Query 022090
Match_columns 303
No_of_seqs 279 out of 3240
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 13:51:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022090.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022090hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gwf_A Cyclohexanone monooxyge 100.0 1.4E-35 4.7E-40 274.8 20.7 208 7-228 8-220 (540)
2 4ap3_A Steroid monooxygenase; 100.0 2.5E-35 8.6E-40 273.5 21.6 208 7-228 21-233 (549)
3 3uox_A Otemo; baeyer-villiger 100.0 2.5E-35 8.6E-40 273.3 16.2 209 6-228 8-227 (545)
4 1w4x_A Phenylacetone monooxyge 100.0 2.7E-34 9.3E-39 267.1 21.1 208 6-227 15-227 (542)
5 2xve_A Flavin-containing monoo 100.0 1.3E-32 4.4E-37 251.1 21.2 207 8-224 3-234 (464)
6 2gv8_A Monooxygenase; FMO, FAD 100.0 9.8E-31 3.4E-35 238.0 19.7 206 6-220 5-247 (447)
7 4a9w_A Monooxygenase; baeyer-v 100.0 2.9E-30 1E-34 227.5 18.4 199 7-226 3-202 (357)
8 4b63_A L-ornithine N5 monooxyg 99.9 1.6E-26 5.4E-31 212.7 16.6 200 7-225 39-286 (501)
9 4gcm_A TRXR, thioredoxin reduc 99.9 7.7E-26 2.6E-30 196.1 13.5 178 7-226 6-184 (312)
10 3lzw_A Ferredoxin--NADP reduct 99.9 6.9E-26 2.4E-30 197.7 13.0 190 1-224 1-191 (332)
11 4a5l_A Thioredoxin reductase; 99.9 4.8E-25 1.7E-29 191.0 12.7 181 7-220 4-186 (314)
12 2zbw_A Thioredoxin reductase; 99.9 9.2E-25 3.2E-29 191.0 14.2 185 6-224 4-189 (335)
13 2q7v_A Thioredoxin reductase; 99.9 1.6E-24 5.4E-29 188.9 15.1 177 7-219 8-185 (325)
14 3f8d_A Thioredoxin reductase ( 99.9 1.1E-24 3.9E-29 189.1 14.1 177 7-224 15-191 (323)
15 3s5w_A L-ornithine 5-monooxyge 99.9 3.4E-24 1.2E-28 195.7 16.9 201 7-226 30-268 (463)
16 3d1c_A Flavin-containing putat 99.9 6.2E-24 2.1E-28 188.2 17.5 187 7-223 4-202 (369)
17 2q0l_A TRXR, thioredoxin reduc 99.9 2.3E-24 7.8E-29 186.6 13.6 174 8-219 2-176 (311)
18 3itj_A Thioredoxin reductase 1 99.9 9.8E-25 3.4E-29 190.8 11.4 183 7-224 22-210 (338)
19 3ab1_A Ferredoxin--NADP reduct 99.9 4.1E-24 1.4E-28 188.9 14.8 185 7-224 14-200 (360)
20 3r9u_A Thioredoxin reductase; 99.9 8.1E-24 2.8E-28 183.2 13.4 177 6-219 3-180 (315)
21 3fbs_A Oxidoreductase; structu 99.9 1.7E-23 6E-28 179.6 15.1 171 8-219 3-173 (297)
22 2a87_A TRXR, TR, thioredoxin r 99.9 7.8E-24 2.7E-28 185.3 12.5 174 7-219 14-188 (335)
23 1fl2_A Alkyl hydroperoxide red 99.9 1.1E-23 3.6E-28 182.3 11.6 176 8-220 2-178 (310)
24 1vdc_A NTR, NADPH dependent th 99.9 9.1E-24 3.1E-28 184.6 11.3 175 7-219 8-192 (333)
25 4fk1_A Putative thioredoxin re 99.9 3.5E-23 1.2E-27 178.8 13.7 177 4-219 3-180 (304)
26 1trb_A Thioredoxin reductase; 99.9 1.6E-23 5.6E-28 181.9 11.1 174 7-219 5-178 (320)
27 3cty_A Thioredoxin reductase; 99.9 4.4E-23 1.5E-27 179.2 12.7 173 7-219 16-188 (319)
28 3klj_A NAD(FAD)-dependent dehy 99.9 1.3E-24 4.5E-29 193.5 1.8 181 6-234 8-194 (385)
29 1hyu_A AHPF, alkyl hydroperoxi 99.9 1.8E-22 6E-27 186.6 15.8 177 6-219 211-388 (521)
30 3l8k_A Dihydrolipoyl dehydroge 99.9 2.8E-22 9.6E-27 183.1 10.9 198 7-236 4-222 (466)
31 3oc4_A Oxidoreductase, pyridin 99.9 1.5E-21 5.2E-26 177.6 14.6 184 8-233 3-194 (452)
32 1xhc_A NADH oxidase /nitrite r 99.9 2.3E-23 8E-28 184.4 2.0 174 7-231 8-186 (367)
33 3qfa_A Thioredoxin reductase 1 99.9 1.4E-22 4.6E-27 187.4 6.4 203 6-235 31-257 (519)
34 3urh_A Dihydrolipoyl dehydroge 99.9 2.7E-22 9.4E-27 184.4 7.9 203 7-234 25-245 (491)
35 1zk7_A HGII, reductase, mercur 99.9 3.9E-22 1.3E-26 182.3 7.9 200 7-234 4-222 (467)
36 2hqm_A GR, grase, glutathione 99.9 6.1E-23 2.1E-27 188.1 2.4 208 1-236 5-234 (479)
37 1dxl_A Dihydrolipoamide dehydr 99.9 1.5E-21 5E-26 178.6 11.5 204 5-234 4-224 (470)
38 1mo9_A ORF3; nucleotide bindin 99.9 1.7E-21 5.8E-26 180.3 11.6 199 6-232 42-259 (523)
39 1zmd_A Dihydrolipoyl dehydroge 99.9 4E-21 1.4E-25 175.8 13.5 203 6-234 5-226 (474)
40 3dk9_A Grase, GR, glutathione 99.9 3.6E-22 1.2E-26 183.0 6.3 198 7-236 20-236 (478)
41 3kd9_A Coenzyme A disulfide re 99.9 9E-22 3.1E-26 179.0 8.7 185 7-236 3-198 (449)
42 2qae_A Lipoamide, dihydrolipoy 99.9 2.5E-21 8.4E-26 177.0 11.6 203 7-234 2-221 (468)
43 3dgz_A Thioredoxin reductase 2 99.8 2.8E-22 9.7E-27 184.1 5.0 202 6-234 5-231 (488)
44 3ics_A Coenzyme A-disulfide re 99.8 5E-22 1.7E-26 186.5 6.4 192 6-235 35-235 (588)
45 2bc0_A NADH oxidase; flavoprot 99.8 9.1E-22 3.1E-26 180.8 7.9 178 7-224 35-231 (490)
46 3ntd_A FAD-dependent pyridine 99.8 3.4E-22 1.2E-26 186.8 4.9 188 8-234 2-198 (565)
47 2wpf_A Trypanothione reductase 99.8 5.1E-21 1.7E-25 175.9 12.3 206 7-236 7-243 (495)
48 1onf_A GR, grase, glutathione 99.8 4.1E-21 1.4E-25 176.8 11.6 200 7-236 2-225 (500)
49 3iwa_A FAD-dependent pyridine 99.8 2E-21 6.9E-26 177.7 8.7 193 7-232 3-206 (472)
50 2eq6_A Pyruvate dehydrogenase 99.8 6.5E-21 2.2E-25 173.9 11.8 194 7-234 6-216 (464)
51 1lvl_A Dihydrolipoamide dehydr 99.8 1.3E-20 4.5E-25 171.6 13.6 197 6-236 4-220 (458)
52 3dgh_A TRXR-1, thioredoxin red 99.8 1.4E-21 4.8E-26 179.3 6.6 201 6-234 8-233 (483)
53 1ebd_A E3BD, dihydrolipoamide 99.8 1.4E-20 4.8E-25 171.3 12.9 199 7-234 3-217 (455)
54 2gqw_A Ferredoxin reductase; f 99.8 8.1E-21 2.8E-25 170.5 10.7 175 1-225 1-183 (408)
55 3ic9_A Dihydrolipoamide dehydr 99.8 6.3E-23 2.2E-27 188.5 -3.7 200 7-235 8-222 (492)
56 2yqu_A 2-oxoglutarate dehydrog 99.8 6.8E-21 2.3E-25 173.4 9.7 198 8-235 2-215 (455)
57 3lxd_A FAD-dependent pyridine 99.8 1.9E-21 6.4E-26 175.1 5.8 175 6-225 8-190 (415)
58 2r9z_A Glutathione amide reduc 99.8 3.4E-20 1.2E-24 169.1 13.9 192 7-232 4-211 (463)
59 3ef6_A Toluene 1,2-dioxygenase 99.8 7E-22 2.4E-26 177.6 2.6 172 8-225 3-181 (410)
60 1ojt_A Surface protein; redox- 99.8 5.1E-20 1.7E-24 168.8 15.0 205 7-236 6-234 (482)
61 1xdi_A RV3303C-LPDA; reductase 99.8 1.9E-20 6.6E-25 172.4 12.0 206 8-235 3-230 (499)
62 2v3a_A Rubredoxin reductase; a 99.8 5.9E-21 2E-25 170.1 8.2 172 7-225 4-183 (384)
63 4eqs_A Coenzyme A disulfide re 99.8 1.1E-21 3.8E-26 177.6 3.5 192 8-236 1-196 (437)
64 2vdc_G Glutamate synthase [NAD 99.8 5.3E-21 1.8E-25 173.6 7.6 168 6-227 121-306 (456)
65 2a8x_A Dihydrolipoyl dehydroge 99.8 4E-21 1.4E-25 175.4 6.2 201 7-236 3-220 (464)
66 2cdu_A NADPH oxidase; flavoenz 99.8 2.8E-21 9.7E-26 175.8 5.1 187 8-232 1-195 (452)
67 1ges_A Glutathione reductase; 99.8 2.8E-20 9.5E-25 169.1 11.5 194 7-234 4-214 (450)
68 4b1b_A TRXR, thioredoxin reduc 99.8 1.7E-21 5.9E-26 179.8 3.5 208 7-239 42-274 (542)
69 1nhp_A NADH peroxidase; oxidor 99.8 6.8E-21 2.3E-25 173.1 6.8 177 8-224 1-186 (447)
70 1v59_A Dihydrolipoamide dehydr 99.8 4.1E-20 1.4E-24 169.4 11.9 208 7-235 5-231 (478)
71 4dna_A Probable glutathione re 99.8 2E-20 6.7E-25 170.8 9.1 195 7-234 5-217 (463)
72 3lad_A Dihydrolipoamide dehydr 99.8 6.7E-21 2.3E-25 174.5 5.6 203 6-234 2-227 (476)
73 2x8g_A Thioredoxin glutathione 99.8 6.4E-20 2.2E-24 172.5 12.4 199 6-233 106-331 (598)
74 1fec_A Trypanothione reductase 99.8 4.5E-20 1.6E-24 169.4 10.9 202 7-235 3-238 (490)
75 3cgb_A Pyridine nucleotide-dis 99.8 9.7E-21 3.3E-25 173.5 5.2 183 7-230 36-229 (480)
76 3fg2_P Putative rubredoxin red 99.8 1.1E-20 3.8E-25 169.5 5.0 172 8-225 2-180 (404)
77 1q1r_A Putidaredoxin reductase 99.8 2.1E-20 7.2E-25 168.9 6.6 175 7-225 4-187 (431)
78 3o0h_A Glutathione reductase; 99.8 5.1E-20 1.7E-24 168.9 8.9 194 7-233 26-237 (484)
79 1lqt_A FPRA; NADP+ derivative, 99.8 2.3E-20 7.8E-25 169.6 4.9 159 7-219 3-201 (456)
80 1cjc_A Protein (adrenodoxin re 99.8 5.3E-20 1.8E-24 167.3 5.8 162 5-220 4-200 (460)
81 3k30_A Histamine dehydrogenase 99.8 3.3E-20 1.1E-24 177.0 4.3 166 6-226 390-564 (690)
82 1o94_A Tmadh, trimethylamine d 99.8 1.1E-19 3.7E-24 174.2 6.8 171 6-224 388-566 (729)
83 1ps9_A 2,4-dienoyl-COA reducta 99.8 1.2E-18 3.9E-23 165.9 8.5 150 6-214 372-522 (671)
84 2gag_A Heterotetrameric sarcos 99.7 6.8E-18 2.3E-22 166.0 13.3 181 7-223 128-320 (965)
85 4g6h_A Rotenone-insensitive NA 99.7 1.5E-19 5E-24 166.1 1.0 195 6-238 41-282 (502)
86 1gte_A Dihydropyrimidine dehyd 99.7 1.2E-18 4.2E-23 172.3 7.2 171 7-228 187-375 (1025)
87 3h8l_A NADH oxidase; membrane 99.7 4.5E-18 1.5E-22 152.7 2.9 178 8-231 2-221 (409)
88 1m6i_A Programmed cell death p 99.7 3.7E-18 1.3E-22 156.7 -0.5 186 6-219 10-217 (493)
89 3sx6_A Sulfide-quinone reducta 99.7 5.4E-18 1.8E-22 153.5 0.3 170 7-222 4-199 (437)
90 2gqf_A Hypothetical protein HI 99.6 5.3E-16 1.8E-20 138.6 9.0 135 7-152 4-171 (401)
91 1y56_A Hypothetical protein PH 99.6 2.1E-15 7.1E-20 138.4 10.3 163 7-212 108-274 (493)
92 3v76_A Flavoprotein; structura 99.4 7.5E-13 2.6E-17 118.7 12.4 134 6-152 26-190 (417)
93 3h28_A Sulfide-quinone reducta 99.4 1.9E-15 6.7E-20 136.4 -4.8 163 8-219 3-189 (430)
94 3cgv_A Geranylgeranyl reductas 99.4 1.6E-12 5.5E-17 115.7 12.5 134 7-149 4-162 (397)
95 3fpz_A Thiazole biosynthetic e 99.4 1.7E-14 5.8E-19 125.5 -0.4 150 7-219 65-216 (326)
96 2ywl_A Thioredoxin reductase r 99.4 1.2E-12 4.2E-17 103.6 10.0 111 8-153 2-112 (180)
97 3oz2_A Digeranylgeranylglycero 99.4 2E-12 7E-17 114.7 11.7 134 7-149 4-162 (397)
98 3vrd_B FCCB subunit, flavocyto 99.4 1.4E-13 4.7E-18 123.1 2.8 116 7-162 2-119 (401)
99 3ces_A MNMG, tRNA uridine 5-ca 99.4 2.4E-12 8E-17 119.9 10.4 169 6-217 27-221 (651)
100 3nix_A Flavoprotein/dehydrogen 99.4 6.9E-12 2.4E-16 112.6 13.1 135 7-149 5-166 (421)
101 2qa1_A PGAE, polyketide oxygen 99.3 8.1E-12 2.8E-16 114.7 13.3 137 4-149 8-165 (500)
102 3rp8_A Flavoprotein monooxygen 99.3 3.1E-12 1.1E-16 114.5 10.2 131 6-150 22-182 (407)
103 2cul_A Glucose-inhibited divis 99.3 4.1E-12 1.4E-16 104.9 10.1 124 7-151 3-127 (232)
104 2bry_A NEDD9 interacting prote 99.3 1.3E-12 4.3E-17 120.0 6.5 139 6-151 91-232 (497)
105 3qj4_A Renalase; FAD/NAD(P)-bi 99.3 2.1E-12 7.1E-17 112.9 7.3 128 8-147 2-163 (342)
106 2qa2_A CABE, polyketide oxygen 99.3 1.3E-11 4.4E-16 113.3 12.7 135 6-149 11-166 (499)
107 1yvv_A Amine oxidase, flavin-c 99.3 1.1E-11 3.8E-16 107.8 11.0 129 8-149 3-162 (336)
108 3ihg_A RDME; flavoenzyme, anth 99.3 1.9E-11 6.6E-16 113.2 13.3 137 6-149 4-183 (535)
109 3fmw_A Oxygenase; mithramycin, 99.3 9.1E-12 3.1E-16 116.0 11.0 134 7-149 49-207 (570)
110 2gmh_A Electron transfer flavo 99.3 3.9E-11 1.3E-15 112.1 14.7 138 7-149 35-217 (584)
111 2xdo_A TETX2 protein; tetracyc 99.3 1.5E-11 5.2E-16 109.7 11.3 130 6-150 25-183 (398)
112 3alj_A 2-methyl-3-hydroxypyrid 99.3 7.5E-12 2.6E-16 110.9 9.0 126 7-149 11-160 (379)
113 3e1t_A Halogenase; flavoprotei 99.3 3.4E-11 1.2E-15 111.0 13.7 142 1-150 1-173 (512)
114 2zxi_A TRNA uridine 5-carboxym 99.3 1.1E-11 3.8E-16 115.1 10.1 169 6-217 26-220 (637)
115 3dje_A Fructosyl amine: oxygen 99.3 3.8E-11 1.3E-15 108.4 12.3 60 79-150 159-222 (438)
116 2r0c_A REBC; flavin adenine di 99.3 8.6E-11 2.9E-15 109.2 14.9 134 7-150 26-197 (549)
117 2dkh_A 3-hydroxybenzoate hydro 99.3 9.4E-11 3.2E-15 110.8 15.2 141 6-150 31-212 (639)
118 2i0z_A NAD(FAD)-utilizing dehy 99.2 1.6E-11 5.3E-16 111.3 8.9 134 7-151 26-193 (447)
119 3i3l_A Alkylhalidase CMLS; fla 99.2 5.8E-11 2E-15 110.9 12.4 135 7-149 23-188 (591)
120 1rp0_A ARA6, thiazole biosynth 99.2 8.7E-11 3E-15 100.0 12.2 136 7-148 39-190 (284)
121 2vou_A 2,6-dihydroxypyridine h 99.2 7E-11 2.4E-15 105.4 11.9 126 6-150 4-154 (397)
122 3nlc_A Uncharacterized protein 99.2 1.2E-10 4.3E-15 107.3 13.8 132 7-149 107-277 (549)
123 3hyw_A Sulfide-quinone reducta 99.2 1.3E-13 4.6E-18 124.3 -6.1 114 8-161 3-118 (430)
124 1k0i_A P-hydroxybenzoate hydro 99.2 1.8E-11 6E-16 109.1 7.6 134 8-150 3-164 (394)
125 2x3n_A Probable FAD-dependent 99.2 3.2E-11 1.1E-15 107.5 9.3 132 7-150 6-167 (399)
126 1y0p_A Fumarate reductase flav 99.2 2.8E-10 9.5E-15 106.3 15.8 136 7-150 126-318 (571)
127 3c96_A Flavin-containing monoo 99.2 3E-10 1E-14 101.7 15.3 137 7-150 4-170 (410)
128 3dme_A Conserved exported prot 99.2 8.7E-11 3E-15 103.2 11.5 62 79-149 148-209 (369)
129 3cp8_A TRNA uridine 5-carboxym 99.2 9.9E-11 3.4E-15 109.0 11.2 169 6-217 20-215 (641)
130 3atr_A Conserved archaeal prot 99.2 8.4E-11 2.9E-15 106.7 10.6 135 7-150 6-163 (453)
131 4hb9_A Similarities with proba 99.2 1.2E-10 4.2E-15 103.8 11.1 129 8-150 2-167 (412)
132 2uzz_A N-methyl-L-tryptophan o 99.2 1.4E-10 4.6E-15 102.4 11.1 62 80-154 148-209 (372)
133 1qo8_A Flavocytochrome C3 fuma 99.2 3.4E-10 1.2E-14 105.5 14.1 139 6-150 120-313 (566)
134 1ryi_A Glycine oxidase; flavop 99.1 1.9E-10 6.5E-15 101.8 11.1 60 77-149 160-219 (382)
135 3ps9_A TRNA 5-methylaminomethy 99.1 2.2E-10 7.5E-15 109.1 11.6 59 79-149 415-473 (676)
136 1pn0_A Phenol 2-monooxygenase; 99.1 7.4E-10 2.5E-14 105.0 15.0 139 7-150 8-231 (665)
137 3jsk_A Cypbp37 protein; octame 99.1 3.1E-10 1.1E-14 98.1 11.0 104 7-113 79-191 (344)
138 3pvc_A TRNA 5-methylaminomethy 99.1 5.8E-10 2E-14 106.4 13.0 60 79-150 410-470 (689)
139 3da1_A Glycerol-3-phosphate de 99.1 1.1E-09 3.7E-14 101.9 14.0 65 79-149 168-232 (561)
140 4at0_A 3-ketosteroid-delta4-5a 99.1 2.6E-09 8.9E-14 98.3 16.4 61 82-149 203-264 (510)
141 2e5v_A L-aspartate oxidase; ar 99.1 7E-10 2.4E-14 101.1 12.3 193 9-227 1-249 (472)
142 1y56_B Sarcosine oxidase; dehy 99.1 1.2E-09 3.9E-14 96.8 13.0 59 78-149 146-205 (382)
143 3nyc_A D-arginine dehydrogenas 99.1 3.5E-10 1.2E-14 99.9 9.2 58 79-149 152-209 (381)
144 2gf3_A MSOX, monomeric sarcosi 99.1 1.1E-09 3.6E-14 97.1 12.1 58 79-149 148-205 (389)
145 2oln_A NIKD protein; flavoprot 99.1 9.2E-10 3.2E-14 98.0 11.5 56 80-148 152-207 (397)
146 2qcu_A Aerobic glycerol-3-phos 99.0 3.4E-09 1.2E-13 97.3 14.9 64 79-149 147-210 (501)
147 2gag_B Heterotetrameric sarcos 99.0 1.5E-09 5E-14 96.8 11.1 60 78-149 171-230 (405)
148 2aqj_A Tryptophan halogenase, 99.0 4.5E-10 1.5E-14 104.1 7.8 62 78-150 162-223 (538)
149 1d4d_A Flavocytochrome C fumar 99.0 1.1E-08 3.7E-13 95.4 16.8 138 7-150 126-318 (572)
150 2gjc_A Thiazole biosynthetic e 99.0 2E-09 7E-14 92.5 10.8 105 7-113 65-177 (326)
151 2wdq_A Succinate dehydrogenase 99.0 4.2E-09 1.5E-13 98.4 13.4 145 1-150 1-207 (588)
152 3ka7_A Oxidoreductase; structu 99.0 1.9E-09 6.6E-14 96.7 9.7 39 8-46 1-39 (425)
153 3c4n_A Uncharacterized protein 98.9 4.5E-10 1.5E-14 100.4 4.9 37 7-43 36-74 (405)
154 3kkj_A Amine oxidase, flavin-c 98.9 1.2E-09 4E-14 91.4 6.9 41 8-48 3-43 (336)
155 2pyx_A Tryptophan halogenase; 98.9 4.2E-09 1.4E-13 97.3 10.9 62 78-150 172-234 (526)
156 3k7m_X 6-hydroxy-L-nicotine ox 98.9 3.9E-09 1.3E-13 94.9 10.1 39 8-46 2-40 (431)
157 3nrn_A Uncharacterized protein 98.9 1.8E-09 6E-14 96.9 7.6 39 8-46 1-39 (421)
158 2e4g_A Tryptophan halogenase; 98.9 6.5E-09 2.2E-13 96.6 11.2 62 78-150 191-253 (550)
159 3i6d_A Protoporphyrinogen oxid 98.9 1.9E-09 6.6E-14 97.9 7.2 39 7-45 5-49 (470)
160 2weu_A Tryptophan 5-halogenase 98.9 4.3E-09 1.5E-13 96.9 9.3 62 78-150 170-231 (511)
161 2rgh_A Alpha-glycerophosphate 98.9 2.8E-08 9.6E-13 92.6 13.5 38 7-44 32-69 (571)
162 1pj5_A N,N-dimethylglycine oxi 98.8 1.7E-08 5.9E-13 98.2 12.1 58 79-149 149-207 (830)
163 1chu_A Protein (L-aspartate ox 98.8 1.3E-08 4.4E-13 94.2 10.3 38 6-44 7-44 (540)
164 2yqu_A 2-oxoglutarate dehydrog 98.8 3.1E-08 1.1E-12 89.8 12.1 100 7-153 167-266 (455)
165 1kf6_A Fumarate reductase flav 98.8 6.7E-08 2.3E-12 90.5 14.2 36 7-42 5-42 (602)
166 2v3a_A Rubredoxin reductase; a 98.8 3.2E-08 1.1E-12 87.7 11.3 97 7-147 145-241 (384)
167 2eq6_A Pyruvate dehydrogenase 98.8 5E-08 1.7E-12 88.6 12.4 106 7-154 169-274 (464)
168 2h88_A Succinate dehydrogenase 98.8 5.2E-08 1.8E-12 91.4 12.8 37 7-43 18-54 (621)
169 2bs2_A Quinol-fumarate reducta 98.8 8E-08 2.7E-12 90.7 14.1 37 6-42 4-40 (660)
170 1v59_A Dihydrolipoamide dehydr 98.8 9E-08 3.1E-12 87.3 14.0 108 7-154 183-290 (478)
171 2e1m_A L-glutamate oxidase; L- 98.8 2.2E-08 7.6E-13 88.0 9.5 44 5-48 42-86 (376)
172 3c4a_A Probable tryptophan hyd 98.8 2E-09 6.9E-14 95.3 2.4 119 8-150 1-144 (381)
173 1ebd_A E3BD, dihydrolipoamide 98.8 9.4E-08 3.2E-12 86.6 13.2 103 7-153 170-272 (455)
174 4gde_A UDP-galactopyranose mut 98.7 5.1E-09 1.8E-13 96.2 4.6 46 1-46 4-50 (513)
175 1nhp_A NADH peroxidase; oxidor 98.7 3.3E-08 1.1E-12 89.4 9.3 102 6-154 148-249 (447)
176 1ges_A Glutathione reductase; 98.7 7.1E-08 2.4E-12 87.3 11.5 101 7-153 167-267 (450)
177 3gyx_A Adenylylsulfate reducta 98.7 9.9E-08 3.4E-12 90.1 12.8 35 7-41 22-62 (662)
178 2r9z_A Glutathione amide reduc 98.7 9E-08 3.1E-12 86.9 11.7 100 7-153 166-266 (463)
179 3axb_A Putative oxidoreductase 98.7 5E-08 1.7E-12 88.2 9.7 33 7-39 23-56 (448)
180 3urh_A Dihydrolipoyl dehydroge 98.7 3.2E-07 1.1E-11 84.0 14.4 106 6-153 197-302 (491)
181 4b1b_A TRXR, thioredoxin reduc 98.7 1.8E-07 6.2E-12 86.3 12.5 101 5-153 221-321 (542)
182 2bcg_G Secretory pathway GDP d 98.7 2.4E-08 8.1E-13 90.5 6.2 47 1-47 5-51 (453)
183 1jnr_A Adenylylsulfate reducta 98.7 3.3E-07 1.1E-11 86.6 14.0 35 7-41 22-60 (643)
184 4gut_A Lysine-specific histone 98.6 1.9E-07 6.5E-12 89.6 12.4 38 7-44 336-373 (776)
185 1zmd_A Dihydrolipoyl dehydroge 98.6 4.7E-07 1.6E-11 82.4 14.2 107 7-153 178-284 (474)
186 2a8x_A Dihydrolipoyl dehydroge 98.6 2.8E-07 9.7E-12 83.7 12.6 102 7-153 171-273 (464)
187 4dgk_A Phytoene dehydrogenase; 98.6 2.7E-08 9.1E-13 91.2 5.8 40 7-46 1-40 (501)
188 1v0j_A UDP-galactopyranose mut 98.6 3.2E-08 1.1E-12 88.2 5.9 49 1-49 1-50 (399)
189 2qae_A Lipoamide, dihydrolipoy 98.6 3.4E-07 1.2E-11 83.2 12.7 102 7-153 174-278 (468)
190 3s5w_A L-ornithine 5-monooxyge 98.6 2.8E-07 9.5E-12 83.6 12.0 171 7-195 227-418 (463)
191 3lxd_A FAD-dependent pyridine 98.6 2.9E-07 9.9E-12 82.4 11.8 101 7-152 152-252 (415)
192 3cgb_A Pyridine nucleotide-dis 98.6 1.6E-07 5.5E-12 85.7 10.1 99 6-152 185-283 (480)
193 1ojt_A Surface protein; redox- 98.6 1.2E-07 4.3E-12 86.5 9.3 103 7-153 185-288 (482)
194 1fec_A Trypanothione reductase 98.6 3.1E-07 1.1E-11 84.0 11.8 101 7-153 187-290 (490)
195 1dxl_A Dihydrolipoamide dehydr 98.6 2.3E-07 7.9E-12 84.4 10.9 105 7-153 177-281 (470)
196 1lvl_A Dihydrolipoamide dehydr 98.6 9.9E-08 3.4E-12 86.5 8.3 101 7-154 171-271 (458)
197 3ic9_A Dihydrolipoamide dehydr 98.6 5.8E-07 2E-11 82.2 13.4 104 7-154 174-277 (492)
198 3oc4_A Oxidoreductase, pyridin 98.6 4.4E-07 1.5E-11 82.1 12.4 101 7-154 147-247 (452)
199 3fg2_P Putative rubredoxin red 98.6 2.5E-07 8.7E-12 82.4 10.7 101 7-152 142-242 (404)
200 3ef6_A Toluene 1,2-dioxygenase 98.6 1.1E-07 3.6E-12 85.1 8.2 100 7-152 143-242 (410)
201 2b9w_A Putative aminooxidase; 98.6 8.8E-08 3E-12 85.9 7.7 47 1-48 1-48 (424)
202 2wpf_A Trypanothione reductase 98.6 3.7E-07 1.3E-11 83.6 11.9 101 7-153 191-294 (495)
203 1onf_A GR, grase, glutathione 98.6 5.3E-07 1.8E-11 82.7 12.9 102 7-153 176-277 (500)
204 2gqw_A Ferredoxin reductase; f 98.6 2.5E-07 8.7E-12 82.6 10.5 96 7-152 145-240 (408)
205 1zk7_A HGII, reductase, mercur 98.6 3.5E-07 1.2E-11 83.1 11.5 97 7-152 176-272 (467)
206 2hqm_A GR, grase, glutathione 98.6 3.6E-07 1.2E-11 83.3 11.5 103 7-153 185-287 (479)
207 3dk9_A Grase, GR, glutathione 98.6 8E-07 2.7E-11 81.0 13.8 108 7-154 187-296 (478)
208 1q1r_A Putidaredoxin reductase 98.6 3.5E-07 1.2E-11 82.3 11.1 102 7-152 149-251 (431)
209 1mo9_A ORF3; nucleotide bindin 98.6 3.9E-07 1.3E-11 84.0 11.7 100 8-153 215-318 (523)
210 1xdi_A RV3303C-LPDA; reductase 98.6 4E-07 1.4E-11 83.5 11.6 100 7-153 182-281 (499)
211 3lad_A Dihydrolipoamide dehydr 98.6 6.4E-07 2.2E-11 81.6 12.8 104 6-153 179-282 (476)
212 3dgh_A TRXR-1, thioredoxin red 98.6 1.4E-06 4.7E-11 79.6 14.8 104 7-152 187-290 (483)
213 3dgz_A Thioredoxin reductase 2 98.5 1.7E-06 5.7E-11 79.1 15.1 105 7-153 185-289 (488)
214 2cdu_A NADPH oxidase; flavoenz 98.5 4.5E-07 1.5E-11 82.1 11.1 101 7-153 149-249 (452)
215 3iwa_A FAD-dependent pyridine 98.5 4.9E-07 1.7E-11 82.3 11.2 97 7-147 159-256 (472)
216 3o0h_A Glutathione reductase; 98.5 4.8E-07 1.6E-11 82.6 11.0 100 7-153 191-290 (484)
217 2bc0_A NADH oxidase; flavoprot 98.5 4.2E-07 1.4E-11 83.1 10.2 101 6-153 193-293 (490)
218 3ntd_A FAD-dependent pyridine 98.5 6.9E-07 2.3E-11 83.2 11.4 98 7-147 151-265 (565)
219 1trb_A Thioredoxin reductase; 98.5 1.4E-06 4.6E-11 74.8 11.7 103 7-152 145-248 (320)
220 3qfa_A Thioredoxin reductase 1 98.4 4.3E-06 1.5E-10 76.9 15.2 106 7-153 210-317 (519)
221 4eqs_A Coenzyme A disulfide re 98.4 4.5E-07 1.5E-11 81.7 8.4 95 7-152 147-241 (437)
222 3hdq_A UDP-galactopyranose mut 98.4 2E-07 6.9E-12 82.6 5.9 43 6-48 28-70 (397)
223 1rsg_A FMS1 protein; FAD bindi 98.4 1.2E-07 4.2E-12 87.2 4.6 40 7-46 8-48 (516)
224 4dsg_A UDP-galactopyranose mut 98.4 3.7E-07 1.3E-11 83.3 7.4 43 6-48 8-51 (484)
225 1m6i_A Programmed cell death p 98.4 1.1E-06 3.8E-11 80.3 10.6 101 7-153 180-284 (493)
226 2ivd_A PPO, PPOX, protoporphyr 98.4 2.6E-07 8.9E-12 84.1 6.0 41 6-46 15-55 (478)
227 1sez_A Protoporphyrinogen oxid 98.4 3.1E-07 1.1E-11 84.2 5.9 41 7-47 13-53 (504)
228 2zbw_A Thioredoxin reductase; 98.4 3.3E-06 1.1E-10 72.9 12.0 102 7-152 152-253 (335)
229 1s3e_A Amine oxidase [flavin-c 98.4 3E-07 1E-11 84.7 5.6 40 7-46 4-43 (520)
230 2jae_A L-amino acid oxidase; o 98.4 3.6E-07 1.2E-11 83.5 6.1 41 6-46 10-50 (489)
231 4dna_A Probable glutathione re 98.4 2.5E-06 8.4E-11 77.4 11.5 100 7-153 170-270 (463)
232 1xhc_A NADH oxidase /nitrite r 98.4 6.8E-07 2.3E-11 78.6 7.2 92 8-152 144-235 (367)
233 3nks_A Protoporphyrinogen oxid 98.3 4E-07 1.4E-11 82.8 5.0 39 8-46 3-43 (477)
234 2iid_A L-amino-acid oxidase; f 98.3 5.3E-07 1.8E-11 82.5 5.7 41 6-46 32-72 (498)
235 2yg5_A Putrescine oxidase; oxi 98.3 6.1E-07 2.1E-11 81.1 6.0 41 7-47 5-45 (453)
236 2bi7_A UDP-galactopyranose mut 98.3 5.8E-07 2E-11 79.6 5.6 41 8-48 4-44 (384)
237 3ics_A Coenzyme A-disulfide re 98.3 1.7E-06 5.9E-11 80.9 9.0 94 7-147 187-280 (588)
238 2vvm_A Monoamine oxidase N; FA 98.3 6.4E-07 2.2E-11 81.9 6.0 38 8-45 40-77 (495)
239 1i8t_A UDP-galactopyranose mut 98.3 6E-07 2E-11 79.0 5.3 41 8-48 2-42 (367)
240 3kd9_A Coenzyme A disulfide re 98.3 2.5E-06 8.7E-11 77.0 9.6 98 7-152 148-245 (449)
241 3d1c_A Flavin-containing putat 98.3 2.7E-06 9.3E-11 74.5 9.6 108 7-153 166-274 (369)
242 3itj_A Thioredoxin reductase 1 98.3 7.3E-06 2.5E-10 70.6 12.1 96 7-147 173-269 (338)
243 1fl2_A Alkyl hydroperoxide red 98.3 8.6E-06 2.9E-10 69.5 11.8 99 7-152 144-243 (310)
244 3lov_A Protoporphyrinogen oxid 98.2 8.6E-07 2.9E-11 80.6 5.6 40 7-46 4-45 (475)
245 1d5t_A Guanine nucleotide diss 98.2 1.2E-06 4.2E-11 78.7 6.4 42 6-47 5-46 (433)
246 3cty_A Thioredoxin reductase; 98.2 1.1E-05 3.9E-10 69.1 12.1 99 7-152 155-253 (319)
247 2q7v_A Thioredoxin reductase; 98.2 5.4E-06 1.8E-10 71.3 10.0 99 7-152 152-250 (325)
248 3ab1_A Ferredoxin--NADP reduct 98.2 6.7E-06 2.3E-10 71.8 10.7 102 7-152 163-264 (360)
249 2x8g_A Thioredoxin glutathione 98.2 2.6E-05 8.9E-10 73.0 14.9 105 7-153 286-397 (598)
250 3l8k_A Dihydrolipoyl dehydroge 98.2 6.5E-06 2.2E-10 74.7 10.5 104 7-154 172-275 (466)
251 1b37_A Protein (polyamine oxid 98.2 1.5E-06 5.3E-11 78.9 6.0 43 6-48 3-46 (472)
252 3lzw_A Ferredoxin--NADP reduct 98.2 1.1E-05 3.7E-10 69.3 11.2 98 7-152 154-251 (332)
253 2q0l_A TRXR, thioredoxin reduc 98.2 6.1E-06 2.1E-10 70.5 9.3 101 7-153 143-243 (311)
254 1vdc_A NTR, NADPH dependent th 98.2 8.4E-06 2.9E-10 70.3 10.0 102 7-153 159-261 (333)
255 3f8d_A Thioredoxin reductase ( 98.2 9.2E-06 3.2E-10 69.5 10.1 99 7-152 154-252 (323)
256 1c0p_A D-amino acid oxidase; a 98.2 2.1E-06 7.1E-11 75.2 5.8 36 6-41 5-40 (363)
257 3ihm_A Styrene monooxygenase A 98.2 1.3E-06 4.3E-11 78.6 4.5 34 7-40 22-55 (430)
258 3klj_A NAD(FAD)-dependent dehy 98.1 1.6E-06 5.5E-11 76.7 4.8 87 7-152 146-232 (385)
259 2a87_A TRXR, TR, thioredoxin r 98.1 6.9E-06 2.4E-10 71.0 8.7 100 7-153 155-254 (335)
260 3p1w_A Rabgdi protein; GDI RAB 98.1 2E-06 6.7E-11 77.8 5.3 41 6-46 19-59 (475)
261 4g6h_A Rotenone-insensitive NA 98.1 6.8E-06 2.3E-10 75.3 8.5 99 8-147 218-330 (502)
262 3r9u_A Thioredoxin reductase; 98.1 1.1E-05 3.8E-10 68.8 9.0 99 7-152 147-245 (315)
263 3pl8_A Pyranose 2-oxidase; sub 98.0 3.4E-06 1.2E-10 79.2 5.1 40 7-46 46-85 (623)
264 2z3y_A Lysine-specific histone 98.0 4.8E-06 1.6E-10 78.9 6.0 41 6-46 106-146 (662)
265 4a5l_A Thioredoxin reductase; 98.0 2.6E-05 8.9E-10 66.5 10.1 34 7-40 152-185 (314)
266 2xag_A Lysine-specific histone 98.0 5.9E-06 2E-10 80.0 6.1 41 6-46 277-317 (852)
267 1hyu_A AHPF, alkyl hydroperoxi 98.0 3.6E-05 1.2E-09 70.8 11.0 99 7-152 355-454 (521)
268 3k30_A Histamine dehydrogenase 98.0 1.4E-05 4.9E-10 76.0 8.5 97 7-146 523-621 (690)
269 3g3e_A D-amino-acid oxidase; F 98.0 3.8E-06 1.3E-10 73.2 3.6 34 8-41 1-40 (351)
270 3fbs_A Oxidoreductase; structu 97.9 7.5E-06 2.6E-10 69.2 5.2 88 7-153 141-228 (297)
271 3g5s_A Methylenetetrahydrofola 97.9 1.4E-05 4.6E-10 70.0 5.9 36 8-43 2-37 (443)
272 1vg0_A RAB proteins geranylger 97.8 2.7E-05 9.4E-10 72.7 6.2 45 4-48 5-49 (650)
273 2gag_A Heterotetrameric sarcos 97.8 0.00015 5E-09 71.6 11.7 97 7-152 284-384 (965)
274 2xve_A Flavin-containing monoo 97.8 7.6E-05 2.6E-09 67.6 8.9 35 7-41 197-231 (464)
275 4gcm_A TRXR, thioredoxin reduc 97.7 0.00015 5.1E-09 61.8 9.7 35 7-41 145-179 (312)
276 2vdc_G Glutamate synthase [NAD 97.6 0.00017 5.8E-09 65.1 8.8 36 6-41 263-299 (456)
277 2gv8_A Monooxygenase; FMO, FAD 97.6 0.00013 4.6E-09 65.6 8.1 35 7-41 212-247 (447)
278 3gwf_A Cyclohexanone monooxyge 97.6 0.00029 9.8E-09 65.0 10.3 35 7-41 178-212 (540)
279 3ayj_A Pro-enzyme of L-phenyla 97.6 1.8E-05 6.2E-10 74.8 2.1 36 7-42 56-100 (721)
280 1ps9_A 2,4-dienoyl-COA reducta 97.6 0.00021 7.1E-09 67.8 9.2 29 7-35 494-522 (671)
281 4a9w_A Monooxygenase; baeyer-v 97.6 7.7E-05 2.6E-09 64.6 5.5 33 7-40 163-195 (357)
282 3t37_A Probable dehydrogenase; 97.5 5.2E-05 1.8E-09 69.7 4.3 36 6-41 16-52 (526)
283 1kdg_A CDH, cellobiose dehydro 97.5 6.9E-05 2.3E-09 69.4 5.0 36 6-41 6-41 (546)
284 1cjc_A Protein (adrenodoxin re 97.5 0.00061 2.1E-08 61.6 11.0 35 7-41 145-200 (460)
285 3sx6_A Sulfide-quinone reducta 97.5 0.00033 1.1E-08 62.9 8.5 103 8-147 150-267 (437)
286 1lqt_A FPRA; NADP+ derivative, 97.4 0.00063 2.2E-08 61.4 9.5 36 7-42 147-203 (456)
287 3q9t_A Choline dehydrogenase a 97.4 0.00013 4.5E-09 67.7 4.7 36 6-41 5-41 (577)
288 3h28_A Sulfide-quinone reducta 97.4 0.00044 1.5E-08 61.9 7.9 98 8-147 143-254 (430)
289 1o94_A Tmadh, trimethylamine d 97.4 0.00034 1.2E-08 66.9 7.6 104 7-152 528-647 (729)
290 1ju2_A HydroxynitrIle lyase; f 97.3 9E-05 3.1E-09 68.4 3.3 35 7-42 26-60 (536)
291 2g1u_A Hypothetical protein TM 97.3 0.00027 9.2E-09 53.8 4.9 41 1-41 13-53 (155)
292 1gte_A Dihydropyrimidine dehyd 97.3 0.0021 7.2E-08 63.9 12.3 34 7-40 332-366 (1025)
293 1n4w_A CHOD, cholesterol oxida 97.3 0.00024 8.1E-09 65.1 5.1 38 6-43 4-41 (504)
294 3qvp_A Glucose oxidase; oxidor 97.2 0.00025 8.6E-09 65.9 4.5 35 6-40 18-53 (583)
295 1coy_A Cholesterol oxidase; ox 97.1 0.00035 1.2E-08 64.0 4.8 36 6-41 10-45 (507)
296 2ywl_A Thioredoxin reductase r 97.1 0.00034 1.2E-08 54.5 4.0 32 188-219 3-34 (180)
297 1gpe_A Protein (glucose oxidas 97.0 0.00053 1.8E-08 64.0 5.1 36 6-41 23-59 (587)
298 3fim_B ARYL-alcohol oxidase; A 97.0 0.00025 8.5E-09 65.7 2.8 36 7-42 2-38 (566)
299 2jbv_A Choline oxidase; alcoho 96.9 0.00059 2E-08 63.1 4.4 36 7-42 13-49 (546)
300 3h8l_A NADH oxidase; membrane 96.9 0.0025 8.4E-08 56.5 8.0 51 81-147 218-268 (409)
301 3kkj_A Amine oxidase, flavin-c 96.8 0.00067 2.3E-08 55.8 3.6 32 188-219 4-35 (336)
302 3fwz_A Inner membrane protein 96.8 0.0024 8.4E-08 47.5 6.0 34 7-40 7-40 (140)
303 3llv_A Exopolyphosphatase-rela 96.7 0.0021 7.1E-08 47.8 5.4 34 7-40 6-39 (141)
304 4b63_A L-ornithine N5 monooxyg 96.7 0.013 4.5E-07 53.4 11.5 36 6-41 245-282 (501)
305 1id1_A Putative potassium chan 96.6 0.0038 1.3E-07 47.1 5.8 34 7-40 3-36 (153)
306 1lss_A TRK system potassium up 96.5 0.0028 9.4E-08 46.8 4.7 34 7-40 4-37 (140)
307 2cul_A Glucose-inhibited divis 96.4 0.002 6.7E-08 52.5 3.7 32 187-218 4-35 (232)
308 4dgk_A Phytoene dehydrogenase; 96.4 0.0014 4.7E-08 59.7 3.0 33 187-219 2-34 (501)
309 3ic5_A Putative saccharopine d 96.4 0.0032 1.1E-07 44.9 4.2 34 7-40 5-39 (118)
310 3ado_A Lambda-crystallin; L-gu 96.3 0.0038 1.3E-07 53.2 5.1 39 1-40 1-39 (319)
311 4fk1_A Putative thioredoxin re 96.3 0.019 6.5E-07 48.4 9.3 34 7-40 146-180 (304)
312 2hmt_A YUAA protein; RCK, KTN, 96.2 0.0058 2E-07 45.2 5.1 34 7-40 6-39 (144)
313 4hb9_A Similarities with proba 96.1 0.0032 1.1E-07 55.4 3.6 32 188-219 3-34 (412)
314 1yvv_A Amine oxidase, flavin-c 96.1 0.0039 1.3E-07 53.4 3.7 33 187-219 3-35 (336)
315 3ihm_A Styrene monooxygenase A 96.0 0.0033 1.1E-07 56.1 3.3 34 186-219 22-55 (430)
316 3c85_A Putative glutathione-re 96.0 0.0093 3.2E-07 46.4 5.5 34 7-40 39-73 (183)
317 2g1u_A Hypothetical protein TM 96.0 0.0059 2E-07 46.2 4.3 39 181-219 14-52 (155)
318 3g0o_A 3-hydroxyisobutyrate de 96.0 0.0059 2E-07 51.8 4.7 40 1-40 1-40 (303)
319 3oz2_A Digeranylgeranylglycero 96.0 0.004 1.4E-07 54.4 3.7 32 188-219 6-37 (397)
320 2dpo_A L-gulonate 3-dehydrogen 96.0 0.007 2.4E-07 51.7 5.1 39 1-40 1-39 (319)
321 1rp0_A ARA6, thiazole biosynth 95.9 0.0051 1.8E-07 51.6 3.8 33 187-219 40-73 (284)
322 3rp8_A Flavoprotein monooxygen 95.9 0.0061 2.1E-07 53.9 4.2 35 185-219 22-56 (407)
323 2bry_A NEDD9 interacting prote 95.9 0.0063 2.1E-07 55.5 4.3 35 185-219 91-125 (497)
324 3l6d_A Putative oxidoreductase 95.8 0.013 4.4E-07 49.8 6.0 35 6-40 8-42 (306)
325 3l4b_C TRKA K+ channel protien 95.8 0.0098 3.4E-07 47.7 4.9 32 9-40 2-33 (218)
326 3vrd_B FCCB subunit, flavocyto 95.7 0.0073 2.5E-07 53.2 4.2 38 185-222 1-40 (401)
327 2vou_A 2,6-dihydroxypyridine h 95.7 0.0071 2.4E-07 53.3 4.0 35 186-220 5-39 (397)
328 3dfz_A SIRC, precorrin-2 dehyd 95.7 0.014 4.7E-07 47.1 5.3 34 6-39 30-63 (223)
329 2xdo_A TETX2 protein; tetracyc 95.7 0.0081 2.8E-07 52.9 4.3 34 186-219 26-59 (398)
330 3v76_A Flavoprotein; structura 95.7 0.0066 2.3E-07 54.0 3.7 34 186-219 27-60 (417)
331 4e12_A Diketoreductase; oxidor 95.7 0.012 4.1E-07 49.4 5.0 34 7-40 4-37 (283)
332 3g5s_A Methylenetetrahydrofola 95.6 0.0078 2.7E-07 52.8 3.8 33 187-219 2-34 (443)
333 3alj_A 2-methyl-3-hydroxypyrid 95.6 0.0078 2.7E-07 52.6 3.9 34 186-219 11-44 (379)
334 4dio_A NAD(P) transhydrogenase 95.6 0.012 4.2E-07 51.6 5.0 36 6-41 189-224 (405)
335 1f0y_A HCDH, L-3-hydroxyacyl-C 95.6 0.013 4.5E-07 49.6 5.1 34 7-40 15-48 (302)
336 2oln_A NIKD protein; flavoprot 95.6 0.0082 2.8E-07 52.7 3.9 33 187-219 5-37 (397)
337 3nrn_A Uncharacterized protein 95.6 0.0078 2.7E-07 53.4 3.8 33 187-219 1-33 (421)
338 3dme_A Conserved exported prot 95.6 0.0079 2.7E-07 52.0 3.7 33 187-219 5-37 (369)
339 1pzg_A LDH, lactate dehydrogen 95.6 0.014 4.9E-07 50.1 5.2 34 7-40 9-43 (331)
340 3ktd_A Prephenate dehydrogenas 95.5 0.016 5.4E-07 50.0 5.4 40 1-40 2-41 (341)
341 2iid_A L-amino-acid oxidase; f 95.5 0.0099 3.4E-07 54.0 4.3 35 185-219 32-66 (498)
342 3ka7_A Oxidoreductase; structu 95.5 0.008 2.7E-07 53.3 3.5 32 188-219 2-33 (425)
343 2x5o_A UDP-N-acetylmuramoylala 95.5 0.013 4.5E-07 52.5 4.8 36 7-42 5-40 (439)
344 1ryi_A Glycine oxidase; flavop 95.5 0.0077 2.6E-07 52.5 3.3 33 187-219 18-50 (382)
345 2uzz_A N-methyl-L-tryptophan o 95.5 0.0073 2.5E-07 52.5 3.1 33 187-219 3-35 (372)
346 2gf3_A MSOX, monomeric sarcosi 95.4 0.0097 3.3E-07 52.0 3.6 33 187-219 4-36 (389)
347 3pid_A UDP-glucose 6-dehydroge 95.4 0.014 4.8E-07 51.9 4.6 34 6-40 35-68 (432)
348 3lk7_A UDP-N-acetylmuramoylala 95.4 0.015 5.1E-07 52.3 4.8 35 6-40 8-42 (451)
349 3p2y_A Alanine dehydrogenase/p 95.4 0.013 4.5E-07 51.1 4.3 35 6-40 183-217 (381)
350 1k0i_A P-hydroxybenzoate hydro 95.3 0.0093 3.2E-07 52.3 3.4 33 187-219 3-35 (394)
351 2x3n_A Probable FAD-dependent 95.3 0.01 3.5E-07 52.2 3.6 33 187-219 7-39 (399)
352 3c4a_A Probable tryptophan hyd 95.3 0.01 3.5E-07 52.0 3.6 33 187-219 1-35 (381)
353 1y56_B Sarcosine oxidase; dehy 95.3 0.01 3.5E-07 51.8 3.5 33 187-219 6-38 (382)
354 3cgv_A Geranylgeranyl reductas 95.3 0.011 3.7E-07 51.8 3.7 33 187-219 5-37 (397)
355 3nix_A Flavoprotein/dehydrogen 95.3 0.01 3.5E-07 52.5 3.6 33 187-219 6-38 (421)
356 3hyw_A Sulfide-quinone reducta 95.3 0.018 6.3E-07 51.3 5.1 36 187-222 3-40 (430)
357 1c0p_A D-amino acid oxidase; a 95.3 0.012 4.2E-07 51.0 3.9 33 187-219 7-39 (363)
358 2raf_A Putative dinucleotide-b 95.3 0.02 6.9E-07 45.7 4.8 35 7-41 19-53 (209)
359 1y6j_A L-lactate dehydrogenase 95.3 0.018 6E-07 49.2 4.7 35 6-40 6-42 (318)
360 3dfz_A SIRC, precorrin-2 dehyd 95.2 0.016 5.6E-07 46.6 4.2 37 183-219 28-64 (223)
361 3c96_A Flavin-containing monoo 95.2 0.013 4.5E-07 51.8 3.9 33 187-219 5-38 (410)
362 3i83_A 2-dehydropantoate 2-red 95.2 0.018 6.2E-07 49.2 4.7 33 8-40 3-35 (320)
363 1lld_A L-lactate dehydrogenase 95.2 0.018 6.3E-07 49.0 4.7 35 6-40 6-42 (319)
364 1kyq_A Met8P, siroheme biosynt 95.2 0.013 4.5E-07 48.7 3.6 35 6-40 12-46 (274)
365 3k7m_X 6-hydroxy-L-nicotine ox 95.2 0.011 3.8E-07 52.5 3.5 32 188-219 3-34 (431)
366 1zej_A HBD-9, 3-hydroxyacyl-CO 95.2 0.019 6.4E-07 48.4 4.5 34 6-40 11-44 (293)
367 4gde_A UDP-galactopyranose mut 95.1 0.013 4.5E-07 53.3 3.8 33 187-219 11-44 (513)
368 3nks_A Protoporphyrinogen oxid 95.1 0.012 4E-07 53.1 3.4 33 187-219 3-37 (477)
369 3qha_A Putative oxidoreductase 95.1 0.018 6.2E-07 48.6 4.4 35 7-41 15-49 (296)
370 4ffl_A PYLC; amino acid, biosy 95.1 0.022 7.4E-07 49.5 5.0 34 8-41 2-35 (363)
371 3doj_A AT3G25530, dehydrogenas 95.1 0.022 7.5E-07 48.4 4.9 35 7-41 21-55 (310)
372 2b9w_A Putative aminooxidase; 95.1 0.015 5.1E-07 51.6 4.0 34 186-219 6-40 (424)
373 2gqf_A Hypothetical protein HI 95.1 0.013 4.4E-07 51.8 3.5 33 187-219 5-37 (401)
374 2y0c_A BCEC, UDP-glucose dehyd 95.1 0.019 6.6E-07 51.9 4.7 34 7-40 8-41 (478)
375 1ks9_A KPA reductase;, 2-dehyd 95.1 0.021 7.2E-07 47.7 4.7 33 9-41 2-34 (291)
376 3uox_A Otemo; baeyer-villiger 95.1 0.017 5.9E-07 53.2 4.4 35 7-41 185-219 (545)
377 2gag_B Heterotetrameric sarcos 95.1 0.015 5.1E-07 51.1 3.9 33 187-219 22-56 (405)
378 3dtt_A NADP oxidoreductase; st 95.1 0.024 8.2E-07 46.4 4.9 35 7-41 19-53 (245)
379 3ghy_A Ketopantoate reductase 95.1 0.026 8.8E-07 48.5 5.2 32 8-39 4-35 (335)
380 3qj4_A Renalase; FAD/NAD(P)-bi 95.0 0.012 3.9E-07 50.7 2.9 33 187-219 2-37 (342)
381 3k96_A Glycerol-3-phosphate de 95.0 0.028 9.6E-07 48.8 5.3 34 7-40 29-62 (356)
382 2e1m_A L-glutamate oxidase; L- 95.0 0.019 6.6E-07 50.2 4.3 34 185-218 43-76 (376)
383 3hn2_A 2-dehydropantoate 2-red 95.0 0.02 6.9E-07 48.7 4.3 33 8-40 3-35 (312)
384 4ap3_A Steroid monooxygenase; 95.0 0.018 6.2E-07 53.1 4.3 35 7-41 191-225 (549)
385 3nyc_A D-arginine dehydrogenas 95.0 0.014 4.8E-07 50.7 3.4 33 186-219 9-41 (381)
386 3k6j_A Protein F01G10.3, confi 95.0 0.028 9.6E-07 50.4 5.3 34 7-40 54-87 (460)
387 3dje_A Fructosyl amine: oxygen 94.9 0.017 5.7E-07 51.5 3.8 33 187-219 7-40 (438)
388 3gg2_A Sugar dehydrogenase, UD 94.9 0.023 7.7E-07 51.0 4.7 33 8-40 3-35 (450)
389 2a9f_A Putative malic enzyme ( 94.9 0.023 7.8E-07 49.5 4.5 35 6-40 187-222 (398)
390 4a7p_A UDP-glucose dehydrogena 94.9 0.026 8.7E-07 50.6 4.9 35 7-41 8-42 (446)
391 2ewd_A Lactate dehydrogenase,; 94.9 0.025 8.7E-07 48.2 4.7 34 7-40 4-38 (317)
392 2ew2_A 2-dehydropantoate 2-red 94.9 0.024 8.1E-07 48.0 4.5 33 8-40 4-36 (316)
393 3g3e_A D-amino-acid oxidase; F 94.9 0.017 5.7E-07 49.8 3.6 32 188-219 2-39 (351)
394 3vtf_A UDP-glucose 6-dehydroge 94.9 0.028 9.5E-07 50.1 5.0 35 6-40 20-54 (444)
395 2ivd_A PPO, PPOX, protoporphyr 94.9 0.015 5.2E-07 52.4 3.4 34 186-219 16-49 (478)
396 1kyq_A Met8P, siroheme biosynt 94.9 0.023 7.9E-07 47.3 4.2 36 184-219 11-46 (274)
397 2jae_A L-amino acid oxidase; o 94.9 0.019 6.4E-07 52.0 4.0 34 186-219 11-44 (489)
398 3oj0_A Glutr, glutamyl-tRNA re 94.9 0.013 4.3E-07 43.7 2.4 34 7-40 21-54 (144)
399 3atr_A Conserved archaeal prot 94.8 0.014 4.7E-07 52.5 3.0 33 187-219 7-39 (453)
400 3i6d_A Protoporphyrinogen oxid 94.8 0.011 3.7E-07 53.1 2.3 33 187-219 6-44 (470)
401 3g17_A Similar to 2-dehydropan 94.8 0.028 9.5E-07 47.4 4.7 33 8-40 3-35 (294)
402 2qcu_A Aerobic glycerol-3-phos 94.8 0.017 5.8E-07 52.6 3.5 33 187-219 4-36 (501)
403 2vns_A Metalloreductase steap3 94.8 0.039 1.3E-06 44.2 5.3 34 7-40 28-61 (215)
404 2bcg_G Secretory pathway GDP d 94.8 0.017 5.9E-07 51.9 3.5 33 187-219 12-44 (453)
405 1id1_A Putative potassium chan 94.8 0.03 1E-06 42.1 4.3 34 186-219 3-36 (153)
406 1x13_A NAD(P) transhydrogenase 94.8 0.027 9.2E-07 49.7 4.7 34 7-40 172-205 (401)
407 3pvc_A TRNA 5-methylaminomethy 94.7 0.028 9.5E-07 53.4 5.0 34 186-219 264-297 (689)
408 3g79_A NDP-N-acetyl-D-galactos 94.7 0.025 8.5E-07 51.1 4.4 35 7-41 18-54 (478)
409 3vps_A TUNA, NAD-dependent epi 94.7 0.037 1.3E-06 46.7 5.3 41 1-41 1-42 (321)
410 1vl6_A Malate oxidoreductase; 94.7 0.029 9.9E-07 48.8 4.5 34 6-39 191-225 (388)
411 1t2d_A LDH-P, L-lactate dehydr 94.7 0.036 1.2E-06 47.4 5.1 34 7-40 4-38 (322)
412 3pef_A 6-phosphogluconate dehy 94.7 0.03 1E-06 46.9 4.5 34 8-41 2-35 (287)
413 3c4n_A Uncharacterized protein 94.7 0.02 6.7E-07 50.6 3.5 33 187-219 37-71 (405)
414 2i0z_A NAD(FAD)-utilizing dehy 94.6 0.02 6.8E-07 51.4 3.5 33 187-219 27-59 (447)
415 2rgh_A Alpha-glycerophosphate 94.6 0.02 6.7E-07 53.1 3.5 33 187-219 33-65 (571)
416 3fwz_A Inner membrane protein 94.6 0.036 1.2E-06 41.0 4.4 34 186-219 7-40 (140)
417 3nlc_A Uncharacterized protein 94.6 0.028 9.6E-07 51.7 4.5 34 186-219 107-140 (549)
418 2qa2_A CABE, polyketide oxygen 94.6 0.024 8.1E-07 51.7 4.0 34 186-219 12-45 (499)
419 1l7d_A Nicotinamide nucleotide 94.6 0.036 1.2E-06 48.7 4.9 35 6-40 171-205 (384)
420 3pdu_A 3-hydroxyisobutyrate de 94.6 0.026 8.8E-07 47.4 3.9 34 8-41 2-35 (287)
421 3d1l_A Putative NADP oxidoredu 94.6 0.031 1E-06 46.2 4.3 34 7-40 10-44 (266)
422 3ps9_A TRNA 5-methylaminomethy 94.6 0.029 1E-06 53.1 4.7 33 186-218 272-304 (676)
423 3cp8_A TRNA uridine 5-carboxym 94.6 0.022 7.5E-07 53.2 3.7 34 186-219 21-54 (641)
424 2aef_A Calcium-gated potassium 94.6 0.016 5.6E-07 46.9 2.6 35 6-41 8-42 (234)
425 1z82_A Glycerol-3-phosphate de 94.6 0.034 1.2E-06 47.7 4.7 34 7-40 14-47 (335)
426 2qa1_A PGAE, polyketide oxygen 94.5 0.027 9.1E-07 51.3 4.2 34 186-219 11-44 (500)
427 3ces_A MNMG, tRNA uridine 5-ca 94.5 0.023 7.9E-07 53.2 3.7 33 187-219 29-61 (651)
428 1s3e_A Amine oxidase [flavin-c 94.5 0.021 7.1E-07 52.2 3.5 33 187-219 5-37 (520)
429 2hjr_A Malate dehydrogenase; m 94.5 0.04 1.4E-06 47.2 5.0 34 7-40 14-48 (328)
430 2aqj_A Tryptophan halogenase, 94.5 0.026 9E-07 51.8 4.1 34 186-219 5-41 (538)
431 3ihg_A RDME; flavoenzyme, anth 94.5 0.022 7.6E-07 52.3 3.6 33 187-219 6-38 (535)
432 2bi7_A UDP-galactopyranose mut 94.5 0.025 8.7E-07 49.6 3.8 33 187-219 4-36 (384)
433 1bg6_A N-(1-D-carboxylethyl)-L 94.5 0.036 1.2E-06 47.9 4.7 33 8-40 5-37 (359)
434 1zcj_A Peroxisomal bifunctiona 94.5 0.04 1.4E-06 49.6 5.1 34 7-40 37-70 (463)
435 1rsg_A FMS1 protein; FAD bindi 94.5 0.022 7.5E-07 52.0 3.4 33 187-219 9-42 (516)
436 3e1t_A Halogenase; flavoprotei 94.5 0.023 7.9E-07 51.9 3.6 33 187-219 8-40 (512)
437 4dll_A 2-hydroxy-3-oxopropiona 94.4 0.031 1.1E-06 47.7 4.2 34 7-40 31-64 (320)
438 3mog_A Probable 3-hydroxybutyr 94.4 0.045 1.5E-06 49.5 5.4 34 7-40 5-38 (483)
439 3axb_A Putative oxidoreductase 94.4 0.024 8.2E-07 50.7 3.5 31 187-217 24-55 (448)
440 3i3l_A Alkylhalidase CMLS; fla 94.4 0.029 9.9E-07 52.2 4.0 34 186-219 23-56 (591)
441 2r0c_A REBC; flavin adenine di 94.4 0.025 8.7E-07 52.1 3.6 33 187-219 27-59 (549)
442 2zxi_A TRNA uridine 5-carboxym 94.4 0.026 8.8E-07 52.7 3.6 33 187-219 28-60 (637)
443 1y0p_A Fumarate reductase flav 94.3 0.024 8.4E-07 52.5 3.5 33 187-219 127-159 (571)
444 1jw9_B Molybdopterin biosynthe 94.3 0.035 1.2E-06 45.6 4.1 34 7-40 31-65 (249)
445 4g65_A TRK system potassium up 94.3 0.021 7.1E-07 51.5 2.9 34 7-40 3-36 (461)
446 3da1_A Glycerol-3-phosphate de 94.3 0.028 9.7E-07 52.0 3.9 33 187-219 19-51 (561)
447 2e4g_A Tryptophan halogenase; 94.3 0.033 1.1E-06 51.3 4.4 34 186-219 25-61 (550)
448 3eag_A UDP-N-acetylmuramate:L- 94.3 0.045 1.5E-06 46.9 4.8 35 7-41 4-39 (326)
449 2weu_A Tryptophan 5-halogenase 94.3 0.024 8.2E-07 51.7 3.3 33 187-219 3-38 (511)
450 3fmw_A Oxygenase; mithramycin, 94.3 0.027 9.3E-07 52.2 3.7 33 187-219 50-82 (570)
451 1pjc_A Protein (L-alanine dehy 94.3 0.048 1.6E-06 47.4 5.0 34 7-40 167-200 (361)
452 1sez_A Protoporphyrinogen oxid 94.3 0.029 1E-06 50.9 3.9 34 186-219 13-46 (504)
453 1y56_A Hypothetical protein PH 94.3 0.056 1.9E-06 49.1 5.7 47 92-152 268-314 (493)
454 2v6b_A L-LDH, L-lactate dehydr 94.3 0.043 1.5E-06 46.5 4.6 32 9-40 2-35 (304)
455 3l9w_A Glutathione-regulated p 94.2 0.054 1.9E-06 48.0 5.4 34 7-40 4-37 (413)
456 3llv_A Exopolyphosphatase-rela 94.2 0.034 1.1E-06 41.1 3.4 34 186-219 6-39 (141)
457 2yg5_A Putrescine oxidase; oxi 94.2 0.031 1.1E-06 50.0 3.7 33 187-219 6-38 (453)
458 3hdq_A UDP-galactopyranose mut 94.1 0.033 1.1E-06 49.1 3.7 34 186-219 29-62 (397)
459 3ic5_A Putative saccharopine d 94.1 0.028 9.5E-07 39.8 2.7 34 186-219 5-39 (118)
460 3jsk_A Cypbp37 protein; octame 94.1 0.034 1.2E-06 47.9 3.6 33 187-219 80-114 (344)
461 4huj_A Uncharacterized protein 94.1 0.034 1.2E-06 44.7 3.5 34 7-40 23-57 (220)
462 2uyy_A N-PAC protein; long-cha 94.1 0.069 2.4E-06 45.3 5.6 34 7-40 30-63 (316)
463 1mv8_A GMD, GDP-mannose 6-dehy 94.1 0.035 1.2E-06 49.6 3.8 32 9-40 2-33 (436)
464 3tl2_A Malate dehydrogenase; c 94.1 0.059 2E-06 45.9 5.0 33 7-39 8-41 (315)
465 1qo8_A Flavocytochrome C3 fuma 94.1 0.031 1E-06 51.8 3.6 33 187-219 122-154 (566)
466 2h78_A Hibadh, 3-hydroxyisobut 94.1 0.04 1.4E-06 46.5 4.0 34 7-40 3-36 (302)
467 1lss_A TRK system potassium up 94.1 0.038 1.3E-06 40.4 3.4 33 187-219 5-37 (140)
468 3fpz_A Thiazole biosynthetic e 94.0 0.032 1.1E-06 47.6 3.4 34 186-219 65-100 (326)
469 1i8t_A UDP-galactopyranose mut 94.0 0.036 1.2E-06 48.3 3.8 32 188-219 3-34 (367)
470 3qsg_A NAD-binding phosphogluc 94.0 0.043 1.5E-06 46.7 4.1 33 7-39 24-57 (312)
471 1v0j_A UDP-galactopyranose mut 94.0 0.032 1.1E-06 49.2 3.4 33 187-219 8-41 (399)
472 2gjc_A Thiazole biosynthetic e 94.0 0.034 1.2E-06 47.6 3.4 32 188-219 67-100 (326)
473 2hmt_A YUAA protein; RCK, KTN, 94.0 0.039 1.3E-06 40.5 3.4 35 185-219 5-39 (144)
474 3c24_A Putative oxidoreductase 94.0 0.067 2.3E-06 44.7 5.2 33 8-40 12-45 (286)
475 3hwr_A 2-dehydropantoate 2-red 94.0 0.053 1.8E-06 46.2 4.6 33 6-39 18-50 (318)
476 4e21_A 6-phosphogluconate dehy 93.9 0.055 1.9E-06 47.0 4.7 34 7-40 22-55 (358)
477 4e4t_A Phosphoribosylaminoimid 93.9 0.071 2.4E-06 47.3 5.5 36 6-41 34-69 (419)
478 3phh_A Shikimate dehydrogenase 93.9 0.065 2.2E-06 44.5 4.9 34 7-40 118-151 (269)
479 3gpi_A NAD-dependent epimerase 93.9 0.08 2.7E-06 44.0 5.6 34 8-41 4-37 (286)
480 2pyx_A Tryptophan halogenase; 93.9 0.037 1.3E-06 50.7 3.8 34 186-219 7-52 (526)
481 3lov_A Protoporphyrinogen oxid 93.9 0.034 1.2E-06 50.1 3.4 33 187-219 5-39 (475)
482 2eez_A Alanine dehydrogenase; 93.9 0.063 2.2E-06 46.8 5.0 34 7-40 166-199 (369)
483 3ego_A Probable 2-dehydropanto 93.9 0.055 1.9E-06 45.9 4.5 32 8-40 3-34 (307)
484 2qyt_A 2-dehydropantoate 2-red 93.8 0.034 1.1E-06 47.2 3.1 31 8-38 9-45 (317)
485 2o3j_A UDP-glucose 6-dehydroge 93.8 0.042 1.4E-06 49.7 3.9 33 8-40 10-44 (481)
486 2vvm_A Monoamine oxidase N; FA 93.8 0.035 1.2E-06 50.3 3.4 33 187-219 40-72 (495)
487 2vhw_A Alanine dehydrogenase; 93.8 0.065 2.2E-06 46.9 5.0 35 6-40 167-201 (377)
488 3c85_A Putative glutathione-re 93.8 0.048 1.6E-06 42.2 3.8 36 184-219 37-73 (183)
489 4ezb_A Uncharacterized conserv 93.8 0.05 1.7E-06 46.4 4.1 33 8-40 25-58 (317)
490 3pqe_A L-LDH, L-lactate dehydr 93.8 0.059 2E-06 46.1 4.6 34 7-40 5-40 (326)
491 2pv7_A T-protein [includes: ch 93.8 0.077 2.6E-06 44.7 5.3 33 8-40 22-55 (298)
492 1nyt_A Shikimate 5-dehydrogena 93.8 0.067 2.3E-06 44.4 4.8 34 7-40 119-152 (271)
493 1jay_A Coenzyme F420H2:NADP+ o 93.8 0.066 2.2E-06 42.5 4.6 32 9-40 2-34 (212)
494 4at0_A 3-ketosteroid-delta4-5a 93.8 0.039 1.3E-06 50.3 3.7 33 187-219 42-74 (510)
495 2raf_A Putative dinucleotide-b 93.7 0.048 1.6E-06 43.4 3.6 38 182-219 15-52 (209)
496 3q2o_A Phosphoribosylaminoimid 93.7 0.089 3E-06 46.1 5.7 36 6-41 13-48 (389)
497 1dlj_A UDP-glucose dehydrogena 93.7 0.053 1.8E-06 47.9 4.1 31 9-40 2-32 (402)
498 4gwg_A 6-phosphogluconate dehy 93.7 0.078 2.7E-06 47.9 5.3 34 7-40 4-37 (484)
499 1txg_A Glycerol-3-phosphate de 93.6 0.051 1.8E-06 46.5 3.9 30 9-38 2-31 (335)
500 1guz_A Malate dehydrogenase; o 93.6 0.069 2.3E-06 45.4 4.6 32 9-40 2-35 (310)
No 1
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=100.00 E-value=1.4e-35 Score=274.79 Aligned_cols=208 Identities=22% Similarity=0.414 Sum_probs=184.8
Q ss_pred CCcEEEECCcHHHHHHHHHHh-hCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCC----CCCCCCCCCCHH
Q 022090 7 GVEVIMVGAGTSGLATAACLS-LQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLP----FPSSYPMFVSRA 81 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~-~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 81 (303)
.+||+|||||++|+++|..|+ +.|++|+|+|+++.+||+|..+.|+.+.++.+...+.+...+ .+.+...++++.
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQP 87 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHH
Confidence 479999999999999999999 899999999999999999999899999998887777665331 112334567899
Q ss_pred HHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCCccc
Q 022090 82 QFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCS 161 (303)
Q Consensus 82 ~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~ 161 (303)
++.+|+.+.++++++..+++++++|++++.++..+.|.|.+.++ .+ +.||+||+|||.++.|..|++||++.
T Consensus 88 ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G-------~~-i~ad~lV~AtG~~s~p~~p~ipG~~~ 159 (540)
T 3gwf_A 88 EILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHG-------EV-YRAKYVVNAVGLLSAINFPNLPGLDT 159 (540)
T ss_dssp HHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTS-------CE-EEEEEEEECCCSCCSBCCCCCTTGGG
T ss_pred HHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCC-------CE-EEeCEEEECCcccccCCCCCCCCccc
Confidence 99999999999999866779999999999988667899998765 56 89999999999988999999999999
Q ss_pred cccCCCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeeehhhH
Q 022090 162 FCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREMV 228 (303)
Q Consensus 162 ~~~~~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp~~~~ 228 (303)
| .|..+|+..+.......+++|+|||+|.+|+|+|..|++.+.+||+++|++.|++|..+.
T Consensus 160 f------~g~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~i~p~~~~ 220 (540)
T 3gwf_A 160 F------EGETIHTAAWPEGKSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVGNR 220 (540)
T ss_dssp C------CSEEEEGGGCCSSCCCTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCCEEECCCC
T ss_pred c------CCCEEEeecCCCccccccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCccC
Confidence 9 999999999988777889999999999999999999999999999999999889997654
No 2
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=100.00 E-value=2.5e-35 Score=273.52 Aligned_cols=208 Identities=27% Similarity=0.444 Sum_probs=183.9
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCC----CCCCCCCCCCHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLP----FPSSYPMFVSRAQ 82 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 82 (303)
.+||+|||||++|+++|..|++.|++|+|||+++.+||+|..+.|+.+.++.+...+.++..+ .+.....++++.+
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~e 100 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPE 100 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHHH
T ss_pred CCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHHH
Confidence 469999999999999999999999999999999999999998889999888887777665431 1233456788999
Q ss_pred HHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCCcccc
Q 022090 83 FIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSF 162 (303)
Q Consensus 83 l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~~ 162 (303)
+.+|+.+.++++++..+++++++|++++.++..+.|+|.+.++ .+ +.||+||+|||..+.|..|++||.+.|
T Consensus 101 i~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G-------~~-i~ad~lV~AtG~~s~p~~p~ipG~~~f 172 (549)
T 4ap3_A 101 ILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRG-------DE-VSARFLVVAAGPLSNANTPAFDGLDRF 172 (549)
T ss_dssp HHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTC-------CE-EEEEEEEECCCSEEECCCCCCTTGGGC
T ss_pred HHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCC-------CE-EEeCEEEECcCCCCCCCCCCCCCcccC
Confidence 9999999999999876779999999999988777999998765 57 899999999998889999999999999
Q ss_pred ccCCCCCccEEecccCC-CCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeeehhhH
Q 022090 163 CSSATGTGEVIHSTQYK-NGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREMV 228 (303)
Q Consensus 163 ~~~~~~~g~~~~~~~~~-~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp~~~~ 228 (303)
.|..+|+..+. +...+.+++|+|||+|.+|+|+|..|++.+.+||+++|++.|++|..+.
T Consensus 173 ------~g~~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ilp~~~~ 233 (549)
T 4ap3_A 173 ------TGDIVHTARWPHDGVDFTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANYSIPAGNV 233 (549)
T ss_dssp ------CSEEEEGGGCCTTCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECC--
T ss_pred ------CCceEEeccccccccccCCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCcCC
Confidence 99999999988 5677789999999999999999999999999999999999999998665
No 3
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=100.00 E-value=2.5e-35 Score=273.31 Aligned_cols=209 Identities=23% Similarity=0.372 Sum_probs=180.7
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCC----CCCCCCCCCHH
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPF----PSSYPMFVSRA 81 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 81 (303)
..+||+|||||++|+++|..|++.|++|+|||+++.+||+|..+.|+++.++.+...+.+...+. ......++++.
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~ 87 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQP 87 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHH
Confidence 35799999999999999999999999999999999999999999999998887766655543221 22334677899
Q ss_pred HHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCCccc
Q 022090 82 QFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCS 161 (303)
Q Consensus 82 ~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~ 161 (303)
++.+|+.+.++++++..+++++++|++++.++..+.|.|.+.++ .+ +.||+||+|||..+.|..|++||.+.
T Consensus 88 ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G-------~~-~~ad~lV~AtG~~s~p~~p~ipG~~~ 159 (545)
T 3uox_A 88 EMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNE-------EV-VTCRFLISATGPLSASRMPDIKGIDS 159 (545)
T ss_dssp HHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTT-------EE-EEEEEEEECCCSCBC---CCCTTGGG
T ss_pred HHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCC-------CE-EEeCEEEECcCCCCCCcCCCCCCccc
Confidence 99999999999999877779999999999987677899998765 57 89999999999988999999999999
Q ss_pred cccCCCCCccEEecccCCCC-------CCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeeehhhH
Q 022090 162 FCSSATGTGEVIHSTQYKNG-------KPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREMV 228 (303)
Q Consensus 162 ~~~~~~~~g~~~~~~~~~~~-------~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp~~~~ 228 (303)
| .|..+|+..+... ....+++|+|||+|.+|+|+|..|++.+.+||+++|++.|++|..+.
T Consensus 160 f------~g~~~h~~~~~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~i~p~~~~ 227 (545)
T 3uox_A 160 F------KGESFHSSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNWCTPLGNS 227 (545)
T ss_dssp C------CSEEEEGGGCCBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCCCEECCCC
T ss_pred c------CCCeEEcccccccccccccccccCCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCccccCCcC
Confidence 9 9999999988775 66788999999999999999999999999999999999889987544
No 4
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=100.00 E-value=2.7e-34 Score=267.10 Aligned_cols=208 Identities=24% Similarity=0.432 Sum_probs=179.2
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCC----CCCCCCCCCHH
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPF----PSSYPMFVSRA 81 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 81 (303)
..+||+|||||++|+++|..|++.|++|+|+|+++.+||+|..++|+++.++.+...+.+...+. ......++++.
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 94 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQP 94 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHH
Confidence 35799999999999999999999999999999999999999988899888777666555543220 11223577899
Q ss_pred HHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCCccc
Q 022090 82 QFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCS 161 (303)
Q Consensus 82 ~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~ 161 (303)
++.+|+..+++++++..+++++++|++++.+++.+.|+|.+.++ .+ ++||+||+|||.++.|..|++||++.
T Consensus 95 ~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G-------~~-~~ad~vV~AtG~~s~p~~p~i~G~~~ 166 (542)
T 1w4x_A 95 EILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHG-------DR-IRARYLIMASGQLSVPQLPNFPGLKD 166 (542)
T ss_dssp HHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTC-------CE-EEEEEEEECCCSCCCCCCCCCTTGGG
T ss_pred HHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCC-------CE-EEeCEEEECcCCCCCCCCCCCCCccc
Confidence 99999999999998877789999999999987667899988764 46 89999999999988999999999998
Q ss_pred cccCCCCCccEEecccCC-CCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeeehhh
Q 022090 162 FCSSATGTGEVIHSTQYK-NGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREM 227 (303)
Q Consensus 162 ~~~~~~~~g~~~~~~~~~-~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp~~~ 227 (303)
| .|.++|+..+. +...+.+++|+|||+|.+|+|++..+++.+.+||++.|++.+++|+.+
T Consensus 167 f------~G~~~hs~~~~~~~~~~~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~~~p~~~ 227 (542)
T 1w4x_A 167 F------AGNLYHTGNWPHEPVDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHFAVPARN 227 (542)
T ss_dssp C------CSEEEEGGGCCSSCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECCC
T ss_pred C------CCceEECCCCCCchhccCCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcccccCCC
Confidence 9 99999999887 445678999999999999999999999999999999999988888643
No 5
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=100.00 E-value=1.3e-32 Score=251.13 Aligned_cols=207 Identities=19% Similarity=0.376 Sum_probs=175.0
Q ss_pred CcEEEECCcHHHHHHHHHHhh---CCCC---eEEEecCCCCCCccCcC---------------CCCceEEecCcccccCC
Q 022090 8 VEVIMVGAGTSGLATAACLSL---QSIP---YVILERENCYASIWKKY---------------SYDRLRLHLAKQFCQLP 66 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~---~g~~---v~iie~~~~~gg~w~~~---------------~~~~~~~~~~~~~~~~~ 66 (303)
+||+|||||++|+++|..|++ .|.+ |+|||+++.+||.|.+. .|+.+..+.+...+.++
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 699999999999999999999 9999 99999999999999863 34445555555666666
Q ss_pred CCCCCCC----CCCCCCHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEE
Q 022090 67 HLPFPSS----YPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLV 142 (303)
Q Consensus 67 ~~~~~~~----~~~~~~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vI 142 (303)
+++++.. .+.++++.++.+|+.++++++++..+++++++|++++..++.+.|.|++.++.++ +..+ +.||+||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g--~~~~-~~~d~VV 159 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTD--TIYS-EEFDYVV 159 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTT--EEEE-EEESEEE
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCC--ceEE-EEcCEEE
Confidence 6655432 2677889999999999999999885569999999999887556899998764222 3356 8999999
Q ss_pred EccCCCCCCCCCCCCCccccccCCCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeee
Q 022090 143 VASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHV 222 (303)
Q Consensus 143 lAtG~~~~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~ 222 (303)
+|||.++.|+.|.+||.+.| .|.++|+.++.+...+.+++|+|||+|.+|+|+|..|++.|.+|++++|++ .+
T Consensus 160 vAtG~~s~p~~p~ipG~~~~------~g~~~hs~~~~~~~~~~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~-~~ 232 (464)
T 2xve_A 160 CCTGHFSTPYVPEFEGFEKF------GGRILHAHDFRDALEFKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRT-AP 232 (464)
T ss_dssp ECCCSSSSBCCCCCBTTTTC------CSEEEEGGGCCCGGGGTTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSS-CC
T ss_pred ECCCCCCCCccCCCCCcccC------CceEEehhhhCCHhHcCCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECC-CC
Confidence 99999999999999999988 899999999988767789999999999999999999999999999999987 44
Q ss_pred ee
Q 022090 223 LS 224 (303)
Q Consensus 223 lp 224 (303)
++
T Consensus 233 ~~ 234 (464)
T 2xve_A 233 MG 234 (464)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 6
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.97 E-value=9.8e-31 Score=237.96 Aligned_cols=206 Identities=21% Similarity=0.305 Sum_probs=166.2
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCC--CeEEEecCCCCCCccCcCCC--------------------------------
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSI--PYVILERENCYASIWKKYSY-------------------------------- 51 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~--~v~iie~~~~~gg~w~~~~~-------------------------------- 51 (303)
..+||+|||||++|+++|..|++.|. +|+|||+.+.+||.|.....
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~ 84 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPL 84 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCch
Confidence 45899999999999999999999999 99999999999999986432
Q ss_pred -CceEEecCcccccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCc
Q 022090 52 -DRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGR 130 (303)
Q Consensus 52 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~ 130 (303)
..+..+.+...+.+++++++...+.++++.++.+|+.+++++++. .++++++|++++..+ +.|.|++.+..++
T Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~--~i~~~t~V~~v~~~~--~~~~V~~~~~~~G-- 158 (447)
T 2gv8_A 85 YRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLP--FIKLATDVLDIEKKD--GSWVVTYKGTKAG-- 158 (447)
T ss_dssp CTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGG--GEECSEEEEEEEEET--TEEEEEEEESSTT--
T ss_pred hhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhC--eEEeCCEEEEEEeCC--CeEEEEEeecCCC--
Confidence 112222233344566677777777888999999999999998754 458999999998765 6799988762211
Q ss_pred e-eEEEEeeCEEEEccCCCCCCCCCCCCCccccccCCCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhcc
Q 022090 131 E-IEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHA 209 (303)
Q Consensus 131 ~-~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g 209 (303)
+ ..+ +.||+||+|||+++.|++|.+||.+.|.. ...|.++|+..+.+...+.+++|+|||+|++|+|+|..|++.+
T Consensus 159 ~~~~~-~~~d~VVvAtG~~s~p~~p~i~G~~~~~~--~~~g~v~~~~~~~~~~~~~~k~VvVvG~G~sg~e~A~~l~~~~ 235 (447)
T 2gv8_A 159 SPISK-DIFDAVSICNGHYEVPYIPNIKGLDEYAK--AVPGSVLHSSLFREPELFVGESVLVVGGASSANDLVRHLTPVA 235 (447)
T ss_dssp CCEEE-EEESEEEECCCSSSSBCBCCCBTHHHHHH--HSTTSEEEGGGCCCGGGGTTCCEEEECSSHHHHHHHHHHTTTS
T ss_pred CeeEE-EEeCEEEECCCCCCCCCCCCCCChhhhhc--cCCccEEEecccCChhhcCCCEEEEEccCcCHHHHHHHHHHHh
Confidence 2 237 89999999999888999999999875300 0046789999998877778999999999999999999999999
Q ss_pred Cc-eEEEeecCe
Q 022090 210 AK-TSLVVRSPV 220 (303)
Q Consensus 210 ~~-vt~~~r~~~ 220 (303)
.+ ||+++|++.
T Consensus 236 ~~~V~l~~r~~~ 247 (447)
T 2gv8_A 236 KHPIYQSLLGGG 247 (447)
T ss_dssp CSSEEEECTTCC
T ss_pred CCcEEEEeCCCC
Confidence 99 999999874
No 7
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.97 E-value=2.9e-30 Score=227.45 Aligned_cols=199 Identities=26% Similarity=0.498 Sum_probs=177.4
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
++||+|||||++|+++|..|+++|++|+|+|+++.+||.|... |+.+.+..+...+.++.++.+.....++++.++.+|
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHA-WHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAY 81 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGS-CTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCC-CCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHH
Confidence 3799999999999999999999999999999999999999865 888888888888888888877777788899999999
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEE-EEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCCccccccC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWN-VKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSS 165 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~-v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~~~~~ 165 (303)
+.++++++++.. +++++|++++.++ +.|. |.+.+ .+ +.||+||+|||.++.|..|.+||.+.+
T Consensus 82 l~~~~~~~~~~~--~~~~~v~~i~~~~--~~~~~v~~~~--------g~-~~~d~vV~AtG~~~~~~~~~~~g~~~~--- 145 (357)
T 4a9w_A 82 LAQYEQKYALPV--LRPIRVQRVSHFG--ERLRVVARDG--------RQ-WLARAVISATGTWGEAYTPEYQGLESF--- 145 (357)
T ss_dssp HHHHHHHTTCCE--ECSCCEEEEEEET--TEEEEEETTS--------CE-EEEEEEEECCCSGGGBCCCCCTTGGGC---
T ss_pred HHHHHHHcCCEE--EcCCEEEEEEECC--CcEEEEEeCC--------CE-EEeCEEEECCCCCCCCCCCCCCCcccc---
Confidence 999999999875 8999999999876 6788 77654 36 899999999998888889999999888
Q ss_pred CCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeeehh
Q 022090 166 ATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSRE 226 (303)
Q Consensus 166 ~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp~~ 226 (303)
.+..+|+..+.......+++++|||+|.+|+|+|..|++.+ +|++++|++.+++|..
T Consensus 146 ---~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~~~~~~~~ 202 (357)
T 4a9w_A 146 ---AGIQLHSAHYSTPAPFAGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHEPAFLADD 202 (357)
T ss_dssp ---CSEEEEGGGCCCSGGGTTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSCCCBCCTT
T ss_pred ---CCcEEEeccCCChhhcCCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCCCeecchh
Confidence 88899999998877778899999999999999999999998 6999999965888865
No 8
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.94 E-value=1.6e-26 Score=212.67 Aligned_cols=200 Identities=23% Similarity=0.343 Sum_probs=150.5
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCC--------------CCeEEEecCCCCCCccCcCC-CCceEEecC--cccccCCC--
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQS--------------IPYVILERENCYASIWKKYS-YDRLRLHLA--KQFCQLPH-- 67 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g--------------~~v~iie~~~~~gg~w~~~~-~~~~~~~~~--~~~~~~~~-- 67 (303)
.+||+|||+||+||++|..|.+.| ...+.+|+.+.++ |+..+ +++..++.+ +.+..+.+
T Consensus 39 i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~--Wh~g~~~p~~~~q~~fl~Dlvtl~~P~ 116 (501)
T 4b63_A 39 LHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFA--WHSGMLVPGSKMQISFIKDLATLRDPR 116 (501)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCC--SSGGGCCTTCBCSSCGGGSSSTTTCTT
T ss_pred cCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCC--cCCCCCCCCccccccchhhhccccCCC
Confidence 479999999999999999998754 3567778877665 76543 555554433 12211111
Q ss_pred C---------------CCCCCCCCCCCHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCC------CeEEEEEeecC
Q 022090 68 L---------------PFPSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEAT------NMWNVKASNLL 126 (303)
Q Consensus 68 ~---------------~~~~~~~~~~~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~------~~~~v~~~~~~ 126 (303)
. +++.....|+++.++.+|+++++++++. +++|+++|+++++.+.+ +.|+|++.++.
T Consensus 117 s~~sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~--~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~ 194 (501)
T 4b63_A 117 SSFTFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSD--VVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVE 194 (501)
T ss_dssp CTTSHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGG--GEEESEEEEEEEEECSSTTSSCBCEEEEEEEETT
T ss_pred CccchHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCC--ceEcceEEEeeccccccccccccceEEEEEecCC
Confidence 1 1122335678999999999999998864 45999999999986633 35999998876
Q ss_pred CCCceeEEEEeeCEEEEccCCCCCCCCCCCCCccccccCCCCCccEEecccCCC------CCCCCCCeEEEECCCccHHH
Q 022090 127 SPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKN------GKPYGGKNVLVVGSGNSGME 200 (303)
Q Consensus 127 ~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~------~~~~~~~~v~ViG~G~~g~e 200 (303)
++ +..+ +.|+.||+||| ..|.+| +...+ .|.++|+.+|.. ...+++|+|+|||+|+||+|
T Consensus 195 ~g--~~~~-~~ar~vVlatG--~~P~iP---~~~~~------~g~v~Hss~y~~~~~~~~~~~~~gKrV~VVG~G~SA~e 260 (501)
T 4b63_A 195 TG--EISA-RRTRKVVIAIG--GTAKMP---SGLPQ------DPRIIHSSKYCTTLPALLKDKSKPYNIAVLGSGQSAAE 260 (501)
T ss_dssp TC--CEEE-EEEEEEEECCC--CEECCC---TTSCC------CTTEEEGGGHHHHHHHHSCCTTSCCEEEEECCSHHHHH
T ss_pred Cc--eEEE-EEeCEEEECcC--CCCCCC---CCCCC------CcceeeccccccchhhccccccCCcEEEEECCcHHHHH
Confidence 55 4467 89999999999 555544 44556 788999999864 45678999999999999999
Q ss_pred HHHHHhhc--cCceEEEeecCeeeeeh
Q 022090 201 IALDLANH--AAKTSLVVRSPVHVLSR 225 (303)
Q Consensus 201 ~a~~l~~~--g~~vt~~~r~~~~~lp~ 225 (303)
++.+|++. +.+|+++.|++ ++.|.
T Consensus 261 i~~~L~~~~~~~~v~~~~R~~-~~~p~ 286 (501)
T 4b63_A 261 IFHDLQKRYPNSRTTLIMRDS-AMRPS 286 (501)
T ss_dssp HHHHHHHHSTTCEEEEECSSS-SCCBC
T ss_pred HHHHHHhcCCCceEEEEeCCC-ccccc
Confidence 99999876 67899999998 55554
No 9
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.93 E-value=7.7e-26 Score=196.12 Aligned_cols=178 Identities=17% Similarity=0.271 Sum_probs=128.0
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCc-CCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 85 (303)
.|||+||||||||++||..|+++|++|+|||++. +||.+.+ .+.+ .++.+ ......++..
T Consensus 6 ~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~-~gG~~~~~~~i~-----------~~p~~-------~~~~~~~~~~ 66 (312)
T 4gcm_A 6 DFDIAIIGAGPAGMTAAVYASRANLKTVMIERGI-PGGQMANTEEVE-----------NFPGF-------EMITGPDLST 66 (312)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTGGGGGCSCBC-----------CSTTC-------SSBCHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCC-CCCeeecccccC-----------CcCCc-------cccchHHHHH
Confidence 5899999999999999999999999999999975 5554332 2111 11111 1234566777
Q ss_pred HHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCCccccccC
Q 022090 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSS 165 (303)
Q Consensus 86 ~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~~~~~ 165 (303)
.......+..... ..+..+....... .. +...++ .+ ++||+||+||| +.|+.|++||.+.+
T Consensus 67 ~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~-~~~~~~-------~~-~~~d~liiAtG--s~~~~~~ipG~~~~--- 127 (312)
T 4gcm_A 67 KMFEHAKKFGAVY--QYGDIKSVEDKGE---YK-VINFGN-------KE-LTAKAVIIATG--AEYKKIGVPGEQEL--- 127 (312)
T ss_dssp HHHHHHHHTTCEE--EECCCCEEEECSS---CE-EEECSS-------CE-EEEEEEEECCC--EEECCCCCTTTTTT---
T ss_pred HHHHHHhhccccc--cceeeeeeeeeec---ce-eeccCC-------eE-EEeceeEEccc--CccCcCCCCChhhh---
Confidence 6666666665433 4444343333222 22 233322 57 89999999999 88999999998877
Q ss_pred CCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeeehh
Q 022090 166 ATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSRE 226 (303)
Q Consensus 166 ~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp~~ 226 (303)
.+..+++....+.....+++++|||+|++|+|+|..|++.|.+||+++|++ .++|..
T Consensus 128 ---~~~~v~~~~~~~~~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~~~~~ 184 (312)
T 4gcm_A 128 ---GGRGVSYCAVCDGAFFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRD-ELRAQR 184 (312)
T ss_dssp ---BTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS-SCCSCH
T ss_pred ---CCccEEeeeccCccccCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeccc-ccCcch
Confidence 666566655555455678999999999999999999999999999999998 666653
No 10
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.93 E-value=6.9e-26 Score=197.67 Aligned_cols=190 Identities=18% Similarity=0.334 Sum_probs=150.5
Q ss_pred CCCCCCCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCH
Q 022090 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSR 80 (303)
Q Consensus 1 M~~~~~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (303)
|......+||+|||||++|+++|..|++.|++|+|+|+++.+||.|... |+...+. .++.++ ..+.
T Consensus 1 M~~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~-~~~~~~~------~~~~~~-------~~~~ 66 (332)
T 3lzw_A 1 MREDTKVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSAL-YPEKYIY------DVAGFP-------KIRA 66 (332)
T ss_dssp CEEEEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHH-CTTSEEC------CSTTCS-------SEEH
T ss_pred CCCCCccceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhc-CCCceEe------ccCCCC-------CCCH
Confidence 4333345799999999999999999999999999999999999999542 3333221 111111 1246
Q ss_pred HHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCC-CCCCCCCCCc
Q 022090 81 AQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETT-NPFTPDIRGL 159 (303)
Q Consensus 81 ~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~-~p~~p~~~g~ 159 (303)
.++..++.++++++++.. +++++|++++... .+.|.|.+.+ .+ +.||+||+|||..+ .|..|.+||.
T Consensus 67 ~~~~~~~~~~~~~~~~~~--~~~~~v~~i~~~~-~~~~~v~~~~--------g~-~~~d~vVlAtG~~~~~p~~~~~~g~ 134 (332)
T 3lzw_A 67 QELINNLKEQMAKFDQTI--CLEQAVESVEKQA-DGVFKLVTNE--------ET-HYSKTVIITAGNGAFKPRKLELENA 134 (332)
T ss_dssp HHHHHHHHHHHTTSCCEE--ECSCCEEEEEECT-TSCEEEEESS--------EE-EEEEEEEECCTTSCCEECCCCCTTG
T ss_pred HHHHHHHHHHHHHhCCcE--EccCEEEEEEECC-CCcEEEEECC--------CE-EEeCEEEECCCCCcCCCCCCCCCCh
Confidence 889999999998887554 8899999998876 2479998876 46 79999999999533 7888999999
Q ss_pred cccccCCCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeee
Q 022090 160 CSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLS 224 (303)
Q Consensus 160 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp 224 (303)
+.| .+..+|+ .+.+...+.+++++|||+|.+|+|+|..|.+.+.+|++++|.+ .+.+
T Consensus 135 ~~~------~g~~~~~-~~~~~~~~~~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~-~~~~ 191 (332)
T 3lzw_A 135 EQY------EGKNLHY-FVDDLQKFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRD-KFRA 191 (332)
T ss_dssp GGG------BTTTEES-SCSCGGGGBTCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSS-SCSS
T ss_pred hhc------cCceEEE-ecCCHHHcCCCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecC-cCCc
Confidence 887 6666777 5655555678999999999999999999999999999999998 4433
No 11
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.92 E-value=4.8e-25 Score=191.04 Aligned_cols=181 Identities=15% Similarity=0.236 Sum_probs=130.3
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
.|||+||||||||++||..|+++|++|+|||+....|.++....+....+ ..++ .++...+..++.++
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~~~~i------~~~~------g~~~~i~~~~l~~~ 71 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTII------ENFP------GFPNGIDGNELMMN 71 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGGSSEE------CCST------TCTTCEEHHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCChHHh------hhcc------CCcccCCHHHHHHH
Confidence 58999999999999999999999999999999864333322111111111 1111 12334467789999
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCCccccccCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSSA 166 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~~~~~~ 166 (303)
+.+.+++++... ....+....... ..+.+.+.++ .+ +.||+||+||| +.|+.|++||.+.+
T Consensus 72 ~~~~~~~~~~~~---~~~~v~~~~~~~--~~~~~~~~~~-------~~-~~~~~liiATG--~~~~~~~ipG~~~~---- 132 (314)
T 4a5l_A 72 MRTQSEKYGTTI---ITETIDHVDFST--QPFKLFTEEG-------KE-VLTKSVIIATG--ATAKRMHVPGEDKY---- 132 (314)
T ss_dssp HHHHHHHTTCEE---ECCCEEEEECSS--SSEEEEETTC-------CE-EEEEEEEECCC--EEECCCCCTTHHHH----
T ss_pred HHHHHhhcCcEE---EEeEEEEeecCC--CceEEEECCC-------eE-EEEeEEEEccc--ccccccCCCccccc----
Confidence 999998887653 334455554433 4455555543 57 89999999999 78889999998766
Q ss_pred CCCccEEecccCCCC--CCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCe
Q 022090 167 TGTGEVIHSTQYKNG--KPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPV 220 (303)
Q Consensus 167 ~~~g~~~~~~~~~~~--~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~ 220 (303)
.+..++...+... ....+++++|||+|.+|+|+|..|+++|.+||+++|.+.
T Consensus 133 --~~~~~~~~~~~~~~~~~~~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~ 186 (314)
T 4a5l_A 133 --WQNGVSACAICDGAVPIFRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDA 186 (314)
T ss_dssp --BTTTEESCHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred --cccceeeehhhhhhhhhcCCCeEEEECCChHHHHHHHHHHHhCCeeeeeccccc
Confidence 5544555444332 234679999999999999999999999999999999873
No 12
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.92 E-value=9.2e-25 Score=191.03 Aligned_cols=185 Identities=22% Similarity=0.378 Sum_probs=141.5
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHH
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 85 (303)
.++||+|||||++|+++|..|++.|++|+|||+++..||.|... ++...+ ..++.++ .....++.+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~-~~~~~~------~~~~~~~-------~~~~~~~~~ 69 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTAL-YPEKYI------YDVAGFP-------KVYAKDLVK 69 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHT-CTTSEE------CCSTTCS-------SEEHHHHHH
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeecc-CCCcee------eccCCCC-------CCCHHHHHH
Confidence 35799999999999999999999999999999999999988643 332211 1111111 134678889
Q ss_pred HHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCC-CCCCCCCCCcccccc
Q 022090 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETT-NPFTPDIRGLCSFCS 164 (303)
Q Consensus 86 ~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~-~p~~p~~~g~~~~~~ 164 (303)
++.+.++++++.. +++++|++++.++ +.|.|.+.++ .+ +.||+||+|||..+ .|..|+++|.+.+
T Consensus 70 ~l~~~~~~~~~~~--~~~~~v~~i~~~~--~~~~v~~~~g-------~~-~~~~~lv~AtG~~~~~p~~~~i~g~~~~-- 135 (335)
T 2zbw_A 70 GLVEQVAPFNPVY--SLGERAETLEREG--DLFKVTTSQG-------NA-YTAKAVIIAAGVGAFEPRRIGAPGEREF-- 135 (335)
T ss_dssp HHHHHHGGGCCEE--EESCCEEEEEEET--TEEEEEETTS-------CE-EEEEEEEECCTTSEEEECCCCCTTTTTT--
T ss_pred HHHHHHHHcCCEE--EeCCEEEEEEECC--CEEEEEECCC-------CE-EEeCEEEECCCCCCCCCCCCCCCChhhc--
Confidence 9998888888654 8899999998876 4788877653 46 89999999999543 5778888888766
Q ss_pred CCCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeee
Q 022090 165 SATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLS 224 (303)
Q Consensus 165 ~~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp 224 (303)
.+..++.. +.+.....+++++|||+|.+|+|+|..|++.|.+|++++|++ .+++
T Consensus 136 ----~~~~~~~~-~~~~~~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~-~~~~ 189 (335)
T 2zbw_A 136 ----EGRGVYYA-VKSKAEFQGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRP-QFRA 189 (335)
T ss_dssp ----BTTTEESS-CSCGGGGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS-SCCS
T ss_pred ----cCcEEEEe-cCchhhcCCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCC-ccCc
Confidence 54333332 223334568999999999999999999999999999999998 4444
No 13
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.92 E-value=1.6e-24 Score=188.89 Aligned_cols=177 Identities=20% Similarity=0.334 Sum_probs=136.8
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
.+||+|||||++|+++|..|++.|++|+|+|++ ..||.|..... ...++. ++...++.++.++
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~----------~~~~~~------~~~~~~~~~~~~~ 70 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAWSEE----------VENFPG------FPEPIAGMELAQR 70 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGCSC----------BCCSTT------CSSCBCHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCcccccccc----------cccCCC------CCCCCCHHHHHHH
Confidence 579999999999999999999999999999998 68888764210 001111 1223467789999
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCC-eEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCCccccccC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATN-MWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSS 165 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~-~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~~~~~ 165 (303)
+.+.++++++.. ++ .+|++++.....+ .|.|...++ .+ +.||+||+||| +.|..|.+||.+.+
T Consensus 71 l~~~~~~~gv~~--~~-~~v~~i~~~~~~~~~~~v~~~~g-------~~-~~~~~vv~AtG--~~~~~~~i~g~~~~--- 134 (325)
T 2q7v_A 71 MHQQAEKFGAKV--EM-DEVQGVQHDATSHPYPFTVRGYN-------GE-YRAKAVILATG--ADPRKLGIPGEDNF--- 134 (325)
T ss_dssp HHHHHHHTTCEE--EE-CCEEEEEECTTSSSCCEEEEESS-------CE-EEEEEEEECCC--EEECCCCCTTTTTT---
T ss_pred HHHHHHHcCCEE--Ee-eeEEEEEeccCCCceEEEEECCC-------CE-EEeCEEEECcC--CCcCCCCCCChhhc---
Confidence 999999988765 55 5888888762112 377777654 46 89999999999 67788889998776
Q ss_pred CCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 166 ATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 166 ~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
.+..+|+..+.+.....+++++|||+|.+|+|+|..|.+.+.+||+++|++
T Consensus 135 ---~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 185 (325)
T 2q7v_A 135 ---WGKGVSTCATCDGFFYKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRD 185 (325)
T ss_dssp ---BTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred ---cCceEEEeccCCHHHcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCC
Confidence 555566544433344567999999999999999999999999999999998
No 14
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.92 E-value=1.1e-24 Score=189.11 Aligned_cols=177 Identities=16% Similarity=0.232 Sum_probs=140.6
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
++||+|||||++|+++|..|++.|++|+|+|++ .||.|..... ...++.+ ......++.++
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~~~~----------~~~~~~~-------~~~~~~~~~~~ 75 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTEAGI----------VDDYLGL-------IEIQASDMIKV 75 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGGCCE----------ECCSTTS-------TTEEHHHHHHH
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeeccccc----------ccccCCC-------CCCCHHHHHHH
Confidence 469999999999999999999999999999998 8888875200 0011111 11456789999
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCCccccccCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSSA 166 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~~~~~~ 166 (303)
+.+++++++++. ++ ++|++++.++ +.|.+.+.++ .+ +.||+||+||| +.|..|.+||.+.+
T Consensus 76 ~~~~~~~~~v~~--~~-~~v~~i~~~~--~~~~v~~~~g-------~~-~~~d~lvlAtG--~~~~~~~i~g~~~~---- 136 (323)
T 3f8d_A 76 FNKHIEKYEVPV--LL-DIVEKIENRG--DEFVVKTKRK-------GE-FKADSVILGIG--VKRRKLGVPGEQEF---- 136 (323)
T ss_dssp HHHHHHTTTCCE--EE-SCEEEEEEC----CEEEEESSS-------CE-EEEEEEEECCC--CEECCCCCTTTTTT----
T ss_pred HHHHHHHcCCEE--EE-EEEEEEEecC--CEEEEEECCC-------CE-EEcCEEEECcC--CCCccCCCCchhhh----
Confidence 999999988776 66 8899998765 5688888764 46 89999999999 66888899998877
Q ss_pred CCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeee
Q 022090 167 TGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLS 224 (303)
Q Consensus 167 ~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp 224 (303)
.+..+|...+.+.....+++++|||+|.+|+|+|..|.+.+.+|++++|.+ .+++
T Consensus 137 --~~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~-~~~~ 191 (323)
T 3f8d_A 137 --AGRGISYCSVADAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRD-TFKA 191 (323)
T ss_dssp --BTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSS-SCCS
T ss_pred --cCCceEEeccCCHhHcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCC-CCCc
Confidence 666666555544455678999999999999999999999999999999998 5554
No 15
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.92 E-value=3.4e-24 Score=195.70 Aligned_cols=201 Identities=23% Similarity=0.389 Sum_probs=141.9
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCC-----CCeEEEecCCCCCCccCcCCC-CceEEecC--cccccC--CCCCC------
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQS-----IPYVILERENCYASIWKKYSY-DRLRLHLA--KQFCQL--PHLPF------ 70 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g-----~~v~iie~~~~~gg~w~~~~~-~~~~~~~~--~~~~~~--~~~~~------ 70 (303)
.+||+|||||++|+++|..|++.| .+|+|||+++.+| |....+ +...+..+ ..+..+ +..++
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g--~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l 107 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYR--WHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYL 107 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCC--SSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCC--CcCCCCCCCCcCCcchhhccccccCCCCCCChhHhh
Confidence 469999999999999999999999 9999999999887 655433 22111100 000000 00000
Q ss_pred ---------CCCCCCCCCHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCC-CCeE--EEEEeecCCCCceeEEEEee
Q 022090 71 ---------PSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEA-TNMW--NVKASNLLSPGREIEEYYSG 138 (303)
Q Consensus 71 ---------~~~~~~~~~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~-~~~~--~v~~~~~~~~~~~~~~~~~a 138 (303)
+.....++++.++.+|+.+++++++... +++++|++++.++. .+.| .|.+.++.+ +..+ +.|
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i--~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g---~~~~-~~~ 181 (463)
T 3s5w_A 108 HKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQS--RYGEEVLRIEPMLSAGQVEALRVISRNADG---EELV-RTT 181 (463)
T ss_dssp HHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTE--EESEEEEEEEEEEETTEEEEEEEEEEETTS---CEEE-EEE
T ss_pred hhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeE--EeCCEEEEEEEecCCCceEEEEEEEecCCC---ceEE-EEe
Confidence 0111245678999999999999888655 99999999988632 2445 666665432 2247 899
Q ss_pred CEEEEccCCCCCCCCCCCCCccccccCCCCCc--cEEecccCCCC-CCC-----CCCeEEEECCCccHHHHHHHHhhc--
Q 022090 139 RFLVVASGETTNPFTPDIRGLCSFCSSATGTG--EVIHSTQYKNG-KPY-----GGKNVLVVGSGNSGMEIALDLANH-- 208 (303)
Q Consensus 139 d~vIlAtG~~~~p~~p~~~g~~~~~~~~~~~g--~~~~~~~~~~~-~~~-----~~~~v~ViG~G~~g~e~a~~l~~~-- 208 (303)
|+||+||| +.|.+|.. .+.+ .+ .++|+..+... ..+ .+++|+|||+|.+|+|+|..|++.
T Consensus 182 d~lVlAtG--~~p~~p~~--~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~sg~e~a~~l~~~~~ 251 (463)
T 3s5w_A 182 RALVVSPG--GTPRIPQV--FRAL------KGDGRVFHHSQYLEHMAKQPCSSGKPMKIAIIGGGQSAAEAFIDLNDSYP 251 (463)
T ss_dssp SEEEECCC--CEECCCGG--GGGG------TTCTTEEEGGGHHHHHCC-------CEEEEEECCSHHHHHHHHHHHHHCT
T ss_pred CEEEECCC--CCCCCcch--hhhc------CCCCcEEECHHHHhhHHHhhhcccCCCeEEEECCCHhHHHHHHHHHhcCC
Confidence 99999999 56766652 3344 44 67888776542 222 589999999999999999999999
Q ss_pred cCceEEEeecCeeeeehh
Q 022090 209 AAKTSLVVRSPVHVLSRE 226 (303)
Q Consensus 209 g~~vt~~~r~~~~~lp~~ 226 (303)
+.+||+++|++ .++|..
T Consensus 252 ~~~Vt~v~r~~-~~~p~~ 268 (463)
T 3s5w_A 252 SVQADMILRAS-ALKPAD 268 (463)
T ss_dssp TEEEEEECSSS-SCCBCC
T ss_pred CCeEEEEEeCC-CCcCcc
Confidence 89999999999 577754
No 16
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.92 E-value=6.2e-24 Score=188.16 Aligned_cols=187 Identities=20% Similarity=0.315 Sum_probs=134.1
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCC-CeEEEecCCCCCCccCcCCCCceEEecCc---ccccCCCCCC--CCC------C
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSI-PYVILERENCYASIWKKYSYDRLRLHLAK---QFCQLPHLPF--PSS------Y 74 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~-~v~iie~~~~~gg~w~~~~~~~~~~~~~~---~~~~~~~~~~--~~~------~ 74 (303)
.+||+|||||++|+++|..|++.|. +|+|||+++ +||.|...... .....+. ..+.+..+.. +.. .
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 81 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHWPKS-TRTITPSFTSNGFGMPDMNAISMDTSPAFTFN 81 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTSCTT-CBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHC
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccCccc-ccccCcchhcccCCchhhhhcccccccccccc
Confidence 4799999999999999999999999 999999998 99988643111 1111111 0111111110 111 1
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCC
Q 022090 75 PMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTP 154 (303)
Q Consensus 75 ~~~~~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p 154 (303)
..++++.++..|+.++++++++.. +++++|++++.++ +.|.|.+.+ .+ +.||+||+|||..+.|
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~gv~i--~~~~~v~~i~~~~--~~~~v~~~~--------g~-~~~d~vVlAtG~~~~p--- 145 (369)
T 3d1c_A 82 EEHISGETYAEYLQVVANHYELNI--FENTVVTNISADD--AYYTIATTT--------ET-YHADYIFVATGDYNFP--- 145 (369)
T ss_dssp CSSCBHHHHHHHHHHHHHHTTCEE--ECSCCEEEEEECS--SSEEEEESS--------CC-EEEEEEEECCCSTTSB---
T ss_pred ccCCCHHHHHHHHHHHHHHcCCeE--EeCCEEEEEEECC--CeEEEEeCC--------CE-EEeCEEEECCCCCCcc---
Confidence 235677889999999999888765 8899999998865 468887754 25 7899999999965444
Q ss_pred CCCCccccccCCCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeee
Q 022090 155 DIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVL 223 (303)
Q Consensus 155 ~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~l 223 (303)
.+|+ .. .+|+..+.....+.+++|+|||+|.+|+|+|..|.+.|.+||+++|++ .++
T Consensus 146 ~ip~-~~----------~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~-~~~ 202 (369)
T 3d1c_A 146 KKPF-KY----------GIHYSEIEDFDNFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTT-GLN 202 (369)
T ss_dssp CCCS-SS----------CEEGGGCSCGGGSCSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC------
T ss_pred CCCC-Cc----------eechhhcCChhhcCCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCC-CCC
Confidence 4444 22 367777766555567899999999999999999999999999999998 444
No 17
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.91 E-value=2.3e-24 Score=186.62 Aligned_cols=174 Identities=21% Similarity=0.339 Sum_probs=136.3
Q ss_pred CcEEEECCcHHHHHHHHHHhhCCC-CeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 8 VEVIMVGAGTSGLATAACLSLQSI-PYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~g~-~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
+||+|||||++|+++|..|++.|+ +|+|+|++ ..||.|..... ...++. ++...++.++.++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~~~~~~----------~~~~~~------~~~~~~~~~~~~~ 64 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQITGSSE----------IENYPG------VKEVVSGLDFMQP 64 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGGGGCSC----------BCCSTT------CCSCBCHHHHHHH
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCcccccccc----------cccCCC------CcccCCHHHHHHH
Confidence 699999999999999999999999 99999995 57777754210 001111 1234567889999
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCCccccccCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSSA 166 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~~~~~~ 166 (303)
+.+.+++++++. ++ ++|++++.++ +.|.|.+.++ .+ +.||+||+||| +.|..|++||.+.|
T Consensus 65 l~~~~~~~~v~~--~~-~~v~~i~~~~--~~~~v~~~~g-------~~-~~~~~vv~AtG--~~~~~~~~~g~~~~---- 125 (311)
T 2q0l_A 65 WQEQCFRFGLKH--EM-TAVQRVSKKD--SHFVILAEDG-------KT-FEAKSVIIATG--GSPKRTGIKGESEY---- 125 (311)
T ss_dssp HHHHHHTTSCEE--EC-SCEEEEEEET--TEEEEEETTS-------CE-EEEEEEEECCC--EEECCCCCBTHHHH----
T ss_pred HHHHHHHcCCEE--EE-EEEEEEEEcC--CEEEEEEcCC-------CE-EECCEEEECCC--CCCCCCCCCChhhc----
Confidence 999998887664 55 7899998865 5688877553 46 89999999999 67788899998766
Q ss_pred CCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 167 TGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 167 ~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
.+..+|+....+.....+++++|||+|.+|+|+|..|.+.|.+||+++|++
T Consensus 126 --~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 176 (311)
T 2q0l_A 126 --WGKGVSTCATCDGFFYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRD 176 (311)
T ss_dssp --BTTTEESCHHHHGGGGTTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSS
T ss_pred --cCCcEEEeecCChhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCC
Confidence 555555544433334567999999999999999999999999999999988
No 18
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.91 E-value=9.8e-25 Score=190.80 Aligned_cols=183 Identities=16% Similarity=0.240 Sum_probs=141.5
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecC----CCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERE----NCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQ 82 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~----~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (303)
++||+|||||++|+++|..|++.|++|+|||+. ...||.|.... ....++ .++.+.+..+
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~----------~~~~~~------~~~~~~~~~~ 85 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTT----------EIENFP------GFPDGLTGSE 85 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSS----------EECCST------TCTTCEEHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccch----------hhcccC------CCcccCCHHH
Confidence 579999999999999999999999999999994 47888886431 011111 1233456789
Q ss_pred HHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCCcccc
Q 022090 83 FIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSF 162 (303)
Q Consensus 83 l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~~ 162 (303)
+.+++.++++++++.. ++++ |++++.+. +.|.+.+.....+ .. +.+|+||+||| +.|..|.+||.+.+
T Consensus 86 ~~~~~~~~~~~~gv~i--~~~~-v~~i~~~~--~~~~v~~~~~~~~----~~-~~~d~vvlAtG--~~~~~~~~~g~~~~ 153 (338)
T 3itj_A 86 LMDRMREQSTKFGTEI--ITET-VSKVDLSS--KPFKLWTEFNEDA----EP-VTTDAIILATG--ASAKRMHLPGEETY 153 (338)
T ss_dssp HHHHHHHHHHHTTCEE--ECSC-EEEEECSS--SSEEEEETTCSSS----CC-EEEEEEEECCC--EEECCCCCTTHHHH
T ss_pred HHHHHHHHHHHcCCEE--EEeE-EEEEEEcC--CEEEEEEEecCCC----cE-EEeCEEEECcC--CCcCCCCCCCchhc
Confidence 9999999999998765 7887 88887765 6688877422211 46 89999999999 67888899998776
Q ss_pred ccCCCCCccEEecccCCCCC--CCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeee
Q 022090 163 CSSATGTGEVIHSTQYKNGK--PYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLS 224 (303)
Q Consensus 163 ~~~~~~~g~~~~~~~~~~~~--~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp 224 (303)
.+..++........ ...+++++|||+|.+|+|+|..|.+.+.+|++++|.+ .+++
T Consensus 154 ------~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~-~~~~ 210 (338)
T 3itj_A 154 ------WQKGISACAVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKD-HLRA 210 (338)
T ss_dssp ------BTTTEESCHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS-SCCS
T ss_pred ------cCccEEEchhcccchhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC-ccCC
Confidence 55555554433323 4568999999999999999999999999999999998 4444
No 19
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.91 E-value=4.1e-24 Score=188.91 Aligned_cols=185 Identities=19% Similarity=0.315 Sum_probs=140.9
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
.+||+|||||++|+++|..|++.|++|+|||+.+.+||.|... ++.... +..+.++ .....++.++
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~-~~~~~~------~~~~~~~-------~~~~~~~~~~ 79 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAAL-YPEKHI------YDVAGFP-------EVPAIDLVES 79 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHT-CTTSEE------CCSTTCS-------SEEHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccc-CCCccc------ccCCCCC-------CCCHHHHHHH
Confidence 4799999999999999999999999999999999999988643 322211 1111111 1246788899
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCC-CCCCCCCCC-cccccc
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETT-NPFTPDIRG-LCSFCS 164 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~-~p~~p~~~g-~~~~~~ 164 (303)
+.+.++.+++.. +++++|++++..+ .+.|.|.+.++ .+ +.||+||+|||..+ .|..|+++| .+.+
T Consensus 80 l~~~~~~~~~~~--~~~~~v~~i~~~~-~~~~~v~~~~g-------~~-~~~~~li~AtG~~~~~~~~~~i~g~~~~~-- 146 (360)
T 3ab1_A 80 LWAQAERYNPDV--VLNETVTKYTKLD-DGTFETRTNTG-------NV-YRSRAVLIAAGLGAFEPRKLPQLGNIDHL-- 146 (360)
T ss_dssp HHHHHHTTCCEE--ECSCCEEEEEECT-TSCEEEEETTS-------CE-EEEEEEEECCTTCSCCBCCCGGGCCCTTT--
T ss_pred HHHHHHHhCCEE--EcCCEEEEEEECC-CceEEEEECCC-------cE-EEeeEEEEccCCCcCCCCCCCCCCchhhC--
Confidence 999888887654 8899999998865 23688887654 46 89999999999654 677778888 6666
Q ss_pred CCCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeee
Q 022090 165 SATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLS 224 (303)
Q Consensus 165 ~~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp 224 (303)
.+..++.. +.+...+.+++++|||+|.+|+|+|..|.+.+.+|++++|++ .+++
T Consensus 147 ----~~~~v~~~-~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~-~~~~ 200 (360)
T 3ab1_A 147 ----TGSSVYYA-VKSVEDFKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGH-EFQG 200 (360)
T ss_dssp ----BTTTEESS-CSCGGGGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS-SCSS
T ss_pred ----cCceEEEe-cCCHHHcCCCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC-CCCC
Confidence 55434432 233334568999999999999999999999999999999988 4443
No 20
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.91 E-value=8.1e-24 Score=183.17 Aligned_cols=177 Identities=21% Similarity=0.325 Sum_probs=139.7
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEE-EecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHH
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVI-LERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~i-ie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 84 (303)
.++||+|||||++|+++|..|++.|++|++ +|+ +.+||.|..... ...++ .++...+..++.
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~~~~----------~~~~~------~~~~~~~~~~~~ 65 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITSSSE----------IENYP------GVAQVMDGISFM 65 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGGCSC----------BCCST------TCCSCBCHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeeeece----------eccCC------CCCCCCCHHHHH
Confidence 457999999999999999999999999999 999 667888864311 00111 112345778999
Q ss_pred HHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCCcccccc
Q 022090 85 EHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCS 164 (303)
Q Consensus 85 ~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~~~~ 164 (303)
.++.++++++++.. +++ +|+++ .++..+.|.+..... .+ +.||+||+||| +.|..|.+||.+.+
T Consensus 66 ~~~~~~~~~~~v~~--~~~-~v~~i-~~~~~~~~~v~~~~~-------~~-~~~d~lvlAtG--~~~~~~~~~g~~~~-- 129 (315)
T 3r9u_A 66 APWSEQCMRFGLKH--EMV-GVEQI-LKNSDGSFTIKLEGG-------KT-ELAKAVIVCTG--SAPKKAGFKGEDEF-- 129 (315)
T ss_dssp HHHHHHHTTTCCEE--ECC-CEEEE-EECTTSCEEEEETTS-------CE-EEEEEEEECCC--EEECCCCCBTTTTT--
T ss_pred HHHHHHHHHcCcEE--EEE-EEEEE-ecCCCCcEEEEEecC-------CE-EEeCEEEEeeC--CCCCCCCCCChhhc--
Confidence 99999999988764 666 78888 554335687644432 26 89999999999 67888899998877
Q ss_pred CCCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 165 SATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 165 ~~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
.+..+|+..+.......+++++|||+|.+|+|+|..|.+.+.+|++++|.+
T Consensus 130 ----~~~~~~~~~~~~~~~~~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~ 180 (315)
T 3r9u_A 130 ----FGKGVSTCATCDGFFYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRD 180 (315)
T ss_dssp ----BTTTEESCHHHHGGGGTTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSS
T ss_pred ----CCCeEEeeecccccccCcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCC
Confidence 666677766555455678999999999999999999999999999999998
No 21
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.90 E-value=1.7e-23 Score=179.57 Aligned_cols=171 Identities=15% Similarity=0.167 Sum_probs=134.1
Q ss_pred CcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHHH
Q 022090 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEHL 87 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 87 (303)
+||+|||||++|+++|..|++.|++|+|+|+++..+..+... ..+ +. ....+..++..++
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~----------------~~~--~~--~~~~~~~~~~~~~ 62 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHS----------------HGF--LG--QDGKAPGEIIAEA 62 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCC----------------CSS--TT--CTTCCHHHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhh----------------cCC--cC--CCCCCHHHHHHHH
Confidence 699999999999999999999999999999986544322110 000 10 1245678899999
Q ss_pred HHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCCccccccCCC
Q 022090 88 DHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSSAT 167 (303)
Q Consensus 88 ~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~~~~~~~ 167 (303)
.+.+++++... .++.+|++++.++ +.|.|.+.++ .+ +.||+||+||| +.|..|.+||.+.+
T Consensus 63 ~~~~~~~~~v~--~~~~~v~~i~~~~--~~~~v~~~~g-------~~-~~~d~vviAtG--~~~~~~~~~g~~~~----- 123 (297)
T 3fbs_A 63 RRQIERYPTIH--WVEGRVTDAKGSF--GEFIVEIDGG-------RR-ETAGRLILAMG--VTDELPEIAGLRER----- 123 (297)
T ss_dssp HHHHTTCTTEE--EEESCEEEEEEET--TEEEEEETTS-------CE-EEEEEEEECCC--CEEECCCCBTTGGG-----
T ss_pred HHHHHhcCCeE--EEEeEEEEEEEcC--CeEEEEECCC-------CE-EEcCEEEECCC--CCCCCCCCCCchhh-----
Confidence 99988773212 3456899998876 5689988764 56 89999999999 67888899998877
Q ss_pred CCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 168 GTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 168 ~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
.+..++...+.+.....+++++|||+|.+|+|+|..|.+.| +|+++++.+
T Consensus 124 -~~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~ 173 (297)
T 3fbs_A 124 -WGSAVFHCPYCHGYELDQGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGI 173 (297)
T ss_dssp -BTTTEESCHHHHTGGGTTCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTT
T ss_pred -cCCeeEEcccCcchhhcCCEEEEEecCccHHHHHHHhhhcC-cEEEEECCC
Confidence 66666666555555567899999999999999999999998 999999987
No 22
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.90 E-value=7.8e-24 Score=185.32 Aligned_cols=174 Identities=19% Similarity=0.281 Sum_probs=133.2
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
.+||+|||||++|+++|..|++.|++|++||+. ..||.|..... ...++. ++......++.++
T Consensus 14 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~----------~~~~~~------~~~~~~~~~~~~~ 76 (335)
T 2a87_A 14 VRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGALMTTTD----------VENYPG------FRNGITGPELMDE 76 (335)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGGGSCSC----------BCCSTT------CTTCBCHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCceeccch----------hhhcCC------CCCCCCHHHHHHH
Confidence 479999999999999999999999999999976 57777653210 001111 1122456789999
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEE-EEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCCccccccC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNV-KASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSS 165 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v-~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~~~~~ 165 (303)
+.+.+++++++. ++++ |++++. . +.|.| .+.++ .+ +.||+||+||| +.|..|++||.+.+
T Consensus 77 l~~~~~~~~v~~--~~~~-v~~i~~-~--~~~~v~~~~~g-------~~-~~~d~lviAtG--~~~~~~~i~g~~~~--- 137 (335)
T 2a87_A 77 MREQALRFGADL--RMED-VESVSL-H--GPLKSVVTADG-------QT-HRARAVILAMG--AAARYLQVPGEQEL--- 137 (335)
T ss_dssp HHHHHHHTTCEE--ECCC-EEEEEC-S--SSSEEEEETTS-------CE-EEEEEEEECCC--EEECCCCCTHHHHT---
T ss_pred HHHHHHHcCCEE--EEee-EEEEEe-C--CcEEEEEeCCC-------CE-EEeCEEEECCC--CCccCCCCCchHhc---
Confidence 999998888665 7776 888876 2 55777 66543 46 89999999999 67788889987766
Q ss_pred CCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 166 ATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 166 ~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
.+..+|+..........+++++|||+|.+|+|+|..|++.+.+||+++|++
T Consensus 138 ---~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~ 188 (335)
T 2a87_A 138 ---LGRGVSSCATCDGFFFRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRD 188 (335)
T ss_dssp ---BTTTEESCHHHHGGGGTTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred ---cCCceEEeeccchhhcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCC
Confidence 555566543333333568999999999999999999999999999999998
No 23
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.90 E-value=1.1e-23 Score=182.33 Aligned_cols=176 Identities=19% Similarity=0.258 Sum_probs=135.2
Q ss_pred CcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHHH
Q 022090 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEHL 87 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 87 (303)
+||+|||||++|+++|..|++.|++|+|+|+ ..||.|.... . ++.++ ...+.+..++.+++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~--~~gG~~~~~~--~-----------~~~~~----~~~~~~~~~~~~~~ 62 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGIRTGLMGE--RFGGQILDTV--D-----------IENYI----SVPKTEGQKLAGAL 62 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECS--STTGGGGGCC--E-----------ECCBT----TBSSEEHHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeC--CCCceecccc--c-----------ccccc----CcCCCCHHHHHHHH
Confidence 6999999999999999999999999999986 4688876421 0 00000 01234567889999
Q ss_pred HHHHHHcCCCceeEeCeEEEEEEEeCC-CCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCCccccccCC
Q 022090 88 DHYVSHFNIGPSIRYQRSVESASYDEA-TNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSSA 166 (303)
Q Consensus 88 ~~~~~~~~l~~~i~~~~~V~~i~~~~~-~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~~~~~~ 166 (303)
.+++++++++. +++++|+.++.+.. .+.|.|.+.++ .+ +.||+||+||| +.|..|++||.+.+
T Consensus 63 ~~~~~~~~v~~--~~~~~v~~i~~~~~~~~~~~v~~~~g-------~~-~~~~~lv~AtG--~~~~~~~~~g~~~~---- 126 (310)
T 1fl2_A 63 KVHVDEYDVDV--IDSQSASKLIPAAVEGGLHQIETASG-------AV-LKARSIIVATG--AKWRNMNVPGEDQY---- 126 (310)
T ss_dssp HHHHHTSCEEE--ECSCCEEEEECCSSTTCCEEEEETTS-------CE-EEEEEEEECCC--EEECCCCCTTTTTT----
T ss_pred HHHHHHcCCeE--EccCEEEEEEecccCCceEEEEECCC-------CE-EEeCEEEECcC--CCcCCCCCCChhhc----
Confidence 99998887654 88889999976532 24688887654 46 89999999999 66777889998766
Q ss_pred CCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCe
Q 022090 167 TGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPV 220 (303)
Q Consensus 167 ~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~ 220 (303)
.+..+++..........+++++|||+|.+|+|+|..|++.+.+||+++|++.
T Consensus 127 --~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 178 (310)
T 1fl2_A 127 --RTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE 178 (310)
T ss_dssp --BTTTEESCHHHHGGGGBTCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSS
T ss_pred --ccceeEEeccCcHhhcCCCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcc
Confidence 5554554433322334679999999999999999999999999999999983
No 24
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.90 E-value=9.1e-24 Score=184.56 Aligned_cols=175 Identities=15% Similarity=0.218 Sum_probs=132.7
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEec----CCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILER----ENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQ 82 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~----~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (303)
.+||+|||||++|+++|..|++.|++|+|+|+ ....||.|..... ...++. ++......+
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~----------~~~~~~------~~~~~~~~~ 71 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTD----------VENFPG------FPEGILGVE 71 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSE----------ECCSTT------CTTCEEHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeeccc----------cccCCC------CccCCCHHH
Confidence 47999999999999999999999999999999 5566776643210 011111 122245678
Q ss_pred HHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCCccc-
Q 022090 83 FIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCS- 161 (303)
Q Consensus 83 l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~- 161 (303)
+.+++.+.+++.+++. ++++ |++++... +.|+|.+ ++ .+ +.||+||+||| +.|..|++||.+.
T Consensus 72 ~~~~l~~~~~~~gv~~--~~~~-v~~i~~~~--~~~~v~~-~~-------~~-~~~~~vv~A~G--~~~~~~~~~g~~~~ 135 (333)
T 1vdc_A 72 LTDKFRKQSERFGTTI--FTET-VTKVDFSS--KPFKLFT-DS-------KA-ILADAVILAIG--AVAKRLSFVGSGEV 135 (333)
T ss_dssp HHHHHHHHHHHTTCEE--ECCC-CCEEECSS--SSEEEEC-SS-------EE-EEEEEEEECCC--EEECCCCCBTCSSS
T ss_pred HHHHHHHHHHHCCCEE--EEeE-EEEEEEcC--CEEEEEE-CC-------cE-EEcCEEEECCC--CCcCCCCCCCcccc
Confidence 9999999998888665 7776 88887654 5688877 32 57 89999999999 6677888888765
Q ss_pred ---cccCCCCCccEEecccCCCCCC--CCCCeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 162 ---FCSSATGTGEVIHSTQYKNGKP--YGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 162 ---~~~~~~~~g~~~~~~~~~~~~~--~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
| .+..+|+........ ..+++++|||+|.+|+|+|..|.+.+.+|++++|++
T Consensus 136 ~~~~------~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~ 192 (333)
T 1vdc_A 136 LGGF------WNRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRD 192 (333)
T ss_dssp SSCC------BTTTEESCHHHHTTSGGGTTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred cccc------ccCcEEEeccCccchhhcCCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCC
Confidence 4 444455443333222 568999999999999999999999999999999998
No 25
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.90 E-value=3.5e-23 Score=178.77 Aligned_cols=177 Identities=12% Similarity=0.210 Sum_probs=126.3
Q ss_pred CCCCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHH
Q 022090 4 QAAGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQF 83 (303)
Q Consensus 4 ~~~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 83 (303)
.+++|||+||||||+|++||..|+++|.+|+|||++.. ||.+..+ |+ .++. ....+..++
T Consensus 3 ~M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~-gg~~~~~-~~--------------~~~~----~~~~~~~~~ 62 (304)
T 4fk1_A 3 AMKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTN-RNRVTQN-SH--------------GFIT----RDGIKPEEF 62 (304)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCC-GGGGSSC-BC--------------CSTT----CTTBCHHHH
T ss_pred CCCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC-CCeeeee-cC--------------CccC----CCCCCHHHH
Confidence 45679999999999999999999999999999999764 4433221 11 1110 112345677
Q ss_pred HHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCCccccc
Q 022090 84 IEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFC 163 (303)
Q Consensus 84 ~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~~~ 163 (303)
.+...+.+.+++... +++..+..+...+ .+.+++.+.++ .+ +.||+||+||| +.|+.|++||.+.+
T Consensus 63 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~v~~~~g-------~~-~~a~~liiATG--s~p~~p~i~G~~~~- 128 (304)
T 4fk1_A 63 KEIGLNEVMKYPSVH--YYEKTVVMITKQS-TGLFEIVTKDH-------TK-YLAERVLLATG--MQEEFPSIPNVREY- 128 (304)
T ss_dssp HHHHHHHHTTSTTEE--EEECCEEEEEECT-TSCEEEEETTC-------CE-EEEEEEEECCC--CEEECCSCTTHHHH-
T ss_pred HHHHHHHHHhcCCEE--EEeeEEEEeeecC-CCcEEEEECCC-------CE-EEeCEEEEccC--CccccccccCcccc-
Confidence 777666666665433 4555566665544 35688887764 57 89999999999 78999999998876
Q ss_pred cCCCCCccEEecccCCCCCCCCCCeEEEECCCcc-HHHHHHHHhhccCceEEEeecC
Q 022090 164 SSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNS-GMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 164 ~~~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~-g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
.+..++..........++++++|||+|.. ++|+|..+.+.+.+|+++.+.+
T Consensus 129 -----~~~~v~~~~~~~~~~~~~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~ 180 (304)
T 4fk1_A 129 -----YGKSLFSCPYCDGWELKDQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGN 180 (304)
T ss_dssp -----BTTTEESCHHHHSGGGTTSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSC
T ss_pred -----ccceeeeccccchhHhcCCceeeecCCCchhhhHHHHHHhCCceEEEEeccc
Confidence 66545555444445566788899998864 6788988888899999988876
No 26
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.89 E-value=1.6e-23 Score=181.87 Aligned_cols=174 Identities=18% Similarity=0.303 Sum_probs=132.2
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
.+||+|||||++|+++|..|++.|++|+++|+. ..||.|..... ...++. ++......++.++
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~----------~~~~~~------~~~~~~~~~~~~~ 67 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQPVLITGM-EKGGQLTTTTE----------VENWPG------DPNDLTGPLLMER 67 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS-STTGGGGGCSB----------CCCSTT------CCSSCBHHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC-CCCceEecchh----------hhhCCC------CCCCCCHHHHHHH
Confidence 479999999999999999999999999999975 57776643210 001111 1223456788999
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCCccccccCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSSA 166 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~~~~~~ 166 (303)
+.+.+++++++. ++++ ++.++... +.|.+ ..++ .+ +.||+||+||| +.|..|++||.+.+
T Consensus 68 ~~~~~~~~~~~~--~~~~-v~~i~~~~--~~~~v-~~~~-------~~-~~~~~lv~AtG--~~~~~~~~~g~~~~---- 127 (320)
T 1trb_A 68 MHEHATKFETEI--IFDH-INKVDLQN--RPFRL-NGDN-------GE-YTCDALIIATG--ASARYLGLPSEEAF---- 127 (320)
T ss_dssp HHHHHHHTTCEE--ECCC-EEEEECSS--SSEEE-EESS-------CE-EEEEEEEECCC--EEECCCCCHHHHHT----
T ss_pred HHHHHHHCCCEE--EEee-eeEEEecC--CEEEE-EeCC-------CE-EEcCEEEECCC--CCcCCCCCCChHHh----
Confidence 999998888764 6665 88887654 56877 4443 46 89999999999 66778888887665
Q ss_pred CCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 167 TGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 167 ~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
.+..+|.....+.....+++++|||+|.+|+|+|..|.+.|.+||+++|++
T Consensus 128 --~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 178 (320)
T 1trb_A 128 --KGRGVSACATSDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRD 178 (320)
T ss_dssp --BTTTEESCHHHHGGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred --CCceeEecccCCccccCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCC
Confidence 444455443333333567999999999999999999999999999999998
No 27
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.89 E-value=4.4e-23 Score=179.21 Aligned_cols=173 Identities=16% Similarity=0.332 Sum_probs=130.7
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
.+||+|||||++|+++|..|++.|++|+|+|+. ..||.|..... ...++. + ......++.++
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~----------~~~~~~------~-~~~~~~~~~~~ 77 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGFSVAILDKA-VAGGLTAEAPL----------VENYLG------F-KSIVGSELAKL 77 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTGGGGGCSC----------BCCBTT------B-SSBCHHHHHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCC-CCCccccccch----------hhhcCC------C-cccCHHHHHHH
Confidence 479999999999999999999999999999994 57777653210 000111 0 13456788889
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCCccccccCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSSA 166 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~~~~~~ 166 (303)
+.+.++++++.. ++ .+|++++... +.|.|.+.+ .+ +.||+||+||| +.|..|.+||.+.+
T Consensus 78 ~~~~~~~~~v~~--~~-~~v~~i~~~~--~~~~v~~~~--------~~-~~~~~li~AtG--~~~~~~~i~g~~~~---- 137 (319)
T 3cty_A 78 FADHAANYAKIR--EG-VEVRSIKKTQ--GGFDIETND--------DT-YHAKYVIITTG--TTHKHLGVKGESEY---- 137 (319)
T ss_dssp HHHHHHTTSEEE--ET-CCEEEEEEET--TEEEEEESS--------SE-EEEEEEEECCC--EEECCCCCBTTTTT----
T ss_pred HHHHHHHcCCEE--EE-eeEEEEEEeC--CEEEEEECC--------CE-EEeCEEEECCC--CCcccCCCCChHHh----
Confidence 998888887653 55 6888988765 567776632 46 89999999999 66788888887665
Q ss_pred CCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 167 TGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 167 ~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
.+..++.....+.....+++++|||+|.+|+|+|..|++.+.+||+++|.+
T Consensus 138 --~~~~~~~~~~~~~~~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~ 188 (319)
T 3cty_A 138 --FGKGTSYCSTCDGYLFKGKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMP 188 (319)
T ss_dssp --BTTTEESCHHHHGGGGBTSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSS
T ss_pred --CCceEEEEEecchhhcCCCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCC
Confidence 444444433322233457999999999999999999999999999999988
No 28
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.89 E-value=1.3e-24 Score=193.48 Aligned_cols=181 Identities=17% Similarity=0.190 Sum_probs=127.0
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHH
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 85 (303)
.+.+|+|||||+||+++|..|...+.+|+|||+++..+ |....+ +..+ ....+.+++..
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~-------y~~~~l--~~~l------------~g~~~~~~l~~ 66 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLP-------YYRPRL--NEII------------AKNKSIDDILI 66 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCC-------BCGGGH--HHHH------------HSCCCGGGTBS
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCC-------cccChh--hHHH------------cCCCCHHHccC
Confidence 45799999999999999999977899999999998754 211100 0000 00111122333
Q ss_pred HHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCCccccccC
Q 022090 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSS 165 (303)
Q Consensus 86 ~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~~~~~ 165 (303)
+..++.++++++. +++++|++++.+. .+|++.++ .+ +.||+||+||| +.|+.|++||.+.
T Consensus 67 ~~~~~~~~~~i~~--~~~~~V~~id~~~----~~v~~~~g-------~~-~~yd~lvlAtG--~~p~~p~i~G~~~---- 126 (385)
T 3klj_A 67 KKNDWYEKNNIKV--ITSEFATSIDPNN----KLVTLKSG-------EK-IKYEKLIIASG--SIANKIKVPHADE---- 126 (385)
T ss_dssp SCHHHHHHTTCEE--ECSCCEEEEETTT----TEEEETTS-------CE-EECSEEEECCC--EEECCCCCTTCSC----
T ss_pred CCHHHHHHCCCEE--EeCCEEEEEECCC----CEEEECCC-------CE-EECCEEEEecC--CCcCCCCCCCCCC----
Confidence 3344555667665 8899999998765 46777664 57 89999999999 7888899988652
Q ss_pred CCCCccEEecccCCCCCCC-----CCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeeeh-hhHHHHHHH
Q 022090 166 ATGTGEVIHSTQYKNGKPY-----GGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSR-EMVYLGVVL 234 (303)
Q Consensus 166 ~~~~g~~~~~~~~~~~~~~-----~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp~-~~~~~~~~~ 234 (303)
+++.....+.... .+++++|||+|.+|+|+|..|++.|.+||+++|.+ +++|+ .+..++..+
T Consensus 127 ------v~~~~~~~d~~~l~~~l~~~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~-~~l~~~~~~~~~~~~ 194 (385)
T 3klj_A 127 ------IFSLYSYDDALKIKDECKNKGKAFIIGGGILGIELAQAIIDSGTPASIGIILE-YPLERQLDRDGGLFL 194 (385)
T ss_dssp ------EECCSSHHHHHHHHHHHHHHSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSS-SSCTTTSCHHHHHHH
T ss_pred ------eEEeCCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCC-ccchhhcCHHHHHHH
Confidence 2333322221111 26899999999999999999999999999999999 77776 344444433
No 29
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.89 E-value=1.8e-22 Score=186.65 Aligned_cols=177 Identities=19% Similarity=0.257 Sum_probs=138.7
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHH
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 85 (303)
..+||+|||||++|+++|..|++.|++|+++|+ ..||.|..... ...+.. ..+....++.+
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG~~~~~~~----------~~~~~~-------~~~~~~~~l~~ 271 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGGQVLDTVD----------IENYIS-------VPKTEGQKLAG 271 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTGGGTTCSC----------BCCBTT-------BSSBCHHHHHH
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCCccccccc----------ccccCC-------CCCCCHHHHHH
Confidence 467999999999999999999999999999986 47888764210 000111 01245778999
Q ss_pred HHHHHHHHcCCCceeEeCeEEEEEEEeCC-CCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCCcccccc
Q 022090 86 HLDHYVSHFNIGPSIRYQRSVESASYDEA-TNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCS 164 (303)
Q Consensus 86 ~l~~~~~~~~l~~~i~~~~~V~~i~~~~~-~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~~~~ 164 (303)
++.+.+++++++. +++++|++++.+.. .+.|.|.+.++ .+ +.||+||+||| +.|+.|++||.+.|
T Consensus 272 ~l~~~~~~~gv~v--~~~~~v~~i~~~~~~~~~~~V~~~~g-------~~-~~~d~vVlAtG--~~~~~~~ipG~~~~-- 337 (521)
T 1hyu_A 272 ALKAHVSDYDVDV--IDSQSASKLVPAATEGGLHQIETASG-------AV-LKARSIIIATG--AKWRNMNVPGEDQY-- 337 (521)
T ss_dssp HHHHHHHTSCEEE--ECSCCEEEEECCSSTTSCEEEEETTS-------CE-EEEEEEEECCC--EEECCCCCTTTTTT--
T ss_pred HHHHHHHHcCCEE--EcCCEEEEEEeccCCCceEEEEECCC-------CE-EEcCEEEECCC--CCcCCCCCCChhhh--
Confidence 9999998888655 88889999986432 34688888654 46 89999999999 66778889998777
Q ss_pred CCCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 165 SATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 165 ~~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
.+..++...........+++|+|||+|++|+|+|..|++.+.+||+++|.+
T Consensus 338 ----~~~~v~~~~~~~~~~~~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~ 388 (521)
T 1hyu_A 338 ----RTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAP 388 (521)
T ss_dssp ----TTTTEECCTTCCGGGGBTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSS
T ss_pred ----cCceEEEeecCchhhcCCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCc
Confidence 665556555544444568999999999999999999999999999999998
No 30
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.87 E-value=2.8e-22 Score=183.08 Aligned_cols=198 Identities=14% Similarity=0.110 Sum_probs=129.5
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcC-CCCceEEecCc----ccccCCCCCCCCCCCCCCCHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLAK----QFCQLPHLPFPSSYPMFVSRA 81 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 81 (303)
.+||+|||||++|+++|..|++.|.+|+|||+.+.+||.|.+. +.++..+.... .+..++. .....+..
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~------~~~~~~~~ 77 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIAN------VKIPLDFS 77 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHC------SCCCCCHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhccc------CCCCcCHH
Confidence 4899999999999999999999999999999999999988642 11111000000 0000000 11122333
Q ss_pred HHHHHHHH------------HHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCC
Q 022090 82 QFIEHLDH------------YVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETT 149 (303)
Q Consensus 82 ~l~~~l~~------------~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~ 149 (303)
.+..+... ..+..+++. + ..++..++. ..+.|...++ +..+ +.||+||+||| +
T Consensus 78 ~~~~~~~~~~~l~~~~~~~~~~~~~~v~~--~-~g~v~~id~----~~~~V~~~~g-----~~~~-~~~d~lviAtG--~ 142 (466)
T 3l8k_A 78 TVQDRKDYVQELRFKQHKRNMSQYETLTF--Y-KGYVKIKDP----THVIVKTDEG-----KEIE-AETRYMIIASG--A 142 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCTTEEE--E-SEEEEEEET----TEEEEEETTS-----CEEE-EEEEEEEECCC--E
T ss_pred HHHHHHHhheeccccchHHHHHHhCCCEE--E-EeEEEEecC----CeEEEEcCCC-----cEEE-EecCEEEECCC--C
Confidence 33333322 222223322 3 335666542 4577776543 2345 78999999999 7
Q ss_pred CCCCCCCCCccccccCCCCCccEEecccCC---CCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeeehh
Q 022090 150 NPFTPDIRGLCSFCSSATGTGEVIHSTQYK---NGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSRE 226 (303)
Q Consensus 150 ~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp~~ 226 (303)
.|..|++||.+.+ +++.++. ......+++++|||+|.+|+|+|..|++.|.+||+++|.+ .++|..
T Consensus 143 ~p~~p~i~G~~~~----------~t~~~~~~~~~~l~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~ 211 (466)
T 3l8k_A 143 ETAKLRLPGVEYC----------LTSDDIFGYKTSFRKLPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLD-RALITL 211 (466)
T ss_dssp EECCCCCTTGGGS----------BCHHHHHSTTCSCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSCTTS
T ss_pred CccCCCCCCccce----------EeHHHHHHHHHHHhhCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCC-cCCCCC
Confidence 8889999997643 3333222 1233457999999999999999999999999999999998 778776
Q ss_pred -hHHHHHHHHh
Q 022090 227 -MVYLGVVLFK 236 (303)
Q Consensus 227 -~~~~~~~~~~ 236 (303)
+.++...+.+
T Consensus 212 ~d~~~~~~l~~ 222 (466)
T 3l8k_A 212 EDQDIVNTLLS 222 (466)
T ss_dssp CCHHHHHHHHH
T ss_pred CCHHHHHHHHh
Confidence 5555554443
No 31
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=99.87 E-value=1.5e-21 Score=177.57 Aligned_cols=184 Identities=15% Similarity=0.185 Sum_probs=123.6
Q ss_pred CcEEEECCcHHHHHHHHHHhhC--CCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHH
Q 022090 8 VEVIMVGAGTSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~--g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 85 (303)
+||+|||||++|+++|..|++. |.+|+|||+++..|..... +...... .+.+..++..
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~-----~~~~~~~---------------~~~~~~~~~~ 62 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGG-----LSAYFNH---------------TINELHEARY 62 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC------------------------------------CC
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCcc-----chhhhcC---------------CCCCHHHhhc
Confidence 5999999999999999999998 8999999999876621100 0000000 0000111111
Q ss_pred HHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCCccccccC
Q 022090 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSS 165 (303)
Q Consensus 86 ~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~~~~~ 165 (303)
+..+.+++++++. +++++|++++... ..+.+.... ...+ +.||+||+||| +.|..|++||.+.
T Consensus 63 ~~~~~~~~~gi~~--~~~~~V~~id~~~--~~v~v~~~~------~~~~-~~~d~lviAtG--~~p~~p~i~g~~~---- 125 (452)
T 3oc4_A 63 ITEEELRRQKIQL--LLNREVVAMDVEN--QLIAWTRKE------EQQW-YSYDKLILATG--ASQFSTQIRGSQT---- 125 (452)
T ss_dssp CCHHHHHHTTEEE--ECSCEEEEEETTT--TEEEEEETT------EEEE-EECSEEEECCC--CCBCCCCCBTTTC----
T ss_pred CCHHHHHHCCCEE--EECCEEEEEECCC--CEEEEEecC------ceEE-EEcCEEEECCC--cccCCCCCCCCCC----
Confidence 1233345566554 7899999998765 556665221 1257 89999999999 7888999998763
Q ss_pred CCCCccEEecccCCCCCC-----CCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeeeh-hhHHHHHH
Q 022090 166 ATGTGEVIHSTQYKNGKP-----YGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSR-EMVYLGVV 233 (303)
Q Consensus 166 ~~~~g~~~~~~~~~~~~~-----~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp~-~~~~~~~~ 233 (303)
..++++..+..... ..+++++|||+|.+|+|+|..+++.|.+||+++|.+ .++|+ .+.++...
T Consensus 126 ----~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~d~~~~~~ 194 (452)
T 3oc4_A 126 ----EKLLKYKFLSGALAAVPLLENSQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLE-NLLPKYFDKEMVAE 194 (452)
T ss_dssp ----TTEEEGGGCC----CCHHHHTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSSTTTCCHHHHHH
T ss_pred ----CCEEEeCCHHHHHHHHHHHhcCCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccC-ccccccCCHHHHHH
Confidence 23455544433221 357999999999999999999999999999999998 67765 34444433
No 32
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.86 E-value=2.3e-23 Score=184.42 Aligned_cols=174 Identities=21% Similarity=0.269 Sum_probs=118.2
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
..||+|||||++|+++|..|++.| +|+|+|+++..+ |... .+ +..+ . ...+.+++..+
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~--~~~~---~l----~~~~---~---------g~~~~~~~~~~ 65 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPY--YSKP---ML----SHYI---A---------GFIPRNRLFPY 65 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCC--CCST---TH----HHHH---T---------TSSCGGGGCSS
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCc--cccc---hh----HHHH---h---------CCCCHHHhccC
Confidence 469999999999999999999999 999999987542 1100 00 0000 0 00111122222
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCCccccccCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSSA 166 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~~~~~~ 166 (303)
..+++++.+++. +++++|+.++... +.|. .++ .+ +.||+||+||| +.|..|++||.+.
T Consensus 66 ~~~~~~~~~v~~--~~g~~v~~id~~~----~~V~-~~g-------~~-~~~d~lViATG--s~p~~p~i~G~~~----- 123 (367)
T 1xhc_A 66 SLDWYRKRGIEI--RLAEEAKLIDRGR----KVVI-TEK-------GE-VPYDTLVLATG--ARAREPQIKGKEY----- 123 (367)
T ss_dssp CHHHHHHHTEEE--ECSCCEEEEETTT----TEEE-ESS-------CE-EECSEEEECCC--EEECCCCSBTGGG-----
T ss_pred CHHHHHhCCcEE--EECCEEEEEECCC----CEEE-ECC-------cE-EECCEEEECCC--CCCCCCCCCCcCC-----
Confidence 334445567654 7888898887654 5666 443 56 89999999999 7888888988332
Q ss_pred CCCccEEecccCCCCCCC-----CCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeeehhhHHHH
Q 022090 167 TGTGEVIHSTQYKNGKPY-----GGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREMVYLG 231 (303)
Q Consensus 167 ~~~g~~~~~~~~~~~~~~-----~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp~~~~~~~ 231 (303)
+++.....+...+ .+++++|||+|.+|+|+|..|++.|.+||+++|.+ +++| .+.++.
T Consensus 124 -----v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~-~~~~~~ 186 (367)
T 1xhc_A 124 -----LLTLRTIFDADRIKESIENSGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGA-MFLG-LDEELS 186 (367)
T ss_dssp -----EECCCSHHHHHHHHHHHHHHSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSS-CCTT-CCHHHH
T ss_pred -----EEEEcCHHHHHHHHHHhhcCCcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCC-eecc-CCHHHH
Confidence 2443322221111 35899999999999999999999999999999998 6776 443443
No 33
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.86 E-value=1.4e-22 Score=187.41 Aligned_cols=203 Identities=17% Similarity=0.150 Sum_probs=128.9
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC--------CCCCccCc-CCCCceEEecCcc----cccCCCCCCCC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN--------CYASIWKK-YSYDRLRLHLAKQ----FCQLPHLPFPS 72 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~--------~~gg~w~~-~~~~~~~~~~~~~----~~~~~~~~~~~ 72 (303)
..+||+|||||++|+++|..|++.|.+|+|||+++ .+||+|.+ .+.|...+..... ...+..+.++.
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~~ 110 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKV 110 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCccc
Confidence 35799999999999999999999999999999964 68887653 2222211110000 00011111111
Q ss_pred CCCCCCCHHHHHHHHHHHHH-----------HcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEE
Q 022090 73 SYPMFVSRAQFIEHLDHYVS-----------HFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFL 141 (303)
Q Consensus 73 ~~~~~~~~~~l~~~l~~~~~-----------~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~v 141 (303)
......+...+.++.+.+.+ ..+++ .+...+..++. ..+.|...++ +..+ +.||+|
T Consensus 111 ~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~---~i~g~a~~~d~----~~v~v~~~~g-----~~~~-i~~d~l 177 (519)
T 3qfa_A 111 EETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVV---YENAYGQFIGP----HRIKATNNKG-----KEKI-YSAERF 177 (519)
T ss_dssp CSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE---EECSEEEEEET----TEEEEECTTC-----CCCE-EEEEEE
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE---EEEEEEEEeeC----CEEEEEcCCC-----CEEE-EECCEE
Confidence 11223455666666554333 23433 23333444422 2345544332 2247 899999
Q ss_pred EEccCCCCCCCCCCCCCccccccCCCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCee
Q 022090 142 VVASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVH 221 (303)
Q Consensus 142 IlAtG~~~~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~ 221 (303)
|+||| +.|..|++||.+.+ ++++.++.. ....+++++|||+|.+|+|+|..|++.|.+||+++|+ .
T Consensus 178 ViATG--s~p~~p~i~G~~~~---------~~t~~~~~~-l~~~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~--~ 243 (519)
T 3qfa_A 178 LIATG--ERPRYLGIPGDKEY---------CISSDDLFS-LPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRS--I 243 (519)
T ss_dssp EECCC--EEECCCCCTTHHHH---------CBCHHHHTT-CSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS--C
T ss_pred EEECC--CCcCCCCCCCccCc---------eEcHHHHhh-hhhcCCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc--c
Confidence 99999 88899999996543 234444433 3345788999999999999999999999999999984 5
Q ss_pred eeehhhHHHHHHHH
Q 022090 222 VLSREMVYLGVVLF 235 (303)
Q Consensus 222 ~lp~~~~~~~~~~~ 235 (303)
++|..+.++...+.
T Consensus 244 ~l~~~d~~~~~~~~ 257 (519)
T 3qfa_A 244 LLRGFDQDMANKIG 257 (519)
T ss_dssp SSTTSCHHHHHHHH
T ss_pred ccccCCHHHHHHHH
Confidence 77776655554443
No 34
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.86 E-value=2.7e-22 Score=184.36 Aligned_cols=203 Identities=17% Similarity=0.171 Sum_probs=124.9
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCc-CCCCceEEecCcccc-----cCCCCCCCCCCCCCCCH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHLAKQFC-----QLPHLPFPSSYPMFVSR 80 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~-~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 80 (303)
.+||+|||||++|+++|..|++.|++|+|||+++.+||+|.+ .+++...+....... .+..+.++.. ....+.
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~-~~~~~~ 103 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVA-NPKLNL 103 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECC-CCEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccC-CCccCH
Confidence 489999999999999999999999999999999999998754 222221111000000 0111111100 011123
Q ss_pred HHHHHHH-----------HHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCC
Q 022090 81 AQFIEHL-----------DHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETT 149 (303)
Q Consensus 81 ~~l~~~l-----------~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~ 149 (303)
..+..+. ....+..+++. ..+. ...+ +...+.|...++ +..+ +.||+||+||| +
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~g~-~~~~----~~~~~~v~~~~g-----~~~~-~~~d~lViATG--s 168 (491)
T 3urh_A 104 QKMMAHKDATVKSNVDGVSFLFKKNKIDG--FQGT-GKVL----GQGKVSVTNEKG-----EEQV-LEAKNVVIATG--S 168 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEE--EESE-EEEC----SSSEEEEECTTS-----CEEE-EECSEEEECCC--E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEEE-EEEe----cCCEEEEEeCCC-----ceEE-EEeCEEEEccC--C
Confidence 3333332 22333445442 3332 2221 124455654332 2257 89999999999 5
Q ss_pred CCCCCCCCCccc-cccCCCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeeehhhH
Q 022090 150 NPFTPDIRGLCS-FCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREMV 228 (303)
Q Consensus 150 ~p~~p~~~g~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp~~~~ 228 (303)
.| |.+||.+. + .+..+++..........+++++|||+|.+|+|+|..|++.|.+||++++.+ .++|..+.
T Consensus 169 ~p--~~ipg~~~~~------~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~ 239 (491)
T 3urh_A 169 DV--AGIPGVEVAF------DEKTIVSSTGALALEKVPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLD-TILGGMDG 239 (491)
T ss_dssp EC--CCBTTBCCCC------CSSSEECHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS-SSSSSSCH
T ss_pred CC--CCCCCccccc------CCeeEEehhHhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccc-cccccCCH
Confidence 44 45677653 3 343344443333345568999999999999999999999999999999998 77776655
Q ss_pred HHHHHH
Q 022090 229 YLGVVL 234 (303)
Q Consensus 229 ~~~~~~ 234 (303)
++...+
T Consensus 240 ~~~~~l 245 (491)
T 3urh_A 240 EVAKQL 245 (491)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 554443
No 35
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.86 E-value=3.9e-22 Score=182.25 Aligned_cols=200 Identities=18% Similarity=0.161 Sum_probs=124.1
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcC-CCCceEEecCcc----cccCCCC-CCCCCCCCCCCH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLAKQ----FCQLPHL-PFPSSYPMFVSR 80 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~-~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~ 80 (303)
++||+|||||++|+++|..|++.|.+|+|||++ .+||.|.+. +.+...+..... ....+.. ..+.. ....+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~-~~~~~~ 81 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAAT-VPTIDR 81 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCC-CCCCCH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCC-CCccCH
Confidence 589999999999999999999999999999998 688887532 111110000000 0011111 01100 111223
Q ss_pred HHHHH-------HHH-----HHHHHc-CCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCC
Q 022090 81 AQFIE-------HLD-----HYVSHF-NIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (303)
Q Consensus 81 ~~l~~-------~l~-----~~~~~~-~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~ 147 (303)
..+.. ++. ...+.. +++. +.+ ++..++ . ..+.|...++ +..+ +.||+||+|||
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~--~~g-~~~~~~--~--~~~~v~~~~g-----~~~~-~~~d~lviAtG- 147 (467)
T 1zk7_A 82 SKLLAQQQARVDELRHAKYEGILGGNPAITV--VHG-EARFKD--D--QSLTVRLNEG-----GERV-VMFDRCLVATG- 147 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHTTCTTEEE--EEE-EEEEEE--T--TEEEEEETTS-----SEEE-EECSEEEECCC-
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHhccCCeEE--EEE-EEEEcc--C--CEEEEEeCCC-----ceEE-EEeCEEEEeCC-
Confidence 33332 222 112222 3322 333 344443 2 4566666443 2256 89999999999
Q ss_pred CCCCCCCCCCCccccccCCCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeeehhh
Q 022090 148 TTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREM 227 (303)
Q Consensus 148 ~~~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp~~~ 227 (303)
+.|..|++||.+.. .++++.+... ....+++++|||+|.+|+|+|..+.+.|.+||+++|.+ +++| .+
T Consensus 148 -s~p~~p~i~G~~~~--------~~~~~~~~~~-~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~-~~ 215 (467)
T 1zk7_A 148 -ASPAVPPIPGLKES--------PYWTSTEALA-SDTIPERLAVIGSSVVALELAQAFARLGSKVTVLARNT-LFFR-ED 215 (467)
T ss_dssp -EEECCCCCTTTTTS--------CCBCHHHHHH-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC-TTTT-SC
T ss_pred -CCCCCCCCCCCCcC--------ceecHHHHhc-ccccCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECC-ccCC-CC
Confidence 78889999987642 1234433332 22347999999999999999999999999999999998 6776 44
Q ss_pred HHHHHHH
Q 022090 228 VYLGVVL 234 (303)
Q Consensus 228 ~~~~~~~ 234 (303)
..+...+
T Consensus 216 ~~~~~~l 222 (467)
T 1zk7_A 216 PAIGEAV 222 (467)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444333
No 36
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.86 E-value=6.1e-23 Score=188.05 Aligned_cols=208 Identities=17% Similarity=0.228 Sum_probs=126.7
Q ss_pred CCCCCCCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcC-CCCceEEecCc----ccccCCCCCCCCC--
Q 022090 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLAK----QFCQLPHLPFPSS-- 73 (303)
Q Consensus 1 M~~~~~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~-~~~~~~~~~~~----~~~~~~~~~~~~~-- 73 (303)
|+.++..+||+|||||++|+++|..|++.|.+|+|||++ .+||.|.+. +.+...+.... .......+.+...
T Consensus 5 m~~~~~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~ 83 (479)
T 2hqm_A 5 MSTNTKHYDYLVIGGGSGGVASARRAASYGAKTLLVEAK-ALGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLP 83 (479)
T ss_dssp -----CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSC
T ss_pred ccCccccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC-CcCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCcccccc
Confidence 444445689999999999999999999999999999998 578887531 11111000000 0000111111100
Q ss_pred --C-CCCCCHHHHHHHHH-----------HHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeC
Q 022090 74 --Y-PMFVSRAQFIEHLD-----------HYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGR 139 (303)
Q Consensus 74 --~-~~~~~~~~l~~~l~-----------~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad 139 (303)
. ....+...+.++.. ...+..+++. +.+ .++.+ + ...+.|...++ +..+ +.||
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~--~~g-~~~~i--~--~~~~~v~~~~g-----~~~~-~~~d 150 (479)
T 2hqm_A 84 LDKEHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDV--VFG-WARFN--K--DGNVEVQKRDN-----TTEV-YSAN 150 (479)
T ss_dssp CSGGGCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEE--EEE-EEEEC--T--TSCEEEEESSS-----CCEE-EEEE
T ss_pred cccccCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEe-EEEEe--e--CCEEEEEeCCC-----cEEE-EEeC
Confidence 0 01223344443332 2333444432 433 34433 2 23466665443 1137 8999
Q ss_pred EEEEccCCCCCCCCC-CCCCccccccCCCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeec
Q 022090 140 FLVVASGETTNPFTP-DIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRS 218 (303)
Q Consensus 140 ~vIlAtG~~~~p~~p-~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~ 218 (303)
+||+||| +.|..| ++||.+.. +++.++.. ....+++++|||+|.+|+|+|..|++.|.+||+++|.
T Consensus 151 ~lviAtG--s~p~~p~~i~g~~~~----------~~~~~~~~-l~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~ 217 (479)
T 2hqm_A 151 HILVATG--GKAIFPENIPGFELG----------TDSDGFFR-LEEQPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRG 217 (479)
T ss_dssp EEEECCC--EEECCCTTSTTGGGS----------BCHHHHHH-CSSCCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred EEEEcCC--CCCCCCCCCCCcccc----------cchHHHhc-ccccCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeC
Confidence 9999999 788888 88887432 23333222 1235789999999999999999999999999999999
Q ss_pred CeeeeehhhHHHHHHHHh
Q 022090 219 PVHVLSREMVYLGVVLFK 236 (303)
Q Consensus 219 ~~~~lp~~~~~~~~~~~~ 236 (303)
+ .++|..+.+++..+.+
T Consensus 218 ~-~~l~~~d~~~~~~l~~ 234 (479)
T 2hqm_A 218 E-TVLRKFDECIQNTITD 234 (479)
T ss_dssp S-SSCTTSCHHHHHHHHH
T ss_pred C-ccccccCHHHHHHHHH
Confidence 8 7777766555544433
No 37
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.86 E-value=1.5e-21 Score=178.61 Aligned_cols=204 Identities=11% Similarity=0.108 Sum_probs=131.2
Q ss_pred CCCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcC-CCCceEEecCc----cccc-CCCCCCCCCCCCCC
Q 022090 5 AAGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLAK----QFCQ-LPHLPFPSSYPMFV 78 (303)
Q Consensus 5 ~~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~-~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~ 78 (303)
..++||+|||||++|+++|..|++.|++|+|||+++.+||.|... +.+...+.... .+.. +..+..+.. ....
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~-~~~~ 82 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVS-NVEI 82 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEES-CEEE
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccC-CCcc
Confidence 346899999999999999999999999999999998899987532 11110000000 0000 000000000 0001
Q ss_pred CHHH-----------HHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCC
Q 022090 79 SRAQ-----------FIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (303)
Q Consensus 79 ~~~~-----------l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~ 147 (303)
+... +...+...+++.+++. ++++.+. + +. ..+.|.+.++ +..+ +.||+||+|||
T Consensus 83 ~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~--~~g~~~~-~--~~--~~~~v~~~~G-----~~~~-i~~d~lIiAtG- 148 (470)
T 1dxl_A 83 DLAAMMGQKDKAVSNLTRGIEGLFKKNKVTY--VKGYGKF-V--SP--SEISVDTIEG-----ENTV-VKGKHIIIATG- 148 (470)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTCEE--EESCEEE-E--ET--TEEEECCSSS-----CCEE-EECSEEEECCC-
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEeEEEE-e--cC--CEEEEEeCCC-----ceEE-EEcCEEEECCC-
Confidence 1112 2233444555667654 7776543 3 22 4566665443 1156 89999999999
Q ss_pred CCCCCCCCCCCccccccCCCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeeehhh
Q 022090 148 TTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREM 227 (303)
Q Consensus 148 ~~~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp~~~ 227 (303)
+.|..|+++|.+.. .++++.+... ....+++++|||+|.+|+|+|..|.+.|.+||+++|++ .++|..+
T Consensus 149 -s~p~~p~~~g~~~~--------~v~~~~~~~~-~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~-~~l~~~~ 217 (470)
T 1dxl_A 149 -SDVKSLPGVTIDEK--------KIVSSTGALA-LSEIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFAS-EIVPTMD 217 (470)
T ss_dssp -EEECCBTTBCCCSS--------SEECHHHHTT-CSSCCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSS-SSSTTSC
T ss_pred -CCCCCCCCCCCCcc--------cEEeHHHhhh-hhhcCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC-ccccccc
Confidence 77888888876431 3566655544 22357999999999999999999999999999999998 7777655
Q ss_pred HHHHHHH
Q 022090 228 VYLGVVL 234 (303)
Q Consensus 228 ~~~~~~~ 234 (303)
.++...+
T Consensus 218 ~~~~~~l 224 (470)
T 1dxl_A 218 AEIRKQF 224 (470)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5554433
No 38
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.85 E-value=1.7e-21 Score=180.28 Aligned_cols=199 Identities=16% Similarity=0.169 Sum_probs=133.8
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcC-CCCceEEecCc----ccccCCCCC-CCCCCCCCCC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLAK----QFCQLPHLP-FPSSYPMFVS 79 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~-~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~ 79 (303)
.++||+|||||++|+++|..|++.|.+|+|||+++.+||.|.+. +.+...+.... ....+..+. ++.....+++
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 121 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTEKVVG 121 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTTCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHhhhhh
Confidence 45899999999999999999999999999999998889887532 11111000000 000011111 2222233445
Q ss_pred HHHHHHHHHH-------HH-----HHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCC
Q 022090 80 RAQFIEHLDH-------YV-----SHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (303)
Q Consensus 80 ~~~l~~~l~~-------~~-----~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~ 147 (303)
..++.+++.. .. +..+++. +++.+++.++. ++|.+. + .. +.||+||+|||
T Consensus 122 ~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~--~~~~~v~~i~~------~~v~~~-g-------~~-~~~d~lViATG- 183 (523)
T 1mo9_A 122 IKEVVDLFRAGRNGPHGIMNFQSKEQLNLEY--ILNCPAKVIDN------HTVEAA-G-------KV-FKAKNLILAVG- 183 (523)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHTSCCCE--EESSCCEEEET------TEEEET-T-------EE-EEBSCEEECCC-
T ss_pred HHHHHHHHHhhhhhhhhhhhhcccccCCcEE--EEeeEEEEeeC------CEEEEC-C-------EE-EEeCEEEECCC-
Confidence 6777776653 33 5556654 54667776642 245553 2 57 89999999999
Q ss_pred CCCCCCCCCCCccccccCCCCCccEEecccCC-CCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeeehh
Q 022090 148 TTNPFTPDIRGLCSFCSSATGTGEVIHSTQYK-NGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSRE 226 (303)
Q Consensus 148 ~~~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp~~ 226 (303)
+.|..|+++|.+. . .++++.++. ......+++++|||+|.+|+|+|..+.+.|.+||++++.+ .++|..
T Consensus 184 -s~p~~p~i~G~~~-------~-~v~~~~~~~~~l~~~~g~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~-~~l~~~ 253 (523)
T 1mo9_A 184 -AGPGTLDVPGVNA-------K-GVFDHATLVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTE-PLKLIK 253 (523)
T ss_dssp -EECCCCCSTTTTS-------B-TEEEHHHHHHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC-TTTTCC
T ss_pred -CCCCCCCCCCccc-------C-cEeeHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEecC-cccccc
Confidence 7888899998754 1 245655544 3222233999999999999999999999999999999998 676654
Q ss_pred hHHHHH
Q 022090 227 MVYLGV 232 (303)
Q Consensus 227 ~~~~~~ 232 (303)
+.++..
T Consensus 254 ~~~~~~ 259 (523)
T 1mo9_A 254 DNETRA 259 (523)
T ss_dssp SHHHHH
T ss_pred cHHHHH
Confidence 444433
No 39
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.85 E-value=4e-21 Score=175.84 Aligned_cols=203 Identities=12% Similarity=0.088 Sum_probs=130.5
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcC-CCCceEEecCcc----cc--cCCCCCCCCCCCCCC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLAKQ----FC--QLPHLPFPSSYPMFV 78 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~-~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~ 78 (303)
.++||+|||||++|+++|..|++.|.+|+|||+++.+||.|... +.+...+..... +. .+..+.++.. ....
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~-~~~~ 83 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMS-EVRL 83 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEES-CEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccC-CCcc
Confidence 35799999999999999999999999999999998899987542 111110000000 00 0000000000 0011
Q ss_pred CHHHHHHH-----------HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCC
Q 022090 79 SRAQFIEH-----------LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (303)
Q Consensus 79 ~~~~l~~~-----------l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~ 147 (303)
+...+..+ +...++..+++. +.++. ..+ +. ..+.|...++. ..+ +.||+||+|||
T Consensus 84 ~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~--~~g~~-~~~--~~--~~~~v~~~~gg-----~~~-~~~d~lViAtG- 149 (474)
T 1zmd_A 84 NLDKMMEQKSTAVKALTGGIAHLFKQNKVVH--VNGYG-KIT--GK--NQVTATKADGG-----TQV-IDTKNILIATG- 149 (474)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEE--EESEE-EEE--ET--TEEEEECTTSC-----EEE-EEEEEEEECCC-
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEEEE-EEe--cC--CEEEEEecCCC-----cEE-EEeCEEEECCC-
Confidence 22333332 244455566654 66653 333 22 45667654311 146 89999999999
Q ss_pred CCCCCCCCCCCccccccCCCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeee-hh
Q 022090 148 TTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLS-RE 226 (303)
Q Consensus 148 ~~~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp-~~ 226 (303)
+.|..|+++|.+.. .++++.++... ...+++++|||+|.+|+|+|..|++.|.+||++++++ +++| ..
T Consensus 150 -s~p~~p~i~g~~~~--------~v~t~~~~~~~-~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~ 218 (474)
T 1zmd_A 150 -SEVTPFPGITIDED--------TIVSSTGALSL-KKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLG-HVGGVGI 218 (474)
T ss_dssp -EEECCCTTCCCCSS--------SEECHHHHTTC-SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSCSSC
T ss_pred -CCCCCCCCCCCCcC--------cEEcHHHHhhc-cccCceEEEECCCHHHHHHHHHHHHcCCEEEEEeccC-ccCCccc
Confidence 77888888886531 35666655542 2347999999999999999999999999999999998 7777 54
Q ss_pred hHHHHHHH
Q 022090 227 MVYLGVVL 234 (303)
Q Consensus 227 ~~~~~~~~ 234 (303)
+.++...+
T Consensus 219 ~~~~~~~l 226 (474)
T 1zmd_A 219 DMEISKNF 226 (474)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHH
Confidence 44444433
No 40
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.85 E-value=3.6e-22 Score=182.97 Aligned_cols=198 Identities=20% Similarity=0.206 Sum_probs=126.7
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCc-CCCCceEEecC----cccccCCCCCCCCCCCCCCCHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHLA----KQFCQLPHLPFPSSYPMFVSRA 81 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 81 (303)
.+||+|||||++|+++|..|++.|.+|+|||++ .+||.|.+ .+.+...+... .....+..+.++.. ....+..
T Consensus 20 ~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~-~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~-~~~~~~~ 97 (478)
T 3dk9_A 20 SYDYLVIGGGSGGLASARRAAELGARAAVVESH-KLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSC-EGKFNWR 97 (478)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCC-CCCCCHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCC-CCccCHH
Confidence 589999999999999999999999999999987 57776543 22222111000 01111122222211 1233455
Q ss_pred HHHHHHHHHH-----------HHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCC
Q 022090 82 QFIEHLDHYV-----------SHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN 150 (303)
Q Consensus 82 ~l~~~l~~~~-----------~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~ 150 (303)
.+.++...++ +..+++. ..+. +..++ ...+.|... + .+ +.||+||+||| +.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~--~~g~-~~~~~----~~~~~v~~~-g-------~~-~~~d~lviAtG--~~ 159 (478)
T 3dk9_A 98 VIKEKRDAYVSRLNAIYQNNLTKSHIEI--IRGH-AAFTS----DPKPTIEVS-G-------KK-YTAPHILIATG--GM 159 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEE--EESC-EEECS----CSSCEEEET-T-------EE-EECSCEEECCC--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEE--EEeE-EEEee----CCeEEEEEC-C-------EE-EEeeEEEEccC--CC
Confidence 5555544433 3334332 3332 22221 123566632 2 57 89999999999 78
Q ss_pred CCCC---CCCCccccccCCCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeeehhh
Q 022090 151 PFTP---DIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREM 227 (303)
Q Consensus 151 p~~p---~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp~~~ 227 (303)
|..| ++||.+.. +++.++.. ....+++++|||+|.+|+|+|..|++.|.+||+++|.+ .++|..+
T Consensus 160 p~~p~~~~i~G~~~~----------~~~~~~~~-~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d 227 (478)
T 3dk9_A 160 PSTPHESQIPGASLG----------ITSDGFFQ-LEELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHD-KVLRSFD 227 (478)
T ss_dssp ECCCCTTTSTTGGGS----------BCHHHHTT-CCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSCTTSC
T ss_pred CCCCCcCCCCCCcee----------EchHHhhc-hhhcCccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCC-ccccccC
Confidence 8888 88887632 34444433 23347999999999999999999999999999999998 6777766
Q ss_pred HHHHHHHHh
Q 022090 228 VYLGVVLFK 236 (303)
Q Consensus 228 ~~~~~~~~~ 236 (303)
.++...+.+
T Consensus 228 ~~~~~~~~~ 236 (478)
T 3dk9_A 228 SMISTNCTE 236 (478)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 655544433
No 41
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=99.85 E-value=9e-22 Score=178.97 Aligned_cols=185 Identities=19% Similarity=0.292 Sum_probs=121.5
Q ss_pred CCcEEEECCcHHHHHHHHHHhhC--CCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~--g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 84 (303)
++||+|||||++|+++|..|++. +.+|+|||+++..+.... .++. .........++.
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~----------------~~p~-----~~~~~~~~~~~~ 61 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPC----------------GIPY-----VVEGLSTPDKLM 61 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC-----------------------------------------
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCc----------------CCcc-----ccCCCCCHHHhh
Confidence 47999999999999999999998 789999999986542210 0000 001111222333
Q ss_pred HHH-HHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCCccccc
Q 022090 85 EHL-DHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFC 163 (303)
Q Consensus 85 ~~l-~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~~~ 163 (303)
.+. ..+.++++++. +++++|++++.. .+.|...++ ..+ +.||+||+||| +.|..|++||.+.
T Consensus 62 ~~~~~~~~~~~gi~v--~~~~~v~~i~~~----~~~v~~~~g------~~~-~~~d~lviAtG--~~p~~p~i~G~~~-- 124 (449)
T 3kd9_A 62 YYPPEVFIKKRGIDL--HLNAEVIEVDTG----YVRVRENGG------EKS-YEWDYLVFANG--ASPQVPAIEGVNL-- 124 (449)
T ss_dssp ----CTHHHHTTCEE--ETTCEEEEECSS----EEEEECSSS------EEE-EECSEEEECCC--EEECCCSCBTTTS--
T ss_pred hcCHHHHHHhcCcEE--EecCEEEEEecC----CCEEEECCc------eEE-EEcCEEEECCC--CCCCCCCCCCCCC--
Confidence 333 33446677665 889999988543 366765432 147 89999999999 7888889988753
Q ss_pred cCCCCCccEEecccCCC-------CCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeeeh-hhHHHHHHHH
Q 022090 164 SSATGTGEVIHSTQYKN-------GKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSR-EMVYLGVVLF 235 (303)
Q Consensus 164 ~~~~~~g~~~~~~~~~~-------~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp~-~~~~~~~~~~ 235 (303)
.+ ++....... .....+++++|||+|.+|+|+|..+.+.|.+||+++|.+ ++++. .+.++...+.
T Consensus 125 -----~~-v~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~~~~~~l~ 197 (449)
T 3kd9_A 125 -----KG-VFTADLPPDALAIREYMEKYKVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGE-RVLRRSFDKEVTDILE 197 (449)
T ss_dssp -----TT-EECSCSTHHHHHHHHHHSSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-STTTTTSCHHHHHHHH
T ss_pred -----CC-EEEeCCHHHHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCC-ccchhhcCHHHHHHHH
Confidence 22 222221110 112357899999999999999999999999999999998 67766 5544444433
Q ss_pred h
Q 022090 236 K 236 (303)
Q Consensus 236 ~ 236 (303)
+
T Consensus 198 ~ 198 (449)
T 3kd9_A 198 E 198 (449)
T ss_dssp H
T ss_pred H
Confidence 3
No 42
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.85 E-value=2.5e-21 Score=176.99 Aligned_cols=203 Identities=14% Similarity=0.134 Sum_probs=129.1
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcC-CCCceEEecCcc----ccc-CCCCCCCCCCCCCCCH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLAKQ----FCQ-LPHLPFPSSYPMFVSR 80 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~-~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~ 80 (303)
++||+|||||++|+++|..|++.|.+|+|||+++.+||.|.+. +.+...+..... +.. +..+..+.......+.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 81 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMDS 81 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEECH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 4799999999999999999999999999999998899987532 111110000000 000 0000000000001122
Q ss_pred HHHHH-----------HHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCC
Q 022090 81 AQFIE-----------HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETT 149 (303)
Q Consensus 81 ~~l~~-----------~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~ 149 (303)
..+.. .+...+++.+++. +.++.+ .+ +. ..+.|...++ +..+ +.||+||+||| +
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~v~~--~~g~~~-~i--~~--~~~~v~~~~G-----~~~~-~~~d~lviAtG--~ 146 (468)
T 2qae_A 82 AKMQQQKERAVKGLTGGVEYLFKKNKVTY--YKGEGS-FE--TA--HSIRVNGLDG-----KQEM-LETKKTIIATG--S 146 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEE--EEEEEE-EE--ET--TEEEEEETTS-----CEEE-EEEEEEEECCC--E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEEEEE-Ee--eC--CEEEEEecCC-----ceEE-EEcCEEEECCC--C
Confidence 23322 2344555566654 555533 33 22 4566665443 2256 89999999999 7
Q ss_pred CCCCCCCCCccccccCCCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeeehhhHH
Q 022090 150 NPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREMVY 229 (303)
Q Consensus 150 ~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp~~~~~ 229 (303)
.|..|+++|.+. . .++++.+... ....+++++|||+|.+|+|+|..|.+.|.+||+++|.+ +++|..+.+
T Consensus 147 ~p~~p~~~g~~~-------~-~v~t~~~~~~-~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~~ 216 (468)
T 2qae_A 147 EPTELPFLPFDE-------K-VVLSSTGALA-LPRVPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAP-RCAPTLDED 216 (468)
T ss_dssp EECCBTTBCCCS-------S-SEECHHHHHT-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCHH
T ss_pred CcCCCCCCCCCc-------C-ceechHHHhh-cccCCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCC-cccccCCHH
Confidence 788888887643 1 2455555443 22357999999999999999999999999999999998 777765555
Q ss_pred HHHHH
Q 022090 230 LGVVL 234 (303)
Q Consensus 230 ~~~~~ 234 (303)
+...+
T Consensus 217 ~~~~l 221 (468)
T 2qae_A 217 VTNAL 221 (468)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44433
No 43
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.85 E-value=2.8e-22 Score=184.10 Aligned_cols=202 Identities=16% Similarity=0.162 Sum_probs=127.5
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEec--------CCCCCCccCc-CCCCceEEecCcc----cccCCCCCCCC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILER--------ENCYASIWKK-YSYDRLRLHLAKQ----FCQLPHLPFPS 72 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~--------~~~~gg~w~~-~~~~~~~~~~~~~----~~~~~~~~~~~ 72 (303)
..+||+|||||++|+++|..|++.|.+|+|||+ ...+||+|.+ .+.|+..+..... ......+.+..
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~ 84 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEV 84 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCccc
Confidence 458999999999999999999999999999997 5568887753 2222221110000 00011111111
Q ss_pred CCCCCCCHHHHHHHHHHHHH-----------HcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEE
Q 022090 73 SYPMFVSRAQFIEHLDHYVS-----------HFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFL 141 (303)
Q Consensus 73 ~~~~~~~~~~l~~~l~~~~~-----------~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~v 141 (303)
..+...+...+.++...+.+ ..+++ .+...+..++ ...+.|...++ +..+ +.||+|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~---~i~g~~~~~~----~~~v~v~~~~g-----~~~~-~~~d~l 151 (488)
T 3dgz_A 85 AQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVK---YFNIKASFVD----EHTVRGVDKGG-----KATL-LSAEHI 151 (488)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE---EECCEEEESS----SSEEEEECTTS-----CEEE-EEEEEE
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE---EEEEEEEEcc----CCeEEEEeCCC-----ceEE-EECCEE
Confidence 11234455566666554433 22332 2233333221 23344544332 2257 899999
Q ss_pred EEccCCCCCCCCCC-CCCccccccCCCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCe
Q 022090 142 VVASGETTNPFTPD-IRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPV 220 (303)
Q Consensus 142 IlAtG~~~~p~~p~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~ 220 (303)
|+||| +.|..|+ +||.+.. .+++.++.. ....+++++|||+|.+|+|+|..|++.|.+||+++|.+
T Consensus 152 ViATG--s~p~~p~~i~G~~~~---------~~~~~~~~~-~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~- 218 (488)
T 3dgz_A 152 VIATG--GRPRYPTQVKGALEY---------GITSDDIFW-LKESPGKTLVVGASYVALECAGFLTGIGLDTTVMMRSI- 218 (488)
T ss_dssp EECCC--EEECCCSSCBTHHHH---------CBCHHHHTT-CSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-
T ss_pred EEcCC--CCCCCCCCCCCcccc---------cCcHHHHHh-hhhcCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCc-
Confidence 99999 8888998 9997543 234444433 33457899999999999999999999999999999864
Q ss_pred eeeehhhHHHHHHH
Q 022090 221 HVLSREMVYLGVVL 234 (303)
Q Consensus 221 ~~lp~~~~~~~~~~ 234 (303)
++|..+.++...+
T Consensus 219 -~l~~~d~~~~~~l 231 (488)
T 3dgz_A 219 -PLRGFDQQMSSLV 231 (488)
T ss_dssp -SSTTSCHHHHHHH
T ss_pred -ccccCCHHHHHHH
Confidence 5666555554443
No 44
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.85 E-value=5e-22 Score=186.51 Aligned_cols=192 Identities=16% Similarity=0.257 Sum_probs=133.3
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhC--CCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHH
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQF 83 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~--g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 83 (303)
.+++|+|||||++|+++|..|++. |.+|+|||+++..+ |....+ +.. +... .......+
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~-------~~~~~l--p~~---~~g~-------~~~~~~~~ 95 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYIS-------FANCGL--PYY---IGGV-------ITERQKLL 95 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSS-------BCGGGH--HHH---HTTS-------SCCGGGGB
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcc-------ccCCCC--chh---hcCc-------CCChHHhh
Confidence 357999999999999999999998 89999999998764 111000 000 0000 00112234
Q ss_pred HHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCCccccc
Q 022090 84 IEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFC 163 (303)
Q Consensus 84 ~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~~~ 163 (303)
..++.++.+++++.. +++++|++++.+. ..+.+.....+ +... +.||+||+||| +.|..|++||.+..
T Consensus 96 ~~~~~~~~~~~gi~v--~~~~~V~~id~~~--~~v~v~~~~~g----~~~~-~~~d~lviAtG--~~p~~p~i~G~~~~- 163 (588)
T 3ics_A 96 VQTVERMSKRFNLDI--RVLSEVVKINKEE--KTITIKNVTTN----ETYN-EAYDVLILSPG--AKPIVPSIPGIEEA- 163 (588)
T ss_dssp SSCHHHHHHHTTCEE--ECSEEEEEEETTT--TEEEEEETTTC----CEEE-EECSEEEECCC--EEECCCCCTTTTTC-
T ss_pred ccCHHHHHHhcCcEE--EECCEEEEEECCC--CEEEEeecCCC----CEEE-EeCCEEEECCC--CCCCCCCCCCcccC-
Confidence 456777777888765 8999999998655 44554432111 2246 89999999999 78889999998433
Q ss_pred cCCCCCccEEecccCCCCC-------CCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeeehhhHHHHHHHH
Q 022090 164 SSATGTGEVIHSTQYKNGK-------PYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREMVYLGVVLF 235 (303)
Q Consensus 164 ~~~~~~g~~~~~~~~~~~~-------~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp~~~~~~~~~~~ 235 (303)
.+ +++.....+.. ...+++++|||+|.+|+|+|..+++.|.+||+++|.+ +++|..+.++...+.
T Consensus 164 -----~~-v~~~~~~~~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~~~~~l~ 235 (588)
T 3ics_A 164 -----KA-LFTLRNVPDTDRIKAYIDEKKPRHATVIGGGFIGVEMVENLRERGIEVTLVEMAN-QVMPPIDYEMAAYVH 235 (588)
T ss_dssp -----TT-EEECSSHHHHHHHHHHHHHHCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSCTTSCHHHHHHHH
T ss_pred -----CC-eEEeCCHHHHHHHHHHHhhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-cccccCCHHHHHHHH
Confidence 32 34433322211 1357999999999999999999999999999999998 788876555544443
No 45
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.85 E-value=9.1e-22 Score=180.76 Aligned_cols=178 Identities=20% Similarity=0.285 Sum_probs=119.6
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCC---CCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQS---IPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQF 83 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g---~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 83 (303)
++||+|||||++|+++|..|++.| .+|+|||+++..+..+.. +....... ...+. ++
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~-----~~~~~~~~------~~~~~---------~~ 94 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAG-----MALWIGEQ------IAGPE---------GL 94 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGG-----HHHHHTTS------SSCSG---------GG
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccc-----cchhhcCc------cCCHH---------Hh
Confidence 489999999999999999999988 999999998865422110 00000000 00000 11
Q ss_pred HHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCCcc---
Q 022090 84 IEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLC--- 160 (303)
Q Consensus 84 ~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~--- 160 (303)
.....+.+++++++. +++++|+.++.++ +.+.+.. ++ +..+ +.||+||+||| +.|..|++||.+
T Consensus 95 ~~~~~~~~~~~gv~v--~~~~~v~~i~~~~--~~v~v~~-~g-----~~~~-~~~d~lviAtG--~~p~~p~i~G~~~~~ 161 (490)
T 2bc0_A 95 FYSDKEELESLGAKV--YMESPVQSIDYDA--KTVTALV-DG-----KNHV-ETYDKLIFATG--SQPILPPIKGAEIKE 161 (490)
T ss_dssp BSCCHHHHHHTTCEE--ETTCCEEEEETTT--TEEEEEE-TT-----EEEE-EECSEEEECCC--EEECCCSCBTCCBCT
T ss_pred hhcCHHHHHhCCCEE--EeCCEEEEEECCC--CEEEEEe-CC-----cEEE-EECCEEEECCC--CCcCCCCCCCccccc
Confidence 111123344566654 7889999987654 4454432 22 1257 89999999999 788888899876
Q ss_pred ---ccccCCCCCc---cEEecccCCCC-------CCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeee
Q 022090 161 ---SFCSSATGTG---EVIHSTQYKNG-------KPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLS 224 (303)
Q Consensus 161 ---~~~~~~~~~g---~~~~~~~~~~~-------~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp 224 (303)
.| .+ .+++...+.+. ....+++++|||+|.+|+|+|..|++.|.+||+++|.+ +++|
T Consensus 162 ~~~~f------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~l~ 231 (490)
T 2bc0_A 162 GSLEF------EATLENLQFVKLYQNSADVIAKLENKDIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVD-TCLA 231 (490)
T ss_dssp TCTTC------CBSSTTEEECSSHHHHHHHHHHTTSTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-STTT
T ss_pred ccccc------ccccCCEEEeCCHHHHHHHHHHhhhcCCceEEEECCCHHHHHHHHHHHHCCCeEEEEEccc-chhh
Confidence 33 21 24443322111 11458999999999999999999999999999999998 6666
No 46
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.85 E-value=3.4e-22 Score=186.82 Aligned_cols=188 Identities=16% Similarity=0.196 Sum_probs=129.2
Q ss_pred CcEEEECCcHHHHHHHHHHhhC--CCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHH
Q 022090 8 VEVIMVGAGTSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~--g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 85 (303)
++|+|||||++|+++|..|++. +.+|+|||+++..+ |....+ +.. +... .......+..
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~-------~~~~~l--~~~---~~~~-------~~~~~~~~~~ 62 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVS-------FANCGL--PYH---ISGE-------IAQRSALVLQ 62 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSS-------BCGGGH--HHH---HTSS-------SCCGGGGBCC
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcc-------ccccCc--hHH---hcCC-------cCChHHhhcc
Confidence 5899999999999999999998 78999999998764 111000 000 0000 0011223445
Q ss_pred HHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCCccccccC
Q 022090 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSS 165 (303)
Q Consensus 86 ~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~~~~~ 165 (303)
++..+.+++++.. +++++|++++... ..+.+.....+ +..+ +.||+||+||| +.|..|++||.+..
T Consensus 63 ~~~~~~~~~~i~~--~~~~~V~~id~~~--~~v~~~~~~~g----~~~~-~~~d~lviAtG--~~p~~p~ipG~~~~--- 128 (565)
T 3ntd_A 63 TPESFKARFNVEV--RVKHEVVAIDRAA--KLVTVRRLLDG----SEYQ-ESYDTLLLSPG--AAPIVPPIPGVDNP--- 128 (565)
T ss_dssp CHHHHHHHHCCEE--ETTEEEEEEETTT--TEEEEEETTTC----CEEE-EECSEEEECCC--EEECCCCCTTCCST---
T ss_pred CHHHHHHhcCcEE--EECCEEEEEECCC--CEEEEEecCCC----CeEE-EECCEEEECCC--CCCCCCCCCCCCCC---
Confidence 5666677778765 8899999997655 44554432111 2257 89999999999 78889999997642
Q ss_pred CCCCccEEecccCCCC-------CCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeeehhhHHHHHHH
Q 022090 166 ATGTGEVIHSTQYKNG-------KPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREMVYLGVVL 234 (303)
Q Consensus 166 ~~~~g~~~~~~~~~~~-------~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp~~~~~~~~~~ 234 (303)
.+++....... ....+++++|||+|.+|+|+|..|++.|.+||+++|.+ .++|..+.++...+
T Consensus 129 -----~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~~~~~l 198 (565)
T 3ntd_A 129 -----LTHSLRNIPDMDRILQTIQMNNVEHATVVGGGFIGLEMMESLHHLGIKTTLLELAD-QVMTPVDREMAGFA 198 (565)
T ss_dssp -----TEECCSSHHHHHHHHHHHHHTTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSCTTSCHHHHHHH
T ss_pred -----CEEEeCCHHHHHHHHHHHhhCCCCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCC-ccchhcCHHHHHHH
Confidence 22332221110 11347899999999999999999999999999999999 77776555554443
No 47
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=99.85 E-value=5.1e-21 Score=175.87 Aligned_cols=206 Identities=16% Similarity=0.141 Sum_probs=129.6
Q ss_pred CCcEEEECCcHHHHHHHHHHhh-CCCCeEEEe--------cCCCCCCccCc-CCCCceEEecCcc----cccCCCCCCCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSL-QSIPYVILE--------RENCYASIWKK-YSYDRLRLHLAKQ----FCQLPHLPFPS 72 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~-~g~~v~iie--------~~~~~gg~w~~-~~~~~~~~~~~~~----~~~~~~~~~~~ 72 (303)
++||+|||||++|+++|..|++ .|.+|+||| +...+||+|.+ .++|...+..... +..+..+.+..
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~ 86 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWEF 86 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhcCccc
Confidence 5799999999999999999999 999999999 35678887754 2222211100000 00011111110
Q ss_pred CCC-CCCCHHHHHHHHHHHH-----------HHc-CCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCC-CceeEEEEee
Q 022090 73 SYP-MFVSRAQFIEHLDHYV-----------SHF-NIGPSIRYQRSVESASYDEATNMWNVKASNLLSP-GREIEEYYSG 138 (303)
Q Consensus 73 ~~~-~~~~~~~l~~~l~~~~-----------~~~-~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~-~~~~~~~~~a 138 (303)
..+ ...+...+.++..+++ +.. +++. +.++ ++.++ . ++|.+.+..+. ...... +.|
T Consensus 87 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~--~~g~-~~~i~--~----~~v~v~~~~~~~~~~~~~-~~~ 156 (495)
T 2wpf_A 87 DGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDF--FLGW-GSLES--K----NVVVVRETADPKSAVKER-LQA 156 (495)
T ss_dssp CGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEE--EESE-EEEEE--T----TEEEEESSSSTTSCEEEE-EEE
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE--EEeE-EEEee--C----CEEEEeecCCccCCCCeE-EEc
Confidence 000 0234455655554433 233 4433 4443 44442 2 45665521110 000157 899
Q ss_pred CEEEEccCCCCCCCCCCCCCccccccCCCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhc---cCceEEE
Q 022090 139 RFLVVASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANH---AAKTSLV 215 (303)
Q Consensus 139 d~vIlAtG~~~~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~---g~~vt~~ 215 (303)
|+||+||| +.|..|++||.+.. +++.++.. ....+++++|||+|.+|+|+|..|++. |.+||++
T Consensus 157 d~lViATG--s~p~~p~i~G~~~~----------~~~~~~~~-~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv 223 (495)
T 2wpf_A 157 DHILLATG--SWPQMPAIPGIEHC----------ISSNEAFY-LPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLC 223 (495)
T ss_dssp EEEEECCC--EEECCCCCTTGGGC----------EEHHHHTT-CSSCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CEEEEeCC--CCcCCCCCCCcccc----------ccHHHHHh-hhhcCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEE
Confidence 99999999 78888889987532 55555544 223578999999999999999999999 9999999
Q ss_pred eecCeeeeehhhHHHHHHHHh
Q 022090 216 VRSPVHVLSREMVYLGVVLFK 236 (303)
Q Consensus 216 ~r~~~~~lp~~~~~~~~~~~~ 236 (303)
+|.+ +++|..+.+++..+.+
T Consensus 224 ~~~~-~~l~~~d~~~~~~l~~ 243 (495)
T 2wpf_A 224 YRNN-LILRGFDETIREEVTK 243 (495)
T ss_dssp ESSS-SSCTTSCHHHHHHHHH
T ss_pred EcCC-ccccccCHHHHHHHHH
Confidence 9998 7777766555544433
No 48
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.84 E-value=4.1e-21 Score=176.79 Aligned_cols=200 Identities=19% Similarity=0.241 Sum_probs=120.2
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcC-CCCceEEecC----cccccCCCCCCCCCCCCCCCHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLA----KQFCQLPHLPFPSSYPMFVSRA 81 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 81 (303)
++||+|||||++|+++|..|++.|.+|+|||++. .||.|.+. +.+...+... ........+.+... ...+..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~--~~~~~~ 78 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR-LGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTK--FSFNLP 78 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-TTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCC--CCCCHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC-cCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccC--CccCHH
Confidence 3799999999999999999999999999999985 78887542 1121100000 00000011111100 112333
Q ss_pred HHHH-----------HHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEe--------ecCCCCceeEEEEeeCEEE
Q 022090 82 QFIE-----------HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKAS--------NLLSPGREIEEYYSGRFLV 142 (303)
Q Consensus 82 ~l~~-----------~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~--------~~~~~~~~~~~~~~ad~vI 142 (303)
.+.. ++...++..+++. +.++. ..++. ..+.+... ....+ .+ +.||+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~--~~g~~-~~id~----~~v~v~~~~~~~~~~~~~~~~----~~-~~~d~lV 146 (500)
T 1onf_A 79 LLVERRDKYIQRLNNIYRQNLSKDKVDL--YEGTA-SFLSE----NRILIKGTKDNNNKDNGPLNE----EI-LEGRNIL 146 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEE--EESCC-CCC-----------------------------------CBSSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEeEE-EEeeC----CEEEEEeccccccccccCCCc----eE-EEeCEEE
Confidence 3332 2333344556544 44432 22221 22333220 00001 46 8999999
Q ss_pred EccCCCCCCCCCCCCCccccccCCCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeee
Q 022090 143 VASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHV 222 (303)
Q Consensus 143 lAtG~~~~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~ 222 (303)
+||| +.|..|++||.+.. +++.++..... +++++|||+|.+|+|+|..|++.|.+||+++|.+ ++
T Consensus 147 iAtG--s~p~~p~i~G~~~~----------~~~~~~~~~~~--~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~ 211 (500)
T 1onf_A 147 IAVG--NKPVFPPVKGIENT----------ISSDEFFNIKE--SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGN-RI 211 (500)
T ss_dssp ECCC--CCBCCCSCTTGGGC----------EEHHHHTTCCC--CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSS-SS
T ss_pred ECCC--CCCCCCCCCCCCcc----------cCHHHHhccCC--CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCC-cc
Confidence 9999 78888999987532 56655554332 8999999999999999999999999999999998 77
Q ss_pred eehhhHHHHHHHHh
Q 022090 223 LSREMVYLGVVLFK 236 (303)
Q Consensus 223 lp~~~~~~~~~~~~ 236 (303)
+|..+.+++..+.+
T Consensus 212 l~~~d~~~~~~l~~ 225 (500)
T 1onf_A 212 LRKFDESVINVLEN 225 (500)
T ss_dssp CTTSCHHHHHHHHH
T ss_pred CcccchhhHHHHHH
Confidence 78766655544433
No 49
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=99.84 E-value=2e-21 Score=177.72 Aligned_cols=193 Identities=13% Similarity=0.181 Sum_probs=113.2
Q ss_pred CCcEEEECCcHHHHHHHHHHhhC--CCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~--g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 84 (303)
++||+|||||++|+++|..|++. |.+|+|||+++..+ |.....+.. .... ...+. ..++...++.
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~--~~~~gl~~~---~~g~------~~~~~--~~~~~~~~~~ 69 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRIS--YGGCGIPYY---VSGE------VSNIE--SLQATPYNVV 69 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---------------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccc--ccccccchh---hcCC------CCchH--Hhccccchhc
Confidence 36999999999999999999998 89999999998754 111000000 0000 00000 0001111245
Q ss_pred HHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCCcccccc
Q 022090 85 EHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCS 164 (303)
Q Consensus 85 ~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~~~~ 164 (303)
.+...+.+.+++.. +++++|++++... ..+.+..... + +... +.||+||+||| +.|..|++||.+.
T Consensus 70 ~~~~~~~~~~gi~~--~~~~~V~~id~~~--~~v~~~~~~~--g--~~~~-~~~d~lviAtG--~~p~~p~i~G~~~--- 135 (472)
T 3iwa_A 70 RDPEFFRINKDVEA--LVETRAHAIDRAA--HTVEIENLRT--G--ERRT-LKYDKLVLALG--SKANRPPVEGMDL--- 135 (472)
T ss_dssp -----------CEE--ECSEEEEEEETTT--TEEEEEETTT--C--CEEE-EECSEEEECCC--EEECCCSCTTTTS---
T ss_pred cCHHHHhhhcCcEE--EECCEEEEEECCC--CEEEEeecCC--C--CEEE-EECCEEEEeCC--CCcCCCCCCCCCC---
Confidence 56666666667655 8899999997655 4454443111 1 2247 89999999999 7888899998762
Q ss_pred CCCCCccEEecccCCCC-------CCCCCCeEEEECCCccHHHHHHHHhhc-cCceEEEeecCeeeee-hhhHHHHH
Q 022090 165 SATGTGEVIHSTQYKNG-------KPYGGKNVLVVGSGNSGMEIALDLANH-AAKTSLVVRSPVHVLS-REMVYLGV 232 (303)
Q Consensus 165 ~~~~~g~~~~~~~~~~~-------~~~~~~~v~ViG~G~~g~e~a~~l~~~-g~~vt~~~r~~~~~lp-~~~~~~~~ 232 (303)
.+ +++.....+. ....+++++|||+|.+|+|+|..+.+. |.+||+++|.+ .++| ..+..+..
T Consensus 136 ----~~-v~~~~~~~~~~~l~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~-~~l~~~~~~~~~~ 206 (472)
T 3iwa_A 136 ----AG-VTPVTNLDEAEFVQHAISAGEVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELAD-QIMPGFTSKSLSQ 206 (472)
T ss_dssp ----BT-EEECCSHHHHHHHHHHCCTTSCSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSS-SSSTTTSCHHHHH
T ss_pred ----CC-EEEeCCHHHHHHHHHHhhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccC-cccccccCHHHHH
Confidence 22 2332221110 113478999999999999999999999 99999999998 7777 44444433
No 50
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.84 E-value=6.5e-21 Score=173.91 Aligned_cols=194 Identities=15% Similarity=0.151 Sum_probs=123.3
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcC-CCCceEEecCccc----ccCCCCCCCCCCCCCCCHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLAKQF----CQLPHLPFPSSYPMFVSRA 81 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 81 (303)
++||+|||||++|+++|..|++.|.+|+|||+++ +||+|.+. +.+...+...... ..+..+.++ . ....+..
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~-~-~~~~~~~ 82 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLK-A-KPELDLK 82 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEE-C-CCEECHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCC-C-CCCcCHH
Confidence 5899999999999999999999999999999988 88877532 1111100000000 000000000 0 0112223
Q ss_pred HHHHH-----------HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCC
Q 022090 82 QFIEH-----------LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN 150 (303)
Q Consensus 82 ~l~~~-----------l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~ 150 (303)
.+..+ +...++..+++. +.++.+. + +. ++|.+. + .+ +.||+||+||| +.
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~--~~g~~~~-~--~~----~~v~v~-g-------~~-~~~d~lViATG--s~ 142 (464)
T 2eq6_A 83 KLGGWRDQVVKKLTGGVGTLLKGNGVEL--LRGFARL-V--GP----KEVEVG-G-------ER-YGAKSLILATG--SE 142 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEE--EESCEEE-E--ET----TEEEET-T-------EE-EEEEEEEECCC--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEE--EeeeEEE-c--cC----CEEEEc-c-------EE-EEeCEEEEcCC--CC
Confidence 33322 233445556554 6665432 3 22 244443 2 56 89999999999 77
Q ss_pred CCCCC-CCCccccccCCCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeeehhhHH
Q 022090 151 PFTPD-IRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREMVY 229 (303)
Q Consensus 151 p~~p~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp~~~~~ 229 (303)
|..|+ +++.. .++++.+........+++++|||+|.+|+|+|..|++.|.+||++++.+ +++|..+.+
T Consensus 143 p~~p~gi~~~~----------~v~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~ 211 (464)
T 2eq6_A 143 PLELKGFPFGE----------DVWDSTRALKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMP-EILPQGDPE 211 (464)
T ss_dssp ECCBTTBCCSS----------SEECHHHHTCGGGCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCHH
T ss_pred CCCCCCCCCCC----------cEEcHHHHHhhhhhcCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCC-ccccccCHH
Confidence 77775 65521 3466665554333257999999999999999999999999999999998 777765555
Q ss_pred HHHHH
Q 022090 230 LGVVL 234 (303)
Q Consensus 230 ~~~~~ 234 (303)
+...+
T Consensus 212 ~~~~l 216 (464)
T 2eq6_A 212 TAALL 216 (464)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 54443
No 51
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.84 E-value=1.3e-20 Score=171.61 Aligned_cols=197 Identities=17% Similarity=0.195 Sum_probs=126.9
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCc-CCCCceEEecC----cccccCCC---CCCCCCCCCC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHLA----KQFCQLPH---LPFPSSYPMF 77 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~-~~~~~~~~~~~----~~~~~~~~---~~~~~~~~~~ 77 (303)
.++||+|||||++|+++|..|++.|.+|+|||+ +.+||.|.+ .+.|+..+... ..+..+.. +..+.. ...
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~-~~~ 81 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVA-SPR 81 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCC-CCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccC-CCc
Confidence 358999999999999999999999999999999 678887753 22221110000 00001111 111111 112
Q ss_pred CCHHHHHHHH-----------HHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccC
Q 022090 78 VSRAQFIEHL-----------DHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASG 146 (303)
Q Consensus 78 ~~~~~l~~~l-----------~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG 146 (303)
.+...+..+. ....++.+++. +.++.+. + +. ++|.+.+ .+ +.||+||+|||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~--~~g~~~~-~--~~----~~v~v~~--------~~-~~~d~lviATG 143 (458)
T 1lvl_A 82 LDIGQSVAWKDGIVDRLTTGVAALLKKHGVKV--VHGWAKV-L--DG----KQVEVDG--------QR-IQCEHLLLATG 143 (458)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEE--ECSCEEE-E--ET----TEEEETT--------EE-EECSEEEECCC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEE--EEEEEEE-c--cC----CEEEEee--------EE-EEeCEEEEeCC
Confidence 3444444442 23445566654 6665443 2 22 3555543 46 89999999999
Q ss_pred CCCCCCCCC-CCCccccccCCCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeeeh
Q 022090 147 ETTNPFTPD-IRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSR 225 (303)
Q Consensus 147 ~~~~p~~p~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp~ 225 (303)
+.|..|+ ++ + .+.++++.+.... ...+++++|||+|.+|+|+|..|++.|.+||++++.+ +++|.
T Consensus 144 --s~p~~~~~~~----~------~~~v~~~~~~~~~-~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~ 209 (458)
T 1lvl_A 144 --SSSVELPMLP----L------GGPVISSTEALAP-KALPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARE-RILPT 209 (458)
T ss_dssp --EEECCBTTBC----C------BTTEECHHHHTCC-SSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS-SSSTT
T ss_pred --CCCCCCCCCC----c------cCcEecHHHHhhh-hccCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCC-ccccc
Confidence 6676665 44 2 2245666665542 2357999999999999999999999999999999998 77776
Q ss_pred hhHHHHHHHHh
Q 022090 226 EMVYLGVVLFK 236 (303)
Q Consensus 226 ~~~~~~~~~~~ 236 (303)
.+.++...+.+
T Consensus 210 ~~~~~~~~l~~ 220 (458)
T 1lvl_A 210 YDSELTAPVAE 220 (458)
T ss_dssp SCHHHHHHHHH
T ss_pred cCHHHHHHHHH
Confidence 55555544433
No 52
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.84 E-value=1.4e-21 Score=179.29 Aligned_cols=201 Identities=18% Similarity=0.187 Sum_probs=126.1
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecC---C------CCCCccCc-CCCCceEEecCccc----ccCCCCCCC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERE---N------CYASIWKK-YSYDRLRLHLAKQF----CQLPHLPFP 71 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~---~------~~gg~w~~-~~~~~~~~~~~~~~----~~~~~~~~~ 71 (303)
..+||+|||||++|+++|..|+++|.+|+|||+. + .+||+|.+ .+.|+..+...... .....+.++
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~g~~ 87 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGWN 87 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhcCcc
Confidence 4689999999999999999999999999999942 1 37887753 22222111000000 000011111
Q ss_pred CCCCCCCCHHHHHHHHHHHHHH-----------cCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCE
Q 022090 72 SSYPMFVSRAQFIEHLDHYVSH-----------FNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRF 140 (303)
Q Consensus 72 ~~~~~~~~~~~l~~~l~~~~~~-----------~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~ 140 (303)
.......+...+.++...+++. .+++ .+......++ . ..+.|...++ + .+ +.||+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~---~~~g~a~~~~--~--~~v~v~~~~g-----~-~~-~~~d~ 153 (483)
T 3dgh_A 88 VDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVE---YINGLGSFVD--S--HTLLAKLKSG-----E-RT-ITAQT 153 (483)
T ss_dssp CCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE---EECSEEEEEE--T--TEEEEECTTC-----C-EE-EEEEE
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE---EEEeEEEEcc--C--CEEEEEeCCC-----e-EE-EEcCE
Confidence 1112234566666666554432 2332 2223333332 2 3355544332 1 57 89999
Q ss_pred EEEccCCCCCCCCCCCCCccccccCCCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCe
Q 022090 141 LVVASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPV 220 (303)
Q Consensus 141 vIlAtG~~~~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~ 220 (303)
||+||| +.|..|++||.+.+ .+++.++.. ....+++++|||+|.+|+|+|..+++.|.+||+++|.
T Consensus 154 lviATG--s~p~~p~i~G~~~~---------~~~~~~~~~-~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-- 219 (483)
T 3dgh_A 154 FVIAVG--GRPRYPDIPGAVEY---------GITSDDLFS-LDREPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRS-- 219 (483)
T ss_dssp EEECCC--EEECCCSSTTHHHH---------CBCHHHHTT-CSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS--
T ss_pred EEEeCC--CCcCCCCCCCcccc---------cCcHHHHhh-hhhcCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCC--
Confidence 999999 88899999997543 234444433 3345789999999999999999999999999999984
Q ss_pred eeeehhhHHHHHHH
Q 022090 221 HVLSREMVYLGVVL 234 (303)
Q Consensus 221 ~~lp~~~~~~~~~~ 234 (303)
.++|..+.++...+
T Consensus 220 ~~l~~~d~~~~~~l 233 (483)
T 3dgh_A 220 IVLRGFDQQMAELV 233 (483)
T ss_dssp CSSTTSCHHHHHHH
T ss_pred CCCcccCHHHHHHH
Confidence 46666555554443
No 53
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.84 E-value=1.4e-20 Score=171.34 Aligned_cols=199 Identities=17% Similarity=0.205 Sum_probs=127.3
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcC-CCCceEEecC----cccccCCCCCCCCCCCCCCCHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLA----KQFCQLPHLPFPSSYPMFVSRA 81 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 81 (303)
++||+|||||++|+++|..|++.|.+|+|+|++ .+||.|.+. +.+...+... ..+..+..+..+.. ....+..
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~-~~~~~~~ 80 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAE-NVTIDFA 80 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECC-SCEECHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccC-CCccCHH
Confidence 479999999999999999999999999999998 788877432 1111100000 00000000000000 0001222
Q ss_pred H-----------HHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCC
Q 022090 82 Q-----------FIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN 150 (303)
Q Consensus 82 ~-----------l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~ 150 (303)
. +..++...+++.+++. +.++.+. + +. +.+.|...++ + .+ +.||+||+||| +.
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~--~~g~~~~-i--d~--~~v~V~~~~G-----~-~~-i~~d~lViATG--s~ 144 (455)
T 1ebd_A 81 KVQEWKASVVKKLTGGVEGLLKGNKVEI--VKGEAYF-V--DA--NTVRVVNGDS-----A-QT-YTFKNAIIATG--SR 144 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEE--EESEEEE-E--ET--TEEEEEETTE-----E-EE-EECSEEEECCC--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEEEEEE-c--cC--CeEEEEeCCC-----c-EE-EEeCEEEEecC--CC
Confidence 2 3333445556666554 6666543 3 22 4577766442 1 46 89999999999 77
Q ss_pred CCCCCCCCccccccCCCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeeehhhHHH
Q 022090 151 PFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREMVYL 230 (303)
Q Consensus 151 p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp~~~~~~ 230 (303)
|..|+++|.+. .++++.+... ....+++++|||+|.+|+|+|..|++.|.+||++++.+ .++|..+.++
T Consensus 145 p~~~~~~g~~~---------~v~~~~~~~~-~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~~ 213 (455)
T 1ebd_A 145 PIELPNFKFSN---------RILDSTGALN-LGEVPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAG-EILSGFEKQM 213 (455)
T ss_dssp ECCBTTBCCCS---------SEECHHHHHT-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSSTTSCHHH
T ss_pred CCCCCCCCccc---------eEecHHHHhc-cccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC-ccccccCHHH
Confidence 88888877542 2455554433 22357999999999999999999999999999999998 7777655444
Q ss_pred HHHH
Q 022090 231 GVVL 234 (303)
Q Consensus 231 ~~~~ 234 (303)
...+
T Consensus 214 ~~~l 217 (455)
T 1ebd_A 214 AAII 217 (455)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
No 54
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=99.83 E-value=8.1e-21 Score=170.52 Aligned_cols=175 Identities=23% Similarity=0.267 Sum_probs=115.5
Q ss_pred CCCCCCCCcEEEECCcHHHHHHHHHHhhCCC--CeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCC
Q 022090 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQSI--PYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFV 78 (303)
Q Consensus 1 M~~~~~~~~vvIIGaG~aGl~~A~~l~~~g~--~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (303)
|+....++||+|||||++|+++|..|++.|. +|+++|+++..+ |.... .+..+..-. . +.. .
T Consensus 1 M~~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~-------~~~~~--~~~~~~~~~-~--~~~--~-- 64 (408)
T 2gqw_A 1 MSQEALKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERP-------YDRPP--LSKDFMAHG-D--AEK--I-- 64 (408)
T ss_dssp -----CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCC-------BCSGG--GGTHHHHHC-C--GGG--S--
T ss_pred CCCCCCCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCc-------ccCCC--CCHHHhCCC-c--hhh--h--
Confidence 6555567899999999999999999999998 599999987543 11000 000000000 0 000 0
Q ss_pred CHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCC-C
Q 022090 79 SRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDI-R 157 (303)
Q Consensus 79 ~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~-~ 157 (303)
++. .+++++++ ++++++|+.++... ++|.+.++ .+ +.||+||+||| +.|..|++ |
T Consensus 65 -------~~~-~~~~~~v~--~~~~~~v~~i~~~~----~~v~~~~g-------~~-~~~d~lviAtG--~~~~~~~i~~ 120 (408)
T 2gqw_A 65 -------RLD-CKRAPEVE--WLLGVTAQSFDPQA----HTVALSDG-------RT-LPYGTLVLATG--AAPRALPTLQ 120 (408)
T ss_dssp -------BCC-CTTSCSCE--EEETCCEEEEETTT----TEEEETTS-------CE-EECSEEEECCC--EEECCCGGGT
T ss_pred -------hHH-HHHHCCCE--EEcCCEEEEEECCC----CEEEECCC-------CE-EECCEEEECCC--CCCCCCCccC
Confidence 000 12334544 48888899987643 66777653 46 89999999999 77888888 8
Q ss_pred CccccccCCCCCccEEecccCC-----CCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeeeh
Q 022090 158 GLCSFCSSATGTGEVIHSTQYK-----NGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSR 225 (303)
Q Consensus 158 g~~~~~~~~~~~g~~~~~~~~~-----~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp~ 225 (303)
|.+. .+++..... ......+++++|||+|.+|+|+|..|.+.|.+||++++.+ +++|+
T Consensus 121 G~~~---------~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~ 183 (408)
T 2gqw_A 121 GATM---------PVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLELAATARTAGVHVSLVETQP-RLMSR 183 (408)
T ss_dssp TCSS---------CEEECCSHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSSTT
T ss_pred CCCC---------cEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCC-ccccc
Confidence 8641 123222111 1112347999999999999999999999999999999998 67764
No 55
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.83 E-value=6.3e-23 Score=188.48 Aligned_cols=200 Identities=15% Similarity=0.163 Sum_probs=124.9
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccC-cCCCCceEEecCc----ccccCCCCCCCCCCCCCCCHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWK-KYSYDRLRLHLAK----QFCQLPHLPFPSSYPMFVSRA 81 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 81 (303)
.+||+|||||++|+++|..|++.|.+|+|||++. +||+|. ..+.|+..+.... ....++.+.++.. ....+..
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~-~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~-~~~~~~~ 85 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA-YGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVD-RISVNGK 85 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC-SSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECS-EEEECHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC-CCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCC-CCccCHH
Confidence 4799999999999999999999999999999976 777553 2323221111000 0001111111100 1123455
Q ss_pred HHHHHHHHHHHHcCCC----------ceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCC
Q 022090 82 QFIEHLDHYVSHFNIG----------PSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNP 151 (303)
Q Consensus 82 ~l~~~l~~~~~~~~l~----------~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p 151 (303)
++.+++.++.+.+... .. .+.....-. +.++|.+.++ .+ +.||+||+||| +.|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~g~a~~~------~~~~v~~~~~-------~~-~~~d~lViATG--s~p 148 (492)
T 3ic9_A 86 AVMKRIQTERDRFVGFVVESVESFDEQD-KIRGFAKFL------DEHTLQVDDH-------SQ-VIAKRIVIATG--SRP 148 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCGGG-EEESCEEEE------ETTEEEETTT-------EE-EEEEEEEECCC--EEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCee-EEEEEEEEe------cCCEEEEcCC-------cE-EEeCEEEEccC--CCC
Confidence 6666665544433110 00 111111111 1245666443 57 89999999999 778
Q ss_pred CCCCCCCccccccCCCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeeehhhHHHH
Q 022090 152 FTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREMVYLG 231 (303)
Q Consensus 152 ~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp~~~~~~~ 231 (303)
..|++++.. ...++++.+... ....+++++|||+|.+|+|+|..|++.|.+||+++|.+ .++|..+.++.
T Consensus 149 ~~p~~~~~~--------~~~v~t~~~~~~-~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~~~~ 218 (492)
T 3ic9_A 149 NYPEFLAAA--------GSRLLTNDNLFE-LNDLPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSG-SVANLQDEEMK 218 (492)
T ss_dssp CCCHHHHTT--------GGGEECHHHHTT-CSSCCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTT-CCTTCCCHHHH
T ss_pred cCCCCCCcc--------CCcEEcHHHHhh-hhhcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECC-cccccCCHHHH
Confidence 877765422 123455555444 34458999999999999999999999999999999999 67776655555
Q ss_pred HHHH
Q 022090 232 VVLF 235 (303)
Q Consensus 232 ~~~~ 235 (303)
..+.
T Consensus 219 ~~l~ 222 (492)
T 3ic9_A 219 RYAE 222 (492)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 56
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.83 E-value=6.8e-21 Score=173.45 Aligned_cols=198 Identities=16% Similarity=0.200 Sum_probs=126.4
Q ss_pred CcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcC-CCCceEEecCc----ccccCCCCCCCCCCCCCCCHHH
Q 022090 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLAK----QFCQLPHLPFPSSYPMFVSRAQ 82 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 82 (303)
+||+|||||++|+++|..|++.|.+|+|+|+++.+||.|.+. +.++..+.... .+.. ..+.++.. ....+...
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~-~~~g~~~~-~~~~~~~~ 79 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKK-GLLGAKVK-GVELDLPA 79 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHH-CCTTEEEC-CEEECHHH
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhh-hcCCcccC-CCccCHHH
Confidence 699999999999999999999999999999998899987532 11111000000 0000 00000000 00112333
Q ss_pred HHHH-----------HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCC
Q 022090 83 FIEH-----------LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNP 151 (303)
Q Consensus 83 l~~~-----------l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p 151 (303)
+..+ +...++..+++. +.++.+ .+ + ...+.|.. ++ .+ +.||+||+||| +.|
T Consensus 80 ~~~~~~~~~~~l~~~~~~~~~~~~v~~--~~g~~~-~i--~--~~~~~v~~-~g-------~~-~~~d~lviAtG--~~p 141 (455)
T 2yqu_A 80 LMAHKDKVVQANTQGVEFLFKKNGIAR--HQGTAR-FL--S--ERKVLVEE-TG-------EE-LEARYILIATG--SAP 141 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCEE--EESCEE-ES--S--SSEEEETT-TC-------CE-EEEEEEEECCC--EEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEE--EEeEEE-Ee--c--CCeEEEee-CC-------EE-EEecEEEECCC--CCC
Confidence 3332 234445556554 555533 22 1 23444433 22 46 89999999999 778
Q ss_pred CCCCCCCccccccCCCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeeehhhHHHH
Q 022090 152 FTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREMVYLG 231 (303)
Q Consensus 152 ~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp~~~~~~~ 231 (303)
..|+++|.+. ..++++.+... ....+++++|||+|.+|+|+|..|++.|.+||++++.+ +++|..+..+.
T Consensus 142 ~~~~~~g~~~--------~~v~~~~~~~~-~~~~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~-~~l~~~~~~~~ 211 (455)
T 2yqu_A 142 LIPPWAQVDY--------ERVVTSTEALS-FPEVPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMD-RILPTMDLEVS 211 (455)
T ss_dssp CCCTTBCCCS--------SSEECHHHHTC-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSCTTSCHHHH
T ss_pred CCCCCCCCCc--------CcEechHHhhc-cccCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCC-ccccccCHHHH
Confidence 8888877543 13566655544 22357999999999999999999999999999999998 77776655554
Q ss_pred HHHH
Q 022090 232 VVLF 235 (303)
Q Consensus 232 ~~~~ 235 (303)
..+.
T Consensus 212 ~~l~ 215 (455)
T 2yqu_A 212 RAAE 215 (455)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 57
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.83 E-value=1.9e-21 Score=175.12 Aligned_cols=175 Identities=23% Similarity=0.296 Sum_probs=119.5
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCC--eEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHH
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIP--YVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQF 83 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~--v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 83 (303)
.++||+|||||++|+++|..|+++|++ |+++|+++..+ |.... .+..+ . .......++
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~-------y~~~~--l~~~~-----~------~~~~~~~~~ 67 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIP-------YERPP--LSKEY-----L------AREKTFERI 67 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCC-------BCSGG--GGTTT-----T------TTSSCSGGG
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCC-------cCccc--CCHHH-----H------cCCCCHHHh
Confidence 457999999999999999999999987 99999988643 11100 00000 0 000011122
Q ss_pred HHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCCccccc
Q 022090 84 IEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFC 163 (303)
Q Consensus 84 ~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~~~ 163 (303)
..+...+.+..+++. +.+++|+.++... +.|.+.++ .. +.||+||+||| +.|+.|++||.+.
T Consensus 68 ~~~~~~~~~~~~i~~--~~~~~v~~id~~~----~~v~~~~g-------~~-~~~d~lvlAtG--~~~~~~~i~g~~~-- 129 (415)
T 3lxd_A 68 CIRPAQFWEDKAVEM--KLGAEVVSLDPAA----HTVKLGDG-------SA-IEYGKLIWATG--GDPRRLSCVGADL-- 129 (415)
T ss_dssp BSSCHHHHHHTTEEE--EETCCEEEEETTT----TEEEETTS-------CE-EEEEEEEECCC--EECCCCBTTSSCC--
T ss_pred ccCCHHHHHHCCcEE--EeCCEEEEEECCC----CEEEECCC-------CE-EEeeEEEEccC--CccCCCCCCCccc--
Confidence 222334445566554 8888999997654 56777654 56 89999999999 7888888888653
Q ss_pred cCCCCCccEEecccCCC-----CCCCC-CCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeeeh
Q 022090 164 SSATGTGEVIHSTQYKN-----GKPYG-GKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSR 225 (303)
Q Consensus 164 ~~~~~~g~~~~~~~~~~-----~~~~~-~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp~ 225 (303)
.+ +++.....+ ..... +++++|||+|.+|+|+|..+.+.|.+||++++.+ .++++
T Consensus 130 -----~~-v~~~~~~~d~~~l~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~-~~l~~ 190 (415)
T 3lxd_A 130 -----AG-VHAVRTKEDADRLMAELDAGAKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALP-RVLAR 190 (415)
T ss_dssp -----BT-EECCCSHHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-STTTT
T ss_pred -----cC-EEEEcCHHHHHHHHHHhhhcCCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCC-chhhh
Confidence 12 222111111 01112 7899999999999999999999999999999998 56554
No 58
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.83 E-value=3.4e-20 Score=169.07 Aligned_cols=192 Identities=18% Similarity=0.246 Sum_probs=121.3
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcC-CCCceEEecCcc----cccCCCCCCCCCCCCCCCHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLAKQ----FCQLPHLPFPSSYPMFVSRA 81 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 81 (303)
++||+|||||++|+++|..|++.|.+|+|||++ .+||.|.+. +.+...+..... ......+.++.. ....+..
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~-~~~~~~~ 81 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK-ALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQAS-GGTLDWP 81 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC----CCHH
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC-CCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccC-CCCcCHH
Confidence 589999999999999999999999999999998 678877531 112110000000 000011111100 0123344
Q ss_pred HHHHHHHHH-----------HHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCC
Q 022090 82 QFIEHLDHY-----------VSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN 150 (303)
Q Consensus 82 ~l~~~l~~~-----------~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~ 150 (303)
.+.++.+.+ .+..+++. +.++ +..++ . ++|.+ ++ .+ +.||+||+||| +.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~--~~g~-~~~i~--~----~~v~~-~g-------~~-~~~d~lviAtG--s~ 141 (463)
T 2r9z_A 82 RLVAGRDRYIGAINSFWDGYVERLGITR--VDGH-ARFVD--A----HTIEV-EG-------QR-LSADHIVIATG--GR 141 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEE--EESC-EEEEE--T----TEEEE-TT-------EE-EEEEEEEECCC--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEE--EEeE-EEEcc--C----CEEEE-CC-------EE-EEcCEEEECCC--CC
Confidence 444444332 23445443 4443 33332 2 34555 32 56 89999999999 78
Q ss_pred CCCCCCCCccccccCCCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeeehhhHHH
Q 022090 151 PFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREMVYL 230 (303)
Q Consensus 151 p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp~~~~~~ 230 (303)
|..|++||.+.. +++.++.. ....+++++|||+|.+|+|+|..|++.|.+||+++|++ .+++..+..+
T Consensus 142 p~~p~i~G~~~~----------~~~~~~~~-~~~~~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~-~~l~~~~~~~ 209 (463)
T 2r9z_A 142 PIVPRLPGAELG----------ITSDGFFA-LQQQPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALED-RLLFQFDPLL 209 (463)
T ss_dssp ECCCSCTTGGGS----------BCHHHHHH-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCHHH
T ss_pred CCCCCCCCccce----------ecHHHHhh-hhccCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC-ccccccCHHH
Confidence 888889887432 33333322 12247899999999999999999999999999999998 6666554444
Q ss_pred HH
Q 022090 231 GV 232 (303)
Q Consensus 231 ~~ 232 (303)
..
T Consensus 210 ~~ 211 (463)
T 2r9z_A 210 SA 211 (463)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 59
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=99.83 E-value=7e-22 Score=177.59 Aligned_cols=172 Identities=19% Similarity=0.250 Sum_probs=117.9
Q ss_pred CcEEEECCcHHHHHHHHHHhhCCCC--eEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHH
Q 022090 8 VEVIMVGAGTSGLATAACLSLQSIP--YVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~g~~--v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 85 (303)
++|+|||||++|+++|..|+++|++ |+++|+++..+ |....+ +..+.. ....+... .
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~-------y~~~~l--~~~~~~--g~~~~~~~--~-------- 61 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLP-------YDRPSL--SKAVLD--GSLERPPI--L-------- 61 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSS-------BCSGGG--GTHHHH--TSSSSCCB--S--------
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCC-------cCCccc--cHHHhC--CCCCHHHh--c--------
Confidence 4899999999999999999999987 99999988654 211000 000000 00000000 0
Q ss_pred HHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCCccccccC
Q 022090 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSS 165 (303)
Q Consensus 86 ~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~~~~~ 165 (303)
+..++.++.+++. +++++|+.++... +.|.+.++ .+ +.||+||+||| +.|+.|++||.+.
T Consensus 62 ~~~~~~~~~~i~~--~~~~~v~~id~~~----~~v~~~~g-------~~-~~~d~lvlAtG--~~p~~~~ipG~~~---- 121 (410)
T 3ef6_A 62 AEADWYGEARIDM--LTGPEVTALDVQT----RTISLDDG-------TT-LSADAIVIATG--SRARTMALPGSQL---- 121 (410)
T ss_dssp SCTTHHHHTTCEE--EESCCEEEEETTT----TEEEETTS-------CE-EECSEEEECCC--EEECCCCCTTTTS----
T ss_pred CCHHHHHHCCCEE--EeCCEEEEEECCC----CEEEECCC-------CE-EECCEEEEccC--CcccCCCCCCccc----
Confidence 0112234456555 8898999997654 56777654 56 89999999999 7788899998652
Q ss_pred CCCCccEEecccCCC-----CCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeeeh
Q 022090 166 ATGTGEVIHSTQYKN-----GKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSR 225 (303)
Q Consensus 166 ~~~~g~~~~~~~~~~-----~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp~ 225 (303)
. .+++.....+ .....+++++|||+|.+|+|+|..+.+.|.+||++++.+ .++++
T Consensus 122 ---~-~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~-~~l~~ 181 (410)
T 3ef6_A 122 ---P-GVVTLRTYGDVQVLRDSWTSATRLLIVGGGLIGCEVATTARKLGLSVTILEAGD-ELLVR 181 (410)
T ss_dssp ---T-TEECCCSHHHHHHHHHHCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSHH
T ss_pred ---c-ceEEeccHHHHHHHHHHhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-ccchh
Confidence 2 2333222111 112347999999999999999999999999999999998 66654
No 60
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.83 E-value=5.1e-20 Score=168.84 Aligned_cols=205 Identities=14% Similarity=0.082 Sum_probs=127.2
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcC-CCCceEEecCc----ccccCCCCCCCCCCCCCCCHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLAK----QFCQLPHLPFPSSYPMFVSRA 81 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 81 (303)
.+||+|||||++|+++|..|++.|.+|+|+|+++.+||.|... +.+...+.... .+..+..+..+.. ....+..
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~-~~~~~~~ 84 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYP-EPELDID 84 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCC-CCCCCHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccC-CCccCHH
Confidence 5799999999999999999999999999999988888876431 11111000000 0000000000000 1112333
Q ss_pred HHHHH-----------HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecC-------CCCceeEEEEeeCEEEE
Q 022090 82 QFIEH-----------LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLL-------SPGREIEEYYSGRFLVV 143 (303)
Q Consensus 82 ~l~~~-----------l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~-------~~~~~~~~~~~ad~vIl 143 (303)
.+..+ +...++..+++. +.++.+. .++ +.+.|...++. ++ +..+ +.||+||+
T Consensus 85 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~--~~g~~~~---~~~--~~v~v~~~~g~~~~~~~~~g--~~~~-i~ad~lVi 154 (482)
T 1ojt_A 85 MLRAYKDGVVSRLTGGLAGMAKSRKVDV--IQGDGQF---LDP--HHLEVSLTAGDAYEQAAPTG--EKKI-VAFKNCII 154 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEE--EEEEEEE---EET--TEEEEEEEEEEETTEEEEEE--EEEE-EEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEE--EeeEEEE---ccC--CEEEEEecCCcccccccccC--cceE-EEcCEEEE
Confidence 33332 334455566554 5555443 222 45666543320 00 2256 89999999
Q ss_pred ccCCCCCCCCCC-CCCccccccCCCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeee
Q 022090 144 ASGETTNPFTPD-IRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHV 222 (303)
Q Consensus 144 AtG~~~~p~~p~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~ 222 (303)
||| +.|..|+ ++ . ...++++.+... ....+++++|||+|.+|+|+|..|++.|.+||+++|++ ++
T Consensus 155 AtG--s~p~~~~~i~-~---------~~~v~~~~~~~~-~~~~~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~-~~ 220 (482)
T 1ojt_A 155 AAG--SRVTKLPFIP-E---------DPRIIDSSGALA-LKEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMD-GL 220 (482)
T ss_dssp CCC--EEECCCSSCC-C---------CTTEECHHHHTT-CCCCCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSS-SS
T ss_pred CCC--CCCCCCCCCC-c---------cCcEEcHHHHhc-ccccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECC-cc
Confidence 999 6676666 44 2 123456555544 22347999999999999999999999999999999999 78
Q ss_pred eehhhHHHHHHHHh
Q 022090 223 LSREMVYLGVVLFK 236 (303)
Q Consensus 223 lp~~~~~~~~~~~~ 236 (303)
+|..+.+++..+.+
T Consensus 221 l~~~~~~~~~~l~~ 234 (482)
T 1ojt_A 221 MQGADRDLVKVWQK 234 (482)
T ss_dssp STTSCHHHHHHHHH
T ss_pred ccccCHHHHHHHHH
Confidence 88766555544433
No 61
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.83 E-value=1.9e-20 Score=172.36 Aligned_cols=206 Identities=17% Similarity=0.164 Sum_probs=131.2
Q ss_pred CcEEEECCcHHHHHHHHHHhhC---CCCeEEEecCCCCCCccCcC-CCCceEEecCc----ccccCCCCCCCC-CCCCCC
Q 022090 8 VEVIMVGAGTSGLATAACLSLQ---SIPYVILERENCYASIWKKY-SYDRLRLHLAK----QFCQLPHLPFPS-SYPMFV 78 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~---g~~v~iie~~~~~gg~w~~~-~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~ 78 (303)
+||+|||||++|+++|..|++. |.+|+|||+++ +||.|... +.++..+.... .+..+..+.++. ......
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 81 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAKI 81 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC------CB
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCCcc
Confidence 7999999999999999999999 99999999998 88876532 11111000000 000111111110 000112
Q ss_pred CHHHHHH-----------HHHHHHHHcCCCceeEeCeEEEEEEEeC--CCCeEEEEEeecCCCCceeEEEEeeCEEEEcc
Q 022090 79 SRAQFIE-----------HLDHYVSHFNIGPSIRYQRSVESASYDE--ATNMWNVKASNLLSPGREIEEYYSGRFLVVAS 145 (303)
Q Consensus 79 ~~~~l~~-----------~l~~~~~~~~l~~~i~~~~~V~~i~~~~--~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAt 145 (303)
+...+.. ++...+++.+++. +.++ ++.++... ..+.+.|...++ +... +.||+||+||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~--~~g~-~~~i~~~~~~~~~~~~V~~~~g-----~~~~-~~~d~lviAT 152 (499)
T 1xdi_A 82 SLPQIHARVKTLAAAQSADITAQLLSMGVQV--IAGR-GELIDSTPGLARHRIKATAADG-----STSE-HEADVVLVAT 152 (499)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEE--EESE-EEECCSSSCCSSEEEEEECTTS-----CEEE-EEESEEEECC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEeE-EEEecCcccCCCCEEEEEeCCC-----cEEE-EEeCEEEEcC
Confidence 3333333 3455566667654 6664 55554310 013355554432 1136 8999999999
Q ss_pred CCCCCCCCCCCCCccccccCCCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeeeh
Q 022090 146 GETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSR 225 (303)
Q Consensus 146 G~~~~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp~ 225 (303)
| +.|..|+++|.+.. .++++.+... ....+++++|||+|.+|+|+|..+.+.|.+||++++.+ +++|.
T Consensus 153 G--s~p~~p~i~g~~~~--------~v~~~~~~~~-~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~l~~ 220 (499)
T 1xdi_A 153 G--ASPRILPSAQPDGE--------RILTWRQLYD-LDALPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQD-HVLPY 220 (499)
T ss_dssp C--EEECCCGGGCCCSS--------SEEEGGGGGG-CSSCCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSS-SSSCC
T ss_pred C--CCCCCCCCCCCCcC--------cEEehhHhhh-hhccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCC-ccccc
Confidence 9 78888888886542 2556655544 23357999999999999999999999999999999998 78777
Q ss_pred hhHHHHHHHH
Q 022090 226 EMVYLGVVLF 235 (303)
Q Consensus 226 ~~~~~~~~~~ 235 (303)
.+.++...+.
T Consensus 221 ~d~~~~~~l~ 230 (499)
T 1xdi_A 221 EDADAALVLE 230 (499)
T ss_dssp SSHHHHHHHH
T ss_pred cCHHHHHHHH
Confidence 6555554443
No 62
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.83 E-value=5.9e-21 Score=170.12 Aligned_cols=172 Identities=17% Similarity=0.237 Sum_probs=121.1
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCC--CCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQS--IPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g--~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 84 (303)
++||+|||||++|+++|..|++.| .+|+++|++. |..|....+. . .........++.
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~--g~~~~~~~l~-----------~--------~~~~~~~~~~~~ 62 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD--GRSYSKPMLS-----------T--------GFSKNKDADGLA 62 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC--CCEECGGGGG-----------G--------TTTTTCCHHHHE
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC--CCccCccccc-----------H--------HHhCCCCHHHhh
Confidence 579999999999999999999998 4689999876 2222211000 0 001112233443
Q ss_pred H-HHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCCccccc
Q 022090 85 E-HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFC 163 (303)
Q Consensus 85 ~-~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~~~ 163 (303)
. ++..+++.++++. +++++|+.++... ++|.+.+ .+ +.||+||+||| +.|..|++||.+.
T Consensus 63 ~~~~~~~~~~~~v~~--~~~~~v~~i~~~~----~~v~~~~--------~~-~~~d~lviAtG--~~p~~p~i~g~~~-- 123 (384)
T 2v3a_A 63 MAEPGAMAEQLNARI--LTHTRVTGIDPGH----QRIWIGE--------EE-VRYRDLVLAWG--AEPIRVPVEGDAQ-- 123 (384)
T ss_dssp EECHHHHHHHTTCEE--ECSCCCCEEEGGG----TEEEETT--------EE-EECSEEEECCC--EEECCCCCBSTTT--
T ss_pred ccCHHHHHHhCCcEE--EeCCEEEEEECCC----CEEEECC--------cE-EECCEEEEeCC--CCcCCCCCCCcCc--
Confidence 2 4556667777664 7788888887544 4566643 46 89999999999 7888888888642
Q ss_pred cCCCCCccEEecccCCCC-----CCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeeeh
Q 022090 164 SSATGTGEVIHSTQYKNG-----KPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSR 225 (303)
Q Consensus 164 ~~~~~~g~~~~~~~~~~~-----~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp~ 225 (303)
..++++.++.+. ....+++++|||+|.+|+|+|..|.+.|.+||++++.+ ++++.
T Consensus 124 ------~~v~~~~~~~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~~~~ 183 (384)
T 2v3a_A 124 ------DALYPINDLEDYARFRQAAAGKRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCE-QVMPG 183 (384)
T ss_dssp ------TCEEECSSHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSSTT
T ss_pred ------CCEEEECCHHHHHHHHHhhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCc-chhhc
Confidence 224554443221 11237999999999999999999999999999999998 66665
No 63
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=99.83 E-value=1.1e-21 Score=177.56 Aligned_cols=192 Identities=17% Similarity=0.172 Sum_probs=122.7
Q ss_pred CcEEEECCcHHHHHHHHHHhhCC--CCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHH
Q 022090 8 VEVIMVGAGTSGLATAACLSLQS--IPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~g--~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 85 (303)
++|+|||||++|+++|..|+++| .+|+|||+++..+.. ... .+.... ..............
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~-------~~~--l~~~~~---~~~~~~~~~~~~~~----- 63 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFA-------NCA--LPYVIG---EVVEDRRYALAYTP----- 63 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBC-------GGG--HHHHHT---TSSCCGGGTBCCCH-----
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCC-------cch--hHHHHc---CCccchhhhhhcCH-----
Confidence 37999999999999999999987 479999998764321 100 000000 00000000000111
Q ss_pred HHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCCccccccC
Q 022090 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSS 165 (303)
Q Consensus 86 ~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~~~~~ 165 (303)
..+.++.+++. +.+++|+.++... ....+.. ...+ +..+ +.||+||+||| +.|+.|+++|...+
T Consensus 64 --~~~~~~~~i~~--~~~~~V~~id~~~--~~~~~~~--~~~~--~~~~-~~yd~lVIATG--s~p~~p~i~g~~~~--- 127 (437)
T 4eqs_A 64 --EKFYDRKQITV--KTYHEVIAINDER--QTVSVLN--RKTN--EQFE-ESYDKLILSPG--ASANSLGFESDITF--- 127 (437)
T ss_dssp --HHHHHHHCCEE--EETEEEEEEETTT--TEEEEEE--TTTT--EEEE-EECSEEEECCC--EEECCCCCCCTTEE---
T ss_pred --HHHHHhcCCEE--EeCCeEEEEEccC--cEEEEEe--ccCC--ceEE-EEcCEEEECCC--CccccccccCceEE---
Confidence 23345567665 8899999997655 3333333 2222 3357 89999999999 78888888885544
Q ss_pred CCCCccEEecccCCCC--CCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeeehhhHHHHHHHHh
Q 022090 166 ATGTGEVIHSTQYKNG--KPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREMVYLGVVLFK 236 (303)
Q Consensus 166 ~~~~g~~~~~~~~~~~--~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp~~~~~~~~~~~~ 236 (303)
....+........ ....+++++|||+|.+|+|+|..++++|.+||+++|++ .++|..+.+.+..+.+
T Consensus 128 ---~~~~~~~~~~l~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~ll~~~d~~~~~~~~~ 196 (437)
T 4eqs_A 128 ---TLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSD-KINKLMDADMNQPILD 196 (437)
T ss_dssp ---CCSSHHHHHHHHHHHHHHTCCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSS-CCSTTSCGGGGHHHHH
T ss_pred ---eeccHHHHHHHHHhhhccCCcEEEEECCccchhhhHHHHHhcCCcceeeeeec-cccccccchhHHHHHH
Confidence 2111110000000 11247899999999999999999999999999999999 7888777666555544
No 64
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.83 E-value=5.3e-21 Score=173.58 Aligned_cols=168 Identities=17% Similarity=0.219 Sum_probs=119.9
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHH
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 85 (303)
..++|+|||||++|+++|..|++.|++|+|||+.+.+||.|.+. ++. +....++.+
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~g---------------ip~---------~~~~~~~~~ 176 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYG---------------IPG---------FKLEKSVVE 176 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHHT---------------SCT---------TTSCHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeeec---------------CCC---------ccCCHHHHH
Confidence 45799999999999999999999999999999999999987642 111 111245777
Q ss_pred HHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCCccccccC
Q 022090 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSS 165 (303)
Q Consensus 86 ~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~~~~~ 165 (303)
+..++++++++++ ++++.|. ..+.+.+ .. +.||+||+|||.. .|+.+.+||.+.
T Consensus 177 ~~~~~l~~~gv~~--~~~~~v~----------~~v~~~~--------~~-~~~d~vvlAtG~~-~~~~~~ipG~~~---- 230 (456)
T 2vdc_G 177 RRVKLLADAGVIY--HPNFEVG----------RDASLPE--------LR-RKHVAVLVATGVY-KARDIKAPGSGL---- 230 (456)
T ss_dssp HHHHHHHHTTCEE--ETTCCBT----------TTBCHHH--------HH-SSCSEEEECCCCC-EECCTTCSCCTT----
T ss_pred HHHHHHHHCCcEE--EeCCEec----------cEEEhhH--------hH-hhCCEEEEecCCC-CCCCCCCCCCcC----
Confidence 7778888888655 7776541 1122222 23 5799999999952 366778888652
Q ss_pred CCCCccEEecccC---------CC--------CCCCCCCeEEEECCCccHHHHHHHHhhccCc-eEEEeecCeeeeehhh
Q 022090 166 ATGTGEVIHSTQY---------KN--------GKPYGGKNVLVVGSGNSGMEIALDLANHAAK-TSLVVRSPVHVLSREM 227 (303)
Q Consensus 166 ~~~~g~~~~~~~~---------~~--------~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~-vt~~~r~~~~~lp~~~ 227 (303)
.| +++..++ .. .....+++|+|||+|++|+|+|..+.+.|.+ ||+++|++...+|...
T Consensus 231 ---~g-v~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~~p~~~ 306 (456)
T 2vdc_G 231 ---GN-IVAALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKNMPGSQ 306 (456)
T ss_dssp ---TT-EEEHHHHHHHHHHHHCTTTCSSCCTTCSCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCSTTCSSCH
T ss_pred ---CC-cEEHHHHHHHhhhhhcccccccccccccccCCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCccCCCCCH
Confidence 33 2332111 11 1225689999999999999999999999874 9999999844466543
No 65
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.82 E-value=4e-21 Score=175.43 Aligned_cols=201 Identities=16% Similarity=0.163 Sum_probs=128.1
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcC-CCCceEEecC----cccc-cCCCCCCCCCCCCCCCH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLA----KQFC-QLPHLPFPSSYPMFVSR 80 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~-~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~ 80 (303)
++||+|||||++|+++|..|++.|++|+|+|++ .+||.|... +.+...+... ..+. .+..+..+ . ....+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~-~-~~~~~~ 79 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGIS-G-EVTFDY 79 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEE-E-CCEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCC-C-CCccCH
Confidence 379999999999999999999999999999998 678776421 1111100000 0000 01111111 0 001122
Q ss_pred HH-----------HHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCC
Q 022090 81 AQ-----------FIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETT 149 (303)
Q Consensus 81 ~~-----------l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~ 149 (303)
.. +...+.+.+++.+++. +.++.+. + + .+.+.|...++ +..+ +.||+||+||| +
T Consensus 80 ~~~~~~~~~~~~~l~~~l~~~~~~~gv~~--~~g~~~~-i--d--~~~v~V~~~~G-----~~~~-~~~d~lViAtG--~ 144 (464)
T 2a8x_A 80 GIAYDRSRKVAEGRVAGVHFLMKKNKITE--IHGYGTF-A--D--ANTLLVDLNDG-----GTES-VTFDNAIIATG--S 144 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEE--ECEEEEE-S--S--SSEEEEEETTS-----CCEE-EEEEEEEECCC--E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEeEEEE-e--c--CCeEEEEeCCC-----ceEE-EEcCEEEECCC--C
Confidence 22 2333445556666554 6555432 2 2 34567766443 1146 89999999999 6
Q ss_pred CCCCCCCCCccccccCCCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeeehhhHH
Q 022090 150 NPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREMVY 229 (303)
Q Consensus 150 ~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp~~~~~ 229 (303)
.|..|+++|.+. .++++.+... ....+++++|||+|.+|+|+|..|.+.|.+||+++|.+ +++|..+.+
T Consensus 145 ~~~~~~~~g~~~---------~~~~~~~~~~-~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~ 213 (464)
T 2a8x_A 145 STRLVPGTSLSA---------NVVTYEEQIL-SRELPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLP-RALPNEDAD 213 (464)
T ss_dssp EECCCTTCCCBT---------TEECHHHHHT-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCHH
T ss_pred CCCCCCCCCCCc---------eEEecHHHhh-ccccCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCC-ccccccCHH
Confidence 777888877542 2455554433 22357999999999999999999999999999999998 788866555
Q ss_pred HHHHHHh
Q 022090 230 LGVVLFK 236 (303)
Q Consensus 230 ~~~~~~~ 236 (303)
++..+.+
T Consensus 214 ~~~~l~~ 220 (464)
T 2a8x_A 214 VSKEIEK 220 (464)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5544433
No 66
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.82 E-value=2.8e-21 Score=175.80 Aligned_cols=187 Identities=17% Similarity=0.179 Sum_probs=121.8
Q ss_pred CcEEEECCcHHHHHHHHHHhhC--CCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHH
Q 022090 8 VEVIMVGAGTSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~--g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 85 (303)
+||+|||||++|+++|..|++. |.+|+|+|+++..+.... .+ +..... ... ..+..++..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~-------~~--~~~~~g--~~~-------~~~~~~~~~ 62 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSC-------GI--ALYLGK--EIK-------NNDPRGLFY 62 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGG-------GH--HHHHTT--CBG-------GGCGGGGBS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccc-------cc--hhhhcC--Ccc-------cCCHHHhhh
Confidence 4899999999999999999998 999999999886542110 00 000000 000 000111111
Q ss_pred HHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCCccccccC
Q 022090 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSS 165 (303)
Q Consensus 86 ~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~~~~~ 165 (303)
++...+++++++. +++++|+.++.++ ..+.+.....+ +..+ +.||+||+||| +.|..|++||.+.
T Consensus 63 ~~~~~~~~~gv~~--~~~~~v~~i~~~~--~~v~v~~~~~g----~~~~-~~~d~lviAtG--s~p~~p~i~g~~~---- 127 (452)
T 2cdu_A 63 SSPEELSNLGANV--QMRHQVTNVDPET--KTIKVKDLITN----EEKT-EAYDKLIMTTG--SKPTVPPIPGIDS---- 127 (452)
T ss_dssp CCHHHHHHTTCEE--EESEEEEEEEGGG--TEEEEEETTTC----CEEE-EECSEEEECCC--EEECCCCCTTTTS----
T ss_pred cCHHHHHHcCCEE--EeCCEEEEEEcCC--CEEEEEecCCC----ceEE-EECCEEEEccC--CCcCCCCCCCCCC----
Confidence 2233445567654 7889999987655 34444331111 1257 89999999999 7888889998753
Q ss_pred CCCCccEEecccCCCC-----CCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeee-hhhHHHHH
Q 022090 166 ATGTGEVIHSTQYKNG-----KPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLS-REMVYLGV 232 (303)
Q Consensus 166 ~~~~g~~~~~~~~~~~-----~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp-~~~~~~~~ 232 (303)
. .++++..+.+. ....+++++|||+|.+|+|+|..+.+.|.+||++++.+ +++| ..+.++..
T Consensus 128 ---~-~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~~~~~ 195 (452)
T 2cdu_A 128 ---S-RVYLCKNYNDAKKLFEEAPKAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHE-RVLYKYFDKEFTD 195 (452)
T ss_dssp ---T-TEEECSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS-STTTTTSCHHHHH
T ss_pred ---C-CEEEeCcHHHHHHHHHHhccCCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCC-chhhhhhhhhHHH
Confidence 2 24444332211 12257899999999999999999999999999999998 6766 33334433
No 67
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.82 E-value=2.8e-20 Score=169.12 Aligned_cols=194 Identities=19% Similarity=0.186 Sum_probs=121.0
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCc-CCCCceEEecCccc----c-cCCCCCCCCCCCCCCCH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHLAKQF----C-QLPHLPFPSSYPMFVSR 80 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~-~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~ 80 (303)
++||+|||||++|+++|..|++.|.+|+|||++ .+||.|.+ .+.|...+...... . ....+.++.. ....+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~-~~~~~~ 81 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCALIEAK-ELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTT-INKFNW 81 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEE-EEEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC-CCCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCC-CCccCH
Confidence 579999999999999999999999999999998 67887753 11111100000000 0 0000000000 001223
Q ss_pred HHHHHHHHH-----------HHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCC
Q 022090 81 AQFIEHLDH-----------YVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETT 149 (303)
Q Consensus 81 ~~l~~~l~~-----------~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~ 149 (303)
..+.++... ..+..+++. +.++ ++.++ . +.|.+ ++ .+ +.||+||+||| +
T Consensus 82 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~--~~g~-~~~i~--~----~~v~~-~g-------~~-~~~d~lviAtG--s 141 (450)
T 1ges_A 82 ETLIASRTAYIDRIHTSYENVLGKNNVDV--IKGF-ARFVD--A----KTLEV-NG-------ET-ITADHILIATG--G 141 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEE--EESC-CEEEE--T----TEEEE-TT-------EE-EEEEEEEECCC--E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEeE-EEEec--C----CEEEE-CC-------EE-EEeCEEEECCC--C
Confidence 344433332 234445543 4443 33332 2 34555 32 56 89999999999 7
Q ss_pred CCCCCCCCCccccccCCCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeeehhhHH
Q 022090 150 NPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREMVY 229 (303)
Q Consensus 150 ~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp~~~~~ 229 (303)
.|..|++||.+.. +++.++.. ....+++++|||+|.+|+|+|..|++.|.+||++++.+ .++|..+..
T Consensus 142 ~p~~p~i~g~~~~----------~~~~~~~~-~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~ 209 (450)
T 1ges_A 142 RPSHPDIPGVEYG----------IDSDGFFA-LPALPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFD-APLPSFDPM 209 (450)
T ss_dssp EECCCCSTTGGGS----------BCHHHHHH-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCHH
T ss_pred CCCCCCCCCccce----------ecHHHhhh-hhhcCCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCC-chhhhhhHH
Confidence 8888889987532 33333322 12247899999999999999999999999999999998 677665544
Q ss_pred HHHHH
Q 022090 230 LGVVL 234 (303)
Q Consensus 230 ~~~~~ 234 (303)
+...+
T Consensus 210 ~~~~l 214 (450)
T 1ges_A 210 ISETL 214 (450)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44433
No 68
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.82 E-value=1.7e-21 Score=179.75 Aligned_cols=208 Identities=15% Similarity=0.161 Sum_probs=126.0
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC--------CCCCcc-CcCCCCceEEecCccccc-----CCCCCCCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN--------CYASIW-KKYSYDRLRLHLAKQFCQ-----LPHLPFPS 72 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~--------~~gg~w-~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 72 (303)
.|||+|||+|++|+.+|.+++++|.+|+|+|+.. .+||++ +..|.|+..+........ ...+.+..
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~~ 121 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWKF 121 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCccc
Confidence 3899999999999999999999999999999743 367643 334444322211111000 00000000
Q ss_pred CCCCCCCHHHHHHHHHHHHH-----------HcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEE
Q 022090 73 SYPMFVSRAQFIEHLDHYVS-----------HFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFL 141 (303)
Q Consensus 73 ~~~~~~~~~~l~~~l~~~~~-----------~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~v 141 (303)
. ....++..+.++.+..++ ..+++ .+.....-++ . ....|...+... ..++ ++++++
T Consensus 122 ~-~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~---~i~G~a~f~~--~--~~v~V~~~~~~~---~~~~-i~a~~i 189 (542)
T 4b1b_A 122 D-NLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVK---YINGLAKLKD--K--NTVSYYLKGDLS---KEET-VTGKYI 189 (542)
T ss_dssp E-EEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCE---EECEEEEEEE--T--TEEEEEEC--CC---CEEE-EEEEEE
T ss_pred C-cccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCE---EEeeeEEEcC--C--CcceEeecccCC---ceEE-EeeeeE
Confidence 0 011234455555544433 22333 1222222221 1 223343332211 2267 899999
Q ss_pred EEccCCCCCCCCCCCCCccccccCCCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCee
Q 022090 142 VVASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVH 221 (303)
Q Consensus 142 IlAtG~~~~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~ 221 (303)
|+||| ++|.+|+.++... ..++++.+..+ ....|++++|||+|++|+|+|..++++|.+||+++|+ .
T Consensus 190 iIATG--s~P~~P~~~~~~~--------~~~~ts~~~l~-l~~lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~--~ 256 (542)
T 4b1b_A 190 LIATG--CRPHIPDDVEGAK--------ELSITSDDIFS-LKKDPGKTLVVGASYVALECSGFLNSLGYDVTVAVRS--I 256 (542)
T ss_dssp EECCC--EEECCCSSSBTHH--------HHCBCHHHHTT-CSSCCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESS--C
T ss_pred EeccC--CCCCCCCcccCCC--------ccccCchhhhc-cccCCceEEEECCCHHHHHHHHHHHhcCCeEEEeccc--c
Confidence 99999 8898886543321 12345555544 4456899999999999999999999999999999874 5
Q ss_pred eeehhhHHHHHHHHhhCC
Q 022090 222 VLSREMVYLGVVLFKYVP 239 (303)
Q Consensus 222 ~lp~~~~~~~~~~~~~l~ 239 (303)
+||.++.+++..+.+.|.
T Consensus 257 ~L~~~D~ei~~~l~~~l~ 274 (542)
T 4b1b_A 257 VLRGFDQQCAVKVKLYME 274 (542)
T ss_dssp SSTTSCHHHHHHHHHHHH
T ss_pred cccccchhHHHHHHHHHH
Confidence 788888877766655443
No 69
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.82 E-value=6.8e-21 Score=173.07 Aligned_cols=177 Identities=17% Similarity=0.155 Sum_probs=117.9
Q ss_pred CcEEEECCcHHHHHHHHHHhhC--CCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHH
Q 022090 8 VEVIMVGAGTSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~--g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 85 (303)
+||+|||||++|+++|..|++. |.+|+|||+++..|.. ... .+.... .. +.+.+++..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~-------~~~--~~~~~~--~~---------~~~~~~~~~ 60 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFL-------SAG--MQLYLE--GK---------VKDVNSVRY 60 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBC-------GGG--HHHHHT--TS---------SCCGGGSBS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcc-------ccc--chhhhc--Cc---------cCCHHHhhc
Confidence 4899999999999999999998 8999999998865411 000 000000 00 001111112
Q ss_pred HHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCCccccccC
Q 022090 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSS 165 (303)
Q Consensus 86 ~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~~~~~ 165 (303)
++.+.+++++++. ++++.|+.++.++ .. |.+.+..++ +..+ +.||+||+||| +.|..|++||.+.
T Consensus 61 ~~~~~~~~~gv~~--~~~~~v~~i~~~~--~~--v~~~~~~~g--~~~~-~~~d~lviAtG--~~p~~p~i~G~~~---- 125 (447)
T 1nhp_A 61 MTGEKMESRGVNV--FSNTEITAIQPKE--HQ--VTVKDLVSG--EERV-ENYDKLIISPG--AVPFELDIPGKDL---- 125 (447)
T ss_dssp CCHHHHHHTTCEE--EETEEEEEEETTT--TE--EEEEETTTC--CEEE-EECSEEEECCC--EEECCCCSTTTTS----
T ss_pred CCHHHHHHCCCEE--EECCEEEEEeCCC--CE--EEEEecCCC--ceEE-EeCCEEEEcCC--CCcCCCCCCCCCC----
Confidence 2233445567654 7899999887654 33 444331111 2246 79999999999 7788899998752
Q ss_pred CCCCccEEecccCCCC-------CCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeee
Q 022090 166 ATGTGEVIHSTQYKNG-------KPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLS 224 (303)
Q Consensus 166 ~~~~g~~~~~~~~~~~-------~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp 224 (303)
.+ ++++..+.+. ....+++++|||+|.+|+|+|..+++.|.+|+++++.+ .+++
T Consensus 126 ---~~-v~~~~~~~~~~~l~~~~~~~~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~ 186 (447)
T 1nhp_A 126 ---DN-IYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILD-RPLG 186 (447)
T ss_dssp ---BS-EECCCHHHHHHHHHHHHTCTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-STTT
T ss_pred ---CC-eEEECCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCc-cccc
Confidence 22 4544332211 11157999999999999999999999999999999998 5655
No 70
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.82 E-value=4.1e-20 Score=169.35 Aligned_cols=208 Identities=13% Similarity=0.118 Sum_probs=126.8
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcC-CCCceEEecCc----ccc-cCCCCCCCCCCCCCCCH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLAK----QFC-QLPHLPFPSSYPMFVSR 80 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~-~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~ 80 (303)
.+||+|||||++|+++|..|++.|++|+|+|+++.+||.|... +.++..+.... .+. .+.....+.......+.
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~~~~~ 84 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIKINV 84 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCEEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 4799999999999999999999999999999988899987532 11110000000 000 00000000000001123
Q ss_pred HHHHHH-----------HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCC-ceeEEEEeeCEEEEccCCC
Q 022090 81 AQFIEH-----------LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPG-REIEEYYSGRFLVVASGET 148 (303)
Q Consensus 81 ~~l~~~-----------l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~-~~~~~~~~ad~vIlAtG~~ 148 (303)
.++..+ +...+++.+++. ++++.+.. +...+.|.+.++.... ..... +.||+||+|||
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~--~~g~~~~~-----~~~~v~V~~~~G~~~~~~~~~~-i~~d~lViAtG-- 154 (478)
T 1v59_A 85 ANFQKAKDDAVKQLTGGIELLFKKNKVTY--YKGNGSFE-----DETKIRVTPVDGLEGTVKEDHI-LDVKNIIVATG-- 154 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEE--EESEEEES-----SSSEEEEECCTTCTTCCSSCEE-EEEEEEEECCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEEEEEEc-----cCCeEEEEecCCCcccccccce-EEeCEEEECcC--
Confidence 333332 334455556554 67765531 2345667654431000 00024 68999999999
Q ss_pred CCCCCCCCCCccccccCCCCCc-cEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeeehhh
Q 022090 149 TNPFTPDIRGLCSFCSSATGTG-EVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREM 227 (303)
Q Consensus 149 ~~p~~p~~~g~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp~~~ 227 (303)
+.|. .+||.+ + .+ .++++.+..... ..+++++|||+|.+|+|+|..|++.|.+||+++|++ .++|..+
T Consensus 155 s~p~--~~~g~~-~------~~~~v~~~~~~~~~~-~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~ 223 (478)
T 1v59_A 155 SEVT--PFPGIE-I------DEEKIVSSTGALSLK-EIPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQP-QIGASMD 223 (478)
T ss_dssp EEEC--CCTTCC-C------CSSSEECHHHHTTCS-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSSSSC
T ss_pred CCCC--CCCCCC-C------CCceEEcHHHHHhhh-ccCceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCC-ccccccC
Confidence 5552 455654 2 33 356665554422 247999999999999999999999999999999998 7777655
Q ss_pred HHHHHHHH
Q 022090 228 VYLGVVLF 235 (303)
Q Consensus 228 ~~~~~~~~ 235 (303)
.++...+.
T Consensus 224 ~~~~~~l~ 231 (478)
T 1v59_A 224 GEVAKATQ 231 (478)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55544443
No 71
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.82 E-value=2e-20 Score=170.75 Aligned_cols=195 Identities=17% Similarity=0.153 Sum_probs=122.4
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCc-CCCCceEEec----CcccccCCCCCCCCCCCCCCCHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHL----AKQFCQLPHLPFPSSYPMFVSRA 81 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 81 (303)
.+||+|||||++|+++|..|+++|++|+|||+ ..+||.|.+ .+.+...+.. ......++.+.++... ...+..
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~-~~~~~~ 82 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGE-SRFDWA 82 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECC-CEECHH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCC-CCcCHH
Confidence 58999999999999999999999999999999 668887643 2111110000 0000001111110000 011222
Q ss_pred HHH-----------HHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEe-ecCCCCceeEEEEeeCEEEEccCCCC
Q 022090 82 QFI-----------EHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKAS-NLLSPGREIEEYYSGRFLVVASGETT 149 (303)
Q Consensus 82 ~l~-----------~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~-~~~~~~~~~~~~~~ad~vIlAtG~~~ 149 (303)
.+. .++....+..+++. ..+ ++..+ +.+.+.+. ++ .. +.||+||+||| +
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~--~~g-~~~~i------~~~~v~~~~~~-------~~-~~~d~lviAtG--~ 143 (463)
T 4dna_A 83 KLVAAKEQEIARLEGLYRKGLANAGAEI--LDT-RAELA------GPNTVKLLASG-------KT-VTAERIVIAVG--G 143 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCEE--EES-CEEES------SSSEEEETTTT-------EE-EEEEEEEECCC--E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEE-EEEEe------eCCEEEEecCC-------eE-EEeCEEEEecC--C
Confidence 222 23333444455543 333 33332 12345552 22 57 89999999999 7
Q ss_pred CCC-CCCCCCccccccCCCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeeehhhH
Q 022090 150 NPF-TPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREMV 228 (303)
Q Consensus 150 ~p~-~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp~~~~ 228 (303)
.|. .|++||.+.. +++.++.. ....+++++|||+|.+|+|+|..+.+.|.+|+++++.+ .++|..+.
T Consensus 144 ~p~~~p~i~G~~~~----------~~~~~~~~-~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~-~~l~~~~~ 211 (463)
T 4dna_A 144 HPSPHDALPGHELC----------ITSNEAFD-LPALPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGK-EILSRFDQ 211 (463)
T ss_dssp EECCCTTSTTGGGC----------BCHHHHTT-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCH
T ss_pred CcccCCCCCCcccc----------ccHHHHhh-hhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCC-ccccccCH
Confidence 888 8899987643 33333333 23357999999999999999999999999999999998 66676555
Q ss_pred HHHHHH
Q 022090 229 YLGVVL 234 (303)
Q Consensus 229 ~~~~~~ 234 (303)
++...+
T Consensus 212 ~~~~~l 217 (463)
T 4dna_A 212 DMRRGL 217 (463)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 544433
No 72
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.81 E-value=6.7e-21 Score=174.49 Aligned_cols=203 Identities=14% Similarity=0.113 Sum_probs=123.6
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCC------CCCccCc-CCCCceEEecCc-ccc----cCCCCCCCCC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENC------YASIWKK-YSYDRLRLHLAK-QFC----QLPHLPFPSS 73 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~------~gg~w~~-~~~~~~~~~~~~-~~~----~~~~~~~~~~ 73 (303)
.++||+|||||++|+++|..|++.|++|+|||+++. +||+|.+ .+.+...+.... .+. .+..+.++..
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~ 81 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTG 81 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccC
Confidence 358999999999999999999999999999999874 4554432 111111000000 000 0011110000
Q ss_pred CCCCCCHHHHHHHHH-----------HHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEE
Q 022090 74 YPMFVSRAQFIEHLD-----------HYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLV 142 (303)
Q Consensus 74 ~~~~~~~~~l~~~l~-----------~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vI 142 (303)
....+...+..+.. ...+..+++. ..+. +..+ + ...+.|...++ +... +.||+||
T Consensus 82 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~g~-~~~~--~--~~~~~v~~~~g-----~~~~-~~~d~lv 147 (476)
T 3lad_A 82 -EVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTL--FEGH-GKLL--A--GKKVEVTAADG-----SSQV-LDTENVI 147 (476)
T ss_dssp -CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEE--EESE-EEEC--S--TTCEEEECTTS-----CEEE-ECCSCEE
T ss_pred -CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEeE-EEEe--c--CCEEEEEcCCC-----ceEE-EEcCEEE
Confidence 11123333333332 2333445543 4333 2222 2 24566655433 2257 8999999
Q ss_pred EccCCCCCCCCCCCCCccccccCCCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeee
Q 022090 143 VASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHV 222 (303)
Q Consensus 143 lAtG~~~~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~ 222 (303)
+||| +.|..|+.++.+ ...++++.+... ....+++++|||+|.+|+|+|..|.+.|.+||+++|.+ ++
T Consensus 148 lAtG--~~p~~~~~~~~~--------~~~v~~~~~~~~-~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~ 215 (476)
T 3lad_A 148 LASG--SKPVEIPPAPVD--------QDVIVDSTGALD-FQNVPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMD-KF 215 (476)
T ss_dssp ECCC--EEECCCTTSCCC--------SSSEEEHHHHTS-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SS
T ss_pred EcCC--CCCCCCCCCCCC--------cccEEechhhhc-cccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCC-Cc
Confidence 9999 677666554432 223566655544 33467999999999999999999999999999999998 77
Q ss_pred eehhhHHHHHHH
Q 022090 223 LSREMVYLGVVL 234 (303)
Q Consensus 223 lp~~~~~~~~~~ 234 (303)
+|..+.++...+
T Consensus 216 l~~~~~~~~~~l 227 (476)
T 3lad_A 216 LPAVDEQVAKEA 227 (476)
T ss_dssp STTSCHHHHHHH
T ss_pred CcccCHHHHHHH
Confidence 776655554443
No 73
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.81 E-value=6.4e-20 Score=172.46 Aligned_cols=199 Identities=18% Similarity=0.226 Sum_probs=123.4
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecC-C-------CCCCccCc-CCCCceEEecCc-------ccccCCCCC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERE-N-------CYASIWKK-YSYDRLRLHLAK-------QFCQLPHLP 69 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~-~-------~~gg~w~~-~~~~~~~~~~~~-------~~~~~~~~~ 69 (303)
..+||+|||||++|+++|..|++.|.+|+|||+. + .+||+|.+ .++|...+.... ....+. ..
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g-~~ 184 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFG-WS 184 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT-CC
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCC-cc
Confidence 4589999999999999999999999999999973 2 36665532 222221111000 000010 00
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHc-----------CCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEee
Q 022090 70 FPSSYPMFVSRAQFIEHLDHYVSHF-----------NIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSG 138 (303)
Q Consensus 70 ~~~~~~~~~~~~~l~~~l~~~~~~~-----------~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~a 138 (303)
.+.. ....+..++.+++..+++.+ ++. ........++ . +.+.....++ +..+ +.|
T Consensus 185 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~---~~~~~~~~~~--~----~~v~v~~~~g---~~~~-~~~ 250 (598)
T 2x8g_A 185 LDRS-KISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVT---YLNAKGRLIS--P----HEVQITDKNQ---KVST-ITG 250 (598)
T ss_dssp CCGG-GCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE---EECSEEEEEE--T----TEEEEECTTC---CEEE-EEE
T ss_pred ccCC-cCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcE---EEEEEEEEcC--C----CEEEEEeCCC---CeEE-EEe
Confidence 1100 01245667777776655432 222 1222232332 2 3344432111 2246 899
Q ss_pred CEEEEccCCCCCCCCCCCCCccccccCCCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeec
Q 022090 139 RFLVVASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRS 218 (303)
Q Consensus 139 d~vIlAtG~~~~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~ 218 (303)
|+||+||| +.|+.|++||.+.+ .+++.++.. ....+++++|||+|++|+|+|..|++.|.+||+++|+
T Consensus 251 d~lviAtG--s~p~~p~i~G~~~~---------~~~~~~~~~-~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 251 NKIILATG--ERPKYPEIPGAVEY---------GITSDDLFS-LPYFPGKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp EEEEECCC--EEECCCSSTTHHHH---------CEEHHHHTT-CSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEeCC--CCCCCCCCCCcccc---------eEcHHHHhh-CccCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 99999999 78889999997644 244444433 2345789999999999999999999999999999987
Q ss_pred CeeeeehhhHHHHHH
Q 022090 219 PVHVLSREMVYLGVV 233 (303)
Q Consensus 219 ~~~~lp~~~~~~~~~ 233 (303)
.++|..+..++..
T Consensus 319 --~~l~~~d~~~~~~ 331 (598)
T 2x8g_A 319 --ILLRGFDQQMAEK 331 (598)
T ss_dssp --CSSTTSCHHHHHH
T ss_pred --cCcCcCCHHHHHH
Confidence 4666655444433
No 74
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.81 E-value=4.5e-20 Score=169.38 Aligned_cols=202 Identities=14% Similarity=0.125 Sum_probs=124.0
Q ss_pred CCcEEEECCcHHHHHHHHHHhh-CCCCeEEEe--------cCCCCCCccCc-CCCCceEEecCccc----ccCCCCCCCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSL-QSIPYVILE--------RENCYASIWKK-YSYDRLRLHLAKQF----CQLPHLPFPS 72 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~-~g~~v~iie--------~~~~~gg~w~~-~~~~~~~~~~~~~~----~~~~~~~~~~ 72 (303)
++||+|||||++|+++|..|++ .|.+|+||| +...+||+|.+ .+.|+..+.....+ .....+.+..
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~ 82 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWEL 82 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEC
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCccc
Confidence 5799999999999999999999 999999999 35678887643 22222111000000 0000011100
Q ss_pred CCC-CCCCHHHHHHHHHH-----------HHHHc-CCCceeEeCeEEEEEEEeCCCCeEEEEE---eecCCCCce-eEEE
Q 022090 73 SYP-MFVSRAQFIEHLDH-----------YVSHF-NIGPSIRYQRSVESASYDEATNMWNVKA---SNLLSPGRE-IEEY 135 (303)
Q Consensus 73 ~~~-~~~~~~~l~~~l~~-----------~~~~~-~l~~~i~~~~~V~~i~~~~~~~~~~v~~---~~~~~~~~~-~~~~ 135 (303)
..+ ...+...+.++..+ ..+.. +++. +.++ ++.++ . ..+.+.. .++ + ...
T Consensus 83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~--~~g~-~~~i~--~--~~v~v~~~~~~~g-----~~~~~- 149 (490)
T 1fec_A 83 DRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTF--HQGF-GALQD--N--HTVLVRESADPNS-----AVLET- 149 (490)
T ss_dssp CGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEE--EESE-EEEEE--T--TEEEEESSSSTTS-----CEEEE-
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEE--EEeE-EEEee--C--CEEEEEeeccCCC-----CceEE-
Confidence 000 01233444443333 23334 4433 5554 55543 2 2233321 121 1 146
Q ss_pred EeeCEEEEccCCCCCCCCCCCCCccccccCCCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhc---cCce
Q 022090 136 YSGRFLVVASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANH---AAKT 212 (303)
Q Consensus 136 ~~ad~vIlAtG~~~~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~---g~~v 212 (303)
+.||+||+||| +.|..|++||.+.. +++.++.. ....+++++|||+|.+|+|+|..|.+. |.+|
T Consensus 150 ~~~d~lviAtG--s~p~~p~i~g~~~~----------~~~~~~~~-~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~V 216 (490)
T 1fec_A 150 LDTEYILLATG--SWPQHLGIEGDDLC----------ITSNEAFY-LDEAPKRALCVGGGYISIEFAGIFNAYKARGGQV 216 (490)
T ss_dssp EEEEEEEECCC--EEECCCCSBTGGGC----------BCHHHHTT-CSSCCSEEEEECSSHHHHHHHHHHHHHSCTTCEE
T ss_pred EEcCEEEEeCC--CCCCCCCCCCccce----------ecHHHHhh-hhhcCCeEEEECCCHHHHHHHHHHHhhccCcCeE
Confidence 89999999999 78888888887432 33333333 223478999999999999999999999 9999
Q ss_pred EEEeecCeeeeehhhHHHHHHHH
Q 022090 213 SLVVRSPVHVLSREMVYLGVVLF 235 (303)
Q Consensus 213 t~~~r~~~~~lp~~~~~~~~~~~ 235 (303)
|+++|.+ +++|..+.++...+.
T Consensus 217 tlv~~~~-~~l~~~d~~~~~~l~ 238 (490)
T 1fec_A 217 DLAYRGD-MILRGFDSELRKQLT 238 (490)
T ss_dssp EEEESSS-SSSTTSCHHHHHHHH
T ss_pred EEEEcCC-CcccccCHHHHHHHH
Confidence 9999998 777765555544433
No 75
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.81 E-value=9.7e-21 Score=173.50 Aligned_cols=183 Identities=17% Similarity=0.298 Sum_probs=120.3
Q ss_pred CCcEEEECCcHHHHHHHHHHhhC--CCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~--g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 84 (303)
++||+|||||++|+++|..|++. |.+|+|||+++..+.... .+ +... .. ...+..++.
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~-----~~----~~~~---~~--------~~~~~~~l~ 95 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQC-----GL----PYVI---SG--------AIASTEKLI 95 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGG-----GH----HHHH---TT--------SSSCGGGGB
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCC-----Cc----chhh---cC--------CcCCHHHhh
Confidence 46999999999999999999997 899999999886542110 00 0000 00 001111221
Q ss_pred HH-HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEE-eecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCCcccc
Q 022090 85 EH-LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKA-SNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSF 162 (303)
Q Consensus 85 ~~-l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~-~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~~ 162 (303)
.+ ...+.+.++++. +++++|+.++.++ +.+.+.. .++ +..+ +.||+||+||| +.|..|++||.+.
T Consensus 96 ~~~~~~~~~~~gv~~--~~~~~v~~i~~~~--~~v~v~~~~~g-----~~~~-~~~d~lviAtG--~~p~~p~i~G~~~- 162 (480)
T 3cgb_A 96 ARNVKTFRDKYGIDA--KVRHEVTKVDTEK--KIVYAEHTKTK-----DVFE-FSYDRLLIATG--VRPVMPEWEGRDL- 162 (480)
T ss_dssp SSCHHHHHHTTCCEE--ESSEEEEEEETTT--TEEEEEETTTC-----CEEE-EECSEEEECCC--EEECCCCCBTTTS-
T ss_pred hcCHHHHHhhcCCEE--EeCCEEEEEECCC--CEEEEEEcCCC-----ceEE-EEcCEEEECCC--CcccCCCCCCccC-
Confidence 11 223334557654 8889999987654 4444443 112 2237 89999999999 7888888988753
Q ss_pred ccCCCCCccEEecccCCCCC-------CCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeeehhhHHH
Q 022090 163 CSSATGTGEVIHSTQYKNGK-------PYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREMVYL 230 (303)
Q Consensus 163 ~~~~~~~g~~~~~~~~~~~~-------~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp~~~~~~ 230 (303)
.+ +++.....+.. ...+++++|||+|.+|+|+|..|.+.|.+|++++|.+ .++|..+.++
T Consensus 163 ------~~-v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~~ 229 (480)
T 3cgb_A 163 ------QG-VHLLKTIPDAERILKTLETNKVEDVTIIGGGAIGLEMAETFVELGKKVRMIERND-HIGTIYDGDM 229 (480)
T ss_dssp ------BT-EECCSSHHHHHHHHHHHHSSCCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGG-GTTSSSCHHH
T ss_pred ------CC-EEEeCCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCC-chhhcCCHHH
Confidence 22 34432221110 1157999999999999999999999999999999998 5666443333
No 76
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.81 E-value=1.1e-20 Score=169.45 Aligned_cols=172 Identities=19% Similarity=0.266 Sum_probs=115.5
Q ss_pred CcEEEECCcHHHHHHHHHHhhCCC--CeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHH
Q 022090 8 VEVIMVGAGTSGLATAACLSLQSI--PYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~g~--~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 85 (303)
++|+|||||++|+++|..|++.|+ +|+|||+++..+ |.... .+..+.... ..+. ++..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~-------y~~~~--l~~~~l~~~--~~~~---------~~~~ 61 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLP-------YQRPP--LSKAYLKSG--GDPN---------SLMF 61 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSS-------BCSGG--GGTGGGGSC--CCTT---------SSBS
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCC-------CCCcc--CCHHHHCCC--CCHH---------HccC
Confidence 689999999999999999999998 899999988643 21110 000010000 0000 1111
Q ss_pred HHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCCccccccC
Q 022090 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSS 165 (303)
Q Consensus 86 ~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~~~~~ 165 (303)
+...+....+++. +. ++|+.++... ..|.+.++ .. +.||+||+||| +.|..|++||.+.
T Consensus 62 ~~~~~~~~~~i~~--~~-~~v~~id~~~----~~v~~~~g-------~~-~~~d~lvlAtG--~~p~~~~i~g~~~---- 120 (404)
T 3fg2_P 62 RPEKFFQDQAIEL--IS-DRMVSIDREG----RKLLLASG-------TA-IEYGHLVLATG--ARNRMLDVPNASL---- 120 (404)
T ss_dssp SCHHHHHHTTEEE--EC-CCEEEEETTT----TEEEESSS-------CE-EECSEEEECCC--EEECCCCSTTTTS----
T ss_pred CCHHHHHhCCCEE--EE-EEEEEEECCC----CEEEECCC-------CE-EECCEEEEeeC--CCccCCCCCCCCC----
Confidence 1223344456554 66 8888887654 45666654 56 89999999999 7888888988653
Q ss_pred CCCCccEEecccCCC-----CCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeeeh
Q 022090 166 ATGTGEVIHSTQYKN-----GKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSR 225 (303)
Q Consensus 166 ~~~~g~~~~~~~~~~-----~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp~ 225 (303)
.+ +++.....+ .....+++++|||+|.+|+|+|..+.+.|.+||++++.+ .++++
T Consensus 121 ---~~-v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~-~~~~~ 180 (404)
T 3fg2_P 121 ---PD-VLYLRTLDESEVLRQRMPDKKHVVVIGAGFIGLEFAATARAKGLEVDVVELAP-RVMAR 180 (404)
T ss_dssp ---TT-EECCSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-STTTT
T ss_pred ---Cc-EEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCC-cchhh
Confidence 22 222111111 112247899999999999999999999999999999998 55554
No 77
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.80 E-value=2.1e-20 Score=168.94 Aligned_cols=175 Identities=17% Similarity=0.172 Sum_probs=117.3
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCC--CeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSI--PYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~--~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 84 (303)
.+||+|||||++|+++|..|++.|. +|+++|+++..+ |... ..+..+.. .. .....+.
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~-------~~~~--~l~~~~~~--~~---------~~~~~~~ 63 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIP-------HHLP--PLSKAYLA--GK---------ATAESLY 63 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCC-------BCSG--GGGTTTTT--TC---------SCSGGGB
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCC-------CcCC--CCcHHHhC--CC---------CChHHhc
Confidence 4799999999999999999999998 799999987543 1110 00000000 00 0001111
Q ss_pred HHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCCcccccc
Q 022090 85 EHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCS 164 (303)
Q Consensus 85 ~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~~~~ 164 (303)
....+++++.+++. ++++.|+.++... +.|.+.++ .+ +.||+||+||| +.|..|++||.+.
T Consensus 64 ~~~~~~~~~~gv~~--~~~~~v~~i~~~~----~~v~~~~g-------~~-~~~d~lviAtG--~~p~~~~i~G~~~--- 124 (431)
T 1q1r_A 64 LRTPDAYAAQNIQL--LGGTQVTAINRDR----QQVILSDG-------RA-LDYDRLVLATG--GRPRPLPVASGAV--- 124 (431)
T ss_dssp SSCHHHHHHTTEEE--ECSCCEEEEETTT----TEEEETTS-------CE-EECSEEEECCC--EEECCCGGGTTHH---
T ss_pred ccCHHHHHhCCCEE--EeCCEEEEEECCC----CEEEECCC-------CE-EECCEEEEcCC--CCccCCCCCCccc---
Confidence 11123344566554 8888999997654 45666553 46 89999999999 7788888888752
Q ss_pred CCCCCc-c-EEecccCCC-----CCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeeeh
Q 022090 165 SATGTG-E-VIHSTQYKN-----GKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSR 225 (303)
Q Consensus 165 ~~~~~g-~-~~~~~~~~~-----~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp~ 225 (303)
.+ . +++.....+ .....+++++|||+|.+|+|+|..|.+.|.+||++++.+ .++|+
T Consensus 125 ----~~~~~v~~~~~~~d~~~l~~~l~~~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~-~~l~~ 187 (431)
T 1q1r_A 125 ----GKANNFRYLRTLEDAECIRRQLIADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAA-RVLER 187 (431)
T ss_dssp ----HHSTTEEESSSHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-STTTT
T ss_pred ----CCCceEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCC-ccccc
Confidence 22 1 232211110 112347999999999999999999999999999999998 56654
No 78
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.80 E-value=5.1e-20 Score=168.92 Aligned_cols=194 Identities=16% Similarity=0.165 Sum_probs=120.2
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCc-CCCCceEEecC----cccccCCCCCCCCCCCCCCCHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHLA----KQFCQLPHLPFPSSYPMFVSRA 81 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 81 (303)
.+||+|||||++|+++|..|+++|.+|+|+|+ ..+||.|.+ .+.+...+... ..+..++.+.+....+ ..+..
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~-~~~~~ 103 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADP-IFNWE 103 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCC-EECHH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCC-ccCHH
Confidence 47999999999999999999999999999999 567886643 22221110000 0000011111110001 11222
Q ss_pred H-----------HHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEe-ecCCCCceeEEEEeeCEEEEccCCCC
Q 022090 82 Q-----------FIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKAS-NLLSPGREIEEYYSGRFLVVASGETT 149 (303)
Q Consensus 82 ~-----------l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~-~~~~~~~~~~~~~~ad~vIlAtG~~~ 149 (303)
. +..++....+..+++. ..+ .+..++ . +.+.+. ++ .. +.+|+||+||| +
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~g-~~~~i~--~----~~v~v~~~~-------~~-~~~d~lviAtG--~ 164 (484)
T 3o0h_A 104 KLVAAKNKEISRLEGLYREGLQNSNVHI--YES-RAVFVD--E----HTLELSVTG-------ER-ISAEKILIATG--A 164 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEE--EES-CEEEEE--T----TEEEETTTC-------CE-EEEEEEEECCC--E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEe-EEEEee--C----CEEEEecCC-------eE-EEeCEEEEccC--C
Confidence 2 2233334444555543 333 344442 2 345553 22 56 89999999999 7
Q ss_pred CCC-CCCCCCccccccCCCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeeeehhhH
Q 022090 150 NPF-TPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREMV 228 (303)
Q Consensus 150 ~p~-~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp~~~~ 228 (303)
.|. .|.+||.+.+ +++.++.. ....+++++|||+|.+|+|+|..+.+.|.+|+++++.+ .++|..+.
T Consensus 165 ~p~~~p~i~G~~~~----------~~~~~~~~-~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~-~~l~~~~~ 232 (484)
T 3o0h_A 165 KIVSNSAIKGSDLC----------LTSNEIFD-LEKLPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGD-LILRNFDY 232 (484)
T ss_dssp EECCC--CBTGGGS----------BCTTTGGG-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCH
T ss_pred CcccCCCCCCcccc----------ccHHHHHh-HHhcCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCC-ccccccCH
Confidence 788 8888887643 33333333 23457999999999999999999999999999999998 67666555
Q ss_pred HHHHH
Q 022090 229 YLGVV 233 (303)
Q Consensus 229 ~~~~~ 233 (303)
.+...
T Consensus 233 ~~~~~ 237 (484)
T 3o0h_A 233 DLRQL 237 (484)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 79
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.80 E-value=2.3e-20 Score=169.57 Aligned_cols=159 Identities=17% Similarity=0.174 Sum_probs=115.3
Q ss_pred CCcEEEECCcHHHHHHHHHHhh-C------CCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSL-Q------SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVS 79 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~-~------g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (303)
+++|+|||||++|+++|..|++ . |.+|+|||+.+.+||.|++.+. +.++.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv~-----------------------p~~~~ 59 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVA-----------------------PDHPK 59 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSC-----------------------TTCTG
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccccccC-----------------------CCCCC
Confidence 4799999999999999999999 7 9999999999888888864321 22233
Q ss_pred HHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCC-CCCCCCCC
Q 022090 80 RAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN-PFTPDIRG 158 (303)
Q Consensus 80 ~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~-p~~p~~~g 158 (303)
..++..++.+++++.+++. +.+..+ . . .|.+.+ .. +.||+||+||| +. |+.|++||
T Consensus 60 ~~~~~~~~~~~~~~~~v~~--~~~v~v------~--~--~v~~~~--------~~-~~~d~lViAtG--~~~~~~~~ipG 116 (456)
T 1lqt_A 60 IKSISKQFEKTAEDPRFRF--FGNVVV------G--E--HVQPGE--------LS-ERYDAVIYAVG--AQSDRMLNIPG 116 (456)
T ss_dssp GGGGHHHHHHHHTSTTEEE--EESCCB------T--T--TBCHHH--------HH-HHSSEEEECCC--CCEECCCCCTT
T ss_pred HHHHHHHHHHHHhcCCCEE--EeeEEE------C--C--EEEECC--------Ce-EeCCEEEEeeC--CCCCCCCCCCC
Confidence 4567777877777666543 545332 1 1 133332 24 78999999999 54 56778888
Q ss_pred ccccccCCCCCccEEecccC-----------CCCCCCCCCeEEEECCCccHHHHHHHHhhc-------------------
Q 022090 159 LCSFCSSATGTGEVIHSTQY-----------KNGKPYGGKNVLVVGSGNSGMEIALDLANH------------------- 208 (303)
Q Consensus 159 ~~~~~~~~~~~g~~~~~~~~-----------~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~------------------- 208 (303)
.+ + .+ ++++.++ .+...+.+++++|||+|++|+|+|..|++.
T Consensus 117 ~~-~------~g-v~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~ 188 (456)
T 1lqt_A 117 ED-L------PG-SIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRP 188 (456)
T ss_dssp TT-S------TT-EEEHHHHHHHHTTCGGGTTCCCCCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTT
T ss_pred CC-C------CC-cEEHHHHHhhhhcCcccccchhhcCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHH
Confidence 76 3 44 4444332 222234689999999999999999999974
Q ss_pred -c-CceEEEeecC
Q 022090 209 -A-AKTSLVVRSP 219 (303)
Q Consensus 209 -g-~~vt~~~r~~ 219 (303)
+ .+|+++.|++
T Consensus 189 ~g~~~V~lv~r~~ 201 (456)
T 1lqt_A 189 RGIQEVVIVGRRG 201 (456)
T ss_dssp CCCCEEEEECSSC
T ss_pred CCCcEEEEEecCC
Confidence 4 4899999998
No 80
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.79 E-value=5.3e-20 Score=167.33 Aligned_cols=162 Identities=17% Similarity=0.160 Sum_probs=115.7
Q ss_pred CCCCcEEEECCcHHHHHHHHHHhhCC--CCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHH
Q 022090 5 AAGVEVIMVGAGTSGLATAACLSLQS--IPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQ 82 (303)
Q Consensus 5 ~~~~~vvIIGaG~aGl~~A~~l~~~g--~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (303)
..+++|+|||||++|+++|..|++.| .+|+|||+.+.++|.|+..+. +.++...+
T Consensus 4 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~~-----------------------p~~~~~~~ 60 (460)
T 1cjc_A 4 EQTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVA-----------------------PDHPEVKN 60 (460)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSC-----------------------TTCGGGGG
T ss_pred CCCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecccC-----------------------CCCccHHH
Confidence 34689999999999999999999998 899999999988888865321 11222346
Q ss_pred HHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCC-CCCCCCCccc
Q 022090 83 FIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNP-FTPDIRGLCS 161 (303)
Q Consensus 83 l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p-~~p~~~g~~~ 161 (303)
+..++.++++++++.. ++++.|. . .|.+.+ .. +.||+||+||| +.| +.|++||.+.
T Consensus 61 ~~~~~~~~~~~~gv~~--~~~~~v~--------~--~V~~~~--------~~-~~~d~lVlAtG--s~~~~~~~ipG~~~ 117 (460)
T 1cjc_A 61 VINTFTQTARSDRCAF--YGNVEVG--------R--DVTVQE--------LQ-DAYHAVVLSYG--AEDHQALDIPGEEL 117 (460)
T ss_dssp HHHHHHHHHTSTTEEE--EBSCCBT--------T--TBCHHH--------HH-HHSSEEEECCC--CCEECCCCCTTTTS
T ss_pred HHHHHHHHHHhCCcEE--EeeeEEe--------e--EEEecc--------ce-EEcCEEEEecC--cCCCCCCCCCCCCC
Confidence 6777777777776554 6665441 1 122222 34 68999999999 554 6788998752
Q ss_pred cccCCCCCccEEecccC----------CCCC-CCCCCeEEEECCCccHHHHHHHHh--------------------hccC
Q 022090 162 FCSSATGTGEVIHSTQY----------KNGK-PYGGKNVLVVGSGNSGMEIALDLA--------------------NHAA 210 (303)
Q Consensus 162 ~~~~~~~~g~~~~~~~~----------~~~~-~~~~~~v~ViG~G~~g~e~a~~l~--------------------~~g~ 210 (303)
.+ ++++.++ .... .+.+++++|||+|++|+|+|..|+ +.+.
T Consensus 118 -------~g-v~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~ 189 (460)
T 1cjc_A 118 -------PG-VFSARAFVGWYNGLPENRELAPDLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRV 189 (460)
T ss_dssp -------TT-EEEHHHHHHHHTTCGGGTTCCCCTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCC
T ss_pred -------Cc-EEEHHHHHHHhhcCccccccccCCCCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCC
Confidence 33 3444332 1111 236899999999999999999999 5676
Q ss_pred -ceEEEeecCe
Q 022090 211 -KTSLVVRSPV 220 (303)
Q Consensus 211 -~vt~~~r~~~ 220 (303)
+||++.|++.
T Consensus 190 ~~V~lv~r~~~ 200 (460)
T 1cjc_A 190 KTVWIVGRRGP 200 (460)
T ss_dssp CEEEEECSSCG
T ss_pred cEEEEEEcCCh
Confidence 7999999984
No 81
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.79 E-value=3.3e-20 Score=176.99 Aligned_cols=166 Identities=21% Similarity=0.231 Sum_probs=123.9
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHH
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 85 (303)
.++||+|||||++|+++|..|+++|++|+|||+++.+||.|.... ..+.+....++.+
T Consensus 390 ~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~~~----------------------~~p~~~~~~~~~~ 447 (690)
T 3k30_A 390 SDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQES----------------------ALPGLSAWGRVKE 447 (690)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHHHH----------------------TSTTCGGGGHHHH
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeeecc----------------------CCCchhHHHHHHH
Confidence 457999999999999999999999999999999999998865310 0112234457888
Q ss_pred HHHHHHHHc-CCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCC------CCCCCCCC
Q 022090 86 HLDHYVSHF-NIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN------PFTPDIRG 158 (303)
Q Consensus 86 ~l~~~~~~~-~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~------p~~p~~~g 158 (303)
|+...++++ +++. ++++.++ ..+. .. +.+|+||+|||.... |..|.+||
T Consensus 448 ~~~~~~~~~~gv~~--~~~~~v~--------------~~~~-------~~-~~~d~lvlAtG~~~~~~~~~~~~~~~i~G 503 (690)
T 3k30_A 448 YREAVLAELPNVEI--YRESPMT--------------GDDI-------VE-FGFEHVITATGATWRTDGVARFHTTALPI 503 (690)
T ss_dssp HHHHHHHTCTTEEE--ESSCCCC--------------HHHH-------HH-TTCCEEEECCCEEECSSCCSSSCSSCCCB
T ss_pred HHHHHHHHcCCCEE--EECCeec--------------HHHH-------hh-cCCCEEEEcCCCccccccccccCCCCCCC
Confidence 888888876 5543 5554321 1111 35 789999999995322 55777887
Q ss_pred ccccccCCCCCccEEecccCCCCCCCCCCeEEEEC--CCccHHHHHHHHhhccCceEEEeecCeeeeehh
Q 022090 159 LCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVG--SGNSGMEIALDLANHAAKTSLVVRSPVHVLSRE 226 (303)
Q Consensus 159 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~ViG--~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp~~ 226 (303)
.+. ..+++..++.......+++++||| +|.+|+|+|..|++.|.+||++++.+ .+++..
T Consensus 504 ~~~--------~~v~~~~~~l~~~~~~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~-~l~~~~ 564 (690)
T 3k30_A 504 AEG--------MQVLGPDDLFAGRLPDGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGA-QVSSWT 564 (690)
T ss_dssp CTT--------SEEECHHHHHTTCCCSSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSS-STTGGG
T ss_pred CCC--------CcEEcHHHHhCCCCCCCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccc-cccccc
Confidence 652 346666666555555678999999 99999999999999999999999998 555543
No 82
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.78 E-value=1.1e-19 Score=174.19 Aligned_cols=171 Identities=17% Similarity=0.186 Sum_probs=118.2
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHH
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 85 (303)
..+||+|||||++|+++|..|++.|++|+|||+++.+||.|.... .+ +.+.....+.+
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~-------------~~---------pg~~~~~~~~~ 445 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQVA-------------AL---------PGLGEWSYHRD 445 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHHT-------------TS---------TTCGGGHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeecc-------------cC---------CChHHHHHHHH
Confidence 357999999999999999999999999999999999999876420 00 11122345666
Q ss_pred HHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCC------CCCCCCCCc
Q 022090 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN------PFTPDIRGL 159 (303)
Q Consensus 86 ~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~------p~~p~~~g~ 159 (303)
|+...++.+. ..+..+..+.. . ..+...++ .. +.||+||+|||.... |..|++||.
T Consensus 446 ~~~~~i~~~~-----~~~~~~v~i~~-~----~~v~~~~~-------~~-~~~d~vviAtG~~~~~~~~~~p~~~~ipG~ 507 (729)
T 1o94_A 446 YRETQITKLL-----KKNKESQLALG-Q----KPMTADDV-------LQ-YGADKVIIATGARWNTDGTNCLTHDPIPGA 507 (729)
T ss_dssp HHHHHHHHHH-----HHSTTCEEECS-C----CCCCHHHH-------HT-SCCSEEEECCCEEECSSCCCTTTSSCCTTC
T ss_pred HHHHHHHHhh-----cccCCceEEEe-C----eEEehhhc-------cc-cCCCEEEEcCCCCcccccccCccCCCCCCc
Confidence 6666555430 00001111111 0 12222222 34 789999999995322 567788998
Q ss_pred cccccCCCCCccEEecccCCCCCCCCCCeEEEEC--CCccHHHHHHHHhhccCceEEEeecCeeeee
Q 022090 160 CSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVG--SGNSGMEIALDLANHAAKTSLVVRSPVHVLS 224 (303)
Q Consensus 160 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~ViG--~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp 224 (303)
+.+ ...+++..++.......+++|+||| +|.+|+|+|..|++.|.+||+++|.+ +++
T Consensus 508 ~~~------~~~v~~~~~~l~~~~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~--l~~ 566 (729)
T 1o94_A 508 DAS------LPDQLTPEQVMDGKKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH--LAN 566 (729)
T ss_dssp CTT------STTEECHHHHHHCCSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC--TTH
T ss_pred ccc------CCCEEEHHHHhcCCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc--ccc
Confidence 755 4456666655544445678999999 99999999999999999999999987 444
No 83
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.75 E-value=1.2e-18 Score=165.87 Aligned_cols=150 Identities=20% Similarity=0.268 Sum_probs=112.0
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHH
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 85 (303)
.++||+|||||++|+++|..|++.|++|+|||+++.+||.|.... .+ +......++.+
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~-------------~~---------~~~~~~~~~~~ 429 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAK-------------QI---------PGKEEFYETLR 429 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHT-------------TS---------TTCTTHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccc-------------cC---------CCHHHHHHHHH
Confidence 357999999999999999999999999999999999998875310 00 11112345666
Q ss_pred HHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEE-eeCEEEEccCCCCCCCCCCCCCcccccc
Q 022090 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYY-SGRFLVVASGETTNPFTPDIRGLCSFCS 164 (303)
Q Consensus 86 ~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~-~ad~vIlAtG~~~~p~~p~~~g~~~~~~ 164 (303)
++...+++++++. ++++.|+. .. + .||+||+||| +.|..|++||.+.
T Consensus 430 ~~~~~~~~~gv~~--~~~~~v~~------------------------~~-~~~~d~lviAtG--~~p~~~~i~G~~~--- 477 (671)
T 1ps9_A 430 YYRRMIEVTGVTL--KLNHTVTA------------------------DQ-LQAFDETILASG--IVPRTPPIDGIDH--- 477 (671)
T ss_dssp HHHHHHHHHTCEE--EESCCCCS------------------------SS-SCCSSEEEECCC--EEECCCCCBTTTS---
T ss_pred HHHHHHHHcCCEE--EeCcEecH------------------------HH-hhcCCEEEEccC--CCcCCCCCCCCCC---
Confidence 7777777777655 66653310 12 5 7899999999 7888899998753
Q ss_pred CCCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEE
Q 022090 165 SATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSL 214 (303)
Q Consensus 165 ~~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~ 214 (303)
..++++.++.......+++|+|||+|.+|+|+|..|++.|.+|++
T Consensus 478 -----~~v~~~~~~l~~~~~~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv 522 (671)
T 1ps9_A 478 -----PKVLSYLDVLRDKAPVGNKVAIIGCGGIGFDTAMYLSQPGESTSQ 522 (671)
T ss_dssp -----TTEEEHHHHHTSCCCCCSEEEEECCHHHHHHHHHHHTCCSSCGGG
T ss_pred -----CcEeeHHHHhhCCCCCCCeEEEECCChhHHHHHHHHHhcCCCccc
Confidence 235666555544445689999999999999999999998876553
No 84
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.75 E-value=6.8e-18 Score=166.02 Aligned_cols=181 Identities=15% Similarity=0.150 Sum_probs=119.9
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
.+||+|||||++|+++|..|++.|++|+|||+++.+||.|. .+ +...+ . . .+..++...
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~-~~-~k~~i---------~---------~-~~~~~~~~~ 186 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLL-DT-AGEQI---------D---------G-MDSSAWIEQ 186 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG-GS-SCCEE---------T---------T-EEHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec-cC-Ccccc---------C---------C-CCHHHHHHH
Confidence 46899999999999999999999999999999999998876 21 11000 0 0 112344444
Q ss_pred HHHHHHHc-CCCceeEeCeEEEEEEEeCC-------CCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCC
Q 022090 87 LDHYVSHF-NIGPSIRYQRSVESASYDEA-------TNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRG 158 (303)
Q Consensus 87 l~~~~~~~-~l~~~i~~~~~V~~i~~~~~-------~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g 158 (303)
+.+.+..+ +++ ++.+++|.++..... .+.+.+...+.... ..... +.||+||+||| +.|+.|++||
T Consensus 187 ~~~~l~~~~~v~--~~~~~~V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~-~~~~~-i~~d~lVlATG--s~p~~~~ipG 260 (965)
T 2gag_A 187 VTSELAEAEETT--HLQRTTVFGSYDANYLIAAQRRTVHLDGPSGPGVSR-ERIWH-IRAKQVVLATG--AHERPIVFEN 260 (965)
T ss_dssp HHHHHHHSTTEE--EESSEEEEEEETTTEEEEEEECSTTCSSCCCTTCCS-EEEEE-EEEEEEEECCC--EEECCCCCBT
T ss_pred HHHHHhhcCCcE--EEeCCEEEeeecCCceeeeEeecccccccccccCCC-CceEE-EECCEEEECCC--CccCCCCCCC
Confidence 44445444 544 478888888753220 00111111000000 01146 89999999999 6788888888
Q ss_pred ccccccCCCCCccEEecccC---CC-CCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecCeeee
Q 022090 159 LCSFCSSATGTGEVIHSTQY---KN-GKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVL 223 (303)
Q Consensus 159 ~~~~~~~~~~~g~~~~~~~~---~~-~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~~~l 223 (303)
.+. .| ++++... .. .....+++++|||+|.+|+|+|..|++.|.+||++++++ .++
T Consensus 261 ~~~-------~g-v~~~~~~~~~l~~~~~~~gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~-~~~ 320 (965)
T 2gag_A 261 NDR-------PG-IMLAGAVRSYLNRYGVRAGARIAVATTNDSAYELVRELAATGGVVAVIDARS-SIS 320 (965)
T ss_dssp CCS-------TT-EEEHHHHHHHHHTTCEESCSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCS-SCC
T ss_pred CCC-------CC-EEEhHHHHHHHHhcCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCC-ccc
Confidence 753 33 3443211 11 122346899999999999999999999999999999998 443
No 85
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=99.74 E-value=1.5e-19 Score=166.13 Aligned_cols=195 Identities=19% Similarity=0.226 Sum_probs=117.1
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHH
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 85 (303)
.+++|||||||++|+++|..|.+.+++|+|||+++.. . |..+ +.... ....+..++..
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~--~-----~~Pl-------L~~va--------~G~l~~~~i~~ 98 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYF--L-----FTPL-------LPSAP--------VGTVDEKSIIE 98 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEE--E-----CGGG-------GGGTT--------TTSSCGGGGEE
T ss_pred CCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCc--c-----cccc-------hhHHh--------hccccHHHhhh
Confidence 4568999999999999999999999999999998741 0 1000 00000 01111112211
Q ss_pred HHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecC-----------CCCceeEEEEeeCEEEEccCCCCCCCCC
Q 022090 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLL-----------SPGREIEEYYSGRFLVVASGETTNPFTP 154 (303)
Q Consensus 86 ~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~-----------~~~~~~~~~~~ad~vIlAtG~~~~p~~p 154 (303)
.+........-... ....+|++|+.+. ...++...+.. ....+..+ +.||+||+||| +.|+.+
T Consensus 99 p~~~~~~~~~~~v~-~~~~~v~~ID~~~--k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~-i~YD~LViAtG--s~~~~~ 172 (502)
T 4g6h_A 99 PIVNFALKKKGNVT-YYEAEATSINPDR--NTVTIKSLSAVSQLYQPENHLGLHQAEPAE-IKYDYLISAVG--AEPNTF 172 (502)
T ss_dssp EHHHHHTTCSSCEE-EEEEEEEEEEGGG--TEEEEEEEEEEEECSSSCCCCCCCTTCCEE-EECSEEEECCC--CEECCT
T ss_pred hHHHHHHhhcCCeE-EEEEEEEEEEhhh--CEEEEeecccceeecccccccccccCCceE-EeCCEEEEcCC--cccccC
Confidence 22222222111121 3456788888765 33333221100 00002267 89999999999 888889
Q ss_pred CCCCccccccCCCCCccEEecccCC-------------------CCC---CCCCCeEEEECCCccHHHHHHHHhhcc---
Q 022090 155 DIRGLCSFCSSATGTGEVIHSTQYK-------------------NGK---PYGGKNVLVVGSGNSGMEIALDLANHA--- 209 (303)
Q Consensus 155 ~~~g~~~~~~~~~~~g~~~~~~~~~-------------------~~~---~~~~~~v~ViG~G~~g~e~a~~l~~~g--- 209 (303)
.+||.+.++ +...... ... .....+++|||+|++|+|+|.+|++.+
T Consensus 173 ~ipG~~e~a---------~~l~t~~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~ 243 (502)
T 4g6h_A 173 GIPGVTDYG---------HFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQD 243 (502)
T ss_dssp TCTTHHHHC---------EECSSHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHT
T ss_pred CccCccccc---------CCCCCHHHHHHHHHHHHHHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHH
Confidence 999976531 1111100 000 011247999999999999999998653
Q ss_pred -----------CceEEEeecCeeeeehhhHHHHHHHHhhC
Q 022090 210 -----------AKTSLVVRSPVHVLSREMVYLGVVLFKYV 238 (303)
Q Consensus 210 -----------~~vt~~~r~~~~~lp~~~~~~~~~~~~~l 238 (303)
.+|+++++.+ .++|..+.+++..+.+.|
T Consensus 244 l~~~~~~~~~~~~V~lve~~~-~il~~~~~~~~~~~~~~L 282 (502)
T 4g6h_A 244 LRKFLPALAEEVQIHLVEALP-IVLNMFEKKLSSYAQSHL 282 (502)
T ss_dssp HHHHCHHHHHHCEEEEECSSS-SSSTTSCHHHHHHHHHHH
T ss_pred HHhhcccccccceeEEecccc-ccccCCCHHHHHHHHHHH
Confidence 5799999999 788877666665554443
No 86
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.74 E-value=1.2e-18 Score=172.32 Aligned_cols=171 Identities=18% Similarity=0.257 Sum_probs=116.7
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCC-CeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSI-PYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~-~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 85 (303)
.+||+|||||++|+++|..|+++|+ +|+|||+.+.+||.+.+. .+.+ ....++.+
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~~---------------ip~~---------~~~~~~~~ 242 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSE---------------IPQF---------RLPYDVVN 242 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHHHT---------------SCTT---------TSCHHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCcccccc---------------CCcc---------cCCHHHHH
Confidence 5799999999999999999999999 799999999999876432 1111 11235666
Q ss_pred HHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCC-CCcccccc
Q 022090 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDI-RGLCSFCS 164 (303)
Q Consensus 86 ~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~-~g~~~~~~ 164 (303)
+..+++++++++. ++++.+.. ..+.+.++ .. +.||+||+|||+ ..|+.+++ +|.+..
T Consensus 243 ~~~~~~~~~gv~~--~~~~~v~~---------~~v~~~~~-------~~-~~~d~vvlAtGa-~~p~~l~~~~G~~~~-- 300 (1025)
T 1gte_A 243 FEIELMKDLGVKI--ICGKSLSE---------NEITLNTL-------KE-EGYKAAFIGIGL-PEPKTDDIFQGLTQD-- 300 (1025)
T ss_dssp HHHHHHHTTTCEE--EESCCBST---------TSBCHHHH-------HH-TTCCEEEECCCC-CEECCCGGGTTCCTT--
T ss_pred HHHHHHHHCCcEE--EcccEecc---------ceEEhhhc-------Cc-cCCCEEEEecCC-CCCCCCCCCCCCCCC--
Confidence 7677777777655 66665521 12333322 34 689999999994 14655543 455422
Q ss_pred CCCCCccEEecccCC--------------C-CCCCCCCeEEEECCCccHHHHHHHHhhccC-ceEEEeecCeeeeehhhH
Q 022090 165 SATGTGEVIHSTQYK--------------N-GKPYGGKNVLVVGSGNSGMEIALDLANHAA-KTSLVVRSPVHVLSREMV 228 (303)
Q Consensus 165 ~~~~~g~~~~~~~~~--------------~-~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~-~vt~~~r~~~~~lp~~~~ 228 (303)
.+ ++++.++. . .....+++|+|||+|.+|+|+|..+.+.|. +||+++|++..++|....
T Consensus 301 ----~g-v~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~~~~~~~~ 375 (1025)
T 1gte_A 301 ----QG-FYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVNIRAVPE 375 (1025)
T ss_dssp ----TT-EEEHHHHHHHHHHHHCBTTBSCCCCCCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGGGCCSCHH
T ss_pred ----CC-EEEhHHHHHHHHhhcccccccccccccccCCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecChhhCCCCHH
Confidence 22 33322221 1 112346799999999999999999999996 899999998556665443
No 87
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.69 E-value=4.5e-18 Score=152.72 Aligned_cols=178 Identities=15% Similarity=0.103 Sum_probs=112.8
Q ss_pred CcEEEECCcHHHHHHHHHHhh---CCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHH
Q 022090 8 VEVIMVGAGTSGLATAACLSL---QSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~---~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 84 (303)
++|+|||||++|+++|..|++ .|.+|+|+|+++..+.... ++.. ........++.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~-----------------~~~~-----~~~~~~~~~~~ 59 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPA-----------------LPHV-----AIGVRDVDELK 59 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCS-----------------SCCC-----CSSCCCCCCEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccc-----------------hhhc-----ccCCcCHHHHH
Confidence 589999999999999999999 8999999999885321100 0000 01111122333
Q ss_pred HHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCCcccccc
Q 022090 85 EHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCS 164 (303)
Q Consensus 85 ~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~~~~ 164 (303)
.++.+.+++++++. +.+ +|+.++.+. ..|.+.++.. +..+ +.||+||+||| +.|..|.+||.+..
T Consensus 60 ~~~~~~~~~~gv~~--~~~-~v~~i~~~~----~~V~~~~g~~---~~~~-~~~d~lViAtG--~~~~~~~ipG~~~~-- 124 (409)
T 3h8l_A 60 VDLSEALPEKGIQF--QEG-TVEKIDAKS----SMVYYTKPDG---SMAE-EEYDYVIVGIG--AHLATELVKGWDKY-- 124 (409)
T ss_dssp EEHHHHTGGGTCEE--EEC-EEEEEETTT----TEEEEECTTS---CEEE-EECSEEEECCC--CEECGGGSBTHHHH--
T ss_pred HHHHHHHhhCCeEE--EEe-eEEEEeCCC----CEEEEccCCc---ccce-eeCCEEEECCC--CCcCccCCCChhhc--
Confidence 44555666667664 555 888887654 3566665432 2356 89999999999 67888888887642
Q ss_pred CCCCCccEEecccCCCCCCC------CCCeEEEECCCc-------------------------cHHHHHHHH----hhcc
Q 022090 165 SATGTGEVIHSTQYKNGKPY------GGKNVLVVGSGN-------------------------SGMEIALDL----ANHA 209 (303)
Q Consensus 165 ~~~~~g~~~~~~~~~~~~~~------~~~~v~ViG~G~-------------------------~g~e~a~~l----~~~g 209 (303)
..+...+...... ..++++|||+|. .++|+|..+ .+.|
T Consensus 125 -------~~~~~~~~~~~~~~~~l~~~~~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~~g 197 (409)
T 3h8l_A 125 -------GYSVCEPEFATKLREKLESFQGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKG 197 (409)
T ss_dssp -------CEESSSTTHHHHHHHHHHHCCSEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHTTT
T ss_pred -------CcCcCCHHHHHHHHHHHHHhcCCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHHHcC
Confidence 2333332221111 125677999992 377888554 4556
Q ss_pred C----ceEEEeecCeeeeehhhHHHH
Q 022090 210 A----KTSLVVRSPVHVLSREMVYLG 231 (303)
Q Consensus 210 ~----~vt~~~r~~~~~lp~~~~~~~ 231 (303)
. +|+++++.+ ++|.....+.
T Consensus 198 ~~~~~~v~~~~~~~--~l~~~~~~~~ 221 (409)
T 3h8l_A 198 MLDKVHVTVFSPGE--YLSDLSPNSR 221 (409)
T ss_dssp CTTTEEEEEECSSS--SSTTBCHHHH
T ss_pred CCCCeEEEEEeCCc--cccccCHHHH
Confidence 3 899999887 5555443333
No 88
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.67 E-value=3.7e-18 Score=156.74 Aligned_cols=186 Identities=12% Similarity=0.127 Sum_probs=107.1
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhC--CCCeEEEecCCCCCCccC--cCCC-CceEEecCcccccCCCCCCCC------CC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQ--SIPYVILERENCYASIWK--KYSY-DRLRLHLAKQFCQLPHLPFPS------SY 74 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~--g~~v~iie~~~~~gg~w~--~~~~-~~~~~~~~~~~~~~~~~~~~~------~~ 74 (303)
..+||+|||||++|+++|..|++. +.+|+|||+++..+.... ...+ ....... .....+..++... ..
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 88 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNV-TKTLRFKQWNGKERSIYFQPP 88 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSGGGGTGGGCC--CTH-HHHCEEECTTSCEEESBSSCG
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCHHhhcCCccch-hhcccccccccccccccccch
Confidence 457999999999999999999887 889999999876541100 0000 0000000 0000000000000 00
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCC
Q 022090 75 PMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTP 154 (303)
Q Consensus 75 ~~~~~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p 154 (303)
..+....++.+ ....+ ..++++++|++++... ++|.+.++ .+ +.||+||+||| +.|+.|
T Consensus 89 ~~~~~~~~l~~-----~~~~g--v~~~~g~~v~~id~~~----~~V~~~~g-------~~-i~yd~lviATG--s~p~~~ 147 (493)
T 1m6i_A 89 SFYVSAQDLPH-----IENGG--VAVLTGKKVVQLDVRD----NMVKLNDG-------SQ-ITYEKCLIATG--GTPRSL 147 (493)
T ss_dssp GGSBCTTTTTT-----STTCE--EEEEETCCEEEEEGGG----TEEEETTS-------CE-EEEEEEEECCC--EEECCC
T ss_pred Hhhcchhhhhh-----hhcCC--eEEEcCCEEEEEECCC----CEEEECCC-------CE-EECCEEEECCC--CCCCCC
Confidence 00111111100 01223 3447888999987654 56777654 56 89999999999 777766
Q ss_pred CCCCcc--ccccCCCCCccEEecccCCC-----CCCCCCCeEEEECCCccHHHHHHHHhh----ccCceEEEeecC
Q 022090 155 DIRGLC--SFCSSATGTGEVIHSTQYKN-----GKPYGGKNVLVVGSGNSGMEIALDLAN----HAAKTSLVVRSP 219 (303)
Q Consensus 155 ~~~g~~--~~~~~~~~~g~~~~~~~~~~-----~~~~~~~~v~ViG~G~~g~e~a~~l~~----~g~~vt~~~r~~ 219 (303)
++++.. .+ ...+.......+ .....+++++|||+|.+|+|+|..|++ .|.+|+++++.+
T Consensus 148 ~~~~~~~~~~------~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~ 217 (493)
T 1m6i_A 148 SAIDRAGAEV------KSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEK 217 (493)
T ss_dssp HHHHTSCHHH------HHTEEECCSHHHHHHHHHHHHHCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCcccccccc------cCceEEEcCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCc
Confidence 654421 11 111222211111 011247899999999999999999987 467899998876
No 89
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.67 E-value=5.4e-18 Score=153.52 Aligned_cols=170 Identities=18% Similarity=0.278 Sum_probs=112.9
Q ss_pred CCcEEEECCcHHHHHHHHHHhh---CCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSL---QSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQF 83 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~---~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 83 (303)
+++|+|||||++|+++|..|++ .|.+|+|||+++... |.. . . +.........+++
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~-------~~~------~-------~--~~~~~g~~~~~~~ 61 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQ-------FVP------S-------N--PWVGVGWKERDDI 61 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEE-------CGG------G-------H--HHHHHTSSCHHHH
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCc-------ccC------C-------c--cccccCccCHHHH
Confidence 4799999999999999999999 799999999987421 100 0 0 0000122334455
Q ss_pred HHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCCccccc
Q 022090 84 IEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFC 163 (303)
Q Consensus 84 ~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~~~ 163 (303)
...+.++++..+++. + ..+|+.++.+. ..|.+.++ .+ +.||+||+||| +.|+.|.+||.+.+
T Consensus 62 ~~~l~~~~~~~gv~~--~-~~~v~~id~~~----~~V~~~~g-------~~-i~~d~lviAtG--~~~~~~~ipG~~~~- 123 (437)
T 3sx6_A 62 AFPIRHYVERKGIHF--I-AQSAEQIDAEA----QNITLADG-------NT-VHYDYLMIATG--PKLAFENVPGSDPH- 123 (437)
T ss_dssp EEECHHHHHTTTCEE--E-CSCEEEEETTT----TEEEETTS-------CE-EECSEEEECCC--CEECGGGSTTCSTT-
T ss_pred HHHHHHHHHHCCCEE--E-EeEEEEEEcCC----CEEEECCC-------CE-EECCEEEECCC--CCcCcccCCCCCcc-
Confidence 566677777777664 3 56888887654 35666654 56 89999999999 77888889998753
Q ss_pred cCCCCCccEEecccCCCCCC--------CCCCeEEEECCCcc----H--HHHHH----HHhhccCc-----eEEEeecCe
Q 022090 164 SSATGTGEVIHSTQYKNGKP--------YGGKNVLVVGSGNS----G--MEIAL----DLANHAAK-----TSLVVRSPV 220 (303)
Q Consensus 164 ~~~~~~g~~~~~~~~~~~~~--------~~~~~v~ViG~G~~----g--~e~a~----~l~~~g~~-----vt~~~r~~~ 220 (303)
.+..++...+.+... ..+++++|||+|.+ | +|+|. .+.+.|.+ ||++++.+
T Consensus 124 -----~~~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~- 197 (437)
T 3sx6_A 124 -----EGPVQSICTVDHAERAFAEYQALLREPGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEP- 197 (437)
T ss_dssp -----TSSEECCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSS-
T ss_pred -----cCcceecccccHHHHHHHHHHHHHhCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCc-
Confidence 343333332221100 11456789998655 4 88884 44555654 99999988
Q ss_pred ee
Q 022090 221 HV 222 (303)
Q Consensus 221 ~~ 222 (303)
.+
T Consensus 198 ~~ 199 (437)
T 3sx6_A 198 YI 199 (437)
T ss_dssp ST
T ss_pred cc
Confidence 44
No 90
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.63 E-value=5.3e-16 Score=138.61 Aligned_cols=135 Identities=16% Similarity=0.188 Sum_probs=87.2
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCc---------CCCC--ceEEecCccccc-----C-----
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK---------YSYD--RLRLHLAKQFCQ-----L----- 65 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~---------~~~~--~~~~~~~~~~~~-----~----- 65 (303)
.+||+|||||++|+++|..|+++|.+|+|+|+++.+|+.|.. +.+. ...+.....+.. +
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 83 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDF 83 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHH
Confidence 489999999999999999999999999999999877653320 0000 000000000000 0
Q ss_pred ------CCCCCC--CCCCCCC--CHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCC--CCeEEEEEeecCCCCceeE
Q 022090 66 ------PHLPFP--SSYPMFV--SRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEA--TNMWNVKASNLLSPGREIE 133 (303)
Q Consensus 66 ------~~~~~~--~~~~~~~--~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~--~~~~~v~~~~~~~~~~~~~ 133 (303)
...++. ..-..|+ ...++.+++.+.+++.+++. +++++|+++..+++ .+.|.|.+.+ .
T Consensus 84 ~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i--~~~~~v~~i~~~~~g~~~~~~v~~~~--------g 153 (401)
T 2gqf_A 84 ISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKI--LLRSEVSQVERIQNDEKVRFVLQVNS--------T 153 (401)
T ss_dssp HHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEE--ECSCCEEEEEECCSCSSCCEEEEETT--------E
T ss_pred HHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEE--EeCCEEEEEEcccCcCCCeEEEEECC--------C
Confidence 000000 0001112 56788889999888888765 99999999987621 2457777654 4
Q ss_pred EEEeeCEEEEccCCCCCCC
Q 022090 134 EYYSGRFLVVASGETTNPF 152 (303)
Q Consensus 134 ~~~~ad~vIlAtG~~~~p~ 152 (303)
+ +++|.||+|||..+.|.
T Consensus 154 ~-i~ad~VVlAtG~~s~p~ 171 (401)
T 2gqf_A 154 Q-WQCKNLIVATGGLSMPG 171 (401)
T ss_dssp E-EEESEEEECCCCSSCGG
T ss_pred E-EECCEEEECCCCccCCC
Confidence 6 89999999999766543
No 91
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.60 E-value=2.1e-15 Score=138.44 Aligned_cols=163 Identities=18% Similarity=0.147 Sum_probs=107.2
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
++||+|||||++|+++|..|++. ++|+|||+++.+||.|....+. .+.+ +. ...++..+
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~---------~~g~---------~~--~~~~~~~~ 166 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIK---------QEGF---------NK--DSRKVVEE 166 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSE---------ETTT---------TE--EHHHHHHH
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccc---------cCCC---------CC--CHHHHHHH
Confidence 36899999999999999999999 9999999999999887643210 0000 00 22333333
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCCccccccCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSSA 166 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~~~~~~ 166 (303)
+ .+.+.....++++++|.+++.+. ..+.+...+.. +... +.||+||+||| +.|..|.+||.+.
T Consensus 167 l---~~~l~~~v~~~~~~~v~~i~~~~--~~~~~~~~~~~----~~~~-~~~d~lvlAtG--a~~~~~~~~g~~~----- 229 (493)
T 1y56_A 167 L---VGKLNENTKIYLETSALGVFDKG--EYFLVPVVRGD----KLIE-ILAKRVVLATG--AIDSTMLFENNDM----- 229 (493)
T ss_dssp H---HHTCCTTEEEETTEEECCCEECS--SSEEEEEEETT----EEEE-EEESCEEECCC--EEECCCCCTTTTS-----
T ss_pred H---HHHHhcCCEEEcCCEEEEEEcCC--cEEEEEEecCC----eEEE-EECCEEEECCC--CCccCCCCCCCCC-----
Confidence 3 33332233447889998888765 44555443221 2246 89999999999 7778888888753
Q ss_pred CCCccEEecccCC---C-CCCCCCCeEEEECCCccHHHHHHHHhhccCce
Q 022090 167 TGTGEVIHSTQYK---N-GKPYGGKNVLVVGSGNSGMEIALDLANHAAKT 212 (303)
Q Consensus 167 ~~~g~~~~~~~~~---~-~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v 212 (303)
.+ +++..++. . .....+++++|||+|.+|+| ..+.+.|.++
T Consensus 230 --~g-v~~~~~~~~~~~~~~~~~~~~vvViGgG~~gle--~~l~~~GV~v 274 (493)
T 1y56_A 230 --PG-VFRRDFALEVMNVWEVAPGRKVAVTGSKADEVI--QELERWGIDY 274 (493)
T ss_dssp --TT-EEEHHHHHHHHHTSCBCSCSEEEEESTTHHHHH--HHHHHHTCEE
T ss_pred --CC-EEEcHHHHHHHHhcccCCCCEEEEECCCHHHHH--HHHHhCCcEE
Confidence 33 33332221 1 11234689999999999999 5566655443
No 92
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.44 E-value=7.5e-13 Score=118.66 Aligned_cols=134 Identities=15% Similarity=0.143 Sum_probs=88.2
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCc----C-------CCC-ceEEecCcccc----cC----
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK----Y-------SYD-RLRLHLAKQFC----QL---- 65 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~----~-------~~~-~~~~~~~~~~~----~~---- 65 (303)
..+||+|||||++|+++|..|+++|.+|+|+|+.+.+|+.+.. . ..+ ......+.... .+
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 105 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQD 105 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHHH
Confidence 3579999999999999999999999999999999987754311 0 000 00000000000 00
Q ss_pred -------CCCCCC--CCCCC--CCCHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEE
Q 022090 66 -------PHLPFP--SSYPM--FVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEE 134 (303)
Q Consensus 66 -------~~~~~~--~~~~~--~~~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~ 134 (303)
...++. ..-.. .....++.+.+.+.+++.++.. +++++|+++..++ +.|.|.+.+ .+
T Consensus 106 ~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i--~~~~~V~~i~~~~--~~~~V~~~~--------g~ 173 (417)
T 3v76_A 106 FVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQL--RLETSIGEVERTA--SGFRVTTSA--------GT 173 (417)
T ss_dssp HHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEE--ECSCCEEEEEEET--TEEEEEETT--------EE
T ss_pred HHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEE--EECCEEEEEEEeC--CEEEEEECC--------cE
Confidence 000000 00001 1245688889999888888765 9999999998876 568887765 36
Q ss_pred EEeeCEEEEccCCCCCCC
Q 022090 135 YYSGRFLVVASGETTNPF 152 (303)
Q Consensus 135 ~~~ad~vIlAtG~~~~p~ 152 (303)
+.||.||+|||.++.|.
T Consensus 174 -i~ad~VIlAtG~~S~p~ 190 (417)
T 3v76_A 174 -VDAASLVVASGGKSIPK 190 (417)
T ss_dssp -EEESEEEECCCCSSCGG
T ss_pred -EEeeEEEECCCCccCCC
Confidence 89999999999877544
No 93
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.43 E-value=1.9e-15 Score=136.40 Aligned_cols=163 Identities=17% Similarity=0.180 Sum_probs=94.6
Q ss_pred CcEEEECCcHHHHHHHHHHhh--CCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHH
Q 022090 8 VEVIMVGAGTSGLATAACLSL--QSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~--~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 85 (303)
+||+|||||++|+++|..|++ .|++|+|||+++..+...... . .. .......++..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~---~-------~~------------~g~~~~~~~~~ 60 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFP---H-------LA------------MGWRKFEDISV 60 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHH---H-------HH------------HTCSCGGGSEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcc---h-------hc------------cCccCHHHHHH
Confidence 699999999999999999999 789999999998654211000 0 00 00000111111
Q ss_pred HHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCCccccccC
Q 022090 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSS 165 (303)
Q Consensus 86 ~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~~~~~ 165 (303)
.+.+.++..+++. + ..+|+.++.+. ..|.+.++ .+ +.||+||+||| +.|..| |...
T Consensus 61 ~~~~~~~~~gv~~--~-~~~v~~id~~~----~~v~~~~g-------~~-i~~d~liiAtG--~~~~~p---g~~~---- 116 (430)
T 3h28_A 61 PLAPLLPKFNIEF--I-NEKAESIDPDA----NTVTTQSG-------KK-IEYDYLVIATG--PKLVFG---AEGQ---- 116 (430)
T ss_dssp ESTTTGGGGTEEE--E-CSCEEEEETTT----TEEEETTC-------CE-EECSEEEECCC--CEEECC---SBTH----
T ss_pred HHHHHHHhcCCEE--E-EEEEEEEECCC----CEEEECCC-------cE-EECCEEEEcCC--cccccC---CCCC----
Confidence 2222333445543 4 35788887544 25666553 56 89999999999 655555 3321
Q ss_pred CCCCccEEecccCCCCC--------CCCCCeEEEECCCccH------HHHHHHHh----hcc----CceEEEeecC
Q 022090 166 ATGTGEVIHSTQYKNGK--------PYGGKNVLVVGSGNSG------MEIALDLA----NHA----AKTSLVVRSP 219 (303)
Q Consensus 166 ~~~~g~~~~~~~~~~~~--------~~~~~~v~ViG~G~~g------~e~a~~l~----~~g----~~vt~~~r~~ 219 (303)
.+...+.....+.. ...+++++|||+|.+| +|+|..++ +.| .+|+++++.+
T Consensus 117 ---~g~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~~~~~V~~v~~~~ 189 (430)
T 3h28_A 117 ---EENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEP 189 (430)
T ss_dssp ---HHHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSS
T ss_pred ---cCCccCcCCHHHHHHHHHHHHHHHhcCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCccceEEEEecCCc
Confidence 01001111111000 0113467899997654 88885554 455 4789998887
No 94
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.41 E-value=1.6e-12 Score=115.71 Aligned_cols=134 Identities=14% Similarity=0.126 Sum_probs=88.5
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcC------------CCC----------ceEEecCccc--
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY------------SYD----------RLRLHLAKQF-- 62 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~------------~~~----------~~~~~~~~~~-- 62 (303)
.+||+|||||++|+++|..|++.|++|+|+|+++..|+.+... ..+ ......+...
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRP 83 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCCEE
Confidence 4799999999999999999999999999999998666522211 000 1111111100
Q ss_pred ccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEE-EEEeecCCCCceeEEEEeeCEE
Q 022090 63 CQLPHLPFPSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWN-VKASNLLSPGREIEEYYSGRFL 141 (303)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~-v~~~~~~~~~~~~~~~~~ad~v 141 (303)
..+.............++..+..+|.+.+++.|+.. +++++|+++..++ +.+. |.+.+.. +..+ +++|.|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i--~~~~~v~~i~~~~--~~v~gv~~~~~~----~~~~-~~a~~v 154 (397)
T 3cgv_A 84 IILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADV--WVKSPALGVIKEN--GKVAGAKIRHNN----EIVD-VRAKMV 154 (397)
T ss_dssp EEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEE--ESSCCEEEEEEET--TEEEEEEEEETT----EEEE-EEEEEE
T ss_pred EEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEE--EECCEEEEEEEeC--CEEEEEEEEECC----eEEE-EEcCEE
Confidence 001000000111223468889999999988888665 8999999998875 5666 7765432 2257 899999
Q ss_pred EEccCCCC
Q 022090 142 VVASGETT 149 (303)
Q Consensus 142 IlAtG~~~ 149 (303)
|.|+|.++
T Consensus 155 V~A~G~~s 162 (397)
T 3cgv_A 155 IAADGFES 162 (397)
T ss_dssp EECCCTTC
T ss_pred EECCCcch
Confidence 99999766
No 95
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.41 E-value=1.7e-14 Score=125.47 Aligned_cols=150 Identities=13% Similarity=0.043 Sum_probs=101.2
Q ss_pred CCcEEEECCcHHHHHHHHHHhh--CCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSL--QSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~--~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 84 (303)
.+||+||||||+||+||..|++ .|++|+|||+.+.+||......+- ++. ..+.
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~~-----------------~~~--------~~l~ 119 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQL-----------------FSA--------MVMR 119 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCSTT-----------------CCC--------EEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCcc-----------------CCH--------HHHH
Confidence 4799999999999999999975 599999999999888864322110 000 0000
Q ss_pred HHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCCcccccc
Q 022090 85 EHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCS 164 (303)
Q Consensus 85 ~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~~~~ 164 (303)
......++.++++. ..+ . . .. ...+.++++++ ..+..+.++|.+.+
T Consensus 120 ~~~~~~~~e~Gv~~--~~~---------~-----------~-------~~-~~~~~~~~~~~--~~~~~~~~~g~~~~-- 165 (326)
T 3fpz_A 120 KPAHLFLQELEIPY--EDE---------G-----------D-------YV-VVKHAALFIST--VLSKVLQLPNVKLF-- 165 (326)
T ss_dssp TTTHHHHHHTTCCC--EEC---------S-----------S-------EE-EESCHHHHHHH--HHHHHHTSTTEEEE--
T ss_pred HHHHHHHHHcCCEE--EEC---------C-----------c-------ce-ecceeEEEEcc--hhhhccccccceee--
Confidence 11223344566554 211 0 0 22 34455566676 55566778887776
Q ss_pred CCCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 165 SATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 165 ~~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
.+........+......+++++|||+|.+++|.|..+...+.++++..+..
T Consensus 166 ----~~~~~~~~~~~~~~~~~~~~v~viggg~~av~~a~~~~~~~~~v~i~~~~~ 216 (326)
T 3fpz_A 166 ----NATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCAMDPNVIELAGY 216 (326)
T ss_dssp ----TTEEEEEEEEESSCSSSSCEEEEEEEEEHHHHTCTTSSSCCCCEEEEESCB
T ss_pred ----cccccceeeccCCcccCCCEEEEEccCceeeehhhhhhhccCcEEEEeecc
Confidence 665444444445556678999999999999999999999999999887654
No 96
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.40 E-value=1.2e-12 Score=103.63 Aligned_cols=111 Identities=18% Similarity=0.239 Sum_probs=81.2
Q ss_pred CcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHHH
Q 022090 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEHL 87 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 87 (303)
+||+|||||++|+.+|..|++.|.+|+++|+.+.. +... ..+..++. ++......++.+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~---~~~~----------~~~~~~~~------~~~~~~~~~~~~~l 62 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSK---VKGV----------SRVPNYPG------LLDEPSGEELLRRL 62 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCT---TTTC----------SCCCCSTT------CTTCCCHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCc---ccCc----------hhhhccCC------CcCCCCHHHHHHHH
Confidence 68999999999999999999999999999998732 1100 00001111 11224577899999
Q ss_pred HHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCC
Q 022090 88 DHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (303)
Q Consensus 88 ~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~ 153 (303)
.+.+++.+++. +++ +|++++.++ +.|.|.+.+ .+ +++|.||+|+| ..|.+
T Consensus 63 ~~~~~~~gv~v--~~~-~v~~i~~~~--~~~~v~~~~--------g~-i~ad~vI~A~G--~~~~~ 112 (180)
T 2ywl_A 63 EAHARRYGAEV--RPG-VVKGVRDMG--GVFEVETEE--------GV-EKAERLLLCTH--KDPTL 112 (180)
T ss_dssp HHHHHHTTCEE--EEC-CCCEEEECS--SSEEEECSS--------CE-EEEEEEEECCT--TCCHH
T ss_pred HHHHHHcCCEE--EeC-EEEEEEEcC--CEEEEEECC--------CE-EEECEEEECCC--CCCCc
Confidence 99999988765 888 899998765 457777654 26 89999999999 44544
No 97
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.39 E-value=2e-12 Score=114.71 Aligned_cols=134 Identities=13% Similarity=0.137 Sum_probs=85.2
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCc------------C----------CCCceEEecCccccc
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK------------Y----------SYDRLRLHLAKQFCQ 64 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~------------~----------~~~~~~~~~~~~~~~ 64 (303)
.|||+||||||+|+++|..|+++|++|+|+||.+.+|..... . ......+..+.....
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRP 83 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCceE
Confidence 489999999999999999999999999999998765431110 0 001111111110000
Q ss_pred C--CCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEE-EEEeecCCCCceeEEEEeeCEE
Q 022090 65 L--PHLPFPSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWN-VKASNLLSPGREIEEYYSGRFL 141 (303)
Q Consensus 65 ~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~-v~~~~~~~~~~~~~~~~~ad~v 141 (303)
. .............++..+..+|.+.+.+.|.+. +++++|+++..++ +... +...... +..+ +++|.|
T Consensus 84 ~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~--~~~~~v~~~~~~~--~~~~~v~~~~~~----~~~~-~~a~~v 154 (397)
T 3oz2_A 84 IILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADV--WVKSPALGVIKEN--GKVAGAKIRHNN----EIVD-VRAKMV 154 (397)
T ss_dssp EEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEE--ESSCCEEEEEEET--TEEEEEEEEETT----EEEE-EEEEEE
T ss_pred eeccccccCCceeEEEEHHHHHHHHHHHHHhcCcEE--eeeeeeeeeeecc--ceeeeeeecccc----cceE-EEEeEE
Confidence 0 000000011112478899999999998888766 8999999988766 3332 3332221 3357 899999
Q ss_pred EEccCCCC
Q 022090 142 VVASGETT 149 (303)
Q Consensus 142 IlAtG~~~ 149 (303)
|.|+|.+|
T Consensus 155 IgAdG~~S 162 (397)
T 3oz2_A 155 IAADGFES 162 (397)
T ss_dssp EECCCTTC
T ss_pred EeCCcccc
Confidence 99999766
No 98
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.37 E-value=1.4e-13 Score=123.09 Aligned_cols=116 Identities=22% Similarity=0.253 Sum_probs=72.6
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCC--CCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQS--IPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g--~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 84 (303)
.++|+|||||++|+++|..|++.+ .+|+|||+++....+.. .. ... .. ..+.+++.
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~------~~-~v~------~g---------~~~~~~~~ 59 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYM------SN-EVI------GG---------DRELASLR 59 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTT------HH-HHH------HT---------SSCGGGGE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccC------HH-HHh------cC---------CCCHHHHh
Confidence 478999999999999999998876 58999999874221100 00 000 00 00000010
Q ss_pred HHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCCcccc
Q 022090 85 EHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSF 162 (303)
Q Consensus 85 ~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~~ 162 (303)
..+.. +...+++ ....+|++++.+. ..|.+.++ .+ +.||+||+||| +.+.++.+||.+..
T Consensus 60 ~~~~~-~~~~gv~---~i~~~v~~id~~~----~~v~~~~g-------~~-i~yd~LviAtG--~~~~~~~i~G~~e~ 119 (401)
T 3vrd_B 60 VGYDG-LRAHGIQ---VVHDSALGIDPDK----KLVKTAGG-------AE-FAYDRCVVAPG--IDLLYDKIEGYSEA 119 (401)
T ss_dssp ECSHH-HHHTTCE---EECSCEEEEETTT----TEEEETTS-------CE-EECSEEEECCC--EEECGGGSBTCCSG
T ss_pred hCHHH-HHHCCCE---EEEeEEEEEEccC----cEEEeccc-------ce-eecceeeeccC--CccccCCccCchhh
Confidence 00111 2234554 3456788887655 45666654 57 89999999999 77888888887654
No 99
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.35 E-value=2.4e-12 Score=119.95 Aligned_cols=169 Identities=13% Similarity=0.130 Sum_probs=100.3
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC-CCCCccCcCCCCceEEec-----------Ccc--------cccC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN-CYASIWKKYSYDRLRLHL-----------AKQ--------FCQL 65 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~-~~gg~w~~~~~~~~~~~~-----------~~~--------~~~~ 65 (303)
..+||+|||||++|+++|..|++.|.+|+|+|++. .+|... +.+...... ... ...+
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~---Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f 103 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMS---CNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQF 103 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCS---SSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeeccccccccc---ccccccchhhHHHHHHHHHhccHHHHHhhhcccch
Confidence 35899999999999999999999999999999974 343211 111110000 000 0000
Q ss_pred CCC---CCCCCC--CCCCCHHHHHHHHHHHHHH-cCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeC
Q 022090 66 PHL---PFPSSY--PMFVSRAQFIEHLDHYVSH-FNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGR 139 (303)
Q Consensus 66 ~~~---~~~~~~--~~~~~~~~l~~~l~~~~~~-~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad 139 (303)
... ..+..+ ....++..+...+.+.++. .++.+ ++++|+.+..++ +..+.|.+.++ .. +.|+
T Consensus 104 ~~l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I---~~~~V~~L~~e~-g~V~GV~t~dG-------~~-I~Ad 171 (651)
T 3ces_A 104 RILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI---FQQAVEDLIVEN-DRVVGAVTQMG-------LK-FRAK 171 (651)
T ss_dssp EEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEE---EECCEEEEEESS-SBEEEEEETTS-------EE-EEEE
T ss_pred hhhhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEE---EEEEEEEEEecC-CEEEEEEECCC-------CE-EECC
Confidence 000 000000 0123456788888888877 46542 567899887654 23446666543 57 8999
Q ss_pred EEEEccCCCCCCCCCCCCCccccccCCCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEee
Q 022090 140 FLVVASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVR 217 (303)
Q Consensus 140 ~vIlAtG~~~~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r 217 (303)
.||+|||.+ +..+.++|...+ . +.+ +| |.++++++..|.+.|.+|+.+..
T Consensus 172 ~VVLATGt~--s~~~~i~G~~~~------~----------------~gr---iG-g~~a~eLA~~L~~lG~~v~~~~t 221 (651)
T 3ces_A 172 AVVLTVGTF--LDGKIHIGLDNY------S----------------GGR---AG-DPPSIPLSRRLRELPLRVGRLKT 221 (651)
T ss_dssp EEEECCSTT--TCCEEECC---------------------------------------CCHHHHHHHTTTCCEEEECC
T ss_pred EEEEcCCCC--ccCccccCcccC------C----------------CCC---cc-chhhhHHHHHHHhcCCeEEEecC
Confidence 999999954 444456665433 1 222 56 78999999999999999988853
No 100
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.35 E-value=6.9e-12 Score=112.59 Aligned_cols=135 Identities=16% Similarity=0.207 Sum_probs=86.7
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCC----CCCccCcCC--------------------CCceEEecCccc
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENC----YASIWKKYS--------------------YDRLRLHLAKQF 62 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~----~gg~w~~~~--------------------~~~~~~~~~~~~ 62 (303)
.+||+|||||++|+++|..|++.|++|+|+|+.+. .|......+ ............
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 84 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGKEI 84 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETTEE
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCCee
Confidence 47999999999999999999999999999999862 232211100 001111111111
Q ss_pred c--cCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeC
Q 022090 63 C--QLPHLPF-PSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGR 139 (303)
Q Consensus 63 ~--~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad 139 (303)
. .+..... ........++..+...+.+.+++.|++. +++++|++++.++ +.+.+.+...++ +..+ +++|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i--~~~~~v~~i~~~~--~~~~v~v~~~~g---~~~~-~~a~ 156 (421)
T 3nix_A 85 ADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDV--EYEVGVTDIKFFG--TDSVTTIEDING---NKRE-IEAR 156 (421)
T ss_dssp EEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEE--ECSEEEEEEEEET--TEEEEEEEETTS---CEEE-EEEE
T ss_pred EEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEE--EcCCEEEEEEEeC--CEEEEEEEcCCC---CEEE-EEcC
Confidence 1 1111000 0111223678899999999998888665 9999999998876 445454433221 2247 8999
Q ss_pred EEEEccCCCC
Q 022090 140 FLVVASGETT 149 (303)
Q Consensus 140 ~vIlAtG~~~ 149 (303)
.||.|+|.++
T Consensus 157 ~vV~A~G~~s 166 (421)
T 3nix_A 157 FIIDASGYGR 166 (421)
T ss_dssp EEEECCGGGC
T ss_pred EEEECCCCch
Confidence 9999999655
No 101
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.34 E-value=8.1e-12 Score=114.71 Aligned_cols=137 Identities=19% Similarity=0.199 Sum_probs=89.0
Q ss_pred CCCCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCc--------------CCCCceEEecCcccccCCC--
Q 022090 4 QAAGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK--------------YSYDRLRLHLAKQFCQLPH-- 67 (303)
Q Consensus 4 ~~~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~--------------~~~~~~~~~~~~~~~~~~~-- 67 (303)
.+..+||+|||||++|+++|..|++.|++|+|+|+.+..+..-+. ...+.+..........+..
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~ 87 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLP 87 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEE
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhcccccccccccee
Confidence 345689999999999999999999999999999998754321000 0010000000000000000
Q ss_pred CC---CCCCC--CCCCCHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEE
Q 022090 68 LP---FPSSY--PMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLV 142 (303)
Q Consensus 68 ~~---~~~~~--~~~~~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vI 142 (303)
+. .+..+ ....++..+.+.|.+.+++.++++ +++++|++++.++ +.++|++.++.+ ..+ +++|+||
T Consensus 88 ~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v--~~~~~v~~i~~~~--~~v~v~~~~~~g----~~~-~~a~~vV 158 (500)
T 2qa1_A 88 IDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADI--RRGHEVLSLTDDG--AGVTVEVRGPEG----KHT-LRAAYLV 158 (500)
T ss_dssp EEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEE--EETCEEEEEEEET--TEEEEEEEETTE----EEE-EEESEEE
T ss_pred cccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEE--ECCcEEEEEEEcC--CeEEEEEEcCCC----CEE-EEeCEEE
Confidence 00 00011 122457889999999998887655 9999999998876 567888776421 147 8999999
Q ss_pred EccCCCC
Q 022090 143 VASGETT 149 (303)
Q Consensus 143 lAtG~~~ 149 (303)
.|+|.+|
T Consensus 159 gADG~~S 165 (500)
T 2qa1_A 159 GCDGGRS 165 (500)
T ss_dssp ECCCTTC
T ss_pred ECCCcch
Confidence 9999876
No 102
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.34 E-value=3.1e-12 Score=114.47 Aligned_cols=131 Identities=22% Similarity=0.299 Sum_probs=85.9
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCc-------------------cCc-----CCCCceEEecCc-
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASI-------------------WKK-----YSYDRLRLHLAK- 60 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~-------------------w~~-----~~~~~~~~~~~~- 60 (303)
.++||+|||||++|+++|..|+++|++|+|+|+.+..... |.. .....+......
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 101 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFRS 101 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEETTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEECCC
Confidence 3589999999999999999999999999999998754311 000 011122221111
Q ss_pred --ccccCCCCCCC---CCCCCCCCHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEE
Q 022090 61 --QFCQLPHLPFP---SSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEY 135 (303)
Q Consensus 61 --~~~~~~~~~~~---~~~~~~~~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~ 135 (303)
....++..... .......++..+.+.|.+.+.. ..++++++|++++.++ +.++|++.++ .+
T Consensus 102 g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~----~~i~~~~~v~~i~~~~--~~v~v~~~~g-------~~- 167 (407)
T 3rp8_A 102 GENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR----DSVQFGKRVTRCEEDA--DGVTVWFTDG-------SS- 167 (407)
T ss_dssp CCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG----GGEEESCCEEEEEEET--TEEEEEETTS-------CE-
T ss_pred CCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc----CEEEECCEEEEEEecC--CcEEEEEcCC-------CE-
Confidence 00111100000 0112234678888888888765 3459999999999876 5688888765 46
Q ss_pred EeeCEEEEccCCCCC
Q 022090 136 YSGRFLVVASGETTN 150 (303)
Q Consensus 136 ~~ad~vIlAtG~~~~ 150 (303)
+.+|.||.|+|.+|.
T Consensus 168 ~~a~~vV~AdG~~S~ 182 (407)
T 3rp8_A 168 ASGDLLIAADGSHSA 182 (407)
T ss_dssp EEESEEEECCCTTCS
T ss_pred EeeCEEEECCCcChH
Confidence 899999999998664
No 103
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.34 E-value=4.1e-12 Score=104.91 Aligned_cols=124 Identities=15% Similarity=0.075 Sum_probs=80.4
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
.+||+|||||++|+++|..|++.|.+|+++|+.....|.|........ ........+.+ ...+++..+..+
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~~~~--~~~~~~~~~~d-------~~g~~~~~~~~~ 73 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPF--PPGSLLERAYD-------PKDERVWAFHAR 73 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCCSCC--CTTCHHHHHCC-------TTCCCHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCcccccc--chhhHHhhhcc-------CCCCCHHHHHHH
Confidence 479999999999999999999999999999998433333321110000 00000000000 011156788888
Q ss_pred HHHHHHHc-CCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCC
Q 022090 87 LDHYVSHF-NIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNP 151 (303)
Q Consensus 87 l~~~~~~~-~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p 151 (303)
+.+.+++. ++.. + +++|+++..++ +..+.|.+.++ .+ +.+|.||+|+|.++..
T Consensus 74 l~~~~~~~~gv~i--~-~~~v~~i~~~~-~~v~~v~~~~g-------~~-i~a~~VV~A~G~~s~~ 127 (232)
T 2cul_A 74 AKYLLEGLRPLHL--F-QATATGLLLEG-NRVVGVRTWEG-------PP-ARGEKVVLAVGSFLGA 127 (232)
T ss_dssp HHHHHHTCTTEEE--E-ECCEEEEEEET-TEEEEEEETTS-------CC-EECSEEEECCTTCSSC
T ss_pred HHHHHHcCCCcEE--E-EeEEEEEEEeC-CEEEEEEECCC-------CE-EECCEEEECCCCChhh
Confidence 98888876 7653 5 57899998765 22345666543 46 8999999999975543
No 104
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.32 E-value=1.3e-12 Score=119.97 Aligned_cols=139 Identities=15% Similarity=0.101 Sum_probs=88.3
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceE-EecCccc-ccCCCCCCCCCCCCCCCHHHH
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLR-LHLAKQF-CQLPHLPFPSSYPMFVSRAQF 83 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~l 83 (303)
..+||+|||||++|+++|..|++.|++|+|+|+.+.+|+....+.++... ....... .....+. .......+..++
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~--~~~~~~~~~~~l 168 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFC--TGTLDHISIRQL 168 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTT--CTTCCEEEHHHH
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCcccccccc--ccccccCCHHHH
Confidence 46899999999999999999999999999999998776542111111000 0000000 0000000 000112356788
Q ss_pred HHHHHHHHHHcCCCceeEeCeEEEEEEEeC-CCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCC
Q 022090 84 IEHLDHYVSHFNIGPSIRYQRSVESASYDE-ATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNP 151 (303)
Q Consensus 84 ~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~-~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p 151 (303)
.+++.+.+++.++.+ +++++|+++..++ +.+.|.|.+.+..++ +..+ +.+|+||+|+|..+.+
T Consensus 169 ~~~L~~~~~~~gv~v--~~~~~v~~i~~~~~~~~~~~v~~~~~~~g--~~~~-i~ad~VV~A~G~~S~~ 232 (497)
T 2bry_A 169 QLLLLKVALLLGVEI--HWGVKFTGLQPPPRKGSGWRAQLQPNPPA--QLAS-YEFDVLISAAGGKFVP 232 (497)
T ss_dssp HHHHHHHHHHTTCEE--EESCEEEEEECCCSTTCCBEEEEESCCCH--HHHT-CCBSEEEECCCTTCCC
T ss_pred HHHHHHHHHhCCCEE--EeCCEEEEEEEecCCCCEEEEEEEECCCC--CEEE-EEcCEEEECCCCCccc
Confidence 899999888877655 9999999998752 234688877421000 1135 8999999999966544
No 105
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.32 E-value=2.1e-12 Score=112.93 Aligned_cols=128 Identities=16% Similarity=0.242 Sum_probs=82.3
Q ss_pred CcEEEECCcHHHHHHHHHHhh---CCCCeEEEecCCCCCCccCcCC---CCceEEecCcccccCCC--------------
Q 022090 8 VEVIMVGAGTSGLATAACLSL---QSIPYVILERENCYASIWKKYS---YDRLRLHLAKQFCQLPH-------------- 67 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~---~g~~v~iie~~~~~gg~w~~~~---~~~~~~~~~~~~~~~~~-------------- 67 (303)
+||+|||||++|+++|..|++ .|++|+|||+++..||.|.... +..........+.....
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~ 81 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDELL 81 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHHH
Confidence 589999999999999999999 8999999999999998665321 11112221111110000
Q ss_pred -----CCCC---------CCCCCCCCHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeE
Q 022090 68 -----LPFP---------SSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIE 133 (303)
Q Consensus 68 -----~~~~---------~~~~~~~~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~ 133 (303)
.+++ .....|.....+..+.+..++..+.+ |+++++|++++.++ +.|+|.+.++ .
T Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~--i~~~~~V~~i~~~~--~~~~v~~~~g-------~ 150 (342)
T 3qj4_A 82 AYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAE--VYFRHRVTQINLRD--DKWEVSKQTG-------S 150 (342)
T ss_dssp HTTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTCE--EESSCCEEEEEECS--SSEEEEESSS-------C
T ss_pred hCCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCCE--EEeCCEEEEEEEcC--CEEEEEECCC-------C
Confidence 0000 00111222223344455555555654 49999999999865 5699888764 4
Q ss_pred EEEeeCEEEEccCC
Q 022090 134 EYYSGRFLVVASGE 147 (303)
Q Consensus 134 ~~~~ad~vIlAtG~ 147 (303)
. +.||.||+|+..
T Consensus 151 ~-~~ad~vV~A~p~ 163 (342)
T 3qj4_A 151 P-EQFDLIVLTMPV 163 (342)
T ss_dssp C-EEESEEEECSCH
T ss_pred E-EEcCEEEECCCH
Confidence 5 789999999984
No 106
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.31 E-value=1.3e-11 Score=113.34 Aligned_cols=135 Identities=16% Similarity=0.132 Sum_probs=88.4
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCc--------------CCCCceE---EecCcccc--cCC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK--------------YSYDRLR---LHLAKQFC--QLP 66 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~--------------~~~~~~~---~~~~~~~~--~~~ 66 (303)
..+||+|||||++|+++|..|+++|++|+|+|+.+..+...+. ...+.+. ......+. .+.
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 90 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPVD 90 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceecc
Confidence 4679999999999999999999999999999998654321100 0010000 00000000 000
Q ss_pred CCCCCCCCC--CCCCHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEc
Q 022090 67 HLPFPSSYP--MFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVA 144 (303)
Q Consensus 67 ~~~~~~~~~--~~~~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlA 144 (303)
....+..++ ...++..+.+.|.+.+.+.++++ +++++|++++.++ +.++|++.++.+ + .+ +++|+||.|
T Consensus 91 ~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v--~~~~~v~~i~~~~--~~v~v~~~~~~g---~-~~-~~a~~vVgA 161 (499)
T 2qa2_A 91 FGVLEGAHYGVKAVPQSTTESVLEEWALGRGAEL--LRGHTVRALTDEG--DHVVVEVEGPDG---P-RS-LTTRYVVGC 161 (499)
T ss_dssp GGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEE--EESCEEEEEEECS--SCEEEEEECSSC---E-EE-EEEEEEEEC
T ss_pred cccCCCCCCceEecCHHHHHHHHHHHHHhCCCEE--EcCCEEEEEEEeC--CEEEEEEEcCCC---c-EE-EEeCEEEEc
Confidence 000011111 23467889999999998887655 9999999998876 457888776421 1 47 899999999
Q ss_pred cCCCC
Q 022090 145 SGETT 149 (303)
Q Consensus 145 tG~~~ 149 (303)
+|.+|
T Consensus 162 DG~~S 166 (499)
T 2qa2_A 162 DGGRS 166 (499)
T ss_dssp CCTTC
T ss_pred cCccc
Confidence 99876
No 107
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.30 E-value=1.1e-11 Score=107.79 Aligned_cols=129 Identities=13% Similarity=0.215 Sum_probs=77.9
Q ss_pred CcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCccccc-----------------------
Q 022090 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQ----------------------- 64 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~----------------------- 64 (303)
+||+|||||++|+++|..|++.|++|+|+|+.+..||.+..................
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAEWT 82 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEEEC
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeeecc
Confidence 699999999999999999999999999999998888765532222111111100000
Q ss_pred -----CC---CCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEE
Q 022090 65 -----LP---HLPFPSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYY 136 (303)
Q Consensus 65 -----~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~ 136 (303)
+. ..+.+.....+.....+....+..++ ++++ +++++|++++.++ +.|.|++.++. .. .
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--g~~i--~~~~~v~~i~~~~--~~~~v~~~~g~------~~-~ 149 (336)
T 1yvv_A 83 PLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMRG--DMPV--SFSCRITEVFRGE--EHWNLLDAEGQ------NH-G 149 (336)
T ss_dssp CCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHHT--TCCE--ECSCCEEEEEECS--SCEEEEETTSC------EE-E
T ss_pred ccceeccCcccccCCCCCccEEcCccHHHHHHHHHc--cCcE--EecCEEEEEEEeC--CEEEEEeCCCc------Cc-c
Confidence 00 00000000111111122222222222 5544 9999999998876 56888876641 23 3
Q ss_pred eeCEEEEccCCCC
Q 022090 137 SGRFLVVASGETT 149 (303)
Q Consensus 137 ~ad~vIlAtG~~~ 149 (303)
.+|+||+|+|..+
T Consensus 150 ~a~~vV~a~g~~~ 162 (336)
T 1yvv_A 150 PFSHVIIATPAPQ 162 (336)
T ss_dssp EESEEEECSCHHH
T ss_pred ccCEEEEcCCHHH
Confidence 5999999999644
No 108
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.30 E-value=1.9e-11 Score=113.23 Aligned_cols=137 Identities=17% Similarity=0.160 Sum_probs=89.3
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcC------------------------CCC---ce---E
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY------------------------SYD---RL---R 55 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~------------------------~~~---~~---~ 55 (303)
..+||+|||||++|+++|..|+++|++|+|+|+.+..+..-+.. ... .+ .
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 83 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIRL 83 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEEE
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeeeE
Confidence 35799999999999999999999999999999987543210000 000 00 0
Q ss_pred Eec--Ccccc----cCCC-----CCCCCCCCCCCCHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCC--eEEEEE
Q 022090 56 LHL--AKQFC----QLPH-----LPFPSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATN--MWNVKA 122 (303)
Q Consensus 56 ~~~--~~~~~----~~~~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~--~~~v~~ 122 (303)
... ...+. .+.. ...........++..+..+|.+.+++.+++. +++++|++++.+++.. .+++.+
T Consensus 84 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i--~~~~~v~~i~~~~~~~~~~v~v~~ 161 (535)
T 3ihg_A 84 AESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAI--RFGTRLLSFRQHDDDAGAGVTARL 161 (535)
T ss_dssp ESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEE--ESSCEEEEEEEECGGGCSEEEEEE
T ss_pred EeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEE--EeCCEEEEEEECCCCccccEEEEE
Confidence 000 00000 0000 0000011234578899999999998887655 9999999999876211 678877
Q ss_pred eecCCCCceeEEEEeeCEEEEccCCCC
Q 022090 123 SNLLSPGREIEEYYSGRFLVVASGETT 149 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~ad~vIlAtG~~~ 149 (303)
.++.+ ..+ +++|+||.|+|.+|
T Consensus 162 ~~~~~----~~~-i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 162 AGPDG----EYD-LRAGYLVGADGNRS 183 (535)
T ss_dssp EETTE----EEE-EEEEEEEECCCTTC
T ss_pred EcCCC----eEE-EEeCEEEECCCCcc
Confidence 76432 257 89999999999866
No 109
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.30 E-value=9.1e-12 Score=116.01 Aligned_cols=134 Identities=16% Similarity=0.126 Sum_probs=85.7
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcC--------------CCCce---EEecCcc-c------
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY--------------SYDRL---RLHLAKQ-F------ 62 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~--------------~~~~~---~~~~~~~-~------ 62 (303)
.+||+|||||++|+++|..|++.|++|+|||+.+......+.. .++.+ ....... +
T Consensus 49 ~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 128 (570)
T 3fmw_A 49 TTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFTQ 128 (570)
T ss_dssp --CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCTT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCcccc
Confidence 4799999999999999999999999999999987543111000 00000 0000000 0
Q ss_pred -ccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEE
Q 022090 63 -CQLPHLPFPSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFL 141 (303)
Q Consensus 63 -~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~v 141 (303)
..+.....+.......++..+...|.+.+++.++++ +++++|++++.++ +.++|++.+.++ + .+ +++|+|
T Consensus 129 ~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i--~~~~~v~~l~~~~--~~v~v~~~~~~G---~-~~-~~a~~v 199 (570)
T 3fmw_A 129 GLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEI--PRGHEVTRLRQDA--EAVEVTVAGPSG---P-YP-VRARYG 199 (570)
T ss_dssp CCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEEC--CBSCEEEECCBCS--SCEEEEEEETTE---E-EE-EEESEE
T ss_pred cccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEE--EeCCEEEEEEEcC--CeEEEEEEeCCC---c-EE-EEeCEE
Confidence 000011111111234678899999999988877655 8999999998765 567787743211 1 47 899999
Q ss_pred EEccCCCC
Q 022090 142 VVASGETT 149 (303)
Q Consensus 142 IlAtG~~~ 149 (303)
|.|+|.+|
T Consensus 200 V~ADG~~S 207 (570)
T 3fmw_A 200 VGCDGGRS 207 (570)
T ss_dssp EECSCSSC
T ss_pred EEcCCCCc
Confidence 99999766
No 110
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.29 E-value=3.9e-11 Score=112.15 Aligned_cols=138 Identities=14% Similarity=0.196 Sum_probs=87.5
Q ss_pred CCcEEEECCcHHHHHHHHHHhhC------CCCeEEEecCCCCCCccCcC--------------------CCC------ce
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQ------SIPYVILERENCYASIWKKY--------------------SYD------RL 54 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~------g~~v~iie~~~~~gg~w~~~--------------------~~~------~~ 54 (303)
.+||+|||||++|+++|..|++. |++|+|+|+.+.+|+..... ... .+
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~~~~~~ 114 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDRF 114 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCEEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeeeechhhe
Confidence 47999999999999999999999 99999999987766421100 000 01
Q ss_pred EEecCcccccCCCCCC---CCCCCCCCCHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeec---CCC
Q 022090 55 RLHLAKQFCQLPHLPF---PSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNL---LSP 128 (303)
Q Consensus 55 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~---~~~ 128 (303)
..........++..+. ........++..+..+|.+.+++.++++ ++++.|+++..++++..+.|.+.+. .++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i--~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G 192 (584)
T 2gmh_A 115 GILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEV--YPGYAAAEILFHEDGSVKGIATNDVGIQKDG 192 (584)
T ss_dssp EEECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEE--ETTCCEEEEEECTTSSEEEEEECCEEECTTS
T ss_pred eeeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEE--EcCCEEEEEEEcCCCCEEEEEeCCccccCCC
Confidence 0101100111111110 0011123478899999999998888665 9999999998865333334666520 011
Q ss_pred Ccee-------EEEEeeCEEEEccCCCC
Q 022090 129 GREI-------EEYYSGRFLVVASGETT 149 (303)
Q Consensus 129 ~~~~-------~~~~~ad~vIlAtG~~~ 149 (303)
+. .+ +.+|.||+|+|.++
T Consensus 193 --~~~~~~~~g~~-i~Ad~VV~AdG~~S 217 (584)
T 2gmh_A 193 --APKTTFERGLE-LHAKVTIFAEGCHG 217 (584)
T ss_dssp --CEEEEEECCCE-EECSEEEECCCTTC
T ss_pred --CcccccCCceE-EECCEEEEeeCCCc
Confidence 11 46 89999999999866
No 111
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.29 E-value=1.5e-11 Score=109.72 Aligned_cols=130 Identities=15% Similarity=0.188 Sum_probs=82.6
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCC-----CCccCcCCCCce---------------------EEecC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCY-----ASIWKKYSYDRL---------------------RLHLA 59 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~-----gg~w~~~~~~~~---------------------~~~~~ 59 (303)
..+||+|||||++|+++|..|++.|++|+|+|+.+.. |+.|........ .....
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~ 104 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNIADE 104 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEEECS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEEECC
Confidence 3579999999999999999999999999999998643 322221100000 00000
Q ss_pred c--ccccCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEE
Q 022090 60 K--QFCQLPHLPFP-SSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYY 136 (303)
Q Consensus 60 ~--~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~ 136 (303)
. ...... .+.. .......++..+.++|.+.+.. ..++++++|++++.++ +.|+|++.++ .+ +
T Consensus 105 ~g~~~~~~~-~~~~~~~~~~~i~r~~l~~~L~~~~~~----~~i~~~~~v~~i~~~~--~~v~v~~~~g-------~~-~ 169 (398)
T 2xdo_A 105 KGNILSTKN-VKPENRFDNPEINRNDLRAILLNSLEN----DTVIWDRKLVMLEPGK--KKWTLTFENK-------PS-E 169 (398)
T ss_dssp SSEEEEECC-CGGGTTSSCCEECHHHHHHHHHHTSCT----TSEEESCCEEEEEECS--SSEEEEETTS-------CC-E
T ss_pred CCCchhhcc-ccccCCCCCceECHHHHHHHHHhhcCC----CEEEECCEEEEEEECC--CEEEEEECCC-------cE-E
Confidence 0 000000 0000 0011134677787777765532 3458999999998866 5688888764 46 8
Q ss_pred eeCEEEEccCCCCC
Q 022090 137 SGRFLVVASGETTN 150 (303)
Q Consensus 137 ~ad~vIlAtG~~~~ 150 (303)
++|.||.|+|.+|.
T Consensus 170 ~ad~vV~AdG~~S~ 183 (398)
T 2xdo_A 170 TADLVILANGGMSK 183 (398)
T ss_dssp EESEEEECSCTTCS
T ss_pred ecCEEEECCCcchh
Confidence 99999999998764
No 112
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.28 E-value=7.5e-12 Score=110.94 Aligned_cols=126 Identities=12% Similarity=0.099 Sum_probs=83.4
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCc------------------------CCCCceEEecCccc
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK------------------------YSYDRLRLHLAKQF 62 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~------------------------~~~~~~~~~~~~~~ 62 (303)
.+||+|||||++|+++|..|++.|++|+|+|+.+..++.-.. .....+........
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~~ 90 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNKS 90 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETTEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCCce
Confidence 579999999999999999999999999999998765421000 00011111110000
Q ss_pred ccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEE
Q 022090 63 CQLPHLPFPSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLV 142 (303)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vI 142 (303)
+..++.+.......++..+.+++.+.+.+.++++ +++++|++++. + + .|++.++ .+ +++|.||
T Consensus 91 --~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i--~~~~~v~~i~~-~--~--~v~~~~g-------~~-~~ad~vV 153 (379)
T 3alj_A 91 --VSKETFNGLPWRIMTRSHLHDALVNRARALGVDI--SVNSEAVAADP-V--G--RLTLQTG-------EV-LEADLIV 153 (379)
T ss_dssp --EEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEE--ESSCCEEEEET-T--T--EEEETTS-------CE-EECSEEE
T ss_pred --eeeccCCCCceEEECHHHHHHHHHHHHHhcCCEE--EeCCEEEEEEe-C--C--EEEECCC-------CE-EEcCEEE
Confidence 0000000000123467899999999988877655 99999999976 2 3 6777654 46 8999999
Q ss_pred EccCCCC
Q 022090 143 VASGETT 149 (303)
Q Consensus 143 lAtG~~~ 149 (303)
.|+|.++
T Consensus 154 ~AdG~~s 160 (379)
T 3alj_A 154 GADGVGS 160 (379)
T ss_dssp ECCCTTC
T ss_pred ECCCccH
Confidence 9999765
No 113
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.28 E-value=3.4e-11 Score=110.98 Aligned_cols=142 Identities=20% Similarity=0.263 Sum_probs=86.1
Q ss_pred CCCCCCCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCC----CCCccCcC------------------CCCce---E
Q 022090 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQSIPYVILERENC----YASIWKKY------------------SYDRL---R 55 (303)
Q Consensus 1 M~~~~~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~----~gg~w~~~------------------~~~~~---~ 55 (303)
|+.....+||+|||||++|+++|..|++.|++|+|+|+.+. .|..+... .+... .
T Consensus 1 M~~~~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~ 80 (512)
T 3e1t_A 1 MSTRPEVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGT 80 (512)
T ss_dssp ----CEEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEE
T ss_pred CCCCCccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCce
Confidence 54444458999999999999999999999999999999872 22211100 00000 0
Q ss_pred EecCcc----cccCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeE-EEEEeecCCCC
Q 022090 56 LHLAKQ----FCQLPHLPF-PSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMW-NVKASNLLSPG 129 (303)
Q Consensus 56 ~~~~~~----~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~-~v~~~~~~~~~ 129 (303)
...... ...+...+. ........++..+..+|.+.+++.++.+ +++++|+++..++ +.. .|.+...++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i--~~~~~V~~v~~~~--~~v~gv~~~~~dG-- 154 (512)
T 3e1t_A 81 FRWGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDV--RERHEVIDVLFEG--ERAVGVRYRNTEG-- 154 (512)
T ss_dssp EECSSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEE--ESSCEEEEEEEET--TEEEEEEEECSSS--
T ss_pred EEecCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEE--EcCCEEEEEEEEC--CEEEEEEEEeCCC--
Confidence 000000 000111100 0111123578899999999998888655 9999999998865 332 244443211
Q ss_pred ceeEEEEeeCEEEEccCCCCC
Q 022090 130 REIEEYYSGRFLVVASGETTN 150 (303)
Q Consensus 130 ~~~~~~~~ad~vIlAtG~~~~ 150 (303)
+..+ +.+|.||.|+|.++.
T Consensus 155 -~~~~-i~ad~VI~AdG~~S~ 173 (512)
T 3e1t_A 155 -VELM-AHARFIVDASGNRTR 173 (512)
T ss_dssp -CEEE-EEEEEEEECCCTTCS
T ss_pred -CEEE-EEcCEEEECCCcchH
Confidence 2247 899999999997663
No 114
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.28 E-value=1.1e-11 Score=115.07 Aligned_cols=169 Identities=12% Similarity=0.058 Sum_probs=105.7
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC-CCCCccCcCCCCceEEec-----------Ccc--------cccC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN-CYASIWKKYSYDRLRLHL-----------AKQ--------FCQL 65 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~-~~gg~w~~~~~~~~~~~~-----------~~~--------~~~~ 65 (303)
..+||+|||||++|++||..|++.|.+|+|+|++. .+|.. .+.+...... ... ...+
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~---~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f 102 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQM---SCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQF 102 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCC---CSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCc---CccccccccchHHHHHHHHHhhhHHHHHhhhcccce
Confidence 35899999999999999999999999999999974 34421 1111110000 000 0000
Q ss_pred CCCC---CCCCC--CCCCCHHHHHHHHHHHHHHc-CCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeC
Q 022090 66 PHLP---FPSSY--PMFVSRAQFIEHLDHYVSHF-NIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGR 139 (303)
Q Consensus 66 ~~~~---~~~~~--~~~~~~~~l~~~l~~~~~~~-~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad 139 (303)
.... -+..+ ....++..+...+.+.++.. ++.. ++++|+++..++ +..+.|.+.++ .. +.|+
T Consensus 103 ~~l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI---~~~~Vt~L~~e~-g~V~GV~t~dG-------~~-i~Ad 170 (637)
T 2zxi_A 103 KMLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYI---KQEEVVDIIVKN-NQVVGVRTNLG-------VE-YKTK 170 (637)
T ss_dssp EEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEE---EESCEEEEEESS-SBEEEEEETTS-------CE-EECS
T ss_pred eecccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEE---EEeEEEEEEecC-CEEEEEEECCC-------cE-EEeC
Confidence 0000 00000 01235677888888888774 6542 567899987754 23345666553 57 8999
Q ss_pred EEEEccCCCCCCCCCCCCCccccccCCCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEee
Q 022090 140 FLVVASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVR 217 (303)
Q Consensus 140 ~vIlAtG~~~~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r 217 (303)
.||+|||. .+..+.++|...+ . +.+ +| +.++.+++..|.+.|.+++.+.+
T Consensus 171 aVVLATG~--~s~~~~~~G~~~~------~----------------~Gr---~G-~~~A~~la~~L~~lG~~v~~l~t 220 (637)
T 2zxi_A 171 AVVVTTGT--FLNGVIYIGDKMI------P----------------GGR---LG-EPRSEGLSDFYRRFDFPLIRFKT 220 (637)
T ss_dssp EEEECCTT--CBTCEEEETTEEE------E----------------CSB---TT-BCCBCTHHHHHHHTTCCCEEEEE
T ss_pred EEEEccCC--CccCceeccceec------C----------------CCC---CC-chhHHHHHHHHHhcCCceEEecC
Confidence 99999994 4444556665543 1 112 23 57889999999999999877754
No 115
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.25 E-value=3.8e-11 Score=108.41 Aligned_cols=60 Identities=5% Similarity=0.037 Sum_probs=47.9
Q ss_pred CHHHHHHHHHHHHHHcCCCceeEeCe---EEEEEEEeCCCCeEE-EEEeecCCCCceeEEEEeeCEEEEccCCCCC
Q 022090 79 SRAQFIEHLDHYVSHFNIGPSIRYQR---SVESASYDEATNMWN-VKASNLLSPGREIEEYYSGRFLVVASGETTN 150 (303)
Q Consensus 79 ~~~~l~~~l~~~~~~~~l~~~i~~~~---~V~~i~~~~~~~~~~-v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~ 150 (303)
+...+...+.+.+++.|+.+ ++++ +|+++..++ +.+. |.+.++ .+ +.||.||+|+|.++.
T Consensus 159 ~~~~~~~~L~~~a~~~Gv~i--~~~t~~~~V~~i~~~~--~~v~gV~t~~G-------~~-i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 159 HARNALVAAAREAQRMGVKF--VTGTPQGRVVTLIFEN--NDVKGAVTADG-------KI-WRAERTFLCAGASAG 222 (438)
T ss_dssp CHHHHHHHHHHHHHHTTCEE--EESTTTTCEEEEEEET--TEEEEEEETTT-------EE-EECSEEEECCGGGGG
T ss_pred cHHHHHHHHHHHHHhcCCEE--EeCCcCceEEEEEecC--CeEEEEEECCC-------CE-EECCEEEECCCCChh
Confidence 35678888888888888665 8998 999998865 5676 777654 57 899999999997654
No 116
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.25 E-value=8.6e-11 Score=109.17 Aligned_cols=134 Identities=14% Similarity=0.208 Sum_probs=86.2
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcC------------------------CCC---c-eEEec
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY------------------------SYD---R-LRLHL 58 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~------------------------~~~---~-~~~~~ 58 (303)
.+||+|||||++|+++|..|++.|++|+|+|+.+..+...+.. ... . .....
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 105 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVTR 105 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEecc
Confidence 4699999999999999999999999999999987654221110 000 0 11110
Q ss_pred --CcccccCCC--CCC------CCCCCCCCCHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCC
Q 022090 59 --AKQFCQLPH--LPF------PSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSP 128 (303)
Q Consensus 59 --~~~~~~~~~--~~~------~~~~~~~~~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~ 128 (303)
...+..+.. ... ........++..+.++|.+.+++. ++++++|++++.++ +.+++++.+..++
T Consensus 106 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~-----v~~~~~v~~~~~~~--~~v~v~~~~~~~G 178 (549)
T 2r0c_A 106 VGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER-----LRTRSRLDSFEQRD--DHVRATITDLRTG 178 (549)
T ss_dssp BTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG-----EECSEEEEEEEECS--SCEEEEEEETTTC
T ss_pred CCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh-----cccCcEEEEEEEeC--CEEEEEEEECCCC
Confidence 001111110 000 000112346778888888888765 59999999998866 5578877762221
Q ss_pred CceeEEEEeeCEEEEccCCCCC
Q 022090 129 GREIEEYYSGRFLVVASGETTN 150 (303)
Q Consensus 129 ~~~~~~~~~ad~vIlAtG~~~~ 150 (303)
+..+ +++|+||.|+|.+|.
T Consensus 179 --~~~~-i~a~~vVgADG~~S~ 197 (549)
T 2r0c_A 179 --ATRA-VHARYLVACDGASSP 197 (549)
T ss_dssp --CEEE-EEEEEEEECCCTTCH
T ss_pred --CEEE-EEeCEEEECCCCCcH
Confidence 2357 899999999998763
No 117
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.25 E-value=9.4e-11 Score=110.79 Aligned_cols=141 Identities=18% Similarity=0.226 Sum_probs=89.6
Q ss_pred CCCcEEEECCcHHHHHHHHHHhh-CCCCeEEEecCCCCCCccCcC--------------C----------CCceEEecC-
Q 022090 6 AGVEVIMVGAGTSGLATAACLSL-QSIPYVILERENCYASIWKKY--------------S----------YDRLRLHLA- 59 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~-~g~~v~iie~~~~~gg~w~~~--------------~----------~~~~~~~~~- 59 (303)
..+||+|||||++|+++|..|++ .|++|+|+|+.+..+...+.. . ...+....+
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~ 110 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPD 110 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEEC
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCC
Confidence 45799999999999999999999 999999999987544221110 0 011111110
Q ss_pred ----cccc---cCCCCCCC--CCCCCCCCHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCC--CCeEEEEEee----
Q 022090 60 ----KQFC---QLPHLPFP--SSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEA--TNMWNVKASN---- 124 (303)
Q Consensus 60 ----~~~~---~~~~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~--~~~~~v~~~~---- 124 (303)
..+. .++..... .......++..+.++|.+.+.+.+....++++++|++++.+++ ...++|++.+
T Consensus 111 ~~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~ 190 (639)
T 2dkh_A 111 PGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAA 190 (639)
T ss_dssp TTSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGG
T ss_pred CCCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEecccc
Confidence 0000 00000000 0011235688999999999998876223499999999988752 2357777764
Q ss_pred cCCCCceeEEEEeeCEEEEccCCCCC
Q 022090 125 LLSPGREIEEYYSGRFLVVASGETTN 150 (303)
Q Consensus 125 ~~~~~~~~~~~~~ad~vIlAtG~~~~ 150 (303)
..+ +..+ +++|+||.|+|.+|.
T Consensus 191 ~~G---~~~~-i~a~~vVgADG~~S~ 212 (639)
T 2dkh_A 191 HAG---QIET-VQARYVVGCDGARSN 212 (639)
T ss_dssp GTT---CEEE-EEEEEEEECCCTTCH
T ss_pred CCC---CeEE-EEeCEEEECCCcchH
Confidence 111 2257 899999999998763
No 118
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.24 E-value=1.6e-11 Score=111.33 Aligned_cols=134 Identities=17% Similarity=0.239 Sum_probs=85.9
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcC--CCCceEEe-c----------Cccc-----ccCC--
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY--SYDRLRLH-L----------AKQF-----CQLP-- 66 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~--~~~~~~~~-~----------~~~~-----~~~~-- 66 (303)
.+||+|||||++|+++|..|++.|.+|+|+|+.+..|+..... ....+... . ...+ ..+.
T Consensus 26 ~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (447)
T 2i0z_A 26 HYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNNE 105 (447)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCHH
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCHH
Confidence 4799999999999999999999999999999988766421100 00000000 0 0000 0000
Q ss_pred ---------CCCCC--C---CCCCCCCHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCcee
Q 022090 67 ---------HLPFP--S---SYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREI 132 (303)
Q Consensus 67 ---------~~~~~--~---~~~~~~~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~ 132 (303)
..++. . .++.......+.+.+.+.+++.+++. +++++|+++..++ +..|.|.+.++
T Consensus 106 ~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i--~~~~~V~~i~~~~-~~v~~V~~~~G------- 175 (447)
T 2i0z_A 106 DIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKI--RTNTPVETIEYEN-GQTKAVILQTG------- 175 (447)
T ss_dssp HHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEE--ECSCCEEEEEEET-TEEEEEEETTC-------
T ss_pred HHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEE--EeCcEEEEEEecC-CcEEEEEECCC-------
Confidence 00000 0 00111145788888888888888655 9999999998764 22377877653
Q ss_pred EEEEeeCEEEEccCCCCCC
Q 022090 133 EEYYSGRFLVVASGETTNP 151 (303)
Q Consensus 133 ~~~~~ad~vIlAtG~~~~p 151 (303)
.+ +.+|.||+|||.++.|
T Consensus 176 ~~-i~Ad~VVlAtGg~s~~ 193 (447)
T 2i0z_A 176 EV-LETNHVVIAVGGKSVP 193 (447)
T ss_dssp CE-EECSCEEECCCCSSSG
T ss_pred CE-EECCEEEECCCCCcCC
Confidence 46 8999999999987643
No 119
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.23 E-value=5.8e-11 Score=110.90 Aligned_cols=135 Identities=15% Similarity=0.132 Sum_probs=87.2
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCC------------------ccCc---CCC---CceEEecCcc-
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYAS------------------IWKK---YSY---DRLRLHLAKQ- 61 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg------------------~w~~---~~~---~~~~~~~~~~- 61 (303)
.+||+|||||++|+++|..|++.|++|+|+|+.+..+. .|.. ..+ ..........
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 102 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWGQDQ 102 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECSSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEecCCC
Confidence 57999999999999999999999999999999854321 1100 000 0000000000
Q ss_pred ---cccCCCCC---CCCCCCCCCCHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEE
Q 022090 62 ---FCQLPHLP---FPSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEY 135 (303)
Q Consensus 62 ---~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~ 135 (303)
...+.... +........++..+...|.+.+++.|+.. +++++|+++..++ +..+.|.+.+++ +..+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i--~~g~~V~~v~~~~-g~~~~V~~~~~G----~~~~- 174 (591)
T 3i3l_A 103 APWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITV--HEETPVTDVDLSD-PDRVVLTVRRGG----ESVT- 174 (591)
T ss_dssp CCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEE--ETTCCEEEEECCS-TTCEEEEEEETT----EEEE-
T ss_pred ccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEE--EeCCEEEEEEEcC-CCEEEEEEecCC----ceEE-
Confidence 00011000 00111123578899999999998888665 8999999998753 356888887421 3357
Q ss_pred EeeCEEEEccCCCC
Q 022090 136 YSGRFLVVASGETT 149 (303)
Q Consensus 136 ~~ad~vIlAtG~~~ 149 (303)
+.+|.||.|+|.++
T Consensus 175 i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 175 VESDFVIDAGGSGG 188 (591)
T ss_dssp EEESEEEECCGGGC
T ss_pred EEcCEEEECCCCcc
Confidence 89999999999755
No 120
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.22 E-value=8.7e-11 Score=99.95 Aligned_cols=136 Identities=15% Similarity=0.174 Sum_probs=80.9
Q ss_pred CCcEEEECCcHHHHHHHHHHhhC-CCCeEEEecCCCCCC-ccCcC-CCCceEEecCc-ccccCCCCCCCCCCCC--CCCH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQ-SIPYVILERENCYAS-IWKKY-SYDRLRLHLAK-QFCQLPHLPFPSSYPM--FVSR 80 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~-g~~v~iie~~~~~gg-~w~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~ 80 (303)
.+||+|||||++|+++|..|++. |.+|+|+|+.+.+|+ .|... .+..+....+. .+..-...++...... ..+.
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 118 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHA 118 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCH
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCH
Confidence 46999999999999999999997 999999999987765 45322 12222221110 0000000111100000 1145
Q ss_pred HHHHHHHHHHHHH-cCCCceeEeCeEEEEEEEeCCCCeEEEEEee---------cCCCCceeEEEEeeCEEEEccCCC
Q 022090 81 AQFIEHLDHYVSH-FNIGPSIRYQRSVESASYDEATNMWNVKASN---------LLSPGREIEEYYSGRFLVVASGET 148 (303)
Q Consensus 81 ~~l~~~l~~~~~~-~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~---------~~~~~~~~~~~~~ad~vIlAtG~~ 148 (303)
.++...+.+.+.+ .+++. +++++|+++..++ .....|.+.. +..+ +... +.+|.||+|+|..
T Consensus 119 ~~~~~~l~~~~~~~~gv~i--~~~~~V~~i~~~~-~~v~gv~~~~~~~~~~~~~g~~g--~~~~-i~ad~VV~AtG~~ 190 (284)
T 1rp0_A 119 ALFTSTIMSKLLARPNVKL--FNAVAAEDLIVKG-NRVGGVVTNWALVAQNHHTQSCM--DPNV-MEAKIVVSSCGHD 190 (284)
T ss_dssp HHHHHHHHHHHHTSTTEEE--EETEEEEEEEEET-TEEEEEEEEEHHHHTCTTTSSCC--CCEE-EEEEEEEECCCSS
T ss_pred HHHHHHHHHHHHhcCCCEE--EcCcEEEEEEecC-CeEEEEEEeccccccccCccccC--ceEE-EECCEEEECCCCc
Confidence 6677777666654 46544 8999999998765 1222344431 1001 2257 8999999999953
No 121
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.22 E-value=7e-11 Score=105.35 Aligned_cols=126 Identities=16% Similarity=0.099 Sum_probs=80.7
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCC----CC-ccCc----------CCC--------CceEEecC--c
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCY----AS-IWKK----------YSY--------DRLRLHLA--K 60 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~----gg-~w~~----------~~~--------~~~~~~~~--~ 60 (303)
..+||+|||||++|+++|..|++.|++|+|+|+.+.. |+ .+.. ... ........ .
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g 83 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVDALTG 83 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEETTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEecCCC
Confidence 4579999999999999999999999999999998653 11 1000 000 00000000 0
Q ss_pred ccccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCE
Q 022090 61 QFCQLPHLPFPSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRF 140 (303)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~ 140 (303)
... ...+.+ .....+..+.+.+.+.+ .++. ++++++|++++.++ +.++|++.++ .+ +.+|.
T Consensus 84 ~~~--~~~~~~---~~~~~~~~l~~~L~~~~--~~~~--i~~~~~v~~i~~~~--~~v~v~~~~g-------~~-~~ad~ 144 (397)
T 2vou_A 84 ERV--GSVPAD---WRFTSYDSIYGGLYELF--GPER--YHTSKCLVGLSQDS--ETVQMRFSDG-------TK-AEANW 144 (397)
T ss_dssp CEE--EEEECC---CCEEEHHHHHHHHHHHH--CSTT--EETTCCEEEEEECS--SCEEEEETTS-------CE-EEESE
T ss_pred Ccc--ccccCc---ccccCHHHHHHHHHHhC--CCcE--EEcCCEEEEEEecC--CEEEEEECCC-------CE-EECCE
Confidence 000 000000 11234567777776664 2444 49999999998865 5688888764 46 89999
Q ss_pred EEEccCCCCC
Q 022090 141 LVVASGETTN 150 (303)
Q Consensus 141 vIlAtG~~~~ 150 (303)
||.|+|.+|.
T Consensus 145 vV~AdG~~S~ 154 (397)
T 2vou_A 145 VIGADGGASV 154 (397)
T ss_dssp EEECCCTTCH
T ss_pred EEECCCcchh
Confidence 9999998664
No 122
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.22 E-value=1.2e-10 Score=107.31 Aligned_cols=132 Identities=21% Similarity=0.319 Sum_probs=82.8
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCC-------CccCcCCCCc---eEEe--------cCcccccCC--
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYA-------SIWKKYSYDR---LRLH--------LAKQFCQLP-- 66 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~g-------g~w~~~~~~~---~~~~--------~~~~~~~~~-- 66 (303)
.+||+|||||++|+++|..|++.|++|+|+|+.+.++ +.|....+.. .... .......+.
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~~ 186 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP 186 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEeccc
Confidence 4799999999999999999999999999999987552 2232210000 0000 000000000
Q ss_pred ------------CCCCCC--CCCCCC-----CHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCC
Q 022090 67 ------------HLPFPS--SYPMFV-----SRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLS 127 (303)
Q Consensus 67 ------------~~~~~~--~~~~~~-----~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~ 127 (303)
.+..+. .+...+ ....+.+.+.+.+++.++++ +++++|+++..++ +..+.|.+.++
T Consensus 187 ~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I--~~~t~V~~I~~~~-~~v~gV~l~~G-- 261 (549)
T 3nlc_A 187 NFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEI--RFSTRVDDLHMED-GQITGVTLSNG-- 261 (549)
T ss_dssp TCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEE--ESSCCEEEEEESS-SBEEEEEETTS--
T ss_pred cccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEE--EeCCEEEEEEEeC-CEEEEEEECCC--
Confidence 000000 000011 13567778888888888665 9999999998765 23455777654
Q ss_pred CCceeEEEEeeCEEEEccCCCC
Q 022090 128 PGREIEEYYSGRFLVVASGETT 149 (303)
Q Consensus 128 ~~~~~~~~~~ad~vIlAtG~~~ 149 (303)
.+ +.||.||+|+|.++
T Consensus 262 -----~~-i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 262 -----EE-IKSRHVVLAVGHSA 277 (549)
T ss_dssp -----CE-EECSCEEECCCTTC
T ss_pred -----CE-EECCEEEECCCCCh
Confidence 57 89999999999765
No 123
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.21 E-value=1.3e-13 Score=124.32 Aligned_cols=114 Identities=21% Similarity=0.269 Sum_probs=69.3
Q ss_pred CcEEEECCcHHHHHHHHHHhhCC--CCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHH
Q 022090 8 VEVIMVGAGTSGLATAACLSLQS--IPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~g--~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 85 (303)
++|+|||||++|+++|..|++.+ .+|+|||+++... |.......... ..+.+++..
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~-------~~p~l~~v~~g---------------~~~~~~i~~ 60 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFG-------FTPAFPHLAMG---------------WRKFEDISV 60 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEE-------CGGGHHHHHHT---------------CSCGGGSEE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCc-------cCccHHHHhcC---------------CCCHHHhhh
Confidence 48999999999999999999875 7899999987421 10000000000 000001111
Q ss_pred HHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCCCccc
Q 022090 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCS 161 (303)
Q Consensus 86 ~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~g~~~ 161 (303)
.+.+.+++.+++ ....+|++|+.+. .+|++.++ ++ +.||+||+||| +.+. +++||.+.
T Consensus 61 ~~~~~~~~~gv~---~i~~~v~~Id~~~----~~V~~~~g-------~~-i~YD~LViAtG--~~~~-~~i~G~~e 118 (430)
T 3hyw_A 61 PLAPLLPKFNIE---FINEKAESIDPDA----NTVTTQSG-------KK-IEYDYLVIATG--PKLV-FGAEGQEE 118 (430)
T ss_dssp ESTTTGGGGTEE---EECSCEEEEETTT----TEEEETTC-------CE-EECSEEEECCC--CEEE-CCSBTHHH
T ss_pred cHHHHHHHCCcE---EEEeEEEEEECCC----CEEEECCC-------CE-EECCEEEEeCC--CCcc-CCccCccc
Confidence 112223334544 2355788887665 46777765 57 89999999999 5443 45787654
No 124
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.21 E-value=1.8e-11 Score=109.05 Aligned_cols=134 Identities=16% Similarity=0.097 Sum_probs=83.4
Q ss_pred CcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCC------C-C-ccCc--------CC----------CCceEEecCcc
Q 022090 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCY------A-S-IWKK--------YS----------YDRLRLHLAKQ 61 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~------g-g-~w~~--------~~----------~~~~~~~~~~~ 61 (303)
+||+|||||++|+++|..|++.|++|+|+|+.+.. + | .+.. .. +..+.......
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 82 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAGQ 82 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEETTE
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEECCc
Confidence 69999999999999999999999999999997631 1 1 1110 00 11111111110
Q ss_pred cccCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEE-eecCCCCceeEEEEeeC
Q 022090 62 FCQLPHLPFP-SSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKA-SNLLSPGREIEEYYSGR 139 (303)
Q Consensus 62 ~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~-~~~~~~~~~~~~~~~ad 139 (303)
...+...... .......++..+.+.+.+.+...++.. +++++|+++..++ ++.+.|++ .++ +..+ +++|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i--~~~~~v~~i~~~~-~~~~~v~~~~~g-----~~~~-~~a~ 153 (394)
T 1k0i_A 83 RRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATT--VYQAAEVRLHDLQ-GERPYVTFERDG-----ERLR-LDCD 153 (394)
T ss_dssp EEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEE--ESSCEEEEEECTT-SSSCEEEEEETT-----EEEE-EECS
T ss_pred eEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeE--EeceeEEEEEEec-CCceEEEEecCC-----cEEE-EEeC
Confidence 0000000000 001112356778888888877777554 9999999997653 23577777 443 2237 8999
Q ss_pred EEEEccCCCCC
Q 022090 140 FLVVASGETTN 150 (303)
Q Consensus 140 ~vIlAtG~~~~ 150 (303)
.||.|+|.+|.
T Consensus 154 ~vV~AdG~~S~ 164 (394)
T 1k0i_A 154 YIAGCDGFHGI 164 (394)
T ss_dssp EEEECCCTTCS
T ss_pred EEEECCCCCcH
Confidence 99999998765
No 125
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.21 E-value=3.2e-11 Score=107.53 Aligned_cols=132 Identities=14% Similarity=0.121 Sum_probs=85.7
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCC-------------------ccCc-----CCCCceEEecC-c-
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYAS-------------------IWKK-----YSYDRLRLHLA-K- 60 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg-------------------~w~~-----~~~~~~~~~~~-~- 60 (303)
.+||+|||||++|+++|..|++.|++|+|+|+.+.... .|.. .....+..... .
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g~ 85 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGE 85 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETTE
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCCC
Confidence 47999999999999999999999999999999865411 0000 00001111100 0
Q ss_pred ccccCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHc-CCCceeEeCeEEEEEEEeCCCCeE--EEEEeecCCCCceeEEEE
Q 022090 61 QFCQLPHLPFP-SSYPMFVSRAQFIEHLDHYVSHF-NIGPSIRYQRSVESASYDEATNMW--NVKASNLLSPGREIEEYY 136 (303)
Q Consensus 61 ~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~-~l~~~i~~~~~V~~i~~~~~~~~~--~v~~~~~~~~~~~~~~~~ 136 (303)
....+...... ..+....++..+.+.|.+.+++. ++++ +++++|++++.++ +.+ .|++.++ .+ +
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i--~~~~~v~~i~~~~--~~v~g~v~~~~g-------~~-~ 153 (399)
T 2x3n_A 86 LLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEM--LFETRIEAVQRDE--RHAIDQVRLNDG-------RV-L 153 (399)
T ss_dssp EEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEE--ECSCCEEEEEECT--TSCEEEEEETTS-------CE-E
T ss_pred EEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEE--EcCCEEEEEEEcC--CceEEEEEECCC-------CE-E
Confidence 01011100000 01112357889999999988876 6554 8999999998865 456 7777654 46 8
Q ss_pred eeCEEEEccCCCCC
Q 022090 137 SGRFLVVASGETTN 150 (303)
Q Consensus 137 ~ad~vIlAtG~~~~ 150 (303)
++|.||.|+|.++.
T Consensus 154 ~ad~vV~AdG~~s~ 167 (399)
T 2x3n_A 154 RPRVVVGADGIASY 167 (399)
T ss_dssp EEEEEEECCCTTCH
T ss_pred ECCEEEECCCCChH
Confidence 99999999997663
No 126
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.21 E-value=2.8e-10 Score=106.27 Aligned_cols=136 Identities=14% Similarity=0.125 Sum_probs=86.6
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEE------------ecCc--------------
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRL------------HLAK-------------- 60 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~------------~~~~-------------- 60 (303)
.+||+|||||++|+++|..|+++|.+|+|+|+.+..||...... -.+.. ....
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~-gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~ 204 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAA-GGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNIN 204 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCC-SCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcC-ceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 57999999999999999999999999999999998876432210 00000 0000
Q ss_pred -----------------ccccCCCCCCC-----C--CCC-------CCCCHHHHHHHHHHHHHHcCCCceeEeCeEEEEE
Q 022090 61 -----------------QFCQLPHLPFP-----S--SYP-------MFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESA 109 (303)
Q Consensus 61 -----------------~~~~~~~~~~~-----~--~~~-------~~~~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i 109 (303)
.+.. ...++. . .++ .......+...|.+.+++.++++ +++++|+++
T Consensus 205 ~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i--~~~~~v~~l 281 (571)
T 1y0p_A 205 DPALVKVLSSHSKDSVDWMTA-MGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDL--RMNTRGIEV 281 (571)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH-TTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEE--ESSEEEEEE
T ss_pred CHHHHHHHHHccHHHHHHHHh-cCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEE--EeCCEeeEe
Confidence 0000 000110 0 000 01235688889999888888665 999999999
Q ss_pred EEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCC
Q 022090 110 SYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN 150 (303)
Q Consensus 110 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~ 150 (303)
..++++..+.|...+.. + +..+ +.++.||+|||.++.
T Consensus 282 ~~~~~g~v~Gv~~~~~~-g--~~~~-i~a~~VVlAtGg~~~ 318 (571)
T 1y0p_A 282 LKDDKGTVKGILVKGMY-K--GYYW-VKADAVILATGGFAK 318 (571)
T ss_dssp EECTTSCEEEEEEEETT-T--EEEE-EECSEEEECCCCCTT
T ss_pred EEcCCCeEEEEEEEeCC-C--cEEE-EECCeEEEeCCCccc
Confidence 87642333445554311 1 3347 899999999997653
No 127
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.20 E-value=3e-10 Score=101.65 Aligned_cols=137 Identities=18% Similarity=0.166 Sum_probs=84.8
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCC-eEEEecCCCCCCccCc--------------CC----------CCceEEecCc-
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIP-YVILERENCYASIWKK--------------YS----------YDRLRLHLAK- 60 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~-v~iie~~~~~gg~w~~--------------~~----------~~~~~~~~~~- 60 (303)
.+||+|||||++|+++|..|++.|++ |+|+|+.+..+..... .. ...+......
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~~g 83 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQSG 83 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECTTS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcCCC
Confidence 47999999999999999999999999 9999998765421110 00 0001111000
Q ss_pred -ccccCCCC-CCCCCCC-CCCCHHHHHHHHHHHHHH-cCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEE
Q 022090 61 -QFCQLPHL-PFPSSYP-MFVSRAQFIEHLDHYVSH-FNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYY 136 (303)
Q Consensus 61 -~~~~~~~~-~~~~~~~-~~~~~~~l~~~l~~~~~~-~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~ 136 (303)
.....+.. ......+ ...++..+.++|.+.+.+ .+. ..++++++|++++. + +.++|.+.+..++ +..+ +
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~-~~v~~~~~v~~i~~-~--~~v~v~~~~~~~g--~~~~-~ 156 (410)
T 3c96_A 84 ATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQ-QAVRTGLGVERIEE-R--DGRVLIGARDGHG--KPQA-L 156 (410)
T ss_dssp CEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCT-TSEEESEEEEEEEE-E--TTEEEEEEEETTS--CEEE-E
T ss_pred CEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCC-cEEEECCEEEEEec-C--CccEEEEecCCCC--CceE-E
Confidence 00000000 0000111 234678899999888775 353 13499999999987 4 4577877651111 2257 8
Q ss_pred eeCEEEEccCCCCC
Q 022090 137 SGRFLVVASGETTN 150 (303)
Q Consensus 137 ~ad~vIlAtG~~~~ 150 (303)
++|.||.|+|.+|.
T Consensus 157 ~ad~vV~AdG~~S~ 170 (410)
T 3c96_A 157 GADVLVGADGIHSA 170 (410)
T ss_dssp EESEEEECCCTTCH
T ss_pred ecCEEEECCCccch
Confidence 99999999998764
No 128
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.20 E-value=8.7e-11 Score=103.19 Aligned_cols=62 Identities=10% Similarity=0.052 Sum_probs=48.3
Q ss_pred CHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCC
Q 022090 79 SRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETT 149 (303)
Q Consensus 79 ~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~ 149 (303)
+...+...+.+.+++.|+++ +++++|+++..++ ++.|.|.+.++ +..+ +.||.||+|+|.++
T Consensus 148 ~~~~~~~~l~~~~~~~Gv~i--~~~~~v~~i~~~~-~~~~~v~~~~g-----~~~~-~~a~~VV~A~G~~s 209 (369)
T 3dme_A 148 DSHALMLAYQGDAESDGAQL--VFHTPLIAGRVRP-EGGFELDFGGA-----EPMT-LSCRVLINAAGLHA 209 (369)
T ss_dssp CHHHHHHHHHHHHHHTTCEE--ECSCCEEEEEECT-TSSEEEEECTT-----SCEE-EEEEEEEECCGGGH
T ss_pred CHHHHHHHHHHHHHHCCCEE--ECCCEEEEEEEcC-CceEEEEECCC-----ceeE-EEeCEEEECCCcch
Confidence 45678888888888888665 8899999998865 23488877654 2257 89999999999755
No 129
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.18 E-value=9.9e-11 Score=109.02 Aligned_cols=169 Identities=16% Similarity=0.117 Sum_probs=102.6
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC-CCCCccCcCCCCceEEec-----------Cc--------ccccC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN-CYASIWKKYSYDRLRLHL-----------AK--------QFCQL 65 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~-~~gg~w~~~~~~~~~~~~-----------~~--------~~~~~ 65 (303)
..+||+|||||++|+++|..|++.|.+|+|+|+.. .+|+.+.. +...... .. ....+
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~---ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f 96 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCN---PAIGGVAKGQITREIDALGGEMGKAIDATGIQF 96 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSC---SEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccc---cchhhhhHHHHHHHHHhcccHHHHHHHhcCCch
Confidence 35899999999999999999999999999999974 45543221 1111000 00 00000
Q ss_pred CC---CCCCCCC--CCCCCHHHHHHHHHHHHHHc-CCCceeEeCeEEEEEEEeCCCCeEE-EEEeecCCCCceeEEEEee
Q 022090 66 PH---LPFPSSY--PMFVSRAQFIEHLDHYVSHF-NIGPSIRYQRSVESASYDEATNMWN-VKASNLLSPGREIEEYYSG 138 (303)
Q Consensus 66 ~~---~~~~~~~--~~~~~~~~l~~~l~~~~~~~-~l~~~i~~~~~V~~i~~~~~~~~~~-v~~~~~~~~~~~~~~~~~a 138 (303)
.. ...+... ....++..+...+.+.++++ ++.. ++..|+.+..++ +.+. |.+.++ .. +.|
T Consensus 97 ~~l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I---~~~~V~~L~~d~--g~V~GV~t~~G-------~~-i~A 163 (641)
T 3cp8_A 97 RMLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDL---LQDTVIGVSANS--GKFSSVTVRSG-------RA-IQA 163 (641)
T ss_dssp EEECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEE---EECCEEEEEEET--TEEEEEEETTS-------CE-EEE
T ss_pred hhcccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEE---EeeEEEEEEecC--CEEEEEEECCC-------cE-EEe
Confidence 00 0000000 01245668888888888775 6543 456888887765 3333 665543 47 899
Q ss_pred CEEEEccCCCCCCCCCCCCCccccccCCCCCccEEecccCCCCCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEee
Q 022090 139 RFLVVASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVR 217 (303)
Q Consensus 139 d~vIlAtG~~~~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r 217 (303)
+.||+|||.++ ..+.++|...+ .+ .++ +| +.++++++..|.+.|.+|+.+..
T Consensus 164 d~VVLATG~~s--~~~i~~G~~~~------~~----------------g~~--vG-~~~a~~la~~L~~~G~kv~~l~t 215 (641)
T 3cp8_A 164 KAAILACGTFL--NGLIHIGMDHF------PG----------------GRS--TA-EPPVEGLTESLASLGFSFGRLKT 215 (641)
T ss_dssp EEEEECCTTCB--TCEEEETTEEE------EC----------------SSS--TT-SCCBCSHHHHHHHTTCCEEEEEE
T ss_pred CEEEECcCCCC--Cccceeeeeee------cc----------------ccc--cC-CchhhhhHHHHHhCCceEEeecC
Confidence 99999999543 32233333322 00 111 13 57888999999999999876643
No 130
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.18 E-value=8.4e-11 Score=106.70 Aligned_cols=135 Identities=10% Similarity=0.078 Sum_probs=84.7
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCC--CCccCcC-----------CCC----ceEEecCcccccC-CC-
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCY--ASIWKKY-----------SYD----RLRLHLAKQFCQL-PH- 67 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~--gg~w~~~-----------~~~----~~~~~~~~~~~~~-~~- 67 (303)
.+||+|||||++|+++|..|++.|++|+|+|+.+.. |..+... ... ...... .....+ +.
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~-~~~~~~~~~~ 84 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKI-NGIKLYSPDM 84 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEE-EEEEEECTTS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhh-cceEEECCCC
Confidence 479999999999999999999999999999998753 2222110 000 000000 000000 00
Q ss_pred ---CCCCCCCCCCCCHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEE-EEEeecCCCCceeEEEEeeCEEEE
Q 022090 68 ---LPFPSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWN-VKASNLLSPGREIEEYYSGRFLVV 143 (303)
Q Consensus 68 ---~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~-v~~~~~~~~~~~~~~~~~ad~vIl 143 (303)
.+++. .....++..+.+.|.+.+.+.+++. +++++|+++..++ +.+. |.+.+..++ +..+ +++|.||.
T Consensus 85 ~~~~~~~~-~~~~i~r~~l~~~L~~~a~~~gv~i--~~~~~v~~i~~~~--~~v~gv~~~~~~~G--~~~~-~~ad~VV~ 156 (453)
T 3atr_A 85 QTVWTVNG-EGFELNAPLYNQRVLKEAQDRGVEI--WDLTTAMKPIFED--GYVKGAVLFNRRTN--EELT-VYSKVVVE 156 (453)
T ss_dssp SCEEEEEE-EEEEECHHHHHHHHHHHHHHTTCEE--ESSEEEEEEEEET--TEEEEEEEEETTTT--EEEE-EECSEEEE
T ss_pred ceEEeECC-CcEEEcHHHHHHHHHHHHHHcCCEE--EeCcEEEEEEEEC--CEEEEEEEEEcCCC--ceEE-EEcCEEEE
Confidence 00000 0122467889999999888877655 9999999998765 4433 555432011 2247 89999999
Q ss_pred ccCCCCC
Q 022090 144 ASGETTN 150 (303)
Q Consensus 144 AtG~~~~ 150 (303)
|+|.++.
T Consensus 157 AdG~~s~ 163 (453)
T 3atr_A 157 ATGYSRS 163 (453)
T ss_dssp CCGGGCT
T ss_pred CcCCchh
Confidence 9997664
No 131
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.17 E-value=1.2e-10 Score=103.81 Aligned_cols=129 Identities=19% Similarity=0.217 Sum_probs=75.5
Q ss_pred CcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCc--------cCc--------CCCC--------------ceEEe
Q 022090 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASI--------WKK--------YSYD--------------RLRLH 57 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~--------w~~--------~~~~--------------~~~~~ 57 (303)
.+|+|||||++||++|..|+++|++|+||||++..... +.. ...+ .....
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~ 81 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFY 81 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEe
Confidence 48999999999999999999999999999997643210 000 0000 00000
Q ss_pred -cCcccccCCC--CCCCCCCC----CCCCHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCc
Q 022090 58 -LAKQFCQLPH--LPFPSSYP----MFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGR 130 (303)
Q Consensus 58 -~~~~~~~~~~--~~~~~~~~----~~~~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~ 130 (303)
.......... .+...... ....+..+.+.|.+. +...+++++++++++..+ ++..+|++.++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~-----~~~~v~~~~~v~~~~~~~-~~~v~v~~~dG----- 150 (412)
T 4hb9_A 82 NERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKG-----LANTIQWNKTFVRYEHIE-NGGIKIFFADG----- 150 (412)
T ss_dssp CTTSCEEEC--------------CEEEEEHHHHHHHHHTT-----CTTTEECSCCEEEEEECT-TSCEEEEETTS-----
T ss_pred cCCcceecccCCccccccccccccceEeeHHHHHHHHHhh-----ccceEEEEEEEEeeeEcC-CCeEEEEECCC-----
Confidence 0000000000 00000000 012345555544332 233469999999998765 34678888775
Q ss_pred eeEEEEeeCEEEEccCCCCC
Q 022090 131 EIEEYYSGRFLVVASGETTN 150 (303)
Q Consensus 131 ~~~~~~~ad~vIlAtG~~~~ 150 (303)
.+ +++|.||.|+|.+|.
T Consensus 151 --~~-~~adlvVgADG~~S~ 167 (412)
T 4hb9_A 151 --SH-ENVDVLVGADGSNSK 167 (412)
T ss_dssp --CE-EEESEEEECCCTTCH
T ss_pred --CE-EEeeEEEECCCCCcc
Confidence 56 899999999998773
No 132
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.17 E-value=1.4e-10 Score=102.35 Aligned_cols=62 Identities=13% Similarity=0.215 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCC
Q 022090 80 RAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTP 154 (303)
Q Consensus 80 ~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p 154 (303)
...+...+.+.+++.++.. +++++|+++..++ +.|.|.+.+ .+ +.+|.||+|+|.++....+
T Consensus 148 ~~~l~~~l~~~~~~~G~~i--~~~~~V~~i~~~~--~~~~v~~~~--------g~-~~a~~vV~a~G~~s~~l~~ 209 (372)
T 2uzz_A 148 SELAIKTWIQLAKEAGCAQ--LFNCPVTAIRHDD--DGVTIETAD--------GE-YQAKKAIVCAGTWVKDLLP 209 (372)
T ss_dssp HHHHHHHHHHHHHHTTCEE--ECSCCEEEEEECS--SSEEEEESS--------CE-EEEEEEEECCGGGGGGTST
T ss_pred HHHHHHHHHHHHHHCCCEE--EcCCEEEEEEEcC--CEEEEEECC--------Ce-EEcCEEEEcCCccHHhhcc
Confidence 4578888888888888655 8899999998865 457776654 35 8999999999976543333
No 133
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.16 E-value=3.4e-10 Score=105.53 Aligned_cols=139 Identities=12% Similarity=0.106 Sum_probs=86.6
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcC------CCC----------ceEE------------e
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY------SYD----------RLRL------------H 57 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~------~~~----------~~~~------------~ 57 (303)
..+||+|||||++|+++|..|+++|.+|+|+|+.+..||..... ... .... .
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~~ 199 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQN 199 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 34799999999999999999999999999999998777632210 000 0000 0
Q ss_pred cCc--------------cc----ccC------CCCCCCCCC---CCCCCHHHHHHHHHHHHHHcCCCceeEeCeEEEEEE
Q 022090 58 LAK--------------QF----CQL------PHLPFPSSY---PMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESAS 110 (303)
Q Consensus 58 ~~~--------------~~----~~~------~~~~~~~~~---~~~~~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~ 110 (303)
.+. .+ ..+ ....++... ........+...|.+.+++.++++ +++++|+++.
T Consensus 200 ~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i--~~~~~v~~l~ 277 (566)
T 1qo8_A 200 DIKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDT--RLNSRVVKLV 277 (566)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCE--ECSEEEEEEE
T ss_pred CHHHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEE--EeCCEEEEEE
Confidence 000 00 000 000111000 011336778899999998888766 9999999998
Q ss_pred EeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCC
Q 022090 111 YDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN 150 (303)
Q Consensus 111 ~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~ 150 (303)
.++.+..+.|.+.+.. + +... +.++.||+|||.++.
T Consensus 278 ~~~~g~v~Gv~~~~~~-g--~~~~-i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 278 VNDDHSVVGAVVHGKH-T--GYYM-IGAKSVVLATGGYGM 313 (566)
T ss_dssp ECTTSBEEEEEEEETT-T--EEEE-EEEEEEEECCCCCTT
T ss_pred ECCCCcEEEEEEEeCC-C--cEEE-EEcCEEEEecCCccc
Confidence 7642233345554311 1 3347 899999999998664
No 134
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.15 E-value=1.9e-10 Score=101.79 Aligned_cols=60 Identities=15% Similarity=0.040 Sum_probs=46.5
Q ss_pred CCCHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCC
Q 022090 77 FVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETT 149 (303)
Q Consensus 77 ~~~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~ 149 (303)
......+...+.+.+++.++.. +++++|+++..++ +.|.|.+.+ .+ +.+|.||+|+|.++
T Consensus 160 ~~~~~~~~~~l~~~~~~~g~~i--~~~~~v~~i~~~~--~~~~v~~~~--------g~-~~a~~vV~A~G~~s 219 (382)
T 1ryi_A 160 HVEPYFVCKAYVKAAKMLGAEI--FEHTPVLHVERDG--EALFIKTPS--------GD-VWANHVVVASGVWS 219 (382)
T ss_dssp BCCHHHHHHHHHHHHHHTTCEE--ETTCCCCEEECSS--SSEEEEETT--------EE-EEEEEEEECCGGGT
T ss_pred EEcHHHHHHHHHHHHHHCCCEE--EcCCcEEEEEEEC--CEEEEEcCC--------ce-EEcCEEEECCChhH
Confidence 3456788899999888888655 8899999998755 557666543 46 89999999999754
No 135
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.14 E-value=2.2e-10 Score=109.07 Aligned_cols=59 Identities=14% Similarity=0.250 Sum_probs=47.7
Q ss_pred CHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCC
Q 022090 79 SRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETT 149 (303)
Q Consensus 79 ~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~ 149 (303)
....+...+.+.+++.|+.+ +++++|+++..++ +.|.|.+.++ .+ +.+|.||+|+|.++
T Consensus 415 ~p~~l~~aL~~~a~~~Gv~i--~~~t~V~~l~~~~--~~v~V~t~~G-------~~-i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 415 CPAELTRNVLELAQQQGLQI--YYQYQLQNFSRKD--DCWLLNFAGD-------QQ-ATHSVVVLANGHQI 473 (676)
T ss_dssp CHHHHHHHHHHHHHHTTCEE--EESCCEEEEEEET--TEEEEEETTS-------CE-EEESEEEECCGGGG
T ss_pred CHHHHHHHHHHHHHhCCCEE--EeCCeeeEEEEeC--CeEEEEECCC-------CE-EECCEEEECCCcch
Confidence 45678888888888888665 9999999999876 5688877654 46 89999999999754
No 136
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.13 E-value=7.4e-10 Score=104.96 Aligned_cols=139 Identities=16% Similarity=0.223 Sum_probs=87.3
Q ss_pred CCcEEEECCcHHHHHHHHHHhh-----CCCCeEEEecCCCCCC-------------------ccC----c-CCCCceEEe
Q 022090 7 GVEVIMVGAGTSGLATAACLSL-----QSIPYVILERENCYAS-------------------IWK----K-YSYDRLRLH 57 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~-----~g~~v~iie~~~~~gg-------------------~w~----~-~~~~~~~~~ 57 (303)
.+||+|||||++||++|..|++ .|++|+|||+.+.... .|. . .....+...
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~~~tle~l~~lGl~~~l~~~~~~~~~~~~~ 87 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGLADKILSEANDMSTIALY 87 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTTTCHHHHHTTCBCCCEEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEChHHHHHHHHCCCHHHHHHhccccceEEEE
Confidence 5799999999999999999999 9999999998764321 110 0 011122221
Q ss_pred cCc---ccc---cCCCCCCC-CCC-CCCCCHHHHHHHHHHHHHHcC---CCceeEeCeEEEEEEEeC------CCCeEEE
Q 022090 58 LAK---QFC---QLPHLPFP-SSY-PMFVSRAQFIEHLDHYVSHFN---IGPSIRYQRSVESASYDE------ATNMWNV 120 (303)
Q Consensus 58 ~~~---~~~---~~~~~~~~-~~~-~~~~~~~~l~~~l~~~~~~~~---l~~~i~~~~~V~~i~~~~------~~~~~~v 120 (303)
.+. .+. .++..... ..+ ....++..+.++|.+.+.+.+ +.+ ++++++++++.++ +....++
T Consensus 88 ~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v--~~g~~v~~~~~d~~~~~~~~~~~V~v 165 (665)
T 1pn0_A 88 NPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKV--ERPLIPEKMEIDSSKAEDPEAYPVTM 165 (665)
T ss_dssp EECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCE--ECSEEEEEEEECGGGTTCTTCCCEEE
T ss_pred eCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEE--EeCCEEEEEEecCcccccCCCCCEEE
Confidence 111 000 01100000 011 123578889999999888776 555 9999999998864 1234667
Q ss_pred EEeec---------------------------------------CCCCceeEEEEeeCEEEEccCCCCC
Q 022090 121 KASNL---------------------------------------LSPGREIEEYYSGRFLVVASGETTN 150 (303)
Q Consensus 121 ~~~~~---------------------------------------~~~~~~~~~~~~ad~vIlAtG~~~~ 150 (303)
++.+. ..+ +..+ +++|+||.|+|.+|.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G--~~~~-i~A~~VVGADG~~S~ 231 (665)
T 1pn0_A 166 TLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAG--EIET-VHCKYVIGCDGGHSW 231 (665)
T ss_dssp EEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTT--CEEE-EEEEEEEECCCTTCH
T ss_pred EEEecccccccccccccccccccccccccccccccccccccccCCCC--ceEE-EEeCEEEeccCCCCH
Confidence 66541 111 2357 899999999998763
No 137
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.13 E-value=3.1e-10 Score=98.12 Aligned_cols=104 Identities=20% Similarity=0.282 Sum_probs=64.4
Q ss_pred CCcEEEECCcHHHHHHHHHHhhC--CCCeEEEecCCCCC-CccCcCC-CCceEEecCcccccCC--CCCCCC--CCCCCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQ--SIPYVILERENCYA-SIWKKYS-YDRLRLHLAKQFCQLP--HLPFPS--SYPMFV 78 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~--g~~v~iie~~~~~g-g~w~~~~-~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~ 78 (303)
.+||+|||||++|+++|..|+++ |.+|+|+|+....| ++|.... +...... +.....+. ..++.. .+....
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~-~~~~~~L~~~Gv~~~~~G~~~~~~ 157 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMR-KPADVFLDEVGVPYEDEGDYVVVK 157 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEE-TTTHHHHHHHTCCCEECSSEEEES
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcc-hHHHHHHHHcCCcccccCCeEEEe
Confidence 47999999999999999999997 99999999987665 5664432 2222222 11110000 011100 111112
Q ss_pred CHHHHHHHHHHHHHHc-CCCceeEeCeEEEEEEEeC
Q 022090 79 SRAQFIEHLDHYVSHF-NIGPSIRYQRSVESASYDE 113 (303)
Q Consensus 79 ~~~~l~~~l~~~~~~~-~l~~~i~~~~~V~~i~~~~ 113 (303)
...++.+.|.+.+... ++.. ++++.|+++..++
T Consensus 158 ~~~d~~~~L~~~a~~~~gV~i--~~~~~V~dLi~~~ 191 (344)
T 3jsk_A 158 HAALFTSTVLSKVLQRPNVKL--FNATTVEDLITRK 191 (344)
T ss_dssp CHHHHHHHHHHHHHTCTTEEE--EETEEEEEEEEEE
T ss_pred cHHHHHHHHHHHHHhCCCCEE--EeCCEEEEEEecC
Confidence 3456667777776663 6544 8899998887654
No 138
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.10 E-value=5.8e-10 Score=106.37 Aligned_cols=60 Identities=10% Similarity=0.191 Sum_probs=47.2
Q ss_pred CHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeE-EEEeeCEEEEccCCCCC
Q 022090 79 SRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIE-EYYSGRFLVVASGETTN 150 (303)
Q Consensus 79 ~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~-~~~~ad~vIlAtG~~~~ 150 (303)
+...+...+.+.+++.|+.+ +++++|+++..++ +.|.|.+.++ . + +.+|.||+|+|.++.
T Consensus 410 ~p~~l~~aL~~~a~~~Gv~i--~~~t~V~~l~~~~--~~v~V~t~~G-------~~~-i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 410 CPSDLTHALMMLAQQNGMTC--HYQHELQRLKRID--SQWQLTFGQS-------QAA-KHHATVILATGHRLP 470 (689)
T ss_dssp CHHHHHHHHHHHHHHTTCEE--EESCCEEEEEECS--SSEEEEEC-C-------CCC-EEESEEEECCGGGTT
T ss_pred CHHHHHHHHHHHHHhCCCEE--EeCCeEeEEEEeC--CeEEEEeCCC-------cEE-EECCEEEECCCcchh
Confidence 45678888888888888665 9999999998876 4588887654 3 6 899999999997653
No 139
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.09 E-value=1.1e-09 Score=101.91 Aligned_cols=65 Identities=18% Similarity=0.100 Sum_probs=48.1
Q ss_pred CHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCC
Q 022090 79 SRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETT 149 (303)
Q Consensus 79 ~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~ 149 (303)
+...+...+...+.+.|..+ +++++|+++..++ +..|.|.+.+..++ +..+ +.++.||+|+|.++
T Consensus 168 d~~~l~~~L~~~a~~~G~~i--~~~~~V~~l~~~~-g~v~gV~~~d~~tg--~~~~-i~A~~VV~AaG~~s 232 (561)
T 3da1_A 168 DDARLTLEIMKEAVARGAVA--LNYMKVESFIYDQ-GKVVGVVAKDRLTD--TTHT-IYAKKVVNAAGPWV 232 (561)
T ss_dssp CHHHHHHHHHHHHHHTTCEE--EESEEEEEEEEET-TEEEEEEEEETTTC--CEEE-EEEEEEEECCGGGH
T ss_pred cHHHHHHHHHHHHHHcCCEE--EcCCEEEEEEEcC-CeEEEEEEEEcCCC--ceEE-EECCEEEECCCcch
Confidence 45677778888888888765 8999999998865 23466777653222 3357 89999999999754
No 140
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.09 E-value=2.6e-09 Score=98.32 Aligned_cols=61 Identities=15% Similarity=0.203 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeC-EEEEccCCCC
Q 022090 82 QFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGR-FLVVASGETT 149 (303)
Q Consensus 82 ~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad-~vIlAtG~~~ 149 (303)
.+...|.+.+++.++++ +++++|+++..++++...-|...+.. +..+ +.++ .||+|||.++
T Consensus 203 ~l~~~L~~~~~~~Gv~i--~~~t~v~~L~~~~~g~v~GV~~~~~g----~~~~-i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRA--EYDMRVQTLVTDDTGRVVGIVAKQYG----KEVA-VRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEE--ECSEEEEEEEECTTCCEEEEEEEETT----EEEE-EEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEE--EecCEeEEEEECCCCcEEEEEEEECC----cEEE-EEeCCeEEEeCCChh
Confidence 78888988888888665 99999999988743344445555432 3357 8995 9999999766
No 141
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.09 E-value=7e-10 Score=101.09 Aligned_cols=193 Identities=12% Similarity=0.065 Sum_probs=104.9
Q ss_pred cEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCc--cCcC----CC-C--ceEE--e--------------------
Q 022090 9 EVIMVGAGTSGLATAACLSLQSIPYVILERENCYASI--WKKY----SY-D--RLRL--H-------------------- 57 (303)
Q Consensus 9 ~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~--w~~~----~~-~--~~~~--~-------------------- 57 (303)
||+|||||++|+++|..|++.|.+|+|+|+. ..+|. |... +. + .... .
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~ 79 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTS 79 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHH
Confidence 7999999999999999999999999999998 44443 1110 00 0 0000 0
Q ss_pred -cCc---ccccCCCCCCCC--------CCC-----CCCCHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeE-E
Q 022090 58 -LAK---QFCQLPHLPFPS--------SYP-----MFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMW-N 119 (303)
Q Consensus 58 -~~~---~~~~~~~~~~~~--------~~~-----~~~~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~-~ 119 (303)
.+. .+..+ ..++.. .++ .......+...+.+.+++.+++. ++++.| ++..++ +.. -
T Consensus 80 ~~~~~i~~l~~~-Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i--~~~~~v-~l~~~~--~~v~G 153 (472)
T 2e5v_A 80 EAKNVIETFESW-GFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPI--IEDRLV-EIRVKD--GKVTG 153 (472)
T ss_dssp HHHHHHHHHHHT-TCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCE--ECCCEE-EEEEET--TEEEE
T ss_pred HHHHHHHHHHHc-CCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEE--EECcEE-EEEEeC--CEEEE
Confidence 000 00000 001100 001 11234577788888777778766 889999 987764 322 2
Q ss_pred EEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCCCCC-CccccccCCCCCccEEecc-----cCCCCCCCCC-CeEEEE
Q 022090 120 VKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIR-GLCSFCSSATGTGEVIHST-----QYKNGKPYGG-KNVLVV 192 (303)
Q Consensus 120 v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p~~~-g~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~-~~v~Vi 192 (303)
+...+. + .+ +.+|.||+|||.++ ..+.+. +.... .|.-+... ...+...... ..++++
T Consensus 154 v~v~~~-~-----g~-~~a~~VVlAtGg~~--~~~~~~~~~~~~------tGdgi~~a~~aGa~~~d~e~~q~~p~~~~~ 218 (472)
T 2e5v_A 154 FVTEKR-G-----LV-EDVDKLVLATGGYS--YLYEYSSTQSTN------IGDGMAIAFKAGTILADMEFVQFHPTVTSL 218 (472)
T ss_dssp EEETTT-E-----EE-CCCSEEEECCCCCG--GGSSSBSSCTTC------SCHHHHHHHHTTCCEECTTCEEEEEEEECG
T ss_pred EEEEeC-C-----Ce-EEeeeEEECCCCCc--ccCccccCCCCC------chHHHHHHHHcCCCEeCCcceEEEeEEEcc
Confidence 333221 1 45 78999999999544 333321 11111 22111100 0111111111 234556
Q ss_pred CCCccHHHHHHHHhhccCceEEEeecCeeeeehhh
Q 022090 193 GSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREM 227 (303)
Q Consensus 193 G~G~~g~e~a~~l~~~g~~vt~~~r~~~~~lp~~~ 227 (303)
|+| +.+++..+...|..+ +..+.. ++++..+
T Consensus 219 ggg--~~~~ae~~~~~G~~~-v~~~g~-rf~~~~~ 249 (472)
T 2e5v_A 219 DGE--VFLLTETLRGEGAQI-INENGE-RFLFNYD 249 (472)
T ss_dssp GGC--CEECCTHHHHTTCEE-EETTCC-CGGGGTC
T ss_pred CCC--ceeeehhhcCCceEE-ECCCCC-CCCccCC
Confidence 766 778888888888777 555555 6776543
No 142
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.08 E-value=1.2e-09 Score=96.75 Aligned_cols=59 Identities=10% Similarity=0.006 Sum_probs=46.1
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEE-EEEeecCCCCceeEEEEeeCEEEEccCCCC
Q 022090 78 VSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWN-VKASNLLSPGREIEEYYSGRFLVVASGETT 149 (303)
Q Consensus 78 ~~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~-v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~ 149 (303)
.+...+...+.+.+++.++.. +++++|+++..++ +.+. |.+.+ .+ +++|.||+|+|.++
T Consensus 146 ~~~~~l~~~l~~~~~~~Gv~i--~~~~~v~~i~~~~--~~v~gv~~~~--------g~-i~a~~VV~A~G~~s 205 (382)
T 1y56_B 146 ADPFEATTAFAVKAKEYGAKL--LEYTEVKGFLIEN--NEIKGVKTNK--------GI-IKTGIVVNATNAWA 205 (382)
T ss_dssp ECHHHHHHHHHHHHHHTTCEE--ECSCCEEEEEESS--SBEEEEEETT--------EE-EECSEEEECCGGGH
T ss_pred ECHHHHHHHHHHHHHHCCCEE--ECCceEEEEEEEC--CEEEEEEECC--------cE-EECCEEEECcchhH
Confidence 356788888888888888665 8899999998765 5566 66643 36 89999999999754
No 143
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.07 E-value=3.5e-10 Score=99.90 Aligned_cols=58 Identities=12% Similarity=0.114 Sum_probs=46.5
Q ss_pred CHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCC
Q 022090 79 SRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETT 149 (303)
Q Consensus 79 ~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~ 149 (303)
+...+...+.+.+++.|..+ +++++|+++..++ +.|.|.+.+ .+ +.||.||+|+|.++
T Consensus 152 ~~~~~~~~l~~~a~~~Gv~i--~~~~~V~~i~~~~--~~~~V~t~~--------g~-i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 152 DTDALHQGYLRGIRRNQGQV--LCNHEALEIRRVD--GAWEVRCDA--------GS-YRAAVLVNAAGAWC 209 (381)
T ss_dssp CHHHHHHHHHHHHHHTTCEE--ESSCCCCEEEEET--TEEEEECSS--------EE-EEESEEEECCGGGH
T ss_pred CHHHHHHHHHHHHHHCCCEE--EcCCEEEEEEEeC--CeEEEEeCC--------CE-EEcCEEEECCChhH
Confidence 45778888888888888665 8899999998876 458777654 46 89999999999754
No 144
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.06 E-value=1.1e-09 Score=97.15 Aligned_cols=58 Identities=14% Similarity=0.137 Sum_probs=45.4
Q ss_pred CHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCC
Q 022090 79 SRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETT 149 (303)
Q Consensus 79 ~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~ 149 (303)
+...+...+.+.+++.|+.. +++++|++++.++ +.|.|.+.+ .+ +.+|.||+|+|.++
T Consensus 148 ~~~~~~~~l~~~~~~~Gv~i--~~~~~v~~i~~~~--~~~~v~~~~--------g~-~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 148 FSENCIRAYRELAEARGAKV--LTHTRVEDFDISP--DSVKIETAN--------GS-YTADKLIVSMGAWN 205 (389)
T ss_dssp EHHHHHHHHHHHHHHTTCEE--ECSCCEEEEEECS--SCEEEEETT--------EE-EEEEEEEECCGGGH
T ss_pred eHHHHHHHHHHHHHHCCCEE--EcCcEEEEEEecC--CeEEEEeCC--------CE-EEeCEEEEecCccH
Confidence 34678888888888888665 8899999998865 457776643 46 89999999999654
No 145
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.06 E-value=9.2e-10 Score=97.96 Aligned_cols=56 Identities=16% Similarity=0.083 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCC
Q 022090 80 RAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGET 148 (303)
Q Consensus 80 ~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~ 148 (303)
...+...+.+.+++.++.+ +++++|+++..++ +.+.|.+.+ .+ +.+|.||+|+|.+
T Consensus 152 ~~~~~~~l~~~a~~~Gv~i--~~~~~V~~i~~~~--~~v~v~t~~--------g~-i~a~~VV~A~G~~ 207 (397)
T 2oln_A 152 VRGTLAALFTLAQAAGATL--RAGETVTELVPDA--DGVSVTTDR--------GT-YRAGKVVLACGPY 207 (397)
T ss_dssp HHHHHHHHHHHHHHTTCEE--EESCCEEEEEEET--TEEEEEESS--------CE-EEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHHcCCEE--ECCCEEEEEEEcC--CeEEEEECC--------CE-EEcCEEEEcCCcC
Confidence 4567777778887778655 8999999998765 457776543 36 8999999999965
No 146
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.04 E-value=3.4e-09 Score=97.34 Aligned_cols=64 Identities=19% Similarity=0.183 Sum_probs=48.6
Q ss_pred CHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCC
Q 022090 79 SRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETT 149 (303)
Q Consensus 79 ~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~ 149 (303)
+...+...+.+.+.+.|... +++++|+++..++ +.|.|.+.+..++ +..+ +.++.||+|+|.++
T Consensus 147 ~~~~l~~~l~~~a~~~Gv~i--~~~~~V~~l~~~~--~~~~V~~~d~~~G--~~~~-i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 147 DDARLVLANAQMVVRKGGEV--LTRTRATSARREN--GLWIVEAEDIDTG--KKYS-WQARGLVNATGPWV 210 (501)
T ss_dssp CHHHHHHHHHHHHHHTTCEE--ECSEEEEEEEEET--TEEEEEEEETTTC--CEEE-EEESCEEECCGGGH
T ss_pred cHHHHHHHHHHHHHHcCCEE--EcCcEEEEEEEeC--CEEEEEEEECCCC--CEEE-EECCEEEECCChhH
Confidence 45678888888888888665 8899999998875 6788887642222 2247 89999999999754
No 147
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.02 E-value=1.5e-09 Score=96.77 Aligned_cols=60 Identities=8% Similarity=0.036 Sum_probs=45.6
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCC
Q 022090 78 VSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETT 149 (303)
Q Consensus 78 ~~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~ 149 (303)
.+...+...+.+.+++.+++. +++++|+++..++ +..+.|.+.+ .+ +.+|.||+|+|.++
T Consensus 171 ~~~~~~~~~l~~~~~~~g~~i--~~~~~v~~i~~~~-~~~~~v~~~~--------g~-~~a~~vV~a~G~~s 230 (405)
T 2gag_B 171 AKHDHVAWAFARKANEMGVDI--IQNCEVTGFIKDG-EKVTGVKTTR--------GT-IHAGKVALAGAGHS 230 (405)
T ss_dssp CCHHHHHHHHHHHHHHTTCEE--ECSCCEEEEEESS-SBEEEEEETT--------CC-EEEEEEEECCGGGH
T ss_pred CCHHHHHHHHHHHHHHCCCEE--EcCCeEEEEEEeC-CEEEEEEeCC--------ce-EECCEEEECCchhH
Confidence 345678888888888888665 8999999998764 3346676654 24 78999999999644
No 148
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.01 E-value=4.5e-10 Score=104.09 Aligned_cols=62 Identities=8% Similarity=0.087 Sum_probs=46.7
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCC
Q 022090 78 VSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN 150 (303)
Q Consensus 78 ~~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~ 150 (303)
.++..+..+|.+.++..|+.. +++ +|+++..++++..+.|.+.++ .+ +.+|.||+|+|.++.
T Consensus 162 i~~~~l~~~L~~~a~~~gv~~--~~~-~v~~i~~~~~g~~~~v~~~~g-------~~-i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 162 FDAHLVADFLKRWAVERGVNR--VVD-EVVDVRLNNRGYISNLLTKEG-------RT-LEADLFIDCSGMRGL 223 (538)
T ss_dssp ECHHHHHHHHHHHHHHTTCEE--EEC-CEEEEEECTTSCEEEEEETTS-------CE-ECCSEEEECCGGGCC
T ss_pred EeHHHHHHHHHHHHHHCCCEE--EEe-eEeEEEEcCCCcEEEEEECCC-------cE-EEeCEEEECCCCchh
Confidence 456888999999988888665 778 799998765333456666553 46 899999999997554
No 149
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.00 E-value=1.1e-08 Score=95.43 Aligned_cols=138 Identities=17% Similarity=0.135 Sum_probs=85.1
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcC--------CCC--ceEE-ecCcc--------------
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY--------SYD--RLRL-HLAKQ-------------- 61 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~--------~~~--~~~~-~~~~~-------------- 61 (303)
.+||+|||+|++|+++|..|++.|.+|+|+|+.+..||..... ... .... .....
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~ 205 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNIND 205 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 4699999999999999999999999999999998877643211 000 0000 00000
Q ss_pred -----------------c----ccCC------CCCCCCCC-C--CCCCHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEE
Q 022090 62 -----------------F----CQLP------HLPFPSSY-P--MFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASY 111 (303)
Q Consensus 62 -----------------~----~~~~------~~~~~~~~-~--~~~~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~ 111 (303)
+ ..+. ...++... + .......+...|.+.+++.++++ +++++|+++..
T Consensus 206 ~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv~i--~~~t~v~~l~~ 283 (572)
T 1d4d_A 206 PELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTDI--RLNSRVVRILE 283 (572)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEE--ESSEEEEEEEE
T ss_pred HHHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCCeE--EecCEEEEEEE
Confidence 0 0000 00000000 0 01235678888999888888665 99999999976
Q ss_pred eCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCC
Q 022090 112 DEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN 150 (303)
Q Consensus 112 ~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~ 150 (303)
++.+..+.|...+.. + +... +.++.||+|||.++.
T Consensus 284 ~~~g~v~GV~~~~~~-G--~~~~-i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 284 DASGKVTGVLVKGEY-T--GYYV-IKADAVVIAAGGFAK 318 (572)
T ss_dssp C--CCEEEEEEEETT-T--EEEE-EECSEEEECCCCCTT
T ss_pred CCCCeEEEEEEEeCC-C--cEEE-EEcCEEEEeCCCCcc
Confidence 542344445555311 1 3357 899999999997653
No 150
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.00 E-value=2e-09 Score=92.45 Aligned_cols=105 Identities=23% Similarity=0.320 Sum_probs=64.4
Q ss_pred CCcEEEECCcHHHHHHHHHHhhC--CCCeEEEecCCCCC-CccCcC-CCCceEEecCc-ccccCCCCCCCC--CCCCCCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQ--SIPYVILERENCYA-SIWKKY-SYDRLRLHLAK-QFCQLPHLPFPS--SYPMFVS 79 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~--g~~v~iie~~~~~g-g~w~~~-~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~ 79 (303)
.+||+|||||++|+++|..|++. |.+|+|+|+.+..| +.|... .+......... ....-...++.. .+.....
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~g~~~~~~~ 144 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKH 144 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEECSSEEEESC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccccCCCeEEEcc
Confidence 35999999999999999999998 99999999988776 566422 12222222110 000000111111 1111114
Q ss_pred HHHHHHHHHHHHHHc-CCCceeEeCeEEEEEEEeC
Q 022090 80 RAQFIEHLDHYVSHF-NIGPSIRYQRSVESASYDE 113 (303)
Q Consensus 80 ~~~l~~~l~~~~~~~-~l~~~i~~~~~V~~i~~~~ 113 (303)
..++...+.+.+... ++.. +.+++|+++..++
T Consensus 145 ~~~~~~~L~~~a~~~~GV~i--~~~~~V~~Ll~~~ 177 (326)
T 2gjc_A 145 AALFISTVLSKVLQLPNVKL--FNATCVEDLVTRP 177 (326)
T ss_dssp HHHHHHHHHHHHHTSTTEEE--ETTEEEEEEEECC
T ss_pred hHHHHHHHHHHHHHhcCcEE--Eecceeeeeeecc
Confidence 566777777777664 6544 8889999998764
No 151
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.99 E-value=4.2e-09 Score=98.39 Aligned_cols=145 Identities=16% Similarity=0.127 Sum_probs=86.0
Q ss_pred CCCCCCCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCc---------cCcCC--CCceEEe------cCcccc
Q 022090 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASI---------WKKYS--YDRLRLH------LAKQFC 63 (303)
Q Consensus 1 M~~~~~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~---------w~~~~--~~~~~~~------~~~~~~ 63 (303)
|......+||+|||||++|+++|..|++.|.+|+|+||....+|. |.... .+....+ ......
T Consensus 1 m~~~~~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g~s~~a~GGi~~~~~~~~~ds~~~~~~d~~~~g~~~~ 80 (588)
T 2wdq_A 1 MKLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIG 80 (588)
T ss_dssp CCSCEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCS
T ss_pred CCCccccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCcchhhCCccEEcCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 555445689999999999999999999999999999998755321 11110 0000000 000000
Q ss_pred -----------------cC--CCCCCCC---------CCCC---------C--------CCHHHHHHHHHHHHHHcCCCc
Q 022090 64 -----------------QL--PHLPFPS---------SYPM---------F--------VSRAQFIEHLDHYVSHFNIGP 98 (303)
Q Consensus 64 -----------------~~--~~~~~~~---------~~~~---------~--------~~~~~l~~~l~~~~~~~~l~~ 98 (303)
.+ ...++.. ..+. . .....+...|.+.+.+.++++
T Consensus 81 d~~~v~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~g~~~~~~~~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i 160 (588)
T 2wdq_A 81 DQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTI 160 (588)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTCSBCCCEECSTTCHHHHHHHHHHHHHHHTTCEE
T ss_pred CHHHHHHHHHhHHHHHHHHHHcCCCcccCCCCcEeeeecCCccccccccCcceEEEcCCCCHHHHHHHHHHHHHhCCCEE
Confidence 00 0011100 0000 0 113577888888888777655
Q ss_pred eeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCC
Q 022090 99 SIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN 150 (303)
Q Consensus 99 ~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~ 150 (303)
++++.|+++..++++..+-|...+..++ +... +.++.||+|||.++.
T Consensus 161 --~~~~~v~~L~~~~~g~v~Gv~~~~~~~g--~~~~-i~A~~VVlAtGg~~~ 207 (588)
T 2wdq_A 161 --FSEWYALDLVKNQDGAVVGCTALCIETG--EVVY-FKARATVLATGGAGR 207 (588)
T ss_dssp --EETEEEEEEEECTTSCEEEEEEEETTTC--CEEE-EEEEEEEECCCCCGG
T ss_pred --EeCcEEEEEEECCCCEEEEEEEEEcCCC--eEEE-EEcCEEEECCCCCcc
Confidence 9999999998753233444555432222 3347 899999999997653
No 152
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.96 E-value=1.9e-09 Score=96.70 Aligned_cols=39 Identities=28% Similarity=0.396 Sum_probs=36.3
Q ss_pred CcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCcc
Q 022090 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIW 46 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w 46 (303)
+||+|||||++||++|..|+++|.+|+|+|+++.+||..
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~ 39 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRF 39 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCce
Confidence 489999999999999999999999999999999888743
No 153
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.95 E-value=4.5e-10 Score=100.39 Aligned_cols=37 Identities=22% Similarity=0.354 Sum_probs=33.4
Q ss_pred CCcEEEECCcHHHHHHHHHHhhC--CCCeEEEecCCCCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQ--SIPYVILERENCYA 43 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~--g~~v~iie~~~~~g 43 (303)
.+||+|||||++|+++|..|+++ |.+|+|+|+....+
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~ 74 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPN 74 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSC
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCC
Confidence 37999999999999999999999 99999999976443
No 154
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.94 E-value=1.2e-09 Score=91.44 Aligned_cols=41 Identities=17% Similarity=0.356 Sum_probs=38.4
Q ss_pred CcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCc
Q 022090 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK 48 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~ 48 (303)
+||+||||||+||+||..|+++|++|+||||++.+||.+..
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~ 43 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSS 43 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccc
Confidence 69999999999999999999999999999999999987654
No 155
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.93 E-value=4.2e-09 Score=97.29 Aligned_cols=62 Identities=13% Similarity=0.220 Sum_probs=46.0
Q ss_pred CCHHHHHHHHHHHHHH-cCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCC
Q 022090 78 VSRAQFIEHLDHYVSH-FNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN 150 (303)
Q Consensus 78 ~~~~~l~~~l~~~~~~-~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~ 150 (303)
.++..+..+|.+.+++ .|+.. +++ +|+++..+++.....|.+.++ .+ +.+|.||.|+|.+|.
T Consensus 172 ~~r~~l~~~L~~~a~~~~Gv~i--~~~-~v~~i~~~~~g~~~~v~~~~g-------~~-i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 172 LNAAKFSQLLTEHCTQKLGVTH--IRD-HVSQIINNQHGDIEKLITKQN-------GE-ISGQLFIDCTGAKSL 234 (526)
T ss_dssp ECHHHHHHHHHHHHHHTSCCEE--EEC-CEEEEEECTTSCEEEEEESSS-------CE-EECSEEEECSGGGCC
T ss_pred EcHHHHHHHHHHHHHhcCCCEE--EEe-EEEEEEecCCCcEEEEEECCC-------CE-EEcCEEEECCCcchH
Confidence 4678899999999988 78755 788 599998765322345665543 46 899999999997654
No 156
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.92 E-value=3.9e-09 Score=94.92 Aligned_cols=39 Identities=28% Similarity=0.315 Sum_probs=36.2
Q ss_pred CcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCcc
Q 022090 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIW 46 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w 46 (303)
+||+|||||++|+++|..|+++|.+|+|+|+++.+||..
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~ 40 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRA 40 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTC
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCee
Confidence 699999999999999999999999999999988887743
No 157
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.91 E-value=1.8e-09 Score=96.94 Aligned_cols=39 Identities=26% Similarity=0.467 Sum_probs=36.3
Q ss_pred CcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCcc
Q 022090 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIW 46 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w 46 (303)
+||+|||||++||++|..|+++|.+|+|+|+++.+||..
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~ 39 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRF 39 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCcee
Confidence 489999999999999999999999999999999888754
No 158
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.90 E-value=6.5e-09 Score=96.56 Aligned_cols=62 Identities=15% Similarity=0.165 Sum_probs=47.5
Q ss_pred CCHHHHHHHHHHHHHHc-CCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCC
Q 022090 78 VSRAQFIEHLDHYVSHF-NIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN 150 (303)
Q Consensus 78 ~~~~~l~~~l~~~~~~~-~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~ 150 (303)
.++..+.++|.+.+++. |+.. +++ +|+++..+++...+.|.+.++ .+ +.+|.||+|+|..+.
T Consensus 191 ~~~~~l~~~L~~~~~~~~Gv~i--~~~-~V~~i~~~~~g~~~~v~~~~G-------~~-i~ad~vI~A~G~~S~ 253 (550)
T 2e4g_A 191 FDAHLVADFLRRFATEKLGVRH--VED-RVEHVQRDANGNIESVRTATG-------RV-FDADLFVDCSGFRGL 253 (550)
T ss_dssp ECHHHHHHHHHHHHHHHSCCEE--EEC-CEEEEEECTTSCEEEEEETTS-------CE-EECSEEEECCGGGCC
T ss_pred EcHHHHHHHHHHHHHhcCCcEE--EEC-eEeEEEEcCCCCEEEEEECCC-------CE-EECCEEEECCCCchh
Confidence 56788999999999888 8766 888 899998755333355666553 56 899999999997553
No 159
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.89 E-value=1.9e-09 Score=97.85 Aligned_cols=39 Identities=21% Similarity=0.369 Sum_probs=36.4
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCC------CCeEEEecCCCCCCc
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQS------IPYVILERENCYASI 45 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g------~~v~iie~~~~~gg~ 45 (303)
++||+|||||++||++|..|+++| ++|+|+|+++.+||.
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~ 49 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGK 49 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCce
Confidence 479999999999999999999999 999999999888873
No 160
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.89 E-value=4.3e-09 Score=96.85 Aligned_cols=62 Identities=18% Similarity=0.168 Sum_probs=47.4
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCC
Q 022090 78 VSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN 150 (303)
Q Consensus 78 ~~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~ 150 (303)
.++..+...|.+.+...|+.. +++ +|+++..+++...+.|.+.++ .+ +++|.||.|+|.++.
T Consensus 170 ~~~~~l~~~L~~~a~~~gv~~--~~~-~v~~i~~~~~~~~~~v~~~~g-------~~-~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 170 FDADEVARYLSEYAIARGVRH--VVD-DVQHVGQDERGWISGVHTKQH-------GE-ISGDLFVDCTGFRGL 231 (511)
T ss_dssp ECHHHHHHHHHHHHHHTTCEE--EEC-CEEEEEECTTSCEEEEEESSS-------CE-EECSEEEECCGGGCC
T ss_pred EcHHHHHHHHHHHHHHCCCEE--EEC-eEeEEEEcCCCCEEEEEECCC-------CE-EEcCEEEECCCcchH
Confidence 467899999999998888665 888 899998755333356666553 47 899999999997654
No 161
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.85 E-value=2.8e-08 Score=92.59 Aligned_cols=38 Identities=16% Similarity=0.359 Sum_probs=34.8
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYAS 44 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg 44 (303)
.+||+|||||++|+++|..|+++|.+|+|+|+++..+|
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~~~~G 69 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQDFAEG 69 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 57999999999999999999999999999999875554
No 162
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.84 E-value=1.7e-08 Score=98.19 Aligned_cols=58 Identities=14% Similarity=0.071 Sum_probs=44.8
Q ss_pred CHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCe-EEEEEeecCCCCceeEEEEeeCEEEEccCCCC
Q 022090 79 SRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNM-WNVKASNLLSPGREIEEYYSGRFLVVASGETT 149 (303)
Q Consensus 79 ~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~-~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~ 149 (303)
+...+...+.+.+++.|+.+ +++++|+++..++ +. +.|.+.+ .+ +.||.||+|+|.++
T Consensus 149 ~p~~l~~~L~~~a~~~Gv~i--~~~t~V~~i~~~~--~~v~~V~t~~--------G~-i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 149 SAARAVQLLIKRTESAGVTY--RGSTTVTGIEQSG--GRVTGVQTAD--------GV-IPADIVVSCAGFWG 207 (830)
T ss_dssp CHHHHHHHHHHHHHHTTCEE--ECSCCEEEEEEET--TEEEEEEETT--------EE-EECSEEEECCGGGH
T ss_pred cHHHHHHHHHHHHHHcCCEE--ECCceEEEEEEeC--CEEEEEEECC--------cE-EECCEEEECCccch
Confidence 55678888888888888665 8899999998865 33 3465543 46 89999999999754
No 163
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.83 E-value=1.3e-08 Score=94.19 Aligned_cols=38 Identities=21% Similarity=0.415 Sum_probs=34.0
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYAS 44 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg 44 (303)
..+||+|||||++|+++|..|++ |.+|+|+||.+..+|
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g 44 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEG 44 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC-
T ss_pred CCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCC
Confidence 35799999999999999999999 999999999886654
No 164
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.81 E-value=3.1e-08 Score=89.75 Aligned_cols=100 Identities=18% Similarity=0.200 Sum_probs=77.8
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
+.+|+|||+|++|+.+|..|++.|.+|+++|+.+.+. +. ...++.+.
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l----------------------~~-----------~~~~~~~~ 213 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRIL----------------------PT-----------MDLEVSRA 213 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC----------------------TT-----------SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccc----------------------cc-----------cCHHHHHH
Confidence 4789999999999999999999999999999986531 00 01366777
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~ 153 (303)
+.+.+++.+++. +++++|++++.++ +.+.+.+.++ .+ +.+|.||+|+| ..|+.
T Consensus 214 l~~~l~~~Gv~i--~~~~~V~~i~~~~--~~v~v~~~~g-------~~-i~~D~vv~A~G--~~p~~ 266 (455)
T 2yqu_A 214 AERVFKKQGLTI--RTGVRVTAVVPEA--KGARVELEGG-------EV-LEADRVLVAVG--RRPYT 266 (455)
T ss_dssp HHHHHHHHTCEE--ECSCCEEEEEEET--TEEEEEETTS-------CE-EEESEEEECSC--EEECC
T ss_pred HHHHHHHCCCEE--EECCEEEEEEEeC--CEEEEEECCC-------eE-EEcCEEEECcC--CCcCC
Confidence 778778788766 9999999998765 4566666543 56 89999999999 55544
No 165
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.80 E-value=6.7e-08 Score=90.52 Aligned_cols=36 Identities=19% Similarity=0.334 Sum_probs=33.2
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCC--CCeEEEecCCCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQS--IPYVILERENCY 42 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g--~~v~iie~~~~~ 42 (303)
.+||+|||||++|+++|..|++.| .+|+|+|+....
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~ 42 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPM 42 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGG
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCC
Confidence 479999999999999999999999 999999998644
No 166
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.79 E-value=3.2e-08 Score=87.68 Aligned_cols=97 Identities=14% Similarity=0.064 Sum_probs=76.8
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
..+++|||+|+.|+.+|..|.+.|.+|+++|+.+.+... + ...++.+.
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~-------------------------------~-~~~~~~~~ 192 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPG-------------------------------L-LHPAAAKA 192 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-------------------------------T-SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhc-------------------------------c-cCHHHHHH
Confidence 578999999999999999999999999999997643110 0 01366777
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~ 147 (303)
+.+.+++.+++. +++++|++++.++ +.+.|.+.++ .+ +++|.||+|+|.
T Consensus 193 l~~~l~~~gv~i--~~~~~v~~i~~~~--~~~~v~~~~g-------~~-i~~d~vv~a~G~ 241 (384)
T 2v3a_A 193 VQAGLEGLGVRF--HLGPVLASLKKAG--EGLEAHLSDG-------EV-IPCDLVVSAVGL 241 (384)
T ss_dssp HHHHHHTTTCEE--EESCCEEEEEEET--TEEEEEETTS-------CE-EEESEEEECSCE
T ss_pred HHHHHHHcCCEE--EeCCEEEEEEecC--CEEEEEECCC-------CE-EECCEEEECcCC
Confidence 888888788766 8999999998765 4567777654 56 899999999993
No 167
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.78 E-value=5e-08 Score=88.64 Aligned_cols=106 Identities=16% Similarity=0.134 Sum_probs=79.7
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
+.+|+|||||+.|+.+|..|++.|.+|+++|+.+.+.. . ...++.+.
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~----------------------~-----------~~~~~~~~ 215 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILP----------------------Q-----------GDPETAAL 215 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST----------------------T-----------SCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcccc----------------------c-----------cCHHHHHH
Confidence 47899999999999999999999999999999875310 0 01367778
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTP 154 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p 154 (303)
+.+.+++.+++. +++++|++++.++ +.+.|.+.+..++ +..+ +.+|.||+|+| ..|+..
T Consensus 216 l~~~l~~~gV~i--~~~~~v~~i~~~~--~~~~v~~~~~~~g--~~~~-i~~D~vv~a~G--~~p~~~ 274 (464)
T 2eq6_A 216 LRRALEKEGIRV--RTKTKAVGYEKKK--DGLHVRLEPAEGG--EGEE-VVVDKVLVAVG--RKPRTE 274 (464)
T ss_dssp HHHHHHHTTCEE--ECSEEEEEEEEET--TEEEEEEEETTCC--SCEE-EEESEEEECSC--EEESCT
T ss_pred HHHHHHhcCCEE--EcCCEEEEEEEeC--CEEEEEEeecCCC--ceeE-EEcCEEEECCC--cccCCC
Confidence 888888888766 9999999998765 4566766521001 2247 89999999999 555544
No 168
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.78 E-value=5.2e-08 Score=91.36 Aligned_cols=37 Identities=24% Similarity=0.256 Sum_probs=33.6
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYA 43 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~g 43 (303)
.+||+|||||++|+++|..|++.|.+|+|+|+....+
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~ 54 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTR 54 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGG
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCC
Confidence 4799999999999999999999999999999986433
No 169
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.78 E-value=8e-08 Score=90.71 Aligned_cols=37 Identities=16% Similarity=0.318 Sum_probs=34.0
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCY 42 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~ 42 (303)
..+||+|||||++|+++|..|++.|.+|+|+|+....
T Consensus 4 ~~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~ 40 (660)
T 2bs2_A 4 QYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVK 40 (660)
T ss_dssp EECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGG
T ss_pred ccccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCC
Confidence 3579999999999999999999999999999998754
No 170
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.78 E-value=9e-08 Score=87.28 Aligned_cols=108 Identities=15% Similarity=0.251 Sum_probs=80.2
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
+.+|+|||||+.|+.+|..|++.|.+|+++++.+.+...+ ..++.++
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~---------------------------------~~~~~~~ 229 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGASM---------------------------------DGEVAKA 229 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSSS---------------------------------CHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcccccc---------------------------------CHHHHHH
Confidence 5789999999999999999999999999999987532110 1367788
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTP 154 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p 154 (303)
+.+.+++.+++. +++++|++++..+.++.+.|.+.+..++ +..+ +.+|.||+|+| ..|+..
T Consensus 230 l~~~l~~~gv~i--~~~~~v~~i~~~~~~~~~~v~~~~~~~g--~~~~-~~~D~vv~a~G--~~p~~~ 290 (478)
T 1v59_A 230 TQKFLKKQGLDF--KLSTKVISAKRNDDKNVVEIVVEDTKTN--KQEN-LEAEVLLVAVG--RRPYIA 290 (478)
T ss_dssp HHHHHHHTTCEE--ECSEEEEEEEEETTTTEEEEEEEETTTT--EEEE-EEESEEEECSC--EEECCT
T ss_pred HHHHHHHCCCEE--EeCCEEEEEEEecCCCeEEEEEEEcCCC--CceE-EECCEEEECCC--CCcCCC
Confidence 888888888766 9999999998732234566766521111 1257 89999999999 555543
No 171
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.77 E-value=2.2e-08 Score=88.02 Aligned_cols=44 Identities=27% Similarity=0.363 Sum_probs=40.4
Q ss_pred CCCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecC-CCCCCccCc
Q 022090 5 AAGVEVIMVGAGTSGLATAACLSLQSIPYVILERE-NCYASIWKK 48 (303)
Q Consensus 5 ~~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~-~~~gg~w~~ 48 (303)
...+||+|||||++||++|..|.++|++|+|+|++ +.+||.|..
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t 86 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKT 86 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCE
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceee
Confidence 34689999999999999999999999999999999 999997764
No 172
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.76 E-value=2e-09 Score=95.32 Aligned_cols=119 Identities=15% Similarity=0.120 Sum_probs=73.9
Q ss_pred CcEEEECCcHHHHHHHHHHhhC--CCCeEEEecCCCC---CCc--cCcCCCC----------c-e----EEecCcccccC
Q 022090 8 VEVIMVGAGTSGLATAACLSLQ--SIPYVILERENCY---ASI--WKKYSYD----------R-L----RLHLAKQFCQL 65 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~--g~~v~iie~~~~~---gg~--w~~~~~~----------~-~----~~~~~~~~~~~ 65 (303)
+||+|||||++|+++|..|++. |++|+|+|+++.. |.. +..+... . + .......+..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 79 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVH- 79 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEE-
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEe-
Confidence 3899999999999999999999 9999999998765 221 0000000 0 0 0000000000
Q ss_pred CCCCCCC--CCC-CCCCHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEE
Q 022090 66 PHLPFPS--SYP-MFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLV 142 (303)
Q Consensus 66 ~~~~~~~--~~~-~~~~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vI 142 (303)
....... ..+ ...++.++.+.|.+.++..++.. +++++|++++.. .. +++|.||
T Consensus 80 ~g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i--~~~~~v~~i~~~--------------------~~-~~ad~vV 136 (381)
T 3c4a_A 80 HNEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAI--RFESPLLEHGEL--------------------PL-ADYDLVV 136 (381)
T ss_dssp SSSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEE--ETTCCCCSGGGC--------------------CG-GGCSEEE
T ss_pred CCeeEEecCCCceeeecHHHHHHHHHHHHHHCCCEE--EeCCEeccchhc--------------------cc-ccCCEEE
Confidence 0000000 001 12468899999999998887655 888888766321 12 5789999
Q ss_pred EccCCCCC
Q 022090 143 VASGETTN 150 (303)
Q Consensus 143 lAtG~~~~ 150 (303)
.|+|.+|.
T Consensus 137 ~AdG~~S~ 144 (381)
T 3c4a_A 137 LANGVNHK 144 (381)
T ss_dssp ECCGGGGG
T ss_pred ECCCCCch
Confidence 99998765
No 173
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.75 E-value=9.4e-08 Score=86.62 Aligned_cols=103 Identities=15% Similarity=0.146 Sum_probs=78.2
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
+++|+|||+|+.|+.+|..|++.|.+|+++|+.+.+. +. ...++.++
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l----------------------~~-----------~~~~~~~~ 216 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEIL----------------------SG-----------FEKQMAAI 216 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS----------------------TT-----------SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc----------------------cc-----------cCHHHHHH
Confidence 5799999999999999999999999999999986531 00 01367777
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~ 153 (303)
+.+.+++.+++. +++++|++++.++ +...+.+.+.+ +..+ +.+|.||+|+| ..|+.
T Consensus 217 l~~~l~~~gv~i--~~~~~v~~i~~~~--~~~~v~~~~~g----~~~~-~~~D~vv~a~G--~~p~~ 272 (455)
T 1ebd_A 217 IKKRLKKKGVEV--VTNALAKGAEERE--DGVTVTYEANG----ETKT-IDADYVLVTVG--RRPNT 272 (455)
T ss_dssp HHHHHHHTTCEE--EESEEEEEEEEET--TEEEEEEEETT----EEEE-EEESEEEECSC--EEESC
T ss_pred HHHHHHHCCCEE--EeCCEEEEEEEeC--CeEEEEEEeCC----ceeE-EEcCEEEECcC--CCccc
Confidence 888888888766 9999999998765 44566654211 1157 89999999999 55544
No 174
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.74 E-value=5.1e-09 Score=96.20 Aligned_cols=46 Identities=24% Similarity=0.447 Sum_probs=39.1
Q ss_pred CCCCCCCCcEEEECCcHHHHHHHHHHhhC-CCCeEEEecCCCCCCcc
Q 022090 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQ-SIPYVILERENCYASIW 46 (303)
Q Consensus 1 M~~~~~~~~vvIIGaG~aGl~~A~~l~~~-g~~v~iie~~~~~gg~w 46 (303)
|+.+...+||+|||||++||+||..|+++ |++|+|+|+++.+||..
T Consensus 4 Ms~p~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~ 50 (513)
T 4gde_A 4 MTHPDISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLA 50 (513)
T ss_dssp --CCSEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGG
T ss_pred CCCCCCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCe
Confidence 55554568999999999999999999875 99999999999999943
No 175
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.72 E-value=3.3e-08 Score=89.43 Aligned_cols=102 Identities=20% Similarity=0.287 Sum_probs=76.5
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHH
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 85 (303)
..++|+|||+|++|+.+|..|++.|.+|+++|+.+.+... + ...++.+
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-------------------------------~-~~~~~~~ 195 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV-------------------------------Y-LDKEFTD 195 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT-------------------------------T-CCHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccc-------------------------------c-CCHHHHH
Confidence 4579999999999999999999999999999998753210 0 0136778
Q ss_pred HHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCC
Q 022090 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTP 154 (303)
Q Consensus 86 ~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p 154 (303)
.+.+.+++.+++. +++++|++++.++ ..+.+.+.+ .+ +++|.||+|+| ..|+.+
T Consensus 196 ~l~~~l~~~gv~i--~~~~~v~~i~~~~--~v~~v~~~~--------~~-i~~d~vi~a~G--~~p~~~ 249 (447)
T 1nhp_A 196 VLTEEMEANNITI--ATGETVERYEGDG--RVQKVVTDK--------NA-YDADLVVVAVG--VRPNTA 249 (447)
T ss_dssp HHHHHHHTTTEEE--EESCCEEEEECSS--BCCEEEESS--------CE-EECSEEEECSC--EEESCG
T ss_pred HHHHHHHhCCCEE--EcCCEEEEEEccC--cEEEEEECC--------CE-EECCEEEECcC--CCCChH
Confidence 8888888888665 8999999987542 333455432 46 89999999999 555543
No 176
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.72 E-value=7.1e-08 Score=87.32 Aligned_cols=101 Identities=14% Similarity=0.103 Sum_probs=78.2
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
+.+|+|||+|+.|+.+|..|++.|.+|+++|+.+.+. +.+ ..++.+.
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l----------------------~~~-----------~~~~~~~ 213 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPL----------------------PSF-----------DPMISET 213 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS----------------------TTS-----------CHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchh----------------------hhh-----------hHHHHHH
Confidence 5689999999999999999999999999999876431 000 1256777
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~ 153 (303)
+.+.+++.+++. +++++|++++.++ ++.+.|.+.++ .+ +.+|.||+|+| ..|+.
T Consensus 214 l~~~l~~~Gv~i--~~~~~v~~i~~~~-~~~~~v~~~~g-------~~-i~~D~vv~a~G--~~p~~ 267 (450)
T 1ges_A 214 LVEVMNAEGPQL--HTNAIPKAVVKNT-DGSLTLELEDG-------RS-ETVDCLIWAIG--REPAN 267 (450)
T ss_dssp HHHHHHHHSCEE--ECSCCEEEEEECT-TSCEEEEETTS-------CE-EEESEEEECSC--EEESC
T ss_pred HHHHHHHCCCEE--EeCCEEEEEEEeC-CcEEEEEECCC-------cE-EEcCEEEECCC--CCcCC
Confidence 888888888766 9999999998754 23366777654 46 89999999999 55554
No 177
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.72 E-value=9.9e-08 Score=90.06 Aligned_cols=35 Identities=17% Similarity=0.302 Sum_probs=32.5
Q ss_pred CCcEEEECCcHHHHHHHHHHhhC------CCCeEEEecCCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQ------SIPYVILERENC 41 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~------g~~v~iie~~~~ 41 (303)
.+||+|||||++||++|..|++. |.+|+|+||...
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~ 62 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASL 62 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCT
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCC
Confidence 47999999999999999999997 999999999764
No 178
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.71 E-value=9e-08 Score=86.94 Aligned_cols=100 Identities=17% Similarity=0.118 Sum_probs=77.8
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+. +.+ ..++.+.
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l----------------------~~~-----------~~~~~~~ 212 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLL----------------------FQF-----------DPLLSAT 212 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS----------------------TTS-----------CHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccc----------------------ccc-----------CHHHHHH
Confidence 4689999999999999999999999999999876431 000 1256677
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeE-EEEeeCEEEEccCCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIE-EYYSGRFLVVASGETTNPFT 153 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~-~~~~ad~vIlAtG~~~~p~~ 153 (303)
+.+.+++.+++. +++++|++++.++ +...|.+.++ . + +.+|.||+|+| ..|+.
T Consensus 213 l~~~l~~~gv~i--~~~~~v~~i~~~~--~~~~v~~~~G-------~~~-i~~D~vv~a~G--~~p~~ 266 (463)
T 2r9z_A 213 LAENMHAQGIET--HLEFAVAALERDA--QGTTLVAQDG-------TRL-EGFDSVIWAVG--RAPNT 266 (463)
T ss_dssp HHHHHHHTTCEE--ESSCCEEEEEEET--TEEEEEETTC-------CEE-EEESEEEECSC--EEESC
T ss_pred HHHHHHHCCCEE--EeCCEEEEEEEeC--CeEEEEEeCC-------cEE-EEcCEEEECCC--CCcCC
Confidence 777788888766 9999999998765 3467777654 4 7 89999999999 55554
No 179
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.70 E-value=5e-08 Score=88.19 Aligned_cols=33 Identities=30% Similarity=0.455 Sum_probs=31.2
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCC-CCeEEEecC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQS-IPYVILERE 39 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g-~~v~iie~~ 39 (303)
.+||+|||||++|+++|..|+++| .+|+|+|++
T Consensus 23 ~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~ 56 (448)
T 3axb_A 23 RFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAG 56 (448)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccC
Confidence 479999999999999999999999 999999993
No 180
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.68 E-value=3.2e-07 Score=83.97 Aligned_cols=106 Identities=16% Similarity=0.208 Sum_probs=80.5
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHH
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 85 (303)
...+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. . ...++.+
T Consensus 197 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~----------------------~-----------~d~~~~~ 243 (491)
T 3urh_A 197 VPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILG----------------------G-----------MDGEVAK 243 (491)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSS----------------------S-----------SCHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccc----------------------c-----------CCHHHHH
Confidence 357899999999999999999999999999998775310 0 0136777
Q ss_pred HHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCC
Q 022090 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (303)
Q Consensus 86 ~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~ 153 (303)
.+.+.+++.++.. +++++|++++.++ +...+.+.+..++ +..+ +.+|.||+|+| ..|+.
T Consensus 244 ~l~~~l~~~gV~v--~~~~~v~~i~~~~--~~~~v~~~~~~~g--~~~~-i~~D~Vi~a~G--~~p~~ 302 (491)
T 3urh_A 244 QLQRMLTKQGIDF--KLGAKVTGAVKSG--DGAKVTFEPVKGG--EATT-LDAEVVLIATG--RKPST 302 (491)
T ss_dssp HHHHHHHHTTCEE--ECSEEEEEEEEET--TEEEEEEEETTSC--CCEE-EEESEEEECCC--CEECC
T ss_pred HHHHHHHhCCCEE--EECCeEEEEEEeC--CEEEEEEEecCCC--ceEE-EEcCEEEEeeC--CccCC
Confidence 7888888888766 8999999998765 5566777642211 2257 89999999999 55544
No 181
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.67 E-value=1.8e-07 Score=86.31 Aligned_cols=101 Identities=12% Similarity=0.020 Sum_probs=79.5
Q ss_pred CCCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHH
Q 022090 5 AAGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (303)
Q Consensus 5 ~~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 84 (303)
..+.+++|||||+.|+..|..+++.|.+|+++++...+. .+ ..++.
T Consensus 221 ~lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~-----------------------~~-----------D~ei~ 266 (542)
T 4b1b_A 221 KDPGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLR-----------------------GF-----------DQQCA 266 (542)
T ss_dssp SCCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSST-----------------------TS-----------CHHHH
T ss_pred cCCceEEEECCCHHHHHHHHHHHhcCCeEEEeccccccc-----------------------cc-----------chhHH
Confidence 346799999999999999999999999999998754321 00 13677
Q ss_pred HHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCC
Q 022090 85 EHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (303)
Q Consensus 85 ~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~ 153 (303)
+.+.+..++.++.. +++..+..+...+ +...|...++ .+ +.+|.|++|+| .+|+.
T Consensus 267 ~~l~~~l~~~gi~~--~~~~~v~~~~~~~--~~~~v~~~~~-------~~-~~~D~vLvAvG--R~Pnt 321 (542)
T 4b1b_A 267 VKVKLYMEEQGVMF--KNGILPKKLTKMD--DKILVEFSDK-------TS-ELYDTVLYAIG--RKGDI 321 (542)
T ss_dssp HHHHHHHHHTTCEE--EETCCEEEEEEET--TEEEEEETTS-------CE-EEESEEEECSC--EEESC
T ss_pred HHHHHHHHhhccee--ecceEEEEEEecC--CeEEEEEcCC-------Ce-EEEEEEEEccc--ccCCc
Confidence 88888888888766 8999999998876 5666766654 45 78999999999 55554
No 182
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.66 E-value=2.4e-08 Score=90.53 Aligned_cols=47 Identities=15% Similarity=0.280 Sum_probs=40.6
Q ss_pred CCCCCCCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccC
Q 022090 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWK 47 (303)
Q Consensus 1 M~~~~~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~ 47 (303)
|+.+...+||+|||||++||++|..|++.|++|+++|+++.+||.+.
T Consensus 5 ~~~~~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 51 (453)
T 2bcg_G 5 QETIDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAA 51 (453)
T ss_dssp --CCCCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGC
T ss_pred hhhccccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc
Confidence 33444568999999999999999999999999999999999999653
No 183
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.65 E-value=3.3e-07 Score=86.59 Aligned_cols=35 Identities=17% Similarity=0.376 Sum_probs=32.4
Q ss_pred CCcEEEECCcHHHHHHHHHHh---h-CCCCeEEEecCCC
Q 022090 7 GVEVIMVGAGTSGLATAACLS---L-QSIPYVILERENC 41 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~---~-~g~~v~iie~~~~ 41 (303)
.+||+|||||++|+++|..|+ + .|.+|+|+||...
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAV 60 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCC
Confidence 479999999999999999999 6 8999999999874
No 184
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.65 E-value=1.9e-07 Score=89.63 Aligned_cols=38 Identities=34% Similarity=0.476 Sum_probs=35.9
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYAS 44 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg 44 (303)
.+||+|||||++|+++|..|++.|++|+|+|+.+.+||
T Consensus 336 ~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 336 NKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGG 373 (776)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceec
Confidence 57999999999999999999999999999999888877
No 185
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.63 E-value=4.7e-07 Score=82.42 Aligned_cols=107 Identities=14% Similarity=0.194 Sum_probs=78.0
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
+.+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+... . ...++.++
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~---------------------~-----------~~~~~~~~ 225 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGV---------------------G-----------IDMEISKN 225 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCS---------------------S-----------CCHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCc---------------------c-----------cCHHHHHH
Confidence 478999999999999999999999999999998753100 0 01367778
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~ 153 (303)
+.+.+++.+++. +++++|++++.++ ++...+.+.+...+ ...+ +.+|.||+|+| ..|+.
T Consensus 226 l~~~l~~~Gv~i--~~~~~v~~i~~~~-~~~~~v~~~~~~~~--~~~~-i~~D~vv~a~G--~~p~~ 284 (474)
T 1zmd_A 226 FQRILQKQGFKF--KLNTKVTGATKKS-DGKIDVSIEAASGG--KAEV-ITCDVLLVCIG--RRPFT 284 (474)
T ss_dssp HHHHHHHTTCEE--ECSEEEEEEEECT-TSCEEEEEEETTSC--CCEE-EEESEEEECSC--EEECC
T ss_pred HHHHHHHCCCEE--EeCceEEEEEEcC-CceEEEEEEecCCC--CceE-EEcCEEEECcC--CCcCC
Confidence 888888888766 9999999998765 22256665321000 1157 89999999999 55543
No 186
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.63 E-value=2.8e-07 Score=83.66 Aligned_cols=102 Identities=18% Similarity=0.189 Sum_probs=78.0
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
+.+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. +. ...++.++
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l----------------------~~-----------~~~~~~~~ 217 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRAL----------------------PN-----------EDADVSKE 217 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS----------------------TT-----------SCHHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccc----------------------cc-----------cCHHHHHH
Confidence 5789999999999999999999999999999987531 00 01367777
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEe-ecCCCCceeEEEEeeCEEEEccCCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKAS-NLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~-~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~ 153 (303)
+.+..++.+++. +++++|++++.++ +...+.+. ++ +..+ +.+|.||+|+| ..|+.
T Consensus 218 l~~~l~~~gv~i--~~~~~v~~i~~~~--~~~~v~~~~~g-----~~~~-~~~D~vv~a~G--~~p~~ 273 (464)
T 2a8x_A 218 IEKQFKKLGVTI--LTATKVESIADGG--SQVTVTVTKDG-----VAQE-LKAEKVLQAIG--FAPNV 273 (464)
T ss_dssp HHHHHHHHTCEE--ECSCEEEEEEECS--SCEEEEEESSS-----CEEE-EEESEEEECSC--EEECC
T ss_pred HHHHHHHcCCEE--EeCcEEEEEEEcC--CeEEEEEEcCC-----ceEE-EEcCEEEECCC--CCccC
Confidence 888888888766 9999999998754 34556654 32 2257 89999999999 55544
No 187
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.63 E-value=2.7e-08 Score=91.24 Aligned_cols=40 Identities=30% Similarity=0.354 Sum_probs=31.8
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCcc
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIW 46 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w 46 (303)
+++|+|||||++||+||..|+++|++|+|+|+++.+||..
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~ 40 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRA 40 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcE
Confidence 3689999999999999999999999999999999999853
No 188
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.62 E-value=3.2e-08 Score=88.19 Aligned_cols=49 Identities=24% Similarity=0.289 Sum_probs=41.6
Q ss_pred CCCCCCCCcEEEECCcHHHHHHHHHHhhC-CCCeEEEecCCCCCCccCcC
Q 022090 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQ-SIPYVILERENCYASIWKKY 49 (303)
Q Consensus 1 M~~~~~~~~vvIIGaG~aGl~~A~~l~~~-g~~v~iie~~~~~gg~w~~~ 49 (303)
|.++...+||+|||||++|+++|..|++. |.+|+|+|+++.+||.+...
T Consensus 1 m~~m~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~ 50 (399)
T 1v0j_A 1 MQPMTARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSE 50 (399)
T ss_dssp ---CCCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEE
T ss_pred CCcccccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeec
Confidence 55555568999999999999999999999 99999999999999987543
No 189
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.62 E-value=3.4e-07 Score=83.24 Aligned_cols=102 Identities=16% Similarity=0.181 Sum_probs=77.2
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
+.+++|||+|+.|+.+|..|.+.|.+|+++++.+.+.. . ...++.+.
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~----------------------~-----------~d~~~~~~ 220 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAP----------------------T-----------LDEDVTNA 220 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST----------------------T-----------SCHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccc----------------------c-----------CCHHHHHH
Confidence 47899999999999999999999999999998875310 0 01356777
Q ss_pred HHHHH-HHcCCCceeEeCeEEEEEEEeCCCCeEEEEEe--ecCCCCceeEEEEeeCEEEEccCCCCCCCC
Q 022090 87 LDHYV-SHFNIGPSIRYQRSVESASYDEATNMWNVKAS--NLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (303)
Q Consensus 87 l~~~~-~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~--~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~ 153 (303)
+.+.+ ++.+++. +++++|++++.++ +.+.+.+. ++ +..+ +.+|.||+|+| ..|+.
T Consensus 221 l~~~l~~~~gv~i--~~~~~v~~i~~~~--~~~~v~~~~~~g-----~~~~-i~~D~vv~a~G--~~p~~ 278 (468)
T 2qae_A 221 LVGALAKNEKMKF--MTSTKVVGGTNNG--DSVSLEVEGKNG-----KRET-VTCEALLVSVG--RRPFT 278 (468)
T ss_dssp HHHHHHHHTCCEE--ECSCEEEEEEECS--SSEEEEEECC--------EEE-EEESEEEECSC--EEECC
T ss_pred HHHHHhhcCCcEE--EeCCEEEEEEEcC--CeEEEEEEcCCC-----ceEE-EECCEEEECCC--cccCC
Confidence 88888 8888766 9999999998754 34666665 32 2256 89999999999 55543
No 190
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.61 E-value=2.8e-07 Score=83.61 Aligned_cols=171 Identities=13% Similarity=0.085 Sum_probs=87.6
Q ss_pred CCcEEEECCcHHHHHHHHHHhhC--CCCeEEEecCCCCCCccCcCCCCceEE--ecCcccccCCCCCC-----------C
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRL--HLAKQFCQLPHLPF-----------P 71 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~--g~~v~iie~~~~~gg~w~~~~~~~~~~--~~~~~~~~~~~~~~-----------~ 71 (303)
.++|+|||+|.+|+.+|..|.+. +.+|+++++.+.+-. ........ ..+.....+..++. .
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p----~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~ 302 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKP----ADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHN 302 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCB----CCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGG
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcC----ccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhc
Confidence 56899999999999999999999 889999999875310 00000000 00000000000000 0
Q ss_pred CCCCCCCCHHHHHHHHHH-HHHH--cCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCC
Q 022090 72 SSYPMFVSRAQFIEHLDH-YVSH--FNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGET 148 (303)
Q Consensus 72 ~~~~~~~~~~~l~~~l~~-~~~~--~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~ 148 (303)
..+. ..+...+.+.... +.++ ....+.++++++|++++.++ +.|.|.+.+..++ +..+ +.+|.||+|||
T Consensus 303 ~~~~-~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~--~~~~v~~~~~~~g--~~~~-~~~D~Vv~AtG-- 374 (463)
T 3s5w_A 303 TNYS-VVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATA--QGIELALRDAGSG--ELSV-ETYDAVILATG-- 374 (463)
T ss_dssp GTSS-CBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEET--TEEEEEEEETTTC--CEEE-EEESEEEECCC--
T ss_pred cCCC-cCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecC--CEEEEEEEEcCCC--CeEE-EECCEEEEeeC--
Confidence 0000 0001111110111 1111 11234559999999998765 6788888754333 4457 89999999999
Q ss_pred CCCC--CCCCCCccccccCCCCCccEEecccCCCCC-CCCCCeEEEECCC
Q 022090 149 TNPF--TPDIRGLCSFCSSATGTGEVIHSTQYKNGK-PYGGKNVLVVGSG 195 (303)
Q Consensus 149 ~~p~--~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~v~ViG~G 195 (303)
..|+ .+-+.++... .|.+.....+.-.. .....+|.++|..
T Consensus 375 ~~p~~~~~~l~~l~~~------~g~i~v~~~~~~~~~~~~~~~Ifa~G~~ 418 (463)
T 3s5w_A 375 YERQLHRQLLEPLAEY------LGDHEIGRDYRLQTDERCKVAIYAQGFS 418 (463)
T ss_dssp EECCC-CTTTGGGGGG------BC--CCCTTSBCCBCTTBCSEEEESSCC
T ss_pred CCCCCccchhHHHHHH------hCCcccCcccccccCCCCCCeEEEcCCC
Confidence 4444 3334444332 24343434333211 1113568888863
No 191
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.61 E-value=2.9e-07 Score=82.36 Aligned_cols=101 Identities=18% Similarity=0.225 Sum_probs=78.5
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
..+|+|||+|..|+.+|..|.+.|.+|+++++.+.+-. . .....+.++
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~-------------------------------~-~~~~~~~~~ 199 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLA-------------------------------R-VAGEALSEF 199 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT-------------------------------T-TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhh-------------------------------h-hcCHHHHHH
Confidence 57899999999999999999999999999999875310 0 011367788
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPF 152 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~ 152 (303)
+.+..++.|++. ++++.|+++..++ +....|.+.++ .+ +.+|.||+|+| ..|+
T Consensus 200 l~~~l~~~GV~i--~~~~~v~~i~~~~-~~v~~v~l~dG-------~~-i~aD~Vv~a~G--~~p~ 252 (415)
T 3lxd_A 200 YQAEHRAHGVDL--RTGAAMDCIEGDG-TKVTGVRMQDG-------SV-IPADIVIVGIG--IVPC 252 (415)
T ss_dssp HHHHHHHTTCEE--EETCCEEEEEESS-SBEEEEEESSS-------CE-EECSEEEECSC--CEES
T ss_pred HHHHHHhCCCEE--EECCEEEEEEecC-CcEEEEEeCCC-------CE-EEcCEEEECCC--CccC
Confidence 888888888776 8999999998754 22335777664 57 89999999999 5454
No 192
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.60 E-value=1.6e-07 Score=85.66 Aligned_cols=99 Identities=18% Similarity=0.268 Sum_probs=75.7
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHH
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 85 (303)
..++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+... ...++.+
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~---------------------------------~~~~~~~ 231 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGTI---------------------------------YDGDMAE 231 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTSS---------------------------------SCHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhhc---------------------------------CCHHHHH
Confidence 4579999999999999999999999999999987643210 0136777
Q ss_pred HHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCC
Q 022090 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPF 152 (303)
Q Consensus 86 ~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~ 152 (303)
.+.+.+++.+++. +++++|++++.++ ..+.+.+.+ .+ +.+|.||+|+| ..|+
T Consensus 232 ~l~~~l~~~Gv~i--~~~~~v~~i~~~~--~v~~v~~~~--------~~-i~~D~vi~a~G--~~p~ 283 (480)
T 3cgb_A 232 YIYKEADKHHIEI--LTNENVKAFKGNE--RVEAVETDK--------GT-YKADLVLVSVG--VKPN 283 (480)
T ss_dssp HHHHHHHHTTCEE--ECSCCEEEEEESS--BEEEEEETT--------EE-EECSEEEECSC--EEES
T ss_pred HHHHHHHHcCcEE--EcCCEEEEEEcCC--cEEEEEECC--------CE-EEcCEEEECcC--CCcC
Confidence 8888888888766 8899999997642 334454432 57 89999999999 4444
No 193
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.60 E-value=1.2e-07 Score=86.47 Aligned_cols=103 Identities=13% Similarity=0.063 Sum_probs=77.6
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
+.+|+|||||+.|+.+|..|++.|.+|+++++.+.+. +. ...++.+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l----------------------~~-----------~~~~~~~~ 231 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLM----------------------QG-----------ADRDLVKV 231 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSS----------------------TT-----------SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccc----------------------cc-----------cCHHHHHH
Confidence 5789999999999999999999999999999987531 00 01366777
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEee-cCCCCceeEEEEeeCEEEEccCCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASN-LLSPGREIEEYYSGRFLVVASGETTNPFT 153 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~-~~~~~~~~~~~~~ad~vIlAtG~~~~p~~ 153 (303)
+.+..++.+++. +++++|++++.++ +...|.+.+ ...+ .+ +.+|.||+|+| ..|+.
T Consensus 232 l~~~l~~~gV~i--~~~~~v~~i~~~~--~~~~v~~~~~~~~g----~~-~~~D~vv~a~G--~~p~~ 288 (482)
T 1ojt_A 232 WQKQNEYRFDNI--MVNTKTVAVEPKE--DGVYVTFEGANAPK----EP-QRYDAVLVAAG--RAPNG 288 (482)
T ss_dssp HHHHHGGGEEEE--ECSCEEEEEEEET--TEEEEEEESSSCCS----SC-EEESCEEECCC--EEECG
T ss_pred HHHHHHhcCCEE--EECCEEEEEEEcC--CeEEEEEeccCCCc----eE-EEcCEEEECcC--CCcCC
Confidence 778777777665 9999999998765 446676654 1101 45 78999999999 55543
No 194
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.59 E-value=3.1e-07 Score=83.97 Aligned_cols=101 Identities=13% Similarity=0.105 Sum_probs=78.5
Q ss_pred CCcEEEECCcHHHHHHHHHHhhC---CCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQ---SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQF 83 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~---g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 83 (303)
..+++|||+|+.|+.+|..|.+. |.+|+++++.+.+. +.+ ..++
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l----------------------~~~-----------d~~~ 233 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMIL----------------------RGF-----------DSEL 233 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSS----------------------TTS-----------CHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcc----------------------ccc-----------CHHH
Confidence 46899999999999999999999 99999999987531 000 1267
Q ss_pred HHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCC
Q 022090 84 IEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (303)
Q Consensus 84 ~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~ 153 (303)
.+.+.+.+++.++++ +++++|++++.++ ++.+.|.+.++ .+ +.+|.||+|+| ..|+.
T Consensus 234 ~~~l~~~l~~~GV~i--~~~~~v~~i~~~~-~~~~~v~~~~G-------~~-i~~D~vv~a~G--~~p~~ 290 (490)
T 1fec_A 234 RKQLTEQLRANGINV--RTHENPAKVTKNA-DGTRHVVFESG-------AE-ADYDVVMLAIG--RVPRS 290 (490)
T ss_dssp HHHHHHHHHHTTEEE--EETCCEEEEEECT-TSCEEEEETTS-------CE-EEESEEEECSC--EEESC
T ss_pred HHHHHHHHHhCCCEE--EeCCEEEEEEEcC-CCEEEEEECCC-------cE-EEcCEEEEccC--CCcCc
Confidence 778888888888766 9999999998754 23467777653 46 89999999999 55544
No 195
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.59 E-value=2.3e-07 Score=84.38 Aligned_cols=105 Identities=13% Similarity=0.190 Sum_probs=78.4
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
+.+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. . ...++.++
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~----------------------~-----------~~~~~~~~ 223 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVP----------------------T-----------MDAEIRKQ 223 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSST----------------------T-----------SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc----------------------c-----------ccHHHHHH
Confidence 57899999999999999999999999999999875310 0 01367788
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~ 153 (303)
+.+.+++.+++. +++++|++++.++ +...+.+.+..++ +..+ +.+|.||+|+| ..|+.
T Consensus 224 l~~~l~~~gv~i--~~~~~v~~i~~~~--~~~~v~~~~~~~g--~~~~-~~~D~vv~a~G--~~p~~ 281 (470)
T 1dxl_A 224 FQRSLEKQGMKF--KLKTKVVGVDTSG--DGVKLTVEPSAGG--EQTI-IEADVVLVSAG--RTPFT 281 (470)
T ss_dssp HHHHHHHSSCCE--ECSEEEEEEECSS--SSEEEEEEESSSC--CCEE-EEESEEECCCC--EEECC
T ss_pred HHHHHHHcCCEE--EeCCEEEEEEEcC--CeEEEEEEecCCC--cceE-EECCEEEECCC--CCcCC
Confidence 888888888776 9999999997654 3466666521000 1257 89999999999 55543
No 196
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.59 E-value=9.9e-08 Score=86.55 Aligned_cols=101 Identities=15% Similarity=0.148 Sum_probs=75.1
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
..+|+|||||++|+.+|..|++.|.+|+++++.+.+.. . ...++.++
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~----------------------~-----------~~~~~~~~ 217 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILP----------------------T-----------YDSELTAP 217 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSST----------------------T-----------SCHHHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcccc----------------------c-----------cCHHHHHH
Confidence 56899999999999999999999999999999875320 0 01256677
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTP 154 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p 154 (303)
+.+.+++.+++. +++++|++++. + + ..+...++ +..+ +.+|.||+|+| ..|+.+
T Consensus 218 l~~~l~~~gv~i--~~~~~v~~i~~-~--~-v~v~~~~G-----~~~~-i~~D~vv~a~G--~~p~~~ 271 (458)
T 1lvl_A 218 VAESLKKLGIAL--HLGHSVEGYEN-G--C-LLANDGKG-----GQLR-LEADRVLVAVG--RRPRTK 271 (458)
T ss_dssp HHHHHHHHTCEE--ETTCEEEEEET-T--E-EEEECSSS-----CCCE-ECCSCEEECCC--EEECCS
T ss_pred HHHHHHHCCCEE--EECCEEEEEEe-C--C-EEEEECCC-----ceEE-EECCEEEECcC--CCcCCC
Confidence 777778888766 89999999875 3 2 44442122 2246 89999999999 555544
No 197
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.59 E-value=5.8e-07 Score=82.25 Aligned_cols=104 Identities=15% Similarity=0.126 Sum_probs=75.9
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
+.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+... + ..++.+.
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~----------------------~-----------d~~~~~~ 220 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL----------------------Q-----------DEEMKRY 220 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC----------------------C-----------CHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc----------------------C-----------CHHHHHH
Confidence 578999999999999999999999999999998753210 0 1256666
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTP 154 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p 154 (303)
+.+..++. +. +++++.|++++.++ +...+.+.+.++ +..+ +.+|.||+|+| ..|+..
T Consensus 221 l~~~l~~~-V~--i~~~~~v~~i~~~~--~~v~v~~~~~~G---~~~~-i~~D~Vi~a~G--~~p~~~ 277 (492)
T 3ic9_A 221 AEKTFNEE-FY--FDAKARVISTIEKE--DAVEVIYFDKSG---QKTT-ESFQYVLAATG--RKANVD 277 (492)
T ss_dssp HHHHHHTT-SE--EETTCEEEEEEECS--SSEEEEEECTTC---CEEE-EEESEEEECSC--CEESCS
T ss_pred HHHHHhhC-cE--EEECCEEEEEEEcC--CEEEEEEEeCCC---ceEE-EECCEEEEeeC--CccCCC
Confidence 76666654 44 48899999998765 446666652111 2357 89999999999 555543
No 198
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.59 E-value=4.4e-07 Score=82.15 Aligned_cols=101 Identities=14% Similarity=0.148 Sum_probs=77.1
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
..+++|||+|..|+.+|..|.+.|.+|+++++.+.+... . -..++.+.
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-------------------------------~-~d~~~~~~ 194 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPK-------------------------------Y-FDKEMVAE 194 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-------------------------------T-CCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccc-------------------------------c-CCHHHHHH
Confidence 468999999999999999999999999999998753100 0 01367778
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTP 154 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p 154 (303)
+.+.+++.+++. ++++.|++++..+ +...|.+.+ .+ +.+|.||+|+| ..|+..
T Consensus 195 l~~~l~~~GV~i--~~~~~v~~i~~~~--~~v~v~~~~--------g~-i~aD~Vv~A~G--~~p~~~ 247 (452)
T 3oc4_A 195 VQKSLEKQAVIF--HFEETVLGIEETA--NGIVLETSE--------QE-ISCDSGIFALN--LHPQLA 247 (452)
T ss_dssp HHHHHHTTTEEE--EETCCEEEEEECS--SCEEEEESS--------CE-EEESEEEECSC--CBCCCS
T ss_pred HHHHHHHcCCEE--EeCCEEEEEEccC--CeEEEEECC--------CE-EEeCEEEECcC--CCCChH
Confidence 888888888665 8999999998654 345566643 36 89999999999 555443
No 199
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.58 E-value=2.5e-07 Score=82.44 Aligned_cols=101 Identities=19% Similarity=0.176 Sum_probs=77.8
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
..+|+|||+|..|+.+|..|.+.|.+|+++++.+.+... ....++.++
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~--------------------------------~~~~~~~~~ 189 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMAR--------------------------------VVTPEISSY 189 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT--------------------------------TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhh--------------------------------ccCHHHHHH
Confidence 468999999999999999999999999999987643100 011367788
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPF 152 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~ 152 (303)
+.+..++.|++. ++++.|+++..++ +....|.+.++ ++ +.+|.||+|+| ..|+
T Consensus 190 l~~~l~~~GV~i--~~~~~v~~i~~~~-~~v~~V~~~dG-------~~-i~aD~Vv~a~G--~~p~ 242 (404)
T 3fg2_P 190 FHDRHSGAGIRM--HYGVRATEIAAEG-DRVTGVVLSDG-------NT-LPCDLVVVGVG--VIPN 242 (404)
T ss_dssp HHHHHHHTTCEE--ECSCCEEEEEEET-TEEEEEEETTS-------CE-EECSEEEECCC--EEEC
T ss_pred HHHHHHhCCcEE--EECCEEEEEEecC-CcEEEEEeCCC-------CE-EEcCEEEECcC--CccC
Confidence 888888888776 8999999998764 22335666654 57 89999999999 4444
No 200
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.58 E-value=1.1e-07 Score=85.10 Aligned_cols=100 Identities=16% Similarity=0.181 Sum_probs=77.7
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+-... ...++.++
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~--------------------------------~~~~~~~~ 190 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRV--------------------------------LGRRIGAW 190 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHHH--------------------------------HCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchhh--------------------------------cCHHHHHH
Confidence 5789999999999999999999999999999876531000 01366778
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPF 152 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~ 152 (303)
+.+..++.|++. ++++.|++++.++ ....|.+.++ ++ +.+|.||+|+| ..|+
T Consensus 191 l~~~l~~~GV~i--~~~~~v~~i~~~~--~~~~v~~~dg-------~~-i~aD~Vv~a~G--~~p~ 242 (410)
T 3ef6_A 191 LRGLLTELGVQV--ELGTGVVGFSGEG--QLEQVMASDG-------RS-FVADSALICVG--AEPA 242 (410)
T ss_dssp HHHHHHHHTCEE--ECSCCEEEEECSS--SCCEEEETTS-------CE-EECSEEEECSC--EEEC
T ss_pred HHHHHHHCCCEE--EeCCEEEEEeccC--cEEEEEECCC-------CE-EEcCEEEEeeC--Ceec
Confidence 888888888766 8899999997643 4456777664 57 89999999999 4444
No 201
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.58 E-value=8.8e-08 Score=85.87 Aligned_cols=47 Identities=28% Similarity=0.439 Sum_probs=40.4
Q ss_pred CCCCCCCCcEEEECCcHHHHHHHHHHhhCC-CCeEEEecCCCCCCccCc
Q 022090 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQS-IPYVILERENCYASIWKK 48 (303)
Q Consensus 1 M~~~~~~~~vvIIGaG~aGl~~A~~l~~~g-~~v~iie~~~~~gg~w~~ 48 (303)
|+. ...+||+|||||++||++|..|++.| .+|+|+|+++.+||.+..
T Consensus 1 M~~-~~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t 48 (424)
T 2b9w_A 1 MSI-SKDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHS 48 (424)
T ss_dssp -CC-CTTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCC
T ss_pred CCC-CCCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccc
Confidence 642 34689999999999999999999999 899999999999986543
No 202
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.58 E-value=3.7e-07 Score=83.57 Aligned_cols=101 Identities=15% Similarity=0.098 Sum_probs=78.2
Q ss_pred CCcEEEECCcHHHHHHHHHHhhC---CCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQ---SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQF 83 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~---g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 83 (303)
..+++|||+|..|+.+|..|++. |.+|+++++.+.+- +.+ ..++
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l----------------------~~~-----------d~~~ 237 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLIL----------------------RGF-----------DETI 237 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSC----------------------TTS-----------CHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccc----------------------ccc-----------CHHH
Confidence 46899999999999999999999 99999999876531 000 1256
Q ss_pred HHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCC
Q 022090 84 IEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (303)
Q Consensus 84 ~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~ 153 (303)
.+.+.+.+++.++++ +++++|++++.++ ++...|.+.++ .+ +.+|.||+|+| ..|+.
T Consensus 238 ~~~l~~~l~~~GV~i--~~~~~v~~i~~~~-~~~~~v~~~~G-------~~-i~~D~vv~a~G--~~p~~ 294 (495)
T 2wpf_A 238 REEVTKQLTANGIEI--MTNENPAKVSLNT-DGSKHVTFESG-------KT-LDVDVVMMAIG--RIPRT 294 (495)
T ss_dssp HHHHHHHHHHTTCEE--EESCCEEEEEECT-TSCEEEEETTS-------CE-EEESEEEECSC--EEECC
T ss_pred HHHHHHHHHhCCCEE--EeCCEEEEEEEcC-CceEEEEECCC-------cE-EEcCEEEECCC--Ccccc
Confidence 777888888888766 9999999998754 23466777654 46 89999999999 45543
No 203
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.58 E-value=5.3e-07 Score=82.68 Aligned_cols=102 Identities=16% Similarity=0.108 Sum_probs=78.4
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+. +.+ ..++.+.
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l----------------------~~~-----------d~~~~~~ 222 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRIL----------------------RKF-----------DESVINV 222 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSC----------------------TTS-----------CHHHHHH
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccC----------------------ccc-----------chhhHHH
Confidence 5689999999999999999999999999999876531 000 1367778
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~ 153 (303)
+.+..++.+++. +++++|++++.++ ++...|.+.++ + .. +.+|.||+|+| ..|+.
T Consensus 223 l~~~l~~~gv~i--~~~~~v~~i~~~~-~~~~~v~~~~g-----~-~~-~~~D~vi~a~G--~~p~~ 277 (500)
T 1onf_A 223 LENDMKKNNINI--VTFADVVEIKKVS-DKNLSIHLSDG-----R-IY-EHFDHVIYCVG--RSPDT 277 (500)
T ss_dssp HHHHHHHTTCEE--ECSCCEEEEEESS-TTCEEEEETTS-----C-EE-EEESEEEECCC--BCCTT
T ss_pred HHHHHHhCCCEE--EECCEEEEEEEcC-CceEEEEECCC-----c-EE-EECCEEEECCC--CCcCC
Confidence 888888888766 9999999998754 23366776653 2 35 78999999999 55554
No 204
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.58 E-value=2.5e-07 Score=82.56 Aligned_cols=96 Identities=20% Similarity=0.290 Sum_probs=74.7
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
..+|+|||+|..|+.+|..|++.|.+|+++++.+.+... ....++.++
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~--------------------------------~~~~~~~~~ 192 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSR--------------------------------AAPATLADF 192 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT--------------------------------TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc--------------------------------ccCHHHHHH
Confidence 578999999999999999999999999999998753100 001356777
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPF 152 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~ 152 (303)
+.+..++.+++. +++++|++++ + + .|.+.++ .+ +.+|.||+|+| ..|+
T Consensus 193 l~~~l~~~GV~i--~~~~~v~~i~--~--~--~v~~~~g-------~~-i~~D~vi~a~G--~~p~ 240 (408)
T 2gqw_A 193 VARYHAAQGVDL--RFERSVTGSV--D--G--VVLLDDG-------TR-IAADMVVVGIG--VLAN 240 (408)
T ss_dssp HHHHHHHTTCEE--EESCCEEEEE--T--T--EEEETTS-------CE-EECSEEEECSC--EEEC
T ss_pred HHHHHHHcCcEE--EeCCEEEEEE--C--C--EEEECCC-------CE-EEcCEEEECcC--CCcc
Confidence 888888888766 8999999997 3 2 5666553 56 89999999999 4444
No 205
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.57 E-value=3.5e-07 Score=83.12 Aligned_cols=97 Identities=13% Similarity=0.157 Sum_probs=77.0
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+- + ...++.+.
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l----------------------~------------~~~~~~~~ 221 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFF----------------------R------------EDPAIGEA 221 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT----------------------T------------SCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccC----------------------C------------CCHHHHHH
Confidence 5689999999999999999999999999999876421 1 01367788
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPF 152 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~ 152 (303)
+.+.+++.|++. +++++|++++.++ +.+.|.+.+ .+ +.+|.||+|+| ..|+
T Consensus 222 l~~~l~~~Gv~i--~~~~~v~~i~~~~--~~~~v~~~~--------~~-i~aD~Vv~a~G--~~p~ 272 (467)
T 1zk7_A 222 VTAAFRAEGIEV--LEHTQASQVAHMD--GEFVLTTTH--------GE-LRADKLLVATG--RTPN 272 (467)
T ss_dssp HHHHHHHTTCEE--ETTCCEEEEEEET--TEEEEEETT--------EE-EEESEEEECSC--EEES
T ss_pred HHHHHHhCCCEE--EcCCEEEEEEEeC--CEEEEEECC--------cE-EEcCEEEECCC--CCcC
Confidence 888888888766 8999999998754 456666642 57 89999999999 4444
No 206
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.57 E-value=3.6e-07 Score=83.33 Aligned_cols=103 Identities=12% Similarity=0.071 Sum_probs=77.8
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
+.+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. +. -..++.+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l----------------------~~-----------~d~~~~~~ 231 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVL----------------------RK-----------FDECIQNT 231 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSC----------------------TT-----------SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccc----------------------cc-----------cCHHHHHH
Confidence 5789999999999999999999999999999887531 00 01356777
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~ 153 (303)
+.+.+++.|++. +++++|++++.+++.....|.+.++ + .+ +.+|.||+|+| ..|+.
T Consensus 232 l~~~l~~~Gv~i--~~~~~v~~i~~~~~~~~~~v~~~~G-----~-~~-i~~D~vv~a~G--~~p~~ 287 (479)
T 2hqm_A 232 ITDHYVKEGINV--HKLSKIVKVEKNVETDKLKIHMNDS-----K-SI-DDVDELIWTIG--RKSHL 287 (479)
T ss_dssp HHHHHHHHTCEE--ECSCCEEEEEECC-CCCEEEEETTS-----C-EE-EEESEEEECSC--EEECC
T ss_pred HHHHHHhCCeEE--EeCCEEEEEEEcCCCcEEEEEECCC-----c-EE-EEcCEEEECCC--CCCcc
Confidence 888888888766 9999999998754221356666543 1 46 89999999999 55554
No 207
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.57 E-value=8e-07 Score=80.98 Aligned_cols=108 Identities=13% Similarity=0.013 Sum_probs=79.3
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
+.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+. +.+ ..++.++
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l----------------------~~~-----------d~~~~~~ 233 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL----------------------RSF-----------DSMISTN 233 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC----------------------TTS-----------CHHHHHH
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc----------------------ccc-----------CHHHHHH
Confidence 4789999999999999999999999999999876431 000 1367778
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCcee--EEEEeeCEEEEccCCCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREI--EEYYSGRFLVVASGETTNPFTP 154 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~--~~~~~ad~vIlAtG~~~~p~~p 154 (303)
+.+.+++.+++. ++++.|++++..++.....+.+.+...+ +. .+ +.+|.||+|+| ..|+..
T Consensus 234 ~~~~l~~~gv~i--~~~~~v~~i~~~~~~~~~~v~~~~~~~g--~~~g~~-~~~D~vi~a~G--~~p~~~ 296 (478)
T 3dk9_A 234 CTEELENAGVEV--LKFSQVKEVKKTLSGLEVSMVTAVPGRL--PVMTMI-PDVDCLLWAIG--RVPNTK 296 (478)
T ss_dssp HHHHHHHTTCEE--ETTEEEEEEEECSSSEEEEEEECCTTSC--CEEEEE-EEESEEEECSC--EEESCT
T ss_pred HHHHHHHCCCEE--EeCCEEEEEEEcCCCcEEEEEEccCCCC--cccceE-EEcCEEEEeec--cccCCC
Confidence 888888888766 8999999998764221355666543211 11 56 89999999999 555443
No 208
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.57 E-value=3.5e-07 Score=82.31 Aligned_cols=102 Identities=13% Similarity=0.172 Sum_probs=76.4
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. .. ...++.++
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~-------------------------------~~-~~~~~~~~ 196 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLE-------------------------------RV-TAPPVSAF 196 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTT-------------------------------TT-SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccc-------------------------------ch-hhHHHHHH
Confidence 57899999999999999999999999999998764210 00 01356777
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEe-CCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYD-EATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPF 152 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~-~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~ 152 (303)
+.+.+++.|++. +++++|++++.. +++....|.+.++ .+ +.+|.||+|+| ..|+
T Consensus 197 l~~~l~~~GV~i--~~~~~v~~i~~~~~~~~v~~v~~~~G-------~~-i~~D~Vv~a~G--~~p~ 251 (431)
T 1q1r_A 197 YEHLHREAGVDI--RTGTQVCGFEMSTDQQKVTAVLCEDG-------TR-LPADLVIAGIG--LIPN 251 (431)
T ss_dssp HHHHHHHHTCEE--ECSCCEEEEEECTTTCCEEEEEETTS-------CE-EECSEEEECCC--EEEC
T ss_pred HHHHHHhCCeEE--EeCCEEEEEEeccCCCcEEEEEeCCC-------CE-EEcCEEEECCC--CCcC
Confidence 788888888766 899999999862 2123345666654 56 89999999999 4443
No 209
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.57 E-value=3.9e-07 Score=84.03 Aligned_cols=100 Identities=13% Similarity=0.102 Sum_probs=77.6
Q ss_pred CcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHHH
Q 022090 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEHL 87 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 87 (303)
.+++|||+|..|+.+|..|.+.|.+|+++++.+.+. +. ...++.+++
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l----------------------~~-----------~~~~~~~~l 261 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLK----------------------LI-----------KDNETRAYV 261 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT----------------------TC-----------CSHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccc----------------------cc-----------ccHHHHHHH
Confidence 789999999999999999999999999999887431 00 013677888
Q ss_pred HHHHHHcCCCceeEeCeEEEEEEEeCCCCe---EEEEEeecCCCCceeE-EEEeeCEEEEccCCCCCCCC
Q 022090 88 DHYVSHFNIGPSIRYQRSVESASYDEATNM---WNVKASNLLSPGREIE-EYYSGRFLVVASGETTNPFT 153 (303)
Q Consensus 88 ~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~---~~v~~~~~~~~~~~~~-~~~~ad~vIlAtG~~~~p~~ 153 (303)
.+.+++.|++. +++++|++++.++ ++. +.|.+.++ . + +.+|.||+|+| ..|+.
T Consensus 262 ~~~l~~~GV~i--~~~~~V~~i~~~~-~~~v~~~~v~~~~G-------~~~-i~aD~Vv~A~G--~~p~~ 318 (523)
T 1mo9_A 262 LDRMKEQGMEI--ISGSNVTRIEEDA-NGRVQAVVAMTPNG-------EMR-IETDFVFLGLG--EQPRS 318 (523)
T ss_dssp HHHHHHTTCEE--ESSCEEEEEEECT-TSBEEEEEEEETTE-------EEE-EECSCEEECCC--CEECC
T ss_pred HHHHHhCCcEE--EECCEEEEEEEcC-CCceEEEEEEECCC-------cEE-EEcCEEEECcC--CccCC
Confidence 88888888766 9999999998754 222 56666543 3 7 89999999999 44443
No 210
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.56 E-value=4e-07 Score=83.48 Aligned_cols=100 Identities=15% Similarity=0.171 Sum_probs=77.5
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. +. ...++.+.
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l----------------------~~-----------~d~~~~~~ 228 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVL----------------------PY-----------EDADAALV 228 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSS----------------------CC-----------SSHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc----------------------cc-----------cCHHHHHH
Confidence 4789999999999999999999999999999887531 00 01267778
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~ 153 (303)
+.+.+++.|+++ +++++|++++.++ +...|...++ .+ +.+|.||+|+| ..|+.
T Consensus 229 l~~~l~~~GV~i--~~~~~V~~i~~~~--~~v~v~~~~g-------~~-i~aD~Vv~a~G--~~p~~ 281 (499)
T 1xdi_A 229 LEESFAERGVRL--FKNARAASVTRTG--AGVLVTMTDG-------RT-VEGSHALMTIG--SVPNT 281 (499)
T ss_dssp HHHHHHHTTCEE--ETTCCEEEEEECS--SSEEEEETTS-------CE-EEESEEEECCC--EEECC
T ss_pred HHHHHHHCCCEE--EeCCEEEEEEEeC--CEEEEEECCC-------cE-EEcCEEEECCC--CCcCC
Confidence 888888888766 9999999998754 3455655443 57 89999999999 54543
No 211
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.56 E-value=6.4e-07 Score=81.57 Aligned_cols=104 Identities=17% Similarity=0.185 Sum_probs=79.2
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHH
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 85 (303)
.+.+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. +. ...++.+
T Consensus 179 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l----------------------~~-----------~~~~~~~ 225 (476)
T 3lad_A 179 VPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFL----------------------PA-----------VDEQVAK 225 (476)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS----------------------TT-----------SCHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcC----------------------cc-----------cCHHHHH
Confidence 35689999999999999999999999999999987531 00 0136777
Q ss_pred HHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCC
Q 022090 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (303)
Q Consensus 86 ~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~ 153 (303)
.+.+.+++.+++. +++++|++++.++ +...+.+.++++ ..+ +.+|.||+|+| ..|+.
T Consensus 226 ~l~~~l~~~Gv~v--~~~~~v~~i~~~~--~~~~v~~~~~~g----~~~-~~~D~vi~a~G--~~p~~ 282 (476)
T 3lad_A 226 EAQKILTKQGLKI--LLGARVTGTEVKN--KQVTVKFVDAEG----EKS-QAFDKLIVAVG--RRPVT 282 (476)
T ss_dssp HHHHHHHHTTEEE--EETCEEEEEEECS--SCEEEEEESSSE----EEE-EEESEEEECSC--EEECC
T ss_pred HHHHHHHhCCCEE--EECCEEEEEEEcC--CEEEEEEEeCCC----cEE-EECCEEEEeeC--CcccC
Confidence 7888888888665 8999999998765 456676665321 146 89999999999 55544
No 212
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.55 E-value=1.4e-06 Score=79.56 Aligned_cols=104 Identities=19% Similarity=0.103 Sum_probs=79.0
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
+.+++|||+|+.|+.+|..|++.|.+|+++++...+ +.+ ..++.+.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l-----------------------~~~-----------d~~~~~~ 232 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVL-----------------------RGF-----------DQQMAEL 232 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSS-----------------------TTS-----------CHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCC-----------------------ccc-----------CHHHHHH
Confidence 568999999999999999999999999999874321 000 1367788
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPF 152 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~ 152 (303)
+.+.+++.+++. ++++.|++++..+ ++...|.+.++.++ +..+ +.+|.||+|+| ..|+
T Consensus 233 l~~~l~~~Gv~i--~~~~~v~~i~~~~-~~~~~v~~~~~~~~--~~~~-~~~D~vi~a~G--~~p~ 290 (483)
T 3dgh_A 233 VAASMEERGIPF--LRKTVPLSVEKQD-DGKLLVKYKNVETG--EESE-DVYDTVLWAIG--RKGL 290 (483)
T ss_dssp HHHHHHHTTCCE--EETEEEEEEEECT-TSCEEEEEEETTTC--CEEE-EEESEEEECSC--EEEC
T ss_pred HHHHHHhCCCEE--EeCCEEEEEEEcC-CCcEEEEEecCCCC--ceeE-EEcCEEEECcc--cccC
Confidence 888888888876 9999999998754 23466777665322 2357 89999999999 4444
No 213
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.54 E-value=1.7e-06 Score=79.12 Aligned_cols=105 Identities=15% Similarity=0.023 Sum_probs=78.7
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
+.+++|||+|+.|+.+|..|++.|.+|+++++...+. .+ ..++.+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l~-----------------------~~-----------d~~~~~~ 230 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLR-----------------------GF-----------DQQMSSL 230 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSST-----------------------TS-----------CHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCcccc-----------------------cC-----------CHHHHHH
Confidence 4689999999999999999999999999998854210 00 1367788
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~ 153 (303)
+.+..++.+++. ++++.+.++...+ ++...+.+.+..++ +..+ +.+|.||+|+| ..|+.
T Consensus 231 l~~~l~~~gv~~--~~~~~v~~i~~~~-~~~~~v~~~~~~~g--~~~~-~~~D~vi~a~G--~~p~~ 289 (488)
T 3dgz_A 231 VTEHMESHGTQF--LKGCVPSHIKKLP-TNQLQVTWEDHASG--KEDT-GTFDTVLWAIG--RVPET 289 (488)
T ss_dssp HHHHHHHTTCEE--EETEEEEEEEECT-TSCEEEEEEETTTT--EEEE-EEESEEEECSC--EEESC
T ss_pred HHHHHHHCCCEE--EeCCEEEEEEEcC-CCcEEEEEEeCCCC--eeEE-EECCEEEEccc--CCccc
Confidence 888888888776 8999999998754 24466766653322 3346 78999999999 55543
No 214
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.54 E-value=4.5e-07 Score=82.06 Aligned_cols=101 Identities=14% Similarity=0.126 Sum_probs=75.2
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+-.. . ...++.+.
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~---------------------~-----------~~~~~~~~ 196 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYK---------------------Y-----------FDKEFTDI 196 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTT---------------------T-----------SCHHHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhh---------------------h-----------hhhhHHHH
Confidence 468999999999999999999999999999987643100 0 01367778
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~ 153 (303)
+.+.+++.|++. +++++|++++..+ +.......++ .+ +.+|.||+|+| ..|+.
T Consensus 197 l~~~l~~~Gv~i--~~~~~v~~i~~~~--~~v~~v~~~g-------~~-i~~D~vv~a~G--~~p~~ 249 (452)
T 2cdu_A 197 LAKDYEAHGVNL--VLGSKVAAFEEVD--DEIITKTLDG-------KE-IKSDIAILCIG--FRPNT 249 (452)
T ss_dssp HHHHHHHTTCEE--EESSCEEEEEEET--TEEEEEETTS-------CE-EEESEEEECCC--EEECC
T ss_pred HHHHHHHCCCEE--EcCCeeEEEEcCC--CeEEEEEeCC-------CE-EECCEEEECcC--CCCCH
Confidence 888888888766 9999999998643 3333222232 56 89999999999 55543
No 215
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.53 E-value=4.9e-07 Score=82.26 Aligned_cols=97 Identities=14% Similarity=0.168 Sum_probs=76.6
Q ss_pred CCcEEEECCcHHHHHHHHHHhhC-CCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQ-SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~-g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 85 (303)
..+++|||+|+.|+.+|..|.+. |.+|+++++.+.+... . ...++.+
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~---------------------~-----------~~~~~~~ 206 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPG---------------------F-----------TSKSLSQ 206 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTT---------------------T-----------SCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCccccc---------------------c-----------cCHHHHH
Confidence 57899999999999999999999 9999999987643100 0 0136778
Q ss_pred HHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCC
Q 022090 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (303)
Q Consensus 86 ~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~ 147 (303)
.+.+.+++.+++. +++++|++++.++ +...+.+.++ ++ +.+|.||+|+|.
T Consensus 207 ~l~~~l~~~GV~i--~~~~~v~~i~~~~--~~v~v~~~~g-------~~-i~aD~Vv~a~G~ 256 (472)
T 3iwa_A 207 MLRHDLEKNDVVV--HTGEKVVRLEGEN--GKVARVITDK-------RT-LDADLVILAAGV 256 (472)
T ss_dssp HHHHHHHHTTCEE--ECSCCEEEEEESS--SBEEEEEESS-------CE-EECSEEEECSCE
T ss_pred HHHHHHHhcCCEE--EeCCEEEEEEccC--CeEEEEEeCC-------CE-EEcCEEEECCCC
Confidence 8888888888766 8999999998744 4566777654 47 899999999993
No 216
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.52 E-value=4.8e-07 Score=82.60 Aligned_cols=100 Identities=20% Similarity=0.270 Sum_probs=78.5
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. +.+ ..++.+.
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l----------------------~~~-----------~~~~~~~ 237 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLIL----------------------RNF-----------DYDLRQL 237 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS----------------------TTS-----------CHHHHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccc----------------------ccc-----------CHHHHHH
Confidence 5689999999999999999999999999999876431 000 1356777
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~ 153 (303)
+.+.+++.++.. ++++.|++++.++ +.+.|.+.++ .+ +.+|.||+|+| ..|+.
T Consensus 238 l~~~l~~~Gv~i--~~~~~V~~i~~~~--~~v~v~~~~g-------~~-i~aD~Vi~A~G--~~p~~ 290 (484)
T 3o0h_A 238 LNDAMVAKGISI--IYEATVSQVQSTE--NCYNVVLTNG-------QT-ICADRVMLATG--RVPNT 290 (484)
T ss_dssp HHHHHHHHTCEE--ESSCCEEEEEECS--SSEEEEETTS-------CE-EEESEEEECCC--EEECC
T ss_pred HHHHHHHCCCEE--EeCCEEEEEEeeC--CEEEEEECCC-------cE-EEcCEEEEeeC--CCcCC
Confidence 888888888766 8999999998765 4567777654 46 89999999999 44443
No 217
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.51 E-value=4.2e-07 Score=83.15 Aligned_cols=101 Identities=16% Similarity=0.254 Sum_probs=75.1
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHH
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 85 (303)
...+|+|||+|+.|+.+|..|++.|.+|+++++.+.+-.. . ...++.+
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-------------------------------~-~~~~~~~ 240 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAG-------------------------------Y-YDRDLTD 240 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT-------------------------------T-SCHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhh-------------------------------H-HHHHHHH
Confidence 4578999999999999999999999999999998653100 0 0136777
Q ss_pred HHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCC
Q 022090 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (303)
Q Consensus 86 ~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~ 153 (303)
.+.+.+++.+++. +++++|++++.++ ....+.+ ++ .+ +.+|.||+|+| ..|+.
T Consensus 241 ~l~~~l~~~GV~i--~~~~~v~~i~~~~--~v~~v~~-~g-------~~-i~~D~Vi~a~G--~~p~~ 293 (490)
T 2bc0_A 241 LMAKNMEEHGIQL--AFGETVKEVAGNG--KVEKIIT-DK-------NE-YDVDMVILAVG--FRPNT 293 (490)
T ss_dssp HHHHHHHTTTCEE--EETCCEEEEECSS--SCCEEEE-SS-------CE-EECSEEEECCC--EEECC
T ss_pred HHHHHHHhCCeEE--EeCCEEEEEEcCC--cEEEEEE-CC-------cE-EECCEEEECCC--CCcCh
Confidence 8888888888766 9999999997522 2223444 32 46 89999999999 55543
No 218
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.50 E-value=6.9e-07 Score=83.15 Aligned_cols=98 Identities=18% Similarity=0.201 Sum_probs=75.7
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
..+|+|||+|..|+.+|..|++.|.+|+++++.+.+. +. ...++.+.
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l----------------------~~-----------~~~~~~~~ 197 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVM----------------------TP-----------VDREMAGF 197 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSC----------------------TT-----------SCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccc----------------------hh-----------cCHHHHHH
Confidence 4689999999999999999999999999999976421 00 01366777
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeC-----------------CCCeEEEEEeecCCCCceeEEEEeeCEEEEccCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDE-----------------ATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~-----------------~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~ 147 (303)
+.+.+++.+++. ++++.|++++.+. ..+...+...++ .+ +.+|.||+|+|.
T Consensus 198 l~~~l~~~GV~i--~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-------~~-i~~D~vi~a~G~ 265 (565)
T 3ntd_A 198 AHQAIRDQGVDL--RLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNG-------EL-LETDLLIMAIGV 265 (565)
T ss_dssp HHHHHHHTTCEE--EETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTS-------CE-EEESEEEECSCE
T ss_pred HHHHHHHCCCEE--EeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCC-------CE-EEcCEEEECcCC
Confidence 888888888766 8999999998741 134556666543 47 899999999993
No 219
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.46 E-value=1.4e-06 Score=74.83 Aligned_cols=103 Identities=22% Similarity=0.271 Sum_probs=74.6
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
..+|+|||+|..|+.+|..|.+.|.+|+++++.+.+. ....+.+.
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-----------------------------------~~~~~~~~ 189 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR-----------------------------------AEKILIKR 189 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC-----------------------------------CCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccc-----------------------------------cCHHHHHH
Confidence 4689999999999999999999999999999876421 01245566
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCC-CCceeEEEEeeCEEEEccCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLS-PGREIEEYYSGRFLVVASGETTNPF 152 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~-~~~~~~~~~~ad~vIlAtG~~~~p~ 152 (303)
+.+.+++.+++. +++++|+++..++ +....|.+.+..+ + +..+ +.+|.||+|+| ..|+
T Consensus 190 l~~~l~~~gv~i--~~~~~v~~i~~~~-~~v~~v~~~~~~~~g--~~~~-i~~D~vv~a~G--~~p~ 248 (320)
T 1trb_A 190 LMDKVENGNIIL--HTNRTLEEVTGDQ-MGVTGVRLRDTQNSD--NIES-LDVAGLFVAIG--HSPN 248 (320)
T ss_dssp HHHHHHTSSEEE--ECSCEEEEEEECS-SSEEEEEEECCTTCC--CCEE-EECSEEEECSC--EEES
T ss_pred HHHhcccCCeEE--EcCceeEEEEcCC-CceEEEEEEeccCCC--ceEE-EEcCEEEEEeC--CCCC
Confidence 666667677655 8999999998654 2333466654211 1 2257 89999999999 4444
No 220
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.44 E-value=4.3e-06 Score=76.95 Aligned_cols=106 Identities=19% Similarity=0.108 Sum_probs=75.6
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
+.+++|||+|+.|+.+|..|++.|.+|+++++...+ +.+ ..++.+.
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~l-----------------------~~~-----------d~~~~~~ 255 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILL-----------------------RGF-----------DQDMANK 255 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSS-----------------------TTS-----------CHHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEeccccc-----------------------ccC-----------CHHHHHH
Confidence 467999999999999999999999999999975321 000 1367778
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCC--CCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEA--TNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~--~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~ 153 (303)
+.+..++.++.+ ++++.++++...+. .+...+.....++. +..+ +.+|.||+|+| ..|+.
T Consensus 256 ~~~~l~~~GV~v--~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~--~~~~-~~~D~vi~a~G--~~p~~ 317 (519)
T 3qfa_A 256 IGEHMEEHGIKF--IRQFVPIKVEQIEAGTPGRLRVVAQSTNSE--EIIE-GEYNTVMLAIG--RDACT 317 (519)
T ss_dssp HHHHHHHTTCEE--EESEEEEEEEEEECCTTCEEEEEEEESSSS--CEEE-EEESEEEECSC--EEESC
T ss_pred HHHHHHHCCCEE--EeCCeEEEEEEccCCCCceEEEEEEECCCc--EEEE-EECCEEEEecC--CcccC
Confidence 888888888776 88988888876432 23455555432221 2246 78999999999 55544
No 221
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.44 E-value=4.5e-07 Score=81.71 Aligned_cols=95 Identities=15% Similarity=0.190 Sum_probs=72.9
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
..+++|||||+.|+.+|..|++.|.+|+++++.+.+... + ..++.+.
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~----------------------~-----------d~~~~~~ 193 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKL----------------------M-----------DADMNQP 193 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTT----------------------S-----------CGGGGHH
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeecccccc----------------------c-----------cchhHHH
Confidence 468999999999999999999999999999998753210 0 0145566
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPF 152 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~ 152 (303)
+.+..++.++.. +++++|++++.. .+.+.++ ++ +.+|.|++|+| ..|+
T Consensus 194 ~~~~l~~~gV~i--~~~~~v~~~~~~------~v~~~~g-------~~-~~~D~vl~a~G--~~Pn 241 (437)
T 4eqs_A 194 ILDELDKREIPY--RLNEEINAINGN------EITFKSG-------KV-EHYDMIIEGVG--THPN 241 (437)
T ss_dssp HHHHHHHTTCCE--EESCCEEEEETT------EEEETTS-------CE-EECSEEEECCC--EEES
T ss_pred HHHHhhccceEE--EeccEEEEecCC------eeeecCC-------eE-EeeeeEEEEec--eecC
Confidence 777778888777 899999887532 3566554 56 89999999999 5554
No 222
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.44 E-value=2e-07 Score=82.55 Aligned_cols=43 Identities=23% Similarity=0.309 Sum_probs=39.9
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCc
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK 48 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~ 48 (303)
..+||+|||||++|+++|..|++.|.+|+|+|+++.+||.|..
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~ 70 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYD 70 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCC
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccce
Confidence 3579999999999999999999999999999999999998764
No 223
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.43 E-value=1.2e-07 Score=87.22 Aligned_cols=40 Identities=28% Similarity=0.422 Sum_probs=37.5
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCC-CCeEEEecCCCCCCcc
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQS-IPYVILERENCYASIW 46 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g-~~v~iie~~~~~gg~w 46 (303)
.+||+|||||++||+||..|++.| .+|+|+|+++.+||.+
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~ 48 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRL 48 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCce
Confidence 479999999999999999999999 9999999999999854
No 224
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.42 E-value=3.7e-07 Score=83.32 Aligned_cols=43 Identities=19% Similarity=0.355 Sum_probs=39.8
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCC-CCeEEEecCCCCCCccCc
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQS-IPYVILERENCYASIWKK 48 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g-~~v~iie~~~~~gg~w~~ 48 (303)
..+||+|||||++||++|..|++.| .+|+|+|+++.+||.|..
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~ 51 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRS 51 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCE
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeee
Confidence 4689999999999999999999998 799999999999998765
No 225
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.42 E-value=1.1e-06 Score=80.34 Aligned_cols=101 Identities=15% Similarity=0.100 Sum_probs=75.0
Q ss_pred CCcEEEECCcHHHHHHHHHHhh----CCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSL----QSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQ 82 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~----~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (303)
..+|+|||||+.|+.+|..|++ .|.+|+++++.+...+ ... ..+
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~-------------------------------~~l-~~~ 227 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMG-------------------------------KIL-PEY 227 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTT-------------------------------TTS-CHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccccc-------------------------------ccC-CHH
Confidence 4689999999999999999987 4789999987653110 000 135
Q ss_pred HHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCC
Q 022090 83 FIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (303)
Q Consensus 83 l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~ 153 (303)
+.+++.+..++.|+.. ++++.|++++.++ +...|.+.++ .+ +.+|.||+|+| ..|+.
T Consensus 228 ~~~~~~~~l~~~GV~v--~~~~~V~~i~~~~--~~~~v~l~dG-------~~-i~aD~Vv~a~G--~~pn~ 284 (493)
T 1m6i_A 228 LSNWTMEKVRREGVKV--MPNAIVQSVGVSS--GKLLIKLKDG-------RK-VETDHIVAAVG--LEPNV 284 (493)
T ss_dssp HHHHHHHHHHTTTCEE--ECSCCEEEEEEET--TEEEEEETTS-------CE-EEESEEEECCC--EEECC
T ss_pred HHHHHHHHHHhcCCEE--EeCCEEEEEEecC--CeEEEEECCC-------CE-EECCEEEECCC--CCccH
Confidence 6777788888888766 8999999998654 4456766654 57 89999999999 44443
No 226
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.41 E-value=2.6e-07 Score=84.10 Aligned_cols=41 Identities=34% Similarity=0.447 Sum_probs=37.0
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCcc
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIW 46 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w 46 (303)
..+||+|||||++||++|..|++.|++|+|+|+++.+||..
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~ 55 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAV 55 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCcee
Confidence 45799999999999999999999999999999999999843
No 227
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.38 E-value=3.1e-07 Score=84.16 Aligned_cols=41 Identities=29% Similarity=0.428 Sum_probs=38.2
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWK 47 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~ 47 (303)
.+||+|||||++||++|..|++.|++|+|+|+++.+||.+.
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~ 53 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLR 53 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCcee
Confidence 47999999999999999999999999999999999998653
No 228
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.37 E-value=3.3e-06 Score=72.94 Aligned_cols=102 Identities=14% Similarity=0.080 Sum_probs=73.9
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
..+|+|||+|..|+.+|..|.+.|.+|+++++.+.+. ....+.+.
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~-----------------------------------~~~~~~~~ 196 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFR-----------------------------------AHEASVKE 196 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCC-----------------------------------SCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccC-----------------------------------ccHHHHHH
Confidence 4689999999999999999999999999999876421 01245566
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPF 152 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~ 152 (303)
+.+..++.+++. ++++.|.+++.++ +...|.+....++ +..+ +.+|.||+|+| ..|+
T Consensus 197 l~~~l~~~gv~v--~~~~~v~~i~~~~--~~~~v~~~~~~~g--~~~~-i~~D~vi~a~G--~~p~ 253 (335)
T 2zbw_A 197 LMKAHEEGRLEV--LTPYELRRVEGDE--RVRWAVVFHNQTQ--EELA-LEVDAVLILAG--YITK 253 (335)
T ss_dssp HHHHHHTTSSEE--ETTEEEEEEEESS--SEEEEEEEETTTC--CEEE-EECSEEEECCC--EEEE
T ss_pred HHhccccCCeEE--ecCCcceeEccCC--CeeEEEEEECCCC--ceEE-EecCEEEEeec--CCCC
Confidence 666677667665 8999999998742 3335666521111 2257 89999999999 4444
No 229
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.37 E-value=3e-07 Score=84.74 Aligned_cols=40 Identities=30% Similarity=0.420 Sum_probs=37.3
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCcc
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIW 46 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w 46 (303)
.+||+|||||++||+||..|++.|++|+|+|+++.+||..
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~ 43 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRT 43 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTC
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCce
Confidence 4799999999999999999999999999999999998853
No 230
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.37 E-value=3.6e-07 Score=83.46 Aligned_cols=41 Identities=22% Similarity=0.287 Sum_probs=38.1
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCcc
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIW 46 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w 46 (303)
..+||+|||||++||++|..|++.|++|+|+|+++.+||.+
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~ 50 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRV 50 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCce
Confidence 46799999999999999999999999999999999999853
No 231
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.37 E-value=2.5e-06 Score=77.42 Aligned_cols=100 Identities=14% Similarity=0.130 Sum_probs=76.8
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. +.+ ..++.+.
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l----------------------~~~-----------~~~~~~~ 216 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEIL----------------------SRF-----------DQDMRRG 216 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS----------------------TTS-----------CHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc----------------------ccc-----------CHHHHHH
Confidence 5789999999999999999999999999999876421 000 1367778
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEE-EeecCCCCceeEEEEeeCEEEEccCCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVK-ASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~-~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~ 153 (303)
+.+.+++.+++. ++++.|++++.++ ++...|. +.+ .+ +.+|.||+|+| ..|+.
T Consensus 217 l~~~l~~~Gv~i--~~~~~v~~i~~~~-~~~~~v~~~~~--------g~-i~aD~Vv~a~G--~~p~~ 270 (463)
T 4dna_A 217 LHAAMEEKGIRI--LCEDIIQSVSADA-DGRRVATTMKH--------GE-IVADQVMLALG--RMPNT 270 (463)
T ss_dssp HHHHHHHTTCEE--ECSCCEEEEEECT-TSCEEEEESSS--------CE-EEESEEEECSC--EEESC
T ss_pred HHHHHHHCCCEE--ECCCEEEEEEEcC-CCEEEEEEcCC--------Ce-EEeCEEEEeeC--cccCC
Confidence 888888888766 8999999998764 2335566 544 35 78999999999 44443
No 232
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.35 E-value=6.8e-07 Score=78.63 Aligned_cols=92 Identities=17% Similarity=0.230 Sum_probs=72.0
Q ss_pred CcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHHH
Q 022090 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEHL 87 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 87 (303)
.+++|||+|+.|+.+|..|++.|.+|+++++.+.+. + -..++.+++
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l----------------------~------------~~~~~~~~l 189 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFL----------------------G------------LDEELSNMI 189 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCT----------------------T------------CCHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeec----------------------c------------CCHHHHHHH
Confidence 689999999999999999999999999999887531 0 013677888
Q ss_pred HHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCC
Q 022090 88 DHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPF 152 (303)
Q Consensus 88 ~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~ 152 (303)
.+..++.+++. +++++|++++ . . .|.+.+ .+ +++|.||+|+| ..|+
T Consensus 190 ~~~l~~~gV~i--~~~~~v~~i~--~--~--~v~~~~--------g~-i~~D~vi~a~G--~~p~ 235 (367)
T 1xhc_A 190 KDMLEETGVKF--FLNSELLEAN--E--E--GVLTNS--------GF-IEGKVKICAIG--IVPN 235 (367)
T ss_dssp HHHHHHTTEEE--ECSCCEEEEC--S--S--EEEETT--------EE-EECSCEEEECC--EEEC
T ss_pred HHHHHHCCCEE--EcCCEEEEEE--e--e--EEEECC--------CE-EEcCEEEECcC--CCcC
Confidence 88888888766 8899998886 2 1 355554 35 78999999999 5444
No 233
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.32 E-value=4e-07 Score=82.83 Aligned_cols=39 Identities=28% Similarity=0.371 Sum_probs=36.4
Q ss_pred CcEEEECCcHHHHHHHHHHhhCCC--CeEEEecCCCCCCcc
Q 022090 8 VEVIMVGAGTSGLATAACLSLQSI--PYVILERENCYASIW 46 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~g~--~v~iie~~~~~gg~w 46 (303)
+||+|||||++||++|..|+++|. +|+|+|+++.+||..
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~ 43 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWI 43 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTC
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCce
Confidence 699999999999999999999999 999999999888744
No 234
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.31 E-value=5.3e-07 Score=82.53 Aligned_cols=41 Identities=27% Similarity=0.302 Sum_probs=38.3
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCcc
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIW 46 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w 46 (303)
.++||+|||||++||++|..|++.|.+|+|+|+++.+||.+
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~ 72 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRV 72 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCce
Confidence 46799999999999999999999999999999999999864
No 235
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.31 E-value=6.1e-07 Score=81.06 Aligned_cols=41 Identities=29% Similarity=0.383 Sum_probs=38.0
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWK 47 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~ 47 (303)
.+||+|||||++||++|..|++.|++|+|+|+++.+||.+.
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~ 45 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTW 45 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCcee
Confidence 47999999999999999999999999999999999988653
No 236
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.30 E-value=5.8e-07 Score=79.55 Aligned_cols=41 Identities=20% Similarity=0.268 Sum_probs=38.8
Q ss_pred CcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCc
Q 022090 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK 48 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~ 48 (303)
+||+|||||++|+++|..|++.|.+|+|+|+++.+||.|..
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~ 44 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYD 44 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCcccc
Confidence 69999999999999999999999999999999999998764
No 237
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.30 E-value=1.7e-06 Score=80.87 Aligned_cols=94 Identities=14% Similarity=0.204 Sum_probs=73.4
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
..+|+|||+|..|+.+|..|++.|.+|+++++.+.+. +. ...++.+.
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l----------------------~~-----------~~~~~~~~ 233 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVM----------------------PP-----------IDYEMAAY 233 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC----------------------TT-----------SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc----------------------cc-----------CCHHHHHH
Confidence 4689999999999999999999999999999876431 00 01366777
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~ 147 (303)
+.+.+++.++.. ++++.|++++.+. + .|.+.++ .+ +.+|.||+|+|.
T Consensus 234 l~~~l~~~GV~i--~~~~~v~~i~~~~--~--~v~~~~g-------~~-i~~D~Vi~a~G~ 280 (588)
T 3ics_A 234 VHEHMKNHDVEL--VFEDGVDALEENG--A--VVRLKSG-------SV-IQTDMLILAIGV 280 (588)
T ss_dssp HHHHHHHTTCEE--ECSCCEEEEEGGG--T--EEEETTS-------CE-EECSEEEECSCE
T ss_pred HHHHHHHcCCEE--EECCeEEEEecCC--C--EEEECCC-------CE-EEcCEEEEccCC
Confidence 888888888766 8899999997543 2 3555543 56 899999999993
No 238
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.30 E-value=6.4e-07 Score=81.90 Aligned_cols=38 Identities=24% Similarity=0.426 Sum_probs=36.4
Q ss_pred CcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCc
Q 022090 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASI 45 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~ 45 (303)
+||+|||||++||++|..|++.|++|+|+|+++.+||.
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr 77 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGR 77 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTT
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCc
Confidence 79999999999999999999999999999999999884
No 239
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.29 E-value=6e-07 Score=79.00 Aligned_cols=41 Identities=22% Similarity=0.253 Sum_probs=38.0
Q ss_pred CcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCc
Q 022090 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK 48 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~ 48 (303)
+||+|||||++|+++|..|++.|.+|+|+|+++.+||....
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~ 42 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYT 42 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEe
Confidence 68999999999999999999999999999999999987543
No 240
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.29 E-value=2.5e-06 Score=77.03 Aligned_cols=98 Identities=17% Similarity=0.295 Sum_probs=70.0
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+... . ...++.+.
T Consensus 148 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-------------------------------~-~~~~~~~~ 195 (449)
T 3kd9_A 148 VENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRR-------------------------------S-FDKEVTDI 195 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT-------------------------------T-SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh-------------------------------h-cCHHHHHH
Confidence 468999999999999999999999999999998753100 0 01256666
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPF 152 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~ 152 (303)
+.+..++. ++ +++++.|.+++.++ ....+ ..++ .+ +.+|.||+|+| ..|+
T Consensus 196 l~~~l~~~-v~--i~~~~~v~~i~~~~--~v~~v-~~~g-------~~-i~~D~Vv~a~G--~~p~ 245 (449)
T 3kd9_A 196 LEEKLKKH-VN--LRLQEITMKIEGEE--RVEKV-VTDA-------GE-YKAELVILATG--IKPN 245 (449)
T ss_dssp HHHHHTTT-SE--EEESCCEEEEECSS--SCCEE-EETT-------EE-EECSEEEECSC--EEEC
T ss_pred HHHHHHhC-cE--EEeCCeEEEEeccC--cEEEE-EeCC-------CE-EECCEEEEeeC--CccC
Confidence 76666655 44 48899999886543 22223 3332 57 89999999999 4444
No 241
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.29 E-value=2.7e-06 Score=74.47 Aligned_cols=108 Identities=10% Similarity=0.113 Sum_probs=71.2
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
.++|+|||+|.+|+.+|..|.+.|.+|+++++.+.+... . + .+...-...+.++
T Consensus 166 ~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~-------~--------------~-----d~~~~~~~~~~~~ 219 (369)
T 3d1c_A 166 KGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDP-------D--------------A-----DPSVRLSPYTRQR 219 (369)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCEEEEECC------------------------------------CTTSCCHHHHHH
T ss_pred CCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCC-------C--------------C-----CCCccCCHHHHHH
Confidence 358999999999999999999999999999987642100 0 0 0011111345566
Q ss_pred HHHHHHHcC-CCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCC
Q 022090 87 LDHYVSHFN-IGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (303)
Q Consensus 87 l~~~~~~~~-l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~ 153 (303)
+.+..++.+ +.. ++++.|.+++.++ +.+.|.+.++. .. ..+|.||+|+| ..|+.
T Consensus 220 l~~~l~~~g~v~~--~~~~~v~~i~~~~--~~~~v~~~~g~------~~-~~~d~vi~a~G--~~~~~ 274 (369)
T 3d1c_A 220 LGNVIKQGARIEM--NVHYTVKDIDFNN--GQYHISFDSGQ------SV-HTPHEPILATG--FDATK 274 (369)
T ss_dssp HHHHHHTTCCEEE--ECSCCEEEEEEET--TEEEEEESSSC------CE-EESSCCEECCC--BCGGG
T ss_pred HHHHHhhCCcEEE--ecCcEEEEEEecC--CceEEEecCCe------Ee-ccCCceEEeec--cCCcc
Confidence 666666664 655 8889999997654 45677776641 23 34699999999 55544
No 242
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.29 E-value=7.3e-06 Score=70.63 Aligned_cols=96 Identities=17% Similarity=0.135 Sum_probs=68.5
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
..+|+|||+|..|+.+|..|.+.|.+|+++++.+.+.. ...
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~---------------------------------------~~~ 213 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA---------------------------------------STI 213 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS---------------------------------------CHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC---------------------------------------CHH
Confidence 46899999999999999999999999999998764210 022
Q ss_pred HHHHH-HHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCC
Q 022090 87 LDHYV-SHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (303)
Q Consensus 87 l~~~~-~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~ 147 (303)
+.+.+ +..++.. ++++.|.+++.++ .....|.+.+..++ +..+ +.+|.||+|+|.
T Consensus 214 ~~~~l~~~~gv~i--~~~~~v~~i~~~~-~~~~~v~~~~~~~g--~~~~-i~~D~vi~a~G~ 269 (338)
T 3itj_A 214 MQKRAEKNEKIEI--LYNTVALEAKGDG-KLLNALRIKNTKKN--EETD-LPVSGLFYAIGH 269 (338)
T ss_dssp HHHHHHHCTTEEE--ECSEEEEEEEESS-SSEEEEEEEETTTT--EEEE-EECSEEEECSCE
T ss_pred HHHHHHhcCCeEE--eecceeEEEEccc-CcEEEEEEEECCCC--ceEE-EEeCEEEEEeCC
Confidence 22333 3336554 8899999998765 23344666653222 3367 899999999993
No 243
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.26 E-value=8.6e-06 Score=69.49 Aligned_cols=99 Identities=18% Similarity=0.160 Sum_probs=68.3
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
..+|+|||+|++|+.+|..|++.+.+|+++++.+.+. . + ..
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-------~---------------------------~-----~~ 184 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK-------A---------------------------D-----QV 184 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC-------S---------------------------C-----HH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC-------c---------------------------c-----HH
Confidence 4689999999999999999999999999999876420 0 0 12
Q ss_pred HHHHHHH-cCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCC
Q 022090 87 LDHYVSH-FNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPF 152 (303)
Q Consensus 87 l~~~~~~-~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~ 152 (303)
+.+.+++ .+++. +++++++++..++ +....|.+.+..++ +..+ +.+|.||+|+| ..|+
T Consensus 185 ~~~~l~~~~gv~v--~~~~~v~~i~~~~-~~v~~v~~~~~~~g--~~~~-i~~D~vi~a~G--~~p~ 243 (310)
T 1fl2_A 185 LQDKLRSLKNVDI--ILNAQTTEVKGDG-SKVVGLEYRDRVSG--DIHN-IELAGIFVQIG--LLPN 243 (310)
T ss_dssp HHHHHHTCTTEEE--ESSEEEEEEEESS-SSEEEEEEEETTTC--CEEE-EECSEEEECSC--EEES
T ss_pred HHHHHhhCCCeEE--ecCCceEEEEcCC-CcEEEEEEEECCCC--cEEE-EEcCEEEEeeC--CccC
Confidence 2333333 45444 8899999998653 22224666553222 3357 89999999999 4444
No 244
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.25 E-value=8.6e-07 Score=80.62 Aligned_cols=40 Identities=23% Similarity=0.307 Sum_probs=37.0
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCC--CCeEEEecCCCCCCcc
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQS--IPYVILERENCYASIW 46 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g--~~v~iie~~~~~gg~w 46 (303)
++||+|||||++|+++|..|++.| .+|+|+|+++.+||..
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~ 45 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKV 45 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTC
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCcee
Confidence 479999999999999999999999 9999999999888843
No 245
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.24 E-value=1.2e-06 Score=78.73 Aligned_cols=42 Identities=17% Similarity=0.302 Sum_probs=38.6
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWK 47 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~ 47 (303)
..+||+|||+|++|+++|..|++.|.+|+++|+++.+||.+.
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~ 46 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESS 46 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSC
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCcccccc
Confidence 458999999999999999999999999999999999998643
No 246
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.23 E-value=1.1e-05 Score=69.09 Aligned_cols=99 Identities=20% Similarity=0.173 Sum_probs=68.4
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. ....+
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~-----------------------------------~~~~l--- 196 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYM-----------------------------------CENAY--- 196 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCC-----------------------------------SCHHH---
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccC-----------------------------------CCHHH---
Confidence 3689999999999999999999999999999875321 00122
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPF 152 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~ 152 (303)
.+.+.+.+++. +++++++++..++ .....|.+.+..++ +..+ +.+|.||+|+| ..|+
T Consensus 197 -~~~l~~~gv~i--~~~~~v~~i~~~~-~~v~~v~~~~~~~g--~~~~-i~~D~vi~a~G--~~p~ 253 (319)
T 3cty_A 197 -VQEIKKRNIPY--IMNAQVTEIVGDG-KKVTGVKYKDRTTG--EEKL-IETDGVFIYVG--LIPQ 253 (319)
T ss_dssp -HHHHHHTTCCE--ECSEEEEEEEESS-SSEEEEEEEETTTC--CEEE-ECCSEEEECCC--EEEC
T ss_pred -HHHHhcCCcEE--EcCCeEEEEecCC-ceEEEEEEEEcCCC--ceEE-EecCEEEEeeC--CccC
Confidence 33334567666 8999999998754 11234555431111 2247 89999999999 4444
No 247
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.23 E-value=5.4e-06 Score=71.34 Aligned_cols=99 Identities=16% Similarity=0.240 Sum_probs=67.1
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
..+|+|||+|..|+.+|..|.+.|.+|+++++.+.+. . . ..+.
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---------------------------~-------~-~~~~-- 194 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLR---------------------------A-------N-KVAQ-- 194 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC---------------------------S-------C-HHHH--
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCC---------------------------c-------c-hHHH--
Confidence 4689999999999999999999999999999876421 0 0 1221
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPF 152 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~ 152 (303)
.+..+..+++ ++++++++++..++ ....|.+.+..++ +..+ +.+|.||+|+| ..|+
T Consensus 195 -~~l~~~~gv~--i~~~~~v~~i~~~~--~v~~v~~~~~~~g--~~~~-i~~D~vi~a~G--~~p~ 250 (325)
T 2q7v_A 195 -ARAFANPKMK--FIWDTAVEEIQGAD--SVSGVKLRNLKTG--EVSE-LATDGVFIFIG--HVPN 250 (325)
T ss_dssp -HHHHTCTTEE--EECSEEEEEEEESS--SEEEEEEEETTTC--CEEE-EECSEEEECSC--EEES
T ss_pred -HHHHhcCCce--EecCCceEEEccCC--cEEEEEEEECCCC--cEEE-EEcCEEEEccC--CCCC
Confidence 2222223544 48899999998642 3335666531111 2247 89999999999 4444
No 248
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.23 E-value=6.7e-06 Score=71.83 Aligned_cols=102 Identities=15% Similarity=0.142 Sum_probs=71.6
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
..+|+|||+|..|+.+|..|.+.|.+|+++++.+.+.. ...+.+.
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~-----------------------------------~~~~~~~ 207 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQG-----------------------------------HGKTAHE 207 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSS-----------------------------------CSHHHHS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCC-----------------------------------CHHHHHH
Confidence 46899999999999999999999999999998764210 0134455
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPF 152 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~ 152 (303)
+.+..++.+++. +++++|++++.++ +....|.+...++ +... +.+|.||+|+| ..|+
T Consensus 208 l~~~~~~~gv~i--~~~~~v~~i~~~~-~~v~~v~~~~~~g---~~~~-i~~D~vi~a~G--~~p~ 264 (360)
T 3ab1_A 208 VERARANGTIDV--YLETEVASIEESN-GVLTRVHLRSSDG---SKWT-VEADRLLILIG--FKSN 264 (360)
T ss_dssp SHHHHHHTSEEE--ESSEEEEEEEEET-TEEEEEEEEETTC---CEEE-EECSEEEECCC--BCCS
T ss_pred HHHHhhcCceEE--EcCcCHHHhccCC-CceEEEEEEecCC---CeEE-EeCCEEEECCC--CCCC
Confidence 556666666555 8999999998764 1222455541111 2257 89999999999 4444
No 249
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.21 E-value=2.6e-05 Score=73.02 Aligned_cols=105 Identities=15% Similarity=0.105 Sum_probs=72.1
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
+.+|+|||||..|+.+|..|++.|.+|+++++...+ +.+ ..++.++
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l-----------------------~~~-----------d~~~~~~ 331 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGDVTVMVRSILL-----------------------RGF-----------DQQMAEK 331 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSS-----------------------TTS-----------CHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCcCc-----------------------CcC-----------CHHHHHH
Confidence 468999999999999999999999999999986211 000 1256677
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEe-----C--CCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYD-----E--ATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~-----~--~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~ 153 (303)
+.+..++.++.. ++++.++++... + ..+...+.....++ +... +.+|.||+|+| ..|+.
T Consensus 332 ~~~~l~~~gv~i--~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g---~~~~-~~~D~vi~a~G--~~p~~ 397 (598)
T 2x8g_A 332 VGDYMENHGVKF--AKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDG---KKFE-EEFETVIFAVG--REPQL 397 (598)
T ss_dssp HHHHHHHTTCEE--EETEEEEEEEEEECCBTTTTBCCEEEEEEEETTS---CEEE-EEESEEEECSC--EEECG
T ss_pred HHHHHHhCCCEE--EECCeEEEEEeccccccccCCCceEEEEEEeCCC---cEEe-ccCCEEEEEeC--Ccccc
Confidence 777777788766 889888887643 2 11344454322111 2234 56999999999 44543
No 250
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.21 E-value=6.5e-06 Score=74.70 Aligned_cols=104 Identities=18% Similarity=0.270 Sum_probs=71.4
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
+.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. . +. ..++.+.
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~----------------------~---------~~-d~~~~~~ 219 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALI----------------------T---------LE-DQDIVNT 219 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT----------------------T---------SC-CHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCC----------------------C---------CC-CHHHHHH
Confidence 46899999999999999999999999999998764310 0 00 1244455
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTP 154 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~p 154 (303)
+.+..+ + .+++++.|++++.++. +...+.+.+.+ + +..+ +.+|.||+|+| ..|+..
T Consensus 220 l~~~l~---v--~i~~~~~v~~i~~~~~-~~v~v~~~~~~-G--~~~~-i~~D~vi~a~G--~~p~~~ 275 (466)
T 3l8k_A 220 LLSILK---L--NIKFNSPVTEVKKIKD-DEYEVIYSTKD-G--SKKS-IFTNSVVLAAG--RRPVIP 275 (466)
T ss_dssp HHHHHC---C--CEECSCCEEEEEEEET-TEEEEEECCTT-S--CCEE-EEESCEEECCC--EEECCC
T ss_pred HHhcCE---E--EEEECCEEEEEEEcCC-CcEEEEEEecC-C--ceEE-EEcCEEEECcC--CCcccc
Confidence 544433 4 4488999999976531 34566665211 1 2257 89999999999 555543
No 251
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=98.19 E-value=1.5e-06 Score=78.95 Aligned_cols=43 Identities=40% Similarity=0.519 Sum_probs=38.4
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCC-CeEEEecCCCCCCccCc
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSI-PYVILERENCYASIWKK 48 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~-~v~iie~~~~~gg~w~~ 48 (303)
..+||+|||||++|+++|..|.+.|. +|+|+|+++.+||.+..
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~ 46 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHK 46 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceee
Confidence 35799999999999999999999999 89999999999997654
No 252
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.19 E-value=1.1e-05 Score=69.34 Aligned_cols=98 Identities=13% Similarity=0.075 Sum_probs=70.0
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
..+|+|||+|..|+.+|..|++.+.+|+++++.+.+.. ....
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~-----------------------------------~~~~--- 195 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRA-----------------------------------HEHS--- 195 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSS-----------------------------------CHHH---
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCc-----------------------------------cHHH---
Confidence 46899999999999999999999999999988764210 0011
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPF 152 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~ 152 (303)
...+++.++.. +.++.+.++..++ +...|.+.+...+ +..+ +.+|.||+|+| ..|+
T Consensus 196 -~~~l~~~gv~~--~~~~~v~~i~~~~--~~~~v~~~~~~~g--~~~~-~~~D~vv~a~G--~~p~ 251 (332)
T 3lzw_A 196 -VENLHASKVNV--LTPFVPAELIGED--KIEQLVLEEVKGD--RKEI-LEIDDLIVNYG--FVSS 251 (332)
T ss_dssp -HHHHHHSSCEE--ETTEEEEEEECSS--SCCEEEEEETTSC--CEEE-EECSEEEECCC--EECC
T ss_pred -HHHHhcCCeEE--EeCceeeEEecCC--ceEEEEEEecCCC--ceEE-EECCEEEEeec--cCCC
Confidence 12245567665 8899999997654 3455666653322 2367 89999999999 4443
No 253
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.19 E-value=6.1e-06 Score=70.46 Aligned_cols=101 Identities=17% Similarity=0.168 Sum_probs=67.5
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. .. ..+.+
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~----------------------------------~~-~~~~~- 186 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR----------------------------------CA-PITLE- 186 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC----------------------------------SC-HHHHH-
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC----------------------------------CC-HHHHH-
Confidence 4689999999999999999999999999999876421 00 12222
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~ 153 (303)
...+..+++ +++++.++++..++ ++...|.+.+..++ +..+ +.+|.||+|+| ..|+.
T Consensus 187 --~l~~~~gv~--v~~~~~v~~i~~~~-~~v~~v~~~~~~~g--~~~~-i~~D~vi~a~G--~~p~~ 243 (311)
T 2q0l_A 187 --HAKNNDKIE--FLTPYVVEEIKGDA-SGVSSLSIKNTATN--EKRE-LVVPGFFIFVG--YDVNN 243 (311)
T ss_dssp --HHHTCTTEE--EETTEEEEEEEEET-TEEEEEEEEETTTC--CEEE-EECSEEEECSC--EEECC
T ss_pred --HHhhCCCeE--EEeCCEEEEEECCC-CcEeEEEEEecCCC--ceEE-EecCEEEEEec--CccCh
Confidence 222234544 48899999998763 12224555531111 2247 89999999999 44443
No 254
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.17 E-value=8.4e-06 Score=70.30 Aligned_cols=102 Identities=20% Similarity=0.257 Sum_probs=68.4
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
..+|+|||+|..|+.+|..|.+.|.+|+++++.+.+. . ...+.
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~----------------------------------~-~~~~~-- 201 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFR----------------------------------A-SKIMQ-- 201 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCC----------------------------------S-CHHHH--
T ss_pred CCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCC----------------------------------c-cHHHH--
Confidence 4689999999999999999999999999999876421 0 01111
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCC-CeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEAT-NMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~-~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~ 153 (303)
.+..++.+++. +++++++++..+++. ....|.+.+..++ +..+ +.+|.||+|+| ..|+.
T Consensus 202 -~~~~~~~gv~i--~~~~~v~~i~~~~~~~~v~~v~~~~~~~g--~~~~-i~~D~vi~a~G--~~p~~ 261 (333)
T 1vdc_A 202 -QRALSNPKIDV--IWNSSVVEAYGDGERDVLGGLKVKNVVTG--DVSD-LKVSGLFFAIG--HEPAT 261 (333)
T ss_dssp -HHHHTCTTEEE--ECSEEEEEEEESSSSSSEEEEEEEETTTC--CEEE-EECSEEEECSC--EEESC
T ss_pred -HHHHhCCCeeE--ecCCceEEEeCCCCccceeeEEEEecCCC--ceEE-EecCEEEEEeC--Cccch
Confidence 12333455544 889999999865421 2223555532111 2257 89999999999 44443
No 255
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.17 E-value=9.2e-06 Score=69.47 Aligned_cols=99 Identities=21% Similarity=0.231 Sum_probs=69.6
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
..+|+|||+|..|+.+|..|.+.|.+|+++++.+.+.. .. ++
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~-----------------------------------~~---~~ 195 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA-----------------------------------QP---IY 195 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS-----------------------------------CH---HH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc-----------------------------------CH---HH
Confidence 46899999999999999999999999999998764210 01 22
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPF 152 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~ 152 (303)
+.+..+..++.. ++++.+++++.++ ....|.+.+..++ +..+ +.+|.||+|+| ..|.
T Consensus 196 ~~~~~~~~gv~~--~~~~~v~~i~~~~--~~~~v~~~~~~~g--~~~~-~~~D~vv~a~G--~~p~ 252 (323)
T 3f8d_A 196 VETVKKKPNVEF--VLNSVVKEIKGDK--VVKQVVVENLKTG--EIKE-LNVNGVFIEIG--FDPP 252 (323)
T ss_dssp HHHHHTCTTEEE--ECSEEEEEEEESS--SEEEEEEEETTTC--CEEE-EECSEEEECCC--EECC
T ss_pred HHHHHhCCCcEE--EeCCEEEEEeccC--ceeEEEEEECCCC--ceEE-EEcCEEEEEEC--CCCC
Confidence 233333346544 8899999998753 4455777652222 3347 89999999999 4444
No 256
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.15 E-value=2.1e-06 Score=75.23 Aligned_cols=36 Identities=28% Similarity=0.420 Sum_probs=33.2
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~ 41 (303)
..+||+|||||++|+++|..|+++|.+|+|+|+...
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~ 40 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARDLP 40 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCC
Confidence 357999999999999999999999999999999753
No 257
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.15 E-value=1.3e-06 Score=78.60 Aligned_cols=34 Identities=24% Similarity=0.368 Sum_probs=31.8
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
++||+|||||++|+++|..|++.|++|+|+|+.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 3799999999999999999999999999999876
No 258
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.14 E-value=1.6e-06 Score=76.73 Aligned_cols=87 Identities=14% Similarity=0.066 Sum_probs=65.8
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+... . -..++.++
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~-------------------------------~-~~~~~~~~ 193 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLER-------------------------------Q-LDRDGGLF 193 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTT-------------------------------T-SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh-------------------------------h-cCHHHHHH
Confidence 368999999999999999999999999999998753100 0 01366777
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPF 152 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~ 152 (303)
+.+..++.+++. ++++.++++ + .+ +.+|.||+|+| ..|+
T Consensus 194 ~~~~l~~~gV~~--~~~~~v~~i---------------g-------~~-~~~D~vv~a~G--~~p~ 232 (385)
T 3klj_A 194 LKDKLDRLGIKI--YTNSNFEEM---------------G-------DL-IRSSCVITAVG--VKPN 232 (385)
T ss_dssp HHHHHHTTTCEE--ECSCCGGGC---------------H-------HH-HHHSEEEECCC--EEEC
T ss_pred HHHHHHhCCCEE--EeCCEEEEc---------------C-------eE-EecCeEEECcC--cccC
Confidence 788888777665 777666544 1 45 89999999999 5444
No 259
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.13 E-value=6.9e-06 Score=71.03 Aligned_cols=100 Identities=14% Similarity=0.186 Sum_probs=67.1
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
..+|+|||+|..|+.+|..|++.|.+|+++++.+.+. . . ..+.
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~---------------------------~---~-----~~~~-- 197 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFR---------------------------A---S-----KIML-- 197 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCS---------------------------S---C-----TTHH--
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCC---------------------------c---c-----HHHH--
Confidence 4689999999999999999999999999999876421 0 0 0111
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~ 153 (303)
.+..++.+++. +++++|++++.++ +...|.+.+..++ +..+ +.+|.||+|+| ..|+.
T Consensus 198 -~~~~~~~gV~v--~~~~~v~~i~~~~--~~~~v~~~~~~~g--~~~~-i~~D~vi~a~G--~~p~~ 254 (335)
T 2a87_A 198 -DRARNNDKIRF--LTNHTVVAVDGDT--TVTGLRVRDTNTG--AETT-LPVTGVFVAIG--HEPRS 254 (335)
T ss_dssp -HHHHHCTTEEE--ECSEEEEEEECSS--SCCEEEEEEETTS--CCEE-ECCSCEEECSC--EEECC
T ss_pred -HHHhccCCcEE--EeCceeEEEecCC--cEeEEEEEEcCCC--ceEE-eecCEEEEccC--CccCh
Confidence 12234456544 8899999997654 2233444431111 2257 89999999999 55543
No 260
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.13 E-value=2e-06 Score=77.84 Aligned_cols=41 Identities=22% Similarity=0.311 Sum_probs=37.9
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCcc
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIW 46 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w 46 (303)
..+||+|||+|++|+++|..|++.|.+|+++|+++..||.+
T Consensus 19 ~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~ 59 (475)
T 3p1w_A 19 EHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGET 59 (475)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGG
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCc
Confidence 35799999999999999999999999999999999999843
No 261
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.11 E-value=6.8e-06 Score=75.26 Aligned_cols=99 Identities=14% Similarity=0.142 Sum_probs=70.6
Q ss_pred CcEEEECCcHHHHHHHHHHhhC--------------CCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCC
Q 022090 8 VEVIMVGAGTSGLATAACLSLQ--------------SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSS 73 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~--------------g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (303)
..++|||||+.|+.+|..|++. ..+|+++|..+.+- +.+
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il----------------------~~~----- 270 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVL----------------------NMF----- 270 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSS----------------------TTS-----
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccc----------------------cCC-----
Confidence 3699999999999999998754 36899999987531 111
Q ss_pred CCCCCCHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCC
Q 022090 74 YPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (303)
Q Consensus 74 ~~~~~~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~ 147 (303)
.+++.+++.+..++.|+++ ++++.|++++.+. ..+.....+ +....++ +.+|.||.|+|.
T Consensus 271 ------~~~~~~~~~~~L~~~GV~v--~~~~~v~~v~~~~----~~~~~~~~d-g~~~~~~-i~ad~viwa~Gv 330 (502)
T 4g6h_A 271 ------EKKLSSYAQSHLENTSIKV--HLRTAVAKVEEKQ----LLAKTKHED-GKITEET-IPYGTLIWATGN 330 (502)
T ss_dssp ------CHHHHHHHHHHHHHTTCEE--ETTEEEEEECSSE----EEEEEECTT-SCEEEEE-EECSEEEECCCE
T ss_pred ------CHHHHHHHHHHHHhcceee--ecCceEEEEeCCc----eEEEEEecC-cccceee-eccCEEEEccCC
Confidence 1378888899999999776 9999999985432 333332211 1112257 899999999994
No 262
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.09 E-value=1.1e-05 Score=68.78 Aligned_cols=99 Identities=17% Similarity=0.150 Sum_probs=68.5
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
..+|+|||+|+.|+.+|..|.+.+.+|+++++.+.+. .. .+.
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~-----------------------------------~~---~~~ 188 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFR-----------------------------------AA---PST 188 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCB-----------------------------------SC---HHH
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCC-----------------------------------CC---HHH
Confidence 4689999999999999999999999999999876421 00 122
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPF 152 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~ 152 (303)
+.+..++.+++. ++++.+.++..++ +....|.+... ++ +..+ +.+|.||+|+| ..|+
T Consensus 189 ~~~~~~~~gv~~--~~~~~v~~i~~~~-~~~~~v~~~~~-~g--~~~~-~~~D~vv~a~G--~~p~ 245 (315)
T 3r9u_A 189 VEKVKKNEKIEL--ITSASVDEVYGDK-MGVAGVKVKLK-DG--SIRD-LNVPGIFTFVG--LNVR 245 (315)
T ss_dssp HHHHHHCTTEEE--ECSCEEEEEEEET-TEEEEEEEECT-TS--CEEE-ECCSCEEECSC--EEEC
T ss_pred HHHHHhcCCeEE--EeCcEEEEEEcCC-CcEEEEEEEcC-CC--CeEE-eecCeEEEEEc--CCCC
Confidence 333344556554 8899999998764 12233555411 11 3357 89999999999 4444
No 263
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.04 E-value=3.4e-06 Score=79.22 Aligned_cols=40 Identities=18% Similarity=0.222 Sum_probs=37.1
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCcc
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIW 46 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w 46 (303)
.+||+|||||++|+++|..|++.|++|+|+|+.+..||.+
T Consensus 46 ~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 46 KYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLK 85 (623)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSS
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcc
Confidence 5799999999999999999999999999999999888754
No 264
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=98.03 E-value=4.8e-06 Score=78.91 Aligned_cols=41 Identities=29% Similarity=0.363 Sum_probs=37.9
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCcc
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIW 46 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w 46 (303)
..++|+|||||++|+++|..|.+.|++|+|+|+.+.+||.+
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~ 146 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRV 146 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTC
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCcc
Confidence 35799999999999999999999999999999999888854
No 265
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.03 E-value=2.6e-05 Score=66.53 Aligned_cols=34 Identities=24% Similarity=0.407 Sum_probs=31.6
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
.++|+|||+|..|+.+|..|++.|.+|+++++..
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~ 185 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRD 185 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCeEEEECCChHHHHHHHHHHHhCCeeeeecccc
Confidence 4689999999999999999999999999999765
No 266
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=98.00 E-value=5.9e-06 Score=79.98 Aligned_cols=41 Identities=29% Similarity=0.363 Sum_probs=37.9
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCcc
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIW 46 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w 46 (303)
..++|+|||||++||++|..|.+.|++|+|+|+.+.+||.+
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~~ 317 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRV 317 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCce
Confidence 35799999999999999999999999999999999998854
No 267
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.99 E-value=3.6e-05 Score=70.81 Aligned_cols=99 Identities=20% Similarity=0.195 Sum_probs=68.1
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
.++|+|||+|.+|+.+|..|++.|.+|+++++.+.+. + + .+
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~---------------------------~-------~-----~~ 395 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK---------------------------A-------D-----QV 395 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCC---------------------------S-------C-----HH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccC---------------------------c-------C-----HH
Confidence 4689999999999999999999999999999876421 0 0 12
Q ss_pred HHHHHHH-cCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCC
Q 022090 87 LDHYVSH-FNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPF 152 (303)
Q Consensus 87 l~~~~~~-~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~ 152 (303)
+.+.+++ .++. +++++.++++..++ +....|.+.+..++ +..+ +.+|.||+|+| ..|+
T Consensus 396 l~~~l~~~~gV~--v~~~~~v~~i~~~~-~~v~~v~~~~~~~g--~~~~-i~~D~vi~a~G--~~pn 454 (521)
T 1hyu_A 396 LQDKVRSLKNVD--IILNAQTTEVKGDG-SKVVGLEYRDRVSG--DIHS-VALAGIFVQIG--LLPN 454 (521)
T ss_dssp HHHHHTTCTTEE--EECSEEEEEEEECS-SSEEEEEEEETTTC--CEEE-EECSEEEECCC--EEES
T ss_pred HHHHHhcCCCcE--EEeCCEEEEEEcCC-CcEEEEEEEeCCCC--ceEE-EEcCEEEECcC--CCCC
Confidence 3333333 3544 48899999997653 22224566543222 3357 89999999999 4444
No 268
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.99 E-value=1.4e-05 Score=76.03 Aligned_cols=97 Identities=11% Similarity=0.047 Sum_probs=68.6
Q ss_pred CCcEEEEC--CcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHH
Q 022090 7 GVEVIMVG--AGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (303)
Q Consensus 7 ~~~vvIIG--aG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 84 (303)
..+|+||| +|..|+.+|..|.+.|.+|+++++.+.+..... ...+.
T Consensus 523 g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~--------------------------------~~~~~ 570 (690)
T 3k30_A 523 GKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTN--------------------------------NTFEV 570 (690)
T ss_dssp SSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGGG--------------------------------GGTCH
T ss_pred CCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccccc--------------------------------cchhH
Confidence 35799999 999999999999999999999998775321100 00123
Q ss_pred HHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccC
Q 022090 85 EHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASG 146 (303)
Q Consensus 85 ~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG 146 (303)
..+.+.+++.+++. +++++|++++.+. ..+...... +..+ +.+|.||+|+|
T Consensus 571 ~~l~~~l~~~GV~i--~~~~~V~~i~~~~----~~v~~~~~~----~~~~-i~aD~VV~A~G 621 (690)
T 3k30_A 571 NRIQRRLIENGVAR--VTDHAVVAVGAGG----VTVRDTYAS----IERE-LECDAVVMVTA 621 (690)
T ss_dssp HHHHHHHHHTTCEE--EESEEEEEEETTE----EEEEETTTC----CEEE-EECSEEEEESC
T ss_pred HHHHHHHHHCCCEE--EcCcEEEEEECCe----EEEEEccCC----eEEE-EECCEEEECCC
Confidence 55666667778766 9999999986432 334332111 1257 89999999999
No 269
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.96 E-value=3.8e-06 Score=73.21 Aligned_cols=34 Identities=26% Similarity=0.516 Sum_probs=31.5
Q ss_pred CcEEEECCcHHHHHHHHHHhhCC------CCeEEEecCCC
Q 022090 8 VEVIMVGAGTSGLATAACLSLQS------IPYVILERENC 41 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~g------~~v~iie~~~~ 41 (303)
+||+|||||++|+++|..|+++| .+|+|+|+...
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~ 40 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFT 40 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCG
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCC
Confidence 48999999999999999999998 89999999863
No 270
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.95 E-value=7.5e-06 Score=69.19 Aligned_cols=88 Identities=6% Similarity=-0.065 Sum_probs=63.9
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
.++|+|||+|+.|+.+|..|.+.| +|+++++.+. .+.+.
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~----------------------------------------~~~~~ 179 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV----------------------------------------EPDAD 179 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC----------------------------------------CCCHH
T ss_pred CCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC----------------------------------------CCCHH
Confidence 468999999999999999999999 9999987642 00123
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~~ 153 (303)
+.+.+++.++.. + +++|++++.+ + .|.+.++ .+ +.+|.||+|+| ..|+.
T Consensus 180 ~~~~l~~~gv~i--~-~~~v~~i~~~---~--~v~~~~g-------~~-~~~D~vi~a~G--~~p~~ 228 (297)
T 3fbs_A 180 QHALLAARGVRV--E-TTRIREIAGH---A--DVVLADG-------RS-IALAGLFTQPK--LRITV 228 (297)
T ss_dssp HHHHHHHTTCEE--E-CSCEEEEETT---E--EEEETTS-------CE-EEESEEEECCE--EECCC
T ss_pred HHHHHHHCCcEE--E-cceeeeeecC---C--eEEeCCC-------CE-EEEEEEEEccC--cccCc
Confidence 445566677765 5 3778877532 1 5666654 56 89999999999 44443
No 271
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.90 E-value=1.4e-05 Score=69.99 Aligned_cols=36 Identities=28% Similarity=0.278 Sum_probs=33.1
Q ss_pred CcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCC
Q 022090 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCYA 43 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~g 43 (303)
+||+|||||++|+.+|..|++.|.+|+|+|+++..+
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~ 37 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRM 37 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSC
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcC
Confidence 699999999999999999999999999999987433
No 272
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.78 E-value=2.7e-05 Score=72.69 Aligned_cols=45 Identities=20% Similarity=0.360 Sum_probs=41.6
Q ss_pred CCCCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCc
Q 022090 4 QAAGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK 48 (303)
Q Consensus 4 ~~~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~ 48 (303)
.+..+||+|+|+|..|..+|..|++.|.+|+++|++++.||.|..
T Consensus 5 ~~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~~ 49 (650)
T 1vg0_A 5 LPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWAS 49 (650)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred CCCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCcccc
Confidence 345699999999999999999999999999999999999998864
No 273
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.78 E-value=0.00015 Score=71.65 Aligned_cols=97 Identities=12% Similarity=0.126 Sum_probs=69.0
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHHHH
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 86 (303)
..+|+|||+|+.|+.+|..|++.|.+|+|+++.+.+. . .
T Consensus 284 gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~------------------------------------~-~---- 322 (965)
T 2gag_A 284 GARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS------------------------------------A-A---- 322 (965)
T ss_dssp CSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC------------------------------------H-H----
T ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc------------------------------------h-h----
Confidence 3689999999999999999999999999999876421 0 1
Q ss_pred HHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEee--cC--CCCceeEEEEeeCEEEEccCCCCCCC
Q 022090 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASN--LL--SPGREIEEYYSGRFLVVASGETTNPF 152 (303)
Q Consensus 87 l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~--~~--~~~~~~~~~~~ad~vIlAtG~~~~p~ 152 (303)
.+.+++.++.+ ++++.|+++..++.+....|.+.+ .. ++ +..+ +.+|.||+|+| ..|+
T Consensus 323 -~~~l~~~GV~v--~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G--~~~~-i~~D~Vv~a~G--~~P~ 384 (965)
T 2gag_A 323 -AAQAVADGVQV--ISGSVVVDTEADENGELSAIVVAELDEARELG--GTQR-FEADVLAVAGG--FNPV 384 (965)
T ss_dssp -HHHHHHTTCCE--EETEEEEEEEECTTSCEEEEEEEEECTTCCEE--EEEE-EECSEEEEECC--EEEC
T ss_pred -HHHHHhCCeEE--EeCCEeEEEeccCCCCEEEEEEEeccccCCCC--ceEE-EEcCEEEECCC--cCcC
Confidence 23456678776 999999999874112333455543 10 00 2357 89999999999 5554
No 274
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.77 E-value=7.6e-05 Score=67.60 Aligned_cols=35 Identities=14% Similarity=0.051 Sum_probs=32.4
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~ 41 (303)
.++|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~ 231 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTA 231 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCC
Confidence 57899999999999999999999999999998764
No 275
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.73 E-value=0.00015 Score=61.83 Aligned_cols=35 Identities=17% Similarity=0.305 Sum_probs=32.4
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~ 41 (303)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.
T Consensus 145 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 179 (312)
T 4gcm_A 145 NKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDE 179 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEecccc
Confidence 46899999999999999999999999999998764
No 276
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.62 E-value=0.00017 Score=65.12 Aligned_cols=36 Identities=22% Similarity=0.316 Sum_probs=31.8
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCC-eEEEecCCC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIP-YVILERENC 41 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~-v~iie~~~~ 41 (303)
..++|+|||||..|+-+|..+.+.|.+ |+++++.+.
T Consensus 263 ~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~ 299 (456)
T 2vdc_G 263 AGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDR 299 (456)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCS
T ss_pred CCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCc
Confidence 356899999999999999999999985 999988764
No 277
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.62 E-value=0.00013 Score=65.60 Aligned_cols=35 Identities=17% Similarity=0.078 Sum_probs=32.1
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCC-eEEEecCCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIP-YVILERENC 41 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~-v~iie~~~~ 41 (303)
.++|+|||+|.+|+-+|..|++.+.+ |+++++.+.
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~ 247 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGG 247 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCC
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCC
Confidence 46899999999999999999999998 999998764
No 278
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.61 E-value=0.00029 Score=65.04 Aligned_cols=35 Identities=20% Similarity=0.328 Sum_probs=32.9
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~ 41 (303)
.++|+|||+|.+|+.+|..|++.+.+|+++++.+.
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred cceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 57899999999999999999999999999999875
No 279
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.60 E-value=1.8e-05 Score=74.84 Aligned_cols=36 Identities=25% Similarity=0.418 Sum_probs=33.8
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCC--------CCeEEEecCC-CC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQS--------IPYVILEREN-CY 42 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g--------~~v~iie~~~-~~ 42 (303)
.++|+|||||++||++|..|.+.| ++|+|+|+++ .+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 468999999999999999999998 9999999998 88
No 280
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.58 E-value=0.00021 Score=67.85 Aligned_cols=29 Identities=31% Similarity=0.396 Sum_probs=25.9
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEE
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVI 35 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~i 35 (303)
..+|+|||||..|+.+|..|++.|.+|++
T Consensus 494 ~~~VvVIGgG~~g~E~A~~l~~~G~~vtv 522 (671)
T 1ps9_A 494 GNKVAIIGCGGIGFDTAMYLSQPGESTSQ 522 (671)
T ss_dssp CSEEEEECCHHHHHHHHHHHTCCSSCGGG
T ss_pred CCeEEEECCChhHHHHHHHHHhcCCCccc
Confidence 46899999999999999999999877654
No 281
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=97.56 E-value=7.7e-05 Score=64.57 Aligned_cols=33 Identities=24% Similarity=0.401 Sum_probs=29.8
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
..+|+|||+|.+|+.+|..|++.+ +|+++.+..
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 468999999999999999999998 699998763
No 282
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.54 E-value=5.2e-05 Score=69.74 Aligned_cols=36 Identities=25% Similarity=0.407 Sum_probs=32.0
Q ss_pred CCCcEEEECCcHHHHHHHHHHhh-CCCCeEEEecCCC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSL-QSIPYVILERENC 41 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~-~g~~v~iie~~~~ 41 (303)
+.||++|||+|.+|+.+|.+|++ .+++|+|+|+...
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 36899999999999999999998 5789999998753
No 283
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.53 E-value=6.9e-05 Score=69.36 Aligned_cols=36 Identities=33% Similarity=0.444 Sum_probs=33.3
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~ 41 (303)
..+|++|||+|++|+.+|.+|++.|.+|+++|+...
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGP 41 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 468999999999999999999999999999999753
No 284
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.52 E-value=0.00061 Score=61.57 Aligned_cols=35 Identities=20% Similarity=0.260 Sum_probs=30.8
Q ss_pred CCcEEEECCcHHHHHHHHHHh--------------------hCCC-CeEEEecCCC
Q 022090 7 GVEVIMVGAGTSGLATAACLS--------------------LQSI-PYVILERENC 41 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~--------------------~~g~-~v~iie~~~~ 41 (303)
..+|+|||+|..|+.+|..|+ +.|. +|+|+++...
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP 200 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCCh
Confidence 468999999999999999999 5687 6999998764
No 285
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.47 E-value=0.00033 Score=62.86 Aligned_cols=103 Identities=11% Similarity=0.000 Sum_probs=63.7
Q ss_pred CcEEEECCcHHH------HHHH----HHHhhCCCC-----eEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCC
Q 022090 8 VEVIMVGAGTSG------LATA----ACLSLQSIP-----YVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPS 72 (303)
Q Consensus 8 ~~vvIIGaG~aG------l~~A----~~l~~~g~~-----v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (303)
.+++|||+|+.| +..| ..|.+.|.+ |+++++.+.++...
T Consensus 150 ~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~~~~~~~-------------------------- 203 (437)
T 3sx6_A 150 PGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGHLG-------------------------- 203 (437)
T ss_dssp CCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSSSTTCTT--------------------------
T ss_pred CCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCccccccc--------------------------
Confidence 467999997654 4444 667777764 99999887543110
Q ss_pred CCCCCCCHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCC
Q 022090 73 SYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (303)
Q Consensus 73 ~~~~~~~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~ 147 (303)
.+.++ ++...+.+..++.+++. ++++.|++++.+ ...+.....++...+..+ +.+|.+++|+|.
T Consensus 204 -l~~~~---~~~~~~~~~l~~~gI~~--~~~~~v~~v~~~----~v~~~~~~~~g~~~~~~~-i~~D~vv~~~g~ 267 (437)
T 3sx6_A 204 -IQGVG---DSKGILTKGLKEEGIEA--YTNCKVTKVEDN----KMYVTQVDEKGETIKEMV-LPVKFGMMIPAF 267 (437)
T ss_dssp -TTCCT---THHHHHHHHHHHTTCEE--ECSEEEEEEETT----EEEEEEECTTSCEEEEEE-EECSEEEEECCE
T ss_pred -cCcch---HHHHHHHHHHHHCCCEE--EcCCEEEEEECC----eEEEEecccCCccccceE-EEEeEEEEcCCC
Confidence 01111 24566777778888776 899999988632 233333211110001267 899999999984
No 286
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.40 E-value=0.00063 Score=61.39 Aligned_cols=36 Identities=28% Similarity=0.440 Sum_probs=30.6
Q ss_pred CCcEEEECCcHHHHHHHHHHhhC--------------------CC-CeEEEecCCCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQ--------------------SI-PYVILERENCY 42 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~--------------------g~-~v~iie~~~~~ 42 (303)
..+|+|||+|..|+.+|..|++. |. +|+++++...+
T Consensus 147 ~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~ 203 (456)
T 1lqt_A 147 GARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPL 203 (456)
T ss_dssp SSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChh
Confidence 46899999999999999999874 54 89999987643
No 287
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.37 E-value=0.00013 Score=67.72 Aligned_cols=36 Identities=25% Similarity=0.411 Sum_probs=33.0
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCC-CCeEEEecCCC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQS-IPYVILERENC 41 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g-~~v~iie~~~~ 41 (303)
..+|++|||||.||+.+|.+|++.+ .+|+|+|+...
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 4589999999999999999999997 79999999865
No 288
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.36 E-value=0.00044 Score=61.90 Aligned_cols=98 Identities=14% Similarity=0.088 Sum_probs=62.7
Q ss_pred CcEEEECCcHHH------HHHH----HHHhhCC----CCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCC
Q 022090 8 VEVIMVGAGTSG------LATA----ACLSLQS----IPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSS 73 (303)
Q Consensus 8 ~~vvIIGaG~aG------l~~A----~~l~~~g----~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (303)
.+++|||+|++| +..| ..|.+.| .+|+++++.+.++..- +
T Consensus 143 ~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~~~~~V~~v~~~~~~~~~~------------------l-------- 196 (430)
T 3h28_A 143 PGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFG------------------V-------- 196 (430)
T ss_dssp CCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTT------------------T--------
T ss_pred CCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCccceEEEEecCCccccccc------------------c--------
Confidence 467899998754 5444 5566667 4899999877543100 0
Q ss_pred CCCCCCHHHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCC
Q 022090 74 YPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (303)
Q Consensus 74 ~~~~~~~~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~ 147 (303)
+.+. .+.+.+.+.+++.+++. ++++.|++++.+ . +.+.+..+ +..+ +.+|.||+|+|.
T Consensus 197 -~~~~---~~~~~l~~~l~~~GV~i--~~~~~v~~v~~~----~--v~~~~~~~---~g~~-i~~D~vv~a~G~ 254 (430)
T 3h28_A 197 -GGIG---ASKRLVEDLFAERNIDW--IANVAVKAIEPD----K--VIYEDLNG---NTHE-VPAKFTMFMPSF 254 (430)
T ss_dssp -TCST---THHHHHHHHHHHTTCEE--ECSCEEEEECSS----E--EEEECTTS---CEEE-EECSEEEEECEE
T ss_pred -Ccch---HHHHHHHHHHHHCCCEE--EeCCEEEEEeCC----e--EEEEecCC---CceE-EeeeEEEECCCC
Confidence 0111 34566777778888776 899999998532 2 33333111 1267 899999999994
No 289
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.36 E-value=0.00034 Score=66.94 Aligned_cols=104 Identities=10% Similarity=0.030 Sum_probs=67.1
Q ss_pred CCcEEEEC--CcHHHHHHHHHHhhCCCCeEEEecCCCCCCccCcCCCCceEEecCcccccCCCCCCCCCCCCCCCHHHHH
Q 022090 7 GVEVIMVG--AGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (303)
Q Consensus 7 ~~~vvIIG--aG~aGl~~A~~l~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 84 (303)
.++|+||| +|..|+.+|..|++.|.+|+++++.+ +..... +.. . .
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~~~-----------------------------~~~--~-~ 574 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LANYMH-----------------------------FTL--E-Y 574 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHHHH-----------------------------HTT--C-H
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-cccccc-----------------------------ccc--c-H
Confidence 46899999 99999999999999999999999876 421000 000 0 2
Q ss_pred HHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEe--ecCC------------CCceeEEEEeeCEEEEccCCCCC
Q 022090 85 EHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKAS--NLLS------------PGREIEEYYSGRFLVVASGETTN 150 (303)
Q Consensus 85 ~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~--~~~~------------~~~~~~~~~~ad~vIlAtG~~~~ 150 (303)
..+.+.+++.|+.. ++++.+++++.+ ...+... ++.. ..+++.+ +.+|.||+|+| ..
T Consensus 575 ~~~~~~l~~~GV~i--~~~~~v~~i~~~----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~aD~Vv~a~G--~~ 645 (729)
T 1o94_A 575 PNMMRRLHELHVEE--LGDHFCSRIEPG----RMEIYNIWGDGSKRTYRGPGVSPRDANTSHRW-IEFDSLVLVTG--RH 645 (729)
T ss_dssp HHHHHHHHHTTCEE--ECSEEEEEEETT----EEEEEETTCSCSCCCCCCTTSCSSCCCCCCEE-EECSEEEEESC--EE
T ss_pred HHHHHHHHhCCCEE--EcCcEEEEEECC----eEEEEEecCCceEEecccccccccccCCccee-eeCCEEEECCC--CC
Confidence 34455556678766 899999988632 2333321 1100 0002246 79999999999 44
Q ss_pred CC
Q 022090 151 PF 152 (303)
Q Consensus 151 p~ 152 (303)
|+
T Consensus 646 p~ 647 (729)
T 1o94_A 646 SE 647 (729)
T ss_dssp EC
T ss_pred CC
Confidence 43
No 290
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.35 E-value=9e-05 Score=68.39 Aligned_cols=35 Identities=37% Similarity=0.482 Sum_probs=32.5
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCY 42 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~ 42 (303)
.+|++|||+|.+|+.+|.+|++ |.+|+|+|+....
T Consensus 26 ~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 26 SYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCG
T ss_pred cccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCc
Confidence 4899999999999999999999 9999999998654
No 291
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.29 E-value=0.00027 Score=53.80 Aligned_cols=41 Identities=17% Similarity=0.307 Sum_probs=33.5
Q ss_pred CCCCCCCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCC
Q 022090 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (303)
Q Consensus 1 M~~~~~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~ 41 (303)
|+......+|+|||+|..|..+|..|.+.|.+|+++|+++.
T Consensus 13 ~~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 13 MSKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp ----CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred hhcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 44445567899999999999999999999999999998753
No 292
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.27 E-value=0.0021 Score=63.88 Aligned_cols=34 Identities=21% Similarity=0.249 Sum_probs=31.0
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCC-CeEEEecCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSI-PYVILEREN 40 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~-~v~iie~~~ 40 (303)
..+|+|||||..|+.+|..|.+.|. +|+++++.+
T Consensus 332 ~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 332 RGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 3589999999999999999999997 899999875
No 293
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.26 E-value=0.00024 Score=65.06 Aligned_cols=38 Identities=18% Similarity=0.306 Sum_probs=34.2
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCCC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYA 43 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~g 43 (303)
..+|++|||+|++|+.+|..|.+.|.+|+++|+....+
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 35799999999999999999999999999999987543
No 294
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.19 E-value=0.00025 Score=65.87 Aligned_cols=35 Identities=34% Similarity=0.562 Sum_probs=32.0
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhC-CCCeEEEecCC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQ-SIPYVILEREN 40 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~-g~~v~iie~~~ 40 (303)
..+|++|||||.||+.+|.+|++. +.+|+|+|+..
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 358999999999999999999975 88999999976
No 295
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.14 E-value=0.00035 Score=63.99 Aligned_cols=36 Identities=28% Similarity=0.434 Sum_probs=33.1
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~ 41 (303)
..+|++|||+|++|+.+|.+|.+.|.+|+++|+...
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRS 45 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 358999999999999999999999999999998753
No 296
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.12 E-value=0.00034 Score=54.49 Aligned_cols=32 Identities=38% Similarity=0.483 Sum_probs=30.9
Q ss_pred eEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 188 NVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 188 ~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
+++|||+|.+|+++|..|++.|.+|+++++++
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 69999999999999999999999999999987
No 297
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.04 E-value=0.00053 Score=63.96 Aligned_cols=36 Identities=28% Similarity=0.438 Sum_probs=32.7
Q ss_pred CCCcEEEECCcHHHHHHHHHHhh-CCCCeEEEecCCC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSL-QSIPYVILERENC 41 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~-~g~~v~iie~~~~ 41 (303)
..+|++|||+|++|+.+|.+|++ .|.+|+++|+...
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~ 59 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFY 59 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCc
Confidence 34799999999999999999999 7999999998754
No 298
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.03 E-value=0.00025 Score=65.73 Aligned_cols=36 Identities=28% Similarity=0.418 Sum_probs=32.5
Q ss_pred CCcEEEECCcHHHHHHHHHHhh-CCCCeEEEecCCCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSL-QSIPYVILERENCY 42 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~-~g~~v~iie~~~~~ 42 (303)
.+|++|||||.+|+.+|.+|++ .+.+|+|+|+....
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 3799999999999999999998 68999999987643
No 299
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.94 E-value=0.00059 Score=63.08 Aligned_cols=36 Identities=31% Similarity=0.412 Sum_probs=32.9
Q ss_pred CCcEEEECCcHHHHHHHHHHhhC-CCCeEEEecCCCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQ-SIPYVILERENCY 42 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~-g~~v~iie~~~~~ 42 (303)
.+|++|||+|++|+.+|.+|++. |.+|+++|+....
T Consensus 13 ~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 13 EFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 47999999999999999999998 8999999997543
No 300
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=96.90 E-value=0.0025 Score=56.51 Aligned_cols=51 Identities=2% Similarity=-0.054 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCC
Q 022090 81 AQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (303)
Q Consensus 81 ~~l~~~l~~~~~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~ 147 (303)
..+.+.+.+.+++.+++. +++++|++++.+ . |.+.++ ++ +++|.||+|+|.
T Consensus 218 ~~~~~~~~~~l~~~gV~~--~~~~~v~~i~~~----~--v~~~~g-------~~-~~~D~vi~a~G~ 268 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIKL--VHNFKIKEIREH----E--IVDEKG-------NT-IPADITILLPPY 268 (409)
T ss_dssp HHHHHHHHHHHHHHTCEE--ECSCCEEEECSS----E--EEETTS-------CE-EECSEEEEECCE
T ss_pred HHHHHHHHHHHHHCCCEE--EcCCceEEECCC----e--EEECCC-------CE-EeeeEEEECCCC
Confidence 367777888888888776 889999888532 1 566554 57 899999999994
No 301
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=96.83 E-value=0.00067 Score=55.77 Aligned_cols=32 Identities=22% Similarity=0.410 Sum_probs=30.6
Q ss_pred eEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 188 NVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 188 ~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
.|+|||+|++|+-+|..|++.|.+|+++++++
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~ 35 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 59999999999999999999999999999876
No 302
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.78 E-value=0.0024 Score=47.49 Aligned_cols=34 Identities=26% Similarity=0.403 Sum_probs=31.9
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
+.+|+|||+|..|..+|..|.+.|++|+++|+++
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 4589999999999999999999999999999975
No 303
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.74 E-value=0.0021 Score=47.80 Aligned_cols=34 Identities=15% Similarity=0.312 Sum_probs=31.7
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
+.+|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4689999999999999999999999999999865
No 304
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.72 E-value=0.013 Score=53.38 Aligned_cols=36 Identities=14% Similarity=0.230 Sum_probs=30.9
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhC--CCCeEEEecCCC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQ--SIPYVILERENC 41 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~--g~~v~iie~~~~ 41 (303)
..++|+|||+|.+|.-++..|++. +.+|+++-|.+.
T Consensus 245 ~gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~ 282 (501)
T 4b63_A 245 KPYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSA 282 (501)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSS
T ss_pred CCcEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCc
Confidence 356899999999999999999875 678999988753
No 305
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.56 E-value=0.0038 Score=47.14 Aligned_cols=34 Identities=12% Similarity=0.107 Sum_probs=31.4
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
..+|+|+|+|..|...|..|.+.|++|+++|+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 3589999999999999999999999999999864
No 306
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.52 E-value=0.0028 Score=46.79 Aligned_cols=34 Identities=26% Similarity=0.480 Sum_probs=30.8
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
..+|+|||+|..|..+|..|.+.|++|+++|++.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3589999999999999999999999999999864
No 307
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=96.43 E-value=0.002 Score=52.46 Aligned_cols=32 Identities=41% Similarity=0.573 Sum_probs=30.5
Q ss_pred CeEEEECCCccHHHHHHHHhhccCceEEEeec
Q 022090 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRS 218 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~ 218 (303)
.+|+|||+|.+|+++|..|++.|.+|+++++.
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~ 35 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVRVGLLTQS 35 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEecC
Confidence 47999999999999999999999999999997
No 308
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=96.43 E-value=0.0014 Score=59.73 Aligned_cols=33 Identities=24% Similarity=0.409 Sum_probs=30.7
Q ss_pred CeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
|+|+|||+|.+|+-+|..|++.|.+|+++++++
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~ 34 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRD 34 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCC
Confidence 689999999999999999999999999999865
No 309
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.38 E-value=0.0032 Score=44.87 Aligned_cols=34 Identities=26% Similarity=0.334 Sum_probs=31.1
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCC-CCeEEEecCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQS-IPYVILEREN 40 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g-~~v~iie~~~ 40 (303)
..+|+|+|+|..|..++..|.+.| ++|++++++.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 458999999999999999999999 8999999864
No 310
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=96.35 E-value=0.0038 Score=53.23 Aligned_cols=39 Identities=23% Similarity=0.314 Sum_probs=31.3
Q ss_pred CCCCCCCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 1 M~~~~~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
|+. +...+|+|||+|..|...|..++..|++|+++|.++
T Consensus 1 Ma~-p~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 1 MAS-PAAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -------CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCC-CCCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 543 335689999999999999999999999999999865
No 311
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=96.31 E-value=0.019 Score=48.44 Aligned_cols=34 Identities=18% Similarity=0.146 Sum_probs=26.8
Q ss_pred CCcEEEECCcH-HHHHHHHHHhhCCCCeEEEecCC
Q 022090 7 GVEVIMVGAGT-SGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 7 ~~~vvIIGaG~-aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
.++++|||||. +++.+|..+.+.+.+|+++++.+
T Consensus 146 ~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~ 180 (304)
T 4fk1_A 146 DQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGN 180 (304)
T ss_dssp TSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSC
T ss_pred CCceeeecCCCchhhhHHHHHHhCCceEEEEeccc
Confidence 35677777775 57888888888899999997754
No 312
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=96.25 E-value=0.0058 Score=45.20 Aligned_cols=34 Identities=12% Similarity=0.148 Sum_probs=31.2
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
..+|+|+|+|..|..+|..|.+.|.+|+++|++.
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4579999999999999999999999999999864
No 313
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=96.12 E-value=0.0032 Score=55.40 Aligned_cols=32 Identities=28% Similarity=0.471 Sum_probs=30.7
Q ss_pred eEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 188 NVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 188 ~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
+|+|||+|.+|+-+|..|++.|.+|++++|.+
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~ 34 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNS 34 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 79999999999999999999999999999876
No 314
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=96.06 E-value=0.0039 Score=53.36 Aligned_cols=33 Identities=21% Similarity=0.380 Sum_probs=31.2
Q ss_pred CeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
.+|+|||+|.+|+-+|..|++.|.+|+++++++
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCC
Confidence 479999999999999999999999999999886
No 315
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=96.05 E-value=0.0033 Score=56.14 Aligned_cols=34 Identities=24% Similarity=0.468 Sum_probs=31.5
Q ss_pred CCeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 186 ~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
.++|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 4689999999999999999999999999999876
No 316
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.04 E-value=0.0093 Score=46.38 Aligned_cols=34 Identities=18% Similarity=0.225 Sum_probs=31.4
Q ss_pred CCcEEEECCcHHHHHHHHHHhhC-CCCeEEEecCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQ-SIPYVILEREN 40 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~-g~~v~iie~~~ 40 (303)
..+|+|||+|..|..+|..|.+. |++|+++|+++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 35899999999999999999999 99999999875
No 317
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.03 E-value=0.0059 Score=46.18 Aligned_cols=39 Identities=21% Similarity=0.246 Sum_probs=33.1
Q ss_pred CCCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 181 GKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 181 ~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
+....+++++|+|+|.+|..++..|...|.+|+++.|++
T Consensus 14 ~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 14 SKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred hcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 344557899999999999999999999999999998875
No 318
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=96.03 E-value=0.0059 Score=51.79 Aligned_cols=40 Identities=18% Similarity=0.173 Sum_probs=31.9
Q ss_pred CCCCCCCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 1 M~~~~~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
|+......+|.|||.|..|...|..|++.|++|+++|+++
T Consensus 1 M~~~~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 1 MSLTGTDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCCCCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 5444445689999999999999999999999999999875
No 319
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=96.02 E-value=0.004 Score=54.40 Aligned_cols=32 Identities=38% Similarity=0.501 Sum_probs=30.5
Q ss_pred eEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 188 NVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 188 ~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
.|+|||+|++|+-+|..|++.|.+|++++|++
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~~ 37 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRP 37 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 59999999999999999999999999999876
No 320
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=96.02 E-value=0.007 Score=51.75 Aligned_cols=39 Identities=23% Similarity=0.314 Sum_probs=31.4
Q ss_pred CCCCCCCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 1 M~~~~~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
|+. ....+|.|||+|..|...|..|++.|++|+++|+++
T Consensus 1 m~~-~~~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 1 MAS-PAAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -------CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCC-CCCceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 543 345689999999999999999999999999999875
No 321
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=95.93 E-value=0.0051 Score=51.63 Aligned_cols=33 Identities=24% Similarity=0.593 Sum_probs=31.0
Q ss_pred CeEEEECCCccHHHHHHHHhhc-cCceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANH-AAKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~-g~~vt~~~r~~ 219 (303)
.+|+|||+|.+|+.+|..|++. |.+|+++++.+
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~ 73 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSV 73 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred cCEEEECccHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 4799999999999999999997 99999999986
No 322
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=95.87 E-value=0.0061 Score=53.86 Aligned_cols=35 Identities=20% Similarity=0.377 Sum_probs=32.3
Q ss_pred CCCeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 185 GGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 185 ~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
+..+|+|||+|.+|+-+|..|++.|.+|++++|.+
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~ 56 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVK 56 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 34689999999999999999999999999999987
No 323
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=95.85 E-value=0.0063 Score=55.47 Aligned_cols=35 Identities=34% Similarity=0.495 Sum_probs=32.8
Q ss_pred CCCeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 185 GGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 185 ~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
...+|+|||+|.+|+.+|..|++.|.+|+++++.+
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~ 125 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRI 125 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEecc
Confidence 45799999999999999999999999999999986
No 324
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=95.84 E-value=0.013 Score=49.77 Aligned_cols=35 Identities=26% Similarity=0.291 Sum_probs=32.3
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
...+|.|||.|..|...|..|.+.|++|++++++.
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45689999999999999999999999999999875
No 325
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=95.81 E-value=0.0098 Score=47.74 Aligned_cols=32 Identities=22% Similarity=0.387 Sum_probs=30.5
Q ss_pred cEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 9 EVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 9 ~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
+|+|||+|..|..+|..|.+.|++|+++|+++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 69999999999999999999999999999875
No 326
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=95.74 E-value=0.0073 Score=53.21 Aligned_cols=38 Identities=24% Similarity=0.363 Sum_probs=32.5
Q ss_pred CCCeEEEECCCccHHHHHHHHhhcc--CceEEEeecCeee
Q 022090 185 GGKNVLVVGSGNSGMEIALDLANHA--AKTSLVVRSPVHV 222 (303)
Q Consensus 185 ~~~~v~ViG~G~~g~e~a~~l~~~g--~~vt~~~r~~~~~ 222 (303)
.+|+|+|||+|..|+.+|..|.+.+ .+||++++++.+.
T Consensus 1 aGKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~ 40 (401)
T 3vrd_B 1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYY 40 (401)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEE
T ss_pred CcCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCC
Confidence 3799999999999999999998876 4799999988543
No 327
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=95.72 E-value=0.0071 Score=53.26 Aligned_cols=35 Identities=31% Similarity=0.433 Sum_probs=32.5
Q ss_pred CCeEEEECCCccHHHHHHHHhhccCceEEEeecCe
Q 022090 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPV 220 (303)
Q Consensus 186 ~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~~ 220 (303)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 39 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQ 39 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 46899999999999999999999999999999873
No 328
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.71 E-value=0.014 Score=47.09 Aligned_cols=34 Identities=18% Similarity=0.279 Sum_probs=31.3
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERE 39 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~ 39 (303)
..++|+|||||..|...|..|.+.|.+|+++++.
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 3578999999999999999999999999999865
No 329
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=95.70 E-value=0.0081 Score=52.90 Aligned_cols=34 Identities=29% Similarity=0.457 Sum_probs=32.1
Q ss_pred CCeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 186 ~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
..+|+|||+|.+|+-+|..|++.|.+|++++|.+
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~ 59 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDN 59 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 4689999999999999999999999999999986
No 330
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=95.70 E-value=0.0066 Score=54.01 Aligned_cols=34 Identities=18% Similarity=0.479 Sum_probs=31.5
Q ss_pred CCeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 186 ~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
..+|+|||+|.+|+.+|..|++.|.+|+++++.+
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~ 60 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHAR 60 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4589999999999999999999999999999886
No 331
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=95.68 E-value=0.012 Score=49.38 Aligned_cols=34 Identities=15% Similarity=0.200 Sum_probs=31.6
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
..+|.|||+|..|...|..|++.|++|+++|+++
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 3689999999999999999999999999999875
No 332
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=95.65 E-value=0.0078 Score=52.80 Aligned_cols=33 Identities=33% Similarity=0.402 Sum_probs=31.0
Q ss_pred CeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
++|+|||+|..|+++|..+++.|.+|+++++++
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 479999999999999999999999999999876
No 333
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=95.63 E-value=0.0078 Score=52.61 Aligned_cols=34 Identities=24% Similarity=0.352 Sum_probs=32.0
Q ss_pred CCeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 186 ~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
..+|+|||+|.+|+.+|..|++.|.+|+++++.+
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~ 44 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSS 44 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 4689999999999999999999999999999876
No 334
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=95.61 E-value=0.012 Score=51.65 Aligned_cols=36 Identities=17% Similarity=0.255 Sum_probs=32.8
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~ 41 (303)
...+|+|||+|.+|+.+|..|...|.+|+++|++..
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 357899999999999999999999999999998763
No 335
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=95.60 E-value=0.013 Score=49.57 Aligned_cols=34 Identities=18% Similarity=0.299 Sum_probs=31.4
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
..+|.|||+|..|...|..|++.|++|+++|++.
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3579999999999999999999999999999864
No 336
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=95.59 E-value=0.0082 Score=52.74 Aligned_cols=33 Identities=27% Similarity=0.481 Sum_probs=30.9
Q ss_pred CeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
.+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~ 37 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAERGHRVLVLERHT 37 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 379999999999999999999999999999875
No 337
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=95.59 E-value=0.0078 Score=53.40 Aligned_cols=33 Identities=24% Similarity=0.337 Sum_probs=30.7
Q ss_pred CeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
++|+|||+|.+|+-+|..|++.|.+|+++++++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~ 33 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSA 33 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 379999999999999999999999999999864
No 338
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=95.56 E-value=0.0079 Score=51.97 Aligned_cols=33 Identities=24% Similarity=0.378 Sum_probs=31.1
Q ss_pred CeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
.+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~ 37 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAGGHEVLVAEAAE 37 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 479999999999999999999999999999985
No 339
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=95.56 E-value=0.014 Score=50.13 Aligned_cols=34 Identities=21% Similarity=0.310 Sum_probs=31.1
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCC-CeEEEecCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSI-PYVILEREN 40 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~-~v~iie~~~ 40 (303)
+.+|+|||+|..|.++|..|+..|+ +|+++|.+.
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 4589999999999999999999998 999999875
No 340
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=95.54 E-value=0.016 Score=49.99 Aligned_cols=40 Identities=18% Similarity=0.145 Sum_probs=33.2
Q ss_pred CCCCCCCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 1 M~~~~~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
|+..+...+|.|||.|..|-+.|..|.+.|++|+++|+++
T Consensus 2 m~~~~~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 2 MTTKDISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp ----CCSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCccCCCCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5555556789999999999999999999999999999875
No 341
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=95.52 E-value=0.0099 Score=53.98 Aligned_cols=35 Identities=29% Similarity=0.457 Sum_probs=32.2
Q ss_pred CCCeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 185 GGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 185 ~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
.+.+|+|||+|.+|+.+|..|++.|.+|+++++++
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~ 66 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASE 66 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCC
Confidence 35799999999999999999999999999998875
No 342
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=95.51 E-value=0.008 Score=53.28 Aligned_cols=32 Identities=25% Similarity=0.448 Sum_probs=30.3
Q ss_pred eEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 188 NVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 188 ~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
+|+|||+|.+|+-+|..|++.|.+|+++++++
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~ 33 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKAGHEVEVFERLP 33 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHHhCCCceEEEeCCC
Confidence 79999999999999999999999999999874
No 343
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.48 E-value=0.013 Score=52.46 Aligned_cols=36 Identities=17% Similarity=0.390 Sum_probs=32.5
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCY 42 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~~ 42 (303)
.++|+|||.|.+|+++|..|+++|++|+++|.....
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP 40 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc
Confidence 468999999999999999999999999999987643
No 344
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=95.48 E-value=0.0077 Score=52.51 Aligned_cols=33 Identities=30% Similarity=0.393 Sum_probs=31.1
Q ss_pred CeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
.+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 18 ~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~ 50 (382)
T 1ryi_A 18 YEAVVIGGGIIGSAIAYYLAKENKNTALFESGT 50 (382)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 589999999999999999999999999999865
No 345
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=95.46 E-value=0.0073 Score=52.47 Aligned_cols=33 Identities=12% Similarity=0.230 Sum_probs=30.8
Q ss_pred CeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
.+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~ 35 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHM 35 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 379999999999999999999999999999875
No 346
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=95.39 E-value=0.0097 Score=51.98 Aligned_cols=33 Identities=39% Similarity=0.508 Sum_probs=30.8
Q ss_pred CeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
.+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~ 36 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFD 36 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 479999999999999999999999999999865
No 347
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=95.38 E-value=0.014 Score=51.93 Aligned_cols=34 Identities=18% Similarity=0.285 Sum_probs=30.9
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
...+|.|||.|..|+..|..|++ |++|+++|+++
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred CCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 34689999999999999999998 99999999875
No 348
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.36 E-value=0.015 Score=52.28 Aligned_cols=35 Identities=20% Similarity=0.229 Sum_probs=32.2
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
..++|+|||.|.+|+++|..|.++|++|+++|.+.
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 35789999999999999999999999999999865
No 349
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=95.36 E-value=0.013 Score=51.06 Aligned_cols=35 Identities=14% Similarity=0.179 Sum_probs=32.4
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
...+|+|||+|..|+.+|..|...|.+|+++|++.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45789999999999999999999999999999875
No 350
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=95.35 E-value=0.0093 Score=52.34 Aligned_cols=33 Identities=21% Similarity=0.402 Sum_probs=31.1
Q ss_pred CeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
.+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 35 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQT 35 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 379999999999999999999999999999876
No 351
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=95.35 E-value=0.01 Score=52.22 Aligned_cols=33 Identities=24% Similarity=0.373 Sum_probs=31.3
Q ss_pred CeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
.+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~ 39 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVVEQAR 39 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 479999999999999999999999999999986
No 352
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=95.34 E-value=0.01 Score=51.97 Aligned_cols=33 Identities=24% Similarity=0.431 Sum_probs=30.8
Q ss_pred CeEEEECCCccHHHHHHHHhhc--cCceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANH--AAKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~--g~~vt~~~r~~ 219 (303)
.+|+|||+|.+|+-+|..|++. |.+|+++++.+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~ 35 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKND 35 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCC
Confidence 3699999999999999999999 99999999876
No 353
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=95.31 E-value=0.01 Score=51.77 Aligned_cols=33 Identities=24% Similarity=0.508 Sum_probs=31.0
Q ss_pred CeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
.+|+|||+|.+|+-+|..|++.|.+|+++++..
T Consensus 6 ~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~ 38 (382)
T 1y56_B 6 SEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRF 38 (382)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 579999999999999999999999999999874
No 354
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=95.31 E-value=0.011 Score=51.81 Aligned_cols=33 Identities=36% Similarity=0.465 Sum_probs=31.2
Q ss_pred CeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
.+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~ 37 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRP 37 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 379999999999999999999999999999986
No 355
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=95.31 E-value=0.01 Score=52.49 Aligned_cols=33 Identities=27% Similarity=0.392 Sum_probs=31.1
Q ss_pred CeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
.+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 479999999999999999999999999999875
No 356
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=95.27 E-value=0.018 Score=51.28 Aligned_cols=36 Identities=33% Similarity=0.530 Sum_probs=32.0
Q ss_pred CeEEEECCCccHHHHHHHHhhcc--CceEEEeecCeee
Q 022090 187 KNVLVVGSGNSGMEIALDLANHA--AKTSLVVRSPVHV 222 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~g--~~vt~~~r~~~~~ 222 (303)
|+|+|||+|..|+.+|..|.+.+ .+||++++++.+.
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~ 40 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFG 40 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCc
Confidence 68999999999999999999876 6799999998443
No 357
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=95.27 E-value=0.012 Score=50.97 Aligned_cols=33 Identities=36% Similarity=0.494 Sum_probs=30.8
Q ss_pred CeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
.+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 7 ~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 7 KRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 589999999999999999999999999999853
No 358
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=95.27 E-value=0.02 Score=45.65 Aligned_cols=35 Identities=17% Similarity=0.327 Sum_probs=31.7
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~ 41 (303)
..+|.|||+|..|.+.|..|.+.|++|++++++..
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 46899999999999999999999999999998764
No 359
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=95.26 E-value=0.018 Score=49.25 Aligned_cols=35 Identities=23% Similarity=0.408 Sum_probs=30.4
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCC--CeEEEecCC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSI--PYVILEREN 40 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~--~v~iie~~~ 40 (303)
.+.+|+|||+|..|.++|..|+..+. +++++|.+.
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 35689999999999999999999987 899999764
No 360
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.25 E-value=0.016 Score=46.63 Aligned_cols=37 Identities=24% Similarity=0.356 Sum_probs=33.1
Q ss_pred CCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 183 PYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 183 ~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
.+.+++|+|||+|.+|...+..|.+.|.+|+++.+..
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~ 64 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTV 64 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSC
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 3568999999999999999999999999999997643
No 361
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=95.22 E-value=0.013 Score=51.80 Aligned_cols=33 Identities=27% Similarity=0.470 Sum_probs=31.4
Q ss_pred CeEEEECCCccHHHHHHHHhhccCc-eEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANHAAK-TSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~g~~-vt~~~r~~ 219 (303)
.+|+|||+|.+|+-+|..|++.|.+ |++++|.+
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~ 38 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQAGIGKVTLLESSS 38 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 5899999999999999999999999 99999986
No 362
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=95.21 E-value=0.018 Score=49.17 Aligned_cols=33 Identities=18% Similarity=0.363 Sum_probs=31.0
Q ss_pred CcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 8 VEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
.+|+|||+|..|.+.|..|++.|.+|++++|++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 489999999999999999999999999999865
No 363
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=95.21 E-value=0.018 Score=49.04 Aligned_cols=35 Identities=20% Similarity=0.306 Sum_probs=31.1
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCC--CeEEEecCC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSI--PYVILEREN 40 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~--~v~iie~~~ 40 (303)
.+.+|+|||+|..|...|..|+..|. +|+++|++.
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 34689999999999999999999998 999999864
No 364
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=95.20 E-value=0.013 Score=48.73 Aligned_cols=35 Identities=14% Similarity=0.289 Sum_probs=32.1
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
..+.|+|||+|-.|...+..|.+.|.+|++++++.
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 35789999999999999999999999999999764
No 365
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=95.19 E-value=0.011 Score=52.46 Aligned_cols=32 Identities=38% Similarity=0.531 Sum_probs=30.1
Q ss_pred eEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 188 NVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 188 ~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
+|+|||+|.+|+-+|..|++.|.+|+++++++
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~ 34 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNAGKKVLLLEGGE 34 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECCcHHHHHHHHHHHHcCCeEEEEecCC
Confidence 69999999999999999999999999999854
No 366
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=95.18 E-value=0.019 Score=48.43 Aligned_cols=34 Identities=21% Similarity=0.352 Sum_probs=31.2
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
.+++|.|||+|..|...|..|+ .|++|+++|+++
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 3589999999999999999999 999999999875
No 367
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=95.14 E-value=0.013 Score=53.25 Aligned_cols=33 Identities=27% Similarity=0.393 Sum_probs=29.8
Q ss_pred CeEEEECCCccHHHHHHHHhhc-cCceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANH-AAKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~-g~~vt~~~r~~ 219 (303)
-.|+|||+|.+|+-+|..|++. |.+|+++++++
T Consensus 11 ~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~ 44 (513)
T 4gde_A 11 VDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNE 44 (513)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSS
T ss_pred CCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCC
Confidence 4799999999999999999985 99999998765
No 368
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=95.13 E-value=0.012 Score=53.09 Aligned_cols=33 Identities=33% Similarity=0.519 Sum_probs=30.8
Q ss_pred CeEEEECCCccHHHHHHHHhhccC--ceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANHAA--KTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~g~--~vt~~~r~~ 219 (303)
++|+|||+|.+|+-+|..|++.|. +|+++++++
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~ 37 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSE 37 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCC
Confidence 589999999999999999999999 999999865
No 369
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=95.12 E-value=0.018 Score=48.57 Aligned_cols=35 Identities=11% Similarity=0.090 Sum_probs=32.4
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~ 41 (303)
..+|.|||.|..|...|..|++.|++|+++|+++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 35899999999999999999999999999998864
No 370
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=95.11 E-value=0.022 Score=49.52 Aligned_cols=34 Identities=15% Similarity=0.267 Sum_probs=31.7
Q ss_pred CcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCC
Q 022090 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~ 41 (303)
++|+|||||..|..++..+++.|++++++|.++.
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 6899999999999999999999999999998764
No 371
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=95.10 E-value=0.022 Score=48.42 Aligned_cols=35 Identities=23% Similarity=0.231 Sum_probs=32.3
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~ 41 (303)
+.+|.|||.|..|...|..|++.|++|+++|++..
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 46899999999999999999999999999998753
No 372
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=95.10 E-value=0.015 Score=51.56 Aligned_cols=34 Identities=15% Similarity=0.433 Sum_probs=31.6
Q ss_pred CCeEEEECCCccHHHHHHHHhhcc-CceEEEeecC
Q 022090 186 GKNVLVVGSGNSGMEIALDLANHA-AKTSLVVRSP 219 (303)
Q Consensus 186 ~~~v~ViG~G~~g~e~a~~l~~~g-~~vt~~~r~~ 219 (303)
..+|+|||+|.+|+-+|..|++.| .+|+++++++
T Consensus 6 ~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~ 40 (424)
T 2b9w_A 6 DSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTD 40 (424)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCC
Confidence 468999999999999999999999 8999999875
No 373
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=95.10 E-value=0.013 Score=51.82 Aligned_cols=33 Identities=18% Similarity=0.360 Sum_probs=31.1
Q ss_pred CeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
.+|+|||+|.+|+.+|..+++.|.+|+++++.+
T Consensus 5 ~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~ 37 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGK 37 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 479999999999999999999999999999886
No 374
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=95.10 E-value=0.019 Score=51.92 Aligned_cols=34 Identities=26% Similarity=0.538 Sum_probs=31.7
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
..+|.|||+|..|+.+|..|++.|++|+++|++.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3689999999999999999999999999999864
No 375
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=95.10 E-value=0.021 Score=47.73 Aligned_cols=33 Identities=18% Similarity=0.111 Sum_probs=30.9
Q ss_pred cEEEECCcHHHHHHHHHHhhCCCCeEEEecCCC
Q 022090 9 EVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (303)
Q Consensus 9 ~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~ 41 (303)
+|.|||+|..|...|..|.+.|++|++++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 699999999999999999999999999998763
No 376
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=95.09 E-value=0.017 Score=53.20 Aligned_cols=35 Identities=17% Similarity=0.325 Sum_probs=32.9
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~ 41 (303)
.++|+|||+|.+|+.+|..|++.+.+|+++++.+.
T Consensus 185 ~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 185 GKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 47899999999999999999999999999999875
No 377
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=95.08 E-value=0.015 Score=51.05 Aligned_cols=33 Identities=24% Similarity=0.466 Sum_probs=31.0
Q ss_pred CeEEEECCCccHHHHHHHHhh-cc-CceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLAN-HA-AKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~-~g-~~vt~~~r~~ 219 (303)
.+|+|||+|.+|+-+|..|++ .| .+|+++++.+
T Consensus 22 ~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~ 56 (405)
T 2gag_B 22 YDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGW 56 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 589999999999999999999 99 9999999875
No 378
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=95.08 E-value=0.024 Score=46.41 Aligned_cols=35 Identities=26% Similarity=0.359 Sum_probs=32.2
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~ 41 (303)
.++|.|||+|..|.++|..|.+.|++|++++++..
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPK 53 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 57899999999999999999999999999998753
No 379
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=95.05 E-value=0.026 Score=48.55 Aligned_cols=32 Identities=31% Similarity=0.396 Sum_probs=30.4
Q ss_pred CcEEEECCcHHHHHHHHHHhhCCCCeEEEecC
Q 022090 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERE 39 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~ 39 (303)
.+|+|||+|..|.+.|..|++.|.+|++++++
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 58999999999999999999999999999985
No 380
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=95.01 E-value=0.012 Score=50.71 Aligned_cols=33 Identities=24% Similarity=0.252 Sum_probs=30.4
Q ss_pred CeEEEECCCccHHHHHHHHhh---ccCceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLAN---HAAKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~---~g~~vt~~~r~~ 219 (303)
.+|+|||+|.+|+-+|..|++ .|.+|+++++++
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~ 37 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKAD 37 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCC
Confidence 379999999999999999999 899999999874
No 381
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=95.01 E-value=0.028 Score=48.78 Aligned_cols=34 Identities=24% Similarity=0.282 Sum_probs=31.6
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
..+|.|||+|..|.+.|..|++.|++|+++++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3589999999999999999999999999999864
No 382
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=95.01 E-value=0.019 Score=50.19 Aligned_cols=34 Identities=21% Similarity=0.340 Sum_probs=32.1
Q ss_pred CCCeEEEECCCccHHHHHHHHhhccCceEEEeec
Q 022090 185 GGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRS 218 (303)
Q Consensus 185 ~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~ 218 (303)
.+.+|+|||+|.+|+-+|..|.+.|.+|++++++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~ 76 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEAN 76 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEecc
Confidence 4679999999999999999999999999999998
No 383
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=94.99 E-value=0.02 Score=48.70 Aligned_cols=33 Identities=30% Similarity=0.385 Sum_probs=30.5
Q ss_pred CcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 8 VEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
.+|+|||+|..|.+.|..|.+.|.+|++++|+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 489999999999999999999999999999865
No 384
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=94.98 E-value=0.018 Score=53.11 Aligned_cols=35 Identities=23% Similarity=0.451 Sum_probs=32.9
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~ 41 (303)
.++|+|||+|.+|+.+|..|++.+.+|+++++.+.
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 47899999999999999999999999999999875
No 385
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=94.97 E-value=0.014 Score=50.71 Aligned_cols=33 Identities=21% Similarity=0.369 Sum_probs=30.5
Q ss_pred CCeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 186 ~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
.++|+|||+|.+|+-+|..|+ .|.+|+++++.+
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~ 41 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS-AHGRVVVLEREA 41 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSS
T ss_pred cCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCC
Confidence 478999999999999999999 599999999975
No 386
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=94.97 E-value=0.028 Score=50.37 Aligned_cols=34 Identities=32% Similarity=0.536 Sum_probs=31.7
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
..+|.|||+|..|...|..|++.|++|+++|+++
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 87 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNE 87 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcH
Confidence 3689999999999999999999999999999875
No 387
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=94.94 E-value=0.017 Score=51.53 Aligned_cols=33 Identities=30% Similarity=0.512 Sum_probs=31.1
Q ss_pred CeEEEECCCccHHHHHHHHhhccC-ceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANHAA-KTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~g~-~vt~~~r~~ 219 (303)
.+|+|||+|.+|+-+|..|++.|. +|+++++.+
T Consensus 7 ~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~ 40 (438)
T 3dje_A 7 SSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYP 40 (438)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 579999999999999999999999 999999876
No 388
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=94.94 E-value=0.023 Score=51.05 Aligned_cols=33 Identities=21% Similarity=0.501 Sum_probs=31.2
Q ss_pred CcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 8 VEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
.+|.|||+|..|+.+|..|++.|++|+++|+++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 489999999999999999999999999999875
No 389
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=94.94 E-value=0.023 Score=49.54 Aligned_cols=35 Identities=17% Similarity=0.362 Sum_probs=31.8
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCC-CeEEEecCC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSI-PYVILEREN 40 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~-~v~iie~~~ 40 (303)
...+|+|+|||.+|+.+|..|...|. +|+++|++-
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 35689999999999999999999999 999999863
No 390
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=94.92 E-value=0.026 Score=50.57 Aligned_cols=35 Identities=29% Similarity=0.527 Sum_probs=32.6
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~ 41 (303)
..++.|||.|..|+.+|..|++.|++|+++|+++.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 36899999999999999999999999999999874
No 391
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=94.92 E-value=0.025 Score=48.21 Aligned_cols=34 Identities=15% Similarity=0.300 Sum_probs=31.1
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCC-CeEEEecCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSI-PYVILEREN 40 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~-~v~iie~~~ 40 (303)
..+|+|||+|..|..+|..|+..|+ +|+++|++.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 3589999999999999999999998 999999865
No 392
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=94.90 E-value=0.024 Score=48.01 Aligned_cols=33 Identities=15% Similarity=0.259 Sum_probs=30.8
Q ss_pred CcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 8 VEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
.+|.|||+|..|...|..|.+.|++|++++++.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 489999999999999999999999999999864
No 393
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=94.89 E-value=0.017 Score=49.85 Aligned_cols=32 Identities=22% Similarity=0.325 Sum_probs=30.0
Q ss_pred eEEEECCCccHHHHHHHHhhcc------CceEEEeecC
Q 022090 188 NVLVVGSGNSGMEIALDLANHA------AKTSLVVRSP 219 (303)
Q Consensus 188 ~v~ViG~G~~g~e~a~~l~~~g------~~vt~~~r~~ 219 (303)
+|+|||+|.+|+-+|..|++.| .+|+++++.+
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 6999999999999999999998 8999999875
No 394
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=94.88 E-value=0.028 Score=50.11 Aligned_cols=35 Identities=17% Similarity=0.178 Sum_probs=32.2
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
.+.+|.|||.|+.||.+|..|++.|++|+.+|-+.
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 35689999999999999999999999999999765
No 395
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=94.88 E-value=0.015 Score=52.38 Aligned_cols=34 Identities=38% Similarity=0.557 Sum_probs=31.3
Q ss_pred CCeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 186 ~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
..+|+|||+|.+|+-+|..|++.|.+|+++++++
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~ 49 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSA 49 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 5689999999999999999999999999999876
No 396
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.88 E-value=0.023 Score=47.26 Aligned_cols=36 Identities=25% Similarity=0.412 Sum_probs=32.7
Q ss_pred CCCCeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 184 YGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 184 ~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
+++++|+|||+|.+|...+..|.+.|++|+++....
T Consensus 11 l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 11 LKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp CTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred cCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 457999999999999999999999999999997654
No 397
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=94.86 E-value=0.019 Score=52.01 Aligned_cols=34 Identities=24% Similarity=0.448 Sum_probs=31.4
Q ss_pred CCeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 186 ~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
..+|+|||+|.+|+-+|..|++.|.+|+++++++
T Consensus 11 ~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~ 44 (489)
T 2jae_A 11 SHSVVVLGGGPAGLCSAFELQKAGYKVTVLEART 44 (489)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccC
Confidence 5689999999999999999999999999998764
No 398
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=94.85 E-value=0.013 Score=43.69 Aligned_cols=34 Identities=21% Similarity=0.331 Sum_probs=30.9
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
..+|+|||+|..|..+|..|.+.|.+|++++++.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 4689999999999999999999999999998864
No 399
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=94.84 E-value=0.014 Score=52.48 Aligned_cols=33 Identities=33% Similarity=0.516 Sum_probs=31.2
Q ss_pred CeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
.+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~ 39 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKP 39 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 479999999999999999999999999999976
No 400
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=94.83 E-value=0.011 Score=53.07 Aligned_cols=33 Identities=30% Similarity=0.570 Sum_probs=31.0
Q ss_pred CeEEEECCCccHHHHHHHHhhcc------CceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANHA------AKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~g------~~vt~~~r~~ 219 (303)
.+|+|||+|.+|+-+|..|++.| .+|+++++++
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~ 44 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASP 44 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCC
Confidence 58999999999999999999999 8999999874
No 401
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=94.80 E-value=0.028 Score=47.36 Aligned_cols=33 Identities=21% Similarity=0.310 Sum_probs=30.9
Q ss_pred CcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 8 VEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
.+|+|||+|..|.+.|..|.+.|.+|++++|+.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 489999999999999999999999999999874
No 402
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=94.79 E-value=0.017 Score=52.64 Aligned_cols=33 Identities=27% Similarity=0.449 Sum_probs=30.8
Q ss_pred CeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
..|+|||+|.+|+-+|..|+++|.+|+++++.+
T Consensus 4 ~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~ 36 (501)
T 2qcu_A 4 KDLIVIGGGINGAGIAADAAGRGLSVLMLEAQD 36 (501)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEECCC
Confidence 479999999999999999999999999999864
No 403
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=94.79 E-value=0.039 Score=44.17 Aligned_cols=34 Identities=21% Similarity=0.188 Sum_probs=30.8
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
..+|.|||+|..|...|..|.+.|++|++++++.
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999864
No 404
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=94.79 E-value=0.017 Score=51.85 Aligned_cols=33 Identities=18% Similarity=0.214 Sum_probs=31.5
Q ss_pred CeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
.+|+|||+|.+|+-+|..|++.|.+|+++++++
T Consensus 12 ~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~ 44 (453)
T 2bcg_G 12 YDVIVLGTGITECILSGLLSVDGKKVLHIDKQD 44 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 579999999999999999999999999999987
No 405
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.78 E-value=0.03 Score=42.10 Aligned_cols=34 Identities=15% Similarity=0.330 Sum_probs=31.4
Q ss_pred CCeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 186 ~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
.++++|+|+|.+|..++..|.+.|.+|+++.+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 4689999999999999999999999999999874
No 406
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=94.78 E-value=0.027 Score=49.73 Aligned_cols=34 Identities=21% Similarity=0.334 Sum_probs=31.6
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
..+|+|||+|.+|+.+|..|...|.+|+++|++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 5689999999999999999999999999999865
No 407
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=94.74 E-value=0.028 Score=53.38 Aligned_cols=34 Identities=21% Similarity=0.310 Sum_probs=31.5
Q ss_pred CCeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 186 ~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 264 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~ 297 (689)
T 3pvc_A 264 CDDIAIIGGGIVSALTALALQRRGAVVTLYCADA 297 (689)
T ss_dssp CSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSS
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4689999999999999999999999999999863
No 408
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=94.73 E-value=0.025 Score=51.05 Aligned_cols=35 Identities=14% Similarity=0.201 Sum_probs=32.6
Q ss_pred CCcEEEECCcHHHHHHHHHHhhC-CC-CeEEEecCCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQ-SI-PYVILERENC 41 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~-g~-~v~iie~~~~ 41 (303)
..+|.|||+|..|+.+|..|++. |+ +|+++|++..
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 46899999999999999999999 99 9999999865
No 409
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=94.71 E-value=0.037 Score=46.74 Aligned_cols=41 Identities=17% Similarity=0.239 Sum_probs=32.3
Q ss_pred CCCCCCCCcEEEECC-cHHHHHHHHHHhhCCCCeEEEecCCC
Q 022090 1 MKEQAAGVEVIMVGA-GTSGLATAACLSLQSIPYVILERENC 41 (303)
Q Consensus 1 M~~~~~~~~vvIIGa-G~aGl~~A~~l~~~g~~v~iie~~~~ 41 (303)
|.....+++|+|.|| |..|..++..|.+.|++|+++++...
T Consensus 1 M~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 1 MQRNTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp ------CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCcccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 544344678999999 99999999999999999999998654
No 410
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=94.69 E-value=0.029 Score=48.79 Aligned_cols=34 Identities=24% Similarity=0.386 Sum_probs=31.4
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCC-CeEEEecC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSI-PYVILERE 39 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~-~v~iie~~ 39 (303)
...+|+|+|||.+|..+|+.|...|. +|+++|+.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 45799999999999999999999998 79999987
No 411
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=94.69 E-value=0.036 Score=47.39 Aligned_cols=34 Identities=18% Similarity=0.381 Sum_probs=30.8
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCC-CeEEEecCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSI-PYVILEREN 40 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~-~v~iie~~~ 40 (303)
..+|+|||+|..|..+|..|+..|+ +|+++|.+.
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 3589999999999999999999998 899999764
No 412
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=94.67 E-value=0.03 Score=46.93 Aligned_cols=34 Identities=24% Similarity=0.208 Sum_probs=31.5
Q ss_pred CcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCC
Q 022090 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~ 41 (303)
++|.|||.|..|...|..|.+.|++|++++++..
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 4799999999999999999999999999998753
No 413
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=94.65 E-value=0.02 Score=50.63 Aligned_cols=33 Identities=24% Similarity=0.339 Sum_probs=30.7
Q ss_pred CeEEEECCCccHHHHHHHHhhc--cCceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANH--AAKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~--g~~vt~~~r~~ 219 (303)
.+|+|||+|.+|+-+|..|++. |.+|+++++.+
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~ 71 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGG 71 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 4799999999999999999999 99999999864
No 414
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=94.64 E-value=0.02 Score=51.35 Aligned_cols=33 Identities=30% Similarity=0.494 Sum_probs=31.2
Q ss_pred CeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
.+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~ 59 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGN 59 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 479999999999999999999999999999876
No 415
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=94.62 E-value=0.02 Score=53.15 Aligned_cols=33 Identities=27% Similarity=0.478 Sum_probs=30.9
Q ss_pred CeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
..|+|||+|.+|+-+|..|+++|.+|+++++.+
T Consensus 33 ~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~ 65 (571)
T 2rgh_A 33 LDLLIIGGGITGAGVAVQAAASGIKTGLIEMQD 65 (571)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 579999999999999999999999999999864
No 416
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.62 E-value=0.036 Score=40.99 Aligned_cols=34 Identities=21% Similarity=0.254 Sum_probs=31.9
Q ss_pred CCeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 186 ~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
.++++|+|.|..|..+|..|.+.|.+|+++.+++
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 4789999999999999999999999999999886
No 417
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=94.61 E-value=0.028 Score=51.73 Aligned_cols=34 Identities=26% Similarity=0.351 Sum_probs=32.1
Q ss_pred CCeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 186 ~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
..+|+|||+|.+|+.+|..|++.|.+|+++++.+
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~ 140 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGK 140 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccC
Confidence 4689999999999999999999999999999986
No 418
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=94.59 E-value=0.024 Score=51.67 Aligned_cols=34 Identities=26% Similarity=0.456 Sum_probs=31.9
Q ss_pred CCeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 186 ~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
..+|+|||+|.+|+-+|..|++.|.+|++++|.+
T Consensus 12 ~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~ 45 (499)
T 2qa2_A 12 DASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLP 45 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 3589999999999999999999999999999976
No 419
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=94.58 E-value=0.036 Score=48.67 Aligned_cols=35 Identities=17% Similarity=0.247 Sum_probs=31.9
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
...+|+|||+|.+|+.++..|...|.+|+++|++.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35789999999999999999999999999999865
No 420
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=94.58 E-value=0.026 Score=47.37 Aligned_cols=34 Identities=21% Similarity=0.211 Sum_probs=31.4
Q ss_pred CcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCC
Q 022090 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~ 41 (303)
.+|.|||.|..|...|..|.+.|++|+++++++.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 4799999999999999999999999999998763
No 421
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=94.58 E-value=0.031 Score=46.24 Aligned_cols=34 Identities=18% Similarity=0.334 Sum_probs=30.8
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCC-eEEEecCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIP-YVILEREN 40 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~-v~iie~~~ 40 (303)
..+|.|||+|..|...|..|.+.|++ |.+++++.
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 46899999999999999999999999 89998864
No 422
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=94.58 E-value=0.029 Score=53.10 Aligned_cols=33 Identities=15% Similarity=0.309 Sum_probs=31.0
Q ss_pred CCeEEEECCCccHHHHHHHHhhccCceEEEeec
Q 022090 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVVRS 218 (303)
Q Consensus 186 ~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~ 218 (303)
..+|+|||+|.+|+-+|..|++.|.+|+++++.
T Consensus 272 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~ 304 (676)
T 3ps9_A 272 KREAAIIGGGIASALLSLALLRRGWQVTLYCAD 304 (676)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 368999999999999999999999999999985
No 423
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=94.57 E-value=0.022 Score=53.23 Aligned_cols=34 Identities=32% Similarity=0.455 Sum_probs=31.4
Q ss_pred CCeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 186 ~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
.-.|+|||+|..|+++|..+++.|.+|+++++.+
T Consensus 21 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~ 54 (641)
T 3cp8_A 21 MYDVIVVGAGHAGCEAALAVARGGLHCLLITSDL 54 (641)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEEecc
Confidence 3589999999999999999999999999999874
No 424
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=94.56 E-value=0.016 Score=46.93 Aligned_cols=35 Identities=26% Similarity=0.327 Sum_probs=30.5
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~ 41 (303)
...+|+|+|+|..|..+|..|.+.|+ |+++|+++.
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHH
Confidence 45689999999999999999999999 999998753
No 425
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=94.55 E-value=0.034 Score=47.72 Aligned_cols=34 Identities=21% Similarity=0.324 Sum_probs=31.4
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
+.+|.|||+|..|.+.|..|.+.|++|++++++.
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 3689999999999999999999999999998864
No 426
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=94.55 E-value=0.027 Score=51.34 Aligned_cols=34 Identities=29% Similarity=0.415 Sum_probs=31.9
Q ss_pred CCeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 186 ~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
..+|+|||+|.+|+-+|..|++.|.+|++++|.+
T Consensus 11 ~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~ 44 (500)
T 2qa1_A 11 DAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLV 44 (500)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 3589999999999999999999999999999986
No 427
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=94.54 E-value=0.023 Score=53.16 Aligned_cols=33 Identities=27% Similarity=0.486 Sum_probs=30.9
Q ss_pred CeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
-.|+|||+|..|+++|..+++.|.+|+++++.+
T Consensus 29 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~ 61 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNI 61 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CCEEEECChHHHHHHHHHHHhCCCCEEEEeecc
Confidence 489999999999999999999999999999874
No 428
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=94.53 E-value=0.021 Score=52.20 Aligned_cols=33 Identities=30% Similarity=0.358 Sum_probs=30.9
Q ss_pred CeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
.+|+|||+|.+|+-+|..|++.|.+|+++++++
T Consensus 5 ~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 37 (520)
T 1s3e_A 5 CDVVVVGGGISGMAAAKLLHDSGLNVVVLEARD 37 (520)
T ss_dssp CSEEEECCBHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 579999999999999999999999999998865
No 429
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=94.52 E-value=0.04 Score=47.24 Aligned_cols=34 Identities=18% Similarity=0.306 Sum_probs=31.1
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCC-CeEEEecCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSI-PYVILEREN 40 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~-~v~iie~~~ 40 (303)
+.+|+|||+|..|..+|..|+..|+ +|+++|.+.
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 3589999999999999999999998 999999875
No 430
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=94.52 E-value=0.026 Score=51.82 Aligned_cols=34 Identities=29% Similarity=0.445 Sum_probs=31.4
Q ss_pred CCeEEEECCCccHHHHHHHHhh---ccCceEEEeecC
Q 022090 186 GKNVLVVGSGNSGMEIALDLAN---HAAKTSLVVRSP 219 (303)
Q Consensus 186 ~~~v~ViG~G~~g~e~a~~l~~---~g~~vt~~~r~~ 219 (303)
..+|+|||+|.+|+-+|..|++ .|.+|+++++.+
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCC
Confidence 3689999999999999999999 899999999865
No 431
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=94.51 E-value=0.022 Score=52.27 Aligned_cols=33 Identities=39% Similarity=0.613 Sum_probs=31.5
Q ss_pred CeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
.+|+|||+|.+|+-+|..|++.|.+|++++|.+
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~ 38 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLARQGVRVLVVERRP 38 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 589999999999999999999999999999987
No 432
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=94.51 E-value=0.025 Score=49.60 Aligned_cols=33 Identities=30% Similarity=0.513 Sum_probs=30.7
Q ss_pred CeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
.+|+|||+|.+|+-+|..|++.|.+|+++++++
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~ 36 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRD 36 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEEecC
Confidence 489999999999999999999999999999865
No 433
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=94.49 E-value=0.036 Score=47.94 Aligned_cols=33 Identities=24% Similarity=0.337 Sum_probs=30.8
Q ss_pred CcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 8 VEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
.+|+|||+|..|...|..|.+.|++|++++++.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 589999999999999999999999999999864
No 434
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=94.48 E-value=0.04 Score=49.65 Aligned_cols=34 Identities=26% Similarity=0.296 Sum_probs=31.3
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
..+|.|||+|..|...|..|++.|++|+++|++.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3579999999999999999999999999999865
No 435
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=94.47 E-value=0.022 Score=52.04 Aligned_cols=33 Identities=21% Similarity=0.431 Sum_probs=30.8
Q ss_pred CeEEEECCCccHHHHHHHHhhcc-CceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANHA-AKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~g-~~vt~~~r~~ 219 (303)
.+|+|||+|.+|+-+|..|++.| .+|+++++++
T Consensus 9 ~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~ 42 (516)
T 1rsg_A 9 KKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARD 42 (516)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCC
Confidence 58999999999999999999999 9999998865
No 436
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=94.46 E-value=0.023 Score=51.90 Aligned_cols=33 Identities=24% Similarity=0.393 Sum_probs=31.3
Q ss_pred CeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
.+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~ 40 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHRVLLLEREA 40 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEccCC
Confidence 479999999999999999999999999999986
No 437
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=94.45 E-value=0.031 Score=47.72 Aligned_cols=34 Identities=21% Similarity=0.354 Sum_probs=31.6
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
..+|.|||.|..|...|..|.+.|++|++++++.
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 4589999999999999999999999999999875
No 438
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=94.44 E-value=0.045 Score=49.52 Aligned_cols=34 Identities=18% Similarity=0.259 Sum_probs=31.6
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
..+|.|||+|..|...|..|++.|++|+++|++.
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4589999999999999999999999999999875
No 439
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=94.39 E-value=0.024 Score=50.66 Aligned_cols=31 Identities=26% Similarity=0.298 Sum_probs=29.8
Q ss_pred CeEEEECCCccHHHHHHHHhhcc-CceEEEee
Q 022090 187 KNVLVVGSGNSGMEIALDLANHA-AKTSLVVR 217 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~g-~~vt~~~r 217 (303)
.+|+|||+|.+|+-+|..|++.| .+|+++++
T Consensus 24 ~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~ 55 (448)
T 3axb_A 24 FDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDA 55 (448)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCSCEEEEES
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCcEEEEcc
Confidence 58999999999999999999999 99999998
No 440
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=94.36 E-value=0.029 Score=52.22 Aligned_cols=34 Identities=24% Similarity=0.392 Sum_probs=31.9
Q ss_pred CCeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 186 ~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~ 56 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSA 56 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCC
Confidence 4699999999999999999999999999999884
No 441
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=94.36 E-value=0.025 Score=52.11 Aligned_cols=33 Identities=36% Similarity=0.620 Sum_probs=31.3
Q ss_pred CeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
.+|+|||+|.+|+-+|..|++.|.+|++++|.+
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~ 59 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAHRQVGHLVVEQTD 59 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 479999999999999999999999999999986
No 442
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=94.35 E-value=0.026 Score=52.67 Aligned_cols=33 Identities=39% Similarity=0.603 Sum_probs=30.9
Q ss_pred CeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
-.|+|||+|..|+++|..+++.|.+|.++++.+
T Consensus 28 yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~ 60 (637)
T 2zxi_A 28 FDVVVIGGGHAGIEAALAAARMGAKTAMFVLNA 60 (637)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEEecc
Confidence 579999999999999999999999999999874
No 443
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=94.35 E-value=0.024 Score=52.48 Aligned_cols=33 Identities=36% Similarity=0.648 Sum_probs=31.3
Q ss_pred CeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
.+|+|||+|.+|+.+|..+++.|.+|+++++.+
T Consensus 127 ~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~ 159 (571)
T 1y0p_A 127 VDVVVVGSGGAGFSAAISATDSGAKVILIEKEP 159 (571)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 589999999999999999999999999999876
No 444
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=94.34 E-value=0.035 Score=45.57 Aligned_cols=34 Identities=24% Similarity=0.430 Sum_probs=31.1
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCC-CeEEEecCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSI-PYVILEREN 40 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~-~v~iie~~~ 40 (303)
..+|+|||+|-.|..+|..|++.|+ +++++|++.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 3689999999999999999999998 899999875
No 445
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=94.33 E-value=0.021 Score=51.47 Aligned_cols=34 Identities=24% Similarity=0.420 Sum_probs=31.7
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
.++|+|+|+|-.|..+|..|...|++|+++|+++
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 3589999999999999999999999999999875
No 446
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=94.33 E-value=0.028 Score=51.97 Aligned_cols=33 Identities=36% Similarity=0.506 Sum_probs=31.0
Q ss_pred CeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
-.|+|||+|.+|+-+|..|+++|.+|+++++.+
T Consensus 19 ~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~d 51 (561)
T 3da1_A 19 LDLLVIGGGITGAGIALDAQVRGIQTGLVEMND 51 (561)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCcEEEEECCC
Confidence 479999999999999999999999999999874
No 447
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=94.33 E-value=0.033 Score=51.31 Aligned_cols=34 Identities=26% Similarity=0.370 Sum_probs=31.5
Q ss_pred CCeEEEECCCccHHHHHHHHhh---ccCceEEEeecC
Q 022090 186 GKNVLVVGSGNSGMEIALDLAN---HAAKTSLVVRSP 219 (303)
Q Consensus 186 ~~~v~ViG~G~~g~e~a~~l~~---~g~~vt~~~r~~ 219 (303)
..+|+|||+|..|+-+|..|++ .|.+|+++++.+
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 61 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPD 61 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCC
Confidence 4689999999999999999999 899999999865
No 448
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.30 E-value=0.045 Score=46.88 Aligned_cols=35 Identities=11% Similarity=0.043 Sum_probs=31.2
Q ss_pred CCcEEEECCcHHHHH-HHHHHhhCCCCeEEEecCCC
Q 022090 7 GVEVIMVGAGTSGLA-TAACLSLQSIPYVILERENC 41 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~-~A~~l~~~g~~v~iie~~~~ 41 (303)
.++|.|||.|.+|++ +|..|.++|++|++.|+...
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 468999999999996 78889999999999998753
No 449
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=94.30 E-value=0.024 Score=51.69 Aligned_cols=33 Identities=27% Similarity=0.406 Sum_probs=29.7
Q ss_pred CeEEEECCCccHHHHHHHHhh---ccCceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLAN---HAAKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~---~g~~vt~~~r~~ 219 (303)
.+|+|||+|.+|+-+|..|++ .|.+|+++++.+
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~ 38 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGN 38 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCC
Confidence 589999999999999999999 999999999875
No 450
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=94.28 E-value=0.027 Score=52.17 Aligned_cols=33 Identities=24% Similarity=0.376 Sum_probs=30.9
Q ss_pred CeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
..|+|||+|.+|+-+|..|++.|.+|++++|.+
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~ 82 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAGGVGALVLEKLV 82 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 479999999999999999999999999999986
No 451
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=94.27 E-value=0.048 Score=47.43 Aligned_cols=34 Identities=18% Similarity=0.202 Sum_probs=31.4
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
..+|+|+|+|.+|..++..|+..|.+|++++++.
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4689999999999999999999999999999864
No 452
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=94.27 E-value=0.029 Score=50.88 Aligned_cols=34 Identities=29% Similarity=0.441 Sum_probs=31.7
Q ss_pred CCeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 186 ~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
..+|+|||+|.+|+-+|..|++.|.+|+++++++
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~ 46 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEG 46 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCC
Confidence 4689999999999999999999999999998876
No 453
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=94.26 E-value=0.056 Score=49.07 Aligned_cols=47 Identities=23% Similarity=0.221 Sum_probs=31.5
Q ss_pred HHcCCCceeEeCeEEEEEEEeCCCCeEEEEEeecCCCCceeEEEEeeCEEEEccCCCCCCC
Q 022090 92 SHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPF 152 (303)
Q Consensus 92 ~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIlAtG~~~~p~ 152 (303)
++.|+.+ ++++.|+++..++ ....+.+.++ .+ +.+|.||+|+| ..|+
T Consensus 268 ~~~GV~v--~~~~~v~~i~~~~--~v~~v~~~~g-------~~-i~aD~Vv~a~G--~~p~ 314 (493)
T 1y56_A 268 ERWGIDY--VHIPNVKRVEGNE--KVERVIDMNN-------HE-YKVDALIFADG--RRPD 314 (493)
T ss_dssp HHHTCEE--EECSSEEEEECSS--SCCEEEETTC-------CE-EECSEEEECCC--EEEC
T ss_pred HhCCcEE--EeCCeeEEEecCC--ceEEEEeCCC-------eE-EEeCEEEECCC--cCcC
Confidence 4456555 8888888886543 3344555443 57 89999999999 4444
No 454
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=94.26 E-value=0.043 Score=46.50 Aligned_cols=32 Identities=31% Similarity=0.497 Sum_probs=29.7
Q ss_pred cEEEECCcHHHHHHHHHHhhCCC--CeEEEecCC
Q 022090 9 EVIMVGAGTSGLATAACLSLQSI--PYVILEREN 40 (303)
Q Consensus 9 ~vvIIGaG~aGl~~A~~l~~~g~--~v~iie~~~ 40 (303)
+|+|||+|..|.++|..|+..|+ +|+++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 79999999999999999999998 899999864
No 455
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=94.25 E-value=0.054 Score=47.96 Aligned_cols=34 Identities=29% Similarity=0.490 Sum_probs=31.7
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
..+|+|||.|..|..+|..|.+.|++|+++|+++
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 4579999999999999999999999999999875
No 456
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.18 E-value=0.034 Score=41.06 Aligned_cols=34 Identities=24% Similarity=0.334 Sum_probs=31.6
Q ss_pred CCeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 186 ~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
.++++|+|+|..|..++..|.+.|.+|+++.+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4689999999999999999999999999998876
No 457
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=94.15 E-value=0.031 Score=49.97 Aligned_cols=33 Identities=24% Similarity=0.446 Sum_probs=30.7
Q ss_pred CeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
.+|+|||+|.+|+-+|..|++.|.+|+++++++
T Consensus 6 ~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~ 38 (453)
T 2yg5_A 6 RDVAIVGAGPSGLAAATALRKAGLSVAVIEARD 38 (453)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEECCC
Confidence 579999999999999999999999999998864
No 458
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=94.13 E-value=0.033 Score=49.12 Aligned_cols=34 Identities=35% Similarity=0.550 Sum_probs=31.1
Q ss_pred CCeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 186 ~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
..+++|||+|.+|+-+|..|++.|.+|+++++++
T Consensus 29 ~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~ 62 (397)
T 3hdq_A 29 GFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRP 62 (397)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCceEEEeccC
Confidence 3589999999999999999999999999998765
No 459
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=94.10 E-value=0.028 Score=39.78 Aligned_cols=34 Identities=26% Similarity=0.276 Sum_probs=31.0
Q ss_pred CCeEEEECCCccHHHHHHHHhhcc-CceEEEeecC
Q 022090 186 GKNVLVVGSGNSGMEIALDLANHA-AKTSLVVRSP 219 (303)
Q Consensus 186 ~~~v~ViG~G~~g~e~a~~l~~~g-~~vt~~~r~~ 219 (303)
.++++|+|+|.+|..++..|.+.| .+|+++.|++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 468999999999999999999999 8899988875
No 460
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=94.10 E-value=0.034 Score=47.85 Aligned_cols=33 Identities=21% Similarity=0.460 Sum_probs=30.8
Q ss_pred CeEEEECCCccHHHHHHHHhhc--cCceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANH--AAKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~--g~~vt~~~r~~ 219 (303)
..|+|||+|.+|+-+|..|++. |.+|+++++.+
T Consensus 80 ~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~ 114 (344)
T 3jsk_A 80 TDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGV 114 (344)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSS
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCC
Confidence 4799999999999999999998 99999999875
No 461
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=94.09 E-value=0.034 Score=44.66 Aligned_cols=34 Identities=29% Similarity=0.386 Sum_probs=30.6
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEE-EecCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVI-LEREN 40 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~i-ie~~~ 40 (303)
+.+|.|||+|..|.+.|..|.+.|++|++ ++++.
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 35899999999999999999999999998 77754
No 462
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=94.08 E-value=0.069 Score=45.32 Aligned_cols=34 Identities=15% Similarity=0.181 Sum_probs=31.3
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
..+|.|||+|..|...|..|.+.|++|++++++.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3689999999999999999999999999999865
No 463
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=94.08 E-value=0.035 Score=49.65 Aligned_cols=32 Identities=22% Similarity=0.398 Sum_probs=30.2
Q ss_pred cEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 9 EVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 9 ~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
+|.|||+|..|+..|..|++.|++|+++|++.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 69999999999999999999999999999864
No 464
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=94.08 E-value=0.059 Score=45.87 Aligned_cols=33 Identities=27% Similarity=0.413 Sum_probs=30.8
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCC-CeEEEecC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSI-PYVILERE 39 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~-~v~iie~~ 39 (303)
..+|+|||+|..|.++|..|+..|+ +++++|.+
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 4689999999999999999999999 99999986
No 465
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=94.07 E-value=0.031 Score=51.77 Aligned_cols=33 Identities=36% Similarity=0.613 Sum_probs=31.1
Q ss_pred CeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
-.|+|||+|.+|+-+|..+++.|.+|+++++.+
T Consensus 122 ~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~ 154 (566)
T 1qo8_A 122 TQVLVVGAGSAGFNASLAAKKAGANVILVDKAP 154 (566)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 479999999999999999999999999999876
No 466
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=94.06 E-value=0.04 Score=46.53 Aligned_cols=34 Identities=15% Similarity=0.191 Sum_probs=31.5
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
+.+|.|||.|..|...|..|.+.|++|++++++.
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 3589999999999999999999999999999875
No 467
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=94.05 E-value=0.038 Score=40.41 Aligned_cols=33 Identities=18% Similarity=0.343 Sum_probs=30.4
Q ss_pred CeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
.+++|+|+|..|..++..|.+.|.+|+++.|++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 589999999999999999999999999998865
No 468
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=94.03 E-value=0.032 Score=47.64 Aligned_cols=34 Identities=29% Similarity=0.474 Sum_probs=30.1
Q ss_pred CCeEEEECCCccHHHHHHHHhh--ccCceEEEeecC
Q 022090 186 GKNVLVVGSGNSGMEIALDLAN--HAAKTSLVVRSP 219 (303)
Q Consensus 186 ~~~v~ViG~G~~g~e~a~~l~~--~g~~vt~~~r~~ 219 (303)
...|+|||+|+.|+-+|..|++ .|.+|+++++.+
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~ 100 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSV 100 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 4579999999999999999975 499999999875
No 469
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=94.03 E-value=0.036 Score=48.25 Aligned_cols=32 Identities=25% Similarity=0.340 Sum_probs=29.8
Q ss_pred eEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 188 NVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 188 ~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
+++|||+|.+|+-+|..|++.|.+|+++++++
T Consensus 3 ~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~ 34 (367)
T 1i8t_A 3 DYIIVGSGLFGAVCANELKKLNKKVLVIEKRN 34 (367)
T ss_dssp EEEEECCSHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHhCCCcEEEEecCC
Confidence 68999999999999999999999999998864
No 470
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=94.01 E-value=0.043 Score=46.68 Aligned_cols=33 Identities=15% Similarity=0.214 Sum_probs=30.6
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCC-CeEEEecC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSI-PYVILERE 39 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~-~v~iie~~ 39 (303)
..+|.|||.|..|...|..|.+.|+ +|++++++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 4689999999999999999999999 99999986
No 471
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=94.00 E-value=0.032 Score=49.17 Aligned_cols=33 Identities=33% Similarity=0.518 Sum_probs=30.7
Q ss_pred CeEEEECCCccHHHHHHHHhhc-cCceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANH-AAKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~-g~~vt~~~r~~ 219 (303)
.+|+|||+|.+|+-+|..|++. |.+|+++++++
T Consensus 8 ~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~ 41 (399)
T 1v0j_A 8 FDLFVVGSGFFGLTIAERVATQLDKRVLVLERRP 41 (399)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 5899999999999999999999 99999998775
No 472
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=93.98 E-value=0.034 Score=47.56 Aligned_cols=32 Identities=31% Similarity=0.561 Sum_probs=30.3
Q ss_pred eEEEECCCccHHHHHHHHhhc--cCceEEEeecC
Q 022090 188 NVLVVGSGNSGMEIALDLANH--AAKTSLVVRSP 219 (303)
Q Consensus 188 ~v~ViG~G~~g~e~a~~l~~~--g~~vt~~~r~~ 219 (303)
+|+|||+|.+|+-+|..|++. |.+|+++++.+
T Consensus 67 dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~ 100 (326)
T 2gjc_A 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSV 100 (326)
T ss_dssp SEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSS
T ss_pred CEEEECccHHHHHHHHHHHhcCCCCeEEEEecCc
Confidence 799999999999999999998 99999999865
No 473
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=93.96 E-value=0.039 Score=40.52 Aligned_cols=35 Identities=23% Similarity=0.226 Sum_probs=31.0
Q ss_pred CCCeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 185 GGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 185 ~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
..++++|+|+|.+|..++..|.+.|.+|+++.+++
T Consensus 5 ~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 5 KNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred cCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35789999999999999999999999999988764
No 474
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=93.96 E-value=0.067 Score=44.74 Aligned_cols=33 Identities=18% Similarity=0.202 Sum_probs=30.9
Q ss_pred CcEEEECC-cHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 8 VEVIMVGA-GTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 8 ~~vvIIGa-G~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
.+|.|||+ |..|...|..|.+.|++|++++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 58999999 9999999999999999999999864
No 475
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=93.95 E-value=0.053 Score=46.23 Aligned_cols=33 Identities=21% Similarity=0.405 Sum_probs=0.0
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERE 39 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~ 39 (303)
...+|+|||+|..|.+.|..|++.|.+|+++ ++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
No 476
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=93.94 E-value=0.055 Score=46.96 Aligned_cols=34 Identities=18% Similarity=0.252 Sum_probs=31.7
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
..+|.|||.|..|...|..|.+.|++|++++++.
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3689999999999999999999999999999875
No 477
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=93.94 E-value=0.071 Score=47.33 Aligned_cols=36 Identities=19% Similarity=0.228 Sum_probs=32.2
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~ 41 (303)
+.++|+|+|+|..|..++..+.+.|++|+++|.++.
T Consensus 34 ~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~ 69 (419)
T 4e4t_A 34 PGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPA 69 (419)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 456899999999999999999999999999987643
No 478
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=93.92 E-value=0.065 Score=44.46 Aligned_cols=34 Identities=29% Similarity=0.375 Sum_probs=31.3
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
.++++|||+|-+|.++|..|.+.|.+|+++.|+.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999998875
No 479
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=93.92 E-value=0.08 Score=44.02 Aligned_cols=34 Identities=26% Similarity=0.344 Sum_probs=31.4
Q ss_pred CcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCC
Q 022090 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~ 41 (303)
++|+|.|+|..|..++..|.+.|++|+++.|+..
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 5899999999999999999999999999998753
No 480
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=93.90 E-value=0.037 Score=50.68 Aligned_cols=34 Identities=24% Similarity=0.298 Sum_probs=31.3
Q ss_pred CCeEEEECCCccHHHHHHHHhh------------ccCceEEEeecC
Q 022090 186 GKNVLVVGSGNSGMEIALDLAN------------HAAKTSLVVRSP 219 (303)
Q Consensus 186 ~~~v~ViG~G~~g~e~a~~l~~------------~g~~vt~~~r~~ 219 (303)
..+|+|||+|.+|+-+|..|++ .|.+|+++++.+
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~ 52 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPD 52 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCC
Confidence 4689999999999999999999 899999999865
No 481
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=93.89 E-value=0.034 Score=50.07 Aligned_cols=33 Identities=21% Similarity=0.343 Sum_probs=30.8
Q ss_pred CeEEEECCCccHHHHHHHHhhcc--CceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANHA--AKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~g--~~vt~~~r~~ 219 (303)
.+|+|||+|.+|+-+|..|++.| .+|+++++++
T Consensus 5 ~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~ 39 (475)
T 3lov_A 5 KRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGE 39 (475)
T ss_dssp CEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSS
T ss_pred ccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence 58999999999999999999999 8999999865
No 482
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=93.88 E-value=0.063 Score=46.81 Aligned_cols=34 Identities=24% Similarity=0.311 Sum_probs=31.5
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
..+|+|+|+|..|..+|..|+..|.+|+++|++.
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4689999999999999999999999999999864
No 483
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=93.88 E-value=0.055 Score=45.85 Aligned_cols=32 Identities=25% Similarity=0.411 Sum_probs=29.9
Q ss_pred CcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 8 VEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
.+|+|||+|..|.+.|..|. .|.+|++++|+.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 48999999999999999999 999999999875
No 484
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=93.85 E-value=0.034 Score=47.19 Aligned_cols=31 Identities=23% Similarity=0.380 Sum_probs=29.3
Q ss_pred CcEEEECCcHHHHHHHHHHhhC-----C-CCeEEEec
Q 022090 8 VEVIMVGAGTSGLATAACLSLQ-----S-IPYVILER 38 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~-----g-~~v~iie~ 38 (303)
.+|.|||+|..|...|..|.+. | ++|+++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 5899999999999999999999 9 99999987
No 485
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=93.83 E-value=0.042 Score=49.73 Aligned_cols=33 Identities=27% Similarity=0.430 Sum_probs=30.4
Q ss_pred CcEEEECCcHHHHHHHHHHhhC--CCCeEEEecCC
Q 022090 8 VEVIMVGAGTSGLATAACLSLQ--SIPYVILEREN 40 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~--g~~v~iie~~~ 40 (303)
.+|.|||.|..|+..|..|++. |++|+++|++.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 5899999999999999999998 78999999864
No 486
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=93.83 E-value=0.035 Score=50.30 Aligned_cols=33 Identities=30% Similarity=0.416 Sum_probs=31.1
Q ss_pred CeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
.+|+|||+|.+|+-+|..|++.|.+|+++++++
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~ 72 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARD 72 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 589999999999999999999999999998875
No 487
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=93.83 E-value=0.065 Score=46.86 Aligned_cols=35 Identities=23% Similarity=0.359 Sum_probs=31.8
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
...+|+|||+|..|..+|..|+..|.+|+++|++.
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 35789999999999999999999999999999864
No 488
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.82 E-value=0.048 Score=42.23 Aligned_cols=36 Identities=19% Similarity=0.194 Sum_probs=32.6
Q ss_pred CCCCeEEEECCCccHHHHHHHHhhc-cCceEEEeecC
Q 022090 184 YGGKNVLVVGSGNSGMEIALDLANH-AAKTSLVVRSP 219 (303)
Q Consensus 184 ~~~~~v~ViG~G~~g~e~a~~l~~~-g~~vt~~~r~~ 219 (303)
..+++++|+|.|.+|..+|..|.+. |.+|+++.+++
T Consensus 37 ~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 37 PGHAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp CTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 3467899999999999999999999 99999998876
No 489
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=93.80 E-value=0.05 Score=46.39 Aligned_cols=33 Identities=12% Similarity=0.173 Sum_probs=31.2
Q ss_pred CcEEEECCcHHHHHHHHHHhhCC-CCeEEEecCC
Q 022090 8 VEVIMVGAGTSGLATAACLSLQS-IPYVILEREN 40 (303)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~g-~~v~iie~~~ 40 (303)
.+|.|||.|..|...|..|++.| ++|++++++.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 57999999999999999999999 9999999875
No 490
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=93.80 E-value=0.059 Score=46.07 Aligned_cols=34 Identities=29% Similarity=0.378 Sum_probs=30.5
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCC--CeEEEecCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSI--PYVILEREN 40 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~--~v~iie~~~ 40 (303)
..+|+|||+|..|.++|..|+..|. +++++|.+.
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 4689999999999999999999987 899998754
No 491
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=93.80 E-value=0.077 Score=44.75 Aligned_cols=33 Identities=33% Similarity=0.506 Sum_probs=30.9
Q ss_pred CcEEEEC-CcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 8 VEVIMVG-AGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 8 ~~vvIIG-aG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
.+|.||| +|..|.+.|..|.+.|++|++++++.
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 4899999 99999999999999999999999865
No 492
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=93.79 E-value=0.067 Score=44.45 Aligned_cols=34 Identities=21% Similarity=0.317 Sum_probs=31.0
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
.+.++|+|+|-+|.++|..|.+.|.+|++++|+.
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 4689999999999999999999999999998764
No 493
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=93.79 E-value=0.066 Score=42.48 Aligned_cols=32 Identities=25% Similarity=0.314 Sum_probs=29.9
Q ss_pred cEEEEC-CcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 9 EVIMVG-AGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 9 ~vvIIG-aG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
+|+||| +|..|...|..|.+.|++|++++++.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 699999 99999999999999999999999864
No 494
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=93.79 E-value=0.039 Score=50.33 Aligned_cols=33 Identities=24% Similarity=0.450 Sum_probs=31.1
Q ss_pred CeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 187 ~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
-.|+|||+|..|+-+|..+++.|.+|+++++.+
T Consensus 42 ~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~ 74 (510)
T 4at0_A 42 ADVVVAGYGIAGVAASIEAARAGADVLVLERTS 74 (510)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 479999999999999999999999999999876
No 495
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=93.72 E-value=0.048 Score=43.43 Aligned_cols=38 Identities=16% Similarity=0.280 Sum_probs=31.1
Q ss_pred CCCCCCeEEEECCCccHHHHHHHHhhccCceEEEeecC
Q 022090 182 KPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (303)
Q Consensus 182 ~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~vt~~~r~~ 219 (303)
......+|.|||.|..|.-+|..|++.|.+|+++.|++
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~ 52 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKD 52 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 44557899999999999999999999999999998875
No 496
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=93.69 E-value=0.089 Score=46.12 Aligned_cols=36 Identities=17% Similarity=0.253 Sum_probs=32.4
Q ss_pred CCCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCCC
Q 022090 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (303)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~~ 41 (303)
..++|+|||+|..|..++..+.+.|++|+++|.++.
T Consensus 13 ~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKN 48 (389)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 356899999999999999999999999999997653
No 497
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=93.65 E-value=0.053 Score=47.91 Aligned_cols=31 Identities=26% Similarity=0.372 Sum_probs=29.1
Q ss_pred cEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 9 EVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 9 ~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
+|.|||+|..|+..|..|++ |++|+++|++.
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 69999999999999999999 99999999864
No 498
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=93.65 E-value=0.078 Score=47.90 Aligned_cols=34 Identities=9% Similarity=0.178 Sum_probs=31.9
Q ss_pred CCcEEEECCcHHHHHHHHHHhhCCCCeEEEecCC
Q 022090 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (303)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~g~~v~iie~~~ 40 (303)
+.+|.|||.|..|...|..|.+.|++|++++++.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4589999999999999999999999999999876
No 499
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=93.63 E-value=0.051 Score=46.45 Aligned_cols=30 Identities=27% Similarity=0.199 Sum_probs=29.0
Q ss_pred cEEEECCcHHHHHHHHHHhhCCCCeEEEec
Q 022090 9 EVIMVGAGTSGLATAACLSLQSIPYVILER 38 (303)
Q Consensus 9 ~vvIIGaG~aGl~~A~~l~~~g~~v~iie~ 38 (303)
+|.|||+|..|...|..|.+.|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 699999999999999999999999999998
No 500
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=93.61 E-value=0.069 Score=45.36 Aligned_cols=32 Identities=28% Similarity=0.436 Sum_probs=29.2
Q ss_pred cEEEECCcHHHHHHHHHHhhC--CCCeEEEecCC
Q 022090 9 EVIMVGAGTSGLATAACLSLQ--SIPYVILEREN 40 (303)
Q Consensus 9 ~vvIIGaG~aGl~~A~~l~~~--g~~v~iie~~~ 40 (303)
+|+|||+|..|.++|..|+.. |.+|+++|++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 799999999999999999985 78999999875
Done!