BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022104
(302 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9QWZ1|RAD1_MOUSE Cell cycle checkpoint protein RAD1 OS=Mus musculus GN=Rad1 PE=1
SV=1
Length = 280
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 137/290 (47%), Gaps = 35/290 (12%)
Query: 13 LVCQLDNVQGLVDALSAVRWKRHQDAVIELSEHGIILIVEETGCLQAKVYLQRELFVRYE 72
LV LDNV+ L L A+ ++ H A +++GI + VE C+QA ++Q ++F +
Sbjct: 17 LVASLDNVRNLSTVLKAIHFREH--ATCFATKNGIKVTVENAKCVQANAFIQADVFQEFV 74
Query: 73 YSAQGRPRFGVSLGLFADCLNTFSA---PGHSSLIEIRYPGPDMQLLVKSVDSPDACIYA 129
+ F ++L + DCL+ F + PG + + + Y G L++ ++
Sbjct: 75 IQEES-VTFRINLTILLDCLSIFGSSPTPGTLTALRMCYQGYGHPLML-FLEEGGVVTVC 132
Query: 130 EVRTRIPDMISWDYNFEPAGSTPLTFTVKSAALKEAIDDLEWPGSSIQIKLQPVPPSVSF 189
++ T+ P+ + D++F + + ++S L+EA +L+ G +QI + P P
Sbjct: 133 KITTQEPEE-TLDFDF-CSTNVMNKIILQSEGLREAFSELDMTGDVLQITVSPDKPYFRL 190
Query: 190 KGEGH-GDLQIDFMYYVNTDLLIAFHCDREVSYRYKYKFLRATTSNLP-GCVIKHNRGSK 247
G+ G+ +D Y ++DL+ AFHCD+ RYK L+ +T L C + ++
Sbjct: 191 STFGNAGNSHLD--YPKDSDLVEAFHCDKTQVNRYKLSLLKPSTKALALSCKVSIRTDNR 248
Query: 248 LIIGRGGMLKVQHLVSVARTSNQHPHTDSAGYQQPSQIAYIEFFVKPEED 297
G L +Q+++ + QI ++E++ P+E+
Sbjct: 249 ------GFLSLQYMIR----------------NEDGQICFVEYYCCPDEE 276
>sp|Q5R7X9|RAD1_PONAB Cell cycle checkpoint protein RAD1 OS=Pongo abelii GN=RAD1 PE=2
SV=1
Length = 282
Score = 85.5 bits (210), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 135/290 (46%), Gaps = 35/290 (12%)
Query: 13 LVCQLDNVQGLVDALSAVRWKRHQDAVIELSEHGIILIVEETGCLQAKVYLQRELFVRYE 72
LV LDNV+ L L A+ ++ H A +++GI + VE C+QA ++Q +F ++
Sbjct: 17 LVASLDNVRNLSTILKAIHFREH--ATCFATKNGIKVTVENAKCVQANAFIQAGIFQEFK 74
Query: 73 YSAQGRPRFGVSLGLFADCLNTFSA---PGHSSLIEIRYPGPDMQLLVKSVDSPDACIYA 129
+ F ++L + DCL+ F + PG + + + Y G L++ ++
Sbjct: 75 VQEES-VTFRINLTVLLDCLSIFGSSPMPGTLTALRMCYQGYGYPLML-FLEEGGVVTVC 132
Query: 130 EVRTRIPDMISWDYNFEPAGSTPLTFTVKSAALKEAIDDLEWPGSSIQIKLQPVPPSVSF 189
++ T+ P+ + D++F + + ++S L+EA +L+ +QI + P P
Sbjct: 133 KINTQEPEE-TLDFDF-CSTNVINKIILQSEGLREAFSELDMTSEVLQITMSPDKPYFRL 190
Query: 190 KGEGH-GDLQIDFMYYVNTDLLIAFHCDREVSYRYKYKFLRATTSNLP-GCVIKHNRGSK 247
G+ G +D Y ++DL+ AFHC++ RYK L+ +T L C + ++
Sbjct: 191 STFGNAGSSHLD--YPKDSDLMEAFHCNQTQVNRYKISLLKPSTKALVLSCKVSIRTDNR 248
Query: 248 LIIGRGGMLKVQHLVSVARTSNQHPHTDSAGYQQPSQIAYIEFFVKPEED 297
G L +Q+++ + QI ++E++ P+E+
Sbjct: 249 ------GFLSLQYMIR----------------NEDGQICFVEYYCCPDEE 276
>sp|O60671|RAD1_HUMAN Cell cycle checkpoint protein RAD1 OS=Homo sapiens GN=RAD1 PE=1
SV=1
Length = 282
Score = 85.5 bits (210), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 135/290 (46%), Gaps = 35/290 (12%)
Query: 13 LVCQLDNVQGLVDALSAVRWKRHQDAVIELSEHGIILIVEETGCLQAKVYLQRELFVRYE 72
LV LDNV+ L L A+ ++ H A +++GI + VE C+QA ++Q +F ++
Sbjct: 17 LVASLDNVRNLSTILKAIHFREH--ATCFATKNGIKVTVENAKCVQANAFIQAGIFQEFK 74
Query: 73 YSAQGRPRFGVSLGLFADCLNTFSA---PGHSSLIEIRYPGPDMQLLVKSVDSPDACIYA 129
+ F ++L + DCL+ F + PG + + + Y G L++ ++
Sbjct: 75 VQEES-VTFRINLTVLLDCLSIFGSSPMPGTLTALRMCYQGYGYPLML-FLEEGGVVTVC 132
Query: 130 EVRTRIPDMISWDYNFEPAGSTPLTFTVKSAALKEAIDDLEWPGSSIQIKLQPVPPSVSF 189
++ T+ P+ + D++F + + ++S L+EA +L+ +QI + P P
Sbjct: 133 KINTQEPEE-TLDFDF-CSTNVINKIILQSEGLREAFSELDMTSEVLQITMSPDKPYFRL 190
Query: 190 KGEGH-GDLQIDFMYYVNTDLLIAFHCDREVSYRYKYKFLRATTSNLP-GCVIKHNRGSK 247
G+ G +D Y ++DL+ AFHC++ RYK L+ +T L C + ++
Sbjct: 191 STFGNAGSSHLD--YPKDSDLMEAFHCNQTQVNRYKISLLKPSTKALVLSCKVSIRTDNR 248
Query: 248 LIIGRGGMLKVQHLVSVARTSNQHPHTDSAGYQQPSQIAYIEFFVKPEED 297
G L +Q+++ + QI ++E++ P+E+
Sbjct: 249 ------GFLSLQYMIR----------------NEDGQICFVEYYCCPDEE 276
>sp|P14746|REC1_USTMA DNA repair exonuclease REC1 OS=Ustilago maydis (strain 521 / FGSC
9021) GN=REC1 PE=3 SV=2
Length = 463
Score = 37.0 bits (84), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 13 LVCQLDNVQGLVDALSAVRWKRHQDAVIELSEHGIILIVEETGCLQAKVYLQRELFVRYE 72
L L +V GL + L +V + H AV+ S G+ +I E LQA YL +F Y
Sbjct: 15 LTATLSDVTGLANLLKSVAIQTH--AVVIASSSGLEIITELNRTLQAHAYLYSHMFDSYR 72
Query: 73 Y-SAQGRPRFGVSL 85
+ +AQ R SL
Sbjct: 73 FENAQDDVRGSTSL 86
>sp|Q13164|MK07_HUMAN Mitogen-activated protein kinase 7 OS=Homo sapiens GN=MAPK7 PE=1
SV=2
Length = 816
Score = 35.4 bits (80), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 64/159 (40%), Gaps = 21/159 (13%)
Query: 29 AVRWKRHQDAVIELSEHGIILIVEETGCLQAKVYLQRELFVRYEYSAQ--------GRPR 80
A RW R + ++ L E+ + + GC+ ++ +R+LF Y Q G P
Sbjct: 223 ATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPS 282
Query: 81 FGVSLGLFADCLNTF---SAPGHSSLIEIRYPGPDMQ---LLVKSVD-SPDACIYAEVRT 133
V + A+ + + P E YPG D Q LL + + P A I A
Sbjct: 283 PAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAAL 342
Query: 134 RIPDMISW-DYNFEPAGSTPLTFTVKSAAL-----KEAI 166
R P + + D + EP + P F AL KEAI
Sbjct: 343 RHPFLAKYHDPDDEPDCAPPFDFAFDREALTRERIKEAI 381
>sp|Q9WVS8|MK07_MOUSE Mitogen-activated protein kinase 7 OS=Mus musculus GN=Mapk7 PE=1
SV=1
Length = 806
Score = 35.4 bits (80), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 64/159 (40%), Gaps = 21/159 (13%)
Query: 29 AVRWKRHQDAVIELSEHGIILIVEETGCLQAKVYLQRELFVRYEYSAQ--------GRPR 80
A RW R + ++ L E+ + + GC+ ++ +R+LF Y Q G P
Sbjct: 223 ATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPS 282
Query: 81 FGVSLGLFADCLNTF---SAPGHSSLIEIRYPGPDMQ---LLVKSVD-SPDACIYAEVRT 133
V + A+ + + P E YPG D Q LL + + P A I A
Sbjct: 283 PAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAAL 342
Query: 134 RIPDMISW-DYNFEPAGSTPLTFTVKSAAL-----KEAI 166
R P + + D + EP + P F AL KEAI
Sbjct: 343 RHPFLAKYHDPDDEPDCAPPFDFAFDREALTRERIKEAI 381
>sp|P0C865|MK07_RAT Mitogen-activated protein kinase 7 OS=Rattus norvegicus GN=Mapk7
PE=1 SV=1
Length = 806
Score = 35.0 bits (79), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 64/159 (40%), Gaps = 21/159 (13%)
Query: 29 AVRWKRHQDAVIELSEHGIILIVEETGCLQAKVYLQRELFVRYEYSAQ--------GRPR 80
A RW R + ++ L E+ + + GC+ ++ +R+LF Y Q G P
Sbjct: 223 ATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPS 282
Query: 81 FGVSLGLFADCLNTF---SAPGHSSLIEIRYPGPDMQ---LLVKSVD-SPDACIYAEVRT 133
V + A+ + + P E YPG D Q LL + + P A I A
Sbjct: 283 PAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAAL 342
Query: 134 RIPDMISW-DYNFEPAGSTPLTFTVKSAAL-----KEAI 166
R P + + D + EP + P F AL KEAI
Sbjct: 343 RHPFLAKYHDPDDEPDCAPPFDFAFDREALTRERIKEAI 381
>sp|A5PKJ4|MK07_BOVIN Mitogen-activated protein kinase 7 OS=Bos taurus GN=MAPK7 PE=2 SV=1
Length = 781
Score = 34.7 bits (78), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 64/159 (40%), Gaps = 21/159 (13%)
Query: 29 AVRWKRHQDAVIELSEHGIILIVEETGCLQAKVYLQRELFVRYEYSAQ--------GRPR 80
A RW R + ++ L E+ + + GC+ ++ +R+LF Y Q G P
Sbjct: 223 ATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMTVLGTPS 282
Query: 81 FGVSLGLFADCLNTF---SAPGHSSLIEIRYPGPDMQ---LLVKSVD-SPDACIYAEVRT 133
V + A+ + + P E YPG D Q LL + + P A + A
Sbjct: 283 PAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARVSAAAAL 342
Query: 134 RIPDMISW-DYNFEPAGSTPLTFTVKSAAL-----KEAI 166
R P + + D + EP + P F AL KEAI
Sbjct: 343 RHPFLAKYHDPDDEPDCAPPFDFAFDREALTRERIKEAI 381
>sp|P16892|FUS3_YEAST Mitogen-activated protein kinase FUS3 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=FUS3 PE=1 SV=2
Length = 353
Score = 32.3 bits (72), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%)
Query: 29 AVRWKRHQDAVIELSEHGIILIVEETGCLQAKVYLQRELFVRYEYSAQGRPRFGV 83
A RW R + ++ +++ + V GC+ A+++L+R +F +Y Q FG+
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGI 238
>sp|Q7KQM6|PERQ1_DROME PERQ amino acid-rich with GYF domain-containing protein CG11148
OS=Drosophila melanogaster GN=CG11148 PE=1 SV=2
Length = 1574
Score = 32.0 bits (71), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%)
Query: 19 NVQGLVDALSAVRWKRHQDAVIELSEHGIILIVEETGCLQAKVYLQRELFVRYEYSAQGR 78
N G L +R++ QD I+ E+ I+ + + C Q +++E VR + G
Sbjct: 705 NSIGNTSHLLTMRFQMLQDQYIQHQEYQILAELSKNECFQRLSAVEQETVVRRKVQLLGL 764
Query: 79 PRFGVSLGLFADCLNTFS 96
P + +SL ++ L+ +
Sbjct: 765 PEYLISLNGLSNSLSVLN 782
>sp|P27638|SPK1_SCHPO Mitogen-activated protein kinase spk1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=spk1 PE=2 SV=1
Length = 372
Score = 32.0 bits (71), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 22 GLVDALSAVRWKRHQDAVIELSEHGIILIVEETGCLQAKVYLQRELFVRYEYSAQ 76
G + A RW R + ++ E+ + + TGC+ A++ R LF +Y +Q
Sbjct: 196 GFMTEYVATRWYRAPEIMLSFREYSKAIDLWSTGCILAEMLSARPLFPGKDYHSQ 250
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 114,814,570
Number of Sequences: 539616
Number of extensions: 4744185
Number of successful extensions: 8874
Number of sequences better than 100.0: 11
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 8864
Number of HSP's gapped (non-prelim): 11
length of query: 302
length of database: 191,569,459
effective HSP length: 117
effective length of query: 185
effective length of database: 128,434,387
effective search space: 23760361595
effective search space used: 23760361595
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)