Query 022110
Match_columns 302
No_of_seqs 176 out of 695
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 14:09:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022110.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022110hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2cw9_A Translocase of inner mi 100.0 4.4E-31 1.5E-35 234.4 19.3 150 142-300 32-186 (194)
2 3qk9_A Mitochondrial import in 99.9 7.5E-27 2.6E-31 211.4 16.0 148 144-300 57-214 (222)
3 3fka_A Uncharacterized NTF-2 l 89.0 2 6.9E-05 33.8 8.5 91 169-300 11-116 (120)
4 3duk_A NTF2-like protein of un 85.7 10 0.00034 29.9 10.9 92 169-300 14-120 (125)
5 3blz_A NTF2-like protein of un 85.4 8.8 0.0003 29.8 10.4 30 168-197 13-42 (128)
6 3gwr_A Putative calcium/calmod 82.0 11 0.00039 30.3 9.9 28 168-195 9-36 (144)
7 2ux0_A Calcium-calmodulin depe 77.2 23 0.0008 27.4 12.3 29 167-195 13-41 (143)
8 4hyz_A Uncharacterized protein 76.6 25 0.00086 27.5 11.8 39 158-200 9-47 (114)
9 2rcd_A Uncharacterized protein 67.9 38 0.0013 25.9 11.1 30 166-195 13-42 (129)
10 3gzr_A Uncharacterized protein 67.5 44 0.0015 26.6 9.8 29 168-196 7-35 (146)
11 3dmc_A NTF2-like protein; stru 58.7 4.2 0.00014 32.3 1.9 33 164-196 9-41 (134)
12 3ksp_A Calcium/calmodulin-depe 58.5 65 0.0022 25.7 9.1 100 171-298 13-120 (129)
13 3cnx_A Uncharacterized protein 57.9 82 0.0028 26.3 14.3 30 168-197 13-42 (170)
14 4i4k_A Uncharacterized protein 55.7 73 0.0025 25.0 10.8 29 168-196 20-48 (143)
15 3hx8_A MLR2180 protein, putati 53.1 65 0.0022 23.7 13.3 31 166-196 5-35 (129)
16 3bb9_A Putative orphan protein 52.5 80 0.0027 24.5 11.0 30 167-196 30-59 (148)
17 3fsd_A NTF2-like protein of un 50.3 83 0.0029 24.1 11.6 29 168-196 15-43 (134)
18 3h3h_A Uncharacterized snoal-l 49.2 6.4 0.00022 30.1 1.5 29 167-195 8-36 (122)
19 3f40_A Uncharacterized NTF2-li 48.6 5.9 0.0002 30.6 1.2 28 169-196 8-35 (114)
20 3fgy_A Uncharacterized NTF2-li 47.9 6.3 0.00021 30.3 1.3 29 168-196 6-34 (135)
21 3f7s_A Uncharacterized NTF2-li 47.1 93 0.0032 23.7 12.7 28 168-195 9-36 (142)
22 1ohp_A Steroid delta-isomerase 44.3 7.1 0.00024 28.8 1.0 29 168-196 6-34 (125)
23 3u7d_B Protein HEG homolog 1; 43.0 7.3 0.00025 22.8 0.7 17 48-64 3-19 (26)
24 1tuh_A BAL32A, hypothetical pr 42.5 8.6 0.0003 30.6 1.3 28 168-195 30-57 (156)
25 3i0y_A Putative polyketide cyc 42.3 8 0.00028 29.7 1.1 28 169-196 10-37 (140)
26 3g0k_A Putative membrane prote 42.2 50 0.0017 26.3 6.0 30 167-196 27-57 (148)
27 3ebt_A Uncharacterized NTF2-li 42.0 8.4 0.00029 29.3 1.1 29 168-196 4-32 (132)
28 3en8_A Uncharacterized NTF-2 l 41.5 7.6 0.00026 30.5 0.8 29 168-196 6-34 (128)
29 3fh1_A Uncharacterized NTF2-li 39.9 7.7 0.00026 29.9 0.6 30 167-196 17-46 (129)
30 3ehc_A Snoal-like polyketide c 38.6 24 0.00083 26.8 3.4 28 169-196 5-32 (128)
31 2v2f_A Penicillin binding prot 38.5 8.4 0.00029 22.3 0.5 15 254-268 4-18 (26)
32 1oh0_A Steroid delta-isomerase 37.9 22 0.00075 26.6 3.0 30 167-196 7-36 (131)
33 3ec9_A Uncharacterized NTF2-li 37.3 10 0.00035 29.3 1.0 30 168-197 13-42 (140)
34 2bng_A MB2760; epoxide hydrola 36.3 13 0.00045 29.2 1.5 29 168-196 16-44 (149)
35 2gex_A SNOL; alpha+beta barrel 35.6 14 0.00047 29.2 1.5 30 167-196 4-33 (152)
36 3dm8_A Uncharacterized protein 35.4 9.2 0.00031 30.2 0.4 28 169-196 6-33 (143)
37 2r4i_A Uncharacterized protein 35.2 21 0.00073 26.4 2.5 30 167-196 6-35 (123)
38 1nww_A Limonene-1,2-epoxide hy 35.2 13 0.00045 29.0 1.3 27 170-196 25-51 (149)
39 3f7x_A Putative polyketide cyc 34.7 12 0.0004 30.1 0.9 29 169-197 22-50 (151)
40 1s5a_A Hypothetical protein YE 33.2 14 0.00048 28.6 1.1 29 168-196 11-39 (150)
41 2r25_A Phosphorelay intermedia 31.9 52 0.0018 27.9 4.6 36 158-193 25-64 (167)
42 3ff2_A Uncharacterized cystati 31.6 26 0.00089 26.2 2.5 27 170-196 5-31 (117)
43 2f86_B Hypothetical protein K1 31.3 29 0.00099 28.0 2.8 30 168-197 13-42 (143)
44 1z1s_A Hypothetical protein PA 31.2 16 0.00054 29.5 1.2 29 169-197 25-53 (163)
45 3d9r_A Ketosteroid isomerase-l 31.1 36 0.0012 25.5 3.2 29 168-196 12-40 (135)
46 2k54_A Protein ATU0742; protei 30.5 31 0.0011 25.9 2.8 29 168-196 4-32 (123)
47 3g8z_A Protein of unknown func 30.4 15 0.0005 29.2 0.8 29 168-196 21-49 (148)
48 2gey_A ACLR protein; alpha+bet 28.4 18 0.0006 28.9 1.0 28 168-195 5-32 (158)
49 3g16_A Uncharacterized protein 28.2 21 0.00073 29.6 1.5 30 168-197 11-40 (156)
50 2a15_A Hypothetical protein RV 27.1 22 0.00076 27.2 1.4 29 168-196 8-36 (139)
51 3mso_A Steroid delta-isomerase 26.9 11 0.00038 30.2 -0.5 30 167-196 9-38 (143)
52 3f14_A Uncharacterized NTF2-li 24.7 22 0.00074 26.8 0.8 26 171-196 4-29 (112)
53 2a0b_A HPT domain; sensory tra 23.8 95 0.0032 23.9 4.5 29 163-191 34-62 (125)
54 4h3u_A Hypothetical protein; s 23.6 21 0.00072 28.4 0.6 26 171-196 29-54 (158)
55 3f8x_A Putative delta-5-3-keto 23.1 15 0.00051 30.0 -0.4 32 165-196 18-49 (148)
56 3flj_A Uncharacterized protein 22.5 10 0.00035 31.7 -1.6 32 165-196 16-47 (155)
57 2owp_A Hypothetical protein BX 21.5 63 0.0022 25.3 3.1 33 164-196 8-40 (129)
58 1sjw_A Nogalonic acid methyl e 20.7 11 0.00038 29.1 -1.6 29 168-196 3-31 (144)
No 1
>2cw9_A Translocase of inner mitochondrial membrane; structure genomics, TIM, structural genomics, NPPFSA, riken structural genomics/proteomics initiative; HET: 1PE; 1.90A {Homo sapiens} SCOP: d.17.4.13
Probab=99.97 E-value=4.4e-31 Score=234.41 Aligned_cols=150 Identities=17% Similarity=0.260 Sum_probs=131.1
Q ss_pred HHHHHhHHHHHHHHHh--CCCChHHHHHHHHHH-HHHHHHHHHcCCHHHHHHhhcHHHHHHHHHHHHHHhccCCceeeee
Q 022110 142 IILELKSAYAIAKLRK--SGYSKQKFYTEAVDL-YKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWEL 218 (302)
Q Consensus 142 l~~~~ks~~al~kir~--p~F~~~~F~~~Ak~i-y~~I~eA~a~gD~~~Lr~lvTe~~y~~l~~~Ik~R~~~g~tv~W~~ 218 (302)
+..+.+++.+|++|++ |+||++.|+++|+++ |.+|++||++||++.|++||||+||+.|++++++|+.+|.++++++
T Consensus 32 ~f~~s~~~~~l~~i~~~dp~Fd~~~Fl~~ak~~iy~~Iq~A~~~gD~~~Lr~~~t~~~~~~~~~~i~~r~~~g~~~~~~~ 111 (194)
T 2cw9_A 32 LFSKTEMSEVLTEILRVDPAFDKDRFLKQCENDIIPNVLEAMISGELDILKDWCYEATYSQLAHPIQQAKALGLQFHSRI 111 (194)
T ss_dssp TTHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTHHHHHHHHHHHTCHHHHHHHBCHHHHHHHHHHHHHHHHTTCEECCEE
T ss_pred ccCCCHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHhcCHHHHHHHHHHHHHHHHCCCccccEE
Confidence 4567788999999998 999999999999998 8999999999999999999999999999999999999998777766
Q ss_pred ecccccceEEEEEEeeeeccccCCcEEEEEEEEEeEEeeEEEcCCCceecCCCCCeeeeeEEEEEEEeCCCCCCC--eEE
Q 022110 219 IEPIIKMRTLRARLIGVDRNDLNKVFVQLTLEFLAKQKFEAYDSKGVTVAGDKTKEVLVRDIWVFEKSLFHPGAY--WRL 296 (302)
Q Consensus 219 ve~le~~rvv~arli~i~~~~~~~~~~QVTVRF~s~Q~lavyD~~GrlV~G~~d~~~dV~EyWVFeR~l~~~~~~--WrL 296 (302)
|. +.++.++++.. .+..+++||+|+++|+++++|++|++|+|+++.+.+|.|+|+|+|+++..+++ |+|
T Consensus 112 v~------i~~~el~~a~~---~~~~~~itV~f~~~~i~~~rd~~G~vveG~~~~~~~v~e~W~f~R~~~~~~p~~~W~L 182 (194)
T 2cw9_A 112 LD------IDNVDLAMGKM---VEQGPVLIITFQAQLVMVVRNPKGEVVEGDPDKVLRMLYVWALCRDQDELNPYAAWRL 182 (194)
T ss_dssp EE------EEEEEEEEEEE---ETTEEEEEEEEEEEEECEEECTTSCEEEECTTCCEEEEEEEEEEECTTCSCGGGCEEE
T ss_pred EE------ecccEEEEEEE---eCCeeEEEEEEEEEEEEEEECCCCCEecCCCCCceEEEEEEEEEEeCCCCCCCCCEEE
Confidence 43 23344444332 24679999999999999999999999999999999999999999999876654 999
Q ss_pred EEEe
Q 022110 297 CGRI 300 (302)
Q Consensus 297 ~gki 300 (302)
+|.=
T Consensus 183 ~~iq 186 (194)
T 2cw9_A 183 LDIS 186 (194)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 9863
No 2
>3qk9_A Mitochondrial import inner membrane translocase S TIM44; mitochondrion, protein transport; 3.10A {Saccharomyces cerevisiae} PDB: 2fxt_A
Probab=99.94 E-value=7.5e-27 Score=211.42 Aligned_cols=148 Identities=17% Similarity=0.173 Sum_probs=120.5
Q ss_pred HHHhHHHHHHHHHh--CCCChHHHHHHHHHH-HHHHHHHHHcCCHHHHHHhhcHHHHHHHHHHHHHHhccCCceeeeeec
Q 022110 144 LELKSAYAIAKLRK--SGYSKQKFYTEAVDL-YKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWELIE 220 (302)
Q Consensus 144 ~~~ks~~al~kir~--p~F~~~~F~~~Ak~i-y~~I~eA~a~gD~~~Lr~lvTe~~y~~l~~~Ik~R~~~g~tv~W~~ve 220 (302)
.....+.+|++|++ |+|++..|+++|+++ |++|++||++||.+.|++|||+++|+.|.+.|++|+..|.++.
T Consensus 57 ~~te~a~~l~~Ik~~DPsF~~~~Fl~~a~~ai~p~Il~Af~~GD~~~Lk~llse~~y~~f~~~i~~r~~~G~~~d----- 131 (222)
T 3qk9_A 57 AETESSRVYSQFKLMDPTFSNESFTRHLREYIVPEILEAYVKGDVKVLKKWFSEAPFNVYAAQQKIFKEQDVYAD----- 131 (222)
T ss_dssp ---CCHHHHTTCC-----CCHHHHHHHHHHTHHHHHHHHHHHTCHHHHHHHBCHHHHHHHHHHHHHHHTTTEEEC-----
T ss_pred CCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHcCCHHHHHhhcCHHHHHHHHHHHHHHHHCCCEee-----
Confidence 34555778888887 999999999999988 5789999999999999999999999999999999999987544
Q ss_pred ccccceEEEEEEeeeeccccC--CcEEEEEEEEEeEEeeEEEc-CCCceecCCCCCeeeeeEEEEEEEeCCCCC----CC
Q 022110 221 PIIKMRTLRARLIGVDRNDLN--KVFVQLTLEFLAKQKFEAYD-SKGVTVAGDKTKEVLVRDIWVFEKSLFHPG----AY 293 (302)
Q Consensus 221 ~le~~rvv~arli~i~~~~~~--~~~~QVTVRF~s~Q~lavyD-~~GrlV~G~~d~~~dV~EyWVFeR~l~~~~----~~ 293 (302)
.++|+++=++|..+++. +..++|||+|.++|+.+++| +.|+||+|+++++..+.|+|+|+|+++..+ ++
T Consensus 132 ----~~il~I~~vdI~~a~~~~~~~~p~itV~f~aq~i~~~rd~k~GeVVeGd~d~i~~~~~~WtF~R~~~~~d~~~tp~ 207 (222)
T 3qk9_A 132 ----GRILDIRGVEIVSAKLLAPQDIPVLVVGCRAQEINLYRKKKTGEIAAGDEANILMSSYAMVFTRDPEQIDDDETEG 207 (222)
T ss_dssp ----CEEEEEEEEEEEEEEECSSSCCEEEEEEEEEEEECCEEESTTCCCSSSCTTCCEEEEEEEEEEECCC--------C
T ss_pred ----eeEeeecceEEEEEEEecCCCceEEEEEEEEEEEEEEEeCCCCccccCCCCCceEEEEEEEEEEcCccCCCCCCCC
Confidence 34455554555544444 48899999999999999999 889999999999999999999999997544 78
Q ss_pred eEEEEEe
Q 022110 294 WRLCGRI 300 (302)
Q Consensus 294 WrL~gki 300 (302)
|+|.+.-
T Consensus 208 WkL~eiq 214 (222)
T 3qk9_A 208 WKILEFV 214 (222)
T ss_dssp EEEEEEE
T ss_pred cEEehhh
Confidence 9999853
No 3
>3fka_A Uncharacterized NTF-2 like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.69A {Silicibacter pomeroyi dss-3}
Probab=88.96 E-value=2 Score=33.82 Aligned_cols=91 Identities=15% Similarity=0.179 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHhhcHHH--------------HHHHHHHHHHHhcc-CCceeeeeecccccceEEEEEEe
Q 022110 169 AVDLYKEINTLMANGDKTSLRKAVTEKM--------------YSALKNEIKQRESM-WSSVNWELIEPIIKMRTLRARLI 233 (302)
Q Consensus 169 Ak~iy~~I~eA~a~gD~~~Lr~lvTe~~--------------y~~l~~~Ik~R~~~-g~tv~W~~ve~le~~rvv~arli 233 (302)
.+++...-.+++.+||.+.|+...+|++ .+++.. +...+.. +... ..+++. +
T Consensus 11 I~~~l~~Y~~g~~~~D~~~l~~~FhpdA~~~~~~~g~~~~~~~~~~~~-v~~~p~~~~~~~---------~~~i~~---I 77 (120)
T 3fka_A 11 LTALVETYVMAMTRGDRPALERIFFGKASEVGHYEGELLWNSRDAFIA-MCEDAADAETDP---------FWAISS---V 77 (120)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHEEEEEEEEEEETTEEEEEEHHHHHH-HHHHHCCSSCCC---------CEEEEE---E
T ss_pred HHHHHHHHHHHHHhcCHHHHHhhCCCCeEEEEecCCcEEEcCHHHHHh-hcCCccCCCCCc---------eEEEEE---E
Confidence 3444556677889999999999999887 456666 6532211 1110 111222 2
Q ss_pred eeeccccCCcEEEEEEEEEeEEeeEEEcCCCceecCCCCCeeeeeEEEEEEEeCCCCCCCeEEEEEe
Q 022110 234 GVDRNDLNKVFVQLTLEFLAKQKFEAYDSKGVTVAGDKTKEVLVRDIWVFEKSLFHPGAYWRLCGRI 300 (302)
Q Consensus 234 ~i~~~~~~~~~~QVTVRF~s~Q~lavyD~~GrlV~G~~d~~~dV~EyWVFeR~l~~~~~~WrL~gki 300 (302)
+| .++.|.+.|.+. + . ...++|+.+|.|. ++.|+|..|+
T Consensus 78 ~i-----~gd~A~a~v~~~-------~-------~-----~~~f~D~~~L~k~----dg~WkIv~K~ 116 (120)
T 3fka_A 78 SV-----QGDIAMLHVEND-------W-------A-----GMRFDDFLTVLLH----EGSWRIVSKV 116 (120)
T ss_dssp EE-----ETTEEEEEEEEE-------E-------T-----TEEEEEEEEEEEE----TTEEEEEEEE
T ss_pred EE-----ECCEEEEEEEEE-------c-------C-----CCceEEEEEEEEe----CCEEEEEEEE
Confidence 22 245666666631 1 1 2468999999999 7999999987
No 4
>3duk_A NTF2-like protein of unknown function; structural genomics, joint center for STR genomics, JCSG, protein structure initiative; HET: MSE; 2.20A {Methylobacillus flagellatus KT} SCOP: d.17.4.0
Probab=85.74 E-value=10 Score=29.89 Aligned_cols=92 Identities=11% Similarity=0.222 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHhhcHHH---------------HHHHHHHHHHHhccCCceeeeeecccccceEEEEEEe
Q 022110 169 AVDLYKEINTLMANGDKTSLRKAVTEKM---------------YSALKNEIKQRESMWSSVNWELIEPIIKMRTLRARLI 233 (302)
Q Consensus 169 Ak~iy~~I~eA~a~gD~~~Lr~lvTe~~---------------y~~l~~~Ik~R~~~g~tv~W~~ve~le~~rvv~arli 233 (302)
.++......+++.+||.+.|+...+|++ ++++...+..+.+. ... +.++.
T Consensus 14 I~~~l~~y~~g~~~~D~~~l~~~f~pda~~~~~~~G~~l~~~~~~e~~~~v~~~~p~-~~~--------------~~~I~ 78 (125)
T 3duk_A 14 ITEVLNVYMNAAESGTGEEMSAAFHKDATIFGYVGDKLAFNGPIKDLYDWHNSNGPA-KNV--------------QSRIT 78 (125)
T ss_dssp HHHHHHHHHHHHHHCCHHHHGGGEEEEEEEEEEETTEEEEEEETHHHHHHHHHHCCC-TTC--------------EEEEE
T ss_pred HHHHHHHHHHHHHhcCHHHHHHhCCCCcEEEEEcCCCEEeeCCHHHHHHHHhccCCC-Ccc--------------cceEE
Confidence 4555667778889999999999998887 24555555544111 110 11222
Q ss_pred eeeccccCCcEEEEEEEEEeEEeeEEEcCCCceecCCCCCeeeeeEEEEEEEeCCCCCCCeEEEEEe
Q 022110 234 GVDRNDLNKVFVQLTLEFLAKQKFEAYDSKGVTVAGDKTKEVLVRDIWVFEKSLFHPGAYWRLCGRI 300 (302)
Q Consensus 234 ~i~~~~~~~~~~QVTVRF~s~Q~lavyD~~GrlV~G~~d~~~dV~EyWVFeR~l~~~~~~WrL~gki 300 (302)
.|+ +.++.+.+.|++. . ..| ..++||.+|.|. ++.|+|..|+
T Consensus 79 ~I~---i~gd~A~a~v~~~--~-----------~~~-----~~f~D~l~L~k~----dg~WkIv~K~ 120 (125)
T 3duk_A 79 NID---IVGTVAHARVEAE--N-----------WTN-----FKFSDLFLLLKL----DGKWTIVNKV 120 (125)
T ss_dssp EEE---EETTEEEEEEEEE--C-----------SSS-----CCEEEEEEEEEE----TTEEEEEEEE
T ss_pred EEE---EECCEEEEEEEEE--E-----------cCC-----CeEEEEEEEEEe----CCEEEEEEEE
Confidence 221 1245666655442 0 011 357999999999 7999999987
No 5
>3blz_A NTF2-like protein of unknown function; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.75A {Shewanella baltica} SCOP: d.17.4.14
Probab=85.37 E-value=8.8 Score=29.83 Aligned_cols=30 Identities=20% Similarity=0.223 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcHHHH
Q 022110 168 EAVDLYKEINTLMANGDKTSLRKAVTEKMY 197 (302)
Q Consensus 168 ~Ak~iy~~I~eA~a~gD~~~Lr~lvTe~~y 197 (302)
..+++......|+.++|.+.|+.+.+|++.
T Consensus 13 aI~~~~~~y~~a~~~~D~~~l~~~f~~da~ 42 (128)
T 3blz_A 13 AIVEVLSKYNEGGKKADSTIMRPAFSSQAT 42 (128)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHGGGEEEEEE
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHhhCCCcE
Confidence 445667788899999999999999988854
No 6
>3gwr_A Putative calcium/calmodulin-dependent protein KIN II association domain; YP_315894.1; HET: MSE PG4; 2.01A {Thiobacillus denitrificans atcc 25259}
Probab=81.96 E-value=11 Score=30.27 Aligned_cols=28 Identities=0% Similarity=-0.086 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcHH
Q 022110 168 EAVDLYKEINTLMANGDKTSLRKAVTEK 195 (302)
Q Consensus 168 ~Ak~iy~~I~eA~a~gD~~~Lr~lvTe~ 195 (302)
.++++.....+||.+||.+.|..+.+++
T Consensus 9 ~~~~~~~af~~A~~~gD~da~~al~a~d 36 (144)
T 3gwr_A 9 TPEAAEDAFYAAFEARSLDDMMAVWARD 36 (144)
T ss_dssp SHHHHHHHHHHHHHHTCHHHHHHHBCSS
T ss_pred CHHHHHHHHHHHHHcCCHHHHHhhccCC
Confidence 4567777889999999999999888776
No 7
>2ux0_A Calcium-calmodulin dependent protein kinase (CAM II gamma; transferase, oligomerisation DOM serine- threonine kinase, ATP-binding; 2.46A {Homo sapiens} SCOP: d.17.4.7 PDB: 2w2c_A 1hkx_A*
Probab=77.15 E-value=23 Score=27.38 Aligned_cols=29 Identities=17% Similarity=0.283 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhhcHH
Q 022110 167 TEAVDLYKEINTLMANGDKTSLRKAVTEK 195 (302)
Q Consensus 167 ~~Ak~iy~~I~eA~a~gD~~~Lr~lvTe~ 195 (302)
++..++.....+||++||.+.+..+++++
T Consensus 13 ~~I~~l~~~~~~A~~~~D~~~~~~l~a~d 41 (143)
T 2ux0_A 13 QEIIKITEQLIEAINNGDFEAYTKICDPG 41 (143)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHEEEE
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhcCCC
Confidence 45567788999999999999999998877
No 8
>4hyz_A Uncharacterized protein; PF13026 family protein, DUF3887, structural genomics, joint for structural genomics, JCSG; 2.25A {Ruminococcus gnavus}
Probab=76.58 E-value=25 Score=27.46 Aligned_cols=39 Identities=23% Similarity=0.335 Sum_probs=30.1
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHcCCHHHHHHhhcHHHHHHH
Q 022110 158 SGYSKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSAL 200 (302)
Q Consensus 158 p~F~~~~F~~~Ak~iy~~I~eA~a~gD~~~Lr~lvTe~~y~~l 200 (302)
..|+.+.-.+.|+ ++.+-+.+||.+.++.+++++|-+.|
T Consensus 9 ~~fde~~v~~~A~----~~I~~l~~~dy~~i~~~~~~~lk~~L 47 (114)
T 4hyz_A 9 EGFDKETVRKQAM----EDIEIAQSKDYESWKSRFTKDLQSSL 47 (114)
T ss_dssp TTCCHHHHHHHHH----HHHHHHHTTCHHHHHTTBCHHHHTTC
T ss_pred hhhhHHHHHHHHH----HHHHHHHhCCHHHHHHHhCHHHHhhC
Confidence 5788887777777 45667788999999999998885443
No 9
>2rcd_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.32A {Pectobacterium atrosepticum SCRI1043} SCOP: d.17.4.18
Probab=67.89 E-value=38 Score=25.86 Aligned_cols=30 Identities=7% Similarity=0.140 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHhhcHH
Q 022110 166 YTEAVDLYKEINTLMANGDKTSLRKAVTEK 195 (302)
Q Consensus 166 ~~~Ak~iy~~I~eA~a~gD~~~Lr~lvTe~ 195 (302)
..++.++|....+|+.+||.+.|..+.+++
T Consensus 13 ~~ei~~~~~~y~~A~~~~D~~~l~~lf~~d 42 (129)
T 2rcd_A 13 LADVTAAFYRYEKALTGNDVAVLDELFWHD 42 (129)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHBCCS
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHhccCC
Confidence 556788888889999999999999999876
No 10
>3gzr_A Uncharacterized protein with A NTF2-like fold; structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: MSE GOL; 1.40A {Caulobacter vibrioides}
Probab=67.48 E-value=44 Score=26.64 Aligned_cols=29 Identities=7% Similarity=-0.078 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022110 168 EAVDLYKEINTLMANGDKTSLRKAVTEKM 196 (302)
Q Consensus 168 ~Ak~iy~~I~eA~a~gD~~~Lr~lvTe~~ 196 (302)
..++++.....||.++|.+.|..+.+|++
T Consensus 7 aI~~l~~~~~~A~~~~D~d~~~~lf~~Da 35 (146)
T 3gzr_A 7 AIQALIQAYFTAWNTNAPERFAEIFWPDG 35 (146)
T ss_dssp HHHHHHHHHHHHHHTTCGGGSGGGEEEEE
T ss_pred HHHHHHHHHHHHHHcCCHHHHHhhccCCe
Confidence 34678889999999999999999988876
No 11
>3dmc_A NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, unknow function; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.17.4.10
Probab=58.74 E-value=4.2 Score=32.28 Aligned_cols=33 Identities=15% Similarity=0.148 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022110 164 KFYTEAVDLYKEINTLMANGDKTSLRKAVTEKM 196 (302)
Q Consensus 164 ~F~~~Ak~iy~~I~eA~a~gD~~~Lr~lvTe~~ 196 (302)
.=++.+++++....+|+++||.+.|.+|++|++
T Consensus 9 ~~~~~~~~~~~~f~~A~~~gD~~~l~~lla~D~ 41 (134)
T 3dmc_A 9 NTLKVAHQGFEFFTQGLATGEWQKFLDMLTEDF 41 (134)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCCHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHcCCCE
Confidence 345678899999999999999999999987654
No 12
>3ksp_A Calcium/calmodulin-dependent kinase II associatio; cystatin-like fold, structural genomics, joint center for ST genomics, JCSG; HET: MSE NHE; 2.59A {Exiguobacterium sibiricum 255-15}
Probab=58.48 E-value=65 Score=25.67 Aligned_cols=100 Identities=7% Similarity=0.110 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHcCCHHHHHHhhcHHHHHH--------HHHHHHHHhccCCceeeeeecccccceEEEEEEeeeeccccCC
Q 022110 171 DLYKEINTLMANGDKTSLRKAVTEKMYSA--------LKNEIKQRESMWSSVNWELIEPIIKMRTLRARLIGVDRNDLNK 242 (302)
Q Consensus 171 ~iy~~I~eA~a~gD~~~Lr~lvTe~~y~~--------l~~~Ik~R~~~g~tv~W~~ve~le~~rvv~arli~i~~~~~~~ 242 (302)
++=..-..|+.++|.+.|..|+++++... -..-|......+ .+.|.-+.. ..+.++ ..+
T Consensus 13 ~le~~~~~A~~~~D~~~L~~LL~ddf~~v~~sG~~~~K~~~L~~~~~~~-~~~~~~~~~----~~~~vr--------~~g 79 (129)
T 3ksp_A 13 TLLSERHAYLMEGNREAMHQLLSSDFSFIDGQGRQFDAETYLDHYVDPD-QIQWSNQIS----ESMVVE--------VFE 79 (129)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHEEEEEEEECTTCCEECHHHHHHHHSCTT-TEEEEEEEE----EEEEEE--------ECS
T ss_pred HHHHHHHHHHHhCCHHHHHhhcCCCEEEECCCCCCcCHHHHHHHhccCC-Cccceeecc----cceeEE--------EEC
Confidence 33455677999999999999998876431 122233222111 222221110 011112 136
Q ss_pred cEEEEEEEEEeEEeeEEEcCCCceecCCCCCeeeeeEEEEEEEeCCCCCCCeEEEE
Q 022110 243 VFVQLTLEFLAKQKFEAYDSKGVTVAGDKTKEVLVRDIWVFEKSLFHPGAYWRLCG 298 (302)
Q Consensus 243 ~~~QVTVRF~s~Q~lavyD~~GrlV~G~~d~~~dV~EyWVFeR~l~~~~~~WrL~g 298 (302)
+.++||++...+-. + .|..+.|. --++.+|+ |. ++.|||.+
T Consensus 80 d~AvVt~~~~~~~~---~--~g~~~~~~----~~~t~VW~--~~----~g~Wrlva 120 (129)
T 3ksp_A 80 TTALVQEIVEDHFS---Y--GRSMYIGR----FRSVSLYH--WA----NEGWKWHF 120 (129)
T ss_dssp SEEEEEEEEEEEEE---E--TTEEEEEE----EEEEEEEE--EE----TTEEEEEE
T ss_pred CEEEEEEEEEEEEe---c--CCeEEeEE----EEEEEEEE--Ee----CCeeEEEE
Confidence 78999988776442 2 24444332 34788884 33 58899975
No 13
>3cnx_A Uncharacterized protein; putative dehydratase, NTF2-like protein, structural genomics center for structural genomics, JCSG; HET: MSE PGE PG6; 2.10A {Streptomyces avermitilis} SCOP: d.17.4.17
Probab=57.88 E-value=82 Score=26.27 Aligned_cols=30 Identities=13% Similarity=-0.010 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcHHHH
Q 022110 168 EAVDLYKEINTLMANGDKTSLRKAVTEKMY 197 (302)
Q Consensus 168 ~Ak~iy~~I~eA~a~gD~~~Lr~lvTe~~y 197 (302)
+..++.....+||.+||.+.|..+-++...
T Consensus 13 ~I~~~~~~~~~A~~~gD~~~l~alwa~d~~ 42 (170)
T 3cnx_A 13 QVGLANTAFYEAMERGDFETLSSLWLTPAD 42 (170)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHBCCHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcCCcc
Confidence 345677888999999999999998888754
No 14
>4i4k_A Uncharacterized protein SGCJ; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: CIT PG4 1PE; 1.70A {Streptomyces globisporus}
Probab=55.67 E-value=73 Score=24.98 Aligned_cols=29 Identities=17% Similarity=0.135 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022110 168 EAVDLYKEINTLMANGDKTSLRKAVTEKM 196 (302)
Q Consensus 168 ~Ak~iy~~I~eA~a~gD~~~Lr~lvTe~~ 196 (302)
+.++++....+||.++|.+.|..+.+|++
T Consensus 20 ~i~~l~~~y~~A~~~~D~d~~~~lf~~Da 48 (143)
T 4i4k_A 20 AVAALPARIVAAWADHDADRFADVFAEDG 48 (143)
T ss_dssp HHHTHHHHHHHHHHTTCHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHhhcCc
Confidence 44677888999999999999999988765
No 15
>3hx8_A MLR2180 protein, putative ketosteroid isomerase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE UNL PG4; 1.45A {Mesorhizobium loti}
Probab=53.10 E-value=65 Score=23.67 Aligned_cols=31 Identities=3% Similarity=-0.013 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022110 166 YTEAVDLYKEINTLMANGDKTSLRKAVTEKM 196 (302)
Q Consensus 166 ~~~Ak~iy~~I~eA~a~gD~~~Lr~lvTe~~ 196 (302)
.+..+++.....+||++||.+.|..+.+|++
T Consensus 5 ~~~I~~~~~~~~~a~~~~D~~~~~~l~a~Da 35 (129)
T 3hx8_A 5 KEAIEAANADFVKAYNSKDAAGVASKYMDDA 35 (129)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHhhCCCe
Confidence 3455777888899999999999999988764
No 16
>3bb9_A Putative orphan protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.80A {Shewanella frigidimarina} SCOP: d.17.4.16
Probab=52.49 E-value=80 Score=24.54 Aligned_cols=30 Identities=13% Similarity=0.369 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022110 167 TEAVDLYKEINTLMANGDKTSLRKAVTEKM 196 (302)
Q Consensus 167 ~~Ak~iy~~I~eA~a~gD~~~Lr~lvTe~~ 196 (302)
+.+.++.....+|+.+||.+.|..+.+|++
T Consensus 30 ~~i~~~~~~~~~A~~~~D~~~l~~l~a~Da 59 (148)
T 3bb9_A 30 SAAGNVVKQFHAALQMGNEAIVRQSLAANV 59 (148)
T ss_dssp SHHHHHHHHHHHHHHHTCHHHHHHHEEEEE
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHhhCCCe
Confidence 356677888899999999999999988874
No 17
>3fsd_A NTF2-like protein of unknown function in nutrient; YP_427473.1, NTF2-like protein of unknown function in nutrie uptake; HET: UNL; 1.70A {Rhodospirillum rubrum atcc 11170} SCOP: d.17.4.0
Probab=50.31 E-value=83 Score=24.09 Aligned_cols=29 Identities=14% Similarity=0.276 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022110 168 EAVDLYKEINTLMANGDKTSLRKAVTEKM 196 (302)
Q Consensus 168 ~Ak~iy~~I~eA~a~gD~~~Lr~lvTe~~ 196 (302)
+..+++....+|+.+||.+.|..|+++++
T Consensus 15 ~I~~l~~~~~~A~~~~D~~~l~~L~~~d~ 43 (134)
T 3fsd_A 15 DIAFYEERLRAAMLTGDLKGLETLLADDL 43 (134)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHEEEEE
T ss_pred HHHHHHHHHHHHHHhCCHHHHHhhcCCCE
Confidence 45677888999999999999999998864
No 18
>3h3h_A Uncharacterized snoal-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE UNL MES; 1.60A {Burkholderia thailandensis E264}
Probab=49.22 E-value=6.4 Score=30.07 Aligned_cols=29 Identities=10% Similarity=0.012 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhhcHH
Q 022110 167 TEAVDLYKEINTLMANGDKTSLRKAVTEK 195 (302)
Q Consensus 167 ~~Ak~iy~~I~eA~a~gD~~~Lr~lvTe~ 195 (302)
+.++++.....+||+++|.+.|..+++|+
T Consensus 8 ~~~~~~~~~~~~a~n~~D~~~l~~l~a~D 36 (122)
T 3h3h_A 8 AFAQQFSREWIDAWNAHDLDAILSHYADG 36 (122)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHTTEEEE
T ss_pred HHHHHHHHHHHHHHhccCHHHHHHhcCCC
Confidence 45677888899999999999999888754
No 19
>3f40_A Uncharacterized NTF2-like protein; YP_677363.1, NTF2-like protein of unknown function, structural genomics; HET: MSE; 1.27A {Cytophaga hutchinsonii atcc 33406}
Probab=48.62 E-value=5.9 Score=30.58 Aligned_cols=28 Identities=18% Similarity=0.229 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022110 169 AVDLYKEINTLMANGDKTSLRKAVTEKM 196 (302)
Q Consensus 169 Ak~iy~~I~eA~a~gD~~~Lr~lvTe~~ 196 (302)
.+++-....+||++||.+.|..+++|++
T Consensus 8 ~~~~v~~f~~A~~~gD~~~l~~lla~Dv 35 (114)
T 3f40_A 8 TRDLVLEFIHALNTENFPAAKKRLNENF 35 (114)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHTEEEEE
T ss_pred HHHHHHHHHHHHHcCCHHHHHHhcCCCe
Confidence 4566677788999999999999998875
No 20
>3fgy_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.59A {Burkholderia xenovorans LB400} SCOP: d.17.4.0
Probab=47.86 E-value=6.3 Score=30.26 Aligned_cols=29 Identities=31% Similarity=0.464 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022110 168 EAVDLYKEINTLMANGDKTSLRKAVTEKM 196 (302)
Q Consensus 168 ~Ak~iy~~I~eA~a~gD~~~Lr~lvTe~~ 196 (302)
..+++.....+||.+||.+.|.++++|++
T Consensus 6 ~~~~~v~~~~~a~~~~d~~~~~~l~a~D~ 34 (135)
T 3fgy_A 6 ENVQIVKDFFAAMGRGDKKGLLAVSAEDI 34 (135)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHTEEEEE
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHhcCCCe
Confidence 45778888899999999999999988764
No 21
>3f7s_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; 2.11A {Pseudomonas putida KT2440}
Probab=47.06 E-value=93 Score=23.72 Aligned_cols=28 Identities=11% Similarity=0.118 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcHH
Q 022110 168 EAVDLYKEINTLMANGDKTSLRKAVTEK 195 (302)
Q Consensus 168 ~Ak~iy~~I~eA~a~gD~~~Lr~lvTe~ 195 (302)
+..+++....+|+++||.+.+..+.+++
T Consensus 9 ~I~~l~~~~~~A~~~~D~~~~~~l~a~D 36 (142)
T 3f7s_A 9 EIRQLIERWMQAVRDRDIPGIIAPYADD 36 (142)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTEEEE
T ss_pred HHHHHHHHHHHHHHcCCHHHHHhhcCCC
Confidence 4567788899999999999999988886
No 22
>1ohp_A Steroid delta-isomerase; inhibitor; HET: ESR; 1.53A {Pseudomonas testosteroni} SCOP: d.17.4.3 PDB: 1qjg_A* 8cho_A* 1ohs_A* 1ocv_A 1isk_A 3nuv_A* 1ogz_A* 3nhx_A* 3m8c_A* 3nxj_A* 3myt_A* 3mki_A 3mhe_A 1buq_A* 3nbr_A* 3t8u_A 3ov4_A* 3nm2_A
Probab=44.34 E-value=7.1 Score=28.78 Aligned_cols=29 Identities=7% Similarity=0.148 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022110 168 EAVDLYKEINTLMANGDKTSLRKAVTEKM 196 (302)
Q Consensus 168 ~Ak~iy~~I~eA~a~gD~~~Lr~lvTe~~ 196 (302)
..+++.....+||++||.+.|..+++|++
T Consensus 6 ~~~~~v~~~~~a~~~~D~~~~~~l~a~D~ 34 (125)
T 1ohp_A 6 HMTAVVQRYVAALNAGDLDGIVALFADDA 34 (125)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHcCCCe
Confidence 45677788889999999999999998874
No 23
>3u7d_B Protein HEG homolog 1; FERM domain, RAP1 effector, membrane protein cytoplasmic TAI protein binding; 2.49A {Homo sapiens}
Probab=43.01 E-value=7.3 Score=22.80 Aligned_cols=17 Identities=12% Similarity=0.259 Sum_probs=14.4
Q ss_pred cccccccCCCCCCcccc
Q 022110 48 SSCLCKDHGALPWTRGS 64 (302)
Q Consensus 48 ~~~~~~~~~~~~~~~~~ 64 (302)
++|.|-|+|||.|-...
T Consensus 3 hsciypgqynpsfisdd 19 (26)
T 3u7d_B 3 HSCIFPGQYNPSFISDE 19 (26)
T ss_pred ccccccCccCcccccCc
Confidence 78999999999997643
No 24
>1tuh_A BAL32A, hypothetical protein EGC068; unknown function; 1.85A {Uncultured bacterium} SCOP: d.17.4.11
Probab=42.50 E-value=8.6 Score=30.59 Aligned_cols=28 Identities=14% Similarity=0.245 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcHH
Q 022110 168 EAVDLYKEINTLMANGDKTSLRKAVTEK 195 (302)
Q Consensus 168 ~Ak~iy~~I~eA~a~gD~~~Lr~lvTe~ 195 (302)
..+++.....+||++||.+.|.++++|+
T Consensus 30 ~~~~~v~~~~~a~~~gD~~~l~~l~a~D 57 (156)
T 1tuh_A 30 QNAETVRRGYAAFNSGDMKTLTELFDEN 57 (156)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHEEEE
T ss_pred hHHHHHHHHHHHHhCCCHHHHHHhcCCC
Confidence 4566777888899999999999998865
No 25
>3i0y_A Putative polyketide cyclase; cystatin-like fold, structural genomics, joint center for ST genomics, JCSG, protein structure initiative; HET: MSE UNL; 1.50A {Xanthomonas campestris PV}
Probab=42.31 E-value=8 Score=29.75 Aligned_cols=28 Identities=18% Similarity=0.240 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022110 169 AVDLYKEINTLMANGDKTSLRKAVTEKM 196 (302)
Q Consensus 169 Ak~iy~~I~eA~a~gD~~~Lr~lvTe~~ 196 (302)
++++.....+||+++|.+.|.++++|++
T Consensus 10 ~~~~v~~~~~a~~~~D~~~~~~l~a~D~ 37 (140)
T 3i0y_A 10 ATGLVQAYYEAFNRGDWDAMLAFLAEDV 37 (140)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHTEEEEE
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHcCCcE
Confidence 5677888889999999999999998876
No 26
>3g0k_A Putative membrane protein; snoal-like polyketide cyclase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.30A {Novosphingobium aromaticivorans}
Probab=42.17 E-value=50 Score=26.34 Aligned_cols=30 Identities=13% Similarity=0.221 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHH-HHHcCCHHHHHHhhcHHH
Q 022110 167 TEAVDLYKEINT-LMANGDKTSLRKAVTEKM 196 (302)
Q Consensus 167 ~~Ak~iy~~I~e-A~a~gD~~~Lr~lvTe~~ 196 (302)
+..+++.....+ ||.+||.+.+.+++++++
T Consensus 27 ~~nk~lV~~f~~~a~~~~D~~~~~~~~a~D~ 57 (148)
T 3g0k_A 27 QANHDLVIEMYNKVLIAMDSSAVDRYIAPGY 57 (148)
T ss_dssp HHHHHHHHHHHHHTTTTTCGGGGGGTEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHhcCcCe
Confidence 445666776777 899999999999998764
No 27
>3ebt_A Uncharacterized NTF2-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; 1.30A {Burkholderia pseudomallei K96243} SCOP: d.17.4.9
Probab=42.01 E-value=8.4 Score=29.31 Aligned_cols=29 Identities=10% Similarity=0.132 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022110 168 EAVDLYKEINTLMANGDKTSLRKAVTEKM 196 (302)
Q Consensus 168 ~Ak~iy~~I~eA~a~gD~~~Lr~lvTe~~ 196 (302)
..+++.....+||.+||.+.+.++++|++
T Consensus 4 ~~~~~v~~~~~a~~~~d~~~~~~l~a~D~ 32 (132)
T 3ebt_A 4 NNMQTVRESYEAFHRRDLPGVLAALAPDV 32 (132)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTEEEEE
T ss_pred hHHHHHHHHHHHHhccCHHHHHHhcCCCE
Confidence 35677888889999999999999998875
No 28
>3en8_A Uncharacterized NTF-2 like protein; YP_553245.1, NTF-2 like protein of unknown function, structu genomics; HET: MSE PG4; 1.85A {Burkholderia xenovorans LB400} SCOP: d.17.4.20
Probab=41.55 E-value=7.6 Score=30.46 Aligned_cols=29 Identities=10% Similarity=0.030 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022110 168 EAVDLYKEINTLMANGDKTSLRKAVTEKM 196 (302)
Q Consensus 168 ~Ak~iy~~I~eA~a~gD~~~Lr~lvTe~~ 196 (302)
..+++.....+|+++||.+.|..|++|++
T Consensus 6 ~~~~~v~~~~~a~~~~D~~~l~~llaeD~ 34 (128)
T 3en8_A 6 KIREALNAHWQASAAGDFDAEHDIYDDDA 34 (128)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHTTTEEEEE
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHhcCCCE
Confidence 45778888899999999999999998765
No 29
>3fh1_A Uncharacterized NTF2-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=39.94 E-value=7.7 Score=29.90 Aligned_cols=30 Identities=13% Similarity=0.344 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022110 167 TEAVDLYKEINTLMANGDKTSLRKAVTEKM 196 (302)
Q Consensus 167 ~~Ak~iy~~I~eA~a~gD~~~Lr~lvTe~~ 196 (302)
+..+++.....+||+++|.+.|.++++|++
T Consensus 17 ~~~~~~v~~~~~a~~~~D~~~l~~l~a~D~ 46 (129)
T 3fh1_A 17 EQTAEIMRRFNDVFQLHDPAALPELIAEEC 46 (129)
T ss_dssp HHHHHHHHHHHHHHHTTCGGGHHHHEEEEE
T ss_pred hhHHHHHHHHHHHHHccCHHHHHHhcCCCE
Confidence 345677778888999999999999987654
No 30
>3ehc_A Snoal-like polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.12A {Agrobacterium tumefaciens str}
Probab=38.59 E-value=24 Score=26.78 Aligned_cols=28 Identities=14% Similarity=0.152 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022110 169 AVDLYKEINTLMANGDKTSLRKAVTEKM 196 (302)
Q Consensus 169 Ak~iy~~I~eA~a~gD~~~Lr~lvTe~~ 196 (302)
.++++....+||+++|.+.+.++++|++
T Consensus 5 ~~~~v~~~~~~~~~~d~~~~~~~~a~d~ 32 (128)
T 3ehc_A 5 LNDIYLAYLDSLNHQAFDELGTFVDDNV 32 (128)
T ss_dssp HHHHHHHHHHHHHTTCGGGGGGTEEEEE
T ss_pred HHHHHHHHHHHHhcCCHHHHHHhcCcce
Confidence 4678888889999999999999999754
No 31
>2v2f_A Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc5_A* 2zc6_A*
Probab=38.45 E-value=8.4 Score=22.26 Aligned_cols=15 Identities=27% Similarity=0.390 Sum_probs=12.1
Q ss_pred EEeeEEEcCCCceec
Q 022110 254 KQKFEAYDSKGVTVA 268 (302)
Q Consensus 254 ~Q~lavyD~~GrlV~ 268 (302)
.+...+||++|++|.
T Consensus 4 ~~ss~IYD~~g~~i~ 18 (26)
T 2v2f_A 4 TTSSKIYDNKNQLIA 18 (26)
T ss_pred CCCCEEEeCCCCEee
Confidence 455689999999885
No 32
>1oh0_A Steroid delta-isomerase; ketosteroid isomerase, KSI, equilenin, PI, LBHB; HET: EQU; 1.1A {Pseudomonas putida} SCOP: d.17.4.3 PDB: 1e3v_A* 1opy_A 1dmq_A 1dmm_A 1ea2_A 3cpo_A 1e3r_A* 1ogx_A 2inx_A 2pzv_A 1c7h_A 1dmn_A 1k41_A 1oho_A* 3fzw_A* 1cqs_A* 1w00_A 1e97_A 1w6y_A* 3ipt_A* ...
Probab=37.87 E-value=22 Score=26.65 Aligned_cols=30 Identities=17% Similarity=0.217 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022110 167 TEAVDLYKEINTLMANGDKTSLRKAVTEKM 196 (302)
Q Consensus 167 ~~Ak~iy~~I~eA~a~gD~~~Lr~lvTe~~ 196 (302)
...+++.....+||++||.+.|..+++|++
T Consensus 7 ~~~~~~v~~~~~a~~~~D~~~l~~l~a~D~ 36 (131)
T 1oh0_A 7 QEVQGLMARYIELVDVGDIEAIVQMYADDA 36 (131)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHEEEEE
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHcCCCE
Confidence 345677788889999999999999988874
No 33
>3ec9_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.60A {Burkholderia thailandensis E264} SCOP: d.17.4.10
Probab=37.34 E-value=10 Score=29.34 Aligned_cols=30 Identities=3% Similarity=0.067 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcHHHH
Q 022110 168 EAVDLYKEINTLMANGDKTSLRKAVTEKMY 197 (302)
Q Consensus 168 ~Ak~iy~~I~eA~a~gD~~~Lr~lvTe~~y 197 (302)
..+++.....+|+.+||.+.|.++++|++-
T Consensus 13 ~~~~~v~~~~~a~~~gD~~~~~~l~a~D~~ 42 (140)
T 3ec9_A 13 TPYQIVADHYAASDRHDPAAMMADIAPAIE 42 (140)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHTTEEEEEE
T ss_pred hHHHHHHHHHHHHhCCCHHHHHHhcCCCeE
Confidence 346777888889999999999999887753
No 34
>2bng_A MB2760; epoxide hydrolase, limonene, hydrolase, structural proteomics in europe, spine, structural genomics; 2.5A {Mycobacterium tuberculosis} SCOP: d.17.4.8
Probab=36.32 E-value=13 Score=29.22 Aligned_cols=29 Identities=17% Similarity=0.274 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022110 168 EAVDLYKEINTLMANGDKTSLRKAVTEKM 196 (302)
Q Consensus 168 ~Ak~iy~~I~eA~a~gD~~~Lr~lvTe~~ 196 (302)
..+++.....+||.+||.+.|..+++|++
T Consensus 16 ~~~~~v~~f~~a~~~gD~~~l~~l~a~D~ 44 (149)
T 2bng_A 16 EAIRAVEAFLNALQNEDFDTVDAALGDDL 44 (149)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHEEEEE
T ss_pred CHHHHHHHHHHHHhcCCHHHHHHHcCCCE
Confidence 45677788899999999999999998864
No 35
>2gex_A SNOL; alpha+beta barrel, oxidoreductase; 2.50A {Streptomyces nogalater} SCOP: d.17.4.9
Probab=35.61 E-value=14 Score=29.23 Aligned_cols=30 Identities=10% Similarity=0.000 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022110 167 TEAVDLYKEINTLMANGDKTSLRKAVTEKM 196 (302)
Q Consensus 167 ~~Ak~iy~~I~eA~a~gD~~~Lr~lvTe~~ 196 (302)
+..+++.....+||++||.+.+.++++|++
T Consensus 4 ~~~~~~v~~~~~a~~~~d~~~~~~~~a~D~ 33 (152)
T 2gex_A 4 TANKERCLEMVAAWNRWDVSGVVAHWAPDV 33 (152)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHTTEEEEE
T ss_pred hHHHHHHHHHHHHHhCCCHHHHHHHcCCCe
Confidence 345677888889999999999999988653
No 36
>3dm8_A Uncharacterized protein RPA4348; siras, putative isomerase, structural genomics, PSI-2, prote structure initiative; HET: CE9; 1.80A {Rhodopseudomonas palustris} SCOP: d.17.4.20
Probab=35.43 E-value=9.2 Score=30.20 Aligned_cols=28 Identities=4% Similarity=0.215 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022110 169 AVDLYKEINTLMANGDKTSLRKAVTEKM 196 (302)
Q Consensus 169 Ak~iy~~I~eA~a~gD~~~Lr~lvTe~~ 196 (302)
+.++.....+||++||.+.|.++++|++
T Consensus 6 ~~~~v~~~~~a~~~gD~~~l~~l~a~Dv 33 (143)
T 3dm8_A 6 LWRFSRALHRALNDRQTEELATIIDDNI 33 (143)
T ss_dssp HHHHHHHHHHHHHHCCCHHHHHHEEEEE
T ss_pred HHHHHHHHHHHHHCCCHHHHHHhcCCCe
Confidence 3566677889999999999999987765
No 37
>2r4i_A Uncharacterized protein; NTF2-like protein, structural genomics, joint center for STR genomics, JCSG; HET: MSE CIT; 1.60A {Cytophaga hutchinsonii atcc 33406} SCOP: d.17.4.15
Probab=35.21 E-value=21 Score=26.41 Aligned_cols=30 Identities=23% Similarity=0.287 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022110 167 TEAVDLYKEINTLMANGDKTSLRKAVTEKM 196 (302)
Q Consensus 167 ~~Ak~iy~~I~eA~a~gD~~~Lr~lvTe~~ 196 (302)
++..++.....+|+.+||.+.|..+++|++
T Consensus 6 ~~i~~l~~~~~~A~~~~D~~~l~~l~~~d~ 35 (123)
T 2r4i_A 6 DVILDCEKKLLTAIQNNDVESLEVLLHDDL 35 (123)
T ss_dssp HHHTHHHHHHHHHHHHTCHHHHHHHEEEEE
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHhhhCcCe
Confidence 455677889999999999999999998864
No 38
>1nww_A Limonene-1,2-epoxide hydrolase; HET: MES; 1.20A {Rhodococcus erythropolis} SCOP: d.17.4.8 PDB: 1nu3_A*
Probab=35.17 E-value=13 Score=28.95 Aligned_cols=27 Identities=15% Similarity=0.174 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022110 170 VDLYKEINTLMANGDKTSLRKAVTEKM 196 (302)
Q Consensus 170 k~iy~~I~eA~a~gD~~~Lr~lvTe~~ 196 (302)
+++.....+||++||.+.|..+++|++
T Consensus 25 ~~~v~~~~~a~~~~D~~~l~~l~a~D~ 51 (149)
T 1nww_A 25 EKIVLEFMDALTSNDAAKLIEYFAEDT 51 (149)
T ss_dssp HHHHHHHHHHGGGCCHHHHHTTBCSSC
T ss_pred HHHHHHHHHHHhcCCHHHHHHHhCCCE
Confidence 455666788999999999999998764
No 39
>3f7x_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL; 1.24A {Pseudomonas putida KT2440}
Probab=34.67 E-value=12 Score=30.06 Aligned_cols=29 Identities=17% Similarity=0.285 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHhhcHHHH
Q 022110 169 AVDLYKEINTLMANGDKTSLRKAVTEKMY 197 (302)
Q Consensus 169 Ak~iy~~I~eA~a~gD~~~Lr~lvTe~~y 197 (302)
++++.....+||++||.+.+.++++|++-
T Consensus 22 ~~~lv~~~~~a~~~~D~~~l~~l~a~D~v 50 (151)
T 3f7x_A 22 ATELVNAYYAAFNAGDMPAFLALLSEDVI 50 (151)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHTEEEEEE
T ss_pred HHHHHHHHHHHHHcCCHHHHHHhcCCCEE
Confidence 46777888899999999999999988764
No 40
>1s5a_A Hypothetical protein YESE; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG, U function; 1.70A {Bacillus subtilis} SCOP: d.17.4.10
Probab=33.22 E-value=14 Score=28.62 Aligned_cols=29 Identities=17% Similarity=0.197 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022110 168 EAVDLYKEINTLMANGDKTSLRKAVTEKM 196 (302)
Q Consensus 168 ~Ak~iy~~I~eA~a~gD~~~Lr~lvTe~~ 196 (302)
..+++.....+||++||.+.|..+++|++
T Consensus 11 ~~~~~v~~~~~a~~~~D~~~l~~l~a~D~ 39 (150)
T 1s5a_A 11 KACETLRKFMAYMLEKDMKSWTELWDENA 39 (150)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTEEEEE
T ss_pred CHHHHHHHHHHHHhcCCHHHHHHhCCCCE
Confidence 35677888889999999999999998875
No 41
>2r25_A Phosphorelay intermediate protein YPD1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: a.24.10.2 PDB: 1c03_A 1oxk_A 1oxb_A 1c02_A 1qsp_A
Probab=31.86 E-value=52 Score=27.88 Aligned_cols=36 Identities=19% Similarity=0.303 Sum_probs=30.3
Q ss_pred CCCCh---HHHHHHHHHHHHHHHHHHH-cCCHHHHHHhhc
Q 022110 158 SGYSK---QKFYTEAVDLYKEINTLMA-NGDKTSLRKAVT 193 (302)
Q Consensus 158 p~F~~---~~F~~~Ak~iy~~I~eA~a-~gD~~~Lr~lvT 193 (302)
|+|.. ..|++.|...+..|.+|++ .+|.+.|+.++.
T Consensus 25 p~Fv~elV~~F~edse~~l~~L~~AL~~~~D~~~L~~~aH 64 (167)
T 2r25_A 25 SDFSKGLIIQFIDQAQTTFAQMQRQLDGEKNLTELDNLGH 64 (167)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred chHHHHHHHHHHHhHHHHHHHHHHHHhcccCHHHHHHHHH
Confidence 45643 5899999999999999999 999999886654
No 42
>3ff2_A Uncharacterized cystatin fold protein (YP_497570. NTF2 superfamily; structural genomics; 1.90A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=31.64 E-value=26 Score=26.18 Aligned_cols=27 Identities=11% Similarity=0.107 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022110 170 VDLYKEINTLMANGDKTSLRKAVTEKM 196 (302)
Q Consensus 170 k~iy~~I~eA~a~gD~~~Lr~lvTe~~ 196 (302)
+++.....+||+++|.+.+..+++|++
T Consensus 5 ~~~v~~~~~a~n~~D~~~~~~~~a~D~ 31 (117)
T 3ff2_A 5 LETAKAMIAAYNAQDVDTYVSYMTDDA 31 (117)
T ss_dssp HHHHHHHHHHHHTTCHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHcccCHHHHHHhcCCcE
Confidence 467778889999999999999998876
No 43
>2f86_B Hypothetical protein K11E8.1D; UNC-43, oligomerization domain, transferase; 2.64A {Caenorhabditis elegans} SCOP: d.17.4.7
Probab=31.32 E-value=29 Score=27.95 Aligned_cols=30 Identities=10% Similarity=0.137 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcHHHH
Q 022110 168 EAVDLYKEINTLMANGDKTSLRKAVTEKMY 197 (302)
Q Consensus 168 ~Ak~iy~~I~eA~a~gD~~~Lr~lvTe~~y 197 (302)
+-.++-....+|+.+||.+.+.++|+|++-
T Consensus 13 eI~~~~~~~~~Ai~~gD~~~~~~l~~~dv~ 42 (143)
T 2f86_B 13 DIVRVTQTLLDAISCKDFETYTRLCDTSMT 42 (143)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHEEEEEE
T ss_pred HHHHHHHHHHHHHHccCHHHHHHhcCCCEE
Confidence 344667889999999999999998887653
No 44
>1z1s_A Hypothetical protein PA3332; beta barrel, conserved hypothetical protein, structural genomics, PSI, protein structure initiative; HET: PGE; 1.49A {Pseudomonas aeruginosa PAO1} SCOP: d.17.4.10
Probab=31.19 E-value=16 Score=29.46 Aligned_cols=29 Identities=17% Similarity=0.162 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHhhcHHHH
Q 022110 169 AVDLYKEINTLMANGDKTSLRKAVTEKMY 197 (302)
Q Consensus 169 Ak~iy~~I~eA~a~gD~~~Lr~lvTe~~y 197 (302)
.+++.....+||.+||.+.|.++++|++.
T Consensus 25 ~~~~v~~~~~a~~~~D~~~l~~l~a~D~v 53 (163)
T 1z1s_A 25 AKEILVHSLRLLENGDARGWCDLFHPEGV 53 (163)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHTEEEEEE
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHCCCCEE
Confidence 46677788899999999999999998864
No 45
>3d9r_A Ketosteroid isomerase-like protein; YP_049581.1, structural joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 2.40A {Pectobacterium atrosepticum} SCOP: d.17.4.27
Probab=31.05 E-value=36 Score=25.49 Aligned_cols=29 Identities=10% Similarity=-0.069 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022110 168 EAVDLYKEINTLMANGDKTSLRKAVTEKM 196 (302)
Q Consensus 168 ~Ak~iy~~I~eA~a~gD~~~Lr~lvTe~~ 196 (302)
..+++.....+|+++||.+.+..+.+|++
T Consensus 12 ~i~~~~~~~~~a~~~~D~~~~~~l~a~D~ 40 (135)
T 3d9r_A 12 VIEAAAIAYLTAFNRADIPAVIATYTDDG 40 (135)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHTEEEEE
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHhcCCCE
Confidence 45677788899999999999999988764
No 46
>2k54_A Protein ATU0742; protein of unknown function, structural genomics, PSI-2, Pro structure initiative; NMR {Agrobacterium tumefaciens str} SCOP: d.17.4.29
Probab=30.54 E-value=31 Score=25.85 Aligned_cols=29 Identities=7% Similarity=-0.129 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022110 168 EAVDLYKEINTLMANGDKTSLRKAVTEKM 196 (302)
Q Consensus 168 ~Ak~iy~~I~eA~a~gD~~~Lr~lvTe~~ 196 (302)
.++++.....+||++||.+.+..+++|++
T Consensus 4 ~~~~~v~~~~~a~n~~D~~~~~~~~a~D~ 32 (123)
T 2k54_A 4 EIELPVQKQLEAYNARDIDAFMAWWADDC 32 (123)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHTEEEEE
T ss_pred CHHHHHHHHHHHHHhcCHHHHHhhcCCce
Confidence 35667777889999999999999998875
No 47
>3g8z_A Protein of unknown function with cystatin-like FO; NP_639274.1, snoal-like polyketide cyclase; HET: MSE; 1.90A {Xanthomonas campestris PV}
Probab=30.37 E-value=15 Score=29.24 Aligned_cols=29 Identities=21% Similarity=0.420 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022110 168 EAVDLYKEINTLMANGDKTSLRKAVTEKM 196 (302)
Q Consensus 168 ~Ak~iy~~I~eA~a~gD~~~Lr~lvTe~~ 196 (302)
..+++.....+|+.+||.+.|.++++|++
T Consensus 21 ~n~~~v~~~~~a~~~gD~~~l~~l~a~D~ 49 (148)
T 3g8z_A 21 NTIDIAKSYITAIQTGDHATLGSIISPDV 49 (148)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHEEEEE
T ss_pred chHHHHHHHHHHHhcCCHHHHHHHcCCCE
Confidence 34677888889999999999999998775
No 48
>2gey_A ACLR protein; alpha+beta barrel, oxidoreductase; HET: PG4; 1.80A {Streptomyces galilaeus} SCOP: d.17.4.9
Probab=28.36 E-value=18 Score=28.90 Aligned_cols=28 Identities=18% Similarity=0.084 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcHH
Q 022110 168 EAVDLYKEINTLMANGDKTSLRKAVTEK 195 (302)
Q Consensus 168 ~Ak~iy~~I~eA~a~gD~~~Lr~lvTe~ 195 (302)
..+++.....+||++||.+.+.++++|+
T Consensus 5 ~~~~~v~~~~~a~~~~D~~~~~~~~a~D 32 (158)
T 2gey_A 5 ERKALCLEMVAAWNRWDLSGIIKHWSPD 32 (158)
T ss_dssp HHHHHHHHHHHHHHTTCTHHHHTTEEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHcCCC
Confidence 4567788888899999999999999875
No 49
>3g16_A Uncharacterized protein with cystatin-like fold; YP_001022489.1, protein of unknown function with cystatin-LI structural genomics; HET: MSE; 1.45A {Methylibium petroleiphilum PM1}
Probab=28.15 E-value=21 Score=29.64 Aligned_cols=30 Identities=3% Similarity=0.018 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcHHHH
Q 022110 168 EAVDLYKEINTLMANGDKTSLRKAVTEKMY 197 (302)
Q Consensus 168 ~Ak~iy~~I~eA~a~gD~~~Lr~lvTe~~y 197 (302)
..+++.....+||++||.+.|.++++|++-
T Consensus 11 ~~~~~v~ry~~A~n~gD~d~l~~l~aeD~v 40 (156)
T 3g16_A 11 AMEKVIRTYYDGCNEADEAKMIACFVPEAV 40 (156)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTEEEEEE
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHhcCCCEE
Confidence 345667778889999999999999987654
No 50
>2a15_A Hypothetical protein RV0760C; beta-alpha-barrel, structural genomics, PSI, protein structure initiative; 1.68A {Mycobacterium tuberculosis} SCOP: d.17.4.3 PDB: 2z76_A* 2z77_A* 2z7a_A
Probab=27.10 E-value=22 Score=27.20 Aligned_cols=29 Identities=7% Similarity=0.018 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022110 168 EAVDLYKEINTLMANGDKTSLRKAVTEKM 196 (302)
Q Consensus 168 ~Ak~iy~~I~eA~a~gD~~~Lr~lvTe~~ 196 (302)
.++++.....+||++||.+.+..+.+|++
T Consensus 8 ~~~~~v~~~~~a~~~~D~~~~~~l~a~D~ 36 (139)
T 2a15_A 8 PALIASQSSWRCVQAHDREGWLALMADDV 36 (139)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHTEEEEE
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHhcCCCE
Confidence 35667778888999999999999988874
No 51
>3mso_A Steroid delta-isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.57A {Pseudomonas aeruginosa}
Probab=26.85 E-value=11 Score=30.23 Aligned_cols=30 Identities=20% Similarity=0.246 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022110 167 TEAVDLYKEINTLMANGDKTSLRKAVTEKM 196 (302)
Q Consensus 167 ~~Ak~iy~~I~eA~a~gD~~~Lr~lvTe~~ 196 (302)
+.+++.+...++|+++||.+.|.++++|++
T Consensus 9 ~~~~~~~~~~~~a~~~~D~~~l~~l~a~D~ 38 (143)
T 3mso_A 9 ANAAATLAEWHGLIARRDLSGLPRLLHPDA 38 (143)
T ss_dssp HHHHHHHHHHHHHHHTTCCTTGGGGEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHhcCCCE
Confidence 456788899999999999999999988654
No 52
>3f14_A Uncharacterized NTF2-like protein; YP_680363.1, NTF2-like protein of unknown function, structur genomics; HET: MSE TRS PGE; 1.45A {Cytophaga hutchinsonii atcc 33406}
Probab=24.73 E-value=22 Score=26.76 Aligned_cols=26 Identities=12% Similarity=0.169 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022110 171 DLYKEINTLMANGDKTSLRKAVTEKM 196 (302)
Q Consensus 171 ~iy~~I~eA~a~gD~~~Lr~lvTe~~ 196 (302)
+.-....+||++||.+.+..+++|++
T Consensus 4 ~~v~~~~~a~~~gD~~~~~~~ladDv 29 (112)
T 3f14_A 4 TTHYSIAQHFSSGDFPAVYACFNDII 29 (112)
T ss_dssp HHHHHHHHHHHTTCGGGTGGGEEEEE
T ss_pred HHHHHHHHHHHcCCHHHHHHhcCCce
Confidence 34567788999999999999998764
No 53
>2a0b_A HPT domain; sensory transduction, histidine kinase, phosphotransfer, two-component system, four-helix bundle; 1.57A {Escherichia coli} SCOP: a.24.10.1 PDB: 1bdj_B 1fr0_A 1a0b_A
Probab=23.79 E-value=95 Score=23.87 Aligned_cols=29 Identities=10% Similarity=0.116 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHh
Q 022110 163 QKFYTEAVDLYKEINTLMANGDKTSLRKA 191 (302)
Q Consensus 163 ~~F~~~Ak~iy~~I~eA~a~gD~~~Lr~l 191 (302)
..|+.++.+....+.+|+.++|.+.++..
T Consensus 34 ~~F~~e~~~~l~~L~~a~~~~d~~~~~~~ 62 (125)
T 2a0b_A 34 AVFEKMMPGYVSVLESNLTAQDKKGIVEE 62 (125)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHHHcCCHHHHHHH
Confidence 57999999999999999999998876644
No 54
>4h3u_A Hypothetical protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.15A {Catenulispora acidiphila}
Probab=23.65 E-value=21 Score=28.42 Aligned_cols=26 Identities=4% Similarity=0.047 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022110 171 DLYKEINTLMANGDKTSLRKAVTEKM 196 (302)
Q Consensus 171 ~iy~~I~eA~a~gD~~~Lr~lvTe~~ 196 (302)
++...-.+||++||.+.|..+++|++
T Consensus 29 eiv~~y~~A~n~~D~d~~~~l~a~D~ 54 (158)
T 4h3u_A 29 EIVTAWAAAWTGTNPNALGTLFAADG 54 (158)
T ss_dssp HHHHHHHHHHHSSCHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHcCCHHHHHHHhcccc
Confidence 56667789999999999999998764
No 55
>3f8x_A Putative delta-5-3-ketosteroid isomerase; structural genomics, joint center for structural genomics; HET: MSE; 1.55A {Pectobacterium atrosepticum SCRI1043}
Probab=23.07 E-value=15 Score=30.01 Aligned_cols=32 Identities=16% Similarity=0.157 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022110 165 FYTEAVDLYKEINTLMANGDKTSLRKAVTEKM 196 (302)
Q Consensus 165 F~~~Ak~iy~~I~eA~a~gD~~~Lr~lvTe~~ 196 (302)
-.+.++++....++|+..||.+.|..+++|++
T Consensus 18 ~~~~~~~~l~~f~~a~~~gD~~aL~~LlA~Dv 49 (148)
T 3f8x_A 18 PNAAVQSGLQEWHRIIAEADWERLPDLLAEDV 49 (148)
T ss_dssp CCHHHHHHHHHHHHHHHHTCGGGSGGGEEEEE
T ss_pred hhHHHHHHHHHHHHHHHcCCHHHHHHHhCCCE
Confidence 34566788888999999999999999987654
No 56
>3flj_A Uncharacterized protein conserved in bacteria WIT cystatin-like fold; YP_168589.1; HET: MSE; 2.00A {Silicibacter pomeroyi dss-3}
Probab=22.53 E-value=10 Score=31.66 Aligned_cols=32 Identities=13% Similarity=0.371 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022110 165 FYTEAVDLYKEINTLMANGDKTSLRKAVTEKM 196 (302)
Q Consensus 165 F~~~Ak~iy~~I~eA~a~gD~~~Lr~lvTe~~ 196 (302)
+.+++++.....++||+.||.+.|.++++|++
T Consensus 16 ~~~~~~~~v~~f~~A~~~gD~~aL~~LlA~Dv 47 (155)
T 3flj_A 16 YFQGMHPTIARMQEVVAKGDESLIHALLAEDV 47 (155)
T ss_dssp TTTTCCHHHHHHHHHHTTTCHHHHHTTEEEEE
T ss_pred hhhhHHHHHHHHHHHHHhCCHHHHHHhcCCCE
Confidence 44566777888899999999999999988764
No 57
>2owp_A Hypothetical protein BXE_B1374; cystatin-like fold, DUF3225 family protein, structural genom joint center for structural genomics, JCSG; 2.00A {Burkholderia xenovorans} SCOP: d.17.4.18
Probab=21.48 E-value=63 Score=25.31 Aligned_cols=33 Identities=6% Similarity=0.099 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022110 164 KFYTEAVDLYKEINTLMANGDKTSLRKAVTEKM 196 (302)
Q Consensus 164 ~F~~~Ak~iy~~I~eA~a~gD~~~Lr~lvTe~~ 196 (302)
.-..+..++|....+|+..+|.+.|..+.+++.
T Consensus 8 ~~~~eI~~~~~~y~~Al~~~D~~~L~~lf~~d~ 40 (129)
T 2owp_A 8 DIVAQVQAAFVEYERALVENDIEAMNALFWHTP 40 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHTBCCST
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHhhccCCC
Confidence 345667788999999999999999999998885
No 58
>1sjw_A Nogalonic acid methyl ester cyclase; anthracyclines, nogalamycin, snoal, aldol condensation, LYAS structural genomics; HET: NGV; 1.35A {Streptomyces nogalater} SCOP: d.17.4.9
Probab=20.72 E-value=11 Score=29.13 Aligned_cols=29 Identities=3% Similarity=0.233 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcHHH
Q 022110 168 EAVDLYKEINTLMANGDKTSLRKAVTEKM 196 (302)
Q Consensus 168 ~Ak~iy~~I~eA~a~gD~~~Lr~lvTe~~ 196 (302)
..+++.....+||++||.+.+.+++++++
T Consensus 3 ~~~~~v~~~~~a~~~~d~~~~~~~~a~d~ 31 (144)
T 1sjw_A 3 RQTEIVRRMVSAFNTGRTDDVDEYIHPDY 31 (144)
T ss_dssp HHHHHHHHHHHHHHHCCCTTGGGTEEEEE
T ss_pred hHHHHHHHHHHHHhCCCHHHHHHHcCcCe
Confidence 34667777778999999999998887653
Done!