Query 022093
Match_columns 302
No_of_seqs 215 out of 961
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 13:54:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022093.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022093hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pfy_A OTU domain-containing p 100.0 5.2E-35 1.8E-39 258.6 5.8 129 162-301 35-181 (185)
2 3by4_A OTU1, ubiquitin thioest 100.0 2.5E-30 8.6E-35 232.9 9.2 106 182-301 16-139 (212)
3 3phx_A RNA-directed RNA polyme 99.9 1.7E-27 5.8E-32 210.5 9.3 105 186-302 31-160 (185)
4 3phu_A RNA-directed RNA polyme 99.9 2E-27 6.9E-32 215.0 8.7 105 186-302 31-160 (219)
5 1tff_A Ubiquitin thiolesterase 99.8 1.4E-21 4.8E-26 178.3 8.2 78 215-302 150-231 (234)
6 2zfy_A Ubiquitin thioesterase 99.8 9.3E-21 3.2E-25 172.7 8.7 77 215-301 153-234 (234)
7 4dhi_B Ubiquitin thioesterase 99.7 5.9E-18 2E-22 158.0 7.0 81 215-302 188-274 (284)
8 4ddg_A Ubiquitin-conjugating e 99.7 2.7E-17 9.4E-22 160.1 7.9 77 215-301 318-399 (399)
9 3dkb_A Tumor necrosis factor, 98.3 4.5E-06 1.5E-10 79.9 10.8 112 184-301 110-282 (390)
10 3zrh_A Ubiquitin thioesterase 98.1 5.6E-06 1.9E-10 80.4 8.5 111 185-301 188-348 (454)
11 3lay_A Zinc resistance-associa 57.3 31 0.001 29.5 7.2 60 35-98 69-134 (175)
12 3i00_A HIP-I, huntingtin-inter 42.5 1.1E+02 0.0037 24.5 7.9 50 40-97 11-60 (120)
13 1jad_A PLC-beta, phospholipase 36.8 1.1E+02 0.0037 27.7 7.8 30 76-105 100-129 (251)
14 1l8d_A DNA double-strand break 36.2 77 0.0026 24.1 6.0 41 42-94 62-102 (112)
15 3twe_A Alpha4H; unknown functi 35.6 31 0.0011 20.2 2.6 17 50-66 7-23 (27)
16 3he5_B Synzip2; heterodimeric 35.5 98 0.0034 20.7 5.6 36 46-93 12-47 (52)
17 3mq7_A Bone marrow stromal ant 35.3 78 0.0027 25.5 5.8 19 46-64 66-84 (121)
18 4h22_A Leucine-rich repeat fli 33.4 72 0.0025 25.1 5.2 45 40-96 40-84 (103)
19 1mdc_A Insect fatty acid bindi 31.1 68 0.0023 25.7 5.0 34 220-259 13-46 (132)
20 2xu6_A MDV1 coiled coil; prote 30.1 82 0.0028 23.2 4.7 30 51-92 21-50 (72)
21 3azd_A Short alpha-tropomyosin 29.6 15 0.00051 23.6 0.6 29 53-93 6-34 (37)
22 1ci6_A Transcription factor AT 28.9 1.3E+02 0.0044 21.1 5.6 35 48-94 20-54 (63)
23 1jad_A PLC-beta, phospholipase 28.8 2.9E+02 0.0099 24.9 9.2 19 42-60 125-143 (251)
24 1gmj_A ATPase inhibitor; coile 27.5 68 0.0023 24.3 4.0 22 83-105 57-78 (84)
25 1ftp_A Muscle fatty acid bindi 26.3 1.2E+02 0.0043 24.1 5.8 37 220-262 14-50 (133)
26 3viq_B Mating-type switching p 25.0 76 0.0026 24.1 3.9 40 53-104 3-50 (85)
27 2eqb_B RAB guanine nucleotide 24.9 2.4E+02 0.0082 21.8 6.8 42 48-94 16-57 (97)
28 1lpj_A Retinol-binding protein 23.3 1E+02 0.0036 24.6 4.8 34 220-259 13-46 (133)
29 4a5u_A RNA replicase polyprote 23.1 2.7E+02 0.0093 23.4 7.4 89 190-300 58-155 (160)
30 3ppt_A Sodium-calcium exchange 23.1 1.3E+02 0.0046 24.0 5.4 34 220-259 13-46 (133)
31 1vyf_A SM14, 14 kDa fatty acid 23.0 1.1E+02 0.0038 24.5 4.9 34 220-259 15-48 (135)
32 1gmj_A ATPase inhibitor; coile 22.3 2.4E+02 0.0083 21.3 6.2 23 46-68 53-75 (84)
33 2rcq_A CRBP-II, retinol-bindin 21.7 1.3E+02 0.0043 24.4 5.0 34 220-259 17-50 (141)
34 1o8v_A Fatty acid binding prot 21.7 1.5E+02 0.0052 23.6 5.5 32 220-257 14-45 (134)
35 2dgc_A Protein (GCN4); basic d 21.3 1.3E+02 0.0046 21.1 4.4 14 81-94 48-61 (63)
36 3pzp_A DNA polymerase kappa; D 21.2 70 0.0024 31.5 4.0 72 135-206 32-108 (517)
37 1mvg_A Liver basic fatty acid 20.7 1.3E+02 0.0045 23.7 4.8 34 220-259 11-44 (125)
38 3hnw_A Uncharacterized protein 20.6 2.2E+02 0.0074 23.1 6.2 15 80-94 120-134 (138)
39 1p6p_A Fatty acid-binding prot 20.0 1.3E+02 0.0046 23.7 4.7 34 220-259 11-44 (125)
No 1
>3pfy_A OTU domain-containing protein 5; structural genomics, structural genomics consortium, SGC, PE C65 otubain, hydrolase; HET: MSE PG4; 1.70A {Homo sapiens} PDB: 3tmp_A* 3tmo_A*
Probab=100.00 E-value=5.2e-35 Score=258.59 Aligned_cols=129 Identities=25% Similarity=0.371 Sum_probs=92.7
Q ss_pred HHhccCCCchhHHHHHHHHhccCCceEeeeCCCCchHHHHHHHHHhcCCCCC----------------CcchhhhHhHHH
Q 022093 162 EQSNIVSDRTVEDEKLEKKLGPLGLTVNDIKPDGHCLYRAVEDQLAHLSGGE----------------ESAQSQVERFEN 225 (302)
Q Consensus 162 e~~~~~~~r~~E~~~l~~~L~~~gL~i~~Ip~DGnCLFrAIadQL~~~~~~~----------------~fd~~~~~~fee 225 (302)
++...+..+..|..-++..|+.+||.+++||+|||||||||++||++.+..+ .|.+|++++|++
T Consensus 35 ~~~~~~~~~~~e~~~~~~l~~~~gL~~~~I~~DGnCLFrAia~qL~g~~~~h~~LR~~vv~yi~~n~d~f~~Fv~~~~e~ 114 (185)
T 3pfy_A 35 EAMDPATVEQQEHWFEKALRDKKGFIIKQMKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTT 114 (185)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHCCEEECCCCSTTHHHHHHHHHHHSCGGGHHHHHHHHHHHHHHTHHHHTTCC------
T ss_pred HhccCCCHHHHHHHHHHHHHHHCCcEEEeeCCCCChHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 3444455688999888888899999999999999999999999999876543 188889999999
Q ss_pred HHHHhhcCCccCcHHHHHHHHHhhcccEEEEeCCCCceEe--cCCcCCCCCCCCCCeEEEEeccCCCCCCCccccccC
Q 022093 226 YCKEVESTAAWGGELELRALTHCLRKHIMIYSGSFPDVEM--GKEYSNGGSDSSGSSIILSYHRHAFGLGEHYNSVIP 301 (302)
Q Consensus 226 Y~~~m~~t~~WGG~lEL~ALS~~l~v~I~V~q~~~~~~~i--g~e~~~~~~~~~~~~I~L~Y~~h~ygLGeHYnSl~p 301 (302)
||++|+++++|||+|||+|||++|+++|.||+.+++++.+ |.+. ...++|+|+||+ |+|||||++
T Consensus 115 Y~~~m~~~~~WGg~iEL~AlS~~~~v~I~V~~~~~~~i~i~~g~~~------~~~~~I~L~Y~~-----~~HYnSv~~ 181 (185)
T 3pfy_A 115 YINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYSTEPINTFHGIHQ------NEDEPIRVSYHR-----NIHYNSVVN 181 (185)
T ss_dssp -----------CCHHHHHHHHHHHTSCEEEESSCSSCSEEECTTSC------CTTSCEEEEEET-----TTEEEEEEC
T ss_pred HHHHhhCCCccchHHHHHHHHHhhCCcEEEEECCCCCeEEecCccC------CCCCEEEEEECC-----CCCcccccC
Confidence 9999999999999999999999999999999988765543 3222 236899999998 699999985
No 2
>3by4_A OTU1, ubiquitin thioesterase OTU1; ubiquitin hydrolase, deubiquitinase, cell cycle, hydrolase; 1.55A {Saccharomyces cerevisiae} PDB: 3c0r_A
Probab=99.96 E-value=2.5e-30 Score=232.93 Aligned_cols=106 Identities=18% Similarity=0.338 Sum_probs=90.7
Q ss_pred ccCCceEeeeCCCCchHHHHHHHHHhcCCCCC----------------Ccch-hhhHhHHHHHHHhhcCCccCcHHHHHH
Q 022093 182 GPLGLTVNDIKPDGHCLYRAVEDQLAHLSGGE----------------ESAQ-SQVERFENYCKEVESTAAWGGELELRA 244 (302)
Q Consensus 182 ~~~gL~i~~Ip~DGnCLFrAIadQL~~~~~~~----------------~fd~-~~~~~feeY~~~m~~t~~WGG~lEL~A 244 (302)
...||.+++||+|||||||||++|| +.+..+ .|.+ +++.+|++||++|+++++|||+|||+|
T Consensus 16 ~~~~l~~~~i~~DGnCLFrAva~qL-~~~~~~~~lR~~vv~yi~~n~d~f~e~~~~~~~e~Y~~~m~~~~~WGg~iEL~A 94 (212)
T 3by4_A 16 GENVLSVHPVLDDNSCLFHAIAYGI-FKQDSVRDLREMVSKEVLNNPVKFNDAILDKPNKDYAQWILKMESWGGAIEIGI 94 (212)
T ss_dssp CCSEEEEECCCCSTTHHHHHHHHHH-HSSCCSHHHHHHHHHHHHHCTTTTCHHHHTSCHHHHHHHTTSTTSCCCHHHHHH
T ss_pred CCCCeEEEEeCCCCchHHHHHHHHh-CCchHHHHHHHHHHHHHHHCHHHHhhhhcCCCHHHHHHHhcCCCEEccHHHHHH
Confidence 4458999999999999999999999 655443 1754 457899999999999999999999999
Q ss_pred HHHhhcccEEEEeCCC-CceEecCCcCCCCCCCCCCeEEEEeccCCCCCCCccccccC
Q 022093 245 LTHCLRKHIMIYSGSF-PDVEMGKEYSNGGSDSSGSSIILSYHRHAFGLGEHYNSVIP 301 (302)
Q Consensus 245 LS~~l~v~I~V~q~~~-~~~~ig~e~~~~~~~~~~~~I~L~Y~~h~ygLGeHYnSl~p 301 (302)
||++|+++|.||++++ +.+.||+++ ..++|+|+|+ |+|||||++
T Consensus 95 ls~~~~~~I~V~~~~~~~~~~~~~~~-------~~~~I~L~Y~------g~HYdsl~~ 139 (212)
T 3by4_A 95 ISDALAVAIYVVDIDAVKIEKFNEDK-------FDNYILILFN------GIHYDSLTM 139 (212)
T ss_dssp HHHHHTCEEEEEETTTTEEEEESTTT-------CSEEEEEEEC------SSCEEEEEE
T ss_pred HHHHHCCCEEEEECCCCCeEEeCCCC-------CCCeEEEEEc------CCcceEEec
Confidence 9999999999999864 566788654 2679999997 799999985
No 3
>3phx_A RNA-directed RNA polymerase L; OTU domain, DE-ubiquitinase, DE-isgylase, hydrolase-protein complex; 1.60A {Crimean-congo hemorrhagic fever virus} PDB: 3phw_A 3pt2_A 3pse_A 3prp_A 3prm_A
Probab=99.94 E-value=1.7e-27 Score=210.46 Aligned_cols=105 Identities=19% Similarity=0.347 Sum_probs=84.2
Q ss_pred ceEeeeCCCCchHHHHHHHHHhcC-CCC-----CC--------------cchhhhHhHHHHHHHhhcCCccCcHHHHHHH
Q 022093 186 LTVNDIKPDGHCLYRAVEDQLAHL-SGG-----EE--------------SAQSQVERFENYCKEVESTAAWGGELELRAL 245 (302)
Q Consensus 186 L~i~~Ip~DGnCLFrAIadQL~~~-~~~-----~~--------------fd~~~~~~feeY~~~m~~t~~WGG~lEL~AL 245 (302)
+.+..||||||||||||++||+++ +.. +. -+-+++.+|++||++|+++++|||++||+||
T Consensus 31 ~~v~rv~gDGnCLFrAva~qL~~~~~~~~~~~~~~~LR~~~~~yi~~~~~~~~~~~~~~~Y~~~m~~~~~WGg~iEL~Al 110 (185)
T 3phx_A 31 FEIVRQPGDGNCFYHSIAELTMPNKTDHSYHYIKRLTESAARKYYQEEPEARLVGLSLEDYLKRMLSDNEWGSTLEASML 110 (185)
T ss_dssp EEEECCCSSTTHHHHHHHHHHSTTCCTTTHHHHHHHHHHHHHHHGGGCTTHHHHCCCHHHHHHHHTSTTCCCBHHHHHHH
T ss_pred eEEEccCCCCchHHHHHHHHHhCCCccchhhhHHHHHHHHHHHHHHhChHhhhcCCCHHHHHHHhhCCCccCcHHHHHHH
Confidence 778899999999999999999986 332 21 1112357899999999999999999999999
Q ss_pred HHhhcccEEEEeCCCCc-----eEecCCcCCCCCCCCCCeEEEEeccCCCCCCCccccccCC
Q 022093 246 THCLRKHIMIYSGSFPD-----VEMGKEYSNGGSDSSGSSIILSYHRHAFGLGEHYNSVIPI 302 (302)
Q Consensus 246 S~~l~v~I~V~q~~~~~-----~~ig~e~~~~~~~~~~~~I~L~Y~~h~ygLGeHYnSl~p~ 302 (302)
|++|+++|.||+++++. +.+|++. ..++|+|+|++ |+|||||+|+
T Consensus 111 s~~~~v~I~V~~~d~~~~~~~i~~f~~~~-------~~~~I~L~Y~g-----~~HYdsl~~~ 160 (185)
T 3phx_A 111 AKEMGITIIIWTVAASDEVEAGIKFGDGD-------VFTAVNLLHSG-----QTHFDALRIL 160 (185)
T ss_dssp HHHHCCCEEEEEC--CCBCCEEEEESSCC-------TTTSEEEEEET-----TTEEEEEEEC
T ss_pred HHHHCCcEEEEEecCCCCceEEEEcCCCC-------CCCEEEEEECC-----CcCchhceEC
Confidence 99999999999977654 3465442 26899999984 5999999874
No 4
>3phu_A RNA-directed RNA polymerase L; OTU domain, DE-ubiquitinase, DE-isgylase, hydrolase; 2.20A {Crimean-congo hemorrhagic fever VIRUSIBAR10200}
Probab=99.94 E-value=2e-27 Score=214.99 Aligned_cols=105 Identities=18% Similarity=0.321 Sum_probs=85.7
Q ss_pred ceEeeeCCCCchHHHHHHHHHhcCC-CC-----CC--------c------chhhhHhHHHHHHHhhcCCccCcHHHHHHH
Q 022093 186 LTVNDIKPDGHCLYRAVEDQLAHLS-GG-----EE--------S------AQSQVERFENYCKEVESTAAWGGELELRAL 245 (302)
Q Consensus 186 L~i~~Ip~DGnCLFrAIadQL~~~~-~~-----~~--------f------d~~~~~~feeY~~~m~~t~~WGG~lEL~AL 245 (302)
+.+..||||||||||||++||++.. .. +. | +-+++.+|++||++|+++++|||++||+||
T Consensus 31 ~~V~rvpgDGnCLFrAVs~qL~~~~~~~~~~~~h~~LR~~va~yi~~n~d~~~~~~~feeY~~~m~~~g~WGG~iEL~Al 110 (219)
T 3phu_A 31 FEIVRQPGDGNCFYHSIAELTMPNKTDHSYHYIKRLTESAARKYYQEEPEARLVGLSLEDYLKRMLSDNEWGSTLEASML 110 (219)
T ss_dssp EEEECCCCSSCHHHHHHHHHHCTTCCTTTHHHHHHHHHHHHHHHGGGCHHHHHHCCCHHHHHHHHHSTTCCCCHHHHHHH
T ss_pred eEEEccCCCCchHHHHHHHHHhCCCccchhhhHHHHHHHHHHHHHHhChhhhhcCCCHHHHHHHhcCCCccCCHHHHHHH
Confidence 7788999999999999999998863 22 21 1 112357899999999999999999999999
Q ss_pred HHhhcccEEEEeCCCC-----ceEecCCcCCCCCCCCCCeEEEEeccCCCCCCCccccccCC
Q 022093 246 THCLRKHIMIYSGSFP-----DVEMGKEYSNGGSDSSGSSIILSYHRHAFGLGEHYNSVIPI 302 (302)
Q Consensus 246 S~~l~v~I~V~q~~~~-----~~~ig~e~~~~~~~~~~~~I~L~Y~~h~ygLGeHYnSl~p~ 302 (302)
|++|+++|+||+.+++ .+.||++. ..++|+|+|++ |+|||||+|+
T Consensus 111 S~~~~v~I~V~~~d~~g~~~~i~~fge~~-------~~~~I~L~Y~g-----~~HYdSL~~~ 160 (219)
T 3phu_A 111 AKEMGITIIIWTVAASDEVEAGIKFGDGD-------VFTAVNLLHSG-----QTHFDALRIL 160 (219)
T ss_dssp HHHTTCCEEEEEESSSSBEEEEEEESSCC-------TTTSEEEEEET-----TTEEEEEEEC
T ss_pred HHHhCCCEEEEEecCCCCceeEEEecCCC-------CCCeEEEEECC-----CcCchhheEC
Confidence 9999999999998776 33566542 26899999984 5999999874
No 5
>1tff_A Ubiquitin thiolesterase protein OTUB2; hydrolase; 2.10A {Homo sapiens} SCOP: d.3.1.11
Probab=99.84 E-value=1.4e-21 Score=178.28 Aligned_cols=78 Identities=21% Similarity=0.301 Sum_probs=60.6
Q ss_pred cchhhhH--hHHHHHH-HhhcCCccCcHHHHHHHHHhhcccEEEEeCCCCceE-ecCCcCCCCCCCCCCeEEEEeccCCC
Q 022093 215 SAQSQVE--RFENYCK-EVESTAAWGGELELRALTHCLRKHIMIYSGSFPDVE-MGKEYSNGGSDSSGSSIILSYHRHAF 290 (302)
Q Consensus 215 fd~~~~~--~feeY~~-~m~~t~~WGG~lEL~ALS~~l~v~I~V~q~~~~~~~-ig~e~~~~~~~~~~~~I~L~Y~~h~y 290 (302)
|.+|+++ +|++||. .|+.+++|||||||+|||++|++||.|++.+++... ....|.. +..+.|+|+|++
T Consensus 150 f~pFi~~~~~~~~yC~~~ve~~~~~~~~iei~ALa~aL~v~I~V~~~d~~~~~~~~~~~~~----~~~~~I~LlY~p--- 222 (234)
T 1tff_A 150 FRHFIDEEMDIKDFCTHEVEPMATECDHIQITALSQALSIALQVEYVDEMDTALNHHVFPE----AATPSVYLLYKT--- 222 (234)
T ss_dssp HGGGSCTTSCHHHHHHHHTSSTTCCCCHHHHHHHHHHHTCCEEEEECC-------CCCCCC----CSSCSEEEEEET---
T ss_pred HhhhhcCCCCHHHHHHHHhhhhhcccccHHHHHHHHHhCCCEEEEEcCCCCCccccccCCC----CCCCeEEEEECC---
Confidence 6677654 8999999 799999999999999999999999999998876522 2234432 346789999994
Q ss_pred CCCCccccccCC
Q 022093 291 GLGEHYNSVIPI 302 (302)
Q Consensus 291 gLGeHYnSl~p~ 302 (302)
+|||+|+|.
T Consensus 223 ---gHYdily~~ 231 (234)
T 1tff_A 223 ---SHYNILYAA 231 (234)
T ss_dssp ---TEEEEEEEC
T ss_pred ---CCceecccC
Confidence 699999984
No 6
>2zfy_A Ubiquitin thioesterase OTUB1; otubain, structural genomics, structural genomics consortium, SGC, alternative splicing, hydrolase, immune response; 1.69A {Homo sapiens} PDB: 4ddg_B 4ddi_A
Probab=99.82 E-value=9.3e-21 Score=172.73 Aligned_cols=77 Identities=17% Similarity=0.235 Sum_probs=61.1
Q ss_pred cchhhhH--hHHHHHH-HhhcCCccCcHHHHHHHHHhhcccEEEEeCCCCce--EecCCcCCCCCCCCCCeEEEEeccCC
Q 022093 215 SAQSQVE--RFENYCK-EVESTAAWGGELELRALTHCLRKHIMIYSGSFPDV--EMGKEYSNGGSDSSGSSIILSYHRHA 289 (302)
Q Consensus 215 fd~~~~~--~feeY~~-~m~~t~~WGG~lEL~ALS~~l~v~I~V~q~~~~~~--~ig~e~~~~~~~~~~~~I~L~Y~~h~ 289 (302)
|.+|+++ +|++||. .|+.+++||||+||+|||++|++||.|++.+++.. ..+..|.. +..++|+|+|++
T Consensus 153 f~pFi~~~~~~e~yc~~~ve~~~~~~~~i~i~ALa~al~v~I~V~~~d~~~~~~v~~~~f~~----~~~p~I~LlY~p-- 226 (234)
T 2zfy_A 153 FEHFIEGGRTVKEFCQQEVEPMCKESDHIHIIALAQALSVSIQVEYMDRGEGGTTNPHIFPE----GSEPKVYLLYRP-- 226 (234)
T ss_dssp HGGGCCSSCCHHHHHHHHTSSTTCCCCHHHHHHHHHHHTCCEEEEECC-CCSSCCEEEEEST----TCCCSEEEEEET--
T ss_pred HhcccCCCCCHHHHHHHHhhhHhhcCCHHHHHHHHHHhCCCEEEEEcCCCCCCcccceeCCC----CCCCeEEEEECC--
Confidence 6667644 8999997 69999999999999999999999999999876531 12234432 246789999995
Q ss_pred CCCCCccccccC
Q 022093 290 FGLGEHYNSVIP 301 (302)
Q Consensus 290 ygLGeHYnSl~p 301 (302)
+|||+|+|
T Consensus 227 ----gHYdiLy~ 234 (234)
T 2zfy_A 227 ----GHYDILYK 234 (234)
T ss_dssp ----TEEEEEEC
T ss_pred ----CCcccCCC
Confidence 59999998
No 7
>4dhi_B Ubiquitin thioesterase otubain-like; ubiquitin E2 enzyme fold, ubiquitination, hydrolase-ligase C; 1.80A {Caenorhabditis elegans} PDB: 4dhj_A 4dhz_A
Probab=99.71 E-value=5.9e-18 Score=158.04 Aligned_cols=81 Identities=17% Similarity=0.198 Sum_probs=60.5
Q ss_pred cchhhh--HhHHHHHH-HhhcCCccCcHHHHHHHHHhhcccEEEEeCCCCc-eEec-CC-cCCCCCCCCCCeEEEEeccC
Q 022093 215 SAQSQV--ERFENYCK-EVESTAAWGGELELRALTHCLRKHIMIYSGSFPD-VEMG-KE-YSNGGSDSSGSSIILSYHRH 288 (302)
Q Consensus 215 fd~~~~--~~feeY~~-~m~~t~~WGG~lEL~ALS~~l~v~I~V~q~~~~~-~~ig-~e-~~~~~~~~~~~~I~L~Y~~h 288 (302)
|.+|+. .++++||. .|+.++.|||||+|+|||++|+++|.|+..++.. ..+. .. |.. +.....+.|+|.|..
T Consensus 188 f~pFi~~~~~v~~yC~~eVe~~~~e~d~leI~ALa~aL~v~I~V~ylDrs~g~~v~~h~~fp~-~~~~~~p~I~LLYrp- 265 (284)
T 4dhi_B 188 YAPFIDEGMTVAQYCEQEIEPMWKDADHLAINSLIKAAGTRVRIEYMDRTAAPNGGWHYDIPS-DDQQIAPEITLLYRP- 265 (284)
T ss_dssp HGGGSCTTCCHHHHHHHHTSSTTCCCCHHHHHHHHHHTTCCEEEEESSGGGCTTSSSEEEESC-CCSCCCCSEEEEEET-
T ss_pred HHhhcCCCCCHHHHHHHhceehhhcccHHHHHHHHHHhCCcEEEEEecCCCCCCCcccccCCC-CCCCCCCEEEEeecC-
Confidence 777774 48999999 7999999999999999999999999999876421 1111 11 311 111234789999994
Q ss_pred CCCCCCccccccCC
Q 022093 289 AFGLGEHYNSVIPI 302 (302)
Q Consensus 289 ~ygLGeHYnSl~p~ 302 (302)
.|||.|+|.
T Consensus 266 -----gHYDILY~~ 274 (284)
T 4dhi_B 266 -----GHYDVIYKK 274 (284)
T ss_dssp -----TEEEEEEEC
T ss_pred -----CCccccccC
Confidence 799999973
No 8
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=99.68 E-value=2.7e-17 Score=160.15 Aligned_cols=77 Identities=17% Similarity=0.247 Sum_probs=59.5
Q ss_pred cchhhhH--hHHHHHH-HhhcCCccCcHHHHHHHHHhhcccEEEEeCCCC-ceEec-CCcCCCCCCCCCCeEEEEeccCC
Q 022093 215 SAQSQVE--RFENYCK-EVESTAAWGGELELRALTHCLRKHIMIYSGSFP-DVEMG-KEYSNGGSDSSGSSIILSYHRHA 289 (302)
Q Consensus 215 fd~~~~~--~feeY~~-~m~~t~~WGG~lEL~ALS~~l~v~I~V~q~~~~-~~~ig-~e~~~~~~~~~~~~I~L~Y~~h~ 289 (302)
|.+|+++ ++++||. .|..+++|||||+|+|||++|+++|.|+..++. ...+. ..|. .+..+.|+|.|.+
T Consensus 318 f~pFi~~~~~v~~yc~~~ve~~~~e~d~l~I~ALa~al~v~I~V~yld~~~~~~v~~~~~~----~~~~~~I~LLYrP-- 391 (399)
T 4ddg_A 318 FEHFIEGGRTVKEFCQQEVEPMCKESDHIHIIALAQALSVSIQVEYMDRGEGGTTNPHIFP----EGSEPKVYLLYRP-- 391 (399)
T ss_dssp HGGGSSSSCCHHHHHHHHTSSTTCCBCHHHHHHHHHHHTCCCEEEECSCCSSSCCCEEETT----TTCCCCCEEEEET--
T ss_pred HhcccCCCCCHHHHHHHhceeHHhhCcHHHHHHHHHHcCCcEEEEEcCCCCCCccceeeCC----CCCCCEEEEEEcC--
Confidence 5566643 7999999 899999999999999999999999999876552 11111 1121 1347889999997
Q ss_pred CCCCCccccccC
Q 022093 290 FGLGEHYNSVIP 301 (302)
Q Consensus 290 ygLGeHYnSl~p 301 (302)
.|||.|+|
T Consensus 392 ----gHYDiLY~ 399 (399)
T 4ddg_A 392 ----GHYDILYK 399 (399)
T ss_dssp ----BEEEEEEC
T ss_pred ----CccccCCC
Confidence 59999987
No 9
>3dkb_A Tumor necrosis factor, alpha-induced protein 3; OTU domain, DUB domain, apoptosis, cytoplasm, DNA-binding, hydrolase, metal-binding, nucleus; 2.50A {Homo sapiens} PDB: 2vfj_A
Probab=98.25 E-value=4.5e-06 Score=79.89 Aligned_cols=112 Identities=19% Similarity=0.330 Sum_probs=71.3
Q ss_pred CCceEeeeCCCCchHHHHHHHHHhcCCCCCC----------------------------cchh-------h----hHhHH
Q 022093 184 LGLTVNDIKPDGHCLYRAVEDQLAHLSGGEE----------------------------SAQS-------Q----VERFE 224 (302)
Q Consensus 184 ~gL~i~~Ip~DGnCLFrAIadQL~~~~~~~~----------------------------fd~~-------~----~~~fe 224 (302)
.-|......||||||.+|++..+++-++... +.+| . ..+|+
T Consensus 110 ~rL~pL~t~GDGnCLLHAvSqamWGv~DrdlvLRkaL~~~L~~~~~~~fr~RW~~e~~~~q~~~~~gL~y~e~ew~~EW~ 189 (390)
T 3dkb_A 110 RKLVALKTNGDGNCLMHATSQYMWGVQDTDLVLRKALFSTLKETDTRNFKFRWQLESLKSQEFVETGLCYDTRNWNDEWD 189 (390)
T ss_dssp CCEEEBCCCCSSCHHHHHHHHHHHSSCSTTCHHHHHHHHHHHHSCCHHHHHHHHHHHHCCCSSCC----CCSSCSSHHHH
T ss_pred cceEEEEecCCCchHHHHHhHHhcCCCCHhHHHHHHHHHHHHhchHHHHHHHHHHHHHHhhhhHhhcccccHHHHHHHHH
Confidence 3577789999999999999999999776531 0011 1 23444
Q ss_pred HHHHHhhcCCc-------c--CcHHHHHHHHHhhcccEEEEeCC-------CC---ceEecCCcCC---CCCCCCCCeEE
Q 022093 225 NYCKEVESTAA-------W--GGELELRALTHCLRKHIMIYSGS-------FP---DVEMGKEYSN---GGSDSSGSSII 282 (302)
Q Consensus 225 eY~~~m~~t~~-------W--GG~lEL~ALS~~l~v~I~V~q~~-------~~---~~~ig~e~~~---~~~~~~~~~I~ 282 (302)
.-+...+.... + =-++-+-+||+++++||+||... |. ++.||.-|.. +.+.....||.
T Consensus 190 ~Iv~~Asp~~~~~~~~~~y~sLEeiHIFvLAhVLRRPIIV~~d~~lr~~~~Ge~~~Pi~f~GIYLPLlwpp~~C~rsPI~ 269 (390)
T 3dkb_A 190 NLIKMASTDTPMARSGLQYNSLEEIHIFVLCNILRRPIIVISDKMLRSLESGSNFAPLKVGGIYLPLHWPAQECYRYPIV 269 (390)
T ss_dssp HHHHHTSSCCCSSSSSCSSCCCCHHHHHHHHHHTTSCEEEEECCCCTTCCCC----CCCCCEEECCTTSCTTSSCSSCEE
T ss_pred HHHHHhCCCCCCCCCcchhhhHHHHHHHHHHHHhcCCEEEEechhhccccCCCccCcCccCceecCCcCCHHHccCCceE
Confidence 44433322111 1 12677999999999999999632 11 1223322321 12345678999
Q ss_pred EEeccCCCCCCCccccccC
Q 022093 283 LSYHRHAFGLGEHYNSVIP 301 (302)
Q Consensus 283 L~Y~~h~ygLGeHYnSl~p 301 (302)
|+|.+ .||.+|++
T Consensus 270 LgY~s------~HFsaLV~ 282 (390)
T 3dkb_A 270 LGYDS------HHFVPLVT 282 (390)
T ss_dssp EEECS------SCEEEEEE
T ss_pred EEecc------Cceeeeee
Confidence 99997 69999886
No 10
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=98.12 E-value=5.6e-06 Score=80.45 Aligned_cols=111 Identities=19% Similarity=0.213 Sum_probs=74.1
Q ss_pred CceEeeeCCCCchHHHHHHHHHhcCCCCCC-------------------------------c-chhh--h----HhHHHH
Q 022093 185 GLTVNDIKPDGHCLYRAVEDQLAHLSGGEE-------------------------------S-AQSQ--V----ERFENY 226 (302)
Q Consensus 185 gL~i~~Ip~DGnCLFrAIadQL~~~~~~~~-------------------------------f-d~~~--~----~~feeY 226 (302)
.|......||||||-+|++..+++-++... | -.|+ + .+|+.-
T Consensus 188 rL~pL~t~GDGNCLLHAvSqamWGV~DrdlvLRkaL~~~L~~~~~~f~~RW~~~e~~q~q~~gL~y~lde~ewq~EW~~i 267 (454)
T 3zrh_A 188 RLYALWNRTAGDCLLDSVLQATWGIYDKDSVLRKALHDSLHDCSHWFYTRWKDWESWYSQSFGLHFSLREEQWQEDWAFI 267 (454)
T ss_dssp CEEEBCCCCSSCHHHHHHHHTTTSSCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHHHHH
T ss_pred ceeEeeecCCCccHHHHHHHHhhcccCCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHH
Confidence 367788999999999999999999776421 1 0111 2 345554
Q ss_pred HHHhhcCCccCcHHHHHHHHHhhcccEEEEeCCC---------CceEecCCcCC---CCCCCCCCeEEEEeccCCCCCCC
Q 022093 227 CKEVESTAAWGGELELRALTHCLRKHIMIYSGSF---------PDVEMGKEYSN---GGSDSSGSSIILSYHRHAFGLGE 294 (302)
Q Consensus 227 ~~~m~~t~~WGG~lEL~ALS~~l~v~I~V~q~~~---------~~~~ig~e~~~---~~~~~~~~~I~L~Y~~h~ygLGe 294 (302)
+.-.+.++.==-++-+.+||+++++||+||.... .++.||.-|.. +.+.....||.|+|.+ .
T Consensus 268 v~~As~Pg~sLEeiHIFvLAhVLRRPIIV~~d~~lrs~~Ge~l~pi~f~GIYLPLlwpp~~C~rsPIvLgY~~------g 341 (454)
T 3zrh_A 268 LSLASQPGASLEQTHIFVLAHILRRPIIVYGVKYYKSFRGETLGYTRFQGVYLPLLWEQSFCWKSPIALGYTR------G 341 (454)
T ss_dssp HHHTTSTTCCCCHHHHHHHHHHTTSCEEEEECSSCC-----CCCCCCCCEEECCTTSCGGGSCSCCEEEEEET------T
T ss_pred HHHhcCCcchHHHHHHHHHHHHhcCCeEEeccccccccCCCcCCCcccceeeccCcCCHHHhcCCceEEEecc------c
Confidence 5544555544446779999999999999998532 11223322221 1233456899999997 5
Q ss_pred ccccccC
Q 022093 295 HYNSVIP 301 (302)
Q Consensus 295 HYnSl~p 301 (302)
||.++++
T Consensus 342 HFsaLV~ 348 (454)
T 3zrh_A 342 HFSALVA 348 (454)
T ss_dssp EEEEEEE
T ss_pred ceeeeee
Confidence 9999876
No 11
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=57.26 E-value=31 Score=29.53 Aligned_cols=60 Identities=20% Similarity=0.254 Sum_probs=42.0
Q ss_pred cccccccHHHHHHhHHHHHHHHHHHHHHHHhhh------ccCChhHHHhhhHHHHHHHHHHHHHHHHHHH
Q 022093 35 SQKKQETRDEMLSRHRKEISQLQNKETELKKAA------AKGSKAEQKAKKKQVEEEISRLSAKLREKHA 98 (302)
Q Consensus 35 ~~~~~e~~eel~~RHrkE~keLq~~i~~~Kk~a------~kg~K~~~Kk~rK~v~~e~~~le~el~~rh~ 98 (302)
|.+....+.+|.+.++.+.++|..++..++... ++.|. .+=+.+.+|+..|..+|...+.
T Consensus 69 T~EQq~ql~~I~~e~r~~~~~Lr~ql~akr~EL~aL~~a~~~De----akI~aL~~Ei~~Lr~qL~~~R~ 134 (175)
T 3lay_A 69 TTEQQATAQKIYDDYYTQTSALRQQLISKRYEYNALLTASSPDT----AKINAVAKEMESLGQKLDEQRV 134 (175)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSCCH----HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCH----HHHHHHHHHHHHHHHHHHHHHH
Confidence 445555567888999999888876665544433 34554 5667888999999988876554
No 12
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=42.47 E-value=1.1e+02 Score=24.52 Aligned_cols=50 Identities=26% Similarity=0.415 Sum_probs=34.7
Q ss_pred ccHHHHHHhHHHHHHHHHHHHHHHHhhhccCChhHHHhhhHHHHHHHHHHHHHHHHHH
Q 022093 40 ETRDEMLSRHRKEISQLQNKETELKKAAAKGSKAEQKAKKKQVEEEISRLSAKLREKH 97 (302)
Q Consensus 40 e~~eel~~RHrkE~keLq~~i~~~Kk~a~kg~K~~~Kk~rK~v~~e~~~le~el~~rh 97 (302)
..++.++-.=+.|...|++.+..++--+- .-=-++...|..||++|.+..
T Consensus 11 d~rD~~Ie~Lkreie~lk~ele~l~~E~q--------~~v~ql~~~i~~Le~eL~e~r 60 (120)
T 3i00_A 11 DEKDHLIERLYREISGLKAQLENMKTESQ--------RVVLQLKGHVSELEADLAEQQ 60 (120)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHH
Confidence 34566677777788888887777765544 334577778888888887754
No 13
>1jad_A PLC-beta, phospholipase C beta; alpha helical coiled coil, hydrolase; 2.40A {Meleagris gallopavo} SCOP: h.4.10.1
Probab=36.82 E-value=1.1e+02 Score=27.71 Aligned_cols=30 Identities=27% Similarity=0.461 Sum_probs=21.5
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 022093 76 KAKKKQVEEEISRLSAKLREKHAKELASLG 105 (302)
Q Consensus 76 Kk~rK~v~~e~~~le~el~~rh~~EL~~l~ 105 (302)
+.++.-+...|..|..=+.+.|..+|..|.
T Consensus 100 ~~k~~Hl~eq~~~Lk~l~~e~Q~~QmK~Lk 129 (251)
T 1jad_A 100 RRKEQHATEQTAKITELAREKQIAELKALK 129 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666777777777777777777777775
No 14
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=36.21 E-value=77 Score=24.12 Aligned_cols=41 Identities=22% Similarity=0.477 Sum_probs=32.5
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHhhhccCChhHHHhhhHHHHHHHHHHHHHHH
Q 022093 42 RDEMLSRHRKEISQLQNKETELKKAAAKGSKAEQKAKKKQVEEEISRLSAKLR 94 (302)
Q Consensus 42 ~eel~~RHrkE~keLq~~i~~~Kk~a~kg~K~~~Kk~rK~v~~e~~~le~el~ 94 (302)
...+...+..++++|+.+|..++.... .+..++..|+.++.
T Consensus 62 ~~~~i~~~~~~l~~l~~~i~~l~~~i~------------~l~~~~~~l~~~~~ 102 (112)
T 1l8d_A 62 REELLSKYHLDLNNSKNTLAKLIDRKS------------ELERELRRIDMEIK 102 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHH
Confidence 456888999999999999998886554 66777777777776
No 15
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=35.64 E-value=31 Score=20.24 Aligned_cols=17 Identities=35% Similarity=0.528 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHHhh
Q 022093 50 RKEISQLQNKETELKKA 66 (302)
Q Consensus 50 rkE~keLq~~i~~~Kk~ 66 (302)
-||+.|||.++..++|.
T Consensus 7 ykeledlqerlrklrkk 23 (27)
T 3twe_A 7 YKELEDLQERLRKLRKK 23 (27)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 47888999988777653
No 16
>3he5_B Synzip2; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=35.54 E-value=98 Score=20.66 Aligned_cols=36 Identities=33% Similarity=0.549 Sum_probs=23.5
Q ss_pred HHhHHHHHHHHHHHHHHHHhhhccCChhHHHhhhHHHHHHHHHHHHHH
Q 022093 46 LSRHRKEISQLQNKETELKKAAAKGSKAEQKAKKKQVEEEISRLSAKL 93 (302)
Q Consensus 46 ~~RHrkE~keLq~~i~~~Kk~a~kg~K~~~Kk~rK~v~~e~~~le~el 93 (302)
.+|-+|..-.|...-|.+.|... .+.+||++||.|.
T Consensus 12 iarlkkdnlqlerdeqnlekiia------------nlrdeiarlenev 47 (52)
T 3he5_B 12 IARLKKDNLQLERDEQNLEKIIA------------NLRDEIARLENEV 47 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHH
T ss_pred HHHHhhhhhhhhhhHhhHHHHHH------------HHHHHHHHHHHHH
Confidence 45555555555556666666555 6778888888775
No 17
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=35.30 E-value=78 Score=25.49 Aligned_cols=19 Identities=21% Similarity=0.384 Sum_probs=8.6
Q ss_pred HHhHHHHHHHHHHHHHHHH
Q 022093 46 LSRHRKEISQLQNKETELK 64 (302)
Q Consensus 46 ~~RHrkE~keLq~~i~~~K 64 (302)
.++-.+..++|++.|+.|+
T Consensus 66 kaq~q~~vqeLqgEI~~Ln 84 (121)
T 3mq7_A 66 KAQGQKKVEELEGEITTLN 84 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3333344555555554443
No 18
>4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens}
Probab=33.37 E-value=72 Score=25.10 Aligned_cols=45 Identities=13% Similarity=0.231 Sum_probs=28.9
Q ss_pred ccHHHHHHhHHHHHHHHHHHHHHHHhhhccCChhHHHhhhHHHHHHHHHHHHHHHHH
Q 022093 40 ETRDEMLSRHRKEISQLQNKETELKKAAAKGSKAEQKAKKKQVEEEISRLSAKLREK 96 (302)
Q Consensus 40 e~~eel~~RHrkE~keLq~~i~~~Kk~a~kg~K~~~Kk~rK~v~~e~~~le~el~~r 96 (302)
+.+++..+.=++|.++....+..+|+... .+..+++.|...|++|
T Consensus 40 Ee~eE~~aql~Re~~eK~re~e~~Kr~~~------------~L~~~~~~lk~~L~qR 84 (103)
T 4h22_A 40 LELEEQLAESRRQYEEKNKEFEREKHAHS------------ILQFQFAEVKEALKQR 84 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHH
Confidence 33455566666666666666666666555 5677777777777765
No 19
>1mdc_A Insect fatty acid binding protein; HET: PLM; 1.75A {Manduca sexta} SCOP: b.60.1.2
Probab=31.11 E-value=68 Score=25.71 Aligned_cols=34 Identities=9% Similarity=0.006 Sum_probs=24.9
Q ss_pred hHhHHHHHHHhhcCCccCcHHHHHHHHHhhcccEEEEeCC
Q 022093 220 VERFENYCKEVESTAAWGGELELRALTHCLRKHIMIYSGS 259 (302)
Q Consensus 220 ~~~feeY~~~m~~t~~WGG~lEL~ALS~~l~v~I~V~q~~ 259 (302)
.++|++|+..|- =...++.++..++..+.|-+.+
T Consensus 13 seNfdeylkalG------v~~~~rk~a~~~kp~~ei~~~G 46 (132)
T 1mdc_A 13 QENFDGFLKSAG------LSDDKIQALVSDKPTQKMEANG 46 (132)
T ss_dssp EESHHHHHHTTT------CCHHHHHHHHHCCCEEEEEEET
T ss_pred ccCHHHHHHHhC------CCHHHHhhhccCCceEEEEEeC
Confidence 368999999884 3468889998888555555543
No 20
>2xu6_A MDV1 coiled coil; protein binding, mitochondrial outer membrane, adapter prote organelle division; 2.70A {Saccharomyces cerevisiae}
Probab=30.05 E-value=82 Score=23.22 Aligned_cols=30 Identities=20% Similarity=0.388 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHhhhccCChhHHHhhhHHHHHHHHHHHHH
Q 022093 51 KEISQLQNKETELKKAAAKGSKAEQKAKKKQVEEEISRLSAK 92 (302)
Q Consensus 51 kE~keLq~~i~~~Kk~a~kg~K~~~Kk~rK~v~~e~~~le~e 92 (302)
-|.+|+-.||..|+ ..|+-|.+.+|.+|.+
T Consensus 21 sEI~EID~Ki~nL~------------~mR~ivldRlA~lEqd 50 (72)
T 2xu6_A 21 SEIRDIEVEVENLR------------QKKEKLLGKIANIEQN 50 (72)
T ss_dssp HHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH------------HHHHHHHHHHHHHHhh
Confidence 58899999999986 5688899999998864
No 21
>3azd_A Short alpha-tropomyosin, transcription factor GCN; coiled-coil, actin-binding protein, muscle protein; 0.98A {Rattus norvegicus} PDB: 1ihq_A 2k8x_A
Probab=29.64 E-value=15 Score=23.59 Aligned_cols=29 Identities=21% Similarity=0.395 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHhhhccCChhHHHhhhHHHHHHHHHHHHHH
Q 022093 53 ISQLQNKETELKKAAAKGSKAEQKAKKKQVEEEISRLSAKL 93 (302)
Q Consensus 53 ~keLq~~i~~~Kk~a~kg~K~~~Kk~rK~v~~e~~~le~el 93 (302)
...|+.||++|...+- .+.++...++.+|
T Consensus 6 i~avKkKiq~lq~q~d------------~aee~~~~~~~~l 34 (37)
T 3azd_A 6 LEAVRRKIRSLQEQNY------------HLENEVARLKKLV 34 (37)
T ss_dssp CHHHHHHHHHHHHHTT------------TTHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHH------------HHHHHHHHHHHHh
Confidence 4567777777776544 4556666665554
No 22
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=28.86 E-value=1.3e+02 Score=21.11 Aligned_cols=35 Identities=26% Similarity=0.436 Sum_probs=23.0
Q ss_pred hHHHHHHHHHHHHHHHHhhhccCChhHHHhhhHHHHHHHHHHHHHHH
Q 022093 48 RHRKEISQLQNKETELKKAAAKGSKAEQKAKKKQVEEEISRLSAKLR 94 (302)
Q Consensus 48 RHrkE~keLq~~i~~~Kk~a~kg~K~~~Kk~rK~v~~e~~~le~el~ 94 (302)
+.+.+..+|+.++..|+. ...++..+|+.|+.|+.
T Consensus 20 KKk~~~~~le~~~~~L~~------------~N~~L~~~i~~L~~E~~ 54 (63)
T 1ci6_A 20 KKRAEQEALTGECKELEK------------KNEALKERADSLAKEIQ 54 (63)
T ss_dssp HHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHH
Confidence 445566677777777753 33477788888877754
No 23
>1jad_A PLC-beta, phospholipase C beta; alpha helical coiled coil, hydrolase; 2.40A {Meleagris gallopavo} SCOP: h.4.10.1
Probab=28.81 E-value=2.9e+02 Score=24.87 Aligned_cols=19 Identities=11% Similarity=0.190 Sum_probs=13.7
Q ss_pred HHHHHHhHHHHHHHHHHHH
Q 022093 42 RDEMLSRHRKEISQLQNKE 60 (302)
Q Consensus 42 ~eel~~RHrkE~keLq~~i 60 (302)
+-.|..+|-+|.|||+.+.
T Consensus 125 mK~Lk~~~ErE~KELkk~q 143 (251)
T 1jad_A 125 LKALKESSESNIKDIKKKL 143 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3456778888888887543
No 24
>1gmj_A ATPase inhibitor; coiled-coil structure, P dependent oligomerization, ATP hydrolysis; 2.2A {Bos taurus} SCOP: h.4.8.1 PDB: 1ohh_H* 1hf9_A
Probab=27.46 E-value=68 Score=24.35 Aligned_cols=22 Identities=32% Similarity=0.614 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhc
Q 022093 83 EEEISRLSAKLREKHAKELASLG 105 (302)
Q Consensus 83 ~~e~~~le~el~~rh~~EL~~l~ 105 (302)
.++|.+||.++ +||+.-|..|.
T Consensus 57 ~~ei~~le~~i-~rhk~~i~~l~ 78 (84)
T 1gmj_A 57 AKEIERLQKEI-ERHKQSIKKLK 78 (84)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HHHHHHHHHhh
Confidence 34566777776 56776666664
No 25
>1ftp_A Muscle fatty acid binding protein; binding protein(fatty acid); 2.20A {Schistocerca gregaria} SCOP: b.60.1.2 PDB: 2flj_A*
Probab=26.26 E-value=1.2e+02 Score=24.11 Aligned_cols=37 Identities=19% Similarity=0.044 Sum_probs=26.8
Q ss_pred hHhHHHHHHHhhcCCccCcHHHHHHHHHhhcccEEEEeCCCCc
Q 022093 220 VERFENYCKEVESTAAWGGELELRALTHCLRKHIMIYSGSFPD 262 (302)
Q Consensus 220 ~~~feeY~~~m~~t~~WGG~lEL~ALS~~l~v~I~V~q~~~~~ 262 (302)
.++|++|+..+- -...++.++......+.|-+.++..
T Consensus 14 seNfdeylkalG------v~~~~rk~a~~~kp~~ei~~~~Gd~ 50 (133)
T 1ftp_A 14 QTNFEEYMKAIG------VGAIERKAGLALSPVIELEILDGDK 50 (133)
T ss_dssp EESHHHHHHHTT------CCHHHHHHHTTCCCEEEEEECSSSE
T ss_pred ccCHHHHHHHhC------CCHHHHHHhhcCCceEEEEEcCCCE
Confidence 368999999884 3468889998888666666624443
No 26
>3viq_B Mating-type switching protein SWI5; recombination activator; 2.20A {Schizosaccharomyces pombe} PDB: 3vir_A*
Probab=24.96 E-value=76 Score=24.10 Aligned_cols=40 Identities=33% Similarity=0.399 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHhhhccCChhHHHhhhHHHHHHHHHHHHHH--------HHHHHHHHHHh
Q 022093 53 ISQLQNKETELKKAAAKGSKAEQKAKKKQVEEEISRLSAKL--------REKHAKELASL 104 (302)
Q Consensus 53 ~keLq~~i~~~Kk~a~kg~K~~~Kk~rK~v~~e~~~le~el--------~~rh~~EL~~l 104 (302)
+..|+++|..|+- .+.++..+|+.++++| -.+|=.-|..+
T Consensus 3 ~~~L~~~i~~L~~------------q~~~L~~ei~~~~a~L~~~~~~~~~~~hI~~Lh~Y 50 (85)
T 3viq_B 3 KSQLESRVHLLEQ------------QKEQLESSLQDALAKLKNRDAKQTVQKHIDLLHTY 50 (85)
T ss_dssp HHHHHHHHHHHHH------------HHHHHHHHHHHHHHTCSSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH------------HHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Confidence 4567777777763 3447777888877644 34555555444
No 27
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=24.86 E-value=2.4e+02 Score=21.82 Aligned_cols=42 Identities=19% Similarity=0.397 Sum_probs=22.3
Q ss_pred hHHHHHHHHHHHHHHHHhhhccCChhHHHhhhHHHHHHHHHHHHHHH
Q 022093 48 RHRKEISQLQNKETELKKAAAKGSKAEQKAKKKQVEEEISRLSAKLR 94 (302)
Q Consensus 48 RHrkE~keLq~~i~~~Kk~a~kg~K~~~Kk~rK~v~~e~~~le~el~ 94 (302)
+-..+.++....+..|+.... +.+..|..+..+..+++.||+
T Consensus 16 ~le~~~~~~~~e~~~L~~~l~-----eE~~~R~~aE~~~~~ie~ElE 57 (97)
T 2eqb_B 16 TLKRELSDRDDEVKRLREDIA-----KENELRTKAEEEADKLNKEVE 57 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHH
Confidence 333555555555555555444 123455666666666665554
No 28
>1lpj_A Retinol-binding protein IV, cellular; cellular retinol-binding protein, CRBP, vitamin A, ILBPS, transport protein; 2.00A {Homo sapiens} SCOP: b.60.1.2
Probab=23.30 E-value=1e+02 Score=24.55 Aligned_cols=34 Identities=18% Similarity=0.331 Sum_probs=24.8
Q ss_pred hHhHHHHHHHhhcCCccCcHHHHHHHHHhhcccEEEEeCC
Q 022093 220 VERFENYCKEVESTAAWGGELELRALTHCLRKHIMIYSGS 259 (302)
Q Consensus 220 ~~~feeY~~~m~~t~~WGG~lEL~ALS~~l~v~I~V~q~~ 259 (302)
.++|++|+..+- -...++.++...+..+.|-+.+
T Consensus 13 seNfdeylkalG------v~~~~rk~a~~~kp~~ei~~~G 46 (133)
T 1lpj_A 13 SDNFEGYMLALG------IDFATRKIAKLLKPQKVIEQNG 46 (133)
T ss_dssp EESHHHHHHHHT------CCHHHHHHHTTCCCEEEEEEET
T ss_pred CcCHHHHHHHhC------CCHHHHHHHHhCCCeEEEEEcC
Confidence 378999999984 3468888998887655555543
No 29
>4a5u_A RNA replicase polyprotein; transferase-RNA binding protein complex, cysteine proteinase; 2.00A {Turnip yellow mosaic virus}
Probab=23.14 E-value=2.7e+02 Score=23.42 Aligned_cols=89 Identities=20% Similarity=0.184 Sum_probs=55.5
Q ss_pred eeCCCCchHHHHHHHHHhcCCCCCCcchhhhHhHHHHHHHhhcC--------CccCc-HHHHHHHHHhhcccEEEEeCCC
Q 022093 190 DIKPDGHCLYRAVEDQLAHLSGGEESAQSQVERFENYCKEVEST--------AAWGG-ELELRALTHCLRKHIMIYSGSF 260 (302)
Q Consensus 190 ~Ip~DGnCLFrAIadQL~~~~~~~~fd~~~~~~feeY~~~m~~t--------~~WGG-~lEL~ALS~~l~v~I~V~q~~~ 260 (302)
.+| .-+||--||+.|+... .+++.+++..|--+ ...|= --.+.|||..|+....|+...+
T Consensus 58 P~P-~~~CLL~Ais~at~~s----------~~~LW~~Lc~~lPDSlL~n~ei~~~GLSTDhltaLa~~~~~~c~~hs~~~ 126 (160)
T 4a5u_A 58 PQP-TLNCLLSAVSDQTKVS----------EEHLWESLQTILPDSQLSNEETNTLGLSTEHLTALAHLYNFQATVYSDRG 126 (160)
T ss_dssp CCC-SSCHHHHHHHHHHCCC----------HHHHHHHHTTTSCGGGTSSHHHHHHCCCHHHHHHHHHHHTEEEEEEETTE
T ss_pred CCc-chhhhHHHHhhccCCC----------HHHHHHHHHHhCchhhcCchhhhhcCCcHHHHHHHHHHHheEEEEEcCCc
Confidence 455 4899999999988542 12233333322211 11221 1237899999999999998775
Q ss_pred CceEecCCcCCCCCCCCCCeEEEEeccCCCCCCCcccccc
Q 022093 261 PDVEMGKEYSNGGSDSSGSSIILSYHRHAFGLGEHYNSVI 300 (302)
Q Consensus 261 ~~~~ig~e~~~~~~~~~~~~I~L~Y~~h~ygLGeHYnSl~ 300 (302)
.+.+|-.- ....+.|.|.. |--.||....
T Consensus 127 -~~~~Gi~~-------as~~~~I~ht~---G~P~HFs~~~ 155 (160)
T 4a5u_A 127 -PILFGPSD-------TIKRIDITHTT---GPPSHFSPGK 155 (160)
T ss_dssp -EEEESCSS-------CSEEEEEEEEC---SSSCEEEESC
T ss_pred -eEEeecCC-------CceEEEEEeCC---CCCCCccCCc
Confidence 45677542 35678888875 4457886544
No 30
>3ppt_A Sodium-calcium exchanger; fatty acid transporter, lipid binding proteins, squid nerve, regulatory factor, beta-sandwich, fatty acid; HET: PAM; 1.28A {Loligo pealei} SCOP: b.60.1.0 PDB: 3pp6_A*
Probab=23.13 E-value=1.3e+02 Score=23.99 Aligned_cols=34 Identities=21% Similarity=0.304 Sum_probs=24.8
Q ss_pred hHhHHHHHHHhhcCCccCcHHHHHHHHHhhcccEEEEeCC
Q 022093 220 VERFENYCKEVESTAAWGGELELRALTHCLRKHIMIYSGS 259 (302)
Q Consensus 220 ~~~feeY~~~m~~t~~WGG~lEL~ALS~~l~v~I~V~q~~ 259 (302)
.++|++|+..|. =...++-++..++..+.|-+.+
T Consensus 13 seNfdeymkalG------v~~~~rk~~~~~kp~~~I~~~G 46 (133)
T 3ppt_A 13 SENFDDYMKAVG------VGMVMRKMANAATPTQEIKIDG 46 (133)
T ss_dssp EESHHHHHHHHT------CCHHHHHHHHHCCCEEEEEEET
T ss_pred ccCHHHHHHHhC------CCHHHHhhhhcCCcEEEEEECC
Confidence 378999999884 3467888888888666555544
No 31
>1vyf_A SM14, 14 kDa fatty acid binding protein; transport protein; HET: OLA; 1.85A {Schistosoma mansoni} SCOP: b.60.1.2 PDB: 1vyg_A* 2poa_A
Probab=23.02 E-value=1.1e+02 Score=24.48 Aligned_cols=34 Identities=6% Similarity=0.126 Sum_probs=24.9
Q ss_pred hHhHHHHHHHhhcCCccCcHHHHHHHHHhhcccEEEEeCC
Q 022093 220 VERFENYCKEVESTAAWGGELELRALTHCLRKHIMIYSGS 259 (302)
Q Consensus 220 ~~~feeY~~~m~~t~~WGG~lEL~ALS~~l~v~I~V~q~~ 259 (302)
.++|++|+..+- -...++.++..+...+.|-+.+
T Consensus 15 seNfdeylkalG------v~~~~rk~a~~~kp~~ei~~~G 48 (135)
T 1vyf_A 15 SHNFDAVMSKLG------VSWATRQIGNTVTPTVTFTMDG 48 (135)
T ss_dssp EESHHHHHHHTT------CCHHHHHHHTTCCCEEEEEEET
T ss_pred CcCHHHHHHHcC------CCHHHHHhhccCCceEEEEEcC
Confidence 378999999984 3468888898887666555543
No 32
>1gmj_A ATPase inhibitor; coiled-coil structure, P dependent oligomerization, ATP hydrolysis; 2.2A {Bos taurus} SCOP: h.4.8.1 PDB: 1ohh_H* 1hf9_A
Probab=22.30 E-value=2.4e+02 Score=21.25 Aligned_cols=23 Identities=35% Similarity=0.472 Sum_probs=15.5
Q ss_pred HHhHHHHHHHHHHHHHHHHhhhc
Q 022093 46 LSRHRKEISQLQNKETELKKAAA 68 (302)
Q Consensus 46 ~~RHrkE~keLq~~i~~~Kk~a~ 68 (302)
+..|++|+++|+..|...|+.+.
T Consensus 53 l~~h~~ei~~le~~i~rhk~~i~ 75 (84)
T 1gmj_A 53 ISHHAKEIERLQKEIERHKQSIK 75 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677777777777766666554
No 33
>2rcq_A CRBP-II, retinol-binding protein II, cellular; cellular retinol binding protein II, lipid-binding protein, X-RAY, cytoplasm, transport, vitamin A; HET: TLA; 1.20A {Homo sapiens} PDB: 2rct_A* 1b4m_A 1eii_A* 1opa_A 1opb_A* 1kqw_A* 1kqx_A
Probab=21.68 E-value=1.3e+02 Score=24.42 Aligned_cols=34 Identities=24% Similarity=0.382 Sum_probs=25.2
Q ss_pred hHhHHHHHHHhhcCCccCcHHHHHHHHHhhcccEEEEeCC
Q 022093 220 VERFENYCKEVESTAAWGGELELRALTHCLRKHIMIYSGS 259 (302)
Q Consensus 220 ~~~feeY~~~m~~t~~WGG~lEL~ALS~~l~v~I~V~q~~ 259 (302)
.++|++|+..|-- ...++.+|..++..+.|-+.+
T Consensus 17 seNfdeylkalGv------~~~~rk~a~~~kp~~ei~~~G 50 (141)
T 2rcq_A 17 NENFEGYMKALDI------DFATRKIAVRLTQTKVIDQDG 50 (141)
T ss_dssp EESHHHHHHHTTC------CHHHHHHHTTCCCEEEEEEET
T ss_pred ccCHHHHHHHhCC------CHHHHHHhhcCCcEEEEEEeC
Confidence 4789999999843 467888998888666555544
No 34
>1o8v_A Fatty acid binding protein homolog; lipid binding protein, hydatid disease, fatty-acid transport; HET: PLM; 1.60A {Echinococcus granulosus} SCOP: b.60.1.2
Probab=21.67 E-value=1.5e+02 Score=23.59 Aligned_cols=32 Identities=9% Similarity=0.305 Sum_probs=24.6
Q ss_pred hHhHHHHHHHhhcCCccCcHHHHHHHHHhhcccEEEEe
Q 022093 220 VERFENYCKEVESTAAWGGELELRALTHCLRKHIMIYS 257 (302)
Q Consensus 220 ~~~feeY~~~m~~t~~WGG~lEL~ALS~~l~v~I~V~q 257 (302)
.++|++|+..+- -...++.++...+..+.|-+
T Consensus 14 seNfdeylkalG------v~~~~rk~a~~~kp~~ei~~ 45 (134)
T 1o8v_A 14 SEGFDKIMERLG------VDFVTRKMGNLVKPNLIVTD 45 (134)
T ss_dssp EESHHHHHHHHT------CCHHHHHHHHHCCCEEEEEE
T ss_pred CcCHHHHHHHcC------CCHHHHHHhhcCCceEEEEE
Confidence 378999999984 34688889988876666655
No 35
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D
Probab=21.32 E-value=1.3e+02 Score=21.09 Aligned_cols=14 Identities=29% Similarity=0.534 Sum_probs=5.8
Q ss_pred HHHHHHHHHHHHHH
Q 022093 81 QVEEEISRLSAKLR 94 (302)
Q Consensus 81 ~v~~e~~~le~el~ 94 (302)
.+..+++.|..+|.
T Consensus 48 ~L~~ev~~Lr~~l~ 61 (63)
T 2dgc_A 48 HLENEVARLKKLVG 61 (63)
T ss_dssp HHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHh
Confidence 44445555544443
No 36
>3pzp_A DNA polymerase kappa; DNA nucleotidyltransferase, DNA binding nucleotide binding M binding, nucleus; HET: DNA TTD DTP; 3.34A {Homo sapiens}
Probab=21.24 E-value=70 Score=31.50 Aligned_cols=72 Identities=21% Similarity=0.253 Sum_probs=43.7
Q ss_pred CCCCcchhhhHHHHHHHHHHHHHHHHHHHhccCCC--c--hhHHHHHHHHhc-cCCceEeeeCCCCchHHHHHHHHH
Q 022093 135 QAKPSKGTKRREKRAQQEAAREQRIQEEQSNIVSD--R--TVEDEKLEKKLG-PLGLTVNDIKPDGHCLYRAVEDQL 206 (302)
Q Consensus 135 ~~~~~Ka~~Rr~kr~a~~~~r~eri~~e~~~~~~~--r--~~E~~~l~~~L~-~~gL~i~~Ip~DGnCLFrAIadQL 206 (302)
..+.||=.++..+|.++..++++++.+..+..... + ..+.+.+...|. .+.+...-+-=|-+|||.||....
T Consensus 32 ~s~gs~f~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~r~~~r~I~hiDmDaFYAsvE~~~ 108 (517)
T 3pzp_A 32 ATKGSRFYGNELKKEKQVNQRIENMMQQKAQITSQQLRKAQLQVDRFAMELEQSRNLSNTIVHIDMDAFYAAVEMRD 108 (517)
T ss_dssp TTTTCHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHCCCSCCEEEEEESSHHHHHHHHH
T ss_pred hcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHhccCcCcEEEEEecCcHHHHHHHHh
Confidence 34566777777777777778888887665554332 1 122333444443 245544444458999999998644
No 37
>1mvg_A Liver basic fatty acid binding protein; beta-barrel, calycin, ten antiparallel beta strands, helix- turn-helix motif, transport protein; NMR {Gallus gallus} SCOP: b.60.1.2 PDB: 1tvq_A 1tw4_A* 1zry_A 2jn3_A* 2k62_A*
Probab=20.71 E-value=1.3e+02 Score=23.74 Aligned_cols=34 Identities=15% Similarity=0.252 Sum_probs=24.7
Q ss_pred hHhHHHHHHHhhcCCccCcHHHHHHHHHhhcccEEEEeCC
Q 022093 220 VERFENYCKEVESTAAWGGELELRALTHCLRKHIMIYSGS 259 (302)
Q Consensus 220 ~~~feeY~~~m~~t~~WGG~lEL~ALS~~l~v~I~V~q~~ 259 (302)
.++|++|+..|-- ...++.++..++..+.|-+.+
T Consensus 11 seNfdeylkalGv------~~~~rk~a~~~kp~~ei~~~G 44 (125)
T 1mvg_A 11 QENYEEFLKALAL------PEDLIKMARDIKPIVEIQQKG 44 (125)
T ss_dssp EESHHHHHHHSSS------CHHHHHHHHTCCCEEEEEEET
T ss_pred ccCHHHHHHHcCC------CHHHHHhhccCCcEEEEEEeC
Confidence 3689999999843 467888888887555555543
No 38
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=20.59 E-value=2.2e+02 Score=23.13 Aligned_cols=15 Identities=20% Similarity=0.468 Sum_probs=7.7
Q ss_pred HHHHHHHHHHHHHHH
Q 022093 80 KQVEEEISRLSAKLR 94 (302)
Q Consensus 80 K~v~~e~~~le~el~ 94 (302)
..+..++.+||.+|+
T Consensus 120 ~~l~~~~~~le~~~~ 134 (138)
T 3hnw_A 120 NKYQKNIVKLETELN 134 (138)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 444555555555544
No 39
>1p6p_A Fatty acid-binding protein, liver; beta barrel, lipid binding protein; 2.50A {Bufo arenarum} SCOP: b.60.1.2
Probab=20.01 E-value=1.3e+02 Score=23.66 Aligned_cols=34 Identities=18% Similarity=0.243 Sum_probs=24.5
Q ss_pred hHhHHHHHHHhhcCCccCcHHHHHHHHHhhcccEEEEeCC
Q 022093 220 VERFENYCKEVESTAAWGGELELRALTHCLRKHIMIYSGS 259 (302)
Q Consensus 220 ~~~feeY~~~m~~t~~WGG~lEL~ALS~~l~v~I~V~q~~ 259 (302)
.++|++|+..|-- ...++.++..++..+.|-+.+
T Consensus 11 seNfdeymkalGv------~~~~rk~a~~~kp~~ei~~~G 44 (125)
T 1p6p_A 11 QENYENFLRTVGL------PEDIIKVAKDVNPVIEIEQNG 44 (125)
T ss_dssp EESHHHHHHHHTC------CHHHHHHHTTCCCEEEEEECS
T ss_pred ccCHHHHHHHhCC------CHHHHHhhccCCcEEEEEEcC
Confidence 3689999999843 467888888887555555543
Done!