Query 022109
Match_columns 302
No_of_seqs 188 out of 1284
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 08:06:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022109.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022109hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03156 GDSL esterase/lipase; 100.0 9.3E-70 2E-74 507.0 27.3 269 32-301 24-349 (351)
2 cd01837 SGNH_plant_lipase_like 100.0 2.3E-64 5E-69 465.9 25.3 259 36-297 1-314 (315)
3 cd01847 Triacylglycerol_lipase 100.0 1.1E-53 2.3E-58 388.8 19.0 231 35-297 1-280 (281)
4 PRK15381 pathogenicity island 100.0 1.6E-53 3.4E-58 400.6 20.3 231 32-297 139-400 (408)
5 cd01846 fatty_acyltransferase_ 100.0 3.9E-49 8.4E-54 356.3 20.6 227 37-296 1-269 (270)
6 COG3240 Phospholipase/lecithin 100.0 1.3E-37 2.9E-42 282.8 18.4 249 30-298 24-333 (370)
7 PF00657 Lipase_GDSL: GDSL-lik 99.8 4.9E-21 1.1E-25 167.3 10.3 188 38-294 1-234 (234)
8 cd01832 SGNH_hydrolase_like_1 98.8 3.1E-08 6.6E-13 83.9 9.0 165 37-296 1-184 (185)
9 cd01839 SGNH_arylesterase_like 98.7 1E-07 2.2E-12 82.6 10.6 100 142-299 101-206 (208)
10 cd01844 SGNH_hydrolase_like_6 98.6 4.1E-07 8.8E-12 76.8 11.9 22 275-296 154-175 (177)
11 cd01823 SEST_like SEST_like. A 98.6 9.3E-07 2E-11 79.1 14.5 127 141-296 126-258 (259)
12 cd01836 FeeA_FeeB_like SGNH_hy 98.6 2E-07 4.3E-12 79.4 9.0 102 142-298 87-189 (191)
13 cd04501 SGNH_hydrolase_like_4 98.6 4E-07 8.7E-12 77.0 10.2 104 142-297 79-182 (183)
14 cd01838 Isoamyl_acetate_hydrol 98.5 4.2E-07 9.1E-12 77.4 8.9 110 141-297 87-198 (199)
15 cd01830 XynE_like SGNH_hydrola 98.5 6.2E-07 1.4E-11 77.5 9.1 24 272-295 178-201 (204)
16 cd01821 Rhamnogalacturan_acety 98.5 1.3E-06 2.8E-11 75.0 10.6 108 141-297 89-197 (198)
17 PRK10528 multifunctional acyl- 98.5 8.6E-07 1.9E-11 76.0 9.1 29 273-301 158-186 (191)
18 cd01827 sialate_O-acetylestera 98.4 4.8E-06 1E-10 70.6 13.0 22 276-297 165-186 (188)
19 cd01822 Lysophospholipase_L1_l 98.3 4.9E-06 1.1E-10 69.6 9.6 24 274-297 152-175 (177)
20 cd01831 Endoglucanase_E_like E 98.3 1.7E-05 3.8E-10 66.3 12.6 22 276-297 146-167 (169)
21 cd01835 SGNH_hydrolase_like_3 98.2 8.9E-06 1.9E-10 69.4 9.7 97 142-296 95-191 (193)
22 cd01824 Phospholipase_B_like P 98.1 0.00011 2.5E-09 67.1 15.3 127 141-300 144-285 (288)
23 cd01825 SGNH_hydrolase_peri1 S 98.1 1.9E-05 4.1E-10 66.8 8.9 109 141-298 76-185 (189)
24 cd01834 SGNH_hydrolase_like_2 98.0 8.7E-05 1.9E-09 62.6 11.0 105 143-297 86-191 (191)
25 cd00229 SGNH_hydrolase SGNH_hy 97.9 7.4E-05 1.6E-09 61.1 9.7 88 153-296 98-186 (187)
26 cd01833 XynB_like SGNH_hydrola 97.9 7.8E-05 1.7E-09 61.3 9.2 95 143-297 61-156 (157)
27 cd01841 NnaC_like NnaC (CMP-Ne 97.9 8.5E-05 1.8E-09 62.1 9.1 101 142-296 71-172 (174)
28 cd01828 sialate_O-acetylestera 97.8 0.00017 3.7E-09 60.0 9.1 98 142-297 68-167 (169)
29 cd01829 SGNH_hydrolase_peri2 S 97.8 0.00025 5.4E-09 60.6 10.2 109 141-298 90-198 (200)
30 cd04506 SGNH_hydrolase_YpmR_li 97.7 0.0006 1.3E-08 58.5 11.4 102 141-296 101-203 (204)
31 cd01820 PAF_acetylesterase_lik 97.6 0.00032 6.9E-09 61.0 9.3 27 275-301 187-213 (214)
32 PF13472 Lipase_GDSL_2: GDSL-l 97.5 0.00049 1.1E-08 56.6 8.6 98 139-290 82-179 (179)
33 cd04502 SGNH_hydrolase_like_7 97.4 0.0016 3.5E-08 54.3 10.4 24 273-296 146-169 (171)
34 PF14606 Lipase_GDSL_3: GDSL-l 97.4 0.00046 1E-08 58.4 6.4 163 36-296 2-175 (178)
35 cd01840 SGNH_hydrolase_yrhL_li 97.2 0.0019 4.1E-08 53.0 7.7 24 274-297 126-149 (150)
36 cd01826 acyloxyacyl_hydrolase_ 96.8 0.014 3E-07 53.4 10.6 125 141-296 148-304 (305)
37 COG2755 TesA Lysophospholipase 96.4 0.042 9.2E-07 47.4 10.7 23 277-299 187-209 (216)
38 KOG3035 Isoamyl acetate-hydrol 96.0 0.025 5.5E-07 48.9 6.9 117 133-298 91-208 (245)
39 cd01842 SGNH_hydrolase_like_5 90.5 2.6 5.6E-05 35.7 9.0 106 140-296 70-180 (183)
40 PF07172 GRP: Glycine rich pro 78.2 1.5 3.3E-05 33.2 1.9 19 5-24 1-19 (95)
41 PF02633 Creatininase: Creatin 65.5 21 0.00045 31.4 6.5 69 134-231 76-144 (237)
42 PLN02757 sirohydrochlorine fer 64.9 14 0.00031 30.4 4.9 58 153-233 65-125 (154)
43 KOG4079 Putative mitochondrial 60.5 4.7 0.0001 32.4 1.2 16 157-172 42-57 (169)
44 PF01903 CbiX: CbiX; InterPro 56.4 16 0.00034 27.5 3.6 49 153-224 44-92 (105)
45 COG2845 Uncharacterized protei 51.9 64 0.0014 30.1 7.1 26 273-298 292-317 (354)
46 cd03416 CbiX_SirB_N Sirohydroc 50.6 22 0.00048 26.5 3.6 48 153-223 51-98 (101)
47 PF04914 DltD_C: DltD C-termin 46.8 47 0.001 26.6 4.9 73 203-296 38-125 (130)
48 cd00384 ALAD_PBGS Porphobilino 42.9 48 0.001 30.6 5.0 48 153-217 58-105 (314)
49 PRK13384 delta-aminolevulinic 42.2 60 0.0013 30.0 5.5 54 153-224 68-121 (322)
50 PRK13717 conjugal transfer pro 41.1 62 0.0013 25.8 4.7 26 189-214 70-95 (128)
51 cd04824 eu_ALAD_PBGS_cysteine_ 39.2 71 0.0015 29.6 5.4 50 153-217 58-108 (320)
52 PF08885 GSCFA: GSCFA family; 39.2 1.8E+02 0.004 26.0 8.1 82 135-232 145-226 (251)
53 PRK09283 delta-aminolevulinic 38.7 77 0.0017 29.4 5.6 54 153-224 66-119 (323)
54 cd04823 ALAD_PBGS_aspartate_ri 37.2 77 0.0017 29.4 5.4 56 153-224 61-116 (320)
55 COG3581 Uncharacterized protei 35.8 62 0.0014 30.9 4.6 48 153-225 326-373 (420)
56 PF00490 ALAD: Delta-aminolevu 34.7 96 0.0021 28.8 5.6 56 153-224 64-119 (324)
57 KOG3670 Phospholipase [Lipid t 32.4 38 0.00083 32.2 2.7 30 271-300 323-352 (397)
58 PF08331 DUF1730: Domain of un 32.2 1E+02 0.0022 22.1 4.4 66 157-223 8-77 (78)
59 TIGR02744 TrbI_Ftype type-F co 32.0 1.1E+02 0.0023 23.9 4.7 26 189-214 57-82 (112)
60 PF09677 TrbI_Ftype: Type-F co 25.7 1.5E+02 0.0033 23.0 4.6 25 190-214 57-81 (111)
61 cd03414 CbiX_SirB_C Sirohydroc 25.3 1.8E+02 0.004 22.0 5.1 45 153-222 52-96 (117)
62 PF08282 Hydrolase_3: haloacid 24.7 29 0.00062 29.7 0.4 16 35-50 202-217 (254)
63 COG0113 HemB Delta-aminolevuli 24.4 79 0.0017 29.2 3.1 50 153-217 68-117 (330)
64 PRK03669 mannosyl-3-phosphogly 23.7 40 0.00088 30.0 1.2 18 34-51 205-222 (271)
65 COG1209 RfbA dTDP-glucose pyro 22.2 2.6E+02 0.0056 25.5 5.9 82 153-244 39-148 (286)
66 TIGR01486 HAD-SF-IIB-MPGP mann 21.5 49 0.0011 29.2 1.3 18 35-52 194-211 (256)
67 PF06812 ImpA-rel_N: ImpA-rela 21.0 35 0.00075 23.3 0.2 8 276-283 53-60 (62)
68 PF11131 PhrC_PhrF: Rap-phr ex 21.0 1E+02 0.0023 18.8 2.2 20 9-28 2-22 (37)
69 PRK03437 3-isopropylmalate deh 20.6 1.2E+02 0.0026 28.6 3.7 36 204-239 198-233 (344)
70 TIGR02463 MPGP_rel mannosyl-3- 20.1 45 0.00098 28.5 0.7 17 34-50 194-210 (221)
No 1
>PLN03156 GDSL esterase/lipase; Provisional
Probab=100.00 E-value=9.3e-70 Score=506.98 Aligned_cols=269 Identities=46% Similarity=0.835 Sum_probs=234.5
Q ss_pred CCCCCEEEEcCCCcccCCCCCccchhccCCCCCCCCCCCCCCCccccCCCchHHHHHHhhcCCCCCCCCcCCCCcCCCcc
Q 022109 32 APLVPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNL 111 (302)
Q Consensus 32 ~~~~~~l~vFGDSlsD~Gn~~~~~~~~~~~~~Pyg~~~p~~~~~grfSnG~~~~d~la~~lg~~~~~p~~l~~~~~~~~~ 111 (302)
...+++|||||||++|+||++++.+..+++.||||++||++.|+||||||++|+||||+.||+++.+|||+.+..++.++
T Consensus 24 ~~~~~aifvFGDSl~D~GN~~~l~~~~~~~~~pyG~~f~~~~ptGRfSnGr~~~D~iA~~lGl~p~~ppyl~~~~~~~~~ 103 (351)
T PLN03156 24 CAKVPAIIVFGDSSVDAGNNNQISTVAKSNFEPYGRDFPGGRPTGRFCNGRIAPDFISEAFGLKPAIPAYLDPSYNISDF 103 (351)
T ss_pred cCCCCEEEEecCcCccCCCccccccccccCCCCCCCCCCCCCCCccccCCChhhhhHHHHhCCCCCCCCCcCcccCchhh
Confidence 45699999999999999999877665577899999999986799999999999999999999955899999876556688
Q ss_pred cCcceEEEeeccCCCCCCCccccccHHHHHHHHHHHHHHHH---------------------------------------
Q 022109 112 LIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLA--------------------------------------- 152 (302)
Q Consensus 112 ~~G~NfA~gGA~~~~~~~~~~~~~~l~~Qv~~f~~~~~~l~--------------------------------------- 152 (302)
..|+|||+||+++++.++.....+++..||++|..+++++.
T Consensus 104 ~~GvNFA~agag~~~~~~~~~~~~~l~~Qv~~F~~~~~~l~~~~g~~~~~~~~~~sL~~i~iG~NDy~~~~~~~~~~~~~ 183 (351)
T PLN03156 104 ATGVCFASAGTGYDNATSDVLSVIPLWKELEYYKEYQTKLRAYLGEEKANEIISEALYLISIGTNDFLENYYTFPGRRSQ 183 (351)
T ss_pred cccceeecCCccccCCCccccCccCHHHHHHHHHHHHHHHHHhhChHHHHHHHhcCeEEEEecchhHHHHhhcccccccc
Confidence 99999999999988766432345789999999865432110
Q ss_pred ------------------HHHHhcCCceeEEeccCCCCCchhhhhccCCCCCchhHHHHHHHHHHhHHHHHHHHHHHhhC
Q 022109 153 ------------------KNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQL 214 (302)
Q Consensus 153 ------------------~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~ 214 (302)
++||++|||||+|+|+||+||+|..+........+|.+.+|.+++.||++|++++++|++++
T Consensus 184 ~~~~~~~~~lv~~~~~~i~~Ly~~GAR~~~V~~lpplGc~P~~~~~~~~~~~~C~~~~n~~~~~~N~~L~~~l~~L~~~~ 263 (351)
T PLN03156 184 YTVSQYQDFLIGIAENFVKKLYRLGARKISLGGLPPMGCLPLERTTNLMGGSECVEEYNDVALEFNGKLEKLVTKLNKEL 263 (351)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 89999999999999999999999976543222458999999999999999999999999999
Q ss_pred CCceEEEeeccHHHHHHHhCcccCCCcccCccccCCccccccccccCCCCCCCCCCCCCceeeCCCChhHHHHHHHHHHH
Q 022109 215 PDLKIVIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPGTCSNASQYVFWDSVHPSQAANQVIADEL 294 (302)
Q Consensus 215 ~~~~i~~~D~~~~~~~v~~nP~~yGf~~~~~~Cc~~g~~~~~~~~c~~~~~~~C~~p~~ylfwD~vHPT~~~h~~iA~~~ 294 (302)
|+++|+++|+|.+++++++||++|||++++++||+.|.++ ....|+.....+|.+|++|+|||++|||+++|+++|+.+
T Consensus 264 pg~~i~~~D~y~~~~~ii~nP~~yGf~~~~~aCCg~g~~~-~~~~C~~~~~~~C~~p~~yvfWD~~HPTe~a~~~iA~~~ 342 (351)
T PLN03156 264 PGIKLVFSNPYDIFMQIIRNPSAYGFEVTSVACCATGMFE-MGYLCNRNNPFTCSDADKYVFWDSFHPTEKTNQIIANHV 342 (351)
T ss_pred CCCeEEEEehHHHHHHHHhCccccCcccCCccccCCCCCC-CccccCCCCCCccCCccceEEecCCCchHHHHHHHHHHH
Confidence 9999999999999999999999999999999999988777 677898765348999999999999999999999999999
Q ss_pred HHhccCC
Q 022109 295 IVQGFAL 301 (302)
Q Consensus 295 ~~~~~~~ 301 (302)
+++..++
T Consensus 343 ~~~l~~~ 349 (351)
T PLN03156 343 VKTLLSK 349 (351)
T ss_pred HHHHHHh
Confidence 9876554
No 2
>cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=100.00 E-value=2.3e-64 Score=465.93 Aligned_cols=259 Identities=51% Similarity=0.948 Sum_probs=224.0
Q ss_pred CEEEEcCCCcccCCCCCccchhccCCCCCCCCCCCCCCCccccCCCchHHHHHHhhcCCCCCCCCcCCCCcCCCcccCcc
Q 022109 36 PAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGA 115 (302)
Q Consensus 36 ~~l~vFGDSlsD~Gn~~~~~~~~~~~~~Pyg~~~p~~~~~grfSnG~~~~d~la~~lg~~~~~p~~l~~~~~~~~~~~G~ 115 (302)
++||+||||++|+||+.++.+..+++.||||++||++ |+||||||++|+||||+.||++...|+|+.... +.++..|+
T Consensus 1 ~al~vFGDS~sD~Gn~~~~~~~~~~~~~PyG~~~~~~-p~GRfSnG~~~~d~la~~lgl~~~~p~~~~~~~-~~~~~~G~ 78 (315)
T cd01837 1 PALFVFGDSLVDTGNNNYLPTLAKANFPPYGIDFPGR-PTGRFSNGRLIIDFIAEALGLPLLPPPYLSPNG-SSDFLTGV 78 (315)
T ss_pred CcEEEecCccccCCCccccccccccCCCCCcCcCCCC-CCccccCCchhhhhhhhhccCCCCCCCccCccc-cchhhccc
Confidence 4699999999999999776554446789999999985 999999999999999999999955788876432 24678899
Q ss_pred eEEEeeccCCCCCCCccccccHHHHHHHHHHHHHHH------------H-------------------------------
Q 022109 116 NFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKL------------A------------------------------- 152 (302)
Q Consensus 116 NfA~gGA~~~~~~~~~~~~~~l~~Qv~~f~~~~~~l------------~------------------------------- 152 (302)
|||+|||++.+.+......+++..||++|+++++++ .
T Consensus 79 NfA~gGA~~~~~~~~~~~~~~l~~Qv~~F~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~ 158 (315)
T cd01837 79 NFASGGAGILDSTGFLGSVISLSVQLEYFKEYKERLRALVGEEAAADILSKSLFLISIGSNDYLNNYFANPTRQYEVEAY 158 (315)
T ss_pred eecccCCccccCCcceeeeecHHHHHHHHHHHHHHHHHhhCHHHHHHHHhCCEEEEEecccccHHHHhcCccccCCHHHH
Confidence 999999999876543335689999999998765311 0
Q ss_pred ------------HHHHhcCCceeEEeccCCCCCchhhhhccCCCCCchhHHHHHHHHHHhHHHHHHHHHHHhhCCCceEE
Q 022109 153 ------------KNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIV 220 (302)
Q Consensus 153 ------------~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~ 220 (302)
++|+++|||+|+|+|+||+||+|.++........+|.+.++++++.||++|+++|++|++++|+++|+
T Consensus 159 ~~~~v~~i~~~v~~L~~~GAr~~~v~~lpplgc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~ 238 (315)
T cd01837 159 VPFLVSNISSAIKRLYDLGARKFVVPGLGPLGCLPSQRTLFGGDGGGCLEELNELARLFNAKLKKLLAELRRELPGAKFV 238 (315)
T ss_pred HHHHHHHHHHHHHHHHhCCCcEEEecCCCCcCccHHHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 89999999999999999999999988754223468999999999999999999999999999999999
Q ss_pred EeeccHHHHHHHhCcccCCCcccCccccCCccccccccccCCCCCCCCCCCCCceeeCCCChhHHHHHHHHHHHHHh
Q 022109 221 IFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPGTCSNASQYVFWDSVHPSQAANQVIADELIVQ 297 (302)
Q Consensus 221 ~~D~~~~~~~v~~nP~~yGf~~~~~~Cc~~g~~~~~~~~c~~~~~~~C~~p~~ylfwD~vHPT~~~h~~iA~~~~~~ 297 (302)
++|+|.+++++++||++|||++++++||+.|..+ ....|......+|.+|++|+|||++|||+++|++||+.++++
T Consensus 239 ~~D~y~~~~~i~~np~~yGf~~~~~aCc~~g~~~-~~~~c~~~~~~~C~~p~~y~fwD~~HpT~~~~~~ia~~~~~g 314 (315)
T cd01837 239 YADIYNALLDLIQNPAKYGFENTLKACCGTGGPE-GGLLCNPCGSTVCPDPSKYVFWDGVHPTEAANRIIADALLSG 314 (315)
T ss_pred EEehhHHHHHHHhChhhcCCcCCCcCccCCCCCC-cccccCCCCCCcCCCccceEEeCCCChHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999987655 556787654458999999999999999999999999999876
No 3
>cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Members of this subfamily might hydrolyze triacylglycerol into diacylglycerol and fatty acid anions.
Probab=100.00 E-value=1.1e-53 Score=388.76 Aligned_cols=231 Identities=23% Similarity=0.315 Sum_probs=190.6
Q ss_pred CCEEEEcCCCcccCCCCCccchhccCCCCCCCCCCCCCCCccccCCCchHHHHHHhhcCCCCCCCCcCCCCcCCCcccCc
Q 022109 35 VPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIG 114 (302)
Q Consensus 35 ~~~l~vFGDSlsD~Gn~~~~~~~~~~~~~Pyg~~~p~~~~~grfSnG~~~~d~la~~lg~~~~~p~~l~~~~~~~~~~~G 114 (302)
|++||||||||+|+||++++. ++ .+|+||||||++.+|++++.+|++. . ++ ....+...|
T Consensus 1 ~~~i~vFGDSl~D~Gn~~~~~--------~~------~~~~gRFsnG~~~~d~~~~~~~~~~-~---~~--~~~~~~~~G 60 (281)
T cd01847 1 FSRVVVFGDSLSDVGTYNRAG--------VG------AAGGGRFTVNDGSIWSLGVAEGYGL-T---TG--TATPTTPGG 60 (281)
T ss_pred CCceEEecCcccccCCCCccc--------cC------CCCCcceecCCcchHHHHHHHHcCC-C---cC--cCcccCCCC
Confidence 679999999999999987552 11 1278999999999999999999872 2 22 123457889
Q ss_pred ceEEEeeccCCCCCCCc---cccccHHHHHHHHHHHHHHH----------------------------------------
Q 022109 115 ANFASAGSGYDDRTSYL---NHAISLTQQLQYYREYQSKL---------------------------------------- 151 (302)
Q Consensus 115 ~NfA~gGA~~~~~~~~~---~~~~~l~~Qv~~f~~~~~~l---------------------------------------- 151 (302)
+|||+|||++.+.+... ...+++.+||++|++.+.++
T Consensus 61 ~NfA~gGa~~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (281)
T cd01847 61 TNYAQGGARVGDTNNGNGAGAVLPSVTTQIANYLAAGGGFDPNALYTVWIGGNDLIAALAALTTATTTQAAAVAAAATAA 140 (281)
T ss_pred ceeeccCccccCCCCccccccCCCCHHHHHHHHHHhcCCCCCCeEEEEecChhHHHHHHhhccccccchhhHHHHHHHHH
Confidence 99999999998754321 23578999999998653210
Q ss_pred ------HHHHHhcCCceeEEeccCCCCCchhhhhccCCCCCchhHHHHHHHHHHhHHHHHHHHHHHhhCCCceEEEeecc
Q 022109 152 ------AKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIF 225 (302)
Q Consensus 152 ------~~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~ 225 (302)
.++|+++|||+|+|+++||+||+|.++... ..|.+.++++++.||++|+++|++|+++ +|+++|+|
T Consensus 141 ~~~~~~v~~L~~~GAr~ilv~~lpplgc~P~~~~~~----~~~~~~~n~~~~~~N~~L~~~l~~l~~~----~i~~~D~~ 212 (281)
T cd01847 141 ADLASQVKNLLDAGARYILVPNLPDVSYTPEAAGTP----AAAAALASALSQTYNQTLQSGLNQLGAN----NIIYVDTA 212 (281)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCCCcccCcchhhcc----chhHHHHHHHHHHHHHHHHHHHHhccCC----eEEEEEHH
Confidence 089999999999999999999999987652 3688899999999999999999998764 89999999
Q ss_pred HHHHHHHhCcccCCCcccCccccCCccccccccccCCCCCCCCCCCCCceeeCCCChhHHHHHHHHHHHHHh
Q 022109 226 KPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPGTCSNASQYVFWDSVHPSQAANQVIADELIVQ 297 (302)
Q Consensus 226 ~~~~~v~~nP~~yGf~~~~~~Cc~~g~~~~~~~~c~~~~~~~C~~p~~ylfwD~vHPT~~~h~~iA~~~~~~ 297 (302)
.+++++++||++|||++++++||+.+... .|+.....+|.+|++|+|||++||||++|++||+.+++.
T Consensus 213 ~~~~~i~~nP~~yGf~~~~~~CC~~~~~~----~~~~~~~~~c~~~~~y~fwD~~HpTe~~~~~ia~~~~~~ 280 (281)
T cd01847 213 TLLKEVVANPAAYGFTNTTTPACTSTSAA----GSGAATLVTAAAQSTYLFADDVHPTPAGHKLIAQYALSR 280 (281)
T ss_pred HHHHHHHhChHhcCccCCCccccCCCCcc----ccccccccCCCCccceeeccCCCCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999865422 354444357999999999999999999999999999864
No 4
>PRK15381 pathogenicity island 2 effector protein SseJ; Provisional
Probab=100.00 E-value=1.6e-53 Score=400.62 Aligned_cols=231 Identities=23% Similarity=0.344 Sum_probs=189.9
Q ss_pred CCCCCEEEEcCCCcccCCCCCccchhccCCCCCCCCCCCCCCCccccCCCchHHHHHHhhcCCCCCCCCcCCCCcCCCcc
Q 022109 32 APLVPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNL 111 (302)
Q Consensus 32 ~~~~~~l~vFGDSlsD~Gn~~~~~~~~~~~~~Pyg~~~p~~~~~grfSnG~~~~d~la~~lg~~~~~p~~l~~~~~~~~~ 111 (302)
...|++||+|||||||+||+.+..+. ...||||.+| +||||||++|+|||| .|||++
T Consensus 139 ~~~~~ai~vFGDSlsDtGnn~y~~t~--~~~PPyG~~f-----tGRFSNG~v~~DfLA--------~~pyl~-------- 195 (408)
T PRK15381 139 LGDITRLVFFGDSLSDSLGRMFEKTH--HILPSYGQYF-----GGRFTNGFTWTEFLS--------SPHFLG-------- 195 (408)
T ss_pred cCCCCeEEEeCCccccCCCccccccc--cCCCCCCCCC-----CcccCCCchhhheec--------cccccC--------
Confidence 36899999999999999887665443 4579999875 799999999999998 245664
Q ss_pred cCcceEEEeeccCCCCCCC---ccccccHHHHHHHHHHHHH---------------------HH-------HHHHHhcCC
Q 022109 112 LIGANFASAGSGYDDRTSY---LNHAISLTQQLQYYREYQS---------------------KL-------AKNMYGLGA 160 (302)
Q Consensus 112 ~~G~NfA~gGA~~~~~~~~---~~~~~~l~~Qv~~f~~~~~---------------------~l-------~~~L~~~Ga 160 (302)
..|+|||+|||++...... ....+++.+||++|+...+ .+ .++||++||
T Consensus 196 ~~G~NFA~GGA~~~t~~~~~~~~~~~~~L~~Qv~~~~~~~~aL~lV~iG~NDy~~~~~~~v~~vV~~~~~~l~~Ly~lGA 275 (408)
T PRK15381 196 KEMLNFAEGGSTSASYSCFNCIGDFVSNTDRQVASYTPSHQDLAIFLLGANDYMTLHKDNVIMVVEQQIDDIEKIISGGV 275 (408)
T ss_pred CCCceEeecccccccccccccccCccCCHHHHHHHHHhcCCcEEEEEeccchHHHhHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 1689999999998732111 0124689999998764211 11 189999999
Q ss_pred ceeEEeccCCCCCchhhhhccCCCCCchhHHHHHHHHHHhHHHHHHHHHHHhhCCCceEEEeeccHHHHHHHhCcccCCC
Q 022109 161 RKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPSKSGF 240 (302)
Q Consensus 161 r~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~v~~nP~~yGf 240 (302)
|+|+|+|+||+||+|..+.. ...+.+|.++..||++|+++|++|++++|+++|+++|+|.++.++++||++|||
T Consensus 276 Rk~vV~nlpPlGC~P~~~~~------~~~~~~N~~a~~fN~~L~~~L~~L~~~~pg~~ivy~D~y~~~~~ii~nP~~yGF 349 (408)
T PRK15381 276 NNVLVMGIPDLSLTPYGKHS------DEKRKLKDESIAHNALLKTNVEELKEKYPQHKICYYETADAFKVIMEAASNIGY 349 (408)
T ss_pred cEEEEeCCCCCCCcchhhcc------CchHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEhHHHHHHHHhCHHhcCC
Confidence 99999999999999987642 124789999999999999999999999999999999999999999999999999
Q ss_pred cccCccccCCccccccccccCCCCCCCCCCCCCceeeCCCChhHHHHHHHHHHHHHh
Q 022109 241 VEATRGCCGTGTVETTVFLCNPKSPGTCSNASQYVFWDSVHPSQAANQVIADELIVQ 297 (302)
Q Consensus 241 ~~~~~~Cc~~g~~~~~~~~c~~~~~~~C~~p~~ylfwD~vHPT~~~h~~iA~~~~~~ 297 (302)
++++. ||+.|..+ ....|.+... +|. +|+|||.+|||+++|+++|+++-+-
T Consensus 350 ~~~~~-cCg~G~~~-~~~~C~p~~~-~C~---~YvFWD~vHPTe~ah~iiA~~~~~~ 400 (408)
T PRK15381 350 DTENP-YTHHGYVH-VPGAKDPQLD-ICP---QYVFNDLVHPTQEVHHCFAIMLESF 400 (408)
T ss_pred Ccccc-ccCCCccC-CccccCcccC-CCC---ceEecCCCCChHHHHHHHHHHHHHH
Confidence 99987 99988655 4566876543 784 9999999999999999999987653
No 5
>cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols.
Probab=100.00 E-value=3.9e-49 Score=356.31 Aligned_cols=227 Identities=30% Similarity=0.514 Sum_probs=187.0
Q ss_pred EEEEcCCCcccCCCCCccchhccCCCCCCCCCCCCCCCccccCCCchHHHHHHhhcCCCCCCCCcCCCCcCCCcccCcce
Q 022109 37 AIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGAN 116 (302)
Q Consensus 37 ~l~vFGDSlsD~Gn~~~~~~~~~~~~~Pyg~~~p~~~~~grfSnG~~~~d~la~~lg~~~~~p~~l~~~~~~~~~~~G~N 116 (302)
+||+|||||||+||..++... ..+|.+..| |.||||||++|+|+||+.+|++. ...|+|
T Consensus 1 ~l~vFGDS~sD~Gn~~~~~~~---~~~~~~~~~----~~grfsnG~~w~d~la~~lg~~~--------------~~~~~N 59 (270)
T cd01846 1 RLVVFGDSLSDTGNIFKLTGG---SNPPPSPPY----FGGRFSNGPVWVEYLAATLGLSG--------------LKQGYN 59 (270)
T ss_pred CeEEeeCccccCCcchhhcCC---CCCCCCCCC----CCCccCCchhHHHHHHHHhCCCc--------------cCCcce
Confidence 589999999999998654321 122333233 78999999999999999999861 245799
Q ss_pred EEEeeccCCCCCC--CccccccHHHHHHHHHHHHH------HH----------------------------------HHH
Q 022109 117 FASAGSGYDDRTS--YLNHAISLTQQLQYYREYQS------KL----------------------------------AKN 154 (302)
Q Consensus 117 fA~gGA~~~~~~~--~~~~~~~l~~Qv~~f~~~~~------~l----------------------------------~~~ 154 (302)
||+|||++.+... ......++..||++|++.++ .+ .++
T Consensus 60 ~A~~Ga~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~~l~~i~~G~ND~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 139 (270)
T cd01846 60 YAVGGATAGAYNVPPYPPTLPGLSDQVAAFLAAHKLRLPPDTLVAIWIGANDLLNALDLPQNPDTLVTRAVDNLFQALQR 139 (270)
T ss_pred eEecccccCCcccCCCCCCCCCHHHHHHHHHHhccCCCCCCcEEEEEeccchhhhhccccccccccHHHHHHHHHHHHHH
Confidence 9999999876542 12335689999999876643 00 188
Q ss_pred HHhcCCceeEEeccCCCCCchhhhhccCCCCCchhHHHHHHHHHHhHHHHHHHHHHHhhCCCceEEEeeccHHHHHHHhC
Q 022109 155 MYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQS 234 (302)
Q Consensus 155 L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~v~~n 234 (302)
|+++|+|+|+|+++||++|+|.++..... ..+.++.+++.||++|++++++|++++|+++|+++|+|.++.++++|
T Consensus 140 l~~~g~~~i~v~~~p~~~~~P~~~~~~~~----~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~~~~ 215 (270)
T cd01846 140 LYAAGARNFLVLNLPDLGLTPAFQAQGDA----VAARATALTAAYNAKLAEKLAELKAQHPGVNILLFDTNALFNDILDN 215 (270)
T ss_pred HHHCCCCEEEEeCCCCCCCCcccccCCcc----cHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEhHHHHHHHHhC
Confidence 99999999999999999999998765321 12689999999999999999999999999999999999999999999
Q ss_pred cccCCCcccCccccCCccccccccccCCCCCCCCCCCCCceeeCCCChhHHHHHHHHHHHHH
Q 022109 235 PSKSGFVEATRGCCGTGTVETTVFLCNPKSPGTCSNASQYVFWDSVHPSQAANQVIADELIV 296 (302)
Q Consensus 235 P~~yGf~~~~~~Cc~~g~~~~~~~~c~~~~~~~C~~p~~ylfwD~vHPT~~~h~~iA~~~~~ 296 (302)
|++|||+++..+||+.+ .|.... ..|.+|++|+|||++|||+++|++||+++++
T Consensus 216 p~~yGf~~~~~~C~~~~-------~~~~~~-~~c~~~~~y~fwD~~HpT~~~~~~iA~~~~~ 269 (270)
T cd01846 216 PAAYGFTNVTDPCLDYV-------YSYSPR-EACANPDKYLFWDEVHPTTAVHQLIAEEVAA 269 (270)
T ss_pred HHhcCCCcCcchhcCCC-------cccccc-CCCCCccceEEecCCCccHHHHHHHHHHHHh
Confidence 99999999999999853 154333 4899999999999999999999999999986
No 6
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
Probab=100.00 E-value=1.3e-37 Score=282.75 Aligned_cols=249 Identities=23% Similarity=0.354 Sum_probs=182.9
Q ss_pred cCCCCCCEEEEcCCCcccCCCCCccchhccCCCC-CCCCCCCCCCCccccC--CCchHHHHHHhhcCCCCCCCCcC----
Q 022109 30 DAAPLVPAIITFGDSAVDVGNNNYLATLFKANYP-PYGRDFINHQPTGRFC--NGKLATDFTADTLGFKTYAPAYL---- 102 (302)
Q Consensus 30 ~~~~~~~~l~vFGDSlsD~Gn~~~~~~~~~~~~~-Pyg~~~p~~~~~grfS--nG~~~~d~la~~lg~~~~~p~~l---- 102 (302)
....+|++|+||||||||+|+....... ...+ -||. .|+ .+++ +|.+|+++.++-+|.-...+.++
T Consensus 24 ~~~~~~~~l~vfGDSlSDsg~~~~~a~~--~~~~~~~~~-~~g----p~~~~G~~~~~~~~~p~~lg~l~~~~~~~~~~~ 96 (370)
T COG3240 24 PSLAPFQRLVVFGDSLSDSGNYYRPAGH--HGDPGSYGT-IPG----PSYQNGNGYTYVTVVPETLGQLGVNHDFTYAAA 96 (370)
T ss_pred ccccccceEEEeccchhhcccccCcccc--cCCcccccc-ccC----CcccCCCceeeeccchhhhcccccccccccccc
Confidence 4567999999999999999997533211 0111 2322 122 2333 57888899998887110111111
Q ss_pred CCCcCCCcccCcceEEEeeccCCCCC---CCccccccHHHHHHHHHHHHHHH----------------------------
Q 022109 103 SPQATGKNLLIGANFASAGSGYDDRT---SYLNHAISLTQQLQYYREYQSKL---------------------------- 151 (302)
Q Consensus 103 ~~~~~~~~~~~G~NfA~gGA~~~~~~---~~~~~~~~l~~Qv~~f~~~~~~l---------------------------- 151 (302)
+++...-....|.|||+||+++.... .......++.+|+.+|+......
T Consensus 97 ~~~~~~~~~a~gnd~A~gga~~~~~~~~~~i~~~~~~~~~Qv~~~l~a~~~~~v~~~~~~~~l~p~~l~~~~ggand~~~ 176 (370)
T COG3240 97 DPNGLYIHWAGGNDLAVGGARSTEPNTGNSIGASATSLAQQVGAFLAAGQGGFVWPNYPAQGLDPSALYFLWGGANDYLA 176 (370)
T ss_pred CcccccCcccccccHhhhccccccccccccccccccchHHHHHHHHHhcCCccccccccccccCHHHHHHHhhcchhhhc
Confidence 11111222367999999999876443 12234668889999888753220
Q ss_pred -----------------------HHHHHhcCCceeEEeccCCCCCchhhhhccCCCCCchhHHHHHHHHHHhHHHHHHHH
Q 022109 152 -----------------------AKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAAT 208 (302)
Q Consensus 152 -----------------------~~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~ 208 (302)
+++|.++|||+|+|+++||++.+|...... ...+.+.+++..||..|++.|+
T Consensus 177 ~~~~~a~~~q~~~~~~~~~~~~~Vq~L~~AGA~~i~v~~lpDl~l~P~~~~~~-----~~~~~a~~~t~~~Na~L~~~L~ 251 (370)
T COG3240 177 LPMLKAAAYQQLEGSTKADQSSAVQRLIAAGARNILVMTLPDLSLTPAGKAYG-----TEAIQASQATIAFNASLTSQLE 251 (370)
T ss_pred ccccchhhhHHHhcchhhHHHHHHHHHHHhhccEEEEeecccccccccccccc-----chHHHHHHHHHHHHHHHHHHHH
Confidence 189999999999999999999999987632 2334888999999999999999
Q ss_pred HHHhhCCCceEEEeeccHHHHHHHhCcccCCCcccCccccCCccccccccccCCCCCCCCCCCCCceeeCCCChhHHHHH
Q 022109 209 NLQKQLPDLKIVIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPGTCSNASQYVFWDSVHPSQAANQ 288 (302)
Q Consensus 209 ~l~~~~~~~~i~~~D~~~~~~~v~~nP~~yGf~~~~~~Cc~~g~~~~~~~~c~~~~~~~C~~p~~ylfwD~vHPT~~~h~ 288 (302)
++ +.+|+.+|++.++++++.||++|||+|++..||.....+ ..|....+..|..|++|+|||.+|||+++|+
T Consensus 252 ~~-----g~nIi~iD~~~llk~im~nPa~fGlant~~~~c~~~~~~---~~~~a~~p~~~~~~~~ylFaD~vHPTt~~H~ 323 (370)
T COG3240 252 QL-----GGNIIRIDTYTLLKEIMTNPAEFGLANTTAPACDATVSN---PACSASLPALCAAPQKYLFADSVHPTTAVHH 323 (370)
T ss_pred Hh-----cCcEEEeEhHHHHHHHHhCHHhcCcccCCCcccCcccCC---cccccccccccCCccceeeecccCCchHHHH
Confidence 88 488999999999999999999999999999999765433 2676655545566788999999999999999
Q ss_pred HHHHHHHHhc
Q 022109 289 VIADELIVQG 298 (302)
Q Consensus 289 ~iA~~~~~~~ 298 (302)
+||++++...
T Consensus 324 liAeyila~l 333 (370)
T COG3240 324 LIAEYILARL 333 (370)
T ss_pred HHHHHHHHHH
Confidence 9999998764
No 7
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified []. Members of this entry include; Aeromonas hydrophila lipase, Vibrio mimicus arylesterase, Vibrio parahaemolyticus thermolabile haemolysin, rabbit phospholipase (AdRab-B), and Brassica napus anter-specific proline-rich protein.; GO: 0016788 hydrolase activity, acting on ester bonds, 0006629 lipid metabolic process; PDB: 2WAO_A 2WAB_A 1V2G_A 1U8U_A 1JRL_A 1IVN_A 1J00_A 1DEO_A 1K7C_A 1PP4_A ....
Probab=99.85 E-value=4.9e-21 Score=167.26 Aligned_cols=188 Identities=28% Similarity=0.494 Sum_probs=130.7
Q ss_pred EEEcCCCcccCCCCCccchhccCCCCCCCCCCCCCCCccccCCCchHHHHHHhhcCCCCCCCCcCCCCcCCCcccCcceE
Q 022109 38 IITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANF 117 (302)
Q Consensus 38 l~vFGDSlsD~Gn~~~~~~~~~~~~~Pyg~~~p~~~~~grfSnG~~~~d~la~~lg~~~~~p~~l~~~~~~~~~~~G~Nf 117 (302)
|++||||+||. +|+++|.+|.+.++..+... .. . . .......+.|+
T Consensus 1 i~~fGDS~td~---------------------------~~~~~~~~~~~~~~~~l~~~-~~--~-~---~~~~~~~~~n~ 46 (234)
T PF00657_consen 1 IVVFGDSLTDG---------------------------GGDSNGGGWPEGLANNLSSC-LG--A-N---QRNSGVDVSNY 46 (234)
T ss_dssp EEEEESHHHHT---------------------------TTSSTTCTHHHHHHHHCHHC-CH--H-H---HHCTTEEEEEE
T ss_pred CEEEeehhccc---------------------------CCCCCCcchhhhHHHHHhhc-cc--c-c---cCCCCCCeecc
Confidence 68999999999 24567889999999887221 00 0 0 00112345899
Q ss_pred EEeeccCCCCC----CC--------------------------cc-ccc-------cHHHHHHHHHHHHHHHHHHHHhcC
Q 022109 118 ASAGSGYDDRT----SY--------------------------LN-HAI-------SLTQQLQYYREYQSKLAKNMYGLG 159 (302)
Q Consensus 118 A~gGA~~~~~~----~~--------------------------~~-~~~-------~l~~Qv~~f~~~~~~l~~~L~~~G 159 (302)
|++|+++.... .. .+ ... .....+..|.+...++.++|.+.|
T Consensus 47 a~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~i~~G~ND~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~ 126 (234)
T PF00657_consen 47 AISGATSDGDLYNLWAQVQNISQQISRLLDSKSFYDPDLVVIWIGTNDYFNNRDSSDNNTSVEEFVENLRNAIKRLRSNG 126 (234)
T ss_dssp E-TT--CC-HGGCCCCTCHHHHHHHHHHHHHHHHHTTSEEEEE-SHHHHSSCCSCSTTHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccCCCccccccchhhHHHHHHHHHhhccccccccCCcceEEEecccCcchhhcccchhhhhHhhHhhhhhhhhhHHhccC
Confidence 99999854111 00 00 000 112233344444444458888999
Q ss_pred Cc-----eeEEeccCCCCCchhhhhccCCCCCchhHHHHHHHHHHhHHHHHHHHHHHhhCC-CceEEEeeccHHHHHH--
Q 022109 160 AR-----KFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLP-DLKIVIFDIFKPIYDL-- 231 (302)
Q Consensus 160 ar-----~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~-~~~i~~~D~~~~~~~v-- 231 (302)
+| +++++++||+++.|....... ....|.+.++..+..||++|++.++++++.++ +.++.++|++..+.+.
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~n~~l~~~~~~l~~~~~~~~~v~~~D~~~~~~~~~~ 205 (234)
T PF00657_consen 127 ARLIIVANIVVINLPPIGCLPAWSSNNK-DSASCIERLNAIVAAFNSALREVAAQLRKDYPKGANVPYFDIYSIFSDMYG 205 (234)
T ss_dssp TEEEEEEEEEEEHHC-GGGSTTHHHTHT-TTCTTHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCTEEEEEHHHHHHHHHH
T ss_pred Cccccccccccccccccccccccccccc-cccccchhhHHHHHHHHHHHHHHhhhcccccccCCceEEEEHHHHHHHhhh
Confidence 99 999999999998887665432 24679999999999999999999999988765 8899999999999997
Q ss_pred HhCcccCCCcccCccccCCccccccccccCCCCCCCCCCCCCceeeCCCChhHHHHHHHHHHH
Q 022109 232 VQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPGTCSNASQYVFWDSVHPSQAANQVIADEL 294 (302)
Q Consensus 232 ~~nP~~yGf~~~~~~Cc~~g~~~~~~~~c~~~~~~~C~~p~~ylfwD~vHPT~~~h~~iA~~~ 294 (302)
+.+|.. ++|+|||++|||+++|++||++|
T Consensus 206 ~~~~~~----------------------------------~~~~~~D~~Hpt~~g~~~iA~~i 234 (234)
T PF00657_consen 206 IQNPEN----------------------------------DKYMFWDGVHPTEKGHKIIAEYI 234 (234)
T ss_dssp HHHGGH----------------------------------HHCBBSSSSSB-HHHHHHHHHHH
T ss_pred ccCccc----------------------------------ceeccCCCcCCCHHHHHHHHcCC
Confidence 554522 47899999999999999999976
No 8
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=98.78 E-value=3.1e-08 Score=83.90 Aligned_cols=165 Identities=19% Similarity=0.167 Sum_probs=93.0
Q ss_pred EEEEcCCCcccCCCCCccchhccCCCCCCCCCCCCCCCccccCCCchHHHHHHhhcCCCCCCCCcCCCCcCCCcccCcce
Q 022109 37 AIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGAN 116 (302)
Q Consensus 37 ~l~vFGDSlsD~Gn~~~~~~~~~~~~~Pyg~~~p~~~~~grfSnG~~~~d~la~~lg~~~~~p~~l~~~~~~~~~~~G~N 116 (302)
+|++||||.++--... + ....+..|+++|++.+.-+ . +. ..-.|
T Consensus 1 ~i~~~GDSit~G~~~~-----------~------------~~~~~~~~~~~l~~~l~~~-~-~~-----------~~~~N 44 (185)
T cd01832 1 RYVALGDSITEGVGDP-----------V------------PDGGYRGWADRLAAALAAA-D-PG-----------IEYAN 44 (185)
T ss_pred CeeEecchhhcccCCC-----------C------------CCCccccHHHHHHHHhccc-C-CC-----------ceEee
Confidence 4899999999833320 0 1123478889998887432 0 10 11268
Q ss_pred EEEeeccCCCCC---------CC-------ccc-cccH-HHHHHHHHHHHHHHHHHHHhcCCceeEEeccCCC-CCchhh
Q 022109 117 FASAGSGYDDRT---------SY-------LNH-AISL-TQQLQYYREYQSKLAKNMYGLGARKFGVTSLPPL-GCLPAA 177 (302)
Q Consensus 117 fA~gGA~~~~~~---------~~-------~~~-~~~l-~~Qv~~f~~~~~~l~~~L~~~Gar~~vv~~lppl-g~~P~~ 177 (302)
.+++|++..... .. .+. ...- ....+.|.+....+.+++...+++ |+++++||. +..|..
T Consensus 45 ~g~~G~~~~~~~~~~~~~~~~~~~d~vii~~G~ND~~~~~~~~~~~~~~~~~~i~~i~~~~~~-vil~~~~~~~~~~~~~ 123 (185)
T cd01832 45 LAVRGRRTAQILAEQLPAALALRPDLVTLLAGGNDILRPGTDPDTYRADLEEAVRRLRAAGAR-VVVFTIPDPAVLEPFR 123 (185)
T ss_pred ccCCcchHHHHHHHHHHHHHhcCCCEEEEeccccccccCCCCHHHHHHHHHHHHHHHHhCCCE-EEEecCCCccccchhH
Confidence 888887643110 00 000 0000 112344555555555666666765 778888887 322221
Q ss_pred hhccCCCCCchhHHHHHHHHHHhHHHHHHHHHHHhhCCCceEEEeeccHHHHHHHhCcccCCCcccCccccCCccccccc
Q 022109 178 RTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTV 257 (302)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~v~~nP~~yGf~~~~~~Cc~~g~~~~~~ 257 (302)
...+.....+|+.|++..++ -++.++|++..+. +.
T Consensus 124 ------------~~~~~~~~~~n~~l~~~a~~-------~~v~~vd~~~~~~------------------~~-------- 158 (185)
T cd01832 124 ------------RRVRARLAAYNAVIRAVAAR-------YGAVHVDLWEHPE------------------FA-------- 158 (185)
T ss_pred ------------HHHHHHHHHHHHHHHHHHHH-------cCCEEEecccCcc------------------cC--------
Confidence 12233456677777665543 2488888875432 00
Q ss_pred cccCCCCCCCCCCCCCceeeCCCChhHHHHHHHHHHHHH
Q 022109 258 FLCNPKSPGTCSNASQYVFWDSVHPSQAANQVIADELIV 296 (302)
Q Consensus 258 ~~c~~~~~~~C~~p~~ylfwD~vHPT~~~h~~iA~~~~~ 296 (302)
...++.-|++||++++|+++|+.+++
T Consensus 159 -------------~~~~~~~DgiHpn~~G~~~~A~~i~~ 184 (185)
T cd01832 159 -------------DPRLWASDRLHPSAAGHARLAALVLA 184 (185)
T ss_pred -------------CccccccCCCCCChhHHHHHHHHHhh
Confidence 01223359999999999999999875
No 9
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A. tumefaciens. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.72 E-value=1e-07 Score=82.57 Aligned_cols=100 Identities=15% Similarity=0.073 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHHHHhc------CCceeEEeccCCCCCchhhhhccCCCCCchhHHHHHHHHHHhHHHHHHHHHHHhhCC
Q 022109 142 QYYREYQSKLAKNMYGL------GARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLP 215 (302)
Q Consensus 142 ~~f~~~~~~l~~~L~~~------Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~ 215 (302)
+.|.+..+++.+++.+. +..+|+++..||+...+... ..+....+.....||+.+++..++.
T Consensus 101 ~~~~~~l~~lv~~i~~~~~~~~~~~~~iil~~pp~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~a~~~----- 168 (208)
T cd01839 101 AEIAQGLGALVDIIRTAPIEPGMPAPKILIVAPPPIRTPKGSL-------AGKFAGAEEKSKGLADAYRALAEEL----- 168 (208)
T ss_pred HHHHHHHHHHHHHHHhccccccCCCCCEEEEeCCccCccccch-------hhhhccHHHHHHHHHHHHHHHHHHh-----
Confidence 44555555555555554 46678888888872211110 1122234555667777776655432
Q ss_pred CceEEEeeccHHHHHHHhCcccCCCcccCccccCCccccccccccCCCCCCCCCCCCCceeeCCCChhHHHHHHHHHHHH
Q 022109 216 DLKIVIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPGTCSNASQYVFWDSVHPSQAANQVIADELI 295 (302)
Q Consensus 216 ~~~i~~~D~~~~~~~v~~nP~~yGf~~~~~~Cc~~g~~~~~~~~c~~~~~~~C~~p~~ylfwD~vHPT~~~h~~iA~~~~ 295 (302)
++.++|++.++. . ...|++|||+++|++||+.++
T Consensus 169 --~~~~iD~~~~~~-------------------------------------~-------~~~DGvH~~~~G~~~~a~~l~ 202 (208)
T cd01839 169 --GCHFFDAGSVGS-------------------------------------T-------SPVDGVHLDADQHAALGQALA 202 (208)
T ss_pred --CCCEEcHHHHhc-------------------------------------c-------CCCCccCcCHHHHHHHHHHHH
Confidence 367788654321 0 125999999999999999998
Q ss_pred Hhcc
Q 022109 296 VQGF 299 (302)
Q Consensus 296 ~~~~ 299 (302)
+...
T Consensus 203 ~~i~ 206 (208)
T cd01839 203 SVIR 206 (208)
T ss_pred HHHh
Confidence 7543
No 10
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.65 E-value=4.1e-07 Score=76.85 Aligned_cols=22 Identities=23% Similarity=0.388 Sum_probs=19.4
Q ss_pred eeeCCCChhHHHHHHHHHHHHH
Q 022109 275 VFWDSVHPSQAANQVIADELIV 296 (302)
Q Consensus 275 lfwD~vHPT~~~h~~iA~~~~~ 296 (302)
++.|++|||+++|+++|+.+.+
T Consensus 154 ~~~DglHpn~~Gy~~~a~~l~~ 175 (177)
T cd01844 154 ALVDGIHPTDLGHMRYADRFEP 175 (177)
T ss_pred CCCCCCCCCHHHHHHHHHHHhh
Confidence 3469999999999999999875
No 11
>cd01823 SEST_like SEST_like. A family of secreted SGNH-hydrolases similar to Streptomyces scabies esterase (SEST), a causal agent of the potato scab disease, which hydrolyzes a specific ester bond in suberin, a plant lipid. The tertiary fold of this enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxylic acid.
Probab=98.64 E-value=9.3e-07 Score=79.10 Aligned_cols=127 Identities=17% Similarity=0.118 Sum_probs=67.8
Q ss_pred HHHHHHHHHHHHHHHHhc-CCceeEEeccCCCCCc----hhhhhccC-CCCCchhHHHHHHHHHHhHHHHHHHHHHHhhC
Q 022109 141 LQYYREYQSKLAKNMYGL-GARKFGVTSLPPLGCL----PAARTLFG-YHESGCVSRINTDAQQFNKKVSSAATNLQKQL 214 (302)
Q Consensus 141 v~~f~~~~~~l~~~L~~~-Gar~~vv~~lpplg~~----P~~~~~~~-~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~ 214 (302)
++.|.+....+.++|.+. .-.+|+|++.|++--. |....... .......+.+++....+|+.+++..++ +
T Consensus 126 ~~~~~~~l~~~l~~i~~~~p~a~I~~~gyp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~i~~~a~~----~ 201 (259)
T cd01823 126 LDEVGARLKAVLDRIRERAPNARVVVVGYPRLFPPDGGDCDKSCSPGTPLTPADRPELNQLVDKLNALIRRAAAD----A 201 (259)
T ss_pred HHHHHHHHHHHHHHHHhhCCCcEEEEecccccccCCCCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHH----h
Confidence 445555555555666643 3346888998774311 00000000 000122345566666777666665544 3
Q ss_pred CCceEEEeeccHHHHHHHhCcccCCCcccCccccCCccccccccccCCCCCCCCCCCCCceeeCCCChhHHHHHHHHHHH
Q 022109 215 PDLKIVIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPGTCSNASQYVFWDSVHPSQAANQVIADEL 294 (302)
Q Consensus 215 ~~~~i~~~D~~~~~~~v~~nP~~yGf~~~~~~Cc~~g~~~~~~~~c~~~~~~~C~~p~~ylfwD~vHPT~~~h~~iA~~~ 294 (302)
...++.++|++..+..- ..|.... ++... .+....+.-|++||++++|+.||+.+
T Consensus 202 ~~~~v~fvD~~~~f~~~-------------~~~~~~~-------~~~~~-----~~~~~~~~~d~~HPn~~G~~~~A~~i 256 (259)
T cd01823 202 GDYKVRFVDTDAPFAGH-------------RACSPDP-------WSRSV-----LDLLPTRQGKPFHPNAAGHRAIADLI 256 (259)
T ss_pred CCceEEEEECCCCcCCC-------------ccccCCC-------ccccc-----cCCCCCCCccCCCCCHHHHHHHHHHH
Confidence 33568999999766541 1222110 00000 01123345699999999999999998
Q ss_pred HH
Q 022109 295 IV 296 (302)
Q Consensus 295 ~~ 296 (302)
.+
T Consensus 257 ~~ 258 (259)
T cd01823 257 VD 258 (259)
T ss_pred hh
Confidence 75
No 12
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.61 E-value=2e-07 Score=79.44 Aligned_cols=102 Identities=23% Similarity=0.366 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHHHHHh-cCCceeEEeccCCCCCchhhhhccCCCCCchhHHHHHHHHHHhHHHHHHHHHHHhhCCCceEE
Q 022109 142 QYYREYQSKLAKNMYG-LGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIV 220 (302)
Q Consensus 142 ~~f~~~~~~l~~~L~~-~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~ 220 (302)
+.|.+...++.+++.+ ....+|++.++||++..|.... ......++....+|+.+++..+ +++ ++.
T Consensus 87 ~~~~~~l~~li~~i~~~~~~~~iiv~~~p~~~~~~~~~~-------~~~~~~~~~~~~~n~~~~~~a~----~~~--~~~ 153 (191)
T cd01836 87 ARWRKQLAELVDALRAKFPGARVVVTAVPPLGRFPALPQ-------PLRWLLGRRARLLNRALERLAS----EAP--RVT 153 (191)
T ss_pred HHHHHHHHHHHHHHHhhCCCCEEEEECCCCcccCCCCcH-------HHHHHHHHHHHHHHHHHHHHHh----cCC--CeE
Confidence 4455555555566655 3556789999999876653211 1223344455566666655444 332 467
Q ss_pred EeeccHHHHHHHhCcccCCCcccCccccCCccccccccccCCCCCCCCCCCCCceeeCCCChhHHHHHHHHHHHHHhc
Q 022109 221 IFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPGTCSNASQYVFWDSVHPSQAANQVIADELIVQG 298 (302)
Q Consensus 221 ~~D~~~~~~~v~~nP~~yGf~~~~~~Cc~~g~~~~~~~~c~~~~~~~C~~p~~ylfwD~vHPT~~~h~~iA~~~~~~~ 298 (302)
++|++..+. ..++.-|++||++++|+++|+.+.+..
T Consensus 154 ~id~~~~~~------------------------------------------~~~~~~DglHpn~~Gy~~~a~~l~~~i 189 (191)
T cd01836 154 LLPATGPLF------------------------------------------PALFASDGFHPSAAGYAVWAEALAPAI 189 (191)
T ss_pred EEecCCccc------------------------------------------hhhccCCCCCCChHHHHHHHHHHHHHH
Confidence 778765432 112335999999999999999998753
No 13
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=98.59 E-value=4e-07 Score=76.99 Aligned_cols=104 Identities=15% Similarity=0.192 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHHHHHhcCCceeEEeccCCCCCchhhhhccCCCCCchhHHHHHHHHHHhHHHHHHHHHHHhhCCCceEEE
Q 022109 142 QYYREYQSKLAKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVI 221 (302)
Q Consensus 142 ~~f~~~~~~l~~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~ 221 (302)
..|.+..+.+.+++.+.|++ ++++..+|....+... .....+.....||+.+++..++ .++.+
T Consensus 79 ~~~~~~~~~li~~~~~~~~~-~il~~~~p~~~~~~~~---------~~~~~~~~~~~~n~~~~~~a~~-------~~v~~ 141 (183)
T cd04501 79 EMIKDNIRSMVELAEANGIK-VILASPLPVDDYPWKP---------QWLRPANKLKSLNRWLKDYARE-------NGLLF 141 (183)
T ss_pred HHHHHHHHHHHHHHHHCCCc-EEEEeCCCcCccccch---------hhcchHHHHHHHHHHHHHHHHH-------cCCCE
Confidence 34555555566777777776 5556666655433211 0112334556777776655543 24889
Q ss_pred eeccHHHHHHHhCcccCCCcccCccccCCccccccccccCCCCCCCCCCCCCceeeCCCChhHHHHHHHHHHHHHh
Q 022109 222 FDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPGTCSNASQYVFWDSVHPSQAANQVIADELIVQ 297 (302)
Q Consensus 222 ~D~~~~~~~v~~nP~~yGf~~~~~~Cc~~g~~~~~~~~c~~~~~~~C~~p~~ylfwD~vHPT~~~h~~iA~~~~~~ 297 (302)
+|++..+.+.-. ......+..|++||++++|+++|+.+.+.
T Consensus 142 vd~~~~~~~~~~-----------------------------------~~~~~~~~~DgvHp~~~Gy~~~a~~i~~~ 182 (183)
T cd04501 142 LDFYSPLLDERN-----------------------------------VGLKPGLLTDGLHPSREGYRVMAPLAEKA 182 (183)
T ss_pred Eechhhhhcccc-----------------------------------ccccccccCCCCCCCHHHHHHHHHHHHHh
Confidence 999987664210 01123445799999999999999998764
No 14
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=98.53 E-value=4.2e-07 Score=77.40 Aligned_cols=110 Identities=16% Similarity=0.247 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHHHHHHh--cCCceeEEeccCCCCCchhhhhccCCCCCchhHHHHHHHHHHhHHHHHHHHHHHhhCCCce
Q 022109 141 LQYYREYQSKLAKNMYG--LGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLK 218 (302)
Q Consensus 141 v~~f~~~~~~l~~~L~~--~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~ 218 (302)
++.|.+..+++.+++.+ .|+ ++++++.||+........... ........++....||+.+++..+ ++ .
T Consensus 87 ~~~~~~~~~~~i~~~~~~~~~~-~ii~~t~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~----~~---~ 156 (199)
T cd01838 87 LDEYKENLRKIVSHLKSLSPKT-KVILITPPPVDEEAWEKSLED--GGSQPGRTNELLKQYAEACVEVAE----EL---G 156 (199)
T ss_pred HHHHHHHHHHHHHHHHhhCCCC-eEEEeCCCCCCHHHHhhhhcc--ccCCccccHHHHHHHHHHHHHHHH----Hh---C
Confidence 45555555555555555 455 577788887653322110000 001123345566777777665444 32 3
Q ss_pred EEEeeccHHHHHHHhCcccCCCcccCccccCCccccccccccCCCCCCCCCCCCCceeeCCCChhHHHHHHHHHHHHHh
Q 022109 219 IVIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPGTCSNASQYVFWDSVHPSQAANQVIADELIVQ 297 (302)
Q Consensus 219 i~~~D~~~~~~~v~~nP~~yGf~~~~~~Cc~~g~~~~~~~~c~~~~~~~C~~p~~ylfwD~vHPT~~~h~~iA~~~~~~ 297 (302)
+.++|++..+... +. ....++.|++||++++|+++|+.+.+.
T Consensus 157 ~~~iD~~~~~~~~---~~----------------------------------~~~~~~~Dg~Hpn~~G~~~~a~~l~~~ 198 (199)
T cd01838 157 VPVIDLWTAMQEE---AG----------------------------------WLESLLTDGLHFSSKGYELLFEEIVKV 198 (199)
T ss_pred CcEEEHHHHHHhc---cC----------------------------------chhhhcCCCCCcCHhHHHHHHHHHHhh
Confidence 7888998776641 10 012244699999999999999998763
No 15
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE. The P. bryantii XynE gene is located in a xylanase gene cluster. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.49 E-value=6.2e-07 Score=77.52 Aligned_cols=24 Identities=33% Similarity=0.444 Sum_probs=20.4
Q ss_pred CCceeeCCCChhHHHHHHHHHHHH
Q 022109 272 SQYVFWDSVHPSQAANQVIADELI 295 (302)
Q Consensus 272 ~~ylfwD~vHPT~~~h~~iA~~~~ 295 (302)
.+|+.+|++||++++|++||+.+.
T Consensus 178 ~~~~~~DGvHpn~~Gy~~~A~~i~ 201 (204)
T cd01830 178 PAYDSGDHLHPNDAGYQAMADAVD 201 (204)
T ss_pred cccCCCCCCCCCHHHHHHHHHhcC
Confidence 356668999999999999999764
No 16
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=98.48 E-value=1.3e-06 Score=75.01 Aligned_cols=108 Identities=14% Similarity=0.136 Sum_probs=64.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCceeEEeccCCCCCchhhhhccCCCCCchhHHHHHHHHHHhHHHHHHHHHHHhhCCCceEE
Q 022109 141 LQYYREYQSKLAKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIV 220 (302)
Q Consensus 141 v~~f~~~~~~l~~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~ 220 (302)
++.|.+...++.+++.+.|++ +++++.||..... . .. ..+.....||+.+++..++. .+.
T Consensus 89 ~~~~~~nl~~ii~~~~~~~~~-~il~tp~~~~~~~---~------~~---~~~~~~~~~~~~~~~~a~~~-------~~~ 148 (198)
T cd01821 89 YTTYKEYLRRYIAEARAKGAT-PILVTPVTRRTFD---E------GG---KVEDTLGDYPAAMRELAAEE-------GVP 148 (198)
T ss_pred HHHHHHHHHHHHHHHHHCCCe-EEEECCccccccC---C------CC---cccccchhHHHHHHHHHHHh-------CCC
Confidence 566666666666778788886 5555655421110 0 00 12223455676666555432 378
Q ss_pred EeeccHHHHHHHhCcccCCCcccCccccCCccccccccccCCCCCCCCCCCC-CceeeCCCChhHHHHHHHHHHHHHh
Q 022109 221 IFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPGTCSNAS-QYVFWDSVHPSQAANQVIADELIVQ 297 (302)
Q Consensus 221 ~~D~~~~~~~v~~nP~~yGf~~~~~~Cc~~g~~~~~~~~c~~~~~~~C~~p~-~ylfwD~vHPT~~~h~~iA~~~~~~ 297 (302)
++|++..+.+..+.-+. .. ..+. .++..|++||++++|++||+.+++.
T Consensus 149 ~vD~~~~~~~~~~~~g~---~~--------------------------~~~~~~~~~~DgvHp~~~G~~~~a~~i~~~ 197 (198)
T cd01821 149 LIDLNAASRALYEAIGP---EK--------------------------SKKYFPEGPGDNTHFSEKGADVVARLVAEE 197 (198)
T ss_pred EEecHHHHHHHHHHhCh---Hh--------------------------HHhhCcCCCCCCCCCCHHHHHHHHHHHHhh
Confidence 89999999876542100 00 0000 2445799999999999999998864
No 17
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional
Probab=98.47 E-value=8.6e-07 Score=76.03 Aligned_cols=29 Identities=34% Similarity=0.399 Sum_probs=24.1
Q ss_pred CceeeCCCChhHHHHHHHHHHHHHhccCC
Q 022109 273 QYVFWDSVHPSQAANQVIADELIVQGFAL 301 (302)
Q Consensus 273 ~ylfwD~vHPT~~~h~~iA~~~~~~~~~~ 301 (302)
+++..|++||++++|+++|+.+.+...++
T Consensus 158 ~~~~~DGiHpn~~Gy~~~A~~i~~~l~~~ 186 (191)
T PRK10528 158 QWMQDDGIHPNRDAQPFIADWMAKQLQPL 186 (191)
T ss_pred hhcCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 34557999999999999999998876554
No 18
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.44 E-value=4.8e-06 Score=70.60 Aligned_cols=22 Identities=23% Similarity=0.309 Sum_probs=19.6
Q ss_pred eeCCCChhHHHHHHHHHHHHHh
Q 022109 276 FWDSVHPSQAANQVIADELIVQ 297 (302)
Q Consensus 276 fwD~vHPT~~~h~~iA~~~~~~ 297 (302)
.-|++||++++|++||+.+++.
T Consensus 165 ~~Dg~Hpn~~G~~~~A~~i~~~ 186 (188)
T cd01827 165 VPDWVHPNEKGAYILAKVVYKA 186 (188)
T ss_pred cCCCCCcCHHHHHHHHHHHHHH
Confidence 3599999999999999999865
No 19
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=98.29 E-value=4.9e-06 Score=69.62 Aligned_cols=24 Identities=21% Similarity=0.422 Sum_probs=20.7
Q ss_pred ceeeCCCChhHHHHHHHHHHHHHh
Q 022109 274 YVFWDSVHPSQAANQVIADELIVQ 297 (302)
Q Consensus 274 ylfwD~vHPT~~~h~~iA~~~~~~ 297 (302)
++.-|++||++++|+++|+.+.+.
T Consensus 152 ~~~~DgvHpn~~G~~~~a~~i~~~ 175 (177)
T cd01822 152 LMQSDGIHPNAEGQPIIAENVWPA 175 (177)
T ss_pred hhCCCCCCcCHHHHHHHHHHHHHh
Confidence 345699999999999999998864
No 20
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=98.28 E-value=1.7e-05 Score=66.31 Aligned_cols=22 Identities=32% Similarity=0.342 Sum_probs=19.9
Q ss_pred eeCCCChhHHHHHHHHHHHHHh
Q 022109 276 FWDSVHPSQAANQVIADELIVQ 297 (302)
Q Consensus 276 fwD~vHPT~~~h~~iA~~~~~~ 297 (302)
+.|++||++++|++||+.+++.
T Consensus 146 ~~DgiHPn~~G~~~iA~~l~~~ 167 (169)
T cd01831 146 IGCDWHPTVAGHQKIAKHLLPA 167 (169)
T ss_pred cCCCCCCCHHHHHHHHHHHHHH
Confidence 4799999999999999999864
No 21
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.22 E-value=8.9e-06 Score=69.39 Aligned_cols=97 Identities=13% Similarity=0.142 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHHHHhcCCceeEEeccCCCCCchhhhhccCCCCCchhHHHHHHHHHHhHHHHHHHHHHHhhCCCceEEE
Q 022109 142 QYYREYQSKLAKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVI 221 (302)
Q Consensus 142 ~~f~~~~~~l~~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~ 221 (302)
+.|.+..+++.+++ ..++ +|+++++||...... ...+.....+|+.+++..++ + ++.+
T Consensus 95 ~~~~~~~~~ii~~~-~~~~-~vi~~~~~p~~~~~~-------------~~~~~~~~~~n~~~~~~a~~----~---~~~~ 152 (193)
T cd01835 95 RAFLFGLNQLLEEA-KRLV-PVLVVGPTPVDEAKM-------------PYSNRRIARLETAFAEVCLR----R---DVPF 152 (193)
T ss_pred HHHHHHHHHHHHHH-hcCC-cEEEEeCCCcccccc-------------chhhHHHHHHHHHHHHHHHH----c---CCCe
Confidence 44555444443433 2344 477778776542110 01233456677766655443 2 4788
Q ss_pred eeccHHHHHHHhCcccCCCcccCccccCCccccccccccCCCCCCCCCCCCCceeeCCCChhHHHHHHHHHHHHH
Q 022109 222 FDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPGTCSNASQYVFWDSVHPSQAANQVIADELIV 296 (302)
Q Consensus 222 ~D~~~~~~~v~~nP~~yGf~~~~~~Cc~~g~~~~~~~~c~~~~~~~C~~p~~ylfwD~vHPT~~~h~~iA~~~~~ 296 (302)
+|++..+.+. +. ....++..|++||++++|++||+.+++
T Consensus 153 vd~~~~~~~~---~~---------------------------------~~~~~~~~Dg~Hpn~~G~~~~a~~~~~ 191 (193)
T cd01835 153 LDTFTPLLNH---PQ---------------------------------WRRELAATDGIHPNAAGYGWLAWLVLH 191 (193)
T ss_pred EeCccchhcC---cH---------------------------------HHHhhhccCCCCCCHHHHHHHHHHHhc
Confidence 8998766541 10 001233359999999999999999874
No 22
>cd01824 Phospholipase_B_like Phospholipase-B_like. This subgroup of the SGNH-family of lipolytic enzymes may have both esterase and phospholipase-A/lysophospholipase activity. It's members may be involved in the conversion of phosphatidylcholine to fatty acids and glycerophosphocholine, perhaps in the context of dietary lipid uptake. Members may be membrane proteins. The tertiary fold of the SGNH-hydrolases is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; Its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases.
Probab=98.12 E-value=0.00011 Score=67.09 Aligned_cols=127 Identities=13% Similarity=0.082 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCc-eeEEeccCCCCCchhhhhccCC----CCCchh----------HHHHHHHHHHhHHHHH
Q 022109 141 LQYYREYQSKLAKNMYGLGAR-KFGVTSLPPLGCLPAARTLFGY----HESGCV----------SRINTDAQQFNKKVSS 205 (302)
Q Consensus 141 v~~f~~~~~~l~~~L~~~Gar-~~vv~~lpplg~~P~~~~~~~~----~~~~~~----------~~~~~~~~~~N~~L~~ 205 (302)
++.|.+..+++.+.|.+..-| .|+++++|++..++........ ....|. +.+.+....|++.+++
T Consensus 144 ~~~~~~nL~~~L~~Lr~~~P~~~V~lv~~~~~~~l~~~~~~p~~c~~~~~~~C~c~~~~~~~~~~~~~~~~~~y~~~~~e 223 (288)
T cd01824 144 PQTFVKNLRKALDILRDEVPRAFVNLVGLLNVASLRSLTKKPLQCETLLAPECPCLLGPTENSYQDLKKFYKEYQNEVEE 223 (288)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcEEEEEcCCCcHHHHHhccCCccccccCCCcCCCcCCCCcchHHHHHHHHHHHHHHHHH
Confidence 345555544444666665544 4777778887655544311000 012232 3555666777777766
Q ss_pred HHHHHHhhCCCceEEEeeccHHHHHHHhCcccCCCcccCccccCCccccccccccCCCCCCCCCCCCCceeeCCCChhHH
Q 022109 206 AATNLQKQLPDLKIVIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPGTCSNASQYVFWDSVHPSQA 285 (302)
Q Consensus 206 ~l~~l~~~~~~~~i~~~D~~~~~~~v~~nP~~yGf~~~~~~Cc~~g~~~~~~~~c~~~~~~~C~~p~~ylfwD~vHPT~~ 285 (302)
..++-+-+..+..+++ ..++.+.+..+ .. ...+ .+++-+|.+||+++
T Consensus 224 ia~~~~~~~~~f~vv~---qPf~~~~~~~~--------------------------~~---~g~d-~~~~~~D~~Hps~~ 270 (288)
T cd01824 224 IVESGEFDREDFAVVV---QPFFEDTSLPP--------------------------LP---DGPD-LSFFSPDCFHFSQR 270 (288)
T ss_pred HHhcccccccCccEEe---eCchhcccccc--------------------------cc---CCCc-chhcCCCCCCCCHH
Confidence 5544221122333443 22233221100 00 0111 36788999999999
Q ss_pred HHHHHHHHHHHhccC
Q 022109 286 ANQVIADELIVQGFA 300 (302)
Q Consensus 286 ~h~~iA~~~~~~~~~ 300 (302)
+|.++|+.+|....|
T Consensus 271 G~~~ia~~lwn~m~~ 285 (288)
T cd01824 271 GHAIAANALWNNLLE 285 (288)
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999987654
No 23
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.08 E-value=1.9e-05 Score=66.81 Aligned_cols=109 Identities=14% Similarity=0.044 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHHHHHHhc-CCceeEEeccCCCCCchhhhhccCCCCCchhHHHHHHHHHHhHHHHHHHHHHHhhCCCceE
Q 022109 141 LQYYREYQSKLAKNMYGL-GARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKI 219 (302)
Q Consensus 141 v~~f~~~~~~l~~~L~~~-Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i 219 (302)
++.|.+..+.+.+++.+. ...+|++++.||....+. .+....+...+.+|..+++.. +++ .+
T Consensus 76 ~~~~~~~~~~li~~i~~~~~~~~iv~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~a----~~~---~v 138 (189)
T cd01825 76 ASEYRQQLREFIKRLRQILPNASILLVGPPDSLQKTG----------AGRWRTPPGLDAVIAAQRRVA----KEE---GI 138 (189)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEEcCCchhccCC----------CCCcccCCcHHHHHHHHHHHH----HHc---CC
Confidence 467777777776777764 677888888765322110 011122333455565554443 332 27
Q ss_pred EEeeccHHHHHHHhCcccCCCcccCccccCCccccccccccCCCCCCCCCCCCCceeeCCCChhHHHHHHHHHHHHHhc
Q 022109 220 VIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPGTCSNASQYVFWDSVHPSQAANQVIADELIVQG 298 (302)
Q Consensus 220 ~~~D~~~~~~~v~~nP~~yGf~~~~~~Cc~~g~~~~~~~~c~~~~~~~C~~p~~ylfwD~vHPT~~~h~~iA~~~~~~~ 298 (302)
.++|++..+.+. | + . .......++..|++|||+++|++||+.+.+..
T Consensus 139 ~~vd~~~~~~~~---------------~-~------------~----~~~~~~~~~~~Dg~Hp~~~G~~~~a~~i~~~i 185 (189)
T cd01825 139 AFWDLYAAMGGE---------------G-G------------I----WQWAEPGLARKDYVHLTPRGYERLANLLYEAL 185 (189)
T ss_pred eEEeHHHHhCCc---------------c-h------------h----hHhhcccccCCCcccCCcchHHHHHHHHHHHH
Confidence 788888775321 1 0 0 01112345567999999999999999998754
No 24
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=97.98 E-value=8.7e-05 Score=62.57 Aligned_cols=105 Identities=15% Similarity=0.214 Sum_probs=64.7
Q ss_pred HHHHHHHHHHHHHH-hcCCceeEEeccCCCCCchhhhhccCCCCCchhHHHHHHHHHHhHHHHHHHHHHHhhCCCceEEE
Q 022109 143 YYREYQSKLAKNMY-GLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVI 221 (302)
Q Consensus 143 ~f~~~~~~l~~~L~-~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~ 221 (302)
.|.+..+++.+.+. .....+|++++.++....+.. ..-.+..+.....||+.+++..++ .++.+
T Consensus 86 ~~~~~l~~~v~~~~~~~~~~~ii~~~p~~~~~~~~~--------~~~~~~~~~~~~~~n~~l~~~a~~-------~~~~~ 150 (191)
T cd01834 86 KFKTNLRRLIDRLKNKESAPRIVLVSPIAYEANEDP--------LPDGAEYNANLAAYADAVRELAAE-------NGVAF 150 (191)
T ss_pred HHHHHHHHHHHHHHcccCCCcEEEECCcccCCCCCC--------CCChHHHHHHHHHHHHHHHHHHHH-------cCCeE
Confidence 34444444445553 334456777776654332110 001234555667778777665442 24899
Q ss_pred eeccHHHHHHHhCcccCCCcccCccccCCccccccccccCCCCCCCCCCCCCceeeCCCChhHHHHHHHHHHHHHh
Q 022109 222 FDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPGTCSNASQYVFWDSVHPSQAANQVIADELIVQ 297 (302)
Q Consensus 222 ~D~~~~~~~v~~nP~~yGf~~~~~~Cc~~g~~~~~~~~c~~~~~~~C~~p~~ylfwD~vHPT~~~h~~iA~~~~~~ 297 (302)
+|++..+.+....+ +..++++|++||++++|++||+.+.++
T Consensus 151 iD~~~~~~~~~~~~-----------------------------------~~~~~~~D~~Hpn~~G~~~~a~~~~~~ 191 (191)
T cd01834 151 VDLFTPMKEAFQKA-----------------------------------GEAVLTVDGVHPNEAGHRALARLWLEA 191 (191)
T ss_pred EecHHHHHHHHHhC-----------------------------------CCccccCCCCCCCHHHHHHHHHHHHhC
Confidence 99999988644211 134567899999999999999998763
No 25
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=97.94 E-value=7.4e-05 Score=61.12 Aligned_cols=88 Identities=16% Similarity=0.206 Sum_probs=58.8
Q ss_pred HHHHh-cCCceeEEeccCCCCCchhhhhccCCCCCchhHHHHHHHHHHhHHHHHHHHHHHhhCCCceEEEeeccHHHHHH
Q 022109 153 KNMYG-LGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDL 231 (302)
Q Consensus 153 ~~L~~-~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~v 231 (302)
+.+.+ ....+|++++.|+....|.. .......+|..+++..++.... .++.++|++..+...
T Consensus 98 ~~~~~~~~~~~vv~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~ 160 (187)
T cd00229 98 DALRERAPGAKVILITPPPPPPREGL--------------LGRALPRYNEAIKAVAAENPAP---SGVDLVDLAALLGDE 160 (187)
T ss_pred HHHHHHCCCCcEEEEeCCCCCCCchh--------------hHHHHHHHHHHHHHHHHHcCCC---cceEEEEhhhhhCCC
Confidence 44443 45667888888887766641 1223456777776665554321 347777777555431
Q ss_pred HhCcccCCCcccCccccCCccccccccccCCCCCCCCCCCCCceeeCCCChhHHHHHHHHHHHHH
Q 022109 232 VQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPGTCSNASQYVFWDSVHPSQAANQVIADELIV 296 (302)
Q Consensus 232 ~~nP~~yGf~~~~~~Cc~~g~~~~~~~~c~~~~~~~C~~p~~ylfwD~vHPT~~~h~~iA~~~~~ 296 (302)
+..++++|++|||+++|+++|+.+++
T Consensus 161 ---------------------------------------~~~~~~~Dg~H~~~~G~~~~a~~i~~ 186 (187)
T cd00229 161 ---------------------------------------DKSLYSPDGIHPNPAGHKLIAEALAS 186 (187)
T ss_pred ---------------------------------------ccccccCCCCCCchhhHHHHHHHHhc
Confidence 34667899999999999999999875
No 26
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=97.91 E-value=7.8e-05 Score=61.27 Aligned_cols=95 Identities=17% Similarity=0.218 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHHHHhcCC-ceeEEeccCCCCCchhhhhccCCCCCchhHHHHHHHHHHhHHHHHHHHHHHhhCCCceEEE
Q 022109 143 YYREYQSKLAKNMYGLGA-RKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVI 221 (302)
Q Consensus 143 ~f~~~~~~l~~~L~~~Ga-r~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~ 221 (302)
.|.+..+++.+++.+..- .+|++..+||....+ .+.....||+.+++.+++.+.. +..+.+
T Consensus 61 ~~~~~~~~~i~~i~~~~p~~~ii~~~~~p~~~~~----------------~~~~~~~~n~~l~~~~~~~~~~--~~~v~~ 122 (157)
T cd01833 61 TAPDRLRALIDQMRAANPDVKIIVATLIPTTDAS----------------GNARIAEYNAAIPGVVADLRTA--GSPVVL 122 (157)
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCCcc----------------hhHHHHHHHHHHHHHHHHHhcC--CCCEEE
Confidence 344434444455555432 236666665533221 1345688999999999887553 567889
Q ss_pred eeccHHHHHHHhCcccCCCcccCccccCCccccccccccCCCCCCCCCCCCCceeeCCCChhHHHHHHHHHHHHHh
Q 022109 222 FDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPGTCSNASQYVFWDSVHPSQAANQVIADELIVQ 297 (302)
Q Consensus 222 ~D~~~~~~~v~~nP~~yGf~~~~~~Cc~~g~~~~~~~~c~~~~~~~C~~p~~ylfwD~vHPT~~~h~~iA~~~~~~ 297 (302)
+|++..+.. +++.+|++||++++|+.+|+.+++.
T Consensus 123 vd~~~~~~~------------------------------------------~~~~~Dg~Hpn~~Gy~~~a~~~~~~ 156 (157)
T cd01833 123 VDMSTGYTT------------------------------------------ADDLYDGLHPNDQGYKKMADAWYEA 156 (157)
T ss_pred EecCCCCCC------------------------------------------cccccCCCCCchHHHHHHHHHHHhh
Confidence 987754321 2355899999999999999999864
No 27
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=97.88 E-value=8.5e-05 Score=62.14 Aligned_cols=101 Identities=18% Similarity=0.182 Sum_probs=62.6
Q ss_pred HHHHHHHHHHHHHHHhc-CCceeEEeccCCCCCchhhhhccCCCCCchhHHHHHHHHHHhHHHHHHHHHHHhhCCCceEE
Q 022109 142 QYYREYQSKLAKNMYGL-GARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIV 220 (302)
Q Consensus 142 ~~f~~~~~~l~~~L~~~-Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~ 220 (302)
+.|.+..+++.+++.+. ...+++++++||+...+. +....+.....||+.+++..++ + ++.
T Consensus 71 ~~~~~~~~~l~~~~~~~~p~~~vi~~~~~p~~~~~~-----------~~~~~~~~~~~~n~~l~~~a~~----~---~~~ 132 (174)
T cd01841 71 NQFIKWYRDIIEQIREEFPNTKIYLLSVLPVLEEDE-----------IKTRSNTRIQRLNDAIKELAPE----L---GVT 132 (174)
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEEeeCCcCcccc-----------cccCCHHHHHHHHHHHHHHHHH----C---CCE
Confidence 44444444454555554 356788888887643322 0112234567788888765443 2 388
Q ss_pred EeeccHHHHHHHhCcccCCCcccCccccCCccccccccccCCCCCCCCCCCCCceeeCCCChhHHHHHHHHHHHHH
Q 022109 221 IFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPGTCSNASQYVFWDSVHPSQAANQVIADELIV 296 (302)
Q Consensus 221 ~~D~~~~~~~v~~nP~~yGf~~~~~~Cc~~g~~~~~~~~c~~~~~~~C~~p~~ylfwD~vHPT~~~h~~iA~~~~~ 296 (302)
++|++..+.+-. + +....+..|++||++++|+++|+.+.+
T Consensus 133 ~id~~~~~~~~~------------------~------------------~~~~~~~~DglH~n~~Gy~~~a~~l~~ 172 (174)
T cd01841 133 FIDLNDVLVDEF------------------G------------------NLKKEYTTDGLHFNPKGYQKLLEILEE 172 (174)
T ss_pred EEEcHHHHcCCC------------------C------------------CccccccCCCcccCHHHHHHHHHHHHh
Confidence 999998764210 0 011235579999999999999999864
No 28
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=97.77 E-value=0.00017 Score=60.04 Aligned_cols=98 Identities=16% Similarity=0.200 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHHHHh--cCCceeEEeccCCCCCchhhhhccCCCCCchhHHHHHHHHHHhHHHHHHHHHHHhhCCCceE
Q 022109 142 QYYREYQSKLAKNMYG--LGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKI 219 (302)
Q Consensus 142 ~~f~~~~~~l~~~L~~--~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i 219 (302)
..|.+....+.+++.+ .++ +|++.++||.+ +. ....+.....+|+.+++..++ -++
T Consensus 68 ~~~~~~l~~li~~~~~~~~~~-~vi~~~~~p~~--~~------------~~~~~~~~~~~n~~l~~~a~~-------~~~ 125 (169)
T cd01828 68 EDIVANYRTILEKLRKHFPNI-KIVVQSILPVG--EL------------KSIPNEQIEELNRQLAQLAQQ-------EGV 125 (169)
T ss_pred HHHHHHHHHHHHHHHHHCCCC-eEEEEecCCcC--cc------------CcCCHHHHHHHHHHHHHHHHH-------CCC
Confidence 3444444444455555 444 58888888765 10 011223457788888765542 246
Q ss_pred EEeeccHHHHHHHhCcccCCCcccCccccCCccccccccccCCCCCCCCCCCCCceeeCCCChhHHHHHHHHHHHHHh
Q 022109 220 VIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPGTCSNASQYVFWDSVHPSQAANQVIADELIVQ 297 (302)
Q Consensus 220 ~~~D~~~~~~~v~~nP~~yGf~~~~~~Cc~~g~~~~~~~~c~~~~~~~C~~p~~ylfwD~vHPT~~~h~~iA~~~~~~ 297 (302)
.++|++..+.+ . -| +...++..|++|||+++|+++|+.+.+.
T Consensus 126 ~~id~~~~~~~----~--~~------------------------------~~~~~~~~DgiHpn~~G~~~~a~~i~~~ 167 (169)
T cd01828 126 TFLDLWAVFTN----A--DG------------------------------DLKNEFTTDGLHLNAKGYAVWAAALQPY 167 (169)
T ss_pred EEEechhhhcC----C--CC------------------------------CcchhhccCccccCHHHHHHHHHHHHHh
Confidence 78898865422 0 00 1134566899999999999999998764
No 29
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=97.76 E-value=0.00025 Score=60.61 Aligned_cols=109 Identities=14% Similarity=0.105 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCceeEEeccCCCCCchhhhhccCCCCCchhHHHHHHHHHHhHHHHHHHHHHHhhCCCceEE
Q 022109 141 LQYYREYQSKLAKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIV 220 (302)
Q Consensus 141 v~~f~~~~~~l~~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~ 220 (302)
.+.|.+....+.+++.+.|++ +++++.||+... ..+.....+|..+++..+ ++ ++.
T Consensus 90 ~~~~~~~l~~lv~~~~~~~~~-vili~~pp~~~~----------------~~~~~~~~~~~~~~~~a~----~~---~~~ 145 (200)
T cd01829 90 EEEYRQRIDELLNVARAKGVP-VIWVGLPAMRSP----------------KLSADMVYLNSLYREEVA----KA---GGE 145 (200)
T ss_pred HHHHHHHHHHHHHHHHhCCCc-EEEEcCCCCCCh----------------hHhHHHHHHHHHHHHHHH----Hc---CCE
Confidence 344544444554566566665 777888775421 112334567766655443 32 378
Q ss_pred EeeccHHHHHHHhCcccCCCcccCccccCCccccccccccCCCCCCCCCCCCCceeeCCCChhHHHHHHHHHHHHHhc
Q 022109 221 IFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPGTCSNASQYVFWDSVHPSQAANQVIADELIVQG 298 (302)
Q Consensus 221 ~~D~~~~~~~v~~nP~~yGf~~~~~~Cc~~g~~~~~~~~c~~~~~~~C~~p~~ylfwD~vHPT~~~h~~iA~~~~~~~ 298 (302)
++|++..+.+ + ..|+... ......++..++..|++|||+++|+++|+.+++..
T Consensus 146 ~id~~~~~~~----~---------~~~~~~~------------~~~~~~~~~~~~~~DgvH~~~~G~~~~a~~i~~~l 198 (200)
T cd01829 146 FVDVWDGFVD----E---------NGRFTYS------------GTDVNGKKVRLRTNDGIHFTAAGGRKLAFYVEKLI 198 (200)
T ss_pred EEEhhHhhcC----C---------CCCeeee------------ccCCCCcEEEeecCCCceECHHHHHHHHHHHHHHh
Confidence 9999877632 1 1122110 00011123345567999999999999999998754
No 30
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.
Probab=97.67 E-value=0.0006 Score=58.53 Aligned_cols=102 Identities=20% Similarity=0.210 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCc-eeEEeccCCCCCchhhhhccCCCCCchhHHHHHHHHHHhHHHHHHHHHHHhhCCCceE
Q 022109 141 LQYYREYQSKLAKNMYGLGAR-KFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKI 219 (302)
Q Consensus 141 v~~f~~~~~~l~~~L~~~Gar-~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i 219 (302)
++.|.+....+.+++.+.+.+ +|+|+++++ |..... .-....+..+..||+.+++..++ ..++
T Consensus 101 ~~~~~~~l~~~i~~ir~~~p~~~Ivv~~~~~----p~~~~~------~~~~~~~~~~~~~n~~~~~~a~~------~~~v 164 (204)
T cd04506 101 EETYQNNLKKIFKEIRKLNPDAPIFLVGLYN----PFYVYF------PNITEINDIVNDWNEASQKLASQ------YKNA 164 (204)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEEecCC----cccccc------chHHHHHHHHHHHHHHHHHHHHh------CCCe
Confidence 445655555555777765533 566766531 211110 01123566778888777665432 1248
Q ss_pred EEeeccHHHHHHHhCcccCCCcccCccccCCccccccccccCCCCCCCCCCCCCceeeCCCChhHHHHHHHHHHHHH
Q 022109 220 VIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPGTCSNASQYVFWDSVHPSQAANQVIADELIV 296 (302)
Q Consensus 220 ~~~D~~~~~~~v~~nP~~yGf~~~~~~Cc~~g~~~~~~~~c~~~~~~~C~~p~~ylfwD~vHPT~~~h~~iA~~~~~ 296 (302)
.++|+++.+... + +..++..|++||++++|++||+.+++
T Consensus 165 ~~vd~~~~~~~~------------------------------------~--~~~~~~~Dg~Hpn~~G~~~~a~~l~~ 203 (204)
T cd04506 165 YFVPIFDLFSDG------------------------------------Q--NKYLLTSDHFHPNDKGYQLIADRVFK 203 (204)
T ss_pred EEEehHHhhcCC------------------------------------c--ccccccccCcCCCHHHHHHHHHHHHh
Confidence 899988766420 0 12345579999999999999999875
No 31
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=97.65 E-value=0.00032 Score=61.03 Aligned_cols=27 Identities=26% Similarity=0.084 Sum_probs=22.9
Q ss_pred eeeCCCChhHHHHHHHHHHHHHhccCC
Q 022109 275 VFWDSVHPSQAANQVIADELIVQGFAL 301 (302)
Q Consensus 275 lfwD~vHPT~~~h~~iA~~~~~~~~~~ 301 (302)
++.|++||++++|+++|+.+.+...+.
T Consensus 187 ~~~DGlHpn~~Gy~~~a~~l~~~l~~~ 213 (214)
T cd01820 187 DMPDYLHLTAAGYRKWADALHPTLARL 213 (214)
T ss_pred hcCCCCCCCHHHHHHHHHHHHHHHHhh
Confidence 357999999999999999998866544
No 32
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A ....
Probab=97.54 E-value=0.00049 Score=56.57 Aligned_cols=98 Identities=23% Similarity=0.374 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCceeEEeccCCCCCchhhhhccCCCCCchhHHHHHHHHHHhHHHHHHHHHHHhhCCCce
Q 022109 139 QQLQYYREYQSKLAKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLK 218 (302)
Q Consensus 139 ~Qv~~f~~~~~~l~~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~ 218 (302)
.-.+.|.+..+++.+.+...+ +++++.+||....+... +.+........+|+.+++.. +++ +
T Consensus 82 ~~~~~~~~~l~~~i~~~~~~~--~vi~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~a----~~~---~ 143 (179)
T PF13472_consen 82 TSPEQYEQNLRRIIEQLRPHG--PVILVSPPPRGPDPRDP---------KQDYLNRRIDRYNQAIRELA----KKY---G 143 (179)
T ss_dssp HHHHHHHHHHHHHHHHHHTTS--EEEEEE-SCSSSSTTTT---------HTTCHHHHHHHHHHHHHHHH----HHC---T
T ss_pred ccHHHHHHHHHHHHHhhcccC--cEEEecCCCcccccccc---------cchhhhhhHHHHHHHHHHHH----HHc---C
Confidence 345566666666667887777 88888888755443221 12233445566777666544 333 5
Q ss_pred EEEeeccHHHHHHHhCcccCCCcccCccccCCccccccccccCCCCCCCCCCCCCceeeCCCChhHHHHHHH
Q 022109 219 IVIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPGTCSNASQYVFWDSVHPSQAANQVI 290 (302)
Q Consensus 219 i~~~D~~~~~~~v~~nP~~yGf~~~~~~Cc~~g~~~~~~~~c~~~~~~~C~~p~~ylfwD~vHPT~~~h~~i 290 (302)
+.++|+...+.+ + ......+++.|++|||+++|++|
T Consensus 144 ~~~id~~~~~~~----~--------------------------------~~~~~~~~~~D~~Hp~~~G~~~~ 179 (179)
T PF13472_consen 144 VPFIDLFDAFDD----H--------------------------------DGWFPKYYFSDGVHPNPAGHQLI 179 (179)
T ss_dssp EEEEEHHHHHBT----T--------------------------------TSCBHTCTBTTSSSBBHHHHHHH
T ss_pred CEEEECHHHHcc----c--------------------------------cccchhhcCCCCCCcCHHHhCcC
Confidence 889999988542 1 00122456689999999999986
No 33
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=97.43 E-value=0.0016 Score=54.28 Aligned_cols=24 Identities=13% Similarity=0.079 Sum_probs=21.0
Q ss_pred CceeeCCCChhHHHHHHHHHHHHH
Q 022109 273 QYVFWDSVHPSQAANQVIADELIV 296 (302)
Q Consensus 273 ~ylfwD~vHPT~~~h~~iA~~~~~ 296 (302)
+++..|++||++++|+++|+.+.+
T Consensus 146 ~~~~~DGlH~n~~Gy~~~a~~l~~ 169 (171)
T cd04502 146 ELFQEDGLHLNDAGYALWRKVIKP 169 (171)
T ss_pred hhcCCCCCCCCHHHHHHHHHHHHh
Confidence 455689999999999999999865
No 34
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=97.37 E-value=0.00046 Score=58.36 Aligned_cols=163 Identities=20% Similarity=0.212 Sum_probs=65.6
Q ss_pred CEEEEcCCCcccCCCCCccchhccCCCCCCCCCCCCCCCccccCCCchHHHHHHhhcCCCCCCCCcCCCCcCCCcccCcc
Q 022109 36 PAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGA 115 (302)
Q Consensus 36 ~~l~vFGDSlsD~Gn~~~~~~~~~~~~~Pyg~~~p~~~~~grfSnG~~~~d~la~~lg~~~~~p~~l~~~~~~~~~~~G~ 115 (302)
+++++.|+|.+..+... +-|..|+-.+++++|++ . +
T Consensus 2 k~~v~YGsSItqG~~As--------------------------rpg~~~~~~~aR~l~~~-~-----------------i 37 (178)
T PF14606_consen 2 KRWVAYGSSITQGACAS--------------------------RPGMAYPAILARRLGLD-V-----------------I 37 (178)
T ss_dssp -EEEEEE-TT-TTTT-S--------------------------SGGGSHHHHHHHHHT-E-E-----------------E
T ss_pred CeEEEECChhhcCCCCC--------------------------CCcccHHHHHHHHcCCC-e-----------------E
Confidence 46788888888766641 23578999999999987 1 7
Q ss_pred eEEEeeccCCCCC-C-----CccccccH----HHHHHHHHHHHHHHHHHHHhcC-CceeEEeccCCCCCchhhhhccCCC
Q 022109 116 NFASAGSGYDDRT-S-----YLNHAISL----TQQLQYYREYQSKLAKNMYGLG-ARKFGVTSLPPLGCLPAARTLFGYH 184 (302)
Q Consensus 116 NfA~gGA~~~~~~-~-----~~~~~~~l----~~Qv~~f~~~~~~l~~~L~~~G-ar~~vv~~lpplg~~P~~~~~~~~~ 184 (302)
|.+++|.+..... . .....+.+ .--.+.|.+....+.+.|.+.- -.-|++..... . |.
T Consensus 38 NLGfsG~~~le~~~a~~ia~~~a~~~~ld~~~N~~~~~~~~~~~~fv~~iR~~hP~tPIllv~~~~--~-~~-------- 106 (178)
T PF14606_consen 38 NLGFSGNGKLEPEVADLIAEIDADLIVLDCGPNMSPEEFRERLDGFVKTIREAHPDTPILLVSPIP--Y-PA-------- 106 (178)
T ss_dssp EEE-TCCCS--HHHHHHHHHS--SEEEEEESHHCCTTTHHHHHHHHHHHHHTT-SSS-EEEEE-------TT--------
T ss_pred eeeecCccccCHHHHHHHhcCCCCEEEEEeecCCCHHHHHHHHHHHHHHHHHhCCCCCEEEEecCC--c-cc--------
Confidence 9999987643211 0 00000000 0011123232333334554433 34455544221 1 11
Q ss_pred CCchhHHHHHHHHHHhHHHHHHHHHHHhhCCCceEEEeeccHHHHHHHhCcccCCCcccCccccCCccccccccccCCCC
Q 022109 185 ESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKS 264 (302)
Q Consensus 185 ~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~v~~nP~~yGf~~~~~~Cc~~g~~~~~~~~c~~~~ 264 (302)
.............+|+.+++.+++++++ ..-++.|+|-..++-+
T Consensus 107 -~~~~~~~~~~~~~~~~~~r~~v~~l~~~-g~~nl~~l~g~~llg~---------------------------------- 150 (178)
T PF14606_consen 107 -GYFDNSRGETVEEFREALREAVEQLRKE-GDKNLYYLDGEELLGD---------------------------------- 150 (178)
T ss_dssp -TTS--TTS--HHHHHHHHHHHHHHHHHT-T-TTEEEE-HHHCS------------------------------------
T ss_pred -cccCchHHHHHHHHHHHHHHHHHHHHHc-CCCcEEEeCchhhcCc----------------------------------
Confidence 1111222334678999999999999764 3567888876554321
Q ss_pred CCCCCCCCCceeeCCCChhHHHHHHHHHHHHH
Q 022109 265 PGTCSNASQYVFWDSVHPSQAANQVIADELIV 296 (302)
Q Consensus 265 ~~~C~~p~~ylfwD~vHPT~~~h~~iA~~~~~ 296 (302)
+.-..-|++|||..+|..+|+.+..
T Consensus 151 -------d~e~tvDgvHP~DlG~~~~a~~l~~ 175 (178)
T PF14606_consen 151 -------DHEATVDGVHPNDLGMMRMADALEP 175 (178)
T ss_dssp --------------------------------
T ss_pred -------ccccccccccccccccccccccccc
Confidence 0112359999999999999998764
No 35
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=97.16 E-value=0.0019 Score=52.97 Aligned_cols=24 Identities=25% Similarity=0.455 Sum_probs=20.6
Q ss_pred ceeeCCCChhHHHHHHHHHHHHHh
Q 022109 274 YVFWDSVHPSQAANQVIADELIVQ 297 (302)
Q Consensus 274 ylfwD~vHPT~~~h~~iA~~~~~~ 297 (302)
++..|++||++++|+++|+.+.+.
T Consensus 126 ~~~~DgiHpn~~G~~~~a~~i~~a 149 (150)
T cd01840 126 WFYGDGVHPNPAGAKLYAALIAKA 149 (150)
T ss_pred hhcCCCCCCChhhHHHHHHHHHHh
Confidence 445699999999999999998763
No 36
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family. Acyloxyacyl-hydrolase is a leukocyte-secreted enzyme that deacetylates bacterial lipopolysaccharides.
Probab=96.80 E-value=0.014 Score=53.39 Aligned_cols=125 Identities=17% Similarity=0.170 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHHHHHHhcCCc--eeEEeccCCCCCc-hh--------hh-----hc---cC----CCCCchh------HH
Q 022109 141 LQYYREYQSKLAKNMYGLGAR--KFGVTSLPPLGCL-PA--------AR-----TL---FG----YHESGCV------SR 191 (302)
Q Consensus 141 v~~f~~~~~~l~~~L~~~Gar--~~vv~~lpplg~~-P~--------~~-----~~---~~----~~~~~~~------~~ 191 (302)
+++|.+...+..+.|.+..-+ +|++.++|++... |. .. +. .. -.-..|. +.
T Consensus 148 ~eefr~NL~~~L~~Lr~~lP~~s~ViLvgmpd~~~L~~~~~~r~hplg~~~~~vty~~~y~~lncl~~spC~gw~~~n~t 227 (305)
T cd01826 148 PEEFYENVMEALKYLDTKLPNGSHVILVGLVDGRILYDTLHNRLHPIGQLNKDVTYPNLYDYLNCLQVSPCWGWLNSNET 227 (305)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCEEEEEeccchhhhhhhhccccccchhcccccchhhhhhhhcccccCCcccccccccc
Confidence 445554444444666666534 8999999995322 11 00 00 00 0011233 23
Q ss_pred HHHHHHHHhHHHHHHHHHHHhh--CCCceEEEeeccHHHHHHHhCcccCCCcccCccccCCccccccccccCCCCCCCCC
Q 022109 192 INTDAQQFNKKVSSAATNLQKQ--LPDLKIVIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPGTCS 269 (302)
Q Consensus 192 ~~~~~~~~N~~L~~~l~~l~~~--~~~~~i~~~D~~~~~~~v~~nP~~yGf~~~~~~Cc~~g~~~~~~~~c~~~~~~~C~ 269 (302)
..++...+=++|..+..++.++ +....|.+.|.. +.+++....+.| .
T Consensus 228 ~rn~t~~~a~~l~~~~~~ia~~~~f~nF~v~~~~f~--l~~v~~~~~~~g-----------------------------~ 276 (305)
T cd01826 228 LRNLTSERAAQLSNVLKRIAANETFNNFDVHYIDFP--IQQIVDMWIAFG-----------------------------G 276 (305)
T ss_pred chhHHHHHHHHHHHHHHHHHhhccccceeEEEecch--HHHHhhHHHhcC-----------------------------C
Confidence 3344555555666666666553 334567776663 334332221111 1
Q ss_pred CCCCcee-eCCCChhHHHHHHHHHHHHH
Q 022109 270 NASQYVF-WDSVHPSQAANQVIADELIV 296 (302)
Q Consensus 270 ~p~~ylf-wD~vHPT~~~h~~iA~~~~~ 296 (302)
.+.+++. .|++||++.+|.++|+.+++
T Consensus 277 ~~~~~i~~~DgfHpsq~g~~l~a~~lW~ 304 (305)
T cd01826 277 QTWQLIEPVDGFHPSQIANALLAEVFWK 304 (305)
T ss_pred CchhhcccccCCCccHHHHHHHHHHhhc
Confidence 2345555 69999999999999999885
No 37
>COG2755 TesA Lysophospholipase L1 and related esterases [Amino acid transport and metabolism]
Probab=96.38 E-value=0.042 Score=47.40 Aligned_cols=23 Identities=26% Similarity=0.283 Sum_probs=20.7
Q ss_pred eCCCChhHHHHHHHHHHHHHhcc
Q 022109 277 WDSVHPSQAANQVIADELIVQGF 299 (302)
Q Consensus 277 wD~vHPT~~~h~~iA~~~~~~~~ 299 (302)
+|++||+.++|+.+|+.+.+...
T Consensus 187 ~Dg~H~n~~Gy~~~a~~l~~~l~ 209 (216)
T COG2755 187 EDGLHPNAKGYQALAEALAEVLA 209 (216)
T ss_pred CCCCCcCHhhHHHHHHHHHHHHH
Confidence 89999999999999999887644
No 38
>KOG3035 consensus Isoamyl acetate-hydrolyzing esterase [Lipid transport and metabolism]
Probab=95.97 E-value=0.025 Score=48.89 Aligned_cols=117 Identities=14% Similarity=0.186 Sum_probs=74.1
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHHhcC-CceeEEeccCCCCCchhhhhccCCCCCchhHHHHHHHHHHhHHHHHHHHHHH
Q 022109 133 HAISLTQQLQYYREYQSKLAKNMYGLG-ARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQ 211 (302)
Q Consensus 133 ~~~~l~~Qv~~f~~~~~~l~~~L~~~G-ar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~ 211 (302)
...++.+=+++.++.+ +-|...- -.+|++++-||+...-....... +...-.++.|+.+..|++.+.+..+++
T Consensus 91 ~hvPl~Ey~dNlr~iv----~~lks~~~~~riIlitPpp~de~~~~~~~~e-~~~~~~~RtNe~~~~Ya~ac~~la~e~- 164 (245)
T KOG3035|consen 91 QHVPLEEYKDNLRKIV----SHLKSLSPETRIILITPPPVDEEAWEKQEQE-PYVLGPERTNETVGTYAKACANLAQEI- 164 (245)
T ss_pred CccCHHHHHHHHHHHH----HHhhccCCcceEEEecCCCcCHHHHHHHhcc-chhccchhhhhHHHHHHHHHHHHHHHh-
Confidence 3455555444444433 3333322 35688888888876644433211 111223468899999999888777654
Q ss_pred hhCCCceEEEeeccHHHHHHHhCcccCCCcccCccccCCccccccccccCCCCCCCCCCCCCceeeCCCChhHHHHHHHH
Q 022109 212 KQLPDLKIVIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPGTCSNASQYVFWDSVHPSQAANQVIA 291 (302)
Q Consensus 212 ~~~~~~~i~~~D~~~~~~~v~~nP~~yGf~~~~~~Cc~~g~~~~~~~~c~~~~~~~C~~p~~ylfwD~vHPT~~~h~~iA 291 (302)
++..+|.++.+.+.- |-.+-.|||++|.|..+++++.
T Consensus 165 ------~l~~vdlws~~Q~~~-------------------------------------dw~~~~ltDGLHlS~~G~~ivf 201 (245)
T KOG3035|consen 165 ------GLYVVDLWSKMQESD-------------------------------------DWQTSCLTDGLHLSPKGNKIVF 201 (245)
T ss_pred ------CCeeeeHHhhhhhcc-------------------------------------cHHHHHhccceeeccccchhhH
Confidence 467788877776511 1123357999999999999999
Q ss_pred HHHHHhc
Q 022109 292 DELIVQG 298 (302)
Q Consensus 292 ~~~~~~~ 298 (302)
++++...
T Consensus 202 ~Ei~kvl 208 (245)
T KOG3035|consen 202 DEILKVL 208 (245)
T ss_pred HHHHHHH
Confidence 9998743
No 39
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=90.49 E-value=2.6 Score=35.71 Aligned_cols=106 Identities=16% Similarity=0.111 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHHHHHH---hcCCceeEEeccCCCC--CchhhhhccCCCCCchhHHHHHHHHHHhHHHHHHHHHHHhhC
Q 022109 140 QLQYYREYQSKLAKNMY---GLGARKFGVTSLPPLG--CLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQL 214 (302)
Q Consensus 140 Qv~~f~~~~~~l~~~L~---~~Gar~~vv~~lpplg--~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~ 214 (302)
.+++|.+-.+++..+|. ..++.=|....+| ++ +...+.... ...+...+..-+..+|..=...+ +++
T Consensus 70 ~~~~Y~~NL~~Lf~rLk~~lp~~allIW~tt~P-v~~~~~ggfl~~~---~~~~~~~lr~dv~eaN~~A~~va----~~~ 141 (183)
T cd01842 70 SMKTYRENLERLFSKLDSVLPIECLIVWNTAMP-VAEEIKGGFLLPE---LHDLSKSLRYDVLEGNFYSATLA----KCY 141 (183)
T ss_pred CHHHHHHHHHHHHHHHHhhCCCccEEEEecCCC-CCcCCcCceeccc---cccccccchhHHHHHHHHHHHHH----HHc
Confidence 56777777777766665 4666655544444 33 111111100 01122334444667774433332 232
Q ss_pred CCceEEEeeccHHHHHHHhCcccCCCcccCccccCCccccccccccCCCCCCCCCCCCCceeeCCCChhHHHHHHHHHHH
Q 022109 215 PDLKIVIFDIFKPIYDLVQSPSKSGFVEATRGCCGTGTVETTVFLCNPKSPGTCSNASQYVFWDSVHPSQAANQVIADEL 294 (302)
Q Consensus 215 ~~~~i~~~D~~~~~~~v~~nP~~yGf~~~~~~Cc~~g~~~~~~~~c~~~~~~~C~~p~~ylfwD~vHPT~~~h~~iA~~~ 294 (302)
.|.+.|++..+..-. .+--.|+||.++.+|+.+++.+
T Consensus 142 ---~~dVlDLh~~fr~~~----------------------------------------~~~~~DgVHwn~~a~r~ls~ll 178 (183)
T cd01842 142 ---GFDVLDLHYHFRHAM----------------------------------------QHRVRDGVHWNYVAHRRLSNLL 178 (183)
T ss_pred ---CceeeehHHHHHhHH----------------------------------------hhcCCCCcCcCHHHHHHHHHHH
Confidence 478889998883211 1111599999999999999998
Q ss_pred HH
Q 022109 295 IV 296 (302)
Q Consensus 295 ~~ 296 (302)
++
T Consensus 179 l~ 180 (183)
T cd01842 179 LA 180 (183)
T ss_pred HH
Confidence 75
No 40
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=78.18 E-value=1.5 Score=33.18 Aligned_cols=19 Identities=32% Similarity=0.342 Sum_probs=12.4
Q ss_pred ccccchhHHHHHHHHHHHhh
Q 022109 5 MCCGKTVLFVVLAFALALAS 24 (302)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~ 24 (302)
|. ||+.||+.|+|+++|+.
T Consensus 1 Ma-SK~~llL~l~LA~lLli 19 (95)
T PF07172_consen 1 MA-SKAFLLLGLLLAALLLI 19 (95)
T ss_pred Cc-hhHHHHHHHHHHHHHHH
Confidence 55 88888886655554443
No 41
>PF02633 Creatininase: Creatinine amidohydrolase; InterPro: IPR003785 This family includes the enzymes creatininase and 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase, also known as formamide hydrolase. Creatinase or creatinine amidohydrolase (3.5.2.10 from EC) catalyses the hydrolysis of creatinine to creatine, which can then be metabolised to urea and sarcosine by creatinase (3.5.3.3 from EC). Creatininase is a member of the urease-related amidohydrolase superfamily []. Formamide hydrolase catalyzes the hydrolysis of the formamide of 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy) (3.5.1.102 from EC). ; PDB: 3A6K_F 3A6F_A 3A6D_B 1J2U_B 3A6J_C 1J2T_A 3A6G_C 3A6H_F 1Q3K_E 3A6L_C ....
Probab=65.47 E-value=21 Score=31.43 Aligned_cols=69 Identities=17% Similarity=0.283 Sum_probs=47.1
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHhcCCceeEEeccCCCCCchhhhhccCCCCCchhHHHHHHHHHHhHHHHHHHHHHHhh
Q 022109 134 AISLTQQLQYYREYQSKLAKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQ 213 (302)
Q Consensus 134 ~~~l~~Qv~~f~~~~~~l~~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~ 213 (302)
.+++.. +.|.+...++.+.|...|.|+|+|+|-- ++ ....|+..+++++++
T Consensus 76 Tisl~~--~t~~~~l~di~~sl~~~Gf~~ivivngH----------------gG-----------N~~~l~~~~~~l~~~ 126 (237)
T PF02633_consen 76 TISLSP--ETLIALLRDILRSLARHGFRRIVIVNGH----------------GG-----------NIAALEAAARELRQE 126 (237)
T ss_dssp -BBB-H--HHHHHHHHHHHHHHHHHT--EEEEEESS----------------TT-----------HHHHHHHHHHHHHHH
T ss_pred eEEeCH--HHHHHHHHHHHHHHHHcCCCEEEEEECC----------------Hh-----------HHHHHHHHHHHHHhh
Confidence 344444 6677888888899999999999998731 11 122456777788888
Q ss_pred CCCceEEEeeccHHHHHH
Q 022109 214 LPDLKIVIFDIFKPIYDL 231 (302)
Q Consensus 214 ~~~~~i~~~D~~~~~~~v 231 (302)
+++..+.++|.+.+....
T Consensus 127 ~~~~~v~~~~~~~~~~~~ 144 (237)
T PF02633_consen 127 YPGVKVFVINWWQLAEDE 144 (237)
T ss_dssp GCC-EEEEEEGGGCSHCH
T ss_pred CCCcEEEEeechhccchh
Confidence 889999999999886654
No 42
>PLN02757 sirohydrochlorine ferrochelatase
Probab=64.88 E-value=14 Score=30.43 Aligned_cols=58 Identities=16% Similarity=0.242 Sum_probs=40.4
Q ss_pred HHHHhcCCceeEEeccCCCCCchhhhhccCCCCCchhHHHHHHHHHHhHHHHHHHHHHHhhCCCceEEEee---ccHHHH
Q 022109 153 KNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFD---IFKPIY 229 (302)
Q Consensus 153 ~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D---~~~~~~ 229 (302)
++|.+.|+|+|+| +|.++... ......+.+.++++++++|+.+|.+.. .+..+.
T Consensus 65 ~~l~~~g~~~vvV--------vP~FL~~G---------------~H~~~DIp~~v~~~~~~~p~~~i~~~~pLG~~p~l~ 121 (154)
T PLN02757 65 GRCVEQGASRVIV--------SPFFLSPG---------------RHWQEDIPALTAEAAKEHPGVKYLVTAPIGLHELMV 121 (154)
T ss_pred HHHHHCCCCEEEE--------EEhhhcCC---------------cchHhHHHHHHHHHHHHCCCcEEEECCCCCCCHHHH
Confidence 4556779999997 57776542 122455788889999999999988764 344555
Q ss_pred HHHh
Q 022109 230 DLVQ 233 (302)
Q Consensus 230 ~v~~ 233 (302)
+++.
T Consensus 122 ~ll~ 125 (154)
T PLN02757 122 DVVN 125 (154)
T ss_pred HHHH
Confidence 5554
No 43
>KOG4079 consensus Putative mitochondrial ribosomal protein mRpS25 [Translation, ribosomal structure and biogenesis]
Probab=60.50 E-value=4.7 Score=32.41 Aligned_cols=16 Identities=31% Similarity=0.507 Sum_probs=12.8
Q ss_pred hcCCceeEEeccCCCC
Q 022109 157 GLGARKFGVTSLPPLG 172 (302)
Q Consensus 157 ~~Gar~~vv~~lpplg 172 (302)
..|||+|+++|+|.+.
T Consensus 42 ~~GARdFVfwNipQiQ 57 (169)
T KOG4079|consen 42 QSGARDFVFWNIPQIQ 57 (169)
T ss_pred ccCccceEEecchhhc
Confidence 4689999999988765
No 44
>PF01903 CbiX: CbiX; InterPro: IPR002762 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents the CbiX protein, which functions as a cobalt-chelatase in the anaerobic biosynthesis of cobalamin. It catalyses the insertion of cobalt into sirohydrochlorin. The structure of CbiX from Archaeoglobus fulgidus consists of a central mixed beta-sheet flanked by four alpha-helices, although it is about half the size of other Class II tetrapyrrole chelatases []. The CbiX proteins found in archaea appear to be shorter than those found in eubacteria [].; GO: 0016829 lyase activity, 0046872 metal ion binding, 0009236 cobalamin biosynthetic process; PDB: 2XWQ_C 2DJ5_A 1TJN_A 2XWS_A 3LYH_B 2JH3_D.
Probab=56.36 E-value=16 Score=27.47 Aligned_cols=49 Identities=14% Similarity=0.233 Sum_probs=33.5
Q ss_pred HHHHhcCCceeEEeccCCCCCchhhhhccCCCCCchhHHHHHHHHHHhHHHHHHHHHHHhhCCCceEEEeec
Q 022109 153 KNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDI 224 (302)
Q Consensus 153 ~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~ 224 (302)
++|.+.|+++|+| +|.++... ......+.+.+++++.++|+.+|.+...
T Consensus 44 ~~l~~~g~~~ivv--------vP~fL~~G---------------~h~~~DIp~~l~~~~~~~~~~~v~~~~p 92 (105)
T PF01903_consen 44 ERLVAQGARRIVV--------VPYFLFPG---------------YHVKRDIPEALAEARERHPGIEVRVAPP 92 (105)
T ss_dssp HHHHCCTCSEEEE--------EEESSSSS---------------HHHHCHHHHHHCHHHHCSTTEEEEE---
T ss_pred HHHHHcCCCeEEE--------EeeeecCc---------------cchHhHHHHHHHHHHhhCCceEEEECCC
Confidence 6778889999987 46665431 1222336788889999999998887643
No 45
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=51.90 E-value=64 Score=30.06 Aligned_cols=26 Identities=15% Similarity=0.017 Sum_probs=21.5
Q ss_pred CceeeCCCChhHHHHHHHHHHHHHhc
Q 022109 273 QYVFWDSVHPSQAANQVIADELIVQG 298 (302)
Q Consensus 273 ~ylfwD~vHPT~~~h~~iA~~~~~~~ 298 (302)
.+.-=|++|.|.++.+.+|.++.+-.
T Consensus 292 rlR~~DGIh~T~~Gkrkla~~~~k~I 317 (354)
T COG2845 292 RLRAKDGIHFTKEGKRKLAFYLEKPI 317 (354)
T ss_pred EEeccCCceechhhHHHHHHHHHHHH
Confidence 44555999999999999999987643
No 46
>cd03416 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both are found in a wide range of bacteria. This subgroup also contains single domain proteins from archaea and bacteria which may represent the ancestral form of class II chelatases before domain duplication occurred.
Probab=50.59 E-value=22 Score=26.48 Aligned_cols=48 Identities=15% Similarity=0.199 Sum_probs=33.1
Q ss_pred HHHHhcCCceeEEeccCCCCCchhhhhccCCCCCchhHHHHHHHHHHhHHHHHHHHHHHhhCCCceEEEee
Q 022109 153 KNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFD 223 (302)
Q Consensus 153 ~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D 223 (302)
++|.+.|+++++| .|.+.... ......+.+.++++++++++.+|.+.+
T Consensus 51 ~~l~~~g~~~v~v--------vPlfl~~G---------------~h~~~dip~~~~~~~~~~~~~~i~~~~ 98 (101)
T cd03416 51 DELAAQGATRIVV--------VPLFLLAG---------------GHVKEDIPAALAAARARHPGVRIRYAP 98 (101)
T ss_pred HHHHHcCCCEEEE--------EeeEeCCC---------------ccccccHHHHHHHHHHHCCCeEEEecC
Confidence 5666789999987 46665432 223345677777888888998887754
No 47
>PF04914 DltD_C: DltD C-terminal region; InterPro: IPR006998 The dlt operon (dltA to dltD) of Lactobacillus rhamnosus 7469 encodes four proteins responsible for the esterification of lipoteichoic acid (LTA) by D-alanine. These esters play an important role in controlling the net anionic charge of the poly (GroP) moiety of LTA. DltA and DltC encode the D-alanine-D-alanyl carrier protein ligase (Dcl) and D-alanyl carrier protein (Dcp), respectively. Whereas the functions of DltA and DltC are defined, the functions of DltB and DltD are unknown. In vitro assays showed that DltD bound Dcp for ligation with D-alanine by Dcl in the presence of ATP. In contrast, the homologue of Dcp, the Escherichia coli acyl carrier protein (ACP), involved in fatty acid biosynthesis, was not bound to DltD and thus was not ligated with D-alanine. DltD also catalyzed the hydrolysis of the mischarged D-alanyl-ACP. The hydrophobic N-terminal sequence of DltD was required for anchoring the protein in the membrane. It is hypothesized that this membrane-associated DltD facilitates the binding of Dcp and Dcl for ligation of Dcp with D-alanine and that the resulting D-alanyl-Dcp is translocated to the primary site of D-alanylation []. These sequences contain the C-terminal region of DltD.; PDB: 3BMA_C.
Probab=46.77 E-value=47 Score=26.60 Aligned_cols=73 Identities=15% Similarity=0.097 Sum_probs=40.3
Q ss_pred HHHHHHHHHhhCCCceEEEeeccHHHHHHHhC---------------cccCCCcccCccccCCccccccccccCCCCCCC
Q 022109 203 VSSAATNLQKQLPDLKIVIFDIFKPIYDLVQS---------------PSKSGFVEATRGCCGTGTVETTVFLCNPKSPGT 267 (302)
Q Consensus 203 L~~~l~~l~~~~~~~~i~~~D~~~~~~~v~~n---------------P~~yGf~~~~~~Cc~~g~~~~~~~~c~~~~~~~ 267 (302)
|+-+|+.+++..-+.-++...++..+.+.+.= -.++||.-.. .+.
T Consensus 38 l~l~L~~~k~~g~~~lfVi~PvNg~wydytG~~~~~r~~~y~kI~~~~~~~gf~v~D--------------------~s~ 97 (130)
T PF04914_consen 38 LQLLLDVCKELGIDVLFVIQPVNGKWYDYTGLSKEMRQEYYKKIKYQLKSQGFNVAD--------------------FSD 97 (130)
T ss_dssp HHHHHHHHHHTT-EEEEEE----HHHHHHTT--HHHHHHHHHHHHHHHHTTT--EEE---------------------TT
T ss_pred HHHHHHHHHHcCCceEEEecCCcHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEe--------------------ccc
Confidence 45667777776445567777888887775421 1344542111 001
Q ss_pred CCCCCCceeeCCCChhHHHHHHHHHHHHH
Q 022109 268 CSNASQYVFWDSVHPSQAANQVIADELIV 296 (302)
Q Consensus 268 C~~p~~ylfwD~vHPT~~~h~~iA~~~~~ 296 (302)
+ .-+.|++-|.+||..+|.-.+-+.|.+
T Consensus 98 ~-~y~~yfm~D~iHlgw~GWv~vd~~i~~ 125 (130)
T PF04914_consen 98 D-EYEPYFMQDTIHLGWKGWVYVDQAIYP 125 (130)
T ss_dssp G-TTSTTSBSSSSSB-THHHHHHHHHHHH
T ss_pred C-CCCCceeeecccCchhhHHHHHHHHHH
Confidence 1 136789999999999999888777654
No 48
>cd00384 ALAD_PBGS Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. They either contain a cysteine-rich zinc binding site (consensus DXCXCX(Y/F)X3G(H/Q)CG) or an aspartate-rich magnesium binding site (consensus DXALDX(Y/F)X3G(H/Q)DG). The cyste
Probab=42.89 E-value=48 Score=30.56 Aligned_cols=48 Identities=19% Similarity=0.343 Sum_probs=31.9
Q ss_pred HHHHhcCCceeEEeccCCCCCchhhhhccCCCCCchhHHHHHHHHHHhHHHHHHHHHHHhhCCCc
Q 022109 153 KNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDL 217 (302)
Q Consensus 153 ~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~ 217 (302)
+++.++|.+.|+++++|.. +...+ .+..+ =|.-+++.++.+++++|+.
T Consensus 58 ~~~~~~Gi~~v~LFgv~~~------Kd~~g------s~A~~-----~~g~v~~air~iK~~~p~l 105 (314)
T cd00384 58 EELADLGIRAVILFGIPEH------KDEIG------SEAYD-----PDGIVQRAIRAIKEAVPEL 105 (314)
T ss_pred HHHHHCCCCEEEEECCCCC------CCCCc------ccccC-----CCChHHHHHHHHHHhCCCc
Confidence 7889999999999999642 21111 11111 1345678888899998876
No 49
>PRK13384 delta-aminolevulinic acid dehydratase; Provisional
Probab=42.23 E-value=60 Score=30.05 Aligned_cols=54 Identities=20% Similarity=0.314 Sum_probs=34.9
Q ss_pred HHHHhcCCceeEEeccCCCCCchhhhhccCCCCCchhHHHHHHHHHHhHHHHHHHHHHHhhCCCceEEEeec
Q 022109 153 KNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDI 224 (302)
Q Consensus 153 ~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~ 224 (302)
+.+.++|.+.|+++++|+. +...+ .+..+ =|.-+.+.++.+++++|+.- ++.|+
T Consensus 68 ~~~~~~Gi~~v~lFgv~~~------Kd~~g------s~A~~-----~~g~v~~air~iK~~~pdl~-vi~DV 121 (322)
T PRK13384 68 ERLYALGIRYVMPFGISHH------KDAKG------SDTWD-----DNGLLARMVRTIKAAVPEMM-VIPDI 121 (322)
T ss_pred HHHHHcCCCEEEEeCCCCC------CCCCc------ccccC-----CCChHHHHHHHHHHHCCCeE-EEeee
Confidence 7889999999999999641 22111 11111 14566788899999998763 33343
No 50
>PRK13717 conjugal transfer protein TrbI; Provisional
Probab=41.09 E-value=62 Score=25.77 Aligned_cols=26 Identities=12% Similarity=0.194 Sum_probs=22.3
Q ss_pred hHHHHHHHHHHhHHHHHHHHHHHhhC
Q 022109 189 VSRINTDAQQFNKKVSSAATNLQKQL 214 (302)
Q Consensus 189 ~~~~~~~~~~~N~~L~~~l~~l~~~~ 214 (302)
.+..+.++..||+.|++.|+++++++
T Consensus 70 e~q~e~lt~rF~~aL~~~L~~yq~~H 95 (128)
T PRK13717 70 EAQSKALSARFNTALEASLQAWQQKH 95 (128)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 34567788999999999999999875
No 51
>cd04824 eu_ALAD_PBGS_cysteine_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. The eukaryotic PBGSs represented by this model, which contain a cysteine-rich zinc binding motif (DXCXCX(Y/F)X3G(H/Q)CG), require zinc for their activity, they
Probab=39.24 E-value=71 Score=29.58 Aligned_cols=50 Identities=16% Similarity=0.219 Sum_probs=32.3
Q ss_pred HHHHhcCCceeEEeccCCCC-CchhhhhccCCCCCchhHHHHHHHHHHhHHHHHHHHHHHhhCCCc
Q 022109 153 KNMYGLGARKFGVTSLPPLG-CLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDL 217 (302)
Q Consensus 153 ~~L~~~Gar~~vv~~lpplg-~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~ 217 (302)
+++.++|.+.|+++++|+-. +-+.. + .+. ..=|.-+++.++.+++++|+.
T Consensus 58 ~~~~~~Gi~~v~LFgv~~~~~Kd~~~----g------s~a-----~~~~g~v~~air~iK~~~pdl 108 (320)
T cd04824 58 RPLVAKGLRSVILFGVPLKPGKDDRS----G------SAA-----DDEDGPVIQAIKLIREEFPEL 108 (320)
T ss_pred HHHHHCCCCEEEEeCCCccccCCcCc----c------ccc-----cCCCChHHHHHHHHHHhCCCc
Confidence 78899999999999996421 22220 0 001 112445677888888888876
No 52
>PF08885 GSCFA: GSCFA family; InterPro: IPR014982 This group of proteins are functionally uncharacterised. They have been named GSCFA after a highly conserved N-terminal motif in the alignment, they are functionally uncharacterised.
Probab=39.23 E-value=1.8e+02 Score=26.00 Aligned_cols=82 Identities=12% Similarity=0.122 Sum_probs=43.4
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHhcCCceeEEeccCCCCCchhhhhccCCCCCchhHHHHHHHHHHhHHHHHHHHHHHhhC
Q 022109 135 ISLTQQLQYYREYQSKLAKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQL 214 (302)
Q Consensus 135 ~~l~~Qv~~f~~~~~~l~~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~ 214 (302)
.++.+-++.+.+.. +.|....-+-=+|+++.|+ |..++... .-.-..|..++ ..|+.++.++.+++
T Consensus 145 ls~~ei~~~l~~~~----~~l~~~nP~~kiilTVSPV---rl~~T~~~----~d~~~an~~SK---s~Lr~a~~~l~~~~ 210 (251)
T PF08885_consen 145 LSVEEILEDLEAII----DLLRSINPDIKIILTVSPV---RLIATFRD----RDGLVANQYSK---STLRAAAHELVRAF 210 (251)
T ss_pred CCHHHHHHHHHHHH----HHHHhhCCCceEEEEeccc---hhhccccc----ccchhhhhhhH---HHHHHHHHHHHhcC
Confidence 45555555554443 3344433332345666663 44433221 11122233332 35677788888765
Q ss_pred CCceEEEeeccHHHHHHH
Q 022109 215 PDLKIVIFDIFKPIYDLV 232 (302)
Q Consensus 215 ~~~~i~~~D~~~~~~~v~ 232 (302)
.++.||-.|.++++-+
T Consensus 211 --~~v~YFPSYEiv~d~l 226 (251)
T PF08885_consen 211 --DDVDYFPSYEIVMDEL 226 (251)
T ss_pred --CCceEcchHhhccCcc
Confidence 4689999998888644
No 53
>PRK09283 delta-aminolevulinic acid dehydratase; Validated
Probab=38.70 E-value=77 Score=29.43 Aligned_cols=54 Identities=24% Similarity=0.345 Sum_probs=34.5
Q ss_pred HHHHhcCCceeEEeccCCCCCchhhhhccCCCCCchhHHHHHHHHHHhHHHHHHHHHHHhhCCCceEEEeec
Q 022109 153 KNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDI 224 (302)
Q Consensus 153 ~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~ 224 (302)
+++.++|.+.|+++++|. .+...+ .+..+. |.-+.+.++.+++++|+. ++..|+
T Consensus 66 ~~~~~~Gi~av~LFgv~~------~Kd~~g------s~A~~~-----~g~v~rair~iK~~~p~l-~vi~DV 119 (323)
T PRK09283 66 EEAVELGIPAVALFGVPE------LKDEDG------SEAYNP-----DGLVQRAIRAIKKAFPEL-GVITDV 119 (323)
T ss_pred HHHHHCCCCEEEEeCcCC------CCCccc------ccccCC-----CCHHHHHHHHHHHhCCCc-EEEEee
Confidence 788999999999999843 222111 111111 445678888999999876 344443
No 54
>cd04823 ALAD_PBGS_aspartate_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. All of PBGS_aspartate_rich contain an aspartate rich metal binding site with the general sequence DXALDX(Y/F)X3G(H/Q)DG. They also contain an allosteric magnesiu
Probab=37.24 E-value=77 Score=29.35 Aligned_cols=56 Identities=21% Similarity=0.370 Sum_probs=34.4
Q ss_pred HHHHhcCCceeEEeccCCCCCchhhhhccCCCCCchhHHHHHHHHHHhHHHHHHHHHHHhhCCCceEEEeec
Q 022109 153 KNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDI 224 (302)
Q Consensus 153 ~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~ 224 (302)
+.+.++|.+.|++++++| |..+...+ .+..+ =|.-+.+.++.+++++|+. +++.|+
T Consensus 61 ~~~~~~Gi~~v~lFgv~~----~~~KD~~g------s~A~~-----~~g~v~~air~iK~~~p~l-~vi~DV 116 (320)
T cd04823 61 EEAVDLGIPAVALFPVTP----PELKSEDG------SEAYN-----PDNLVCRAIRAIKEAFPEL-GIITDV 116 (320)
T ss_pred HHHHHcCCCEEEEecCCC----cccCCccc------ccccC-----CCChHHHHHHHHHHhCCCc-EEEEee
Confidence 788999999999999843 11121111 11111 1345678888899999876 334443
No 55
>COG3581 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=35.75 E-value=62 Score=30.90 Aligned_cols=48 Identities=21% Similarity=0.378 Sum_probs=34.9
Q ss_pred HHHHhcCCceeEEeccCCCCCchhhhhccCCCCCchhHHHHHHHHHHhHHHHHHHHHHHhhCCCceEEEeecc
Q 022109 153 KNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIF 225 (302)
Q Consensus 153 ~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~ 225 (302)
-.+++.|+..++ -+-|.||.|.-... +-++.++++++|+++++-+|..
T Consensus 326 ~e~i~~g~~nvI--clqPFGCmPnhI~~-----------------------kgm~k~lk~~~p~ani~aVd~d 373 (420)
T COG3581 326 LELIESGVDNVI--CLQPFGCMPNHIVS-----------------------KGMIKGLKRDKPKANIAAVDYD 373 (420)
T ss_pred HHHHHcCCCceE--EecCccCCcHHHHH-----------------------HHHHHHHHhcCCCCceEEeecC
Confidence 455667877775 47799999954321 3567788889999988888765
No 56
>PF00490 ALAD: Delta-aminolevulinic acid dehydratase; InterPro: IPR001731 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway []. The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin []. The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) []. This entry represents porphobilinogen (PBG) synthase (PBGS, or 5-aminoaevulinic acid dehydratase, or ALAD, 4.2.1.24 from EC), which functions during the second stage of tetrapyrrole biosynthesis. This enzyme catalyses a Knorr-type condensation reaction between two molecules of ALA to generate porphobilinogen, the pyrrolic building block used in later steps []. The structure of the enzyme is based on a TIM barrel topology made up of eight identical subunits, where each subunit binds to a metal ion that is essential for activity, usually zinc (in yeast, mammals and certain bacteria) or magnesium (in plants and other bacteria). A lysine has been implicated in the catalytic mechanism []. The lack of PBGS enzyme causes a rare porphyric disorder known as ALAD porphyria, which appears to involve conformational changes in the enzyme [.; GO: 0004655 porphobilinogen synthase activity, 0046872 metal ion binding, 0033014 tetrapyrrole biosynthetic process; PDB: 2C1H_A 1W1Z_A 1GZG_B 1W5O_B 1W5Q_B 2C18_A 1B4K_A 2C19_B 1W56_B 2C13_B ....
Probab=34.66 E-value=96 Score=28.81 Aligned_cols=56 Identities=27% Similarity=0.372 Sum_probs=32.9
Q ss_pred HHHHhcCCceeEEeccCCCCCchhhhhccCCCCCchhHHHHHHHHHHhHHHHHHHHHHHhhCCCceEEEeec
Q 022109 153 KNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDI 224 (302)
Q Consensus 153 ~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~ 224 (302)
+++.++|.+.|+++++.+ |..+...+ .+..+ =|.-+.+.++.+++.+|+. ++..|+
T Consensus 64 ~~~~~~GI~~v~lFgvi~----~~~Kd~~g------s~a~~-----~~g~v~~air~iK~~~pdl-~vi~Dv 119 (324)
T PF00490_consen 64 EEAVDLGIRAVILFGVID----PSKKDEEG------SEAYN-----PDGLVQRAIRAIKKAFPDL-LVITDV 119 (324)
T ss_dssp HHHHHTT--EEEEEEE-S----CSC-BSS-------GGGGS-----TTSHHHHHHHHHHHHSTTS-EEEEEE
T ss_pred HHHHHCCCCEEEEEeeCC----cccCCcch------hcccC-----CCChHHHHHHHHHHhCCCc-EEEEec
Confidence 788899999999999833 33332211 11111 2445678889999999986 444443
No 57
>KOG3670 consensus Phospholipase [Lipid transport and metabolism]
Probab=32.44 E-value=38 Score=32.25 Aligned_cols=30 Identities=23% Similarity=0.211 Sum_probs=26.3
Q ss_pred CCCceeeCCCChhHHHHHHHHHHHHHhccC
Q 022109 271 ASQYVFWDSVHPSQAANQVIADELIVQGFA 300 (302)
Q Consensus 271 p~~ylfwD~vHPT~~~h~~iA~~~~~~~~~ 300 (302)
+..++--|-.|.++.+|.++|+++|+...+
T Consensus 323 d~~ffa~DcfHlS~~GHa~~ak~lWNnl~e 352 (397)
T KOG3670|consen 323 DLTFFAPDCFHLSQRGHAIAAKHLWNNLFE 352 (397)
T ss_pred CchhcccCccccchHHHHHHHHHHHHHhhc
Confidence 456777899999999999999999988765
No 58
>PF08331 DUF1730: Domain of unknown function (DUF1730); InterPro: IPR013542 This domain of unknown function occurs in iron-sulphur cluster-binding proteins together with the 4Fe-4S binding domain (IPR001450 from INTERPRO).
Probab=32.19 E-value=1e+02 Score=22.07 Aligned_cols=66 Identities=23% Similarity=0.262 Sum_probs=30.7
Q ss_pred hcCCceeEEeccCCCCCchhhhhccCCCCCchhHHHHHH---HHHHhHHHHHHHHHHHhhCCCceE-EEee
Q 022109 157 GLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTD---AQQFNKKVSSAATNLQKQLPDLKI-VIFD 223 (302)
Q Consensus 157 ~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~---~~~~N~~L~~~l~~l~~~~~~~~i-~~~D 223 (302)
--|||.||++.++=....|....... ...+..+....- -...-++|++.++.|+++.|+.+. .++|
T Consensus 8 ~p~arSvIv~a~~Y~~~~~~~~~~~~-~~~g~iarYA~G~DYH~vlk~~L~~l~~~i~~~~~~~~~r~~VD 77 (78)
T PF08331_consen 8 LPGARSVIVLAFPYYPEPPPPPPPPG-PGRGRIARYAWGRDYHKVLKKKLEQLAEWIRELGPDFEYRIFVD 77 (78)
T ss_pred CCCCcEEEEEEccCCCccccccccCC-CCCeeEeehhccCChHHHHHHHHHHHHHHHHHHCCCCCeEEeec
Confidence 35999999998864331111111100 012222222211 122334555666667777777543 3444
No 59
>TIGR02744 TrbI_Ftype type-F conjugative transfer system protein TrbI. This protein is an essential component of the F-type conjugative transfer sytem for plasmid DNA transfer and has been shown to be localized to the periplasm.
Probab=31.97 E-value=1.1e+02 Score=23.94 Aligned_cols=26 Identities=15% Similarity=0.102 Sum_probs=22.6
Q ss_pred hHHHHHHHHHHhHHHHHHHHHHHhhC
Q 022109 189 VSRINTDAQQFNKKVSSAATNLQKQL 214 (302)
Q Consensus 189 ~~~~~~~~~~~N~~L~~~l~~l~~~~ 214 (302)
.+..+.++..||+.|++.|+++++++
T Consensus 57 e~q~~~~~~rF~~~L~~~L~~yq~~H 82 (112)
T TIGR02744 57 EAQQKALLGRFNALLEAELQAWQAQH 82 (112)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 45567789999999999999999886
No 60
>PF09677 TrbI_Ftype: Type-F conjugative transfer system protein (TrbI_Ftype); InterPro: IPR014115 This entry represents TrbI, an essential component of the F-type conjugative transfer system for plasmid DNA transfer that has been shown to be localized to the periplasm [, ].
Probab=25.75 E-value=1.5e+02 Score=22.99 Aligned_cols=25 Identities=12% Similarity=0.263 Sum_probs=21.1
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHhhC
Q 022109 190 SRINTDAQQFNKKVSSAATNLQKQL 214 (302)
Q Consensus 190 ~~~~~~~~~~N~~L~~~l~~l~~~~ 214 (302)
+.....+..||+.|+..|.++++++
T Consensus 57 ~q~~a~t~~F~~aL~~~L~~~~~~h 81 (111)
T PF09677_consen 57 EQVEALTQRFMQALEASLAEYQAEH 81 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 4556678999999999999998864
No 61
>cd03414 CbiX_SirB_C Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), C-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both CbiX and SirB are found in a wide range of bacteria.
Probab=25.30 E-value=1.8e+02 Score=22.00 Aligned_cols=45 Identities=22% Similarity=0.364 Sum_probs=28.4
Q ss_pred HHHHhcCCceeEEeccCCCCCchhhhhccCCCCCchhHHHHHHHHHHhHHHHHHHHHHHhhCCCceEEEe
Q 022109 153 KNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIF 222 (302)
Q Consensus 153 ~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~ 222 (302)
++|.+.|.++++| .|.++... . |...+...+++++++ |+.+|.+.
T Consensus 52 ~~l~~~g~~~i~v--------vP~fL~~G---------------~-h~~~i~~~~~~~~~~-~~~~i~~~ 96 (117)
T cd03414 52 ERLRALGARRVVV--------LPYLLFTG---------------V-LMDRIEEQVAELAAE-PGIEFVLA 96 (117)
T ss_pred HHHHHcCCCEEEE--------EechhcCC---------------c-hHHHHHHHHHHHHhC-CCceEEEC
Confidence 5666789999987 46665431 1 112355667777776 77777654
No 62
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=24.69 E-value=29 Score=29.66 Aligned_cols=16 Identities=44% Similarity=0.607 Sum_probs=13.2
Q ss_pred CCEEEEcCCCcccCCC
Q 022109 35 VPAIITFGDSAVDVGN 50 (302)
Q Consensus 35 ~~~l~vFGDSlsD~Gn 50 (302)
...+++||||.+|..=
T Consensus 202 ~~~~~~~GD~~ND~~M 217 (254)
T PF08282_consen 202 PEDIIAFGDSENDIEM 217 (254)
T ss_dssp GGGEEEEESSGGGHHH
T ss_pred cceeEEeecccccHhH
Confidence 3679999999999743
No 63
>COG0113 HemB Delta-aminolevulinic acid dehydratase [Coenzyme metabolism]
Probab=24.40 E-value=79 Score=29.19 Aligned_cols=50 Identities=18% Similarity=0.284 Sum_probs=32.3
Q ss_pred HHHHhcCCceeEEeccCCCCCchhhhhccCCCCCchhHHHHHHHHHHhHHHHHHHHHHHhhCCCc
Q 022109 153 KNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDL 217 (302)
Q Consensus 153 ~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~ 217 (302)
+.+.++|.+-|+++++|+- ..+...++ .+-.-|.-+++.++.+++.+|+.
T Consensus 68 ~~~~~lGi~av~LFgvp~~----~~Kd~~gs-----------~A~~~~givqravr~ik~~~p~l 117 (330)
T COG0113 68 EELVDLGIPAVILFGVPDD----SKKDETGS-----------EAYDPDGIVQRAVRAIKEAFPEL 117 (330)
T ss_pred HHHHhcCCCEEEEeCCCcc----cccCcccc-----------cccCCCChHHHHHHHHHHhCCCe
Confidence 7889999999999999852 22222110 01112345677888888888854
No 64
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=23.68 E-value=40 Score=30.05 Aligned_cols=18 Identities=22% Similarity=0.279 Sum_probs=14.6
Q ss_pred CCCEEEEcCCCcccCCCC
Q 022109 34 LVPAIITFGDSAVDVGNN 51 (302)
Q Consensus 34 ~~~~l~vFGDSlsD~Gn~ 51 (302)
....+++||||.+|.-=.
T Consensus 205 ~~~~viafGDs~NDi~Ml 222 (271)
T PRK03669 205 TRPTTLGLGDGPNDAPLL 222 (271)
T ss_pred CCceEEEEcCCHHHHHHH
Confidence 357899999999997543
No 65
>COG1209 RfbA dTDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]
Probab=22.15 E-value=2.6e+02 Score=25.52 Aligned_cols=82 Identities=18% Similarity=0.303 Sum_probs=48.4
Q ss_pred HHHHhcCCceeEEeccCCCCCchhhhhccCC--------------CCCchhHHHH---HHHH-----------HHhHHHH
Q 022109 153 KNMYGLGARKFGVTSLPPLGCLPAARTLFGY--------------HESGCVSRIN---TDAQ-----------QFNKKVS 204 (302)
Q Consensus 153 ~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~--------------~~~~~~~~~~---~~~~-----------~~N~~L~ 204 (302)
.+|..+|.|.|+|..-|- ..|.++...+. ...+...++- +.+. .|-..|.
T Consensus 39 ~~L~~aGI~dI~II~~~~--~~~~~~~llGdgs~~gv~itY~~Q~~p~GlA~Av~~a~~fv~~~~f~l~LGDNi~~~~l~ 116 (286)
T COG1209 39 ETLMLAGIRDILIVVGPE--DKPTFKELLGDGSDFGVDITYAVQPEPDGLAHAVLIAEDFVGDDDFVLYLGDNIFQDGLS 116 (286)
T ss_pred HHHHHcCCceEEEEecCC--chhhhhhhhcCccccCcceEEEecCCCCcHHHHHHHHHhhcCCCceEEEecCceeccChH
Confidence 788999999999988772 23444433221 0112222111 0110 1122677
Q ss_pred HHHHHHHhhCCCceEEEeeccHHHHHHHhCcccCCCcccC
Q 022109 205 SAATNLQKQLPDLKIVIFDIFKPIYDLVQSPSKSGFVEAT 244 (302)
Q Consensus 205 ~~l~~l~~~~~~~~i~~~D~~~~~~~v~~nP~~yGf~~~~ 244 (302)
+.++.+.++-+|+.|...-+ +||.+||-.+..
T Consensus 117 ~~~~~~~~~~~ga~i~~~~V--------~dP~rfGV~e~d 148 (286)
T COG1209 117 ELLEHFAEEGSGATILLYEV--------DDPSRYGVVEFD 148 (286)
T ss_pred HHHHHHhccCCCcEEEEEEc--------CCcccceEEEEc
Confidence 88888887777888877744 499999965433
No 66
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=21.50 E-value=49 Score=29.17 Aligned_cols=18 Identities=22% Similarity=0.290 Sum_probs=15.2
Q ss_pred CCEEEEcCCCcccCCCCC
Q 022109 35 VPAIITFGDSAVDVGNNN 52 (302)
Q Consensus 35 ~~~l~vFGDSlsD~Gn~~ 52 (302)
...+++||||.+|..=..
T Consensus 194 ~~~~~a~GD~~ND~~Ml~ 211 (256)
T TIGR01486 194 AIKVVGLGDSPNDLPLLE 211 (256)
T ss_pred CceEEEEcCCHhhHHHHH
Confidence 678999999999987653
No 67
>PF06812 ImpA-rel_N: ImpA-related N-terminal; InterPro: IPR010657 This entry represents a conserved region located towards the N-terminal end of ImpA and related proteins. ImpA is an inner membrane protein, which has been suggested to be involved with proteins that are exported and associated with colony variations in Actinobacillus actinomycetemcomitans []. Note that many members are hypothetical proteins.
Probab=21.00 E-value=35 Score=23.30 Aligned_cols=8 Identities=63% Similarity=1.738 Sum_probs=6.7
Q ss_pred eeCCCChh
Q 022109 276 FWDSVHPS 283 (302)
Q Consensus 276 fwD~vHPT 283 (302)
|||.+||.
T Consensus 53 ~W~~l~P~ 60 (62)
T PF06812_consen 53 YWDSLHPQ 60 (62)
T ss_pred CCcccCCC
Confidence 68999985
No 68
>PF11131 PhrC_PhrF: Rap-phr extracellular signalling
Probab=20.95 E-value=1e+02 Score=18.80 Aligned_cols=20 Identities=40% Similarity=0.541 Sum_probs=10.0
Q ss_pred chhHHH-HHHHHHHHhhcccc
Q 022109 9 KTVLFV-VLAFALALASKGYA 28 (302)
Q Consensus 9 ~~~~~~-~~~~~~~~~~~~~~ 28 (302)
|+.|++ +|+......+++.+
T Consensus 2 KsKl~l~CLA~aavF~~a~va 22 (37)
T PF11131_consen 2 KSKLFLICLAAAAVFTAAGVA 22 (37)
T ss_pred chhHHHHHHHHHHHHHhhccc
Confidence 455555 45554455555443
No 69
>PRK03437 3-isopropylmalate dehydrogenase; Provisional
Probab=20.58 E-value=1.2e+02 Score=28.56 Aligned_cols=36 Identities=14% Similarity=0.235 Sum_probs=29.9
Q ss_pred HHHHHHHHhhCCCceEEEeeccHHHHHHHhCcccCC
Q 022109 204 SSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPSKSG 239 (302)
Q Consensus 204 ~~~l~~l~~~~~~~~i~~~D~~~~~~~v~~nP~~yG 239 (302)
++..++..++||++++-..=+....+.++.+|..|.
T Consensus 198 ~~~~~eva~~ypdV~~~~~~vDa~~~~Lv~~P~~fD 233 (344)
T PRK03437 198 QRTVDEVAAEYPDVTVDYQHVDAATIFMVTDPSRFD 233 (344)
T ss_pred HHHHHHHHhhCCCceEeehhHHHHHHHHhcCcccCc
Confidence 455567778899998888878888899999999997
No 70
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=20.11 E-value=45 Score=28.48 Aligned_cols=17 Identities=18% Similarity=0.147 Sum_probs=13.5
Q ss_pred CCCEEEEcCCCcccCCC
Q 022109 34 LVPAIITFGDSAVDVGN 50 (302)
Q Consensus 34 ~~~~l~vFGDSlsD~Gn 50 (302)
.-..+++||||.+|.-=
T Consensus 194 ~~~~vi~~GD~~NDi~m 210 (221)
T TIGR02463 194 PDVKTLGLGDGPNDLPL 210 (221)
T ss_pred CCCcEEEECCCHHHHHH
Confidence 34679999999999654
Done!