BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022092
(302 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SF32|IQD1_ARATH Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana GN=IQD1 PE=1 SV=1
Length = 454
Score = 111 bits (277), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 117/205 (57%), Gaps = 20/205 (9%)
Query: 59 EDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEI 118
E+ AAI IQ+ FR + AR+ + ++G RL+ + + VQ+QA TL + T S++Q++I
Sbjct: 107 EEAAAILIQSTFRGHLARRESQVMRGQERLKLLMEGSVVQRQAAITLKCMQTLSRVQSQI 166
Query: 119 RARRLCMVKEGRLRQKKLENQLKLDAK-LNSLEI--DWSGGPETMEEILSRINQREKAAV 175
R+RR+ M +E + R K+L L+ AK L L+ +W+ ++ E++ + + + +A +
Sbjct: 167 RSRRIRMSEENQARHKQL---LQKHAKELGGLKNGGNWNYSNQSKEQVEAGMLHKYEATM 223
Query: 176 KRERAMAYAFSHQ-----WRANPNPLGKYELGKADWGWSWKERWIAARPWE--------I 222
+RERA+AYAF+HQ + NP+ + WGWSW ERW+A RPWE
Sbjct: 224 RRERALAYAFTHQQNLKSFSKTANPMF-MDPSNPTWGWSWLERWMAGRPWESSEKEQNTT 282
Query: 223 RVPSPSISQKKVQRTQAGKSGKDSN 247
+ S+ + +Q G++ K SN
Sbjct: 283 NNDNSSVKNSTNRNSQGGETAKSSN 307
>sp|Q8LPG9|IQD14_ARATH Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana GN=IQD14 PE=1 SV=1
Length = 668
Score = 94.7 bits (234), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 100/185 (54%), Gaps = 24/185 (12%)
Query: 56 MPVEDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQ 115
+PV+ +A +IQ AFR Y ARK+FR LKG +RLQGV + +SV++Q + Y+ ++Q
Sbjct: 318 LPVQHASATKIQGAFRGYMARKSFRALKGLVRLQGVVRGYSVKRQTINAMKYMQQVVRVQ 377
Query: 116 AEIRARRLCMVKEGRLRQKKLENQLKLD------AKLNSLEIDWSGGPETMEEILSRINQ 169
++I++RR+ M LENQ +++ A + +W T EE SR +
Sbjct: 378 SQIQSRRIKM----------LENQAQVEKDEAKWAASEAGNDNWDDSVLTKEERDSRSQR 427
Query: 170 REKAAVKRERAMAYAFSHQ-WRANPNPLGKYELGKADWGWSWKERWIAARPWEIRVPSPS 228
+ A +KRER+MAYA+S + W+ +P W W ++ +A+ P+PS
Sbjct: 428 KTDAIIKRERSMAYAYSRKLWKNSPKSTQDNRSFPQWWNWVDRQNPLAS-------PAPS 480
Query: 229 ISQKK 233
SQ +
Sbjct: 481 YSQPQ 485
>sp|Q8L4D8|IQD31_ARATH Protein IQ-DOMAIN 31 OS=Arabidopsis thaliana GN=IQD31 PE=1 SV=1
Length = 587
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 101/228 (44%), Gaps = 32/228 (14%)
Query: 60 DVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIR 119
++AA +Q AFR Y AR+ F LKG IRLQ + + H V++QA TL + +LQA R
Sbjct: 113 EIAATSVQAAFRGYLARRAFWALKGIIRLQALIRGHLVRRQAVATLFSVMGIVRLQAFAR 172
Query: 120 ARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKAAVKRER 179
R +R+ + Q+ +L L+ + P A + ++
Sbjct: 173 GR--------EIRKSDIGVQVYRKCRLQLLQGNKLANP-------------TDAYLGIKK 211
Query: 180 AMAYAFSHQWRA-NPN--PLGKYELGKADWGWSWKERWIAARPWEIRVPSPSISQKKVQR 236
A AF+ + A +P P+ Y+ + W E W A+ W+ VP P +K + R
Sbjct: 212 LTANAFAQKLLASSPKVLPVHAYDTSNPNSNLIWLENWSASCFWK-PVPQP---KKTISR 267
Query: 237 TQAGKSGKDSNSPTPKSSVSVKPSISNGKGTSKARRLSFPDAEKPSSS 284
+ ++ S PK SV P+ SN + +S F EKP S
Sbjct: 268 KPQNRLLVEAESAKPKKSVRKVPA-SNFESSSVQTSFEF---EKPKRS 311
>sp|Q9FXI5|IQD32_ARATH Protein IQ-DOMAIN 32 OS=Arabidopsis thaliana GN=IQD32 PE=1 SV=3
Length = 794
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 58 VEDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAE 117
+++ + IQ A R + AR+ R K I+LQ + H V+ QA +L + K+QA
Sbjct: 213 LDESVIVVIQAAVRGFLARRELLRSKKVIKLQAAVRGHLVRSQAMGSLRCVQAIVKMQAM 272
Query: 118 IRARR 122
+RAR
Sbjct: 273 VRARH 277
>sp|P62297|ASPM_SHEEP Abnormal spindle-like microcephaly-associated protein homolog
(Fragment) OS=Ovis aries GN=ASPM PE=2 SV=1
Length = 3374
Score = 35.8 bits (81), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 62 AAIRIQTAFRAYKARKTFRRL-KGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQA-EIR 119
A ++IQ+ +RAY +R+ F RL K T++LQ + + +KQ YLH + Q E
Sbjct: 1593 AVVKIQSYYRAYASRRKFLRLKKATVKLQSIVRMKQARKQ------YLHLRAIAQQREEH 1646
Query: 120 ARRLCMVKEGRLRQKKLENQLKLDAK 145
R C+ + LR + Q++L K
Sbjct: 1647 LRASCIKLQAFLRGYLVRKQVRLQRK 1672
>sp|Q5VST9|OBSCN_HUMAN Obscurin OS=Homo sapiens GN=OBSCN PE=1 SV=3
Length = 7968
Score = 35.4 bits (80), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 38 KKPLGKESSIFAIGSTLGMPVEDVAAIRIQTAFRAYKARKTFRRLKGTI 86
+ PLG S+ LG P D AA++IQ AF+ YK RK ++ +G +
Sbjct: 4856 RPPLGDLST-----KDLGDPSMDKAAVKIQAAFKGYKVRKEMKQQEGPM 4899
>sp|P62288|ASPM_FELCA Abnormal spindle-like microcephaly-associated protein homolog
(Fragment) OS=Felis catus GN=ASPM PE=2 SV=1
Length = 3461
Score = 34.7 bits (78), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 7/47 (14%)
Query: 64 IRIQTAFRAYKARKTFRRLK-GTIRLQGVSQRHSVQKQATTTLSYLH 109
I+IQ+ +RAY +RK F RLK T++LQ + + +KQ YLH
Sbjct: 1661 IKIQSYYRAYISRKKFLRLKHATVKLQSIVKMKQTRKQ------YLH 1701
Score = 32.0 bits (71), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Query: 59 EDVAAIRIQTAFRAYKARKTFRR-LKGTIRLQ 89
+ +AA++IQTAFR Y RK ++ L+ TI++Q
Sbjct: 1825 QSIAALKIQTAFRGYSKRKKYQYVLQSTIKIQ 1856
>sp|P62285|ASPM_BOVIN Abnormal spindle-like microcephaly-associated protein homolog
(Fragment) OS=Bos taurus GN=ASPM PE=2 SV=1
Length = 3371
Score = 34.3 bits (77), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Query: 64 IRIQTAFRAYKARKTFRRL-KGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIRARR 122
++IQ+ +RAY +R+ F RL K T++LQ + + +KQ YLH + Q RR
Sbjct: 1592 VKIQSYYRAYASRRKFLRLKKATVKLQSIVRMKLARKQ------YLHLRAIAQQREEHRR 1645
Query: 123 L-CMVKEGRLRQKKLENQLKLDAK 145
C+ + LR + Q++L K
Sbjct: 1646 ASCIKLQAFLRGYLVRKQVRLQRK 1669
Score = 31.6 bits (70), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 56 MPVEDVAAIRIQTAFRAYKARKTFRRLK-GTIRLQGVSQRH 95
M V A I IQ+ FR +KAR+ +R+ R+Q +RH
Sbjct: 2577 MAVRTQAVICIQSCFRGFKARRGIQRMHLAATRIQSCYRRH 2617
>sp|O89019|INVS_MOUSE Inversin OS=Mus musculus GN=Invs PE=1 SV=2
Length = 1062
Score = 34.3 bits (77), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 58 VEDVAAIRIQTAFRAYKARKTFRRLKGTI 86
++D+AA +IQ ++ YK RK FR K +
Sbjct: 554 IQDIAAFKIQAVYKGYKVRKAFRDRKNLL 582
>sp|Q6JAN1|INVS_CANFA Inversin OS=Canis familiaris GN=INVS PE=1 SV=1
Length = 1081
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 58 VEDVAAIRIQTAFRAYKARKTFRRLKGTI 86
++D+AA +IQ ++ YK RK FR K +
Sbjct: 554 IQDIAAFKIQAVYKGYKVRKAFRDRKNLL 582
>sp|Q9Y283|INVS_HUMAN Inversin OS=Homo sapiens GN=INVS PE=1 SV=2
Length = 1065
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 58 VEDVAAIRIQTAFRAYKARKTFRRLKGTI 86
++D+AA +IQ ++ YK RK FR K +
Sbjct: 554 IQDIAAFKIQAVYKGYKVRKAFRDRKNLL 582
>sp|Q8CJ27|ASPM_MOUSE Abnormal spindle-like microcephaly-associated protein homolog OS=Mus
musculus GN=Aspm PE=2 SV=2
Length = 3122
Score = 34.3 bits (77), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 12/96 (12%)
Query: 62 AAIRIQTAFRAYKARKTFRRLK-GTIRLQGVSQRHSVQKQATTTLS---YLHTWSKLQ-- 115
+ I+IQ+ +RAY RKTF+ K TI+LQ + + +KQ + ++ W + Q
Sbjct: 1626 SVIKIQSYYRAYICRKTFQNFKNATIKLQSIVKMKQSRKQYLQIRAAALFIQRWYRSQKL 1685
Query: 116 ------AEIRARRLCMVKEGRLRQKKLENQLKLDAK 145
I+ R C+ + R + QL+L K
Sbjct: 1686 ASQKRKEYIQVRESCIKLQSHFRGCLVRKQLRLQCK 1721
>sp|Q3MG79|RSGA_ANAVT Putative ribosome biogenesis GTPase RsgA OS=Anabaena variabilis
(strain ATCC 29413 / PCC 7937) GN=rsgA PE=3 SV=1
Length = 370
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 130 RLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKAAVKRERAMAYAFSHQW 189
R R KK+ Q+ + ++ E DW+GG + E+LSR Q ++ + + F+
Sbjct: 60 RTRLKKIGQQVMVGDRVVVEEPDWAGGRGAIAEVLSRQTQLDRPPIANADQILLVFA--- 116
Query: 190 RANPNPLGKYELGK 203
A+P PL Y+L +
Sbjct: 117 VADP-PLEPYQLSR 129
>sp|P62286|ASPM_CANFA Abnormal spindle-like microcephaly-associated protein homolog
OS=Canis familiaris GN=ASPM PE=2 SV=2
Length = 3469
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 7/47 (14%)
Query: 64 IRIQTAFRAYKARKTFRRLK-GTIRLQGVSQRHSVQKQATTTLSYLH 109
I+IQ+ +RAY +RK F RLK T++LQ + + +K+ YLH
Sbjct: 1652 IKIQSCYRAYISRKRFLRLKNATVKLQSIVKMRQTRKR------YLH 1692
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 25/32 (78%), Gaps = 1/32 (3%)
Query: 59 EDVAAIRIQTAFRAYKARKTFRR-LKGTIRLQ 89
+ +AA++IQTAFR Y+ RK ++ L+ TI++Q
Sbjct: 1816 QSIAALKIQTAFRGYRERKKYQYVLQSTIKIQ 1847
>sp|P21271|MYO5B_MOUSE Unconventional myosin-Vb OS=Mus musculus GN=Myo5b PE=2 SV=2
Length = 1818
Score = 33.1 bits (74), Expect = 2.3, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 62 AAIRIQTAFRAYKARKTFRRL-KGTIRLQGVSQRHSVQK---------QATTTLSYLHTW 111
AAI Q +R KAR+ +RR+ + T+ +Q ++ V++ +AT Y W
Sbjct: 816 AAIVFQKQYRMLKARRAYRRVCRATVIIQSFTRAMFVRRNYRQVLMEHKATIIQKYARGW 875
Query: 112 SKLQAEIRARRLCMVKEGRLRQKKLENQLK 141
+ +R R +V + R+ K +LK
Sbjct: 876 MARKRFLRERDAAIVIQCAFRRLKARQELK 905
>sp|Q9UQD0|SCN8A_HUMAN Sodium channel protein type 8 subunit alpha OS=Homo sapiens GN=SCN8A
PE=1 SV=1
Length = 1980
Score = 32.7 bits (73), Expect = 3.0, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 50 IGSTLGMPVEDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLH 109
I +TL E+V+A+ +Q A+R + AR+ F K T H +K++T + + L
Sbjct: 1886 ITTTLRRKQEEVSAVVLQRAYRGHLARRGFICKKTTSNKLENGGTHREKKESTPSTASLP 1945
Query: 110 TW---SKLQAEIRARRLCMVKEGRLRQKKLENQLK 141
++ +K + E + R +EGR + K + +++
Sbjct: 1946 SYDSVTKPEKEKQQR----AEEGRRERAKRQKEVR 1976
>sp|Q8YUA3|RSGA1_NOSS1 Putative ribosome biogenesis GTPase RsgA 1 OS=Nostoc sp. (strain
PCC 7120 / UTEX 2576) GN=rsgA1 PE=3 SV=1
Length = 370
Score = 32.7 bits (73), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 130 RLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKAAVKRERAMAYAFSHQW 189
R R KK+ Q+ + ++ E DW+GG + ++LSR Q ++ + + F+
Sbjct: 60 RTRLKKIGQQVMVGDRVVVEEPDWAGGRGAIADVLSRQTQLDRPPIANADQILLVFA--- 116
Query: 190 RANPNPLGKYELGK 203
A+P PL Y+L +
Sbjct: 117 VADP-PLEPYQLSR 129
>sp|Q8UVC3|INVS_CHICK Inversin OS=Gallus gallus GN=INVS PE=2 SV=2
Length = 1106
Score = 32.7 bits (73), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 58 VEDVAAIRIQTAFRAYKARKTFRRLKGTI 86
++D+AA +IQ ++ YK RK F+ K +
Sbjct: 554 IQDIAAFKIQAVYKGYKVRKAFQERKNLL 582
>sp|Q8XJL3|FMT_CLOPE Methionyl-tRNA formyltransferase OS=Clostridium perfringens (strain
13 / Type A) GN=fmt PE=3 SV=1
Length = 309
Score = 32.7 bits (73), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Query: 195 PLGKYELGKADWGWSWKERWIAAR---PWEIRVPSPSISQKKVQRTQAGKSGKDSNSPTP 251
P+ E+ K DW S ++ R PW + + S KV +T+ K DSN P
Sbjct: 202 PMLNKEIAKIDWSLSAQDIHNLVRGLNPWPVALTSYDDITMKVHQTRVEKG--DSNK-EP 258
Query: 252 KSSVSVKPS---ISNGKGTSKARRLSFPDAEK 280
+ +SV + +S GK +L FP++++
Sbjct: 259 GTIISVDKTGIKVSTGKDILVIEKLQFPNSKQ 290
>sp|P76481|YFBK_ECOLI Uncharacterized protein YfbK OS=Escherichia coli (strain K12)
GN=yfbK PE=4 SV=1
Length = 575
Score = 32.0 bits (71), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 10/60 (16%)
Query: 35 FKWKKPLGKESSI--FAIGSTLGMPVEDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVS 92
+WK P GKES + F +G T+ P ED +R + A AY ++L+G+ L S
Sbjct: 486 IRWKYPQGKESQLVEFPLGPTINAPSED---MRFRAAVAAYG-----QKLRGSEYLNNTS 537
>sp|Q9WTU3|SCN8A_MOUSE Sodium channel protein type 8 subunit alpha OS=Mus musculus GN=Scn8a
PE=1 SV=1
Length = 1978
Score = 32.0 bits (71), Expect = 5.7, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 50 IGSTLGMPVEDVAAIRIQTAFRAYKARKTF--RRLKGTIRLQGVSQRHSVQKQATTTLSY 107
I +TL E+V+A+ +Q A+R + AR+ F R++ G + R +K++T + +
Sbjct: 1884 ITTTLRRKQEEVSAVVLQRAYRGHLARRGFICRKITSNKLENGGTHRE--KKESTPSTAS 1941
Query: 108 LHTWSKLQAEIRARRLCMVKEGRLRQKKLENQLK 141
L ++ + + ++ +EGR + K + +++
Sbjct: 1942 LPSYDSVTKPDKEKQQ-RAEEGRRERAKRQKEVR 1974
>sp|A2AAJ9|OBSCN_MOUSE Obscurin OS=Mus musculus GN=Obscn PE=2 SV=2
Length = 8891
Score = 32.0 bits (71), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 57 PVEDVAAIRIQTAFRAYKARKTFRRLKGTI 86
P D AA++IQ AF+ YK RK ++ +G +
Sbjct: 5810 PSLDKAAVKIQAAFKGYKVRKEMKQQEGPV 5839
>sp|Q63358|MYO9B_RAT Unconventional myosin-IXb OS=Rattus norvegicus GN=Myo9b PE=1 SV=1
Length = 1980
Score = 32.0 bits (71), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 9/63 (14%)
Query: 62 AAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIRAR 121
AA+ IQ +R+Y+ R+T R + + LQ + R +Q+QA Y H + IR +
Sbjct: 983 AALTIQACWRSYRVRRTLERTRAAVYLQA-AWRGYLQRQA-----YHHQRHSI---IRLQ 1033
Query: 122 RLC 124
LC
Sbjct: 1034 SLC 1036
>sp|Q2XVR4|SC4AB_TETNG Sodium channel protein type 4 subunit alpha B OS=Tetraodon
nigroviridis GN=scn4ab PE=3 SV=1
Length = 1715
Score = 31.6 bits (70), Expect = 6.9, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 8/138 (5%)
Query: 17 VGSSKQVKGSSASAKSKGFKWKKPLGKESSIFAIGSTLGMPVEDVAAIRIQTAFRAYKAR 76
+G S ++ A+ + K F P + S I STL E+VAA IQ A+R Y +
Sbjct: 1572 LGDSDEMDTLKATMEEK-FMANNP--SKVSYEPISSTLRRKEEEVAARVIQRAYRKYLLQ 1628
Query: 77 KTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIR-ARRLCMVKEGRLRQKK 135
+T R T R + ++ +K T +++L R M K L Q +
Sbjct: 1629 RTVRLASFTYREK--TEGWGTKKAPETEGLLCKQFNQLFGNKRETEEPLMSKNDELGQVE 1686
Query: 136 LENQLKLDAK--LNSLEI 151
L++++ L A LN+LE+
Sbjct: 1687 LQSEVLLHAAPPLNTLEL 1704
>sp|P62296|ASPM_SAIBB Abnormal spindle-like microcephaly-associated protein homolog
OS=Saimiri boliviensis boliviensis GN=ASPM PE=2 SV=1
Length = 3469
Score = 31.6 bits (70), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 7/49 (14%)
Query: 62 AAIRIQTAFRAYKARKTFRRLK-GTIRLQGVSQRHSVQKQATTTLSYLH 109
+ I+IQ+ +RAY ++K F LK TI+LQ + + +KQ YLH
Sbjct: 1649 SVIKIQSYYRAYVSKKEFLSLKNATIKLQSIVRMKQTRKQ------YLH 1691
>sp|P62290|ASPM_HYLLA Abnormal spindle-like microcephaly-associated protein homolog
OS=Hylobates lar GN=ASPM PE=3 SV=1
Length = 3477
Score = 31.6 bits (70), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 7/49 (14%)
Query: 62 AAIRIQTAFRAYKARKTFRRLK-GTIRLQGVSQRHSVQKQATTTLSYLH 109
+ I+IQ+ +RAY ++K F LK TI+LQ S+ K T YLH
Sbjct: 1658 SVIKIQSYYRAYVSKKEFLSLKNATIKLQ------SIVKMKQTRXQYLH 1700
>sp|P62287|ASPM_COLGU Abnormal spindle-like microcephaly-associated protein homolog
OS=Colobus guereza GN=ASPM PE=3 SV=1
Length = 3477
Score = 31.6 bits (70), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 7/49 (14%)
Query: 62 AAIRIQTAFRAYKARKTFRRLK-GTIRLQGVSQRHSVQKQATTTLSYLH 109
+ I+IQ+ +RAY ++K F LK TI+LQ + + +KQ YLH
Sbjct: 1658 SVIKIQSYYRAYVSKKEFLSLKNATIKLQSIVKMKQTRKQ------YLH 1700
>sp|P62291|ASPM_MACFA Abnormal spindle-like microcephaly-associated protein homolog
OS=Macaca fascicularis GN=ASPM PE=2 SV=1
Length = 3476
Score = 31.6 bits (70), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 7/49 (14%)
Query: 62 AAIRIQTAFRAYKARKTFRRLKG-TIRLQGVSQRHSVQKQATTTLSYLH 109
+ I+IQ+ +RAY ++K F LK TI+LQ + + +KQ YLH
Sbjct: 1658 SVIKIQSYYRAYVSKKEFLSLKNTTIKLQSIVKMKQTRKQ------YLH 1700
>sp|P62293|ASPM_PANTR Abnormal spindle-like microcephaly-associated protein homolog OS=Pan
troglodytes GN=ASPM PE=2 SV=1
Length = 3477
Score = 31.6 bits (70), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 7/49 (14%)
Query: 62 AAIRIQTAFRAYKARKTFRRLK-GTIRLQGVSQRHSVQKQATTTLSYLH 109
+ I+IQ+ +RAY ++K F LK TI+LQ + + +KQ YLH
Sbjct: 1658 SVIKIQSYYRAYVSKKEFLSLKNATIKLQSIVKMKQTRKQ------YLH 1700
>sp|P62292|ASPM_MACMU Abnormal spindle-like microcephaly-associated protein homolog
OS=Macaca mulatta GN=ASPM PE=3 SV=1
Length = 3479
Score = 31.6 bits (70), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 7/49 (14%)
Query: 62 AAIRIQTAFRAYKARKTFRRLKG-TIRLQGVSQRHSVQKQATTTLSYLH 109
+ I+IQ+ +RAY ++K F LK TI+LQ + + +KQ YLH
Sbjct: 1658 SVIKIQSYYRAYVSKKEFLSLKNTTIKLQSIVKMKQTRKQ------YLH 1700
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.125 0.364
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 108,845,747
Number of Sequences: 539616
Number of extensions: 4400917
Number of successful extensions: 14021
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 94
Number of HSP's that attempted gapping in prelim test: 13587
Number of HSP's gapped (non-prelim): 561
length of query: 302
length of database: 191,569,459
effective HSP length: 117
effective length of query: 185
effective length of database: 128,434,387
effective search space: 23760361595
effective search space used: 23760361595
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)