65.5
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEe--eccceecC------------C-ccccc
Q 022087 169 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVY--RESCIFSD------------G-TYTKD 232 (303)
Q Consensus 169 v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~--R~~c~~~~------------g-~~~KD 232 (303)
+.++||+.+||+++. +.+.++|.|++...|++++++.+-+...++...+. .+.....+ | ...+-
T Consensus 73 ~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~~ 152 (219)
T PRK09552 73 AEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGLIPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPSL 152 (219)
T ss_pred CCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHhCCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHHH
Confidence 688999999999998 56999999999999999999987222223432221 11111000 0 12234
Q ss_pred ccccCCCCCcEEEEECChhhhccCCCceeeec
Q 022087 233 LTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIE 264 (303)
Q Consensus 233 L~~Lgrdl~~vIIIDDs~~~~~~~~~N~I~I~ 264 (303)
++.++....++|.|.|+..-.......|+.+.
T Consensus 153 l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a 184 (219)
T PRK09552 153 IRKLSDTNDFHIVIGDSITDLEAAKQADKVFA 184 (219)
T ss_pred HHHhccCCCCEEEEeCCHHHHHHHHHCCccee
Confidence 45567778899999999988776666677443
No 93
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=95.94 E-value=0.0023 Score=54.67 Aligned_cols=77 Identities=13% Similarity=0.112 Sum_probs=63.3
Q ss_pred EeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecCC---cccccccccCCCCCcEEE
Q 022087 169 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVAI 245 (303)
Q Consensus 169 v~~RP~l~eFL~~l~~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~g---~~~KDL~~Lgrdl~~vII 245 (303)
+..+||+.++|+. ++|.|++.+.++..+++.+.-.. +|+..+..+.....+. .|.+-++++|.+++++++
T Consensus 89 ~~~~~g~~~~L~~------~~i~Tn~~~~~~~~~l~~~~l~~-~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~ 161 (175)
T TIGR01493 89 LPPWPDSAAALAR------VAILSNASHWAFDQFAQQAGLPW-YFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRVLM 161 (175)
T ss_pred CCCCCchHHHHHH------HhhhhCCCHHHHHHHHHHCCCHH-HHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEe
Confidence 5689999999994 78999999999999999997654 7888777776544432 567888899999999999
Q ss_pred EECChhh
Q 022087 246 IDNSPQV 252 (303)
Q Consensus 246 IDDs~~~ 252 (303)
|+|++..
T Consensus 162 vgD~~~D 168 (175)
T TIGR01493 162 VAAHQWD 168 (175)
T ss_pred EecChhh
Confidence 9999753
No 94
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=95.66 E-value=0.021 Score=50.45 Aligned_cols=126 Identities=19% Similarity=0.268 Sum_probs=83.5
Q ss_pred ceEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCc------------H
Q 022087 130 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQ------------S 196 (303)
Q Consensus 130 k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~------------~ 196 (303)
.+.|+||.||||.--......+ . --..+.||+.+-|..+. ..|.+||+|.-+ .
T Consensus 5 ~k~lflDRDGtin~d~~~yv~~-----------~---~~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~ 70 (181)
T COG0241 5 QKALFLDRDGTINIDKGDYVDS-----------L---DDFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFD 70 (181)
T ss_pred CcEEEEcCCCceecCCCcccCc-----------H---HHhccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHH
Confidence 5799999999997432110000 0 01567899999999997 579999999833 2
Q ss_pred HHHHHHHHHhCCCCCceeeeEeecc-----ceecC---CcccccccccCCCCCcEEEEECChhhhccCCCc---eeeecc
Q 022087 197 IYAAQLLDILDPDGKLISRRVYRES-----CIFSD---GTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNN---GIPIES 265 (303)
Q Consensus 197 ~YA~~il~~LDp~~~~f~~rl~R~~-----c~~~~---g~~~KDL~~Lgrdl~~vIIIDDs~~~~~~~~~N---~I~I~~ 265 (303)
.+-+.+++.|--.|.-|+.++++.| |.+.+ |.+..-++..+.|+++.++|=|+..-..+.... ++.+..
T Consensus 71 ~~~~~m~~~l~~~gv~id~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~ 150 (181)
T COG0241 71 KLHNKMLKILASQGVKIDGILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLT 150 (181)
T ss_pred HHHHHHHHHHHHcCCccceEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEc
Confidence 3444566666666666899999543 55443 345555667789999999999997654332222 555555
Q ss_pred ccCC
Q 022087 266 WFDD 269 (303)
Q Consensus 266 f~~d 269 (303)
|.+.
T Consensus 151 ~~~~ 154 (181)
T COG0241 151 GIGV 154 (181)
T ss_pred Cccc
Confidence 5543
No 95
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=95.63 E-value=0.021 Score=45.38 Aligned_cols=50 Identities=24% Similarity=0.267 Sum_probs=36.6
Q ss_pred EEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHh
Q 022087 133 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDIL 206 (303)
Q Consensus 133 LVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~~-~yEivIfTas~~~YA~~il~~L 206 (303)
+++|+||||.+.. ..=||+.+||+++.+ ...+++.|.++..-...+.+.|
T Consensus 1 ~l~D~dGvl~~g~------------------------~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L 51 (101)
T PF13344_consen 1 FLFDLDGVLYNGN------------------------EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKL 51 (101)
T ss_dssp EEEESTTTSEETT------------------------EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHH
T ss_pred CEEeCccEeEeCC------------------------CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHH
Confidence 5799999998742 235999999999994 6999999999855545555444
No 96
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=95.62 E-value=0.038 Score=50.57 Aligned_cols=58 Identities=31% Similarity=0.340 Sum_probs=50.5
Q ss_pred ceEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCC
Q 022087 130 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDP 208 (303)
Q Consensus 130 k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp 208 (303)
.+.+++||||||+.+.. ...|...+.|+++. +...++|-|......+.++++.|..
T Consensus 3 ~kli~~DlDGTLl~~~~-----------------------~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~ 59 (264)
T COG0561 3 IKLLAFDLDGTLLDSNK-----------------------TISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGL 59 (264)
T ss_pred eeEEEEcCCCCccCCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCC
Confidence 46899999999998742 16888999999885 8899999999999999999999988
Q ss_pred CC
Q 022087 209 DG 210 (303)
Q Consensus 209 ~~ 210 (303)
.+
T Consensus 60 ~~ 61 (264)
T COG0561 60 DG 61 (264)
T ss_pred Cc
Confidence 75
No 97
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=95.51 E-value=0.028 Score=49.02 Aligned_cols=115 Identities=12% Similarity=0.127 Sum_probs=75.3
Q ss_pred ceEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHh-hcceEEEEEcCCcHHHHHHHHHHhCC
Q 022087 130 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERV-AEMFEVVIFTASQSIYAAQLLDILDP 208 (303)
Q Consensus 130 k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l-~~~yEivIfTas~~~YA~~il~~LDp 208 (303)
-+.+|||.||||-.-+..... . .+....+..|-+.- ++.| .+.+.++|.|+....+++.+++.+.-
T Consensus 7 i~~~v~d~dGv~tdg~~~~~~----------~-g~~~~~~~~~D~~~--~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi 73 (169)
T TIGR02726 7 IKLVILDVDGVMTDGRIVIND----------E-GIESRNFDIKDGMG--VIVLQLCGIDVAIITSKKSGAVRHRAEELKI 73 (169)
T ss_pred CeEEEEeCceeeECCeEEEcC----------C-CcEEEEEecchHHH--HHHHHHCCCEEEEEECCCcHHHHHHHHHCCC
Confidence 468999999999776421111 1 11123345555554 2333 26799999999999999999999977
Q ss_pred CCCceeeeEeeccceecC-CcccccccccCCCCCcEEEEECChhhhccCCCceeeecc
Q 022087 209 DGKLISRRVYRESCIFSD-GTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIES 265 (303)
Q Consensus 209 ~~~~f~~rl~R~~c~~~~-g~~~KDL~~Lgrdl~~vIIIDDs~~~~~~~~~N~I~I~~ 265 (303)
.. +|... ..+ ..+..-+..+|.++++++.|.|++.-.......|+.+..
T Consensus 74 ~~-~f~~~-------kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am 123 (169)
T TIGR02726 74 KR-FHEGI-------KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAV 123 (169)
T ss_pred cE-EEecC-------CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEEC
Confidence 63 55432 111 133444567788999999999999776555445555543
No 98
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=95.45 E-value=0.043 Score=50.79 Aligned_cols=57 Identities=21% Similarity=0.171 Sum_probs=46.7
Q ss_pred ceEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCC
Q 022087 130 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDP 208 (303)
Q Consensus 130 k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~~-~yEivIfTas~~~YA~~il~~LDp 208 (303)
.+.+++||||||+.+.. ...|...+.|+++.+ .+.++|-|.-....+..+++.++.
T Consensus 4 ~kli~~DlDGTLl~~~~-----------------------~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l 60 (273)
T PRK00192 4 KLLVFTDLDGTLLDHHT-----------------------YSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGL 60 (273)
T ss_pred ceEEEEcCcccCcCCCC-----------------------cCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCC
Confidence 45899999999997521 135778899999984 699999999999999999999875
Q ss_pred C
Q 022087 209 D 209 (303)
Q Consensus 209 ~ 209 (303)
.
T Consensus 61 ~ 61 (273)
T PRK00192 61 E 61 (273)
T ss_pred C
Confidence 4
No 99
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=95.40 E-value=0.039 Score=48.63 Aligned_cols=54 Identities=28% Similarity=0.284 Sum_probs=44.8
Q ss_pred EEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCC
Q 022087 133 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 209 (303)
Q Consensus 133 LVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~ 209 (303)
|++||||||+++... .-|...+.|+++. +...+++.|.-....+..++..+.-.
T Consensus 1 i~~DlDGTLl~~~~~-----------------------i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~ 55 (254)
T PF08282_consen 1 IFSDLDGTLLNSDGK-----------------------ISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGID 55 (254)
T ss_dssp EEEECCTTTCSTTSS-----------------------SCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHC
T ss_pred cEEEECCceecCCCe-----------------------eCHHHHHHHHhhcccceEEEEEccCcccccccccccccch
Confidence 689999999986321 4577888999888 78999999999999999999977643
No 100
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=95.36 E-value=0.035 Score=49.50 Aligned_cols=94 Identities=9% Similarity=0.056 Sum_probs=62.2
Q ss_pred EEeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeec--cceecCC-------------cccc
Q 022087 168 YVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRE--SCIFSDG-------------TYTK 231 (303)
Q Consensus 168 ~v~~RP~l~eFL~~l~~-~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~--~c~~~~g-------------~~~K 231 (303)
.+.+|||+.+||+.+.+ .+.++|.|++...|++++++.+.+...++..++.-+ ....... ...+
T Consensus 68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~ 147 (214)
T TIGR03333 68 TAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPS 147 (214)
T ss_pred cCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHH
Confidence 37899999999999985 699999999999999999999855433444333211 1000000 0112
Q ss_pred cccccCCCCCcEEEEECChhhhccCCCcee
Q 022087 232 DLTVLGVDLAKVAIIDNSPQVFRLQVNNGI 261 (303)
Q Consensus 232 DL~~Lgrdl~~vIIIDDs~~~~~~~~~N~I 261 (303)
-++.++...++++.|-|+..-+......++
T Consensus 148 ~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~ 177 (214)
T TIGR03333 148 LIRKLSEPNDYHIVIGDSVTDVEAAKQSDL 177 (214)
T ss_pred HHHHHhhcCCcEEEEeCCHHHHHHHHhCCe
Confidence 233444566789999999987765444444
No 101
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=95.27 E-value=0.022 Score=49.01 Aligned_cols=107 Identities=19% Similarity=0.227 Sum_probs=56.0
Q ss_pred eEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCc---H----------
Q 022087 131 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQ---S---------- 196 (303)
Q Consensus 131 ~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~---~---------- 196 (303)
+.+.||+||||+.......-.. ...=+..+-|++-+-|+++. +.|.|||+|.-. +
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~-----------~~~D~~~~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~ 69 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPK-----------DPDDWKFFPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENF 69 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-S-----------STCGGEEC-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHH
T ss_pred CEEEEeCCCCccCCCCCCcCcC-----------CHHHhhhcchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHH
Confidence 3688999999999854221100 00112456688999999998 589999999751 1
Q ss_pred -HHHHHHHHHhCCCCCceeeeEe---eccceec-CCcc---cccccc-cCCCCCcEEEEECChhh
Q 022087 197 -IYAAQLLDILDPDGKLISRRVY---RESCIFS-DGTY---TKDLTV-LGVDLAKVAIIDNSPQV 252 (303)
Q Consensus 197 -~YA~~il~~LDp~~~~f~~rl~---R~~c~~~-~g~~---~KDL~~-Lgrdl~~vIIIDDs~~~ 252 (303)
...+.+++.|+- .+ ..++ .+.|..- .|.+ .+++.. +..|+++.++|=|++.-
T Consensus 70 ~~ki~~il~~l~i---p~-~~~~a~~~d~~RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaagr 130 (159)
T PF08645_consen 70 HEKIENILKELGI---PI-QVYAAPHKDPCRKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAGR 130 (159)
T ss_dssp HHHHHHHHHHCTS----E-EEEECGCSSTTSTTSSHHHHHHCCCTSTT--S-CCC-EEEESSCHC
T ss_pred HHHHHHHHHHcCC---ce-EEEecCCCCCCCCCchhHHHHHHHhccccccccccceEEEeccCCC
Confidence 233445555532 22 2222 2233221 1332 333332 23588999999997544
No 102
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=95.18 E-value=0.047 Score=51.38 Aligned_cols=105 Identities=18% Similarity=0.278 Sum_probs=69.1
Q ss_pred EEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCC---CCCceeeeEeeccceecCC-------cccc-----
Q 022087 168 YVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDP---DGKLISRRVYRESCIFSDG-------TYTK----- 231 (303)
Q Consensus 168 ~v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp---~~~~f~~rl~R~~c~~~~g-------~~~K----- 231 (303)
.+.+|||+.+|+++|. ....++|+|+|...+++.+++.++- ....++.++--+......| .+-|
T Consensus 119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~ 198 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVA 198 (277)
T ss_pred CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHH
Confidence 3788999999999997 5699999999999999999998653 2234566655322111112 1122
Q ss_pred --cccccC--CCCCcEEEEECChhhhcc-----CCCceeeeccccCCCCch
Q 022087 232 --DLTVLG--VDLAKVAIIDNSPQVFRL-----QVNNGIPIESWFDDPSDC 273 (303)
Q Consensus 232 --DL~~Lg--rdl~~vIIIDDs~~~~~~-----~~~N~I~I~~f~~d~~D~ 273 (303)
..+.++ .+.++||+|-|+..-..+ +.+|.|.| .|..+.-+.
T Consensus 199 ~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~i-gfln~~~e~ 248 (277)
T TIGR01544 199 LRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKI-GYLNDRVDE 248 (277)
T ss_pred HHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEE-EecccCHHH
Confidence 122345 688899999999976543 33455555 344444443
No 103
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.16 E-value=0.031 Score=56.03 Aligned_cols=133 Identities=17% Similarity=0.228 Sum_probs=75.3
Q ss_pred CCCceEEEEecCcccccccccccCCCCceeEEEecc-eeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHH
Q 022087 127 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNM-KEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLD 204 (303)
Q Consensus 127 ~~~k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~-~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~ 204 (303)
+..+++||||||+||.-..... |=.-.+.... ....-| --+++|...+. +.+=++|.|-....-|..+..
T Consensus 219 g~~kK~LVLDLDNTLWGGVIGe----dGv~GI~Ls~~~~G~~f----k~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~ 290 (574)
T COG3882 219 GKSKKALVLDLDNTLWGGVIGE----DGVDGIRLSNSAEGEAF----KTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFR 290 (574)
T ss_pred CcccceEEEecCCccccccccc----ccccceeecCCCCchhH----HHHHHHHHHHHhccEEEEEecCCchhhHHHHHh
Confidence 4567899999999996553211 1110111100 000000 12456666666 678899999999988888776
Q ss_pred HhCCCCCcee-eeEeeccceecC--CcccccccccCCCCCcEEEEECChhhhccCCCce-eeeccccCC
Q 022087 205 ILDPDGKLIS-RRVYRESCIFSD--GTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNG-IPIESWFDD 269 (303)
Q Consensus 205 ~LDp~~~~f~-~rl~R~~c~~~~--g~~~KDL~~Lgrdl~~vIIIDDs~~~~~~~~~N~-I~I~~f~~d 269 (303)
+- |+- ++. --+..-.|.+.. .+..|-.++|+-.+.-.++|||+|.....-..++ +.|..|-.|
T Consensus 291 kh-p~M-iLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmvFiDD~p~ErE~vk~~~~v~Vi~~~~D 357 (574)
T COG3882 291 KH-PDM-ILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMVFIDDNPAERELVKRELPVSVIEFPED 357 (574)
T ss_pred hC-CCe-EeeHhhhhhheecCCcchhhHHHHHHHhCCCccceEEecCCHHHHHHHHhcCceeeccCCCC
Confidence 43 221 111 011111233322 2456777889999999999999998765433332 555555433
No 104
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=95.07 E-value=0.028 Score=49.04 Aligned_cols=118 Identities=19% Similarity=0.255 Sum_probs=83.0
Q ss_pred CCCccCCCCceEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHH
Q 022087 121 SPKETQGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYA 199 (303)
Q Consensus 121 ~p~~~~~~~k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA 199 (303)
.|..-..++-+.+|+|||+|||-=. . -..-|-+.+-+..+. +.-.++|.|...+.-+
T Consensus 19 ~~~~L~~~Gikgvi~DlDNTLv~wd--~--------------------~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV 76 (175)
T COG2179 19 TPDILKAHGIKGVILDLDNTLVPWD--N--------------------PDATPELRAWLAELKEAGIKVVVVSNNKESRV 76 (175)
T ss_pred CHHHHHHcCCcEEEEeccCceeccc--C--------------------CCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHH
Confidence 3444567788899999999998531 1 123588899999999 4599999999999999
Q ss_pred HHHHHHhCCCCCceeeeEeeccceecCCcccccccccCCCCCcEEEEECChh--hhccCCCc--eeeecccc
Q 022087 200 AQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQ--VFRLQVNN--GIPIESWF 267 (303)
Q Consensus 200 ~~il~~LDp~~~~f~~rl~R~~c~~~~g~~~KDL~~Lgrdl~~vIIIDDs~~--~~~~~~~N--~I~I~~f~ 267 (303)
..++..||-.. + ++--.. ....+.|-|..++-+.++|++|-|.-. +...+... .|.|+|-.
T Consensus 77 ~~~~~~l~v~f--i-~~A~KP----~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~Pl~ 141 (175)
T COG2179 77 ARAAEKLGVPF--I-YRAKKP----FGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILVEPLV 141 (175)
T ss_pred HhhhhhcCCce--e-ecccCc----cHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEEEEEEec
Confidence 99999998653 1 111000 112456778888999999999999875 33333322 56666654
No 105
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=95.06 E-value=0.075 Score=49.08 Aligned_cols=59 Identities=19% Similarity=0.252 Sum_probs=45.9
Q ss_pred CCceEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHh
Q 022087 128 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDIL 206 (303)
Q Consensus 128 ~~k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~L 206 (303)
+.++.+++||||||+++... .-|-..+-|+++. +...+++.|.-....+.++++.+
T Consensus 5 ~~~~lI~~DlDGTLL~~~~~-----------------------i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l 61 (271)
T PRK03669 5 QDPLLIFTDLDGTLLDSHTY-----------------------DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTL 61 (271)
T ss_pred CCCeEEEEeCccCCcCCCCc-----------------------CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHh
Confidence 34678999999999986211 2244667788887 56999999999999999999998
Q ss_pred CCC
Q 022087 207 DPD 209 (303)
Q Consensus 207 Dp~ 209 (303)
+..
T Consensus 62 ~~~ 64 (271)
T PRK03669 62 GLQ 64 (271)
T ss_pred CCC
Confidence 764
No 106
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=94.92 E-value=0.059 Score=47.10 Aligned_cols=97 Identities=20% Similarity=0.283 Sum_probs=64.8
Q ss_pred cCCCCceEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhcce---EEEEEcCCc------
Q 022087 125 TQGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMF---EVVIFTASQ------ 195 (303)
Q Consensus 125 ~~~~~k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~~~y---EivIfTas~------ 195 (303)
-+..+-+.||||+|+||+.-.. -..-|.+.+.++++.+.| .|+|.|.+.
T Consensus 36 Lk~~Gik~li~DkDNTL~~~~~----------------------~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~ 93 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTPPYE----------------------DEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDP 93 (168)
T ss_pred hhhcCceEEEEcCCCCCCCCCc----------------------CcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCc
Confidence 3566778999999999975421 235688889999999765 399999983
Q ss_pred -HHHHHHHHHHhCCCCCceeeeEeeccceecCCcccccccccC-----CCCCcEEEEECChh
Q 022087 196 -SIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLG-----VDLAKVAIIDNSPQ 251 (303)
Q Consensus 196 -~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~g~~~KDL~~Lg-----rdl~~vIIIDDs~~ 251 (303)
..-|+.+-+.|.-. .+.|+--.. +.+.+-++.++ ..++++++|-|...
T Consensus 94 ~~~~a~~~~~~lgIp--vl~h~~kKP------~~~~~i~~~~~~~~~~~~p~eiavIGDrl~ 147 (168)
T PF09419_consen 94 DGERAEALEKALGIP--VLRHRAKKP------GCFREILKYFKCQKVVTSPSEIAVIGDRLF 147 (168)
T ss_pred cHHHHHHHHHhhCCc--EEEeCCCCC------ccHHHHHHHHhhccCCCCchhEEEEcchHH
Confidence 67788888888643 233332222 22222222232 35889999999874
No 107
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=94.91 E-value=0.072 Score=47.23 Aligned_cols=57 Identities=16% Similarity=0.229 Sum_probs=46.6
Q ss_pred eEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCC
Q 022087 131 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 209 (303)
Q Consensus 131 ~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~ 209 (303)
+.+++||||||+.... ...|...+-|+++. +...+++.|.-....+.++++.|+..
T Consensus 2 k~v~~DlDGTLl~~~~-----------------------~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~ 58 (215)
T TIGR01487 2 KLVAIDIDGTLTEPNR-----------------------MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTS 58 (215)
T ss_pred cEEEEecCCCcCCCCc-----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCC
Confidence 4789999999996421 24677888899998 56999999999999999999999876
Q ss_pred C
Q 022087 210 G 210 (303)
Q Consensus 210 ~ 210 (303)
+
T Consensus 59 ~ 59 (215)
T TIGR01487 59 G 59 (215)
T ss_pred C
Confidence 4
No 108
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=94.75 E-value=0.086 Score=48.21 Aligned_cols=57 Identities=19% Similarity=0.211 Sum_probs=45.4
Q ss_pred ceEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCC
Q 022087 130 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDP 208 (303)
Q Consensus 130 k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp 208 (303)
.+.+++||||||+++.. ..-|...+-|+++. +...++|-|.-....+.++++.+..
T Consensus 3 ~kli~~DlDGTLl~~~~-----------------------~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~ 59 (270)
T PRK10513 3 IKLIAIDMDGTLLLPDH-----------------------TISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHM 59 (270)
T ss_pred eEEEEEecCCcCcCCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCC
Confidence 36889999999997631 13456678888888 5689999999999999999998875
Q ss_pred C
Q 022087 209 D 209 (303)
Q Consensus 209 ~ 209 (303)
.
T Consensus 60 ~ 60 (270)
T PRK10513 60 E 60 (270)
T ss_pred C
Confidence 4
No 109
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=94.66 E-value=0.082 Score=47.87 Aligned_cols=53 Identities=19% Similarity=0.222 Sum_probs=42.6
Q ss_pred EEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCC
Q 022087 133 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 209 (303)
Q Consensus 133 LVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~ 209 (303)
+++||||||++... .-|...++|+++. +...+++.|.-+...+..+++.+...
T Consensus 2 i~~DlDGTLl~~~~------------------------~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 2 IFTDLDGTLLPPGY------------------------EPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred EEEeCCCCCcCCCC------------------------CchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 68899999998421 1356889999998 56999999999888888888888753
No 110
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=94.60 E-value=0.11 Score=47.28 Aligned_cols=57 Identities=25% Similarity=0.305 Sum_probs=39.3
Q ss_pred ceEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCC
Q 022087 130 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDP 208 (303)
Q Consensus 130 k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp 208 (303)
.+.+++||||||+.+... ..|...+-|+++. +...++|-|.-....+..+++.++.
T Consensus 3 ~kli~~DlDGTLl~~~~~-----------------------i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~ 59 (272)
T PRK10530 3 YRVIALDLDGTLLTPKKT-----------------------ILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALAL 59 (272)
T ss_pred ccEEEEeCCCceECCCCc-----------------------cCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCC
Confidence 358899999999976321 2344556666666 4577777777777777777777765
Q ss_pred C
Q 022087 209 D 209 (303)
Q Consensus 209 ~ 209 (303)
.
T Consensus 60 ~ 60 (272)
T PRK10530 60 D 60 (272)
T ss_pred C
Confidence 4
No 111
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=94.45 E-value=0.039 Score=51.13 Aligned_cols=100 Identities=16% Similarity=0.175 Sum_probs=66.3
Q ss_pred EEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEee-----------c----cceecCCc---
Q 022087 168 YVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYR-----------E----SCIFSDGT--- 228 (303)
Q Consensus 168 ~v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R-----------~----~c~~~~g~--- 228 (303)
....-|.+-++++.+. +..-++..|+....+...-++.|---|--|+...++ . .-.+.+|.
T Consensus 79 ~~lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft 158 (252)
T PF11019_consen 79 MELIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFT 158 (252)
T ss_pred eEEcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEe
Confidence 3567789999999999 679999999999999998888774333223333211 1 11122331
Q ss_pred --------ccccccccCCCCCcEEEEECChhhhc----cCCCceeeecccc
Q 022087 229 --------YTKDLTVLGVDLAKVAIIDNSPQVFR----LQVNNGIPIESWF 267 (303)
Q Consensus 229 --------~~KDL~~Lgrdl~~vIIIDDs~~~~~----~~~~N~I~I~~f~ 267 (303)
...=|..+|..++++|+|||+..... .-...+|..-.++
T Consensus 159 ~~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~ 209 (252)
T PF11019_consen 159 GGQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFH 209 (252)
T ss_pred CCCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEE
Confidence 12224567999999999999998652 1233677666664
No 112
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=94.43 E-value=0.13 Score=45.77 Aligned_cols=57 Identities=12% Similarity=0.222 Sum_probs=45.1
Q ss_pred eEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCC
Q 022087 131 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 209 (303)
Q Consensus 131 ~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~ 209 (303)
+.+++||||||+.+.. ...|...+-|+++. +...++|-|.-....+.++++.+...
T Consensus 4 kli~~DlDGTLl~~~~-----------------------~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 60 (230)
T PRK01158 4 KAIAIDIDGTITDKDR-----------------------RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTS 60 (230)
T ss_pred eEEEEecCCCcCCCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCC
Confidence 5889999999996521 24567778888888 56899999999888888888888765
Q ss_pred C
Q 022087 210 G 210 (303)
Q Consensus 210 ~ 210 (303)
+
T Consensus 61 ~ 61 (230)
T PRK01158 61 G 61 (230)
T ss_pred C
Confidence 4
No 113
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=94.37 E-value=0.027 Score=51.14 Aligned_cols=89 Identities=10% Similarity=0.106 Sum_probs=63.6
Q ss_pred EeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecCC---cccccccccCCCCCcEEE
Q 022087 169 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVAI 245 (303)
Q Consensus 169 v~~RP~l~eFL~~l~~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~g---~~~KDL~~Lgrdl~~vII 245 (303)
+..-||+.++|++|.+.|.++|.|++... ++..+-. .+|+..+..+.....+. .|.+-++.+|.+++++++
T Consensus 112 ~~~~~gv~~~L~~L~~~~~l~i~Tn~~~~-----~~~~gl~-~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~ 185 (238)
T PRK10748 112 IDVPQATHDTLKQLAKKWPLVAITNGNAQ-----PELFGLG-DYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEILH 185 (238)
T ss_pred CCCCccHHHHHHHHHcCCCEEEEECCCch-----HHHCCcH-HhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHEEE
Confidence 44559999999999988999999998765 2444443 47887776554433322 466667888999999999
Q ss_pred EECCh-hhhccCCCceeee
Q 022087 246 IDNSP-QVFRLQVNNGIPI 263 (303)
Q Consensus 246 IDDs~-~~~~~~~~N~I~I 263 (303)
|.|++ .-......+|+..
T Consensus 186 VGD~~~~Di~~A~~aG~~~ 204 (238)
T PRK10748 186 VGDDLTTDVAGAIRCGMQA 204 (238)
T ss_pred EcCCcHHHHHHHHHCCCeE
Confidence 99984 5555555566654
No 114
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=94.29 E-value=0.12 Score=47.12 Aligned_cols=54 Identities=26% Similarity=0.333 Sum_probs=42.7
Q ss_pred EEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCC
Q 022087 133 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 209 (303)
Q Consensus 133 LVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~ 209 (303)
+++||||||++... ...|...+.|+++. +...++|-|......+..+++.+...
T Consensus 2 i~~DlDGTLl~~~~-----------------------~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~ 56 (256)
T TIGR00099 2 IFIDLDGTLLNDDH-----------------------TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLD 56 (256)
T ss_pred EEEeCCCCCCCCCC-----------------------ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 68999999997521 13566778888887 56899999999988888888888765
No 115
>PRK10976 putative hydrolase; Provisional
Probab=94.10 E-value=0.15 Score=46.61 Aligned_cols=56 Identities=23% Similarity=0.246 Sum_probs=37.5
Q ss_pred eEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCC
Q 022087 131 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 209 (303)
Q Consensus 131 ~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~ 209 (303)
+.+++||||||+++... .-|...+-|+++. +...++|-|.-....+.++++.++..
T Consensus 3 kli~~DlDGTLl~~~~~-----------------------is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 59 (266)
T PRK10976 3 QVVASDLDGTLLSPDHT-----------------------LSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIK 59 (266)
T ss_pred eEEEEeCCCCCcCCCCc-----------------------CCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCC
Confidence 58899999999976321 2344556666665 45677777777666666666666544
No 116
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=94.05 E-value=0.15 Score=46.95 Aligned_cols=57 Identities=18% Similarity=0.201 Sum_probs=39.5
Q ss_pred eEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCC
Q 022087 131 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 209 (303)
Q Consensus 131 ~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~ 209 (303)
+.+++||||||+.+.. ..-|...+-|+++. +...+++-|.-....+.++++.++..
T Consensus 3 kli~~DlDGTLl~~~~-----------------------~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 59 (272)
T PRK15126 3 RLAAFDMDGTLLMPDH-----------------------HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLD 59 (272)
T ss_pred cEEEEeCCCcCcCCCC-----------------------cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCC
Confidence 5889999999997531 13455566677776 45777777777777777777777654
Q ss_pred C
Q 022087 210 G 210 (303)
Q Consensus 210 ~ 210 (303)
.
T Consensus 60 ~ 60 (272)
T PRK15126 60 A 60 (272)
T ss_pred C
Confidence 3
No 117
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=94.04 E-value=0.13 Score=44.11 Aligned_cols=61 Identities=15% Similarity=0.218 Sum_probs=41.6
Q ss_pred EEEecCccccccccc-ccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHH---HHHHHh
Q 022087 133 LVLDLDETLVHSTLE-YCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAA---QLLDIL 206 (303)
Q Consensus 133 LVLDLDeTLvhs~~~-~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~---~il~~L 206 (303)
+++|+||||+.+... .... ..... ...|++.++++++. +.|.+++.|+.....+. +.+..+
T Consensus 2 VisDIDGTL~~sd~~~~~~~----------~~~~~---~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~ 67 (157)
T smart00775 2 VISDIDGTITKSDVLGHVVP----------IIGKD---WTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQI 67 (157)
T ss_pred EEEecCCCCccccccccccc----------ccccC---cCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHh
Confidence 789999999987411 0000 00001 34799999999998 57899999998877664 566553
No 118
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=94.00 E-value=0.19 Score=42.61 Aligned_cols=84 Identities=17% Similarity=0.271 Sum_probs=56.8
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecCC--------------ccccc-
Q 022087 169 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG--------------TYTKD- 232 (303)
Q Consensus 169 v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~g--------------~~~KD- 232 (303)
+..+||+.++|+++. +.+.++|.|++.+.|++++++.++... +|+.++.-+......| ..++.
T Consensus 72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~-~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~~ 150 (177)
T TIGR01488 72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDD-VFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKEL 150 (177)
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCch-heeeeEEECCCCEEeCccCCcccCCcchHHHHHHHH
Confidence 567999999999997 569999999999999999999987653 5665554321100001 11111
Q ss_pred ccccCCCCCcEEEEECChhhh
Q 022087 233 LTVLGVDLAKVAIIDNSPQVF 253 (303)
Q Consensus 233 L~~Lgrdl~~vIIIDDs~~~~ 253 (303)
+...|.+.++++.|-|+..-.
T Consensus 151 ~~~~~~~~~~~~~iGDs~~D~ 171 (177)
T TIGR01488 151 LEESKITLKKIIAVGDSVNDL 171 (177)
T ss_pred HHHhCCCHHHEEEEeCCHHHH
Confidence 123355667788888876543
No 119
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=93.96 E-value=0.11 Score=46.05 Aligned_cols=54 Identities=22% Similarity=0.234 Sum_probs=42.9
Q ss_pred EEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCC
Q 022087 133 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 209 (303)
Q Consensus 133 LVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~ 209 (303)
+++||||||+++... .-|-..+.|+++. +...+++.|.-....+.++++.+...
T Consensus 2 i~~DlDGTLL~~~~~-----------------------~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 2 VFSDLDGTLLDSHSY-----------------------DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred EEEeCCCCCcCCCCC-----------------------CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 689999999976310 1223678899988 56899999999999999999998744
No 120
>PRK10444 UMP phosphatase; Provisional
Probab=93.65 E-value=0.11 Score=47.95 Aligned_cols=53 Identities=23% Similarity=0.366 Sum_probs=42.0
Q ss_pred eEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhC
Q 022087 131 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILD 207 (303)
Q Consensus 131 ~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LD 207 (303)
+.+++|+||||++.. ..=||+.++++++. +...+++.|.....-+..+.+.|.
T Consensus 2 ~~v~~DlDGtL~~~~------------------------~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~ 55 (248)
T PRK10444 2 KNVICDIDGVLMHDN------------------------VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFA 55 (248)
T ss_pred cEEEEeCCCceEeCC------------------------eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHH
Confidence 378999999998862 13589999999998 578999999988776666666664
No 121
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=93.59 E-value=0.18 Score=46.11 Aligned_cols=54 Identities=26% Similarity=0.227 Sum_probs=42.8
Q ss_pred EEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCC
Q 022087 133 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPD 209 (303)
Q Consensus 133 LVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~~-~yEivIfTas~~~YA~~il~~LDp~ 209 (303)
+++||||||+++.. ...+...+.++++.+ ...+++-|.-....+..+++.++..
T Consensus 2 i~~DlDGTll~~~~-----------------------~~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~ 56 (256)
T TIGR01486 2 IFTDLDGTLLDPHG-----------------------YDWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLE 56 (256)
T ss_pred EEEcCCCCCcCCCC-----------------------cCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 68999999998631 012357899999985 5899999999999999999988743
No 122
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=93.44 E-value=0.13 Score=49.03 Aligned_cols=53 Identities=17% Similarity=0.265 Sum_probs=41.1
Q ss_pred eEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhc-----ceEEEEEcCCc----HHHHHH
Q 022087 131 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-----MFEVVIFTASQ----SIYAAQ 201 (303)
Q Consensus 131 ~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~~-----~yEivIfTas~----~~YA~~ 201 (303)
+.++||+||||+++. ..-|++.++++++.. ...++++|... +.+++.
T Consensus 1 ~~~ifD~DGvL~~g~------------------------~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~ 56 (321)
T TIGR01456 1 FGFAFDIDGVLFRGK------------------------KPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEE 56 (321)
T ss_pred CEEEEeCcCceECCc------------------------cccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHH
Confidence 368999999999873 126899999999986 78889999764 566777
Q ss_pred HHHHhC
Q 022087 202 LLDILD 207 (303)
Q Consensus 202 il~~LD 207 (303)
+.+.++
T Consensus 57 l~~~lG 62 (321)
T TIGR01456 57 ISSLLG 62 (321)
T ss_pred HHHHcC
Confidence 766654
No 123
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=93.20 E-value=0.23 Score=43.88 Aligned_cols=53 Identities=17% Similarity=0.236 Sum_probs=39.7
Q ss_pred EEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCC
Q 022087 133 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDP 208 (303)
Q Consensus 133 LVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp 208 (303)
+++||||||+++.. ...|-..+-|+++. +...+++-|.-....+.++++.+..
T Consensus 1 i~~DlDGTLl~~~~-----------------------~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~ 54 (225)
T TIGR01482 1 IASDIDGTLTDPNR-----------------------AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGT 54 (225)
T ss_pred CeEeccCccCCCCc-----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCC
Confidence 57999999997631 13455667777777 5588888888888888888888873
No 124
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=93.10 E-value=0.13 Score=44.68 Aligned_cols=86 Identities=24% Similarity=0.292 Sum_probs=58.8
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEee-ccceec---CC--c--------ccccc
Q 022087 169 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYR-ESCIFS---DG--T--------YTKDL 233 (303)
Q Consensus 169 v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R-~~c~~~---~g--~--------~~KDL 233 (303)
...+|++.++|+++. +.+.++|-|++...+++++++.++-.. +|..++.. ++=.+. .| . ...-+
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~-~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~ 164 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDN-AIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAELL 164 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcc-eEecceEEcCCCEEeCCccCCCCCChHHHHHHHHHH
Confidence 357999999999997 579999999999999999999998765 66665442 110010 00 0 01112
Q ss_pred cccCCCCCcEEEEECChhhhcc
Q 022087 234 TVLGVDLAKVAIIDNSPQVFRL 255 (303)
Q Consensus 234 ~~Lgrdl~~vIIIDDs~~~~~~ 255 (303)
+..+.++++++.+-|++.-..+
T Consensus 165 ~~~~~~~~~~~~~gDs~~D~~~ 186 (202)
T TIGR01490 165 AEEQIDLKDSYAYGDSISDLPL 186 (202)
T ss_pred HHcCCCHHHcEeeeCCcccHHH
Confidence 3346677788888888865544
No 125
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=93.01 E-value=0.28 Score=41.96 Aligned_cols=85 Identities=19% Similarity=0.263 Sum_probs=50.6
Q ss_pred EeeCchHHHHHHHhhcceEEEEEcCCcHHH--HHHHHHHhCCCCCce--eeeEeeccceecCCcccccccccCCCCCcEE
Q 022087 169 VKQRPHLKTFLERVAEMFEVVIFTASQSIY--AAQLLDILDPDGKLI--SRRVYRESCIFSDGTYTKDLTVLGVDLAKVA 244 (303)
Q Consensus 169 v~~RP~l~eFL~~l~~~yEivIfTas~~~Y--A~~il~~LDp~~~~f--~~rl~R~~c~~~~g~~~KDL~~Lgrdl~~vI 244 (303)
...-||+++-+++|-++|+|+|-||++..+ .+.-.+-|--.-.++ ++.+++. . |++-+. =+
T Consensus 67 L~V~p~aq~v~keLt~~y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn~vfCg-----n----Knivka------Di 131 (180)
T COG4502 67 LGVQPFAQTVLKELTSIYNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQNIVFCG-----N----KNIVKA------DI 131 (180)
T ss_pred cCccccHHHHHHHHHhhheEEEEEeccCCchhHHHHHHHHHHHCCCCChhhEEEec-----C----CCeEEe------eE
Confidence 567899999999999999999999995432 222222221110111 1223321 1 222111 37
Q ss_pred EEECChhhhccCCCceeeeccccC
Q 022087 245 IIDNSPQVFRLQVNNGIPIESWFD 268 (303)
Q Consensus 245 IIDDs~~~~~~~~~N~I~I~~f~~ 268 (303)
+|||.|........|-|.-..-..
T Consensus 132 lIDDnp~nLE~F~G~kIlFdA~HN 155 (180)
T COG4502 132 LIDDNPLNLENFKGNKILFDAHHN 155 (180)
T ss_pred EecCCchhhhhccCceEEEecccc
Confidence 899999888777777776655444
No 126
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=92.98 E-value=0.18 Score=44.13 Aligned_cols=53 Identities=32% Similarity=0.373 Sum_probs=42.8
Q ss_pred EEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhC
Q 022087 133 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILD 207 (303)
Q Consensus 133 LVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~~-~yEivIfTas~~~YA~~il~~LD 207 (303)
+++|+||||+.+.. ....|.+.+.|+++.+ ...++|-|......+..+++.++
T Consensus 2 i~~D~DgTL~~~~~----------------------~~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 2 LFFDLDGTLLDPNA----------------------HELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred EEEeCcCCCcCCCC----------------------CcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 78999999997420 1245888999999985 48999999999999999998753
No 127
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=92.88 E-value=0.23 Score=46.10 Aligned_cols=60 Identities=15% Similarity=0.071 Sum_probs=40.5
Q ss_pred CceEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhc--ceEEEEEcCCcHHHHHHHHHHh
Q 022087 129 KSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE--MFEVVIFTASQSIYAAQLLDIL 206 (303)
Q Consensus 129 ~k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~~--~yEivIfTas~~~YA~~il~~L 206 (303)
++..+++|+||||+.....+.. ...-|.+.+-|+.+++ ...++|.|.-...-+..++..+
T Consensus 13 ~~~li~~D~DGTLl~~~~~p~~------------------~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~ 74 (266)
T PRK10187 13 ANYAWFFDLDGTLAEIKPHPDQ------------------VVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPY 74 (266)
T ss_pred CCEEEEEecCCCCCCCCCCccc------------------ccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcc
Confidence 3678999999999976432211 1234777777888874 4677777777777666666544
No 128
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=92.69 E-value=0.14 Score=47.19 Aligned_cols=47 Identities=17% Similarity=0.154 Sum_probs=34.8
Q ss_pred eEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCcHH
Q 022087 131 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSI 197 (303)
Q Consensus 131 ~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~~~ 197 (303)
++++||+||||++..... =..=|++.++|+++. +...+++.|..+..
T Consensus 2 k~i~~D~DGtl~~~~~~~--------------------~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~ 49 (257)
T TIGR01458 2 KGVLLDISGVLYISDAKS--------------------GVAVPGSQEAVKRLRGASVKVRFVTNTTKE 49 (257)
T ss_pred CEEEEeCCCeEEeCCCcc--------------------cCcCCCHHHHHHHHHHCCCeEEEEECCCCC
Confidence 378999999998763100 013589999999998 56999999976544
No 129
>PLN02645 phosphoglycolate phosphatase
Probab=92.46 E-value=0.18 Score=47.85 Aligned_cols=52 Identities=15% Similarity=0.108 Sum_probs=39.5
Q ss_pred eEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHh
Q 022087 131 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDIL 206 (303)
Q Consensus 131 ~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~L 206 (303)
..++||+||||++.. .+ =||+.++|+++. +...+++.|.....-...+++.|
T Consensus 29 ~~~~~D~DGtl~~~~----------------------~~--~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l 81 (311)
T PLN02645 29 ETFIFDCDGVIWKGD----------------------KL--IEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKF 81 (311)
T ss_pred CEEEEeCcCCeEeCC----------------------cc--CcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHH
Confidence 489999999998752 11 299999999998 68999999998755555555444
No 130
>PTZ00174 phosphomannomutase; Provisional
Probab=92.45 E-value=0.32 Score=44.41 Aligned_cols=52 Identities=19% Similarity=0.253 Sum_probs=36.7
Q ss_pred ceEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHH
Q 022087 130 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLD 204 (303)
Q Consensus 130 k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~ 204 (303)
.+.+++||||||+++.. ...|...+-|+++. +...++|-|.-...-+...+.
T Consensus 5 ~klia~DlDGTLL~~~~-----------------------~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l~ 57 (247)
T PTZ00174 5 KTILLFDVDGTLTKPRN-----------------------PITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLG 57 (247)
T ss_pred CeEEEEECcCCCcCCCC-----------------------CCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHh
Confidence 46899999999998742 13466777888887 558888888866554444443
No 131
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=92.32 E-value=0.37 Score=45.85 Aligned_cols=57 Identities=12% Similarity=0.155 Sum_probs=43.5
Q ss_pred eEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCC
Q 022087 131 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 209 (303)
Q Consensus 131 ~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~ 209 (303)
+.+++||||||+++.. | .-+-+.+-|+++. +...+++.|+-+..-+..+.+.|...
T Consensus 2 KLIftDLDGTLLd~~~---------------------~--~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 2 RLVLSSLDGSLLDLEF---------------------N--SYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred cEEEEeCCCCCcCCCC---------------------c--CCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 5788999999998631 1 1244677888888 56899999998888888888888765
Q ss_pred C
Q 022087 210 G 210 (303)
Q Consensus 210 ~ 210 (303)
.
T Consensus 59 ~ 59 (302)
T PRK12702 59 H 59 (302)
T ss_pred C
Confidence 3
No 132
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=91.85 E-value=0.25 Score=45.99 Aligned_cols=41 Identities=20% Similarity=0.262 Sum_probs=32.6
Q ss_pred eEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCc
Q 022087 131 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQ 195 (303)
Q Consensus 131 ~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~ 195 (303)
..+++|+||||++.. ..-||+.++|+++. +...+++.|+.+
T Consensus 3 ~~~~~D~DGtl~~~~------------------------~~~~ga~e~l~~L~~~g~~~~~~Tnns 44 (279)
T TIGR01452 3 QGFIFDCDGVLWLGE------------------------RVVPGAPELLDRLARAGKAALFVTNNS 44 (279)
T ss_pred cEEEEeCCCceEcCC------------------------eeCcCHHHHHHHHHHCCCeEEEEeCCC
Confidence 378899999997752 13488999999998 568999999854
No 133
>PLN02423 phosphomannomutase
Probab=91.06 E-value=0.53 Score=43.10 Aligned_cols=55 Identities=18% Similarity=0.367 Sum_probs=36.6
Q ss_pred CCceEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhC
Q 022087 128 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILD 207 (303)
Q Consensus 128 ~~k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~~~yEivIfTas~~~YA~~il~~LD 207 (303)
+.+..+++||||||+.+.. ..-|...+-++++.+...+++.|.-. | ..+.+.+.
T Consensus 5 ~~~~i~~~D~DGTLl~~~~-----------------------~i~~~~~~ai~~l~~~i~fviaTGR~--~-~~~~~~~~ 58 (245)
T PLN02423 5 KPGVIALFDVDGTLTAPRK-----------------------EATPEMLEFMKELRKVVTVGVVGGSD--L-SKISEQLG 58 (245)
T ss_pred ccceEEEEeccCCCcCCCC-----------------------cCCHHHHHHHHHHHhCCEEEEECCcC--H-HHHHHHhc
Confidence 3455666999999997632 13466778899998777777777652 2 24445554
Q ss_pred C
Q 022087 208 P 208 (303)
Q Consensus 208 p 208 (303)
+
T Consensus 59 ~ 59 (245)
T PLN02423 59 K 59 (245)
T ss_pred c
Confidence 4
No 134
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=90.48 E-value=0.44 Score=43.71 Aligned_cols=53 Identities=21% Similarity=0.323 Sum_probs=36.3
Q ss_pred EEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCc---HHHHHHHHHHhC
Q 022087 132 TLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQ---SIYAAQLLDILD 207 (303)
Q Consensus 132 tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~---~~YA~~il~~LD 207 (303)
.+++|+||||++... .=|++.++|+++. +...+++.|.++ ..-..+.++.+.
T Consensus 3 ~~~~D~DGtl~~~~~------------------------~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g 58 (249)
T TIGR01457 3 GYLIDLDGTMYKGKE------------------------RIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFD 58 (249)
T ss_pred EEEEeCCCceEcCCe------------------------eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcC
Confidence 789999999987521 1368899999998 568888888633 333333445454
Q ss_pred C
Q 022087 208 P 208 (303)
Q Consensus 208 p 208 (303)
.
T Consensus 59 ~ 59 (249)
T TIGR01457 59 I 59 (249)
T ss_pred C
Confidence 3
No 135
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=90.20 E-value=0.58 Score=42.53 Aligned_cols=60 Identities=25% Similarity=0.081 Sum_probs=40.0
Q ss_pred ceEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhcce-EEEEEcCCcHHHHHHHHHHhCC
Q 022087 130 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMF-EVVIFTASQSIYAAQLLDILDP 208 (303)
Q Consensus 130 k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~~~y-EivIfTas~~~YA~~il~~LDp 208 (303)
++.++.||||||+.+.... -...|.+.+.++++.+.- .+++-|.-+..-+.++++.+.+
T Consensus 1 ~~li~tDlDGTLl~~~~~~--------------------~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~ 60 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTDGD--------------------NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPL 60 (249)
T ss_pred CeEEEEcCCCcCcCCCCCC--------------------hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCC
Confidence 3678889999999642100 124578888888877544 6666666666666777666654
Q ss_pred C
Q 022087 209 D 209 (303)
Q Consensus 209 ~ 209 (303)
.
T Consensus 61 ~ 61 (249)
T TIGR01485 61 L 61 (249)
T ss_pred C
Confidence 3
No 136
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=89.96 E-value=0.62 Score=45.25 Aligned_cols=53 Identities=19% Similarity=0.254 Sum_probs=44.1
Q ss_pred eEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHh-C------CCCCceeeeEe
Q 022087 166 TVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDIL-D------PDGKLISRRVY 218 (303)
Q Consensus 166 ~~~v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~L-D------p~~~~f~~rl~ 218 (303)
.-||.+-||+.++|+++. +...+.|-|++...|++.+++.+ + .+..+|+..+.
T Consensus 180 ~~yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt 240 (343)
T TIGR02244 180 EKYVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIV 240 (343)
T ss_pred HHHhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEe
Confidence 357888999999999998 56999999999999999999997 5 24456765554
No 137
>PLN02887 hydrolase family protein
Probab=89.80 E-value=0.76 Score=47.65 Aligned_cols=58 Identities=22% Similarity=0.209 Sum_probs=45.4
Q ss_pred CceEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhC
Q 022087 129 KSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILD 207 (303)
Q Consensus 129 ~k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LD 207 (303)
+.+.+++||||||+++.. ..-|...+-|+++. +...++|-|.-...-+..+++.++
T Consensus 307 ~iKLIa~DLDGTLLn~d~-----------------------~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L~ 363 (580)
T PLN02887 307 KFSYIFCDMDGTLLNSKS-----------------------QISETNAKALKEALSRGVKVVIATGKARPAVIDILKMVD 363 (580)
T ss_pred CccEEEEeCCCCCCCCCC-----------------------ccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhC
Confidence 456899999999997631 13455677788887 679999999998888888888887
Q ss_pred CC
Q 022087 208 PD 209 (303)
Q Consensus 208 p~ 209 (303)
..
T Consensus 364 l~ 365 (580)
T PLN02887 364 LA 365 (580)
T ss_pred cc
Confidence 53
No 138
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=89.80 E-value=0.45 Score=44.67 Aligned_cols=53 Identities=19% Similarity=0.200 Sum_probs=39.3
Q ss_pred ceEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHh
Q 022087 130 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDIL 206 (303)
Q Consensus 130 k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~~-~yEivIfTas~~~YA~~il~~L 206 (303)
..+.++||||||++.. ..=||+.+||+++.+ .-.+++-|.++.+-.+.+..+|
T Consensus 8 y~~~l~DlDGvl~~G~------------------------~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 8 YDGFLFDLDGVLYRGN------------------------EAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred cCEEEEcCcCceEeCC------------------------ccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 3478999999998763 235999999999995 5888888988765444444433
No 139
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=89.39 E-value=1 Score=47.42 Aligned_cols=61 Identities=18% Similarity=0.131 Sum_probs=46.4
Q ss_pred CCCCceEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHH
Q 022087 126 QGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLD 204 (303)
Q Consensus 126 ~~~~k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~ 204 (303)
...+++.+++||||||+++.. ++. +...+-|+++. +...+++.|.-....+..+++
T Consensus 412 ~~~~~KLIfsDLDGTLLd~d~---------------------~i~--~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~ 468 (694)
T PRK14502 412 SGQFKKIVYTDLDGTLLNPLT---------------------YSY--STALDALRLLKDKELPLVFCSAKTMGEQDLYRN 468 (694)
T ss_pred cCceeeEEEEECcCCCcCCCC---------------------ccC--HHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHH
Confidence 356778899999999998632 111 23466788887 568999999999999999999
Q ss_pred HhCCC
Q 022087 205 ILDPD 209 (303)
Q Consensus 205 ~LDp~ 209 (303)
.|+..
T Consensus 469 ~Lgl~ 473 (694)
T PRK14502 469 ELGIK 473 (694)
T ss_pred HcCCC
Confidence 88754
No 140
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=87.74 E-value=0.7 Score=42.38 Aligned_cols=90 Identities=14% Similarity=0.188 Sum_probs=54.4
Q ss_pred CCCceEEEEecCcccccccccccC----CCCc---eeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHH
Q 022087 127 GRKSVTLVLDLDETLVHSTLEYCD----DADF---TFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIY 198 (303)
Q Consensus 127 ~~~k~tLVLDLDeTLvhs~~~~~~----~~d~---~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~~~Y 198 (303)
..++..+|||+|||++....-... ...+ .+.-+.... --..-|++.+|++++. +.++|++.|.-....
T Consensus 74 ~dg~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~----~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~ 149 (229)
T TIGR01675 74 GDGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKG----AAPALPEGLKLYQKIIELGIKIFLLSGRWEEL 149 (229)
T ss_pred CCCCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcC----CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHH
Confidence 357889999999999987531110 0000 000000111 1356799999999997 689999999998877
Q ss_pred HHHHHHHhCCCCCc-eeeeEeec
Q 022087 199 AAQLLDILDPDGKL-ISRRVYRE 220 (303)
Q Consensus 199 A~~il~~LDp~~~~-f~~rl~R~ 220 (303)
.+...+.|.-.|-- +++.+.|.
T Consensus 150 r~~T~~nL~~~G~~~~~~LiLR~ 172 (229)
T TIGR01675 150 RNATLDNLINAGFTGWKHLILRG 172 (229)
T ss_pred HHHHHHHHHHcCCCCcCeeeecC
Confidence 55555555433311 24455564
No 141
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=87.72 E-value=1.3 Score=45.73 Aligned_cols=86 Identities=15% Similarity=0.110 Sum_probs=59.0
Q ss_pred EEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecCCcccccccccCCCCCcEEEE
Q 022087 168 YVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAII 246 (303)
Q Consensus 168 ~v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~g~~~KDL~~Lgrdl~~vIII 246 (303)
.-..||++.++++++. ..++++|-|...+.+|+.+++.+.-+ +|... ....+...++. +....++++.|
T Consensus 403 ~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~--~~~~~-----~p~~K~~~v~~---l~~~~~~v~~V 472 (562)
T TIGR01511 403 EDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN--VRAEV-----LPDDKAALIKE---LQEKGRVVAMV 472 (562)
T ss_pred cccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc--EEccC-----ChHHHHHHHHH---HHHcCCEEEEE
Confidence 3568999999999998 46999999999999999999999764 22211 00111122333 33456789999
Q ss_pred ECChhhhccCCCceeee
Q 022087 247 DNSPQVFRLQVNNGIPI 263 (303)
Q Consensus 247 DDs~~~~~~~~~N~I~I 263 (303)
-|...-...-...++.|
T Consensus 473 GDg~nD~~al~~A~vgi 489 (562)
T TIGR01511 473 GDGINDAPALAQADVGI 489 (562)
T ss_pred eCCCccHHHHhhCCEEE
Confidence 99987665433344444
No 142
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=87.31 E-value=0.72 Score=41.86 Aligned_cols=50 Identities=26% Similarity=0.323 Sum_probs=36.7
Q ss_pred EEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhc-ceEEEEEcCCc----HHHHHHHHHHh
Q 022087 133 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQ----SIYAAQLLDIL 206 (303)
Q Consensus 133 LVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~~-~yEivIfTas~----~~YA~~il~~L 206 (303)
++||+||||+.+.. .=|++.++|+.+.+ .+.+++-|.+. ..+++.+.+.+
T Consensus 1 ~lfD~DGvL~~~~~------------------------~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~ 55 (236)
T TIGR01460 1 FLFDIDGVLWLGHK------------------------PIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLL 55 (236)
T ss_pred CEEeCcCccCcCCc------------------------cCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhc
Confidence 47999999988731 13688999999984 58888888444 56666666643
No 143
>PLN02151 trehalose-phosphatase
Probab=86.99 E-value=1.2 Score=43.40 Aligned_cols=60 Identities=15% Similarity=0.187 Sum_probs=45.0
Q ss_pred CCCceEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHH
Q 022087 127 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLD 204 (303)
Q Consensus 127 ~~~k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~~~yEivIfTas~~~YA~~il~ 204 (303)
..++..|+||+||||+--...+ -.+..-|.+.+-|+.|++.+.++|-|.-...-++.++.
T Consensus 95 ~~~~~ll~lDyDGTL~PIv~~P------------------~~A~~~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~ 154 (354)
T PLN02151 95 EGKQIVMFLDYDGTLSPIVDDP------------------DRAFMSKKMRNTVRKLAKCFPTAIVSGRCREKVSSFVK 154 (354)
T ss_pred cCCceEEEEecCccCCCCCCCc------------------ccccCCHHHHHHHHHHhcCCCEEEEECCCHHHHHHHcC
Confidence 4467899999999998432111 12456789999999999888999999887777776664
No 144
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=86.95 E-value=0.28 Score=45.37 Aligned_cols=80 Identities=20% Similarity=0.226 Sum_probs=41.8
Q ss_pred CCCCceEEEEecCcccccccccc----cCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhcceEEEEE-cCCcHHH-H
Q 022087 126 QGRKSVTLVLDLDETLVHSTLEY----CDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIF-TASQSIY-A 199 (303)
Q Consensus 126 ~~~~k~tLVLDLDeTLvhs~~~~----~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~~~yEivIf-Tas~~~Y-A 199 (303)
.+.+++.+|+|||||.+.-+.-. ..+.-|.-..+ +--...---+.=||+.|||+++-++--.+.| |.-.++- .
T Consensus 75 ~k~K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~W-d~wV~a~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~ 153 (274)
T COG2503 75 KKGKKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETW-DKWVQAKKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEK 153 (274)
T ss_pred ccCCCceEEEecchHhhcCccccchhhhcCCCCCccch-HHHHhhcccccCccHHHHHHHHHhcCcEEEEEeccchhccc
Confidence 34566699999999999875311 11111110000 0000000135569999999999866544444 4434443 3
Q ss_pred HHHHHHh
Q 022087 200 AQLLDIL 206 (303)
Q Consensus 200 ~~il~~L 206 (303)
++-++.|
T Consensus 154 ~~T~~nL 160 (274)
T COG2503 154 DGTIENL 160 (274)
T ss_pred chhHHHH
Confidence 4444444
No 145
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=86.77 E-value=1.1 Score=38.75 Aligned_cols=80 Identities=19% Similarity=0.176 Sum_probs=58.6
Q ss_pred EEeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeecc-ceecCCcccccccccCCCCCcEEE
Q 022087 168 YVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRES-CIFSDGTYTKDLTVLGVDLAKVAI 245 (303)
Q Consensus 168 ~v~~RP~l~eFL~~l~~-~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~-c~~~~g~~~KDL~~Lgrdl~~vII 245 (303)
.-..||++.++|++|.+ .+.++|.|......|..+.+.+.... ..++.+. +.-.+..+.+-++.++.+.+.|+.
T Consensus 125 ~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~----~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~ 200 (215)
T PF00702_consen 125 RDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD----SIVFARVIGKPEPKIFLRIIKELQVKPGEVAM 200 (215)
T ss_dssp EEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS----EEEEESHETTTHHHHHHHHHHHHTCTGGGEEE
T ss_pred cCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc----ccccccccccccchhHHHHHHHHhcCCCEEEE
Confidence 35789999999999996 59999999999999999999997743 2222221 111112334556677878889999
Q ss_pred EECChh
Q 022087 246 IDNSPQ 251 (303)
Q Consensus 246 IDDs~~ 251 (303)
|-|...
T Consensus 201 vGDg~n 206 (215)
T PF00702_consen 201 VGDGVN 206 (215)
T ss_dssp EESSGG
T ss_pred EccCHH
Confidence 999874
No 146
>PLN02580 trehalose-phosphatase
Probab=86.55 E-value=1.3 Score=43.68 Aligned_cols=61 Identities=20% Similarity=0.226 Sum_probs=47.6
Q ss_pred CCCceEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHH
Q 022087 127 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDI 205 (303)
Q Consensus 127 ~~~k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~~~yEivIfTas~~~YA~~il~~ 205 (303)
..++..|+||.||||.--...+ --+..-|++.+-|+.|++.+.++|-|.-...-.+..+..
T Consensus 116 ~~k~~~LfLDyDGTLaPIv~~P------------------d~A~~s~~~~~aL~~La~~~~VAIVSGR~~~~L~~~l~~ 176 (384)
T PLN02580 116 KGKKIALFLDYDGTLSPIVDDP------------------DRALMSDAMRSAVKNVAKYFPTAIISGRSRDKVYELVGL 176 (384)
T ss_pred hcCCeEEEEecCCccCCCCCCc------------------ccccCCHHHHHHHHHHhhCCCEEEEeCCCHHHHHHHhCC
Confidence 4567899999999997543221 125567899999999999999999999888887777753
No 147
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=86.37 E-value=1.9 Score=38.48 Aligned_cols=42 Identities=14% Similarity=0.297 Sum_probs=37.5
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCC
Q 022087 169 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDG 210 (303)
Q Consensus 169 v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~~ 210 (303)
+++|||.++|.+++. +--.++|-|+|+..|..+++..+--+.
T Consensus 72 i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke 114 (220)
T COG4359 72 IKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKE 114 (220)
T ss_pred cccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhcccc
Confidence 789999999999999 458999999999999999999886443
No 148
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=86.31 E-value=1.3 Score=41.64 Aligned_cols=61 Identities=20% Similarity=0.151 Sum_probs=45.5
Q ss_pred CCCCceEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhcceE--EEEEcCCcHHHHHHHH
Q 022087 126 QGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFE--VVIFTASQSIYAAQLL 203 (303)
Q Consensus 126 ~~~~k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~~~yE--ivIfTas~~~YA~~il 203 (303)
...++.+++||.||||.+....+. -+..=+++.+-|+.|+..+. ++|.|.-+..-.+..+
T Consensus 14 ~~a~~~~~~lDyDGTl~~i~~~p~------------------~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~ 75 (266)
T COG1877 14 LNARKRLLFLDYDGTLTEIVPHPE------------------AAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLF 75 (266)
T ss_pred ccccceEEEEeccccccccccCcc------------------ccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhc
Confidence 455778999999999998754332 24456788889999998877 7777777777777666
Q ss_pred H
Q 022087 204 D 204 (303)
Q Consensus 204 ~ 204 (303)
.
T Consensus 76 ~ 76 (266)
T COG1877 76 G 76 (266)
T ss_pred C
Confidence 6
No 149
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=86.10 E-value=0.71 Score=42.02 Aligned_cols=48 Identities=19% Similarity=0.152 Sum_probs=32.3
Q ss_pred CceEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhcceEE--EEEcCC
Q 022087 129 KSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEV--VIFTAS 194 (303)
Q Consensus 129 ~k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~~~yEi--vIfTas 194 (303)
++..|+||+||||+-....+. ....-|++.+.|+.|++.... +|-|.-
T Consensus 2 ~~~~l~lD~DGTL~~~~~~p~------------------~~~~~~~~~~~L~~L~~~~~~~v~ivSGR 51 (244)
T TIGR00685 2 RKRAFFFDYDGTLSEIVPDPD------------------AAVVSDRLLTILQKLAARPHNAIWIISGR 51 (244)
T ss_pred CcEEEEEecCccccCCcCCCc------------------ccCCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 567899999999986422111 134468899999999876544 345544
No 150
>PLN03017 trehalose-phosphatase
Probab=85.33 E-value=1.7 Score=42.65 Aligned_cols=61 Identities=16% Similarity=0.178 Sum_probs=44.6
Q ss_pred CCCceEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHH
Q 022087 127 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDI 205 (303)
Q Consensus 127 ~~~k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~~~yEivIfTas~~~YA~~il~~ 205 (303)
..++..|+||+||||+--...+ -....-|.+.+-|+++++.+.++|-|.-...-+..+++.
T Consensus 108 ~~k~~llflD~DGTL~Piv~~p------------------~~a~i~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~l 168 (366)
T PLN03017 108 RGKQIVMFLDYDGTLSPIVDDP------------------DKAFMSSKMRRTVKKLAKCFPTAIVTGRCIDKVYNFVKL 168 (366)
T ss_pred cCCCeEEEEecCCcCcCCcCCc------------------ccccCCHHHHHHHHHHhcCCcEEEEeCCCHHHHHHhhcc
Confidence 4467899999999998322111 012355888899999999999999998888877777543
No 151
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=83.86 E-value=0.49 Score=41.29 Aligned_cols=14 Identities=36% Similarity=0.648 Sum_probs=12.7
Q ss_pred EEEEecCccccccc
Q 022087 132 TLVLDLDETLVHST 145 (303)
Q Consensus 132 tLVLDLDeTLvhs~ 145 (303)
.++||+||||+.|.
T Consensus 2 ~viFD~DGTLiDs~ 15 (197)
T TIGR01548 2 ALVLDMDGVMADVS 15 (197)
T ss_pred ceEEecCceEEech
Confidence 57999999999996
No 152
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=83.69 E-value=0.18 Score=45.96 Aligned_cols=75 Identities=15% Similarity=0.173 Sum_probs=43.4
Q ss_pred CCceEEEEecCccccccccc----ccCCCCc---eeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHH
Q 022087 128 RKSVTLVLDLDETLVHSTLE----YCDDADF---TFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYA 199 (303)
Q Consensus 128 ~~k~tLVLDLDeTLvhs~~~----~~~~~d~---~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA 199 (303)
.++..+|||+|||++..... ......+ .+.-+..... -..=||+.+|++.+. +.++|++-|.-....-
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~----~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r 145 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGK----APAIPGALELYNYARSRGVKVFFITGRPESQR 145 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTG----GEEETTHHHHHHHHHHTTEEEEEEEEEETTCH
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhccc----CcccHHHHHHHHHHHHCCCeEEEEecCCchhH
Confidence 57789999999999965321 0000000 0000001111 134588999999998 5699999887665543
Q ss_pred HHHHHHh
Q 022087 200 AQLLDIL 206 (303)
Q Consensus 200 ~~il~~L 206 (303)
+.-++.|
T Consensus 146 ~~T~~nL 152 (229)
T PF03767_consen 146 EATEKNL 152 (229)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4433333
No 153
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=83.48 E-value=0.84 Score=39.90 Aligned_cols=80 Identities=25% Similarity=0.355 Sum_probs=42.6
Q ss_pred EeeCchHHHHHHHhhcc-eEEEEEcCCcHH-H---HH---HHHHHhCCCCCceeeeEeeccceecCCcccccccccCCCC
Q 022087 169 VKQRPHLKTFLERVAEM-FEVVIFTASQSI-Y---AA---QLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDL 240 (303)
Q Consensus 169 v~~RP~l~eFL~~l~~~-yEivIfTas~~~-Y---A~---~il~~LDp~~~~f~~rl~R~~c~~~~g~~~KDL~~Lgrdl 240 (303)
...=||+.|.|++|.+. +++++-|+.... + +. .-++..-|. ......++..+ |. .++.|
T Consensus 72 l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~-i~~~~~~~~~~---------K~--~v~~D- 138 (191)
T PF06941_consen 72 LPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPF-IPYDNLIFTGD---------KT--LVGGD- 138 (191)
T ss_dssp --B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTH-HHHCCEEEESS---------GG--GC--S-
T ss_pred CCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCC-CchheEEEecC---------CC--eEecc-
Confidence 56679999999999966 577777776544 1 22 223322121 11222333211 22 24443
Q ss_pred CcEEEEECChhhhccCCCceeeec
Q 022087 241 AKVAIIDNSPQVFRLQVNNGIPIE 264 (303)
Q Consensus 241 ~~vIIIDDs~~~~~~~~~N~I~I~ 264 (303)
++|||++.........|+++-
T Consensus 139 ---vlIDD~~~n~~~~~~~g~~~i 159 (191)
T PF06941_consen 139 ---VLIDDRPHNLEQFANAGIPVI 159 (191)
T ss_dssp ---EEEESSSHHHSS-SSESSEEE
T ss_pred ---EEecCChHHHHhccCCCceEE
Confidence 899999999876666774443
No 154
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=82.87 E-value=0.64 Score=42.58 Aligned_cols=48 Identities=19% Similarity=0.396 Sum_probs=38.8
Q ss_pred EeeCchHHHHHHHhhc--ceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeE
Q 022087 169 VKQRPHLKTFLERVAE--MFEVVIFTASQSIYAAQLLDILDPDGKLISRRV 217 (303)
Q Consensus 169 v~~RP~l~eFL~~l~~--~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl 217 (303)
+..-||+-+.++.+++ .||++|-|-+..-+.+.+++..+-.. +|+..+
T Consensus 83 iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d-~F~~If 132 (256)
T KOG3120|consen 83 IPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHD-LFSEIF 132 (256)
T ss_pred CCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHH-HHHHHh
Confidence 6678999999999984 48999999999999999999986542 444333
No 155
>PRK11590 hypothetical protein; Provisional
Probab=81.83 E-value=0.86 Score=40.49 Aligned_cols=39 Identities=18% Similarity=0.066 Sum_probs=34.8
Q ss_pred EeeCchHHHHH-HHhh-cceEEEEEcCCcHHHHHHHHHHhC
Q 022087 169 VKQRPHLKTFL-ERVA-EMFEVVIFTASQSIYAAQLLDILD 207 (303)
Q Consensus 169 v~~RP~l~eFL-~~l~-~~yEivIfTas~~~YA~~il~~LD 207 (303)
+..+||+.+.| +.+. +.+.++|-|++...|+++++..+.
T Consensus 94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~ 134 (211)
T PRK11590 94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTP 134 (211)
T ss_pred CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcc
Confidence 45689999999 5677 689999999999999999999876
No 156
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=80.97 E-value=0.88 Score=40.00 Aligned_cols=16 Identities=31% Similarity=0.594 Sum_probs=13.8
Q ss_pred eEEEEecCcccccccc
Q 022087 131 VTLVLDLDETLVHSTL 146 (303)
Q Consensus 131 ~tLVLDLDeTLvhs~~ 146 (303)
..++||+||||+++..
T Consensus 3 ~~viFDlDGTL~ds~~ 18 (221)
T TIGR02253 3 KAIFFDLDDTLIDTSG 18 (221)
T ss_pred eEEEEeCCCCCcCCCC
Confidence 4799999999999853
No 157
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=80.10 E-value=0.88 Score=38.70 Aligned_cols=16 Identities=19% Similarity=0.493 Sum_probs=13.9
Q ss_pred eEEEEecCcccccccc
Q 022087 131 VTLVLDLDETLVHSTL 146 (303)
Q Consensus 131 ~tLVLDLDeTLvhs~~ 146 (303)
+.++||+||||+.+..
T Consensus 2 ~~iiFD~DGTL~ds~~ 17 (185)
T TIGR02009 2 KAVIFDMDGVIVDTAP 17 (185)
T ss_pred CeEEEcCCCcccCChH
Confidence 4789999999999963
No 158
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=79.80 E-value=1 Score=40.79 Aligned_cols=15 Identities=20% Similarity=0.215 Sum_probs=13.4
Q ss_pred eEEEEecCccccccc
Q 022087 131 VTLVLDLDETLVHST 145 (303)
Q Consensus 131 ~tLVLDLDeTLvhs~ 145 (303)
++++||+||||+.+.
T Consensus 3 k~viFD~DGTLiDs~ 17 (253)
T TIGR01422 3 EAVIFDWAGTTVDFG 17 (253)
T ss_pred eEEEEeCCCCeecCC
Confidence 589999999999984
No 159
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=79.35 E-value=4.1 Score=41.80 Aligned_cols=87 Identities=14% Similarity=0.085 Sum_probs=61.4
Q ss_pred EEeeCchHHHHHHHhh-cc-eEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecCCcccccccccCCCCCcEEE
Q 022087 168 YVKQRPHLKTFLERVA-EM-FEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAI 245 (303)
Q Consensus 168 ~v~~RP~l~eFL~~l~-~~-yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~g~~~KDL~~Lgrdl~~vII 245 (303)
....|||+.+.|+++. +. ++++|-|...+.+|..+++.++-+. +|....- ..+... ++.++....++++
T Consensus 382 ~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~-~f~~~~p-----~~K~~~---v~~l~~~~~~v~~ 452 (556)
T TIGR01525 382 RDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE-VHAELLP-----EDKLAI---VKELQEEGGVVAM 452 (556)
T ss_pred cccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe-eeccCCH-----HHHHHH---HHHHHHcCCEEEE
Confidence 3678999999999997 56 9999999999999999999998864 4432110 111122 3334445568999
Q ss_pred EECChhhhccCCCceeee
Q 022087 246 IDNSPQVFRLQVNNGIPI 263 (303)
Q Consensus 246 IDDs~~~~~~~~~N~I~I 263 (303)
|-|...-...-...++-|
T Consensus 453 vGDg~nD~~al~~A~vgi 470 (556)
T TIGR01525 453 VGDGINDAPALAAADVGI 470 (556)
T ss_pred EECChhHHHHHhhCCEeE
Confidence 999997665544444444
No 160
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=79.30 E-value=1 Score=40.97 Aligned_cols=17 Identities=29% Similarity=0.382 Sum_probs=14.5
Q ss_pred ceEEEEecCcccccccc
Q 022087 130 SVTLVLDLDETLVHSTL 146 (303)
Q Consensus 130 k~tLVLDLDeTLvhs~~ 146 (303)
-+.++||+||||++|..
T Consensus 22 ~k~viFDlDGTLiDs~~ 38 (248)
T PLN02770 22 LEAVLFDVDGTLCDSDP 38 (248)
T ss_pred cCEEEEcCCCccCcCHH
Confidence 35899999999999963
No 161
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=79.19 E-value=1 Score=41.34 Aligned_cols=16 Identities=19% Similarity=0.173 Sum_probs=13.9
Q ss_pred ceEEEEecCccccccc
Q 022087 130 SVTLVLDLDETLVHST 145 (303)
Q Consensus 130 k~tLVLDLDeTLvhs~ 145 (303)
-++++||+||||+++.
T Consensus 4 ~k~vIFDlDGTLiDs~ 19 (267)
T PRK13478 4 IQAVIFDWAGTTVDFG 19 (267)
T ss_pred eEEEEEcCCCCeecCC
Confidence 3589999999999984
No 162
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=79.17 E-value=0.99 Score=39.27 Aligned_cols=14 Identities=21% Similarity=0.211 Sum_probs=12.7
Q ss_pred EEEEecCccccccc
Q 022087 132 TLVLDLDETLVHST 145 (303)
Q Consensus 132 tLVLDLDeTLvhs~ 145 (303)
.++|||||||+.+.
T Consensus 2 ~viFDlDGTL~d~~ 15 (203)
T TIGR02252 2 LITFDAVGTLLALK 15 (203)
T ss_pred eEEEecCCceeeeC
Confidence 68999999999975
No 163
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=78.45 E-value=1.2 Score=41.30 Aligned_cols=16 Identities=44% Similarity=0.576 Sum_probs=14.1
Q ss_pred ceEEEEecCccccccc
Q 022087 130 SVTLVLDLDETLVHST 145 (303)
Q Consensus 130 k~tLVLDLDeTLvhs~ 145 (303)
.+.++||+||||+++.
T Consensus 13 ~k~viFDlDGTL~Ds~ 28 (272)
T PRK13223 13 PRLVMFDLDGTLVDSV 28 (272)
T ss_pred CCEEEEcCCCccccCH
Confidence 3499999999999995
No 164
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=78.42 E-value=1.2 Score=40.35 Aligned_cols=15 Identities=40% Similarity=0.627 Sum_probs=13.4
Q ss_pred eEEEEecCccccccc
Q 022087 131 VTLVLDLDETLVHST 145 (303)
Q Consensus 131 ~tLVLDLDeTLvhs~ 145 (303)
+.++|||||||+++.
T Consensus 11 k~iiFDlDGTL~D~~ 25 (238)
T PRK10748 11 SALTFDLDDTLYDNR 25 (238)
T ss_pred eeEEEcCcccccCCh
Confidence 589999999999984
No 165
>PRK11590 hypothetical protein; Provisional
Probab=77.45 E-value=3.6 Score=36.47 Aligned_cols=17 Identities=29% Similarity=0.421 Sum_probs=14.1
Q ss_pred CceEEEEecCccccccc
Q 022087 129 KSVTLVLDLDETLVHST 145 (303)
Q Consensus 129 ~k~tLVLDLDeTLvhs~ 145 (303)
+++.++|||||||++..
T Consensus 5 ~~k~~iFD~DGTL~~~d 21 (211)
T PRK11590 5 ERRVVFFDLDGTLHQQD 21 (211)
T ss_pred cceEEEEecCCCCcccc
Confidence 45699999999999653
No 166
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=77.28 E-value=1.3 Score=41.44 Aligned_cols=17 Identities=29% Similarity=0.415 Sum_probs=14.9
Q ss_pred CceEEEEecCccccccc
Q 022087 129 KSVTLVLDLDETLVHST 145 (303)
Q Consensus 129 ~k~tLVLDLDeTLvhs~ 145 (303)
+-..+|||+||||++|.
T Consensus 39 ~~k~VIFDlDGTLvDS~ 55 (286)
T PLN02779 39 LPEALLFDCDGVLVETE 55 (286)
T ss_pred CCcEEEEeCceeEEccc
Confidence 34689999999999997
No 167
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=76.70 E-value=1.2 Score=37.92 Aligned_cols=15 Identities=20% Similarity=0.503 Sum_probs=12.9
Q ss_pred EEEEecCcccccccc
Q 022087 132 TLVLDLDETLVHSTL 146 (303)
Q Consensus 132 tLVLDLDeTLvhs~~ 146 (303)
.+|||+||||+++..
T Consensus 1 ~iiFD~DGTL~ds~~ 15 (185)
T TIGR01990 1 AVIFDLDGVITDTAE 15 (185)
T ss_pred CeEEcCCCccccChH
Confidence 379999999999963
No 168
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=76.27 E-value=4.9 Score=42.63 Aligned_cols=62 Identities=23% Similarity=0.222 Sum_probs=43.7
Q ss_pred CCCceEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhc--ceEEEEEcCCcHHHHHHHHH
Q 022087 127 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE--MFEVVIFTASQSIYAAQLLD 204 (303)
Q Consensus 127 ~~~k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~~--~yEivIfTas~~~YA~~il~ 204 (303)
..++..+++|+||||+.....+. ....-|.+.+.|++|.+ ...++|-|.-.....+..+.
T Consensus 489 ~~~~rLi~~D~DGTL~~~~~~~~------------------~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~ 550 (726)
T PRK14501 489 AASRRLLLLDYDGTLVPFAPDPE------------------LAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFG 550 (726)
T ss_pred hccceEEEEecCccccCCCCCcc------------------cCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhC
Confidence 45677999999999996421110 11235788888999986 78888888888777776665
Q ss_pred Hh
Q 022087 205 IL 206 (303)
Q Consensus 205 ~L 206 (303)
.+
T Consensus 551 ~~ 552 (726)
T PRK14501 551 DL 552 (726)
T ss_pred CC
Confidence 43
No 169
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=76.23 E-value=2.5 Score=43.21 Aligned_cols=87 Identities=14% Similarity=0.106 Sum_probs=62.4
Q ss_pred EEeeCchHHHHHHHhh-cce-EEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecCCcccccccccCCCCCcEEE
Q 022087 168 YVKQRPHLKTFLERVA-EMF-EVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAI 245 (303)
Q Consensus 168 ~v~~RP~l~eFL~~l~-~~y-EivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~g~~~KDL~~Lgrdl~~vII 245 (303)
.-..||++.+.|+++. +.+ +++|-|+..+.+|+.+++.++... +|..... ..-.+-++.++...++++.
T Consensus 360 ~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~-~f~~~~p--------~~K~~~i~~l~~~~~~v~~ 430 (536)
T TIGR01512 360 SDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE-VHAELLP--------EDKLEIVKELREKYGPVAM 430 (536)
T ss_pred eccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh-hhhccCc--------HHHHHHHHHHHhcCCEEEE
Confidence 4678999999999998 468 999999999999999999998764 4432111 1112334445566688999
Q ss_pred EECChhhhccCCCceeee
Q 022087 246 IDNSPQVFRLQVNNGIPI 263 (303)
Q Consensus 246 IDDs~~~~~~~~~N~I~I 263 (303)
|-|...-...-...++.|
T Consensus 431 vGDg~nD~~al~~A~vgi 448 (536)
T TIGR01512 431 VGDGINDAPALAAADVGI 448 (536)
T ss_pred EeCCHHHHHHHHhCCEEE
Confidence 999987665544444444
No 170
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=75.66 E-value=1.1 Score=39.16 Aligned_cols=14 Identities=50% Similarity=0.691 Sum_probs=12.1
Q ss_pred EEEecCcccccccc
Q 022087 133 LVLDLDETLVHSTL 146 (303)
Q Consensus 133 LVLDLDeTLvhs~~ 146 (303)
+|||+||||+.|..
T Consensus 1 viFD~DGTL~Ds~~ 14 (213)
T TIGR01449 1 VLFDLDGTLVDSAP 14 (213)
T ss_pred CeecCCCccccCHH
Confidence 58999999999853
No 171
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=75.61 E-value=9.4 Score=35.22 Aligned_cols=58 Identities=19% Similarity=0.224 Sum_probs=39.5
Q ss_pred ceEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCC
Q 022087 130 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDP 208 (303)
Q Consensus 130 k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp 208 (303)
.+.+.+|||+||+-.+.+..+ +...+.++. ..|+|+..|+-++.=....-+.|+-
T Consensus 7 ~~lIFtDlD~TLl~~~ye~~p------------------------A~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v 62 (274)
T COG3769 7 PLLIFTDLDGTLLPHSYEWQP------------------------AAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGV 62 (274)
T ss_pred ceEEEEcccCcccCCCCCCCc------------------------cchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCC
Confidence 456778999999984433222 123455555 6799999998777666667788887
Q ss_pred CCC
Q 022087 209 DGK 211 (303)
Q Consensus 209 ~~~ 211 (303)
.+.
T Consensus 63 ~~~ 65 (274)
T COG3769 63 QGL 65 (274)
T ss_pred CCC
Confidence 753
No 172
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=74.87 E-value=1.4 Score=37.22 Aligned_cols=13 Identities=38% Similarity=0.516 Sum_probs=11.9
Q ss_pred EEEecCccccccc
Q 022087 133 LVLDLDETLVHST 145 (303)
Q Consensus 133 LVLDLDeTLvhs~ 145 (303)
++||+||||+.+.
T Consensus 2 viFD~DGTL~D~~ 14 (175)
T TIGR01493 2 MVFDVYGTLVDVH 14 (175)
T ss_pred eEEecCCcCcccH
Confidence 7899999999986
No 173
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=74.71 E-value=6.9 Score=34.95 Aligned_cols=38 Identities=13% Similarity=0.038 Sum_probs=33.8
Q ss_pred EeeCchHHHHHH-Hhh-cceEEEEEcCCcHHHHHHHHHHh
Q 022087 169 VKQRPHLKTFLE-RVA-EMFEVVIFTASQSIYAAQLLDIL 206 (303)
Q Consensus 169 v~~RP~l~eFL~-~l~-~~yEivIfTas~~~YA~~il~~L 206 (303)
+..+||+.+.|+ ++. +...++|-|++...|++++++..
T Consensus 93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~ 132 (210)
T TIGR01545 93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDS 132 (210)
T ss_pred CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhc
Confidence 357999999995 777 69999999999999999999774
No 174
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=74.60 E-value=1.8 Score=38.34 Aligned_cols=16 Identities=25% Similarity=0.505 Sum_probs=14.1
Q ss_pred ceEEEEecCccccccc
Q 022087 130 SVTLVLDLDETLVHST 145 (303)
Q Consensus 130 k~tLVLDLDeTLvhs~ 145 (303)
.+.++||+||||+++.
T Consensus 7 ~k~iiFD~DGTL~d~~ 22 (222)
T PRK10826 7 ILAAIFDMDGLLIDSE 22 (222)
T ss_pred CcEEEEcCCCCCCcCH
Confidence 4689999999999985
No 175
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=74.40 E-value=1.8 Score=37.96 Aligned_cols=15 Identities=20% Similarity=0.419 Sum_probs=13.2
Q ss_pred eEEEEecCccccccc
Q 022087 131 VTLVLDLDETLVHST 145 (303)
Q Consensus 131 ~tLVLDLDeTLvhs~ 145 (303)
++++|||||||+++.
T Consensus 3 k~viFDldGtL~d~~ 17 (211)
T TIGR02247 3 KAVIFDFGGVLLPSP 17 (211)
T ss_pred eEEEEecCCceecCH
Confidence 479999999999974
No 176
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=74.39 E-value=1.6 Score=38.27 Aligned_cols=16 Identities=38% Similarity=0.588 Sum_probs=13.7
Q ss_pred eEEEEecCcccccccc
Q 022087 131 VTLVLDLDETLVHSTL 146 (303)
Q Consensus 131 ~tLVLDLDeTLvhs~~ 146 (303)
+.++||+||||+++..
T Consensus 2 k~viFD~DGTL~d~~~ 17 (224)
T TIGR02254 2 KTLLFDLDDTILDFQA 17 (224)
T ss_pred CEEEEcCcCcccccch
Confidence 4799999999999853
No 177
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=74.38 E-value=2.2 Score=39.35 Aligned_cols=92 Identities=14% Similarity=0.044 Sum_probs=67.3
Q ss_pred EEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecC---CcccccccccCCCCCcE
Q 022087 168 YVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKV 243 (303)
Q Consensus 168 ~v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~---g~~~KDL~~Lgrdl~~v 243 (303)
+....|-+ ++|+++. +.+.|.|.|....++= .++..++-. .+|++.+..-.-...+ ..|.+-|.++|..++.+
T Consensus 112 ~~~~~~~~-~~lq~lR~~g~~l~iisN~d~r~~-~~l~~~~l~-~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee~ 188 (237)
T KOG3085|consen 112 WKYLDGMQ-ELLQKLRKKGTILGIISNFDDRLR-LLLLPLGLS-AYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEEC 188 (237)
T ss_pred ceeccHHH-HHHHHHHhCCeEEEEecCCcHHHH-HHhhccCHH-HhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHHe
Confidence 44455555 9999999 6789999999988877 777777776 5788877632222222 36788899999999999
Q ss_pred EEEECChhh-hccCCCceee
Q 022087 244 AIIDNSPQV-FRLQVNNGIP 262 (303)
Q Consensus 244 IIIDDs~~~-~~~~~~N~I~ 262 (303)
|.|||+... +....+-|+.
T Consensus 189 vhIgD~l~nD~~gA~~~G~~ 208 (237)
T KOG3085|consen 189 VHIGDLLENDYEGARNLGWH 208 (237)
T ss_pred EEecCccccccHhHHHcCCE
Confidence 999999987 6544433433
No 178
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=74.21 E-value=1.6 Score=37.79 Aligned_cols=15 Identities=33% Similarity=0.377 Sum_probs=13.2
Q ss_pred eEEEEecCccccccc
Q 022087 131 VTLVLDLDETLVHST 145 (303)
Q Consensus 131 ~tLVLDLDeTLvhs~ 145 (303)
+.++||+||||+++.
T Consensus 2 k~viFD~dgTLiD~~ 16 (198)
T TIGR01428 2 KALVFDVYGTLFDVH 16 (198)
T ss_pred cEEEEeCCCcCccHH
Confidence 378999999999975
No 179
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=73.88 E-value=4.9 Score=36.81 Aligned_cols=55 Identities=24% Similarity=0.230 Sum_probs=34.7
Q ss_pred CceEEEEecCcccc-cccccccCCCCceeEEEecceeeeEEEeeCchHHHHHH-HhhcceEEEEEcCCcHHHHHHHHHHh
Q 022087 129 KSVTLVLDLDETLV-HSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLE-RVAEMFEVVIFTASQSIYAAQLLDIL 206 (303)
Q Consensus 129 ~k~tLVLDLDeTLv-hs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~-~l~~~yEivIfTas~~~YA~~il~~L 206 (303)
++..|+.||||||+ ... .-+.-+.++|+ ......-+++-|..+..-+..++...
T Consensus 1 ~~~ll~sDlD~Tl~~~~~------------------------~~~~~l~~~l~~~~~~~~~~v~~TGRs~~~~~~~~~~~ 56 (247)
T PF05116_consen 1 PPRLLASDLDGTLIDGDD------------------------EALARLEELLEQQARPEILFVYVTGRSLESVLRLLREY 56 (247)
T ss_dssp -SEEEEEETBTTTBHCHH------------------------HHHHHHHHHHHHHHCCGEEEEEE-SS-HHHHHHHHHHC
T ss_pred CCEEEEEECCCCCcCCCH------------------------HHHHHHHHHHHHhhCCCceEEEECCCCHHHHHHHHHhC
Confidence 35789999999999 211 11344556666 33456777777887777777777754
Q ss_pred C
Q 022087 207 D 207 (303)
Q Consensus 207 D 207 (303)
.
T Consensus 57 ~ 57 (247)
T PF05116_consen 57 N 57 (247)
T ss_dssp T
T ss_pred C
Confidence 3
No 180
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=73.42 E-value=2 Score=36.93 Aligned_cols=16 Identities=31% Similarity=0.439 Sum_probs=13.4
Q ss_pred ceEEEEecCccccccc
Q 022087 130 SVTLVLDLDETLVHST 145 (303)
Q Consensus 130 k~tLVLDLDeTLvhs~ 145 (303)
.+++|||+||||+.+.
T Consensus 4 ~k~viFD~DGTLid~~ 19 (201)
T TIGR01491 4 IKLIIFDLDGTLTDVM 19 (201)
T ss_pred ceEEEEeCCCCCcCCc
Confidence 3589999999999853
No 181
>PRK09449 dUMP phosphatase; Provisional
Probab=72.91 E-value=1.8 Score=38.27 Aligned_cols=14 Identities=43% Similarity=0.520 Sum_probs=12.3
Q ss_pred eEEEEecCcccccc
Q 022087 131 VTLVLDLDETLVHS 144 (303)
Q Consensus 131 ~tLVLDLDeTLvhs 144 (303)
++++|||||||++.
T Consensus 4 k~iiFDlDGTLid~ 17 (224)
T PRK09449 4 DWILFDADETLFHF 17 (224)
T ss_pred cEEEEcCCCchhcc
Confidence 48999999999974
No 182
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=72.69 E-value=1.8 Score=37.98 Aligned_cols=15 Identities=47% Similarity=0.627 Sum_probs=13.3
Q ss_pred eEEEEecCccccccc
Q 022087 131 VTLVLDLDETLVHST 145 (303)
Q Consensus 131 ~tLVLDLDeTLvhs~ 145 (303)
..++||+||||+++.
T Consensus 7 ~~iiFD~DGTL~d~~ 21 (226)
T PRK13222 7 RAVAFDLDGTLVDSA 21 (226)
T ss_pred cEEEEcCCcccccCH
Confidence 489999999999885
No 183
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=72.56 E-value=6.1 Score=35.40 Aligned_cols=52 Identities=19% Similarity=0.147 Sum_probs=29.9
Q ss_pred EEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCC
Q 022087 133 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDP 208 (303)
Q Consensus 133 LVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~~~yEivIfTas~~~YA~~il~~LDp 208 (303)
+++||||||+++... +.|. .+-++...+...++|-|.-...-+..++..++.
T Consensus 2 i~~DlDgTLl~~~~~-----------------------~~~~-~~~~~~~~~gi~~viaTGR~~~~v~~~~~~l~l 53 (236)
T TIGR02471 2 IITDLDNTLLGDDEG-----------------------LASF-VELLRGSGDAVGFGIATGRSVESAKSRYAKLNL 53 (236)
T ss_pred eEEeccccccCCHHH-----------------------HHHH-HHHHHhcCCCceEEEEeCCCHHHHHHHHHhCCC
Confidence 688999999985321 0111 133443234455666666666666666666643
No 184
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=70.93 E-value=2.1 Score=35.22 Aligned_cols=14 Identities=43% Similarity=0.714 Sum_probs=12.1
Q ss_pred EEEecCcccccccc
Q 022087 133 LVLDLDETLVHSTL 146 (303)
Q Consensus 133 LVLDLDeTLvhs~~ 146 (303)
++||+||||+++..
T Consensus 1 iifD~dgtL~d~~~ 14 (176)
T PF13419_consen 1 IIFDLDGTLVDTDP 14 (176)
T ss_dssp EEEESBTTTEEHHH
T ss_pred cEEECCCCcEeCHH
Confidence 68999999999853
No 185
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=69.80 E-value=2 Score=36.12 Aligned_cols=14 Identities=36% Similarity=0.665 Sum_probs=12.4
Q ss_pred EEEecCcccccccc
Q 022087 133 LVLDLDETLVHSTL 146 (303)
Q Consensus 133 LVLDLDeTLvhs~~ 146 (303)
++|||||||+++..
T Consensus 2 vlFDlDgtLv~~~~ 15 (183)
T TIGR01509 2 ILFDLDGVLVDTSS 15 (183)
T ss_pred eeeccCCceechHH
Confidence 78999999999854
No 186
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=67.01 E-value=13 Score=32.19 Aligned_cols=62 Identities=18% Similarity=0.208 Sum_probs=40.1
Q ss_pred EEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHh
Q 022087 133 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDIL 206 (303)
Q Consensus 133 LVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~L 206 (303)
+|.|+|||+.-|-..- ...++ ... =+.+||+.++.+++. +.|.++=-|+-.-..|...-+.|
T Consensus 2 VvsDIDGTiT~SD~~G-----~i~~~----~G~---d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L 64 (157)
T PF08235_consen 2 VVSDIDGTITKSDVLG-----HILPI----LGK---DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWL 64 (157)
T ss_pred EEEeccCCcCccchhh-----hhhhc----cCc---hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHH
Confidence 6889999998773100 00000 011 167999999999999 56888877887766665544443
No 187
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=65.04 E-value=15 Score=33.84 Aligned_cols=49 Identities=18% Similarity=0.326 Sum_probs=41.1
Q ss_pred EeeCchHHHHHHHhh---cceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEe
Q 022087 169 VKQRPHLKTFLERVA---EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVY 218 (303)
Q Consensus 169 v~~RP~l~eFL~~l~---~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~ 218 (303)
+..-||..+|++.++ ..++++|-|-+..-|-+.+|+.-+-.. .|+..+.
T Consensus 70 ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~-~f~~I~T 121 (234)
T PF06888_consen 70 IPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRD-CFSEIFT 121 (234)
T ss_pred CCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCcc-ccceEEe
Confidence 788999999999994 479999999999999999999987664 4544443
No 188
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=64.45 E-value=7 Score=33.12 Aligned_cols=47 Identities=17% Similarity=0.260 Sum_probs=37.5
Q ss_pred eCchHH----HHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCC-CceeeeE
Q 022087 171 QRPHLK----TFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDG-KLISRRV 217 (303)
Q Consensus 171 ~RP~l~----eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~~-~~f~~rl 217 (303)
++|++. +||+++. +.++++|-|++...+++++++.+.-.. ..+..++
T Consensus 86 ~~~~~~~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~ 138 (192)
T PF12710_consen 86 LFPGFIPDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNEL 138 (192)
T ss_dssp HCTTCHTTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEE
T ss_pred cCcCchhhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEee
Confidence 357777 9999985 789999999999999999999887553 2344555
No 189
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=64.20 E-value=9.7 Score=35.92 Aligned_cols=88 Identities=14% Similarity=0.203 Sum_probs=51.1
Q ss_pred CceEEEEecCcccccccccccC----CCCce---eE-EEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHH
Q 022087 129 KSVTLVLDLDETLVHSTLEYCD----DADFT---FT-VFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYA 199 (303)
Q Consensus 129 ~k~tLVLDLDeTLvhs~~~~~~----~~d~~---~~-v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA 199 (303)
++-.+|||+|||++........ ...+. +. .+.... -..-=|++.+|++++. ..+.|++.|.-....-
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~----~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r 175 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKG----EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQ 175 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcc----cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHH
Confidence 4579999999999964321110 00110 00 000000 1234589999999997 6799999998887665
Q ss_pred HHHHHHhCCCCCc-eeeeEeec
Q 022087 200 AQLLDILDPDGKL-ISRRVYRE 220 (303)
Q Consensus 200 ~~il~~LDp~~~~-f~~rl~R~ 220 (303)
+.=++.|--.|-. .++.+.|+
T Consensus 176 ~aT~~NL~kaGy~~~~~LiLR~ 197 (275)
T TIGR01680 176 AVTEANLKKAGYHTWEKLILKD 197 (275)
T ss_pred HHHHHHHHHcCCCCcceeeecC
Confidence 5555566444510 13445564
No 190
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=62.45 E-value=11 Score=33.80 Aligned_cols=51 Identities=22% Similarity=0.173 Sum_probs=29.9
Q ss_pred EEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhcceE--EEEEcCCcHHHHHHH
Q 022087 134 VLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFE--VVIFTASQSIYAAQL 202 (303)
Q Consensus 134 VLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~~~yE--ivIfTas~~~YA~~i 202 (303)
.||.||||.-....+ .-...-|++.+.|++|++... ++|-|.-...-.+..
T Consensus 1 ~lDyDGTL~p~~~~p------------------~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~ 53 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDP------------------DAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERF 53 (235)
T ss_dssp EEE-TTTSS---S-G------------------GG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH
T ss_pred CcccCCccCCCCCCc------------------cccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHh
Confidence 489999998654322 124567999999999997766 888888776663333
No 191
>PLN02382 probable sucrose-phosphatase
Probab=61.52 E-value=21 Score=35.48 Aligned_cols=17 Identities=35% Similarity=0.530 Sum_probs=14.4
Q ss_pred CCceEEEEecCcccccc
Q 022087 128 RKSVTLVLDLDETLVHS 144 (303)
Q Consensus 128 ~~k~tLVLDLDeTLvhs 144 (303)
.+++.|+.||||||+.+
T Consensus 7 ~~~~lI~sDLDGTLL~~ 23 (413)
T PLN02382 7 SPRLMIVSDLDHTMVDH 23 (413)
T ss_pred CCCEEEEEcCCCcCcCC
Confidence 45788999999999965
No 192
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=59.38 E-value=5 Score=35.60 Aligned_cols=16 Identities=25% Similarity=0.515 Sum_probs=13.7
Q ss_pred ceEEEEecCccccccc
Q 022087 130 SVTLVLDLDETLVHST 145 (303)
Q Consensus 130 k~tLVLDLDeTLvhs~ 145 (303)
+.++++|+||||+.+.
T Consensus 3 ~~~vifDfDgTi~~~d 18 (219)
T PRK09552 3 SIQIFCDFDGTITNND 18 (219)
T ss_pred CcEEEEcCCCCCCcch
Confidence 4589999999999874
No 193
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=59.33 E-value=17 Score=39.59 Aligned_cols=59 Identities=17% Similarity=0.125 Sum_probs=36.6
Q ss_pred CCCceEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh--cceEEEEEcCCcHHHHHHHHH
Q 022087 127 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA--EMFEVVIFTASQSIYAAQLLD 204 (303)
Q Consensus 127 ~~~k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~--~~yEivIfTas~~~YA~~il~ 204 (303)
..++..++||+||||+..... -+..-|++.+-|++|. +...++|-|.-...-.+..+.
T Consensus 593 ~~~~rlI~LDyDGTLlp~~~~--------------------~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~ 652 (854)
T PLN02205 593 RTTTRAILLDYDGTLMPQASI--------------------DKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFS 652 (854)
T ss_pred hhcCeEEEEecCCcccCCccc--------------------cCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhC
Confidence 345678999999999954310 0122356777777764 346666666666655555554
Q ss_pred H
Q 022087 205 I 205 (303)
Q Consensus 205 ~ 205 (303)
.
T Consensus 653 ~ 653 (854)
T PLN02205 653 P 653 (854)
T ss_pred C
Confidence 3
No 194
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=58.57 E-value=19 Score=38.81 Aligned_cols=64 Identities=17% Similarity=0.156 Sum_probs=44.2
Q ss_pred CCCceEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhc--ceEEEEEcCCcHHHHHHHHH
Q 022087 127 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE--MFEVVIFTASQSIYAAQLLD 204 (303)
Q Consensus 127 ~~~k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~~--~yEivIfTas~~~YA~~il~ 204 (303)
..++..|+||.||||+.....+. ...-+..-|++.+-|+.|++ .-.|+|-|.-...-.+..+.
T Consensus 504 ~a~~rll~LDyDGTL~~~~~~~~---------------~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~ 568 (797)
T PLN03063 504 KSNNRLLILGFYGTLTEPRNSQI---------------KEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFG 568 (797)
T ss_pred hccCeEEEEecCccccCCCCCcc---------------ccccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhC
Confidence 44667889999999995422110 00124456889999999985 47888888877777777765
Q ss_pred H
Q 022087 205 I 205 (303)
Q Consensus 205 ~ 205 (303)
.
T Consensus 569 ~ 569 (797)
T PLN03063 569 E 569 (797)
T ss_pred C
Confidence 3
No 195
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=56.35 E-value=14 Score=34.37 Aligned_cols=98 Identities=18% Similarity=0.244 Sum_probs=56.0
Q ss_pred EEeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhC---CCCCceeeeEeeccceec---CC----ccccccccc
Q 022087 168 YVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILD---PDGKLISRRVYRESCIFS---DG----TYTKDLTVL 236 (303)
Q Consensus 168 ~v~~RP~l~eFL~~l~~-~yEivIfTas~~~YA~~il~~LD---p~~~~f~~rl~R~~c~~~---~g----~~~KDL~~L 236 (303)
.+.+|.|+.+|++.|.+ .--+.|||||...-.+.+++.-. |.=+.++..+.-+..... +| .|-|+-+.+
T Consensus 88 ~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~~l 167 (246)
T PF05822_consen 88 DIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNESAL 167 (246)
T ss_dssp ---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHHHH
T ss_pred chhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCcccc
Confidence 48899999999999995 58999999999999999999863 111234444443221111 11 244553333
Q ss_pred --------CCCCCcEEEEECChhhhcc-----CCCceeeecc
Q 022087 237 --------GVDLAKVAIIDNSPQVFRL-----QVNNGIPIES 265 (303)
Q Consensus 237 --------grdl~~vIIIDDs~~~~~~-----~~~N~I~I~~ 265 (303)
-..-.|||++=|+..-..+ ..+|.|.|.=
T Consensus 168 ~~~~~~~~~~~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGF 209 (246)
T PF05822_consen 168 EDSPYFKQLKKRTNVLLLGDSLGDLHMADGVPDEENVLKIGF 209 (246)
T ss_dssp TTHHHHHCTTT--EEEEEESSSGGGGTTTT-S--SEEEEEEE
T ss_pred cCchHHHHhccCCcEEEecCccCChHhhcCCCccccEEEEEe
Confidence 1355789999999976643 3356666643
No 196
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=55.93 E-value=6.4 Score=34.25 Aligned_cols=14 Identities=21% Similarity=0.437 Sum_probs=12.5
Q ss_pred EEEEecCccccccc
Q 022087 132 TLVLDLDETLVHST 145 (303)
Q Consensus 132 tLVLDLDeTLvhs~ 145 (303)
++||||||||++..
T Consensus 2 ~viFDldgvL~d~~ 15 (199)
T PRK09456 2 LYIFDLGNVIVDID 15 (199)
T ss_pred EEEEeCCCccccCc
Confidence 68999999999974
No 197
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=55.65 E-value=39 Score=29.12 Aligned_cols=65 Identities=26% Similarity=0.335 Sum_probs=34.9
Q ss_pred eCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecCCcccccccccCCCCCcEEEEECC
Q 022087 171 QRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNS 249 (303)
Q Consensus 171 ~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~g~~~KDL~~Lgrdl~~vIIIDDs 249 (303)
.|-.+.+||+.+. +.-.|++|-|+.+.- .+++.++..+.++ ..++|++
T Consensus 53 ~~~~l~~~L~~~~~~gk~I~~yGA~~kg~--tlln~~g~~~~~I-----------------------------~~vvD~n 101 (160)
T PF08484_consen 53 SKAELREFLEKLKAEGKRIAGYGAGAKGN--TLLNYFGLDNDLI-----------------------------DYVVDDN 101 (160)
T ss_dssp HHHHHHHHHHHHHHTT--EEEE---SHHH--HHHHHHT--TTTS-------------------------------EEES-
T ss_pred HHHHHHHHHHHHHHcCCEEEEECcchHHH--HHHHHhCCCccee-----------------------------EEEEeCC
Confidence 4566778888887 667799999987744 5677777655443 2356777
Q ss_pred hhhhc-cCCCceeeeccc
Q 022087 250 PQVFR-LQVNNGIPIESW 266 (303)
Q Consensus 250 ~~~~~-~~~~N~I~I~~f 266 (303)
|.... +-|..+|||.+-
T Consensus 102 p~K~G~~~PGt~ipI~~p 119 (160)
T PF08484_consen 102 PLKQGKYLPGTHIPIVSP 119 (160)
T ss_dssp GGGTTEE-TTT--EEEEG
T ss_pred hhhcCcccCCCCCeECCH
Confidence 76653 356667777665
No 198
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=54.93 E-value=6.7 Score=35.03 Aligned_cols=16 Identities=31% Similarity=0.436 Sum_probs=13.6
Q ss_pred ceEEEEecCccccccc
Q 022087 130 SVTLVLDLDETLVHST 145 (303)
Q Consensus 130 k~tLVLDLDeTLvhs~ 145 (303)
++..+||+||||++.-
T Consensus 5 ~~la~FDfDgTLt~~d 20 (210)
T TIGR01545 5 KRIIFFDLDGTLHQQD 20 (210)
T ss_pred CcEEEEcCCCCCccCc
Confidence 4578999999999873
No 199
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=54.63 E-value=7.2 Score=34.15 Aligned_cols=17 Identities=29% Similarity=0.395 Sum_probs=14.1
Q ss_pred ceEEEEecCcccccccc
Q 022087 130 SVTLVLDLDETLVHSTL 146 (303)
Q Consensus 130 k~tLVLDLDeTLvhs~~ 146 (303)
.+.++||+||||++...
T Consensus 4 ~k~i~FD~d~TL~d~~~ 20 (229)
T COG1011 4 IKAILFDLDGTLLDFDS 20 (229)
T ss_pred eeEEEEecCCcccccch
Confidence 46899999999999743
No 200
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=50.77 E-value=32 Score=37.90 Aligned_cols=71 Identities=15% Similarity=0.195 Sum_probs=48.1
Q ss_pred CCCceEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhc--ceEEEEEcCCcHHHHHHHHH
Q 022087 127 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE--MFEVVIFTASQSIYAAQLLD 204 (303)
Q Consensus 127 ~~~k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~~--~yEivIfTas~~~YA~~il~ 204 (303)
..++..|+||.||||+-....+......+ ....+..-|.+.+.|+.|++ ...|+|-|.-...-.+..+.
T Consensus 588 ~a~~RLlfLDyDGTLap~~~~P~~~~~~~---------~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg 658 (934)
T PLN03064 588 QSNNRLLILGFNATLTEPVDTPGRRGDQI---------KEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFG 658 (934)
T ss_pred hccceEEEEecCceeccCCCCcccccccc---------cccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhC
Confidence 44667899999999986543221111000 01124455889999999985 57899999998888888776
Q ss_pred Hh
Q 022087 205 IL 206 (303)
Q Consensus 205 ~L 206 (303)
.+
T Consensus 659 ~~ 660 (934)
T PLN03064 659 EF 660 (934)
T ss_pred CC
Confidence 54
No 201
>PRK10671 copA copper exporting ATPase; Provisional
Probab=45.22 E-value=22 Score=38.41 Aligned_cols=86 Identities=14% Similarity=0.142 Sum_probs=60.6
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecCCcccccccccCCCCCcEEEEE
Q 022087 169 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIID 247 (303)
Q Consensus 169 v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~g~~~KDL~~Lgrdl~~vIIID 247 (303)
-..||++.+.|+++. +.+.+++.|...+..|+.+++.++-.. +|....-. .+ .+-++.++...+++++|-
T Consensus 649 d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~-~~~~~~p~-----~K---~~~i~~l~~~~~~v~~vG 719 (834)
T PRK10671 649 DPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE-VIAGVLPD-----GK---AEAIKRLQSQGRQVAMVG 719 (834)
T ss_pred CcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE-EEeCCCHH-----HH---HHHHHHHhhcCCEEEEEe
Confidence 467999999999997 579999999999999999999998753 33321100 11 223334455567899999
Q ss_pred CChhhhccCCCceeee
Q 022087 248 NSPQVFRLQVNNGIPI 263 (303)
Q Consensus 248 Ds~~~~~~~~~N~I~I 263 (303)
|...-...-...++-|
T Consensus 720 Dg~nD~~al~~Agvgi 735 (834)
T PRK10671 720 DGINDAPALAQADVGI 735 (834)
T ss_pred CCHHHHHHHHhCCeeE
Confidence 9987665544445444
No 202
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=44.76 E-value=12 Score=31.65 Aligned_cols=13 Identities=38% Similarity=0.682 Sum_probs=11.4
Q ss_pred EEEecCccccccc
Q 022087 133 LVLDLDETLVHST 145 (303)
Q Consensus 133 LVLDLDeTLvhs~ 145 (303)
+++|+||||+...
T Consensus 1 v~fD~DGTL~~~~ 13 (192)
T PF12710_consen 1 VIFDFDGTLTDSD 13 (192)
T ss_dssp EEEESBTTTBSSH
T ss_pred eEEecCcCeecCC
Confidence 5899999999875
No 203
>cd06537 CIDE_N_B CIDE_N domain of CIDE-B proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45 and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=42.77 E-value=42 Score=25.89 Aligned_cols=16 Identities=50% Similarity=0.536 Sum_probs=13.9
Q ss_pred ceEEEEecCccccccc
Q 022087 130 SVTLVLDLDETLVHST 145 (303)
Q Consensus 130 k~tLVLDLDeTLvhs~ 145 (303)
..+|||+=|||.|.+.
T Consensus 39 ~~~lvLeeDGT~Vd~E 54 (81)
T cd06537 39 VLTLVLEEDGTAVDSE 54 (81)
T ss_pred ceEEEEecCCCEEccH
Confidence 3799999999999873
No 204
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=41.85 E-value=13 Score=32.13 Aligned_cols=13 Identities=31% Similarity=0.445 Sum_probs=11.2
Q ss_pred EEEecCccccccc
Q 022087 133 LVLDLDETLVHST 145 (303)
Q Consensus 133 LVLDLDeTLvhs~ 145 (303)
.+||+||||+...
T Consensus 2 a~FD~DgTL~~~~ 14 (202)
T TIGR01490 2 AFFDFDGTLTAKD 14 (202)
T ss_pred eEEccCCCCCCCc
Confidence 5899999999863
No 205
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=41.61 E-value=1.2e+02 Score=25.63 Aligned_cols=120 Identities=14% Similarity=0.098 Sum_probs=66.1
Q ss_pred CceEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCC-cHHHHHHHHHHh
Q 022087 129 KSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTAS-QSIYAAQLLDIL 206 (303)
Q Consensus 129 ~k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas-~~~YA~~il~~L 206 (303)
++...++|||-|+.-.-..-.-+..| -+++...+..+.-...=|....-|..|+ +.-++++-+.+ ...||.+.|+.+
T Consensus 4 ~p~~~~fdldytiwP~~vdthl~~pf-kP~k~~~g~~g~e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~f 82 (144)
T KOG4549|consen 4 KPEAMQFDLDYTIWPRLVDTHLDYPF-KPFKCECGSKGEEMIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETF 82 (144)
T ss_pred CCceeEEeccceeeeEEEEecccccc-cccccCcccCcceeeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHh
Confidence 34577788888775442111111111 0122222334445666688888999999 56899988877 579999999998
Q ss_pred CCCCCceeeeEeeccce---ecCC----cccccccc-cCCCCCcEEEEECChh
Q 022087 207 DPDGKLISRRVYRESCI---FSDG----TYTKDLTV-LGVDLAKVAIIDNSPQ 251 (303)
Q Consensus 207 Dp~~~~f~~rl~R~~c~---~~~g----~~~KDL~~-Lgrdl~~vIIIDDs~~ 251 (303)
.-... +.-+-..+.-. ..+| ++ |++.. -|...++..+.||...
T Consensus 83 kvk~~-Gvlkps~e~ft~~~~g~gsklghf-ke~~n~s~~~~k~~~~fdDesr 133 (144)
T KOG4549|consen 83 KVKQT-GVLKPSLEEFTFEAVGDGSKLGHF-KEFTNNSNSIEKNKQVFDDESR 133 (144)
T ss_pred ccCcc-cccchhhhcCceeeecCcccchhH-HHHhhccCcchhceeeeccccc
Confidence 64321 11111111110 1122 32 55532 2556677778887654
No 206
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=41.15 E-value=48 Score=32.94 Aligned_cols=57 Identities=18% Similarity=0.192 Sum_probs=36.0
Q ss_pred CCceEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cceEEEEEcCCc
Q 022087 128 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQ 195 (303)
Q Consensus 128 ~~k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~-~~yEivIfTas~ 195 (303)
...+..-||+|||||...... .+......+.+..++.... |+.+. +.|-++|||...
T Consensus 73 ~~~K~i~FD~dgtlI~t~sg~----------vf~~~~~dw~~l~~~vp~K-lktl~~~g~~l~iftnq~ 130 (422)
T KOG2134|consen 73 GGSKIIMFDYDGTLIDTKSGK----------VFPKGSMDWRILFPEVPSK-LKTLYQDGIKLFIFTNQN 130 (422)
T ss_pred CCcceEEEecCCceeecCCcc----------eeeccCccceeeccccchh-hhhhccCCeEEEEEeccc
Confidence 345678899999999985421 1112223355555555555 44454 789999999754
No 207
>cd06539 CIDE_N_A CIDE_N domain of CIDE-A proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45, and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, the CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=40.60 E-value=48 Score=25.41 Aligned_cols=16 Identities=50% Similarity=0.594 Sum_probs=13.9
Q ss_pred ceEEEEecCccccccc
Q 022087 130 SVTLVLDLDETLVHST 145 (303)
Q Consensus 130 k~tLVLDLDeTLvhs~ 145 (303)
..+|||+=|||-|.+.
T Consensus 40 ~~~lvL~eDGT~Vd~E 55 (78)
T cd06539 40 LVTLVLEEDGTVVDTE 55 (78)
T ss_pred CcEEEEeCCCCEEccH
Confidence 4799999999999773
No 208
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=40.47 E-value=27 Score=31.35 Aligned_cols=92 Identities=17% Similarity=0.229 Sum_probs=61.7
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHH----HHhCCCCCceeeeEeecccee-cCCcccccccccCCCCCc
Q 022087 169 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLL----DILDPDGKLISRRVYRESCIF-SDGTYTKDLTVLGVDLAK 242 (303)
Q Consensus 169 v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il----~~LDp~~~~f~~rl~R~~c~~-~~g~~~KDL~~Lgrdl~~ 242 (303)
-.+=|.+-+++++-. ....++|||+++-. |.+++ +..|.. .||+..+-...-.. ..+.|.|-+..+|.+++.
T Consensus 102 ahlypDav~~ik~wk~~g~~vyiYSSGSV~-AQkL~Fghs~agdL~-~lfsGyfDttiG~KrE~~SY~kIa~~iGl~p~e 179 (229)
T COG4229 102 AHLYPDAVQAIKRWKALGMRVYIYSSGSVK-AQKLFFGHSDAGDLN-SLFSGYFDTTIGKKRESQSYAKIAGDIGLPPAE 179 (229)
T ss_pred cccCHhHHHHHHHHHHcCCcEEEEcCCCch-hHHHhhcccccccHH-hhhcceeeccccccccchhHHHHHHhcCCCchh
Confidence 345688999998887 67899999999743 33322 223333 35665554322111 124789999999999999
Q ss_pred EEEEECChhhhccCCCceee
Q 022087 243 VAIIDNSPQVFRLQVNNGIP 262 (303)
Q Consensus 243 vIIIDDs~~~~~~~~~N~I~ 262 (303)
++++-|.+.......+-|+.
T Consensus 180 ilFLSDn~~EL~AA~~vGl~ 199 (229)
T COG4229 180 ILFLSDNPEELKAAAGVGLA 199 (229)
T ss_pred eEEecCCHHHHHHHHhcchh
Confidence 99999999877554444443
No 209
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=38.45 E-value=26 Score=35.74 Aligned_cols=23 Identities=30% Similarity=0.382 Sum_probs=19.0
Q ss_pred EEEEEcCCcHHHHHHHHHH-hCCC
Q 022087 187 EVVIFTASQSIYAAQLLDI-LDPD 209 (303)
Q Consensus 187 EivIfTas~~~YA~~il~~-LDp~ 209 (303)
+.+|-||+.+.|++++++. |+-+
T Consensus 124 ~~vvVSASp~~~Vepfa~~~LGid 147 (497)
T PLN02177 124 KRYIITASPRIMVEPFVKTFLGAD 147 (497)
T ss_pred CEEEEECCcHHHHHHHHHHcCCCC
Confidence 4599999999999999975 6544
No 210
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=37.69 E-value=55 Score=33.04 Aligned_cols=53 Identities=23% Similarity=0.392 Sum_probs=39.9
Q ss_pred eEEEeeCchHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHh-CC-------CCCceeeeEe
Q 022087 166 TVYVKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDIL-DP-------DGKLISRRVY 218 (303)
Q Consensus 166 ~~~v~~RP~l~eFL~~l~~~-yEivIfTas~~~YA~~il~~L-Dp-------~~~~f~~rl~ 218 (303)
.-||.+-|.+..+|+++.+. -.+.+-|.|.-.|++.+++.+ ++ +..||+-++.
T Consensus 179 ~kYi~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv 240 (448)
T PF05761_consen 179 EKYIHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIV 240 (448)
T ss_dssp CCCEE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEE
T ss_pred HHHccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEE
Confidence 35677899999999999965 489999999999999999966 44 5678877665
No 211
>cd06536 CIDE_N_ICAD CIDE_N domain of ICAD. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD (DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40 and ICAD/DFF45 during apoptosis. In normal cells, DFF exists in the nucleus as a heterodimer composed of CAD/DFF40 as a latent nuclease and its chaperone and inhibitor subunit ICAD/DFF45. Apoptotic activation of caspase-3 results in the cleavage of DFF45/ICAD and release of active DFF40/CAD nuclease.
Probab=37.40 E-value=57 Score=25.11 Aligned_cols=17 Identities=41% Similarity=0.536 Sum_probs=14.4
Q ss_pred CceEEEEecCccccccc
Q 022087 129 KSVTLVLDLDETLVHST 145 (303)
Q Consensus 129 ~k~tLVLDLDeTLvhs~ 145 (303)
...+|||+=|||.|.+.
T Consensus 41 ~~~~lvL~eDGT~VddE 57 (80)
T cd06536 41 APITLVLAEDGTIVEDE 57 (80)
T ss_pred CceEEEEecCCcEEccH
Confidence 45799999999999773
No 212
>smart00266 CAD Domains present in proteins implicated in post-mortem DNA fragmentation.
Probab=37.40 E-value=52 Score=24.96 Aligned_cols=16 Identities=50% Similarity=0.646 Sum_probs=13.9
Q ss_pred ceEEEEecCccccccc
Q 022087 130 SVTLVLDLDETLVHST 145 (303)
Q Consensus 130 k~tLVLDLDeTLvhs~ 145 (303)
..+|||+=|||.|.+.
T Consensus 38 ~~~l~L~eDGT~VddE 53 (74)
T smart00266 38 PVTLVLEEDGTIVDDE 53 (74)
T ss_pred CcEEEEecCCcEEccH
Confidence 5799999999999773
No 213
>TIGR02826 RNR_activ_nrdG3 anaerobic ribonucleoside-triphosphate reductase activating protein. Members of this family represent a set of proteins related to, yet architecturally different from, the activating protein for the glycine radical-containing, oxygen-sensitive ribonucleoside-triphosphate reductase (RNR) as described in model TIGR02491. Members of this family are found paired with members of a similarly divergent set of anaerobic ribonucleoside-triphosphate reductases. Identification of this protein as an RNR activitating protein is partly from pairing with a candidate RNR. It is further supported by our finding that upstream of these operons are examples of a conserved regulatory element (described Rodionov and Gelfand) that is found in nearly all bacteria and that occurs specifically upstream of operons for all three classes of RNR genes.
Probab=36.61 E-value=81 Score=26.67 Aligned_cols=71 Identities=23% Similarity=0.277 Sum_probs=45.1
Q ss_pred EEecceeeeEEEeeCchHHHHHHHhhc-ceEEEEEcCCcHH-HHHHHHHHhCCCCCceeeeEeeccceecCCcccccccc
Q 022087 158 VFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSI-YAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTV 235 (303)
Q Consensus 158 v~~~~~~~~~~v~~RP~l~eFL~~l~~-~yEivIfTas~~~-YA~~il~~LDp~~~~f~~rl~R~~c~~~~g~~~KDL~~ 235 (303)
+.+.+.+ ..++.+.++++.+.+ .+.+.|+|..... --+.+++.+|- ...|.|++++..
T Consensus 65 Vt~SGGE-----l~~~~l~~ll~~lk~~Gl~i~l~Tg~~~~~~~~~il~~iD~---------------l~~g~y~~~~~~ 124 (147)
T TIGR02826 65 VLFLGGE-----WNREALLSLLKIFKEKGLKTCLYTGLEPKDIPLELVQHLDY---------------LKTGRWIHTRGG 124 (147)
T ss_pred EEEechh-----cCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHhCCE---------------EEEChHHHHcCC
Confidence 4555555 367899999999985 5899999986542 23344444432 245566666655
Q ss_pred cCCCCCcEEEEEC
Q 022087 236 LGVDLAKVAIIDN 248 (303)
Q Consensus 236 Lgrdl~~vIIIDD 248 (303)
+++.-+|=.|+|-
T Consensus 125 ~~~~~sNQ~~~~~ 137 (147)
T TIGR02826 125 LGSPTTNQIFIDL 137 (147)
T ss_pred CCCCCcCceEEEC
Confidence 5554457777774
No 214
>cd06538 CIDE_N_FSP27 CIDE_N domain of FSP27 proteins. The CIDE-N (cell death-inducing DFF45-like effector, N-terminal) domain is found in the FSP27/CIDE-C protein, which has been identified as a n adipocyte lipid droplet protein that negatively regulates lipolysis and promotes triglyceride accumulation. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. The CIDE-N domain of FSP27 is sufficient to increase apoptosis in vitro when overexpressed.
Probab=36.22 E-value=54 Score=25.19 Aligned_cols=16 Identities=44% Similarity=0.401 Sum_probs=13.7
Q ss_pred ceEEEEecCccccccc
Q 022087 130 SVTLVLDLDETLVHST 145 (303)
Q Consensus 130 k~tLVLDLDeTLvhs~ 145 (303)
..+|||+-|||.|.+.
T Consensus 39 ~~~lvL~eDGT~Vd~E 54 (79)
T cd06538 39 ISSLVLDEDGTGVDTE 54 (79)
T ss_pred ccEEEEecCCcEEccH
Confidence 3799999999999773
No 215
>cd01615 CIDE_N CIDE_N domain, found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins, as well as CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of ICAD/DFF45, and the CAD/DFF40 and CIDE nucleases during apoptosis. The CIDE-N domain is also found in the FSP27/CIDE-C protein.
Probab=35.25 E-value=60 Score=24.86 Aligned_cols=17 Identities=47% Similarity=0.491 Sum_probs=14.3
Q ss_pred CceEEEEecCccccccc
Q 022087 129 KSVTLVLDLDETLVHST 145 (303)
Q Consensus 129 ~k~tLVLDLDeTLvhs~ 145 (303)
...+|||+-|||.|...
T Consensus 39 ~~~~lvL~eDGTeVddE 55 (78)
T cd01615 39 APVTLVLEEDGTEVDDE 55 (78)
T ss_pred CCeEEEEeCCCcEEccH
Confidence 45799999999999763
No 216
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=34.43 E-value=63 Score=29.49 Aligned_cols=58 Identities=19% Similarity=0.306 Sum_probs=37.0
Q ss_pred CCCceEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhcceEEEEEc-CCcHHHH----HH
Q 022087 127 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFT-ASQSIYA----AQ 201 (303)
Q Consensus 127 ~~~k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL~~l~~~yEivIfT-as~~~YA----~~ 201 (303)
+.++..+.+|.||||.-+. -+.-|-+.+||+.+.+...|.+-- +...... +.
T Consensus 8 r~~~~l~lfdvdgtLt~~r-----------------------~~~~~e~~~~l~~lr~~v~ig~VggsDl~k~~eqlG~~ 64 (252)
T KOG3189|consen 8 RDEETLCLFDVDGTLTPPR-----------------------QKVTPEMLEFLQKLRKKVTIGFVGGSDLSKQQEQLGDN 64 (252)
T ss_pred cCCceEEEEecCCcccccc-----------------------ccCCHHHHHHHHHHhhheEEEEeecHHHHHHHHHhchh
Confidence 3344556679999996542 345688999999999887766543 3333333 34
Q ss_pred HHHHhC
Q 022087 202 LLDILD 207 (303)
Q Consensus 202 il~~LD 207 (303)
|++..|
T Consensus 65 Vl~~fD 70 (252)
T KOG3189|consen 65 VLEEFD 70 (252)
T ss_pred HHhhhc
Confidence 455554
No 217
>PF02017 CIDE-N: CIDE-N domain; InterPro: IPR003508 This domain consists of caspase-activated (CAD) nucleases, which induce DNA fragmentation and chromatin condensation during apoptosis, and the cell death activator proteins CIDE-A and CIDE-B, which are inhibitors of CAD nuclease. The two proteins interact through the region defined by the method signatures.; GO: 0006915 apoptosis, 0005622 intracellular; PDB: 1IBX_A 2EEL_A 1F2R_I 1C9F_A 1D4B_A.
Probab=33.55 E-value=33 Score=26.25 Aligned_cols=17 Identities=41% Similarity=0.470 Sum_probs=14.2
Q ss_pred CceEEEEecCccccccc
Q 022087 129 KSVTLVLDLDETLVHST 145 (303)
Q Consensus 129 ~k~tLVLDLDeTLvhs~ 145 (303)
...+|||+-|||.|...
T Consensus 39 ~~~~lvL~eDGT~VddE 55 (78)
T PF02017_consen 39 EPVRLVLEEDGTEVDDE 55 (78)
T ss_dssp STCEEEETTTTCBESSC
T ss_pred cCcEEEEeCCCcEEccH
Confidence 45689999999999863
No 218
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=31.71 E-value=29 Score=30.08 Aligned_cols=16 Identities=19% Similarity=0.466 Sum_probs=12.2
Q ss_pred ceEEEEecCccccccc
Q 022087 130 SVTLVLDLDETLVHST 145 (303)
Q Consensus 130 k~tLVLDLDeTLvhs~ 145 (303)
|+.+.+|+||||.+..
T Consensus 2 ~i~I~iDiDgVLad~~ 17 (191)
T PF06941_consen 2 KIRIAIDIDGVLADFN 17 (191)
T ss_dssp -EEEEEESBTTTB-HH
T ss_pred CcEEEEECCCCCcccH
Confidence 4569999999999874
No 219
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=31.29 E-value=40 Score=30.20 Aligned_cols=125 Identities=21% Similarity=0.327 Sum_probs=69.9
Q ss_pred CCCCceEEEEecCcccccccccccCCCCceeEEEecceeeeEEEeeCchHHHHH------HHhhcceEEEEEcCCcHHHH
Q 022087 126 QGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFL------ERVAEMFEVVIFTASQSIYA 199 (303)
Q Consensus 126 ~~~~k~tLVLDLDeTLvhs~~~~~~~~d~~~~v~~~~~~~~~~v~~RP~l~eFL------~~l~~~yEivIfTas~~~YA 199 (303)
..+++.++-||+|.|++.|+.-- +.++ -+.-||-++|| +.+.+..+= -+-.++||
T Consensus 59 eG~~Pi~VsFDIDDTvLFsSp~F-----------~~Gk-----~~~sPgs~DyLknq~FW~~vn~g~D~---~SIPKevA 119 (237)
T COG3700 59 EGRPPIAVSFDIDDTVLFSSPGF-----------WRGK-----KYFSPGSEDYLKNQVFWEKVNNGWDE---FSIPKEVA 119 (237)
T ss_pred cCCCCeeEeeccCCeeEeccccc-----------ccCc-----cccCCChHHhhcCHHHHHHHhcCCcc---ccchHHHH
Confidence 35677899999999999986321 1111 23456666655 455543321 12378999
Q ss_pred HHHHHHhCCCCCceeeeEeeccceecCC---cccccccccCCCCCcEEEEECChhhhcc-----CCCceeeeccccCCCC
Q 022087 200 AQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVAIIDNSPQVFRL-----QVNNGIPIESWFDDPS 271 (303)
Q Consensus 200 ~~il~~LDp~~~~f~~rl~R~~c~~~~g---~~~KDL~~Lgrdl~~vIIIDDs~~~~~~-----~~~N~I~I~~f~~d~~ 271 (303)
.++++.--..|.-+=..-.|... ..++ ...|+... .++.-|++.-|.+.-.+. -.+|++.| +|||.+
T Consensus 120 ~qLI~MHq~RGD~i~FvTGRt~g-k~d~vsk~Lak~F~i--~~m~pv~f~Gdk~k~~qy~Kt~~i~~~~~~I--hYGDSD 194 (237)
T COG3700 120 RQLIDMHQRRGDAIYFVTGRTPG-KTDTVSKTLAKNFHI--TNMNPVIFAGDKPKPGQYTKTQWIQDKNIRI--HYGDSD 194 (237)
T ss_pred HHHHHHHHhcCCeEEEEecCCCC-cccccchhHHhhccc--CCCcceeeccCCCCcccccccHHHHhcCceE--EecCCc
Confidence 99999887666322111113322 1111 22333333 445557888888833322 24566666 677776
Q ss_pred chH
Q 022087 272 DCS 274 (303)
Q Consensus 272 D~e 274 (303)
+.-
T Consensus 195 ~Di 197 (237)
T COG3700 195 NDI 197 (237)
T ss_pred hhh
Confidence 543
No 220
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=31.26 E-value=29 Score=29.65 Aligned_cols=14 Identities=21% Similarity=0.368 Sum_probs=12.2
Q ss_pred EEEEecCccccccc
Q 022087 132 TLVLDLDETLVHST 145 (303)
Q Consensus 132 tLVLDLDeTLvhs~ 145 (303)
+++||.||||....
T Consensus 3 ~i~fDktGTLt~~~ 16 (215)
T PF00702_consen 3 AICFDKTGTLTQGK 16 (215)
T ss_dssp EEEEECCTTTBESH
T ss_pred EEEEecCCCcccCe
Confidence 78999999997764
No 221
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=28.86 E-value=35 Score=34.94 Aligned_cols=23 Identities=17% Similarity=0.258 Sum_probs=20.5
Q ss_pred EEEEEcCCcHHHHHHHHHH-hCCC
Q 022087 187 EVVIFTASQSIYAAQLLDI-LDPD 209 (303)
Q Consensus 187 EivIfTas~~~YA~~il~~-LDp~ 209 (303)
+++|-|++.+.|+++-++. +.-+
T Consensus 110 ~~vVVTAsPrvmVEpFake~LG~D 133 (498)
T PLN02499 110 KRVVVTRMPRVMVERFAKEHLRAD 133 (498)
T ss_pred eEEEEeCCHHHHHHHHHHHhcCCc
Confidence 9999999999999999987 6554
No 222
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=26.74 E-value=1.2e+02 Score=27.68 Aligned_cols=87 Identities=7% Similarity=0.128 Sum_probs=59.1
Q ss_pred EeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCC-CceeeeEeeccce-ec----------CC---ccccc
Q 022087 169 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDG-KLISRRVYRESCI-FS----------DG---TYTKD 232 (303)
Q Consensus 169 v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~~-~~f~~rl~R~~c~-~~----------~g---~~~KD 232 (303)
..+-||++++..+|. +...+++-|-+-+..+.+|.+.|+... ..+..++--+.-. +. .| .-++-
T Consensus 87 ~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i~~ 166 (227)
T KOG1615|consen 87 PTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVIAL 166 (227)
T ss_pred CccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHHHH
Confidence 456799999999998 679999999999999999999998653 2344443322111 10 01 11222
Q ss_pred ccccCCCCCcEEEEECChhhhccC
Q 022087 233 LTVLGVDLAKVAIIDNSPQVFRLQ 256 (303)
Q Consensus 233 L~~Lgrdl~~vIIIDDs~~~~~~~ 256 (303)
|+. +++-+.++.|-|-..-...-
T Consensus 167 lrk-~~~~~~~~mvGDGatDlea~ 189 (227)
T KOG1615|consen 167 LRK-NYNYKTIVMVGDGATDLEAM 189 (227)
T ss_pred HHh-CCChheeEEecCCccccccC
Confidence 333 77888889998877655443
No 223
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=25.16 E-value=25 Score=32.34 Aligned_cols=14 Identities=36% Similarity=0.643 Sum_probs=12.2
Q ss_pred EEEEecCccccccc
Q 022087 132 TLVLDLDETLVHST 145 (303)
Q Consensus 132 tLVLDLDeTLvhs~ 145 (303)
.+|||.|+||+...
T Consensus 2 LvvfDFD~TIvd~d 15 (234)
T PF06888_consen 2 LVVFDFDHTIVDQD 15 (234)
T ss_pred EEEEeCCCCccCCc
Confidence 68999999999864
No 224
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=24.66 E-value=84 Score=30.48 Aligned_cols=102 Identities=17% Similarity=0.179 Sum_probs=56.9
Q ss_pred EEEeeCc-hHHHHHHHhhc------ceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeecc---------cee-cCCcc
Q 022087 167 VYVKQRP-HLKTFLERVAE------MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRES---------CIF-SDGTY 229 (303)
Q Consensus 167 ~~v~~RP-~l~eFL~~l~~------~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~---------c~~-~~g~~ 229 (303)
+.++.|| ++..-|+.+.+ .++|+|+--+...-+..++....-.=+++.+.-.+.. |.. ...+|
T Consensus 6 v~ayNRp~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~~~~~v~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~ia~hy 85 (334)
T cd02514 6 VIACNRPDYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEEVADVAKSFGDGVTHIQHPPISIKNVNPPHKFQGYYRIARHY 85 (334)
T ss_pred EEecCCHHHHHHHHHHHHhccccCCCceEEEEeCCCchHHHHHHHhhccccEEEEcccccccccCcccccchhhHHHHHH
Confidence 4578899 79999999984 4899999888776555555444211012333211111 000 01123
Q ss_pred ccccccc--CCCCCcEEEEECChhhh------------cc-CCCceeeeccccC
Q 022087 230 TKDLTVL--GVDLAKVAIIDNSPQVF------------RL-QVNNGIPIESWFD 268 (303)
Q Consensus 230 ~KDL~~L--grdl~~vIIIDDs~~~~------------~~-~~~N~I~I~~f~~ 268 (303)
..-|+.+ ...-+.+||+||....- .+ +-.....|..|.+
T Consensus 86 k~aln~vF~~~~~~~vIILEDDl~~sPdFf~yf~~~l~~y~~D~~v~~ISa~Nd 139 (334)
T cd02514 86 KWALTQTFNLFGYSFVIILEDDLDIAPDFFSYFQATLPLLEEDPSLWCISAWND 139 (334)
T ss_pred HHHHHHHHHhcCCCEEEEECCCCccCHhHHHHHHHHHHHHhcCCCEEEEEeecc
Confidence 3334433 12468899999975422 11 2335777777854
No 225
>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=24.43 E-value=79 Score=29.58 Aligned_cols=73 Identities=21% Similarity=0.261 Sum_probs=48.6
Q ss_pred eEEEecceeeeEEEeeCchHHHHHHHhhc--ceEEEEEcCCc------HHHHHHHHHHhCCCCCceeeeEeeccceecCC
Q 022087 156 FTVFFNMKEHTVYVKQRPHLKTFLERVAE--MFEVVIFTASQ------SIYAAQLLDILDPDGKLISRRVYRESCIFSDG 227 (303)
Q Consensus 156 ~~v~~~~~~~~~~v~~RP~l~eFL~~l~~--~yEivIfTas~------~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~g 227 (303)
+.++-.+....-+++-+--++.|.--|.+ .+|-++-+++. ++-|+.|.+.+|-.|++. -+|...+|
T Consensus 199 ~~VwGsG~PlRqFiys~DLA~l~i~vlr~Y~~vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~l~------~DttK~DG 272 (315)
T KOG1431|consen 199 LTVWGSGSPLRQFIYSDDLADLFIWVLREYEGVEPIILSVGESDEVTIREAAEAVVEAVDFTGKLV------WDTTKSDG 272 (315)
T ss_pred EEEecCCChHHHHhhHhHHHHHHHHHHHhhcCccceEeccCccceeEHHHHHHHHHHHhCCCceEE------eeccCCCC
Confidence 33443333333345555566666666664 48888998887 789999999998877542 34667888
Q ss_pred ccccccc
Q 022087 228 TYTKDLT 234 (303)
Q Consensus 228 ~~~KDL~ 234 (303)
.+.|-.+
T Consensus 273 q~kKtas 279 (315)
T KOG1431|consen 273 QFKKTAS 279 (315)
T ss_pred Ccccccc
Confidence 8877653
No 226
>cd06535 CIDE_N_CAD CIDE_N domain of CAD nuclease. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of CAD/DFF40 and ICAD/DFF45 during apoptosis. In normal cells, DFF exists in the nucleus as a heterodimer composed of CAD/DFF40 as a latent nuclease and its chaperone and inhibitor subunit ICAD/DFF45. Apoptotic activation of caspase-3 results in the cleavage of DFF45/ICAD and the release of active DFF40/CAD nuclease.
Probab=21.26 E-value=1.3e+02 Score=22.96 Aligned_cols=13 Identities=38% Similarity=0.222 Sum_probs=11.6
Q ss_pred ceEEEEecCcccc
Q 022087 130 SVTLVLDLDETLV 142 (303)
Q Consensus 130 k~tLVLDLDeTLv 142 (303)
..+|||+-|||-|
T Consensus 40 ~~~l~L~eDGTeV 52 (77)
T cd06535 40 GSRLCLYEDGTEV 52 (77)
T ss_pred CcEEEEecCCcEe
Confidence 4689999999999
No 227
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=20.82 E-value=2.8e+02 Score=29.73 Aligned_cols=76 Identities=13% Similarity=0.026 Sum_probs=54.5
Q ss_pred EEEeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeeeEeeccceecCCcccccccccCCCCCcEEE
Q 022087 167 VYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAI 245 (303)
Q Consensus 167 ~~v~~RP~l~eFL~~l~-~~yEivIfTas~~~YA~~il~~LDp~~~~f~~rl~R~~c~~~~g~~~KDL~~Lgrdl~~vII 245 (303)
+.-..||++.+.++++. ..+++++.|...+..|..+.+.++-.. ++ +...-.+...++.|. .. .+|++
T Consensus 565 l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~~-~~------~~~p~~K~~~v~~l~---~~-~~v~m 633 (741)
T PRK11033 565 LQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGIDF-RA------GLLPEDKVKAVTELN---QH-APLAM 633 (741)
T ss_pred EecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCe-ec------CCCHHHHHHHHHHHh---cC-CCEEE
Confidence 34689999999999998 579999999999999999999998751 11 100112334455554 22 57999
Q ss_pred EECChhhh
Q 022087 246 IDNSPQVF 253 (303)
Q Consensus 246 IDDs~~~~ 253 (303)
|-|...-.
T Consensus 634 vGDgiNDa 641 (741)
T PRK11033 634 VGDGINDA 641 (741)
T ss_pred EECCHHhH
Confidence 98877544
Done!