Query 022088
Match_columns 303
No_of_seqs 162 out of 1504
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 13:50:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022088.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022088hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1pyf_A IOLS protein; beta-alph 100.0 1.5E-56 5.1E-61 405.1 25.5 258 11-286 38-311 (312)
2 3n6q_A YGHZ aldo-keto reductas 100.0 8.7E-56 3E-60 405.4 28.9 275 11-295 46-342 (346)
3 3eau_A Voltage-gated potassium 100.0 1.3E-55 4.3E-60 401.5 27.6 265 11-286 36-323 (327)
4 1pz1_A GSP69, general stress p 100.0 1.3E-55 4.6E-60 402.0 26.6 262 11-287 37-313 (333)
5 3erp_A Putative oxidoreductase 100.0 2.6E-55 9E-60 403.0 28.2 262 11-284 67-349 (353)
6 3n2t_A Putative oxidoreductase 100.0 2.1E-55 7.1E-60 403.0 25.5 257 11-287 55-332 (348)
7 1lqa_A TAS protein; TIM barrel 100.0 1E-54 3.4E-59 398.6 29.3 265 11-290 33-344 (346)
8 3lut_A Voltage-gated potassium 100.0 6.4E-55 2.2E-59 402.5 27.1 267 11-288 70-359 (367)
9 3v0s_A Perakine reductase; AKR 100.0 7.1E-56 2.4E-60 404.5 18.7 257 11-286 37-311 (337)
10 1gve_A Aflatoxin B1 aldehyde r 100.0 6.3E-54 2.1E-58 390.3 28.7 270 11-287 25-318 (327)
11 1ur3_M Hypothetical oxidoreduc 100.0 7.9E-54 2.7E-58 387.8 25.8 239 11-286 56-315 (319)
12 3up8_A Putative 2,5-diketo-D-g 100.0 4.2E-54 1.4E-58 385.4 22.4 228 11-287 50-283 (298)
13 2bp1_A Aflatoxin B1 aldehyde r 100.0 1.6E-53 5.3E-58 392.1 25.9 269 11-287 58-351 (360)
14 1ynp_A Oxidoreductase, AKR11C1 100.0 1.2E-53 4E-58 386.5 23.7 243 11-287 51-310 (317)
15 3f7j_A YVGN protein; aldo-keto 100.0 2.4E-53 8.3E-58 377.3 23.8 225 11-286 34-264 (276)
16 3o0k_A Aldo/keto reductase; ss 100.0 1.3E-53 4.6E-58 379.8 22.0 224 11-283 53-282 (283)
17 1hw6_A 2,5-diketo-D-gluconic a 100.0 3.4E-53 1.2E-57 376.7 23.8 229 11-286 30-264 (278)
18 4f40_A Prostaglandin F2-alpha 100.0 2.4E-53 8.3E-58 379.6 22.3 227 11-286 38-276 (288)
19 3b3e_A YVGN protein; aldo-keto 100.0 6.6E-53 2.3E-57 379.6 25.1 226 11-287 68-299 (310)
20 2wzm_A Aldo-keto reductase; ox 100.0 5.5E-53 1.9E-57 376.0 22.8 228 11-287 38-271 (283)
21 1vbj_A Prostaglandin F synthas 100.0 1.5E-52 5.1E-57 372.9 25.4 226 11-287 37-268 (281)
22 1qwk_A Aldose reductase, aldo- 100.0 1.3E-52 4.6E-57 379.8 22.5 248 11-288 32-297 (317)
23 3buv_A 3-OXO-5-beta-steroid 4- 100.0 3.6E-52 1.2E-56 378.4 25.3 241 11-288 38-307 (326)
24 3o3r_A Aldo-keto reductase fam 100.0 3.8E-52 1.3E-56 376.7 25.2 241 11-289 29-298 (316)
25 1afs_A 3-alpha-HSD, 3-alpha-hy 100.0 2.9E-52 9.9E-57 378.5 23.8 241 11-288 35-304 (323)
26 3ln3_A Dihydrodiol dehydrogena 100.0 5E-52 1.7E-56 377.3 25.0 241 11-288 36-305 (324)
27 1s1p_A Aldo-keto reductase fam 100.0 8.4E-52 2.9E-56 376.6 25.9 240 11-287 35-303 (331)
28 1us0_A Aldose reductase; oxido 100.0 7.8E-52 2.7E-56 374.7 25.4 239 11-287 29-296 (316)
29 1vp5_A 2,5-diketo-D-gluconic a 100.0 4.1E-52 1.4E-56 372.5 22.3 228 11-287 42-278 (298)
30 4gie_A Prostaglandin F synthas 100.0 4.4E-52 1.5E-56 371.7 22.4 228 11-286 41-274 (290)
31 1mzr_A 2,5-diketo-D-gluconate 100.0 8.7E-52 3E-56 370.0 23.8 228 11-287 52-285 (296)
32 1mi3_A Xylose reductase, XR; a 100.0 1.8E-51 6E-56 373.3 24.3 242 11-286 32-306 (322)
33 1zgd_A Chalcone reductase; pol 100.0 1E-51 3.6E-56 373.1 22.6 234 11-286 38-295 (312)
34 3krb_A Aldose reductase; ssgci 100.0 1.7E-51 5.7E-56 374.9 23.9 241 11-287 41-317 (334)
35 3h7u_A Aldo-keto reductase; st 100.0 4.4E-51 1.5E-55 372.1 23.8 235 11-286 52-308 (335)
36 3h7r_A Aldo-keto reductase; st 100.0 2.5E-51 8.5E-56 373.1 21.2 236 10-286 47-304 (331)
37 2bgs_A Aldose reductase; holoe 100.0 1.2E-50 4.1E-55 369.9 23.8 231 11-287 63-316 (344)
38 3b3d_A YTBE protein, putative 100.0 6.7E-51 2.3E-55 367.8 21.8 226 11-286 68-302 (314)
39 4gac_A Alcohol dehydrogenase [ 100.0 7.7E-51 2.6E-55 369.6 22.2 240 11-288 29-296 (324)
40 4exb_A Putative uncharacterize 100.0 6.7E-50 2.3E-54 357.6 16.3 205 11-275 73-292 (292)
41 3cf4_A Acetyl-COA decarboxylas 98.3 3.7E-07 1.3E-11 91.1 3.6 96 69-172 231-347 (807)
42 1wv2_A Thiazole moeity, thiazo 88.9 7.9 0.00027 32.9 12.3 75 57-132 81-156 (265)
43 1ydn_A Hydroxymethylglutaryl-C 84.5 2.7 9.3E-05 36.4 7.5 108 60-170 23-142 (295)
44 2ftp_A Hydroxymethylglutaryl-C 76.0 28 0.00096 30.0 11.1 107 59-168 26-144 (302)
45 1ydo_A HMG-COA lyase; TIM-barr 71.9 46 0.0016 28.8 11.5 106 60-168 25-142 (307)
46 2pgw_A Muconate cycloisomerase 71.0 37 0.0013 30.2 11.0 142 12-172 153-303 (384)
47 4djd_D C/Fe-SP, corrinoid/iron 70.5 20 0.00069 31.4 8.7 99 65-169 82-188 (323)
48 2rdx_A Mandelate racemase/muco 70.2 36 0.0012 30.3 10.7 141 12-173 151-300 (379)
49 2p0o_A Hypothetical protein DU 67.8 68 0.0023 28.7 12.5 150 71-266 73-236 (372)
50 1nvm_A HOA, 4-hydroxy-2-oxoval 64.7 18 0.00062 31.9 7.4 105 59-167 26-139 (345)
51 2cw6_A Hydroxymethylglutaryl-C 64.1 68 0.0023 27.4 11.4 108 59-169 23-142 (298)
52 1kko_A 3-methylaspartate ammon 60.7 96 0.0033 27.9 12.2 106 60-170 249-361 (413)
53 1ub3_A Aldolase protein; schif 59.9 30 0.001 28.4 7.5 93 12-109 23-115 (220)
54 3gd6_A Muconate cycloisomerase 56.7 51 0.0017 29.5 9.1 104 59-173 197-301 (391)
55 1wa3_A 2-keto-3-deoxy-6-phosph 54.4 59 0.002 25.8 8.3 89 61-166 20-109 (205)
56 1vp8_A Hypothetical protein AF 54.3 84 0.0029 25.3 9.4 77 96-173 28-110 (201)
57 2nql_A AGR_PAT_674P, isomerase 53.6 27 0.00092 31.2 6.7 142 13-173 171-321 (388)
58 3eez_A Putative mandelate race 53.1 1.1E+02 0.0037 27.1 10.6 140 13-173 152-300 (378)
59 2qgy_A Enolase from the enviro 50.0 58 0.002 29.0 8.3 99 59-169 204-304 (391)
60 1nu5_A Chloromuconate cycloiso 49.4 33 0.0011 30.4 6.5 103 59-173 198-302 (370)
61 3k13_A 5-methyltetrahydrofolat 48.8 1.1E+02 0.0038 26.3 9.5 105 61-173 35-145 (300)
62 1mdl_A Mandelate racemase; iso 48.8 54 0.0018 28.8 7.8 138 13-168 151-298 (359)
63 1uwk_A Urocanate hydratase; hy 48.3 43 0.0015 31.1 6.9 118 10-142 114-267 (557)
64 3ngj_A Deoxyribose-phosphate a 47.4 48 0.0016 27.7 6.7 69 12-84 47-115 (239)
65 1vcv_A Probable deoxyribose-ph 47.1 58 0.002 26.9 7.1 90 12-109 21-110 (226)
66 2xvc_A ESCRT-III, SSO0910; cel 46.9 13 0.00044 23.6 2.3 18 96-113 39-56 (59)
67 3qy7_A Tyrosine-protein phosph 46.7 77 0.0026 26.6 8.1 82 82-168 103-193 (262)
68 2og9_A Mandelate racemase/muco 46.5 48 0.0016 29.6 7.2 100 59-170 217-318 (393)
69 3ik4_A Mandelate racemase/muco 46.4 64 0.0022 28.5 7.9 87 80-173 214-302 (365)
70 1x87_A Urocanase protein; stru 45.8 43 0.0015 31.1 6.5 85 43-142 160-262 (551)
71 2zad_A Muconate cycloisomerase 45.7 44 0.0015 29.2 6.7 104 59-173 192-297 (345)
72 3u9i_A Mandelate racemase/muco 45.7 70 0.0024 28.7 8.1 88 79-173 243-332 (393)
73 3s5s_A Mandelate racemase/muco 45.6 62 0.0021 28.9 7.7 88 79-173 214-303 (389)
74 2qde_A Mandelate racemase/muco 44.3 42 0.0015 30.0 6.4 103 59-173 199-303 (397)
75 2fkn_A Urocanate hydratase; ro 43.8 43 0.0015 31.1 6.2 118 10-142 110-263 (552)
76 2p8b_A Mandelate racemase/muco 43.4 35 0.0012 30.1 5.7 142 12-172 147-299 (369)
77 3q45_A Mandelate racemase/muco 42.5 41 0.0014 29.8 6.0 103 59-173 194-298 (368)
78 1tkk_A Similar to chloromucona 42.5 35 0.0012 30.1 5.5 104 59-172 195-300 (366)
79 3fst_A 5,10-methylenetetrahydr 42.3 1.4E+02 0.0048 25.7 9.2 105 59-174 93-211 (304)
80 1f6y_A 5-methyltetrahydrofolat 42.2 1.5E+02 0.0052 24.8 12.9 100 61-169 23-124 (262)
81 1eye_A DHPS 1, dihydropteroate 41.7 1.6E+02 0.0056 25.0 11.7 102 60-169 26-132 (280)
82 2ph5_A Homospermidine synthase 41.5 8.7 0.0003 35.7 1.3 20 9-28 95-114 (480)
83 2pp0_A L-talarate/galactarate 41.1 64 0.0022 28.9 7.1 99 59-169 230-330 (398)
84 2ovl_A Putative racemase; stru 40.9 1.6E+02 0.0055 25.8 9.7 139 13-170 153-302 (371)
85 3ihk_A Thiamin pyrophosphokina 40.7 1.5E+02 0.005 24.1 8.7 40 230-269 73-113 (218)
86 3ijw_A Aminoglycoside N3-acety 40.7 36 0.0012 29.0 5.0 53 66-118 17-74 (268)
87 1sjd_A N-acylamino acid racema 40.4 37 0.0013 30.0 5.4 100 59-171 193-294 (368)
88 1r0m_A N-acylamino acid racema 39.5 34 0.0012 30.3 5.0 99 59-170 199-299 (375)
89 2poz_A Putative dehydratase; o 39.4 54 0.0018 29.2 6.3 100 59-170 209-310 (392)
90 3p6l_A Sugar phosphate isomera 39.4 1.4E+02 0.0047 24.3 8.6 35 46-87 11-45 (262)
91 3r12_A Deoxyribose-phosphate a 39.2 1.1E+02 0.0037 25.9 7.6 93 12-109 63-155 (260)
92 3dg3_A Muconate cycloisomerase 39.1 37 0.0013 30.1 5.1 102 59-173 195-298 (367)
93 2lr8_A CAsp8-associated protei 45.1 6.4 0.00022 26.0 0.0 26 145-170 17-42 (70)
94 3i4k_A Muconate lactonizing en 38.8 49 0.0017 29.5 5.9 103 59-173 204-308 (383)
95 2htm_A Thiazole biosynthesis p 38.6 1.8E+02 0.0062 24.6 13.1 74 57-132 71-145 (268)
96 2nyg_A YOKD protein; PFAM02522 38.5 44 0.0015 28.5 5.2 50 66-115 15-69 (273)
97 4ggi_A UDP-2,3-diacylglucosami 38.0 58 0.002 27.8 6.0 47 122-170 234-280 (283)
98 3mel_A Thiamin pyrophosphokina 37.7 1.6E+02 0.0056 23.9 8.7 40 230-269 77-117 (222)
99 1z41_A YQJM, probable NADH-dep 37.6 2E+02 0.0069 24.9 10.3 91 47-140 210-306 (338)
100 4dwd_A Mandelate racemase/muco 37.3 67 0.0023 28.8 6.6 98 59-169 201-300 (393)
101 1y7y_A C.AHDI; helix-turn-heli 37.3 20 0.00069 22.9 2.4 25 216-240 13-37 (74)
102 3mwc_A Mandelate racemase/muco 37.0 53 0.0018 29.5 5.9 101 59-172 215-317 (400)
103 2ewt_A BLDD, putative DNA-bind 37.0 21 0.00072 22.7 2.4 23 217-239 9-31 (71)
104 3bjs_A Mandelate racemase/muco 36.9 64 0.0022 29.2 6.5 97 59-167 239-338 (428)
105 1v5x_A PRA isomerase, phosphor 36.5 74 0.0025 25.7 6.1 74 61-143 10-84 (203)
106 2o56_A Putative mandelate race 35.9 1E+02 0.0035 27.5 7.6 110 46-170 215-326 (407)
107 3lab_A Putative KDPG (2-keto-3 35.8 86 0.0029 25.7 6.4 81 69-166 30-117 (217)
108 3ec1_A YQEH GTPase; atnos1, at 35.6 2E+02 0.0068 25.2 9.4 82 46-129 101-182 (369)
109 4f3h_A Fimxeal, putative uncha 35.2 72 0.0025 26.1 6.1 115 46-167 94-219 (250)
110 2qq6_A Mandelate racemase/muco 35.2 65 0.0022 28.9 6.2 100 59-170 220-321 (410)
111 3oa3_A Aldolase; structural ge 35.0 1.2E+02 0.0042 25.9 7.5 93 12-109 78-170 (288)
112 3dxi_A Putative aldolase; TIM 34.8 2.2E+02 0.0077 24.6 9.7 107 60-167 21-133 (320)
113 3v7e_A Ribosome-associated pro 34.3 76 0.0026 21.4 5.0 57 103-168 3-60 (82)
114 2gl5_A Putative dehydratase pr 33.7 77 0.0026 28.4 6.4 99 59-169 228-328 (410)
115 2yci_X 5-methyltetrahydrofolat 33.6 2.2E+02 0.0074 24.0 13.5 102 61-173 32-137 (271)
116 3ta6_A Triosephosphate isomera 33.3 71 0.0024 27.1 5.6 46 228-273 215-261 (267)
117 3s83_A Ggdef family protein; s 33.3 81 0.0028 25.9 6.1 115 46-167 90-215 (259)
118 3p3b_A Mandelate racemase/muco 33.1 52 0.0018 29.4 5.1 95 59-167 211-311 (392)
119 2oz8_A MLL7089 protein; struct 33.0 1.6E+02 0.0055 26.0 8.4 136 13-167 152-296 (389)
120 3jva_A Dipeptide epimerase; en 32.8 2.2E+02 0.0075 24.8 9.2 84 81-170 209-294 (354)
121 4h1z_A Enolase Q92ZS5; dehydra 32.7 1.4E+02 0.0047 26.8 7.9 88 81-174 258-346 (412)
122 3sma_A FRBF; N-acetyl transfer 32.7 72 0.0025 27.4 5.6 54 65-118 23-81 (286)
123 2zc8_A N-acylamino acid racema 32.5 40 0.0014 29.7 4.2 99 59-170 192-292 (369)
124 1nsj_A PRAI, phosphoribosyl an 32.4 72 0.0025 25.8 5.4 73 61-142 11-84 (205)
125 3l9c_A 3-dehydroquinate dehydr 32.2 2.2E+02 0.0076 23.8 9.3 26 59-84 105-130 (259)
126 3lqv_P Splicing factor 3B subu 32.1 51 0.0017 19.1 3.1 24 257-280 3-31 (39)
127 2hxt_A L-fuconate dehydratase; 32.1 1.2E+02 0.004 27.5 7.4 97 59-167 252-351 (441)
128 3kz3_A Repressor protein CI; f 31.9 54 0.0018 21.4 3.9 53 218-270 14-66 (80)
129 2ox4_A Putative mandelate race 31.8 65 0.0022 28.8 5.5 110 46-170 209-320 (403)
130 3r0u_A Enzyme of enolase super 31.7 1.5E+02 0.005 26.3 7.8 87 81-173 214-302 (379)
131 3ndo_A Deoxyribose-phosphate a 31.5 1.2E+02 0.0043 25.0 6.7 92 12-109 33-124 (231)
132 4fb5_A Probable oxidoreductase 31.3 37 0.0013 29.8 3.8 70 219-290 68-147 (393)
133 4hv0_A AVTR; ribbon-helix-heli 30.9 71 0.0024 22.7 4.3 26 216-241 8-33 (106)
134 2hzg_A Mandelate racemase/muco 30.8 76 0.0026 28.3 5.8 107 46-167 193-304 (401)
135 3fv9_G Mandelate racemase/muco 30.6 1.6E+02 0.0054 26.2 7.9 92 72-173 213-306 (386)
136 3vnd_A TSA, tryptophan synthas 30.4 1.6E+02 0.0056 24.7 7.5 30 237-267 198-227 (267)
137 2c4w_A 3-dehydroquinate dehydr 30.3 1.1E+02 0.0036 24.2 5.7 82 58-148 32-118 (176)
138 4e38_A Keto-hydroxyglutarate-a 30.3 1.4E+02 0.0048 24.6 6.9 56 101-166 74-132 (232)
139 3ngf_A AP endonuclease, family 30.2 1.9E+02 0.0067 23.5 8.1 18 151-168 96-113 (269)
140 1t57_A Conserved protein MTH16 30.2 1.5E+02 0.005 24.0 6.6 87 83-173 25-117 (206)
141 3b7h_A Prophage LP1 protein 11 30.2 25 0.00086 22.7 1.9 23 218-240 9-31 (78)
142 2r6o_A Putative diguanylate cy 30.2 58 0.002 27.8 4.7 115 46-168 114-240 (294)
143 3my9_A Muconate cycloisomerase 29.8 71 0.0024 28.3 5.4 73 100-173 231-305 (377)
144 4had_A Probable oxidoreductase 29.8 34 0.0012 29.8 3.2 69 219-289 60-138 (350)
145 2a6c_A Helix-turn-helix motif; 29.7 41 0.0014 22.3 3.0 27 216-242 18-44 (83)
146 2dqw_A Dihydropteroate synthas 29.7 2.5E+02 0.0087 24.0 8.6 88 73-168 61-153 (294)
147 2nx9_A Oxaloacetate decarboxyl 29.6 2.9E+02 0.0099 25.3 9.6 93 71-168 37-147 (464)
148 1i60_A IOLI protein; beta barr 29.5 2E+02 0.0069 23.3 8.0 18 151-168 87-104 (278)
149 2r1j_L Repressor protein C2; p 29.4 19 0.00066 22.5 1.2 22 219-240 8-29 (68)
150 1k77_A EC1530, hypothetical pr 29.3 1.4E+02 0.0049 24.0 7.0 18 151-168 88-105 (260)
151 1tx2_A DHPS, dihydropteroate s 29.2 2.7E+02 0.0093 23.8 9.7 100 62-169 62-167 (297)
152 3rfa_A Ribosomal RNA large sub 29.1 2.9E+02 0.0099 24.8 9.3 89 84-172 232-349 (404)
153 1chr_A Chloromuconate cycloiso 29.1 2.7E+02 0.0091 24.3 9.1 86 82-173 215-302 (370)
154 2h9a_B CO dehydrogenase/acetyl 29.0 2.8E+02 0.0095 23.9 9.3 88 75-169 85-181 (310)
155 3obe_A Sugar phosphate isomera 29.0 2.5E+02 0.0084 23.6 8.6 17 151-167 117-133 (305)
156 3i6e_A Muconate cycloisomerase 29.0 77 0.0026 28.2 5.5 102 60-173 203-306 (385)
157 3s8q_A R-M controller protein; 28.9 56 0.0019 21.3 3.6 55 216-270 11-65 (82)
158 2chr_A Chloromuconate cycloiso 28.9 90 0.0031 27.4 5.9 73 100-173 228-302 (370)
159 3l8m_A Probable thiamine pyrop 28.8 78 0.0027 25.7 5.0 41 229-269 74-114 (212)
160 1ug2_A 2610100B20RIK gene prod 28.6 68 0.0023 22.4 3.8 15 147-161 38-52 (95)
161 3g5g_A Regulatory protein; tra 28.3 56 0.0019 22.7 3.6 57 214-270 26-82 (99)
162 3ks6_A Glycerophosphoryl diest 28.0 1.2E+02 0.0042 24.9 6.3 18 151-168 194-211 (250)
163 3hgj_A Chromate reductase; TIM 27.9 3E+02 0.01 23.9 10.3 14 14-27 158-171 (349)
164 1icp_A OPR1, 12-oxophytodienoa 27.9 2.7E+02 0.0093 24.5 8.9 71 67-141 259-330 (376)
165 1rvk_A Isomerase/lactonizing e 27.7 1.7E+02 0.0057 25.7 7.5 98 59-168 210-310 (382)
166 3apt_A Methylenetetrahydrofola 27.2 3E+02 0.01 23.6 13.4 107 59-175 82-209 (310)
167 2w6k_A COBE; biosynthetic prot 26.8 1E+02 0.0035 23.4 5.1 50 120-169 22-76 (145)
168 1wuf_A Hypothetical protein LI 26.8 1.3E+02 0.0046 26.6 6.7 87 81-173 227-315 (393)
169 3ddm_A Putative mandelate race 26.4 2.3E+02 0.0079 25.1 8.2 99 59-168 209-309 (392)
170 1kcz_A Beta-methylaspartase; b 25.6 2.6E+02 0.009 24.9 8.5 71 97-168 282-359 (413)
171 3mz2_A Glycerophosphoryl diest 25.5 1.5E+02 0.0051 25.2 6.5 66 104-169 149-236 (292)
172 2b5a_A C.BCLI; helix-turn-heli 25.5 33 0.0011 22.0 1.8 53 217-269 11-63 (77)
173 2uyg_A 3-dehydroquinate dehydr 25.4 1.4E+02 0.0049 22.8 5.5 82 58-148 22-106 (149)
174 3lmz_A Putative sugar isomeras 25.4 2.7E+02 0.0091 22.5 8.5 90 71-170 37-134 (257)
175 1y14_A B32, RPB4, DNA-directed 25.2 2.6E+02 0.0088 22.2 7.3 58 220-289 128-185 (187)
176 3h2y_A GTPase family protein; 25.2 3.4E+02 0.012 23.7 10.2 82 46-129 99-180 (368)
177 2ztj_A Homocitrate synthase; ( 25.1 3.6E+02 0.012 23.8 9.8 99 59-165 21-133 (382)
178 1ps9_A 2,4-dienoyl-COA reducta 25.0 3.5E+02 0.012 25.7 9.7 84 46-131 208-301 (671)
179 1adr_A P22 C2 repressor; trans 25.0 29 0.00098 22.3 1.4 51 219-269 8-58 (76)
180 2gwg_A 4-oxalomesaconate hydra 24.9 3.2E+02 0.011 23.3 9.4 109 60-169 41-180 (350)
181 3ri6_A O-acetylhomoserine sulf 24.7 3.4E+02 0.012 24.2 9.1 63 113-175 148-211 (430)
182 2cpg_A REPA protein, transcrip 24.6 1E+02 0.0036 17.5 4.2 23 216-238 12-34 (45)
183 2q5c_A NTRC family transcripti 24.3 93 0.0032 24.8 4.7 66 96-167 80-148 (196)
184 2akz_A Gamma enolase, neural; 23.9 4E+02 0.014 24.0 11.3 96 60-166 270-368 (439)
185 3k94_A Thiamin pyrophosphokina 23.6 1.1E+02 0.0037 25.1 5.0 40 229-268 77-116 (223)
186 4gqa_A NAD binding oxidoreduct 23.5 71 0.0024 28.5 4.2 69 219-289 70-148 (412)
187 2k9i_A Plasmid PRN1, complete 23.0 1.3E+02 0.0044 17.9 4.3 24 216-239 19-42 (55)
188 3tj4_A Mandelate racemase; eno 23.0 3.8E+02 0.013 23.4 9.1 82 81-168 223-306 (372)
189 2kpj_A SOS-response transcript 22.9 42 0.0014 22.9 2.0 53 217-269 10-62 (94)
190 3rjz_A N-type ATP pyrophosphat 22.8 2.1E+02 0.0072 23.6 6.7 94 68-174 54-152 (237)
191 3guv_A Site-specific recombina 22.8 89 0.003 23.9 4.2 30 81-110 76-105 (167)
192 3stp_A Galactonate dehydratase 22.7 1.5E+02 0.0052 26.6 6.3 98 59-168 240-339 (412)
193 3fcp_A L-Ala-D/L-Glu epimerase 22.7 1.4E+02 0.005 26.3 6.1 73 100-173 233-307 (381)
194 3f6w_A XRE-family like protein 22.6 45 0.0015 21.9 2.1 54 216-269 14-67 (83)
195 3cqj_A L-ribulose-5-phosphate 22.6 3.2E+02 0.011 22.4 9.1 18 151-168 111-128 (295)
196 3l12_A Putative glycerophospho 22.4 2.1E+02 0.0073 24.3 7.0 34 98-131 165-199 (313)
197 1q7z_A 5-methyltetrahydrofolat 22.4 3.3E+02 0.011 25.6 8.8 145 13-169 257-439 (566)
198 1n7k_A Deoxyribose-phosphate a 22.2 89 0.0031 25.9 4.2 70 12-85 40-109 (234)
199 3v5c_A Mandelate racemase/muco 22.2 1E+02 0.0035 27.5 5.0 80 80-169 226-313 (392)
200 3eeg_A 2-isopropylmalate synth 22.1 3.8E+02 0.013 23.1 9.9 97 66-169 30-143 (325)
201 2c35_A Human RPB4, DNA-directe 21.9 2.7E+02 0.0091 21.2 7.6 60 219-290 91-150 (152)
202 3t76_A VANU, transcriptional r 21.6 38 0.0013 23.2 1.6 21 219-239 27-47 (88)
203 3lmz_A Putative sugar isomeras 21.6 3.2E+02 0.011 22.0 8.9 52 59-117 57-108 (257)
204 3lm8_A Thiamine pyrophosphokin 21.6 96 0.0033 25.3 4.3 40 229-268 78-117 (222)
205 2keb_A DNA polymerase subunit 21.5 2E+02 0.0069 20.3 5.2 26 216-241 45-70 (101)
206 2qdd_A Mandelate racemase/muco 21.3 2.6E+02 0.0088 24.5 7.4 138 13-172 152-299 (378)
207 2k9q_A Uncharacterized protein 21.2 27 0.00093 22.8 0.7 52 219-270 5-56 (77)
208 2xi8_A Putative transcription 21.1 29 0.00098 21.5 0.8 17 222-238 7-23 (66)
209 2gdq_A YITF; mandelate racemas 21.0 90 0.0031 27.7 4.3 98 59-167 194-293 (382)
210 3qq6_A HTH-type transcriptiona 21.0 29 0.00099 22.9 0.8 51 219-269 13-64 (78)
211 3sbf_A Mandelate racemase / mu 21.0 1.7E+02 0.0058 26.1 6.2 100 59-170 211-312 (401)
212 2pju_A Propionate catabolism o 21.0 1.1E+02 0.0039 25.0 4.6 68 96-168 92-161 (225)
213 3cq9_A Uncharacterized protein 20.9 1.1E+02 0.0036 25.2 4.4 41 229-269 77-118 (227)
214 4eiv_A Deoxyribose-phosphate a 20.9 2E+02 0.0069 24.7 6.2 73 12-85 46-121 (297)
215 3ivs_A Homocitrate synthase, m 20.8 4.7E+02 0.016 23.6 9.8 101 59-168 57-171 (423)
216 2omk_A Hypothetical protein; s 20.6 1.5E+02 0.0051 24.4 5.3 40 229-268 104-143 (231)
217 2a4a_A Deoxyribose-phosphate a 20.5 1.7E+02 0.0059 24.9 5.8 93 12-109 52-153 (281)
218 3eus_A DNA-binding protein; st 20.5 1.6E+02 0.0056 19.4 4.7 54 217-270 15-68 (86)
219 1x57_A Endothelial differentia 20.4 49 0.0017 22.3 1.9 22 218-239 15-36 (91)
220 4h3v_A Oxidoreductase domain p 20.4 98 0.0033 26.9 4.4 63 219-283 49-121 (390)
221 3rc1_A Sugar 3-ketoreductase; 20.2 1.2E+02 0.004 26.4 4.9 68 219-289 64-141 (350)
222 3ble_A Citramalate synthase fr 20.1 2.3E+02 0.0078 24.6 6.7 101 59-167 37-156 (337)
223 2p3z_A L-rhamnonate dehydratas 20.1 3E+02 0.01 24.6 7.7 97 60-169 233-333 (415)
No 1
>1pyf_A IOLS protein; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; 1.80A {Bacillus subtilis} SCOP: c.1.7.1 PDB: 1pz0_A*
Probab=100.00 E-value=1.5e-56 Score=405.09 Aligned_cols=258 Identities=21% Similarity=0.287 Sum_probs=219.1
Q ss_pred HHHHHHHHHcCCceeehHhHHH--------HHHHhccCCCCccceEEEccccCCC------CCCCHHHHHHHHHHHHhhc
Q 022088 11 LPLLTWLIYMGLLKISMASSSI--------EFVERGHQSSWIRSEGDLTKWVPPP------VKMTSSIVRESIDVSRRRM 76 (303)
Q Consensus 11 ~~lv~~Al~~Gi~~~DtA~~y~--------~~~~~~~~~~~r~~~~I~tK~~~~~------~~~~~~~i~~sve~SL~~L 76 (303)
.++|+.|+++|||+||||..|+ |++++.. .|++++|+||++..+ .+.+++.+++++++||+||
T Consensus 38 ~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~---~R~~~~i~TK~g~~~~~~~~~~~~~~~~i~~~~~~SL~rL 114 (312)
T 1pyf_A 38 KELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREF---NREDVVIATKAAHRKQGNDFVFDNSPDFLKKSVDESLKRL 114 (312)
T ss_dssp HHHHHHHHHTTCCEEECCTTTTTTHHHHHHHHHHTTS---CGGGCEEEEEECEEEETTEEEECCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEECccccCCCchHHHHHHHhhhc---CCCeEEEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHh
Confidence 5799999999999999999995 4456543 588999999975211 3678999999999999999
Q ss_pred CCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHcCCCeeeecccccccccChhhhHHHH
Q 022088 77 DVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVVDMRPQQKMAEL 156 (303)
Q Consensus 77 g~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~~q~~~n~l~~~~~~~~~~~ 156 (303)
||||||+|++|||+...+ .+++|++|++|+++||||+||||||++++++++++. .+|+++|++||++++..+.+++++
T Consensus 115 ~~dyiDl~~lH~p~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~-~~~~~~Q~~~~~~~~~~e~~l~~~ 192 (312)
T 1pyf_A 115 NTDYIDLFYIHFPDEHTP-KDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANKD-GLVDVLQGEYNLLNREAEKTFFPY 192 (312)
T ss_dssp TSSCBSEEEECSCCSSSC-HHHHHHHHHHHHHTTSBSCEEEESCCHHHHHHHTTT-SCCCEEEEECBTTBCGGGTTHHHH
T ss_pred CCCcEEEEEeCCCCCCCC-HHHHHHHHHHHHHCCCcCEEEecCCCHHHHHHHHhh-CCceEEeccCCccccchHHHHHHH
Confidence 999999999999988777 799999999999999999999999999999999886 579999999999999887789999
Q ss_pred HHHhCCeEEeeccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhccCCc--hhHHHHHHHHHHHHHHhCCCHHH
Q 022088 157 CQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGW--SQFQVLLQTLKRIASKHGVSIPV 234 (303)
Q Consensus 157 ~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~ia~~~g~s~~q 234 (303)
|+++||++++|+||++|+|++++.... +++..+ ++...+++..+ +......+.++++|+++|+|++|
T Consensus 193 ~~~~gi~v~a~spL~~G~L~~~~~~~~---~~~~~~--------~r~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aq 261 (312)
T 1pyf_A 193 TKEHNISFIPYFPLVSGLLAGKYTEDT---TFPEGD--------LRNEQEHFKGERFKENIRKVNKLAPIAEKHNVDIPH 261 (312)
T ss_dssp HHHHTCEEEEESTTTTTGGGTCCCTTC---CCCTTC--------GGGGSGGGSHHHHHHHHHHHHTTHHHHHHTTSCHHH
T ss_pred HHHcCCeEEEecccccccccCCCCCCC---CCCCcc--------cccccccccchhHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 999999999999999999999876531 111111 11111111111 22345578999999999999999
Q ss_pred HHHHHHhhCCCCceeeeccCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhc
Q 022088 235 VAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKK 286 (303)
Q Consensus 235 lal~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~~~~L~~e~~~~i~~~~~~ 286 (303)
+||+|++++|.|+++|+|++ +++||++|+++++++||+++++.|++++..
T Consensus 262 vaL~w~l~~~~v~~~I~g~~--~~~~l~en~~a~~~~L~~~~~~~l~~~~~~ 311 (312)
T 1pyf_A 262 IVLAWYLARPEIDILIPGAK--RADQLIDNIKTADVTLSQEDISFIDKLFAP 311 (312)
T ss_dssp HHHHHHHHSTTCCCBCCCCS--SHHHHHHHHGGGGCCCCHHHHHHHHHHTCC
T ss_pred HHHHHHHhCCCCeEEEeCCC--CHHHHHHHHhhccCCCCHHHHHHHHHHhcC
Confidence 99999999999999999999 999999999999999999999999998753
No 2
>3n6q_A YGHZ aldo-keto reductase; TIM barrel, oxidoreductase; 1.80A {Escherichia coli} SCOP: c.1.7.0 PDB: 4ast_A 4aub_A*
Probab=100.00 E-value=8.7e-56 Score=405.44 Aligned_cols=275 Identities=19% Similarity=0.245 Sum_probs=219.2
Q ss_pred HHHHHHHHHcCCceeehHhHHH----------HHHHhccCCCCccceEEEccccCCC------CCCCHHHHHHHHHHHHh
Q 022088 11 LPLLTWLIYMGLLKISMASSSI----------EFVERGHQSSWIRSEGDLTKWVPPP------VKMTSSIVRESIDVSRR 74 (303)
Q Consensus 11 ~~lv~~Al~~Gi~~~DtA~~y~----------~~~~~~~~~~~r~~~~I~tK~~~~~------~~~~~~~i~~sve~SL~ 74 (303)
.++|+.|+++|||+||||..|+ |++++......|+++||+||++... ...+++.+++++++||+
T Consensus 46 ~~~l~~Al~~Gi~~~DTA~~Yg~~~G~sE~~lG~al~~~~~~~R~~~~I~TK~g~~~~~~~~~~~~s~~~i~~~~e~SL~ 125 (346)
T 3n6q_A 46 RAILRKAFDLGITHFDLANNYGPPPGSAEENFGRLLREDFAAYRDELIISTKAGYDMWPGPYGSGGSRKYLLASLDQSLK 125 (346)
T ss_dssp HHHHHHHHHTTCCEEECCTTCTTTTTHHHHHHHHHHHHHCTTTGGGCEEEEEECSCCSSSTTSSSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEECccccCCCCCcHHHHHHHHHHhhcccccccEEEEEEecccCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 4789999999999999999996 3455543223488999999975321 12389999999999999
Q ss_pred hcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHc----CCCeeeecccccccccChh
Q 022088 75 RMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN----GIPVVSNQVQHSVVDMRPQ 150 (303)
Q Consensus 75 ~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~----~~~~~~~q~~~n~l~~~~~ 150 (303)
||||||||+|+||||+...+ ++++|++|++|+++||||+||||||++++++++... +.+++++|++||++++..+
T Consensus 126 rL~~dyiDl~~lH~p~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~Q~~~~l~~~~~~ 204 (346)
T 3n6q_A 126 RMGLEYVDIFYSHRVDENTP-MEETASALAHAVQSGKALYVGISSYSPERTQKMVELLREWKIPLLIHQPSYNLLNRWVD 204 (346)
T ss_dssp HHTCSCEEEEEECSCCTTSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHTTTCCCCEEECBCBTTBCHHH
T ss_pred HhCCCcEeEEEEeCCCCCCC-HHHHHHHHHHHHHcCCeeEEEeCCCCHHHHHHHHHHHHHcCCCeEEEeccCchhhcCcc
Confidence 99999999999999998877 799999999999999999999999999999887653 5689999999999998877
Q ss_pred h-hHHHHHHHhCCeEEeeccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhccCCchhHHHHHHHHHHHHHHhC
Q 022088 151 Q-KMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHG 229 (303)
Q Consensus 151 ~-~~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g 229 (303)
. +++++|+++||++++|+||++|+|++++..+ .| .+.+...+.. .++.+.++.. .+...++++.++++|+++|
T Consensus 205 ~~~l~~~~~~~gi~v~a~spL~~G~L~g~~~~~---~~-~~~r~~~~~~-~~~~~~~~~~-~~~~~~~~~~l~~iA~~~g 278 (346)
T 3n6q_A 205 KSGLLDTLQNNGVGCIAFTPLAQGLLTGKYLNG---IP-QDSRMHREGN-KVRGLTPKML-TEANLNSLRLLNEMAQQRG 278 (346)
T ss_dssp HTTHHHHHHHHTCEEEEBSTTGGGGGGTSCC----------------------------C-CHHHHHHHHHHHHHHHHTT
T ss_pred hhhHHHHHHHcCCeEEEeccccCeecCCCccCC---CC-Cccccccccc-cccccchhhh-hHHHHHHHHHHHHHHHHhC
Confidence 6 8999999999999999999999999998754 12 1111111000 0000111111 1345567889999999999
Q ss_pred CCHHHHHHHHHhhCCCCceeeeccCCCCHhHHHHhHhhh-cCCCCHHHHHHHHHHHhcCCCCccccC
Q 022088 230 VSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIF-MLSLDEDDVNSIQEVTKKGKDLLGVIG 295 (303)
Q Consensus 230 ~s~~qlal~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~-~~~L~~e~~~~i~~~~~~~~~~~~~~~ 295 (303)
+|++|+||+|++++|.|+++|+|++ +++||++|++++ +++||+++++.|+++.++ .+..+|+.
T Consensus 279 ~t~aqvaL~w~l~~~~v~~~I~g~~--~~~~l~en~~a~~~~~Ls~e~~~~i~~~~~~-~~~~~w~~ 342 (346)
T 3n6q_A 279 QSMAQMALSWLLKDDRVTSVLIGAS--RAEQLEENVQALNNLTFSTKELAQIDQHIAD-GELNLWQA 342 (346)
T ss_dssp CCHHHHHHHHHTSSTTCSEEEECCS--SHHHHHHHHGGGGCCCCCHHHHHHHHHHHHH-TTCC----
T ss_pred cCHHHHHHHHHHhCCCCcEEEcCCC--CHHHHHHHHhhccCCCCCHHHHHHHHHHHhc-cCCcchhh
Confidence 9999999999999999999999999 999999999998 689999999999999987 45666853
No 3
>3eau_A Voltage-gated potassium channel subunit beta-2; kvbeta, cortisone, NADPH, cytoplasm, ION transport, ionic channel, NADP, phosphoprotein; HET: NDP PDN; 1.82A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2r9r_A* 2a79_A* 3lnm_A* 1exb_A* 3eb4_A* 3eb3_A* 1qrq_A* 1zsx_A*
Probab=100.00 E-value=1.3e-55 Score=401.53 Aligned_cols=265 Identities=17% Similarity=0.215 Sum_probs=220.9
Q ss_pred HHHHHHHHHcCCceeehHhHH--------HHHHHhccCCCCccceEEEccccCC-----CCCCCHHHHHHHHHHHHhhcC
Q 022088 11 LPLLTWLIYMGLLKISMASSS--------IEFVERGHQSSWIRSEGDLTKWVPP-----PVKMTSSIVRESIDVSRRRMD 77 (303)
Q Consensus 11 ~~lv~~Al~~Gi~~~DtA~~y--------~~~~~~~~~~~~r~~~~I~tK~~~~-----~~~~~~~~i~~sve~SL~~Lg 77 (303)
.++|+.|+++|||+||||..| +|++++.. +..|+++||+||++.. ..+++++.+++++++||+|||
T Consensus 36 ~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~-~~~R~~v~I~TK~~~~~~~~~~~~~s~~~i~~~~e~SL~rLg 114 (327)
T 3eau_A 36 EHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKK-GWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQ 114 (327)
T ss_dssp HHHHHHHHHTTCCEEEEETTGGGGHHHHHHHHHHHHH-TCCGGGCEEEEEESBCCSSGGGBSSSHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEECccccCCCChHHHHHHHHHhc-CCccCeEEEEEeecCCCCCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 478999999999999999999 45566654 2458899999998532 124689999999999999999
Q ss_pred CCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHc-----CCCeeeecccccccccCh-hh
Q 022088 78 VPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-----GIPVVSNQVQHSVVDMRP-QQ 151 (303)
Q Consensus 78 ~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~-----~~~~~~~q~~~n~l~~~~-~~ 151 (303)
|||||+|++|||+...+ ++++|++|++|+++||||+||||||++++++++... .++|+++|++||++++.. +.
T Consensus 115 ~dyiDl~~lH~p~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~~~~~~~~~~ 193 (327)
T 3eau_A 115 LEYVDVVFANRPDPNTP-MEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEV 193 (327)
T ss_dssp CSCEEEEEESSCCTTSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHTTCCCCCEEEEECBTTBCHHHHH
T ss_pred CCccceEEEeCCCCCCC-HHHHHHHHHHHHHcCCeeEEeecCCCHHHHHHHHHHHHHcCCCCceeecccccccccchhHh
Confidence 99999999999998877 799999999999999999999999999999988753 258999999999998864 55
Q ss_pred hHHHHHHHhCCeEEeeccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhccCCc--hhHHHHHHHHHHHHHHhC
Q 022088 152 KMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGW--SQFQVLLQTLKRIASKHG 229 (303)
Q Consensus 152 ~~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~ia~~~g 229 (303)
+++++|+++||++++|+||++|+|++++..+ .| ...+... ..+....+++..+ .....+++.++++|+++|
T Consensus 194 ~l~~~~~~~gi~v~a~spL~~G~Ltg~~~~~---~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g 266 (327)
T 3eau_A 194 QLPELFHKIGVGAMTWSPLACGIVSGKYDSG---IP-PYSRASL---KGYQWLKDKILSEEGRRQQAKLKELQAIAERLG 266 (327)
T ss_dssp HHHHHHHHHCCEEEEECTTGGGGGGTTTTTS---CC-TTSGGGS---TTCHHHHHHHHSHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHcCCeEEEeccccCceecCcccCC---CC-CCccccc---ccccccccccccchhHHHHHHHHHHHHHHHHhC
Confidence 7999999999999999999999999998764 22 1111111 1111111121111 123456799999999999
Q ss_pred CCHHHHHHHHHhhCCCCceeeeccCCCCHhHHHHhHhhhcC--CCCHHHHHHHHHHHhc
Q 022088 230 VSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFML--SLDEDDVNSIQEVTKK 286 (303)
Q Consensus 230 ~s~~qlal~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~~~--~L~~e~~~~i~~~~~~ 286 (303)
+|++|+||+|++++|+|+++|+|++ +++||++|++++++ +|++++++.|+++.++
T Consensus 267 ~s~aqvaL~w~l~~~~v~~vI~g~~--~~~~l~en~~a~~~~~~L~~e~~~~i~~~~~~ 323 (327)
T 3eau_A 267 CTLPQLAIAWCLRNEGVSSVLLGAS--NAEQLMENIGAIQVLPKLSSSIVHEIDSILGN 323 (327)
T ss_dssp SCHHHHHHHHHHSSTTCCEEEECCS--SHHHHHHHHGGGGGGGGCCHHHHHHHHHHHCC
T ss_pred cCHHHHHHHHHHhCCCCceEEeCCC--CHHHHHHHHHHhccCCCCCHHHHHHHHHHhhc
Confidence 9999999999999999999999999 99999999999998 8999999999999865
No 4
>1pz1_A GSP69, general stress protein 69; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; HET: NAP; 2.20A {Bacillus subtilis} SCOP: c.1.7.1
Probab=100.00 E-value=1.3e-55 Score=402.01 Aligned_cols=262 Identities=18% Similarity=0.264 Sum_probs=222.2
Q ss_pred HHHHHHHHHcCCceeehHhHHH--------HHHHhccCCCCccceEEEcccc--CCCC----CCCHHHHHHHHHHHHhhc
Q 022088 11 LPLLTWLIYMGLLKISMASSSI--------EFVERGHQSSWIRSEGDLTKWV--PPPV----KMTSSIVRESIDVSRRRM 76 (303)
Q Consensus 11 ~~lv~~Al~~Gi~~~DtA~~y~--------~~~~~~~~~~~r~~~~I~tK~~--~~~~----~~~~~~i~~sve~SL~~L 76 (303)
.++|+.|+++|||+||||+.|+ |++++... .|++++|+||++ .... +.+++.+++++++||+||
T Consensus 37 ~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~--~R~~~~i~TK~~~~~~~~~~~~~~~~~~i~~~~~~SL~rL 114 (333)
T 1pz1_A 37 IETIRAALDQGITLIDTAPAYGFGQSEEIVGKAIKEYM--KRDQVILATKTALDWKNNQLFRHANRARIVEEVENSLKRL 114 (333)
T ss_dssp HHHHHHHHHTTCCEEECCTTGGGGHHHHHHHHHHHHHT--CGGGCEEEEEECEEESSSCEEECCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCeEECccccCCCchHHHHHHHHhcCC--CcCeEEEEEeeCccCCCCCCCCCCCHHHHHHHHHHHHHHh
Confidence 5789999999999999999995 45665532 588999999996 2211 468999999999999999
Q ss_pred CCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHcCCCeeeecccccccccChhhhHHHH
Q 022088 77 DVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVVDMRPQQKMAEL 156 (303)
Q Consensus 77 g~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~~q~~~n~l~~~~~~~~~~~ 156 (303)
||||||+|++|||+...+ .+++|++|++|+++||||+||||||++++++++.+. .+|+++|++||++++..+.+++++
T Consensus 115 g~dyiDl~~lH~p~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~-~~~~~~Q~~~nl~~~~~e~~l~~~ 192 (333)
T 1pz1_A 115 QTDYIDLYQVHWPDPLVP-IEETAEVMKELYDAGKIRAIGVSNFSIEQMDTFRAV-APLHTIQPPYNLFEREMEESVLPY 192 (333)
T ss_dssp TSSCBSEEEECSCCTTSC-HHHHHHHHHHHHHTTSBSCEEECSCCHHHHHHHHTT-SCCCEECCBCBTTBCGGGGTHHHH
T ss_pred CCCceeEEEecCCCCCCC-HHHHHHHHHHHHHCCcCCEEEecCCCHHHHHHHHhc-CCcEEEeccccCccCchHHHHHHH
Confidence 999999999999988776 799999999999999999999999999999999987 789999999999999887889999
Q ss_pred HHHhCCeEEeeccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhccCCchhHHHHHHHHHHHHHHhCC-CHHHH
Q 022088 157 CQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGV-SIPVV 235 (303)
Q Consensus 157 ~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~-s~~ql 235 (303)
|+++||++++|+||++|+|++++.......| .+.+...+ .|.. ...+...++++.++++|+++|+ |++|+
T Consensus 193 ~~~~gi~v~a~spL~~G~Ltg~~~~~~~~~~-~~~r~~~~---~~~~-----~~~~~~~~~~~~l~~ia~~~g~~s~aqv 263 (333)
T 1pz1_A 193 AKDNKITTLLYGSLCRGLLTGKMTEEYTFEG-DDLRNHDP---KFQK-----PRFKEYLSAVNQLDKLAKTRYGKSVIHL 263 (333)
T ss_dssp HHHTTCEEEEBCTTGGGTTSSCCCTTCCCCT-TCGGGSCG---GGST-----TTHHHHHHHHHHHHHHHHHHHSCCHHHH
T ss_pred HHHcCceEEEeecccCCccCCCccccccCCC-cccccccc---ccch-----hhHHHHHHHHHHHHHHHHHhCCCCHHHH
Confidence 9999999999999999999998865421111 11110000 0100 0112455678999999999999 99999
Q ss_pred HHHHHhhCCCCceeeeccCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhcC
Q 022088 236 AVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 287 (303)
Q Consensus 236 al~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~~~~L~~e~~~~i~~~~~~~ 287 (303)
||+|++++|.|+++|+|++ +++||++|+++++++|++++++.|+++....
T Consensus 264 aL~w~l~~~~v~~vI~g~~--~~~~l~en~~a~~~~L~~e~~~~l~~~~~~~ 313 (333)
T 1pz1_A 264 AVRWILDQPGADIALWGAR--KPGQLEALSEITGWTLNSEDQKDINTILENT 313 (333)
T ss_dssp HHHHHHTSTTCCEEEEECC--SGGGGTTCTTSSSCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCeEEEeCCC--CHHHHHHHHHhcCCCCCHHHHHHHHHHHhhc
Confidence 9999999999999999999 9999999999999999999999999998753
No 5
>3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious D of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp}
Probab=100.00 E-value=2.6e-55 Score=403.00 Aligned_cols=262 Identities=19% Similarity=0.261 Sum_probs=217.0
Q ss_pred HHHHHHHHHcCCceeehHhHHHH----------HHHhccCCCCccceEEEccccCCC------CCCCHHHHHHHHHHHHh
Q 022088 11 LPLLTWLIYMGLLKISMASSSIE----------FVERGHQSSWIRSEGDLTKWVPPP------VKMTSSIVRESIDVSRR 74 (303)
Q Consensus 11 ~~lv~~Al~~Gi~~~DtA~~y~~----------~~~~~~~~~~r~~~~I~tK~~~~~------~~~~~~~i~~sve~SL~ 74 (303)
.++|+.|+++|||+||||..|++ ++++...+..|+++||+||++... ...+++.+++++++||+
T Consensus 67 ~~~l~~Al~~Gi~~~DTA~~Yg~~~G~sE~~lG~al~~~~~~~R~~v~I~TK~g~~~~~~~~~~~~s~~~i~~~~e~SL~ 146 (353)
T 3erp_A 67 RALLQRAFDLGITHFDLANNYGPPPGSAECNFGRILQEDFLPWRDELIISTKAGYTMWDGPYGDWGSRKYLIASLDQSLK 146 (353)
T ss_dssp HHHHHHHHHTTCCEEECCTTCTTTTTHHHHHHHHHHHHHTGGGGGGCEEEEEESSCCSSSTTSSTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEChhhhCCCCChHHHHHHHHHHhhccCCCCeEEEEeeeccCCCCCcccCCCCHHHHHHHHHHHHH
Confidence 47999999999999999999963 355542222488999999986431 12389999999999999
Q ss_pred hcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHc----CCCeeeecccccccccChh
Q 022088 75 RMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN----GIPVVSNQVQHSVVDMRPQ 150 (303)
Q Consensus 75 ~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~----~~~~~~~q~~~n~l~~~~~ 150 (303)
|||+||||+|+||||+...+ ++++|++|++|+++||||+||||||++++++++... +.+|+++|++||++++..+
T Consensus 147 rLg~dyiDl~~lH~p~~~~~-~~e~~~aL~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~Q~~~~~~~~~~e 225 (353)
T 3erp_A 147 RMGLEYVDIFYHHRPDPETP-LKETMKALDHLVRHGKALYVGISNYPADLARQAIDILEDLGTPCLIHQPKYSLFERWVE 225 (353)
T ss_dssp HHTCSCEEEEEECSCCTTSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCEEEEECBCBTTBCGGG
T ss_pred HhCCCeEeEEEecCCCCCCC-HHHHHHHHHHHHHCCCccEEEecCCCHHHHHHHHHHHHHcCCCeEEeeccccccccchh
Confidence 99999999999999998877 799999999999999999999999999999988763 5789999999999999888
Q ss_pred hhHHHHHHHhCCeEEeeccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhccCCchhHHHHHHHHHHHHHHhCC
Q 022088 151 QKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGV 230 (303)
Q Consensus 151 ~~~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~ 230 (303)
.+++++|+++||++++|+||++|+|++++..+ .| .+.+.... ..++ .++. -.+...++++.++++|+++|+
T Consensus 226 ~~ll~~~~~~gI~v~a~spL~~G~Ltg~~~~~---~p-~~~r~~~~-~~~~---~~~~-~~~~~~~~~~~l~~iA~~~g~ 296 (353)
T 3erp_A 226 DGLLALLQEKGVGSIAFSPLAGGQLTDRYLNG---IP-EDSRAASG-SRFL---KPEQ-ITADKLEKVRRLNELAARRGQ 296 (353)
T ss_dssp GTHHHHHHHHTCEEEEBSTTGGGTSSGGGTC----------------------------CCHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHcCCeEEEeccccccccCCCccCC---CC-Cccccccc-cccc---cccc-ccHHHHHHHHHHHHHHHHhCC
Confidence 88999999999999999999999999998764 22 11111100 0001 1111 112345678899999999999
Q ss_pred CHHHHHHHHHhhCCCCceeeeccCCCCHhHHHHhHhhh-cCCCCHHHHHHHHHHH
Q 022088 231 SIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIF-MLSLDEDDVNSIQEVT 284 (303)
Q Consensus 231 s~~qlal~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~-~~~L~~e~~~~i~~~~ 284 (303)
|++|+||+|++++|.|+++|||++ +++||++|++++ +++|++++++.|+++.
T Consensus 297 t~aqvaL~w~l~~~~v~~vI~G~~--~~~~l~enl~a~~~~~Ls~ee~~~i~~~~ 349 (353)
T 3erp_A 297 KLSQMALAWVLRNDNVTSVLIGAS--KPSQIEDAVGMLANRRFSAAECAEIDAIL 349 (353)
T ss_dssp CHHHHHHHHHTTTSCCCEEEECCS--SHHHHHHHHHGGGGCCCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCCcEEEeCCC--CHHHHHHHHHHhccCCCCHHHHHHHHHHH
Confidence 999999999999999999999999 999999999999 8899999999999997
No 6
>3n2t_A Putative oxidoreductase; aldo/keto reductase superfamily, AKR, AKR11B4, TIM barrel; 2.00A {Gluconobacter oxydans} SCOP: c.1.7.0
Probab=100.00 E-value=2.1e-55 Score=402.95 Aligned_cols=257 Identities=20% Similarity=0.314 Sum_probs=221.2
Q ss_pred HHHHHHHHHcCCceeehHhHHH--------HHHHhccCCCCccceEEEccccCC----C-------CCCCHHHHHHHHHH
Q 022088 11 LPLLTWLIYMGLLKISMASSSI--------EFVERGHQSSWIRSEGDLTKWVPP----P-------VKMTSSIVRESIDV 71 (303)
Q Consensus 11 ~~lv~~Al~~Gi~~~DtA~~y~--------~~~~~~~~~~~r~~~~I~tK~~~~----~-------~~~~~~~i~~sve~ 71 (303)
.++|+.|+++|||+||||..|+ |++++. .|+++||+||++.. . .+.+++.+++++++
T Consensus 55 ~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~----~R~~v~I~TK~g~~~~~~~~~~~~~~~~~~~~~i~~~~e~ 130 (348)
T 3n2t_A 55 VRTIHAALDEGINLIDTAPVYGFGHSEEIVGRALAE----KPNKAHVATKLGLHWVGEDEKNMKVFRDSRPARIRKEVED 130 (348)
T ss_dssp HHHHHHHHHTTCCEEECCTTGGGGHHHHHHHHHHHH----SCCCCEEEEEECEEEESSSTTTCEEEECCCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEChhhcCCChHHHHHHHHHhh----CCCeEEEEEeecCCCcCCCcccccccCCCCHHHHHHHHHH
Confidence 5799999999999999999994 456653 47799999999532 1 14689999999999
Q ss_pred HHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHcCCCeeeecccccccccChhh
Q 022088 72 SRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVVDMRPQQ 151 (303)
Q Consensus 72 SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~~q~~~n~l~~~~~~ 151 (303)
||+|||+||||+|++|||+...+ .+++|++|++|+++||||+||||||++++++++++. .+|+++|++||++++..+.
T Consensus 131 SL~rLg~dyiDl~~lH~p~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~-~~~~~~Q~~~nl~~~~~e~ 208 (348)
T 3n2t_A 131 SLRRLRVETIDLEQIHWPDDKTP-IDESARELQKLHQDGKIRALGVSNFSPEQMDIFREV-APLATIQPPLNLFERTIEK 208 (348)
T ss_dssp HHHHHTCSSEEEEEESSCCTTSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHH-SCCCEEECBCBTTBCGGGG
T ss_pred HHHHhCCCcEEEEEecCCCCCCC-HHHHHHHHHHHHHhCcceEEecCCCCHHHHHHHHHh-CCccEEEeeecCccCchHH
Confidence 99999999999999999998877 799999999999999999999999999999999987 4799999999999998888
Q ss_pred hHHHHHHHhCCeEEeeccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhccCCc--hhHHHHHHHHHHHHHHhC
Q 022088 152 KMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGW--SQFQVLLQTLKRIASKHG 229 (303)
Q Consensus 152 ~~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~ia~~~g 229 (303)
+++++|+++||++++|+||++|+|++++.... +++..+.+ ...+.+..+ +...++++.++++|+++|
T Consensus 209 ~l~~~~~~~gi~v~a~spL~~G~Ltg~~~~~~---~~~~~~~r--------~~~~~~~~~~~~~~~~~~~~l~~iA~~~g 277 (348)
T 3n2t_A 209 DILPYAEKHNAVVLAYGALCRGLLTGKMNRDT---TFPKDDLR--------SNDPKFQKPNFEKYLAAMDEFEKLAEKRG 277 (348)
T ss_dssp THHHHHHHHTCEEEEBCTTGGGGGGTCCCTTC---CCCTTSGG--------GGCGGGSTTHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCeEEEeecccCccccCCccCCC---CCCCcchh--------hcccccchhhHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999987652 22211111 001111111 234567789999999999
Q ss_pred CCHHHHHHHHHhhCCCCceeeeccCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhcC
Q 022088 230 VSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 287 (303)
Q Consensus 230 ~s~~qlal~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~~~~L~~e~~~~i~~~~~~~ 287 (303)
+|++|+||+|++++ +|+++|+|++ +++||++|+++++++|++++++.|+++.+..
T Consensus 278 ~t~aqvaL~w~l~~-~v~~~I~g~~--~~~~l~enl~a~~~~L~~e~~~~l~~~~~~~ 332 (348)
T 3n2t_A 278 KSVMAFAVRWVLDQ-GPVIALWGAR--KPGQVSGVKDVFGWSLTDEEKKAVDDILARH 332 (348)
T ss_dssp CCHHHHHHHHHHTT-TTEEEEEECS--SGGGGTTHHHHSSCCCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHC-CCcEEEeCCC--CHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Confidence 99999999999999 8889999999 9999999999999999999999999999764
No 7
>1lqa_A TAS protein; TIM barrel, structure 2 function project, S2F, structural GE oxidoreductase; HET: NDP; 1.60A {Escherichia coli} SCOP: c.1.7.1
Probab=100.00 E-value=1e-54 Score=398.58 Aligned_cols=265 Identities=23% Similarity=0.297 Sum_probs=219.4
Q ss_pred HHHHHHHHHcCCceeehHhHH---------------HHHHHhccCCCCccceEEEccccCCC----------CCCCHHHH
Q 022088 11 LPLLTWLIYMGLLKISMASSS---------------IEFVERGHQSSWIRSEGDLTKWVPPP----------VKMTSSIV 65 (303)
Q Consensus 11 ~~lv~~Al~~Gi~~~DtA~~y---------------~~~~~~~~~~~~r~~~~I~tK~~~~~----------~~~~~~~i 65 (303)
.++|+.|+++|||+||||..| +|++++... .|++++|+||+++.. .+++++.+
T Consensus 33 ~~~l~~Al~~Gi~~~DTA~~Yg~~~~~~~~G~sE~~lG~al~~~~--~R~~~~i~TK~~~~~~~~~~~~~~~~~~~~~~i 110 (346)
T 1lqa_A 33 HAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKHG--SREKLIIASKVSGPSRNNDKGIRPDQALDRKNI 110 (346)
T ss_dssp HHHHHHHHHTTCCEEECCTTCSSSCCTTTTTHHHHHHHHHHHHHC--CGGGCEEEEEECCSCCTTCCCSSTTCCSSHHHH
T ss_pred HHHHHHHHHcCCCEEEChhhcCCCccCCCCCccHHHHHHHHhhcC--CCceEEEEEeECCCcCCcccccCCCCCCCHHHH
Confidence 478999999999999999999 234665542 588999999997531 14789999
Q ss_pred HHHHHHHHhhcCCCcccEEEEecCC---------------C--CCCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHH
Q 022088 66 RESIDVSRRRMDVPCLDMLQFHWWD---------------Y--SNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRII 128 (303)
Q Consensus 66 ~~sve~SL~~Lg~d~iDl~~lH~~~---------------~--~~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~ 128 (303)
++++++||+||||||||+|+||||. . ..+ ++++|++|++|+++||||+||||||+.++++++
T Consensus 111 ~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~d~~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~ 189 (346)
T 1lqa_A 111 REALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVS-LLDTLDALAEYQRAGKIRYIGVSNETAFGVMRY 189 (346)
T ss_dssp HHHHHHHHHHHTSSCEEEEEECSCSSCCSCTTCCSCCCCSSCCSSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHH
T ss_pred HHHHHHHHHHhCCCceeEEEecCccccccccccccccccccccCCC-HHHHHHHHHHHHHcCCeEEEEecCCCHHHHHHH
Confidence 9999999999999999999999993 2 233 789999999999999999999999999888776
Q ss_pred HHc----C-CCeeeecccccccccChhhhHHHHHHHhCCeEEeeccccccccCCcccCCCCCCCCCCCCCCCchhHHHHh
Q 022088 129 LEN----G-IPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKR 203 (303)
Q Consensus 129 ~~~----~-~~~~~~q~~~n~l~~~~~~~~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (303)
... + .+|+++|++||++++..+.+++++|+++||++++|+||++|+|++++.... .| ...+ ...+..
T Consensus 190 ~~~~~~~~~~~~~~~Q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spL~~G~L~g~~~~~~--~p-~~~~-----~~~~~~ 261 (346)
T 1lqa_A 190 LHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFGTLTGKYLNGA--KP-AGAR-----NTLFSR 261 (346)
T ss_dssp HHHHHHHTCCCCCEEEEECBTTBCTHHHHHHHHHHHHCCEEEEECTTGGGGGGTTTGGGC--CC-TTCH-----HHHCTT
T ss_pred HHHHHHcCCCCceEEeccCChhhchhHHHHHHHHHHcCCeEEEecchhhhhhcCcccccc--CC-Ccch-----hhcchh
Confidence 543 4 469999999999999888889999999999999999999999999876431 11 0000 000100
Q ss_pred hhhccCCchhHHHHHHHHHHHHHHhCCCHHHHHHHHHhhCCCCceeeeccCCCCHhHHHHhHhhhcCCCCHHHHHHHHHH
Q 022088 204 MVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEV 283 (303)
Q Consensus 204 ~~~~~~~~~~~~~~~~~l~~ia~~~g~s~~qlal~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~~~~L~~e~~~~i~~~ 283 (303)
+ .+ ...+...++++.++++|+++|+|++|+||+|++++|.|+++|+|++ +++||++|+++++++|++++++.|+++
T Consensus 262 ~-~~-~~~~~~~~~~~~l~~ia~~~g~s~aqvaL~w~l~~~~v~~~I~g~~--~~~~l~enl~a~~~~L~~e~~~~l~~~ 337 (346)
T 1lqa_A 262 F-TR-YSGEQTQKAVAAYVDIARRHGLDPAQMALAFVRRQPFVASTLLGAT--TMDQLKTNIESLHLELSEDVLAEIEAV 337 (346)
T ss_dssp C-CT-TCSHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHTCTTEEEEEECCS--SHHHHHHHHGGGGCCCCHHHHHHHHHH
T ss_pred h-cc-cccHHHHHHHHHHHHHHHHHCcCHHHHHHHHHHhCCCCeEEEeCCC--CHHHHHHHHHhccCCCCHHHHHHHHHH
Confidence 0 00 1123456678999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HhcCCCC
Q 022088 284 TKKGKDL 290 (303)
Q Consensus 284 ~~~~~~~ 290 (303)
.+..+++
T Consensus 338 ~~~~~~p 344 (346)
T 1lqa_A 338 HQVYTYP 344 (346)
T ss_dssp HHHSCSC
T ss_pred HhhccCC
Confidence 8776554
No 8
>3lut_A Voltage-gated potassium channel subunit beta-2; voltage gating, potassium channel, KV1.2, gating charges, no analysis, ION transport; HET: NAP; 2.90A {Rattus norvegicus}
Probab=100.00 E-value=6.4e-55 Score=402.53 Aligned_cols=267 Identities=17% Similarity=0.206 Sum_probs=221.0
Q ss_pred HHHHHHHHHcCCceeehHhHHH--------HHHHhccCCCCccceEEEccccCCC-----CCCCHHHHHHHHHHHHhhcC
Q 022088 11 LPLLTWLIYMGLLKISMASSSI--------EFVERGHQSSWIRSEGDLTKWVPPP-----VKMTSSIVRESIDVSRRRMD 77 (303)
Q Consensus 11 ~~lv~~Al~~Gi~~~DtA~~y~--------~~~~~~~~~~~r~~~~I~tK~~~~~-----~~~~~~~i~~sve~SL~~Lg 77 (303)
.++|+.|+++|||+||||..|+ |++++.. +..|+++||+||++... .+++++.+++++++||+|||
T Consensus 70 ~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~-~~~R~~v~I~TK~~~~~~~~~~~~~s~~~i~~~~e~SL~rLg 148 (367)
T 3lut_A 70 EHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKK-GWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQ 148 (367)
T ss_dssp HHHHHHHHHTTCCEEEEETTGGGGHHHHHHHHHHHHH-TCCGGGCEEEEEESBCCSSGGGBSSCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEECccccCCCchHHHHHHHHHhC-CCCCceEEEEeccccCCCCccCCCCCHHHHHHHHHHHHHHhC
Confidence 4789999999999999999994 4566654 24588999999985321 24689999999999999999
Q ss_pred CCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHc-----CCCeeeecccccccccCh-hh
Q 022088 78 VPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-----GIPVVSNQVQHSVVDMRP-QQ 151 (303)
Q Consensus 78 ~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~-----~~~~~~~q~~~n~l~~~~-~~ 151 (303)
+||||+|++|||+...+ ++++|++|++|+++||||+||||||+.++++++... .++|+++|++||++++.. +.
T Consensus 149 ~dyiDl~~lH~pd~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~~~~~~~~e~ 227 (367)
T 3lut_A 149 LEYVDVVFANRPDPNTP-MEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEV 227 (367)
T ss_dssp CSCEEEEEESSCCTTSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCCCEEEEECBTTBCHHHHT
T ss_pred CCccceEEecCCCCCCC-HHHHHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHHHHHcCCCCceeeeccccceecchhHh
Confidence 99999999999998877 899999999999999999999999999999988753 268999999999999876 55
Q ss_pred hHHHHHHHhCCeEEeeccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhccCCc--hhHHHHHHHHHHHHHHhC
Q 022088 152 KMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGW--SQFQVLLQTLKRIASKHG 229 (303)
Q Consensus 152 ~~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~ia~~~g 229 (303)
+++++|+++||++++|+||++|+|++++..+ .| ...+... ..+....+++..+ ......++.++++|+++|
T Consensus 228 ~l~~~~~~~gi~v~a~spL~~G~Ltgk~~~~---~~-~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~iA~~~g 300 (367)
T 3lut_A 228 QLPELFHKIGVGAMTWSPLACGIVSGKYDSG---IP-PYSRASL---KGYQWLKDKILSEEGRRQQAKLKELQAIAERLG 300 (367)
T ss_dssp HHHHHHHHHCCEEEEECTTGGGGGGTTTTTS---CC-TTSGGGS---TTCHHHHHHHTSHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCeEEEecccccccccCCcCCC---CC-Ccccccc---cccccccccccchhhHHHHHHHHHHHHHHHHhC
Confidence 8999999999999999999999999998764 12 1111111 1111111111111 123356789999999999
Q ss_pred CCHHHHHHHHHhhCCCCceeeeccCCCCHhHHHHhHhhhcC--CCCHHHHHHHHHHHhcCC
Q 022088 230 VSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFML--SLDEDDVNSIQEVTKKGK 288 (303)
Q Consensus 230 ~s~~qlal~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~~~--~L~~e~~~~i~~~~~~~~ 288 (303)
+|++|+||+|++++++|+++|+|++ +++||++|++++++ +|++++++.|+++.++.+
T Consensus 301 ~t~aqvaL~w~l~~~~v~~vI~g~~--~~~~l~en~~a~~~~~~Ls~e~~~~i~~~~~~~~ 359 (367)
T 3lut_A 301 CTLPQLAIAWCLRNEGVSSVLLGAS--NAEQLMENIGAIQVLPKLSSSIVHEIDSILGNKP 359 (367)
T ss_dssp SCHHHHHHHHHHTSTTEEEEEECCS--SHHHHHHHHTHHHHGGGCCHHHHHHHHHHHCCCC
T ss_pred CCHHHHHHHHHHhCCCCcEEecCCC--CHHHHHHHHHhhcccCCCCHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999 99999999999986 899999999999987633
No 9
>3v0s_A Perakine reductase; AKR superfamily, oxidoreductase; HET: MLZ M3L MLY ATR; 1.77A {Rauvolfia serpentina} PDB: 3v0u_A 3v0t_A* 3uyi_A*
Probab=100.00 E-value=7.1e-56 Score=404.48 Aligned_cols=257 Identities=18% Similarity=0.254 Sum_probs=213.4
Q ss_pred HHHHHHHHHcCCceeehHhHHH---------HHHHhccCCCCccceEEEccccCCC-------CCCCHHHHHHHHHHHHh
Q 022088 11 LPLLTWLIYMGLLKISMASSSI---------EFVERGHQSSWIRSEGDLTKWVPPP-------VKMTSSIVRESIDVSRR 74 (303)
Q Consensus 11 ~~lv~~Al~~Gi~~~DtA~~y~---------~~~~~~~~~~~r~~~~I~tK~~~~~-------~~~~~~~i~~sve~SL~ 74 (303)
.++|+.|+++|||+||||..|+ |++++.. .|+++||+||+++.. .+.+++.+++++++||+
T Consensus 37 ~~~l~~Al~~Gi~~~DTA~~Yg~~G~sE~~lG~al~~~---~R~~~~i~TK~~~~~~~~~~~~~~~~~~~i~~~~~~SL~ 113 (337)
T 3v0s_A 37 IAVIKEAFNCGITFFDTSDIYGENGSNEELLGKALKQL---PREXIQVGTKFGIHEIGFSGVKAXGTPDYVRSCCEASLK 113 (337)
T ss_dssp HHHHHHHHHTTCCEEECCTTSSSTTHHHHHHHHHHTTS---CGGGCEEEEEECEEEEETTEEEECCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEChhhhCCCCcHHHHHHHHHhhc---CCcceEEEeeeccccCCCCcccCCCCHHHHHHHHHHHHH
Confidence 4789999999999999999996 3355542 588999999998642 25689999999999999
Q ss_pred hcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHcCCCeeeecccccccccChhhhHH
Q 022088 75 RMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVVDMRPQQKMA 154 (303)
Q Consensus 75 ~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~~q~~~n~l~~~~~~~~~ 154 (303)
+||+||||+|++|||+...+ ++++|++|++|+++||||+||||||++++++++... .+++++|++||++++..+.+++
T Consensus 114 rLg~dyiDl~~lH~p~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~-~~~~~~Q~~~~~~~~~~e~~l~ 191 (337)
T 3v0s_A 114 RLDVDYIDLFYIHRIDTTVP-IEITMGELXXLVEEGKIXYVGLSEASPDTIRRAHAV-HPVTALQIEYSLWTRDIEDEIV 191 (337)
T ss_dssp HHTCSCEEEEEESSCCTTSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHH-SCCCEEEEECBTTBCGGGTTHH
T ss_pred HhCCCCeeEEEecCCCCCCC-HHHHHHHHHHHHHCCCeeEEeccCCCHHHHHHHhcc-CCceEEEeeccccccchhHHHH
Confidence 99999999999999998877 799999999999999999999999999999999887 6789999999999998878899
Q ss_pred HHHHHhCCeEEeeccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhccCC--chhHHHHHHHHHHHHHHhCCCH
Q 022088 155 ELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGG--WSQFQVLLQTLKRIASKHGVSI 232 (303)
Q Consensus 155 ~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~ia~~~g~s~ 232 (303)
++|+++||++++|+||++|+|+++..... .| ..+. +...+++.. .+....+++.++++|+++|+|+
T Consensus 192 ~~~~~~gi~v~a~spL~~G~L~g~~~~~~--~~--~~~~--------~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~t~ 259 (337)
T 3v0s_A 192 PLCRQLGIGIVPYSPIGRGLFWGKAIKES--LP--ENSV--------LTSHPRFVGENLEKNKQIYYRIEALSQKHGCTP 259 (337)
T ss_dssp HHHHHHTCEEEEESTTHHHHHHHHHHHC-------------------------------------CHHHHHHHHHTTSCH
T ss_pred HHHHHcCceEEEeccccCcccCCCCCCCC--CC--Ccch--------hhcccccchhhhhhHHHHHHHHHHHHHHhCCCH
Confidence 99999999999999999999998732221 11 1110 000111111 1223455689999999999999
Q ss_pred HHHHHHHHhhCCCCceeeeccCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhc
Q 022088 233 PVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKK 286 (303)
Q Consensus 233 ~qlal~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~~~~L~~e~~~~i~~~~~~ 286 (303)
+|+||+|++++|.|+++|+|++ +++||++|+++++++|++++++.|+++...
T Consensus 260 aqvaL~w~l~~~~v~~~I~g~~--~~~~l~en~~a~~~~L~~e~~~~l~~~~~~ 311 (337)
T 3v0s_A 260 VQLALAWVLHQGEDVVPIPGTT--KIKNLHNNVGALKVXLTKEDLKEISDAVPL 311 (337)
T ss_dssp HHHHHHHHHTTCTTBCCCCCCS--CHHHHHHHHHGGGCCCCHHHHHHHHHTCC-
T ss_pred HHHHHHHHHhCCCCeEEEcCCC--CHHHHHHHHHHhccCCCHHHHHHHHHhhcc
Confidence 9999999999999999999999 999999999999999999999999999754
No 10
>1gve_A Aflatoxin B1 aldehyde reductase member 3; oxidoreductase, aldo-keto reductase, succinic semialdehyde oxidoreductase, AKR7 family; HET: NAP CIT; 1.38A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2clp_A* 2c91_A*
Probab=100.00 E-value=6.3e-54 Score=390.31 Aligned_cols=270 Identities=16% Similarity=0.179 Sum_probs=218.5
Q ss_pred HHHHHHHHHcCCceeehHhHHH---HH-HHhccC---CCCccceEEEccccCC-CCCCCHHHHHHHHHHHHhhcCCCccc
Q 022088 11 LPLLTWLIYMGLLKISMASSSI---EF-VERGHQ---SSWIRSEGDLTKWVPP-PVKMTSSIVRESIDVSRRRMDVPCLD 82 (303)
Q Consensus 11 ~~lv~~Al~~Gi~~~DtA~~y~---~~-~~~~~~---~~~r~~~~I~tK~~~~-~~~~~~~~i~~sve~SL~~Lg~d~iD 82 (303)
.++|+.|+++|||+||||..|+ .+ .+..-. +..|++++|+||+++. ..+++++.+++++++||+|||+||||
T Consensus 25 ~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~r~~~~i~TK~~~~~~~~~~~~~i~~~~~~SL~rL~~dyiD 104 (327)
T 1gve_A 25 SASVRAFLQRGHTEIDTAFVYANGQSETILGDLGLGLGRSGCKVKIATKAAPMFGKTLKPADVRFQLETSLKRLQCPRVD 104 (327)
T ss_dssp HHHHHHHHHTTCCEEECCTTGGGGHHHHHHTTSCCCTTSTTCCSEEEEEECSCTTCCSSHHHHHHHHHHHHHHTTCSCEE
T ss_pred HHHHHHHHHcCCCEEEchhhcCCCchHHHHHHHHhhcCCCCCeEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCeEe
Confidence 5789999999999999999993 22 222211 1236689999999753 12578999999999999999999999
Q ss_pred EEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHc----C-CCeeeecccccccccChhhhHHHHH
Q 022088 83 MLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN----G-IPVVSNQVQHSVVDMRPQQKMAELC 157 (303)
Q Consensus 83 l~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~----~-~~~~~~q~~~n~l~~~~~~~~~~~~ 157 (303)
+|+||||+...+ ++++|++|++|+++||||+||||||+.++++++... + ++|+++|++||++++..+.+++++|
T Consensus 105 l~~lH~p~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~g~~~~~~~Q~~~~~~~~~~e~~l~~~~ 183 (327)
T 1gve_A 105 LFYLHFPDHGTP-IEETLQACHQLHQEGKFVELGLSNYVSWEVAEICTLCKKNGWIMPTVYQGMYNAITRQVETELFPCL 183 (327)
T ss_dssp EEEECSCCTTSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCEEEEEEECBTTBCGGGTTHHHHH
T ss_pred EEEecCCCCCCC-HHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHcCCCCeEEEeccCcceecccHHHHHHHH
Confidence 999999988877 799999999999999999999999999999887764 3 6799999999999998878899999
Q ss_pred HHhCCeEEeeccccccccCCcccCCCCCCCCCCCCCCCc-hhHHHHhhhhccCCchhHHHHHHHHHHHHHH----hCCCH
Q 022088 158 QLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTP-SLQKYKRMVDAWGGWSQFQVLLQTLKRIASK----HGVSI 232 (303)
Q Consensus 158 ~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~----~g~s~ 232 (303)
+++||++++|+||++|+|++++.....+......++... ....|+ .++.. +...+.++.++++|++ +|+|+
T Consensus 184 ~~~gi~v~a~spL~~G~Ltg~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~l~~ia~~~~~~~g~s~ 259 (327)
T 1gve_A 184 RHFGLRFYAFNPLAGGLLTGRYKYQDKDGKNPESRFFGNPFSQLYM---DRYWK-EEHFNGIALVEKALKTTYGPTAPSM 259 (327)
T ss_dssp HHHTCEEEEECTTGGGGGGTCCCGGGGGSCCCSSSSSSCTTHHHHH---HHHCS-HHHHHHHHHHHHHHHHHHCTTCCCH
T ss_pred HHcCCeEEEecccccccccCcccCCCccccCCCccccccccchhhh---hcccC-hHHHHHHHHHHHHHHhhccccCCCH
Confidence 999999999999999999998754310000011111110 111222 11222 2334567999999999 99999
Q ss_pred HHHHHHHHhhCCCC-----ceeeeccCCCCHhHHHHhHhhhcC-CCCHHHHHHHHHHHhcC
Q 022088 233 PVVAVRYILDQPAV-----AGSMIGVRLGLAEHIQDTNAIFML-SLDEDDVNSIQEVTKKG 287 (303)
Q Consensus 233 ~qlal~~~l~~~~v-----~~vi~G~~~~~~~~l~en~~a~~~-~L~~e~~~~i~~~~~~~ 287 (303)
+|+||+|++++|.| +++|+|++ +++||++|+++++. +|++++++.|+++....
T Consensus 260 aqvaL~w~l~~~~v~~~~g~~~I~g~~--~~~~l~en~~a~~~~~L~~e~~~~l~~~~~~~ 318 (327)
T 1gve_A 260 ISAAVRWMYHHSQLKGTQGDAVILGMS--SLEQLEQNLALVEEGPLEPAVVDAFDQAWNLV 318 (327)
T ss_dssp HHHHHHHHHHTSSCCGGGTCEEEECCS--SHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCccccCCCeEEECCC--CHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhc
Confidence 99999999999998 78999999 99999999999987 89999999999998753
No 11
>1ur3_M Hypothetical oxidoreductase YDHF; NADP binding, aldo-keto reductase; 2.57A {Escherichia coli} SCOP: c.1.7.1 PDB: 1og6_A*
Probab=100.00 E-value=7.9e-54 Score=387.78 Aligned_cols=239 Identities=16% Similarity=0.159 Sum_probs=211.6
Q ss_pred HHHHHHHHHcCCceeehHhHHH--------HHHHhccCCCCccceEEEccccCCC----------CCCCHHHHHHHHHHH
Q 022088 11 LPLLTWLIYMGLLKISMASSSI--------EFVERGHQSSWIRSEGDLTKWVPPP----------VKMTSSIVRESIDVS 72 (303)
Q Consensus 11 ~~lv~~Al~~Gi~~~DtA~~y~--------~~~~~~~~~~~r~~~~I~tK~~~~~----------~~~~~~~i~~sve~S 72 (303)
.++|+.|+++|||+||||+.|+ |++++.. +..|+++||+||+++.. .+.+++.+++++++|
T Consensus 56 ~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~-~~~R~~v~I~TK~~~~~~~~~~~~~~~~~~~~~~i~~~~e~S 134 (319)
T 1ur3_M 56 VSFIEEHLDLGVTTVDHADIYGGYQCEAAFGEALKLA-PHLRERMEIVSKCGIATTAREENVIGHYITDRDHIIKSAEQS 134 (319)
T ss_dssp HHHHHHHHHHTCCEEECCSSTTTTTHHHHHHHHHHHC-GGGTTTCEEEEEECEECTTSTTCSSCEECCCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCeEEcccccCCCcHHHHHHHHHHhC-CCCCCeEEEEEeeccCCCCCcccccccCCCCHHHHHHHHHHH
Confidence 4789999999999999999995 4566653 23577999999997421 257899999999999
Q ss_pred HhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHc-CCCeeeecccccccccCh-h
Q 022088 73 RRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRP-Q 150 (303)
Q Consensus 73 L~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~-~~~~~~~q~~~n~l~~~~-~ 150 (303)
|+|||+||||+|++|||+...+ .+++|++|++|+++||||+||||||++++++++.+. +.+|+++|++||++++.. +
T Consensus 135 L~rLg~dyiDl~~lH~p~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~~ 213 (319)
T 1ur3_M 135 LINLATDHLDLLLIHRPDPLMD-ADEVADAFKHLHQSGKVRHFGVSNFTPAQFALLQSRLPFTLATNQVEISPVHQPLLL 213 (319)
T ss_dssp HHHHTCSCBSEEEECSCCTTCC-HHHHHHHHHHHHHTTSBCCEEEESCCHHHHHHHHTTCSSCCCCEEEECBTTBCGGGT
T ss_pred HHHhCCCCeeEEEecCCCCCCC-HHHHHHHHHHHHHCCCccEEEecCCCHHHHHHHHHhcCCCcEEEEccCchhhCchhh
Confidence 9999999999999999988776 799999999999999999999999999999998876 458999999999999876 4
Q ss_pred hhHHHHHHHhCCeEEeeccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhccCCchhHHHHHHHHHHHHHHhCC
Q 022088 151 QKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGV 230 (303)
Q Consensus 151 ~~~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~ 230 (303)
.+++++|+++||++++|+||++|+|... + ......+.++++|+++|+
T Consensus 214 ~~ll~~~~~~gi~v~a~spL~~G~L~~~--------~-------------------------~~~~~~~~l~~ia~~~g~ 260 (319)
T 1ur3_M 214 DGTLDQLQQLRVRPMAWSCLGGGRLFND--------D-------------------------YFQPLRDELAVVAEELNA 260 (319)
T ss_dssp SSHHHHHHHHTCCCEEECCCTTTCSSSC--------G-------------------------GGHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCeEEEeccccCccccCC--------c-------------------------hhHHHHHHHHHHHHHcCC
Confidence 6799999999999999999999987320 0 122346899999999999
Q ss_pred CH-HHHHHHHHhhCCCCceeeeccCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhc
Q 022088 231 SI-PVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKK 286 (303)
Q Consensus 231 s~-~qlal~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~~~~L~~e~~~~i~~~~~~ 286 (303)
|+ +|+||+|++++|.++++|+|++ +++||++|+++++++||++++++|+++...
T Consensus 261 t~~aqvaL~w~l~~~~~~~~I~G~~--~~~~l~en~~a~~~~Ls~ee~~~l~~~~~~ 315 (319)
T 1ur3_M 261 GSIEQVVNAWVLRLPSQPLPIIGSG--KIERVRAAVEAETLKMTRQQWFRIRKAALG 315 (319)
T ss_dssp SCHHHHHHHHHHTSTTCCEEEECCS--CHHHHHHHHGGGGCCCCHHHHHHHHHHHHS
T ss_pred ChHHHHHHHHHHhCCCCeEEEeCCC--CHHHHHHHHHhccCCCCHHHHHHHHHHhcC
Confidence 99 9999999999999999999999 999999999999999999999999999865
No 12
>3up8_A Putative 2,5-diketo-D-gluconic acid reductase B; nysgrc, PSI-biology, structural genomics; 1.96A {Sinorhizobium meliloti}
Probab=100.00 E-value=4.2e-54 Score=385.38 Aligned_cols=228 Identities=20% Similarity=0.323 Sum_probs=206.4
Q ss_pred HHHHHHHHHcCCceeehHhHH-----HHHHHhccCCCCccceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEE
Q 022088 11 LPLLTWLIYMGLLKISMASSS-----IEFVERGHQSSWIRSEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQ 85 (303)
Q Consensus 11 ~~lv~~Al~~Gi~~~DtA~~y-----~~~~~~~~~~~~r~~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iDl~~ 85 (303)
.++|+.|+++|||+||||+.| +|++++.. +..|+++||+||+++. +.+++.+++++++||+|||+||||+|+
T Consensus 50 ~~~v~~Al~~Gi~~~DTA~~Yg~E~~lG~al~~~-~~~R~~v~I~TK~~~~--~~~~~~i~~~~e~SL~rLg~dyiDl~l 126 (298)
T 3up8_A 50 LRILPQALKLGFRHVDTAQIYGNEAEVGEAIQKS-GIPRADVFLTTKVWVD--NYRHDAFIASVDESLRKLRTDHVDLLL 126 (298)
T ss_dssp HHHHHHHHHHTCCEEECCTTTTCHHHHHHHHHHH-TCCGGGCEEEEEECGG--GCSHHHHHHHHHHHHHHHTSSCEEEEE
T ss_pred HHHHHHHHHcCCCEEECCCcccCHHHHHHHHHHc-CCChHHEEEEeccCCC--CCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 478999999999999999999 56677654 2458899999999875 678999999999999999999999999
Q ss_pred EecCCCCCCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHc-CCCeeeecccccccccChhhhHHHHHHHhCCeE
Q 022088 86 FHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKL 164 (303)
Q Consensus 86 lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~-~~~~~~~q~~~n~l~~~~~~~~~~~~~~~gi~v 164 (303)
+|||+...+ .+++|++|++|+++||||+||||||++++++++.+. +.+|+++|++||++.+ +.+++++|+++||++
T Consensus 127 lH~p~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~--~~~l~~~~~~~gi~v 203 (298)
T 3up8_A 127 LHWPGSDVP-MAERIGALNEVRNAGKVRHIGISNFNTTQMEEAARLSDAPIATNQVEYHPYLD--QTKVLQTARRLGMSL 203 (298)
T ss_dssp ESCSCCSSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCEEEEEEECBTTBC--CHHHHHHHHHHTCEE
T ss_pred EccCCCCCC-HHHHHHHHHHHHHcCCccEEEEcCCCHHHHHHHHHhCCCCceEEEEecccccc--cHHHHHHHHHCCCEE
Confidence 999988776 799999999999999999999999999999999887 5689999999999976 458999999999999
Q ss_pred EeeccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhccCCchhHHHHHHHHHHHHHHhCCCHHHHHHHHHhhCC
Q 022088 165 ITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQP 244 (303)
Q Consensus 165 ia~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~~qlal~~~l~~~ 244 (303)
++|+||++|.+... +.++++|+++|+|++|+||+|++++|
T Consensus 204 ~a~spL~~G~l~~~----------------------------------------~~l~~ia~~~g~s~aqvaL~w~l~~p 243 (298)
T 3up8_A 204 TSYYAMANGKVPAD----------------------------------------PLLTEIGGRHGKTAAQVALRWLVQQQ 243 (298)
T ss_dssp EEECTTGGGHHHHC----------------------------------------HHHHHHHHHHTCCHHHHHHHHHHTST
T ss_pred EEECCCcCCccccc----------------------------------------chHHHHHHHcCCCHHHHHHHHHHHCC
Confidence 99999999964211 68899999999999999999999999
Q ss_pred CCceeeeccCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhcC
Q 022088 245 AVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 287 (303)
Q Consensus 245 ~v~~vi~G~~~~~~~~l~en~~a~~~~L~~e~~~~i~~~~~~~ 287 (303)
+|+ +|+|++ +++|+++|+++++++|+++|++.|+++.+++
T Consensus 244 ~v~-~I~g~~--~~~~l~en~~a~~~~L~~ee~~~l~~l~~~~ 283 (298)
T 3up8_A 244 DVI-VLSKTA--TEARLKENFAIFDFALTREEMAAVRELARPN 283 (298)
T ss_dssp TEE-EEECCC--SHHHHHHHHCCSSCCCCHHHHHHHHTTCCTT
T ss_pred CcE-EEECCC--CHHHHHHHHHhCCCCCCHHHHHHHHHHhccC
Confidence 886 799999 9999999999999999999999999994443
No 13
>2bp1_A Aflatoxin B1 aldehyde reductase member 2; oxidoreductase, aldo-keto reductase family 7, SSA reductase, barrel; HET: FLC NDP; 2.4A {Homo sapiens}
Probab=100.00 E-value=1.6e-53 Score=392.08 Aligned_cols=269 Identities=16% Similarity=0.173 Sum_probs=217.8
Q ss_pred HHHHHHHHHcCCceeehHhHHH---H-----HHHhccCCCCccceEEEccccCC-CCCCCHHHHHHHHHHHHhhcCCCcc
Q 022088 11 LPLLTWLIYMGLLKISMASSSI---E-----FVERGHQSSWIRSEGDLTKWVPP-PVKMTSSIVRESIDVSRRRMDVPCL 81 (303)
Q Consensus 11 ~~lv~~Al~~Gi~~~DtA~~y~---~-----~~~~~~~~~~r~~~~I~tK~~~~-~~~~~~~~i~~sve~SL~~Lg~d~i 81 (303)
.++|+.|+++|||+||||..|+ . ++++... ..|++++|+||+++. ..+++++.+++++++||+|||+|||
T Consensus 58 ~~~l~~Al~~Gin~~DTA~~Yg~G~sE~~lG~al~~~~-~~r~~v~I~TK~~~~~~~~~~~~~i~~~~e~SL~rLg~dyi 136 (360)
T 2bp1_A 58 AAAVRAFLERGHTELDTAFMYSDGQSETILGGLGLGLG-GGDCRVKIATKANPWDGKSLKPDSVRSQLETSLKRLQCPQV 136 (360)
T ss_dssp HHHHHHHHHTTCCEEECCTTGGGGHHHHHHHTSCCCTT-STTCCCEEEEEECCCTTCCSSHHHHHHHHHHHHHHHTCSCE
T ss_pred HHHHHHHHHcCCCEEECccccCCCChHHHHHHHHhhcc-CCCCeEEEEeeecCCCCCCCCHHHHHHHHHHHHHHhCCCeE
Confidence 4789999999999999999993 2 2332111 124579999999753 2257899999999999999999999
Q ss_pred cEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHc----C-CCeeeecccccccccChhhhHHHH
Q 022088 82 DMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN----G-IPVVSNQVQHSVVDMRPQQKMAEL 156 (303)
Q Consensus 82 Dl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~----~-~~~~~~q~~~n~l~~~~~~~~~~~ 156 (303)
|+|+||||+...+ ++++|++|++|+++||||+||||||+.++++++... + ++|+++|++||++++..+.+++++
T Consensus 137 Dl~~lH~p~~~~~-~~e~~~aL~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~g~~~~~~~Q~~yn~~~~~~e~~l~~~ 215 (360)
T 2bp1_A 137 DLFYLHAPDHGTP-VEETLHACQRLHQEGKFVELGLSNYASWEVAEICTLCKSNGWILPTVYQGMYNATTRQVETELFPC 215 (360)
T ss_dssp EEEEECSCCTTSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCEEEEEEECBTTBCGGGTTHHHH
T ss_pred eEEEecCCCCCCC-HHHHHHHHHHHHHCCCccEEEEeCCCHHHHHHHHHHHHHcCCCCceEEeeccchhhccchhhHHHH
Confidence 9999999988777 799999999999999999999999999999887764 3 579999999999998887889999
Q ss_pred HHHhCCeEEeeccccccccCCcccCCCCCCCCCCCCCCCc-hhHHHHhhhhccCCchhHHHHHHHHHHHHHH----hCCC
Q 022088 157 CQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTP-SLQKYKRMVDAWGGWSQFQVLLQTLKRIASK----HGVS 231 (303)
Q Consensus 157 ~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~----~g~s 231 (303)
|+++||++++|+||++|+|++++.....+......++... ....|+ .++.. +...+.++.++++|++ +|+|
T Consensus 216 ~~~~gi~v~a~spL~~G~Ltg~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~l~~ia~~~~~~~g~s 291 (360)
T 2bp1_A 216 LRHFGLRFYAYNPLAGGLLTGKYKYEDKDGKQPVGRFFGNSWAETYR---NRFWK-EHHFEAIALVEKALQAAYGASAPS 291 (360)
T ss_dssp HHHHTCEEEEECTTGGGGGGTCCCGGGGTTTCCSBTTBSSTTHHHHH---HHHCC-HHHHHHHHHHHHHHHHHHGGGCCC
T ss_pred HHHcCCeEEEecccccCcccCCccCcCcccccccccccccccchhhh---hcccc-hhHHHHHHHHHHHHHHhhhhcCCC
Confidence 9999999999999999999998764310000011111110 011121 12222 2234567899999999 9999
Q ss_pred HHHHHHHHHhhCCCC-----ceeeeccCCCCHhHHHHhHhhhcC-CCCHHHHHHHHHHHhcC
Q 022088 232 IPVVAVRYILDQPAV-----AGSMIGVRLGLAEHIQDTNAIFML-SLDEDDVNSIQEVTKKG 287 (303)
Q Consensus 232 ~~qlal~~~l~~~~v-----~~vi~G~~~~~~~~l~en~~a~~~-~L~~e~~~~i~~~~~~~ 287 (303)
++|+||+|++++|.| +++|+|++ +++||++|+++++. +|++++++.|+++.+..
T Consensus 292 ~aqvaL~w~l~~~~v~~~~g~~vI~G~~--~~~~l~enl~a~~~~~L~~e~~~~l~~~~~~~ 351 (360)
T 2bp1_A 292 VTSAALRWMYHHSQLQGAHGDAVILGMS--SLEQLEQNLAATEEGPLEPAVVDAFNQAWHLV 351 (360)
T ss_dssp HHHHHHHHHHHHSSCCGGGTCEEEECCS--SHHHHHHHHHHHTSCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCcccccCCCeEEECCC--CHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhc
Confidence 999999999999998 78999999 99999999999997 89999999999998764
No 14
>1ynp_A Oxidoreductase, AKR11C1; aldo-keto reductase, NADPH; HET: SUC; 1.25A {Bacillus halodurans} PDB: 1ynq_A*
Probab=100.00 E-value=1.2e-53 Score=386.45 Aligned_cols=243 Identities=19% Similarity=0.254 Sum_probs=206.8
Q ss_pred HHHHHHHHHcCCceeehHhHHH--------HHHHhccCCCCccceEEEccccCCC--------CCCCHHHHHHHHHHHHh
Q 022088 11 LPLLTWLIYMGLLKISMASSSI--------EFVERGHQSSWIRSEGDLTKWVPPP--------VKMTSSIVRESIDVSRR 74 (303)
Q Consensus 11 ~~lv~~Al~~Gi~~~DtA~~y~--------~~~~~~~~~~~r~~~~I~tK~~~~~--------~~~~~~~i~~sve~SL~ 74 (303)
.++|+.|+++|||+||||+.|+ |++++. .|+++||+||+++.. .+.+++.+++++++||+
T Consensus 51 ~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~----~R~~v~I~TK~~~~~~~~~~~~~~~~~~~~v~~~~e~SL~ 126 (317)
T 1ynp_A 51 RRIMDEVLELGINYLDTADLYNQGLNEQFVGKALKG----RRQDIILATKVGNRFEQGKEGWWWDPSKAYIKEAVKDSLR 126 (317)
T ss_dssp HHHHHHHHHTTCCEEECSCBTTBCCCHHHHHHHHTT----CGGGCEEEEEC---------------CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCeEECccccCCCchHHHHHHHHhc----CCCeEEEEeeeCCCcCCCCccccCCCCHHHHHHHHHHHHH
Confidence 5789999999999999999994 566654 478999999997531 35689999999999999
Q ss_pred hcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHcCCCeeeecccccccccChhhhHH
Q 022088 75 RMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVVDMRPQQKMA 154 (303)
Q Consensus 75 ~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~~q~~~n~l~~~~~~~~~ 154 (303)
|||+||||+|+||||+...+ .+++|++|++|+++||||+||||||++++++++++. .+++++|++||++++..+. ++
T Consensus 127 rL~~dyiDl~llH~p~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~-~~~~~~Q~~~nl~~~~~e~-l~ 203 (317)
T 1ynp_A 127 RLQTDYIDLYQLHGGTIDDP-IDETIEAFEELKQEGVIRYYGISSIRPNVIKEYLKR-SNIVSIMMQYSILDRRPEE-WF 203 (317)
T ss_dssp HHTCSCEEEEEECSCCTTSC-HHHHHHHHHHHHHHTSEEEEEEECCCHHHHHHHHHH-SCCCEEEEECBTTBCGGGG-GH
T ss_pred HHCCCcEeEEEecCCCCCCC-hHHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHhc-CCCEEEeccCCchhCCHHH-HH
Confidence 99999999999999988777 789999999999999999999999999999999987 5689999999999988765 99
Q ss_pred HHHHHhCCeEEeeccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhccCCchhHHHHHHHHHHHHHHhCCCHHH
Q 022088 155 ELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPV 234 (303)
Q Consensus 155 ~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~~q 234 (303)
++|+++||++++|+||++|+|+++ ..+ + +.. +.. .....+.+.++++|+ |+|++|
T Consensus 204 ~~~~~~gI~v~a~spL~~G~L~~~-~~~----~----~~~-------------~~~-~~~~~~~~~l~~ia~--g~s~aq 258 (317)
T 1ynp_A 204 PLIQEHGVSVVVRGPVARGLLSRR-PLP----E----GEG-------------YLN-YRYDELKLLRESLPT--DRPLHE 258 (317)
T ss_dssp HHHHHTTCEEEEECTTGGGTTSSS-CCC----T----TCC-------------BTT-BCHHHHHHHHHHSCS--SSCHHH
T ss_pred HHHHHcCCeEEEecCccCcccCCC-CCc----c----ccc-------------ccc-ccHHHHHHHHHHHHc--CCCHHH
Confidence 999999999999999999999886 211 0 000 000 112234578888888 999999
Q ss_pred HHHHHHhhCCCCceeeeccCCCCHhHHHHhHhhhc-CCCCHHHHHHHHHHHhcC
Q 022088 235 VAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFM-LSLDEDDVNSIQEVTKKG 287 (303)
Q Consensus 235 lal~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~~-~~L~~e~~~~i~~~~~~~ 287 (303)
+||+|++++|.|+++|+|++ +++||++|+++++ ++|++++++.|+++....
T Consensus 259 vaL~w~l~~~~v~~vI~g~~--~~~~l~en~~a~~~~~Ls~ee~~~l~~~~~~~ 310 (317)
T 1ynp_A 259 LALQYCLAHDVVATVAAGAS--SIDQVKANVQAVEATPLTAEERQHIQKLAKAA 310 (317)
T ss_dssp HHHHHHHTSTTEEEEECCCS--SHHHHHHHHHHHTSCCCCHHHHHHHHHHSCCC
T ss_pred HHHHHHHhCCCCeEEEeCCC--CHHHHHHHHHhccCCCCCHHHHHHHHHHHhhh
Confidence 99999999999999999999 9999999999999 899999999999997543
No 15
>3f7j_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.70A {Bacillus subtilis} PDB: 3d3f_A*
Probab=100.00 E-value=2.4e-53 Score=377.27 Aligned_cols=225 Identities=22% Similarity=0.323 Sum_probs=203.5
Q ss_pred HHHHHHHHHcCCceeehHhHH-----HHHHHhccCCCCccceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEE
Q 022088 11 LPLLTWLIYMGLLKISMASSS-----IEFVERGHQSSWIRSEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQ 85 (303)
Q Consensus 11 ~~lv~~Al~~Gi~~~DtA~~y-----~~~~~~~~~~~~r~~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iDl~~ 85 (303)
.++|+.|+++|||+||||+.| +|++++.. +..|+++||+||+++. +.+++.+++++++||++||+||||+|+
T Consensus 34 ~~~l~~Al~~G~~~~DTA~~Yg~E~~lG~al~~~-~~~R~~~~i~TK~~~~--~~~~~~v~~~~~~SL~rLg~dyiDl~~ 110 (276)
T 3f7j_A 34 TESVKAAIKNGYRSIDTAAIYKNEEGVGIGIKES-GVAREELFITSKVWNE--DQGYETTLAAFEKSLERLQLDYLDLYL 110 (276)
T ss_dssp HHHHHHHHHTTCCEEECCGGGSCHHHHHHHHHHH-CSCGGGCEEEEEECGG--GCSHHHHHHHHHHHHHHHTCSCEEEEE
T ss_pred HHHHHHHHHcCCCEEECcCcccCHHHHHHHHhhc-CCCcccEEEEEeeCCC--CCCHHHHHHHHHHHHHHhCCCeeEEEE
Confidence 478999999999999999999 56677653 2458899999999875 568999999999999999999999999
Q ss_pred EecCCCCCCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHc-CCCeeeecccccccccChhhhHHHHHHHhCCeE
Q 022088 86 FHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKL 164 (303)
Q Consensus 86 lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~-~~~~~~~q~~~n~l~~~~~~~~~~~~~~~gi~v 164 (303)
+|||+... ..++|++|++|+++||||+||||||+++++++++.. +++|.++|++||++.+. .+++++|+++||++
T Consensus 111 lH~p~~~~--~~~~~~~l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gi~v 186 (276)
T 3f7j_A 111 IHWPGKDK--YKDTWRALEKLYKDGKIRAIGVSNFQVHHLEELLKDAEIKPMVNQVEFHPRLTQ--KELRDYCKGQGIQL 186 (276)
T ss_dssp ESCCCSSS--HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHHTCEE
T ss_pred EecCCCCc--HHHHHHHHHHHHHcCCccEEEeccCCHHHHHHHHHhcCCCceeeeeeeccccCC--HHHHHHHHHCCCEE
Confidence 99997654 689999999999999999999999999999999876 67789999999999764 58999999999999
Q ss_pred EeeccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhccCCchhHHHHHHHHHHHHHHhCCCHHHHHHHHHhhCC
Q 022088 165 ITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQP 244 (303)
Q Consensus 165 ia~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~~qlal~~~l~~~ 244 (303)
++|+||++|.|... +.++++|+++|+|++|+||+|+++++
T Consensus 187 ~a~spl~~G~l~~~----------------------------------------~~l~~ia~~~g~t~aqval~w~l~~~ 226 (276)
T 3f7j_A 187 EAWSPLMQGQLLDN----------------------------------------EVLTQIAEKHNKSVAQVILRWDLQHG 226 (276)
T ss_dssp EEESTTGGGTTTTC----------------------------------------HHHHHHHHHHTCCHHHHHHHHHHHTT
T ss_pred EEecCCCCCccCCC----------------------------------------HHHHHHHHHhCCCHHHHHHHHHHhCC
Confidence 99999999975321 68899999999999999999999998
Q ss_pred CCceeeeccCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhc
Q 022088 245 AVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKK 286 (303)
Q Consensus 245 ~v~~vi~G~~~~~~~~l~en~~a~~~~L~~e~~~~i~~~~~~ 286 (303)
.| +|||++ +++|+++|+++++++|++++++.|+++.+.
T Consensus 227 ~v--~i~g~~--~~~~l~en~~a~~~~L~~e~~~~l~~l~~~ 264 (276)
T 3f7j_A 227 VV--TIPKSI--KEHRIIENADIFDFELSQEDMDKIDALNKD 264 (276)
T ss_dssp CE--ECCBCC--SHHHHHHHTCCSSCCCCHHHHHHHHTTCCC
T ss_pred CE--EeeCCC--CHHHHHHHHhhCCCCCCHHHHHHHHhhccC
Confidence 65 799999 999999999999999999999999999754
No 16
>3o0k_A Aldo/keto reductase; ssgcid, ALS collaborative crystallography; 1.80A {Brucella melitensis biovar}
Probab=100.00 E-value=1.3e-53 Score=379.80 Aligned_cols=224 Identities=20% Similarity=0.277 Sum_probs=200.9
Q ss_pred HHHHHHHHHcCCceeehHhHH-----HHHHHhccCCCCccceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEE
Q 022088 11 LPLLTWLIYMGLLKISMASSS-----IEFVERGHQSSWIRSEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQ 85 (303)
Q Consensus 11 ~~lv~~Al~~Gi~~~DtA~~y-----~~~~~~~~~~~~r~~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iDl~~ 85 (303)
.++|+.|+++|||+||||+.| +|++++.. +..|+++||+||+++. +.+++.+++++++||+|||+||||+|+
T Consensus 53 ~~~v~~Al~~Gi~~~DTA~~Yg~E~~lG~al~~~-~~~R~~~~i~TK~~~~--~~~~~~i~~~~e~SL~rLg~dyiDl~~ 129 (283)
T 3o0k_A 53 VSAVSEALKAGYRHIDTATIYGNEEGVGKAINGS-GIARADIFLTTKLWNS--DQGYESTLKAFDTSLKKLGTDYVDLYL 129 (283)
T ss_dssp HHHHHHHHHHTCCEEECCGGGSCHHHHHHHHHTS-SSCGGGCEEEEEECGG--GCSHHHHHHHHHHHHHHHTSSCEEEEE
T ss_pred HHHHHHHHHcCCCEEECcccccCHHHHHHHHHHc-CCCcccEEEEEccCCC--CCCHHHHHHHHHHHHHHhCCCceeEEE
Confidence 478999999999999999999 56677654 2458899999999875 568999999999999999999999999
Q ss_pred EecCCCCCCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHc-CCCeeeecccccccccChhhhHHHHHHHhCCeE
Q 022088 86 FHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKL 164 (303)
Q Consensus 86 lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~-~~~~~~~q~~~n~l~~~~~~~~~~~~~~~gi~v 164 (303)
+|||++......++|++|++|+++||||+||||||++++++++... +++++++|++||++++. .+++++|+++||++
T Consensus 130 lH~p~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v 207 (283)
T 3o0k_A 130 IHWPMPSKDLFMETWRAFIKLKEEGRVKSIGVSNFRTADLERLIKESGVTPVLNQIELHPQFQQ--DELRLFHGKHDIAT 207 (283)
T ss_dssp ECCSCSCHHHHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHSCCCSEEEEECBTTBCC--HHHHHHHHHTTCEE
T ss_pred ECCCCCCcccHHHHHHHHHHHHHCCCcceEEeccCcHHHHHHHHHhCCCCeEEEEeecCcccCc--HHHHHHHHHCCcEE
Confidence 9999876333689999999999999999999999999999999876 67789999999999764 57999999999999
Q ss_pred EeeccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhccCCchhHHHHHHHHHHHHHHhCCCHHHHHHHHHhhCC
Q 022088 165 ITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQP 244 (303)
Q Consensus 165 ia~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~~qlal~~~l~~~ 244 (303)
++|+||++|.|... +.++++|+++|+|++|+||+|+++++
T Consensus 208 ~a~spL~~G~l~~~----------------------------------------~~l~~ia~~~g~t~aqvaL~w~l~~~ 247 (283)
T 3o0k_A 208 EAWSPLGQGKLLED----------------------------------------PTLKSIAEKHAKSVAQIILRWHIETG 247 (283)
T ss_dssp EEESTTCCC-CTTC----------------------------------------HHHHHHHHHHTSCHHHHHHHHHHHHT
T ss_pred EEecCCCCCccccc----------------------------------------hHHHHHHHHhCCCHHHHHHHHHHHCC
Confidence 99999999965321 68899999999999999999999999
Q ss_pred CCceeeeccCCCCHhHHHHhHhhhcCCCCHHHHHHHHHH
Q 022088 245 AVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEV 283 (303)
Q Consensus 245 ~v~~vi~G~~~~~~~~l~en~~a~~~~L~~e~~~~i~~~ 283 (303)
.| +|||++ +++|+++|+++++++|+++|++.|+++
T Consensus 248 ~v--~I~g~~--~~~~l~en~~a~~~~Ls~ee~~~i~~l 282 (283)
T 3o0k_A 248 NI--VIPKSI--TPARIKENFDIFDFTLNGTDHDAITKL 282 (283)
T ss_dssp CE--ECCCCC--SHHHHHHHHCCSSCCCCHHHHHHHHTT
T ss_pred CE--EEeCCC--CHHHHHHHHHhCCCCCCHHHHHHHhcc
Confidence 76 699999 999999999999999999999999864
No 17
>1hw6_A 2,5-diketo-D-gluconic acid reductase; aldo-keto reductase, TIM barrel, oxidoreductase; 1.90A {Corynebacterium SP} SCOP: c.1.7.1 PDB: 1a80_A* 1m9h_A*
Probab=100.00 E-value=3.4e-53 Score=376.74 Aligned_cols=229 Identities=14% Similarity=0.211 Sum_probs=198.9
Q ss_pred HHHHHHHHHcCCceeehHhHH-----HHHHHhccCCCCccceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEE
Q 022088 11 LPLLTWLIYMGLLKISMASSS-----IEFVERGHQSSWIRSEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQ 85 (303)
Q Consensus 11 ~~lv~~Al~~Gi~~~DtA~~y-----~~~~~~~~~~~~r~~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iDl~~ 85 (303)
.++|+.|+++|||+||||+.| +|++++.. +..|+++||+||+++. +.+++.+++++++||++||+||||+|+
T Consensus 30 ~~~l~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~-~~~R~~~~i~TK~~~~--~~~~~~v~~~~~~SL~rLg~dyiDl~l 106 (278)
T 1hw6_A 30 QRAVEEALEVGYRHIDTAAIYGNEEGVGAAIAAS-GIARDDLFITTKLWND--RHDGDEPAAAIAESLAKLALDQVDLYL 106 (278)
T ss_dssp HHHHHHHHHHTCCEEECGGGTTCCHHHHHHHHHH-CCCGGGCEEEEEECCC-------CHHHHHHHHHHHHTCSCEEEEE
T ss_pred HHHHHHHHHcCCCEEECcccccCHHHHHHHHHHc-CCChhhEEEEEeeCCC--CCCHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 478999999999999999999 56777653 2458899999999875 568899999999999999999999999
Q ss_pred EecCCCCCCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHc-CCCeeeecccccccccChhhhHHHHHHHhCCeE
Q 022088 86 FHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKL 164 (303)
Q Consensus 86 lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~-~~~~~~~q~~~n~l~~~~~~~~~~~~~~~gi~v 164 (303)
+|||+.......++|++|++|+++||||+||||||++++++++++. +++|+++|++||++++. .+++++|+++||++
T Consensus 107 lH~p~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v 184 (278)
T 1hw6_A 107 VHWPTPAADNYVHAWEKMIELRAAGLTRSIGVSNHLVPHLERIVAATGVVPAVNQIELHPAYQQ--REITDWAAAHDVKI 184 (278)
T ss_dssp ECCCCTTCSSHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHSCCCSEEEEECBTTBCC--HHHHHHHHHTTCEE
T ss_pred EcCCCCCCCCHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhcCCCceeEEEEeCcccCC--HHHHHHHHHcCCEE
Confidence 9999874333789999999999999999999999999999999886 67789999999999876 47999999999999
Q ss_pred EeeccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhccCCchhHHHHHHHHHHHHHHhCCCHHHHHHHHHhhCC
Q 022088 165 ITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQP 244 (303)
Q Consensus 165 ia~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~~qlal~~~l~~~ 244 (303)
++|+||++|. ++...+ +.++++|+++|+|++|+||+|+++++
T Consensus 185 ~a~spl~~G~--~~~~~~------------------------------------~~l~~ia~~~g~s~aqvaL~w~l~~~ 226 (278)
T 1hw6_A 185 ESWGPLGQGK--YDLFGA------------------------------------EPVTAAAAAHGKTPAQAVLRWHLQKG 226 (278)
T ss_dssp EEESTTGGGS--SCCTTS------------------------------------HHHHHHHHHHTCCHHHHHHHHHHHTT
T ss_pred EEeccccCCC--cccccc------------------------------------HHHHHHHHHhCCCHHHHHHHHHHHCC
Confidence 9999999984 111111 67899999999999999999999995
Q ss_pred CCceeeeccCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhc
Q 022088 245 AVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKK 286 (303)
Q Consensus 245 ~v~~vi~G~~~~~~~~l~en~~a~~~~L~~e~~~~i~~~~~~ 286 (303)
+ ++|+|++ +++||++|+++++++|++++++.|+++...
T Consensus 227 -v-~~I~g~~--~~~~l~en~~~~~~~L~~~~~~~l~~~~~~ 264 (278)
T 1hw6_A 227 -F-VVFPKSV--RRERLEENLDVFDFDLTDTEIAAIDAMDPG 264 (278)
T ss_dssp -C-BBCCCCC--SHHHHHHHHCCSSCCCCHHHHHHHHTTCC-
T ss_pred -C-EEEcCCC--CHHHHHHHHhhcCCCCCHHHHHHHHHhhcc
Confidence 5 6899999 999999999999999999999999998754
No 18
>4f40_A Prostaglandin F2-alpha synthase/D-arabinose dehyd; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: CIT; 1.60A {Leishmania major} PDB: 4g5d_A*
Probab=100.00 E-value=2.4e-53 Score=379.59 Aligned_cols=227 Identities=19% Similarity=0.284 Sum_probs=202.2
Q ss_pred HHHHHHHHHcCCceeehHhHH-----HHHHHhccCCCCccceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEE
Q 022088 11 LPLLTWLIYMGLLKISMASSS-----IEFVERGHQSSWIRSEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQ 85 (303)
Q Consensus 11 ~~lv~~Al~~Gi~~~DtA~~y-----~~~~~~~~~~~~r~~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iDl~~ 85 (303)
.++|+.|+++|||+||||..| +|++++.. +..|+++||+||+++. +.+++.+++++++||+|||+||||+|+
T Consensus 38 ~~~v~~Al~~G~~~~DTA~~Yg~E~~vG~al~~~-~~~R~~~~I~TK~~~~--~~~~~~i~~~~~~SL~rLg~dyiDl~l 114 (288)
T 4f40_A 38 ENAVKWALCAGYRHIDTAAIYKNEESVGAGLRAS-GVPREDVFITTKLWNT--EQGYESTLAAFEESRQKLGVDYIDLYL 114 (288)
T ss_dssp HHHHHHHHHTTCCEEECCGGGTCHHHHHHHHHHH-TCCGGGCEEEEEECGG--GCSHHHHHHHHHHHHHHHTCSCEEEEE
T ss_pred HHHHHHHHHcCCCeEECcccccCHHHHHHHHHhc-CCChhhEEEEEecCCC--cCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 578999999999999999999 56677653 2458899999999876 568999999999999999999999999
Q ss_pred EecCCCCC------CcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHc-CCCeeeecccccccccChhhhHHHHHH
Q 022088 86 FHWWDYSN------PGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQ 158 (303)
Q Consensus 86 lH~~~~~~------~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~-~~~~~~~q~~~n~l~~~~~~~~~~~~~ 158 (303)
+|||+... ....++|++|++|+++||||+||||||++++++++... .++|+++|++||++++. .+++++|+
T Consensus 115 lH~p~~~~~~~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~ 192 (288)
T 4f40_A 115 IHWPRGKDILSKEGKKYLDSWRAFEQLYKEKKVRAIGVSNFHIHHLEDVLAMCTVTPMVNQVELHPLNNQ--ADLRAFCD 192 (288)
T ss_dssp ECCCCCHHHHHHHCCHHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTTCSSCCCEEEEECBTTBCC--HHHHHHHH
T ss_pred EecCCCCcccccccccHHHHHHHHHHHHHcCCccEEEeccCCHHHHHHHHHhCCCCCeEEeccCccccCC--HHHHHHHH
Confidence 99998641 33689999999999999999999999999999999886 56799999999999875 47999999
Q ss_pred HhCCeEEeeccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhccCCchhHHHHHHHHHHHHHHhCCCHHHHHHH
Q 022088 159 LTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVR 238 (303)
Q Consensus 159 ~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~~qlal~ 238 (303)
++||++++|+||++|.|.+. +.++++|+++|+|++|+||+
T Consensus 193 ~~gi~v~a~spl~~G~l~~~----------------------------------------~~l~~ia~~~g~t~aqvaL~ 232 (288)
T 4f40_A 193 AKQIKVEAWSPLGQGKLLSN----------------------------------------PILSAIGAKYNKTAAQVILR 232 (288)
T ss_dssp HTTCEEEEESTTC--CGGGC----------------------------------------HHHHHHHHHHTCCHHHHHHH
T ss_pred HCCCEEEEecCCCCCccccc----------------------------------------HHHHHHHHHhCCCHHHHHHH
Confidence 99999999999999976431 67899999999999999999
Q ss_pred HHhhCCCCceeeeccCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhc
Q 022088 239 YILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKK 286 (303)
Q Consensus 239 ~~l~~~~v~~vi~G~~~~~~~~l~en~~a~~~~L~~e~~~~i~~~~~~ 286 (303)
|+++++ .++|||++ +++|+++|+++++++|++++++.|+++.+.
T Consensus 233 w~l~~~--~~~i~g~~--~~~~l~en~~~~~~~L~~ee~~~i~~l~~~ 276 (288)
T 4f40_A 233 WNIQKN--LITIPKSV--HRERIEENADIFDFELGAEDVMSIDALNTN 276 (288)
T ss_dssp HHHHTT--CEECCBCS--SHHHHHHHHCCSSCCCCHHHHHHHHTTCCC
T ss_pred HHHhCC--CeEeeCCC--CHHHHHHHhhhcCCCCCHHHHHHHHhhccC
Confidence 999998 56899999 999999999999999999999999998754
No 19
>3b3e_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.80A {Bacillus subtilis} PDB: 3b3d_A
Probab=100.00 E-value=6.6e-53 Score=379.61 Aligned_cols=226 Identities=22% Similarity=0.321 Sum_probs=204.5
Q ss_pred HHHHHHHHHcCCceeehHhHH-----HHHHHhccCCCCccceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEE
Q 022088 11 LPLLTWLIYMGLLKISMASSS-----IEFVERGHQSSWIRSEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQ 85 (303)
Q Consensus 11 ~~lv~~Al~~Gi~~~DtA~~y-----~~~~~~~~~~~~r~~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iDl~~ 85 (303)
.++|+.|+++|||+||||+.| +|++++.. +..|+++||+||+++. +.+++.+++++++||+|||+||||+|+
T Consensus 68 ~~~l~~Al~~Gi~~~DTA~~Yg~E~~lG~al~~~-~~~R~~v~I~TK~~~~--~~~~~~i~~~~e~SL~rLg~dyiDl~~ 144 (310)
T 3b3e_A 68 TESVKAAIKNGYRSIDTAAIYKNEEGVGIGIKES-GVAREELFITSKVWNE--DQGYETTLAAFEKSLERLQLDYLDLYL 144 (310)
T ss_dssp HHHHHHHHHTTCCEEECCGGGSCHHHHHHHHHHS-SSCGGGCEEEEEECGG--GCSHHHHHHHHHHHHHHHTCSCEEEEE
T ss_pred HHHHHHHHHcCCCEEECCCccCCHHHHHHHHHhc-CCCcceEEEEEeCCCC--CCCHHHHHHHHHHHHHHhCCCeeEEEE
Confidence 479999999999999999999 56777654 2458899999999875 568999999999999999999999999
Q ss_pred EecCCCCCCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHc-CCCeeeecccccccccChhhhHHHHHHHhCCeE
Q 022088 86 FHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKL 164 (303)
Q Consensus 86 lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~-~~~~~~~q~~~n~l~~~~~~~~~~~~~~~gi~v 164 (303)
+|||+... ..++|++|++|+++||||+||||||++++++++++. +++|+++|++||++.+. .+++++|+++||++
T Consensus 145 lH~p~~~~--~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v 220 (310)
T 3b3e_A 145 IHWPGKDK--YKDTWRALEKLYKDGKIRAIGVSNFQVHHLEELLKDAEIKPMVNQVEFHPRLTQ--KELRDYCKGQGIQL 220 (310)
T ss_dssp ESCCCSSC--HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHHTCEE
T ss_pred eeCCCccc--HHHHHHHHHHHHHcCCcceEeecCCCHHHHHHHHHhcCCCcceeeeeccCccCC--HHHHHHHHHcCCEE
Confidence 99997654 789999999999999999999999999999999876 67889999999999764 58999999999999
Q ss_pred EeeccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhccCCchhHHHHHHHHHHHHHHhCCCHHHHHHHHHhhCC
Q 022088 165 ITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQP 244 (303)
Q Consensus 165 ia~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~~qlal~~~l~~~ 244 (303)
++|+||++|.|... +.++++|+++|+|++|+||+|+++++
T Consensus 221 ~a~spL~~G~l~~~----------------------------------------~~l~~iA~~~g~t~aqvaL~w~l~~~ 260 (310)
T 3b3e_A 221 EAWSPLMQGQLLDN----------------------------------------EVLTQIAEKHNKSVAQVILRWDLQHG 260 (310)
T ss_dssp EEESTTGGGTTTTC----------------------------------------HHHHHHHHHHTCCHHHHHHHHHHHTT
T ss_pred EEeccccCCCcCCC----------------------------------------HHHHHHHHHhCCCHHHHHHHHHHcCC
Confidence 99999999976321 68899999999999999999999998
Q ss_pred CCceeeeccCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhcC
Q 022088 245 AVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 287 (303)
Q Consensus 245 ~v~~vi~G~~~~~~~~l~en~~a~~~~L~~e~~~~i~~~~~~~ 287 (303)
.| +|||++ +++||++|+++++++|+++|++.|+++.++.
T Consensus 261 ~v--~I~gs~--~~~~l~en~~a~~~~Ls~ee~~~l~~l~~~~ 299 (310)
T 3b3e_A 261 VV--TIPKSI--KEHRIIENADIFDFELSQEDMDKIDALNKDE 299 (310)
T ss_dssp CE--ECCBCC--SHHHHHHHTCCSSCCCCHHHHHHHHTTCCCC
T ss_pred Ce--EEeCCC--CHHHHHHHHHhccCCCCHHHHHHHHhhhhCC
Confidence 65 699999 9999999999999999999999999997643
No 20
>2wzm_A Aldo-keto reductase; oxidoreductase; HET: NA7; 1.64A {Mycobacterium smegmatis} PDB: 2wzt_A
Probab=100.00 E-value=5.5e-53 Score=376.01 Aligned_cols=228 Identities=18% Similarity=0.212 Sum_probs=203.1
Q ss_pred HHHHHHHHHcCCceeehHhHH-----HHHHHhccCCCCccceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEE
Q 022088 11 LPLLTWLIYMGLLKISMASSS-----IEFVERGHQSSWIRSEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQ 85 (303)
Q Consensus 11 ~~lv~~Al~~Gi~~~DtA~~y-----~~~~~~~~~~~~r~~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iDl~~ 85 (303)
.++|+.|+++|||+||||..| +|++++.. +..|+++||+||+++. +++++.+++++++||+|||+||||+|+
T Consensus 38 ~~~v~~Al~~Gi~~iDTA~~Yg~E~~lG~al~~~-~~~R~~v~i~TK~~~~--~~~~~~v~~~~~~SL~rL~~dyiDl~l 114 (283)
T 2wzm_A 38 ERSVSAALEAGYRLIDTAAAYGNEAAVGRAIAAS-GIPRDEIYVTTKLATP--DQGFTSSQAAARASLERLGLDYVDLYL 114 (283)
T ss_dssp HHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHT-CCCGGGCEEEEEECGG--GCSHHHHHHHHHHHHHHHTCSCEEEEE
T ss_pred HHHHHHHHHcCCCEEECCCcccCHHHHHHHHHhc-CCCcccEEEEeccCCC--CCCHHHHHHHHHHHHHHhCCCCEeEEE
Confidence 478999999999999999999 56777653 2458899999999865 568999999999999999999999999
Q ss_pred EecCCCCCCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHc-CCCeeeecccccccccChhhhHHHHHHHhCCeE
Q 022088 86 FHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKL 164 (303)
Q Consensus 86 lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~-~~~~~~~q~~~n~l~~~~~~~~~~~~~~~gi~v 164 (303)
+|||+.......++|++|++|+++||||+||||||++++++++++. +++|+++|++||++++. .+++++|+++||++
T Consensus 115 lH~p~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v 192 (283)
T 2wzm_A 115 IHWPGGDTSKYVDSWGGLMKVKEDGIARSIGVCNFGAEDLETIVSLTYFTPAVNQIELHPLLNQ--AALREVNAGYNIVT 192 (283)
T ss_dssp ECCCTTCHHHHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEECBTTBCC--HHHHHHHHHTTCEE
T ss_pred EcCCCCCCCCHHHHHHHHHHHHHcCCccEEEEcCCCHHHHHHHHHhcCCCcccccccCCcccCC--HHHHHHHHHCCCEE
Confidence 9999764223689999999999999999999999999999999886 67889999999999875 46999999999999
Q ss_pred EeeccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhccCCchhHHHHHHHHHHHHHHhCCCHHHHHHHHHhhCC
Q 022088 165 ITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQP 244 (303)
Q Consensus 165 ia~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~~qlal~~~l~~~ 244 (303)
++|+||++|.+.. + +.++++|+++|+|++|+||+|+++++
T Consensus 193 ~a~spl~~G~l~~----~------------------------------------~~l~~ia~~~g~s~aqvaL~w~l~~~ 232 (283)
T 2wzm_A 193 EAYGPLGVGRLLD----H------------------------------------PAVTAIAEAHGRTAAQVLLRWSIQLG 232 (283)
T ss_dssp EEECTTTTTGGGG----C------------------------------------HHHHHHHHHHTCCHHHHHHHHHHHTT
T ss_pred EEecCCCCCcccc----h------------------------------------HHHHHHHHHhCCCHHHHHHHHHHHCC
Confidence 9999999984311 0 67899999999999999999999996
Q ss_pred CCceeeeccCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhcC
Q 022088 245 AVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 287 (303)
Q Consensus 245 ~v~~vi~G~~~~~~~~l~en~~a~~~~L~~e~~~~i~~~~~~~ 287 (303)
+ ++|+|++ +++||++|+++++++|++++++.|+++.+..
T Consensus 233 -~-~~I~g~~--~~~~l~en~~~~~~~L~~~~~~~l~~~~~~~ 271 (283)
T 2wzm_A 233 -N-VVISRSA--NPERIASNLDVFGFELTADEMETLNGLDDGT 271 (283)
T ss_dssp -C-EEEECCS--SHHHHHHHHCCSSCCCCHHHHHHHHTCCCCC
T ss_pred -C-EEEeCCC--CHHHHHHHHHhcCCCCCHHHHHHHHHHhhcC
Confidence 4 7899999 9999999999999999999999999987553
No 21
>1vbj_A Prostaglandin F synthase; TIM barrel, oxidoreductase; HET: NAP CIT; 2.10A {Trypanosoma brucei}
Probab=100.00 E-value=1.5e-52 Score=372.85 Aligned_cols=226 Identities=17% Similarity=0.267 Sum_probs=202.3
Q ss_pred HHHHHHHHHcCCceeehHhHH-----HHHHHhccCCCCccceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEE
Q 022088 11 LPLLTWLIYMGLLKISMASSS-----IEFVERGHQSSWIRSEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQ 85 (303)
Q Consensus 11 ~~lv~~Al~~Gi~~~DtA~~y-----~~~~~~~~~~~~r~~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iDl~~ 85 (303)
.++|+.|+++|||+||||..| +|++++.. +..|+++||+||+++. +.+++.+++++++||++||+||||+|+
T Consensus 37 ~~~v~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~-~~~R~~~~i~TK~~~~--~~~~~~v~~~~~~SL~rL~~dyiDl~~ 113 (281)
T 1vbj_A 37 ETATMWAIKSGYRHIDTAAIYKNEESAGRAIASC-GVPREELFVTTKLWNS--DQGYESTLSAFEKSIKKLGLEYVDLYL 113 (281)
T ss_dssp HHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHS-SSCGGGCEEEEEECGG--GCSHHHHHHHHHHHHHHHTCSCBSEEE
T ss_pred HHHHHHHHHcCCCEEECCcccCCHHHHHHHHHhc-CCChhHEEEEeccCCC--CCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 478999999999999999999 56677653 2458899999999875 568999999999999999999999999
Q ss_pred EecCCCCCCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHc-CCCeeeecccccccccChhhhHHHHHHHhCCeE
Q 022088 86 FHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKL 164 (303)
Q Consensus 86 lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~-~~~~~~~q~~~n~l~~~~~~~~~~~~~~~gi~v 164 (303)
+|||+ ..+ ..++|++|++|+++||||+||||||++++++++++. +++|+++|++||++++. .+++++|+++||++
T Consensus 114 lH~p~-~~~-~~~~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v 189 (281)
T 1vbj_A 114 IHWPG-KDK-FIDTWKAFEKLYADKKVRAIGVSNFHEHHIEELLKHCKVAPMVNQIELHPLLNQ--KALCEYCKSKNIAV 189 (281)
T ss_dssp ESCCC-SSC-HHHHHHHHHHHHHTTSBSCEEEESCCHHHHHHHHTSCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEE
T ss_pred EcCCC-CCC-HHHHHHHHHHHHHCCCccEEEeeCCCHHHHHHHHHhCCCCceeeeEEeccccCC--HHHHHHHHHcCCEE
Confidence 99998 444 789999999999999999999999999999999886 56789999999999875 47999999999999
Q ss_pred EeeccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhccCCchhHHHHHHHHHHHHHHhCCCHHHHHHHHHhhCC
Q 022088 165 ITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQP 244 (303)
Q Consensus 165 ia~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~~qlal~~~l~~~ 244 (303)
++|+||++|.+.. + +.++++|+++|+|++|+||+|+++++
T Consensus 190 ~a~spL~~G~~~~----~------------------------------------~~l~~ia~~~g~s~aqvaL~w~l~~~ 229 (281)
T 1vbj_A 190 TAWSPLGQGHLVE----D------------------------------------ARLKAIGGKYGKTAAQVMLRWEIQAG 229 (281)
T ss_dssp EEESTTGGGTTTT----C------------------------------------HHHHHHHHTTTCCHHHHHHHHHHHTT
T ss_pred EEecCCcCCCCCC----C------------------------------------HHHHHHHHHhCCCHHHHHHHHHHHCC
Confidence 9999999984210 1 67899999999999999999999995
Q ss_pred CCceeeeccCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhcC
Q 022088 245 AVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 287 (303)
Q Consensus 245 ~v~~vi~G~~~~~~~~l~en~~a~~~~L~~e~~~~i~~~~~~~ 287 (303)
+ ++|+|++ +++||++|+++++++|++++++.|+++....
T Consensus 230 -~-~~I~g~~--~~~~l~en~~a~~~~L~~e~~~~l~~~~~~~ 268 (281)
T 1vbj_A 230 -V-ITIPKSG--NEARIKENGNIFDFELTAEDIQVIDGMNAGH 268 (281)
T ss_dssp -C-EECCBCS--CHHHHHHHHCCSSCCCCHHHHHHHHTTCCCC
T ss_pred -C-EEecCCC--CHHHHHHHHhhcCCCCCHHHHHHHHHhhccC
Confidence 4 6899999 9999999999999999999999999987653
No 22
>1qwk_A Aldose reductase, aldo-keto reductase family 1 member C1, XH961; structural genomics, PSI, protein structure initiative; 1.60A {Caenorhabditis elegans} SCOP: c.1.7.1
Probab=100.00 E-value=1.3e-52 Score=379.77 Aligned_cols=248 Identities=17% Similarity=0.179 Sum_probs=207.1
Q ss_pred HHHHHHHHHcCCceeehHhHH-----HHHHHhc---cCCCCccceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCccc
Q 022088 11 LPLLTWLIYMGLLKISMASSS-----IEFVERG---HQSSWIRSEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLD 82 (303)
Q Consensus 11 ~~lv~~Al~~Gi~~~DtA~~y-----~~~~~~~---~~~~~r~~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iD 82 (303)
.++|+.|+++|||+||||..| +|++++. .....|+++||+||+++. +.+++.+++++++||+|||+||||
T Consensus 32 ~~~v~~Al~~Gi~~~DTA~~Yg~E~~vG~al~~~~~~~~~~R~~~~i~TK~~~~--~~~~~~i~~~~~~SL~rL~~dyiD 109 (317)
T 1qwk_A 32 ITAVKTAVKAGYRLIDTASVYQNEEAIGTAIKELLEEGVVKREELFITTKAWTH--ELAPGKLEGGLRESLKKLQLEYVD 109 (317)
T ss_dssp HHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHHTSCCGGGCEEEEEECTT--TSSTTTHHHHHHHHHHHHTCSCBS
T ss_pred HHHHHHHHHcCCCEEEccccccCHHHHHHHHHHHhhcCCCChhheEEEeeeCCC--cCCHHHHHHHHHHHHHHhCCCcee
Confidence 478999999999999999999 4666654 122358899999999875 568899999999999999999999
Q ss_pred EEEEecCCC---------CCCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHc-CCCeeeecccccccccChhhh
Q 022088 83 MLQFHWWDY---------SNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQK 152 (303)
Q Consensus 83 l~~lH~~~~---------~~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~-~~~~~~~q~~~n~l~~~~~~~ 152 (303)
+|++|||+. ..+ ..++|++|++|+++||||+||||||++++++++++. +++|+++|++||++++. .+
T Consensus 110 l~~lH~p~~~~~~~~~~~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~ 186 (317)
T 1qwk_A 110 LYLAHMPAAFNDDMSEHIASP-VEDVWRQFDAVYKAGLAKAVGVSNWNNDQISRALALGLTPVHNSQVELHLYFPQ--HD 186 (317)
T ss_dssp EEEESCSCEECTTSCSEECCC-HHHHHHHHHHHHHTTSBSSEEEESCCHHHHHHHHTTCSSCCCEEEEECBTTBCC--HH
T ss_pred EEEEeccCccccccccccCCC-HHHHHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHhcCCccceecceeccccCc--HH
Confidence 999999974 223 789999999999999999999999999999999886 56799999999999764 57
Q ss_pred HHHHHHHhCCeEEeeccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhccCCchhHHHHHHHHHHHHHHhCCCH
Q 022088 153 MAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSI 232 (303)
Q Consensus 153 ~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~ 232 (303)
++++|+++||++++|+||++|.|+ ++..... .+ .+.+. ..+.+. .+.++++|+++|+|+
T Consensus 187 l~~~~~~~gI~v~a~spL~~G~l~-~~~~~~~-~~-~~~~~----------------~~~~~~--~~~l~~ia~~~g~s~ 245 (317)
T 1qwk_A 187 HVDFCKKHNISVTSYATLGSPGRV-NFTLPTG-QK-LDWAP----------------APSDLQ--DQNVLALAEKTHKTP 245 (317)
T ss_dssp HHHHHHHTTCEEEEESTTCSCCEE-CCBCTTC-CB-CCCEE----------------CSSGGG--CHHHHHHHHHHTCCH
T ss_pred HHHHHHHcCCEEEEecCccCCCcc-ccccccc-cc-ccccc----------------cchhhc--cHHHHHHHHHHCcCH
Confidence 999999999999999999999876 4432100 00 00000 000111 278899999999999
Q ss_pred HHHHHHHHhhCCCCceeeeccCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhcCC
Q 022088 233 PVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGK 288 (303)
Q Consensus 233 ~qlal~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~~~~L~~e~~~~i~~~~~~~~ 288 (303)
+|+||+|+++++ + ++|+|++ +++||++|+++++++||+++++.|+++.+..+
T Consensus 246 aqvaL~w~l~~~-~-~vI~g~~--~~~~l~en~~a~~~~L~~e~~~~l~~~~~~~~ 297 (317)
T 1qwk_A 246 AQVLLRYALDRG-C-AILPKSI--QENRIKENFEVFDFSLTEEDIAKLEESKNSQR 297 (317)
T ss_dssp HHHHHHHHHHTT-C-EEECCCC--SHHHHHHHHCCSSCCCCHHHHHHHTTTCCCCC
T ss_pred HHHHHHHHHhCC-C-eEEeCCC--CHHHHHHHHhhcCCCCCHHHHHHHHHHhhcCc
Confidence 999999999998 3 7899999 99999999999999999999999999876543
No 23
>3buv_A 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reductase, catalytic tetrad, hepes, NADP, bIle catabolism, disease mutation, lipid metabolism; HET: NAP EPE; 1.35A {Homo sapiens} PDB: 3bur_A* 3bv7_A* 3caq_A* 3cas_A* 3cav_A* 3g1r_A* 3cot_A* 3dop_A* 3cmf_A* 3uzx_A* 3uzw_A* 3uzy_A* 3uzz_A*
Probab=100.00 E-value=3.6e-52 Score=378.35 Aligned_cols=241 Identities=17% Similarity=0.222 Sum_probs=205.9
Q ss_pred HHHHHHHHHcCCceeehHhHH-----HHHHHhc---cCCCCccceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCccc
Q 022088 11 LPLLTWLIYMGLLKISMASSS-----IEFVERG---HQSSWIRSEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLD 82 (303)
Q Consensus 11 ~~lv~~Al~~Gi~~~DtA~~y-----~~~~~~~---~~~~~r~~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iD 82 (303)
.++|+.|+++|||+||||..| +|++++. .....|++++|+||+++. ..+++.+++++++||+|||+||||
T Consensus 38 ~~~l~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~~~~g~~~R~~~~i~TK~~~~--~~~~~~v~~~~~~SL~rL~~dyiD 115 (326)
T 3buv_A 38 ATSVKVAIDTGYRHIDGAYIYQNEHEVGEAIREKIAEGKVRREDIFYCGKLWAT--NHVPEMVRPTLERTLRVLQLDYVD 115 (326)
T ss_dssp HHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHTTSCCGGGCEEEEEECGG--GCSHHHHHHHHHHHHHHHTCSCEE
T ss_pred HHHHHHHHHcCCCEEECccccCCHHHHHHHHHHHHhcCCCChhHeEEEeeeCCC--cCCHHHHHHHHHHHHHHhCCCcee
Confidence 578999999999999999999 4566654 122358899999999865 568999999999999999999999
Q ss_pred EEEEecCCCC------------------CCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHc-CCC--eeeeccc
Q 022088 83 MLQFHWWDYS------------------NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIP--VVSNQVQ 141 (303)
Q Consensus 83 l~~lH~~~~~------------------~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~-~~~--~~~~q~~ 141 (303)
+|+||||+.. ...+.++|++|++|+++||||+||||||+.++++++++. +++ |+++|++
T Consensus 116 l~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~ 195 (326)
T 3buv_A 116 LYIIEVPMAFKPGDEIYPRDENGKWLYHKSNLCATWEAMEACKDAGLVKSLGVSNFNRRQLELILNKPGLKHKPVSNQVE 195 (326)
T ss_dssp EEEESCSCCBCCSSCSSCBCTTCCBCBCCCCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCSCCCEEEEE
T ss_pred EEEEccCCccCCccccCccccccccccccccHHHHHHHHHHHHHcCCccEEEEeCCCHHHHHHHHHhCCCCCCCeeeeee
Confidence 9999999641 113689999999999999999999999999999999886 556 8999999
Q ss_pred ccccccChhhhHHHHHHHhCCeEEeeccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhccCCchhHHHHHHHH
Q 022088 142 HSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTL 221 (303)
Q Consensus 142 ~n~l~~~~~~~~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 221 (303)
||++.+. .+++++|+++||++++|+||++|.|+ ++.... .| +.+. .+.+
T Consensus 196 ~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~l~-~~~~~~--~~------------------------~~~~--~~~l 244 (326)
T 3buv_A 196 CHPYFTQ--PKLLKFCQQHDIVITAYSPLGTSRNP-IWVNVS--SP------------------------PLLK--DALL 244 (326)
T ss_dssp CBTTBCC--HHHHHHHHHTTCEEEEESTTCCCCCT-TTSCTT--SC------------------------CGGG--CHHH
T ss_pred cccccCc--HHHHHHHHHcCCEEEEeccccCCccc-cccccC--Cc------------------------cccc--cHHH
Confidence 9999764 47999999999999999999999887 443210 01 0011 2789
Q ss_pred HHHHHHhCCCHHHHHHHHHhhCCCCceeeeccCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhcCC
Q 022088 222 KRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGK 288 (303)
Q Consensus 222 ~~ia~~~g~s~~qlal~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~~~~L~~e~~~~i~~~~~~~~ 288 (303)
+++|+++|+|++|+||+|+++++ .++|||++ +++||++|+++++++|++++++.|+++.+..+
T Consensus 245 ~~ia~~~g~s~aqvaL~w~l~~~--~~~I~g~~--~~~~l~en~~~~~~~L~~e~~~~l~~~~~~~~ 307 (326)
T 3buv_A 245 NSLGKRYNKTAAQIVLRFNIQRG--VVVIPKSF--NLERIKENFQIFDFSLTEEEMKDIEALNKNVR 307 (326)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHTT--CEECCBCC--SHHHHHHHHCCSSCCCCHHHHHHHHTTCCSCC
T ss_pred HHHHHHhCCCHHHHHHHHHHhCC--CEEEeCCC--CHHHHHHHHhhcCCCCCHHHHHHHHHhccCCc
Confidence 99999999999999999999998 47899999 99999999999999999999999999876533
No 24
>3o3r_A Aldo-keto reductase family 1, member B7; aldose reductase like protein, AKR1B14, oxidoreductase; HET: NAP; 1.86A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 3qkz_A*
Probab=100.00 E-value=3.8e-52 Score=376.69 Aligned_cols=241 Identities=20% Similarity=0.338 Sum_probs=202.5
Q ss_pred HHHHHHHHHcCCceeehHhHH-----HHHHHhcc---CCCCccceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCccc
Q 022088 11 LPLLTWLIYMGLLKISMASSS-----IEFVERGH---QSSWIRSEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLD 82 (303)
Q Consensus 11 ~~lv~~Al~~Gi~~~DtA~~y-----~~~~~~~~---~~~~r~~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iD 82 (303)
.++|+.|+++|||+||||..| +|++++.. ....|+++||+||+++. ..+++.+++++++||+||||||||
T Consensus 29 ~~~l~~Al~~Gi~~~DTA~~Yg~E~~lG~al~~~~~~~~~~R~~v~I~TK~~~~--~~~~~~i~~~~~~SL~rL~~dyiD 106 (316)
T 3o3r_A 29 KEAVKAAIDAGYRHFDCAYVYQNESEVGEAIQEKIKEKAVRREDLFIVSKLWST--FFEKSLMKEAFQKTLSDLKLDYLD 106 (316)
T ss_dssp HHHHHHHHHTTCCEEECCGGGSCHHHHHHHHHHHHHTTSCCGGGCEEEEEECGG--GCSHHHHHHHHHHHHHHHTCSCEE
T ss_pred HHHHHHHHHcCCCEEEccCccCCHHHHHHHHHHHHhhCCCChHHcEEEeeeCCC--cCCHHHHHHHHHHHHHHcCCCeee
Confidence 478999999999999999999 46666542 22458899999999875 458999999999999999999999
Q ss_pred EEEEecCCC------------------CCCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHc-CC--Ceeeeccc
Q 022088 83 MLQFHWWDY------------------SNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GI--PVVSNQVQ 141 (303)
Q Consensus 83 l~~lH~~~~------------------~~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~-~~--~~~~~q~~ 141 (303)
+|+||||+. ....+.++|++|++|+++||||+||||||+.++++++++. +. +|+++|++
T Consensus 107 l~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~ 186 (316)
T 3o3r_A 107 LYLIHWPQGLQAGKEFLPKDSQGKVLMSKSTFLDAWEGMEELVDQGLVKALGVSNFNHFQIERLLNKPGLKHKPVTNQVE 186 (316)
T ss_dssp EEEESCSSCBCCSSCSSCBCTTSCBCBCSCCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCSCCCEEEEE
T ss_pred EEEEcCCccccCcccccccccccccccccccHHHHHHHHHHHHHcCCCcEEEEecCCHHHHHHHHHhCCCCCCceEeecc
Confidence 999999962 1223789999999999999999999999999999999876 33 58999999
Q ss_pred ccccccChhhhHHHHHHHhCCeEEeeccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhccCCchhHHHHHHHH
Q 022088 142 HSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTL 221 (303)
Q Consensus 142 ~n~l~~~~~~~~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 221 (303)
||++.+ +.+++++|+++||++++|+||++|... +.. + ... ..+. .+.+
T Consensus 187 ~~~~~~--~~~l~~~~~~~gi~v~a~spL~~G~~~--~~~-----~-~~~--------------------~~~~--~~~l 234 (316)
T 3o3r_A 187 CHPYLT--QEKLIQYCHSKGIAVIAYSPLGSPDRP--YAK-----P-EDP--------------------VVLE--IPKI 234 (316)
T ss_dssp CBTTBC--CHHHHHHHHTTTCEEEEECTTCCTTCT--TCC-----T-TSC--------------------CSTT--CHHH
T ss_pred CCcccc--hHHHHHHHHHcCCEEEEecccCCCCCc--ccc-----c-cch--------------------hhhc--CHHH
Confidence 999976 468999999999999999999998311 110 0 000 0011 1689
Q ss_pred HHHHHHhCCCHHHHHHHHHhhCCCCceeeeccCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhcCCC
Q 022088 222 KRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGKD 289 (303)
Q Consensus 222 ~~ia~~~g~s~~qlal~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~~~~L~~e~~~~i~~~~~~~~~ 289 (303)
+++|+++|+|++|+||+|+++++. ++|+|++ +++||++|+++++++|++++++.|+++.++.+.
T Consensus 235 ~~ia~~~g~t~aqvaL~w~l~~~~--~vi~g~~--~~~~l~en~~a~~~~L~~ee~~~l~~l~~~~r~ 298 (316)
T 3o3r_A 235 KEIAAKHKKTIAQVLIRFHVQRNV--AVIPKSV--TLSHIKENIQVFDFQLSEEDMAAILSLNRNWRA 298 (316)
T ss_dssp HHHHHHHTCCHHHHHHHHHHTTTC--EECCBCC--SHHHHHHHTCCSSCCCCHHHHHHHHTTCCCCCC
T ss_pred HHHHHHhCCCHHHHHHHHHHhCCC--EEeCCCC--CHHHHHHHHhhCCCCcCHHHHHHHHccccCCcc
Confidence 999999999999999999999983 5799999 999999999999999999999999999765443
No 25
>1afs_A 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, NAD; HET: NAP TES; 2.50A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 1lwi_A*
Probab=100.00 E-value=2.9e-52 Score=378.51 Aligned_cols=241 Identities=19% Similarity=0.256 Sum_probs=205.3
Q ss_pred HHHHHHHHHcCCceeehHhHH-----HHHHHhc---cCCCCccceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCccc
Q 022088 11 LPLLTWLIYMGLLKISMASSS-----IEFVERG---HQSSWIRSEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLD 82 (303)
Q Consensus 11 ~~lv~~Al~~Gi~~~DtA~~y-----~~~~~~~---~~~~~r~~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iD 82 (303)
.++|+.|+++|||+||||..| +|++++. .....|+++||+||+++. ..+++.+++++++||++||+||||
T Consensus 35 ~~~l~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~~~~g~~~R~~~~I~TK~~~~--~~~~~~v~~~~~~SL~rLg~dyiD 112 (323)
T 1afs_A 35 IKATKIAIDNGFRHFDSAYLYEVEEEVGQAIRSKIEDGTVKREDIFYTSKLWST--FHRPELVRTCLEKTLKSTQLDYVD 112 (323)
T ss_dssp HHHHHHHHHTTCCEEECCTTTTCHHHHHHHHHHHHHTTSCCGGGCEEEEEECGG--GCSTTTHHHHHHHHHHHHCCSSEE
T ss_pred HHHHHHHHHcCCCEEECcccccCHHHHHHHHHHHHhcCCCChHHeEEEEecCCC--cCCHHHHHHHHHHHHHHhCCCcee
Confidence 478999999999999999999 5566654 122458899999999865 457899999999999999999999
Q ss_pred EEEEecCCCC------------------CCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHc-CC--Ceeeeccc
Q 022088 83 MLQFHWWDYS------------------NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GI--PVVSNQVQ 141 (303)
Q Consensus 83 l~~lH~~~~~------------------~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~-~~--~~~~~q~~ 141 (303)
+|+||||+.. ...+.++|++|++|+++||||+||||||+.++++++++. .+ +|+++|++
T Consensus 113 l~llH~p~~~~~~~~~~~~d~~~~~~~~~~~~~e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~ 192 (323)
T 1afs_A 113 LYIIHFPMALQPGDIFFPRDEHGKLLFETVDICDTWEAMEKCKDAGLAKSIGVSNFNCRQLERILNKPGLKYKPVCNQVE 192 (323)
T ss_dssp EEEESCSCEECSSSSSSCBCTTCCBCEECCCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCSCCSEEEEE
T ss_pred EEEecCcCcCCCCcccCcccccccccccCCCHHHHHHHHHHHHHcCCcCEEEeeCCCHHHHHHHHHhcCcCCCCEEEeec
Confidence 9999999421 113789999999999999999999999999999999886 55 78999999
Q ss_pred ccccccChhhhHHHHHHHhCCeEEeeccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhccCCchhHHHHHHHH
Q 022088 142 HSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTL 221 (303)
Q Consensus 142 ~n~l~~~~~~~~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 221 (303)
||++.+. .+++++|+++||++++|+||++|.|++ +.... .| +.+. .+.+
T Consensus 193 ~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~l~~-~~~~~--~~------------------------~~~~--~~~l 241 (323)
T 1afs_A 193 CHLYLNQ--SKMLDYCKSKDIILVSYCTLGSSRDKT-WVDQK--SP------------------------VLLD--DPVL 241 (323)
T ss_dssp CBTTBCC--HHHHHHHHHHTCEEEEESTTSCCCCTT-TSCTT--SC------------------------CGGG--CHHH
T ss_pred cccccch--HHHHHHHHHcCCEEEEecCccCCcccc-ccccC--Cc------------------------chhc--CHHH
Confidence 9999764 479999999999999999999999875 32210 00 0011 2789
Q ss_pred HHHHHHhCCCHHHHHHHHHhhCCCCceeeeccCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhcCC
Q 022088 222 KRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGK 288 (303)
Q Consensus 222 ~~ia~~~g~s~~qlal~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~~~~L~~e~~~~i~~~~~~~~ 288 (303)
+++|+++|+|++|+||+|+++++ .++|||++ +++||++|+++++++|++++++.|+++....+
T Consensus 242 ~~ia~~~g~s~aqvaL~w~l~~~--~~vI~g~~--~~~~l~en~~~~~~~L~~e~~~~l~~~~~~~~ 304 (323)
T 1afs_A 242 CAIAKKYKQTPALVALRYQLQRG--VVPLIRSF--NAKRIKELTQVFEFQLASEDMKALDGLNRNFR 304 (323)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHTT--CEEEECCS--CHHHHHHHTTTTSCCCCHHHHHHHHTTCCCCC
T ss_pred HHHHHHhCCCHHHHHHHHHHhCC--CEEeeCCC--CHHHHHHHHhhccCCCCHHHHHHHHhhcccCC
Confidence 99999999999999999999998 37899999 99999999999999999999999999876533
No 26
>3ln3_A Dihydrodiol dehydrogenase; putative reductase, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MLY MSE NAD; 1.18A {Mus musculus} SCOP: c.1.7.1
Probab=100.00 E-value=5e-52 Score=377.28 Aligned_cols=241 Identities=17% Similarity=0.267 Sum_probs=204.4
Q ss_pred HHHHHHHHHcCCceeehHhHH-----HHHHHhcc---CCCCccceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCccc
Q 022088 11 LPLLTWLIYMGLLKISMASSS-----IEFVERGH---QSSWIRSEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLD 82 (303)
Q Consensus 11 ~~lv~~Al~~Gi~~~DtA~~y-----~~~~~~~~---~~~~r~~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iD 82 (303)
.++|+.|+++|||+||||..| +|++++.. ....|+++||+||+++. ..+++.+++++++||+|||+||||
T Consensus 36 ~~~v~~Al~~Gi~~~DTA~~Yg~E~~lG~al~~~~~~~~~~R~~~~I~TK~~~~--~~~~~~v~~~~~~SL~rL~~dyiD 113 (324)
T 3ln3_A 36 LEAACLALDVGYRHVDTAYAYQVEEEIGQAIQSXIXAGVVXREDLFVTTKLWCT--CFRPELVXPALEXSLXXLQLDYVD 113 (324)
T ss_dssp HHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHTTSCCGGGCEEEEEECGG--GCSHHHHHHHHHHHHHHHTCSCEE
T ss_pred HHHHHHHHHcCCCEEECcccccCHHHHHHHHHHhhccCCcccceeEEEeeeCCc--cCCHHHHHHHHHHHHHHhCCCcce
Confidence 478999999999999999999 56666642 22458899999999875 568999999999999999999999
Q ss_pred EEEEecCCCC------------------CCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHc-CCC--eeeeccc
Q 022088 83 MLQFHWWDYS------------------NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIP--VVSNQVQ 141 (303)
Q Consensus 83 l~~lH~~~~~------------------~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~-~~~--~~~~q~~ 141 (303)
+|++|||+.. .....++|++|++|+++||||+||||||++++++++++. +++ |+++|++
T Consensus 114 l~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~ 193 (324)
T 3ln3_A 114 LYIMHYPVPMXSGDNDFPVNEQGXSLLDTVDFCDTWERLEECXDAGLVXSIGVSNFNHRQLERILNXPGLXYXPVCNQVE 193 (324)
T ss_dssp EEEESCSCCBCCSSCSSCBCTTCCBCBCCCCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCCCCSEEEEE
T ss_pred EEEEecCccccccccccccccccccccccCCHHHHHHHHHHHHhcCCeeEEEecCCcHHHHHHHHHhcCccCCceeeEee
Confidence 9999999752 123789999999999999999999999999999999876 445 8999999
Q ss_pred ccccccChhhhHHHHHHHhCCeEEeeccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhccCCchhHHHHHHHH
Q 022088 142 HSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTL 221 (303)
Q Consensus 142 ~n~l~~~~~~~~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 221 (303)
||++.+ +.+++++|+++||++++|+||++|.+.. +.... .| ..+. .+.+
T Consensus 194 ~~~~~~--~~~l~~~~~~~gi~v~a~spL~~g~~~~-~~~~~--~~------------------------~~~~--~~~l 242 (324)
T 3ln3_A 194 CHLYLN--QRXLLDYCESXDIVLVAYGALGTQRYXE-WVDQN--SP------------------------VLLN--DPVL 242 (324)
T ss_dssp CBTTBC--CHHHHHHHHHTTCEEEEESTTSCCCCTT-TSCTT--SC------------------------CGGG--CHHH
T ss_pred eCcccc--hHHHHHHHHHcCCEEEEecCCCCCCccc-ccccC--Cc------------------------chhc--CHHH
Confidence 999976 4689999999999999999999997532 11110 00 0011 1689
Q ss_pred HHHHHHhCCCHHHHHHHHHhhCCCCceeeeccCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhcCC
Q 022088 222 KRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGK 288 (303)
Q Consensus 222 ~~ia~~~g~s~~qlal~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~~~~L~~e~~~~i~~~~~~~~ 288 (303)
+++|+++|+|++|+||+|+++++. ++|||++ +++||++|+++++++|++++++.|+++....+
T Consensus 243 ~~ia~~~g~t~aqvaL~w~l~~~~--~~I~g~~--~~~~l~en~~~~~~~L~~e~~~~l~~l~~~~r 305 (324)
T 3ln3_A 243 CDVAXXNXRSPALIALRYLIQRGI--VPLAQSF--XENEMRENLQVFGFQLSPEDMXTLDGLNXNFR 305 (324)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHTTC--EEEECCS--SHHHHHHHGGGGGCCCCHHHHHHHHTTCCCCC
T ss_pred HHHHHhhCCCHHHHHHHHHHhCCC--EEEeCCC--CHHHHHHHHhhCCCCcCHHHHHHHHhcccCCc
Confidence 999999999999999999999984 5899999 99999999999999999999999999976533
No 27
>1s1p_A Aldo-keto reductase family 1 member C3; TIM-barrel, oxidoreductase; HET: NAP; 1.20A {Homo sapiens} SCOP: c.1.7.1 PDB: 1s1r_A* 1s2a_A* 1s2c_A* 3uwe_A* 3r58_A* 3r43_A* 3r7m_A* 3r6i_A* 3r8h_A* 3r94_A* 3r8g_A* 1zq5_A* 1ry8_A* 1xf0_A* 1ry0_A* 2f38_A* 2fgb_A* 4dbs_A* 4dbu_A* 3gug_A* ...
Probab=100.00 E-value=8.4e-52 Score=376.58 Aligned_cols=240 Identities=20% Similarity=0.272 Sum_probs=205.2
Q ss_pred HHHHHHHHHcCCceeehHhHH-----HHHHHhc---cCCCCccceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCccc
Q 022088 11 LPLLTWLIYMGLLKISMASSS-----IEFVERG---HQSSWIRSEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLD 82 (303)
Q Consensus 11 ~~lv~~Al~~Gi~~~DtA~~y-----~~~~~~~---~~~~~r~~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iD 82 (303)
.++|+.|+++|||+||||+.| +|++++. .....|+++||+||+++. ..+++.+++++++||+|||+||||
T Consensus 35 ~~~l~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~~~~~~~~R~~~~I~TK~~~~--~~~~~~v~~~~e~SL~rLg~dyiD 112 (331)
T 1s1p_A 35 LEVTKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWST--FHRPELVRPALENSLKKAQLDYVD 112 (331)
T ss_dssp HHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHTTSCCGGGCEEEEEECGG--GCSHHHHHHHHHHHHHHHTCSCEE
T ss_pred HHHHHHHHHcCCCEEEccccccCHHHHHHHHHHHHhcCCCCchheEEEeccCCc--cCCHHHHHHHHHHHHHHhCCCcEE
Confidence 478999999999999999999 4566654 222458899999999865 568999999999999999999999
Q ss_pred EEEEecCCCC------------------CCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHc-CC--Ceeeeccc
Q 022088 83 MLQFHWWDYS------------------NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GI--PVVSNQVQ 141 (303)
Q Consensus 83 l~~lH~~~~~------------------~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~-~~--~~~~~q~~ 141 (303)
+|+||||+.. ...+.++|++|++|+++||||+||||||++++++++++. ++ +|+++|++
T Consensus 113 l~llH~p~~~~~~~~~~~~d~~g~~~~~~~~~~e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~v~Q~~ 192 (331)
T 1s1p_A 113 LYLIHSPMSLKPGEELSPTDENGKVIFDIVDLCTTWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVE 192 (331)
T ss_dssp EEEECCSCCBCCSSCSSCBCTTSCBCBCCCCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCCCCSEEEEE
T ss_pred EEEeccCcccCCCcccCCccccccccccccCHHHHHHHHHHHHHcCCccEEEEeCCCHHHHHHHHHhcCccCCCceeeee
Confidence 9999999431 113689999999999999999999999999999999886 55 78999999
Q ss_pred ccccccChhhhHHHHHHHhCCeEEeeccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhccCCchhHHHHHHHH
Q 022088 142 HSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTL 221 (303)
Q Consensus 142 ~n~l~~~~~~~~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 221 (303)
||++.+. .+++++|+++||++++|+||++|.|++ +... ..| +.+. .+.+
T Consensus 193 ~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~l~~-~~~~--~~~------------------------~~~~--~~~l 241 (331)
T 1s1p_A 193 CHPYFNR--SKLLDFCKSKDIVLVAYSALGSQRDKR-WVDP--NSP------------------------VLLE--DPVL 241 (331)
T ss_dssp CBTTBCC--HHHHHHHHHTTCEEEEESTTSCCCCTT-TSCT--TSC------------------------CGGG--CHHH
T ss_pred cCCCcCh--HHHHHHHHHcCCEEEEeccccCCcccc-cccC--CCc------------------------cccc--CHHH
Confidence 9999764 479999999999999999999999875 3211 001 0011 1788
Q ss_pred HHHHHHhCCCHHHHHHHHHhhCCCCceeeeccCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhcC
Q 022088 222 KRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 287 (303)
Q Consensus 222 ~~ia~~~g~s~~qlal~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~~~~L~~e~~~~i~~~~~~~ 287 (303)
+++|+++|+|++|+||+|+++++ + ++|+|++ +++||++|+++++++|++++++.|+++....
T Consensus 242 ~~ia~~~g~s~aqvaL~w~l~~~-~-~vI~g~~--~~~~l~en~~~~~~~L~~e~~~~l~~~~~~~ 303 (331)
T 1s1p_A 242 CALAKKHKRTPALIALRYQLQRG-V-VVLAKSY--NEQRIRQNVQVFEFQLTAEDMKAIDGLDRNL 303 (331)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHTT-C-EEEEECC--SHHHHHHHGGGGGCCCCHHHHHHHHTTCCCC
T ss_pred HHHHHHhCCCHHHHHHHHHHhCC-C-EEeeCCC--CHHHHHHHhhhcCCCcCHHHHHHHHHHhcCC
Confidence 99999999999999999999998 3 7899999 9999999999999999999999999987653
No 28
>1us0_A Aldose reductase; oxidoreductase, NADP, IDD594; HET: NDP LDT CIT; 0.66A {Homo sapiens} SCOP: c.1.7.1 PDB: 1pwl_A* 1t41_A* 1pwm_A* 1x96_A* 1x97_A* 1x98_A* 1z89_A* 1z8a_A* 2dux_A* 2duz_A* 2dv0_A* 2fz8_A* 2fz9_A* 2fzb_A* 2fzd_A* 2hv5_A* 2hvn_A* 2hvo_A* 2i16_A* 2i17_A* ...
Probab=100.00 E-value=7.8e-52 Score=374.68 Aligned_cols=239 Identities=18% Similarity=0.270 Sum_probs=203.7
Q ss_pred HHHHHHHHHcCCceeehHhHH-----HHHHHhc---cCCCCccceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCccc
Q 022088 11 LPLLTWLIYMGLLKISMASSS-----IEFVERG---HQSSWIRSEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLD 82 (303)
Q Consensus 11 ~~lv~~Al~~Gi~~~DtA~~y-----~~~~~~~---~~~~~r~~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iD 82 (303)
.++|+.|+++|||+||||..| +|++++. .....|+++||+||+++. ..+++.+++++++||++||+||||
T Consensus 29 ~~~l~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~~~~g~~~R~~~~I~TK~~~~--~~~~~~v~~~~~~SL~rL~~dyiD 106 (316)
T 1us0_A 29 TEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQEKLREQVVKREELFIVSKLWCT--YHEKGLVKGACQKTLSDLKLDYLD 106 (316)
T ss_dssp HHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHTTSSCGGGCEEEEEECGG--GCSHHHHHHHHHHHHHHHTCSCBS
T ss_pred HHHHHHHHHcCCCEEEcccccCCHHHHHHHHHHHHhcCCCChhHeEEEEeeCCC--cCCHHHHHHHHHHHHHHhCCCcee
Confidence 478999999999999999999 4566654 122358899999999865 568999999999999999999999
Q ss_pred EEEEecCCCC------------------CCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHc-CC--Ceeeeccc
Q 022088 83 MLQFHWWDYS------------------NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GI--PVVSNQVQ 141 (303)
Q Consensus 83 l~~lH~~~~~------------------~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~-~~--~~~~~q~~ 141 (303)
+|++|||+.. ...+.++|++|++|+++||||+||||||++++++++++. .+ +|+++|++
T Consensus 107 l~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~ 186 (316)
T 1us0_A 107 LYLIHWPTGFKPGKEFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKPAVNQIE 186 (316)
T ss_dssp EEEESSSCCBCCSSCSSCBCTTSCBCBCSCCHHHHHHHHHHHHHTTSBSCEEEESCCHHHHHHHHTCTTCCSCCSEEEEE
T ss_pred eEEEecCccccccccccccccccccccccccHHHHHHHHHHHHHCCCccEEEEecCCHHHHHHHHHhCcccCCceeeehh
Confidence 9999999641 113789999999999999999999999999999999886 45 78999999
Q ss_pred ccccccChhhhHHHHHHHhCCeEEeeccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhccCCchhHHHHHHHH
Q 022088 142 HSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTL 221 (303)
Q Consensus 142 ~n~l~~~~~~~~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 221 (303)
||++.+. .+++++|+++||++++|+||++|.++ +.... .| . .+. .+.+
T Consensus 187 ~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~l~--~~~~~--~~----~--------------------~~~--~~~l 234 (316)
T 1us0_A 187 CHPYLTQ--EKLIQYCQSKGIVVTAYSPLGSPDRP--WAKPE--DP----S--------------------LLE--DPRI 234 (316)
T ss_dssp CBTTBCC--HHHHHHHHHTTCEEEEESTTCCTTCT--TCCTT--SC----C--------------------TTT--CHHH
T ss_pred cCCccCC--HHHHHHHHHcCCEEEEecccccCccc--cccCC--Cc----c--------------------ccc--CHHH
Confidence 9999764 47999999999999999999999762 22110 00 0 000 1788
Q ss_pred HHHHHHhCCCHHHHHHHHHhhCCCCceeeeccCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhcC
Q 022088 222 KRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 287 (303)
Q Consensus 222 ~~ia~~~g~s~~qlal~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~~~~L~~e~~~~i~~~~~~~ 287 (303)
+++|+++|+|++|+||+|+++++ + ++|+|++ +++||++|+++++++|++++++.|+++....
T Consensus 235 ~~ia~~~g~s~aqvaL~w~l~~~-~-~~I~g~~--~~~~l~en~~~~~~~L~~e~~~~l~~~~~~~ 296 (316)
T 1us0_A 235 KAIAAKHNKTTAQVLIRFPMQRN-L-VVIPKSV--TPERIAENFKVFDFELSSQDMTTLLSYNRNW 296 (316)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHTT-C-EECCBCC--CHHHHHHHHCCSSCCCCHHHHHHHHTTCCCC
T ss_pred HHHHHHhCCCHHHHHHHHHHHCC-C-EEEeCCC--CHHHHHHHhhhcCCCCCHHHHHHHHhhccCC
Confidence 99999999999999999999997 3 7899999 9999999999999999999999999987553
No 29
>1vp5_A 2,5-diketo-D-gluconic acid reductase; TM1009, structural genomics, joint center for structural genomics, PSI, protein structure initiative; HET: NAP; 2.40A {Thermotoga maritima} SCOP: c.1.7.1
Probab=100.00 E-value=4.1e-52 Score=372.51 Aligned_cols=228 Identities=16% Similarity=0.206 Sum_probs=201.6
Q ss_pred HHHHHHHHHcCCceeehHhHH-----HHHHHhcc---CCCCccceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCccc
Q 022088 11 LPLLTWLIYMGLLKISMASSS-----IEFVERGH---QSSWIRSEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLD 82 (303)
Q Consensus 11 ~~lv~~Al~~Gi~~~DtA~~y-----~~~~~~~~---~~~~r~~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iD 82 (303)
.++|+.|+++|||+||||..| +|++++.. .+..|+++||+||+++. +.+++.+++++++||++||+||||
T Consensus 42 ~~~v~~Al~~Gi~~~DTA~~Yg~E~~vG~al~~~~~~~~~~R~~v~I~TK~~~~--~~~~~~v~~~~~~SL~rLg~dyiD 119 (298)
T 1vp5_A 42 EECVYEAIKVGYRLIDTAASYMNEEGVGRAIKRAIDEGIVRREELFVTTKLWVS--DVGYESTKKAFEKSLKKLQLEYID 119 (298)
T ss_dssp HHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHTTSCCGGGCEEEEEECGG--GCSSHHHHHHHHHHHHHHTCSCEE
T ss_pred HHHHHHHHHcCCCEEECCCcccCHHHHHHHHHHhhhccCCChhhEEEEeccCCC--CCCHHHHHHHHHHHHHHHCCCcEE
Confidence 478999999999999999999 45666542 12358899999999865 568899999999999999999999
Q ss_pred EEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHc-CCCeeeecccccccccChhhhHHHHHHHhC
Q 022088 83 MLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTG 161 (303)
Q Consensus 83 l~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~-~~~~~~~q~~~n~l~~~~~~~~~~~~~~~g 161 (303)
+|++|||+. + ..++|++|++|+++||||+||||||++++++++++. +++|+++|++||++++. .+++++|+++|
T Consensus 120 l~llH~p~~--~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~v~Q~~~~~~~~~--~~l~~~~~~~g 194 (298)
T 1vp5_A 120 LYLIHQPFG--D-VHCAWKAMEEMYKDGLVRAIGVSNFYPDRLMDLMVHHEIVPAVNQIEIHPFYQR--QEEIEFMRNYN 194 (298)
T ss_dssp EEEECSSCS--C-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHTT
T ss_pred EEEecCCCC--C-HHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCceEEEEecccccCC--HHHHHHHHHCC
Confidence 999999976 4 789999999999999999999999999999999986 56789999999999875 47999999999
Q ss_pred CeEEeeccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhccCCchhHHHHHHHHHHHHHHhCCCHHHHHHHHHh
Q 022088 162 VKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYIL 241 (303)
Q Consensus 162 i~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~~qlal~~~l 241 (303)
|++++|+||++|. ++...+ +.++++|+++|+|++|+||+|++
T Consensus 195 I~v~a~spL~~G~--~~~l~~------------------------------------~~l~~ia~~~g~s~aqvaL~w~l 236 (298)
T 1vp5_A 195 IQPEAWGPFAEGR--KNIFQN------------------------------------GVLRSIAEKYGKTVAQVILRWLT 236 (298)
T ss_dssp CEEEEESTTGGGG--GGGGGC------------------------------------HHHHHHHHHHTCCHHHHHHHHHH
T ss_pred CEEEEecccccCC--ccccCc------------------------------------HHHHHHHHHhCCCHHHHHHHHHH
Confidence 9999999999984 111100 67899999999999999999999
Q ss_pred hCCCCceeeeccCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhcC
Q 022088 242 DQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 287 (303)
Q Consensus 242 ~~~~v~~vi~G~~~~~~~~l~en~~a~~~~L~~e~~~~i~~~~~~~ 287 (303)
+++ + ++|+|++ +++||++|+++++++|++++++.|+++....
T Consensus 237 ~~~-v-~vI~g~~--~~~~l~enl~a~~~~Ls~e~~~~l~~~~~~~ 278 (298)
T 1vp5_A 237 QKG-I-VAIPKTV--RRERMKENISIFDFELTQEDMEKIATLDEGQ 278 (298)
T ss_dssp HTT-C-EECCCCS--CHHHHHHHHCCSSCCCCHHHHHHHHTTCCSS
T ss_pred hCC-C-EEEeCCC--CHHHHHHHHhhcCCCCCHHHHHHHHHhhccc
Confidence 996 4 7899999 9999999999999999999999999987653
No 30
>4gie_A Prostaglandin F synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: NAP; 1.25A {Trypanosoma cruzi} PDB: 4fzi_A*
Probab=100.00 E-value=4.4e-52 Score=371.70 Aligned_cols=228 Identities=20% Similarity=0.289 Sum_probs=202.4
Q ss_pred HHHHHHHHHcCCceeehHhHH-----HHHHHhccCCCCccceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEE
Q 022088 11 LPLLTWLIYMGLLKISMASSS-----IEFVERGHQSSWIRSEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQ 85 (303)
Q Consensus 11 ~~lv~~Al~~Gi~~~DtA~~y-----~~~~~~~~~~~~r~~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iDl~~ 85 (303)
.++|+.|+++|||+||||..| +|++++.. ...|++++|+||+++. ..+++.+++++++||+||||||||+|+
T Consensus 41 ~~~v~~Al~~Gin~~DTA~~YgsE~~vG~~l~~~-~~~r~~~~i~tk~~~~--~~~~~~~~~~~e~SL~rL~~dyiDly~ 117 (290)
T 4gie_A 41 ANAVRWAIEAGYRHIDTAYIYSNERGVGQGIRES-GVPREEVWVTTKVWNS--DQGYEKTLAAFERSRELLGLEYIDLYL 117 (290)
T ss_dssp HHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHH-CCCGGGSEEEEEECGG--GCSHHHHHHHHHHHHHHHTCSCEEEEE
T ss_pred HHHHHHHHHcCCCEEecccccCCHHHHHHHHHhc-CCcchhcccccccccc--CCChHHHHHHHHHHHHHhCCCceeeEE
Confidence 468999999999999999999 46676655 3457799999999876 558999999999999999999999999
Q ss_pred EecCCCCCCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHc-CCCeeeecccccccccChhhhHHHHHHHhCCeE
Q 022088 86 FHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKL 164 (303)
Q Consensus 86 lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~-~~~~~~~q~~~n~l~~~~~~~~~~~~~~~gi~v 164 (303)
+|||+.. + ..++|++|++|+++||||+||||||+++++.++... ..++.++|+++++.. .+.+++++|+++||++
T Consensus 118 lH~p~~~-~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~q~~~~~~~--~~~~l~~~~~~~gi~~ 193 (290)
T 4gie_A 118 IHWPGKK-K-FVDTWKALEKLYEEKKVRAIGVSNFEPHHLTELFKSCKIRPMVNQVELHPLF--QQRTLREFCKQHNIAI 193 (290)
T ss_dssp ECCCCSS-S-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTTCSSCCSEEEEECBTTB--CCHHHHHHHHHTTCEE
T ss_pred ecCCCCC-c-chHHHHHHHHHHHCCCcceeeecCCCHHHHHHHHHhccCCCceeeEeccccc--hhHHHHHHHHHcCceE
Confidence 9998764 3 689999999999999999999999999999999886 556788888877764 4568999999999999
Q ss_pred EeeccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhccCCchhHHHHHHHHHHHHHHhCCCHHHHHHHHHhhCC
Q 022088 165 ITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQP 244 (303)
Q Consensus 165 ia~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~~qlal~~~l~~~ 244 (303)
++|+||++|.+++.+.. +.++++|+++|+|++|+||+|++++|
T Consensus 194 ~a~spl~~G~l~~~~~~-------------------------------------~~l~~iA~~~g~t~aqvaL~w~l~~~ 236 (290)
T 4gie_A 194 TAWSPLGSGEEAGILKN-------------------------------------HVLGEIAKKHNKSPAQVVIRWDIQHG 236 (290)
T ss_dssp EEESTTCSSGGGCGGGC-------------------------------------HHHHHHHHHHTCCHHHHHHHHHHHTT
T ss_pred eeecccccccccccchh-------------------------------------HHHHHHHHHhCCCHHHHHHHHHHhCC
Confidence 99999999988765332 67899999999999999999999998
Q ss_pred CCceeeeccCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhc
Q 022088 245 AVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKK 286 (303)
Q Consensus 245 ~v~~vi~G~~~~~~~~l~en~~a~~~~L~~e~~~~i~~~~~~ 286 (303)
.| +|||++ +++||++|+++++++||++|++.|+++.+.
T Consensus 237 ~v--~I~G~~--~~~~l~eNl~a~~~~Ls~ee~~~ld~l~~~ 274 (290)
T 4gie_A 237 IV--TIPKST--NKGRIQENFNVWDFKLTEEEMRQIDELNED 274 (290)
T ss_dssp CE--ECCBCC--SHHHHHHHHCCSSCCCCHHHHHHHHTTCCC
T ss_pred CE--EEECCC--CHHHHHHHHhhcCCCCCHHHHHHHhccCCC
Confidence 54 699999 999999999999999999999999998654
No 31
>1mzr_A 2,5-diketo-D-gluconate reductase A; alpha/beta-barrel, aldo-ketoreductase, NADPH dependant, BACT targets at IGS-CNRS, france, BIGS; 2.13A {Escherichia coli} SCOP: c.1.7.1
Probab=100.00 E-value=8.7e-52 Score=370.03 Aligned_cols=228 Identities=17% Similarity=0.273 Sum_probs=200.4
Q ss_pred HHHHHHHHHcCCceeehHhHH-----HHHHHhccCCCCccceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEE
Q 022088 11 LPLLTWLIYMGLLKISMASSS-----IEFVERGHQSSWIRSEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQ 85 (303)
Q Consensus 11 ~~lv~~Al~~Gi~~~DtA~~y-----~~~~~~~~~~~~r~~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iDl~~ 85 (303)
.++|+.|+++|||+||||+.| +|++++.. +..|+++||+||+++. +. +.+++++++||+|||+||||+|+
T Consensus 52 ~~~l~~Al~~Gi~~~DTA~~Yg~E~~vG~al~~~-~~~R~~v~I~TK~~~~--~~--~~v~~~~e~SL~rLg~dyiDl~l 126 (296)
T 1mzr_A 52 ITAIQKALEVGYRSIDTAAAYKNEEGVGKALKNA-SVNREELFITTKLWND--DH--KRPREALLDSLKKLQLDYIDLYL 126 (296)
T ss_dssp HHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHS-CSCGGGCEEEEEECGG--GT--TCHHHHHHHHHHHHTCSCEEEEE
T ss_pred HHHHHHHHHcCCCEEECCccccCHHHHHHHHHhc-CCCcccEEEEeccCCC--cH--HHHHHHHHHHHHHhCCCcEEEEE
Confidence 478999999999999999999 56677653 2458899999999865 22 88999999999999999999999
Q ss_pred EecCCCCCCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHc-CCCeeeecccccccccChhhhHHHHHHHhCCeE
Q 022088 86 FHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKL 164 (303)
Q Consensus 86 lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~-~~~~~~~q~~~n~l~~~~~~~~~~~~~~~gi~v 164 (303)
+|||++......++|++|++|+++||||+||||||++++++++++. +++|+++|++||++++. .+++++|+++||++
T Consensus 127 lH~p~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~v~Q~~~~~~~~~--~~l~~~~~~~gI~v 204 (296)
T 1mzr_A 127 MHWPVPAIDHYVEAWKGMIELQKEGLIKSIGVCNFQIHHLQRLIDETGVTPVINQIELHPLMQQ--RQLHAWNATHKIQT 204 (296)
T ss_dssp ESCCCTTTCCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHSCCCSEEEEECBTTBCC--HHHHHHHHHTTCEE
T ss_pred EccCCCCcCCHHHHHHHHHHHHHCCCcCEEEEeCCCHHHHHHHHHhcCCCceEEeeecccccCC--HHHHHHHHHCCCeE
Confidence 9999874233789999999999999999999999999999999876 67889999999999875 47999999999999
Q ss_pred EeeccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhccCCchhHHHHHHHHHHHHHHhCCCHHHHHHHHHhhCC
Q 022088 165 ITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYILDQP 244 (303)
Q Consensus 165 ia~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~~qlal~~~l~~~ 244 (303)
++|+||++|.+. ...+ +.++++|+++|+|++|+||+|+++++
T Consensus 205 ~a~spL~~G~~~--~l~~------------------------------------~~l~~ia~~~g~s~aqvaL~w~l~~~ 246 (296)
T 1mzr_A 205 ESWSPLAQGGKG--VFDQ------------------------------------KVIRDLADKYGKTPAQIVIRWHLDSG 246 (296)
T ss_dssp EEESTTTTTCTT--TTTS------------------------------------HHHHHHHHHHTCCHHHHHHHHHHHTT
T ss_pred EEeccccCCcch--hcCh------------------------------------HHHHHHHHHhCCCHHHHHHHHHHhCC
Confidence 999999999531 0000 67899999999999999999999995
Q ss_pred CCceeeeccCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhcC
Q 022088 245 AVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 287 (303)
Q Consensus 245 ~v~~vi~G~~~~~~~~l~en~~a~~~~L~~e~~~~i~~~~~~~ 287 (303)
+ ++|||++ +++||++|+++++++|++++++.|+++.+..
T Consensus 247 -v-~vI~g~~--~~~~l~enl~a~~~~Ls~e~~~~l~~~~~~~ 285 (296)
T 1mzr_A 247 -L-VVIPKSV--TPSRIAENFDVWDFRLDKDELGEIAKLDQGK 285 (296)
T ss_dssp -C-EECCBCC--CHHHHHHTTCCSSCCCCHHHHHHHHTTCCCC
T ss_pred -C-EEEeCCC--CHHHHHHHHhhcCCCCCHHHHHHHHHhhhcC
Confidence 4 6899999 9999999999999999999999999987653
No 32
>1mi3_A Xylose reductase, XR; aldo-keto reductase, beta-alpha barrel, dimer, oxidoreductase; HET: NAD; 1.80A {Candida tenuis} SCOP: c.1.7.1 PDB: 1jez_A* 1k8c_A* 1ye6_A* 1ye4_A* 1sm9_A* 1r38_A* 1z9a_A*
Probab=100.00 E-value=1.8e-51 Score=373.28 Aligned_cols=242 Identities=18% Similarity=0.161 Sum_probs=201.6
Q ss_pred HHHHHHHHHcCCceeehHhHH-----HHHHHhc---cCCCCccceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCccc
Q 022088 11 LPLLTWLIYMGLLKISMASSS-----IEFVERG---HQSSWIRSEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLD 82 (303)
Q Consensus 11 ~~lv~~Al~~Gi~~~DtA~~y-----~~~~~~~---~~~~~r~~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iD 82 (303)
.++|+.|+++|||+||||..| +|++++. .....|+++||+||+++. ..+++.+++++++||+|||+||||
T Consensus 32 ~~~v~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~~~~g~~~R~~~~i~TK~~~~--~~~~~~v~~~~~~SL~rL~~dyiD 109 (322)
T 1mi3_A 32 GEQVYQAIKAGYRLFDGAEDYGNEKEVGDGVKRAIDEGLVKREEIFLTSKLWNN--YHDPKNVETALNKTLADLKVDYVD 109 (322)
T ss_dssp HHHHHHHHHTTCCEEECCGGGSCHHHHHHHHHHHHHTTSCCGGGCEEEEEECGG--GCSHHHHHHHHHHHHHHHTCSCEE
T ss_pred HHHHHHHHHcCCCEEEccccccCHHHHHHHHHHHhhcCCCChhhEEEEEeeCCC--CCCHHHHHHHHHHHHHHhCCCCee
Confidence 478999999999999999999 5666654 222458899999999865 568999999999999999999999
Q ss_pred EEEEecCCCC------------------------CCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHc-CCCeee
Q 022088 83 MLQFHWWDYS------------------------NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVS 137 (303)
Q Consensus 83 l~~lH~~~~~------------------------~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~-~~~~~~ 137 (303)
+|++|||+.. ...+.++|++|++|+++||||+||||||+.++++++++. +++|++
T Consensus 110 l~llH~p~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~ 189 (322)
T 1mi3_A 110 LFLIHFPIAFKFVPIEEKYPPGFYCGDGNNFVYEDVPILETWKALEKLVAAGKIKSIGVSNFPGALLLDLLRGATIKPAV 189 (322)
T ss_dssp EEEECCSCCBCCCCTTTCSSCTTCCSSTTCCCBCCCCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCCE
T ss_pred eEEEecCcccccCcccccccccccccccccccccCCCHHHHHHHHHHHHHcCCcCEEEEcCCCHHHHHHHHHhCCCCceE
Confidence 9999999531 113689999999999999999999999999999999886 567999
Q ss_pred ecccccccccChhhhHHHHHHHhCCeEEeeccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhccCCchhHHHH
Q 022088 138 NQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVL 217 (303)
Q Consensus 138 ~q~~~n~l~~~~~~~~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (303)
+|++||++.+. .+++++|+++||++++|+||++|.+. ......+ + ..+ ..+.
T Consensus 190 ~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~~G~~~----~~~~~~~--------------~-~~~-----~~~~-- 241 (322)
T 1mi3_A 190 LQVEHHPYLQQ--PKLIEFAQKAGVTITAYSSFGPQSFV----EMNQGRA--------------L-NTP-----TLFA-- 241 (322)
T ss_dssp EEEECBTTBCC--HHHHHHHHHTTCEEEEECTTTTHHHH----TTTCHHH--------------H-TSC-----CTTS--
T ss_pred eecccCcCcCc--HHHHHHHHHcCCEEEEECCCCCCCcc----ccccccc--------------c-cCc-----cccc--
Confidence 99999999764 57999999999999999999999322 1000000 0 000 0000
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHhhCCCCceeeeccCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhc
Q 022088 218 LQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKK 286 (303)
Q Consensus 218 ~~~l~~ia~~~g~s~~qlal~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~~~~L~~e~~~~i~~~~~~ 286 (303)
.+.++++|+++|+|++|+||+|+++++ + ++|+|++ +++||++|+++++++||+++++.|+++...
T Consensus 242 ~~~l~~iA~~~g~t~aqvaL~w~l~~~-~-~vI~g~~--~~~~l~en~~~~~~~L~~e~~~~l~~~~~~ 306 (322)
T 1mi3_A 242 HDTIKAIAAKYNKTPAEVLLRWAAQRG-I-AVIPKSN--LPERLVQNRSFNTFDLTKEDFEEIAKLDIG 306 (322)
T ss_dssp CHHHHHHHHHHTCCHHHHHHHHHHTTT-C-EECCCCC--SHHHHHHTTSCCSSCCCHHHHHHHHTTCCC
T ss_pred CHHHHHHHHHcCCCHHHHHHHHHHhCC-C-EEEcCCC--CHHHHHHHHhhcCCCcCHHHHHHHHhhccc
Confidence 178899999999999999999999998 4 7899999 999999999999999999999999998654
No 33
>1zgd_A Chalcone reductase; polyketide, deoxychalcone, isoflavonoid, biosynthesis, plant protein; HET: NAP; 1.70A {Medicago sativa}
Probab=100.00 E-value=1e-51 Score=373.12 Aligned_cols=234 Identities=19% Similarity=0.232 Sum_probs=202.3
Q ss_pred HHHHHHHHHcCCceeehHhHH-----HHHHHhc---cCCCCccceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCccc
Q 022088 11 LPLLTWLIYMGLLKISMASSS-----IEFVERG---HQSSWIRSEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLD 82 (303)
Q Consensus 11 ~~lv~~Al~~Gi~~~DtA~~y-----~~~~~~~---~~~~~r~~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iD 82 (303)
.++|+.|+++|||+||||..| +|++++. .....|+++||+||+++. +.+++.+++++++||++||+||||
T Consensus 38 ~~~v~~Al~~G~~~iDTA~~YgsE~~vG~al~~~~~~g~~~R~~~~i~TK~~~~--~~~~~~v~~~~~~SL~rL~~dyiD 115 (312)
T 1zgd_A 38 KDAIIEAIKQGYRHFDTAAAYGSEQALGEALKEAIELGLVTRDDLFVTSKLWVT--ENHPHLVIPALQKSLKTLQLDYLD 115 (312)
T ss_dssp HHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHTTSCCGGGCEEEEEECGG--GCSGGGHHHHHHHHHHHHTCSCBS
T ss_pred HHHHHHHHHcCCCEEECccccCCHHHHHHHHHHHHhcCCCcchheEEEeccCCC--CCCHHHHHHHHHHHHHHhCCCcee
Confidence 478999999999999999999 5667665 222358899999999865 568899999999999999999999
Q ss_pred EEEEecCCCC---------------CCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHc-CCCeeeecccccccc
Q 022088 83 MLQFHWWDYS---------------NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVD 146 (303)
Q Consensus 83 l~~lH~~~~~---------------~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~-~~~~~~~q~~~n~l~ 146 (303)
+|++|||+.. .....++|++|++|+++||||+||||||+.++++++++. .++|+++|++||+++
T Consensus 116 l~llH~p~~~~~~~~~~~~~~~~~~~~~~~e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~ 195 (312)
T 1zgd_A 116 LYLIHWPLSSQPGKFSFPIDVADLLPFDVKGVWESMEESLKLGLTKAIGVSNFSVKKLENLLSVATVLPAVNQVEMNLAW 195 (312)
T ss_dssp EEEECCSCEECTTCCCSSEEGGGEECCCHHHHHHHHHHHHHTTSBSCEEEESCCHHHHHHHHTTCSSCCSEEEEECBTTB
T ss_pred EEEEeccCcccCccccccccccccccccHHHHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHhCCCCceEEeeecCccc
Confidence 9999999631 123789999999999999999999999999999999886 568999999999998
Q ss_pred cChhhhHHHHHHHhCCeEEeeccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhccCCchhHHHHHHHHHHHHH
Q 022088 147 MRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIAS 226 (303)
Q Consensus 147 ~~~~~~~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~ 226 (303)
+. .+++++|+++||++++|+||++|.+.+. +.. +. .+.++++|+
T Consensus 196 ~~--~~l~~~~~~~gi~v~a~spl~~G~~~~~------~~~--------------------------~~--~~~l~~ia~ 239 (312)
T 1zgd_A 196 QQ--KKLREFCNAHGIVLTAFSPVRKGASRGP------NEV--------------------------ME--NDMLKEIAD 239 (312)
T ss_dssp CC--HHHHHHHHHTTCEEEEESTTTTTTTTSS------CTT--------------------------TT--CHHHHHHHH
T ss_pred CC--HHHHHHHHHcCCEEEEecCCCCCCCCCC------ccc--------------------------cc--cHHHHHHHH
Confidence 74 5799999999999999999998864321 000 00 168899999
Q ss_pred HhCCCHHHHHHHHHhhCCCCceeeeccCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhc
Q 022088 227 KHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKK 286 (303)
Q Consensus 227 ~~g~s~~qlal~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~~~~L~~e~~~~i~~~~~~ 286 (303)
++|+|++|+||+|+++++ + ++|||++ +++||++|+++++++|++++++.|+++...
T Consensus 240 ~~g~s~aqvaL~w~l~~~-~-~~I~g~~--~~~~l~en~~~~~~~L~~e~~~~l~~~~~~ 295 (312)
T 1zgd_A 240 AHGKSVAQISLRWLYEQG-V-TFVPKSY--DKERMNQNLRIFDWSLTKEDHEKIAQIKQN 295 (312)
T ss_dssp HHTSCHHHHHHHHHHHTT-C-EECCCCC--SHHHHHHTTCCSSCCCCHHHHHHHTTSCCC
T ss_pred HcCCCHHHHHHHHHHHCC-C-EEEeCCC--CHHHHHHHHHhccCCCCHHHHHHHHHHhcc
Confidence 999999999999999995 4 7899999 999999999999999999999999998754
No 34
>3krb_A Aldose reductase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, oxidoreductase, S genomics; HET: NAP; 1.75A {Giardia lamblia}
Probab=100.00 E-value=1.7e-51 Score=374.91 Aligned_cols=241 Identities=18% Similarity=0.187 Sum_probs=202.3
Q ss_pred HHHHHHHHHcCCceeehHhHH-----HHHHHhc---c--CCCCccceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCc
Q 022088 11 LPLLTWLIYMGLLKISMASSS-----IEFVERG---H--QSSWIRSEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPC 80 (303)
Q Consensus 11 ~~lv~~Al~~Gi~~~DtA~~y-----~~~~~~~---~--~~~~r~~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~ 80 (303)
.++|+.|+++|||+||||..| +|++++. . .+..|+++||+||+++. +.+++.+++++++||++||+||
T Consensus 41 ~~~v~~Al~~Gi~~~DTA~~YgsE~~vG~al~~~~~~~~~g~~R~~v~I~TK~~~~--~~~~~~v~~~~e~SL~rLg~dy 118 (334)
T 3krb_A 41 QTAVETALMTGYRHIDCAYVYQNEEAIGRAFGKIFKDASSGIKREDVWITSKLWNY--NHRPELVREQCKKTMSDLQVDY 118 (334)
T ss_dssp HHHHHHHHHHTCCEEECCGGGSCHHHHHHHHHHHHHCTTSSCCGGGCEEEEEECGG--GCSGGGHHHHHHHHHHHHTCSC
T ss_pred HHHHHHHHHcCCCEEECcccccCHHHHHHHHHHHhhhccCCCChhhEEEEeeeCCC--CCCHHHHHHHHHHHHHHcCCCc
Confidence 478999999999999999999 5666652 1 02468899999999875 5689999999999999999999
Q ss_pred ccEEEEecCCCCC--------------------CcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHc-CCCeeeec
Q 022088 81 LDMLQFHWWDYSN--------------------PGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQ 139 (303)
Q Consensus 81 iDl~~lH~~~~~~--------------------~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~-~~~~~~~q 139 (303)
||+|++|||+... ....++|++|++|+++||||+||||||++++++++++. +++|+++|
T Consensus 119 iDl~llH~p~~~~~~~~~~~~~~d~~g~~~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q 198 (334)
T 3krb_A 119 LDLFLVHWPLAFVRNDVGDLFPKDAEGRAMLEKVPLADTWRAMEQLVEEGLVKHIGVSNYTVPLLADLLNYAKIKPLVNQ 198 (334)
T ss_dssp EEEEEECCSCCBCCCTTCCSSCBCTTSCBCBCCCCHHHHHHHHHHHHHHTSEEEEEEESCCHHHHHHHHHHCSSCCSEEE
T ss_pred eeEEEEccccccccccccccCcccccccccccCCCHHHHHHHHHHHHHcCCccEEEEecCCHHHHHHHHHhCCCceEEee
Confidence 9999999994311 23789999999999999999999999999999999886 56899999
Q ss_pred ccccccccChhhhHHHHHHHhCCeEEeeccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhccCCchhHHHHHH
Q 022088 140 VQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQ 219 (303)
Q Consensus 140 ~~~n~l~~~~~~~~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (303)
++||++++. .+++++|+++||++++|+||++|+|++++..+.. .+ +.+. .+
T Consensus 199 ~~~~~~~~~--~~l~~~c~~~gI~v~ayspL~~G~L~~~~~~~~~-~~------------------------~~~~--~~ 249 (334)
T 3krb_A 199 IEIHPWHPN--DATVKFCLDNGIGVTAYSPMGGSYADPRDPSGTQ-KN------------------------VILE--CK 249 (334)
T ss_dssp EECBTTBCC--HHHHHHHHHTTCEEEEESTTCCSBC-------CC-BC------------------------GGGG--CH
T ss_pred eecCccccc--HHHHHHHHHcCCEEEEEecCCCCcccCCCCCCCc-cc------------------------chhc--cH
Confidence 999999764 5899999999999999999999999987643200 00 0111 27
Q ss_pred HHHHHHHHhCCCHHHHHH-----HHHhhCCCCceeeeccCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhcC
Q 022088 220 TLKRIASKHGVSIPVVAV-----RYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 287 (303)
Q Consensus 220 ~l~~ia~~~g~s~~qlal-----~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~~~~L~~e~~~~i~~~~~~~ 287 (303)
.++++|+++|+|++|+|| +|+++ + .++|||++ +++||++|+++++++||+++++.|+++.+..
T Consensus 250 ~l~~iA~~~g~s~aqvaLaw~~~~w~l~-~--~~vI~gs~--~~~~l~en~~a~~~~Ls~ee~~~l~~l~~~~ 317 (334)
T 3krb_A 250 TLKAIADAKGTSPHCVALAWHVKKWNTS-M--YSVIPKSQ--TPARIEANFKCTEVQLSDDDMDAINNIHLNK 317 (334)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHHHHSCST-T--EEECCBCS--SHHHHHHHGGGGGCCCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhCcCHHHhHHhhHhhhhhcC-C--eEEeeCCC--CHHHHHHHHhhcCCCCCHHHHHHHHHhhcCC
Confidence 899999999999999999 77777 3 67899999 9999999999999999999999999998765
No 35
>3h7u_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.25A {Arabidopsis thaliana}
Probab=100.00 E-value=4.4e-51 Score=372.14 Aligned_cols=235 Identities=19% Similarity=0.227 Sum_probs=201.4
Q ss_pred HHHHHHHHHcCCceeehHhHH-----HHHHHhcc---CCCCccceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCccc
Q 022088 11 LPLLTWLIYMGLLKISMASSS-----IEFVERGH---QSSWIRSEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLD 82 (303)
Q Consensus 11 ~~lv~~Al~~Gi~~~DtA~~y-----~~~~~~~~---~~~~r~~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iD 82 (303)
.++|+.|+++|||+||||+.| +|++++.. ....|+++||+||+++. +.+++.+++++++||+|||+||||
T Consensus 52 ~~~v~~Al~~Gi~~~DTA~~YgsE~~lG~al~~~~~~g~~~R~~v~I~TK~~~~--~~~~~~v~~~~e~SL~rLg~dyiD 129 (335)
T 3h7u_A 52 GDAVAAAVKIGYRHIDCAQIYGNEKEIGAVLKKLFEDRVVKREDLFITSKLWCT--DHDPQDVPEALNRTLKDLQLEYVD 129 (335)
T ss_dssp HHHHHHHHHHTCCEEECCGGGSCHHHHHHHHHHHHHTTSCCGGGCEEEEEECGG--GCSTTHHHHHHHHHHHHHTCSCBS
T ss_pred HHHHHHHHHcCCCEEECCcccCCHHHHHHHHHHHHhcCCCCcceeEEEeeeCCC--CCCHHHHHHHHHHHHHHcCCCcee
Confidence 478999999999999999999 55666542 22358899999999865 568899999999999999999999
Q ss_pred EEEEecCCCCC-------------CcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHc-CCCeeeecccccccccC
Q 022088 83 MLQFHWWDYSN-------------PGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMR 148 (303)
Q Consensus 83 l~~lH~~~~~~-------------~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~-~~~~~~~q~~~n~l~~~ 148 (303)
+|+||||+... ...+++|++|++|+++||||+||||||++++++++++. .++|+++|++||++++.
T Consensus 130 l~llH~p~~~~~~~~~~~~~~~~~~~~~e~~~aL~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~ 209 (335)
T 3h7u_A 130 LYLIHWPARIKKGSVGIKPENLLPVDIPSTWKAMEALYDSGKARAIGVSNFSTKKLADLLELARVPPAVNQVECHPSWRQ 209 (335)
T ss_dssp EEEECSSCEECSSCSSCCGGGEECCCHHHHHHHHHHHHHTTSBSSEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC
T ss_pred EEEEcCCCccccccccccccccccCCHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCeEEEecccccccCC
Confidence 99999996421 23789999999999999999999999999999999886 56899999999999875
Q ss_pred hhhhHHHHHHHhCCeEEeeccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhccCCchhHHHHHHHHHHHHHHh
Q 022088 149 PQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKH 228 (303)
Q Consensus 149 ~~~~~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~ 228 (303)
.+++++|+++||++++|+||++|.+. +... + .+. .+.++++|+++
T Consensus 210 --~~l~~~~~~~gI~v~a~sPL~~g~~~--~~~~----~-------------------------~~~--~~~l~~iA~~~ 254 (335)
T 3h7u_A 210 --TKLQEFCKSKGVHLSAYSPLGSPGTT--WLKS----D-------------------------VLK--NPILNMVAEKL 254 (335)
T ss_dssp --HHHHHHHHHHTCEEEEESTTCCTTCT--TSCC----C-------------------------GGG--CHHHHHHHHHH
T ss_pred --HHHHHHHHHCCCEEEEeccCcCCCCC--CCCc----c-------------------------ccc--cHHHHHHHHHH
Confidence 57999999999999999999986321 0000 0 000 16899999999
Q ss_pred CCCHHHHHHHHHhhCCCCceeeeccCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhc
Q 022088 229 GVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKK 286 (303)
Q Consensus 229 g~s~~qlal~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~~~~L~~e~~~~i~~~~~~ 286 (303)
|+|++|+||+|+++++ .++|||++ +++||++|+++++++|++++++.|+++.+.
T Consensus 255 g~t~aqvaL~w~l~~~--~~vI~g~~--~~~~l~enl~a~~~~L~~e~~~~i~~l~~~ 308 (335)
T 3h7u_A 255 GKSPAQVALRWGLQMG--HSVLPKST--NEGRIKENFNVFDWSIPDYMFAKFAEIEQA 308 (335)
T ss_dssp TCCHHHHHHHHHHHTT--CEECCBCS--CHHHHHHHHCCSSCCCCHHHHHHGGGSCCC
T ss_pred CcCHHHHHHHHHHHCC--CEEEeCCC--CHHHHHHHHhhCCCCcCHHHHHHHHhHhhc
Confidence 9999999999999998 57899999 999999999999999999999999998654
No 36
>3h7r_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.40A {Arabidopsis thaliana}
Probab=100.00 E-value=2.5e-51 Score=373.07 Aligned_cols=236 Identities=19% Similarity=0.230 Sum_probs=202.4
Q ss_pred cHHHHHHHHHcCCceeehHhHH-----HHHHHhcc---CCCCccceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCcc
Q 022088 10 DLPLLTWLIYMGLLKISMASSS-----IEFVERGH---QSSWIRSEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCL 81 (303)
Q Consensus 10 ~~~lv~~Al~~Gi~~~DtA~~y-----~~~~~~~~---~~~~r~~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~i 81 (303)
..++|+.|+++|||+||||+.| +|++++.. ....|+++||+||+++. +.+++.+++++++||+|||+|||
T Consensus 47 ~~~~v~~Al~~Gi~~~DTA~~YgsE~~lG~al~~~~~~g~~~R~~v~I~TK~~~~--~~~~~~i~~~~e~SL~rLg~dyi 124 (331)
T 3h7r_A 47 VATAIEQAIKIGYRHIDCASIYGNEKEIGGVLKKLIGDGFVKREELFITSKLWSN--DHLPEDVPKALEKTLQDLQIDYV 124 (331)
T ss_dssp CHHHHHHHHHHTCCEEECCGGGSCHHHHHHHHHHHHHTTSSCGGGCEEEEEECGG--GCSTTHHHHHHHHHHHHHTCSCB
T ss_pred HHHHHHHHHHcCCCEEECccccCCHHHHHHHHHHHhhcCCCCchhEEEEEeeCCC--CCCHHHHHHHHHHHHHHcCCCee
Confidence 3578999999999999999999 56666642 11258899999999865 56889999999999999999999
Q ss_pred cEEEEecCCCC-------------CCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHc-CCCeeeeccccccccc
Q 022088 82 DMLQFHWWDYS-------------NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDM 147 (303)
Q Consensus 82 Dl~~lH~~~~~-------------~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~-~~~~~~~q~~~n~l~~ 147 (303)
|+|++|||+.. ....+++|++|++|+++||||+||||||+.++++++++. .++|+++|++||++.+
T Consensus 125 Dl~llH~p~~~~~~~~~~~~~~~~~~~~~e~~~aL~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~ 204 (331)
T 3h7r_A 125 DLYLIHWPASLKKESLMPTPEMLTKPDITSTWKAMEALYDSGKARAIGVSNFSSKKLTDLLNVARVTPAVNQVECHPVWQ 204 (331)
T ss_dssp SEEEECCSCEECTTCSSCCGGGEECCCHHHHHHHHHHHHHTTSBSSEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBC
T ss_pred EEEEEecCcccccccccccccccccCCHHHHHHHHHHHHHcCCCcEEEecCCCHHHHHHHHHhcCCCceeEEeecccccC
Confidence 99999999642 123789999999999999999999999999999999886 5689999999999977
Q ss_pred ChhhhHHHHHHHhCCeEEeeccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhccCCchhHHHHHHHHHHHHHH
Q 022088 148 RPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASK 227 (303)
Q Consensus 148 ~~~~~~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~ 227 (303)
. .+++++|+++||++++|+||++|-.. +.. . +.+. .+.++++|++
T Consensus 205 ~--~~l~~~~~~~gI~v~a~spL~~g~~~-----------~~~-------~-------------~~~~--~~~l~~iA~~ 249 (331)
T 3h7r_A 205 Q--QGLHELCKSKGVHLSGYSPLGSQSKG-----------EVR-------L-------------KVLQ--NPIVTEVAEK 249 (331)
T ss_dssp C--HHHHHHHHHHTCEEEEESTTSCSCTT-----------TTT-------H-------------HHHT--CHHHHHHHHH
T ss_pred C--HHHHHHHHHCCCEEEEeCCCCCCCCC-----------CCc-------c-------------chhc--CHHHHHHHHH
Confidence 5 58999999999999999999986210 000 0 0111 2789999999
Q ss_pred hCCCHHHHHHHHHhhCCCCceeeeccCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhc
Q 022088 228 HGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKK 286 (303)
Q Consensus 228 ~g~s~~qlal~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~~~~L~~e~~~~i~~~~~~ 286 (303)
+|+|++|+||+|+++++ .++|||++ +++||++|+++++++|++++++.|+++.+.
T Consensus 250 ~g~t~aqvaL~w~l~~~--~~vI~g~~--~~~~l~en~~a~~~~L~~ee~~~l~~l~~~ 304 (331)
T 3h7r_A 250 LGKTTAQVALRWGLQTG--HSVLPKSS--SGARLKENLDVFDWSIPEDLFTKFSNIPQE 304 (331)
T ss_dssp HTCCHHHHHHHHHHHTT--CEECCCCS--CHHHHHHHTCCSSCCCCHHHHGGGGGSCCC
T ss_pred HCcCHHHHHHHHHHHCC--CEEEeCCC--CHHHHHHHHhhCCCCcCHHHHHHHHHhhhc
Confidence 99999999999999998 57899999 999999999999999999999999998754
No 37
>2bgs_A Aldose reductase; holoenzyme, aldo/keto reductase, oxidoreductase; HET: NDP; 1.64A {Hordeum vulgare} PDB: 2bgq_A* 2vdg_A*
Probab=100.00 E-value=1.2e-50 Score=369.91 Aligned_cols=231 Identities=14% Similarity=0.201 Sum_probs=200.9
Q ss_pred HHHHHHHHH-cCCceeehHhHH-----HHHHHhcc--CCCCccceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCccc
Q 022088 11 LPLLTWLIY-MGLLKISMASSS-----IEFVERGH--QSSWIRSEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLD 82 (303)
Q Consensus 11 ~~lv~~Al~-~Gi~~~DtA~~y-----~~~~~~~~--~~~~r~~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iD 82 (303)
.++|+.|++ +|||+||||..| +|++++.. ....|+++||+||+++. ..+++.+++++++||++|||||||
T Consensus 63 ~~~l~~Al~~~Gi~~iDTA~~Yg~E~~vG~al~~~~~~g~~R~~v~I~TK~~~~--~~~~~~v~~ale~SL~rLg~dyID 140 (344)
T 2bgs_A 63 AHSVRTAITEAGYRHVDTAAEYGVEKEVGKGLKAAMEAGIDRKDLFVTSKIWCT--NLAPERVRPALENTLKDLQLDYID 140 (344)
T ss_dssp HHHHHHHHHTTCCCEEECCGGGTCHHHHHHHHHHHHHTTCCGGGCEEEEEECGG--GCSHHHHHHHHHHHHHHHTCSCEE
T ss_pred HHHHHHHHHhcCCCEEECCCccCCHHHHHHHHHHhhhcCCCcccEEEEeccCCC--CCCHHHHHHHHHHHHHHhCCCcEE
Confidence 578999999 999999999999 45666541 11458899999999865 568999999999999999999999
Q ss_pred EEEEecCCCC--------------CCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHc-CCCeeeeccccccccc
Q 022088 83 MLQFHWWDYS--------------NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDM 147 (303)
Q Consensus 83 l~~lH~~~~~--------------~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~-~~~~~~~q~~~n~l~~ 147 (303)
+|+||||+.. .....++|++|++|+++||||+||||||++++++++++. +++|+++|++||++.+
T Consensus 141 l~llH~p~~~~~~~~~~~~~~~~~~~~~~e~~~aLe~l~~~GkIr~iGvSn~~~~~l~~~~~~~~i~p~v~Q~e~~~~~~ 220 (344)
T 2bgs_A 141 LYHIHWPFRLKDGAHMPPEAGEVLEFDMEGVWKEMENLVKDGLVKDIGVCNYTVTKLNRLLRSAKIPPAVCQMEMHPGWK 220 (344)
T ss_dssp EEEESSSCEECTTCCSSCCTTCEECCCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBC
T ss_pred EEEEecCCccccccccccccccccCCCHHHHHHHHHHHHHcCCccEEEEecCCHHHHHHHHHhcCCCceeeecccCcccC
Confidence 9999999631 113789999999999999999999999999999999886 5679999999999976
Q ss_pred ChhhhHHHHHHHhCCeEEeeccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhccCCchhHHHHHHHHHHHHHH
Q 022088 148 RPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASK 227 (303)
Q Consensus 148 ~~~~~~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~ 227 (303)
. .+++++|+++||++++|+||++|- . .. +. .+.++++|++
T Consensus 221 ~--~~ll~~~~~~gI~v~a~spL~~G~------~----~~--------------------------~~--~~~l~~iA~~ 260 (344)
T 2bgs_A 221 N--DKIFEACKKHGIHITAYSPLGSSE------K----NL--------------------------AH--DPVVEKVANK 260 (344)
T ss_dssp C--HHHHHHHHHTTCEEEEESTTCTTT------T----CC--------------------------TT--CHHHHHHHHH
T ss_pred c--HHHHHHHHHCCCEEEEeCcccCCC------c----hh--------------------------hc--cHHHHHHHHH
Confidence 4 579999999999999999999981 0 00 00 1688999999
Q ss_pred hCCCHHHHHHHHHhhCCCCceeeeccCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhcC
Q 022088 228 HGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKG 287 (303)
Q Consensus 228 ~g~s~~qlal~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~~~~L~~e~~~~i~~~~~~~ 287 (303)
+|+|++|+||+|+++++ .++|||++ +++||++|+++++++||+++++.|+++.+..
T Consensus 261 ~g~s~aqvaL~w~l~~~--~~vI~gs~--~~~~l~eNl~a~~~~Ls~ee~~~l~~l~~~~ 316 (344)
T 2bgs_A 261 LNKTPGQVLIKWALQRG--TSVIPKSS--KDERIKENIQVFGWEIPEEDFKVLCSIKDEK 316 (344)
T ss_dssp HTCCHHHHHHHHHHHHT--CEECCBCS--SHHHHHHTTCCSSCCCCHHHHHHHHHSCTTC
T ss_pred hCCCHHHHHHHHHHhCC--CeEEECCC--CHHHHHHHHHhcCCCCCHHHHHHHHHHhhcC
Confidence 99999999999999998 37899999 9999999999999999999999999997654
No 38
>3b3d_A YTBE protein, putative morphine dehydrogenase; aldo-keto reductase, oxidoreductase; 2.30A {Bacillus subtilis}
Probab=100.00 E-value=6.7e-51 Score=367.82 Aligned_cols=226 Identities=20% Similarity=0.287 Sum_probs=196.8
Q ss_pred HHHHHHHHHcCCceeehHhHHH-----HHHHhcc---CCCCccceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCccc
Q 022088 11 LPLLTWLIYMGLLKISMASSSI-----EFVERGH---QSSWIRSEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLD 82 (303)
Q Consensus 11 ~~lv~~Al~~Gi~~~DtA~~y~-----~~~~~~~---~~~~r~~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iD 82 (303)
.++|+.|+++|||+||||+.|+ |++++.. ....|++++++||+++. +.+++.+++++++||+||||||||
T Consensus 68 ~~~v~~Al~~Gi~~~DTA~~YgnE~~vG~~l~~~~~~~~i~r~~~~i~~k~~~~--~~~~~~~~~~~e~SL~rL~~dyiD 145 (314)
T 3b3d_A 68 VNAVKTAIVHGYRSIDTAAIYGNEAGVGEGIREGIEEAGISREDLFITSKVWNA--DLGYEETLAAFETSLSKLGLDYLD 145 (314)
T ss_dssp HHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHHHTCCGGGCEEEEEECGG--GCSHHHHHHHHHHHHHHHTCSCEE
T ss_pred HHHHHHHHHcCCCEEECccccCChHHHHHHHHHHHHHhCCCcccccccccCcCC--CCCHHHHHHHHHHHHHHhCCCccc
Confidence 4689999999999999999995 3433321 23457799999999876 668999999999999999999999
Q ss_pred EEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHc-CCCeeeecccccccccChhhhHHHHHHHhC
Q 022088 83 MLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTG 161 (303)
Q Consensus 83 l~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~-~~~~~~~q~~~n~l~~~~~~~~~~~~~~~g 161 (303)
+|++|||+... ..++|++|++|+++||||+||||||+.++++++... .+++.++|++++. +..+.+++++|+++|
T Consensus 146 L~~~H~~~~~~--~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~i~~~~nq~~~~~--~~~~~~ll~~c~~~g 221 (314)
T 3b3d_A 146 LYLIHWPVEGK--YKEAWRALETLYKEGRIKAIGVSNFQIHHLEDLMTAAEIKPMINQVEFHP--RLTQKELIRYCQNQG 221 (314)
T ss_dssp EEEESSCCTTT--HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHTTTCSSCCSEEEEECBT--TBCCHHHHHHHHHHT
T ss_pred ccccccccccc--hhHHHHHHHHHHHCCCEeEEEecCCchHHHHHHHHhcCCCeEEEEecccc--ccchHHHHHHHHHcC
Confidence 99999997643 579999999999999999999999999999999876 4566666666554 456678999999999
Q ss_pred CeEEeeccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhccCCchhHHHHHHHHHHHHHHhCCCHHHHHHHHHh
Q 022088 162 VKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVVAVRYIL 241 (303)
Q Consensus 162 i~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~~qlal~~~l 241 (303)
|++++|+||++|.|+++ ..+.++|+++|+|++|+||+|++
T Consensus 222 I~v~a~sPL~~G~L~~~----------------------------------------~~~~~ia~~~g~t~aqvaL~w~l 261 (314)
T 3b3d_A 222 IQMEAWSPLMQGQLLDH----------------------------------------PVLADIAQTYNKSVAQIILRWDL 261 (314)
T ss_dssp CEEEEESTTGGGTTTTC----------------------------------------HHHHHHHHHTTCCHHHHHHHHHH
T ss_pred CEEEEeccccCCcccCc----------------------------------------hhhHHHHHHcCCCHHHHHHHHHH
Confidence 99999999999998753 45678999999999999999999
Q ss_pred hCCCCceeeeccCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhc
Q 022088 242 DQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKK 286 (303)
Q Consensus 242 ~~~~v~~vi~G~~~~~~~~l~en~~a~~~~L~~e~~~~i~~~~~~ 286 (303)
++|.| +|||++ +++||++|+++++++||++|+++|+++.++
T Consensus 262 ~~~~v--~I~G~~--~~~~l~eNl~a~~~~Ls~ee~~~ld~l~~~ 302 (314)
T 3b3d_A 262 QHGII--TIPKST--KEHRIKENASVFDFELTQDDMNRIDALNEN 302 (314)
T ss_dssp HTTCE--ECCBCC--CHHHHHHHHCCSSCCCCHHHHHHHHTTCCC
T ss_pred hCCCE--EEECCC--CHHHHHHHHHhcCCCCCHHHHHHHhccCCC
Confidence 99865 699999 999999999999999999999999998654
No 39
>4gac_A Alcohol dehydrogenase [NADP(+)]; TIM barrel, aldheyde reductase AKR1A4, SMAR1, oxidoreductase; HET: FLC; 1.64A {Mus musculus} PDB: 2alr_A 3h4g_A* 3cv7_A* 3fx4_A* 1ae4_A* 1cwn_A* 1hqt_A*
Probab=100.00 E-value=7.7e-51 Score=369.56 Aligned_cols=240 Identities=16% Similarity=0.219 Sum_probs=207.0
Q ss_pred HHHHHHHHHcCCceeehHhHH-----HHHHHhcc----CCCCccceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCcc
Q 022088 11 LPLLTWLIYMGLLKISMASSS-----IEFVERGH----QSSWIRSEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCL 81 (303)
Q Consensus 11 ~~lv~~Al~~Gi~~~DtA~~y-----~~~~~~~~----~~~~r~~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~i 81 (303)
.++|+.|+++|||+||||..| +|+++++. ....|+++++++|+++. +.+++.+++++++||+|||+|||
T Consensus 29 ~~~i~~Al~~Gin~~DTA~~YgsE~~vG~al~~~~~~~~~~~r~~~~~~~~~~~~--~~~~~~i~~~~~~SL~rL~~dyi 106 (324)
T 4gac_A 29 KAAIKHALSAGYRHIDCASVYGNETEIGEALKESVGSGKAVPREELFVTSKLWNT--KHHPEDVEPALRKTLADLQLEYL 106 (324)
T ss_dssp HHHHHHHHHTTCCEEECCGGGSCHHHHHHHHHHHBSTTSSBCGGGCEEEEEECGG--GCSHHHHHHHHHHHHHHHTCSCB
T ss_pred HHHHHHHHHcCCCEEECCcccCCHHHHHHHHHhhhcccceecccccccccccCCC--CCCHHHHHHHHHHHHHHhCCCcc
Confidence 468999999999999999999 46666543 12357799999999876 66899999999999999999999
Q ss_pred cEEEEecCCCC------------------CCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHc-CCCeeeecccc
Q 022088 82 DMLQFHWWDYS------------------NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQH 142 (303)
Q Consensus 82 Dl~~lH~~~~~------------------~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~-~~~~~~~q~~~ 142 (303)
|+|++|||+.. ...++++|++|++|+++||||+||||||++++++++... .+++.++|++|
T Consensus 107 Dl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~q~~~ 186 (324)
T 4gac_A 107 DLYLMHWPYAFERGDNPFPKNADGTVRYDSTHYKETWKALEVLVAKGLVKALGLSNFNSRQIDDVLSVASVRPAVLQVEC 186 (324)
T ss_dssp SEEEESCSSEECSSSCSSCBCTTSCBCEECCCHHHHHHHHHHHHHTTSBSCEEEESCCHHHHHHHHHHCSSCCCEEEEEC
T ss_pred ceeeeccCcccccccccccccccCccccCCCCHHHHHHHHHHHHHCCCeeEecCCCCCHHHHHHHHHhCCCCcceeeecc
Confidence 99999998631 123789999999999999999999999999999999876 67899999999
Q ss_pred cccccChhhhHHHHHHHhCCeEEeeccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhccCCchhHHHHHHHHH
Q 022088 143 SVVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLK 222 (303)
Q Consensus 143 n~l~~~~~~~~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 222 (303)
|++.. +.+++++|+++||++++|+||++|.+++++... + .... .+.++
T Consensus 187 ~~~~~--~~~l~~~~~~~gi~~~a~spL~~g~~~~~~~~~----~------------------------~~~~--~~~l~ 234 (324)
T 4gac_A 187 HPYLA--QNELIAHCHARGLEVTAYSPLGSSDRAWRHPDE----P------------------------VLLE--EPVVL 234 (324)
T ss_dssp BTTBC--CHHHHHHHHHHTCEEEEESTTCCGGGGGGSTTS----C------------------------CGGG--CHHHH
T ss_pred Cchhh--HHHHHHHHHHhceeeeecCCcccCccccCCCCC----c------------------------chhh--HHHHH
Confidence 99855 457999999999999999999999998876543 1 0000 16789
Q ss_pred HHHHHhCCCHHHHHHHHHhhCCCCceeeeccCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhcCC
Q 022088 223 RIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGK 288 (303)
Q Consensus 223 ~ia~~~g~s~~qlal~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~~~~L~~e~~~~i~~~~~~~~ 288 (303)
++|+++|+|++|+||+|+++++.| +|+|++ +++||+||+++++++||+||+++|+++.++.+
T Consensus 235 ~iA~~~g~t~aqvaL~w~l~~~~v--~I~G~~--~~~~l~eN~~a~~~~Ls~ee~~~id~l~~~~R 296 (324)
T 4gac_A 235 ALAEKHGRSPAQILLRWQVQRKVI--CIPKSI--NPSRILQNIQVFDFTFSPEEMKQLDALNKNWR 296 (324)
T ss_dssp HHHHHHTCCHHHHHHHHHHHTTCE--ECCBCC--CHHHHHHHTCCSSCCCCHHHHHHHHTTCCCCC
T ss_pred HHHHHhCCCHHHHHHHHHHHCCCE--EEECCC--CHHHHHHHHhhCCCCCCHHHHHHHhccCcCCC
Confidence 999999999999999999999854 799999 99999999999999999999999999876543
No 40
>4exb_A Putative uncharacterized protein; aldo-keto reductase, NADP+ binding, oxidoreducta; 2.75A {Pseudomonas aeruginosa} PDB: 4exa_A
Probab=100.00 E-value=6.7e-50 Score=357.65 Aligned_cols=205 Identities=18% Similarity=0.152 Sum_probs=177.5
Q ss_pred HHHHHHHHHcCCceeehHhHHH------HHHHhccCCCCccceEEEccccCC------CCCCCHHHHHHHHHHHHhhcCC
Q 022088 11 LPLLTWLIYMGLLKISMASSSI------EFVERGHQSSWIRSEGDLTKWVPP------PVKMTSSIVRESIDVSRRRMDV 78 (303)
Q Consensus 11 ~~lv~~Al~~Gi~~~DtA~~y~------~~~~~~~~~~~r~~~~I~tK~~~~------~~~~~~~~i~~sve~SL~~Lg~ 78 (303)
.++|+.|+++|||+||||+.|+ |++++. .|+++||+||+++. ..+.+++.+++++++||+|||+
T Consensus 73 ~~~l~~Al~~Gi~~~DTA~~Yg~sE~~lG~al~~----~R~~v~I~TK~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~ 148 (292)
T 4exb_A 73 ADLLALARDLGINLIDTAPAYGRSEERLGPLLRG----QREHWVIVSKVGEEFVDGQSVFDFSAAHTRRSVERSLKRLET 148 (292)
T ss_dssp HHHHHHHHHTTCCEEECCTTSTTHHHHHHHHHTT----TGGGCEEEEEESBC--CCSCCBCCCHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHcCCCEEEcCCccchHHHHHHHHhcc----CCCcEEEEEeeccccCCCCccCCCCHHHHHHHHHHHHHHhCC
Confidence 4799999999999999999995 445554 58899999999842 2357999999999999999999
Q ss_pred CcccEEEEecC--CCCCCcHH-HHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHcCCCeeeecccccccccChhhhHHH
Q 022088 79 PCLDMLQFHWW--DYSNPGYL-DALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVVDMRPQQKMAE 155 (303)
Q Consensus 79 d~iDl~~lH~~--~~~~~~~~-~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~~q~~~n~l~~~~~~~~~~ 155 (303)
||||+|++||| +...+ .. ++|++|++|+++||||+||||||++++++++++. |+++|++||++++.. .++++
T Consensus 149 dyiDl~llH~p~~d~~~~-~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~---~~~~Q~~~~~~~~~~-~~l~~ 223 (292)
T 4exb_A 149 DRIELVLVHSDGNDLDIL-ENSEVYPTLAALKREGLIGAYGLSGKTVEGGLRALRE---GDCAMVTYNLNERAE-RPVIE 223 (292)
T ss_dssp SCEEEEEEECCSCHHHHH-HHSSHHHHHHHHHHTTSEEEEEEECSSHHHHHHHHHH---SSEEEEECSSSCCTT-HHHHH
T ss_pred CceeEEEEecCCCCcccc-chHHHHHHHHHHHHCCCceEEEeCCCCHHHHHHHHHh---hcEEeeccccccCCH-HHHHH
Confidence 99999999999 44333 34 8999999999999999999999999999999886 899999999999877 68999
Q ss_pred HHHHhCCeEEeeccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhccCCchhHHHHHHHHHHHHHHhCCCHHHH
Q 022088 156 LCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQVLLQTLKRIASKHGVSIPVV 235 (303)
Q Consensus 156 ~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~~ql 235 (303)
+|+++||++++|+||++|+|++ ++|+|++|+
T Consensus 224 ~~~~~gi~v~a~spL~~G~L~~-------------------------------------------------~~g~t~aqv 254 (292)
T 4exb_A 224 YAAAHAKGILVKKALASGHACL-------------------------------------------------GAGQDPVRA 254 (292)
T ss_dssp HHHHTTCEEEEECCSCC---------------------------------------------------------CCHHHH
T ss_pred HHHHCCcEEEEeccccCCccCC-------------------------------------------------CCCCCHHHH
Confidence 9999999999999999997632 278999999
Q ss_pred HHHHHhhCCCCceeeeccCCCCHhHHHHhHhhhcCCCCHH
Q 022088 236 AVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDED 275 (303)
Q Consensus 236 al~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~~~~L~~e 275 (303)
||+|++++|.|+++|+|++ +++||++|++++++.||+|
T Consensus 255 aL~w~l~~~~v~~vI~g~~--~~~~l~en~~a~~~~Ls~~ 292 (292)
T 4exb_A 255 SFELVFDQPGVAAAIVGTI--NPLHLAHNVAMAAQALKKA 292 (292)
T ss_dssp HHHHHHHSTTCCEEEECCC--CHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHhCCCCeEEEeCCC--CHHHHHHHHHHhhccCCCC
Confidence 9999999999999999999 9999999999999888875
No 41
>3cf4_A Acetyl-COA decarboxylase/synthase alpha subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=98.26 E-value=3.7e-07 Score=91.06 Aligned_cols=96 Identities=9% Similarity=0.032 Sum_probs=72.7
Q ss_pred HHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEEec--CCCH---H----------------HHHH
Q 022088 69 IDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALT--NFDT---E----------------RLRI 127 (303)
Q Consensus 69 ve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS--~~~~---~----------------~l~~ 127 (303)
++.||++|++||+|++ +|.-+... ..++++++++++.+|+|+++|++ ++.. . ....
T Consensus 231 ~e~sL~~L~~d~vdI~-I~Ghn~~~--~~~iLeaa~~a~~~g~I~~iG~c~T~he~lr~~~~~~~~~~~pv~G~~~~~~~ 307 (807)
T 3cf4_A 231 VEIGMGTIDKSKPFLC-VIGHNVAG--VTYMMDYMEDNNLTDKMEIAGLCCTAIDLTRYKEADRRPPYAKVIGSMSKELK 307 (807)
T ss_dssp EEESGGGSCTTSCEEE-EESSCCHH--HHHHHHHHHHTTCTTTSEEEEESHHHHHHTTTTCTTCCCCCSEEEESGGGHHH
T ss_pred eeccccccCCCCceEE-EECCcCcc--HHHHHHHHHHCCCCCCCcEEeeccCCCchhhccccccccccccccccHHHHHH
Confidence 6678999999999995 87543322 36889999999999999999554 3333 0 2233
Q ss_pred HHHcCCCeeeecccccccccChhhhHHHHHHHhCCeEEeeccccc
Q 022088 128 ILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMG 172 (303)
Q Consensus 128 ~~~~~~~~~~~q~~~n~l~~~~~~~~~~~~~~~gi~via~spl~~ 172 (303)
++.. ..++++++.||..++ ++++.|.++|++|++.+|..+
T Consensus 308 ~i~t-Ga~dv~vV~~n~i~~----~ll~~a~~~Gm~Vit~sp~~~ 347 (807)
T 3cf4_A 308 VIRS-GMPDVIVVDEQCVRG----DIVPEAQKLKIPVIASNPKIM 347 (807)
T ss_dssp HHHH-TCCSEEEECSSSCCT----THHHHHHHTTCCEEECSTTCC
T ss_pred Hhhc-CCCeEEEEEecCCCh----HHHHHHHHCCCEEEEechhhh
Confidence 3444 358999999998742 678999999999999999876
No 42
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=88.91 E-value=7.9 Score=32.91 Aligned_cols=75 Identities=13% Similarity=0.022 Sum_probs=60.4
Q ss_pred CCCCCHHHHHHHHHHHHh-hcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHcC
Q 022088 57 PVKMTSSIVRESIDVSRR-RMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENG 132 (303)
Q Consensus 57 ~~~~~~~~i~~sve~SL~-~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~~ 132 (303)
.+..+.+...+-.+-..+ -+|+++|=+..+..+....++..+++++.++|+++|..-. =+++.++...+++.+.+
T Consensus 81 ag~~ta~eAv~~a~lare~~~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~Vl-py~~dd~~~akrl~~~G 156 (265)
T 1wv2_A 81 AGCYDAVEAVRTCRLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVM-VYTSDDPIIARQLAEIG 156 (265)
T ss_dssp TTCCSHHHHHHHHHHHHTTTTSCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTTCEEE-EEECSCHHHHHHHHHSC
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCeEEEEeecCccccCcCHHHHHHHHHHHHHCCCEEE-EEeCCCHHHHHHHHHhC
Confidence 346788888888888888 8899999998887777777888999999999999997533 34666787777777764
No 43
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=84.52 E-value=2.7 Score=36.38 Aligned_cols=108 Identities=6% Similarity=0.064 Sum_probs=64.7
Q ss_pred CCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHcCCCeeeec
Q 022088 60 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQ 139 (303)
Q Consensus 60 ~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~~q 139 (303)
++.+ -+..+=+.|.++|+++|.+-....+... +.+.+.++.+..+.+...++...+. .+.+.++.+.+.+.+...+-
T Consensus 23 ~~~e-~k~~i~~~L~~~Gv~~IE~g~~~~~~~~-p~~~~~~e~~~~i~~~~~~~v~~l~-~n~~~i~~a~~~G~~~V~i~ 99 (295)
T 1ydn_A 23 VPTA-DKIALINRLSDCGYARIEATSFVSPKWV-PQLADSREVMAGIRRADGVRYSVLV-PNMKGYEAAAAAHADEIAVF 99 (295)
T ss_dssp CCHH-HHHHHHHHHTTTTCSEEEEEECSCTTTC-GGGTTHHHHHHHSCCCSSSEEEEEC-SSHHHHHHHHHTTCSEEEEE
T ss_pred cCHH-HHHHHHHHHHHcCcCEEEEccCcCcccc-ccccCHHHHHHHHHhCCCCEEEEEe-CCHHHHHHHHHCCCCEEEEE
Confidence 4544 4556666778999999998755443311 2223556666666655567766665 56788888888765432222
Q ss_pred ccccc------cccCh------hhhHHHHHHHhCCeEEeeccc
Q 022088 140 VQHSV------VDMRP------QQKMAELCQLTGVKLITYGTV 170 (303)
Q Consensus 140 ~~~n~------l~~~~------~~~~~~~~~~~gi~via~spl 170 (303)
..-|- +.+.. -.+.+++|++.|+.+.++-..
T Consensus 100 ~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~ 142 (295)
T 1ydn_A 100 ISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSC 142 (295)
T ss_dssp EESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred EecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEE
Confidence 11120 01121 245689999999998765443
No 44
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=75.98 E-value=28 Score=30.00 Aligned_cols=107 Identities=11% Similarity=0.101 Sum_probs=62.4
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHcCCCeeee
Q 022088 59 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSN 138 (303)
Q Consensus 59 ~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~~ 138 (303)
.++.+ -+..+=+.|.++|+++|.+-....|.. .+.+.+.++.+..+.+...++..+.. .+.+.++.+++.+.+...+
T Consensus 26 ~~~~e-~k~~i~~~L~~~Gv~~IE~g~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~l~-~~~~~i~~a~~aG~~~v~i 102 (302)
T 2ftp_A 26 PIEVA-DKIRLVDDLSAAGLDYIEVGSFVSPKW-VPQMAGSAEVFAGIRQRPGVTYAALA-PNLKGFEAALESGVKEVAV 102 (302)
T ss_dssp CCCHH-HHHHHHHHHHHTTCSEEEEEECSCTTT-CGGGTTHHHHHHHSCCCTTSEEEEEC-CSHHHHHHHHHTTCCEEEE
T ss_pred CCCHH-HHHHHHHHHHHcCcCEEEECCCcCccc-cccccCHHHHHHHhhhcCCCEEEEEe-CCHHHHHHHHhCCcCEEEE
Confidence 34544 455666788999999999987544421 12122333334444444566666665 4778888888876543222
Q ss_pred ccccccc------ccCh------hhhHHHHHHHhCCeEEeec
Q 022088 139 QVQHSVV------DMRP------QQKMAELCQLTGVKLITYG 168 (303)
Q Consensus 139 q~~~n~l------~~~~------~~~~~~~~~~~gi~via~s 168 (303)
-..-|-. +... -.+.+++|+++|+.+.++-
T Consensus 103 ~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l 144 (302)
T 2ftp_A 103 FAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYI 144 (302)
T ss_dssp EEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 1222111 1111 2578999999999987543
No 45
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=71.88 E-value=46 Score=28.79 Aligned_cols=106 Identities=15% Similarity=0.162 Sum_probs=62.2
Q ss_pred CCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHcCCCeeeec
Q 022088 60 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQ 139 (303)
Q Consensus 60 ~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~~q 139 (303)
++.+ -+..+-+.|.++|+++|.+-..-.|.. .+.+.+..+.+..+.+...++..++. -+...++.+.+.+.+...+-
T Consensus 25 ~~~e-~k~~i~~~L~~~Gv~~IE~g~~~~~~~-~p~~~d~~~~~~~~~~~~~~~~~~l~-~~~~~i~~a~~~g~~~v~i~ 101 (307)
T 1ydo_A 25 IATE-DKITWINQLSRTGLSYIEITSFVHPKW-IPALRDAIDVAKGIDREKGVTYAALV-PNQRGLENALEGGINEACVF 101 (307)
T ss_dssp CCHH-HHHHHHHHHHTTTCSEEEEEECSCTTT-CGGGTTHHHHHHHSCCCTTCEEEEEC-CSHHHHHHHHHHTCSEEEEE
T ss_pred CCHH-HHHHHHHHHHHcCCCEEEECCCcCccc-ccccCCHHHHHHHhhhcCCCeEEEEe-CCHHhHHHHHhCCcCEEEEE
Confidence 3444 455666788999999999987655431 12122233334444444566666666 46778888888765432222
Q ss_pred cccccc------ccCh------hhhHHHHHHHhCCeEEeec
Q 022088 140 VQHSVV------DMRP------QQKMAELCQLTGVKLITYG 168 (303)
Q Consensus 140 ~~~n~l------~~~~------~~~~~~~~~~~gi~via~s 168 (303)
..-|-. ++.. -.+.++++++.|+.+.++-
T Consensus 102 ~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i 142 (307)
T 1ydo_A 102 MSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYL 142 (307)
T ss_dssp EESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred eecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEE
Confidence 222211 1111 1467899999999887543
No 46
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=70.98 E-value=37 Score=30.20 Aligned_cols=142 Identities=11% Similarity=-0.038 Sum_probs=84.9
Q ss_pred HHHHHHHHcCCceeehH----hHHHH---HHHhccCCCCccceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCcccEE
Q 022088 12 PLLTWLIYMGLLKISMA----SSSIE---FVERGHQSSWIRSEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDML 84 (303)
Q Consensus 12 ~lv~~Al~~Gi~~~DtA----~~y~~---~~~~~~~~~~r~~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iDl~ 84 (303)
+..+.+.+.|++.|..- ....- +..++..+ ++-|.-+.. ..++.+...+-++ .|+.+|+++|
T Consensus 153 ~~a~~~~~~Gf~~iKik~g~~~~~~~e~v~avr~a~g----d~~l~vD~n---~~~~~~~a~~~~~-~l~~~~i~~i--- 221 (384)
T 2pgw_A 153 RDAAVGHAQGERVFYLKVGRGEKLDLEITAAVRGEIG----DARLRLDAN---EGWSVHDAINMCR-KLEKYDIEFI--- 221 (384)
T ss_dssp HHHHHHHHTTCCEEEEECCSCHHHHHHHHHHHHTTST----TCEEEEECT---TCCCHHHHHHHHH-HHGGGCCSEE---
T ss_pred HHHHHHHHcCCCEEEECcCCCHHHHHHHHHHHHHHcC----CcEEEEecC---CCCCHHHHHHHHH-HHHhcCCCEE---
Confidence 34566778999988751 11111 12233222 233433442 2567776665544 6888887754
Q ss_pred EEecCCCCCCcHHHHHHHHHHHHHcCCccEEEec-CCCHHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHHHHHhCC
Q 022088 85 QFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALT-NFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGV 162 (303)
Q Consensus 85 ~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS-~~~~~~l~~~~~~~~~~~~~q~~~n~l~~-~~~~~~~~~~~~~gi 162 (303)
..|-+ .+.++.+.++++.-.|-=++.- .++++.++++++. ...+++|+..+-.-- ..-.++..+|+++|+
T Consensus 222 --EqP~~-----~~~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~-~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~ 293 (384)
T 2pgw_A 222 --EQPTV-----SWSIPAMAHVREKVGIPIVADQAAFTLYDVYEICRQ-RAADMICIGPREIGGIQPMMKAAAVAEAAGL 293 (384)
T ss_dssp --ECCSC-----TTCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHT-TCCSEEEECHHHHTSHHHHHHHHHHHHHTTC
T ss_pred --eCCCC-----hhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHc-CCCCEEEEcchhhCCHHHHHHHHHHHHHCCC
Confidence 44432 1235667777776556555443 4578999999886 357777776654311 123578999999999
Q ss_pred eEEeeccccc
Q 022088 163 KLITYGTVMG 172 (303)
Q Consensus 163 ~via~spl~~ 172 (303)
.++..+.+..
T Consensus 294 ~~~~~~~~es 303 (384)
T 2pgw_A 294 KICIHSSFTT 303 (384)
T ss_dssp CEEECCCSCC
T ss_pred eEeeccCcCC
Confidence 9988764433
No 47
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=70.51 E-value=20 Score=31.44 Aligned_cols=99 Identities=7% Similarity=0.034 Sum_probs=61.7
Q ss_pred HHHHHHHHHhhcCCCcccEEEE-ecCCCCCCcHHHHHHHHHHHHHcCCccEEEec-----CCCHHHHHHHHHcC--CCee
Q 022088 65 VRESIDVSRRRMDVPCLDMLQF-HWWDYSNPGYLDALNHLTDLKEEGKIKTVALT-----NFDTERLRIILENG--IPVV 136 (303)
Q Consensus 65 i~~sve~SL~~Lg~d~iDl~~l-H~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS-----~~~~~~l~~~~~~~--~~~~ 136 (303)
+.+..++..+..|.|.||+=.- -+|+......++..+.++.+++.-. --|-|- +++++.++++++.+ .++.
T Consensus 82 ~~~~A~~~v~~~GAdiIDIg~eStrP~~~~vs~ee~~~~V~~v~~~~~-vPlsIDg~~~~T~~~eV~eaAleagag~~~l 160 (323)
T 4djd_D 82 PGRWAQKCVAEYGADLIYLKLDGADPEGANHSVDQCVATVKEVLQAVG-VPLVVVGCGDVEKDHEVLEAVAEAAAGENLL 160 (323)
T ss_dssp HHHHHHHHHHTTCCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCC-SCEEEECCSCHHHHHHHHHHHHHHTTTSCCE
T ss_pred HHHHHHHHHHHcCCCEEEEcCccCCCCCCCCCHHHHHHHHHHHHhhCC-ceEEEECCCCCCCCHHHHHHHHHhcCCCCCe
Confidence 3333333336779999998533 3444333234566667777766522 235555 66789999999874 2344
Q ss_pred eecccccccccChhhhHHHHHHHhCCeEEeecc
Q 022088 137 SNQVQHSVVDMRPQQKMAELCQLTGVKLITYGT 169 (303)
Q Consensus 137 ~~q~~~n~l~~~~~~~~~~~~~~~gi~via~sp 169 (303)
++-+... . ..++++.++++|..++++.|
T Consensus 161 INsv~~~----~-~~~m~~laa~~g~~vVlmh~ 188 (323)
T 4djd_D 161 LGNAEQE----N-YKSLTAACMVHKHNIIARSP 188 (323)
T ss_dssp EEEEBTT----B-CHHHHHHHHHHTCEEEEECS
T ss_pred EEECCcc----c-HHHHHHHHHHhCCeEEEEcc
Confidence 4433321 1 24789999999999999876
No 48
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=70.22 E-value=36 Score=30.28 Aligned_cols=141 Identities=6% Similarity=-0.101 Sum_probs=83.3
Q ss_pred HHHHHHHHcCCceeehH----hHHHH---HHHhccCCCCccceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCcccEE
Q 022088 12 PLLTWLIYMGLLKISMA----SSSIE---FVERGHQSSWIRSEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDML 84 (303)
Q Consensus 12 ~lv~~Al~~Gi~~~DtA----~~y~~---~~~~~~~~~~r~~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iDl~ 84 (303)
+..+.+.+.|++.|..- ....- +..++..+. ++-|.-+.. ..++.+...+-++. |+.+| +
T Consensus 151 ~~a~~~~~~Gf~~iKik~g~~~~~~~e~v~avr~a~g~---d~~l~vDan---~~~~~~~a~~~~~~-l~~~~-----i- 217 (379)
T 2rdx_A 151 AELARHRAAGYRQFQIKVGADWQSDIDRIRACLPLLEP---GEKAMADAN---QGWRVDNAIRLARA-TRDLD-----Y- 217 (379)
T ss_dssp HHHHHHHHTTCCEEEEECCSCHHHHHHHHHHHGGGSCT---TCEEEEECT---TCSCHHHHHHHHHH-TTTSC-----C-
T ss_pred HHHHHHHHcCCCEEEEeccCCHHHHHHHHHHHHHhcCC---CCEEEEECC---CCCCHHHHHHHHHH-HHhCC-----e-
Confidence 34566778999888751 11111 122332221 455555542 25577665554433 55554 4
Q ss_pred EEecCCCCCCcHHHHHHHHHHHHHcCCccEEEe-cCCCHHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHHHHHhCC
Q 022088 85 QFHWWDYSNPGYLDALNHLTDLKEEGKIKTVAL-TNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGV 162 (303)
Q Consensus 85 ~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGv-S~~~~~~l~~~~~~~~~~~~~q~~~n~l~~-~~~~~~~~~~~~~gi 162 (303)
++..|-+ .++.+.++++.-.|-=++. +.++++.++++++. ...+++|+..+-.-- ....++...|+++|+
T Consensus 218 ~iE~P~~-------~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~-~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~ 289 (379)
T 2rdx_A 218 ILEQPCR-------SYEECQQVRRVADQPMKLDECVTGLHMAQRIVAD-RGAEICCLKISNLGGLSKARRTRDFLIDNRM 289 (379)
T ss_dssp EEECCSS-------SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHH-TCCSEEEEETTTTTSHHHHHHHHHHHHHTTC
T ss_pred EEeCCcC-------CHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHc-CCCCEEEEeccccCCHHHHHHHHHHHHHcCC
Confidence 4555432 4567778887655554443 34678999998887 357888887665411 123478899999999
Q ss_pred eEEeecccccc
Q 022088 163 KLITYGTVMGG 173 (303)
Q Consensus 163 ~via~spl~~G 173 (303)
.++..+-+..+
T Consensus 290 ~~~~~~~~es~ 300 (379)
T 2rdx_A 290 PVVAEDSWGGE 300 (379)
T ss_dssp CEEEECSBCSH
T ss_pred eEEEeeccCcH
Confidence 99988644443
No 49
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=67.77 E-value=68 Score=28.66 Aligned_cols=150 Identities=11% Similarity=0.096 Sum_probs=87.4
Q ss_pred HHHhhcCCCcccEEEEecC-------CCCCCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHcCCCeeeeccccc
Q 022088 71 VSRRRMDVPCLDMLQFHWW-------DYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQHS 143 (303)
Q Consensus 71 ~SL~~Lg~d~iDl~~lH~~-------~~~~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~~q~~~n 143 (303)
.+|+.||.+|=|+-.+|.. |.... .++ ...|-.. .--.+=.|+.+.+.+..+++.+..+.-+...+|
T Consensus 73 ~~l~~Lg~s~~dl~~~~~lGi~glRLD~Gf~-~~e----ia~ls~n-lkIeLNASti~~~~l~~l~~~~~n~~~l~a~HN 146 (372)
T 2p0o_A 73 EALKRAGFSFDELEPLIELGVTGLRMDYGIT-IEQ----MAHASHK-IDIGLNASTITLEEVAELKAHQADFSRLEAWHN 146 (372)
T ss_dssp HHHHTTTCBTTBCHHHHHHTCCEEEECSSCC-HHH----HHHHHTT-SEEEEETTTCCHHHHHHHHHTTCCGGGEEEECC
T ss_pred HHHHHcCCCHHHHHHHHHcCCCEEEEcCCCC-HHH----HHHHhcC-CEEEEECccCCHHHHHHHHHcCCChHHeEEeec
Confidence 3566777777666665543 33333 222 2233333 444566778889999999998666666666666
Q ss_pred ccccCh-------hhhHHHHHHHhCCeEEeeccccccccCCcccCCCCCCCCCCCCCCCchhHHHHhhhhccCCchhHHH
Q 022088 144 VVDMRP-------QQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNLSIPFAGPPLNTPSLQKYKRMVDAWGGWSQFQV 216 (303)
Q Consensus 144 ~l~~~~-------~~~~~~~~~~~gi~via~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (303)
.+-+.. -.+.=.+.++.|+.+.|+-|-..+ ..|....+ .| ....
T Consensus 147 FYPr~~TGLs~~~f~~~n~~~k~~Gi~t~AFI~g~~~-~rGPl~eG---LP---------TLE~---------------- 197 (372)
T 2p0o_A 147 YYPRPETGIGTTFFNEKNRWLKELGLQVFTFVPGDGQ-TRGPIFAG---LP---------TLEK---------------- 197 (372)
T ss_dssp CCCSTTCSBCHHHHHHHHHHHHHTTCEEEEEECCSSS-CCTTTCSC---CC---------SBGG----------------
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHCCCcEEEEecCCCc-cCCCccCC---CC---------chHH----------------
Confidence 553322 123445678889999999886442 22222111 11 1111
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHhhCCCCceeeeccCCCCHhHHHHhHh
Q 022088 217 LLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNA 266 (303)
Q Consensus 217 ~~~~l~~ia~~~g~s~~qlal~~~l~~~~v~~vi~G~~~~~~~~l~en~~ 266 (303)
..+.+| .++...+...+.|+-|++|=...+.+++++...
T Consensus 198 ----------HR~~~~-~~~a~~L~~~~~iD~V~IGd~~~S~~el~~l~~ 236 (372)
T 2p0o_A 198 ----------HRGQNP-FAAAVGLMADPYVDAVYIGDPTISERTMAQFGY 236 (372)
T ss_dssp ----------GTTSCH-HHHHHHHHHSTTCCEEEECSSCCCHHHHHHHHH
T ss_pred ----------hCCCCH-HHHHHHHHhcCCCCEEEECCCCCCHHHHHHHHH
Confidence 113344 456667788888999999877556666666555
No 50
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=64.68 E-value=18 Score=31.94 Aligned_cols=105 Identities=15% Similarity=0.180 Sum_probs=60.2
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEE-----EEecCCCCCCcHHHHHHHHHHHHHc-CCccEEEe---cCCCHHHHHHHH
Q 022088 59 KMTSSIVRESIDVSRRRMDVPCLDML-----QFHWWDYSNPGYLDALNHLTDLKEE-GKIKTVAL---TNFDTERLRIIL 129 (303)
Q Consensus 59 ~~~~~~i~~sve~SL~~Lg~d~iDl~-----~lH~~~~~~~~~~~~~~al~~l~~~-G~ir~iGv---S~~~~~~l~~~~ 129 (303)
.++.+.. ..+-+.|.++|+|+|.+= -.-.|+.. +.....++.++++++. ..++...+ .......++.+.
T Consensus 26 ~~~~e~k-~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g-~~~~~~~e~l~~i~~~~~~~~i~~l~~p~~~~~~~i~~a~ 103 (345)
T 1nvm_A 26 QYTLDDV-RAIARALDKAKVDSIEVAHGDGLQGSSFNYG-FGRHTDLEYIEAVAGEISHAQIATLLLPGIGSVHDLKNAY 103 (345)
T ss_dssp CCCHHHH-HHHHHHHHHHTCSEEECSCTTSTTCCBTTTB-CCSSCHHHHHHHHHTTCSSSEEEEEECBTTBCHHHHHHHH
T ss_pred CCCHHHH-HHHHHHHHHcCCCEEEEecCCCCCCCCCccc-CCCCCHHHHHHHHHhhCCCCEEEEEecCCcccHHHHHHHH
Confidence 4455544 445556788999988883 22222211 1123455666666654 24555555 222567788888
Q ss_pred HcCCCeeeecccccccccChhhhHHHHHHHhCCeEEee
Q 022088 130 ENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITY 167 (303)
Q Consensus 130 ~~~~~~~~~q~~~n~l~~~~~~~~~~~~~~~gi~via~ 167 (303)
+.|++...+-.+.|-. ..-.+.+++|+++|+.+..+
T Consensus 104 ~aGvd~v~I~~~~s~~--~~~~~~i~~ak~~G~~v~~~ 139 (345)
T 1nvm_A 104 QAGARVVRVATHCTEA--DVSKQHIEYARNLGMDTVGF 139 (345)
T ss_dssp HHTCCEEEEEEETTCG--GGGHHHHHHHHHHTCEEEEE
T ss_pred hCCcCEEEEEEeccHH--HHHHHHHHHHHHCCCEEEEE
Confidence 7765533332333322 23357899999999987765
No 51
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=64.15 E-value=68 Score=27.40 Aligned_cols=108 Identities=11% Similarity=0.068 Sum_probs=60.1
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHcCCCeeee
Q 022088 59 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSN 138 (303)
Q Consensus 59 ~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~~ 138 (303)
.++.+... .+-+.|.++|+++|.+-..-.|... +.+.+..+.+..+++...++..++. .+...++.+.+.+.+...+
T Consensus 23 ~~~~e~k~-~i~~~L~~~Gv~~IE~g~~~~~~~~-p~~~d~~~~~~~~~~~~~~~~~~l~-~~~~~i~~a~~ag~~~v~i 99 (298)
T 2cw6_A 23 IVSTPVKI-KLIDMLSEAGLSVIETTSFVSPKWV-PQMGDHTEVLKGIQKFPGINYPVLT-PNLKGFEAAVAAGAKEVVI 99 (298)
T ss_dssp CCCHHHHH-HHHHHHHHTTCSEECCEECCCTTTC-GGGTTHHHHHHHSCCCTTCBCCEEC-CSHHHHHHHHHTTCSEEEE
T ss_pred CCCHHHHH-HHHHHHHHcCcCEEEECCCcCcccc-cccCCHHHHHHHHhhCCCCEEEEEc-CCHHhHHHHHHCCCCEEEE
Confidence 34555544 6667889999999999875544211 1112222333333333234443443 5678888888876543332
Q ss_pred ccccccc------ccC------hhhhHHHHHHHhCCeEEeecc
Q 022088 139 QVQHSVV------DMR------PQQKMAELCQLTGVKLITYGT 169 (303)
Q Consensus 139 q~~~n~l------~~~------~~~~~~~~~~~~gi~via~sp 169 (303)
-..-|-. ++. .-.+.+++++++|+.+.++-.
T Consensus 100 ~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~ 142 (298)
T 2cw6_A 100 FGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVS 142 (298)
T ss_dssp EEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred EecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEE
Confidence 2222211 111 124578999999998876543
No 52
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=60.70 E-value=96 Score=27.92 Aligned_cols=106 Identities=14% Similarity=0.020 Sum_probs=68.3
Q ss_pred CCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHc------CCccEEEecCCCHHHHHHHHHcCC
Q 022088 60 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEE------GKIKTVALTNFDTERLRIILENGI 133 (303)
Q Consensus 60 ~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~------G~ir~iGvS~~~~~~l~~~~~~~~ 133 (303)
++++...+-+ +.|+.++.. +++ ++-.|-+... -.+-++.+.+|.++ +.--..|=+.++.+.++++++. .
T Consensus 249 ~~~~~A~~~~-~~L~~~~~~-~~l-~iEqP~~~~~-~~~d~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~-~ 323 (413)
T 1kko_A 249 MDPVRCAEYI-ASLEKEAQG-LPL-YIEGPVDAGN-KPDQIRMLTAITKELTRLGSGVKIVADEWCNTYQDIVDFTDA-G 323 (413)
T ss_dssp TCHHHHHHHH-HHTGGGGTT-SCE-EEECCCCCSS-HHHHHHHHHHHHHHHHHHTCCCEEEECTTCCSHHHHHHHHHT-T
T ss_pred CCHHHHHHHH-HHHHhccCC-cce-EEECCcCCCC-CcccHHHHHHHHHhcccCCCCCcEEcCCCCCCHHHHHHHHHh-C
Confidence 4555544333 335554442 665 7887744221 14567778787775 3334556667889999999886 3
Q ss_pred CeeeecccccccccC-hhhhHHHHHHHhCCeEEeeccc
Q 022088 134 PVVSNQVQHSVVDMR-PQQKMAELCQLTGVKLITYGTV 170 (303)
Q Consensus 134 ~~~~~q~~~n~l~~~-~~~~~~~~~~~~gi~via~spl 170 (303)
.++++|+..+-.--- ...++..+|+++|+.++..+..
T Consensus 324 a~d~i~ik~~~~GGitea~~i~~~A~~~gi~~~~~~~~ 361 (413)
T 1kko_A 324 SCHMVQIKTPDLGGIHNIVDAVLYCNKHGMEAYQGGTC 361 (413)
T ss_dssp CCSEEEECGGGGSSTHHHHHHHHHHHHHTCEEEECCCT
T ss_pred CCCEEEeCccccCCHHHHHHHHHHHHHcCCeEEecCCC
Confidence 478888876654211 2357999999999999987764
No 53
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=59.92 E-value=30 Score=28.44 Aligned_cols=93 Identities=9% Similarity=-0.056 Sum_probs=63.9
Q ss_pred HHHHHHHHcCCceeehHhHHHHHHHhccCCCCccceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEecCCC
Q 022088 12 PLLTWLIYMGLLKISMASSSIEFVERGHQSSWIRSEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDY 91 (303)
Q Consensus 12 ~lv~~Al~~Gi~~~DtA~~y~~~~~~~~~~~~r~~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~ 91 (303)
.+++.|.+.|+.-+-.-+.|+......... . ++-|+|-++.+.+..+.+.....+++.++ +|-|-||++.=-...
T Consensus 23 ~l~~~a~~~~~~aVcv~p~~v~~~~~~l~~-~--~v~v~~vigFP~G~~~~~~k~~e~~~Ai~-~GAdevd~vinig~~- 97 (220)
T 1ub3_A 23 KAAEEALEYGFYGLCIPPSYVAWVRARYPH-A--PFRLVTVVGFPLGYQEKEVKALEAALACA-RGADEVDMVLHLGRA- 97 (220)
T ss_dssp HHHHHHHHHTCSEEECCGGGHHHHHHHCTT-C--SSEEEEEESTTTCCSCHHHHHHHHHHHHH-TTCSEEEEECCHHHH-
T ss_pred HHHHHHHHhCCCEEEECHHHHHHHHHHhCC-C--CceEEEEecCCCCCCchHHHHHHHHHHHH-cCCCEEEecccchhh-
Confidence 578889999998888888887765433221 1 47788887776656677777788888877 799999998522211
Q ss_pred CCCcHHHHHHHHHHHHHc
Q 022088 92 SNPGYLDALNHLTDLKEE 109 (303)
Q Consensus 92 ~~~~~~~~~~al~~l~~~ 109 (303)
....++.+.+.+..+++.
T Consensus 98 ~~g~~~~v~~ei~~v~~a 115 (220)
T 1ub3_A 98 KAGDLDYLEAEVRAVREA 115 (220)
T ss_dssp HTTCHHHHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHH
Confidence 112256777777777765
No 54
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=56.74 E-value=51 Score=29.47 Aligned_cols=104 Identities=7% Similarity=-0.010 Sum_probs=68.3
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHcCCCeeee
Q 022088 59 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSN 138 (303)
Q Consensus 59 ~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~~ 138 (303)
.++++...+- -+.|+.+++ ++.++..|-+.. .++.+.++++.-.|.= |=|.++.+.++++++. ..++++
T Consensus 197 ~~~~~~A~~~-~~~l~~~~i---~~~~iEqP~~~~-----d~~~~~~l~~~~~iPI-dE~~~~~~~~~~~~~~-~~~d~v 265 (391)
T 3gd6_A 197 LLNWKDAHRA-IKRLTKYDL---GLEMIESPAPRN-----DFDGLYQLRLKTDYPI-SEHVWSFKQQQEMIKK-DAIDIF 265 (391)
T ss_dssp CSCHHHHHHH-HHHHTTCCS---SCCEEECCSCTT-----CHHHHHHHHHHCSSCE-EEECCCHHHHHHHHHH-TCCSEE
T ss_pred CcCHHHHHHH-HHHHHhcCC---CcceecCCCChh-----hHHHHHHHHHHcCCCc-CCCCCCHHHHHHHHHc-CCCCEE
Confidence 4566554432 235555553 336667664322 2567788887766665 8899999999999987 347777
Q ss_pred ccccccccc-ChhhhHHHHHHHhCCeEEeecccccc
Q 022088 139 QVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 173 (303)
Q Consensus 139 q~~~n~l~~-~~~~~~~~~~~~~gi~via~spl~~G 173 (303)
|+..+-.-- .....+...|+++|+.++..+.+.+|
T Consensus 266 ~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es~ 301 (391)
T 3gd6_A 266 NISPVFIGGLTSAKKAAYAAEVASKDVVLGTTQELS 301 (391)
T ss_dssp EECHHHHTSHHHHHHHHHHHHHTTCEEEECCCCCCH
T ss_pred EECchhcCCHHHHHHHHHHHHHcCCEEEecCCCccH
Confidence 877655411 12347899999999999987655443
No 55
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=54.41 E-value=59 Score=25.76 Aligned_cols=89 Identities=16% Similarity=0.244 Sum_probs=52.3
Q ss_pred CHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEEecC-CCHHHHHHHHHcCCCeeeec
Q 022088 61 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTN-FDTERLRIILENGIPVVSNQ 139 (303)
Q Consensus 61 ~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS~-~~~~~l~~~~~~~~~~~~~q 139 (303)
+.+...+-+ +.+..-|. |++-+|... +...+.++.+.+.. ++-..+|+++ .++++++++.+.|.++. +.
T Consensus 20 ~~~~~~~~~-~~~~~~G~---~~iev~~~~---~~~~~~i~~ir~~~--~~~~~ig~~~v~~~~~~~~a~~~Gad~i-v~ 89 (205)
T 1wa3_A 20 SVEEAKEKA-LAVFEGGV---HLIEITFTV---PDADTVIKELSFLK--EKGAIIGAGTVTSVEQCRKAVESGAEFI-VS 89 (205)
T ss_dssp SHHHHHHHH-HHHHHTTC---CEEEEETTS---TTHHHHHHHTHHHH--HTTCEEEEESCCSHHHHHHHHHHTCSEE-EC
T ss_pred CHHHHHHHH-HHHHHCCC---CEEEEeCCC---hhHHHHHHHHHHHC--CCCcEEEecccCCHHHHHHHHHcCCCEE-Ec
Confidence 455554444 34455565 555677542 22334444444333 3234688844 78888888888765544 22
Q ss_pred ccccccccChhhhHHHHHHHhCCeEEe
Q 022088 140 VQHSVVDMRPQQKMAELCQLTGVKLIT 166 (303)
Q Consensus 140 ~~~n~l~~~~~~~~~~~~~~~gi~via 166 (303)
..| ..++++.|++.|+.++.
T Consensus 90 ~~~-------~~~~~~~~~~~g~~vi~ 109 (205)
T 1wa3_A 90 PHL-------DEEISQFCKEKGVFYMP 109 (205)
T ss_dssp SSC-------CHHHHHHHHHHTCEEEC
T ss_pred CCC-------CHHHHHHHHHcCCcEEC
Confidence 111 24689999999999885
No 56
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=54.28 E-value=84 Score=25.31 Aligned_cols=77 Identities=19% Similarity=0.226 Sum_probs=49.3
Q ss_pred HHHHHH-HHHHHHHcCCccEEEecCCCHHHHHHHHHc--CCCeeeeccccccccc---ChhhhHHHHHHHhCCeEEeecc
Q 022088 96 YLDALN-HLTDLKEEGKIKTVALTNFDTERLRIILEN--GIPVVSNQVQHSVVDM---RPQQKMAELCQLTGVKLITYGT 169 (303)
Q Consensus 96 ~~~~~~-al~~l~~~G~ir~iGvS~~~~~~l~~~~~~--~~~~~~~q~~~n~l~~---~~~~~~~~~~~~~gi~via~sp 169 (303)
.+++++ +.+++++. -|++|=|.+.+.+....+.+. +.++.+|--.+..-.+ ...++..+..++.|+.++..+=
T Consensus 28 T~~tl~la~era~e~-~Ik~iVVAS~sG~TA~k~~e~~~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L~~~G~~V~t~tH 106 (201)
T 1vp8_A 28 TEETLRLAVERAKEL-GIKHLVVASSYGDTAMKALEMAEGLEVVVVTYHTGFVREGENTMPPEVEEELRKRGAKIVRQSH 106 (201)
T ss_dssp HHHHHHHHHHHHHHH-TCCEEEEECSSSHHHHHHHHHCTTCEEEEEECCTTSSSTTCCSSCHHHHHHHHHTTCEEEECCC
T ss_pred HHHHHHHHHHHHHHc-CCCEEEEEeCCChHHHHHHHHhcCCeEEEEeCcCCCCCCCCCcCCHHHHHHHHhCCCEEEEEec
Confidence 466766 44555555 499999998887776666664 3344444333332221 2256889999999999987665
Q ss_pred cccc
Q 022088 170 VMGG 173 (303)
Q Consensus 170 l~~G 173 (303)
+-.|
T Consensus 107 ~lsg 110 (201)
T 1vp8_A 107 ILSG 110 (201)
T ss_dssp TTTT
T ss_pred cccc
Confidence 5444
No 57
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=53.62 E-value=27 Score=31.23 Aligned_cols=142 Identities=12% Similarity=0.023 Sum_probs=83.9
Q ss_pred HHHHHHHcCCceeeh--Hh---HHHHH--HHhccCCCCccceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEE
Q 022088 13 LLTWLIYMGLLKISM--AS---SSIEF--VERGHQSSWIRSEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQ 85 (303)
Q Consensus 13 lv~~Al~~Gi~~~Dt--A~---~y~~~--~~~~~~~~~r~~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iDl~~ 85 (303)
..+.+.+.|++.|.. .. ..... ..++..+. ++-|.-+.. ..++.+...+-++. |+.+|+++|
T Consensus 171 ~a~~~~~~Gf~~vKik~g~~~~~~~e~v~avr~a~g~---d~~l~vDan---~~~~~~~a~~~~~~-l~~~~i~~i---- 239 (388)
T 2nql_A 171 LAKYWQDRGFNAFKFATPVADDGPAAEIANLRQVLGP---QAKIAADMH---WNQTPERALELIAE-MQPFDPWFA---- 239 (388)
T ss_dssp HHHHHHHTTCCEEEEEGGGCTTCHHHHHHHHHHHHCT---TSEEEEECC---SCSCHHHHHHHHHH-HGGGCCSCE----
T ss_pred HHHHHHHhCCCEEEEeCCCCChHHHHHHHHHHHHhCC---CCEEEEECC---CCCCHHHHHHHHHH-HhhcCCCEE----
Confidence 445667889888764 11 11111 11221111 344444542 25677777666654 888887765
Q ss_pred EecCCCCCCcHHHHHHHHHHHHHcCCccEEEec-CCCHHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHHHHHhCCe
Q 022088 86 FHWWDYSNPGYLDALNHLTDLKEEGKIKTVALT-NFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVK 163 (303)
Q Consensus 86 lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS-~~~~~~l~~~~~~~~~~~~~q~~~n~l~~-~~~~~~~~~~~~~gi~ 163 (303)
..|-+. +.++.+.++++.-.|-=++-- .++++.++++++. ...+++|+..+- -- ....++..+|+++|+.
T Consensus 240 -EqP~~~-----~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~-~~~d~v~ik~~~-GGit~~~~i~~~A~~~g~~ 311 (388)
T 2nql_A 240 -EAPVWT-----EDIAGLEKVSKNTDVPIAVGEEWRTHWDMRARIER-CRIAIVQPEMGH-KGITNFIRIGALAAEHGID 311 (388)
T ss_dssp -ECCSCT-----TCHHHHHHHHTSCCSCEEECTTCCSHHHHHHHHTT-SCCSEECCCHHH-HCHHHHHHHHHHHHHHTCE
T ss_pred -ECCCCh-----hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHc-CCCCEEEecCCC-CCHHHHHHHHHHHHHcCCe
Confidence 344221 335677888876556544443 4578899998876 347777776554 11 1234688999999999
Q ss_pred EEeecccccc
Q 022088 164 LITYGTVMGG 173 (303)
Q Consensus 164 via~spl~~G 173 (303)
++..+-+..+
T Consensus 312 ~~~h~~~es~ 321 (388)
T 2nql_A 312 VIPHATVGAG 321 (388)
T ss_dssp ECCCCCSSCS
T ss_pred EEeecCCCcH
Confidence 9887544443
No 58
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=53.10 E-value=1.1e+02 Score=27.13 Aligned_cols=140 Identities=9% Similarity=0.018 Sum_probs=82.8
Q ss_pred HHHHHHHcCCceeehH-----hHHHH--HHHhccCCCCccceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEE
Q 022088 13 LLTWLIYMGLLKISMA-----SSSIE--FVERGHQSSWIRSEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQ 85 (303)
Q Consensus 13 lv~~Al~~Gi~~~DtA-----~~y~~--~~~~~~~~~~r~~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iDl~~ 85 (303)
.++.+++.|++.|..= ..-+. +..++..+. ++-|.-+... .++.+...+-+ +.|+.+ ++ +
T Consensus 152 ~a~~~~~~G~~~iKiK~G~~~~~d~~~v~avR~a~g~---~~~l~vDan~---~~~~~~a~~~~-~~l~~~-----~i-~ 218 (378)
T 3eez_A 152 VIDRYRQRGYVAHSVKIGGDVERDIARIRDVEDIREP---GEIVLYDVNR---GWTRQQALRVM-RATEDL-----HV-M 218 (378)
T ss_dssp HHHHHHHTTCCEEEEECCSCHHHHHHHHHHHTTSCCT---TCEEEEECTT---CCCHHHHHHHH-HHTGGG-----TC-C
T ss_pred HHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHHcCC---CceEEEECCC---CCCHHHHHHHH-HHhccC-----Ce-E
Confidence 3456778999998751 11111 123333211 4555555432 45666543322 344554 44 5
Q ss_pred EecCCCCCCcHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHHHHHhCCe
Q 022088 86 FHWWDYSNPGYLDALNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVK 163 (303)
Q Consensus 86 lH~~~~~~~~~~~~~~al~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~~q~~~n~l~~-~~~~~~~~~~~~~gi~ 163 (303)
+..|-+ .++.+.++++.-.|. ..|=+.++.++++++++. ..++++|+..+-.-- ..-.++..+|+++|+.
T Consensus 219 iEqP~~-------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~-~~~d~v~ik~~~~GGit~~~~ia~~A~~~g~~ 290 (378)
T 3eez_A 219 FEQPGE-------TLDDIAAIRPLHSAPVSVDECLVTLQDAARVARD-GLAEVFGIKLNRVGGLTRAARMRDIALTHGID 290 (378)
T ss_dssp EECCSS-------SHHHHHHTGGGCCCCEEECTTCCSHHHHHHHHHT-TCCSEEEEEHHHHTSHHHHHHHHHHHHHTTCE
T ss_pred EecCCC-------CHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHc-CCCCEEEeCchhcCCHHHHHHHHHHHHHcCCE
Confidence 666533 245677777765554 344556789999999886 357888887655411 1235789999999999
Q ss_pred EEeecccccc
Q 022088 164 LITYGTVMGG 173 (303)
Q Consensus 164 via~spl~~G 173 (303)
++..+.+.++
T Consensus 291 ~~~~~~~es~ 300 (378)
T 3eez_A 291 MFVMATGGSV 300 (378)
T ss_dssp EEEECSSCSH
T ss_pred EEcCCCCCCH
Confidence 9977666544
No 59
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=50.02 E-value=58 Score=29.04 Aligned_cols=99 Identities=8% Similarity=-0.049 Sum_probs=65.4
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEE-ecCCCHHHHHHHHHcCCCeee
Q 022088 59 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVA-LTNFDTERLRIILENGIPVVS 137 (303)
Q Consensus 59 ~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iG-vS~~~~~~l~~~~~~~~~~~~ 137 (303)
.++.+...+-++. |+.+|+++ +..|-+. +.++.+.++++.-.|-=.+ =+.++++.++++++. ...++
T Consensus 204 ~~~~~~a~~~~~~-l~~~~i~~-----iEqP~~~-----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~-~~~d~ 271 (391)
T 2qgy_A 204 PEDLDQTKSFLKE-VSSFNPYW-----IEEPVDG-----ENISLLTEIKNTFNMKVVTGEKQSGLVHFRELISR-NAADI 271 (391)
T ss_dssp CSCHHHHHHHHHH-HGGGCCSE-----EECSSCT-----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHT-TCCSE
T ss_pred CCCHHHHHHHHHH-HHhcCCCe-----EeCCCCh-----hhHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHc-CCCCE
Confidence 5577776666555 78887765 4444321 2356677777765554444 344678999999886 35788
Q ss_pred eccccccccc-ChhhhHHHHHHHhCCeEEeecc
Q 022088 138 NQVQHSVVDM-RPQQKMAELCQLTGVKLITYGT 169 (303)
Q Consensus 138 ~q~~~n~l~~-~~~~~~~~~~~~~gi~via~sp 169 (303)
+|+..+-.-- ....++...|+++|+.++..+.
T Consensus 272 v~ik~~~~GGit~~~~i~~~A~~~gi~~~~~~~ 304 (391)
T 2qgy_A 272 FNPDISGMGGLIDIIEISNEASNNGIFISPHCW 304 (391)
T ss_dssp ECCBTTTSSCHHHHHHHHHHHHHTTCEECCBCC
T ss_pred EEECcchhCCHHHHHHHHHHHHHCCCEEeccCC
Confidence 8887655311 1134789999999999988765
No 60
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=49.41 E-value=33 Score=30.37 Aligned_cols=103 Identities=9% Similarity=-0.040 Sum_probs=66.4
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEE-EecCCCHHHHHHHHHcCCCeee
Q 022088 59 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTV-ALTNFDTERLRIILENGIPVVS 137 (303)
Q Consensus 59 ~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~i-GvS~~~~~~l~~~~~~~~~~~~ 137 (303)
.++.+...+-++ .|+.+|+++ +..|-+. +.++.+.++++.-.|-=. |=+.++.+.++++++. ...++
T Consensus 198 ~~~~~~a~~~~~-~l~~~~i~~-----iEqP~~~-----~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~-~~~d~ 265 (370)
T 1nu5_A 198 GWDEQTASIWIP-RLEEAGVEL-----VEQPVPR-----ANFGALRRLTEQNGVAILADESLSSLSSAFELARD-HAVDA 265 (370)
T ss_dssp CCCHHHHHHHHH-HHHHHTCCE-----EECCSCT-----TCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHT-TCCSE
T ss_pred CCCHHHHHHHHH-HHHhcCcce-----EeCCCCc-----ccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHh-CCCCE
Confidence 457776665544 678887664 4555322 235667777776555433 3345688999999886 34777
Q ss_pred eccccccccc-ChhhhHHHHHHHhCCeEEeecccccc
Q 022088 138 NQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 173 (303)
Q Consensus 138 ~q~~~n~l~~-~~~~~~~~~~~~~gi~via~spl~~G 173 (303)
+|+..+-.-- ....++...|+++|+.++..+.+..+
T Consensus 266 v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~ 302 (370)
T 1nu5_A 266 FSLKLCNMGGIANTLKVAAVAEAAGISSYGGTMLDST 302 (370)
T ss_dssp EEECHHHHTSHHHHHHHHHHHHHHTCEEEECCSSCCH
T ss_pred EEEchhhcCCHHHHHHHHHHHHHcCCcEEecCCcchH
Confidence 7876654311 12357889999999999988765444
No 61
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=48.83 E-value=1.1e+02 Score=26.31 Aligned_cols=105 Identities=11% Similarity=-0.007 Sum_probs=61.2
Q ss_pred CHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHc--CCc-cEEEecCCCHHHHHHHHHc--CCCe
Q 022088 61 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEE--GKI-KTVALTNFDTERLRIILEN--GIPV 135 (303)
Q Consensus 61 ~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~--G~i-r~iGvS~~~~~~l~~~~~~--~~~~ 135 (303)
+++.+.+..++.. .-|-|.||+=. . ..... .++.++.+..+.+. ... --|-|-++.++.++++++. |. .
T Consensus 35 ~~~~a~~~A~~~v-~~GAdiIDIg~--g-~~~v~-~~eem~rvv~~i~~~~~~~~vpisIDT~~~~V~eaaL~~~~Ga-~ 108 (300)
T 3k13_A 35 KYDEALSIARQQV-EDGALVIDVNM--D-DGLLD-ARTEMTTFLNLIMSEPEIARVPVMIDSSKWEVIEAGLKCLQGK-S 108 (300)
T ss_dssp CHHHHHHHHHHHH-HTTCSEEEEEC--C-CTTSC-HHHHHHHHHHHHHTCHHHHTSCEEEECSCHHHHHHHHHHCSSC-C
T ss_pred CHHHHHHHHHHHH-HCCCCEEEECC--C-CCCCC-HHHHHHHHHHHHHHhhhcCCCeEEEeCCCHHHHHHHHHhcCCC-C
Confidence 5566666655544 57999999976 1 11222 33444444444331 001 2477888999999999983 43 2
Q ss_pred eeecccccccccCh-hhhHHHHHHHhCCeEEeecccccc
Q 022088 136 VSNQVQHSVVDMRP-QQKMAELCQLTGVKLITYGTVMGG 173 (303)
Q Consensus 136 ~~~q~~~n~l~~~~-~~~~~~~~~~~gi~via~spl~~G 173 (303)
.+|-+ |...... -.++++.+++.|..++.+.--..|
T Consensus 109 iINdI--s~~~~d~~~~~~~~l~a~~ga~vV~mh~d~~G 145 (300)
T 3k13_A 109 IVNSI--SLKEGEEVFLEHARIIKQYGAATVVMAFDEKG 145 (300)
T ss_dssp EEEEE--CSTTCHHHHHHHHHHHHHHTCEEEEESEETTE
T ss_pred EEEeC--CcccCChhHHHHHHHHHHhCCeEEEEeeCCCC
Confidence 33332 2221111 127899999999999987543344
No 62
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=48.78 E-value=54 Score=28.77 Aligned_cols=138 Identities=7% Similarity=-0.065 Sum_probs=83.2
Q ss_pred HHHHHHHcCCceeehH-----hHHHHH---HHhccCCCCccceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCcccEE
Q 022088 13 LLTWLIYMGLLKISMA-----SSSIEF---VERGHQSSWIRSEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDML 84 (303)
Q Consensus 13 lv~~Al~~Gi~~~DtA-----~~y~~~---~~~~~~~~~r~~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iDl~ 84 (303)
..+.+.+.|++.|..- ....-+ ..++..+. ++-|.-+.. ..++.+...+-++. |+.+|+++|
T Consensus 151 ~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~g~---~~~l~vDan---~~~~~~~a~~~~~~-l~~~~i~~i--- 220 (359)
T 1mdl_A 151 RAVTAAELGFRAVKTRIGYPALDQDLAVVRSIRQAVGD---DFGIMVDYN---QSLDVPAAIKRSQA-LQQEGVTWI--- 220 (359)
T ss_dssp HHHHHHHTTCSEEEEECCCSSHHHHHHHHHHHHHHHCS---SSEEEEECT---TCSCHHHHHHHHHH-HHHHTCSCE---
T ss_pred HHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHHhCC---CCEEEEECC---CCCCHHHHHHHHHH-HHHhCCCeE---
Confidence 4556678898887641 111111 11221111 344444542 25577776665555 888888764
Q ss_pred EEecCCCCCCcHHHHHHHHHHHHHcCCccEEEec-CCCHHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHHHHHhCC
Q 022088 85 QFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALT-NFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGV 162 (303)
Q Consensus 85 ~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS-~~~~~~l~~~~~~~~~~~~~q~~~n~l~~-~~~~~~~~~~~~~gi 162 (303)
..|-+. +-++.+.++++.-.|-=++-- .++++.++++++. ...+++|+..+-.-- ....++..+|+++|+
T Consensus 221 --E~P~~~-----~~~~~~~~l~~~~~iPI~~de~~~~~~~~~~~i~~-~~~d~v~ik~~~~GGi~~~~~i~~~A~~~g~ 292 (359)
T 1mdl_A 221 --EEPTLQ-----HDYEGHQRIQSKLNVPVQMGENWLGPEEMFKALSI-GACRLAMPDAMKIGGVTGWIRASALAQQFGI 292 (359)
T ss_dssp --ECCSCT-----TCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHT-TCCSEECCBTTTTTHHHHHHHHHHHHHHTTC
T ss_pred --ECCCCh-----hhHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHc-CCCCEEeecchhhCCHHHHHHHHHHHHHcCC
Confidence 444221 335677888877666555443 4678999999886 357888887665411 123578899999999
Q ss_pred eEEeec
Q 022088 163 KLITYG 168 (303)
Q Consensus 163 ~via~s 168 (303)
.++..+
T Consensus 293 ~~~~~~ 298 (359)
T 1mdl_A 293 PMSSHL 298 (359)
T ss_dssp CBCCBS
T ss_pred eEeecc
Confidence 988775
No 63
>1uwk_A Urocanate hydratase; hydrolase, urocanase, imidazolonepropionate, histidine metabolism, lyase; HET: NAD URO; 1.19A {Pseudomonas putida} SCOP: e.51.1.1 PDB: 1w1u_A* 1uwl_A* 2v7g_A*
Probab=48.26 E-value=43 Score=31.12 Aligned_cols=118 Identities=20% Similarity=0.132 Sum_probs=78.6
Q ss_pred cHHHHHHHHHcCCceee--hHhHHH--H-------------HHHhcc-CCCCccceEEEccccCCC--------------
Q 022088 10 DLPLLTWLIYMGLLKIS--MASSSI--E-------------FVERGH-QSSWIRSEGDLTKWVPPP-------------- 57 (303)
Q Consensus 10 ~~~lv~~Al~~Gi~~~D--tA~~y~--~-------------~~~~~~-~~~~r~~~~I~tK~~~~~-------------- 57 (303)
+-+-.+..-+.|+..+- ||++|. | .+.+.. ...-+.++||++=++.-.
T Consensus 114 ~~e~f~~l~~~Gl~mYGQMTAGsw~YIG~QGIvqGTyeT~~~~~rk~~gg~L~G~~~lTaGLGGMgGAQplA~~mag~v~ 193 (557)
T 1uwk_A 114 NWEHFNELDAKGLAMYGQMTAGSWIYIGSQGIVQGTYETFVEAGRQHYGGSLKGKWVLTAGLGGMGGAQPLAATLAGACS 193 (557)
T ss_dssp SHHHHHHHHHTTCCCBCTTTTTTTCCCTTHHHHHHHHHHHHHHHHHHTSSCCTTCEEEEECCSTTTTHHHHHHHHTTCEE
T ss_pred CHHHHHHHHHcccccccCccccceeeecCcceeecHHHHHHHHHHHhcCCCCCceEEEEecCCccchhhHHHHHHcCceE
Confidence 44556677778877775 666652 1 111111 123345799999887421
Q ss_pred --CCCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHcCCCe
Q 022088 58 --VKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPV 135 (303)
Q Consensus 58 --~~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~ 135 (303)
.+.++..+. +|+.+-|+|.+ ..+++++++-.++.+++|+...||+-..-.+...++.+.++.|
T Consensus 194 i~~Evd~~ri~-------~R~~~gyld~~--------~~~ldeal~~~~~a~~~~~~~SIg~~GNaadv~~~l~~~~i~~ 258 (557)
T 1uwk_A 194 LNIESQQSRID-------FRLETRYVDEQ--------ATDLDDALVRIAKYTAEGKAISIALHGNAAEILPELVKRGVRP 258 (557)
T ss_dssp EEEESCHHHHH-------HHHHTTSCCEE--------CSSHHHHHHHHHHHHHTTCCCEEEEESCHHHHHHHHHHHTCCC
T ss_pred EEEEECHHHHH-------HHHhCCCceeE--------cCCHHHHHHHHHHHHHcCCceEEEEeccHHHHHHHHHHCCCCC
Confidence 123444443 56778898875 1237899999999999999999999988889899998876554
Q ss_pred e--eecccc
Q 022088 136 V--SNQVQH 142 (303)
Q Consensus 136 ~--~~q~~~ 142 (303)
+ .-|+..
T Consensus 259 DlvtDQTSa 267 (557)
T 1uwk_A 259 DMVTDQTSA 267 (557)
T ss_dssp SEECCCSCT
T ss_pred CCCCCCccc
Confidence 4 445543
No 64
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=47.45 E-value=48 Score=27.65 Aligned_cols=69 Identities=10% Similarity=0.000 Sum_probs=51.6
Q ss_pred HHHHHHHHcCCceeehHhHHHHHHHhccCCCCccceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCcccEE
Q 022088 12 PLLTWLIYMGLLKISMASSSIEFVERGHQSSWIRSEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDML 84 (303)
Q Consensus 12 ~lv~~Al~~Gi~~~DtA~~y~~~~~~~~~~~~r~~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iDl~ 84 (303)
++++.|.+.|+.-+-.-+.|+..+....... ++-|+|=++.+.+..+.+.-...+++.++. |-|-||++
T Consensus 47 ~lc~eA~~~~~~aVcV~p~~v~~a~~~L~~s---~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~-GAdEIDmV 115 (239)
T 3ngj_A 47 KLCSEAAEYKFASVCVNPTWVPLCAELLKGT---GVKVCTVIGFPLGATPSEVKAYETKVAVEQ-GAEEVDMV 115 (239)
T ss_dssp HHHHHHHHHTCSEEEECGGGHHHHHHHHTTS---SCEEEEEESTTTCCSCHHHHHHHHHHHHHT-TCSEEEEE
T ss_pred HHHHHHHhcCCcEEEECHHHHHHHHHHhCCC---CCeEEEEeccCCCCCchHHHHHHHHHHHHc-CCCEEEEE
Confidence 5788999999988888888877543332111 577777787776666777777788888886 99999987
No 65
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=47.08 E-value=58 Score=26.88 Aligned_cols=90 Identities=6% Similarity=-0.157 Sum_probs=63.1
Q ss_pred HHHHHHHHcCCceeehHhHHHHHHHhccCCCCccceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEecCCC
Q 022088 12 PLLTWLIYMGLLKISMASSSIEFVERGHQSSWIRSEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDY 91 (303)
Q Consensus 12 ~lv~~Al~~Gi~~~DtA~~y~~~~~~~~~~~~r~~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~ 91 (303)
.+++.|.+.|+.-+-.-+.|+..+..... .+-|+|-++.+.+..+.+.-...+++ -++|-|-||++.=-..-.
T Consensus 21 ~l~~~A~~~~~~aVcv~p~~v~~a~~~l~-----gv~v~tvigFP~G~~~~~~k~~E~~~--i~~GAdEID~Vinig~~~ 93 (226)
T 1vcv_A 21 AGARKAEELGVAAYCVNPIYAPVVRPLLR-----KVKLCVVADFPFGALPTASRIALVSR--LAEVADEIDVVAPIGLVK 93 (226)
T ss_dssp HHHHHHHHHTCSEEEECGGGHHHHGGGCS-----SSEEEEEESTTTCCSCHHHHHHHHHH--HTTTCSEEEEECCHHHHH
T ss_pred HHHHHHHHhCCCEEEECHHHHHHHHHHhC-----CCeEEEEeCCCCCCCchHHHHHHHHH--HHCCCCEEEEecchhhhc
Confidence 57889999999888888888887655442 16788888777666677777778887 558999999986322111
Q ss_pred CCCcHHHHHHHHHHHHHc
Q 022088 92 SNPGYLDALNHLTDLKEE 109 (303)
Q Consensus 92 ~~~~~~~~~~al~~l~~~ 109 (303)
...++.+.+.+..+++.
T Consensus 94 -~g~~~~v~~ei~~v~~a 110 (226)
T 1vcv_A 94 -SRRWAEVRRDLISVVGA 110 (226)
T ss_dssp -TTCHHHHHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHHHHH
Confidence 12256667777766664
No 66
>2xvc_A ESCRT-III, SSO0910; cell cycle, cell division, cytokinesis, winged-helix; 2.15A {Sulfolobus solfataricus}
Probab=46.87 E-value=13 Score=23.65 Aligned_cols=18 Identities=28% Similarity=0.387 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHHcCCcc
Q 022088 96 YLDALNHLTDLKEEGKIK 113 (303)
Q Consensus 96 ~~~~~~al~~l~~~G~ir 113 (303)
-+++++.|.+|.++|.|+
T Consensus 39 kdeV~~~LrrLe~KGLI~ 56 (59)
T 2xvc_A 39 KQEVVKLLEALKNKGLIA 56 (59)
T ss_dssp HHHHHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHHHHHCCCee
Confidence 479999999999999987
No 67
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=46.74 E-value=77 Score=26.61 Aligned_cols=82 Identities=13% Similarity=0.071 Sum_probs=50.2
Q ss_pred cEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEEecC------CCHHHHHHHHHcCCCeeeecccccccccC---hhhh
Q 022088 82 DMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTN------FDTERLRIILENGIPVVSNQVQHSVVDMR---PQQK 152 (303)
Q Consensus 82 Dl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS~------~~~~~l~~~~~~~~~~~~~q~~~n~l~~~---~~~~ 152 (303)
|.+++-.|....+ ....+.+..+.+.|.+--||=-. ..++.+.++.+.|. .+|+..+.+... ....
T Consensus 103 ~~vl~e~~~~~~~--~~~~~~l~~i~~~g~v~ILAHPeRy~~~~~~~~~l~~l~~~G~---~iEiN~~s~~g~~g~~~~~ 177 (262)
T 3qy7_A 103 KYILIEFPFDHVP--RYAEQLFYDLQLKGYIPVIAHPERNREIRENPSLLYHLVEKGA---ASQITSGSLAGIFGKQLKA 177 (262)
T ss_dssp SEEEEECCTTCCC--TTHHHHHHHHHHTTCEEEEECGGGCHHHHHCTHHHHHHHHTTC---EEEEEHHHHHTTTCHHHHH
T ss_pred eEEEEeCCCccCH--HHHHHHHHHHHHCCCcEEEECCCccccccccHHHHHHHHHCCC---EEEEECCccCcccchHHHH
Confidence 4566665543333 46677888999999988887543 13355667766653 355555554321 1234
Q ss_pred HHHHHHHhCCeEEeec
Q 022088 153 MAELCQLTGVKLITYG 168 (303)
Q Consensus 153 ~~~~~~~~gi~via~s 168 (303)
....+.+.|+.++.-|
T Consensus 178 ~~~~~~~~gl~~~igS 193 (262)
T 3qy7_A 178 FSLRLVEANLIHFVAS 193 (262)
T ss_dssp HHHHHHHTTCCCEEEC
T ss_pred HHHHHHhCCCeEEEEc
Confidence 6777788887766544
No 68
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=46.51 E-value=48 Score=29.62 Aligned_cols=100 Identities=8% Similarity=-0.064 Sum_probs=65.7
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEE-ecCCCHHHHHHHHHcCCCeee
Q 022088 59 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVA-LTNFDTERLRIILENGIPVVS 137 (303)
Q Consensus 59 ~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iG-vS~~~~~~l~~~~~~~~~~~~ 137 (303)
.++.+...+-++. |+.+|+++| ..|-+. +.++.+.++++.-.|-=.+ =+.++++.++++++. ...++
T Consensus 217 ~~~~~~a~~~~~~-l~~~~i~~i-----E~P~~~-----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~-~~~d~ 284 (393)
T 2og9_A 217 QWDRPTAQRMCRI-FEPFNLVWI-----EEPLDA-----YDHEGHAALALQFDTPIATGEMLTSAAEHGDLIRH-RAADY 284 (393)
T ss_dssp CCCHHHHHHHHHH-HGGGCCSCE-----ECCSCT-----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHT-TCCSE
T ss_pred CCCHHHHHHHHHH-HHhhCCCEE-----ECCCCc-----ccHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHC-CCCCE
Confidence 5677777766655 888887765 344221 2356677777765554443 345688999999886 35777
Q ss_pred eccccccccc-ChhhhHHHHHHHhCCeEEeeccc
Q 022088 138 NQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTV 170 (303)
Q Consensus 138 ~q~~~n~l~~-~~~~~~~~~~~~~gi~via~spl 170 (303)
+|+..+-.-- ....++...|+++|+.++..+..
T Consensus 285 v~ik~~~~GGit~~~~i~~~A~~~gi~~~~h~~~ 318 (393)
T 2og9_A 285 LMPDAPRVGGITPFLKIASLAEHAGLMLAPHFAM 318 (393)
T ss_dssp ECCCHHHHTSHHHHHHHHHHHHHTTCEECCCSCH
T ss_pred EeeCccccCCHHHHHHHHHHHHHcCCEEeccCcc
Confidence 7876554311 11357899999999999876543
No 69
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=46.37 E-value=64 Score=28.53 Aligned_cols=87 Identities=11% Similarity=0.042 Sum_probs=59.5
Q ss_pred cccEEEEecCCCCCCcHHHHHHHHHHHHHcCCc-cEEEecCCCHHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHHH
Q 022088 80 CLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELC 157 (303)
Q Consensus 80 ~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~~q~~~n~l~~-~~~~~~~~~~ 157 (303)
-.++.++..|-+.. .++.+.+++++-.| -+.|=|.++.+.+++++.. ..++++|+..+. -- ....++...|
T Consensus 214 ~~~i~~iEeP~~~~-----d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~-~a~d~v~ik~~~-GGit~~~~i~~~A 286 (365)
T 3ik4_A 214 SIPMVLFEQPLPRE-----DWAGMAQVTAQSGFAVAADESARSAHDVLRIARE-GTASVINIKLMK-AGVAEGLKMIAIA 286 (365)
T ss_dssp TCCEEEEECCSCTT-----CHHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHH-TCCSEEEECHHH-HCHHHHHHHHHHH
T ss_pred CCCceEEECCCCcc-----cHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHh-CCCCEEEEcCCc-cCHHHHHHHHHHH
Confidence 45788888774432 24566777765444 4566777889999998876 347777777654 11 1134689999
Q ss_pred HHhCCeEEeecccccc
Q 022088 158 QLTGVKLITYGTVMGG 173 (303)
Q Consensus 158 ~~~gi~via~spl~~G 173 (303)
+++|+.++..+.+.++
T Consensus 287 ~~~gi~~~~~~~~es~ 302 (365)
T 3ik4_A 287 QAAGLGLMIGGMVESI 302 (365)
T ss_dssp HHHTCEEEECCSSCCH
T ss_pred HHcCCeEEecCCcccH
Confidence 9999999988776554
No 70
>1x87_A Urocanase protein; structural genomics, protein STR initiative, MCSG, PSI, midwest center for structural genomi; HET: MSE NAD; 2.40A {Geobacillus stearothermophilus} SCOP: e.51.1.1
Probab=45.76 E-value=43 Score=31.06 Aligned_cols=85 Identities=20% Similarity=0.197 Sum_probs=62.1
Q ss_pred CccceEEEccccCCC----------------CCCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHH
Q 022088 43 WIRSEGDLTKWVPPP----------------VKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDL 106 (303)
Q Consensus 43 ~r~~~~I~tK~~~~~----------------~~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l 106 (303)
-+.++||++=++.-. .+.++..+. +|+.+-|+|.+. .+++++++-.++.
T Consensus 160 L~G~~~lTaGLGGMgGAQplA~~mag~v~i~~Evd~~ri~-------~R~~~gyld~~~--------~~ldeal~~~~~a 224 (551)
T 1x87_A 160 LAGTITLTAGLGGMGGAQPLAVTMNGGVCLAIEVDPARIQ-------RRIDTNYLDTMT--------DSLDAALEMAKQA 224 (551)
T ss_dssp CTTCEEEEECCSTTGGGHHHHHHHTTCEEEEEESCHHHHH-------HHHHTTSCSEEE--------SCHHHHHHHHHHH
T ss_pred CCceEEEEecCCccchhhHHHHHHcCceEEEEEECHHHHH-------HHHhCCCceeEc--------CCHHHHHHHHHHH
Confidence 345799999887421 133444443 567788999852 2378999999999
Q ss_pred HHcCCccEEEecCCCHHHHHHHHHcCCCee--eecccc
Q 022088 107 KEEGKIKTVALTNFDTERLRIILENGIPVV--SNQVQH 142 (303)
Q Consensus 107 ~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~--~~q~~~ 142 (303)
+++|+...||+-..-.+...++.+.++.|+ +-|+..
T Consensus 225 ~~~~~~~SIg~~GNaadv~~~l~~~~i~~DlvtDQTSa 262 (551)
T 1x87_A 225 KEEKKALSIGLVGNAAEVLPRLVETGFVPDVLTDQTSA 262 (551)
T ss_dssp HHTTCCEEEEEESCHHHHHHHHHHTTCCCSEECCCSCT
T ss_pred HHcCCceEEEEeccHHHHHHHHHHCCCCCCCCCCCccc
Confidence 999999999999888899999998865544 445544
No 71
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=45.74 E-value=44 Score=29.20 Aligned_cols=104 Identities=8% Similarity=-0.016 Sum_probs=65.6
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEE-EecCCCHHHHHHHHHcCCCeee
Q 022088 59 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTV-ALTNFDTERLRIILENGIPVVS 137 (303)
Q Consensus 59 ~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~i-GvS~~~~~~l~~~~~~~~~~~~ 137 (303)
.++.+...+-++. |+.++++ ..++..|-+. +-++.+.++++.-.|-=. |=+.++.+.++++++. ...++
T Consensus 192 ~~~~~~a~~~~~~-l~~~~i~---~~~iE~P~~~-----~~~~~~~~l~~~~~ipia~dE~~~~~~~~~~~i~~-~~~d~ 261 (345)
T 2zad_A 192 GYTQKEAVEFARA-VYQKGID---IAVYEQPVRR-----EDIEGLKFVRFHSPFPVAADESARTKFDVMRLVKE-EAVDY 261 (345)
T ss_dssp CSCHHHHHHHHHH-HHHTTCC---CSEEECCSCT-----TCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHH-TCCSE
T ss_pred CCCHHHHHHHHHH-HHhcCCC---eeeeeCCCCc-----ccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHh-CCCCE
Confidence 5577776665544 7887765 1145565332 235667777766555433 3345688999998876 34677
Q ss_pred eccccccccc-ChhhhHHHHHHHhCCeEEeecccccc
Q 022088 138 NQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 173 (303)
Q Consensus 138 ~q~~~n~l~~-~~~~~~~~~~~~~gi~via~spl~~G 173 (303)
+|+..+- -- .....+...|+++|+.++..+.+..+
T Consensus 262 v~ik~~~-GGit~~~~i~~~A~~~g~~~~~~~~~es~ 297 (345)
T 2zad_A 262 VNIKLMK-SGISDALAIVEIAESSGLKLMIGCMGESS 297 (345)
T ss_dssp EEECHHH-HHHHHHHHHHHHHHTTTCEEEECCSSCCH
T ss_pred EEEeccc-ccHHHHHHHHHHHHHcCCeEEEecCcccH
Confidence 7775432 10 11347889999999999988765443
No 72
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=45.70 E-value=70 Score=28.65 Aligned_cols=88 Identities=11% Similarity=0.007 Sum_probs=58.7
Q ss_pred CcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCc-cEEEecCCCHHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHH
Q 022088 79 PCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAEL 156 (303)
Q Consensus 79 d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~~q~~~n~l~~-~~~~~~~~~ 156 (303)
+-+++.++-.|-+... ++.+.+|.+.-.| -+.|=|.++.+.++.++.. ..++++|+..+. -- ....++...
T Consensus 243 ~~~~i~~iEeP~~~~d-----~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~-~a~d~i~~k~~~-GGit~~~~ia~~ 315 (393)
T 3u9i_A 243 HGIVPALFEQPVAKDD-----EEGLRRLTATRRVPVAADESVASATDAARLARN-AAVDVLNIKLMK-CGIVEALDIAAI 315 (393)
T ss_dssp TTCCCSEEECCSCTTC-----TTHHHHHHHTCSSCEEESTTCCSHHHHHHHHHT-TCCSEEEECHHH-HCHHHHHHHHHH
T ss_pred CCCCeEEEECCCCCCc-----HHHHHHHHhhCCCcEEeCCcCCCHHHHHHHHHc-CCCCEEEecccc-cCHHHHHHHHHH
Confidence 3456667776643222 3456667665443 4667778899999998886 347777877654 11 113468899
Q ss_pred HHHhCCeEEeecccccc
Q 022088 157 CQLTGVKLITYGTVMGG 173 (303)
Q Consensus 157 ~~~~gi~via~spl~~G 173 (303)
|+++|+.++..+.+.++
T Consensus 316 A~~~gi~~~~~~~~es~ 332 (393)
T 3u9i_A 316 ARTAGLHLMIGGMVESL 332 (393)
T ss_dssp HHHHTCEEEECCSSCCH
T ss_pred HHHcCCeEEecCCcccH
Confidence 99999999988776554
No 73
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=45.62 E-value=62 Score=28.94 Aligned_cols=88 Identities=8% Similarity=0.037 Sum_probs=59.7
Q ss_pred CcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCc-cEEEecCCCHHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHH
Q 022088 79 PCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAEL 156 (303)
Q Consensus 79 d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~~q~~~n~l~~-~~~~~~~~~ 156 (303)
+-+++.++-.|-+... ++.+.+|.+.-.| -+.|=|.++...+++++.. ..++++|+..+. -- .....+...
T Consensus 214 ~~~~i~~iEeP~~~~d-----~~~~~~l~~~~~iPIa~dEs~~~~~~~~~~i~~-~a~d~v~~k~~~-GGit~~~~i~~~ 286 (389)
T 3s5s_A 214 LGADVALLEQPVPRDD-----WDGMKEVTRRAGVDVAADESAASAEDVLRVAAE-RAATVVNIKLMK-GGIAEALDIAAV 286 (389)
T ss_dssp TTCEEEEEECCSCTTC-----HHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHT-TCCSEEEECHHH-HHHHHHHHHHHH
T ss_pred CCCCeEEEECCCCccc-----HHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHc-CCCCEEEecCCC-CCHHHHHHHHHH
Confidence 3457888887754322 3556666665333 4667778899999998886 347777777654 11 113468899
Q ss_pred HHHhCCeEEeecccccc
Q 022088 157 CQLTGVKLITYGTVMGG 173 (303)
Q Consensus 157 ~~~~gi~via~spl~~G 173 (303)
|+++|+.++..+.+.++
T Consensus 287 A~~~gi~~~~~~~~es~ 303 (389)
T 3s5s_A 287 ARAAGLGLMIGGMVESV 303 (389)
T ss_dssp HHHTTCEEEECCSSCCH
T ss_pred HHHcCCeEEecCCcccH
Confidence 99999999988776554
No 74
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=44.30 E-value=42 Score=30.01 Aligned_cols=103 Identities=13% Similarity=0.043 Sum_probs=66.4
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEE-ecCCCHHHHHHHHHcCCCeee
Q 022088 59 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVA-LTNFDTERLRIILENGIPVVS 137 (303)
Q Consensus 59 ~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iG-vS~~~~~~l~~~~~~~~~~~~ 137 (303)
.++.+...+-++ .|+.+|+++| ..|-+. +.++.+.++++.-.|-=.+ =+.++.+.++++++. ...++
T Consensus 199 ~~~~~~a~~~~~-~l~~~~i~~i-----EqP~~~-----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~-~~~d~ 266 (397)
T 2qde_A 199 AWTYDQALTTIR-ALEKYNLSKI-----EQPLPA-----WDLDGMARLRGKVATPIYADESAQELHDLLAIINK-GAADG 266 (397)
T ss_dssp CCCHHHHHHHHH-HHGGGCCSCE-----ECCSCT-----TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHH-TCCSE
T ss_pred CCCHHHHHHHHH-HHHhCCCCEE-----ECCCCh-----hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHc-CCCCE
Confidence 557777666554 6788877654 454321 2356677777765554333 344678899998876 34777
Q ss_pred eccccccccc-ChhhhHHHHHHHhCCeEEeecccccc
Q 022088 138 NQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 173 (303)
Q Consensus 138 ~q~~~n~l~~-~~~~~~~~~~~~~gi~via~spl~~G 173 (303)
+|+..+-.-- ....++...|+++|+.++..+-+.+|
T Consensus 267 v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~ 303 (397)
T 2qde_A 267 LMIKTQKAGGLLKAQRWLTLARLANLPVICGCMVGSG 303 (397)
T ss_dssp EEECHHHHTSHHHHHHHHHHHHHHTCCEEECCCSCCH
T ss_pred EEEeccccCCHHHHHHHHHHHHHcCCeEEEecCcccH
Confidence 7776654311 11346899999999999988655444
No 75
>2fkn_A Urocanate hydratase; rossman fold, lyase; HET: NAD; 2.20A {Bacillus subtilis}
Probab=43.79 E-value=43 Score=31.07 Aligned_cols=118 Identities=20% Similarity=0.169 Sum_probs=78.8
Q ss_pred cHHHHHHHHHcCCceee--hHhHHH--H-------------HHHhcc-CCCCccceEEEccccCCC--------------
Q 022088 10 DLPLLTWLIYMGLLKIS--MASSSI--E-------------FVERGH-QSSWIRSEGDLTKWVPPP-------------- 57 (303)
Q Consensus 10 ~~~lv~~Al~~Gi~~~D--tA~~y~--~-------------~~~~~~-~~~~r~~~~I~tK~~~~~-------------- 57 (303)
+-+-.+..-+.|+..+- ||++|. | .+.+.. ...-+.++||++=++.-.
T Consensus 110 ~~e~f~~l~~~Gl~mYGQMTAGsw~YIG~QGIvqGTyeT~~~~~rk~~gg~L~G~~~lTaGLGGMgGAQplA~~mag~v~ 189 (552)
T 2fkn_A 110 DWEHFHELEKKGLMMYGQMTAGSWIYIGSQGILQGTYETFAELARQHFGGSLKGTLTLTAGLGGMGGAQPLSVTMNEGVV 189 (552)
T ss_dssp SHHHHHHHHHTTCCCBCTTTTTTTCCCTTHHHHHHHHHHHHHHHHHHSSSCCTTCEEEEECCSTTTTHHHHHHHHTTCEE
T ss_pred CHHHHHHHHHcccccccCccccceeeecCcceeecHHHHHHHHHHHhcCCCCCceEEEEecCCccchhhHHHHHHcCceE
Confidence 44556677778877775 666652 1 111111 123345799999887421
Q ss_pred --CCCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHcCCCe
Q 022088 58 --VKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPV 135 (303)
Q Consensus 58 --~~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~ 135 (303)
.+.++..+. +|+.+-|+|.+. .+++++++-.++.+++|+...||+-..-.+...++.+.++.|
T Consensus 190 i~~Evd~~ri~-------~R~~~gyld~~~--------~~ldeal~~~~~a~~~~~~~SIg~~GNaadv~~~l~~~~i~~ 254 (552)
T 2fkn_A 190 IAVEVDEKRID-------KRIETKYCDRKT--------ASIEEALAWAEEAKLAGKPLSIALLGNAAEVHHTLLNRGVKI 254 (552)
T ss_dssp EEEESCHHHHH-------HHHHTTSCSEEE--------SCHHHHHHHHHHHHHTTCCEEEEEESCHHHHHHHHHTTTCCC
T ss_pred EEEEECHHHHH-------HHHhCCcceeEc--------CCHHHHHHHHHHHHHcCCceEEEEeccHHHHHHHHHHCCCCC
Confidence 123444443 567788999852 237899999999999999999999988889999998876554
Q ss_pred e--eecccc
Q 022088 136 V--SNQVQH 142 (303)
Q Consensus 136 ~--~~q~~~ 142 (303)
+ +-|+..
T Consensus 255 DlvtDQTSa 263 (552)
T 2fkn_A 255 DIVTDQTSA 263 (552)
T ss_dssp SEECCCSCT
T ss_pred CCCCCCccc
Confidence 4 445544
No 76
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=43.38 E-value=35 Score=30.14 Aligned_cols=142 Identities=11% Similarity=0.084 Sum_probs=80.2
Q ss_pred HHHHHHHHcCCceeehH----hH----HHHHHHhccCCCCccceEEEccccCCCCCCCHHHHH-HHHHHHHhhcCCCccc
Q 022088 12 PLLTWLIYMGLLKISMA----SS----SIEFVERGHQSSWIRSEGDLTKWVPPPVKMTSSIVR-ESIDVSRRRMDVPCLD 82 (303)
Q Consensus 12 ~lv~~Al~~Gi~~~DtA----~~----y~~~~~~~~~~~~r~~~~I~tK~~~~~~~~~~~~i~-~sve~SL~~Lg~d~iD 82 (303)
+..+.+.+.|++.|..- .. .+.. .++..+. ++-|.-+.. . .++.+... +-++ .|+.+|+++
T Consensus 147 ~~a~~~~~~Gf~~iKik~g~~~~~~~e~v~a-vr~a~g~---~~~l~vDan-~--~~~~~~a~~~~~~-~l~~~~i~~-- 216 (369)
T 2p8b_A 147 EEAASMIQKGYQSFKMKVGTNVKEDVKRIEA-VRERVGN---DIAIRVDVN-Q--GWKNSANTLTALR-SLGHLNIDW-- 216 (369)
T ss_dssp HHHHHHHHTTCCEEEEECCSCHHHHHHHHHH-HHHHHCT---TSEEEEECT-T--TTBSHHHHHHHHH-TSTTSCCSC--
T ss_pred HHHHHHHHcCcCEEEEEeCCCHHHHHHHHHH-HHHHhCC---CCeEEEECC-C--CCCHHHHHHHHHH-HHHhCCCcE--
Confidence 34556678898888641 11 1211 1221111 333443432 2 44556555 4443 366666654
Q ss_pred EEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEE-ecCCCHHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHHHHHh
Q 022088 83 MLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVA-LTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLT 160 (303)
Q Consensus 83 l~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iG-vS~~~~~~l~~~~~~~~~~~~~q~~~n~l~~-~~~~~~~~~~~~~ 160 (303)
+..|-+. +-++.+.++++.-.|-=.+ =+.++++.++++++. ...+++|+..+-.-- ....++...|+++
T Consensus 217 ---iEqP~~~-----~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~-~~~d~v~ik~~~~GGit~~~~i~~~A~~~ 287 (369)
T 2p8b_A 217 ---IEQPVIA-----DDIDAMAHIRSKTDLPLMIDEGLKSSREMRQIIKL-EAADKVNIKLMKCGGIYPAVKLAHQAEMA 287 (369)
T ss_dssp ---EECCBCT-----TCHHHHHHHHHTCCSCEEESTTCCSHHHHHHHHHH-TCCSEEEECHHHHTSHHHHHHHHHHHHHT
T ss_pred ---EECCCCc-----ccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHh-CCCCEEEeecchhCCHHHHHHHHHHHHHc
Confidence 4454321 2356777888775554443 344688999998886 347777776554311 1134788999999
Q ss_pred CCeEEeeccccc
Q 022088 161 GVKLITYGTVMG 172 (303)
Q Consensus 161 gi~via~spl~~ 172 (303)
|+.++..+.+..
T Consensus 288 g~~~~~~~~~es 299 (369)
T 2p8b_A 288 GIECQVGSMVES 299 (369)
T ss_dssp TCEEEECCSSCC
T ss_pred CCcEEecCCCcc
Confidence 999987765543
No 77
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=42.53 E-value=41 Score=29.82 Aligned_cols=103 Identities=7% Similarity=-0.044 Sum_probs=64.5
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHHcCCCeee
Q 022088 59 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVS 137 (303)
Q Consensus 59 ~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~ 137 (303)
.++.+...+ +-+.|+.+++++| ..|-+ .+-++.+.+++++-.|. ..|=+.++.++++++++. ..+++
T Consensus 194 ~~~~~~A~~-~~~~l~~~~i~~i-----EqP~~-----~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~-~~~d~ 261 (368)
T 3q45_A 194 GWSVETAIE-TLTLLEPYNIQHC-----EEPVS-----RNLYTALPKIRQACRIPIMADESCCNSFDAERLIQI-QACDS 261 (368)
T ss_dssp CBCHHHHHH-HHHHHGGGCCSCE-----ECCBC-----GGGGGGHHHHHHTCSSCEEESTTCCSHHHHHHHHHT-TCCSE
T ss_pred CCChHHHHH-HHHHHhhcCCCEE-----ECCCC-----hhHHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHc-CCCCe
Confidence 445555443 3345566665554 34422 12345677777765443 444566889999999886 35788
Q ss_pred eccccccccc-ChhhhHHHHHHHhCCeEEeecccccc
Q 022088 138 NQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 173 (303)
Q Consensus 138 ~q~~~n~l~~-~~~~~~~~~~~~~gi~via~spl~~G 173 (303)
+|+..+..-- ....++...|+++|+.++..+.+.++
T Consensus 262 v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~es~ 298 (368)
T 3q45_A 262 FNLKLSKSAGITNALNIIRLAEQAHMPVQVGGFLESR 298 (368)
T ss_dssp EEECTTTTTSHHHHHHHHHHHHHTTCCEEECCSSCCH
T ss_pred EEechhhcCCHHHHHHHHHHHHHcCCcEEecCccccH
Confidence 8887665411 11357899999999999987666444
No 78
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=42.52 E-value=35 Score=30.14 Aligned_cols=104 Identities=10% Similarity=0.032 Sum_probs=64.9
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCccE-EEecCCCHHHHHHHHHcCCCeee
Q 022088 59 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKT-VALTNFDTERLRIILENGIPVVS 137 (303)
Q Consensus 59 ~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~-iGvS~~~~~~l~~~~~~~~~~~~ 137 (303)
.++.+...+-++. |+..+ .++.++..|-+. +.++.+.++++.-.|-= .|=+.++.+.++++++. ...++
T Consensus 195 ~~~~~~a~~~~~~-l~~~~---~~i~~iEqP~~~-----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~-~~~d~ 264 (366)
T 1tkk_A 195 GWRPKEAVTAIRK-MEDAG---LGIELVEQPVHK-----DDLAGLKKVTDATDTPIMADESVFTPRQAFEVLQT-RSADL 264 (366)
T ss_dssp CSCHHHHHHHHHH-HHHTT---CCEEEEECCSCT-----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHH-TCCSE
T ss_pred CCCHHHHHHHHHH-HhhcC---CCceEEECCCCc-----ccHHHHHHHHhhCCCCEEEcCCCCCHHHHHHHHHh-CCCCE
Confidence 4577766655554 66611 245566666322 23566777776644443 34455788999998876 34777
Q ss_pred eccccccccc-ChhhhHHHHHHHhCCeEEeeccccc
Q 022088 138 NQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMG 172 (303)
Q Consensus 138 ~q~~~n~l~~-~~~~~~~~~~~~~gi~via~spl~~ 172 (303)
+|+..+-.-- .....+...|+++|+.++..+.+..
T Consensus 265 v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es 300 (366)
T 1tkk_A 265 INIKLMKAGGISGAEKINAMAEACGVECMVGSMIET 300 (366)
T ss_dssp EEECHHHHTSHHHHHHHHHHHHHHTCCEEECCSSCC
T ss_pred EEeehhhhcCHHHHHHHHHHHHHcCCcEEecCcccc
Confidence 7776654311 1135789999999999988776544
No 79
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=42.29 E-value=1.4e+02 Score=25.72 Aligned_cols=105 Identities=13% Similarity=0.184 Sum_probs=58.1
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEec-CCCCC-CcHHHHHHHHHHHHHcCCccEEEecCCC--------H-HHH--
Q 022088 59 KMTSSIVRESIDVSRRRMDVPCLDMLQFHW-WDYSN-PGYLDALNHLTDLKEEGKIKTVALTNFD--------T-ERL-- 125 (303)
Q Consensus 59 ~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~-~~~~~-~~~~~~~~al~~l~~~G~ir~iGvS~~~--------~-~~l-- 125 (303)
+.++..+...+... +.+|++. ++.|-. |.... ..+....+-++.+++.+. -.||++.+. . .++
T Consensus 93 ~~~~~~l~~~L~~~-~~~GI~n--ILaLrGDpp~~~~~~~~~A~dLv~~ir~~~~-f~IgvA~yPE~Hp~a~~~~~d~~~ 168 (304)
T 3fst_A 93 DATPDELRTIARDY-WNNGIRH--IVALRGDLPPGSGKPEMYASDLVTLLKEVAD-FDISVAAYPEVHPEAKSAQADLLN 168 (304)
T ss_dssp TSCHHHHHHHHHHH-HHTTCCE--EEEECCCCC------CCCHHHHHHHHHHHCC-CEEEEEECTTCCTTCSCHHHHHHH
T ss_pred CCCHHHHHHHHHHH-HHCCCCE--EEEecCCCCCCCCCCCCCHHHHHHHHHHcCC-CeEEEEeCCCcCCCCCCHHHHHHH
Confidence 45667776666654 5777654 344422 11100 011223344444444444 478888642 1 233
Q ss_pred -HHHHHcCCCeeeecccccccccChhhhHHHHHHHhCCeEEeeccccccc
Q 022088 126 -RIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGL 174 (303)
Q Consensus 126 -~~~~~~~~~~~~~q~~~n~l~~~~~~~~~~~~~~~gi~via~spl~~G~ 174 (303)
++-++.|..+.+-|.-|+. ..-..+++.|++.|+.+ |+-.|+
T Consensus 169 Lk~KvdAGAdf~iTQ~ffD~---~~~~~f~~~~r~~Gi~v----PIi~GI 211 (304)
T 3fst_A 169 LKRKVDAGANRAITQFFFDV---ESYLRFRDRCVSAGIDV----EIIPGI 211 (304)
T ss_dssp HHHHHHHTCCEEEECCCSCH---HHHHHHHHHHHHTTCCS----CEECEE
T ss_pred HHHHHHcCCCEEEeCccCCH---HHHHHHHHHHHhcCCCC----cEEEEe
Confidence 3333448889999999876 33346889999998752 555555
No 80
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=42.15 E-value=1.5e+02 Score=24.79 Aligned_cols=100 Identities=16% Similarity=0.108 Sum_probs=59.3
Q ss_pred CHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHc--CCCeeee
Q 022088 61 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN--GIPVVSN 138 (303)
Q Consensus 61 ~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~--~~~~~~~ 138 (303)
+.+.+.+..++.. .-|-|.||+-. .+ .... .++-++.+....++-.=--+.|-++.++.++++++. |.. -+|
T Consensus 23 ~~~~a~~~a~~~v-~~GAdiIDIg~--g~-~~v~-~~ee~~rvv~~i~~~~~~pisIDT~~~~v~~aAl~a~~Ga~-iIN 96 (262)
T 1f6y_A 23 DPAPVQEWARRQE-EGGARALDLNV--GP-AVQD-KVSAMEWLVEVTQEVSNLTLCLDSTNIKAIEAGLKKCKNRA-MIN 96 (262)
T ss_dssp CHHHHHHHHHHHH-HHTCSEEEEBC--C-----C-HHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHCSSCE-EEE
T ss_pred CHHHHHHHHHHHH-HCCCcEEEECC--CC-CCCC-hHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHhhCCCCC-EEE
Confidence 4566666555544 57999999875 11 1122 344444444444442112577889999999999987 532 221
Q ss_pred cccccccccChhhhHHHHHHHhCCeEEeecc
Q 022088 139 QVQHSVVDMRPQQKMAELCQLTGVKLITYGT 169 (303)
Q Consensus 139 q~~~n~l~~~~~~~~~~~~~~~gi~via~sp 169 (303)
..|.. ...-+++++.+++.|++++.+..
T Consensus 97 --dvs~~-~d~~~~~~~~~a~~~~~vvlmh~ 124 (262)
T 1f6y_A 97 --STNAE-REKVEKLFPLAVEHGAALIGLTM 124 (262)
T ss_dssp --EECSC-HHHHHHHHHHHHHTTCEEEEESC
T ss_pred --ECCCC-cccHHHHHHHHHHhCCcEEEEcC
Confidence 12222 11112789999999999998764
No 81
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=41.70 E-value=1.6e+02 Score=24.97 Aligned_cols=102 Identities=14% Similarity=0.045 Sum_probs=65.1
Q ss_pred CCHHHHHHHHHHHHhhcCCCcccEEEEe-cCCC----CCCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHcCCC
Q 022088 60 MTSSIVRESIDVSRRRMDVPCLDMLQFH-WWDY----SNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIP 134 (303)
Q Consensus 60 ~~~~~i~~sve~SL~~Lg~d~iDl~~lH-~~~~----~~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~ 134 (303)
.+.+.+.+..+ .+-.-|-|.||+=--- +|.. ....+..+...++.+++++. -|.|-++.++.++++++.|.+
T Consensus 26 ~~~~~a~~~a~-~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~~~--piSIDT~~~~va~aAl~aGa~ 102 (280)
T 1eye_A 26 LDLDDAVKHGL-AMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQGI--TVSIDTMRADVARAALQNGAQ 102 (280)
T ss_dssp CSHHHHHHHHH-HHHHTTCSEEEEECC--------------HHHHHHHHHHHHHTTC--CEEEECSCHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHH-HHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcCCC--EEEEeCCCHHHHHHHHHcCCC
Confidence 36676666653 4455689999998422 2221 11225567778888887643 478889999999999998643
Q ss_pred eeeecccccccccChhhhHHHHHHHhCCeEEeecc
Q 022088 135 VVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGT 169 (303)
Q Consensus 135 ~~~~q~~~n~l~~~~~~~~~~~~~~~gi~via~sp 169 (303)
+ +| ..|-.. ..+++++.+++.|+.++.+.-
T Consensus 103 i-IN--dvsg~~--~d~~m~~~~a~~~~~vVlmh~ 132 (280)
T 1eye_A 103 M-VN--DVSGGR--ADPAMGPLLAEADVPWVLMHW 132 (280)
T ss_dssp E-EE--ETTTTS--SCTTHHHHHHHHTCCEEEECC
T ss_pred E-EE--ECCCCC--CCHHHHHHHHHhCCeEEEEcC
Confidence 2 22 222221 134789999999999998753
No 82
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=41.46 E-value=8.7 Score=35.72 Aligned_cols=20 Identities=30% Similarity=0.247 Sum_probs=18.8
Q ss_pred hcHHHHHHHHHcCCceeehH
Q 022088 9 LDLPLLTWLIYMGLLKISMA 28 (303)
Q Consensus 9 ~~~~lv~~Al~~Gi~~~DtA 28 (303)
.++.++++|+++|++++|||
T Consensus 95 ~~l~Im~acleaGv~YlDTa 114 (480)
T 2ph5_A 95 SSLALIILCNQKGALYINAA 114 (480)
T ss_dssp CHHHHHHHHHHHTCEEEESS
T ss_pred cCHHHHHHHHHcCCCEEECC
Confidence 57899999999999999998
No 83
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=41.11 E-value=64 Score=28.88 Aligned_cols=99 Identities=9% Similarity=-0.093 Sum_probs=64.7
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEE-ecCCCHHHHHHHHHcCCCeee
Q 022088 59 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVA-LTNFDTERLRIILENGIPVVS 137 (303)
Q Consensus 59 ~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iG-vS~~~~~~l~~~~~~~~~~~~ 137 (303)
.++.+...+-++. |+.+++++ +..|-+. +.++.+.++++.-.|-=.+ =+.++++.++++++. ...++
T Consensus 230 ~~~~~~ai~~~~~-l~~~~i~~-----iEqP~~~-----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~-~~~d~ 297 (398)
T 2pp0_A 230 QWDRETAIRMGRK-MEQFNLIW-----IEEPLDA-----YDIEGHAQLAAALDTPIATGEMLTSFREHEQLILG-NASDF 297 (398)
T ss_dssp CSCHHHHHHHHHH-HGGGTCSC-----EECCSCT-----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHT-TCCSE
T ss_pred CCCHHHHHHHHHH-HHHcCCce-----eeCCCCh-----hhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHc-CCCCE
Confidence 5577777666665 88887765 4454322 2356677777765554443 345688999999886 34777
Q ss_pred eccccccccc-ChhhhHHHHHHHhCCeEEeecc
Q 022088 138 NQVQHSVVDM-RPQQKMAELCQLTGVKLITYGT 169 (303)
Q Consensus 138 ~q~~~n~l~~-~~~~~~~~~~~~~gi~via~sp 169 (303)
+|+..+-.-- ....++...|+++|+.++..+.
T Consensus 298 v~ik~~~~GGite~~~i~~~A~~~gi~~~~h~~ 330 (398)
T 2pp0_A 298 VQPDAPRVGGISPFLKIMDLAAKHGRKLAPHFA 330 (398)
T ss_dssp ECCCHHHHTSHHHHHHHHHHHHHTTCEECCCSC
T ss_pred EEeCccccCCHHHHHHHHHHHHHcCCeEeecCc
Confidence 7776554311 1135789999999999986654
No 84
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=40.94 E-value=1.6e+02 Score=25.79 Aligned_cols=139 Identities=13% Similarity=0.026 Sum_probs=81.4
Q ss_pred HHHHHHHcCCceeehH--h---HH----HHHHHhccCCCCccceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCcccE
Q 022088 13 LLTWLIYMGLLKISMA--S---SS----IEFVERGHQSSWIRSEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDM 83 (303)
Q Consensus 13 lv~~Al~~Gi~~~DtA--~---~y----~~~~~~~~~~~~r~~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iDl 83 (303)
..+.+.+.|++.|..- . .. +. ..++..+. ++-|.-+.. ..++.+...+-++. |+.+|+++
T Consensus 153 ~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~-avr~a~G~---d~~l~vDan---~~~~~~~a~~~~~~-l~~~~i~~--- 221 (371)
T 2ovl_A 153 QADRFLAGGFRAIKMKVGRPDLKEDVDRVS-ALREHLGD---SFPLMVDAN---MKWTVDGAIRAARA-LAPFDLHW--- 221 (371)
T ss_dssp HHHHHHHTTCSCEEEECCCSSHHHHHHHHH-HHHHHHCT---TSCEEEECT---TCSCHHHHHHHHHH-HGGGCCSE---
T ss_pred HHHHHHHcCCCEEEECCCCCCHHHHHHHHH-HHHHHhCC---CCeEEEECC---CCCCHHHHHHHHHH-HHhcCCCE---
Confidence 4556678898887641 0 11 11 11221111 233444442 25577776665554 78777764
Q ss_pred EEEecCCCCCCcHHHHHHHHHHHHHcCCccEEE-ecCCCHHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHHHHHhC
Q 022088 84 LQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVA-LTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTG 161 (303)
Q Consensus 84 ~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iG-vS~~~~~~l~~~~~~~~~~~~~q~~~n~l~~-~~~~~~~~~~~~~g 161 (303)
+..|-+. +-++.+.++++.-.|-=.+ =+.++.+.++++++. ...+++|+..+-.-- ....++...|+++|
T Consensus 222 --iEqP~~~-----~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~-~~~d~v~ik~~~~GGi~~~~~i~~~A~~~g 293 (371)
T 2ovl_A 222 --IEEPTIP-----DDLVGNARIVRESGHTIAGGENLHTLYDFHNAVRA-GSLTLPEPDVSNIGGYTTFRKVAALAEANN 293 (371)
T ss_dssp --EECCSCT-----TCHHHHHHHHHHHCSCEEECTTCCSHHHHHHHHHH-TCCSEECCCTTTTTSHHHHHHHHHHHHHTT
T ss_pred --EECCCCc-----ccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHc-CCCCEEeeCccccCCHHHHHHHHHHHHHcC
Confidence 4555322 2355666777654454443 345688999999887 357888887665411 12357899999999
Q ss_pred CeEEeeccc
Q 022088 162 VKLITYGTV 170 (303)
Q Consensus 162 i~via~spl 170 (303)
+.++..+.+
T Consensus 294 i~~~~h~~~ 302 (371)
T 2ovl_A 294 MLLTSHGVH 302 (371)
T ss_dssp CCEEECSCH
T ss_pred CeEccccHH
Confidence 999987654
No 85
>3ihk_A Thiamin pyrophosphokinase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, SMR83; HET: TPP; 3.00A {Streptococcus mutans}
Probab=40.71 E-value=1.5e+02 Score=24.14 Aligned_cols=40 Identities=18% Similarity=0.097 Sum_probs=32.0
Q ss_pred CCHHHHHHHHHhhC-CCCceeeeccCCCCHhHHHHhHhhhc
Q 022088 230 VSIPVVAVRYILDQ-PAVAGSMIGVRLGLAEHIQDTNAIFM 269 (303)
Q Consensus 230 ~s~~qlal~~~l~~-~~v~~vi~G~~~~~~~~l~en~~a~~ 269 (303)
-|=.++|++|++.+ +.-..++.|+.-.+.+|.-.|+..+-
T Consensus 73 ~TD~e~Al~~a~~~~~~~~I~i~Ga~GGR~DH~lani~lL~ 113 (218)
T 3ihk_A 73 DTDTELALKTIFDCFGRVEIIVFGAFGGRIDHMLSNIFLPS 113 (218)
T ss_dssp SCHHHHHHHHHHHHTSSCEEEEESCSSSCHHHHHHHHTGGG
T ss_pred CCHHHHHHHHHHHhCCCCEEEEECCCCCchhhHHHHHHHHH
Confidence 35678889998887 55567789998789999999998764
No 86
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genom center for structural genomics of infectious diseases; HET: MSE ACO; 1.90A {Bacillus anthracis} SCOP: c.140.1.0 PDB: 3slf_A* 3n0s_A* 3slb_A* 3n0m_A* 3kzl_A* 3e4f_A*
Probab=40.65 E-value=36 Score=28.96 Aligned_cols=53 Identities=17% Similarity=0.105 Sum_probs=38.0
Q ss_pred HHHHHHHHhhcCCCcccEEEEecCCCCC----CcHHHHHHHHHHHHH-cCCccEEEec
Q 022088 66 RESIDVSRRRMDVPCLDMLQFHWWDYSN----PGYLDALNHLTDLKE-EGKIKTVALT 118 (303)
Q Consensus 66 ~~sve~SL~~Lg~d~iDl~~lH~~~~~~----~~~~~~~~al~~l~~-~G~ir~iGvS 118 (303)
++++.+.|++||+..=|.+++|..-... ..-+.++++|.+++. +|-+-.-..+
T Consensus 17 ~~~l~~~L~~LGi~~Gd~llVHsSl~~lG~v~gg~~~vi~AL~~~vg~~GTLvmPt~t 74 (268)
T 3ijw_A 17 IKTITNDLRKLGLKKGMTVIVHSSLSSIGWISGGAVAVVEALMEVITEEGTIIMPTQS 74 (268)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEEECTGGGCCBTTHHHHHHHHHHHHHCTTSEEEEECCC
T ss_pred HHHHHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhCCCCeEEEeccc
Confidence 4677888999999999999999853221 123578889988875 6766554443
No 87
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=40.37 E-value=37 Score=29.95 Aligned_cols=100 Identities=7% Similarity=-0.005 Sum_probs=61.7
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEE-EecCCCHHHHHHHHHcCCCeee
Q 022088 59 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTV-ALTNFDTERLRIILENGIPVVS 137 (303)
Q Consensus 59 ~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~i-GvS~~~~~~l~~~~~~~~~~~~ 137 (303)
.++.+. .+-++ .|+.+++++ +..|-+. +.++.+.+++++-.|-=. |=+.++++.++++++. ...++
T Consensus 193 ~~~~~~-~~~~~-~l~~~~i~~-----iE~P~~~-----~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~-~~~d~ 259 (368)
T 1sjd_A 193 AYTLGD-APQLA-RLDPFGLLL-----IEQPLEE-----EDVLGHAELARRIQTPICLDESIVSARAAADAIKL-GAVQI 259 (368)
T ss_dssp CCCGGG-HHHHH-TTGGGCCSE-----EECCSCT-----TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHT-TCCSE
T ss_pred CCCHHH-HHHHH-HHHhcCCCe-----EeCCCCh-----hhHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHc-CCCCE
Confidence 456666 44443 377777654 4555322 235667777776554433 3345788999999886 35788
Q ss_pred eccccccccc-ChhhhHHHHHHHhCCeEEeecccc
Q 022088 138 NQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVM 171 (303)
Q Consensus 138 ~q~~~n~l~~-~~~~~~~~~~~~~gi~via~spl~ 171 (303)
+|+..+-.-- ....++...|+++|+.++.-+-+.
T Consensus 260 v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~e 294 (368)
T 1sjd_A 260 VNIKPGRVGGYLEARRVHDVCAAHGIPVWCGGMIE 294 (368)
T ss_dssp EEECTTTTTSHHHHHHHHHHHHHTTCCEEECCCCC
T ss_pred EEecccccCCHHHHHHHHHHHHHcCCcEEeCCccc
Confidence 8886654311 113578999999999965544333
No 88
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=39.52 E-value=34 Score=30.33 Aligned_cols=99 Identities=11% Similarity=-0.008 Sum_probs=60.3
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHHcCCCeee
Q 022088 59 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVS 137 (303)
Q Consensus 59 ~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~ 137 (303)
.++.+. .+-++. |+.+++++| ..|-+. +.++.+.+++++-.|- ..|=+.++.++++++++. ...++
T Consensus 199 ~~~~~~-~~~~~~-l~~~~i~~i-----EqP~~~-----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~-~~~d~ 265 (375)
T 1r0m_A 199 AYTLAD-AGRLRQ-LDEYDLTYI-----EQPLAW-----DDLVDHAELARRIRTPLCLDESVASASDARKALAL-GAGGV 265 (375)
T ss_dssp CCCGGG-HHHHHT-TGGGCCSCE-----ECCSCT-----TCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHH-TSCSE
T ss_pred CCCHHH-HHHHHH-HHhCCCcEE-----ECCCCc-----ccHHHHHHHHHhCCCCEEecCccCCHHHHHHHHHh-CCCCE
Confidence 446665 444433 677666554 455322 2245667777654443 334455788999999886 35788
Q ss_pred eccccccccc-ChhhhHHHHHHHhCCeEEeeccc
Q 022088 138 NQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTV 170 (303)
Q Consensus 138 ~q~~~n~l~~-~~~~~~~~~~~~~gi~via~spl 170 (303)
+|+..+-.-- ....++...|+++|+.++.-+-+
T Consensus 266 v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~ 299 (375)
T 1r0m_A 266 INLKVARVGGHAESRRVHDVAQSFGAPVWCGGML 299 (375)
T ss_dssp EEECTTTTTSHHHHHHHHHHHHHTTCCEEECCCC
T ss_pred EEECcchhcCHHHHHHHHHHHHHcCCcEEecCcc
Confidence 8887654311 11357899999999996554433
No 89
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=39.43 E-value=54 Score=29.22 Aligned_cols=100 Identities=9% Similarity=-0.072 Sum_probs=64.1
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEEec-CCCHHHHHHHHHcCCCeee
Q 022088 59 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALT-NFDTERLRIILENGIPVVS 137 (303)
Q Consensus 59 ~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS-~~~~~~l~~~~~~~~~~~~ 137 (303)
.++.+...+-++. |+.++ +.++..|-+. +.++.+.++++.-.|-=.+-- .++++.++++++. ...++
T Consensus 209 ~~~~~~a~~~~~~-l~~~~-----i~~iE~P~~~-----~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~-~~~d~ 276 (392)
T 2poz_A 209 GLTTDETIRFCRK-IGELD-----ICFVEEPCDP-----FDNGALKVISEQIPLPIAVGERVYTRFGFRKIFEL-QACGI 276 (392)
T ss_dssp CSCHHHHHHHHHH-HGGGC-----EEEEECCSCT-----TCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHTT-TCCSE
T ss_pred CCCHHHHHHHHHH-HHhcC-----CCEEECCCCc-----ccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHc-CCCCE
Confidence 5577766655554 66654 4456665332 235667777776566544443 3567888888876 34788
Q ss_pred eccccccccc-ChhhhHHHHHHHhCCeEEeeccc
Q 022088 138 NQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTV 170 (303)
Q Consensus 138 ~q~~~n~l~~-~~~~~~~~~~~~~gi~via~spl 170 (303)
+|+..+-.-- ....++...|+++|+.++..+..
T Consensus 277 v~ik~~~~GGit~~~~i~~~A~~~g~~~~~h~~~ 310 (392)
T 2poz_A 277 IQPDIGTAGGLMETKKICAMAEAYNMRVAPHVCG 310 (392)
T ss_dssp ECCCTTTSSCHHHHHHHHHHHHTTTCEECCCCCS
T ss_pred EecCccccCCHHHHHHHHHHHHHcCCeEecCCCC
Confidence 8887654311 11347899999999999887654
No 90
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=39.38 E-value=1.4e+02 Score=24.31 Aligned_cols=35 Identities=11% Similarity=0.205 Sum_probs=21.6
Q ss_pred ceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEe
Q 022088 46 SEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFH 87 (303)
Q Consensus 46 ~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iDl~~lH 87 (303)
++-++|-.... .+ +...++ .++++|.+.|++...+
T Consensus 11 klg~~~~~~~~---~~---~~~~l~-~~~~~G~~~vEl~~~~ 45 (262)
T 3p6l_A 11 RLGMQSYSFHL---FP---LTEALD-KTQELGLKYIEIYPGH 45 (262)
T ss_dssp EEEEEGGGGTT---SC---HHHHHH-HHHHTTCCEEEECTTE
T ss_pred EEEEEecccCC---CC---HHHHHH-HHHHcCCCEEeecCCc
Confidence 56666666543 23 333333 3577999999987654
No 91
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=39.17 E-value=1.1e+02 Score=25.89 Aligned_cols=93 Identities=6% Similarity=-0.070 Sum_probs=60.0
Q ss_pred HHHHHHHHcCCceeehHhHHHHHHHhccCCCCccceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEecCCC
Q 022088 12 PLLTWLIYMGLLKISMASSSIEFVERGHQSSWIRSEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDY 91 (303)
Q Consensus 12 ~lv~~Al~~Gi~~~DtA~~y~~~~~~~~~~~~r~~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~ 91 (303)
.+++.|.+.|+.-+-.-+.|+..+....... ++-|+|=++.+.+..+.+.-...+++.++ .|-|-||++.==.. .
T Consensus 63 ~lc~eA~~~~~aaVCV~p~~V~~a~~~L~gs---~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~-~GAdEIDmViNig~-l 137 (260)
T 3r12_A 63 KLCLEARENRFHGVCVNPCYVKLAREELEGT---DVKVVTVVGFPLGANETRTKAHEAIFAVE-SGADEIDMVINVGM-L 137 (260)
T ss_dssp HHHHHHHHTTCSEEEECGGGHHHHHHHHTTS---CCEEEEEESTTTCCSCHHHHHHHHHHHHH-HTCSEEEEECCHHH-H
T ss_pred HHHHHHHhcCCcEEEECHHHHHHHHHHhcCC---CCeEEEEecCCCCCCcHHHHHHHHHHHHH-cCCCEEEEEeehhh-h
Confidence 5788999999988888888877543332111 57788877776666666666667777777 59999999732111 1
Q ss_pred CCCcHHHHHHHHHHHHHc
Q 022088 92 SNPGYLDALNHLTDLKEE 109 (303)
Q Consensus 92 ~~~~~~~~~~al~~l~~~ 109 (303)
...+++.+.+.+..+++.
T Consensus 138 k~g~~~~v~~eI~~v~~a 155 (260)
T 3r12_A 138 KAKEWEYVYEDIRSVVES 155 (260)
T ss_dssp HTTCHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHh
Confidence 112245555566655543
No 92
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=39.06 E-value=37 Score=30.08 Aligned_cols=102 Identities=6% Similarity=-0.058 Sum_probs=63.5
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHHcCCCeee
Q 022088 59 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVS 137 (303)
Q Consensus 59 ~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~ 137 (303)
.++.+...+ +-+.|+.+|++ ++..|-+. +.++.+.++++.-.|. ..|=+.++.+.+++++.. ..+++
T Consensus 195 ~~~~~~a~~-~~~~l~~~~i~-----~iEqP~~~-----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~-~~~d~ 262 (367)
T 3dg3_A 195 GWSAAESLR-AMREMADLDLL-----FAEELCPA-----DDVLSRRRLVGQLDMPFIADESVPTPADVTREVLG-GSATA 262 (367)
T ss_dssp CSCHHHHHH-HHHHTTTSCCS-----CEESCSCT-----TSHHHHHHHHHHCSSCEEECTTCSSHHHHHHHHHH-TSCSE
T ss_pred CCCHHHHHH-HHHHHHHhCCC-----EEECCCCc-----ccHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHc-CCCCE
Confidence 445554432 22345555544 45555332 2245677777765554 445566789999998886 34777
Q ss_pred ecccccccccCh-hhhHHHHHHHhCCeEEeecccccc
Q 022088 138 NQVQHSVVDMRP-QQKMAELCQLTGVKLITYGTVMGG 173 (303)
Q Consensus 138 ~q~~~n~l~~~~-~~~~~~~~~~~gi~via~spl~~G 173 (303)
+|+..+-. --. ...+...|+++|+.++..+.+.+|
T Consensus 263 v~~k~~~~-Git~~~~ia~~A~~~gi~~~~~~~~es~ 298 (367)
T 3dg3_A 263 ISIKTART-GFTGSTRVHHLAEGLGLDMVMGNQIDGQ 298 (367)
T ss_dssp EEECHHHH-TTHHHHHHHHHHHHHTCEEEECCSSCCH
T ss_pred EEeehhhh-hHHHHHHHHHHHHHcCCeEEECCcCCcH
Confidence 88876654 221 346899999999999977655444
No 93
>2lr8_A CAsp8-associated protein 2; structural genomics, northeast structural genomics consortiu PSI-biology, apoptosis; NMR {Homo sapiens}
Probab=45.06 E-value=6.4 Score=26.00 Aligned_cols=26 Identities=15% Similarity=0.160 Sum_probs=15.3
Q ss_pred cccChhhhHHHHHHHhCCeEEeeccc
Q 022088 145 VDMRPQQKMAELCQLTGVKLITYGTV 170 (303)
Q Consensus 145 l~~~~~~~~~~~~~~~gi~via~spl 170 (303)
+.+..++.++..|++.|-.--.|..+
T Consensus 17 WTReeDR~IL~~cq~~G~s~~tfa~i 42 (70)
T 2lr8_A 17 WTRNDDRVILLECQKRGPSSKTFAYL 42 (70)
Confidence 34555667888888876433333333
No 94
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=38.75 E-value=49 Score=29.46 Aligned_cols=103 Identities=9% Similarity=0.046 Sum_probs=63.6
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCc-cEEEecCCCHHHHHHHHHcCCCeee
Q 022088 59 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVS 137 (303)
Q Consensus 59 ~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~ 137 (303)
.++.+...+ +-+.|+.+|+++ +..|-+. +-++.+.++++.-.| -..|=+.++.++++++++. ..+++
T Consensus 204 ~~~~~~A~~-~~~~l~~~~i~~-----iEqP~~~-----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~-~~~d~ 271 (383)
T 3i4k_A 204 RWDRRTALH-YLPILAEAGVEL-----FEQPTPA-----DDLETLREITRRTNVSVMADESVWTPAEALAVVKA-QAADV 271 (383)
T ss_dssp CSCHHHHHH-HHHHHHHTTCCE-----EESCSCT-----TCHHHHHHHHHHHCCEEEESTTCSSHHHHHHHHHH-TCCSE
T ss_pred CCCHHHHHH-HHHHHHhcCCCE-----EECCCCh-----hhHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHc-CCCCE
Confidence 456655443 335667776554 4455332 124556666665333 3445566788999998886 34778
Q ss_pred eccccccccc-ChhhhHHHHHHHhCCeEEeecccccc
Q 022088 138 NQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 173 (303)
Q Consensus 138 ~q~~~n~l~~-~~~~~~~~~~~~~gi~via~spl~~G 173 (303)
+|+..+..-- ..-..+...|+++|+.++..+.+..|
T Consensus 272 v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es~ 308 (383)
T 3i4k_A 272 IALKTTKHGGLLESKKIAAIAEAGGLACHGATSLEGP 308 (383)
T ss_dssp EEECTTTTTSHHHHHHHHHHHHHTTCEEEECCSCCCH
T ss_pred EEEcccccCCHHHHHHHHHHHHHcCCeEEeCCCCccH
Confidence 8887655411 12356889999999999877665444
No 95
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=38.65 E-value=1.8e+02 Score=24.60 Aligned_cols=74 Identities=15% Similarity=0.012 Sum_probs=53.3
Q ss_pred CCCCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCc-cEEEecCCCHHHHHHHHHcC
Q 022088 57 PVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENG 132 (303)
Q Consensus 57 ~~~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~ 132 (303)
.+..+.+......+-..+-+|++.|-+=.+.......++..+++++.+.|+++|.. -.+ ++.++...+++.+.+
T Consensus 71 aG~~taeeAv~~a~lare~~gt~~iKlEvi~d~~~l~pD~~~tv~aa~~L~k~Gf~Vlpy--~~~D~~~ak~l~~~G 145 (268)
T 2htm_A 71 AGARTAEEAVRLARLGRLLTGERWVKLEVIPDPTYLLPDPLETLKAAERLIEEDFLVLPY--MGPDLVLAKRLAALG 145 (268)
T ss_dssp TTCCSHHHHHHHHHHHHHHHCCSEEBCCCCSCTTTTCCCHHHHHHHHHHHHHTTCEECCE--ECSCHHHHHHHHHHT
T ss_pred cCCCCHHHHHHHHHhhhHhcCcceeeeeeccCccccCcCHHHHHHHHHHHHHCCCEEeec--cCCCHHHHHHHHhcC
Confidence 34568888888888788889999877555555555567788999999999999953 322 245666666666543
No 96
>2nyg_A YOKD protein; PFAM02522, NYSGXRC, aminoglycoside 3-N- acetyltransferase, PSI-2, structural genomics, protein structure initiative; HET: COA; 2.60A {Bacillus subtilis} SCOP: c.140.1.2
Probab=38.50 E-value=44 Score=28.48 Aligned_cols=50 Identities=22% Similarity=0.186 Sum_probs=35.6
Q ss_pred HHHHHHHHhhcCCCcccEEEEecCCCC----CCcHHHHHHHHHHHHH-cCCccEE
Q 022088 66 RESIDVSRRRMDVPCLDMLQFHWWDYS----NPGYLDALNHLTDLKE-EGKIKTV 115 (303)
Q Consensus 66 ~~sve~SL~~Lg~d~iDl~~lH~~~~~----~~~~~~~~~al~~l~~-~G~ir~i 115 (303)
++++.+.|+.||+..=|.+++|..-.. ...-+.++++|.+++. +|-+-.=
T Consensus 15 ~~~L~~~L~~LGI~~Gd~llVHsSl~~lG~v~gg~~~vi~AL~~~vg~~GTLvmP 69 (273)
T 2nyg_A 15 KQSITEDLKALGLKKGMTVLVHSSLSSIGWVNGGAVAVIQALIDVVTEEGTIVMP 69 (273)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEEECSGGGCCBTTHHHHHHHHHHHHHTTTSEEEEE
T ss_pred HHHHHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhCCCCeEEEe
Confidence 456778889999999999999985221 1223578899988774 6655443
No 97
>4ggi_A UDP-2,3-diacylglucosamine pyrophosphatase LPXI; structural genomics, PSI-biology; HET: UDG; 2.52A {Caulobacter crescentus} PDB: 4ggm_X*
Probab=38.01 E-value=58 Score=27.80 Aligned_cols=47 Identities=6% Similarity=0.081 Sum_probs=38.6
Q ss_pred HHHHHHHHHcCCCeeeecccccccccChhhhHHHHHHHhCCeEEeeccc
Q 022088 122 TERLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTV 170 (303)
Q Consensus 122 ~~~l~~~~~~~~~~~~~q~~~n~l~~~~~~~~~~~~~~~gi~via~spl 170 (303)
++.++.+.++|..-.++|..-|++-+ .++++++|.++||.+++..|=
T Consensus 234 ~dti~~~~~ag~~~ivi~~g~si~~~--~~~~i~~a~~~gi~~~~~~~~ 280 (283)
T 4ggi_A 234 VATIHRAARAGLAGIVGEAGRLLVVD--REAVIAAADDLGLFVLGVDPQ 280 (283)
T ss_dssp HHHHHHHHHTTCCEEEEETTBCEETT--HHHHHHHHHHHTCEEEEECC-
T ss_pred HHHHHHHHHcCCeEEEEcCCCcEEeC--HHHHHHHHHHcCCEEEEeCCC
Confidence 68888888888877788999998633 457999999999999988763
No 98
>3mel_A Thiamin pyrophosphokinase family protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium; HET: TPP; 2.79A {Enterococcus faecalis}
Probab=37.72 E-value=1.6e+02 Score=23.90 Aligned_cols=40 Identities=15% Similarity=0.111 Sum_probs=31.7
Q ss_pred CCHHHHHHHHHhhCCCC-ceeeeccCCCCHhHHHHhHhhhc
Q 022088 230 VSIPVVAVRYILDQPAV-AGSMIGVRLGLAEHIQDTNAIFM 269 (303)
Q Consensus 230 ~s~~qlal~~~l~~~~v-~~vi~G~~~~~~~~l~en~~a~~ 269 (303)
-|-.++|++++..++.- ..++.|+.-.+.+|.-.|+..+-
T Consensus 77 ~TD~e~Al~~~~~~~~~~~I~i~Ga~GgRlDH~lani~lL~ 117 (222)
T 3mel_A 77 DTDTQLALQEALQRFPQAEMTIIGATGGRIDHLLANLWLPF 117 (222)
T ss_dssp SCHHHHHHHHHHHHCTTSEEEEECCCSSCHHHHHHHHTGGG
T ss_pred CCHHHHHHHHHHHhCCCceEEEEccCCCCHHHHHHHHHHHH
Confidence 45667889998887664 67788998778999999997763
No 99
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=37.58 E-value=2e+02 Score=24.87 Aligned_cols=91 Identities=11% Similarity=-0.032 Sum_probs=46.9
Q ss_pred eEEEccccCCC---CCCCHHHHHHHHHHHHhhcCCCcccEEEEecCCC--CCCcHHHHHHHHHHHHHcCCccEEEecCC-
Q 022088 47 EGDLTKWVPPP---VKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDY--SNPGYLDALNHLTDLKEEGKIKTVALTNF- 120 (303)
Q Consensus 47 ~~I~tK~~~~~---~~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~--~~~~~~~~~~al~~l~~~G~ir~iGvS~~- 120 (303)
+-|.-|+.+.. ...+.+... .+-+.|+..|+|||++---..... .... ...++.+.++++.=.+--+++...
T Consensus 210 ~pv~vris~~~~~~~g~~~~~~~-~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~-~~~~~~~~~ir~~~~iPVi~~Ggi~ 287 (338)
T 1z41_A 210 GPLFVRVSASDYTDKGLDIADHI-GFAKWMKEQGVDLIDCSSGALVHADINVFP-GYQVSFAEKIREQADMATGAVGMIT 287 (338)
T ss_dssp SCEEEEEECCCCSTTSCCHHHHH-HHHHHHHHTTCCEEEEECCCSSCCCCCCCT-TTTHHHHHHHHHHHCCEEEECSSCC
T ss_pred CcEEEEecCcccCCCCCCHHHHH-HHHHHHHHcCCCEEEEecCccccCCCCCCc-cchHHHHHHHHHHCCCCEEEECCCC
Confidence 45666766531 234555433 344567778877776532111000 0110 112344455555445666777765
Q ss_pred CHHHHHHHHHcCCCeeeecc
Q 022088 121 DTERLRIILENGIPVVSNQV 140 (303)
Q Consensus 121 ~~~~l~~~~~~~~~~~~~q~ 140 (303)
+++..+++++.+ ..+.+++
T Consensus 288 s~~~a~~~l~~G-~aD~V~i 306 (338)
T 1z41_A 288 DGSMAEEILQNG-RADLIFI 306 (338)
T ss_dssp SHHHHHHHHHTT-SCSEEEE
T ss_pred CHHHHHHHHHcC-CceEEee
Confidence 678888888763 2344443
No 100
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=37.33 E-value=67 Score=28.77 Aligned_cols=98 Identities=11% Similarity=0.053 Sum_probs=63.5
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHHcCCCeee
Q 022088 59 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVS 137 (303)
Q Consensus 59 ~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~ 137 (303)
.++.+...+-+ +.|+.+++++ +..|-+. +.++.+.++++.-.|. ..|=+.++.+.++++++.+ +++
T Consensus 201 ~~~~~~A~~~~-~~L~~~~i~~-----iEqP~~~-----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~--~d~ 267 (393)
T 4dwd_A 201 GYSVGGAIRVG-RALEDLGYSW-----FEEPVQH-----YHVGAMGEVAQRLDITVSAGEQTYTLQALKDLILSG--VRM 267 (393)
T ss_dssp CCCHHHHHHHH-HHHHHTTCSE-----EECCSCT-----TCHHHHHHHHHHCSSEEEBCTTCCSHHHHHHHHHHT--CCE
T ss_pred CCCHHHHHHHH-HHHHhhCCCE-----EECCCCc-----ccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcC--CCE
Confidence 45665544333 4566776554 4455322 1246677777765543 3344567889999998874 888
Q ss_pred eccccccccc-ChhhhHHHHHHHhCCeEEeecc
Q 022088 138 NQVQHSVVDM-RPQQKMAELCQLTGVKLITYGT 169 (303)
Q Consensus 138 ~q~~~n~l~~-~~~~~~~~~~~~~gi~via~sp 169 (303)
+|+..+-.-- .....+...|+++|+.++..+.
T Consensus 268 v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 300 (393)
T 4dwd_A 268 VQPDIVKMGGITGMMQCAALAHAHGVEFVPHQT 300 (393)
T ss_dssp ECCCTTTTTHHHHHHHHHHHHHHHTCEECCCCC
T ss_pred EEeCccccCCHHHHHHHHHHHHHcCCEEeecCC
Confidence 8888765411 1235789999999999998776
No 101
>1y7y_A C.AHDI; helix-turn-helix, DNA-binding protein, transcriptional regulator, transcription regulator; 1.69A {Aeromonas hydrophila} SCOP: a.35.1.3
Probab=37.27 E-value=20 Score=22.91 Aligned_cols=25 Identities=20% Similarity=0.179 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHH
Q 022088 216 VLLQTLKRIASKHGVSIPVVAVRYI 240 (303)
Q Consensus 216 ~~~~~l~~ia~~~g~s~~qlal~~~ 240 (303)
...+.++.+-++.|+|..++|-+--
T Consensus 13 ~~~~~l~~~r~~~g~s~~~lA~~~g 37 (74)
T 1y7y_A 13 KFGQRLRELRTAKGLSQETLAFLSG 37 (74)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHC
Confidence 4457788888888999888776553
No 102
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=37.03 E-value=53 Score=29.50 Aligned_cols=101 Identities=11% Similarity=-0.083 Sum_probs=64.9
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCc-cEEEecCCCHHHHHHHHHcCCCeee
Q 022088 59 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVS 137 (303)
Q Consensus 59 ~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~ 137 (303)
.++.+. .+ +-+.|+.+++++| ..|-+. +.++.+.++++.-.| -..|=|.++.+.++.+++. ..+++
T Consensus 215 ~w~~~~-~~-~~~~l~~~~i~~i-----EqP~~~-----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~-~~~d~ 281 (400)
T 3mwc_A 215 SFELDQ-WE-TFKAMDAAKCLFH-----EQPLHY-----EALLDLKELGERIETPICLDESLISSRVAEFVAKL-GISNI 281 (400)
T ss_dssp CCCGGG-HH-HHHHHGGGCCSCE-----ESCSCT-----TCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHT-TCCSE
T ss_pred CCCHHH-HH-HHHHHHhcCCCEE-----eCCCCh-----hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhc-CCCCE
Confidence 445555 33 3356777776554 455322 235667777776444 3556667889999999886 34777
Q ss_pred eccccccccc-ChhhhHHHHHHHhCCeEEeeccccc
Q 022088 138 NQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMG 172 (303)
Q Consensus 138 ~q~~~n~l~~-~~~~~~~~~~~~~gi~via~spl~~ 172 (303)
+|+..+-.-- .....+...|+++|+.++..+.+..
T Consensus 282 v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es 317 (400)
T 3mwc_A 282 WNIKIQRVGGLLEAIKIYKIATDNGIKLWGGTMPES 317 (400)
T ss_dssp EEECHHHHTSHHHHHHHHHHHHHTTCEEEECCSCCC
T ss_pred EEEcchhhCCHHHHHHHHHHHHHcCCEEEecCCCCC
Confidence 8877654311 1235789999999999987765544
No 103
>2ewt_A BLDD, putative DNA-binding protein; the DNA-binding domain of BLDD; 1.81A {Streptomyces coelicolor}
Probab=36.99 E-value=21 Score=22.66 Aligned_cols=23 Identities=26% Similarity=0.356 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHH
Q 022088 217 LLQTLKRIASKHGVSIPVVAVRY 239 (303)
Q Consensus 217 ~~~~l~~ia~~~g~s~~qlal~~ 239 (303)
.-+.++.+-++.|+|..++|-+-
T Consensus 9 ~g~~l~~~r~~~glsq~~lA~~~ 31 (71)
T 2ewt_A 9 LGAKLRAIRTQQGLSLHGVEEKS 31 (71)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCHHHHHHHH
Confidence 44778888888899988877653
No 104
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=36.92 E-value=64 Score=29.22 Aligned_cols=97 Identities=9% Similarity=0.016 Sum_probs=64.1
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCC-ccEE-EecCCCHHHHHHHHHcCCCee
Q 022088 59 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGK-IKTV-ALTNFDTERLRIILENGIPVV 136 (303)
Q Consensus 59 ~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~-ir~i-GvS~~~~~~l~~~~~~~~~~~ 136 (303)
.++.+...+-++. |+.+++++| ..|-+. +.++.+.+++++-. |-=. |=+.++.+.++++++. ...+
T Consensus 239 ~~~~~eai~~~~~-L~~~~i~~i-----EqP~~~-----~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~-~~~d 306 (428)
T 3bjs_A 239 AYTMADARRVLPV-LAEIQAGWL-----EEPFAC-----NDFASYREVAKITPLVPIAAGENHYTRFEFGQMLDA-GAVQ 306 (428)
T ss_dssp CCCHHHHHHHHHH-HHHTTCSCE-----ECCSCT-----TCHHHHHHHTTTCSSSCEEECTTCCSHHHHHHHHTT-CCEE
T ss_pred CCCHHHHHHHHHH-HHhcCCCEE-----ECCCCc-----cCHHHHHHHHHhCCCCcEEcCCCcCCHHHHHHHHHh-CCCC
Confidence 5677777666655 888887754 454321 23566777776544 4333 3445678999998876 4588
Q ss_pred eeccccccccc-ChhhhHHHHHHHhCCeEEee
Q 022088 137 SNQVQHSVVDM-RPQQKMAELCQLTGVKLITY 167 (303)
Q Consensus 137 ~~q~~~n~l~~-~~~~~~~~~~~~~gi~via~ 167 (303)
++|+..+-.-- ....++...|+++|+.++..
T Consensus 307 ~v~ik~~~~GGitea~~ia~~A~~~gi~~~~~ 338 (428)
T 3bjs_A 307 VWQPDLSKCGGITEGIRIAAMASAYRIPINAH 338 (428)
T ss_dssp EECCBTTTSSCHHHHHHHHHHHHHTTCCBCCB
T ss_pred EEEeCccccCCHHHHHHHHHHHHHcCCeEEec
Confidence 88887665411 11357899999999998877
No 105
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=36.53 E-value=74 Score=25.67 Aligned_cols=74 Identities=8% Similarity=-0.023 Sum_probs=46.2
Q ss_pred CHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEEec-CCCHHHHHHHHHcCCCeeeec
Q 022088 61 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALT-NFDTERLRIILENGIPVVSNQ 139 (303)
Q Consensus 61 ~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS-~~~~~~l~~~~~~~~~~~~~q 139 (303)
+++.++.. .++|.||+=+.+. .+.+-.-. .+....|.+.. ...+..+||- |.+++.+.++... ..++++|
T Consensus 10 ~~eda~~a-----~~~GaD~iGfif~-~~SpR~V~-~~~a~~i~~~~-~~~~~~VgVfvn~~~~~i~~~~~~-~~ld~vQ 80 (203)
T 1v5x_A 10 RLEDALLA-----EALGAFALGFVLA-PGSRRRIA-PEAARAIGEAL-GPFVVRVGVFRDQPPEEVLRLMEE-ARLQVAQ 80 (203)
T ss_dssp CHHHHHHH-----HHHTCSEEEEECC-TTCTTBCC-HHHHHHHHHHS-CSSSEEEEEESSCCHHHHHHHHHH-TTCSEEE
T ss_pred cHHHHHHH-----HHcCCCEEEEEec-CCCCCcCC-HHHHHHHHHhC-CCCCCEEEEEeCCCHHHHHHHHHh-hCCCEEE
Confidence 44555444 3689999888843 22222222 23333333222 2468999987 5688888888886 6799999
Q ss_pred cccc
Q 022088 140 VQHS 143 (303)
Q Consensus 140 ~~~n 143 (303)
++-+
T Consensus 81 LHG~ 84 (203)
T 1v5x_A 81 LHGE 84 (203)
T ss_dssp ECSC
T ss_pred ECCC
Confidence 9743
No 106
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=35.92 E-value=1e+02 Score=27.50 Aligned_cols=110 Identities=7% Similarity=-0.079 Sum_probs=69.7
Q ss_pred ceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEEe-cCCCHHH
Q 022088 46 SEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVAL-TNFDTER 124 (303)
Q Consensus 46 ~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGv-S~~~~~~ 124 (303)
++-|.-... ..++.+...+-++. |+.+++++| ..|-+. +.++.+.++++.-.|-=.+- +.++++.
T Consensus 215 d~~l~vDan---~~~~~~~a~~~~~~-l~~~~i~~i-----E~P~~~-----~~~~~~~~l~~~~~iPIa~dE~~~~~~~ 280 (407)
T 2o56_A 215 DVDIIAEMH---AFTDTTSAIQFGRM-IEELGIFYY-----EEPVMP-----LNPAQMKQVADKVNIPLAAGERIYWRWG 280 (407)
T ss_dssp TSEEEEECT---TCSCHHHHHHHHHH-HGGGCCSCE-----ECSSCS-----SSHHHHHHHHHHCCSCEEECTTCCHHHH
T ss_pred CCEEEEECC---CCCCHHHHHHHHHH-HHhcCCCEE-----eCCCCh-----hhHHHHHHHHHhCCCCEEeCCCcCCHHH
Confidence 344444442 25677777666664 888877654 444322 23566777777655554443 3456788
Q ss_pred HHHHHHcCCCeeeeccccccccc-ChhhhHHHHHHHhCCeEEeeccc
Q 022088 125 LRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTV 170 (303)
Q Consensus 125 l~~~~~~~~~~~~~q~~~n~l~~-~~~~~~~~~~~~~gi~via~spl 170 (303)
++++++. ...+++|+..+-.-- ....++..+|+++|+.++..+..
T Consensus 281 ~~~~i~~-~~~d~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h~~~ 326 (407)
T 2o56_A 281 YRPFLEN-GSLSVIQPDICTCGGITEVKKICDMAHVYDKTVQIHVCG 326 (407)
T ss_dssp HHHHHHT-TCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEECCCCCS
T ss_pred HHHHHHc-CCCCEEecCccccCCHHHHHHHHHHHHHcCCeEeecCCC
Confidence 8888876 357888887665311 11347899999999999887663
No 107
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=35.77 E-value=86 Score=25.69 Aligned_cols=81 Identities=9% Similarity=0.128 Sum_probs=50.4
Q ss_pred HHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEEecC-CCHHHHHHHHHcCCCeeeeccccccccc
Q 022088 69 IDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTN-FDTERLRIILENGIPVVSNQVQHSVVDM 147 (303)
Q Consensus 69 ve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS~-~~~~~l~~~~~~~~~~~~~q~~~n~l~~ 147 (303)
+-+.|-.-|.+.|.+ - ...+ ..++.++.++++=----||..+ .+.++++.+++.|-+|.+. +
T Consensus 30 ~a~al~~gGi~~iEv---t---~~t~---~a~~~I~~l~~~~p~~~IGAGTVlt~~~a~~ai~AGA~fivs--------P 92 (217)
T 3lab_A 30 MAKALVAGGVHLLEV---T---LRTE---AGLAAISAIKKAVPEAIVGAGTVCTADDFQKAIDAGAQFIVS--------P 92 (217)
T ss_dssp HHHHHHHTTCCEEEE---E---TTST---THHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSEEEE--------S
T ss_pred HHHHHHHcCCCEEEE---e---CCCc---cHHHHHHHHHHHCCCCeEeeccccCHHHHHHHHHcCCCEEEe--------C
Confidence 344566667765555 1 1222 3334445555441124677765 5789999999988776643 2
Q ss_pred ChhhhHHHHHHHhCC------eEEe
Q 022088 148 RPQQKMAELCQLTGV------KLIT 166 (303)
Q Consensus 148 ~~~~~~~~~~~~~gi------~via 166 (303)
....+++++|+++|+ .++.
T Consensus 93 ~~~~evi~~~~~~~v~~~~~~~~~P 117 (217)
T 3lab_A 93 GLTPELIEKAKQVKLDGQWQGVFLP 117 (217)
T ss_dssp SCCHHHHHHHHHHHHHCSCCCEEEE
T ss_pred CCcHHHHHHHHHcCCCccCCCeEeC
Confidence 234589999999999 7764
No 108
>3ec1_A YQEH GTPase; atnos1, atnoa1, trap, PVHL, hydrolase, signaling protein; HET: GDP; 2.36A {Geobacillus stearothermophilus}
Probab=35.58 E-value=2e+02 Score=25.25 Aligned_cols=82 Identities=11% Similarity=-0.002 Sum_probs=58.1
Q ss_pred ceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEEecCCCHHHH
Q 022088 46 SEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERL 125 (303)
Q Consensus 46 ~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l 125 (303)
-++|.+|.--.+.....+.+.+.+.+.++.+|....+++.+-.- ... .++++.+.++++.+...|--+|-+|.+...+
T Consensus 101 iilV~NK~DLl~~~~~~~~~~~~l~~~~~~~g~~~~~v~~iSA~-~g~-gi~~L~~~I~~~~~~~~i~~vG~~nvGKStl 178 (369)
T 3ec1_A 101 ILLVGNKADLLPRSVKYPKLLRWMRRMAEELGLCPVDVCLVSAA-KGI-GMAKVMEAINRYREGGDVYVVGCTNVGKSTF 178 (369)
T ss_dssp EEEEEECGGGSCTTCCHHHHHHHHHHHHHTTTCCCSEEEECBTT-TTB-THHHHHHHHHHHHTTSCEEEECCTTSSHHHH
T ss_pred EEEEEEChhcCCCccCHHHHHHHHHHHHHHcCCCcccEEEEECC-CCC-CHHHHHHHHHhhcccCcEEEEcCCCCchHHH
Confidence 68889997532223456777788888888888755566655432 222 3788888998888888899999999988666
Q ss_pred HHHH
Q 022088 126 RIIL 129 (303)
Q Consensus 126 ~~~~ 129 (303)
-..+
T Consensus 179 iN~L 182 (369)
T 3ec1_A 179 INRI 182 (369)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
No 109
>4f3h_A Fimxeal, putative uncharacterized protein; fimxeal-C-DI-GMP, type IV pilus, signaling protein; HET: C2E; 2.50A {Xanthomonas campestris PV} PDB: 4f48_A*
Probab=35.23 E-value=72 Score=26.12 Aligned_cols=115 Identities=13% Similarity=0.132 Sum_probs=68.1
Q ss_pred ceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEE-EecCCCCCCcHHHHHHHHHHHHHcCCccEEEecCCCH--
Q 022088 46 SEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQ-FHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDT-- 122 (303)
Q Consensus 46 ~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iDl~~-lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS~~~~-- 122 (303)
+..++-.+.+. .+....+...+.+.|++.+.+.--+.+ +...... .....+.+.+..|++.|- .+++..|+.
T Consensus 94 ~~~l~iNls~~--~l~~~~~~~~l~~~l~~~~~~~~~l~lEitE~~~~-~~~~~~~~~l~~L~~~G~--~ialDdfG~g~ 168 (250)
T 4f3h_A 94 KTHLLVRIGPN--SFSDPQMIDTIREQLAVYGVPGERLWLQTPESKVF-THLRNAQQFLASVSAMGC--KVGLEQFGSGL 168 (250)
T ss_dssp CCEEEEECCGG--GSSCHHHHHHHHHHHHHTTCCGGGEEEEEEHHHHH-HSHHHHHHHHHHHHTTTC--EEEEEEETSST
T ss_pred CceEEEEeCHH--HhCCcHHHHHHHHHHHHcCCCcceEEEEEechhhh-cCHHHHHHHHHHHHHCCC--EEEEeCCCCCc
Confidence 34566566544 334466788999999999876433322 1211111 114577889999999997 444444432
Q ss_pred HHHHHHHHcCCCeeeecccccccccC--------hhhhHHHHHHHhCCeEEee
Q 022088 123 ERLRIILENGIPVVSNQVQHSVVDMR--------PQQKMAELCQLTGVKLITY 167 (303)
Q Consensus 123 ~~l~~~~~~~~~~~~~q~~~n~l~~~--------~~~~~~~~~~~~gi~via~ 167 (303)
..+..+.. .+++.+-+.-+++..- .-..++..|+..|+.+++=
T Consensus 169 s~l~~L~~--l~~d~iKiD~~~v~~~~~~~~~~~~l~~i~~~a~~l~~~viae 219 (250)
T 4f3h_A 169 DSFQLLAH--FQPAFLKLDRSITGDIASARESQEKIREITSRAQPTGILTVAE 219 (250)
T ss_dssp HHHHHHTT--SCCSEEEECHHHHTTTTTCSHHHHHHHHTHHHHHHHTCEEEEC
T ss_pred hHHHHHhh--CCCCEEEECHHHHHhHhcChhhHHHHHHHHHHHHHcCCEEEEe
Confidence 33433332 4566666664444221 1246788999999998854
No 110
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=35.20 E-value=65 Score=28.91 Aligned_cols=100 Identities=8% Similarity=0.038 Sum_probs=65.1
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEE-ecCCCHHHHHHHHHcCCCeee
Q 022088 59 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVA-LTNFDTERLRIILENGIPVVS 137 (303)
Q Consensus 59 ~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iG-vS~~~~~~l~~~~~~~~~~~~ 137 (303)
.++.+...+-++. |+.+++++ +..|-+. +-++.+.++++.-.|-=.+ =+.++.+.++++++. ...++
T Consensus 220 ~~~~~~a~~~~~~-l~~~~i~~-----iEeP~~~-----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~-~~~d~ 287 (410)
T 2qq6_A 220 RFDIPSSIRFARA-MEPFGLLW-----LEEPTPP-----ENLDALAEVRRSTSTPICAGENVYTRFDFRELFAK-RAVDY 287 (410)
T ss_dssp CCCHHHHHHHHHH-HGGGCCSE-----EECCSCT-----TCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHT-TCCSE
T ss_pred CCCHHHHHHHHHH-HhhcCCCe-----EECCCCh-----hhHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHc-CCCCE
Confidence 5677777666544 77777654 5555322 2356677777765554443 344688999999886 34777
Q ss_pred eccccccccc-ChhhhHHHHHHHhCCeEEeeccc
Q 022088 138 NQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTV 170 (303)
Q Consensus 138 ~q~~~n~l~~-~~~~~~~~~~~~~gi~via~spl 170 (303)
+|+..+-.-- ....++...|+++|+.++..+..
T Consensus 288 v~ik~~~~GGite~~~ia~~A~~~g~~~~~h~~~ 321 (410)
T 2qq6_A 288 VMPDVAKCGGLAEAKRIANLAELDYIPFAPHNVS 321 (410)
T ss_dssp ECCBHHHHTHHHHHHHHHHHHHTTTCCBCCBCCS
T ss_pred EecCccccCCHHHHHHHHHHHHHcCCeEeecCCC
Confidence 8877654311 11346889999999998887663
No 111
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=34.99 E-value=1.2e+02 Score=25.90 Aligned_cols=93 Identities=11% Similarity=-0.015 Sum_probs=60.8
Q ss_pred HHHHHHHHcCCceeehHhHHHHHHHhccCCCCccceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEecCCC
Q 022088 12 PLLTWLIYMGLLKISMASSSIEFVERGHQSSWIRSEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDY 91 (303)
Q Consensus 12 ~lv~~Al~~Gi~~~DtA~~y~~~~~~~~~~~~r~~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~ 91 (303)
.+++.|.+.|+.-+-.-+.|+..+....... ++-|+|=++.+.+..+.+.-...+++.++ .|-|-||+++==. ..
T Consensus 78 ~lc~eA~~~g~aaVCV~P~~V~~a~~~L~~s---~V~V~tVigFP~G~~~~~~Kv~Ea~~Ai~-~GAdEIDmVINig-~l 152 (288)
T 3oa3_A 78 VLCAEAKEYGFATVCVRPDYVSRAVQYLQGT---QVGVTCVIGFHEGTYSTDQKVSEAKRAMQ-NGASELDMVMNYP-WL 152 (288)
T ss_dssp HHHHHHHHHTCSEEEECGGGHHHHHHHTTTS---SCEEEEEESTTTSCSCHHHHHHHHHHHHH-TTCSEEEEECCHH-HH
T ss_pred HHHHHHHhcCCcEEEECHHHHHHHHHHcCCC---CCeEEEEeCCCCCCCcHHHHHHHHHHHHH-cCCCEEEEEeehh-hh
Confidence 5788999999998888888887654433211 57777778776655566666667777776 6999999884211 11
Q ss_pred CCCcHHHHHHHHHHHHHc
Q 022088 92 SNPGYLDALNHLTDLKEE 109 (303)
Q Consensus 92 ~~~~~~~~~~al~~l~~~ 109 (303)
...+++.+.+.+..+++.
T Consensus 153 k~g~~~~v~~eI~~V~~a 170 (288)
T 3oa3_A 153 SEKRYTDVFQDIRAVRLA 170 (288)
T ss_dssp HTTCHHHHHHHHHHHHHH
T ss_pred cCCcHHHHHHHHHHHHHH
Confidence 112255666666666554
No 112
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=34.81 E-value=2.2e+02 Score=24.58 Aligned_cols=107 Identities=12% Similarity=0.051 Sum_probs=55.9
Q ss_pred CCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHH--HHHHHHHHHHcCCccEEEec---CCCHHHHHHHHHc-CC
Q 022088 60 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLD--ALNHLTDLKEEGKIKTVALT---NFDTERLRIILEN-GI 133 (303)
Q Consensus 60 ~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~--~~~al~~l~~~G~ir~iGvS---~~~~~~l~~~~~~-~~ 133 (303)
++.+ -+..+-+.|.++|+++|.+...-.|......... .++.|..+++.-.++.-.+. |..++.+..+... ..
T Consensus 21 ~~~~-~k~~ia~~L~~aGv~~IEvg~~~~p~~~f~~~~~~~~~e~l~~i~~~~~~~~~~L~r~~~~~~~dv~~~~~a~~~ 99 (320)
T 3dxi_A 21 FNSK-IVDAYILAMNELPIDYLEVGYRNKPSKEYMGKFGYTPVSVLKHLRNISTKKIAIMLNEKNTTPEDLNHLLLPIIG 99 (320)
T ss_dssp CCHH-HHHHHHHHHHTTTCCEEEEEECCSCCSSCCCHHHHCCHHHHHHHHHHCCSEEEEEEEGGGCCGGGHHHHHGGGTT
T ss_pred CCHH-HHHHHHHHHHHhCCCEEEEecccCCccccccccccChHHHHHHHhhccCCeEEEEecCCCCChhhHHHHHHhhhc
Confidence 3444 4455566889999999999887655332110000 13444555444456665553 2233445544332 11
Q ss_pred CeeeecccccccccChhhhHHHHHHHhCCeEEee
Q 022088 134 PVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITY 167 (303)
Q Consensus 134 ~~~~~q~~~n~l~~~~~~~~~~~~~~~gi~via~ 167 (303)
.++.+.+..++-+-..-.+.+++++++|+.+...
T Consensus 100 Gvd~~ri~~~~~nle~~~~~v~~ak~~G~~v~~~ 133 (320)
T 3dxi_A 100 LVDMIRIAIDPQNIDRAIVLAKAIKTMGFEVGFN 133 (320)
T ss_dssp TCSEEEEEECGGGHHHHHHHHHHHHTTTCEEEEE
T ss_pred CCCEEEEEecHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 2333333333322122346788899999887654
No 113
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=34.30 E-value=76 Score=21.36 Aligned_cols=57 Identities=12% Similarity=0.121 Sum_probs=37.9
Q ss_pred HHHHHHcCCccEEEecCCCHHHHHHHHHcC-CCeeeecccccccccChhhhHHHHHHHhCCeEEeec
Q 022088 103 LTDLKEEGKIKTVALTNFDTERLRIILENG-IPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYG 168 (303)
Q Consensus 103 l~~l~~~G~ir~iGvS~~~~~~l~~~~~~~-~~~~~~q~~~n~l~~~~~~~~~~~~~~~gi~via~s 168 (303)
++++++.|++.. +..+...+++.+ ..+.++--..++ ..-..+..+|+++||+++-+.
T Consensus 3 ~~~~~kagk~~~------G~~~v~kai~~gkaklViiA~D~~~---~~~~~i~~lc~~~~Ip~~~v~ 60 (82)
T 3v7e_A 3 YDKVSQAKSIII------GTKQTVKALKRGSVKEVVVAKDADP---ILTSSVVSLAEDQGISVSMVE 60 (82)
T ss_dssp HHHHHHCSEEEE------SHHHHHHHHTTTCEEEEEEETTSCH---HHHHHHHHHHHHHTCCEEEES
T ss_pred HHHHHHcCCeeE------cHHHHHHHHHcCCeeEEEEeCCCCH---HHHHHHHHHHHHcCCCEEEEC
Confidence 577888888654 556777777653 345555444444 233568889999999998654
No 114
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=33.74 E-value=77 Score=28.37 Aligned_cols=99 Identities=6% Similarity=0.031 Sum_probs=64.3
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEEe-cCCCHHHHHHHHHcCCCeee
Q 022088 59 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVAL-TNFDTERLRIILENGIPVVS 137 (303)
Q Consensus 59 ~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGv-S~~~~~~l~~~~~~~~~~~~ 137 (303)
.++++...+-++. |+.++ +.++..|-+. +.++.+.++++.-.|-=.+- +.++.+.++++++. ...++
T Consensus 228 ~~~~~~ai~~~~~-l~~~~-----i~~iE~P~~~-----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~-~~~d~ 295 (410)
T 2gl5_A 228 LLGTNSAIQFAKA-IEKYR-----IFLYEEPIHP-----LNSDNMQKVSRSTTIPIATGERSYTRWGYRELLEK-QSIAV 295 (410)
T ss_dssp CSCHHHHHHHHHH-HGGGC-----EEEEECSSCS-----SCHHHHHHHHHHCSSCEEECTTCCTTHHHHHHHHT-TCCSE
T ss_pred CCCHHHHHHHHHH-HHhcC-----CCeEECCCCh-----hhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHc-CCCCE
Confidence 5577766665544 66654 4556666432 22566777777655554443 34578899998886 35788
Q ss_pred eccccccccc-ChhhhHHHHHHHhCCeEEeecc
Q 022088 138 NQVQHSVVDM-RPQQKMAELCQLTGVKLITYGT 169 (303)
Q Consensus 138 ~q~~~n~l~~-~~~~~~~~~~~~~gi~via~sp 169 (303)
+|+..+-.-- ....++..+|+++|+.++..+.
T Consensus 296 v~ik~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 328 (410)
T 2gl5_A 296 AQPDLCLCGGITEGKKICDYANIYDTTVQVHVC 328 (410)
T ss_dssp ECCCTTTTTHHHHHHHHHHHHHTTTCEECCCCC
T ss_pred EecCccccCCHHHHHHHHHHHHHcCCeEeecCC
Confidence 8887654311 1134789999999999988766
No 115
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=33.61 E-value=2.2e+02 Score=24.01 Aligned_cols=102 Identities=11% Similarity=-0.001 Sum_probs=65.2
Q ss_pred CHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHc--CCCeeee
Q 022088 61 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN--GIPVVSN 138 (303)
Q Consensus 61 ~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~--~~~~~~~ 138 (303)
+.+.+.+..++.. .-|-|.||+-.--. .....+.+...++.+++.-. --+.|-++.++.++++++. |..+ +|
T Consensus 32 ~~~~a~~~a~~~v-~~GAdiIDIg~~s~---~~eE~~rv~~vi~~l~~~~~-~pisIDT~~~~v~~aal~a~~Ga~i-IN 105 (271)
T 2yci_X 32 DPRPIQEWARRQA-EKGAHYLDVNTGPT---ADDPVRVMEWLVKTIQEVVD-LPCCLDSTNPDAIEAGLKVHRGHAM-IN 105 (271)
T ss_dssp CCHHHHHHHHHHH-HTTCSEEEEECCSC---SSCHHHHHHHHHHHHHHHCC-CCEEEECSCHHHHHHHHHHCCSCCE-EE
T ss_pred CHHHHHHHHHHHH-HCCCCEEEEcCCcC---chhHHHHHHHHHHHHHHhCC-CeEEEeCCCHHHHHHHHHhCCCCCE-EE
Confidence 4455666555544 68888888865442 22225566667777776522 2467788999999999987 5332 21
Q ss_pred cccccccccChh--hhHHHHHHHhCCeEEeecccccc
Q 022088 139 QVQHSVVDMRPQ--QKMAELCQLTGVKLITYGTVMGG 173 (303)
Q Consensus 139 q~~~n~l~~~~~--~~~~~~~~~~gi~via~spl~~G 173 (303)
- .|.. .+ .++++.+++.|..++.+..-..|
T Consensus 106 d--vs~~---~d~~~~~~~~~a~~~~~vv~m~~d~~G 137 (271)
T 2yci_X 106 S--TSAD---QWKMDIFFPMAKKYEAAIIGLTMNEKG 137 (271)
T ss_dssp E--ECSC---HHHHHHHHHHHHHHTCEEEEESCBTTB
T ss_pred E--CCCC---ccccHHHHHHHHHcCCCEEEEecCCCC
Confidence 1 1222 13 57899999999999988653344
No 116
>3ta6_A Triosephosphate isomerase; HET: FLC; 1.41A {Mycobacterium tuberculosis} SCOP: c.1.1.0 PDB: 3tao_A* 3gvg_A
Probab=33.34 E-value=71 Score=27.10 Aligned_cols=46 Identities=28% Similarity=0.224 Sum_probs=27.5
Q ss_pred hCCCHHHHHHHHHhhCCCCceeeeccCCCCHhHHHHhHhhhcC-CCC
Q 022088 228 HGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFML-SLD 273 (303)
Q Consensus 228 ~g~s~~qlal~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~~~-~L~ 273 (303)
||-|...--.+=++++|.|+..++|-.|.+++...+.+++... ||+
T Consensus 215 YGGSV~~~N~~el~~~~diDG~LVGgASL~~~~F~~Ii~~~~~~~~~ 261 (267)
T 3ta6_A 215 YGGSVNAKNVGDIVAQDDVDGGLVGGASLDGEHFATLAAIAAGGPLP 261 (267)
T ss_dssp ECSCCCTTTHHHHHTSTTCCEEEECGGGGSHHHHHHHHHHHHC----
T ss_pred EcCCcCHhHHHHHhcCCCCCEEEechHhcCHHHHHHHHHHHhcCCCC
Confidence 3434333334457778888888888886666666666665544 554
No 117
>3s83_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, signaling protein; HET: MSE; 1.34A {Caulobacter crescentus} PDB: 3u2e_A
Probab=33.30 E-value=81 Score=25.92 Aligned_cols=115 Identities=14% Similarity=0.117 Sum_probs=67.8
Q ss_pred ceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCcccEE-EEecCCCCCCcHHHHHHHHHHHHHcCCccEEEecCCCH--
Q 022088 46 SEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDML-QFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDT-- 122 (303)
Q Consensus 46 ~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iDl~-~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS~~~~-- 122 (303)
++.|+-.+.+. ......+...+.+.|++.+.+.-.+. -+...... .+...+...++.|++.|- .+.+..|+.
T Consensus 90 ~~~l~iNls~~--~l~~~~~~~~l~~~l~~~~~~~~~l~lEitE~~~~-~~~~~~~~~l~~l~~~G~--~ialDdfG~g~ 164 (259)
T 3s83_A 90 NLTVSVNLSTG--EIDRPGLVADVAETLRVNRLPRGALKLEVTESDIM-RDPERAAVILKTLRDAGA--GLALDDFGTGF 164 (259)
T ss_dssp CCEEEEECCTT--GGGSTTHHHHHHHHHHHTTCCTTSEEEEEEHHHHH-HCHHHHHHHHHHHHHHTC--EEEEECC---C
T ss_pred ceEEEEEcCHH--HhCCcHHHHHHHHHHHHcCCCcceEEEEECCchhh-hCHHHHHHHHHHHHHCCC--EEEEECCCCCc
Confidence 35566666654 22334567788888888887543332 12211111 124567788999999998 555555543
Q ss_pred HHHHHHHHcCCCeeeecccccccccC--------hhhhHHHHHHHhCCeEEee
Q 022088 123 ERLRIILENGIPVVSNQVQHSVVDMR--------PQQKMAELCQLTGVKLITY 167 (303)
Q Consensus 123 ~~l~~~~~~~~~~~~~q~~~n~l~~~--------~~~~~~~~~~~~gi~via~ 167 (303)
..+..+.. .+++.+-+.-+++..- .-+.++..|++.|+.+++=
T Consensus 165 ssl~~L~~--l~~d~iKiD~~~v~~~~~~~~~~~~~~~i~~~a~~~g~~viae 215 (259)
T 3s83_A 165 SSLSYLTR--LPFDTLKIDRYFVRTMGNNAGSAKIVRSVVKLGQDLDLEVVAE 215 (259)
T ss_dssp HHHHHHHH--SCCCEEEECHHHHHHTTTCHHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred hhHHHHHh--CCCCEEEECHHHHhhhhcCchHHHHHHHHHHHHHHCCCeEEEE
Confidence 33444433 4567666665554321 1246889999999998864
No 118
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=33.14 E-value=52 Score=29.41 Aligned_cols=95 Identities=11% Similarity=-0.054 Sum_probs=59.4
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHc-----CCccEEEecCCCHHHHHHHHHcCC
Q 022088 59 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEE-----GKIKTVALTNFDTERLRIILENGI 133 (303)
Q Consensus 59 ~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~-----G~ir~iGvS~~~~~~l~~~~~~~~ 133 (303)
.++.+...+-++. |+.+ ++.++..|-+ . .++.+.++++. -.|-=.+--.++++.++++++. .
T Consensus 211 ~~~~~~ai~~~~~-l~~~-----~i~~iE~P~~--~----d~~~~~~l~~~l~~~g~~iPIa~dE~~~~~~~~~~i~~-~ 277 (392)
T 3p3b_A 211 AYNLNLTKEVLAA-LSDV-----NLYWLEEAFH--E----DEALYEDLKEWLGQRGQNVLIADGEGLASPHLIEWATR-G 277 (392)
T ss_dssp CCCHHHHHHHHHH-TTTS-----CEEEEECSSS--C----CHHHHHHHHHHHHHHTCCCEEEECCSSCCTTHHHHHHT-T
T ss_pred CCCHHHHHHHHHH-HHhc-----CCCEEecCCc--c----cHHHHHHHHHhhccCCCCccEEecCCCCHHHHHHHHHc-C
Confidence 4576665554444 5544 5566777654 2 23456666665 3343222225677888888876 3
Q ss_pred CeeeecccccccccCh-hhhHHHHHHHhCCeEEee
Q 022088 134 PVVSNQVQHSVVDMRP-QQKMAELCQLTGVKLITY 167 (303)
Q Consensus 134 ~~~~~q~~~n~l~~~~-~~~~~~~~~~~gi~via~ 167 (303)
..+++|+..+-. --. ..++...|+++|+.++..
T Consensus 278 ~~d~v~ik~~~~-Git~~~~i~~~A~~~gi~~~~h 311 (392)
T 3p3b_A 278 RVDVLQYDIIWP-GFTHWMELGEKLDAHGLRSAPH 311 (392)
T ss_dssp SCCEECCBTTTB-CHHHHHHHHHHHHHTTCEECCB
T ss_pred CCCEEEeCcccc-CHHHHHHHHHHHHHcCCEEEec
Confidence 578888877654 211 247899999999998876
No 119
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=32.97 E-value=1.6e+02 Score=26.05 Aligned_cols=136 Identities=13% Similarity=0.040 Sum_probs=78.2
Q ss_pred HHHHHHHcCCceeehH--h---HH-HH--HHHhccCCCCccceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCcccEE
Q 022088 13 LLTWLIYMGLLKISMA--S---SS-IE--FVERGHQSSWIRSEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDML 84 (303)
Q Consensus 13 lv~~Al~~Gi~~~DtA--~---~y-~~--~~~~~~~~~~r~~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iDl~ 84 (303)
..+.+.+.|++.|..- . .. .. +..++..+. ++-|.-... ..++.+...+-++. |+..| .|+.
T Consensus 152 ~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~a~G~---~~~l~vDan---~~~~~~~a~~~~~~-l~~~g---~~i~ 221 (389)
T 2oz8_A 152 LFSHAASIGYSAFKIKVGHRDFDRDLRRLELLKTCVPA---GSKVMIDPN---EAWTSKEALTKLVA-IREAG---HDLL 221 (389)
T ss_dssp HHHHHHHTTCCEEEEECCCSSHHHHHHHHHHHHTTSCT---TCEEEEECT---TCBCHHHHHHHHHH-HHHTT---CCCS
T ss_pred HHHHHHHhCCCEEEEccCCCCHHHHHHHHHHHHHhhCC---CCeEEEECC---CCCCHHHHHHHHHH-HHhcC---CCce
Confidence 4456678898887641 1 11 11 122222211 344444432 25577776666654 77722 1333
Q ss_pred EEecCCCCCCcHHHHHHHHHHHHHcC-CccEEEecCCCHHHHHHHHHcCCCeeeecccccccccChhhhHHHHHHHhCCe
Q 022088 85 QFHWWDYSNPGYLDALNHLTDLKEEG-KIKTVALTNFDTERLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVK 163 (303)
Q Consensus 85 ~lH~~~~~~~~~~~~~~al~~l~~~G-~ir~iGvS~~~~~~l~~~~~~~~~~~~~q~~~n~l~~~~~~~~~~~~~~~gi~ 163 (303)
++..|-+. +.++.+.++++.- .|-=.+--+.+.+.++++++. ...+++|+. .=+ ....++...|+++|+.
T Consensus 222 ~iEqP~~~-----~~~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~i~~-~~~d~v~ik-GGi--t~a~~i~~~A~~~gi~ 292 (389)
T 2oz8_A 222 WVEDPILR-----HDHDGLRTLRHAVTWTQINSGEYLDLQGKRLLLEA-HAADILNVH-GQV--TDVMRIGWLAAELGIP 292 (389)
T ss_dssp EEESCBCT-----TCHHHHHHHHHHCCSSEEEECTTCCHHHHHHHHHT-TCCSEEEEC-SCH--HHHHHHHHHHHHHTCC
T ss_pred EEeCCCCC-----cCHHHHHHHHhhCCCCCEEeCCCCCHHHHHHHHHc-CCCCEEEEC-cCH--HHHHHHHHHHHHcCCe
Confidence 55665322 2356777888764 554443333388999999886 357788887 111 1234789999999999
Q ss_pred EEee
Q 022088 164 LITY 167 (303)
Q Consensus 164 via~ 167 (303)
++..
T Consensus 293 ~~~~ 296 (389)
T 2oz8_A 293 ISIG 296 (389)
T ss_dssp EEEC
T ss_pred Eeec
Confidence 9988
No 120
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=32.79 E-value=2.2e+02 Score=24.75 Aligned_cols=84 Identities=10% Similarity=0.071 Sum_probs=56.5
Q ss_pred ccEEEEecCCCCCCcHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHHHH
Q 022088 81 LDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQ 158 (303)
Q Consensus 81 iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~~q~~~n~l~~-~~~~~~~~~~~ 158 (303)
.++.++..|-+.. .++.+.+++++-.|- ..|=+.++.++++++++. ..++++|+..+-.-- ....++...|+
T Consensus 209 ~~i~~iEqP~~~~-----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~-~~~d~v~~k~~~~GGit~~~~i~~~A~ 282 (354)
T 3jva_A 209 YQIELVEQPVKRR-----DLEGLKYVTSQVNTTIMADESCFDAQDALELVKK-GTVDVINIKLMKCGGIHEALKINQICE 282 (354)
T ss_dssp SCEEEEECCSCTT-----CHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHH-TCCSEEEECHHHHTSHHHHHHHHHHHH
T ss_pred cCCCEEECCCChh-----hHHHHHHHHHhCCCCEEEcCCcCCHHHHHHHHHc-CCCCEEEECchhcCCHHHHHHHHHHHH
Confidence 4667777764322 245677777764443 444566788999998876 347777777654311 11357899999
Q ss_pred HhCCeEEeeccc
Q 022088 159 LTGVKLITYGTV 170 (303)
Q Consensus 159 ~~gi~via~spl 170 (303)
++|+.++..+.+
T Consensus 283 ~~gi~~~~~~~~ 294 (354)
T 3jva_A 283 TAGIECMIGCMA 294 (354)
T ss_dssp HTTCEEEECCCT
T ss_pred HcCCeEEecCCC
Confidence 999999987777
No 121
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=32.71 E-value=1.4e+02 Score=26.83 Aligned_cols=88 Identities=8% Similarity=0.015 Sum_probs=56.1
Q ss_pred ccEEEEecCCCCCCcHHHHHHHHHHHHHcCCc-cEEEecCCCHHHHHHHHHcCCCeeeecccccccccChhhhHHHHHHH
Q 022088 81 LDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQL 159 (303)
Q Consensus 81 iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~~q~~~n~l~~~~~~~~~~~~~~ 159 (303)
.++.++-.|-+.. -++.+.+|+++-.| -+.|=|.++.+++.++++. --++++|+...----.....+...|+.
T Consensus 258 ~~l~~iEqP~~~~-----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~-~a~div~~d~~~GGit~~~kia~~A~~ 331 (412)
T 4h1z_A 258 HGLWFAEAPVRTE-----DIDGLARVAASVSTAIAVGEEWRTVHDMVPRVAR-RALAIVQPEMGHKGITQFMRIGAYAHV 331 (412)
T ss_dssp GCEEEEECCSCTT-----CHHHHHHHHHHCSSEEEECTTCCSHHHHHHHHHT-TCCSEECCCHHHHHHHHHHHHHHHHHH
T ss_pred cccceecCCCCcc-----chHHHHHHHhhcCCccccCCcccchHhHHHHHHc-CCCCEEEecCCCCChHHHHHHHHHHHH
Confidence 3455666553322 24566777766443 3456677888999888886 346777776431000113468889999
Q ss_pred hCCeEEeeccccccc
Q 022088 160 TGVKLITYGTVMGGL 174 (303)
Q Consensus 160 ~gi~via~spl~~G~ 174 (303)
+|+.++..++++.|+
T Consensus 332 ~gi~v~~h~~~~~~i 346 (412)
T 4h1z_A 332 HHIKVIPHATIGAGI 346 (412)
T ss_dssp TTCEECCCCCSSCSH
T ss_pred CCCcEEecCCcchHH
Confidence 999999888776653
No 122
>3sma_A FRBF; N-acetyl transferase, acetyl COA binding, transferase; HET: ACO; 2.00A {Streptomyces rubellomurinus}
Probab=32.66 E-value=72 Score=27.38 Aligned_cols=54 Identities=17% Similarity=0.115 Sum_probs=39.7
Q ss_pred HHHHHHHHHhhcCCCcccEEEEecCCCCCC----cHHHHHHHHHHHH-HcCCccEEEec
Q 022088 65 VRESIDVSRRRMDVPCLDMLQFHWWDYSNP----GYLDALNHLTDLK-EEGKIKTVALT 118 (303)
Q Consensus 65 i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~----~~~~~~~al~~l~-~~G~ir~iGvS 118 (303)
-++++.+.|+.||+..=|.+++|..-.... .-+.++++|.+++ ++|-+-.-..|
T Consensus 23 T~~~L~~~L~~LGI~~Gd~llVHsSL~~lG~v~Gga~~vi~AL~~~vg~~GTLvmPt~t 81 (286)
T 3sma_A 23 TRDRLASDLAALGVRPGGVLLVHASLSALGWVCGGAQAVVLALQDAVGKEGTLVMPTFS 81 (286)
T ss_dssp CHHHHHHHHHHHTCCTTCEEEEEECSTTSCEETTHHHHHHHHHHHHHCTTCEEEEECCC
T ss_pred CHHHHHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhcCCCEEEEeccC
Confidence 356788889999999999999998633322 1357888998888 57876665544
No 123
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=32.48 E-value=40 Score=29.74 Aligned_cols=99 Identities=12% Similarity=0.020 Sum_probs=60.0
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHHcCCCeee
Q 022088 59 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVS 137 (303)
Q Consensus 59 ~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~ 137 (303)
.++.+. .+-+ +.|+.+++++ +..|-+. +.++.+.+++++-.|. ..|=+.++.+.++++++. ...++
T Consensus 192 ~~~~~~-~~~~-~~l~~~~i~~-----iEqP~~~-----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~-~~~d~ 258 (369)
T 2zc8_A 192 AYSLAN-LAQL-KRLDELRLDY-----IEQPLAY-----DDLLDHAKLQRELSTPICLDESLTGAEKARKAIEL-GAGRV 258 (369)
T ss_dssp CCCGGG-HHHH-HGGGGGCCSC-----EECCSCT-----TCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHH-TCCSE
T ss_pred CCCHHH-HHHH-HHHHhCCCcE-----EECCCCc-----ccHHHHHHHHhhCCCCEEEcCccCCHHHHHHHHHh-CCCCE
Confidence 446666 4433 3477776655 4455322 2245566777654443 344455788999999886 34777
Q ss_pred eccccccccc-ChhhhHHHHHHHhCCeEEeeccc
Q 022088 138 NQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTV 170 (303)
Q Consensus 138 ~q~~~n~l~~-~~~~~~~~~~~~~gi~via~spl 170 (303)
+|+..+-.-- ....++...|+++|+.++.-+-+
T Consensus 259 v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~ 292 (369)
T 2zc8_A 259 FNVKPARLGGHGESLRVHALAESAGIPLWMGGML 292 (369)
T ss_dssp EEECHHHHTSHHHHHHHHHHHHHTTCCEEECCCC
T ss_pred EEEchhhhCCHHHHHHHHHHHHHcCCcEEecCcc
Confidence 7776554311 11357899999999996554433
No 124
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=32.39 E-value=72 Score=25.76 Aligned_cols=73 Identities=7% Similarity=-0.028 Sum_probs=45.5
Q ss_pred CHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEEec-CCCHHHHHHHHHcCCCeeeec
Q 022088 61 TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALT-NFDTERLRIILENGIPVVSNQ 139 (303)
Q Consensus 61 ~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS-~~~~~~l~~~~~~~~~~~~~q 139 (303)
+++.++... .+|.||+=+.+. .+.+-.-. .+....|.+.. ...+..+||- |.+++.+.++... ..++++|
T Consensus 11 ~~eda~~a~-----~~GaD~iGfif~-~~SpR~V~-~~~a~~i~~~~-~~~~~~VgVfvn~~~~~i~~~~~~-~~ld~vQ 81 (205)
T 1nsj_A 11 NLEDALFSV-----ESGADAVGFVFY-PKSKRYIS-PEDARRISVEL-PPFVFRVGVFVNEEPEKILDVASY-VQLNAVQ 81 (205)
T ss_dssp SHHHHHHHH-----HHTCSEEEEECC-TTCTTBCC-HHHHHHHHHHS-CSSSEEEEEESSCCHHHHHHHHHH-HTCSEEE
T ss_pred cHHHHHHHH-----HcCCCEEEEEec-CCCCCcCC-HHHHHHHHHhC-CCCCCEEEEEeCCCHHHHHHHHHh-hCCCEEE
Confidence 445555443 689999888843 22222222 23333333222 2468999986 6788888888876 5789999
Q ss_pred ccc
Q 022088 140 VQH 142 (303)
Q Consensus 140 ~~~ 142 (303)
++-
T Consensus 82 LHG 84 (205)
T 1nsj_A 82 LHG 84 (205)
T ss_dssp ECS
T ss_pred ECC
Confidence 974
No 125
>3l9c_A 3-dehydroquinate dehydratase; AROD, amino-acid biosynthesis, aromatic amino acid biosynthe schiff base, lyase; 1.60A {Streptococcus mutans}
Probab=32.21 E-value=2.2e+02 Score=23.77 Aligned_cols=26 Identities=8% Similarity=-0.046 Sum_probs=19.3
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEE
Q 022088 59 KMTSSIVRESIDVSRRRMDVPCLDML 84 (303)
Q Consensus 59 ~~~~~~i~~sve~SL~~Lg~d~iDl~ 84 (303)
..+.+.-.+-++..++.++.||||+=
T Consensus 105 ~~~~~~y~~ll~~~~~~~~~dyIDVE 130 (259)
T 3l9c_A 105 SLSNEDYLAIIRDIAALYQPDYIDFE 130 (259)
T ss_dssp CCCHHHHHHHHHHHHHHHCCSEEEEE
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 45666666667777777999999984
No 126
>3lqv_P Splicing factor 3B subunit 1; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} PDB: 2f9d_P 2f9j_P
Probab=32.13 E-value=51 Score=19.05 Aligned_cols=24 Identities=13% Similarity=0.225 Sum_probs=16.0
Q ss_pred CHhHHHH-----hHhhhcCCCCHHHHHHH
Q 022088 257 LAEHIQD-----TNAIFMLSLDEDDVNSI 280 (303)
Q Consensus 257 ~~~~l~e-----n~~a~~~~L~~e~~~~i 280 (303)
+|+++.. -+.....+||+||+..+
T Consensus 3 tpe~~~~~~~~~ei~~RNrpltDEeLD~m 31 (39)
T 3lqv_P 3 TPEQLQAWRWEREIDERNRPLSDEELDAM 31 (39)
T ss_dssp CHHHHHHHHHHHHHHHTTCCCCHHHHHHT
T ss_pred CHHHHHHHHhhccchhhcCCCCHHHHHHh
Confidence 4555544 45556679999997654
No 127
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=32.10 E-value=1.2e+02 Score=27.49 Aligned_cols=97 Identities=9% Similarity=0.021 Sum_probs=61.9
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHc-C-CccEEEecCCCHHHHHHHHHcCCCee
Q 022088 59 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEE-G-KIKTVALTNFDTERLRIILENGIPVV 136 (303)
Q Consensus 59 ~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~-G-~ir~iGvS~~~~~~l~~~~~~~~~~~ 136 (303)
.++.+...+-++. |+.+++++ +..|-+. +.++.+.++++. + .--..|=+.++++.++++++. ...+
T Consensus 252 ~~~~~~a~~~~~~-l~~~~i~~-----iEqP~~~-----~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~-~~~d 319 (441)
T 2hxt_A 252 RWDVGPAIDWMRQ-LAEFDIAW-----IEEPTSP-----DDVLGHAAIRQGITPVPVSTGEHTQNRVVFKQLLQA-GAVD 319 (441)
T ss_dssp CCCHHHHHHHHHT-TGGGCCSC-----EECCSCT-----TCHHHHHHHHHHHTTSCEEECTTCCSHHHHHHHHHH-TCCS
T ss_pred CCCHHHHHHHHHH-HHhcCCCe-----eeCCCCH-----HHHHHHHHHHhhCCCCCEEEeCCcCCHHHHHHHHHc-CCCC
Confidence 5577776665555 77777664 4555322 234566677765 2 334445566789999999887 3578
Q ss_pred eeccccccccc-ChhhhHHHHHHHhCCeEEee
Q 022088 137 SNQVQHSVVDM-RPQQKMAELCQLTGVKLITY 167 (303)
Q Consensus 137 ~~q~~~n~l~~-~~~~~~~~~~~~~gi~via~ 167 (303)
++|+..+-.-- .....+...|+++|+.+..+
T Consensus 320 ~v~ik~~~~GGite~~~ia~~A~~~g~~~~~h 351 (441)
T 2hxt_A 320 LIQIDAARVGGVNENLAILLLAAKFGVRVFPH 351 (441)
T ss_dssp EECCCTTTSSHHHHHHHHHHHHHHTTCEECCC
T ss_pred EEEeCcceeCCHHHHHHHHHHHHHcCCeEEEe
Confidence 88887654311 11346889999999998543
No 128
>3kz3_A Repressor protein CI; five helix bundle, DNA-binding, transcription, transcription regulation; 1.64A {Enterobacteria phage lambda}
Probab=31.91 E-value=54 Score=21.41 Aligned_cols=53 Identities=21% Similarity=0.130 Sum_probs=29.7
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHhhCCCCceeeeccCCCCHhHHHHhHhhhcC
Q 022088 218 LQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFML 270 (303)
Q Consensus 218 ~~~l~~ia~~~g~s~~qlal~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~~~ 270 (303)
.+.++.+.++.|+|..++|-+.-+++..+.-..-|-+..+.+.+...+++++.
T Consensus 14 ~~~l~~~r~~~gltq~~lA~~~gvs~~~is~~e~g~~~~~~~~~~~ia~~l~v 66 (80)
T 3kz3_A 14 KAIWEKKKNELGLSYESVADKMGMGQSAVAALFNGINALNAYNAALLAKILKV 66 (80)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHTTSCHHHHHHHHTTSSCCCHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHcCCCHHHHHHHhCcCHHHHHHHHcCCCCCCHHHHHHHHHHhCC
Confidence 35666666677777777666554444434333334442245666666666654
No 129
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=31.81 E-value=65 Score=28.79 Aligned_cols=110 Identities=8% Similarity=-0.030 Sum_probs=68.4
Q ss_pred ceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEEec-CCCHHH
Q 022088 46 SEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALT-NFDTER 124 (303)
Q Consensus 46 ~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS-~~~~~~ 124 (303)
++-|.-... ..++.+...+-++. |+.++ +.++..|-+. +.++.+.++++.-.|-=.+-- .++++.
T Consensus 209 d~~l~vDan---~~~~~~~ai~~~~~-l~~~~-----i~~iE~P~~~-----~d~~~~~~l~~~~~iPIa~dE~~~~~~~ 274 (403)
T 2ox4_A 209 DVDIIVENH---GHTDLVSAIQFAKA-IEEFN-----IFFYEEINTP-----LNPRLLKEAKKKIDIPLASGERIYSRWG 274 (403)
T ss_dssp TSEEEEECT---TCSCHHHHHHHHHH-HGGGC-----EEEEECCSCT-----TSTHHHHHHHHTCCSCEEECTTCCHHHH
T ss_pred CCeEEEECC---CCCCHHHHHHHHHH-HHhhC-----CCEEeCCCCh-----hhHHHHHHHHHhCCCCEEecCCcCCHHH
Confidence 344444442 25577766665554 66655 4456665332 235667788877666544443 356788
Q ss_pred HHHHHHcCCCeeeeccccccccc-ChhhhHHHHHHHhCCeEEeeccc
Q 022088 125 LRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTV 170 (303)
Q Consensus 125 l~~~~~~~~~~~~~q~~~n~l~~-~~~~~~~~~~~~~gi~via~spl 170 (303)
++++++. -..+++|+..+-.-- ....++...|+++|+.++..+..
T Consensus 275 ~~~~i~~-~~~d~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h~~~ 320 (403)
T 2ox4_A 275 FLPFLED-RSIDVIQPDLGTCGGFTEFKKIADMAHIFEVTVQAHVAG 320 (403)
T ss_dssp HHHHHHT-TCCSEECCCHHHHTHHHHHHHHHHHHHHTTCEECCCCCS
T ss_pred HHHHHHc-CCCCEEecCccccCCHHHHHHHHHHHHHcCCEEeecCCC
Confidence 8888876 347777777654311 11357899999999999987663
No 130
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=31.75 E-value=1.5e+02 Score=26.34 Aligned_cols=87 Identities=9% Similarity=0.085 Sum_probs=57.7
Q ss_pred ccEEEEecCCCCCCcHHHHHHHHHHHHHcCCc-cEEEecCCCHHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHHHH
Q 022088 81 LDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQ 158 (303)
Q Consensus 81 iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~~q~~~n~l~~-~~~~~~~~~~~ 158 (303)
.++.++..|-+.. -++.+.++++.-.+ -+.|=|.++.++++.+++.+ ..+++|+..+-.-- .....+...|+
T Consensus 214 ~~l~~iEeP~~~~-----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-a~d~v~~k~~~~GGi~~~~~ia~~A~ 287 (379)
T 3r0u_A 214 LNVEIIEQPVKYY-----DIKAMAEITKFSNIPVVADESVFDAKDAERVIDEQ-ACNMINIKLAKTGGILEAQKIKKLAD 287 (379)
T ss_dssp CCEEEEECCSCTT-----CHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHTT-CCSEEEECHHHHTSHHHHHHHHHHHH
T ss_pred CCcEEEECCCCcc-----cHHHHHHHHhcCCCCEEeCCccCCHHHHHHHHHcC-CCCEEEECccccCCHHHHHHHHHHHH
Confidence 4677777764332 24566677765333 45566778889998888863 46777776654310 11356899999
Q ss_pred HhCCeEEeecccccc
Q 022088 159 LTGVKLITYGTVMGG 173 (303)
Q Consensus 159 ~~gi~via~spl~~G 173 (303)
++|+.++..+.+.++
T Consensus 288 ~~gi~~~~~~~~es~ 302 (379)
T 3r0u_A 288 SAGISCMVGCMMESP 302 (379)
T ss_dssp HTTCEEEECCCSCCH
T ss_pred HcCCEEEEeCCCccH
Confidence 999999987766554
No 131
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=31.46 E-value=1.2e+02 Score=24.95 Aligned_cols=92 Identities=10% Similarity=0.031 Sum_probs=60.2
Q ss_pred HHHHHHHHcCCceeehHhHHHHHHHhccCCCCccceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEecCCC
Q 022088 12 PLLTWLIYMGLLKISMASSSIEFVERGHQSSWIRSEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDY 91 (303)
Q Consensus 12 ~lv~~Al~~Gi~~~DtA~~y~~~~~~~~~~~~r~~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~ 91 (303)
.+++.|.+.|+.-+-.-+.|+..+. .... .++-|+|=++.+.+..+.+.-...+++.++ .|-|-||++.==.. .
T Consensus 33 ~lc~eA~~~~~~aVcV~p~~v~~a~-~l~~---~~v~v~tVigFP~G~~~~~~K~~E~~~Ai~-~GAdEIDmVinig~-l 106 (231)
T 3ndo_A 33 ALVDEAADLGVFAVCVSPPLVSVAA-GVAP---SGLAIAAVAGFPSGKHVPGIKATEAELAVA-AGATEIDMVIDVGA-A 106 (231)
T ss_dssp HHHHHHHHHTCSEEEECGGGHHHHH-HHCC---TTCEEEEEESTTTCCSCHHHHHHHHHHHHH-TTCSEEEEECCHHH-H
T ss_pred HHHHHHHHhCCcEEEECHHHHHHHH-HhcC---CCCeEEEEecCCCCCCcHHHHHHHHHHHHH-cCCCEEEEEeehHh-h
Confidence 5788999999988888888877554 2211 167788888777666566666667777777 59999998842111 1
Q ss_pred CCCcHHHHHHHHHHHHHc
Q 022088 92 SNPGYLDALNHLTDLKEE 109 (303)
Q Consensus 92 ~~~~~~~~~~al~~l~~~ 109 (303)
...+++.+.+.+..+++.
T Consensus 107 k~g~~~~v~~ei~~v~~a 124 (231)
T 3ndo_A 107 LAGDLDAVSADITAVRKA 124 (231)
T ss_dssp HTTCHHHHHHHHHHHHHH
T ss_pred hcccHHHHHHHHHHHHHH
Confidence 112245566666655544
No 132
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=31.33 E-value=37 Score=29.75 Aligned_cols=70 Identities=11% Similarity=0.088 Sum_probs=48.9
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHhhCCCCceeeeccCCCCHhHHHHhHhhhcC--------C--CCHHHHHHHHHHHhcCC
Q 022088 219 QTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFML--------S--LDEDDVNSIQEVTKKGK 288 (303)
Q Consensus 219 ~~l~~ia~~~g~s~~qlal~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~~~--------~--L~~e~~~~i~~~~~~~~ 288 (303)
+..+++++++|+...---++=+++.+.++.|++.+. +..|.+-.++|++. | ++.+|.++|.++.++..
T Consensus 68 ~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~IatP--~~~H~~~a~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g 145 (393)
T 4fb5_A 68 GLAEARAGEFGFEKATADWRALIADPEVDVVSVTTP--NQFHAEMAIAALEAGKHVWCEKPMAPAYADAERMLATAERSG 145 (393)
T ss_dssp TTHHHHHHHHTCSEEESCHHHHHHCTTCCEEEECSC--GGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHhCCCeecCCHHHHhcCCCCcEEEECCC--hHHHHHHHHHHHhcCCeEEEccCCcccHHHHHHhhhhHHhcC
Confidence 456677888887532222444677888999888888 77787777766632 4 67789988888887655
Q ss_pred CC
Q 022088 289 DL 290 (303)
Q Consensus 289 ~~ 290 (303)
..
T Consensus 146 ~~ 147 (393)
T 4fb5_A 146 KV 147 (393)
T ss_dssp SC
T ss_pred Cc
Confidence 43
No 133
>4hv0_A AVTR; ribbon-helix-helix, DNA, transcription, viral protein; 2.60A {Acidianus filamentous virus 6}
Probab=30.93 E-value=71 Score=22.69 Aligned_cols=26 Identities=27% Similarity=0.439 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHh
Q 022088 216 VLLQTLKRIASKHGVSIPVVAVRYIL 241 (303)
Q Consensus 216 ~~~~~l~~ia~~~g~s~~qlal~~~l 241 (303)
..++.|+++|++.|+|+++++=+.+.
T Consensus 8 slY~~LkelAe~EGvSvSav~RkLL~ 33 (106)
T 4hv0_A 8 EVYEFLKKKAKEEGTSVPAVIRKILK 33 (106)
T ss_dssp HHHHHHHHHHHHTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 34689999999999999998866654
No 134
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=30.83 E-value=76 Score=28.34 Aligned_cols=107 Identities=8% Similarity=0.034 Sum_probs=66.3
Q ss_pred ceEEEccccCCCCCC--CHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHH-cCCccEEEe-cCCC
Q 022088 46 SEGDLTKWVPPPVKM--TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKE-EGKIKTVAL-TNFD 121 (303)
Q Consensus 46 ~~~I~tK~~~~~~~~--~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~-~G~ir~iGv-S~~~ 121 (303)
++-|.-+.. ..+ +.+...+-++. |+.+++++ +..|-.. +.++.+.++++ .-.|-=.+- +.++
T Consensus 193 d~~l~vDan---~~~~~~~~~a~~~~~~-l~~~~i~~-----iEqP~~~-----~d~~~~~~l~~~~~~iPI~~dE~~~~ 258 (401)
T 2hzg_A 193 DGDLMVDVG---QIFGEDVEAAAARLPT-LDAAGVLW-----LEEPFDA-----GALAAHAALAGRGARVRIAGGEAAHN 258 (401)
T ss_dssp SSEEEEECT---TTTTTCHHHHHTTHHH-HHHTTCSE-----EECCSCT-----TCHHHHHHHHTTCCSSEEEECTTCSS
T ss_pred CCeEEEECC---CCCCCCHHHHHHHHHH-HHhcCCCE-----EECCCCc-----cCHHHHHHHHhhCCCCCEEecCCcCC
Confidence 344444442 255 66766655554 77777664 4454321 23567778877 555544433 3467
Q ss_pred HHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHHHHHhCCeEEee
Q 022088 122 TERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITY 167 (303)
Q Consensus 122 ~~~l~~~~~~~~~~~~~q~~~n~l~~-~~~~~~~~~~~~~gi~via~ 167 (303)
.+.++++++. ...+++|+..+-.-- ....++..+|+++|+.++..
T Consensus 259 ~~~~~~~i~~-~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~h 304 (401)
T 2hzg_A 259 FHMAQHLMDY-GRIGFIQIDCGRIGGLGPAKRVADAAQARGITYVNH 304 (401)
T ss_dssp HHHHHHHHHH-SCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHHC-CCCCEEEeCcchhCCHHHHHHHHHHHHHcCCEEecC
Confidence 8889888876 347777776554311 11347899999999998866
No 135
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=30.63 E-value=1.6e+02 Score=26.17 Aligned_cols=92 Identities=11% Similarity=0.007 Sum_probs=60.3
Q ss_pred HHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCc-cEEEecCCCHHHHHHHHHcCCCeeeeccccccccc-Ch
Q 022088 72 SRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RP 149 (303)
Q Consensus 72 SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~~q~~~n~l~~-~~ 149 (303)
-+++|. +.+++ ++-.|-+ + ++.+.+++++-.| -+.|=|.++.+.++++++. ..++++|+..+..-- ..
T Consensus 213 ~~~~l~-~~~~i-~iEeP~~---~----~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~-~a~d~v~~k~~~~GGit~ 282 (386)
T 3fv9_G 213 MLSLLP-PGLDI-VLEAPCA---S----WAETKSLRARCALPLLLDELIQTETDLIAAIRD-DLCDGVGLKVSKQGGITP 282 (386)
T ss_dssp HHHHSC-SSCCC-EEECCCS---S----HHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHT-TCCSEEEEEHHHHTSHHH
T ss_pred HHHHhh-ccCCc-EEecCCC---C----HHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHh-CCCCEEEECccccCCHHH
Confidence 345553 34567 7777643 2 4556777766444 3556667888999999886 347778877655311 12
Q ss_pred hhhHHHHHHHhCCeEEeecccccc
Q 022088 150 QQKMAELCQLTGVKLITYGTVMGG 173 (303)
Q Consensus 150 ~~~~~~~~~~~gi~via~spl~~G 173 (303)
..++...|+++|+.++..+.+.++
T Consensus 283 ~~~i~~~A~~~gi~~~~~~~~es~ 306 (386)
T 3fv9_G 283 MLRQRAIAAAAGMVMSVQDTVGSQ 306 (386)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCCH
T ss_pred HHHHHHHHHHcCCEEEeCCCCCCH
Confidence 346899999999999977655444
No 136
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=30.43 E-value=1.6e+02 Score=24.73 Aligned_cols=30 Identities=10% Similarity=0.201 Sum_probs=15.6
Q ss_pred HHHHhhCCCCceeeeccCCCCHhHHHHhHhh
Q 022088 237 VRYILDQPAVAGSMIGVRLGLAEHIQDTNAI 267 (303)
Q Consensus 237 l~~~l~~~~v~~vi~G~~~~~~~~l~en~~a 267 (303)
++-+.+.-.+ .+++|.-.++++|+.+.+.+
T Consensus 198 v~~vr~~~~~-pv~vGfGI~~~e~~~~~~~~ 227 (267)
T 3vnd_A 198 LTQLAEFNAP-PPLLGFGIAEPEQVRAAIKA 227 (267)
T ss_dssp HHHHHTTTCC-CEEECSSCCSHHHHHHHHHT
T ss_pred HHHHHHhcCC-CEEEECCcCCHHHHHHHHHc
Confidence 3444443322 23555555588888855543
No 137
>2c4w_A 3-dehydroquinate dehydratase; 3-dehydroquinase, shikimate pathway, aromatic amino acid biosynthesis, lyase, sulphonamide; HET: GAJ; 1.55A {Helicobacter pylori} PDB: 2c57_A* 2xda_A* 1j2y_A* 2wks_A* 2xb9_A* 2c4v_A* 2xd9_A*
Probab=30.35 E-value=1.1e+02 Score=24.19 Aligned_cols=82 Identities=12% Similarity=0.110 Sum_probs=59.0
Q ss_pred CCCCHHHHHHHHHHHHh--hcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHc---CCccEEEecCCCHHHHHHHHHcC
Q 022088 58 VKMTSSIVRESIDVSRR--RMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEE---GKIKTVALTNFDTERLRIILENG 132 (303)
Q Consensus 58 ~~~~~~~i~~sve~SL~--~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~---G~ir~iGvS~~~~~~l~~~~~~~ 132 (303)
+..|-+.+.+.+.+--+ .+|+ .++.+|--. ..+.++.+.+...+ |.|-.=|.-+|+.-.++.++..
T Consensus 32 G~~Tl~di~~~l~~~a~~~~~g~-~l~~~QSN~-------EGeLId~Ih~a~~~~~dgIIINpgAyTHtSvAlrDAl~~- 102 (176)
T 2c4w_A 32 GMVTLDQIHEIMQTFVKQGNLDV-ELEFFQTNF-------EGEIIDKIQESVGSEYEGIIINPGAFSHTSIAIADAIML- 102 (176)
T ss_dssp TSCCHHHHHHHHHHHHHHTTCCE-EEEEEECSC-------HHHHHHHHHHHHSSSCCEEEEECGGGGGTCHHHHHHHHT-
T ss_pred CcCCHHHHHHHHHHHhccccCCC-EEEEEeeCc-------HHHHHHHHHHhccCCeeEEEECcchhccchHHHHHHHHh-
Confidence 35688999999999888 8886 455554321 46888999988765 4455556677777788888876
Q ss_pred CCeeeecccccccccC
Q 022088 133 IPVVSNQVQHSVVDMR 148 (303)
Q Consensus 133 ~~~~~~q~~~n~l~~~ 148 (303)
+..-++.++.|-...+
T Consensus 103 v~~P~VEVHiSNi~aR 118 (176)
T 2c4w_A 103 AGKPVIEVHLTNIQAR 118 (176)
T ss_dssp SSSCEEEEESSCGGGS
T ss_pred CCCCEEEEEecCcccc
Confidence 5666778888777543
No 138
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=30.26 E-value=1.4e+02 Score=24.62 Aligned_cols=56 Identities=14% Similarity=0.217 Sum_probs=37.2
Q ss_pred HHHHHHHHc--CCccEEEec-CCCHHHHHHHHHcCCCeeeecccccccccChhhhHHHHHHHhCCeEEe
Q 022088 101 NHLTDLKEE--GKIKTVALT-NFDTERLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLIT 166 (303)
Q Consensus 101 ~al~~l~~~--G~ir~iGvS-~~~~~~l~~~~~~~~~~~~~q~~~n~l~~~~~~~~~~~~~~~gi~via 166 (303)
+.+++++++ +. .+|.. ..+.++++.+++.|..|.+. + ....+++++|++.|+.++.
T Consensus 74 e~I~~l~~~~~~~--~iGaGTVlt~~~a~~Ai~AGA~fIvs-----P---~~~~~vi~~~~~~gi~~ip 132 (232)
T 4e38_A 74 EAIRLLRQAQPEM--LIGAGTILNGEQALAAKEAGATFVVS-----P---GFNPNTVRACQEIGIDIVP 132 (232)
T ss_dssp HHHHHHHHHCTTC--EEEEECCCSHHHHHHHHHHTCSEEEC-----S---SCCHHHHHHHHHHTCEEEC
T ss_pred HHHHHHHHhCCCC--EEeECCcCCHHHHHHHHHcCCCEEEe-----C---CCCHHHHHHHHHcCCCEEc
Confidence 344444443 34 44443 45789999999987766642 2 2345799999999998875
No 139
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=30.24 E-value=1.9e+02 Score=23.51 Aligned_cols=18 Identities=0% Similarity=-0.145 Sum_probs=14.2
Q ss_pred hhHHHHHHHhCCeEEeec
Q 022088 151 QKMAELCQLTGVKLITYG 168 (303)
Q Consensus 151 ~~~~~~~~~~gi~via~s 168 (303)
...++.|++.|...+...
T Consensus 96 ~~~i~~A~~lGa~~v~~~ 113 (269)
T 3ngf_A 96 DIALHYALALDCRTLHAM 113 (269)
T ss_dssp HHHHHHHHHTTCCEEECC
T ss_pred HHHHHHHHHcCCCEEEEc
Confidence 467889999999887653
No 140
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=30.23 E-value=1.5e+02 Score=23.99 Aligned_cols=87 Identities=13% Similarity=0.083 Sum_probs=54.7
Q ss_pred EEEEecCCCCCCcHHHHHH-HHHHHHHcCCccEEEecCCCHHHHHHHHHcCC--Ceeeeccccccccc---ChhhhHHHH
Q 022088 83 MLQFHWWDYSNPGYLDALN-HLTDLKEEGKIKTVALTNFDTERLRIILENGI--PVVSNQVQHSVVDM---RPQQKMAEL 156 (303)
Q Consensus 83 l~~lH~~~~~~~~~~~~~~-al~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~--~~~~~q~~~n~l~~---~~~~~~~~~ 156 (303)
++|+-.|.... .+++++ +.+++++. -|++|=|.+.+.+....+.+. . ++.+|--.+..-.+ ...++..+.
T Consensus 25 i~YF~~~G~eN--T~~tl~la~era~e~-~Ik~iVVASssG~TA~k~~e~-~~~~lVvVTh~~GF~~pg~~e~~~e~~~~ 100 (206)
T 1t57_A 25 ICYFEEPGKEN--TERVLELVGERADQL-GIRNFVVASVSGETALRLSEM-VEGNIVSVTHHAGFREKGQLELEDEARDA 100 (206)
T ss_dssp EEEESSCSGGG--HHHHHHHHHHHHHHH-TCCEEEEECSSSHHHHHHHTT-CCSEEEEECCCTTSSSTTCCSSCHHHHHH
T ss_pred EEEecCCCccc--HHHHHHHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHH-ccCCEEEEeCcCCCCCCCCCcCCHHHHHH
Confidence 45666654433 466666 44555555 499999999888887777765 2 44443333332211 225688999
Q ss_pred HHHhCCeEEeecccccc
Q 022088 157 CQLTGVKLITYGTVMGG 173 (303)
Q Consensus 157 ~~~~gi~via~spl~~G 173 (303)
.++.|+.++..+=+-.|
T Consensus 101 L~~~G~~V~t~tH~lsG 117 (206)
T 1t57_A 101 LLERGVNVYAGSHALSG 117 (206)
T ss_dssp HHHHTCEEECCSCTTTT
T ss_pred HHhCCCEEEEeeccccc
Confidence 99999999876554444
No 141
>3b7h_A Prophage LP1 protein 11; structural genomics, PSI2, MCSG, protein structure initiative, midwest center for structural genomics; 2.00A {Lactobacillus plantarum WCFS1}
Probab=30.18 E-value=25 Score=22.75 Aligned_cols=23 Identities=17% Similarity=0.150 Sum_probs=16.0
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHH
Q 022088 218 LQTLKRIASKHGVSIPVVAVRYI 240 (303)
Q Consensus 218 ~~~l~~ia~~~g~s~~qlal~~~ 240 (303)
.+.++.+..+.|+|..++|-+--
T Consensus 9 ~~~l~~~r~~~g~sq~~lA~~~g 31 (78)
T 3b7h_A 9 SEHLMELITQQNLTINRVATLAG 31 (78)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHHHHHHC
Confidence 36677777778888777775543
No 142
>2r6o_A Putative diguanylate cyclase/phosphodiesterase (G domains); ggdef and EAL domains, structural genomics, PSI-2; 1.80A {Thiobacillus denitrificans} PDB: 3ii8_A* 3n3t_A*
Probab=30.15 E-value=58 Score=27.78 Aligned_cols=115 Identities=10% Similarity=0.021 Sum_probs=66.7
Q ss_pred ceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCcccEE-EEecCCCCCCcHHHHHHHHHHHHHcCCccEE---EecCCC
Q 022088 46 SEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDML-QFHWWDYSNPGYLDALNHLTDLKEEGKIKTV---ALTNFD 121 (303)
Q Consensus 46 ~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iDl~-~lH~~~~~~~~~~~~~~al~~l~~~G~ir~i---GvS~~~ 121 (303)
.+.|+-.+.+. .+....+...+.+.|++.+.+.=-+. -|-....... .+.+.+.+..|++.|---++ |....+
T Consensus 114 ~~~lsiNls~~--~l~~~~~~~~l~~~l~~~~~~~~~l~lEItE~~~~~~-~~~~~~~l~~Lr~~G~~ialDDFGtG~ss 190 (294)
T 2r6o_A 114 DLTLSVNISTR--QFEGEHLTRAVDRALARSGLRPDCLELEITENVMLVM-TDEVRTCLDALRARGVRLALDDFGTGYSS 190 (294)
T ss_dssp TCCEEEEECGG--GGGGGHHHHHHHHHHHHHCCCGGGEEEEEEGGGGGGC-CHHHHHHHHHHHHHTCEEEEEEETSSCBC
T ss_pred CeEEEEEeCHH--HhCCcHHHHHHHHHHHHcCCCcCEEEEEEeCCchhhC-hHHHHHHHHHHHHCCCEEEEECCCCCchh
Confidence 35566565543 23345677888899998887542221 1222111112 35788899999999974333 444334
Q ss_pred HHHHHHHHHcCCCeeeecccccccccC--------hhhhHHHHHHHhCCeEEeec
Q 022088 122 TERLRIILENGIPVVSNQVQHSVVDMR--------PQQKMAELCQLTGVKLITYG 168 (303)
Q Consensus 122 ~~~l~~~~~~~~~~~~~q~~~n~l~~~--------~~~~~~~~~~~~gi~via~s 168 (303)
...+.. .+++.+-+.-+++..- .-..++..|+..|+.++|=.
T Consensus 191 l~~L~~-----l~~d~iKID~sfv~~i~~~~~~~~iv~~ii~la~~lg~~vvAEG 240 (294)
T 2r6o_A 191 LSYLSQ-----LPFHGLKIDQSFVRKIPAHPSETQIVTTILALARGLGMEVVAEG 240 (294)
T ss_dssp HHHHHH-----SCCCEEEECHHHHTTTTTSHHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred HHHHHh-----CCCCEEEECHHHHhhhhcChHHHHHHHHHHHHHHHCCCEEEEec
Confidence 444332 3556555554444321 12458899999999998643
No 143
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=29.83 E-value=71 Score=28.32 Aligned_cols=73 Identities=12% Similarity=0.069 Sum_probs=48.2
Q ss_pred HHHHHHHHHcCCc-cEEEecCCCHHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHHHHHhCCeEEeecccccc
Q 022088 100 LNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 173 (303)
Q Consensus 100 ~~al~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~~q~~~n~l~~-~~~~~~~~~~~~~gi~via~spl~~G 173 (303)
++.+.+++++-.| -..|=+.++.++++++++. ..++++|+..+-.-- ....++...|+++|+.++..+.+.+|
T Consensus 231 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~-~~~d~v~~k~~~~GGit~~~~i~~~a~~~gi~~~~~~~~es~ 305 (377)
T 3my9_A 231 LDAMAGFAAALDTPILADESCFDAVDLMEVVRR-QAADAISVKIMKCGGLMKAQSLMAIADTAGLPGYGGTLWEGG 305 (377)
T ss_dssp HHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHH-TCCSEEECCHHHHTSHHHHHHHHHHHHHHTCCEECCEECCSH
T ss_pred HHHHHHHHHhCCCCEEECCccCCHHHHHHHHHc-CCCCEEEecccccCCHHHHHHHHHHHHHcCCeEecCCCCCcH
Confidence 4667777765444 3445566788899888876 346777776554310 12346889999999999766554443
No 144
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=29.76 E-value=34 Score=29.76 Aligned_cols=69 Identities=13% Similarity=0.185 Sum_probs=47.8
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHhhCCCCceeeeccCCCCHhHHHHhHhhhcC--------C--CCHHHHHHHHHHHhcCC
Q 022088 219 QTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFML--------S--LDEDDVNSIQEVTKKGK 288 (303)
Q Consensus 219 ~~l~~ia~~~g~s~~qlal~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~~~--------~--L~~e~~~~i~~~~~~~~ 288 (303)
++.+++|+++|+..+=--+.=+++.+.++.|++.+. +..|.+-.+++++. | ++.+|.++|.++.++..
T Consensus 60 ~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~I~tP--~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~~ 137 (350)
T 4had_A 60 TRAREMADRFSVPHAFGSYEEMLASDVIDAVYIPLP--TSQHIEWSIKAADAGKHVVCEKPLALKAGDIDAVIAARDRNK 137 (350)
T ss_dssp HHHHHHHHHHTCSEEESSHHHHHHCSSCSEEEECSC--GGGHHHHHHHHHHTTCEEEECSCCCSSGGGGHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCeeeCCHHHHhcCCCCCEEEEeCC--CchhHHHHHHHHhcCCEEEEeCCcccchhhHHHHHHHHHHcC
Confidence 667888999997422112344677888999888888 77777766666532 4 56788888888776644
Q ss_pred C
Q 022088 289 D 289 (303)
Q Consensus 289 ~ 289 (303)
.
T Consensus 138 ~ 138 (350)
T 4had_A 138 V 138 (350)
T ss_dssp C
T ss_pred C
Confidence 3
No 145
>2a6c_A Helix-turn-helix motif; putative transcriptional regulator, structural genomics, JOI for structural genomics, JCSG; HET: CIT; 1.90A {Nitrosomonas europaea} SCOP: a.35.1.13
Probab=29.66 E-value=41 Score=22.34 Aligned_cols=27 Identities=19% Similarity=0.073 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHhh
Q 022088 216 VLLQTLKRIASKHGVSIPVVAVRYILD 242 (303)
Q Consensus 216 ~~~~~l~~ia~~~g~s~~qlal~~~l~ 242 (303)
...+.++.+.++.|+|..++|-+--++
T Consensus 18 ~~~~~l~~~r~~~glsq~elA~~~gis 44 (83)
T 2a6c_A 18 QLLIVLQEHLRNSGLTQFKAAELLGVT 44 (83)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHCcC
Confidence 345778888888899988887665433
No 146
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=29.66 E-value=2.5e+02 Score=23.97 Aligned_cols=88 Identities=15% Similarity=0.056 Sum_probs=57.6
Q ss_pred HhhcCCCcccEEEEe-cCC----CCCCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHcCCCeeeeccccccccc
Q 022088 73 RRRMDVPCLDMLQFH-WWD----YSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM 147 (303)
Q Consensus 73 L~~Lg~d~iDl~~lH-~~~----~~~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~~q~~~n~l~~ 147 (303)
+-.-|-|.||+=--- +|. .....++.+...++.+++++. -|.|-++.++.++++++.|..+. +..|..
T Consensus 61 ~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~~v--piSIDT~~~~Va~aAl~aGa~iI---NdVsg~-- 133 (294)
T 2dqw_A 61 MVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSLGV--PVSVDTRKPEVAEEALKLGAHLL---NDVTGL-- 133 (294)
T ss_dssp HHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHTTCS--CEEEECSCHHHHHHHHHHTCSEE---ECSSCS--
T ss_pred HHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhCCC--eEEEECCCHHHHHHHHHhCCCEE---EECCCC--
Confidence 344589999987532 232 112225567778888876632 47888999999999999864421 222222
Q ss_pred ChhhhHHHHHHHhCCeEEeec
Q 022088 148 RPQQKMAELCQLTGVKLITYG 168 (303)
Q Consensus 148 ~~~~~~~~~~~~~gi~via~s 168 (303)
...++++.+++.|+.++.+.
T Consensus 134 -~d~~m~~v~a~~~~~vVlmh 153 (294)
T 2dqw_A 134 -RDERMVALAARHGVAAVVMH 153 (294)
T ss_dssp -CCHHHHHHHHHHTCEEEEEC
T ss_pred -CChHHHHHHHHhCCCEEEEc
Confidence 23478999999999999875
No 147
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=29.60 E-value=2.9e+02 Score=25.30 Aligned_cols=93 Identities=15% Similarity=0.162 Sum_probs=48.8
Q ss_pred HHHhhcCCCcccEEE---EecC-CCCCCcHHHHHHHHHHHHHc-CCccEE---------EecCCCHH----HHHHHHHcC
Q 022088 71 VSRRRMDVPCLDMLQ---FHWW-DYSNPGYLDALNHLTDLKEE-GKIKTV---------ALTNFDTE----RLRIILENG 132 (303)
Q Consensus 71 ~SL~~Lg~d~iDl~~---lH~~-~~~~~~~~~~~~al~~l~~~-G~ir~i---------GvS~~~~~----~l~~~~~~~ 132 (303)
+.|.++|+++|.+.. ++.+ ....+ +.|+.++.+++. ..++.. |.+++..+ .++.+.+.+
T Consensus 37 ~~L~~~Gv~~IE~g~~atF~~~~r~~~~---d~~e~l~~i~~~~~~~~l~~l~R~~N~~G~~~~~ddv~~~~v~~a~~~G 113 (464)
T 2nx9_A 37 QQLDQIGYWSLECWGGATFDSCIRFLGE---DPWQRLRLLKQAMPNTPLQMLLRGQNLLGYRHYADDVVDTFVERAVKNG 113 (464)
T ss_dssp HHHHTSCCSEEEEEETTHHHHHHHTTCC---CHHHHHHHHHHHCSSSCEEEEECGGGTTSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHcCCCEEEeCcCccccchhhccCC---CHHHHHHHHHHhCCCCeEEEEeccccccCcccccchhhHHHHHHHHhCC
Confidence 468889999999974 2211 00012 234455555543 233333 33344333 344555555
Q ss_pred CCeeeecccccccccChhhhHHHHHHHhCCeEEeec
Q 022088 133 IPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYG 168 (303)
Q Consensus 133 ~~~~~~q~~~n~l~~~~~~~~~~~~~~~gi~via~s 168 (303)
++. +.+-.+.-+-..-...++++++.|..+..+-
T Consensus 114 vd~--i~if~~~sd~~ni~~~i~~ak~~G~~v~~~i 147 (464)
T 2nx9_A 114 MDV--FRVFDAMNDVRNMQQALQAVKKMGAHAQGTL 147 (464)
T ss_dssp CCE--EEECCTTCCTHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCE--EEEEEecCHHHHHHHHHHHHHHCCCEEEEEE
Confidence 443 3333333222334578999999999876544
No 148
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=29.48 E-value=2e+02 Score=23.26 Aligned_cols=18 Identities=33% Similarity=0.510 Sum_probs=14.5
Q ss_pred hhHHHHHHHhCCeEEeec
Q 022088 151 QKMAELCQLTGVKLITYG 168 (303)
Q Consensus 151 ~~~~~~~~~~gi~via~s 168 (303)
...++.|++.|+..+...
T Consensus 87 ~~~i~~a~~lG~~~v~~~ 104 (278)
T 1i60_A 87 KGMMETCKTLGVKYVVAV 104 (278)
T ss_dssp HHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHcCCCEEEEe
Confidence 467889999999988763
No 149
>2r1j_L Repressor protein C2; protein-DNA complex, helix-turn-helix, DNA-binding, transcription, transcription regulation; 1.53A {Enterobacteria phage P22} SCOP: a.35.1.2 PDB: 3jxb_C 3jxc_L 3jxd_L
Probab=29.36 E-value=19 Score=22.48 Aligned_cols=22 Identities=5% Similarity=-0.022 Sum_probs=13.7
Q ss_pred HHHHHHHHHhCCCHHHHHHHHH
Q 022088 219 QTLKRIASKHGVSIPVVAVRYI 240 (303)
Q Consensus 219 ~~l~~ia~~~g~s~~qlal~~~ 240 (303)
+.++.+.++.|+|..++|-+.-
T Consensus 8 ~~l~~~r~~~g~s~~~lA~~~g 29 (68)
T 2r1j_L 8 ERIRARRKKLKIRQAALGKMVG 29 (68)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHT
T ss_pred HHHHHHHHHcCCCHHHHHHHHC
Confidence 4566666666777766665543
No 150
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=29.31 E-value=1.4e+02 Score=24.00 Aligned_cols=18 Identities=6% Similarity=-0.088 Sum_probs=14.4
Q ss_pred hhHHHHHHHhCCeEEeec
Q 022088 151 QKMAELCQLTGVKLITYG 168 (303)
Q Consensus 151 ~~~~~~~~~~gi~via~s 168 (303)
...++.|++.|+..+...
T Consensus 88 ~~~i~~a~~lG~~~v~~~ 105 (260)
T 1k77_A 88 DLALEYALALNCEQVHVM 105 (260)
T ss_dssp HHHHHHHHHTTCSEEECC
T ss_pred HHHHHHHHHcCCCEEEEC
Confidence 468889999999888653
No 151
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=29.24 E-value=2.7e+02 Score=23.81 Aligned_cols=100 Identities=11% Similarity=0.131 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHhhcCCCcccEEEEe-cCCCCCCcHHH----HHHHHHHHHHc-CCccEEEecCCCHHHHHHHHHcCCCe
Q 022088 62 SSIVRESIDVSRRRMDVPCLDMLQFH-WWDYSNPGYLD----ALNHLTDLKEE-GKIKTVALTNFDTERLRIILENGIPV 135 (303)
Q Consensus 62 ~~~i~~sve~SL~~Lg~d~iDl~~lH-~~~~~~~~~~~----~~~al~~l~~~-G~ir~iGvS~~~~~~l~~~~~~~~~~ 135 (303)
.+.+.+..++.+ .-|-|.||+-.-- +|.......++ +...++.++++ +. -|.|-++.++.++++++.|..+
T Consensus 62 ~~~a~~~a~~~v-~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~v--piSIDT~~~~V~~aAl~aGa~i 138 (297)
T 1tx2_A 62 VDAAVRHAKEMR-DEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVKL--PISIDTYKAEVAKQAIEAGAHI 138 (297)
T ss_dssp HHHHHHHHHHHH-HTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSCS--CEEEECSCHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHHH-HcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCCc--eEEEeCCCHHHHHHHHHcCCCE
Confidence 344555444433 5788888887533 23322211233 34444566554 33 4778899999999999986432
Q ss_pred eeecccccccccChhhhHHHHHHHhCCeEEeecc
Q 022088 136 VSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGT 169 (303)
Q Consensus 136 ~~~q~~~n~l~~~~~~~~~~~~~~~gi~via~sp 169 (303)
. +..|..+ .++++++.+++.|..++.+..
T Consensus 139 I---Ndvsg~~--~d~~m~~~aa~~g~~vVlmh~ 167 (297)
T 1tx2_A 139 I---NDIWGAK--AEPKIAEVAAHYDVPIILMHN 167 (297)
T ss_dssp E---EETTTTS--SCTHHHHHHHHHTCCEEEECC
T ss_pred E---EECCCCC--CCHHHHHHHHHhCCcEEEEeC
Confidence 2 2233322 135789999999999998754
No 152
>3rfa_A Ribosomal RNA large subunit methyltransferase N; radical SAM, S-adenosylmethionine, iron sulfur cluster, oxidoreductase; HET: SAM; 2.05A {Escherichia coli} PDB: 3rf9_A*
Probab=29.14 E-value=2.9e+02 Score=24.77 Aligned_cols=89 Identities=17% Similarity=0.107 Sum_probs=58.2
Q ss_pred EEEecCCCC----------CCcHHHHHHHHHHHH-HcCC------ccEEEec--CCCHHHHHHHHHc--CCCeeeecccc
Q 022088 84 LQFHWWDYS----------NPGYLDALNHLTDLK-EEGK------IKTVALT--NFDTERLRIILEN--GIPVVSNQVQH 142 (303)
Q Consensus 84 ~~lH~~~~~----------~~~~~~~~~al~~l~-~~G~------ir~iGvS--~~~~~~l~~~~~~--~~~~~~~q~~~ 142 (303)
+-||.+++. ...+++++++++++. +.|. ++++=+. |.+.+++.++.+. +.+..++-++|
T Consensus 232 iSLka~d~e~~~~i~pv~~~~~le~vl~ai~~~~~~~g~~~~~V~ie~vLI~GvNDs~e~~~~La~ll~~l~~~VnLIpy 311 (404)
T 3rfa_A 232 ISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPW 311 (404)
T ss_dssp EECCCSSHHHHHHHSGGGGTSCHHHHHHHHHHHHHHCTTTTTCEEEEEEEBTTTTCSHHHHHHHHHHTTTSCEEEEEEEC
T ss_pred ecccCCCHHHHHHhcCCccCCCHHHHHHHHHHHHHHhCCCcccEEEEEEEecCCCCCHHHHHHHHHHHHcCCCcEEEEec
Confidence 457877531 122678899996654 5565 4565554 4567788877765 45566777889
Q ss_pred cccccCh--------hhhHHHHHHHhCCeEEeeccccc
Q 022088 143 SVVDMRP--------QQKMAELCQLTGVKLITYGTVMG 172 (303)
Q Consensus 143 n~l~~~~--------~~~~~~~~~~~gi~via~spl~~ 172 (303)
|++.... -..+.+.++++|+.+..+.+-+.
T Consensus 312 nP~~~~~~~~ps~e~i~~f~~iL~~~Gi~vtiR~~~G~ 349 (404)
T 3rfa_A 312 NPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGD 349 (404)
T ss_dssp CCCTTCCCCBCCHHHHHHHHHHHHHTTCEEEECCCCCC
T ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHcCCcEEEcCCCCc
Confidence 8864211 13466778889999988876544
No 153
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=29.13 E-value=2.7e+02 Score=24.35 Aligned_cols=86 Identities=8% Similarity=-0.036 Sum_probs=55.9
Q ss_pred cEEEEecCCCCCCcHHHHHHHHHHHHHcCCc-cEEEecCCCHHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHHHHH
Q 022088 82 DMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQL 159 (303)
Q Consensus 82 Dl~~lH~~~~~~~~~~~~~~al~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~~q~~~n~l~~-~~~~~~~~~~~~ 159 (303)
++.++..|-+.. -++.+.+++++-.| -..|=+.++.++++++++. ..++++|+..+-.-- ....++...|++
T Consensus 215 ~i~~iEqP~~~~-----~~~~~~~l~~~~~iPia~dE~~~~~~~~~~~~~~-~~~d~v~~k~~~~GGit~~~~i~~~A~~ 288 (370)
T 1chr_A 215 GVELIEQPVGRE-----NTQALRRLSDNNRVAIMADESLSTLASAFDLARD-RSVDVFSLKLCNMGGVSATQKIAAVAEA 288 (370)
T ss_dssp TEEEEECCSCTT-----CHHHHHHHHHHSCSEEEESSSCCSHHHHHHHHTT-TSCSEEEECTTTSCSHHHHHHHHHHHHH
T ss_pred CCCEEECCCCcc-----cHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHc-CCCCEEEECccccCCHHHHHHHHHHHHH
Confidence 455566654322 24566777765444 3445566788899888876 357788887655411 123568999999
Q ss_pred hCCeEEeecccccc
Q 022088 160 TGVKLITYGTVMGG 173 (303)
Q Consensus 160 ~gi~via~spl~~G 173 (303)
+|+.++..+.+.+|
T Consensus 289 ~g~~~~~~~~~es~ 302 (370)
T 1chr_A 289 SGIASYGGTMLDST 302 (370)
T ss_dssp HTCEEEECCSCCTT
T ss_pred cCCeEEecCCCccH
Confidence 99999877666554
No 154
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=29.02 E-value=2.8e+02 Score=23.89 Aligned_cols=88 Identities=9% Similarity=0.049 Sum_probs=58.6
Q ss_pred hcCCCcccEEEE-ecCCCCCCcHHHHHHHHHHHHHc-CCccEEEe-cC----CCHHHHHHHHHcCC--Ceeeeccccccc
Q 022088 75 RMDVPCLDMLQF-HWWDYSNPGYLDALNHLTDLKEE-GKIKTVAL-TN----FDTERLRIILENGI--PVVSNQVQHSVV 145 (303)
Q Consensus 75 ~Lg~d~iDl~~l-H~~~~~~~~~~~~~~al~~l~~~-G~ir~iGv-S~----~~~~~l~~~~~~~~--~~~~~q~~~n~l 145 (303)
..|.|.||+=.- -+|+......++.++.++.+++. +.. +.| -+ ++++.++++++.+. ++-+|-+.- .
T Consensus 85 ~~GAdiIDIg~~StrP~~~~vs~eee~~vV~~v~~~~~vp--lsI~DT~~~~~~~~V~eaal~aga~~k~iINdvs~--~ 160 (310)
T 2h9a_B 85 EYGADIVALRLVSAHPDGQNRSGAELAEVCKAVADAIDVP--LMIIGCGVEEKDAEIFPVIGEALSGRNCLLSSATK--D 160 (310)
T ss_dssp HTTCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCSSC--EEEECCSCHHHHHHHHHHHHHHTTTSCCEEEEECT--T
T ss_pred HcCCcEEEEeCccCCCCCCCCCHHHHHHHHHHHHHhCCce--EEEECCCCCCCCHHHHHHHHHhCCCCCCEEEECCC--C
Confidence 789999998764 23443323356777778888765 433 455 55 77889999988743 233333322 1
Q ss_pred ccChhhhHHHHHHHhCCeEEeecc
Q 022088 146 DMRPQQKMAELCQLTGVKLITYGT 169 (303)
Q Consensus 146 ~~~~~~~~~~~~~~~gi~via~sp 169 (303)
...++++.+++.|..++.+.+
T Consensus 161 ---~~~~~~~~aa~~g~~vv~m~~ 181 (310)
T 2h9a_B 161 ---NYKPIVATCMVHGHSVVASAP 181 (310)
T ss_dssp ---THHHHHHHHHHHTCEEEEECS
T ss_pred ---ccHHHHHHHHHhCCCEEEECh
Confidence 245799999999999999876
No 155
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=28.97 E-value=2.5e+02 Score=23.61 Aligned_cols=17 Identities=18% Similarity=0.274 Sum_probs=14.4
Q ss_pred hhHHHHHHHhCCeEEee
Q 022088 151 QKMAELCQLTGVKLITY 167 (303)
Q Consensus 151 ~~~~~~~~~~gi~via~ 167 (303)
+..++.|++.|+..+..
T Consensus 117 ~~~i~~A~~lG~~~v~~ 133 (305)
T 3obe_A 117 KKATDIHAELGVSCMVQ 133 (305)
T ss_dssp HHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEe
Confidence 46889999999998874
No 156
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=28.96 E-value=77 Score=28.20 Aligned_cols=102 Identities=6% Similarity=-0.039 Sum_probs=61.8
Q ss_pred CCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCc-cEEEecCCCHHHHHHHHHcCCCeeee
Q 022088 60 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSN 138 (303)
Q Consensus 60 ~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~~ 138 (303)
++.+...+ +-+.|+.+++++| ..|-+. +-++.+.+++++-.| -..|=+.++.++++++++. ..++++
T Consensus 203 ~~~~~A~~-~~~~L~~~~i~~i-----EqP~~~-----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~-~~~d~v 270 (385)
T 3i6e_A 203 LEIDEAVP-RVLDVAQFQPDFI-----EQPVRA-----HHFELMARLRGLTDVPLLADESVYGPEDMVRAAHE-GICDGV 270 (385)
T ss_dssp CCGGGHHH-HHHHHHTTCCSCE-----ECCSCT-----TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHH-TCCSEE
T ss_pred CCHHHHHH-HHHHHHhcCCCEE-----ECCCCc-----ccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHc-CCCCEE
Confidence 34444332 2345556665543 444322 225667777776444 3555667888999988876 346777
Q ss_pred ccccccccc-ChhhhHHHHHHHhCCeEEeecccccc
Q 022088 139 QVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 173 (303)
Q Consensus 139 q~~~n~l~~-~~~~~~~~~~~~~gi~via~spl~~G 173 (303)
|+..+-.-- ....++...|+++|+.++..+.+.+|
T Consensus 271 ~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~es~ 306 (385)
T 3i6e_A 271 SIKIMKSGGLTRAQTVARIAAAHGLMAYGGDMFEAG 306 (385)
T ss_dssp EECHHHHTSHHHHHHHHHHHHHTTCEEEECCCSCCH
T ss_pred EecccccCCHHHHHHHHHHHHHcCCEEEeCCCCccH
Confidence 776554310 11346899999999999876655443
No 157
>3s8q_A R-M controller protein; protein-DNA complex, helix-turn-helix; HET: DNA; 2.10A {Enterobacter SP} SCOP: a.35.1.0 PDB: 3clc_A* 3ufd_A*
Probab=28.94 E-value=56 Score=21.34 Aligned_cols=55 Identities=15% Similarity=0.097 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHhhCCCCceeeeccCCCCHhHHHHhHhhhcC
Q 022088 216 VLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFML 270 (303)
Q Consensus 216 ~~~~~l~~ia~~~g~s~~qlal~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~~~ 270 (303)
..-+.++.+-++.|+|..++|-+--++...+.-..-|-+..+.+.+...+.+++.
T Consensus 11 ~~g~~lk~~R~~~glsq~~lA~~~gis~~~i~~~e~g~~~~~~~~l~~ia~~l~v 65 (82)
T 3s8q_A 11 KVSFVIKKIRLEKGMTQEDLAYKSNLDRTYISGIERNSRNLTIKSLELIMKGLEV 65 (82)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHTTCCCCBHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHhCcCHHHHHHHHCCCCCCCHHHHHHHHHHHCc
Confidence 3446777777788888877776654444333333334332245666666666654
No 158
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=28.94 E-value=90 Score=27.43 Aligned_cols=73 Identities=10% Similarity=0.036 Sum_probs=50.0
Q ss_pred HHHHHHHHHcCCcc-EEEecCCCHHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHHHHHhCCeEEeecccccc
Q 022088 100 LNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTVMGG 173 (303)
Q Consensus 100 ~~al~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~~q~~~n~l~~-~~~~~~~~~~~~~gi~via~spl~~G 173 (303)
++.+.+|++...|. +.|=|.++.+.+.++++. ..++++|+.....-- ..-.++...|+++|+.++..+.+.++
T Consensus 228 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~-~a~d~i~~d~~~~GGit~~~~ia~~A~~~gi~~~~~~~~~~~ 302 (370)
T 2chr_A 228 TQALRRLSDNNRVAIMADESLSTLASAFDLARD-RSVDVFSLKLCNMGGVSATQKIAAVAEASGIASYGGTMLDST 302 (370)
T ss_dssp HHHHHHHHHHCSSEEEESSSCCSHHHHHHHHTT-TCCSEECCCHHHHTSHHHHHHHHHHHHHHTCEECCCCCSCCH
T ss_pred hhhhhHHhhhccCCccCCccCCCHHHHHHHHHc-CCCcEEEeCCcccCCHHHHHHHHHHHHHcCCeEEeCCCcccH
Confidence 45677777765553 556667888888888876 346777776654311 11357889999999999877766554
No 159
>3l8m_A Probable thiamine pyrophosphokinase; thiamin diphosphate biosynthetic process, ATP binding, structural genomics, PSI-2; 2.40A {Staphylococcus saprophyticus}
Probab=28.82 E-value=78 Score=25.68 Aligned_cols=41 Identities=10% Similarity=0.046 Sum_probs=35.6
Q ss_pred CCCHHHHHHHHHhhCCCCceeeeccCCCCHhHHHHhHhhhc
Q 022088 229 GVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFM 269 (303)
Q Consensus 229 g~s~~qlal~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~~ 269 (303)
.-|=.++|++|++.++.-..++.|+.-.+.+|.-.|+..+-
T Consensus 74 D~TD~e~Al~~a~~~~~~~I~i~Ga~GgR~DH~lani~ll~ 114 (212)
T 3l8m_A 74 DDTDLALGIDQAVKRGYRNIDVYGATGGRLDHFMGALQILE 114 (212)
T ss_dssp CBCHHHHHHHHHHHTTCCEEEEESCSSSCHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHCCCCEEEEEcCCCCchhHHHHHHHHHH
Confidence 45778999999999988888999998889999999997763
No 160
>1ug2_A 2610100B20RIK gene product; hypothetical protein, MYB-like DNA binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.4.1.3
Probab=28.64 E-value=68 Score=22.41 Aligned_cols=15 Identities=20% Similarity=0.483 Sum_probs=10.7
Q ss_pred cChhhhHHHHHHHhC
Q 022088 147 MRPQQKMAELCQLTG 161 (303)
Q Consensus 147 ~~~~~~~~~~~~~~g 161 (303)
|..++.++..|+++|
T Consensus 38 Re~DR~IL~~cQ~~G 52 (95)
T 1ug2_A 38 READRVILTMCQEQG 52 (95)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred cccCHHHHHHHHhcC
Confidence 445667888888875
No 161
>3g5g_A Regulatory protein; transcriptional regulator, helix-turn-helix, restriction- modification, transcription regulator; 2.80A {Enterobacter SP} PDB: 3fya_A
Probab=28.32 E-value=56 Score=22.72 Aligned_cols=57 Identities=14% Similarity=0.106 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHhhCCCCceeeeccCCCCHhHHHHhHhhhcC
Q 022088 214 FQVLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFML 270 (303)
Q Consensus 214 ~~~~~~~l~~ia~~~g~s~~qlal~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~~~ 270 (303)
...+-+.++++.++.|+|..++|-+--++...+.-+.-|-+..+.+.+...+++++.
T Consensus 26 ~~~ig~~lr~~R~~~gltq~elA~~~gis~~~is~iE~G~~~ps~~~l~~ia~~l~v 82 (99)
T 3g5g_A 26 LSKVSFVIKKIRLEKGMTQEDLAYKSNLDRTYISGIERNSRNLTIKSLELIMKGLEV 82 (99)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHTTCSCCBHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHCcCHHHHHHHHCCCCCCCHHHHHHHHHHHCc
Confidence 334557888888888998888876654444333333334332245666666666654
No 162
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=28.02 E-value=1.2e+02 Score=24.92 Aligned_cols=18 Identities=11% Similarity=0.220 Sum_probs=15.4
Q ss_pred hhHHHHHHHhCCeEEeec
Q 022088 151 QKMAELCQLTGVKLITYG 168 (303)
Q Consensus 151 ~~~~~~~~~~gi~via~s 168 (303)
.++++.++++|+.+.+|.
T Consensus 194 ~~~v~~~~~~G~~V~~WT 211 (250)
T 3ks6_A 194 AGLMAQVQAAGLDFGCWA 211 (250)
T ss_dssp HHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHCCCEEEEEe
Confidence 478889999999999885
No 163
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=27.91 E-value=3e+02 Score=23.90 Aligned_cols=14 Identities=14% Similarity=0.202 Sum_probs=11.3
Q ss_pred HHHHHHcCCceeeh
Q 022088 14 LTWLIYMGLLKISM 27 (303)
Q Consensus 14 v~~Al~~Gi~~~Dt 27 (303)
.+.|.++|+..++.
T Consensus 158 A~~a~~aGfDgVEi 171 (349)
T 3hgj_A 158 ARRALRAGFQVIEL 171 (349)
T ss_dssp HHHHHHTTCCEEEE
T ss_pred HHHHHHcCCCEEEE
Confidence 45688999998886
No 164
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=27.88 E-value=2.7e+02 Score=24.54 Aligned_cols=71 Identities=10% Similarity=-0.042 Sum_probs=39.6
Q ss_pred HHHHHHHhhcCCCcccEEEEecCCCCC-CcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHcCCCeeeeccc
Q 022088 67 ESIDVSRRRMDVPCLDMLQFHWWDYSN-PGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQ 141 (303)
Q Consensus 67 ~sve~SL~~Lg~d~iDl~~lH~~~~~~-~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~~q~~ 141 (303)
..+-+.|+..|+|+|++ |...... ......++.+.++++.=.+--++....+++..+++++.+ ..+++++-
T Consensus 259 ~~la~~le~~Gvd~i~v---~~~~~~~~~~~~~~~~~~~~vr~~~~iPvi~~G~i~~~~a~~~l~~g-~aD~V~~g 330 (376)
T 1icp_A 259 LYMVESLNKYDLAYCHV---VEPRMKTAWEKIECTESLVPMRKAYKGTFIVAGGYDREDGNRALIED-RADLVAYG 330 (376)
T ss_dssp HHHHHHHGGGCCSEEEE---ECCSCCC------CCCCSHHHHHHCCSCEEEESSCCHHHHHHHHHTT-SCSEEEES
T ss_pred HHHHHHHHHcCCCEEEE---cCCcccCCCCccccHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHCC-CCcEEeec
Confidence 34556677888766654 4332110 000012234455666556677777777888888888863 35555544
No 165
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=27.70 E-value=1.7e+02 Score=25.74 Aligned_cols=98 Identities=10% Similarity=-0.060 Sum_probs=63.1
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEE-ecCCC-HHHHHHHHHcCCCee
Q 022088 59 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVA-LTNFD-TERLRIILENGIPVV 136 (303)
Q Consensus 59 ~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iG-vS~~~-~~~l~~~~~~~~~~~ 136 (303)
.++.+...+-++ .|+.+|+++ +..|-+. +.++.+.++++.-.|-=.+ =+.++ .+.++++++. ...+
T Consensus 210 ~~~~~~a~~~~~-~l~~~~i~~-----iE~P~~~-----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~i~~-~~~d 277 (382)
T 1rvk_A 210 WYSRTDALALGR-GLEKLGFDW-----IEEPMDE-----QSLSSYKWLSDNLDIPVVGPESAAGKHWHRAEWIKA-GACD 277 (382)
T ss_dssp TCCHHHHHHHHH-HHHTTTCSE-----EECCSCT-----TCHHHHHHHHHHCSSCEEECSSCSSHHHHHHHHHHT-TCCS
T ss_pred CCCHHHHHHHHH-HHHhcCCCE-----EeCCCCh-----hhHHHHHHHHhhCCCCEEEeCCccCcHHHHHHHHHc-CCCC
Confidence 457776665554 577777654 4555322 2356677777665554443 34567 8999999886 3577
Q ss_pred eeccccccccc-ChhhhHHHHHHHhCCeEEeec
Q 022088 137 SNQVQHSVVDM-RPQQKMAELCQLTGVKLITYG 168 (303)
Q Consensus 137 ~~q~~~n~l~~-~~~~~~~~~~~~~gi~via~s 168 (303)
++|+..+-.-- ....++..+|+++|+.++..+
T Consensus 278 ~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~ 310 (382)
T 1rvk_A 278 ILRTGVNDVGGITPALKTMHLAEAFGMECEVHG 310 (382)
T ss_dssp EEEECHHHHTSHHHHHHHHHHHHHTTCCEEECC
T ss_pred EEeeCchhcCCHHHHHHHHHHHHHcCCeEeecC
Confidence 77876554311 113578999999999998873
No 166
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=27.15 E-value=3e+02 Score=23.60 Aligned_cols=107 Identities=17% Similarity=0.185 Sum_probs=62.6
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCC-----C---cHHHHHHHHHHHHHc-CCccEEEecCCC--------
Q 022088 59 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSN-----P---GYLDALNHLTDLKEE-GKIKTVALTNFD-------- 121 (303)
Q Consensus 59 ~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~-----~---~~~~~~~al~~l~~~-G~ir~iGvS~~~-------- 121 (303)
+.+...+...+.. ++.+|++. ++.|-.-.+.. + .+....+-++.+++. |.=-.||++.+.
T Consensus 82 ~~~~~~l~~~L~~-~~~~GI~n--iLaLrGD~p~~~g~~~~~~~~f~~a~~Lv~~ir~~~g~~f~igvA~yPE~Hp~~~~ 158 (310)
T 3apt_A 82 GQSRKEVAEVLHR-FVESGVEN--LLALRGDPPRGERVFRPHPEGFRYAAELVALIRERYGDRVSVGGAAYPEGHPESES 158 (310)
T ss_dssp TSCHHHHHHHHHH-HHHTTCCE--EEEECCCCSTTCCSCCCCTTSCSSHHHHHHHHHHHHGGGSEEEEEECTTCCTTSSC
T ss_pred CCCHHHHHHHHHH-HHHCCCCE--EEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHhCCCCeEEEEEeCCCcCCCCCC
Confidence 4577777777766 45888764 34443211100 0 023344445555555 742589998763
Q ss_pred H-HHHH---HHHHcCCCeeeecccccccccChhhhHHHHHHHhCCeEEeecccccccc
Q 022088 122 T-ERLR---IILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGTVMGGLL 175 (303)
Q Consensus 122 ~-~~l~---~~~~~~~~~~~~q~~~n~l~~~~~~~~~~~~~~~gi~via~spl~~G~L 175 (303)
. .+++ +-++.|..+.+-|.-|+. ..-..+++.|++.||. .|+--|+.
T Consensus 159 ~~~d~~~Lk~Kv~aGAdf~iTQ~ffD~---~~~~~f~~~~r~~Gi~----vPIi~GIm 209 (310)
T 3apt_A 159 LEADLRHFKAKVEAGLDFAITQLFFNN---AHYFGFLERARRAGIG----IPILPGIM 209 (310)
T ss_dssp HHHHHHHHHHHHHHHCSEEEECCCSCH---HHHHHHHHHHHHTTCC----SCEECEEC
T ss_pred HHHHHHHHHHHHHcCCCEEEecccCCH---HHHHHHHHHHHHcCCC----CeEEEEec
Confidence 2 2233 333447789999999876 3445788999999965 35555553
No 167
>2w6k_A COBE; biosynthetic protein, cobalamin, complete proteome, vitamin B12; 1.70A {Pseudomonas aeruginosa} SCOP: c.151.1.1 PDB: 2bsn_A 2w6l_A
Probab=26.81 E-value=1e+02 Score=23.36 Aligned_cols=50 Identities=20% Similarity=0.246 Sum_probs=32.2
Q ss_pred CCHHHHHHHHHc-----CCCeeeecccccccccChhhhHHHHHHHhCCeEEeecc
Q 022088 120 FDTERLRIILEN-----GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYGT 169 (303)
Q Consensus 120 ~~~~~l~~~~~~-----~~~~~~~q~~~n~l~~~~~~~~~~~~~~~gi~via~sp 169 (303)
.+.+.+.+++.. +..+..+-.--++-....|..++++|++.|+.+..|++
T Consensus 22 ~~~~~i~~ai~~aL~~~~l~~~~v~~latid~K~dE~gL~~~A~~lg~pl~~~~~ 76 (145)
T 2w6k_A 22 CSAEHLRALLERTLGEHGRSLAELDALASIDGKRDEPGLRQLATLLERPVHFLAP 76 (145)
T ss_dssp CCHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSSCCHHHHHHHHHHTSCEEEECH
T ss_pred CCHHHHHHHHHHHHHHcCCCHHHcceEechHHhCCCHHHHHHHHHhCCCcEEeCH
Confidence 456666665543 44444444444443334467899999999999999864
No 168
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=26.80 E-value=1.3e+02 Score=26.62 Aligned_cols=87 Identities=13% Similarity=0.024 Sum_probs=56.9
Q ss_pred ccEEEEecCCCCCCcHHHHHHHHHHHHHcCCc-cEEEecCCCHHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHHHH
Q 022088 81 LDMLQFHWWDYSNPGYLDALNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQ 158 (303)
Q Consensus 81 iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~~q~~~n~l~~-~~~~~~~~~~~ 158 (303)
.++.++..|-+... ++.+.+|.++-.| -..|=|.++.+.++++++. ..++++|+..+-.-- ....++...|+
T Consensus 227 ~~i~~iEqP~~~~d-----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~-~a~d~v~ik~~~~GGit~~~~ia~~A~ 300 (393)
T 1wuf_A 227 YDLEMIEQPFGTKD-----FVDHAWLQKQLKTRICLDENIRSVKDVEQAHSI-GSCRAINLKLARVGGMSSALKIAEYCA 300 (393)
T ss_dssp GTCSEEECCSCSSC-----SHHHHHHHTTCSSEEEECTTCCSHHHHHHHHHH-TCCSEEEECTGGGTSHHHHHHHHHHHH
T ss_pred CCCeEEECCCCCcC-----HHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHh-CCCCEEEeChhhhCCHHHHHHHHHHHH
Confidence 35667777744322 3456677765443 3445566788999998876 346778887665411 11347889999
Q ss_pred HhCCeEEeecccccc
Q 022088 159 LTGVKLITYGTVMGG 173 (303)
Q Consensus 159 ~~gi~via~spl~~G 173 (303)
++|+.++..+.+..|
T Consensus 301 ~~gi~~~~~~~~es~ 315 (393)
T 1wuf_A 301 LNEILVWCGGMLEAG 315 (393)
T ss_dssp HTTCEEEECCCCCCH
T ss_pred HcCCeEEecCCcccH
Confidence 999999877665443
No 169
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=26.42 E-value=2.3e+02 Score=25.11 Aligned_cols=99 Identities=6% Similarity=-0.089 Sum_probs=61.6
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHHcCCCeee
Q 022088 59 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVS 137 (303)
Q Consensus 59 ~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~ 137 (303)
.++.+...+- -+.|+.+++++ +..|-+... .++.+.+++++-.|. ..|=+.++.++++++++. ..+++
T Consensus 209 ~~~~~~A~~~-~~~L~~~~i~~-----iEeP~~~~d----~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~-~a~d~ 277 (392)
T 3ddm_A 209 GWDLPRARQM-AQRLGPAQLDW-----LEEPLRADR----PAAEWAELAQAAPMPLAGGENIAGVAAFETALAA-RSLRV 277 (392)
T ss_dssp CCCHHHHHHH-HHHHGGGCCSE-----EECCSCTTS----CHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHH-TCEEE
T ss_pred CCCHHHHHHH-HHHHHHhCCCE-----EECCCCccc----hHHHHHHHHHhcCCCEEeCCCCCCHHHHHHHHHc-CCCCE
Confidence 4465554432 34566666544 445532211 156777887764443 445566889999998876 35888
Q ss_pred eccccccccc-ChhhhHHHHHHHhCCeEEeec
Q 022088 138 NQVQHSVVDM-RPQQKMAELCQLTGVKLITYG 168 (303)
Q Consensus 138 ~q~~~n~l~~-~~~~~~~~~~~~~gi~via~s 168 (303)
+|+..+-.-- .....+...|+++|+.++..+
T Consensus 278 v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~ 309 (392)
T 3ddm_A 278 MQPDLAKWGGFSGCLPVARAVVAAGLRYCPHY 309 (392)
T ss_dssp ECCCTTTTTHHHHHHHHHHHHHHTTCEECCEE
T ss_pred EEeCcchhCCHHHHHHHHHHHHHcCCEEEecC
Confidence 8887654310 123478999999999987554
No 170
>1kcz_A Beta-methylaspartase; beta zigzag, alpha/beta-barrel, lyase; 1.90A {Clostridium tetanomorphum} SCOP: c.1.11.2 d.54.1.1 PDB: 1kd0_A* 3zvi_A 3zvh_A
Probab=25.55 E-value=2.6e+02 Score=24.87 Aligned_cols=71 Identities=13% Similarity=0.092 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHc-----CC-ccEEEecCCCHHHHHHHHHcCCCeeeecccccccccC-hhhhHHHHHHHhCCeEEeec
Q 022088 97 LDALNHLTDLKEE-----GK-IKTVALTNFDTERLRIILENGIPVVSNQVQHSVVDMR-PQQKMAELCQLTGVKLITYG 168 (303)
Q Consensus 97 ~~~~~al~~l~~~-----G~-ir~iGvS~~~~~~l~~~~~~~~~~~~~q~~~n~l~~~-~~~~~~~~~~~~gi~via~s 168 (303)
.+-++.+.+|.++ .. --..|=|.++.+.++++++. ..++++|+..+-+--- ...++..+|+++|+.++..+
T Consensus 282 ~~d~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~-~a~d~v~ik~~~~GGit~a~~i~~~A~~~gi~~~~~~ 359 (413)
T 1kcz_A 282 QKQMEAMRDLRAELDGRGVDAELVADEWCNTVEDVKFFTDN-KAGHMVQIKTPDLGGVNNIADAIMYCKANGMGAYCGG 359 (413)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEECTTCCSHHHHHHHHHT-TCSSEEEECTGGGSSTHHHHHHHHHHHHTTCEEEECC
T ss_pred cccHHHHHHHHHhhhcCCCCCcEEeCCCcCCHHHHHHHHHh-CCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEecC
Confidence 3456667777765 22 23445566788888888876 3477777776654211 13578999999999999864
No 171
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=25.53 E-value=1.5e+02 Score=25.21 Aligned_cols=66 Identities=11% Similarity=0.045 Sum_probs=40.1
Q ss_pred HHHHHcCCccEEEecCCCHHHHHHHHHc--CCCeeeec-------------cc-------ccccccChhhhHHHHHHHhC
Q 022088 104 TDLKEEGKIKTVALTNFDTERLRIILEN--GIPVVSNQ-------------VQ-------HSVVDMRPQQKMAELCQLTG 161 (303)
Q Consensus 104 ~~l~~~G~ir~iGvS~~~~~~l~~~~~~--~~~~~~~q-------------~~-------~n~l~~~~~~~~~~~~~~~g 161 (303)
+.+++.|....+=+++|+.+.+..+... .++..... ++ +++-......++++.|+++|
T Consensus 149 ~~l~~~~~~~~vii~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~V~~ah~~G 228 (292)
T 3mz2_A 149 QLITDMQAEPYVMITVHDGASARFFYEKNPNFMFEAFVKTKEAVQDYEDNGIPWSHIMAYVGPKITPEVREVIDMLHERG 228 (292)
T ss_dssp HHHHHTTCTTTEEEEESSHHHHHHHHHHCTTCCEEEECCSHHHHHHHHHTTCCGGGEEEEEESSCCHHHHHHHHHHHHTT
T ss_pred HHHHHcCCCCCEEEEECCHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHhCCChhheeeeecccccccCHHHHHHHHHCC
Confidence 3445567777788888888888877664 22222211 00 01101112357899999999
Q ss_pred CeEEeecc
Q 022088 162 VKLITYGT 169 (303)
Q Consensus 162 i~via~sp 169 (303)
+.|.+|.+
T Consensus 229 ~~V~vWTv 236 (292)
T 3mz2_A 229 VMCMISTA 236 (292)
T ss_dssp BCEEEECT
T ss_pred CEEEEEeC
Confidence 99999854
No 172
>2b5a_A C.BCLI; helix-turn-helix motif, gene regulation; 1.54A {Bacillus caldolyticus} SCOP: a.35.1.3
Probab=25.48 E-value=33 Score=22.03 Aligned_cols=53 Identities=25% Similarity=0.132 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHhhCCCCceeeeccCCCCHhHHHHhHhhhc
Q 022088 217 LLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFM 269 (303)
Q Consensus 217 ~~~~l~~ia~~~g~s~~qlal~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~~ 269 (303)
+.+.++.+-.+.|+|..++|-+--++...+.-..-|-+..+.+.+...+.+++
T Consensus 11 ~~~~l~~~r~~~glsq~~lA~~~gis~~~i~~~e~g~~~~~~~~l~~la~~l~ 63 (77)
T 2b5a_A 11 FGRTLKKIRTQKGVSQEELADLAGLHRTYISEVERGDRNISLINIHKICAALD 63 (77)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHTTCSCCBHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHhC
Confidence 34677777777888877777655333332322222333123455555555554
No 173
>2uyg_A 3-dehydroquinate dehydratase; typeii 3-dehydroquinase, lyase; 2.2A {Thermus thermophilus}
Probab=25.42 E-value=1.4e+02 Score=22.82 Aligned_cols=82 Identities=9% Similarity=0.035 Sum_probs=59.2
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHc---CCccEEEecCCCHHHHHHHHHcCCC
Q 022088 58 VKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEE---GKIKTVALTNFDTERLRIILENGIP 134 (303)
Q Consensus 58 ~~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~---G~ir~iGvS~~~~~~l~~~~~~~~~ 134 (303)
+..|.+.+.+.+++--+.+|+ .++.+|--. ..+.++.+.+...+ |.|-.=|.-+|+.-.++.++.. +.
T Consensus 22 G~~tl~di~~~l~~~a~~~g~-~v~~~QSN~-------EgeLId~Ih~a~~~~~dgiIINpgA~THtSvAlrDAl~~-v~ 92 (149)
T 2uyg_A 22 GRTTLEELEALCEAWGAELGL-GVVFRQTNY-------EGQLIEWVQQAHQEGFLAIVLNPGALTHYSYALLDAIRA-QP 92 (149)
T ss_dssp CSCCHHHHHHHHHHHHHHTTC-CEEEEECSC-------HHHHHHHHHHTTTTTCSEEEEECGGGGGTCHHHHHHHHT-SC
T ss_pred CcCCHHHHHHHHHHHHHHcCC-EEEEEeeCC-------HHHHHHHHHHhccCCeeEEEEccchhccccHHHHHHHHh-CC
Confidence 355889999999999999997 466665322 46788888888655 4455556667777888888886 55
Q ss_pred eeeecccccccccC
Q 022088 135 VVSNQVQHSVVDMR 148 (303)
Q Consensus 135 ~~~~q~~~n~l~~~ 148 (303)
.-++.++.|-...+
T Consensus 93 ~P~VEVHiSNi~aR 106 (149)
T 2uyg_A 93 LPVVEVHLTNLHAR 106 (149)
T ss_dssp SCEEEEESSCGGGS
T ss_pred CCEEEEEecCcccc
Confidence 66778888776543
No 174
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=25.42 E-value=2.7e+02 Score=22.45 Aligned_cols=90 Identities=10% Similarity=0.101 Sum_probs=48.4
Q ss_pred HHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHH-HHHcCCccEEEecCC---CHHHHHHHHHc----CCCeeeecccc
Q 022088 71 VSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTD-LKEEGKIKTVALTNF---DTERLRIILEN----GIPVVSNQVQH 142 (303)
Q Consensus 71 ~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~-l~~~G~ir~iGvS~~---~~~~l~~~~~~----~~~~~~~q~~~ 142 (303)
+.++++|.+.|++...|.+. ... .+.++.+.+ +.+.|. +-.+++.+ ..+.+++.++. |.+..++...
T Consensus 37 ~~~~~~G~~~vEl~~~~~~~-~~~--~~~~~~~~~~l~~~gl-~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~p~- 111 (257)
T 3lmz_A 37 KTLERLDIHYLCIKDFHLPL-NST--DEQIRAFHDKCAAHKV-TGYAVGPIYMKSEEEIDRAFDYAKRVGVKLIVGVPN- 111 (257)
T ss_dssp HHHHHTTCCEEEECTTTSCT-TCC--HHHHHHHHHHHHHTTC-EEEEEEEEEECSHHHHHHHHHHHHHHTCSEEEEEEC-
T ss_pred HHHHHhCCCEEEEecccCCC-CCC--HHHHHHHHHHHHHcCC-eEEEEeccccCCHHHHHHHHHHHHHhCCCEEEecCC-
Confidence 34678999999988766532 112 333444444 445554 43344332 44555555443 5554443211
Q ss_pred cccccChhhhHHHHHHHhCCeEEeeccc
Q 022088 143 SVVDMRPQQKMAELCQLTGVKLITYGTV 170 (303)
Q Consensus 143 n~l~~~~~~~~~~~~~~~gi~via~spl 170 (303)
...-+++.+.|++.||.+. +-+.
T Consensus 112 ----~~~l~~l~~~a~~~gv~l~-lEn~ 134 (257)
T 3lmz_A 112 ----YELLPYVDKKVKEYDFHYA-IHLH 134 (257)
T ss_dssp ----GGGHHHHHHHHHHHTCEEE-EECC
T ss_pred ----HHHHHHHHHHHHHcCCEEE-EecC
Confidence 1223468888888898643 4444
No 175
>1y14_A B32, RPB4, DNA-directed RNA polymerase II 32 kDa polypeptide; transferase; 2.30A {Saccharomyces cerevisiae} SCOP: a.60.8.2
Probab=25.22 E-value=2.6e+02 Score=22.24 Aligned_cols=58 Identities=10% Similarity=0.115 Sum_probs=41.7
Q ss_pred HHHHHHHHhCCCHHHHHHHHHhhCCCCceeeeccCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhcCCC
Q 022088 220 TLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGKD 289 (303)
Q Consensus 220 ~l~~ia~~~g~s~~qlal~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~~~~L~~e~~~~i~~~~~~~~~ 289 (303)
.+.+...+++++..++|. +.+ ..+. ++++++..+..+..++++++++.|-..+.+.+.
T Consensus 128 elre~L~~~kL~efE~aq--LaN--------L~Pe--TadEaraLIpSle~rlsdEeLeeILd~L~k~r~ 185 (187)
T 1y14_A 128 AVIQLLKSTGLHPFEVAQ--LGS--------LACD--TADEAKTLIPSLNNKISDDELERILKELSNLET 185 (187)
T ss_dssp HHHHHHHTTTCCHHHHHH--HHH--------SCCS--SHHHHHHHSGGGTTTSCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHhcCCCHHHHHH--cCc--------CCCC--CHHHHHHHHHhhccCCCHHHHHHHHHHHHHhhc
Confidence 344444457888776553 111 1245 899999999999889999999999888877554
No 176
>3h2y_A GTPase family protein; GTP-binding protein YQEH, possibly involved in replication initiation, csgid, IDP90222; HET: DGI; 1.80A {Bacillus anthracis str}
Probab=25.19 E-value=3.4e+02 Score=23.67 Aligned_cols=82 Identities=11% Similarity=0.030 Sum_probs=57.3
Q ss_pred ceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEEecCCCHHHH
Q 022088 46 SEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERL 125 (303)
Q Consensus 46 ~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l 125 (303)
-++|.+|.--.+.....+.+.+.++..++..|....+++.+-. ... ..++++++.+.++.....|--+|-+|.+...+
T Consensus 99 ~ilV~NK~DL~~~~~~~~~~~~~l~~~~~~~g~~~~~v~~iSA-~~g-~gi~~L~~~l~~~~~~~~i~~vG~~nvGKStl 176 (368)
T 3h2y_A 99 VLLVGNKADLIPKSVKHDKVKHWMRYSAKQLGLKPEDVFLISA-AKG-QGIAELADAIEYYRGGKDVYVVGCTNVGKSTF 176 (368)
T ss_dssp EEEEEECGGGSCTTSCHHHHHHHHHHHHHHTTCCCSEEEECCT-TTC-TTHHHHHHHHHHHHTTSCEEEEEBTTSSHHHH
T ss_pred EEEEEEChhcCCcccCHHHHHHHHHHHHHHcCCCcccEEEEeC-CCC-cCHHHHHhhhhhhcccceEEEecCCCCChhHH
Confidence 6889999753322335567777777778888865446555432 222 23788888888888788899999999988766
Q ss_pred HHHH
Q 022088 126 RIIL 129 (303)
Q Consensus 126 ~~~~ 129 (303)
-..+
T Consensus 177 iN~L 180 (368)
T 3h2y_A 177 INRM 180 (368)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
No 177
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=25.12 E-value=3.6e+02 Score=23.83 Aligned_cols=99 Identities=9% Similarity=0.074 Sum_probs=57.9
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCC-ccEEEecCCCHHHHHHHHHcCCCeee
Q 022088 59 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGK-IKTVALTNFDTERLRIILENGIPVVS 137 (303)
Q Consensus 59 ~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~-ir~iGvS~~~~~~l~~~~~~~~~~~~ 137 (303)
.++.+. +..+-+.|.++|+++|.+-+ |. . .+...++++.+.+.|+ ++..+.+......++.+.+.+.+..-
T Consensus 21 ~~~~~~-k~~ia~~L~~~Gv~~IE~g~---p~--~--~~~~~~~~~~i~~~~~~~~v~~~~r~~~~di~~a~~~g~~~v~ 92 (382)
T 2ztj_A 21 NFSTQD-KVEIAKALDEFGIEYIEVTT---PV--A--SPQSRKDAEVLASLGLKAKVVTHIQCRLDAAKVAVETGVQGID 92 (382)
T ss_dssp CCCHHH-HHHHHHHHHHHTCSEEEECC---TT--S--CHHHHHHHHHHHTSCCSSEEEEEEESCHHHHHHHHHTTCSEEE
T ss_pred CcCHHH-HHHHHHHHHHcCcCEEEEcC---Cc--C--CHHHHHHHHHHHhcCCCcEEEEEcccChhhHHHHHHcCCCEEE
Confidence 445554 45566778899999998842 32 1 2344567777777664 44444454567788888887655322
Q ss_pred ecccccc-----cccCh------hhhHHHHHHHhC--CeEE
Q 022088 138 NQVQHSV-----VDMRP------QQKMAELCQLTG--VKLI 165 (303)
Q Consensus 138 ~q~~~n~-----l~~~~------~~~~~~~~~~~g--i~vi 165 (303)
+-...|. +.... -.+.++++++.| +.+.
T Consensus 93 i~~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~ 133 (382)
T 2ztj_A 93 LLFGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVR 133 (382)
T ss_dssp EEECC--------CCCHHHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred EEeccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 2222221 11111 246889999999 6654
No 178
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=25.04 E-value=3.5e+02 Score=25.74 Aligned_cols=84 Identities=11% Similarity=-0.130 Sum_probs=47.5
Q ss_pred ceEEEccccCCC---CCCCHHHHHHHHHHHHhhcCCCcccEEEE-ecCCCC-----CCcHHHHHHHHHHHHHcCCccEEE
Q 022088 46 SEGDLTKWVPPP---VKMTSSIVRESIDVSRRRMDVPCLDMLQF-HWWDYS-----NPGYLDALNHLTDLKEEGKIKTVA 116 (303)
Q Consensus 46 ~~~I~tK~~~~~---~~~~~~~i~~sve~SL~~Lg~d~iDl~~l-H~~~~~-----~~~~~~~~~al~~l~~~G~ir~iG 116 (303)
++.|.-|+.+.. ...+.+... .+-+.|+..|.|||++-.= +.+... .+ ....++.+.++++.=.+--++
T Consensus 208 ~~~v~vrls~~~~~~~g~~~~~~~-~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~iPvi~ 285 (671)
T 1ps9_A 208 DFIIIYRLSMLDLVEDGGTFAETV-ELAQAIEAAGATIINTGIGWHEARIPTIATPVP-RGAFSWVTRKLKGHVSLPLVT 285 (671)
T ss_dssp SSEEEEEEEEECCSTTCCCHHHHH-HHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSC-TTTTHHHHHHHTTSCSSCEEE
T ss_pred CceEEEEECccccCCCCCCHHHHH-HHHHHHHhcCCCEEEcCCCccccccccccccCC-cchHHHHHHHHHHhcCceEEE
Confidence 566777776432 245666543 3446678889888765210 011100 01 012245566666666677777
Q ss_pred ecCC-CHHHHHHHHHc
Q 022088 117 LTNF-DTERLRIILEN 131 (303)
Q Consensus 117 vS~~-~~~~l~~~~~~ 131 (303)
+... +++..+++++.
T Consensus 286 ~Ggi~~~~~a~~~l~~ 301 (671)
T 1ps9_A 286 TNRINDPQVADDILSR 301 (671)
T ss_dssp CSSCCSHHHHHHHHHT
T ss_pred eCCCCCHHHHHHHHHc
Confidence 7765 77888888776
No 179
>1adr_A P22 C2 repressor; transcription regulation; NMR {Enterobacteria phage P22} SCOP: a.35.1.2
Probab=24.99 E-value=29 Score=22.25 Aligned_cols=51 Identities=6% Similarity=-0.037 Sum_probs=23.6
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHhhCCCCceeeeccCCCCHhHHHHhHhhhc
Q 022088 219 QTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFM 269 (303)
Q Consensus 219 ~~l~~ia~~~g~s~~qlal~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~~ 269 (303)
+.++.+.++.|+|..++|-+.-++...+.-..-|-+..+.+.+...+++++
T Consensus 8 ~~l~~~r~~~gls~~~lA~~~gis~~~i~~~e~g~~~~~~~~l~~ia~~l~ 58 (76)
T 1adr_A 8 ERIRARRKKLKIRQAALGKMVGVSNVAISQWERSETEPNGENLLALSKALQ 58 (76)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHTSCHHHHHHHHTTSSCCCHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCHHHHHHHHCcCHHHHHHHHcCCCCCCHHHHHHHHHHHC
Confidence 455666666677766666544333222222222222113445555555444
No 180
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=24.90 E-value=3.2e+02 Score=23.28 Aligned_cols=109 Identities=8% Similarity=-0.052 Sum_probs=55.1
Q ss_pred CCHHHHHHHHH-HHHhhcCCCcccEEEEecCCCC----CCcH-------HHHHHHHHHHHHcCCccEEEecCCC------
Q 022088 60 MTSSIVRESID-VSRRRMDVPCLDMLQFHWWDYS----NPGY-------LDALNHLTDLKEEGKIKTVALTNFD------ 121 (303)
Q Consensus 60 ~~~~~i~~sve-~SL~~Lg~d~iDl~~lH~~~~~----~~~~-------~~~~~al~~l~~~G~ir~iGvS~~~------ 121 (303)
.+.+.++.+++ +.|+.|...-||...+-..... ..+. ...-+.+.++.++--=|++|+....
T Consensus 41 ~~~~~~~~~~~~~~l~~md~~GV~~~vl~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~p~rf~~~~~~p~~~~~~ 120 (350)
T 2gwg_A 41 ISDDELQASIIENQLKKMQERGSDLTVFSPRASFMAHHIGDFNVSSTWAAICNELCYRVSQLFPDNFIGAAMLPQSPGVD 120 (350)
T ss_dssp CCHHHHHHHHHTTHHHHHHHHTCCEEEEECCC-------CCHHHHHHHHHHHHHHHHHHHHHSTTTEEEEEECCCCTTSC
T ss_pred cCHHHhhcccHHHHHHHHHHcCCeEEEEcCCchhhccccCCHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCC
Confidence 35566777665 5555554444555544422211 0011 1234456666665333444444322
Q ss_pred ----HHHHHHHHHcCCCeeeeccccc---------ccccChhhhHHHHHHHhCCeEEeecc
Q 022088 122 ----TERLRIILENGIPVVSNQVQHS---------VVDMRPQQKMAELCQLTGVKLITYGT 169 (303)
Q Consensus 122 ----~~~l~~~~~~~~~~~~~q~~~n---------~l~~~~~~~~~~~~~~~gi~via~sp 169 (303)
.++++++.+. ..+..+.+..+ .++...-..+++.|.+.|+.|+.+..
T Consensus 121 ~~~a~~eL~r~~~~-~g~~Gv~l~~~~~~~~~~~~~l~d~~~~p~~~~a~e~~lpv~iH~~ 180 (350)
T 2gwg_A 121 PKTCIPELEKCVKE-YGFVAINLNPDPSGGHWTSPPLTDRIWYPIYEKMVELEIPAMIHVS 180 (350)
T ss_dssp GGGGHHHHHHHHHT-SCCCEEEECSCTTSSCCCSCCTTSGGGHHHHHHHHHHTCCEEECCC
T ss_pred HHHHHHHHHHHHhc-cCCeEEEECCCCCCccCCCCCCCCHHHHHHHHHHHHcCCeEEECCC
Confidence 3556666643 23444444322 12222235799999999999987754
No 181
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=24.68 E-value=3.4e+02 Score=24.24 Aligned_cols=63 Identities=8% Similarity=0.058 Sum_probs=41.1
Q ss_pred cEEEecCCCHHHHHHHHHcCCCeeeecccccccccC-hhhhHHHHHHHhCCeEEeecccccccc
Q 022088 113 KTVALTNFDTERLRIILENGIPVVSNQVQHSVVDMR-PQQKMAELCQLTGVKLITYGTVMGGLL 175 (303)
Q Consensus 113 r~iGvS~~~~~~l~~~~~~~~~~~~~q~~~n~l~~~-~~~~~~~~~~~~gi~via~spl~~G~L 175 (303)
+..-+...+.+.+++++....+..++..+.|+.-.- .-+++.+.|+++|+.++.=...+.|.+
T Consensus 148 ~~~~v~~~d~~~l~~ai~~~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~~~~~ 211 (430)
T 3ri6_A 148 EVRFVDVMDSLAVEHACDETTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMTPPYL 211 (430)
T ss_dssp EEEEECTTCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTSCTTT
T ss_pred EEEEeCCCCHHHHHHhhCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc
Confidence 333344446777777665434555666666664322 235799999999999998887776654
No 182
>2cpg_A REPA protein, transcriptional repressor COPG; DNA-binding protein, plasmid, gene regulation; 1.60A {Streptococcus agalactiae} SCOP: a.43.1.3 PDB: 1b01_A* 1ea4_A*
Probab=24.59 E-value=1e+02 Score=17.50 Aligned_cols=23 Identities=22% Similarity=0.382 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHH
Q 022088 216 VLLQTLKRIASKHGVSIPVVAVR 238 (303)
Q Consensus 216 ~~~~~l~~ia~~~g~s~~qlal~ 238 (303)
++.+.|.++|++.|+|.+++.-.
T Consensus 12 ~l~~~Ld~~a~~~g~srS~~ir~ 34 (45)
T 2cpg_A 12 SVLENLEKMAREMGLSKSAMISV 34 (45)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHCcCHHHHHHH
Confidence 44689999999999998765433
No 183
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=24.34 E-value=93 Score=24.76 Aligned_cols=66 Identities=9% Similarity=0.145 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHc-CCccEEEecCCC--HHHHHHHHHcCCCeeeecccccccccChhhhHHHHHHHhCCeEEee
Q 022088 96 YLDALNHLTDLKEE-GKIKTVALTNFD--TERLRIILENGIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITY 167 (303)
Q Consensus 96 ~~~~~~al~~l~~~-G~ir~iGvS~~~--~~~l~~~~~~~~~~~~~q~~~n~l~~~~~~~~~~~~~~~gi~via~ 167 (303)
.-+++++|.++++. ++|--+|..|.. ...+..++. . +..+..|+- ...-+..+..+++.|+.++.-
T Consensus 80 ~~Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll~--~--~i~~~~~~~--~~e~~~~i~~l~~~G~~vvVG 148 (196)
T 2q5c_A 80 RFDTMRAVYNAKRFGNELALIAYKHSIVDKHEIEAMLG--V--KIKEFLFSS--EDEITTLISKVKTENIKIVVS 148 (196)
T ss_dssp HHHHHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHHT--C--EEEEEEECS--GGGHHHHHHHHHHTTCCEEEE
T ss_pred HhHHHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHhC--C--ceEEEEeCC--HHHHHHHHHHHHHCCCeEEEC
Confidence 46899999999986 567778887754 344555543 2 333444432 233356899999999998754
No 184
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=23.91 E-value=4e+02 Score=24.05 Aligned_cols=96 Identities=9% Similarity=0.028 Sum_probs=65.8
Q ss_pred CCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEEecC--CCHHHHHHHHHcCCCeee
Q 022088 60 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTN--FDTERLRIILENGIPVVS 137 (303)
Q Consensus 60 ~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGvS~--~~~~~l~~~~~~~~~~~~ 137 (303)
++++.+...+.+.++.. ++++|-.|-+.. -|+.+.+|.++.+|-=.|=-. ++++.++++++.+ -.++
T Consensus 270 ~t~~e~~~~~~~ll~~y-----~i~~IEdPl~~d-----D~~g~~~L~~~~~ipI~gDE~~vt~~~~~~~~i~~~-a~d~ 338 (439)
T 2akz_A 270 ITGDQLGALYQDFVRDY-----PVVSIEDPFDQD-----DWAAWSKFTANVGIQIVGDDLTVTNPKRIERAVEEK-ACNC 338 (439)
T ss_dssp BCHHHHHHHHHHHHHHS-----CEEEEECCSCTT-----CHHHHHHHHHTCSSEEEESTTTTTCHHHHHHHHHTT-CCSE
T ss_pred CCHHHHHHHHHHHHHhC-----CCcEEECCCCcc-----cHHHHHHHHhCCCCEEEeCCCccCCHHHHHHHHHhC-CCCE
Confidence 36777777777777764 578888875432 267788888887776655333 4889999998863 4677
Q ss_pred eccccccccc-ChhhhHHHHHHHhCCeEEe
Q 022088 138 NQVQHSVVDM-RPQQKMAELCQLTGVKLIT 166 (303)
Q Consensus 138 ~q~~~n~l~~-~~~~~~~~~~~~~gi~via 166 (303)
+|+..|-.-- ....++..+|+++|+.++.
T Consensus 339 i~iKv~qiGGitea~~ia~lA~~~g~~~~~ 368 (439)
T 2akz_A 339 LLLKVNQIGSVTEAIQACKLAQENGWGVMV 368 (439)
T ss_dssp EEECHHHHCCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEechhhcCCHHHHHHHHHHHHHCCCeEEe
Confidence 7776554311 1134789999999998755
No 185
>3k94_A Thiamin pyrophosphokinase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.10A {Geobacillus thermodenitrificans}
Probab=23.63 E-value=1.1e+02 Score=25.05 Aligned_cols=40 Identities=15% Similarity=0.225 Sum_probs=34.2
Q ss_pred CCCHHHHHHHHHhhCCCCceeeeccCCCCHhHHHHhHhhh
Q 022088 229 GVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIF 268 (303)
Q Consensus 229 g~s~~qlal~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~ 268 (303)
.-|=.++|++|++.++.-..++.|+.-.+.+|.-.|+..+
T Consensus 77 D~TD~e~Al~~a~~~g~~~I~i~Ga~GGR~DH~lani~lL 116 (223)
T 3k94_A 77 DKTDMEIALDWAVEQTARCIRLFGATGGRLDHLFGNVELL 116 (223)
T ss_dssp TBCHHHHHHHHHHTTCCSEEEEESCSSSSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHcCCCEEEEEcCCCCchhHHHHHHHHH
Confidence 3467899999999998888889999877899999998765
No 186
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=23.53 E-value=71 Score=28.47 Aligned_cols=69 Identities=16% Similarity=0.149 Sum_probs=48.3
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHhhCCCCceeeeccCCCCHhHHHHhHhhhcC--------C--CCHHHHHHHHHHHhcCC
Q 022088 219 QTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFML--------S--LDEDDVNSIQEVTKKGK 288 (303)
Q Consensus 219 ~~l~~ia~~~g~s~~qlal~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~~~--------~--L~~e~~~~i~~~~~~~~ 288 (303)
+..+++++++|....=--+.=++..+.+..|++.+. +..|.+-.+++++. | ++.+|.++|.++.++..
T Consensus 70 ~~a~~~a~~~~~~~~y~d~~~ll~~~~vD~V~I~tp--~~~H~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g 147 (412)
T 4gqa_A 70 AMAERHAAKLGAEKAYGDWRELVNDPQVDVVDITSP--NHLHYTMAMAAIAAGKHVYCEKPLAVNEQQAQEMAQAARRAG 147 (412)
T ss_dssp HHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSC--GGGHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCeEECCHHHHhcCCCCCEEEECCC--cHHHHHHHHHHHHcCCCeEeecCCcCCHHHHHHHHHHHHHhC
Confidence 567788889987532122444677888998888887 77777766666532 4 67889999888876644
Q ss_pred C
Q 022088 289 D 289 (303)
Q Consensus 289 ~ 289 (303)
.
T Consensus 148 ~ 148 (412)
T 4gqa_A 148 V 148 (412)
T ss_dssp C
T ss_pred C
Confidence 3
No 187
>2k9i_A Plasmid PRN1, complete sequence; plasmid COPY control protein, ribbon helix helix protein, DNA binding protein; NMR {Sulfolobus islandicus} PDB: 3ft7_A
Probab=23.05 E-value=1.3e+02 Score=17.92 Aligned_cols=24 Identities=17% Similarity=0.127 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHH
Q 022088 216 VLLQTLKRIASKHGVSIPVVAVRY 239 (303)
Q Consensus 216 ~~~~~l~~ia~~~g~s~~qlal~~ 239 (303)
++.+.+..+|++.|+|.+++.-..
T Consensus 19 el~~~l~~~a~~~g~s~s~~ir~a 42 (55)
T 2k9i_A 19 EWHDRLMEIAKEKNLTLSDVCRLA 42 (55)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHH
Confidence 456899999999999988765443
No 188
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=22.97 E-value=3.8e+02 Score=23.39 Aligned_cols=82 Identities=12% Similarity=0.131 Sum_probs=55.4
Q ss_pred ccEEEEecCCCCCCcHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHHHH
Q 022088 81 LDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQ 158 (303)
Q Consensus 81 iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~~q~~~n~l~~-~~~~~~~~~~~ 158 (303)
.++.++..|-+.. .++.+.+++++-.|. ..|=+.++.++++++++. ..++++|+..+-.-- .....+...|+
T Consensus 223 ~~i~~iEqP~~~~-----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~-~~~d~v~~k~~~~GGit~~~~ia~~A~ 296 (372)
T 3tj4_A 223 LDIYWFEEPLWYD-----DVTSHARLARNTSIPIALGEQLYTVDAFRSFIDA-GAVAYVQPDVTRLGGITEYIQVADLAL 296 (372)
T ss_dssp SCEEEEESCSCTT-----CHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHT-TCCSEECCCTTTTTHHHHHHHHHHHHH
T ss_pred cCCCEEECCCCch-----hHHHHHHHHhhcCCCEEeCCCccCHHHHHHHHHc-CCCCEEEeCccccCCHHHHHHHHHHHH
Confidence 4667777764322 246677777664443 555667889999999886 357888887665311 11357899999
Q ss_pred HhCCeEEeec
Q 022088 159 LTGVKLITYG 168 (303)
Q Consensus 159 ~~gi~via~s 168 (303)
++|+.++..+
T Consensus 297 ~~gi~~~~h~ 306 (372)
T 3tj4_A 297 AHRLPVVPHA 306 (372)
T ss_dssp HTTCCBCCCC
T ss_pred HcCCEEEecC
Confidence 9999988665
No 189
>2kpj_A SOS-response transcriptional repressor, LEXA; NESG, GFT, structural genomics, PSI-2, protein structure initiative; NMR {Eubacterium rectale atcc 33656}
Probab=22.90 E-value=42 Score=22.87 Aligned_cols=53 Identities=11% Similarity=0.068 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHhhCCCCceeeeccCCCCHhHHHHhHhhhc
Q 022088 217 LLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFM 269 (303)
Q Consensus 217 ~~~~l~~ia~~~g~s~~qlal~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~~ 269 (303)
+.+.++.+.++.|+|..++|-+.-++...+.-..-|-+..+.+.+...+++++
T Consensus 10 ~~~~lk~~r~~~glsq~~lA~~~gis~~~is~~e~G~~~p~~~~l~~ia~~l~ 62 (94)
T 2kpj_A 10 FSENLNSYIAKSEKTQLEIAKSIGVSPQTFNTWCKGIAIPRMGKVQALADYFN 62 (94)
T ss_dssp HHHHHHHHHTTSSSCHHHHHHHHTCCHHHHHHHHTTSCCCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHCcCHHHHHHHHhCCCCCCHHHHHHHHHHHC
Confidence 34667777777777777776654333332222222322113455555555554
No 190
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=22.83 E-value=2.1e+02 Score=23.60 Aligned_cols=94 Identities=17% Similarity=0.230 Sum_probs=50.1
Q ss_pred HHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEEe----cCCCHHHHHHHHHc-CCCeeeecccc
Q 022088 68 SIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVAL----TNFDTERLRIILEN-GIPVVSNQVQH 142 (303)
Q Consensus 68 sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGv----S~~~~~~l~~~~~~-~~~~~~~q~~~ 142 (303)
.++..-+.||+. ++.+.-+.......++..++|.++ -|.++-+ |.+....++..... |.. .+
T Consensus 54 ~a~~~A~~LGIp---l~~v~~~g~~~~e~e~l~~~l~~~----~i~~vv~Gdi~s~yqr~r~e~vc~~~gl~------~~ 120 (237)
T 3rjz_A 54 LTDLQARALGIP---LVKGFTQGEKEKEVEDLKRVLSGL----KIQGIVAGALASKYQRKRIEKVAKELGLE------VY 120 (237)
T ss_dssp HHHHHHHHHTCC---EEEEEC------CHHHHHHHHTTS----CCSEEECC---CCSHHHHHHHHHHHTTCE------EE
T ss_pred HHHHHHHHcCCC---EEEEECCCCchHHHHHHHHHHHhc----CCcEEEECCcchHHHHHHHHHHHHHcCCE------EE
Confidence 345556888874 333332222111234444444333 2334332 33444555555543 432 33
Q ss_pred cccccChhhhHHHHHHHhCCeEEeeccccccc
Q 022088 143 SVVDMRPQQKMAELCQLTGVKLITYGTVMGGL 174 (303)
Q Consensus 143 n~l~~~~~~~~~~~~~~~gi~via~spl~~G~ 174 (303)
.++.+....+++...-+.|+..+.-+.-+.|+
T Consensus 121 ~PLW~~d~~~Ll~e~i~~G~~aiiv~v~~~gL 152 (237)
T 3rjz_A 121 TPAWGRDAKEYMRELLNLGFKIMVVGVSAYGL 152 (237)
T ss_dssp CSSSSCCHHHHHHHHHHTTCEEEEEEEESTTC
T ss_pred ccccCCCHHHHHHHHHHCCCEEEEEEEecCCC
Confidence 46665666789999999999988888777764
No 191
>3guv_A Site-specific recombinase, resolvase family prote; structural genomics, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae}
Probab=22.81 E-value=89 Score=23.86 Aligned_cols=30 Identities=13% Similarity=0.137 Sum_probs=14.1
Q ss_pred ccEEEEecCCCCCCcHHHHHHHHHHHHHcC
Q 022088 81 LDMLQFHWWDYSNPGYLDALNHLTDLKEEG 110 (303)
Q Consensus 81 iDl~~lH~~~~~~~~~~~~~~al~~l~~~G 110 (303)
+|.++++..|.......+.+..++.|.+.|
T Consensus 76 ~d~lvv~~ldRl~R~~~~~~~~~~~l~~~g 105 (167)
T 3guv_A 76 VSFVLVFKLSRFARNAADVLSTLQIMQDYG 105 (167)
T ss_dssp CSEEEESCGGGTCSSHHHHHHHHHHHHHTT
T ss_pred ccEEEEEeCchhcCCHHHHHHHHHHHHHCC
Confidence 455555554444443444444444444443
No 192
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=22.72 E-value=1.5e+02 Score=26.59 Aligned_cols=98 Identities=9% Similarity=0.051 Sum_probs=63.6
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHHcCCCeee
Q 022088 59 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVS 137 (303)
Q Consensus 59 ~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~ 137 (303)
.++.+...+-+ +.|+.+|+++ +..|-+. +-++.+.+++++-.|. ..|=+.++.+.++++++. ..+++
T Consensus 240 ~~~~~~Ai~~~-~~Le~~~i~~-----iEeP~~~-----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~li~~-~a~D~ 307 (412)
T 3stp_A 240 GWNLDYAKRML-PKLAPYEPRW-----LEEPVIA-----DDVAGYAELNAMNIVPISGGEHEFSVIGCAELINR-KAVSV 307 (412)
T ss_dssp CSCHHHHHHHH-HHHGGGCCSE-----EECCSCT-----TCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHT-TCCSE
T ss_pred CCCHHHHHHHH-HHHHhcCCCE-----EECCCCc-----ccHHHHHHHHhCCCCCEEeCCCCCCHHHHHHHHHc-CCCCE
Confidence 45666554433 3566666544 4555332 2356778888875554 444556789999999886 35788
Q ss_pred eccccccccc-ChhhhHHHHHHHhCCeEEeec
Q 022088 138 NQVQHSVVDM-RPQQKMAELCQLTGVKLITYG 168 (303)
Q Consensus 138 ~q~~~n~l~~-~~~~~~~~~~~~~gi~via~s 168 (303)
+|+..+-.-- ....++...|+++|+.++..+
T Consensus 308 v~ik~~~~GGit~a~kia~~A~a~gi~v~~h~ 339 (412)
T 3stp_A 308 LQYDTNRVGGITAAQKINAIAEAAQIPVIPHA 339 (412)
T ss_dssp ECCCHHHHTHHHHHHHHHHHHHHHTCCBCCSS
T ss_pred EecChhhcCCHHHHHHHHHHHHHcCCEEEecc
Confidence 8887655410 123578999999999998776
No 193
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=22.69 E-value=1.4e+02 Score=26.30 Aligned_cols=73 Identities=10% Similarity=-0.042 Sum_probs=47.4
Q ss_pred HHHHHHHHHcCCc-cEEEecCCCHHHHHHHHHcCCCeeeecccccccc-cChhhhHHHHHHHhCCeEEeecccccc
Q 022088 100 LNHLTDLKEEGKI-KTVALTNFDTERLRIILENGIPVVSNQVQHSVVD-MRPQQKMAELCQLTGVKLITYGTVMGG 173 (303)
Q Consensus 100 ~~al~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~~q~~~n~l~-~~~~~~~~~~~~~~gi~via~spl~~G 173 (303)
++.+.++++.-.| -..|=|.++.+.++++++. ..++++|+..+-.- -....++...|+++|+.++..+.+.+|
T Consensus 233 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~-~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es~ 307 (381)
T 3fcp_A 233 NAALVRLSQQIETAILADEAVATAYDGYQLAQQ-GFTGAYALKIAKAGGPNSVLALARVAQAAGIGLYGGTMLEGT 307 (381)
T ss_dssp HHHHHHHHHHSSSEEEESTTCCSHHHHHHHHHT-TCCSEEEECHHHHTSTTHHHHHHHHHHHHTCEEEECCSCCCH
T ss_pred HHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHc-CCCCEEEecccccCCHHHHHHHHHHHHHcCCceecCCCCccH
Confidence 4556666655333 3445566778888888776 34677777655431 122357889999999999877666443
No 194
>3f6w_A XRE-family like protein; helix-turn-helix, DNA binding protein, xenobiotic response E family of transcriptional regulators; HET: MSE BTB; 1.85A {Pseudomonas syringae PV}
Probab=22.63 E-value=45 Score=21.86 Aligned_cols=54 Identities=20% Similarity=0.018 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHhhCCCCceeeeccCCCCHhHHHHhHhhhc
Q 022088 216 VLLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFM 269 (303)
Q Consensus 216 ~~~~~l~~ia~~~g~s~~qlal~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~~ 269 (303)
.+.+.++++-++.|+|..++|-+--++...+.-..-|-+..+.+.+...+++++
T Consensus 14 ~~~~~l~~~R~~~gltq~elA~~~gis~~~is~~e~g~~~~~~~~l~~l~~~l~ 67 (83)
T 3f6w_A 14 ALLDLLLEARSAAGITQKELAARLGRPQSFVSKTENAERRLDVIEFMDFCRGIG 67 (83)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHTSCHHHHHHHHTTSSCCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHCcCHHHHHHHHCCCCCCCHHHHHHHHHHcC
Confidence 344677777888888888887765444333333333333224555666665554
No 195
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=22.61 E-value=3.2e+02 Score=22.41 Aligned_cols=18 Identities=22% Similarity=0.460 Sum_probs=14.5
Q ss_pred hhHHHHHHHhCCeEEeec
Q 022088 151 QKMAELCQLTGVKLITYG 168 (303)
Q Consensus 151 ~~~~~~~~~~gi~via~s 168 (303)
...++.|++.|+.++...
T Consensus 111 ~~~i~~A~~lG~~~v~~~ 128 (295)
T 3cqj_A 111 RKAIQFAQDVGIRVIQLA 128 (295)
T ss_dssp HHHHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHHcCCCEEEEC
Confidence 468889999999988653
No 196
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=22.42 E-value=2.1e+02 Score=24.28 Aligned_cols=34 Identities=12% Similarity=0.136 Sum_probs=23.6
Q ss_pred HHHHHH-HHHHHcCCccEEEecCCCHHHHHHHHHc
Q 022088 98 DALNHL-TDLKEEGKIKTVALTNFDTERLRIILEN 131 (303)
Q Consensus 98 ~~~~al-~~l~~~G~ir~iGvS~~~~~~l~~~~~~ 131 (303)
+..+.+ +.+++.|.-..+=+++|+...+..+.+.
T Consensus 165 ~~~~~v~~~l~~~~~~~~v~i~SF~~~~l~~~~~~ 199 (313)
T 3l12_A 165 EMVAAVLADVRRYRMEPRTVMHSFDWALLGECRRQ 199 (313)
T ss_dssp HHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCEEEEcCCHHHHHHHHHH
Confidence 344433 3445567777888999999988888764
No 197
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=22.39 E-value=3.3e+02 Score=25.58 Aligned_cols=145 Identities=11% Similarity=0.036 Sum_probs=80.0
Q ss_pred HHHHHHHcCCceee----hHhHHHHH---HHhccCCCCccc---eEEEcccc----CCC------CCC------------
Q 022088 13 LLTWLIYMGLLKIS----MASSSIEF---VERGHQSSWIRS---EGDLTKWV----PPP------VKM------------ 60 (303)
Q Consensus 13 lv~~Al~~Gi~~~D----tA~~y~~~---~~~~~~~~~r~~---~~I~tK~~----~~~------~~~------------ 60 (303)
.+....+.|++++- |.|.++.. ++....++.+.. ..++|-.. ++. -+.
T Consensus 257 ~~~~~~~~G~~iiGGCCGTtP~hI~aia~~~~~~~p~~~~~~~~~~~~s~~~~~~~~~~~iiGer~N~Tg~dsf~~~~~~ 336 (566)
T 1q7z_A 257 HIDSYYELGVNIFGGCCGTTPEHVKLFRKVLGNRKPLQRKKKRIFAVSSPSKLVTFDHFVVIGERINPAGRKKLWAEMQK 336 (566)
T ss_dssp THHHHHHTTCSEECCCTTCCHHHHHHHHHHHCSCCCCCCCCCCCCEEECSSCEEESSSCEEEEEEECCTTCHHHHHHHHT
T ss_pred HHHHHHHcCCcEEccccCCCHHHHHHHHHHhcCCCCCCcccCccceecCCceeeccccceEEEEEecCCCChhHHHHhhc
Confidence 35567788999997 88888765 344333222111 22333110 000 011
Q ss_pred -CHHHHHHHHHHHHhhcCCCcccEEEEecCCCC-CCcHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHc--CCCee
Q 022088 61 -TSSIVRESIDVSRRRMDVPCLDMLQFHWWDYS-NPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN--GIPVV 136 (303)
Q Consensus 61 -~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~-~~~~~~~~~al~~l~~~G~ir~iGvS~~~~~~l~~~~~~--~~~~~ 136 (303)
+.+.+.+..++. ..-|-|.||+= |+.. ....++.-+.+..+++.-. --+-|-+++++.++++++. |.++
T Consensus 337 ~~~~~a~~~A~~~-v~~GAdiIDIg----pg~~~v~~~ee~~rvv~~i~~~~~-vpisIDT~~~~v~eaal~~~~G~~i- 409 (566)
T 1q7z_A 337 GNEEIVIKEAKTQ-VEKGAEVLDVN----FGIESQIDVRYVEKIVQTLPYVSN-VPLSLDIQNVDLTERALRAYPGRSL- 409 (566)
T ss_dssp TCCHHHHHHHHHH-HHTTCSEEEEE----CSSGGGSCHHHHHHHHHHHHHHTC-SCEEEECCCHHHHHHHHHHCSSCCE-
T ss_pred CCHHHHHHHHHHH-HHCCCCEEEEC----CCCCCCCHHHHHHHHHHHHHhhCC-ceEEEeCCCHHHHHHHHHhcCCCCE-
Confidence 233344433333 36799999998 3321 1212333333333333311 2477888999999999987 5432
Q ss_pred eecccccccccChh--hhHHHHHHHhCCeEEeecc
Q 022088 137 SNQVQHSVVDMRPQ--QKMAELCQLTGVKLITYGT 169 (303)
Q Consensus 137 ~~q~~~n~l~~~~~--~~~~~~~~~~gi~via~sp 169 (303)
+|-+ |..+ + .++++.+++.|..++.+..
T Consensus 410 INdi--s~~~---~~~~~~~~~~~~~g~~vV~m~~ 439 (566)
T 1q7z_A 410 FNSA--KVDE---EELEMKINLLKKYGGTLIVLLM 439 (566)
T ss_dssp EEEE--ESCH---HHHHHHHHHHHHHCCEEEEESC
T ss_pred EEEC--Ccch---hhHHHHHHHHHHhCCeEEEEeC
Confidence 2222 2221 3 5789999999999998763
No 198
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=22.25 E-value=89 Score=25.87 Aligned_cols=70 Identities=9% Similarity=-0.077 Sum_probs=49.0
Q ss_pred HHHHHHHHcCCceeehHhHHHHHHHhccCCCCccceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEE
Q 022088 12 PLLTWLIYMGLLKISMASSSIEFVERGHQSSWIRSEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQ 85 (303)
Q Consensus 12 ~lv~~Al~~Gi~~~DtA~~y~~~~~~~~~~~~r~~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iDl~~ 85 (303)
.+++.|.+.|+.-+-.-+.|+ .......... .+-|+|-++.+.+..+.+.....+++.++ +|-|-||++.
T Consensus 40 ~l~~~a~~~~~~aVcv~p~~v-~a~~~l~~~~--~v~v~tvigFP~G~~~~~~k~~e~~~Av~-~GAdEID~vi 109 (234)
T 1n7k_A 40 NLVREASDYGFRCAVLTPVYT-VKISGLAEKL--GVKLCSVIGFPLGQAPLEVKLVEAQTVLE-AGATELDVVP 109 (234)
T ss_dssp HHHHHHHHHTCSEEEECHHHH-HHHHHHHHHH--TCCEEEEESTTTCCSCHHHHHHHHHHHHH-HTCCEEEECC
T ss_pred HHHHHHHHhCCCEEEEchHHh-eeehHhCCCC--CceEEEEeCCCCCCCcHHHHHHHHHHHHH-cCCCEEEEec
Confidence 578889999988887777777 5432211000 35677777766555677777788888877 7999999974
No 199
>3v5c_A Mandelate racemase/muconate lactonizing protein; enolase fold, galacturonate dehydratase, double Mg site, LYA; 1.53A {Paenibacillus SP} PDB: 3v5f_A* 3p3b_A* 3ops_A* 3n4f_A* 3qpe_A*
Probab=22.25 E-value=1e+02 Score=27.50 Aligned_cols=80 Identities=11% Similarity=-0.124 Sum_probs=52.7
Q ss_pred cccEEEEecCCCCCCcHHHHHHHHHHHHH------cCCccEEEecCCCHHHHHHHHHcCCCeeeecccccccccCh--hh
Q 022088 80 CLDMLQFHWWDYSNPGYLDALNHLTDLKE------EGKIKTVALTNFDTERLRIILENGIPVVSNQVQHSVVDMRP--QQ 151 (303)
Q Consensus 80 ~iDl~~lH~~~~~~~~~~~~~~al~~l~~------~G~ir~iGvS~~~~~~l~~~~~~~~~~~~~q~~~n~l~~~~--~~ 151 (303)
-+++.++-.|-+ ++. +.+.++++ .+-.-+.|=+.+ .+.+.++++. -.++++|+..+- -.. ..
T Consensus 226 ~~~l~~iEeP~~--~d~----~~~~~l~~~~~~~~~~ipIa~gE~~~-~~~~~~li~~-~a~dii~~d~~~--GGitea~ 295 (392)
T 3v5c_A 226 DVNLYWLEAAFH--EDE----ALYEDLKEWLGQRGQNVLIADGEGLA-SPHLIEWATR-GRVDVLQYDIIW--PGFTHWM 295 (392)
T ss_dssp TSCCCEEECSSS--CCH----HHHHHHHHHHHHHTCCCEEEECCSSC-CTTHHHHHHT-TSCCEECCBTTT--BCHHHHH
T ss_pred cCCCeEEeCCCC--cCH----HHHHHHHHhhccCCCCCcEECCCccc-HHHHHHHHHc-CCCcEEEeCCCC--CCHHHHH
Confidence 357788888754 222 33445544 244456666767 6777888776 357888888763 122 34
Q ss_pred hHHHHHHHhCCeEEeecc
Q 022088 152 KMAELCQLTGVKLITYGT 169 (303)
Q Consensus 152 ~~~~~~~~~gi~via~sp 169 (303)
.+...|+++|+.++..++
T Consensus 296 kia~~A~~~gv~~~~h~~ 313 (392)
T 3v5c_A 296 ELGEKLDAHGLRSAPHCY 313 (392)
T ss_dssp HHHHHHHHTTCEECCBCC
T ss_pred HHHHHHHHcCCeEEecCC
Confidence 688999999999987764
No 200
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=22.06 E-value=3.8e+02 Score=23.06 Aligned_cols=97 Identities=8% Similarity=0.025 Sum_probs=54.7
Q ss_pred HHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHc-CCccEEEecCCCHHHHHHHHHc----CCCeeeecc
Q 022088 66 RESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEE-GKIKTVALTNFDTERLRIILEN----GIPVVSNQV 140 (303)
Q Consensus 66 ~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~-G~ir~iGvS~~~~~~l~~~~~~----~~~~~~~q~ 140 (303)
+-.+-+.|.++|+++|++-+ |.. . +.-++.+.++.+. ..++..+++......++.+.+. +.+...+-.
T Consensus 30 Kl~ia~~L~~~Gv~~IE~g~---p~~-~---~~d~e~v~~i~~~~~~~~i~~l~r~~~~~i~~a~~al~~ag~~~v~i~~ 102 (325)
T 3eeg_A 30 KIIVAKALDELGVDVIEAGF---PVS-S---PGDFNSVVEITKAVTRPTICALTRAKEADINIAGEALRFAKRSRIHTGI 102 (325)
T ss_dssp HHHHHHHHHHHTCSEEEEEC---TTS-C---HHHHHHHHHHHHHCCSSEEEEECCSCHHHHHHHHHHHTTCSSEEEEEEE
T ss_pred HHHHHHHHHHcCCCEEEEeC---CCC-C---HhHHHHHHHHHHhCCCCEEEEeecCCHHHHHHHHHhhcccCCCEEEEEe
Confidence 34455568999999999863 321 1 2345566666654 3467777766667777766665 432211111
Q ss_pred ccccc------ccCh------hhhHHHHHHHhCCeEEeecc
Q 022088 141 QHSVV------DMRP------QQKMAELCQLTGVKLITYGT 169 (303)
Q Consensus 141 ~~n~l------~~~~------~~~~~~~~~~~gi~via~sp 169 (303)
.-|-. +... -.+.++++++.|+.+.-..|
T Consensus 103 s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~ 143 (325)
T 3eeg_A 103 GSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCE 143 (325)
T ss_dssp ECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEE
T ss_pred cccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEcc
Confidence 11111 1111 24688999999988754333
No 201
>2c35_A Human RPB4, DNA-directed RNA polymerase II 16 kDa polypeptide; transcription, nucleotidyltransferase; 2.70A {Homo sapiens} SCOP: a.60.8.2
Probab=21.89 E-value=2.7e+02 Score=21.21 Aligned_cols=60 Identities=7% Similarity=0.110 Sum_probs=44.0
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHhhCCCCceeeeccCCCCHhHHHHhHhhhcCCCCHHHHHHHHHHHhcCCCC
Q 022088 219 QTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFMLSLDEDDVNSIQEVTKKGKDL 290 (303)
Q Consensus 219 ~~l~~ia~~~g~s~~qlal~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~~~~L~~e~~~~i~~~~~~~~~~ 290 (303)
..+.+...+++++..++|.= .+ ..+. ++++++..+..++.++++++++.|-....+.+.+
T Consensus 91 ~~l~e~L~~~~L~~~E~a~L--~N--------L~P~--t~dEar~lipsl~~r~sdEeLe~ILd~l~k~r~f 150 (152)
T 2c35_A 91 ASVRSLLLQKKLHKFELACL--AN--------LCPE--TAEESKALIPSLEGRFEDEELQQILDDIQTKRSF 150 (152)
T ss_dssp HHHHHHHHTSSCCHHHHHHH--HH--------HCCS--SHHHHHHHCGGGTTTSCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHhcCCCHHHHHHh--cc--------CCCC--CHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHhh
Confidence 44555556788887775532 11 1245 8999999999998899999999999888876654
No 202
>3t76_A VANU, transcriptional regulator vanug; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.12A {Enterococcus faecalis} PDB: 3t75_A* 3tyr_A* 3tys_A*
Probab=21.65 E-value=38 Score=23.22 Aligned_cols=21 Identities=5% Similarity=-0.018 Sum_probs=15.3
Q ss_pred HHHHHHHHHhCCCHHHHHHHH
Q 022088 219 QTLKRIASKHGVSIPVVAVRY 239 (303)
Q Consensus 219 ~~l~~ia~~~g~s~~qlal~~ 239 (303)
+.|+++.++.|+|..++|-+-
T Consensus 27 ~rLk~lR~~~glTq~eLA~~~ 47 (88)
T 3t76_A 27 NKLWKLLIDRDMKKGELREAV 47 (88)
T ss_dssp HHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHH
Confidence 567777778888887777553
No 203
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=21.65 E-value=3.2e+02 Score=21.97 Aligned_cols=52 Identities=10% Similarity=-0.126 Sum_probs=28.5
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEEEe
Q 022088 59 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVAL 117 (303)
Q Consensus 59 ~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iGv 117 (303)
+.+++. .+.+.+.+++.|+. +..+|.+.. ...+..-+.++.+.+-|- +++.+
T Consensus 57 ~~~~~~-~~~~~~~l~~~gl~---i~~~~~~~~--~~~~~~~~~i~~A~~lGa-~~v~~ 108 (257)
T 3lmz_A 57 NSTDEQ-IRAFHDKCAAHKVT---GYAVGPIYM--KSEEEIDRAFDYAKRVGV-KLIVG 108 (257)
T ss_dssp TCCHHH-HHHHHHHHHHTTCE---EEEEEEEEE--CSHHHHHHHHHHHHHHTC-SEEEE
T ss_pred CCCHHH-HHHHHHHHHHcCCe---EEEEecccc--CCHHHHHHHHHHHHHhCC-CEEEe
Confidence 334443 45677888888864 344454322 224555566666666663 34433
No 204
>3lm8_A Thiamine pyrophosphokinase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: VIB; 2.60A {Bacillus subtilis}
Probab=21.59 E-value=96 Score=25.34 Aligned_cols=40 Identities=15% Similarity=0.221 Sum_probs=33.7
Q ss_pred CCCHHHHHHHHHhhCCCCceeeeccCCCCHhHHHHhHhhh
Q 022088 229 GVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIF 268 (303)
Q Consensus 229 g~s~~qlal~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~ 268 (303)
.-|-.++|++|++.++.-..++.|+.-.+.+|.-.|+..+
T Consensus 78 D~TD~e~Al~~a~~~g~~~I~i~Ga~GgR~DH~lani~ll 117 (222)
T 3lm8_A 78 DQTDLDLALDWALEKQPDIIQIFGITGGRADHFLGNIQLL 117 (222)
T ss_dssp SSCHHHHHHHHHHHHCCSEEEEESCCCSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHcCCCEEEEEcCCCCchhHHHHHHHHH
Confidence 3577889999999988778889999877899988888765
No 205
>2keb_A DNA polymerase subunit alpha B; DNA polymerase alpha, DNA replication, nucleus, phosphoprote binding protein; HET: DNA; NMR {Homo sapiens}
Probab=21.47 E-value=2e+02 Score=20.35 Aligned_cols=26 Identities=15% Similarity=0.183 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHh
Q 022088 216 VLLQTLKRIASKHGVSIPVVAVRYIL 241 (303)
Q Consensus 216 ~~~~~l~~ia~~~g~s~~qlal~~~l 241 (303)
+.++++.++|..|++++.+++-.|+-
T Consensus 45 ~VldKc~ELC~~y~lda~e~VeeWmA 70 (101)
T 2keb_A 45 ALIEKLVELCVQYGQNEEGMVGELIA 70 (101)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 56799999999999998888776653
No 206
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=21.31 E-value=2.6e+02 Score=24.51 Aligned_cols=138 Identities=7% Similarity=-0.111 Sum_probs=78.1
Q ss_pred HHHHHHHcCCceeehH-h----HH-HH--HHHhccCCCCccceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCcccEE
Q 022088 13 LLTWLIYMGLLKISMA-S----SS-IE--FVERGHQSSWIRSEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDML 84 (303)
Q Consensus 13 lv~~Al~~Gi~~~DtA-~----~y-~~--~~~~~~~~~~r~~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iDl~ 84 (303)
.++.+.+.|++.|..- + .. .. +..++..+. ++-|.-+.. . .++.+.. .+-+++|. .++
T Consensus 152 ~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~g~---~~~l~vDan-~--~~~~~~a----~~~~~~l~---~~i- 217 (378)
T 2qdd_A 152 LIAEAAAQGYRTHSAKIGGSDPAQDIARIEAISAGLPD---GHRVTFDVN-R--AWTPAIA----VEVLNSVR---ARD- 217 (378)
T ss_dssp HHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHHSCCT---TCEEEEECT-T--CCCHHHH----HHHHTSCC---CCC-
T ss_pred HHHHHHHHhhhheeecCCCCChHHHHHHHHHHHHHhCC---CCEEEEeCC-C--CCCHHHH----HHHHHHhC---CCc-
Confidence 4555677888877641 1 11 11 122222211 344444442 2 4455432 33455553 466
Q ss_pred EEecCCCCCCcHHHHHHHHHHHHHcCCccEEE-ecCCCHHHHHHHHHcCCCeeeeccccccccc-ChhhhHHHHHHHhCC
Q 022088 85 QFHWWDYSNPGYLDALNHLTDLKEEGKIKTVA-LTNFDTERLRIILENGIPVVSNQVQHSVVDM-RPQQKMAELCQLTGV 162 (303)
Q Consensus 85 ~lH~~~~~~~~~~~~~~al~~l~~~G~ir~iG-vS~~~~~~l~~~~~~~~~~~~~q~~~n~l~~-~~~~~~~~~~~~~gi 162 (303)
++..|-+ .++.+.++++.-.|-=.+ =+.++++.++++++. ...+++|+..+..-- ..-.++...|+++|+
T Consensus 218 ~iEqP~~-------d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~-~~~d~v~ik~~~~GGi~~~~~i~~~A~~~g~ 289 (378)
T 2qdd_A 218 WIEQPCQ-------TLDQCAHVARRVANPIMLDECLHEFSDHLAAWSR-GACEGVKIKPNRVGGLTRARQIRDFGVSVGW 289 (378)
T ss_dssp EEECCSS-------SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHH-TCCSEEEECHHHHTSHHHHHHHHHHHHHHTC
T ss_pred EEEcCCC-------CHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHh-CCCCEEEecccccCCHHHHHHHHHHHHHcCC
Confidence 6766532 356777787765554443 344678889888876 347777776654311 123478999999999
Q ss_pred eEEeeccccc
Q 022088 163 KLITYGTVMG 172 (303)
Q Consensus 163 ~via~spl~~ 172 (303)
.++..+.+..
T Consensus 290 ~~~~~~~~es 299 (378)
T 2qdd_A 290 QMHIEDVGGT 299 (378)
T ss_dssp EEEECCSSCC
T ss_pred eEEecCCCCc
Confidence 9998854444
No 207
>2k9q_A Uncharacterized protein; all helix, helix-turn-helix, plasmid, structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=21.24 E-value=27 Score=22.75 Aligned_cols=52 Identities=8% Similarity=-0.097 Sum_probs=24.5
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHhhCCCCceeeeccCCCCHhHHHHhHhhhcC
Q 022088 219 QTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFML 270 (303)
Q Consensus 219 ~~l~~ia~~~g~s~~qlal~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~~~ 270 (303)
+.++++.++.|+|..++|-+--++...+.-..-|-+..+.+.+...+++++.
T Consensus 5 ~~lk~~r~~~glsq~~lA~~~gis~~~i~~~e~g~~~p~~~~l~~ia~~l~v 56 (77)
T 2k9q_A 5 NELKVERIRLSLTAKSVAEEMGISRQQLCNIEQSETAPVVVKYIAFLRSKGV 56 (77)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHTSCHHHHHHHHTCCSCCHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCHHHHHHHhCCCHHHHHHHHcCCCCCCHHHHHHHHHHhCc
Confidence 4455555556666665555443333322222223321134566666666543
No 208
>2xi8_A Putative transcription regulator; HTH DNA-binding motif; HET: GOL; 1.21A {Enterococcus faecalis} PDB: 2gzu_A 1utx_A* 2xj3_A 2xiu_A
Probab=21.09 E-value=29 Score=21.45 Aligned_cols=17 Identities=29% Similarity=0.223 Sum_probs=7.7
Q ss_pred HHHHHHhCCCHHHHHHH
Q 022088 222 KRIASKHGVSIPVVAVR 238 (303)
Q Consensus 222 ~~ia~~~g~s~~qlal~ 238 (303)
+.+..+.|+|..++|-+
T Consensus 7 ~~~r~~~g~s~~~lA~~ 23 (66)
T 2xi8_A 7 KLIREKKKISQSELAAL 23 (66)
T ss_dssp HHHHHHTTCCHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHH
Confidence 33344445555544433
No 209
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=21.04 E-value=90 Score=27.67 Aligned_cols=98 Identities=8% Similarity=-0.099 Sum_probs=61.3
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCccEE-EecCCCHHHHHHHHHcCCCeee
Q 022088 59 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTV-ALTNFDTERLRIILENGIPVVS 137 (303)
Q Consensus 59 ~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir~i-GvS~~~~~~l~~~~~~~~~~~~ 137 (303)
.++.+...+-++. |+.++ ++.++..|-+. +.++.+.++++.-.|-=. |=+.++++.++++++. ...++
T Consensus 194 ~~~~~~a~~~~~~-l~~~~----~i~~iEqP~~~-----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~-~~~d~ 262 (382)
T 2gdq_A 194 SYDAAAAFKWERY-FSEWT----NIGWLEEPLPF-----DQPQDYAMLRSRLSVPVAGGENMKGPAQYVPLLSQ-RCLDI 262 (382)
T ss_dssp CCCHHHHHTTHHH-HTTCS----CEEEEECCSCS-----SCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHT-TCCSE
T ss_pred CCCHHHHHHHHHH-Hhhcc----CCeEEECCCCc-----ccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHc-CCCCE
Confidence 4566665544443 55540 44566666432 235667777776555433 3445678999999886 35788
Q ss_pred eccccccccc-ChhhhHHHHHHHhCCeEEee
Q 022088 138 NQVQHSVVDM-RPQQKMAELCQLTGVKLITY 167 (303)
Q Consensus 138 ~q~~~n~l~~-~~~~~~~~~~~~~gi~via~ 167 (303)
+|+..+-.-- ....++...|+++|+.++..
T Consensus 263 v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~ 293 (382)
T 2gdq_A 263 IQPDVMHVNGIDEFRDCLQLARYFGVRASAH 293 (382)
T ss_dssp ECCCTTTTTHHHHHHHHHHHHHHHTCEECCC
T ss_pred EecCccccCCHHHHHHHHHHHHHcCCEEeec
Confidence 8887654311 11357899999999998877
No 210
>3qq6_A HTH-type transcriptional regulator SINR; helix-turn-helix motif, biofilm, repressor, SINI; 1.90A {Bacillus subtilis}
Probab=21.00 E-value=29 Score=22.88 Aligned_cols=51 Identities=12% Similarity=0.129 Sum_probs=25.0
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHhhCCCCceeeec-cCCCCHhHHHHhHhhhc
Q 022088 219 QTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIG-VRLGLAEHIQDTNAIFM 269 (303)
Q Consensus 219 ~~l~~ia~~~g~s~~qlal~~~l~~~~v~~vi~G-~~~~~~~~l~en~~a~~ 269 (303)
+.++.+-++.|+|..++|-+--++...+.-+.-| -+..+.+.+...+++++
T Consensus 13 ~~ik~~R~~~gltq~elA~~~gis~~~is~~E~G~~~~p~~~~l~~ia~~l~ 64 (78)
T 3qq6_A 13 QRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLD 64 (78)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHTTSCCCCBHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCHHHHHHHHCcCHHHHHHHHcCCCCCCCHHHHHHHHHHHC
Confidence 5666666677777777665543333322222223 22113445555555544
No 211
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=20.99 E-value=1.7e+02 Score=26.06 Aligned_cols=100 Identities=11% Similarity=0.095 Sum_probs=63.9
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHHcCCCeee
Q 022088 59 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIK-TVALTNFDTERLRIILENGIPVVS 137 (303)
Q Consensus 59 ~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~ 137 (303)
.++.+...+-+ +.|+.+|+++ +..|-+. +.++.+.++++.-.|- ..|=+.++.++++++++. ..+++
T Consensus 211 ~~~~~~A~~~~-~~L~~~~i~~-----iEqP~~~-----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~-~~~d~ 278 (401)
T 3sbf_A 211 RLFPNQAIQFA-KEVEQYKPYF-----IEDILPP-----NQTEWLDNIRSQSSVSLGLGELFNNPEEWKSLIAN-RRIDF 278 (401)
T ss_dssp CSCHHHHHHHH-HHHGGGCCSC-----EECSSCT-----TCGGGHHHHHTTCCCCEEECTTCCSHHHHHHHHHT-TCCSE
T ss_pred CCCHHHHHHHH-HHHHhcCCCE-----EECCCCh-----hHHHHHHHHHhhCCCCEEeCCccCCHHHHHHHHhc-CCCCE
Confidence 45665554433 3567776655 4555332 1235577777765543 445566789999999886 35788
Q ss_pred eccccccccc-ChhhhHHHHHHHhCCeEEeeccc
Q 022088 138 NQVQHSVVDM-RPQQKMAELCQLTGVKLITYGTV 170 (303)
Q Consensus 138 ~q~~~n~l~~-~~~~~~~~~~~~~gi~via~spl 170 (303)
+|+..+-.-- ....++...|+.+|+.++.+++.
T Consensus 279 v~~k~~~~GGit~~~kia~~A~~~gi~~~~h~~~ 312 (401)
T 3sbf_A 279 IRCHVSQIGGITPALKLGHLCQNFGVRIAWHCAP 312 (401)
T ss_dssp ECCCGGGGTSHHHHHHHHHHHHHHTCEECCCCCT
T ss_pred EecCccccCCHHHHHHHHHHHHHcCCEEEecCCc
Confidence 8887665421 12356899999999999877763
No 212
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=20.99 E-value=1.1e+02 Score=24.98 Aligned_cols=68 Identities=12% Similarity=0.053 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHc-CCccEEEecCCCHHHHHHHHHc-CCCeeeecccccccccChhhhHHHHHHHhCCeEEeec
Q 022088 96 YLDALNHLTDLKEE-GKIKTVALTNFDTERLRIILEN-GIPVVSNQVQHSVVDMRPQQKMAELCQLTGVKLITYG 168 (303)
Q Consensus 96 ~~~~~~al~~l~~~-G~ir~iGvS~~~~~~l~~~~~~-~~~~~~~q~~~n~l~~~~~~~~~~~~~~~gi~via~s 168 (303)
.-+++++|.++++. ++|--+|..|.... +..+.+. +.+ ..+..|+- ...-+..+..+++.|+.++.-.
T Consensus 92 ~~Dil~aL~~a~~~~~kIavVg~~~~~~~-~~~i~~ll~~~--i~~~~~~~--~ee~~~~i~~l~~~G~~vVVG~ 161 (225)
T 2pju_A 92 GYDVLQFLAKAGKLTSSIGVVTYQETIPA-LVAFQKTFNLR--LDQRSYIT--EEDARGQINELKANGTEAVVGA 161 (225)
T ss_dssp HHHHHHHHHHTTCTTSCEEEEEESSCCHH-HHHHHHHHTCC--EEEEEESS--HHHHHHHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHHHHHhhCCcEEEEeCchhhhH-HHHHHHHhCCc--eEEEEeCC--HHHHHHHHHHHHHCCCCEEECC
Confidence 45899999999875 66888888887653 2333332 333 33333332 2223578999999999987543
No 213
>3cq9_A Uncharacterized protein LP_1622; Q88WK7_lacpl, transferase, thiamine pyrophosphokinase, NESG, LPR114, structural genomics, PSI-2; 2.20A {Lactobacillus plantarum WCFS1}
Probab=20.93 E-value=1.1e+02 Score=25.19 Aligned_cols=41 Identities=15% Similarity=0.193 Sum_probs=33.9
Q ss_pred CCCHHHHHHHHHhhCCCC-ceeeeccCCCCHhHHHHhHhhhc
Q 022088 229 GVSIPVVAVRYILDQPAV-AGSMIGVRLGLAEHIQDTNAIFM 269 (303)
Q Consensus 229 g~s~~qlal~~~l~~~~v-~~vi~G~~~~~~~~l~en~~a~~ 269 (303)
.-|-.++|++++..++.. ..+++|+.-.+.+|.-.|+..+-
T Consensus 77 D~TD~e~Al~~a~~~~~~~~I~i~Ga~GgR~DH~laNi~lL~ 118 (227)
T 3cq9_A 77 DHTDTQLAIKSIFEQLQPDEVHLYGATGGRLDHLLANMWLVL 118 (227)
T ss_dssp SSCHHHHHHHHHHHHTCCSEEEEESCSSSCHHHHHHHHSGGG
T ss_pred CCCHHHHHHHHHHHhCCCceEEEEcCCCCchhHHHHHHHHHH
Confidence 457789999999998765 67788998888999999987653
No 214
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=20.89 E-value=2e+02 Score=24.69 Aligned_cols=73 Identities=10% Similarity=-0.008 Sum_probs=52.1
Q ss_pred HHHHHHH-HcCCceeehHhHHHHHHHhccCCC--CccceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEE
Q 022088 12 PLLTWLI-YMGLLKISMASSSIEFVERGHQSS--WIRSEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQ 85 (303)
Q Consensus 12 ~lv~~Al-~~Gi~~~DtA~~y~~~~~~~~~~~--~r~~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iDl~~ 85 (303)
.+.+.|. +.|+.-+-+-|.|+..+....... .-.++-|+|=++.+.+..+.+.-....+..++. |-|-||+++
T Consensus 46 ~lc~eA~~~~~~aaVCV~P~~V~~a~~~L~~~~~~~s~v~V~tVigFP~G~~~~e~K~~Ea~~Av~~-GAdEIDmVi 121 (297)
T 4eiv_A 46 AVCKIAAKDPAIVGVSVRPAFVRFIRQELVKSAPEVAGIKVCAAVNFPEGTGTPDTVSLEAVGALKD-GADEIECLI 121 (297)
T ss_dssp HHHHHHHSSSCCSEEEECGGGHHHHHHTGGGTCGGGGGSEEEEEESTTTCCCCHHHHHHHHHHHHHT-TCSEEEEEC
T ss_pred HHHHHHHhhcCcEEEEECHHHHHHHHHHhcccCcCCCCCeEEEEecCCCCCCCHHHHHHHHHHHHHc-CCCEEEeee
Confidence 4677888 778777777788877654332110 002688888888877777777777788888886 999999983
No 215
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=20.84 E-value=4.7e+02 Score=23.60 Aligned_cols=101 Identities=10% Similarity=0.067 Sum_probs=58.0
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCC-ccEEEecCCCHHHHHHHHHcCCCeee
Q 022088 59 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGK-IKTVALTNFDTERLRIILENGIPVVS 137 (303)
Q Consensus 59 ~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~-ir~iGvS~~~~~~l~~~~~~~~~~~~ 137 (303)
.++.+.-. .+-+.|.++|+++|.+= +|.. .++-++..+.+.+.|+ .+-++.+..+...++.+.+.+.+...
T Consensus 57 ~~s~eeKl-~Ia~~L~~~Gv~~IEvG---~P~a----sp~d~~~~~~i~~~~~~~~v~~~~r~~~~di~~A~~aG~~~V~ 128 (423)
T 3ivs_A 57 FFDTEKKI-QIAKALDNFGVDYIELT---SPVA----SEQSRQDCEAICKLGLKCKILTHIRCHMDDARVAVETGVDGVD 128 (423)
T ss_dssp CCCHHHHH-HHHHHHHHHTCSEEEEC---CTTS----CHHHHHHHHHHHTSCCSSEEEEEEESCHHHHHHHHHTTCSEEE
T ss_pred CcCHHHHH-HHHHHHHHcCCCEEEEe---eccc----CHHHHHHHHHHHhcCCCCEEEEeeccChhhHHHHHHcCCCEEE
Confidence 45656544 45556999999998874 3432 1344556667776664 33344445667788888887654222
Q ss_pred ecc-------cccccccCh------hhhHHHHHHHhCCeEEeec
Q 022088 138 NQV-------QHSVVDMRP------QQKMAELCQLTGVKLITYG 168 (303)
Q Consensus 138 ~q~-------~~n~l~~~~------~~~~~~~~~~~gi~via~s 168 (303)
+-+ .+++ +... -.+.+++++++|+.+..+.
T Consensus 129 i~~s~Sd~~~~~~l-~~s~~e~l~~~~~~v~~ak~~G~~V~~~~ 171 (423)
T 3ivs_A 129 VVIGTSQYLRKYSH-GKDMTYIIDSATEVINFVKSKGIEVRFSS 171 (423)
T ss_dssp EEEEC--------------CHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred EEeeccHHHHHHHc-CCCHHHHHHHHHHHHHHHHHCCCEEEEEE
Confidence 221 1222 1111 1357889999998876543
No 216
>2omk_A Hypothetical protein; succinimide, thiamin pyrophosphokinase, structural genomics, protein structure initiative; 1.80A {Bacteroides thetaiotaomicron}
Probab=20.57 E-value=1.5e+02 Score=24.36 Aligned_cols=40 Identities=13% Similarity=0.154 Sum_probs=34.3
Q ss_pred CCCHHHHHHHHHhhCCCCceeeeccCCCCHhHHHHhHhhh
Q 022088 229 GVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIF 268 (303)
Q Consensus 229 g~s~~qlal~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~ 268 (303)
+-|-.++|+.++..++.-..+++|+.-.+.+|.-.|+..+
T Consensus 104 D~TD~e~Al~~a~~~g~~~I~i~Ga~GgRlDH~laNi~lL 143 (231)
T 2omk_A 104 ETNDQTKAVHYLQSKGIRKIAIVGATGKREDHTLGNISLL 143 (231)
T ss_dssp CCCHHHHHHHHHHHTTCCEEEEESCSSSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHcCCCEEEEECccCCchhHHHHHHHHH
Confidence 5678899999999998777889999888899999998765
No 217
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=20.53 E-value=1.7e+02 Score=24.87 Aligned_cols=93 Identities=8% Similarity=-0.125 Sum_probs=60.4
Q ss_pred HHHHHHHHc--CCceeehHhHHHHHH---Hhc-cCCCCccceEEEccccCCCCCCCHHHHHHHHHHHHhhcCCCcccEEE
Q 022088 12 PLLTWLIYM--GLLKISMASSSIEFV---ERG-HQSSWIRSEGDLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQ 85 (303)
Q Consensus 12 ~lv~~Al~~--Gi~~~DtA~~y~~~~---~~~-~~~~~r~~~~I~tK~~~~~~~~~~~~i~~sve~SL~~Lg~d~iDl~~ 85 (303)
.+++.|.+. |+.-+-+-+.|+..+ +.. +.+. .+-|+|-++.+.+..+.+.....+++.++ +|-|-||+++
T Consensus 52 ~lc~eA~~~~~~~aaVCV~p~~V~~a~~~L~~~gs~~---~v~v~tVigFP~G~~~~~~Kv~E~~~Av~-~GAdEIDmVi 127 (281)
T 2a4a_A 52 ELCNESVKTCPFAAAVCVYPKFVKFINEKIKQEINPF---KPKIACVINFPYGTDSMEKVLNDTEKALD-DGADEIDLVI 127 (281)
T ss_dssp HHHHHHHSSSSCCSEEEECGGGHHHHHHHHHHHSSSC---CSEEEEEESTTTCCSCHHHHHHHHHHHHH-HTCSEEEEEC
T ss_pred HHHHHHHhccCCccEEEECHHHHHHHHHHhhccCCCC---CceEEEEeCCCCCCCCHHHHHHHHHHHHH-cCCCEEEEec
Confidence 567788888 888887778886643 331 2110 46788888877667777777788888887 4999999986
Q ss_pred EecCCCCCCcHH---HHHHHHHHHHHc
Q 022088 86 FHWWDYSNPGYL---DALNHLTDLKEE 109 (303)
Q Consensus 86 lH~~~~~~~~~~---~~~~al~~l~~~ 109 (303)
=-..- ....++ .+.+.+..+++.
T Consensus 128 nig~l-ksg~~~~~~~v~~eI~~v~~a 153 (281)
T 2a4a_A 128 NYKKI-IENTDEGLKEATKLTQSVKKL 153 (281)
T ss_dssp CHHHH-HHSHHHHHHHHHHHHHHHHTT
T ss_pred chHhh-hCCChhHHHHHHHHHHHHHHH
Confidence 22210 112234 566666666654
No 218
>3eus_A DNA-binding protein; structural genomics, PSI2,MCSG, protein structure initiative, midwest center for structural genomic binding; 1.80A {Silicibacter pomeroyi}
Probab=20.49 E-value=1.6e+02 Score=19.35 Aligned_cols=54 Identities=20% Similarity=-0.021 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHhhCCCCceeeeccCCCCHhHHHHhHhhhcC
Q 022088 217 LLQTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFML 270 (303)
Q Consensus 217 ~~~~l~~ia~~~g~s~~qlal~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~~~ 270 (303)
+-+.++.+-++.|+|..++|-+--++...+.-+--|-+..+.+.+...+++++.
T Consensus 15 ~g~~l~~~R~~~gltq~elA~~~gis~~~is~~E~G~~~p~~~~l~~ia~~l~v 68 (86)
T 3eus_A 15 LCQRLRQARLDAGLTQADLAERLDKPQSFVAKVETRERRLDVIEFAKWMAACEG 68 (86)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHTTCCHHHHHHHHTTSSCCBHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCCCHHHHHHHhCcCHHHHHHHHCCCCCCCHHHHHHHHHHcCC
Confidence 446777777888888887776655444444444444443356777777777765
No 219
>1x57_A Endothelial differentiation-related factor 1; HMBF1alpha, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.35.1.12
Probab=20.42 E-value=49 Score=22.27 Aligned_cols=22 Identities=9% Similarity=0.144 Sum_probs=16.3
Q ss_pred HHHHHHHHHHhCCCHHHHHHHH
Q 022088 218 LQTLKRIASKHGVSIPVVAVRY 239 (303)
Q Consensus 218 ~~~l~~ia~~~g~s~~qlal~~ 239 (303)
.+.++.+.++.|+|..++|-+-
T Consensus 15 ~~~l~~~r~~~glsq~~lA~~~ 36 (91)
T 1x57_A 15 GKVIQQGRQSKGLTQKDLATKI 36 (91)
T ss_dssp HHHHHHHHHTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHH
Confidence 3677777788888888777554
No 220
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=20.42 E-value=98 Score=26.90 Aligned_cols=63 Identities=14% Similarity=0.094 Sum_probs=45.2
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHhhCCCCceeeeccCCCCHhHHHHhHhhhcC--------C--CCHHHHHHHHHH
Q 022088 219 QTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFML--------S--LDEDDVNSIQEV 283 (303)
Q Consensus 219 ~~l~~ia~~~g~s~~qlal~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~~~--------~--L~~e~~~~i~~~ 283 (303)
+..+++++++|+...---+.=+++.+.|..|++.+. +..|.+-.++|++. | ++-+|.++|.++
T Consensus 49 ~~a~~~a~~~g~~~~~~d~~~ll~~~~iDaV~I~tP--~~~H~~~~~~al~aGkhVl~EKPla~t~~ea~~l~~~ 121 (390)
T 4h3v_A 49 EAVRAAAGKLGWSTTETDWRTLLERDDVQLVDVCTP--GDSHAEIAIAALEAGKHVLCEKPLANTVAEAEAMAAA 121 (390)
T ss_dssp HHHHHHHHHHTCSEEESCHHHHTTCTTCSEEEECSC--GGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCC--hHHHHHHHHHHHHcCCCceeecCcccchhHHHHHHHH
Confidence 667788899987533223455788899999998888 88787777766633 4 566888887555
No 221
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=20.25 E-value=1.2e+02 Score=26.39 Aligned_cols=68 Identities=12% Similarity=0.117 Sum_probs=46.5
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHhhCCCCceeeeccCCCCHhHHHHhHhhhc--------CC--CCHHHHHHHHHHHhcCC
Q 022088 219 QTLKRIASKHGVSIPVVAVRYILDQPAVAGSMIGVRLGLAEHIQDTNAIFM--------LS--LDEDDVNSIQEVTKKGK 288 (303)
Q Consensus 219 ~~l~~ia~~~g~s~~qlal~~~l~~~~v~~vi~G~~~~~~~~l~en~~a~~--------~~--L~~e~~~~i~~~~~~~~ 288 (303)
+..+++++++|+... --+.=++..+.+..|++.+. +..|.+-..++++ .| ++.++.++|.++.++..
T Consensus 64 ~~~~~~a~~~g~~~~-~~~~~ll~~~~~D~V~i~tp--~~~h~~~~~~al~aGk~Vl~EKP~a~~~~ea~~l~~~a~~~g 140 (350)
T 3rc1_A 64 DRAKRFTERFGGEPV-EGYPALLERDDVDAVYVPLP--AVLHAEWIDRALRAGKHVLAEKPLTTDRPQAERLFAVARERG 140 (350)
T ss_dssp HHHHHHHHHHCSEEE-ESHHHHHTCTTCSEEEECCC--GGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCCc-CCHHHHhcCCCCCEEEECCC--cHHHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 566777888887543 33444667778888888777 7777666655542 24 57889999988887654
Q ss_pred C
Q 022088 289 D 289 (303)
Q Consensus 289 ~ 289 (303)
.
T Consensus 141 ~ 141 (350)
T 3rc1_A 141 L 141 (350)
T ss_dssp C
T ss_pred C
Confidence 3
No 222
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=20.13 E-value=2.3e+02 Score=24.62 Aligned_cols=101 Identities=14% Similarity=0.182 Sum_probs=56.0
Q ss_pred CCCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHc-------CCccEEEecCCCHHHHHHHHHc
Q 022088 59 KMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEE-------GKIKTVALTNFDTERLRIILEN 131 (303)
Q Consensus 59 ~~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~-------G~ir~iGvS~~~~~~l~~~~~~ 131 (303)
.++.+...+-++..|.++|+++|.+-..-. . + +-|+.+.++++. ..++..++..... .++.+.+.
T Consensus 37 ~~~~~~k~~i~~~~L~~~Gv~~IE~g~~~~---~-~---~~~~~v~~~~~~~~~~~~~~~~~i~~l~~~~~-~i~~a~~~ 108 (337)
T 3ble_A 37 SFSTSEKLNIAKFLLQKLNVDRVEIASARV---S-K---GELETVQKIMEWAATEQLTERIEILGFVDGNK-TVDWIKDS 108 (337)
T ss_dssp CCCHHHHHHHHHHHHHTTCCSEEEEEETTS---C-T---THHHHHHHHHHHHHHTTCGGGEEEEEESSTTH-HHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHcCCCEEEEeCCCC---C-h---hHHHHHHHHHhhhhhhccCCCCeEEEEccchh-hHHHHHHC
Confidence 456666666555488999999999854321 1 1 113344444442 1245566655444 77777776
Q ss_pred CCCeeeeccccccc------ccC------hhhhHHHHHHHhCCeEEee
Q 022088 132 GIPVVSNQVQHSVV------DMR------PQQKMAELCQLTGVKLITY 167 (303)
Q Consensus 132 ~~~~~~~q~~~n~l------~~~------~~~~~~~~~~~~gi~via~ 167 (303)
+.+...+-..-|.. +.. .-.+.++++++.|+.+..+
T Consensus 109 g~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~ 156 (337)
T 3ble_A 109 GAKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVY 156 (337)
T ss_dssp TCCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 54432222222211 111 1246788999999887754
No 223
>2p3z_A L-rhamnonate dehydratase; enolase, structural genomics, PSI, protein structure initiat YORK structural genomics research consortium; 1.80A {Salmonella typhimurium LT2} PDB: 3box_A 3cxo_A* 2gsh_A 3d47_A 3d46_A 2i5q_A
Probab=20.10 E-value=3e+02 Score=24.62 Aligned_cols=97 Identities=11% Similarity=0.073 Sum_probs=58.2
Q ss_pred CCHHHHHHHHHHHHhhcCCCcccEEEEecCCCCCCcHHHHHHHHHHHHHcCC--c-cEEEecCCCHHHHHHHHHcCCCee
Q 022088 60 MTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGK--I-KTVALTNFDTERLRIILENGIPVV 136 (303)
Q Consensus 60 ~~~~~i~~sve~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~al~~l~~~G~--i-r~iGvS~~~~~~l~~~~~~~~~~~ 136 (303)
++.+...+-++. |+.+ ++.++-.|-... -++.+.+|.+.-. | -..|=+.++...++++++.+ ++
T Consensus 233 ~~~~~Ai~~~~~-l~~~-----~i~~iEqPl~~~-----d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~i~~~--~d 299 (415)
T 2p3z_A 233 QDVNYATKLAHA-CAPF-----NLKWIEECLPPQ-----QYEGYRELKRNAPAGMMVTSGEHHGTLQSFRTLAETG--ID 299 (415)
T ss_dssp CCHHHHHHHHHH-HGGG-----TCCEEECCSCTT-----CHHHHHHHHHHSCTTCEEEECTTCCSHHHHHHHHHTT--CS
T ss_pred CCHHHHHHHHHH-Hhhc-----CCceEeCCCCcc-----hHHHHHHHHHhcCCCCcEEcCCCCCCHHHHHHHHHcC--CC
Confidence 355544444433 4433 455666653322 2455666665433 2 24455667888899888874 88
Q ss_pred eeccccccccc-ChhhhHHHHHHHhCCeEEeecc
Q 022088 137 SNQVQHSVVDM-RPQQKMAELCQLTGVKLITYGT 169 (303)
Q Consensus 137 ~~q~~~n~l~~-~~~~~~~~~~~~~gi~via~sp 169 (303)
++|+..+-.-- ....++...|+++|+.++..+.
T Consensus 300 ~i~ik~~~~GGitea~~ia~lA~~~gi~v~~h~~ 333 (415)
T 2p3z_A 300 IMQPDVGWCGGLTTLVEIAALAKSRGQLVVPHGS 333 (415)
T ss_dssp EECCCHHHHTCHHHHHHHHHHHHHTTCCBCCCCC
T ss_pred EEEeCccccCCHHHHHHHHHHHHHcCCEEEecCh
Confidence 88887654311 1134789999999999887643
Done!