BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022098
(302 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VXV4|DNJ16_ARATH Chaperone protein dnaJ 16 OS=Arabidopsis thaliana GN=ATJ16 PE=2
SV=1
Length = 436
Score = 456 bits (1172), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/328 (67%), Positives = 262/328 (79%), Gaps = 26/328 (7%)
Query: 1 MFAALFSKLGVPIKTTVSATVLEEALNGMVTVRPLLLDQHITRKVEKQCAHFYSVTITEE 60
+FAALFSKLGVPIKT+VSAT+LEEALNG V+V PL+L Q +++KVEKQCAHFY+VTI+EE
Sbjct: 109 VFAALFSKLGVPIKTSVSATILEEALNGRVSVDPLVLGQAVSKKVEKQCAHFYAVTISEE 168
Query: 61 EARAGFVCRVQSSDKSKFKLLYFDREGTGGLSLALQEDCTKTGKVTSAGMYFLGFPVYRL 120
E AG VCRV+SS KSKFKLLYFD+E GLSLALQED +TGK+TSAGMYFLGFPVYRL
Sbjct: 169 EVSAGLVCRVESSSKSKFKLLYFDQEANSGLSLALQEDSKRTGKITSAGMYFLGFPVYRL 228
Query: 121 DQTATSMAAAKDPDAAFFKKLDGFQPCEITELKAGTHVFAVYGDNFFKSASYMIEALCAA 180
D T SMA AKDP+ AFFKKLDGFQ CE+TELKAGTHVFAVYGDNFFK+ SY I+ LCAA
Sbjct: 229 DHTINSMAQAKDPETAFFKKLDGFQQCEVTELKAGTHVFAVYGDNFFKNVSYTIQVLCAA 288
Query: 181 PFTEEKENLRAVEAEILSKRAELSKFESEYREVLAQFTEMTSRYAQEMQAIDELLKQRNE 240
FT+EKE+LR+VEA+IL+KRAEL+KFE+EYREVL QFT+MTSRYAQEMQ+IDELLKQRNE
Sbjct: 289 AFTQEKEDLRSVEAQILTKRAELAKFETEYREVLVQFTDMTSRYAQEMQSIDELLKQRNE 348
Query: 241 IHASYTTAPPMKRSTSKNRSRGSP----------------------KETKEEGQVRDKKP 278
IH++YTT P MKRS+SKNR R S +E +E + ++KKP
Sbjct: 349 IHSAYTTIPLMKRSSSKNRMRKSSFKKAAAKAPAPTEQEEEEEEEEEEEEESSRQKNKKP 408
Query: 279 TMRDRP----KKKKWFNIHLKADKRNKC 302
+ D+ KK KWFN+HLK DK+ C
Sbjct: 409 STCDKSETLKKKSKWFNLHLKLDKKKPC 436
>sp|Q9ZSY2|DNJ15_ARATH Chaperone protein dnaJ 15 OS=Arabidopsis thaliana GN=ATJ15 PE=1
SV=1
Length = 410
Score = 368 bits (945), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/303 (58%), Positives = 235/303 (77%), Gaps = 4/303 (1%)
Query: 1 MFAALFSKLGVPIKTTVSATVLEEALNGMVTVRPLLLDQHITRKVEKQCAHFYSVTITEE 60
MFAALFSKLGVPIKTTVSA VLEEA+NG VTVRPL + ++ KVEKQCAHF+ VTI+E+
Sbjct: 106 MFAALFSKLGVPIKTTVSANVLEEAMNGTVTVRPLPIGTSVSGKVEKQCAHFFGVTISEQ 165
Query: 61 EARAGFVCRVQSSDKSKFKLLYFDREGTGGLSLALQEDCTKTGKVTSAGMYFLGFPVYRL 120
+A +G V RV S+ +SKFKLLYF+++ +GG LALQE+ KTGKVTSAGMYFL F VYR+
Sbjct: 166 QAESGVVVRVTSTAQSKFKLLYFEQDSSGGYGLALQEEREKTGKVTSAGMYFLHFQVYRM 225
Query: 121 DQTATSMAAAKDPDAAFFKKLDGFQPCEITELKAGTHVFAVYGDNFFKSASYMIEALCAA 180
D T ++AAAKDP++AFFK+L+G QPCE++ELKAGTH+FAVYGDNFFK+ASY IEALCA
Sbjct: 226 DTTVNALAAAKDPESAFFKRLEGLQPCEVSELKAGTHIFAVYGDNFFKTASYTIEALCAK 285
Query: 181 PFTEEKENLRAVEAEILSKRAELSKFESEYREVLAQFTEMTSRYAQEMQAIDELLKQRNE 240
+ + E L+ +EA+IL KR EL +FE+EYR+ LA+F E+T+RY QE Q +DELLKQR+
Sbjct: 286 TYEDTTEKLKEIEAQILRKRNELRQFETEYRKALARFQEVTNRYTQEKQTVDELLKQRDT 345
Query: 241 IHASYTTA--PPMKRSTSKNRSRGSPKETKEEGQVRDKKPTMRDRPK-KKKWFNIHLK-A 296
IH++++ P ++ + S+ E+K +G ++ +R K K+KWFN++LK +
Sbjct: 346 IHSTFSVVKTPSGNNLSNGSSSKAQGDESKGDGDSAGEEGGTENRDKSKRKWFNLNLKGS 405
Query: 297 DKR 299
DK+
Sbjct: 406 DKK 408
>sp|Q6XL73|DNJ39_ARATH Chaperone protein dnaJ 39 OS=Arabidopsis thaliana GN=ATJ39 PE=2
SV=2
Length = 414
Score = 367 bits (942), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/304 (61%), Positives = 231/304 (75%), Gaps = 8/304 (2%)
Query: 1 MFAALFSKLGVPIKTTVSATVLEEALNGMVTVRPLLLDQHITRKVEKQCAHFYSVTITEE 60
+FAALF+KLGV IKTTVSA +L EALNG VT PL++ Q ++RKVEKQ AHFYSVT+TEE
Sbjct: 112 IFAALFNKLGVQIKTTVSANLLGEALNGTVTTLPLMVGQVVSRKVEKQSAHFYSVTLTEE 171
Query: 61 EARAGFVCRVQSSDKSKFKLLYFDREGTGGLSLALQEDCTKTGKVTSAGMYFLGFPVYRL 120
EA+ G +C+V SS K+KFKLLYFD+ GGLSLALQED KTGK+++AG+YF GFPVYR
Sbjct: 172 EAQDGLICKVHSSAKNKFKLLYFDQVENGGLSLALQEDSRKTGKLSTAGLYFFGFPVYRF 231
Query: 121 DQTATSMAAAKDPDAAFFKKLDGFQPCEITELKAGTHVFAVYGDNFFKSASYMIEALCAA 180
D S A ++DP+ FFK+LD FQP EITELKAG+HVFAVYGDNFFKS SY +E +A
Sbjct: 232 DHRVNSRALSRDPETGFFKRLDAFQPFEITELKAGSHVFAVYGDNFFKSVSYTLEIFSSA 291
Query: 181 PFTEEKENLRAVEAEILSKRAELSKFESEYREVLAQFTEMTSRYAQEMQAIDELLKQRNE 240
PF EKE+LR+ EA+I+SKR EL KFE+EY EV AQFTEM S+ E+Q IDELLK+RNE
Sbjct: 292 PFGNEKESLRSTEAQIVSKRTELLKFEAEYHEVFAQFTEMASKCTGEVQEIDELLKRRNE 351
Query: 241 IHASYTTAPPMKRSTSKNRSRGSPK-----ETKEEGQVRDKKPTMRDRPKKKKWFNIHLK 295
I A+YT PP K+ +SK+RS K E +EEG+V ++ KKKKW+NI L+
Sbjct: 352 ICAAYTIFPPTKQGSSKSRSWSKKKSSLLMEPREEGEVAVRE---EGGVKKKKWYNIQLR 408
Query: 296 ADKR 299
DK+
Sbjct: 409 QDKK 412
>sp|Q5M8L3|GKAP1_XENTR G kinase-anchoring protein 1 OS=Xenopus tropicalis GN=gkap1 PE=2
SV=1
Length = 363
Score = 35.0 bits (79), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 62/141 (43%), Gaps = 17/141 (12%)
Query: 121 DQTATSMAAAKDP----DAAFFKKLDGFQPCEITELKAGTHVFAVYGDNFFKSASYMIEA 176
DQ A K P D FF KL+ I + K H V F + Y +E
Sbjct: 188 DQQAKKQEELKSPAMPQDRGFFNKLEEDVTKIILKEKRKEHSSDVT--ESFSTPDYSMEP 245
Query: 177 LCAAPFTEE-KENLRAVEAEILSKRAELSKFESEYREVLA---------QFTEMTSRYAQ 226
TE K+ + EAE+ ++ +S++E++YREV A Q EM + A+
Sbjct: 246 ALKDGKTEVLKQEIEKKEAELKQMKSIISQWEAKYREVKARNSQLLKMLQEGEMKDK-AE 304
Query: 227 EMQAIDELLKQRNEIHASYTT 247
+ +DELL +NE+ TT
Sbjct: 305 ILLQVDELLSIKNELTLQVTT 325
>sp|Q6GNQ4|GKP1A_XENLA G kinase-anchoring protein 1-A OS=Xenopus laevis GN=gkap1-a PE=2
SV=1
Length = 361
Score = 32.7 bits (73), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 13/124 (10%)
Query: 134 DAAFFKKLDGFQPCEITELKAGTHVFAVYGDNFFKSASYMIEALCAAPFTEE-KENLRAV 192
D+ FF KL+ I + K H V F + Y +E + TE K+ +
Sbjct: 203 DSGFFNKLEEDVTKIILKEKRKEHSTDVTEQ--FATPEYSMEPVLKDGRTEVLKQEIEKK 260
Query: 193 EAEILSKRAELSKFESEYREVLA---------QFTEMTSRYAQEMQAIDELLKQRNEIHA 243
E E+ ++ +S++E++YREV A Q EM + A+ + +DELL +NE+
Sbjct: 261 EVELKQMKSIISQWEAKYREVKARNSQLLKMLQEGEMKDK-AEILLQVDELLSIKNELTL 319
Query: 244 SYTT 247
TT
Sbjct: 320 QVTT 323
>sp|P90970|GOGA5_CAEEL Golgin-84 OS=Caenorhabditis elegans GN=T24B1.1 PE=3 SV=2
Length = 530
Score = 31.6 bits (70), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 54/109 (49%), Gaps = 7/109 (6%)
Query: 186 KENLRAVEAEILSKRAELSKFESEYREVLAQFTEMTSRYAQEMQAIDELLKQRNE----- 240
K +L + + ++ + R+++ + E++ R++ +Q ++ + +E Q D + NE
Sbjct: 301 KADLESAQLQVYTLRSDMEELEAQIRDLQSQLSDQKRTHLEEKQTWDSTIGLLNEKVECS 360
Query: 241 -IHASYTTAPPMKRSTSKNRSRGSPKETKEEGQVRDKKPTMRDRPKKKK 288
I +T MKR +++S+ KE + + D + MRD K++
Sbjct: 361 RIENEFTKQE-MKRQGDQHQSKMLEKENELRKTISDLRSRMRDEQTKQE 408
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.130 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,110,391
Number of Sequences: 539616
Number of extensions: 3994371
Number of successful extensions: 14886
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 81
Number of HSP's that attempted gapping in prelim test: 14713
Number of HSP's gapped (non-prelim): 195
length of query: 302
length of database: 191,569,459
effective HSP length: 117
effective length of query: 185
effective length of database: 128,434,387
effective search space: 23760361595
effective search space used: 23760361595
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)