BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>022098
MFAALFSKLGVPIKTTVSATVLEEALNGMVTVRPLLLDQHITRKVEKQCAHFYSVTITEE
EARAGFVCRVQSSDKSKFKLLYFDREGTGGLSLALQEDCTKTGKVTSAGMYFLGFPVYRL
DQTATSMAAAKDPDAAFFKKLDGFQPCEITELKAGTHVFAVYGDNFFKSASYMIEALCAA
PFTEEKENLRAVEAEILSKRAELSKFESEYREVLAQFTEMTSRYAQEMQAIDELLKQRNE
IHASYTTAPPMKRSTSKNRSRGSPKETKEEGQVRDKKPTMRDRPKKKKWFNIHLKADKRN
KC

High Scoring Gene Products

Symbol, full name Information P value
ARL1
ARG1-like 1
protein from Arabidopsis thaliana 3.3e-102
ARL2
ARG1-like 2
protein from Arabidopsis thaliana 7.5e-89
ARG1
AT1G68370
protein from Arabidopsis thaliana 1.3e-84
dnj-16 gene from Caenorhabditis elegans 5.9e-25

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  022098
        (302 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2032437 - symbol:ARL1 "ARG1-like 1" species:37...  1013  3.3e-102  1
TAIR|locus:2202725 - symbol:ARL2 "ARG1-like 2" species:37...   887  7.5e-89   1
TAIR|locus:2202334 - symbol:ARG1 "ALTERED RESPONSE TO GRA...   847  1.3e-84   1
WB|WBGene00001034 - symbol:dnj-16 species:6239 "Caenorhab...   284  5.9e-25   1


>TAIR|locus:2032437 [details] [associations]
            symbol:ARL1 "ARG1-like 1" species:3702 "Arabidopsis
            thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0006457 "protein
            folding" evidence=IEA;ISS] [GO:0031072 "heat shock protein binding"
            evidence=IEA] [GO:0051082 "unfolded protein binding" evidence=IEA]
            [GO:0009737 "response to abscisic acid stimulus" evidence=IMP]
            InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0006457 GO:GO:0016020
            Gene3D:1.10.287.110 PRINTS:PR00625 SMART:SM00271 SUPFAM:SSF46565
            PROSITE:PS00636 PROSITE:PS50076 eggNOG:COG2214 HOGENOM:HOG000241767
            ProtClustDB:CLSN2682281 EMBL:AY226825 EMBL:AC002396 EMBL:AY074564
            IPI:IPI00549044 PIR:T00641 RefSeq:NP_173822.2 UniGene:At.41480
            ProteinModelPortal:Q8VXV4 SMR:Q8VXV4 STRING:Q8VXV4 PaxDb:Q8VXV4
            PRIDE:Q8VXV4 EnsemblPlants:AT1G24120.1 GeneID:839024
            KEGG:ath:AT1G24120 TAIR:At1g24120 InParanoid:Q8VXV4 OMA:KERNEIH
            PhylomeDB:Q8VXV4 Genevestigator:Q8VXV4 GermOnline:AT1G24120
            Uniprot:Q8VXV4
        Length = 436

 Score = 1013 (361.7 bits), Expect = 3.3e-102, P = 3.3e-102
 Identities = 203/299 (67%), Positives = 237/299 (79%)

Query:     1 MFAALFSKLGVPIKTTVSATVLEEALNGMVTVRPLLLDQHITRKVEKQCAHFYSVTITEE 60
             +FAALFSKLGVPIKT+VSAT+LEEALNG V+V PL+L Q +++KVEKQCAHFY+VTI+EE
Sbjct:   109 VFAALFSKLGVPIKTSVSATILEEALNGRVSVDPLVLGQAVSKKVEKQCAHFYAVTISEE 168

Query:    61 EARAGFVCRVQSSDKSKFKLLYFDREGTGGLSLALQEDCTKTGKVTSAGMYFLGFPVYRL 120
             E  AG VCRV+SS KSKFKLLYFD+E   GLSLALQED  +TGK+TSAGMYFLGFPVYRL
Sbjct:   169 EVSAGLVCRVESSSKSKFKLLYFDQEANSGLSLALQEDSKRTGKITSAGMYFLGFPVYRL 228

Query:   121 DQTATSMXXXXXXXXXXXXXLDGFQPCEITELKAGTHVFAVYGDNFFKSASYMIEALCAA 180
             D T  SM             LDGFQ CE+TELKAGTHVFAVYGDNFFK+ SY I+ LCAA
Sbjct:   229 DHTINSMAQAKDPETAFFKKLDGFQQCEVTELKAGTHVFAVYGDNFFKNVSYTIQVLCAA 288

Query:   181 PFTEEKENLRAVEAEILSKRAELSKFESEYREVLAQFTEMTSRYAQEMQAIDELLKQRNE 240
              FT+EKE+LR+VEA+IL+KRAEL+KFE+EYREVL QFT+MTSRYAQEMQ+IDELLKQRNE
Sbjct:   289 AFTQEKEDLRSVEAQILTKRAELAKFETEYREVLVQFTDMTSRYAQEMQSIDELLKQRNE 348

Query:   241 IHASYTTAPPMKRSTSKNRSRGS-----------PKETKEEGQVRDKKPTMRDRPKKKK 288
             IH++YTT P MKRS+SKNR R S           P E +EE +  +++     R K KK
Sbjct:   349 IHSAYTTIPLMKRSSSKNRMRKSSFKKAAAKAPAPTEQEEEEEEEEEEEEESSRQKNKK 407


>TAIR|locus:2202725 [details] [associations]
            symbol:ARL2 "ARG1-like 2" species:3702 "Arabidopsis
            thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0006457 "protein
            folding" evidence=IEA;ISS] [GO:0031072 "heat shock protein binding"
            evidence=IEA] [GO:0051082 "unfolded protein binding" evidence=IEA]
            InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0006457 GO:GO:0016020
            eggNOG:COG0484 Gene3D:1.10.287.110 PRINTS:PR00625 SMART:SM00271
            SUPFAM:SSF46565 PROSITE:PS00636 PROSITE:PS50076 EMBL:AC005966
            HOGENOM:HOG000241767 ProtClustDB:CLSN2682281 EMBL:AY226826
            EMBL:AK118901 EMBL:BT005502 IPI:IPI00521621 PIR:A96624
            RefSeq:NP_176206.2 UniGene:At.36742 ProteinModelPortal:Q6XL73
            SMR:Q6XL73 IntAct:Q6XL73 STRING:Q6XL73 EnsemblPlants:AT1G59980.1
            GeneID:842292 KEGG:ath:AT1G59980 TAIR:At1g59980 InParanoid:Q6XL73
            OMA:RRNEICA PhylomeDB:Q6XL73 Genevestigator:Q6XL73
            GermOnline:AT1G59980 Uniprot:Q6XL73
        Length = 414

 Score = 887 (317.3 bits), Expect = 7.5e-89, P = 7.5e-89
 Identities = 182/304 (59%), Positives = 221/304 (72%)

Query:     1 MFAALFSKLGVPIKTTVSATVLEEALNGMVTVRPLLLDQHITRKVEKQCAHFYSVTITEE 60
             +FAALF+KLGV IKTTVSA +L EALNG VT  PL++ Q ++RKVEKQ AHFYSVT+TEE
Sbjct:   112 IFAALFNKLGVQIKTTVSANLLGEALNGTVTTLPLMVGQVVSRKVEKQSAHFYSVTLTEE 171

Query:    61 EARAGFVCRVQSSDKSKFKLLYFDREGTGGLSLALQEDCTKTGKVTSAGMYFLGFPVYRL 120
             EA+ G +C+V SS K+KFKLLYFD+   GGLSLALQED  KTGK+++AG+YF GFPVYR 
Sbjct:   172 EAQDGLICKVHSSAKNKFKLLYFDQVENGGLSLALQEDSRKTGKLSTAGLYFFGFPVYRF 231

Query:   121 DQTATSMXXXXXXXXXXXXXLDGFQPCEITELKAGTHVFAVYGDNFFKSASYMIEALCAA 180
             D    S              LD FQP EITELKAG+HVFAVYGDNFFKS SY +E   +A
Sbjct:   232 DHRVNSRALSRDPETGFFKRLDAFQPFEITELKAGSHVFAVYGDNFFKSVSYTLEIFSSA 291

Query:   181 PFTEEKENLRAVEAEILSKRAELSKFESEYREVLAQFTEMTSRYAQEMQAIDELLKQRNE 240
             PF  EKE+LR+ EA+I+SKR EL KFE+EY EV AQFTEM S+   E+Q IDELLK+RNE
Sbjct:   292 PFGNEKESLRSTEAQIVSKRTELLKFEAEYHEVFAQFTEMASKCTGEVQEIDELLKRRNE 351

Query:   241 IHASYTTAPPMKRSTSKNRSRGSPK-----ETKEEGQVRDKKPTMRDRPKKKKWFNIHLK 295
             I A+YT  PP K+ +SK+RS    K     E +EEG+V  ++       KKKKW+NI L+
Sbjct:   352 ICAAYTIFPPTKQGSSKSRSWSKKKSSLLMEPREEGEVAVRE---EGGVKKKKWYNIQLR 408

Query:   296 ADKR 299
              DK+
Sbjct:   409 QDKK 412


>TAIR|locus:2202334 [details] [associations]
            symbol:ARG1 "ALTERED RESPONSE TO GRAVITY 1" species:3702
            "Arabidopsis thaliana" [GO:0006457 "protein folding"
            evidence=IEA;ISS] [GO:0031072 "heat shock protein binding"
            evidence=IEA] [GO:0051082 "unfolded protein binding" evidence=IEA]
            [GO:0008092 "cytoskeletal protein binding" evidence=TAS]
            [GO:0009638 "phototropism" evidence=IMP] [GO:0009958 "positive
            gravitropism" evidence=IMP] InterPro:IPR001623 InterPro:IPR018253
            Pfam:PF00226 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006457
            GO:GO:0000139 GO:GO:0005856 GO:GO:0005789 GO:GO:0008092
            GO:GO:0009958 eggNOG:COG0484 Gene3D:1.10.287.110 PRINTS:PR00625
            SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636 PROSITE:PS50076
            EMBL:AF089810 EMBL:AC015986 IPI:IPI00541547 PIR:E96707
            RefSeq:NP_177004.1 UniGene:At.11013 ProteinModelPortal:Q9ZSY2
            SMR:Q9ZSY2 PaxDb:Q9ZSY2 PRIDE:Q9ZSY2 EnsemblPlants:AT1G68370.1
            GeneID:843166 KEGG:ath:AT1G68370 GeneFarm:4921 TAIR:At1g68370
            HOGENOM:HOG000241767 InParanoid:Q9ZSY2 OMA:GMDMEID PhylomeDB:Q9ZSY2
            ProtClustDB:CLSN2682281 Genevestigator:Q9ZSY2 GermOnline:AT1G68370
            Uniprot:Q9ZSY2
        Length = 410

 Score = 847 (303.2 bits), Expect = 1.3e-84, P = 1.3e-84
 Identities = 167/303 (55%), Positives = 222/303 (73%)

Query:     1 MFAALFSKLGVPIKTTVSATVLEEALNGMVTVRPLLLDQHITRKVEKQCAHFYSVTITEE 60
             MFAALFSKLGVPIKTTVSA VLEEA+NG VTVRPL +   ++ KVEKQCAHF+ VTI+E+
Sbjct:   106 MFAALFSKLGVPIKTTVSANVLEEAMNGTVTVRPLPIGTSVSGKVEKQCAHFFGVTISEQ 165

Query:    61 EARAGFVCRVQSSDKSKFKLLYFDREGTGGLSLALQEDCTKTGKVTSAGMYFLGFPVYRL 120
             +A +G V RV S+ +SKFKLLYF+++ +GG  LALQE+  KTGKVTSAGMYFL F VYR+
Sbjct:   166 QAESGVVVRVTSTAQSKFKLLYFEQDSSGGYGLALQEEREKTGKVTSAGMYFLHFQVYRM 225

Query:   121 DQTATSMXXXXXXXXXXXXXLDGFQPCEITELKAGTHVFAVYGDNFFKSASYMIEALCAA 180
             D T  ++             L+G QPCE++ELKAGTH+FAVYGDNFFK+ASY IEALCA 
Sbjct:   226 DTTVNALAAAKDPESAFFKRLEGLQPCEVSELKAGTHIFAVYGDNFFKTASYTIEALCAK 285

Query:   181 PFTEEKENLRAVEAEILSKRAELSKFESEYREVLAQFTEMTSRYAQEMQAIDELLKQRNE 240
              + +  E L+ +EA+IL KR EL +FE+EYR+ LA+F E+T+RY QE Q +DELLKQR+ 
Sbjct:   286 TYEDTTEKLKEIEAQILRKRNELRQFETEYRKALARFQEVTNRYTQEKQTVDELLKQRDT 345

Query:   241 IHASYTTA--PPMKRSTSKNRSRGSPKETKEEGQVRDKKPTMRDRPK-KKKWFNIHLK-A 296
             IH++++    P     ++ + S+    E+K +G    ++    +R K K+KWFN++LK +
Sbjct:   346 IHSTFSVVKTPSGNNLSNGSSSKAQGDESKGDGDSAGEEGGTENRDKSKRKWFNLNLKGS 405

Query:   297 DKR 299
             DK+
Sbjct:   406 DKK 408


>WB|WBGene00001034 [details] [associations]
            symbol:dnj-16 species:6239 "Caenorhabditis elegans"
            [GO:0031072 "heat shock protein binding" evidence=IEA] [GO:0006457
            "protein folding" evidence=IEA] [GO:0051082 "unfolded protein
            binding" evidence=IEA] InterPro:IPR001623 InterPro:IPR018253
            Pfam:PF00226 GO:GO:0006457 Gene3D:1.10.287.110 PRINTS:PR00625
            SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636 PROSITE:PS50076
            eggNOG:COG2214 GeneTree:ENSGT00510000048685 EMBL:Z36238
            RefSeq:NP_001254890.1 ProteinModelPortal:C1P627 SMR:C1P627
            PaxDb:C1P627 EnsemblMetazoa:R74.4b GeneID:175540
            KEGG:cel:CELE_R74.4 CTD:175540 WormBase:R74.4b HOGENOM:HOG000021820
            OMA:SKFKLVL ArrayExpress:C1P627 Uniprot:C1P627
        Length = 395

 Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
 Identities = 87/273 (31%), Positives = 128/273 (46%)

Query:     1 MFAALFSKLGVPIKTTVSATVLEEALN---GM---VTVRPLLLDQHITRKVEKQCAHFYS 54
             +F ALFSKLGVPI T +   VL +A +   G    V  R L   + +T  V KQ AHFY 
Sbjct:   121 VFGALFSKLGVPIPTQIVPKVLAQARHICMGQECDVQARQLPPGETVTSSVSKQHAHFYE 180

Query:    55 VTITEEEARAGFVCRVQSSDKSKFKLLYFDREGTGGLSLALQEDCTKTGKV-TSAGMYFL 113
             + I EE  + G V  +  S  SKFKL+ FD+EG  G+ + +QE   K GK  T A M+F+
Sbjct:   181 INIQEEHRKNG-VAIICKSSSSKFKLVLFDKEG--GVRM-IQES-GKRGKAGTQADMFFV 235

Query:   114 GFPVYRLDQ-TATSMXXXXXXXXXXXXXLDGFQPCEITELKAGTHVFAVYGDNFFKSASY 172
              + V  + +  A                LD F+    T L+   H  AVYGDN+     Y
Sbjct:   236 PYNVANIQEFNAMKYHLEDKETPLAFHYLDSFEMQTATLLETRKHYIAVYGDNWISDVKY 295

Query:   173 MIEALCAAPFTEEKEN-LRAVEAEILSKRAELSKFESEYREVLAQFTEMTSRYAQEMQAI 231
              I  L   P   E+ N ++  E  I   + E+  F+ E+ E   ++ E  ++   +   I
Sbjct:   296 SITFLPVEPSAVEQLNEIQDTEKSISIIKKEMLDFQREFTEAKRKYDEAVAKLKVQDDTI 355

Query:   232 DELLKQRNEIHASYT--TAPPMKRSTSKNRSRG 262
              + L  R E++      +  P  +  S ++S G
Sbjct:   356 LKALAHREELYNEVLQKSQEPYNKKVSPSKSSG 388


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.130   0.368    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      302       289   0.00088  115 3  11 22  0.38    34
                                                     33  0.43    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  600 (64 KB)
  Total size of DFA:  189 KB (2108 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  27.31u 0.21s 27.52t   Elapsed:  00:00:01
  Total cpu time:  27.31u 0.21s 27.52t   Elapsed:  00:00:01
  Start:  Sat May 11 05:40:09 2013   End:  Sat May 11 05:40:10 2013

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