Your job contains 1 sequence.
>022111
MPAQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQ
VAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLA
CGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLAS
CGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW
TCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANNVTLWKEAVDGEWQQVSVVEP
QT
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 022111
(302 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2045648 - symbol:AT2G30050 "AT2G30050" species... 1382 2.6e-141 1
TAIR|locus:2100267 - symbol:AT3G01340 "AT3G01340" species... 1374 1.9e-140 1
ZFIN|ZDB-GENE-040426-2649 - symbol:sec13 "SEC13 homolog (... 882 2.5e-88 1
UNIPROTKB|E1BVC4 - symbol:SEC13 "Uncharacterized protein"... 877 8.6e-88 1
UNIPROTKB|F1PDM3 - symbol:SEC13 "Uncharacterized protein"... 875 1.4e-87 1
MGI|MGI:99832 - symbol:Sec13 "SEC13 homolog (S. cerevisia... 874 1.8e-87 1
RGD|1359555 - symbol:Sec13 "SEC13 homolog (S. cerevisiae)... 874 1.8e-87 1
UNIPROTKB|Q3ZCC9 - symbol:SEC13 "Protein SEC13 homolog" s... 867 9.9e-87 1
UNIPROTKB|P55735 - symbol:SEC13 "Protein SEC13 homolog" s... 862 3.3e-86 1
FB|FBgn0024509 - symbol:Sec13 "Sec13 ortholog (S. cerevis... 822 5.8e-82 1
DICTYBASE|DDB_G0292052 - symbol:sec13 "putative transport... 817 2.0e-81 1
ASPGD|ASPL0000075365 - symbol:sec13 species:162425 "Emeri... 734 1.2e-72 1
POMBASE|SPBC215.15 - symbol:sec13 "COPII-coated vesicle c... 722 2.3e-71 1
CGD|CAL0004667 - symbol:SEC13 species:5476 "Candida albic... 696 1.3e-68 1
SGD|S000004198 - symbol:SEC13 "Structural component of 3 ... 679 8.2e-67 1
UNIPROTKB|A8XJ40 - symbol:npp-20 "Protein SEC13 homolog" ... 573 1.4e-55 1
UNIPROTKB|E3NCB9 - symbol:Cre-npp-20 "CRE-NPP-20 protein"... 559 4.3e-54 1
WB|WBGene00003806 - symbol:npp-20 species:6239 "Caenorhab... 546 1.0e-52 1
UNIPROTKB|Q9N4A7 - symbol:npp-20 "Protein SEC13 homolog" ... 546 1.0e-52 1
DICTYBASE|DDB_G0277257 - symbol:DDB_G0277257 "Nucleoporin... 319 1.0e-45 2
UNIPROTKB|F1SQA9 - symbol:SEC13 "Uncharacterized protein"... 468 1.9e-44 1
CGD|CAL0005451 - symbol:orf19.2186 species:5476 "Candida ... 254 4.0e-37 2
UNIPROTKB|Q5A2S9 - symbol:SEH1 "Putative uncharacterized ... 254 4.0e-37 2
SGD|S000003068 - symbol:SEH1 "Component of two distinct c... 302 9.2e-36 2
UNIPROTKB|Q6GNF1 - symbol:seh1l-b "Nucleoporin seh1-B" sp... 339 8.8e-31 1
UNIPROTKB|Q4FZW5 - symbol:seh1l-a "Nucleoporin seh1-A" sp... 339 8.8e-31 1
UNIPROTKB|Q5U4Y8 - symbol:seh1l "Nucleoporin seh1" specie... 338 1.1e-30 1
UNIPROTKB|E1BYP7 - symbol:SEH1L "Uncharacterized protein"... 337 1.4e-30 1
UNIPROTKB|Q96EE3 - symbol:SEH1L "Nucleoporin SEH1" specie... 336 1.8e-30 1
UNIPROTKB|Q5RAN6 - symbol:SEH1L "Nucleoporin SEH1" specie... 336 1.8e-30 1
UNIPROTKB|A7YY75 - symbol:SEH1L "Nucleoporin SEH1" specie... 334 3.0e-30 1
MGI|MGI:1919374 - symbol:Seh1l "SEH1-like (S. cerevisiae"... 334 3.0e-30 1
POMBASE|SPAC15F9.02 - symbol:seh1 "nucleoporin Seh1" spec... 290 4.2e-30 2
UNIPROTKB|B3GEK9 - symbol:npp-20 "Nuclear pore complex pr... 330 7.9e-30 1
UNIPROTKB|C1BK83 - symbol:seh1l "Nucleoporin seh1" specie... 327 1.6e-29 1
FB|FBgn0033247 - symbol:Nup44A "Nucleoporin at 44A" speci... 319 1.2e-28 1
ZFIN|ZDB-GENE-030131-6689 - symbol:seh1l "SEH1-like (S. c... 317 1.9e-28 1
WB|WBGene00003804 - symbol:npp-18 species:6239 "Caenorhab... 237 1.9e-23 2
UNIPROTKB|Q17GR9 - symbol:Ciao1 "Probable cytosolic iron-... 261 1.6e-22 1
UNIPROTKB|B4QFZ8 - symbol:Ciao1 "Probable cytosolic iron-... 220 1.8e-21 2
UNIPROTKB|B0XAF3 - symbol:Ciao1 "Probable cytosolic iron-... 250 2.4e-21 1
UNIPROTKB|B4P7Q3 - symbol:Ciao1 "Probable cytosolic iron-... 215 7.4e-21 2
UNIPROTKB|B4LJT7 - symbol:Ciao1 "Probable cytosolic iron-... 245 8.0e-21 1
UNIPROTKB|B4HRQ6 - symbol:Ciao1 "Probable cytosolic iron-... 220 9.0e-21 2
FB|FBgn0033972 - symbol:Ciao1 "Ciao1" species:7227 "Droso... 219 9.5e-21 2
UNIPROTKB|B3NQR5 - symbol:Ciao1 "Probable cytosolic iron-... 214 1.7e-20 2
UNIPROTKB|Q7PS24 - symbol:Ciao1 "Probable cytosolic iron-... 241 2.1e-20 1
UNIPROTKB|B4JW81 - symbol:Ciao1 "Probable cytosolic iron-... 240 2.7e-20 1
UNIPROTKB|B4MY77 - symbol:Ciao1 "Probable cytosolic iron-... 233 1.5e-19 1
UNIPROTKB|B4KTK4 - symbol:Ciao1 "Probable cytosolic iron-... 231 2.5e-19 1
UNIPROTKB|I3LR40 - symbol:SEH1L "Uncharacterized protein"... 230 3.1e-19 1
SGD|S000002675 - symbol:CIA1 "Component of cytosolic iron... 226 8.3e-19 1
ZFIN|ZDB-GENE-040426-839 - symbol:ciao1 "cytosolic iron-s... 196 2.7e-17 2
UNIPROTKB|A7RWD2 - symbol:v1g226592 "Probable cytosolic i... 168 3.3e-17 2
MGI|MGI:1346998 - symbol:Ciao1 "cytosolic iron-sulfur pro... 178 6.3e-17 2
RGD|1307285 - symbol:Ciao1 "cytosolic iron-sulfur protein... 183 8.0e-17 2
UNIPROTKB|B4GDM7 - symbol:Ciao1 "Probable cytosolic iron-... 215 1.6e-16 1
UNIPROTKB|B5X9P2 - symbol:ciao1a "Probable cytosolic iron... 184 2.8e-16 2
UNIPROTKB|Q292E8 - symbol:Ciao1 "Probable cytosolic iron-... 213 3.6e-16 1
UNIPROTKB|B3MC74 - symbol:Ciao1 "Probable cytosolic iron-... 211 7.0e-16 1
UNIPROTKB|O76071 - symbol:CIAO1 "Probable cytosolic iron-... 180 1.3e-15 2
UNIPROTKB|Q5DFU0 - symbol:Q5DFU0 "Probable cytosolic iron... 210 1.4e-15 1
UNIPROTKB|Q32PJ6 - symbol:CIAO1 "Probable cytosolic iron-... 182 2.7e-15 2
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 215 3.9e-15 1
UNIPROTKB|B5X212 - symbol:ciao1b "Probable cytosolic iron... 203 1.0e-14 1
FB|FBgn0021874 - symbol:Nle "Notchless" species:7227 "Dro... 140 5.7e-14 2
DICTYBASE|DDB_G0269728 - symbol:ciao1 "putative cytosolic... 197 6.5e-14 1
FB|FBgn0015754 - symbol:Lis-1 "Lissencephaly-1" species:7... 195 2.6e-13 1
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 195 3.0e-13 1
UNIPROTKB|F1NII4 - symbol:NLE1 "Uncharacterized protein" ... 156 2.0e-12 2
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 195 2.9e-12 1
UNIPROTKB|F1SU35 - symbol:CIAO1 "Uncharacterized protein"... 170 5.0e-12 2
RGD|1308301 - symbol:Nle1 "notchless homolog 1 (Drosophil... 164 5.5e-12 2
UNIPROTKB|B7QKS1 - symbol:ISCW023049 "Probable cytosolic ... 180 7.7e-12 1
MGI|MGI:2429770 - symbol:Nle1 "notchless homolog 1 (Droso... 160 1.7e-11 2
UNIPROTKB|Q9NVX2 - symbol:NLE1 "Notchless protein homolog... 154 2.1e-11 2
ZFIN|ZDB-GENE-040116-2 - symbol:pafah1b1a "platelet-activ... 178 3.1e-11 1
TAIR|locus:2014210 - symbol:SEH1H "AT1G64350" species:370... 175 3.6e-11 1
ZFIN|ZDB-GENE-041114-104 - symbol:tbl3 "transducin (beta)... 148 3.7e-11 2
UNIPROTKB|Q28DW0 - symbol:ciao1 "Probable cytosolic iron-... 175 3.8e-11 1
UNIPROTKB|G4MUS8 - symbol:MGG_01677 "Nuclear pore complex... 118 4.4e-11 3
UNIPROTKB|E1BV27 - symbol:TBL1X "Uncharacterized protein"... 147 5.7e-11 2
MGI|MGI:1336172 - symbol:Tbl1x "transducin (beta)-like 1 ... 142 8.9e-11 2
RGD|1563868 - symbol:Tbl1x "transducin (beta)-like 1 X-li... 142 8.9e-11 2
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 174 9.3e-11 1
UNIPROTKB|Q32SG6 - symbol:Q32SG6 "Protein HIRA" species:4... 179 1.0e-10 1
UNIPROTKB|A4R7U3 - symbol:CIA1 "Probable cytosolic iron-s... 162 1.2e-10 2
UNIPROTKB|Q58D20 - symbol:NLE1 "Notchless protein homolog... 151 1.6e-10 2
UNIPROTKB|F1PUU2 - symbol:NLE1 "Uncharacterized protein" ... 150 1.8e-10 2
POMBASE|SPAC806.02c - symbol:SPAC806.02c "Par A family AT... 174 2.0e-10 1
UNIPROTKB|Q4R8H1 - symbol:TBL1X "F-box-like/WD repeat-con... 129 2.4e-10 2
UNIPROTKB|O60907 - symbol:TBL1X "F-box-like/WD repeat-con... 131 2.5e-10 2
UNIPROTKB|I3LTI2 - symbol:NLE1 "Uncharacterized protein" ... 150 2.7e-10 2
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 167 3.9e-10 1
UNIPROTKB|C3UJQ7 - symbol:TBL1Y "Transducin (Beta)-like 1... 137 4.3e-10 2
UNIPROTKB|B3RNR8 - symbol:TRIADDRAFT_20668 "Probable cyto... 165 5.0e-10 1
UNIPROTKB|P43033 - symbol:PAFAH1B1 "Platelet-activating f... 167 6.1e-10 1
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 167 6.1e-10 1
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 167 6.1e-10 1
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 167 6.1e-10 1
WARNING: Descriptions of 481 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2045648 [details] [associations]
symbol:AT2G30050 "AT2G30050" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005643 "nuclear pore"
evidence=IDA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0009651 "response to salt stress" evidence=RCA] [GO:0006900
"membrane budding" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005643 EMBL:AC004680 EMBL:AC004165 UniGene:At.25577
HOGENOM:HOG000216895 KO:K14004 OMA:IKLWKEE EMBL:AF412112
EMBL:AY124848 IPI:IPI00529872 PIR:T00593 RefSeq:NP_180566.1
UniGene:At.74333 ProteinModelPortal:O64740 SMR:O64740 IntAct:O64740
STRING:O64740 PaxDb:O64740 PRIDE:O64740 ProMEX:O64740
EnsemblPlants:AT2G30050.1 GeneID:817556 KEGG:ath:AT2G30050
TAIR:At2g30050 InParanoid:O64740 PhylomeDB:O64740
ProtClustDB:CLSN2683847 ArrayExpress:O64740 Genevestigator:O64740
Uniprot:O64740
Length = 302
Score = 1382 (491.5 bits), Expect = 2.6e-141, P = 2.6e-141
Identities = 251/302 (83%), Positives = 270/302 (89%)
Query: 1 MPAQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSA-SQHLATLKGHRGPVW 59
MP QKIETGHED VHDV MD+YGKR+ATASSD +IKI G+SN+ SQ LATL GHRGPVW
Sbjct: 1 MPGQKIETGHEDIVHDVQMDYYGKRIATASSDCTIKITGVSNNGGSQQLATLTGHRGPVW 60
Query: 60 QVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSL 119
+VAWAHPK+GSILASCSYDGQVI+WKEGNQN WTQ H F DHKSSVNSIAWAPH++GLSL
Sbjct: 61 EVAWAHPKYGSILASCSYDGQVILWKEGNQNQWTQDHVFTDHKSSVNSIAWAPHDIGLSL 120
Query: 120 ACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLA 179
ACGSSDGNISVFTA ADGGWDT+RIDQAHPVGVTSVSWAPA APGALV GLLDPV KLA
Sbjct: 121 ACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPATAPGALVSSGLLDPVYKLA 180
Query: 180 SCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVI 239
S GCDNTVKVWK+ NG WKMDCFPALQ H+DWVR VAWAPNLGLPKSTIAS SQDG V+I
Sbjct: 181 SGGCDNTVKVWKLANGSWKMDCFPALQKHTDWVRDVAWAPNLGLPKSTIASGSQDGKVII 240
Query: 240 WTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVV 298
WT KEGEQWEG+VLKDF TPVW VSWSLTGNLLAV+D NN VT+WKEAVDGEW+QV+ V
Sbjct: 241 WTVGKEGEQWEGKVLKDFMTPVWRVSWSLTGNLLAVSDGNNNVTVWKEAVDGEWEQVTAV 300
Query: 299 EP 300
EP
Sbjct: 301 EP 302
>TAIR|locus:2100267 [details] [associations]
symbol:AT3G01340 "AT3G01340" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006886 "intracellular
protein transport" evidence=ISS] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006900 "membrane budding" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 EMBL:CP002686 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 EMBL:AC010676
HOGENOM:HOG000216895 KO:K14004 ProtClustDB:CLSN2683847
EMBL:AF370262 EMBL:AY063079 IPI:IPI00528696 RefSeq:NP_001030616.1
RefSeq:NP_186783.1 UniGene:At.18565 ProteinModelPortal:Q9SRI1
SMR:Q9SRI1 IntAct:Q9SRI1 STRING:Q9SRI1 PRIDE:Q9SRI1 ProMEX:Q9SRI1
DNASU:821216 EnsemblPlants:AT3G01340.1 EnsemblPlants:AT3G01340.2
GeneID:821216 KEGG:ath:AT3G01340 TAIR:At3g01340 InParanoid:Q9SRI1
OMA:KIDQAHP PhylomeDB:Q9SRI1 ArrayExpress:Q9SRI1
Genevestigator:Q9SRI1 Uniprot:Q9SRI1
Length = 302
Score = 1374 (488.7 bits), Expect = 1.9e-140, P = 1.9e-140
Identities = 247/302 (81%), Positives = 269/302 (89%)
Query: 1 MPAQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSA-SQHLATLKGHRGPVW 59
MP QKIETGH DT+HDV MD+YGKR+ATASSD +IKI G+SNS SQHLATL GHRGPVW
Sbjct: 1 MPPQKIETGHSDTIHDVVMDYYGKRVATASSDCTIKITGVSNSGGSQHLATLTGHRGPVW 60
Query: 60 QVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSL 119
QVAWAHPKFGS+LASCSYDGQ+I+WKEGNQN WTQAH F DHK SVNSIAWAPHELGLSL
Sbjct: 61 QVAWAHPKFGSLLASCSYDGQIILWKEGNQNQWTQAHVFTDHKVSVNSIAWAPHELGLSL 120
Query: 120 ACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLA 179
ACG+SDGNISVF+A ADGGWDTT+IDQAHPVGVTSVSWAPA PGALV G++DPV KLA
Sbjct: 121 ACGASDGNISVFSARADGGWDTTKIDQAHPVGVTSVSWAPATEPGALVSSGMIDPVYKLA 180
Query: 180 SCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVI 239
S GCD+TVKVWK NG WKMDCFPAL H+DWVR VAWAPNLGLPKSTIAS S+DG V+I
Sbjct: 181 SGGCDSTVKVWKFSNGSWKMDCFPALNKHTDWVRDVAWAPNLGLPKSTIASGSEDGKVII 240
Query: 240 WTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVV 298
WT KEGEQWEG VLKDFKTPVW VSWSLTGNLLAV+D NN VT+WKE+VDGEW+QV+VV
Sbjct: 241 WTIGKEGEQWEGTVLKDFKTPVWRVSWSLTGNLLAVSDGNNNVTVWKESVDGEWEQVTVV 300
Query: 299 EP 300
EP
Sbjct: 301 EP 302
>ZFIN|ZDB-GENE-040426-2649 [details] [associations]
symbol:sec13 "SEC13 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0055123 "digestive system development"
evidence=IMP] [GO:0001889 "liver development" evidence=IMP]
[GO:0070971 "endoplasmic reticulum exit site" evidence=IDA]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
[GO:0051216 "cartilage development" evidence=IMP] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=ISS] [GO:0070278
"extracellular matrix constituent secretion" evidence=IMP]
[GO:0005622 "intracellular" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-040426-2649
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0001889 GO:GO:0051216
GO:GO:0006888 GO:GO:0007029 GO:GO:0055123 GO:GO:0070278
GO:GO:0070971 CTD:6396 GeneTree:ENSGT00550000075049
HOGENOM:HOG000216895 HOVERGEN:HBG057343 KO:K14004 EMBL:BX537350
EMBL:BC054585 EMBL:BC153483 EMBL:CT027575 IPI:IPI00513236
RefSeq:NP_998500.1 UniGene:Dr.5496 STRING:Q7T2E1
Ensembl:ENSDART00000077063 GeneID:798071 KEGG:dre:798071
InParanoid:Q7T2E1 OMA:ISWAPAT NextBio:20933269 Uniprot:Q7T2E1
Length = 320
Score = 882 (315.5 bits), Expect = 2.5e-88, P = 2.5e-88
Identities = 163/298 (54%), Positives = 205/298 (68%)
Query: 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAH 65
++T HED +HD MD+YG RLAT SSD S+KI + N +A L+GH GPVWQVAWAH
Sbjct: 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVKNGGQILVADLRGHEGPVWQVAWAH 67
Query: 66 PKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD 125
P +G+ILASCSYD +VIIWKE N W + + + H SSVNS+ W P++ GL LACGSSD
Sbjct: 68 PMYGNILASCSYDRKVIIWKEENST-WDKMYEYTGHDSSVNSVCWGPYDFGLILACGSSD 126
Query: 126 GNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGL-LDP--VQKLASCG 182
G ISV T + DG WD +I+ AH +G +VSWAPA+ PG+L+ P +++ S G
Sbjct: 127 GAISVLTCSGDGHWDIKKINNAHTIGCNAVSWAPAVVPGSLIEQPTGQKPNYIKRFVSGG 186
Query: 183 CDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC 242
CDN VK+WK +G WK D L+ HSDWVR V WAP++GLP STIAS SQDG V IWTC
Sbjct: 187 CDNLVKLWKEEDGQWKED--QKLEAHSDWVRDVGWAPSIGLPTSTIASCSQDGRVFIWTC 244
Query: 243 AKE-GEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVV 298
G W ++L F VW VSWS+TGN+LAV+ +N VTLWKE+VDG+W +S V
Sbjct: 245 DDPAGNTWTAKLLHKFNDVVWHVSWSITGNILAVSGGDNKVTLWKESVDGQWACISDV 302
>UNIPROTKB|E1BVC4 [details] [associations]
symbol:SEC13 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000776 "kinetochore" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005635 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 CTD:6396
GeneTree:ENSGT00550000075049 KO:K14004 OMA:IKLWKEE
EMBL:AADN02014522 EMBL:AADN02014521 IPI:IPI00586706
RefSeq:XP_414450.3 UniGene:Gga.12581 ProteinModelPortal:E1BVC4
Ensembl:ENSGALT00000013715 GeneID:416119 KEGG:gga:416119
Uniprot:E1BVC4
Length = 320
Score = 877 (313.8 bits), Expect = 8.6e-88, P = 8.6e-88
Identities = 163/298 (54%), Positives = 205/298 (68%)
Query: 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAH 65
++T HED +HD MD+YG RLAT SSD S+KI + N +A L+GH GPVWQVAWAH
Sbjct: 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAH 67
Query: 66 PKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD 125
P +G+ILASCSYD +VIIWKE N W + + + H SSVNS+ WAPH+ GL LACGSSD
Sbjct: 68 PMYGNILASCSYDRKVIIWKEEN-GTWEKTYEYTGHDSSVNSVCWAPHDYGLILACGSSD 126
Query: 126 GNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGL-LDP--VQKLASCG 182
G IS+ + T DG W+ +I AH +G +VSWAPA+ PG+L+ P +++ AS G
Sbjct: 127 GAISLLSYTGDGQWEVKKISNAHTIGCNAVSWAPAVVPGSLIEQPSGQKPNYIKRFASGG 186
Query: 183 CDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC 242
CDN VK+WK +G WK + L+ HSDWVR VAWAP++GLP STIAS SQDG V IWTC
Sbjct: 187 CDNLVKIWKEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTC 244
Query: 243 AK-EGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVV 298
G W ++L F VW VSWS+T N+LAV+ +N VTLWKE+VDG W +S V
Sbjct: 245 DDASGSSWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGLWACISDV 302
>UNIPROTKB|F1PDM3 [details] [associations]
symbol:SEC13 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005635 "nuclear envelope" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005635 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 CTD:6396
GeneTree:ENSGT00550000075049 KO:K14004 OMA:IKLWKEE
EMBL:AAEX03012077 RefSeq:XP_850437.1 ProteinModelPortal:F1PDM3
Ensembl:ENSCAFT00000008242 GeneID:607653 KEGG:cfa:607653
NextBio:20893365 Uniprot:F1PDM3
Length = 322
Score = 875 (313.1 bits), Expect = 1.4e-87, P = 1.4e-87
Identities = 164/299 (54%), Positives = 206/299 (68%)
Query: 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAH 65
++T HED +HD MD+YG RLAT SSD S+KI + N +A L+GH GPVWQVAWAH
Sbjct: 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAH 67
Query: 66 PKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD 125
P +G+ILASCSYD +VIIWKE N W + H H SSVNS+ WAPH+ GL LACGSSD
Sbjct: 68 PMYGNILASCSYDRKVIIWKEEN-GTWEKTHEHTGHDSSVNSVCWAPHDYGLILACGSSD 126
Query: 126 GNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGL-LDP--VQKLASCG 182
G IS+ T T +G W+ +I+ AH +G +VSWAPA+ PG+L+ P ++K AS G
Sbjct: 127 GAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGG 186
Query: 183 CDNTVKVWKMY-NGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWT 241
CDN +K+WK +G WK + L+ HSDWVR VAWAP++GLP STIAS SQDG V IWT
Sbjct: 187 CDNLIKLWKEEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWT 244
Query: 242 CAK-EGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVV 298
C G W ++L F VW VSWS+T N+LAV+ +N VTLWKE+VDG+W +S V
Sbjct: 245 CDDTSGNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303
>MGI|MGI:99832 [details] [associations]
symbol:Sec13 "SEC13 homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=ISO] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0031080
"nuclear pore outer ring" evidence=ISO] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:99832 GO:GO:0012507 GO:GO:0000776 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031
eggNOG:COG2319 GO:GO:0006888 GO:GO:0051028 GO:GO:0031080 CTD:6396
GeneTree:ENSGT00550000075049 HOGENOM:HOG000216895
HOVERGEN:HBG057343 KO:K14004 OMA:IKLWKEE OrthoDB:EOG40P471
EMBL:AK003354 EMBL:AK009755 EMBL:BC002128 IPI:IPI00133920
RefSeq:NP_077168.2 UniGene:Mm.29296 ProteinModelPortal:Q9D1M0
SMR:Q9D1M0 IntAct:Q9D1M0 STRING:Q9D1M0 PhosphoSite:Q9D1M0
REPRODUCTION-2DPAGE:Q9D1M0 PaxDb:Q9D1M0 PRIDE:Q9D1M0 DNASU:110379
Ensembl:ENSMUST00000032440 GeneID:110379 KEGG:mmu:110379
UCSC:uc009dhm.1 InParanoid:Q9D1M0 NextBio:363887 Bgee:Q9D1M0
CleanEx:MM_SEC13 Genevestigator:Q9D1M0
GermOnline:ENSMUSG00000030298 Uniprot:Q9D1M0
Length = 322
Score = 874 (312.7 bits), Expect = 1.8e-87, P = 1.8e-87
Identities = 163/299 (54%), Positives = 207/299 (69%)
Query: 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAH 65
++T HED +HD MD+YG RLAT SSD S+KI + N +A L+GH GPVWQVAWAH
Sbjct: 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAH 67
Query: 66 PKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD 125
P +G+ILASCSYD +VIIWKE N W + H + H SSVNS+ WAPH+ GL LACGSSD
Sbjct: 68 PMYGNILASCSYDRKVIIWKEEN-GTWEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSD 126
Query: 126 GNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGL-LDP--VQKLASCG 182
G IS+ T T +G W+ +I+ AH +G +VSWAPA+ PG+L+ P ++K AS G
Sbjct: 127 GAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGG 186
Query: 183 CDNTVKVWKMY-NGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWT 241
CDN +K+W+ +G WK + L+ HSDWVR VAWAP++GLP STIAS SQDG V IWT
Sbjct: 187 CDNLIKLWREEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWT 244
Query: 242 CAK-EGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVV 298
C G W ++L F VW VSWS+T N+LAV+ +N VTLWKE+VDG+W +S V
Sbjct: 245 CDDASGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303
>RGD|1359555 [details] [associations]
symbol:Sec13 "SEC13 homolog (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0005635 "nuclear envelope" evidence=ISO]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IDA]
[GO:0012507 "ER to Golgi transport vesicle membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0031080 "nuclear
pore outer ring" evidence=ISO;ISS] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0000776 "kinetochore" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1359555 GO:GO:0012507 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031 eggNOG:COG2319
GO:GO:0006888 GO:GO:0051028 GO:GO:0031080 CTD:6396
GeneTree:ENSGT00550000075049 HOGENOM:HOG000216895
HOVERGEN:HBG057343 KO:K14004 OrthoDB:EOG40P471 EMBL:BC084705
IPI:IPI00364566 RefSeq:NP_001006979.1 UniGene:Rn.1553
ProteinModelPortal:Q5XFW8 SMR:Q5XFW8 STRING:Q5XFW8 PRIDE:Q5XFW8
Ensembl:ENSRNOT00000014377 GeneID:297522 KEGG:rno:297522
UCSC:RGD:1359555 InParanoid:Q5XFW8 NextBio:642376
Genevestigator:Q5XFW8 Uniprot:Q5XFW8
Length = 322
Score = 874 (312.7 bits), Expect = 1.8e-87, P = 1.8e-87
Identities = 163/299 (54%), Positives = 207/299 (69%)
Query: 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAH 65
++T HED +HD MD+YG RLAT SSD S+KI + N +A L+GH GPVWQVAWAH
Sbjct: 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAH 67
Query: 66 PKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD 125
P +G+ILASCSYD +VIIWKE N W + H + H SSVNS+ WAPH+ GL LACGSSD
Sbjct: 68 PMYGNILASCSYDRKVIIWKEEN-GTWEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSD 126
Query: 126 GNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGL-LDP--VQKLASCG 182
G IS+ T T +G W+ +I+ AH +G +VSWAPA+ PG+L+ P ++K AS G
Sbjct: 127 GAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGG 186
Query: 183 CDNTVKVWKMY-NGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWT 241
CDN +K+W+ +G WK + L+ HSDWVR VAWAP++GLP STIAS SQDG V IWT
Sbjct: 187 CDNLIKLWREEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWT 244
Query: 242 CAK-EGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVV 298
C G W ++L F VW VSWS+T N+LAV+ +N VTLWKE+VDG+W +S V
Sbjct: 245 CDDASGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303
>UNIPROTKB|Q3ZCC9 [details] [associations]
symbol:SEC13 "Protein SEC13 homolog" species:9913 "Bos
taurus" [GO:0031080 "nuclear pore outer ring" evidence=ISS]
[GO:0012507 "ER to Golgi transport vesicle membrane" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0012507 GO:GO:0000776 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031
eggNOG:COG2319 GO:GO:0051028 GO:GO:0031080 EMBL:BC102514
IPI:IPI00691005 RefSeq:NP_001069033.1 UniGene:Bt.62595
ProteinModelPortal:Q3ZCC9 SMR:Q3ZCC9 STRING:Q3ZCC9 PRIDE:Q3ZCC9
Ensembl:ENSBTAT00000023702 GeneID:512530 KEGG:bta:512530 CTD:6396
GeneTree:ENSGT00550000075049 HOGENOM:HOG000216895
HOVERGEN:HBG057343 InParanoid:Q3ZCC9 KO:K14004 OMA:IKLWKEE
OrthoDB:EOG40P471 NextBio:20870435 Uniprot:Q3ZCC9
Length = 322
Score = 867 (310.3 bits), Expect = 9.9e-87, P = 9.9e-87
Identities = 163/299 (54%), Positives = 205/299 (68%)
Query: 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAH 65
++T HED +HD MD+YG RLAT SSD S+KI + N +A L+GH GPVWQVAWAH
Sbjct: 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILVADLRGHEGPVWQVAWAH 67
Query: 66 PKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD 125
P +G+ILASCSYD +VIIWKE N W + H H SSVNS+ WAPH+ GL LACGSSD
Sbjct: 68 PMYGNILASCSYDRKVIIWKEEN-GTWEKTHEHTGHDSSVNSVCWAPHDYGLILACGSSD 126
Query: 126 GNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGL-LDP--VQKLASCG 182
G IS+ T T G W+ +I+ AH +G +VSWAPA+ PG+L+ P ++K AS G
Sbjct: 127 GAISLLTYTGLGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGG 186
Query: 183 CDNTVKVWKMY-NGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWT 241
CDN +K+WK +G WK + L+ HSDWVR VAWAP++GLP STIAS SQDG V +WT
Sbjct: 187 CDNLIKLWKEEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFVWT 244
Query: 242 CAK-EGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVV 298
C G W ++L F VW VSWS+T N+LAV+ +N VTLWKE+VDG+W +S V
Sbjct: 245 CDDASGNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303
>UNIPROTKB|P55735 [details] [associations]
symbol:SEC13 "Protein SEC13 homolog" species:9606 "Homo
sapiens" [GO:0051028 "mRNA transport" evidence=IEA] [GO:0031080
"nuclear pore outer ring" evidence=NAS;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0006886 "intracellular protein transport" evidence=NAS]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0000087 "M phase of
mitotic cell cycle" evidence=TAS] [GO:0000236 "mitotic
prometaphase" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0005789
"endoplasmic reticulum membrane" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=TAS] [GO:0012507 "ER to Golgi transport vesicle
membrane" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0018279 "protein N-linked
glycosylation via asparagine" evidence=TAS] [GO:0019886 "antigen
processing and presentation of exogenous peptide antigen via MHC
class II" evidence=TAS] [GO:0043687 "post-translational protein
modification" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] [GO:0048208 "COPII vesicle coating"
evidence=TAS] Reactome:REACT_11123 Reactome:REACT_17015
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 Reactome:REACT_6900 Reactome:REACT_115566
GO:GO:0006886 GO:GO:0012507 GO:GO:0002474 Reactome:REACT_21300
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0019886
GO:GO:0005789 eggNOG:COG2319 GO:GO:0043687 GO:GO:0018279
GO:GO:0051028 GO:GO:0000236 GO:GO:0048208 GO:GO:0031080 PDB:3BG0
PDB:3BG1 PDBsum:3BG0 PDBsum:3BG1 CTD:6396 HOGENOM:HOG000216895
HOVERGEN:HBG057343 KO:K14004 OrthoDB:EOG40P471 EMBL:L09260
EMBL:BC002634 EMBL:BC006167 EMBL:BC091506 IPI:IPI00479141
RefSeq:NP_001129704.1 RefSeq:NP_899195.1 UniGene:Hs.166924
ProteinModelPortal:P55735 SMR:P55735 DIP:DIP-39091N IntAct:P55735
MINT:MINT-1154053 STRING:P55735 PhosphoSite:P55735 DMDM:50403748
PaxDb:P55735 PRIDE:P55735 DNASU:6396 Ensembl:ENST00000337354
Ensembl:ENST00000350697 GeneID:6396 KEGG:hsa:6396 UCSC:uc003bvl.3
GeneCards:GC03M010335 HGNC:HGNC:10697 HPA:HPA035292 MIM:600152
neXtProt:NX_P55735 PharmGKB:PA35620 InParanoid:P55735
EvolutionaryTrace:P55735 GenomeRNAi:6396 NextBio:24846
ArrayExpress:P55735 Bgee:P55735 CleanEx:HS_SEC13
Genevestigator:P55735 GermOnline:ENSG00000157020 Uniprot:P55735
Length = 322
Score = 862 (308.5 bits), Expect = 3.3e-86, P = 3.3e-86
Identities = 161/299 (53%), Positives = 207/299 (69%)
Query: 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAH 65
++T HED +HD MD+YG RLAT SSD S+KI + N +A L+GH GPVWQVAWAH
Sbjct: 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAH 67
Query: 66 PKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD 125
P +G+ILASCSYD +VIIW+E N W ++H H SSVNS+ WAPH+ GL LACGSSD
Sbjct: 68 PMYGNILASCSYDRKVIIWREEN-GTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSD 126
Query: 126 GNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVG--LGLL-DPVQKLASCG 182
G IS+ T T +G W+ +I+ AH +G +VSWAPA+ PG+L+ G + +++ AS G
Sbjct: 127 GAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGG 186
Query: 183 CDNTVKVWKMY-NGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWT 241
CDN +K+WK +G WK + L+ HSDWVR VAWAP++GLP STIAS SQDG V IWT
Sbjct: 187 CDNLIKLWKEEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWT 244
Query: 242 CAKEGEQ-WEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVV 298
C W ++L F VW VSWS+T N+LAV+ +N VTLWKE+VDG+W +S V
Sbjct: 245 CDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303
>FB|FBgn0024509 [details] [associations]
symbol:Sec13 "Sec13 ortholog (S. cerevisiae)" species:7227
"Drosophila melanogaster" [GO:0006900 "membrane budding"
evidence=ISS] [GO:0008363 "larval chitin-based cuticle development"
evidence=IMP] [GO:0035293 "chitin-based larval cuticle pattern
formation" evidence=IMP] [GO:0010629 "negative regulation of gene
expression" evidence=IDA] [GO:0031080 "nuclear pore outer ring"
evidence=ISS] [GO:0007184 "SMAD protein import into nucleus"
evidence=IMP] [GO:0006607 "NLS-bearing substrate import into
nucleus" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
GO:GO:0010629 GO:GO:0007184 GO:GO:0035293 EMBL:AF160909
ProteinModelPortal:Q7KLW8 STRING:Q7KLW8 PaxDb:Q7KLW8 PRIDE:Q7KLW8
FlyBase:FBgn0024509 InParanoid:Q7KLW8 OrthoDB:EOG46T1H2
ArrayExpress:Q7KLW8 Bgee:Q7KLW8 Uniprot:Q7KLW8
Length = 386
Score = 822 (294.4 bits), Expect = 5.8e-82, P = 5.8e-82
Identities = 154/298 (51%), Positives = 202/298 (67%)
Query: 4 QKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAW 63
Q+I+T HED VH A+DFYG LAT SSD S++I S ++ LA LKGH+GPVWQVAW
Sbjct: 36 QEIDTEHEDMVHHAALDFYGLLLATCSSDGSVRIFH-SRKNNKALAELKGHQGPVWQVAW 94
Query: 64 AHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGS 123
AHPKFG+ILASCSYD +VI+WK DWT+ + +++H SSVNS+ +AP E GL LAC S
Sbjct: 95 AHPKFGNILASCSYDRKVIVWKSTTPRDWTKLYEYSNHDSSVNSVDFAPSEYGLVLACAS 154
Query: 124 SDGNISVFTATADGG-WDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLD---PVQKLA 179
SDG++SV T + G WD +I AH +GV ++SW PA AP + V++L
Sbjct: 155 SDGSVSVLTCNTEYGVWDAKKIPNAHTIGVNAISWCPAQAPDPAFDQRVTSRSAAVKRLV 214
Query: 180 SCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVI 239
S GCDN VK+W+ N W + L+ HSDWVR VAWAP++GLP+S IA+ASQD V++
Sbjct: 215 SGGCDNLVKIWREDNDRWVEE--HRLEAHSDWVRDVAWAPSIGLPRSQIATASQDRHVIV 272
Query: 240 WTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADA-NNVTLWKEAVDGEWQQVS 296
W+ + +W VL F VWS+SWS TGN+LAV NNVTLWKE +G+W +++
Sbjct: 273 WSSNADLSEWTSTVLHTFDDAVWSISWSTTGNILAVTGGDNNVTLWKENTEGQWIRIN 330
>DICTYBASE|DDB_G0292052 [details] [associations]
symbol:sec13 "putative transport protein"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0030127 "COPII vesicle coat"
evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0005643 "nuclear pore" evidence=IEA;ISS]
[GO:0051028 "mRNA transport" evidence=IEA] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0012507 "ER to Golgi
transport vesicle membrane" evidence=IEA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0292052 GenomeReviews:CM000155_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005789
EMBL:AAFI02000187 GO:GO:0015031 eggNOG:COG2319 GO:GO:0005643
GO:GO:0006888 GO:GO:0051028 GO:GO:0030127 KO:K14004 OMA:IKLWKEE
RefSeq:XP_629794.1 ProteinModelPortal:Q54DS8 SMR:Q54DS8
STRING:Q54DS8 PRIDE:Q54DS8 EnsemblProtists:DDB0235182
GeneID:8628472 KEGG:ddi:DDB_G0292052 ProtClustDB:CLSZ2429468
Uniprot:Q54DS8
Length = 301
Score = 817 (292.7 bits), Expect = 2.0e-81, P = 2.0e-81
Identities = 154/303 (50%), Positives = 199/303 (65%)
Query: 1 MPAQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQ 60
M Q +++GHED VHD D+YGK LAT SSD IKI + QHL L+GH GPVWQ
Sbjct: 1 MATQNVDSGHEDMVHDAQFDYYGKFLATCSSDKMIKIFDVGGENPQHLVDLRGHEGPVWQ 60
Query: 61 VAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLA 120
VAWAHPKFG ILAS SYD +VI+WKE N W+ H + H+ SVNSI+WAPHE GLSLA
Sbjct: 61 VAWAHPKFGKILASASYDRKVIVWKEVGNNSWSIIHQYAGHELSVNSISWAPHEFGLSLA 120
Query: 121 CGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLG---LLDPVQK 177
C SSDG++++ + W+ + Q +GV SVSW+PA P +LV + P+++
Sbjct: 121 CASSDGSVTIHNYN-NNVWEAPQKIQVSQIGVNSVSWSPAAIPTSLVNSANTIIPAPIKR 179
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
+ + CDN +K++K W +D L+ H DWVR VAWAPN+GLP S IAS SQD +V
Sbjct: 180 IVTGSCDNLIKIFKNVEDKWILD--KQLEDHKDWVRDVAWAPNIGLPYSKIASCSQDRSV 237
Query: 238 VIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVS 296
++WT + G W G+ L F VW VSWS+ GN+LAV+ +N VTLWKE VD EW+ +S
Sbjct: 238 IVWTQDENGV-WSGKPLPKFDDIVWRVSWSVIGNILAVSCGDNQVTLWKEGVDSEWKLIS 296
Query: 297 VVE 299
VE
Sbjct: 297 HVE 299
>ASPGD|ASPL0000075365 [details] [associations]
symbol:sec13 species:162425 "Emericella nidulans"
[GO:0005643 "nuclear pore" evidence=IDA] [GO:0031081 "nuclear pore
distribution" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0090114 "COPII-coated vesicle
budding" evidence=IEA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0030127 "COPII vesicle coat" evidence=IEA]
[GO:0031080 "nuclear pore outer ring" evidence=IEA] [GO:0035859
"Seh1-associated complex" evidence=IEA] [GO:0005198 "structural
molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0012507 GO:GO:0016192
Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005643
EMBL:BN001303 GO:GO:0051028 EMBL:AACD01000075 HOGENOM:HOG000216895
KO:K14004 OMA:IKLWKEE RefSeq:XP_661921.1 ProteinModelPortal:Q5B563
SMR:Q5B563 STRING:Q5B563 EnsemblFungi:CADANIAT00006147
GeneID:2872114 KEGG:ani:AN4317.2 OrthoDB:EOG4QNR53 Uniprot:Q5B563
Length = 309
Score = 734 (263.4 bits), Expect = 1.2e-72, P = 1.2e-72
Identities = 151/310 (48%), Positives = 203/310 (65%)
Query: 3 AQKIE-TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQV 61
AQ I +GH+D +HD +D+YG+RLAT SSD +IKI + + + TLKGH GPVW V
Sbjct: 4 AQVISNSGHDDMIHDAGLDYYGRRLATCSSDKTIKIFEIEGDTHKLVETLKGHEGPVWCV 63
Query: 62 AWAHPKFGSILASCSYDGQVIIWKEGNQND--------WTQAHTFNDHKSSVNSIAWAPH 113
WAHPKFG+ILAS SYDG+V+IW+E +Q+ WT+ F+ H +SVN I+WAPH
Sbjct: 64 EWAHPKFGTILASSSYDGKVLIWREQHQSSTAPIGSGAWTKVFDFSLHTASVNMISWAPH 123
Query: 114 ELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGL-L 172
E G LAC SSDG++SV D W T +I AH +GV S+SWAPA +PG+LV +
Sbjct: 124 ETGCLLACASSDGHVSVLEFR-DNSW-THQIFHAHGMGVNSISWAPAASPGSLVSSNPGI 181
Query: 173 DPVQKLASCGCDNTVKVWKMYNGIWKM-DCFPALQMHSDWVRSVAWAPNLGLPKSTIASA 231
++ + G DN +K+W YN K + L+ HSDWVR VAW+P++ L KS IASA
Sbjct: 182 GQQRRFVTGGSDNLLKIWD-YNPETKTYNATQTLEGHSDWVRDVAWSPSI-LSKSYIASA 239
Query: 232 SQDGTVVIWTC-AKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVD 289
SQD TV +WT A QW +VL +F +W VSWS +GN+LAV+ +N V+LWKE +
Sbjct: 240 SQDKTVRVWTADASNPGQWTSQVL-EFDNVLWRVSWSPSGNILAVSGGDNKVSLWKENLR 298
Query: 290 GEWQQVSVVE 299
G+W++V +E
Sbjct: 299 GQWEKVKDIE 308
>POMBASE|SPBC215.15 [details] [associations]
symbol:sec13 "COPII-coated vesicle component Sec13"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005643 "nuclear pore" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006886
"intracellular protein transport" evidence=IC] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISO] [GO:0006999
"nuclear pore organization" evidence=ISO] [GO:0030127 "COPII
vesicle coat" evidence=ISO] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0071937 "barrier septum assembly involved in cell
cycle cytokinesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC215.15 GO:GO:0005829
GO:GO:0005886 GO:GO:0006886 Gene3D:2.130.10.10 PROSITE:PS00678
GO:GO:0005789 EMBL:CU329671 eggNOG:COG2319 GO:GO:0005643
GenomeReviews:CU329671_GR GO:GO:0006888 GO:GO:0051028 GO:GO:0071937
GO:GO:0030127 GO:GO:0006999 HOGENOM:HOG000216895 KO:K14004
OMA:IKLWKEE OrthoDB:EOG4QNR53 PIR:T39905 RefSeq:NP_596692.1
ProteinModelPortal:O94319 STRING:O94319 PRIDE:O94319
EnsemblFungi:SPBC215.15.1 GeneID:2540716 KEGG:spo:SPBC215.15
NextBio:20801838 Uniprot:O94319
Length = 297
Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
Identities = 143/294 (48%), Positives = 190/294 (64%)
Query: 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAH 65
++T H+D +HD +D+YGKRLAT SSD +IK+ + N+ L TL+GH GPVWQ+ WAH
Sbjct: 4 VDTQHDDMIHDAILDYYGKRLATCSSDQTIKVFSIENNQQTLLETLRGHSGPVWQLGWAH 63
Query: 66 PKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD 125
PKFG+ILAS SYDG VI+W+E W++ H++SVN+++WAPHE G LAC SSD
Sbjct: 64 PKFGTILASASYDGHVIVWRETG-GVWSELMDHTAHQASVNAVSWAPHEYGALLACASSD 122
Query: 126 GNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDN 185
G +SV DG DT RI AH G +V W+P G++VG +KLA+ GCDN
Sbjct: 123 GKVSVLEFKDDGSCDT-RIFTAHEPGCNAVCWSPPSLSGSVVGQSPAAGPKKLATAGCDN 181
Query: 186 TVKVWKMYNGI--WKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCA 243
VK+W G+ W ++ L H DW R VAWAP++GL K+ +ASASQD V IWT
Sbjct: 182 LVKIWAFDAGVNNWILE--DTLAGHVDWTRDVAWAPSVGLTKTYLASASQDKNVFIWT-- 237
Query: 244 KEGE-QWEGRVLKDFKTP--VWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQ 293
KEG+ W+ L + K P W VSWSL+GN+LAV+ +N V L+KE+ +WQ
Sbjct: 238 KEGDGPWQKTPLTEEKFPDIAWRVSWSLSGNILAVSCGDNKVYLFKES-QNKWQ 290
Score = 189 (71.6 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 71/242 (29%), Positives = 101/242 (41%)
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGN 127
+G LA+CS D + ++ N N T T H V + WA + G LA S DG+
Sbjct: 20 YGKRLATCSSDQTIKVFSIEN-NQQTLLETLRGHSGPVWQLGWAHPKFGTILASASYDGH 78
Query: 128 ISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLD---PVQKLASCG-C 183
+ V+ T G W AH V +VSWAP GAL+ D V + G C
Sbjct: 79 VIVWRETG-GVWSELMDHTAHQASVNAVSWAPHEY-GALLACASSDGKVSVLEFKDDGSC 136
Query: 184 DNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCA 243
D +++ + C+ + V +P G PK +A+A D V IW
Sbjct: 137 DT--RIFTAHEPGCNAVCWSPPSLSGS---VVGQSPAAG-PKK-LATAGCDNLVKIWAFD 189
Query: 244 KEGEQW--EGRVLK--DFKTPV-WSVSWSLTGNLLAVADAN-NVTLWKEAVDGEWQQVSV 297
W E + D+ V W+ S LT LA A + NV +W + DG WQ+ +
Sbjct: 190 AGVNNWILEDTLAGHVDWTRDVAWAPSVGLTKTYLASASQDKNVFIWTKEGDGPWQKTPL 249
Query: 298 VE 299
E
Sbjct: 250 TE 251
>CGD|CAL0004667 [details] [associations]
symbol:SEC13 species:5476 "Candida albicans" [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0030127 "COPII
vesicle coat" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031080 "nuclear pore outer ring" evidence=IEA] [GO:0035859
"Seh1-associated complex" evidence=IEA] [GO:0031081 "nuclear pore
distribution" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0043547 "positive regulation
of GTPase activity" evidence=IEA] [GO:0090114 "COPII-coated vesicle
budding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0012507 GO:GO:0016192
Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031
eggNOG:COG2319 GO:GO:0005643 GO:GO:0051028 EMBL:AACQ01000027
EMBL:AACQ01000026 KO:K14004 RefSeq:XP_720011.1 RefSeq:XP_720143.1
ProteinModelPortal:Q5AEF2 SMR:Q5AEF2 STRING:Q5AEF2 GeneID:3638207
GeneID:3638425 KEGG:cal:CaO19.316 KEGG:cal:CaO19.7948
Uniprot:Q5AEF2
Length = 298
Score = 696 (250.1 bits), Expect = 1.3e-68, P = 1.3e-68
Identities = 141/300 (47%), Positives = 188/300 (62%)
Query: 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHL-ATLKGHRGPVWQVAWA 64
I H+D +HD +D+YGKRLAT SSD +IKI L + + L TL GH GPVWQV+WA
Sbjct: 4 IGNAHDDLIHDAVLDYYGKRLATCSSDKTIKIFDLDGTDNYKLITTLTGHEGPVWQVSWA 63
Query: 65 HPKFGSILASCSYDGQVIIWKEGNQND-WTQAHTFNDHKSSVNSIAWAPHELGLSLACGS 123
HPKFGSILASCSYDG+ +IWKE + W+ H++SVNS++WAPHELG L C S
Sbjct: 64 HPKFGSILASCSYDGKALIWKEQPETQQWSIIAEHTVHQASVNSVSWAPHELGAVLLCTS 123
Query: 124 SDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGC 183
SDG +SV DG D AH +G S +WAP L +++ SCG
Sbjct: 124 SDGKVSVVDFNDDGTTSHVIFD-AHAIGANSATWAPVSTSSK--DSAALKQQRRIVSCGS 180
Query: 184 DNTVKVWKMYNGIWKMDCFPA-LQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC 242
DN K+WK Y+ A L+ H+DWVR VAW+P+ L +S IA+ASQD TV+IWT
Sbjct: 181 DNLAKIWK-YDAANNTYVEEAKLEGHTDWVRDVAWSPS-NLIRSYIATASQDRTVLIWTQ 238
Query: 243 AKEGEQWEGRVLKDFKTP--VWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVVE 299
++G+ W+ ++L + K P W SWSL+GN+LAV+ +N V+LWKE + G+W+ V+
Sbjct: 239 DRDGK-WQKQLLTEEKFPDVCWRCSWSLSGNILAVSGGDNKVSLWKENLQGKWESAGEVD 297
>SGD|S000004198 [details] [associations]
symbol:SEC13 "Structural component of 3 distinct complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP] [GO:0031080 "nuclear pore
outer ring" evidence=IDA] [GO:0090114 "COPII-coated vesicle
budding" evidence=IMP] [GO:0030127 "COPII vesicle coat"
evidence=IDA] [GO:0005198 "structural molecule activity"
evidence=IDA;IMP] [GO:0005773 "vacuole" evidence=IEA] [GO:0005774
"vacuolar membrane" evidence=IEA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0012507 "ER to Golgi transport vesicle membrane"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0043547 "positive regulation of GTPase activity" evidence=IDA]
[GO:0035859 "Seh1-associated complex" evidence=IDA] [GO:0031081
"nuclear pore distribution" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000004198 GO:GO:0005774
GO:GO:0045893 Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0005789
GO:GO:0043547 GO:GO:0005198 GO:GO:0015031 eggNOG:COG2319
EMBL:BK006945 GO:GO:0030433 GO:GO:0051028 EMBL:U14913 GO:GO:0030127
GO:GO:0031080 GO:GO:0031081 GO:GO:0035859 PDB:3IKO PDBsum:3IKO
PDB:3JRO PDBsum:3JRO GeneTree:ENSGT00550000075049
HOGENOM:HOG000216895 KO:K14004 OMA:IKLWKEE OrthoDB:EOG4QNR53
EMBL:L05929 PIR:A45442 RefSeq:NP_013309.1 PDB:2PM6 PDB:2PM7
PDB:2PM9 PDB:3JRP PDB:3MZK PDB:3MZL PDBsum:2PM6 PDBsum:2PM7
PDBsum:2PM9 PDBsum:3JRP PDBsum:3MZK PDBsum:3MZL
ProteinModelPortal:Q04491 SMR:Q04491 DIP:DIP-1826N IntAct:Q04491
MINT:MINT-402427 STRING:Q04491 PaxDb:Q04491 PeptideAtlas:Q04491
EnsemblFungi:YLR208W GeneID:850905 KEGG:sce:YLR208W CYGD:YLR208w
EvolutionaryTrace:Q04491 NextBio:967299 Genevestigator:Q04491
GermOnline:YLR208W GO:GO:0090114 Uniprot:Q04491
Length = 297
Score = 679 (244.1 bits), Expect = 8.2e-67, P = 8.2e-67
Identities = 140/297 (47%), Positives = 183/297 (61%)
Query: 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAH 65
I H + +HD +D+YGKRLAT SSD +IKI + + + TL GH GPVW+V WAH
Sbjct: 4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAH 63
Query: 66 PKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD 125
PKFG+ILASCSYDG+V+IWKE N W+Q H +SVNS+ WAPHE G L SSD
Sbjct: 64 PKFGTILASCSYDGKVLIWKEENGR-WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD 122
Query: 126 GNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDN 185
G +SV +G ID AH +GV S SWAPA G + +K + G DN
Sbjct: 123 GKVSVVEFKENGTTSPIIID-AHAIGVNSASWAPATIEEDGEHNGTKES-RKFVTGGADN 180
Query: 186 TVKVWKMYNGIWKMDCFPA-LQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAK 244
VK+WK YN + + L+ HSDWVR VAW+P + L +S +AS SQD T +IWT
Sbjct: 181 LVKIWK-YNSDAQTYVLESTLEGHSDWVRDVAWSPTV-LLRSYLASVSQDRTCIIWTQDN 238
Query: 245 EGEQWEGRVLKDFKTP--VWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVV 298
E W+ +LK+ K P +W SWSL+GN+LA++ +N VTLWKE ++G+W+ V
Sbjct: 239 EQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEPAGEV 295
>UNIPROTKB|A8XJ40 [details] [associations]
symbol:npp-20 "Protein SEC13 homolog" species:6238
"Caenorhabditis briggsae" [GO:0000910 "cytokinesis" evidence=ISS]
[GO:0005643 "nuclear pore" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0012507 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005789
GO:GO:0015031 eggNOG:COG2319 GO:GO:0005643 GO:GO:0000910
GO:GO:0051028 HOGENOM:HOG000216895 EMBL:HE601467
ProteinModelPortal:A8XJ40 STRING:A8XJ40 EnsemblMetazoa:CBG13889
WormBase:CBG13889 Uniprot:A8XJ40
Length = 306
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 117/298 (39%), Positives = 170/298 (57%)
Query: 4 QKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLS-NSASQHLATLKGHRGPVWQVA 62
Q+I+T H D +HD ++ YG RLAT SD +KI + N S L L GH GPVW+V+
Sbjct: 6 QRIDTQHRDAIHDAQLNIYGNRLATCGSDRLVKIFEVRPNGQSYPLIELSGHNGPVWKVS 65
Query: 63 WAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACG 122
WAHPK+G +LAS SYD +VIIW+E N W + + + H++SV S+A+APH+ GL LA
Sbjct: 66 WAHPKYGGLLASASYDKKVIIWQEVNGR-WQKTYEWETHEASVTSVAFAPHQFGLMLASS 124
Query: 123 SSDGNISVFTATADGG-WDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQK--LA 179
S+DG I + A W ++RI H GV SVSWAP G DP K
Sbjct: 125 SADGTIGILRFDAQTQQWQSSRIQNCHDQGVNSVSWAP----------GTADPAGKKRFV 174
Query: 180 SCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVI 239
S G D VK+W + + + C A+ H D+VR AW P + +I S DG +V+
Sbjct: 175 SAGNDKLVKIWLLNEELNEWTCEKAIHCHKDFVREAAWCPVTNKGQHSIVSCGLDGNLVL 234
Query: 240 WTCAK-EGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVA-DANNVTLWKEAVDGEWQQV 295
+ A E +W+ ++L+ ++ S+S G+ L+V+ D N +TLW+E + G+W ++
Sbjct: 235 YRIADIETAEWKSKLLEQAPCALYHASFSPCGSFLSVSGDDNMITLWRENLQGQWIKI 292
>UNIPROTKB|E3NCB9 [details] [associations]
symbol:Cre-npp-20 "CRE-NPP-20 protein" species:31234
"Caenorhabditis remanei" [GO:0000910 "cytokinesis" evidence=ISS]
[GO:0005643 "nuclear pore" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005643 GO:GO:0000910 OMA:IKLWKEE EMBL:DS268594
RefSeq:XP_003093969.1 ProteinModelPortal:E3NCB9
EnsemblMetazoa:CRE15709 GeneID:9811680 CTD:9811680 Uniprot:E3NCB9
Length = 311
Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
Identities = 115/300 (38%), Positives = 176/300 (58%)
Query: 4 QKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLS-NSASQHLATLKGHRGPVWQVA 62
Q+I+T H D +HD ++ YG RLAT SD +KI + N S L L GH GPVW+V+
Sbjct: 6 QRIDTQHRDAIHDAQLNIYGNRLATCGSDRLVKIFEVRPNGQSYPLIELSGHNGPVWKVS 65
Query: 63 WAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACG 122
WAHPK+G +LAS +YD +VIIW+E N W +++ + H++S S+A+APH+ GL LA
Sbjct: 66 WAHPKYGGLLASAAYDKKVIIWQEINGR-WQKSYEWACHEASTTSVAFAPHQYGLWLASS 124
Query: 123 SSDGNISVFTA-TADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQK--LA 179
S+DG+I + + G W +++I + H GV SVSWAP A DP K L
Sbjct: 125 SADGDIGILRYDSVTGQWQSSKIQKCHEQGVNSVSWAPGSA----------DPTAKKRLV 174
Query: 180 SCGCDNTVKVW--KMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
S G D K+W + NG W+ L H+D+VR AW P + +I S +G +
Sbjct: 175 SAGNDKCAKIWVFQQTNGFWRK----LLNGHTDFVREAAWCPVTNKGQHSIVSCGLEGNL 230
Query: 238 VIWTCAK-EGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVA-DANNVTLWKEAVDGEWQQV 295
V++ + E ++W+ ++L+ P++ S+S G+ L+V+ D N +T+W+E + G+W +V
Sbjct: 231 VLYRNSNIETDEWKSKLLEKSPCPLYHASFSPCGSFLSVSGDDNMITIWRENLQGQWIKV 290
>WB|WBGene00003806 [details] [associations]
symbol:npp-20 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0032940
"secretion by cell" evidence=IMP] [GO:0006997 "nucleus
organization" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0006915 GO:GO:0012507 GO:GO:0002119
GO:GO:0032940 Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0005789
GO:GO:0015031 eggNOG:COG2319 GO:GO:0010171 GO:GO:0040011
GO:GO:0000003 GO:GO:0005643 GO:GO:0000910 GO:GO:0051028
GO:GO:0006997 GO:GO:0051169 GeneTree:ENSGT00550000075049
HOGENOM:HOG000216895 KO:K14004 OMA:IKLWKEE EMBL:FO081581
RefSeq:NP_500086.1 RefSeq:NP_500087.1 ProteinModelPortal:Q9N4A7
SMR:Q9N4A7 DIP:DIP-25859N IntAct:Q9N4A7 MINT:MINT-1089120
STRING:Q9N4A7 PaxDb:Q9N4A7 PRIDE:Q9N4A7 EnsemblMetazoa:Y77E11A.13a
GeneID:176957 KEGG:cel:CELE_Y77E11A.13 UCSC:Y77E11A.13b CTD:176957
WormBase:Y77E11A.13a WormBase:Y77E11A.13b InParanoid:Q9N4A7
NextBio:894734 ArrayExpress:Q9N4A7 Uniprot:Q9N4A7
Length = 313
Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
Identities = 115/300 (38%), Positives = 172/300 (57%)
Query: 4 QKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLS-NSASQHLATLKGHRGPVWQVA 62
Q+I+T H D +HD ++ YG RLAT SD +KI + N S +A L GH GPVW+V+
Sbjct: 6 QRIDTQHRDAIHDAQLNIYGSRLATCGSDRLVKIFEVRPNGQSYPMAELVGHSGPVWKVS 65
Query: 63 WAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACG 122
WAHPK+G +LAS SYD +VIIW E Q W +A+ + H++S +A+APH+ GL LA
Sbjct: 66 WAHPKYGGLLASASYDKKVIIWNE-QQGRWQKAYEWAAHEASTTCVAFAPHQYGLMLASA 124
Query: 123 SSDGNISVFTA-TADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQK--LA 179
S+DG+I + + W +++I + H GV SV WAP A DP K L
Sbjct: 125 SADGDIGILRYDNSSNEWISSKIQKCHEQGVNSVCWAPGSA----------DPAAKKRLV 174
Query: 180 SCGCDNTVKVWKMYNGI--WKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
S G D VK+W + W ++ L H+D+VR AW P + TI S +G +
Sbjct: 175 SAGNDKNVKIWAFDDATNEWILE--KTLAGHTDFVREAAWCPVTNNGQHTIVSCGMEGNL 232
Query: 238 VIWTCAK-EGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVA-DANNVTLWKEAVDGEWQQV 295
V++ + E E+W+ ++L+ ++ S+S G+ L+VA D N +T+W+E + G+W +V
Sbjct: 233 VLFRTSNIETEEWKAKLLETAPCALYHSSFSPCGSFLSVAGDDNVITIWRENLQGQWIKV 292
>UNIPROTKB|Q9N4A7 [details] [associations]
symbol:npp-20 "Protein SEC13 homolog" species:6239
"Caenorhabditis elegans" [GO:0003674 "molecular_function"
evidence=ND] [GO:0051169 "nuclear transport" evidence=IC]
[GO:0000910 "cytokinesis" evidence=IMP] [GO:0005643 "nuclear pore"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0006915 GO:GO:0012507 GO:GO:0002119
GO:GO:0032940 Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0005789
GO:GO:0015031 eggNOG:COG2319 GO:GO:0010171 GO:GO:0040011
GO:GO:0000003 GO:GO:0005643 GO:GO:0000910 GO:GO:0051028
GO:GO:0006997 GO:GO:0051169 GeneTree:ENSGT00550000075049
HOGENOM:HOG000216895 KO:K14004 OMA:IKLWKEE EMBL:FO081581
RefSeq:NP_500086.1 RefSeq:NP_500087.1 ProteinModelPortal:Q9N4A7
SMR:Q9N4A7 DIP:DIP-25859N IntAct:Q9N4A7 MINT:MINT-1089120
STRING:Q9N4A7 PaxDb:Q9N4A7 PRIDE:Q9N4A7 EnsemblMetazoa:Y77E11A.13a
GeneID:176957 KEGG:cel:CELE_Y77E11A.13 UCSC:Y77E11A.13b CTD:176957
WormBase:Y77E11A.13a WormBase:Y77E11A.13b InParanoid:Q9N4A7
NextBio:894734 ArrayExpress:Q9N4A7 Uniprot:Q9N4A7
Length = 313
Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
Identities = 115/300 (38%), Positives = 172/300 (57%)
Query: 4 QKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLS-NSASQHLATLKGHRGPVWQVA 62
Q+I+T H D +HD ++ YG RLAT SD +KI + N S +A L GH GPVW+V+
Sbjct: 6 QRIDTQHRDAIHDAQLNIYGSRLATCGSDRLVKIFEVRPNGQSYPMAELVGHSGPVWKVS 65
Query: 63 WAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACG 122
WAHPK+G +LAS SYD +VIIW E Q W +A+ + H++S +A+APH+ GL LA
Sbjct: 66 WAHPKYGGLLASASYDKKVIIWNE-QQGRWQKAYEWAAHEASTTCVAFAPHQYGLMLASA 124
Query: 123 SSDGNISVFTA-TADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQK--LA 179
S+DG+I + + W +++I + H GV SV WAP A DP K L
Sbjct: 125 SADGDIGILRYDNSSNEWISSKIQKCHEQGVNSVCWAPGSA----------DPAAKKRLV 174
Query: 180 SCGCDNTVKVWKMYNGI--WKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
S G D VK+W + W ++ L H+D+VR AW P + TI S +G +
Sbjct: 175 SAGNDKNVKIWAFDDATNEWILE--KTLAGHTDFVREAAWCPVTNNGQHTIVSCGMEGNL 232
Query: 238 VIWTCAK-EGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVA-DANNVTLWKEAVDGEWQQV 295
V++ + E E+W+ ++L+ ++ S+S G+ L+VA D N +T+W+E + G+W +V
Sbjct: 233 VLFRTSNIETEEWKAKLLETAPCALYHSSFSPCGSFLSVAGDDNVITIWRENLQGQWIKV 292
>DICTYBASE|DDB_G0277257 [details] [associations]
symbol:DDB_G0277257 "Nucleoporin SEH1" species:44689
"Dictyostelium discoideum" [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0277257 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AAFI02000019 KO:K14299 RefSeq:XP_642765.1
ProteinModelPortal:Q86K39 STRING:Q86K39 EnsemblProtists:DDB0169145
GeneID:8620954 KEGG:ddi:DDB_G0277257 InParanoid:Q86K39 OMA:TELEDHI
Uniprot:Q86K39
Length = 467
Score = 319 (117.4 bits), Expect = 1.0e-45, Sum P(2) = 1.0e-45
Identities = 71/183 (38%), Positives = 103/183 (56%)
Query: 5 KIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHL-ATLKGHRGPVWQVAW 63
++ T H+D +HDV+ DFYGKRLAT SSD IK+ +++ L A K H G VW++AW
Sbjct: 6 RLSTAHDDLIHDVSYDFYGKRLATCSSDQKIKVWDQNDNQKWELSAEWKAHSGSVWKLAW 65
Query: 64 AHPKFGSILASCSYDGQVIIWKEGN----QNDWT-QAHTFNDHKSSVNSIAWAPHELGLS 118
AHP++G ++ASCS+D V IW+E Q W +AH D + SV I +AP GL
Sbjct: 66 AHPEYGQVIASCSFDRTVCIWEESEDEKGQKKWQLKAHLV-DSRDSVTDIKFAPKSFGLR 124
Query: 119 LACGSSDGNISVFTATADGGWDT-TRIDQAHPVGVTS--VSWAPAMAPGALVGLGLLDPV 175
LA SSDG I ++ A T +++ TS +SW P+ ++ +G +P
Sbjct: 125 LATCSSDGYIRIYEAMDIMNLSQWTIVEEFESQKGTSNCISWNPSSYDKPMIAVGSNEPY 184
Query: 176 QKL 178
K+
Sbjct: 185 IKI 187
Score = 178 (67.7 bits), Expect = 1.0e-45, Sum P(2) = 1.0e-45
Identities = 42/122 (34%), Positives = 69/122 (56%)
Query: 182 GCDNTVKVWKMYNGIWKMDCFPALQMH-SDWVRSVAWAPNLGLPKSTIASASQDGTVVIW 240
G ++++ V N I+ + F + S + V WAPN+G IA+AS+D V IW
Sbjct: 334 GANSSINVSSGNNSIYSNNNFDSSSDGGSRAIHDVCWAPNMGRSYHLIATASKDHKVRIW 393
Query: 241 TCAKEGEQWEGR-VLK--DFKTPVWSVSWSLTGNLLAVA-DANNVTLWKEAVDGEWQQVS 296
+ + + E + V++ D K+ VW V W++TG +LA + D NV LWK ++GEW+ S
Sbjct: 394 KLSSDKSKMELKEVMRKDDHKSEVWRVEWNITGTILASSGDDGNVCLWKCNMNGEWKLFS 453
Query: 297 VV 298
++
Sbjct: 454 LI 455
Score = 139 (54.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 43/189 (22%), Positives = 82/189 (43%)
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGN 127
+G LA+CS D ++ +W + + W + + H SV +AWA E G +A S D
Sbjct: 23 YGKRLATCSSDQKIKVWDQNDNQKWELSAEWKAHSGSVWKLAWAHPEYGQVIASCSFDRT 82
Query: 128 ISVFTATADG-GWDTTRIDQAHPV----GVTSVSWAPAMAPGALVGLGLLDPVQKLASCG 182
+ ++ + D G ++ +AH V VT + +AP GL +LA+C
Sbjct: 83 VCIWEESEDEKGQKKWQL-KAHLVDSRDSVTDIKFAPK-------SFGL-----RLATCS 129
Query: 183 CDNTVKVWKMYN--GIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW 240
D +++++ + + + + ++W P+ K IA S + + IW
Sbjct: 130 SDGYIRIYEAMDIMNLSQWTIVEEFESQKGTSNCISWNPS-SYDKPMIAVGSNEPYIKIW 188
Query: 241 TCAKEGEQW 249
++ +W
Sbjct: 189 EYSETARKW 197
>UNIPROTKB|F1SQA9 [details] [associations]
symbol:SEC13 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005635 "nuclear envelope" evidence=IEA] [GO:0000776
"kinetochore" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005635 GO:GO:0000776 Gene3D:2.130.10.10
SUPFAM:SSF50978 GeneTree:ENSGT00550000075049 EMBL:CU469341
Ensembl:ENSSSCT00000012664 OMA:REISADH Uniprot:F1SQA9
Length = 158
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 84/145 (57%), Positives = 102/145 (70%)
Query: 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAH 65
++T HED +HD MD+YG RLAT SSD S+KI + N +A L+GH GPVWQVAWAH
Sbjct: 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAH 67
Query: 66 PKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD 125
P +G+ILASCSYD +VIIWKE N W + H H SSVNS+ WAPH+ GL LACGSSD
Sbjct: 68 PMYGNILASCSYDRKVIIWKEEN-GTWEKTHEHTGHDSSVNSVCWAPHDYGLILACGSSD 126
Query: 126 GNISVFTATADGGWDTTRIDQAHPV 150
G IS+ T T G W+ +I+ AH V
Sbjct: 127 GAISLLTYTGLGQWEVKKINNAHTV 151
Score = 119 (46.9 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 46/145 (31%), Positives = 62/145 (42%)
Query: 116 GLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPV 175
G LA SSD ++ +F +GG + H V V+WA M G +
Sbjct: 25 GTRLATCSSDRSVKIFDVR-NGGQILIADLRGHEGPVWQVAWAHPMY-GNI--------- 73
Query: 176 QKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPN-LGLPKSTIASASQD 234
LASC D V +WK NG W+ H V SV WAP+ GL +A S D
Sbjct: 74 --LASCSYDRKVIIWKEENGTWEKT--HEHTGHDSSVNSVCWAPHDYGL---ILACGSSD 126
Query: 235 GTVVIWTCAKEGEQWEGRVLKDFKT 259
G + + T G QWE + + + T
Sbjct: 127 GAISLLTYTGLG-QWEVKKINNAHT 150
>CGD|CAL0005451 [details] [associations]
symbol:orf19.2186 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0000329 "fungal-type vacuole membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0035859
"Seh1-associated complex" evidence=IEA] [GO:0031080 "nuclear pore
outer ring" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005451 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 EMBL:AACQ01000076 EMBL:AACQ01000075 KO:K14299
RefSeq:XP_715969.1 RefSeq:XP_716027.1 ProteinModelPortal:Q5A2S9
STRING:Q5A2S9 GeneID:3642290 GeneID:3642391 KEGG:cal:CaO19.2186
KEGG:cal:CaO19.9732 Uniprot:Q5A2S9
Length = 347
Score = 254 (94.5 bits), Expect = 4.0e-37, Sum P(2) = 4.0e-37
Identities = 54/142 (38%), Positives = 79/142 (55%)
Query: 2 PAQK-IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLA--TLKGHRGPV 58
PA K TGHE+ +HD+ DFYGK +AT SSD IK+ L ++ S + + K H +
Sbjct: 9 PAMKPFITGHEELIHDIKYDFYGKHIATVSSDQHIKVFDLDSATSSWILNDSWKAHDSSI 68
Query: 59 WQVAWAHPKFGS--ILASCSYDGQVIIWKE------GNQNDWTQAHTF-NDHKSSVNSIA 109
+++WAHP+F S I+ASCSYD V IW+E G+ W + T + + +
Sbjct: 69 AKISWAHPEFSSSKIIASCSYDRTVKIWQEQPDEMPGSGRRWLKLATLATESYGPIYDVC 128
Query: 110 WAPHELGLSLACGSSDGNISVF 131
+AP+ LG L C SDG ++
Sbjct: 129 FAPNHLGFKLGCVGSDGIFRIY 150
Score = 161 (61.7 bits), Expect = 4.0e-37, Sum P(2) = 4.0e-37
Identities = 38/100 (38%), Positives = 59/100 (59%)
Query: 205 LQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRV-----LKDFKT 259
L H+ +RSV+WAP++G IA+ +DG V I+ A E E + ++ L D K+
Sbjct: 232 LPEHNGLIRSVSWAPSMGRKYHLIATGCKDGFVRIFK-ATEQENGDLKIETLAKLNDHKS 290
Query: 260 PVWSVSWSLTGNLLAVA-DANNVTLWKEAVDGEWQQVSVV 298
VW VSW++TG +L+ A D + LWK + EW+ +SV+
Sbjct: 291 EVWRVSWNMTGTILSSAGDDGKLRLWKCSYLNEWKCMSVI 330
Score = 83 (34.3 bits), Expect = 5.9e-29, Sum P(2) = 5.9e-29
Identities = 28/100 (28%), Positives = 43/100 (43%)
Query: 152 VTSVSWAPAMAPGA-LVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSD 210
+ SVSWAP+M L+ G D G K + NG K++ L H
Sbjct: 239 IRSVSWAPSMGRKYHLIATGCKD--------GFVRIFKATEQENGDLKIETLAKLNDHKS 290
Query: 211 WVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWE 250
V V+W + + ++SA DG + +W C+ E W+
Sbjct: 291 EVWRVSW----NMTGTILSSAGDDGKLRLWKCSYLNE-WK 325
Score = 82 (33.9 bits), Expect = 3.2e-14, Sum P(2) = 3.2e-14
Identities = 26/93 (27%), Positives = 42/93 (45%)
Query: 101 HKSSVNSIAWAPHELGLSLACGSSDGNISVFTA-TADGGWDTTRIDQAHPVGVTSVSWA- 158
H+ ++ I + + G +A SSD +I VF +A W +AH + +SWA
Sbjct: 18 HEELIHDIKYDFY--GKHIATVSSDQHIKVFDLDSATSSWILNDSWKAHDSSIAKISWAH 75
Query: 159 PAMAPGALVGLGLLDPVQKLASCGCDNTVKVWK 191
P + ++ ASC D TVK+W+
Sbjct: 76 PEFSSSKII-----------ASCSYDRTVKIWQ 97
>UNIPROTKB|Q5A2S9 [details] [associations]
symbol:SEH1 "Putative uncharacterized protein SEH1"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005451 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 EMBL:AACQ01000076 EMBL:AACQ01000075 KO:K14299
RefSeq:XP_715969.1 RefSeq:XP_716027.1 ProteinModelPortal:Q5A2S9
STRING:Q5A2S9 GeneID:3642290 GeneID:3642391 KEGG:cal:CaO19.2186
KEGG:cal:CaO19.9732 Uniprot:Q5A2S9
Length = 347
Score = 254 (94.5 bits), Expect = 4.0e-37, Sum P(2) = 4.0e-37
Identities = 54/142 (38%), Positives = 79/142 (55%)
Query: 2 PAQK-IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLA--TLKGHRGPV 58
PA K TGHE+ +HD+ DFYGK +AT SSD IK+ L ++ S + + K H +
Sbjct: 9 PAMKPFITGHEELIHDIKYDFYGKHIATVSSDQHIKVFDLDSATSSWILNDSWKAHDSSI 68
Query: 59 WQVAWAHPKFGS--ILASCSYDGQVIIWKE------GNQNDWTQAHTF-NDHKSSVNSIA 109
+++WAHP+F S I+ASCSYD V IW+E G+ W + T + + +
Sbjct: 69 AKISWAHPEFSSSKIIASCSYDRTVKIWQEQPDEMPGSGRRWLKLATLATESYGPIYDVC 128
Query: 110 WAPHELGLSLACGSSDGNISVF 131
+AP+ LG L C SDG ++
Sbjct: 129 FAPNHLGFKLGCVGSDGIFRIY 150
Score = 161 (61.7 bits), Expect = 4.0e-37, Sum P(2) = 4.0e-37
Identities = 38/100 (38%), Positives = 59/100 (59%)
Query: 205 LQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRV-----LKDFKT 259
L H+ +RSV+WAP++G IA+ +DG V I+ A E E + ++ L D K+
Sbjct: 232 LPEHNGLIRSVSWAPSMGRKYHLIATGCKDGFVRIFK-ATEQENGDLKIETLAKLNDHKS 290
Query: 260 PVWSVSWSLTGNLLAVA-DANNVTLWKEAVDGEWQQVSVV 298
VW VSW++TG +L+ A D + LWK + EW+ +SV+
Sbjct: 291 EVWRVSWNMTGTILSSAGDDGKLRLWKCSYLNEWKCMSVI 330
Score = 83 (34.3 bits), Expect = 5.9e-29, Sum P(2) = 5.9e-29
Identities = 28/100 (28%), Positives = 43/100 (43%)
Query: 152 VTSVSWAPAMAPGA-LVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSD 210
+ SVSWAP+M L+ G D G K + NG K++ L H
Sbjct: 239 IRSVSWAPSMGRKYHLIATGCKD--------GFVRIFKATEQENGDLKIETLAKLNDHKS 290
Query: 211 WVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWE 250
V V+W + + ++SA DG + +W C+ E W+
Sbjct: 291 EVWRVSW----NMTGTILSSAGDDGKLRLWKCSYLNE-WK 325
Score = 82 (33.9 bits), Expect = 3.2e-14, Sum P(2) = 3.2e-14
Identities = 26/93 (27%), Positives = 42/93 (45%)
Query: 101 HKSSVNSIAWAPHELGLSLACGSSDGNISVFTA-TADGGWDTTRIDQAHPVGVTSVSWA- 158
H+ ++ I + + G +A SSD +I VF +A W +AH + +SWA
Sbjct: 18 HEELIHDIKYDFY--GKHIATVSSDQHIKVFDLDSATSSWILNDSWKAHDSSIAKISWAH 75
Query: 159 PAMAPGALVGLGLLDPVQKLASCGCDNTVKVWK 191
P + ++ ASC D TVK+W+
Sbjct: 76 PEFSSSKII-----------ASCSYDRTVKIWQ 97
>SGD|S000003068 [details] [associations]
symbol:SEH1 "Component of two distinct complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0005773 "vacuole"
evidence=IEA] [GO:0035859 "Seh1-associated complex" evidence=IDA]
[GO:0031080 "nuclear pore outer ring" evidence=IDA] [GO:0017056
"structural constituent of nuclear pore" evidence=IC] [GO:0005643
"nuclear pore" evidence=IEA;IDA] [GO:0006913 "nucleocytoplasmic
transport" evidence=IC] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0000329 "fungal-type vacuole membrane"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=ISM]
[GO:0005774 "vacuolar membrane" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000003068 GO:GO:0005886
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 EMBL:BK006941
GO:GO:0015031 eggNOG:COG2319 GO:GO:0006913 GO:GO:0000329
GO:GO:0051028 TCDB:9.A.14.1.1 GO:GO:0031080 GO:GO:0035859
GO:GO:0017056 PDB:3EWE PDB:3F3F PDB:3F3G PDB:3F3P PDBsum:3EWE
PDBsum:3F3F PDBsum:3F3G PDBsum:3F3P KO:K14299
GeneTree:ENSGT00550000074999 HOGENOM:HOG000216896 OMA:YEAPDIM
OrthoDB:EOG418FX3 EMBL:X90994 EMBL:Z72622 EMBL:AY558497 PIR:S62137
RefSeq:NP_011415.1 ProteinModelPortal:P53011 SMR:P53011
DIP:DIP-4193N IntAct:P53011 MINT:MINT-547303 STRING:P53011
PaxDb:P53011 PeptideAtlas:P53011 EnsemblFungi:YGL100W GeneID:852778
KEGG:sce:YGL100W CYGD:YGL100w EvolutionaryTrace:P53011
NextBio:972254 Genevestigator:P53011 GermOnline:YGL100W
Uniprot:P53011
Length = 349
Score = 302 (111.4 bits), Expect = 9.2e-36, Sum P(2) = 9.2e-36
Identities = 78/251 (31%), Positives = 123/251 (49%)
Query: 4 QKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQ-HLA-TLKGHRGPVWQV 61
Q ++GH+D VHDV DFYG+ +AT SSD IK+ L S L+ + + H + +
Sbjct: 2 QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAI 61
Query: 62 AWAHPKFGSILASCSYDGQVIIWKEG-NQND-----WTQAHTFNDHKSSVNSIAWAPHEL 115
WA P++G I+AS SYD V +W+E +Q + W + T ND K S+ S+ +AP L
Sbjct: 62 DWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHL 121
Query: 116 GLSLACGSSDGNISVFTATADG---GWDTT---RIDQAHPVGVTSVSWAPAMAPGALVGL 169
GL LAC +DG + ++ A W T ++ P + + P
Sbjct: 122 GLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRF--- 178
Query: 170 GLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIA 229
P +KLA + + + +G K+ L H +RS++WAP++G IA
Sbjct: 179 ---SP-EKLAVSALEQAIIYQRGKDG--KLHVAAKLPGHKSLIRSISWAPSIGRWYQLIA 232
Query: 230 SASQDGTVVIW 240
+ +DG + I+
Sbjct: 233 TGCKDGRIRIF 243
Score = 145 (56.1 bits), Expect = 4.4e-14, Sum P(2) = 4.4e-14
Identities = 54/222 (24%), Positives = 99/222 (44%)
Query: 53 GHRGPVWQVAWAHPKFGSILASCSYDGQVIIWK-EGNQNDWTQAHTFNDHKSSVNSIAWA 111
GH V V + +G +A+CS D + ++K + + ++W + ++ H SS+ +I WA
Sbjct: 7 GHDDLVHDVVYDF--YGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWA 64
Query: 112 PHELGLSLACGSSDGNISVFTATAD----GG--WDTTRIDQAHPVGVTSVSWAPAMAPGA 165
E G +A S D + ++ D G W+ + SV +APA
Sbjct: 65 SPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLK 124
Query: 166 LVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPK 225
L LG D + +L + ++ W + + + + PA + SD+ S W P+ P+
Sbjct: 125 LACLGN-DGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLS--WCPSRFSPE 181
Query: 226 STIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWS 267
SA + +I+ K+G+ L K+ + S+SW+
Sbjct: 182 KLAVSALEQA--IIYQRGKDGKLHVAAKLPGHKSLIRSISWA 221
Score = 100 (40.3 bits), Expect = 9.2e-36, Sum P(2) = 9.2e-36
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 256 DFKTPVWSVSWSLTGNLLAVA-DANNVTLWKEAVDGEWQQVSVVEPQ 301
D VWSVSW+LTG +L+ A D V LWK E++ +SV+ Q
Sbjct: 302 DHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCMSVITAQ 348
Score = 88 (36.0 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 24/77 (31%), Positives = 35/77 (45%)
Query: 61 VAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGL--- 117
++W +F + S Q II++ G A HKS + SI+WAP +G
Sbjct: 171 LSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAP-SIGRWYQ 229
Query: 118 SLACGSSDGNISVFTAT 134
+A G DG I +F T
Sbjct: 230 LIATGCKDGRIRIFKIT 246
>UNIPROTKB|Q6GNF1 [details] [associations]
symbol:seh1l-b "Nucleoporin seh1-B" species:8355 "Xenopus
laevis" [GO:0006999 "nuclear pore organization" evidence=ISS]
[GO:0007080 "mitotic metaphase plate congression" evidence=ISS]
[GO:0031080 "nuclear pore outer ring" evidence=ISS] [GO:0051315
"attachment of spindle microtubules to kinetochore involved in
mitotic sister chromatid segregation" evidence=ISS] [GO:0000776
"kinetochore" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0015031 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051028 GO:GO:0051315 GO:GO:0000777 GO:GO:0007080
GO:GO:0031080 GO:GO:0006999 EMBL:BC073561 RefSeq:NP_001085936.1
UniGene:Xl.3340 ProteinModelPortal:Q6GNF1 GeneID:444365
KEGG:xla:444365 Uniprot:Q6GNF1
Length = 360
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 82/247 (33%), Positives = 129/247 (52%)
Query: 3 AQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHL-ATLKGHRGPVWQV 61
A+ I H+D +HDV+ DF+G+R+AT SSD S+K+ S + + H A+ K H G VW+V
Sbjct: 4 ARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSENVNWHCTASWKTHSGSVWRV 63
Query: 62 AWAHPKFGSILASCSYDGQVIIWKE--GNQND-------WTQAHTFNDHKSSVNSIAWAP 112
WAHP+FG +LASCS+D +W+E G ND W + T D ++SV + +AP
Sbjct: 64 TWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAP 123
Query: 113 HELGLSLACGSSDGNISVFTATAD---GGWDTTRIDQAHPVGVTSVSWAPAM--APGALV 167
+GL LA S+DG + ++ A W + + + + +SW P+ A ++
Sbjct: 124 KHMGLMLATCSADGVVRIYEAPDVMNLSQWSLQH-EISCKLSCSCISWNPSSSRAHSPMI 182
Query: 168 GLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKST 227
+G D +S V++++ K L SD V +A+APNLG
Sbjct: 183 AVGSDD-----SSPNIMGKVQIYEYNENTRKYAKAETLMSVSDPVHDIAFAPNLGRSFHI 237
Query: 228 IASASQD 234
+A A++D
Sbjct: 238 LAVATKD 244
Score = 175 (66.7 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 60/227 (26%), Positives = 104/227 (45%)
Query: 89 QNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATAD---GGWDTTRID 145
Q+ W + T D ++SV + +AP +GL LA S+DG + ++ A W +
Sbjct: 100 QSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGVVRIYEAPDVMNLSQWSLQH-E 158
Query: 146 QAHPVGVTSVSWAPAM--APGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFP 203
+ + + +SW P+ A ++ +G D +S V++++ K
Sbjct: 159 ISCKLSCSCISWNPSSSRAHSPMIAVGSDD-----SSPNIMGKVQIYEYNENTRKYAKAE 213
Query: 204 ALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV-VIWTCAKE-----G-EQWEGRVLKD 256
L SD V +A+APNLG +A A++D + + KE G ++E +
Sbjct: 214 TLMSVSDPVHDIAFAPNLGRSFHILAVATKDVRIFTMKPLRKELSSSGGVTKFENHTVAQ 273
Query: 257 F---KTPVWSVSWSLTGNLLAVA-DANNVTLWKEAVDGEWQQVSVVE 299
F + VW VSW++TG +LA + D V LWK W+ + V++
Sbjct: 274 FDNHNSQVWRVSWNITGTVLASSGDDGTVRLWKANYMDNWKCIGVLK 320
>UNIPROTKB|Q4FZW5 [details] [associations]
symbol:seh1l-a "Nucleoporin seh1-A" species:8355 "Xenopus
laevis" [GO:0006999 "nuclear pore organization" evidence=ISS]
[GO:0007080 "mitotic metaphase plate congression" evidence=ISS]
[GO:0031080 "nuclear pore outer ring" evidence=ISS] [GO:0051315
"attachment of spindle microtubules to kinetochore involved in
mitotic sister chromatid segregation" evidence=ISS] [GO:0000776
"kinetochore" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0015031 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051028 GO:GO:0051315 GO:GO:0000777 GO:GO:0007080
GO:GO:0031080 GO:GO:0006999 EMBL:BC099027 RefSeq:NP_001089593.1
UniGene:Xl.47439 ProteinModelPortal:Q4FZW5 GeneID:734650
KEGG:xla:734650 CTD:81929 Xenbase:XB-GENE-1015667 KO:K14299
Uniprot:Q4FZW5
Length = 360
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 82/247 (33%), Positives = 129/247 (52%)
Query: 3 AQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHL-ATLKGHRGPVWQV 61
A+ I H+D +HDV+ DF+G+R+AT SSD S+K+ S + + H A+ K H G VW+V
Sbjct: 4 ARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSENGNWHCTASWKTHSGSVWRV 63
Query: 62 AWAHPKFGSILASCSYDGQVIIWKE--GNQND-------WTQAHTFNDHKSSVNSIAWAP 112
WAHP+FG +LASCS+D +W+E G ND W + T D ++SV + +AP
Sbjct: 64 TWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAP 123
Query: 113 HELGLSLACGSSDGNISVFTATAD---GGWDTTRIDQAHPVGVTSVSWAPAM--APGALV 167
+GL LA S+DG + ++ A W + + + + +SW P+ A ++
Sbjct: 124 KHMGLMLATCSADGVVRIYEAPDVMNLSQWSLQH-EISCKLSCSCISWNPSSSRAHSPMI 182
Query: 168 GLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKST 227
+G D +S V++++ K L SD V +A+APNLG
Sbjct: 183 AVGSDD-----SSPNIMGKVQIYEYNENTRKYAKAETLMSVSDPVHDIAFAPNLGRSFHI 237
Query: 228 IASASQD 234
+A A++D
Sbjct: 238 LAVATKD 244
Score = 172 (65.6 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 58/227 (25%), Positives = 101/227 (44%)
Query: 89 QNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATAD---GGWDTTRID 145
Q+ W + T D ++SV + +AP +GL LA S+DG + ++ A W +
Sbjct: 100 QSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGVVRIYEAPDVMNLSQWSLQH-E 158
Query: 146 QAHPVGVTSVSWAPAM--APGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFP 203
+ + + +SW P+ A ++ +G D +S V++++ K
Sbjct: 159 ISCKLSCSCISWNPSSSRAHSPMIAVGSDD-----SSPNIMGKVQIYEYNENTRKYAKAE 213
Query: 204 ALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLK-------- 255
L SD V +A+APNLG +A A++D + ++ G V K
Sbjct: 214 TLMSVSDPVHDIAFAPNLGRSFHILAVATKDVRIFTMKPLRKELSSSGGVTKFEIHTVAQ 273
Query: 256 --DFKTPVWSVSWSLTGNLLAVA-DANNVTLWKEAVDGEWQQVSVVE 299
+ + VW VSW++TG +LA + D V LWK W+ + V++
Sbjct: 274 FDNHNSQVWRVSWNITGTVLASSGDDGTVRLWKANYMDNWKCIGVLK 320
>UNIPROTKB|Q5U4Y8 [details] [associations]
symbol:seh1l "Nucleoporin seh1" species:8364 "Xenopus
(Silurana) tropicalis" [GO:0006999 "nuclear pore organization"
evidence=ISS] [GO:0007080 "mitotic metaphase plate congression"
evidence=ISS] [GO:0031080 "nuclear pore outer ring" evidence=ISS]
[GO:0051315 "attachment of spindle microtubules to kinetochore
involved in mitotic sister chromatid segregation" evidence=ISS]
[GO:0000776 "kinetochore" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0015031 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051028 GO:GO:0051315
GO:GO:0000777 GO:GO:0007080 GO:GO:0031080 GO:GO:0006999 CTD:81929
KO:K14299 GeneTree:ENSGT00550000074999 HOGENOM:HOG000216896
OMA:YEAPDIM OrthoDB:EOG4DJJWR EMBL:CR855721 EMBL:BC084902
RefSeq:NP_001011152.1 UniGene:Str.2999 ProteinModelPortal:Q5U4Y8
STRING:Q5U4Y8 Ensembl:ENSXETT00000055056 GeneID:496570
KEGG:xtr:496570 Xenbase:XB-GENE-1015661 InParanoid:Q5U4Y8
Bgee:Q5U4Y8 Uniprot:Q5U4Y8
Length = 360
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 82/247 (33%), Positives = 128/247 (51%)
Query: 3 AQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHL-ATLKGHRGPVWQV 61
A+ I H+D +HDV+ DF+G+R+AT SSD S+K+ S + H A+ K H G VW+V
Sbjct: 4 ARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSENGDWHCTASWKTHSGSVWRV 63
Query: 62 AWAHPKFGSILASCSYDGQVIIWKE--GNQND-------WTQAHTFNDHKSSVNSIAWAP 112
WAHP+FG +LASCS+D +W+E G ND W + T D ++SV + +AP
Sbjct: 64 TWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAP 123
Query: 113 HELGLSLACGSSDGNISVFTATAD---GGWDTTRIDQAHPVGVTSVSWAPAM--APGALV 167
+GL LA S+DG + ++ A W + + + + +SW P+ A ++
Sbjct: 124 KHMGLMLATCSADGVVRIYEAPDVMNLSQWSLQH-EISCKLSCSCISWNPSSSRAHSPMI 182
Query: 168 GLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKST 227
+G D +S V++++ K L SD V +A+APNLG
Sbjct: 183 AVGSDD-----SSPNIMGKVQIYEYNENTRKYAKAETLMSVSDPVHDIAFAPNLGRSFHI 237
Query: 228 IASASQD 234
+A A++D
Sbjct: 238 LAVATKD 244
Score = 172 (65.6 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 58/227 (25%), Positives = 101/227 (44%)
Query: 89 QNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATAD---GGWDTTRID 145
Q+ W + T D ++SV + +AP +GL LA S+DG + ++ A W +
Sbjct: 100 QSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGVVRIYEAPDVMNLSQWSLQH-E 158
Query: 146 QAHPVGVTSVSWAPAM--APGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFP 203
+ + + +SW P+ A ++ +G D +S V++++ K
Sbjct: 159 ISCKLSCSCISWNPSSSRAHSPMIAVGSDD-----SSPNIMGKVQIYEYNENTRKYAKAE 213
Query: 204 ALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLK-------- 255
L SD V +A+APNLG +A A++D + ++ G V K
Sbjct: 214 TLMSVSDPVHDIAFAPNLGRSFHILAVATKDVRIFTMKPLRKELSSSGGVTKFEIHTVAQ 273
Query: 256 --DFKTPVWSVSWSLTGNLLAVA-DANNVTLWKEAVDGEWQQVSVVE 299
+ + VW VSW++TG +LA + D V LWK W+ + V++
Sbjct: 274 FDNHNSQVWRVSWNITGTVLASSGDDGTVRLWKANYMDNWKCIGVLK 320
>UNIPROTKB|E1BYP7 [details] [associations]
symbol:SEH1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000776 "kinetochore" evidence=IEA] [GO:0006999
"nuclear pore organization" evidence=IEA] [GO:0007080 "mitotic
metaphase plate congression" evidence=IEA] [GO:0051315 "attachment
of spindle microtubules to kinetochore involved in mitotic sister
chromatid segregation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0000776 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051315
GO:GO:0007080 GO:GO:0006999 CTD:81929 KO:K14299
GeneTree:ENSGT00550000074999 OMA:YEAPDIM EMBL:AADN02058864
IPI:IPI00575685 RefSeq:XP_003640847.1 Ensembl:ENSGALT00000022497
GeneID:100859886 KEGG:gga:100859886 Uniprot:E1BYP7
Length = 419
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 81/247 (32%), Positives = 128/247 (51%)
Query: 3 AQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHL-ATLKGHRGPVWQV 61
A+ I H D +HDV+ DF+G+R+AT SSD S+K+ S + H A+ K H G VW+V
Sbjct: 4 ARSIAADHRDLIHDVSFDFHGRRMATCSSDQSVKVWDKSENGDWHCTASWKTHSGSVWRV 63
Query: 62 AWAHPKFGSILASCSYDGQVIIWKE--GNQND-------WTQAHTFNDHKSSVNSIAWAP 112
WAHP+FG +LASCS+D +W+E G ND W + T D ++SV + +AP
Sbjct: 64 TWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAP 123
Query: 113 HELGLSLACGSSDGNISVFTATAD---GGWDTTRIDQAHPVGVTSVSWAPAM--APGALV 167
+GL LA S+DG + ++ A W + + + + +SW P+ A ++
Sbjct: 124 KHMGLMLATCSADGVVRIYEAPDVMNLSQWSLQH-EISCKLSCSCISWNPSSSRAHSPMI 182
Query: 168 GLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKST 227
+G D + + V++++ K AL +D V +A+APNLG
Sbjct: 183 AVGSDDNSPNILA-----KVQIYEYNENTRKYAKAEALMTVTDPVHDIAFAPNLGRSFHI 237
Query: 228 IASASQD 234
+A A++D
Sbjct: 238 LAVATKD 244
Score = 168 (64.2 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 58/227 (25%), Positives = 105/227 (46%)
Query: 89 QNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATAD---GGWDTTRID 145
Q+ W + T D ++SV + +AP +GL LA S+DG + ++ A W +
Sbjct: 100 QSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGVVRIYEAPDVMNLSQWSLQH-E 158
Query: 146 QAHPVGVTSVSWAPAM--APGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFP 203
+ + + +SW P+ A ++ +G D + + V++++ K
Sbjct: 159 ISCKLSCSCISWNPSSSRAHSPMIAVGSDDNSPNILA-----KVQIYEYNENTRKYAKAE 213
Query: 204 ALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV-VIWTCAKE-----G-EQWEGRVLKD 256
AL +D V +A+APNLG +A A++D + + KE G ++E ++
Sbjct: 214 ALMTVTDPVHDIAFAPNLGRSFHILAVATKDVRIFTLKPLRKELTSSGGLTKFEIHIVAQ 273
Query: 257 F---KTPVWSVSWSLTGNLLAVA-DANNVTLWKEAVDGEWQQVSVVE 299
F + VW VSW++TG +LA + D V LWK W+ +++
Sbjct: 274 FDNHNSQVWRVSWNITGTVLASSGDDGCVRLWKANYMDNWKCTGILK 320
>UNIPROTKB|Q96EE3 [details] [associations]
symbol:SEH1L "Nucleoporin SEH1" species:9606 "Homo sapiens"
[GO:0015031 "protein transport" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
[GO:0000777 "condensed chromosome kinetochore" evidence=IEA]
[GO:0006999 "nuclear pore organization" evidence=IMP] [GO:0031080
"nuclear pore outer ring" evidence=NAS;IDA] [GO:0051315 "attachment
of spindle microtubules to kinetochore involved in mitotic sister
chromatid segregation" evidence=IMP] [GO:0007080 "mitotic metaphase
plate congression" evidence=IMP] [GO:0000776 "kinetochore"
evidence=IDA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005635 "nuclear
envelope" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0008645 "hexose transport" evidence=TAS] [GO:0010827
"regulation of glucose transport" evidence=TAS] [GO:0015758
"glucose transport" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0019221 "cytokine-mediated signaling pathway"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0055085 "transmembrane transport" evidence=TAS]
Reactome:REACT_111217 Reactome:REACT_15518 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 Reactome:REACT_116125
Reactome:REACT_6900 Reactome:REACT_115566 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0044281 GO:GO:0015031
GO:GO:0005975 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0019221 GO:GO:0015758 GO:GO:0010827 GO:GO:0055085
GO:GO:0051028 GO:GO:0051315 GO:GO:0000236 GO:GO:0000777
GO:GO:0007080 GO:GO:0031080 GO:GO:0006999 CTD:81929 KO:K14299
HOGENOM:HOG000216896 OMA:YEAPDIM EMBL:AF255625 EMBL:AF431970
EMBL:AF514996 EMBL:AF136976 EMBL:AK056940 EMBL:AK291226
EMBL:BC012430 IPI:IPI00185533 IPI:IPI00220609 RefSeq:NP_001013455.1
RefSeq:NP_112493.2 UniGene:Hs.301048 ProteinModelPortal:Q96EE3
SMR:Q96EE3 IntAct:Q96EE3 STRING:Q96EE3 DMDM:257051064 PaxDb:Q96EE3
PRIDE:Q96EE3 DNASU:81929 Ensembl:ENST00000262124
Ensembl:ENST00000399892 GeneID:81929 KEGG:hsa:81929 UCSC:uc002krq.3
UCSC:uc002krr.3 GeneCards:GC18P012947 HGNC:HGNC:30379 HPA:HPA039964
MIM:609263 neXtProt:NX_Q96EE3 PharmGKB:PA134912135
InParanoid:Q96EE3 OrthoDB:EOG4DJJWR PhylomeDB:Q96EE3 ChiTaRS:SEH1L
GenomeRNAi:81929 NextBio:72265 Bgee:Q96EE3 CleanEx:HS_SEH1L
Genevestigator:Q96EE3 GermOnline:ENSG00000085415 Uniprot:Q96EE3
Length = 360
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 82/247 (33%), Positives = 128/247 (51%)
Query: 3 AQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHL-ATLKGHRGPVWQV 61
A+ I H+D +HDV+ DF+G+R+AT SSD S+K+ S S H A+ K H G VW+V
Sbjct: 4 ARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESGDWHCTASWKTHSGSVWRV 63
Query: 62 AWAHPKFGSILASCSYDGQVIIWKE--GNQND-------WTQAHTFNDHKSSVNSIAWAP 112
WAHP+FG +LASCS+D +W+E G ND W + T D ++SV + +AP
Sbjct: 64 TWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAP 123
Query: 113 HELGLSLACGSSDGNISVFTATAD---GGWDTTRIDQAHPVGVTSVSWAPAM--APGALV 167
+GL LA S+DG + ++ A W + + + + +SW P+ A ++
Sbjct: 124 KHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQH-EISCKLSCSCISWNPSSSRAHSPMI 182
Query: 168 GLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKST 227
+G D +S V++++ K L +D V +A+APNLG
Sbjct: 183 AVGSDD-----SSPNAMAKVQIFEYNENTRKYAKAETLMTVTDPVHDIAFAPNLGRSFHI 237
Query: 228 IASASQD 234
+A A++D
Sbjct: 238 LAIATKD 244
Score = 163 (62.4 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 58/227 (25%), Positives = 104/227 (45%)
Query: 89 QNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATAD---GGWDTTRID 145
Q+ W + T D ++SV + +AP +GL LA S+DG + ++ A W +
Sbjct: 100 QSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQH-E 158
Query: 146 QAHPVGVTSVSWAPAM--APGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFP 203
+ + + +SW P+ A ++ +G D +S V++++ K
Sbjct: 159 ISCKLSCSCISWNPSSSRAHSPMIAVGSDD-----SSPNAMAKVQIFEYNENTRKYAKAE 213
Query: 204 ALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV-VIWTCAKE-----GE-QWEGRVLKD 256
L +D V +A+APNLG +A A++D + + KE G ++E ++
Sbjct: 214 TLMTVTDPVHDIAFAPNLGRSFHILAIATKDVRIFTLKPVRKELTSSGGPTKFEIHIVAQ 273
Query: 257 F---KTPVWSVSWSLTGNLLAVA-DANNVTLWKEAVDGEWQQVSVVE 299
F + VW VSW++TG +LA + D V LWK W+ +++
Sbjct: 274 FDNHNSQVWRVSWNITGTVLASSGDDGCVRLWKANYMDNWKCTGILK 320
>UNIPROTKB|Q5RAN6 [details] [associations]
symbol:SEH1L "Nucleoporin SEH1" species:9601 "Pongo abelii"
[GO:0006999 "nuclear pore organization" evidence=ISS] [GO:0007080
"mitotic metaphase plate congression" evidence=ISS] [GO:0031080
"nuclear pore outer ring" evidence=ISS] [GO:0051315 "attachment of
spindle microtubules to kinetochore involved in mitotic sister
chromatid segregation" evidence=ISS] [GO:0000776 "kinetochore"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0015031 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051028 GO:GO:0051315 GO:GO:0000777 GO:GO:0007080
GO:GO:0031080 GO:GO:0006999 CTD:81929 KO:K14299
HOGENOM:HOG000216896 EMBL:CR858979 RefSeq:NP_001125688.1
UniGene:Pab.10091 ProteinModelPortal:Q5RAN6 PRIDE:Q5RAN6
GeneID:100172610 KEGG:pon:100172610 InParanoid:Q5RAN6
Uniprot:Q5RAN6
Length = 360
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 82/247 (33%), Positives = 128/247 (51%)
Query: 3 AQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHL-ATLKGHRGPVWQV 61
A+ I H+D +HDV+ DF+G+R+AT SSD S+K+ S S H A+ K H G VW+V
Sbjct: 4 ARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESGDWHCTASWKTHSGSVWRV 63
Query: 62 AWAHPKFGSILASCSYDGQVIIWKE--GNQND-------WTQAHTFNDHKSSVNSIAWAP 112
WAHP+FG +LASCS+D +W+E G ND W + T D ++SV + +AP
Sbjct: 64 TWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAP 123
Query: 113 HELGLSLACGSSDGNISVFTATAD---GGWDTTRIDQAHPVGVTSVSWAPAM--APGALV 167
+GL LA S+DG + ++ A W + + + + +SW P+ A ++
Sbjct: 124 KHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQH-EISCKLSCSCISWNPSSSRAHSPMI 182
Query: 168 GLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKST 227
+G D +S V++++ K L +D V +A+APNLG
Sbjct: 183 AVGSDD-----SSPNAMAKVQIFEYNENTRKYAKAETLMTVTDPVHDIAFAPNLGRSFHI 237
Query: 228 IASASQD 234
+A A++D
Sbjct: 238 LAIATKD 244
Score = 162 (62.1 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 58/227 (25%), Positives = 104/227 (45%)
Query: 89 QNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATAD---GGWDTTRID 145
Q+ W + T D ++SV + +AP +GL LA S+DG + ++ A W +
Sbjct: 100 QSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQH-E 158
Query: 146 QAHPVGVTSVSWAPAM--APGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFP 203
+ + + +SW P+ A ++ +G D +S V++++ K
Sbjct: 159 ISCKLSCSCISWNPSSSRAHSPMIAVGSDD-----SSPNAMAKVQIFEYNENTRKYAKAE 213
Query: 204 ALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV-VIWTCAKE-----GE-QWEGRVLKD 256
L +D V +A+APNLG +A A++D + + KE G ++E ++
Sbjct: 214 TLMTVTDPVHDIAFAPNLGRSFHILAIATKDVRIFTLKPVRKELTSSGGPTKFEIHIVAH 273
Query: 257 F---KTPVWSVSWSLTGNLLAVA-DANNVTLWKEAVDGEWQQVSVVE 299
F + VW VSW++TG +LA + D V LWK W+ +++
Sbjct: 274 FDNHNSQVWRVSWNITGTVLASSGDDGCVRLWKANYMDNWKCTGILK 320
>UNIPROTKB|A7YY75 [details] [associations]
symbol:SEH1L "Nucleoporin SEH1" species:9913 "Bos taurus"
[GO:0000776 "kinetochore" evidence=ISS] [GO:0007080 "mitotic
metaphase plate congression" evidence=ISS] [GO:0051315 "attachment
of spindle microtubules to kinetochore involved in mitotic sister
chromatid segregation" evidence=ISS] [GO:0031080 "nuclear pore
outer ring" evidence=ISS] [GO:0006999 "nuclear pore organization"
evidence=ISS] [GO:0000777 "condensed chromosome kinetochore"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0051028
"mRNA transport" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0015031 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051028 GO:GO:0051315 GO:GO:0000777 GO:GO:0007080
GO:GO:0031080 GO:GO:0006999 CTD:81929 KO:K14299 EMBL:BC151606
IPI:IPI00839665 RefSeq:NP_001096559.1 UniGene:Bt.103393
ProteinModelPortal:A7YY75 STRING:A7YY75 Ensembl:ENSBTAT00000049050
GeneID:506509 KEGG:bta:506509 eggNOG:NOG257251
GeneTree:ENSGT00550000074999 HOGENOM:HOG000216896 OMA:YEAPDIM
NextBio:20867635 ArrayExpress:A7YY75 Uniprot:A7YY75
Length = 360
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 82/247 (33%), Positives = 128/247 (51%)
Query: 3 AQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHL-ATLKGHRGPVWQV 61
A+ I H+D +HDV+ DF+G+R+AT SSD S+K+ S S H A+ K H G VW+V
Sbjct: 4 ARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESGEWHCTASWKTHSGSVWRV 63
Query: 62 AWAHPKFGSILASCSYDGQVIIWKE--GNQND-------WTQAHTFNDHKSSVNSIAWAP 112
WAHP+FG +LASCS+D +W+E G ND W + T D ++SV + +AP
Sbjct: 64 TWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAP 123
Query: 113 HELGLSLACGSSDGNISVFTATAD---GGWDTTRIDQAHPVGVTSVSWAPAM--APGALV 167
+GL LA S+DG + ++ A W + + + + +SW P+ A ++
Sbjct: 124 KHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQH-EISCKLSCSCISWNPSSSRAHAPMI 182
Query: 168 GLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKST 227
+G D +S V++++ K L +D V +A+APNLG
Sbjct: 183 AVGSDD-----SSPNAMAKVQIFEYNENTRKYAKAETLLTVTDPVHDIAFAPNLGRSFHI 237
Query: 228 IASASQD 234
+A A++D
Sbjct: 238 LAIATKD 244
Score = 161 (61.7 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 58/227 (25%), Positives = 104/227 (45%)
Query: 89 QNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATAD---GGWDTTRID 145
Q+ W + T D ++SV + +AP +GL LA S+DG + ++ A W +
Sbjct: 100 QSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQH-E 158
Query: 146 QAHPVGVTSVSWAPAM--APGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFP 203
+ + + +SW P+ A ++ +G D +S V++++ K
Sbjct: 159 ISCKLSCSCISWNPSSSRAHAPMIAVGSDD-----SSPNAMAKVQIFEYNENTRKYAKAE 213
Query: 204 ALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV-VIWTCAKE-----GE-QWEGRVLKD 256
L +D V +A+APNLG +A A++D + + KE G ++E ++
Sbjct: 214 TLLTVTDPVHDIAFAPNLGRSFHILAIATKDVRIFTLKPVRKELTSSGGPTKFEIHIVAQ 273
Query: 257 F---KTPVWSVSWSLTGNLLAVA-DANNVTLWKEAVDGEWQQVSVVE 299
F + VW VSW++TG +LA + D V LWK W+ +++
Sbjct: 274 FDNHNSQVWRVSWNITGTVLASSGDDGCVRLWKANYMDNWKCTGILK 320
>MGI|MGI:1919374 [details] [associations]
symbol:Seh1l "SEH1-like (S. cerevisiae" species:10090 "Mus
musculus" [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006999 "nuclear pore organization" evidence=ISO] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007059 "chromosome segregation"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0007080
"mitotic metaphase plate congression" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0031080 "nuclear pore outer
ring" evidence=ISO] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0051315 "attachment
of spindle microtubules to kinetochore involved in mitotic sister
chromatid segregation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1919374 GO:GO:0051301
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 EMBL:CH466528
GO:GO:0015031 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051028 GO:GO:0051315 GO:GO:0000777 GO:GO:0007080
GO:GO:0031080 GO:GO:0006999 CTD:81929 KO:K14299
GeneTree:ENSGT00550000074999 HOGENOM:HOG000216896 OMA:YEAPDIM
OrthoDB:EOG4DJJWR ChiTaRS:SEH1L EMBL:AK011330 EMBL:AK088835
EMBL:AK143727 EMBL:AK166573 EMBL:AK169231 EMBL:AK169388
EMBL:AK170591 EMBL:BC027244 IPI:IPI00315517 IPI:IPI00406514
RefSeq:NP_001034177.1 RefSeq:NP_082388.1 UniGene:Mm.307315
ProteinModelPortal:Q8R2U0 SMR:Q8R2U0 STRING:Q8R2U0
PhosphoSite:Q8R2U0 PaxDb:Q8R2U0 PRIDE:Q8R2U0
Ensembl:ENSMUST00000025421 GeneID:72124 KEGG:mmu:72124
UCSC:uc008fmx.1 UCSC:uc008fmy.1 InParanoid:Q3UP79 NextBio:335500
Bgee:Q8R2U0 Genevestigator:Q8R2U0 Uniprot:Q8R2U0
Length = 360
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 86/251 (34%), Positives = 129/251 (51%)
Query: 3 AQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHL-ATLKGHRGPVWQV 61
A+ I H+D +HDV+ DF+G+R+AT SSD S+K+ S S H A+ K H G VW+V
Sbjct: 4 ARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESGDWHCTASWKTHSGSVWRV 63
Query: 62 AWAHPKFGSILASCSYDGQVIIWKE--GNQND-------WTQAHTFNDHKSSVNSIAWAP 112
WAHP+FG +LASCS+D +W+E G ND W + T D ++SV + +AP
Sbjct: 64 TWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAP 123
Query: 113 HELGLSLACGSSDGNISVFTATADGGWDTTRIDQ---AHPVGV----TSVSWAPAM--AP 163
+GL LA S+DG + V+ A D + Q H V + +SW P+ A
Sbjct: 124 KHMGLMLATCSADGIVRVYEAP-----DVMNLSQWSLQHEVSCKLCCSCISWNPSSSRAH 178
Query: 164 GALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGL 223
++ +G D +S V++++ K L +D V +A+APNLG
Sbjct: 179 PPMIAVGSDD-----SSPNSMAKVQIFEYNENTRKYAKAETLMTVTDPVHDIAFAPNLGR 233
Query: 224 PKSTIASASQD 234
+A A++D
Sbjct: 234 SFHILAVATKD 244
Score = 161 (61.7 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 62/231 (26%), Positives = 105/231 (45%)
Query: 89 QNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQ-- 146
Q+ W + T D ++SV + +AP +GL LA S+DG + V+ A D + Q
Sbjct: 100 QSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRVYEAP-----DVMNLSQWS 154
Query: 147 -AHPVGV----TSVSWAPAM--APGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKM 199
H V + +SW P+ A ++ +G D +S V++++ K
Sbjct: 155 LQHEVSCKLCCSCISWNPSSSRAHPPMIAVGSDD-----SSPNSMAKVQIFEYNENTRKY 209
Query: 200 DCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV-VIWTCAKE-----GE-QWEGR 252
L +D V +A+APNLG +A A++D + + KE G ++E
Sbjct: 210 AKAETLMTVTDPVHDIAFAPNLGRSFHILAVATKDVRIFTLKPLRKELTSSGGPTKFEIH 269
Query: 253 VLKDF---KTPVWSVSWSLTGNLLAVA-DANNVTLWKEAVDGEWQQVSVVE 299
++ F + VW VSW++TG +LA + D V LWK W+ +++
Sbjct: 270 IVAQFDNHNSQVWRVSWNITGTVLASSGDDGCVRLWKANYMDNWKCTGILK 320
>POMBASE|SPAC15F9.02 [details] [associations]
symbol:seh1 "nucleoporin Seh1" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005643
"nuclear pore" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006407 "rRNA export from nucleus" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0031080 "nuclear pore outer
ring" evidence=IDA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0031965 "nuclear membrane" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPAC15F9.02 GO:GO:0005829
EMBL:CU329670 GenomeReviews:CU329670_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0015031 eggNOG:COG2319
GO:GO:0051028 GO:GO:0031080 GO:GO:0006407 KO:K14299
HOGENOM:HOG000216896 OMA:YEAPDIM PIR:T37727 RefSeq:NP_593751.1
ProteinModelPortal:Q10099 IntAct:Q10099 STRING:Q10099
EnsemblFungi:SPAC15F9.02.1 GeneID:2541682 KEGG:spo:SPAC15F9.02
OrthoDB:EOG418FX3 NextBio:20802775 Uniprot:Q10099
Length = 339
Score = 290 (107.1 bits), Expect = 4.2e-30, Sum P(2) = 4.2e-30
Identities = 73/245 (29%), Positives = 120/245 (48%)
Query: 3 AQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGP--VWQ 60
A I+T H+D V+DV DFYG+R+ + S+D +K+ ++ T + G + +
Sbjct: 6 ATTIQTNHQDLVNDVTYDFYGRRMVSCSADQRVKVYDFNDDTETWAITSEWRAGDASLMR 65
Query: 61 VAWAHPKFGSILASCSYDGQVIIWKEGNQN----DWTQAHTFNDHKSSVNSIAWAPHELG 116
VAWAHP FG +LA CS D V I++E +N W + D +S+V I++ P + G
Sbjct: 66 VAWAHPSFGQVLAVCSLDRGVRIYEEQKKNFESKTWVEVAKLMDARSAVLDISFCPFQHG 125
Query: 117 LSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQ 176
LA S+D + ++ A G + T + + + + P V +
Sbjct: 126 CKLAAVSADATLRIYEAMEPG--NLTYWTLMNEIALMPSPPSRNEQPAFCVNWCPSRWRE 183
Query: 177 KLASCGCDNTVKVWKMYN-GIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDG 235
+ + GC N ++K + G WK L H+D +R + WAP++G IA+A +DG
Sbjct: 184 QYIAVGCMNDAYIYKQNSHGKWKK--VAELPGHTDLIRDICWAPSMGSSYYLIATACKDG 241
Query: 236 TVVIW 240
V I+
Sbjct: 242 NVRIF 246
Score = 58 (25.5 bits), Expect = 4.2e-30, Sum P(2) = 4.2e-30
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 258 KTPVWSVSWSLTGNLLAVA-DANNVTLWKEAVDGEWQQVSVV 298
K VW +++TG +L+ + D V LWK + ++ +SVV
Sbjct: 289 KCQVWRCRFNVTGTILSSSGDDGCVRLWKASYANLFKCISVV 330
Score = 38 (18.4 bits), Expect = 5.2e-28, Sum P(2) = 5.2e-28
Identities = 6/24 (25%), Positives = 12/24 (50%)
Query: 217 WAPNLGLPKSTIASASQDGTVVIW 240
W + + ++S+ DG V +W
Sbjct: 293 WRCRFNVTGTILSSSGDDGCVRLW 316
>UNIPROTKB|B3GEK9 [details] [associations]
symbol:npp-20 "Nuclear pore complex protein 20"
species:135651 "Caenorhabditis brenneri" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0005643 "nuclear pore" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319 GO:GO:0005643
GO:GO:0000910 EMBL:EU692928 ProteinModelPortal:B3GEK9 STRING:B3GEK9
Uniprot:B3GEK9
Length = 209
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 68/205 (33%), Positives = 116/205 (56%)
Query: 94 QAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTA-TADGGWDTTRIDQAHPVGV 152
+++ + H++S +A+APH+ GL LA S+DG+I + T G W +++I + H GV
Sbjct: 2 KSYEWEAHEASTTCVAFAPHQYGLMLASSSADGDIGILRYDTVTGQWQSSKIQKCHEQGV 61
Query: 153 TSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWV 212
SVSWAP A L ++L S G DN VK+W + + + C L H+D+V
Sbjct: 62 NSVSWAPGTAD--------LSAKKRLVSAGNDNKVKIWLLNDTTNEWTCEKVLSGHTDYV 113
Query: 213 RSVAWAPNLGLPKSTIASASQDGTVVIWTCAK-EGEQWEGRVLKDFKTPVWSVSWSLTGN 271
R +W P + +I S DG +V++ A E ++W+ ++L+ P++ S+S G+
Sbjct: 114 REASWCPVTNKGQHSIVSCGIDGNLVLFRTANIETDEWKSKLLEKAPCPLYHASFSPCGS 173
Query: 272 LLAVA-DANNVTLWKEAVDGEWQQV 295
L+V+ D N +T+W+E + G+W +V
Sbjct: 174 FLSVSGDDNMITIWRENLQGQWIKV 198
Score = 123 (48.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 48/207 (23%), Positives = 81/207 (39%)
Query: 52 KGHRGPVWQVAWAHPKFGSILASCSYDGQV-IIWKEGNQNDWTQAHTFNDHKSSVNSIAW 110
+ H VA+A ++G +LAS S DG + I+ + W + H+ VNS++W
Sbjct: 7 EAHEASTTCVAFAPHQYGLMLASSSADGDIGILRYDTVTGQWQSSKIQKCHEQGVNSVSW 66
Query: 111 APHELGLS----LACGSSDGNISVFTAT-ADGGWDTTRIDQAHPVGVTSVSWAPAMAPGA 165
AP LS L +D + ++ W ++ H V SW P G
Sbjct: 67 APGTADLSAKKRLVSAGNDNKVKIWLLNDTTNEWTCEKVLSGHTDYVREASWCPVTNKGQ 126
Query: 166 LVGLGLLDPVQKLASCGCDNTVKVWKMYN---GIWKMDCFPALQMHSDWVRSVAWAPNLG 222
+ SCG D + +++ N WK L+ + +++P G
Sbjct: 127 ----------HSIVSCGIDGNLVLFRTANIETDEWKSKL---LEKAPCPLYHASFSP-CG 172
Query: 223 LPKSTIASASQDGTVVIWTCAKEGEQW 249
S ++ + D + IW +G QW
Sbjct: 173 ---SFLSVSGDDNMITIWRENLQG-QW 195
Score = 114 (45.2 bits), Expect = 0.00015, P = 0.00015
Identities = 50/190 (26%), Positives = 80/190 (42%)
Query: 22 YGKRLATASSDSSIKIIGLSNSASQHLATL--KGHRGPVWQVAWAHPKFGSI-----LAS 74
YG LA++S+D I I+ Q ++ K H V V+WA P + L S
Sbjct: 23 YGLMLASSSADGDIGILRYDTVTGQWQSSKIQKCHEQGVNSVSWA-PGTADLSAKKRLVS 81
Query: 75 CSYDGQVIIWK-EGNQNDWTQAHTFNDHKSSVNSIAWAP-HELGLS--LACGSSDGNISV 130
D +V IW N+WT + H V +W P G ++CG DGN+ +
Sbjct: 82 AGNDNKVKIWLLNDTTNEWTCEKVLSGHTDYVREASWCPVTNKGQHSIVSCGI-DGNLVL 140
Query: 131 F-TATADGG-WDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVK 188
F TA + W + +++A P + S++P G+ + + G DN +
Sbjct: 141 FRTANIETDEWKSKLLEKA-PCPLYHASFSPC---GSFLSVS-----------GDDNMIT 185
Query: 189 VWKM-YNGIW 197
+W+ G W
Sbjct: 186 IWRENLQGQW 195
>UNIPROTKB|C1BK83 [details] [associations]
symbol:seh1l "Nucleoporin seh1" species:8014 "Osmerus
mordax" [GO:0006999 "nuclear pore organization" evidence=ISS]
[GO:0007080 "mitotic metaphase plate congression" evidence=ISS]
[GO:0031080 "nuclear pore outer ring" evidence=ISS] [GO:0051315
"attachment of spindle microtubules to kinetochore involved in
mitotic sister chromatid segregation" evidence=ISS] [GO:0000776
"kinetochore" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0015031 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051028 GO:GO:0051315 GO:GO:0000777 GO:GO:0007080
GO:GO:0031080 GO:GO:0006999 EMBL:BT075012 ProteinModelPortal:C1BK83
Uniprot:C1BK83
Length = 364
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 78/247 (31%), Positives = 128/247 (51%)
Query: 3 AQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHL-ATLKGHRGPVWQV 61
A+ I H+D +HDV+ DF+G+R+AT SSD S+K+ S++ + A+ K H G VW+V
Sbjct: 4 ARSIAADHKDLIHDVSYDFHGRRMATCSSDQSVKVWDKSDNGEWNCTASWKTHSGSVWRV 63
Query: 62 AWAHPKFGSILASCSYDGQVIIWKE--GNQND-------WTQAHTFNDHKSSVNSIAWAP 112
WAHP+FG +LASCS+D +W+E G ND W + T D ++SV + +AP
Sbjct: 64 TWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKQRGLSHWIKRTTLVDSRTSVTDVKFAP 123
Query: 113 HELGLSLACGSSDGNISVFTATAD---GGWDTTRIDQAHPVGVTSVSWAPAM--APGALV 167
+GL L S+DG + ++ A W + + + + +SW P+ A ++
Sbjct: 124 KHMGLMLTTCSADGVVRIYEAPDVMNLSQWSLQH-EISCKLSCSCISWNPSSSRAHSPMI 182
Query: 168 GLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKST 227
+G D ++ V++++ K L +D V +A+APNLG
Sbjct: 183 AVGSDD-----SNTAYSGKVQIYEYVENTRKYAKVETLMTVTDPVHDIAFAPNLGRSFHV 237
Query: 228 IASASQD 234
+A A++D
Sbjct: 238 LAIATKD 244
Score = 155 (59.6 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 55/229 (24%), Positives = 100/229 (43%)
Query: 85 KEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATAD---GGWDT 141
K+ + W + T D ++SV + +AP +GL L S+DG + ++ A W
Sbjct: 96 KQRGLSHWIKRTTLVDSRTSVTDVKFAPKHMGLMLTTCSADGVVRIYEAPDVMNLSQWSL 155
Query: 142 TRIDQAHPVGVTSVSWAPAM--APGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKM 199
+ + + + +SW P+ A ++ +G D ++ V++++ K
Sbjct: 156 QH-EISCKLSCSCISWNPSSSRAHSPMIAVGSDD-----SNTAYSGKVQIYEYVENTRKY 209
Query: 200 DCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVV-IWTCAKEGE-----QWEGRV 253
L +D V +A+APNLG +A A++D + + KE + E ++
Sbjct: 210 AKVETLMTVTDPVHDIAFAPNLGRSFHVLAIATKDVRIFKLIPMRKESSSSGPTKLEVQL 269
Query: 254 LKDF---KTPVWSVSWSLTGNLLAVA-DANNVTLWKEAVDGEWQQVSVV 298
F + VW VSW++T LLA + D V LWK W+ ++
Sbjct: 270 QAQFDGHNSQVWRVSWNITSTLLASSGDDGCVRLWKANYMDNWKCTGIL 318
>FB|FBgn0033247 [details] [associations]
symbol:Nup44A "Nucleoporin at 44A" species:7227 "Drosophila
melanogaster" [GO:0005643 "nuclear pore" evidence=ISS] [GO:0017056
"structural constituent of nuclear pore" evidence=ISS] [GO:0007184
"SMAD protein import into nucleus" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0051445 "regulation of meiotic cell
cycle" evidence=IMP] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IMP] [GO:0043234 "protein complex" evidence=IPI]
[GO:0005635 "nuclear envelope" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE013599 GO:GO:0007346
GO:GO:0005635 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048477
GO:GO:0051445 KO:K14299 GeneTree:ENSGT00550000074999 OMA:YEAPDIM
EMBL:AY060480 RefSeq:NP_610343.1 RefSeq:NP_724637.1
RefSeq:NP_724638.1 UniGene:Dm.3965 SMR:Q7K2X8 IntAct:Q7K2X8
STRING:Q7K2X8 EnsemblMetazoa:FBtr0088860 EnsemblMetazoa:FBtr0088861
EnsemblMetazoa:FBtr0088862 GeneID:35762 KEGG:dme:Dmel_CG8722
UCSC:CG8722-RA CTD:35762 FlyBase:FBgn0033247 InParanoid:Q7K2X8
OrthoDB:EOG42V6XT GenomeRNAi:35762 NextBio:795094 Uniprot:Q7K2X8
Length = 354
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 93/321 (28%), Positives = 155/321 (48%)
Query: 4 QKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHL-ATLKGHRGPVWQVA 62
+ I H+D +HDV D+YG+R+AT SSD ++KI ++ ++ K H G +W+V+
Sbjct: 5 EPIIADHKDVIHDVVFDYYGRRMATCSSDQTVKIWDEDGQGKWNVTSSWKAHSGSIWRVS 64
Query: 63 WAHPKFGSILASCSYDGQVIIWKE------GNQND----WTQAHTFNDHKSSVNSIAWAP 112
WAHP+FG ++A+CS+D +W+E + N W + T D ++SV + +AP
Sbjct: 65 WAHPEFGQVVATCSFDRTASVWEEVIGEKVSSTNTPTRRWVRRTTLVDSRTSVTDVEFAP 124
Query: 113 HELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLL 172
LGL LA S+DG I ++ A D + Q PV + P +
Sbjct: 125 KYLGLLLATASADGIIRIYEAP-----DIMNLSQ-WPVQHEISNKLPLSCLSWNTSTYM- 177
Query: 173 DPVQKLASCGCDN----TVKVWKMYNGIWKMDCFPALQMH--SDWVRSVAWAPNLGLPKS 226
V +L + G D T KV+ C ++ +D V VA+APN G
Sbjct: 178 --VTQLLAAGSDEAATPTGKVFLFAYSENSRKCVKIDTVNDITDPVTDVAFAPNAGRTFH 235
Query: 227 TIASASQDGTVVIW---TCAKEGEQWEGRVLK--DFKTPVWSVSWSLTGNLL-AVADANN 280
+A AS+D +V T A + + + + +K + PVW V W++ +L + D
Sbjct: 236 MLAVASKDLYIVNLRGVTDATDISKLDIQTIKFSEHNCPVWRVCWNMLATMLISTGDDGC 295
Query: 281 VTLWKEAVDGEWQQVSVVEPQ 301
V LW+ + +W+ +V++ +
Sbjct: 296 VRLWRMNYNRQWRCAAVLKAE 316
>ZFIN|ZDB-GENE-030131-6689 [details] [associations]
symbol:seh1l "SEH1-like (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0006999 "nuclear pore organization" evidence=ISS]
[GO:0051315 "attachment of spindle microtubules to kinetochore
involved in mitotic sister chromatid segregation" evidence=ISS]
[GO:0000776 "kinetochore" evidence=IEA;ISS] [GO:0007080 "mitotic
metaphase plate congression" evidence=ISS] [GO:0031080 "nuclear
pore outer ring" evidence=ISS] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0000775 "chromosome, centromeric region" evidence=IEA]
[GO:0007059 "chromosome segregation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000777 "condensed chromosome kinetochore" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-030131-6689 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0015031 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0051028 GO:GO:0051315 GO:GO:0000777
GO:GO:0007080 GO:GO:0031080 GO:GO:0006999 EMBL:BX294130 CTD:81929
KO:K14299 eggNOG:NOG257251 GeneTree:ENSGT00550000074999
HOGENOM:HOG000216896 EMBL:AY398414 IPI:IPI00499010
RefSeq:NP_956217.2 UniGene:Dr.20191 ProteinModelPortal:Q6TGU2
STRING:Q6TGU2 Ensembl:ENSDART00000013865 GeneID:334749
KEGG:dre:334749 InParanoid:Q6TGU2 NextBio:20810534
ArrayExpress:Q6TGU2 Bgee:Q6TGU2 Uniprot:Q6TGU2
Length = 364
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 78/247 (31%), Positives = 125/247 (50%)
Query: 3 AQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHL-ATLKGHRGPVWQV 61
A+ I H+D +HDV+ DF+G+R+AT SSD S+K+ + H A+ K H G VW+V
Sbjct: 4 AKSIAADHKDLIHDVSYDFHGRRMATCSSDQSVKVWDKGDDGEWHCTASWKTHSGSVWRV 63
Query: 62 AWAHPKFGSILASCSYDGQVIIWKE--GNQND-------WTQAHTFNDHKSSVNSIAWAP 112
WAHP+FG +LASCS+D +W+E G ND W + T D ++SV + +AP
Sbjct: 64 TWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKQRGQSHWIKRTTLVDSRTSVTDVKFAP 123
Query: 113 HELGLSLACGSSDGNISVFTATAD---GGWDTTRIDQAHPVGVTSVSWAPAM--APGALV 167
+GL L S+DG + ++ A W + + + + +SW P+ A ++
Sbjct: 124 KHMGLMLTTCSADGVVRIYEAPDVMNLSQWSLQH-EISCKLACSCISWNPSSSRAHPPMI 182
Query: 168 GLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKST 227
+G D ++ V++ + K L +D V +A+APNLG
Sbjct: 183 AVGGDD-----SNGAYSGKVQIHEYNENTRKYAKAETLMTVTDPVHDIAFAPNLGRSFHV 237
Query: 228 IASASQD 234
+A A++D
Sbjct: 238 LAIATKD 244
Score = 155 (59.6 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 56/230 (24%), Positives = 102/230 (44%)
Query: 85 KEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATAD---GGWDT 141
K+ Q+ W + T D ++SV + +AP +GL L S+DG + ++ A W
Sbjct: 96 KQRGQSHWIKRTTLVDSRTSVTDVKFAPKHMGLMLTTCSADGVVRIYEAPDVMNLSQWSL 155
Query: 142 TRIDQAHPVGVTSVSWAPAM--APGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKM 199
+ + + + +SW P+ A ++ +G D ++ V++ + K
Sbjct: 156 QH-EISCKLACSCISWNPSSSRAHPPMIAVGGDD-----SNGAYSGKVQIHEYNENTRKY 209
Query: 200 DCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVV-IWTCAKEGE------QWEGR 252
L +D V +A+APNLG +A A++D + + +E ++E +
Sbjct: 210 AKAETLMTVTDPVHDIAFAPNLGRSFHVLAIATKDVRIFKLLPLRRESANSSGPTKFEVQ 269
Query: 253 VLKDF---KTPVWSVSWSLTGNLLAVA-DANNVTLWKEAVDGEWQQVSVV 298
V+ F + VW VSW++T LLA + D V LWK W+ ++
Sbjct: 270 VMAQFDSHNSQVWRVSWNITSTLLASSGDDGCVRLWKANYMDNWKCTGIL 319
>WB|WBGene00003804 [details] [associations]
symbol:npp-18 species:6239 "Caenorhabditis elegans"
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0015031
eggNOG:COG2319 GO:GO:0005643 GO:GO:0045132 GO:GO:0051028 KO:K14299
GeneTree:ENSGT00550000074999 HOGENOM:HOG000216896 OMA:YEAPDIM
EMBL:AL021481 PIR:T26842 RefSeq:NP_499740.1
ProteinModelPortal:O45933 SMR:O45933 STRING:O45933 PaxDb:O45933
EnsemblMetazoa:Y43F4B.4.1 EnsemblMetazoa:Y43F4B.4.2 GeneID:176748
KEGG:cel:CELE_Y43F4B.4 UCSC:Y43F4B.4 CTD:176748 WormBase:Y43F4B.4
InParanoid:O45933 NextBio:893842 Uniprot:O45933
Length = 363
Score = 237 (88.5 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 56/183 (30%), Positives = 93/183 (50%)
Query: 2 PAQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSAS-QHLATLKGHRGPVWQ 60
P Q + H D +H V+ D +G+R+AT +SD ++ I + + A K H G VW+
Sbjct: 9 PFQTVGA-HRDLIHCVSFDPHGRRMATCASDMTMAIWDRKPDGNWRRSAHWKCHGGAVWR 67
Query: 61 VAWAHPKFGSILASCSYDGQVIIWKEG----------NQNDWTQAHTFNDHKSSVNSIAW 110
V WAHP+FG I+A+CSYD ++IW+E ++ W + +D++S V I +
Sbjct: 68 VIWAHPEFGQIVATCSYDRTIVIWEEQIVRSEKDLKQKESQWIRRTIISDNRSDVTDICF 127
Query: 111 APHELGLSLACGSSDGNISVFTAT--ADGG-WDTTRIDQAHPVGVTSVSWAPAMAPGALV 167
+P LGL +A + G + ++ A D W+ QA V+W+ + L+
Sbjct: 128 SPRHLGLMMASCNVLGTVRIYEAPDIVDASRWNLIHELQAFHTRCGCVTWSLSRMHRPLI 187
Query: 168 GLG 170
+G
Sbjct: 188 AVG 190
Score = 49 (22.3 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 216 AWAPNLGLPKSTIASASQDGTVVIW 240
AW L S I+S S DGT+ W
Sbjct: 292 AWRLRYNLMGSVISSTSLDGTLRSW 316
>UNIPROTKB|Q17GR9 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7159 "Aedes aegypti" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:CH477256
RefSeq:XP_001662680.1 UniGene:Aae.8569 ProteinModelPortal:Q17GR9
STRING:Q17GR9 EnsemblMetazoa:AAEL002912-RA GeneID:5576487
KEGG:aag:AaeL_AAEL002912 VectorBase:AAEL002912 HOGENOM:HOG000208901
OMA:SWKCVCT OrthoDB:EOG45DV4X PhylomeDB:Q17GR9 Uniprot:Q17GR9
Length = 337
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 92/301 (30%), Positives = 135/301 (44%)
Query: 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAH 65
+ GH T+ DVA G+ LA+AS D+++ I + + ATL+GH V V+W+
Sbjct: 55 LSDGHSRTIRDVAWSPCGQYLASASFDATVAIWDKKSGEFECNATLEGHENEVKSVSWS- 113
Query: 66 PKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD 125
K GS+LA+CS D V +W+ ++++ A N H V + W PHE LA S D
Sbjct: 114 -KSGSLLATCSRDKSVWVWEVAQEDEYECAAVLNTHTQDVKKVEWHPHED--ILASASYD 170
Query: 126 GNISVFTAT-ADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCD 184
I ++ AD W + +H V S+S+ G G +LASC D
Sbjct: 171 NTIKLYKEDLADSDWSSFDTLVSHESTVWSISFD---------GSG-----NRLASCSDD 216
Query: 185 NTVKVWKMYN-G------------IWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASA 231
TVK+W+ Y G +WK C A HS V ++W GL +A+A
Sbjct: 217 QTVKIWQEYKPGNEFGVSCPDNTPVWKCVCTLA-GYHSRSVYDISWCKQSGL----LATA 271
Query: 232 SQDGTVVIWTCAKEGEQWEGRV-LKDFK----TPVWSVSWSLT--GNLLAVADANNVTLW 284
D V I+ + E + K V +V W+ T G L+ +D +V LW
Sbjct: 272 CGDDMVRIFKEVEGSSPHEPTFEMVGSKHAHSQDVNTVEWNPTVVGLLVTTSDDGDVKLW 331
Query: 285 K 285
K
Sbjct: 332 K 332
Score = 197 (74.4 bits), Expect = 6.9e-14, P = 6.9e-14
Identities = 86/305 (28%), Positives = 128/305 (41%)
Query: 8 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLA--TL--KGHRGPVWQVAW 63
TGH G LAT D +I+I + ASQ T+ GH + VAW
Sbjct: 11 TGHRGRAWGAGWHPKGNVLATCGEDKTIRI--WAEDASQRWVAKTVLSDGHSRTIRDVAW 68
Query: 64 AHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGS 123
+ P G LAS S+D V IW + ++ T H++ V S++W+ + G LA S
Sbjct: 69 S-P-CGQYLASASFDATVAIWDK-KSGEFECNATLEGHENEVKSVSWS--KSGSLLATCS 123
Query: 124 SDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGC 183
D ++ V+ + ++ + H V V W P + + LAS
Sbjct: 124 RDKSVWVWEVAQEDEYECAAVLNTHTQDVKKVEWHPH------------EDI--LASASY 169
Query: 184 DNTVKVWK--MYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWT 241
DNT+K++K + + W F L H S W+ + + +AS S D TV IW
Sbjct: 170 DNTIKLYKEDLADSDWSS--FDTLVSHE----STVWSISFDGSGNRLASCSDDQTVKIWQ 223
Query: 242 CAKEGEQWEGRVLKDFKTPVWS---------------VSWSLTGNLLAVADANN-VTLWK 285
K G ++ G D TPVW +SW LLA A ++ V ++K
Sbjct: 224 EYKPGNEF-GVSCPD-NTPVWKCVCTLAGYHSRSVYDISWCKQSGLLATACGDDMVRIFK 281
Query: 286 EAVDG 290
E V+G
Sbjct: 282 E-VEG 285
Score = 179 (68.1 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 69/262 (26%), Positives = 113/262 (43%)
Query: 48 LATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFND-HKSSVN 106
L L GHRG W W HPK G++LA+C D + IW E W +D H ++
Sbjct: 7 LQCLTGHRGRAWGAGW-HPK-GNVLATCGEDKTIRIWAEDASQRWVAKTVLSDGHSRTIR 64
Query: 107 SIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGAL 166
+AW+P G LA S D ++++ + G ++ + H V SVSW+ + G+L
Sbjct: 65 DVAWSP--CGQYLASASFDATVAIWDKKS-GEFECNATLEGHENEVKSVSWSKS---GSL 118
Query: 167 VGLGLLDPVQKLASCGCDNTVKVWKM-----YN----------GIWKMDCFPALQMHSDW 211
LA+C D +V VW++ Y + K++ P H D
Sbjct: 119 -----------LATCSRDKSVWVWEVAQEDEYECAAVLNTHTQDVKKVEWHP----HEDI 163
Query: 212 VRSVAWAPNLGLPKSTIASA--SQDGTVV-----IWTCAKEGEQWEGRVLKDFKT-PVWS 263
+ S ++ + L K +A + S T+V +W+ + +G D +T +W
Sbjct: 164 LASASYDNTIKLYKEDLADSDWSSFDTLVSHESTVWSISFDGSGNRLASCSDDQTVKIWQ 223
Query: 264 VSWSLTGNLLAVADANNVTLWK 285
+ GN V+ +N +WK
Sbjct: 224 -EYK-PGNEFGVSCPDNTPVWK 243
>UNIPROTKB|B4QFZ8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7240 "Drosophila simulans"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CM000362 OrthoDB:EOG45DV4X RefSeq:XP_002081558.1
UniGene:Dsi.12266 ProteinModelPortal:B4QFZ8
EnsemblMetazoa:FBtr0225561 GeneID:6734549 KEGG:dsi:Dsim_GD25651
FlyBase:FBgn0196936 Uniprot:B4QFZ8
Length = 335
Score = 220 (82.5 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 81/292 (27%), Positives = 128/292 (43%)
Query: 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAH 65
+ GH+ T+ ++ G+ LA+AS D++ I S+ + ATL+GH V V+W+
Sbjct: 54 LSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS- 112
Query: 66 PKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD 125
+ G +LA+CS D V IW+ +++ A N H V + W P + LA S D
Sbjct: 113 -RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKD--VLASASYD 169
Query: 126 GNISVFTATA-DGGWDTTRIDQAHPVGVTSVSWAPAM-APGA-LVGLGLLDPVQKLASCG 182
I +F D WD T +H TS W A G LV ++ +
Sbjct: 170 NTIKMFAEEPIDNDWDCTATLTSH----TSTVWGIDFDADGERLVSCSDDTTIKIWKAYH 225
Query: 183 CDNTVKV-WKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW- 240
NT V +WK C + Q HS + V+W GL IA+A D + I+
Sbjct: 226 PGNTAGVATPEQQTVWKCVCTVSGQ-HSRAIYDVSWCKLTGL----IATACGDDGIRIFK 280
Query: 241 --TCAKEGEQWEGRVLKD---FKTPVWSVSWS--LTGNLLAVADANNVTLWK 285
+ +K E ++ + V SV W+ + G L++ +D + +WK
Sbjct: 281 ETSDSKPDEPTFEQITAEEGAHDQDVNSVQWNPVVAGQLISCSDDGTIKIWK 332
Score = 173 (66.0 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
Identities = 39/110 (35%), Positives = 60/110 (54%)
Query: 50 TLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFND-HKSSVNSI 108
TL+GH+G +W VAW HPK G++ ASC D + IW N W+ +D HK ++ I
Sbjct: 9 TLQGHKGRIWGVAW-HPK-GNVFASCGEDKAIRIWSLTG-NTWSTKTILSDGHKRTIREI 65
Query: 109 AWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWA 158
W+P G LA S D ++++ ++ G ++ + H V SVSW+
Sbjct: 66 RWSP--CGQYLASASFDATTAIWSKSS-GEFECNATLEGHENEVKSVSWS 112
Score = 167 (63.8 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 71/293 (24%), Positives = 115/293 (39%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLS-NSASQHLATLKGHRGPVWQVAWAHPK 67
GH+ + VA G A+ D +I+I L+ N+ S GH+ + ++ W+ P
Sbjct: 12 GHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIRWS-P- 69
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGN 127
G LAS S+D IW + + A T H++ V S++W+ GL C S D +
Sbjct: 70 CGQYLASASFDATTAIWSKSSGEFECNA-TLEGHENEVKSVSWS-RSGGLLATC-SRDKS 126
Query: 128 ISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDN-- 185
+ ++ D ++ + H V V W P L + ++ A DN
Sbjct: 127 VWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTK--DVLASASYDNTIKMFAEEPIDNDW 184
Query: 186 --TVKVWKMYNGIWKMDCFPA----LQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVI 239
T + + +W +D F A L SD W P +T A+ + V
Sbjct: 185 DCTATLTSHTSTVWGID-FDADGERLVSCSDDTTIKIWKAYH--PGNTAGVATPEQQTV- 240
Query: 240 WTCAKEGEQWEGRVLKDFKTPVWSVSW-SLTGNLLAVADANNVTLWKEAVDGE 291
W C R + D VSW LTG + + + ++KE D +
Sbjct: 241 WKCVCTVSGQHSRAIYD-------VSWCKLTGLIATACGDDGIRIFKETSDSK 286
Score = 166 (63.5 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 41/125 (32%), Positives = 62/125 (49%)
Query: 179 ASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVV 238
ASCG D +++W + W + H +R + W+P G +ASAS D T
Sbjct: 30 ASCGEDKAIRIWSLTGNTWSTKTILS-DGHKRTIREIRWSP-CG---QYLASASFDATTA 84
Query: 239 IWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGEWQQVSV 297
IW+ GE L+ + V SVSWS +G LLA + +V +W+ A D E++ +V
Sbjct: 85 IWS-KSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAV 143
Query: 298 VEPQT 302
+ P T
Sbjct: 144 LNPHT 148
Score = 143 (55.4 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 57/188 (30%), Positives = 81/188 (43%)
Query: 26 LATASSDSSIKIIGLS--NSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVII 83
LA+AS D++IK+ ++ ATL H VW + + G L SCS D + I
Sbjct: 163 LASASYDNTIKMFAEEPIDNDWDCTATLTSHTSTVWGIDFDAD--GERLVSCSDDTTIKI 220
Query: 84 WKE---GN---------QNDWTQAHTFN-DHKSSVNSIAWAPHELGLSLACGSSDGNISV 130
WK GN Q W T + H ++ ++W ++ ACG DG I +
Sbjct: 221 WKAYHPGNTAGVATPEQQTVWKCVCTVSGQHSRAIYDVSWCKLTGLIATACGD-DG-IRI 278
Query: 131 FTATADGGWDTTRIDQ------AHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCD 184
F T+D D +Q AH V SV W P +A G L+ SC D
Sbjct: 279 FKETSDSKPDEPTFEQITAEEGAHDQDVNSVQWNPVVA-GQLI------------SCSDD 325
Query: 185 NTVKVWKM 192
T+K+WK+
Sbjct: 326 GTIKIWKV 333
Score = 136 (52.9 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
Identities = 35/127 (27%), Positives = 58/127 (45%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
LA+C D +V +W++ G + +C L H+ V+ V W P K +ASAS D T+
Sbjct: 118 LATCSRDKSVWIWEVA-GDDEFECAAVLNPHTQDVKRVVWHPT----KDVLASASYDNTI 172
Query: 238 VIWTCAKEGEQWE-GRVLKDFKTPVWSVSWSLTGN-LLAVADANNVTLWKEAVDGEWQQV 295
++ W+ L + VW + + G L++ +D + +WK G V
Sbjct: 173 KMFAEEPIDNDWDCTATLTSHTSTVWGIDFDADGERLVSCSDDTTIKIWKAYHPGNTAGV 232
Query: 296 SVVEPQT 302
+ E QT
Sbjct: 233 ATPEQQT 239
Score = 82 (33.9 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 27/101 (26%), Positives = 41/101 (40%)
Query: 96 HTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDT-TRIDQAHPVGVTS 154
HT HK + +AW P + +CG D I +++ T + W T T + H +
Sbjct: 8 HTLQGHKGRIWGVAWHPKG-NVFASCGE-DKAIRIWSLTGNT-WSTKTILSDGHKRTIRE 64
Query: 155 VSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNG 195
+ W+P G Q LAS D T +W +G
Sbjct: 65 IRWSPC---------G-----QYLASASFDATTAIWSKSSG 91
>UNIPROTKB|B0XAF3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7176 "Culex quinquefasciatus"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:DS232580 RefSeq:XP_001866625.1 UniGene:Cpi.8879
ProteinModelPortal:B0XAF3 STRING:B0XAF3
EnsemblMetazoa:CPIJ016096-RA GeneID:6049938
KEGG:cqu:CpipJ_CPIJ016096 VectorBase:CPIJ016096 PhylomeDB:B0XAF3
Uniprot:B0XAF3
Length = 338
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 90/307 (29%), Positives = 139/307 (45%)
Query: 1 MPAQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQ 60
+P + GH T+ DVA G+ LA+AS D+++ I + + ATL+GH V
Sbjct: 50 VPKTVLSDGHTRTIRDVAWSPCGRFLASASFDATVAIWDRRSGEFECNATLEGHENEVKS 109
Query: 61 VAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLA 120
V+W+ K G++LA+CS D V IW+ ++++ A N H V + W P+E LA
Sbjct: 110 VSWS--KSGALLATCSRDKSVWIWEVAQEDEYECAAVLNTHSQDVKKVEWHPNED--VLA 165
Query: 121 CGSSDGNISVFTAT-ADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLA 179
S D I ++ AD W + +H V S+++ A G+ +LA
Sbjct: 166 SASYDNTIQLYREDLADSDWSSFDTLASHDSTVWSIAFD---ASGS-----------RLA 211
Query: 180 SCGCDNTVKVWKMY-----------NG---IWKMDCFPALQMHSDWVRSVAWAPNLGLPK 225
SC D TV++W+ Y +G +WK C + HS V ++W GL
Sbjct: 212 SCSDDQTVRIWQEYKPGNEFGVACPDGKTPVWKCVCTLS-GFHSRAVYDISWCKKTGL-- 268
Query: 226 STIASASQDGTVVIW--TCAKEGEQ--WEGRVLKDFKTP-VWSVSWSLT--GNLLAVADA 278
IA+A D V I+ + +E K + +V WS T G L+ +D
Sbjct: 269 --IATACGDDMVRIFREVAGSPANEPTFEMVASKHAHSQDANTVEWSPTVAGLLVTTSDD 326
Query: 279 NNVTLWK 285
+V LWK
Sbjct: 327 GDVKLWK 333
Score = 160 (61.4 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 38/121 (31%), Positives = 59/121 (48%)
Query: 48 LATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFND-HKSSVN 106
L L GHRG VW W HP+ +LA+C D + IW + W +D H ++
Sbjct: 7 LQCLSGHRGRVWGAGW-HPR-DPVLATCGEDKTIRIWADDGTGRWVPKTVLSDGHTRTIR 64
Query: 107 SIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGAL 166
+AW+P G LA S D ++++ + G ++ + H V SVSW+ + GAL
Sbjct: 65 DVAWSP--CGRFLASASFDATVAIWDRRS-GEFECNATLEGHENEVKSVSWSKS---GAL 118
Query: 167 V 167
+
Sbjct: 119 L 119
Score = 156 (60.0 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 46/128 (35%), Positives = 68/128 (53%)
Query: 173 DPVQKLASCGCDNTVKVWKMYN-GIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASA 231
DPV LA+CG D T+++W G W + H+ +R VAW+P G +ASA
Sbjct: 26 DPV--LATCGEDKTIRIWADDGTGRWVPKTVLS-DGHTRTIRDVAWSP-CG---RFLASA 78
Query: 232 SQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDG 290
S D TV IW + GE L+ + V SVSWS +G LLA + +V +W+ A +
Sbjct: 79 SFDATVAIWD-RRSGEFECNATLEGHENEVKSVSWSKSGALLATCSRDKSVWIWEVAQED 137
Query: 291 EWQQVSVV 298
E++ +V+
Sbjct: 138 EYECAAVL 145
>UNIPROTKB|B4P7Q3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7245 "Drosophila yakuba"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000158 OrthoDB:EOG45DV4X RefSeq:XP_002091367.1
ProteinModelPortal:B4P7Q3 STRING:B4P7Q3 EnsemblMetazoa:FBtr0258798
GeneID:6530451 KEGG:dya:Dyak_GE12280 FlyBase:FBgn0230036
Uniprot:B4P7Q3
Length = 335
Score = 215 (80.7 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 82/293 (27%), Positives = 130/293 (44%)
Query: 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAH 65
+ GH+ T+ ++ G+ LA+AS D++ I S+ + ATL+GH V V+W+
Sbjct: 54 LSDGHKRTIREIQWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS- 112
Query: 66 PKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAP-HELGLSLACGSS 124
+ G +LA+CS D V IW+ +++ A N H V + W P E+ LA S
Sbjct: 113 -RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVWHPTKEI---LASASY 168
Query: 125 DGNISVFTATA-DGGWDTTRIDQAHPVGVTSVSWAPAM-APGA-LVGLGLLDPVQKLASC 181
D I ++ D WD T +H TS W A G LV V+ +
Sbjct: 169 DNTIKMYAEEPIDNDWDCTATLTSH----TSTIWGIDFDADGERLVSCSDDTTVKIWRAY 224
Query: 182 GCDNTVKVWKM-YNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW 240
N+ V +WK C + Q HS + V+W GL IA+A D + I+
Sbjct: 225 HPGNSAGVATPDQQTVWKCVCTLSGQ-HSRAIYDVSWCKLTGL----IATACGDDGIRIF 279
Query: 241 ---TCAKEGEQ-WEGRVLKD--FKTPVWSVSWS--LTGNLLAVADANNVTLWK 285
+ +K E +E ++ V SV W+ + G L++ +D + +WK
Sbjct: 280 KETSDSKPDEPTFEQLTAEESAHDQDVNSVQWNPVVAGQLISCSDDGTIKIWK 332
Score = 173 (66.0 bits), Expect = 7.4e-21, Sum P(2) = 7.4e-21
Identities = 39/110 (35%), Positives = 60/110 (54%)
Query: 50 TLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFND-HKSSVNSI 108
TL+GH+G +W VAW HPK G++ ASC D + IW N W+ +D HK ++ I
Sbjct: 9 TLQGHKGRIWGVAW-HPK-GNVFASCGEDKAIRIWSLTG-NTWSTKTILSDGHKRTIREI 65
Query: 109 AWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWA 158
W+P G LA S D ++++ ++ G ++ + H V SVSW+
Sbjct: 66 QWSP--CGQYLASASFDATTAIWSKSS-GEFECNATLEGHENEVKSVSWS 112
Score = 167 (63.8 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 72/293 (24%), Positives = 116/293 (39%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLS-NSASQHLATLKGHRGPVWQVAWAHPK 67
GH+ + VA G A+ D +I+I L+ N+ S GH+ + ++ W+ P
Sbjct: 12 GHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIQWS-P- 69
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGN 127
G LAS S+D IW + + A T H++ V S++W+ GL C S D +
Sbjct: 70 CGQYLASASFDATTAIWSKSSGEFECNA-TLEGHENEVKSVSWS-RSGGLLATC-SRDKS 126
Query: 128 ISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDN-- 185
+ ++ D ++ + +H V V W P L + ++ A DN
Sbjct: 127 VWIWEVAGDDEFECAAVLNSHTQDVKRVVWHPTKE--ILASASYDNTIKMYAEEPIDNDW 184
Query: 186 --TVKVWKMYNGIWKMDCFPA----LQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVI 239
T + + IW +D F A L SD W P ++ A+ D V
Sbjct: 185 DCTATLTSHTSTIWGID-FDADGERLVSCSDDTTVKIWRAYH--PGNSAGVATPDQQTV- 240
Query: 240 WTCAKEGEQWEGRVLKDFKTPVWSVSW-SLTGNLLAVADANNVTLWKEAVDGE 291
W C R + D VSW LTG + + + ++KE D +
Sbjct: 241 WKCVCTLSGQHSRAIYD-------VSWCKLTGLIATACGDDGIRIFKETSDSK 286
Score = 158 (60.7 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 40/125 (32%), Positives = 61/125 (48%)
Query: 179 ASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVV 238
ASCG D +++W + W + H +R + W+P G +ASAS D T
Sbjct: 30 ASCGEDKAIRIWSLTGNTWSTKTILS-DGHKRTIREIQWSP-CG---QYLASASFDATTA 84
Query: 239 IWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGEWQQVSV 297
IW+ GE L+ + V SVSWS +G LLA + +V +W+ A D E++ +V
Sbjct: 85 IWS-KSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAV 143
Query: 298 VEPQT 302
+ T
Sbjct: 144 LNSHT 148
Score = 140 (54.3 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 56/188 (29%), Positives = 81/188 (43%)
Query: 26 LATASSDSSIKIIGLS--NSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVII 83
LA+AS D++IK+ ++ ATL H +W + + G L SCS D V I
Sbjct: 163 LASASYDNTIKMYAEEPIDNDWDCTATLTSHTSTIWGIDFDAD--GERLVSCSDDTTVKI 220
Query: 84 WKE---GN---------QNDWTQAHTFN-DHKSSVNSIAWAPHELGLSLACGSSDGNISV 130
W+ GN Q W T + H ++ ++W ++ ACG DG I +
Sbjct: 221 WRAYHPGNSAGVATPDQQTVWKCVCTLSGQHSRAIYDVSWCKLTGLIATACGD-DG-IRI 278
Query: 131 FTATADGGWDTTRIDQ------AHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCD 184
F T+D D +Q AH V SV W P +A G L+ SC D
Sbjct: 279 FKETSDSKPDEPTFEQLTAEESAHDQDVNSVQWNPVVA-GQLI------------SCSDD 325
Query: 185 NTVKVWKM 192
T+K+WK+
Sbjct: 326 GTIKIWKV 333
Score = 130 (50.8 bits), Expect = 7.4e-21, Sum P(2) = 7.4e-21
Identities = 33/127 (25%), Positives = 58/127 (45%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
LA+C D +V +W++ G + +C L H+ V+ V W P K +ASAS D T+
Sbjct: 118 LATCSRDKSVWIWEVA-GDDEFECAAVLNSHTQDVKRVVWHPT----KEILASASYDNTI 172
Query: 238 VIWTCAKEGEQWE-GRVLKDFKTPVWSVSWSLTGN-LLAVADANNVTLWKEAVDGEWQQV 295
++ W+ L + +W + + G L++ +D V +W+ G V
Sbjct: 173 KMYAEEPIDNDWDCTATLTSHTSTIWGIDFDADGERLVSCSDDTTVKIWRAYHPGNSAGV 232
Query: 296 SVVEPQT 302
+ + QT
Sbjct: 233 ATPDQQT 239
>UNIPROTKB|B4LJT7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7244 "Drosophila virilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH940648 OMA:SWKCVCT OrthoDB:EOG45DV4X
RefSeq:XP_002049403.1 ProteinModelPortal:B4LJT7 STRING:B4LJT7
EnsemblMetazoa:FBtr0237487 GeneID:6626094 KEGG:dvi:Dvir_GJ21562
FlyBase:FBgn0208682 InParanoid:B4LJT7 Uniprot:B4LJT7
Length = 331
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 86/302 (28%), Positives = 137/302 (45%)
Query: 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAH 65
+ GH+ T+ +V G+ LA+AS D++ I S + ATL+GH V V+W+
Sbjct: 54 LSDGHKRTIREVRWSPCGEYLASASFDATTAIW----SKHECTATLEGHENEVKSVSWS- 108
Query: 66 PKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD 125
+ G +LA+CS D V IW+ +++ A N H V + W P + LA S D
Sbjct: 109 -RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHSQDVKRVVWHPTKE--VLASASYD 165
Query: 126 GNISVFTATA-DGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCD 184
I +F +A D WD T +H V S+ + A G ++L SC D
Sbjct: 166 NTIKMFAESALDSDWDCTATLSSHTSTVWSIDFD---ADG-----------ERLVSCSDD 211
Query: 185 NTVKVWKMYN-----GI--------WKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASA 231
T+K+W+ Y+ GI WK C + + HS + V+W GL IASA
Sbjct: 212 ATLKIWRAYHPGNDAGIATPDKTTVWKCVCTLSGE-HSRAIYDVSWCKQTGL----IASA 266
Query: 232 -SQDGTVVIWTCA---KEGEQWEGRVLKD--FKTPVWSVSWS--LTGNLLAVADANNVTL 283
DG + C+ ++ +E ++ + V +V W+ G L++ +D + +
Sbjct: 267 CGDDGIRIFKECSDSKRDAPTFELLTAEESAHEQDVNAVEWNPVTAGQLISCSDDGTIKI 326
Query: 284 WK 285
WK
Sbjct: 327 WK 328
Score = 169 (64.5 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 74/295 (25%), Positives = 120/295 (40%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLS-NSASQHLATLKGHRGPVWQVAWAHPK 67
GH+ + VA G A+ D +I+I LS N+ + GH+ + +V W+ P
Sbjct: 12 GHKGRIWGVAWHPKGNSFASCGEDKAIRIWSLSGNTWTTKTILSDGHKRTIREVRWS-P- 69
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGN 127
G LAS S+D IW ++++ T T H++ V S++W+ GL C S D +
Sbjct: 70 CGEYLASASFDATTAIW---SKHECTA--TLEGHENEVKSVSWS-RSGGLLATC-SRDKS 122
Query: 128 ISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDN-- 185
+ ++ D ++ + AH V V W P L + ++ A D+
Sbjct: 123 VWIWEVAGDDEFECAAVLNAHSQDVKRVVWHPTKE--VLASASYDNTIKMFAESALDSDW 180
Query: 186 --TVKVWKMYNGIWKMDCFPA----LQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVI 239
T + + +W +D F A L SD W P + A+ D T V
Sbjct: 181 DCTATLSSHTSTVWSID-FDADGERLVSCSDDATLKIWRAYH--PGNDAGIATPDKTTV- 236
Query: 240 W--TCAKEGEQWEGRVLKDFKTPVWSVSW-SLTGNLLAVADANNVTLWKEAVDGE 291
W C GE R + D VSW TG + + + + ++KE D +
Sbjct: 237 WKCVCTLSGEH--SRAIYD-------VSWCKQTGLIASACGDDGIRIFKECSDSK 282
Score = 160 (61.4 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 39/110 (35%), Positives = 56/110 (50%)
Query: 50 TLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFND-HKSSVNSI 108
TL+GH+G +W VAW HPK G+ ASC D + IW N WT +D HK ++ +
Sbjct: 9 TLQGHKGRIWGVAW-HPK-GNSFASCGEDKAIRIWSLSG-NTWTTKTILSDGHKRTIREV 65
Query: 109 AWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWA 158
W+P G LA S D ++++ + T + H V SVSW+
Sbjct: 66 RWSP--CGEYLASASFDATTAIWSKH-----ECTATLEGHENEVKSVSWS 108
Score = 142 (55.0 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 41/136 (30%), Positives = 63/136 (46%)
Query: 164 GALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGL 223
G + G+ ASCG D +++W + W + H +R V W+P G
Sbjct: 15 GRIWGVAWHPKGNSFASCGEDKAIRIWSLSGNTWTTKTILS-DGHKRTIREVRWSP-CG- 71
Query: 224 PKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVT 282
+ASAS D T IW+ + EG + V SVSWS +G LLA + +V
Sbjct: 72 --EYLASASFDATTAIWSKHECTATLEGH-----ENEVKSVSWSRSGGLLATCSRDKSVW 124
Query: 283 LWKEAVDGEWQQVSVV 298
+W+ A D E++ +V+
Sbjct: 125 IWEVAGDDEFECAAVL 140
Score = 140 (54.3 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 55/188 (29%), Positives = 81/188 (43%)
Query: 26 LATASSDSSIKIIGLS--NSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVII 83
LA+AS D++IK+ S +S ATL H VW + + G L SCS D + I
Sbjct: 159 LASASYDNTIKMFAESALDSDWDCTATLSSHTSTVWSIDFDAD--GERLVSCSDDATLKI 216
Query: 84 WKEGNQ-ND-----------WTQAHTFN-DHKSSVNSIAWAPHELGLSLACGSSDGNISV 130
W+ + ND W T + +H ++ ++W ++ ACG DG I +
Sbjct: 217 WRAYHPGNDAGIATPDKTTVWKCVCTLSGEHSRAIYDVSWCKQTGLIASACGD-DG-IRI 274
Query: 131 FTATADGGWDT------TRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCD 184
F +D D T + AH V +V W P A G L+ SC D
Sbjct: 275 FKECSDSKRDAPTFELLTAEESAHEQDVNAVEWNPVTA-GQLI------------SCSDD 321
Query: 185 NTVKVWKM 192
T+K+WK+
Sbjct: 322 GTIKIWKL 329
>UNIPROTKB|B4HRQ6 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7238 "Drosophila sechellia"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH480816 OrthoDB:EOG45DV4X RefSeq:XP_002033907.1
ProteinModelPortal:B4HRQ6 EnsemblMetazoa:FBtr0203159 GeneID:6609216
KEGG:dse:Dsec_GM20174 FlyBase:FBgn0175057 Uniprot:B4HRQ6
Length = 335
Score = 220 (82.5 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 81/292 (27%), Positives = 128/292 (43%)
Query: 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAH 65
+ GH+ T+ ++ G+ LA+AS D++ I S+ + ATL+GH V V+W+
Sbjct: 54 LSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS- 112
Query: 66 PKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD 125
+ G +LA+CS D V IW+ +++ A N H V + W P + LA S D
Sbjct: 113 -RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKD--VLASASYD 169
Query: 126 GNISVFTATA-DGGWDTTRIDQAHPVGVTSVSWAPAM-APGA-LVGLGLLDPVQKLASCG 182
I +F D WD T +H TS W A G LV ++ +
Sbjct: 170 NTIKMFAEEPIDNDWDCTATLTSH----TSTVWGIDFDADGERLVSCSDDTTIKIWRAYH 225
Query: 183 CDNTVKV-WKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW- 240
NT V +WK C + Q HS + V+W GL IA+A D + I+
Sbjct: 226 PGNTAGVATPEQQTVWKCVCTVSGQ-HSRAIYDVSWCKLTGL----IATACGDDGIRIFK 280
Query: 241 --TCAKEGEQWEGRVLKD---FKTPVWSVSWS--LTGNLLAVADANNVTLWK 285
+ +K E ++ + V SV W+ + G L++ +D + +WK
Sbjct: 281 ETSDSKPDEPTFEQITAEEGAHDQDVNSVQWNPVVAGQLISCSDDGTIKIWK 332
Score = 170 (64.9 bits), Expect = 9.0e-21, Sum P(2) = 9.0e-21
Identities = 39/110 (35%), Positives = 59/110 (53%)
Query: 50 TLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFND-HKSSVNSI 108
TL+GH+G +W VAW HPK G++ ASC D + IW N W +D HK ++ I
Sbjct: 9 TLQGHKGRIWGVAW-HPK-GNVFASCGEDKAIRIWSLTG-NTWGTKTILSDGHKRTIREI 65
Query: 109 AWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWA 158
W+P G LA S D ++++ ++ G ++ + H V SVSW+
Sbjct: 66 RWSP--CGQYLASASFDATTAIWSKSS-GEFECNATLEGHENEVKSVSWS 112
Score = 164 (62.8 bits), Expect = 8.2e-10, P = 8.2e-10
Identities = 41/125 (32%), Positives = 62/125 (49%)
Query: 179 ASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVV 238
ASCG D +++W + W + H +R + W+P G +ASAS D T
Sbjct: 30 ASCGEDKAIRIWSLTGNTWGTKTILS-DGHKRTIREIRWSP-CG---QYLASASFDATTA 84
Query: 239 IWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGEWQQVSV 297
IW+ GE L+ + V SVSWS +G LLA + +V +W+ A D E++ +V
Sbjct: 85 IWS-KSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAV 143
Query: 298 VEPQT 302
+ P T
Sbjct: 144 LNPHT 148
Score = 163 (62.4 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 70/293 (23%), Positives = 114/293 (38%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLS-NSASQHLATLKGHRGPVWQVAWAHPK 67
GH+ + VA G A+ D +I+I L+ N+ GH+ + ++ W+ P
Sbjct: 12 GHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWGTKTILSDGHKRTIREIRWS-P- 69
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGN 127
G LAS S+D IW + + A T H++ V S++W+ GL C S D +
Sbjct: 70 CGQYLASASFDATTAIWSKSSGEFECNA-TLEGHENEVKSVSWS-RSGGLLATC-SRDKS 126
Query: 128 ISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDN-- 185
+ ++ D ++ + H V V W P L + ++ A DN
Sbjct: 127 VWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTK--DVLASASYDNTIKMFAEEPIDNDW 184
Query: 186 --TVKVWKMYNGIWKMDCFPA----LQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVI 239
T + + +W +D F A L SD W P +T A+ + V
Sbjct: 185 DCTATLTSHTSTVWGID-FDADGERLVSCSDDTTIKIWRAYH--PGNTAGVATPEQQTV- 240
Query: 240 WTCAKEGEQWEGRVLKDFKTPVWSVSW-SLTGNLLAVADANNVTLWKEAVDGE 291
W C R + D VSW LTG + + + ++KE D +
Sbjct: 241 WKCVCTVSGQHSRAIYD-------VSWCKLTGLIATACGDDGIRIFKETSDSK 286
Score = 140 (54.3 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 56/188 (29%), Positives = 81/188 (43%)
Query: 26 LATASSDSSIKIIGLS--NSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVII 83
LA+AS D++IK+ ++ ATL H VW + + G L SCS D + I
Sbjct: 163 LASASYDNTIKMFAEEPIDNDWDCTATLTSHTSTVWGIDFDAD--GERLVSCSDDTTIKI 220
Query: 84 WKE---GN---------QNDWTQAHTFN-DHKSSVNSIAWAPHELGLSLACGSSDGNISV 130
W+ GN Q W T + H ++ ++W ++ ACG DG I +
Sbjct: 221 WRAYHPGNTAGVATPEQQTVWKCVCTVSGQHSRAIYDVSWCKLTGLIATACGD-DG-IRI 278
Query: 131 FTATADGGWDTTRIDQ------AHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCD 184
F T+D D +Q AH V SV W P +A G L+ SC D
Sbjct: 279 FKETSDSKPDEPTFEQITAEEGAHDQDVNSVQWNPVVA-GQLI------------SCSDD 325
Query: 185 NTVKVWKM 192
T+K+WK+
Sbjct: 326 GTIKIWKV 333
Score = 133 (51.9 bits), Expect = 9.0e-21, Sum P(2) = 9.0e-21
Identities = 34/127 (26%), Positives = 58/127 (45%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
LA+C D +V +W++ G + +C L H+ V+ V W P K +ASAS D T+
Sbjct: 118 LATCSRDKSVWIWEVA-GDDEFECAAVLNPHTQDVKRVVWHPT----KDVLASASYDNTI 172
Query: 238 VIWTCAKEGEQWE-GRVLKDFKTPVWSVSWSLTGN-LLAVADANNVTLWKEAVDGEWQQV 295
++ W+ L + VW + + G L++ +D + +W+ G V
Sbjct: 173 KMFAEEPIDNDWDCTATLTSHTSTVWGIDFDADGERLVSCSDDTTIKIWRAYHPGNTAGV 232
Query: 296 SVVEPQT 302
+ E QT
Sbjct: 233 ATPEQQT 239
Score = 81 (33.6 bits), Expect = 9.8e-11, Sum P(2) = 9.8e-11
Identities = 27/101 (26%), Positives = 41/101 (40%)
Query: 96 HTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDT-TRIDQAHPVGVTS 154
HT HK + +AW P + +CG D I +++ T + W T T + H +
Sbjct: 8 HTLQGHKGRIWGVAWHPKG-NVFASCGE-DKAIRIWSLTGNT-WGTKTILSDGHKRTIRE 64
Query: 155 VSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNG 195
+ W+P G Q LAS D T +W +G
Sbjct: 65 IRWSPC---------G-----QYLASASFDATTAIWSKSSG 91
>FB|FBgn0033972 [details] [associations]
symbol:Ciao1 "Ciao1" species:7227 "Drosophila melanogaster"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE013599 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
OrthoDB:EOG45DV4X CTD:9391 GeneTree:ENSGT00700000104486
EMBL:AY061388 RefSeq:NP_610996.1 UniGene:Dm.630
ProteinModelPortal:Q7K1Y4 SMR:Q7K1Y4 IntAct:Q7K1Y4 STRING:Q7K1Y4
PaxDb:Q7K1Y4 PRIDE:Q7K1Y4 EnsemblMetazoa:FBtr0087460 GeneID:36655
KEGG:dme:Dmel_CG12797 UCSC:CG12797-RA FlyBase:FBgn0033972
InParanoid:Q7K1Y4 PhylomeDB:Q7K1Y4 GenomeRNAi:36655 NextBio:799718
Bgee:Q7K1Y4 Uniprot:Q7K1Y4
Length = 335
Score = 219 (82.2 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 81/292 (27%), Positives = 128/292 (43%)
Query: 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAH 65
+ GH+ T+ ++ G+ LA+AS D++ I S+ + ATL+GH V V+W+
Sbjct: 54 LSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS- 112
Query: 66 PKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD 125
+ G +LA+CS D V IW+ +++ A N H V + W P + LA S D
Sbjct: 113 -RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKD--ILASASYD 169
Query: 126 GNISVFTATA-DGGWDTTRIDQAHPVGVTSVSWAPAM-APGA-LVGLGLLDPVQKLASCG 182
I +F D WD T +H TS W A G LV ++ +
Sbjct: 170 NTIKMFAEEPIDNDWDCTATLTSH----TSTVWGIDFDADGERLVSCSDDTTIKIWRAYH 225
Query: 183 CDNTVKVWKM-YNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW- 240
NT V +WK C + Q HS + V+W GL IA+A D + I+
Sbjct: 226 PGNTAGVATPDQQTVWKCVCTVSGQ-HSRAIYDVSWCKLTGL----IATACGDDGIRIFK 280
Query: 241 --TCAKEGEQWEGRVLKD---FKTPVWSVSWS--LTGNLLAVADANNVTLWK 285
+ +K E ++ + V SV W+ + G L++ +D + +WK
Sbjct: 281 ESSDSKPDEPTFEQITAEEGAHDQDVNSVQWNPVVAGQLISCSDDGTIKIWK 332
Score = 173 (66.0 bits), Expect = 9.5e-21, Sum P(2) = 9.5e-21
Identities = 39/110 (35%), Positives = 60/110 (54%)
Query: 50 TLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFND-HKSSVNSI 108
TL+GH+G +W VAW HPK G++ ASC D + IW N W+ +D HK ++ I
Sbjct: 9 TLQGHKGRIWGVAW-HPK-GNVFASCGEDKAIRIWSLTG-NTWSTKTILSDGHKRTIREI 65
Query: 109 AWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWA 158
W+P G LA S D ++++ ++ G ++ + H V SVSW+
Sbjct: 66 RWSP--CGQYLASASFDATTAIWSKSS-GEFECNATLEGHENEVKSVSWS 112
Score = 171 (65.3 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 72/293 (24%), Positives = 116/293 (39%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLS-NSASQHLATLKGHRGPVWQVAWAHPK 67
GH+ + VA G A+ D +I+I L+ N+ S GH+ + ++ W+ P
Sbjct: 12 GHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIRWS-P- 69
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGN 127
G LAS S+D IW + + A T H++ V S++W+ GL C S D +
Sbjct: 70 CGQYLASASFDATTAIWSKSSGEFECNA-TLEGHENEVKSVSWS-RSGGLLATC-SRDKS 126
Query: 128 ISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDN-- 185
+ ++ D ++ + H V V W P L + ++ A DN
Sbjct: 127 VWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTK--DILASASYDNTIKMFAEEPIDNDW 184
Query: 186 --TVKVWKMYNGIWKMDCFPA----LQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVI 239
T + + +W +D F A L SD W P +T A+ D V
Sbjct: 185 DCTATLTSHTSTVWGID-FDADGERLVSCSDDTTIKIWRAYH--PGNTAGVATPDQQTV- 240
Query: 240 WTCAKEGEQWEGRVLKDFKTPVWSVSW-SLTGNLLAVADANNVTLWKEAVDGE 291
W C R + D VSW LTG + + + ++KE+ D +
Sbjct: 241 WKCVCTVSGQHSRAIYD-------VSWCKLTGLIATACGDDGIRIFKESSDSK 286
Score = 166 (63.5 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 41/125 (32%), Positives = 62/125 (49%)
Query: 179 ASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVV 238
ASCG D +++W + W + H +R + W+P G +ASAS D T
Sbjct: 30 ASCGEDKAIRIWSLTGNTWSTKTILS-DGHKRTIREIRWSP-CG---QYLASASFDATTA 84
Query: 239 IWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGEWQQVSV 297
IW+ GE L+ + V SVSWS +G LLA + +V +W+ A D E++ +V
Sbjct: 85 IWS-KSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAV 143
Query: 298 VEPQT 302
+ P T
Sbjct: 144 LNPHT 148
Score = 136 (52.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 55/188 (29%), Positives = 81/188 (43%)
Query: 26 LATASSDSSIKIIGLS--NSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVII 83
LA+AS D++IK+ ++ ATL H VW + + G L SCS D + I
Sbjct: 163 LASASYDNTIKMFAEEPIDNDWDCTATLTSHTSTVWGIDFDAD--GERLVSCSDDTTIKI 220
Query: 84 WKE---GN---------QNDWTQAHTFN-DHKSSVNSIAWAPHELGLSLACGSSDGNISV 130
W+ GN Q W T + H ++ ++W ++ ACG DG I +
Sbjct: 221 WRAYHPGNTAGVATPDQQTVWKCVCTVSGQHSRAIYDVSWCKLTGLIATACGD-DG-IRI 278
Query: 131 FTATADGGWDTTRIDQ------AHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCD 184
F ++D D +Q AH V SV W P +A G L+ SC D
Sbjct: 279 FKESSDSKPDEPTFEQITAEEGAHDQDVNSVQWNPVVA-GQLI------------SCSDD 325
Query: 185 NTVKVWKM 192
T+K+WK+
Sbjct: 326 GTIKIWKV 333
Score = 129 (50.5 bits), Expect = 9.5e-21, Sum P(2) = 9.5e-21
Identities = 33/127 (25%), Positives = 58/127 (45%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
LA+C D +V +W++ G + +C L H+ V+ V W P K +ASAS D T+
Sbjct: 118 LATCSRDKSVWIWEVA-GDDEFECAAVLNPHTQDVKRVVWHPT----KDILASASYDNTI 172
Query: 238 VIWTCAKEGEQWE-GRVLKDFKTPVWSVSWSLTGN-LLAVADANNVTLWKEAVDGEWQQV 295
++ W+ L + VW + + G L++ +D + +W+ G V
Sbjct: 173 KMFAEEPIDNDWDCTATLTSHTSTVWGIDFDADGERLVSCSDDTTIKIWRAYHPGNTAGV 232
Query: 296 SVVEPQT 302
+ + QT
Sbjct: 233 ATPDQQT 239
Score = 82 (33.9 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 27/101 (26%), Positives = 41/101 (40%)
Query: 96 HTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDT-TRIDQAHPVGVTS 154
HT HK + +AW P + +CG D I +++ T + W T T + H +
Sbjct: 8 HTLQGHKGRIWGVAWHPKG-NVFASCGE-DKAIRIWSLTGNT-WSTKTILSDGHKRTIRE 64
Query: 155 VSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNG 195
+ W+P G Q LAS D T +W +G
Sbjct: 65 IRWSPC---------G-----QYLASASFDATTAIWSKSSG 91
>UNIPROTKB|B3NQR5 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7220 "Drosophila erecta"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH954179 OrthoDB:EOG45DV4X RefSeq:XP_001975575.1
ProteinModelPortal:B3NQR5 EnsemblMetazoa:FBtr0142445 GeneID:6549053
KEGG:der:Dere_GG22391 FlyBase:FBgn0114563 Uniprot:B3NQR5
Length = 335
Score = 214 (80.4 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 80/292 (27%), Positives = 129/292 (44%)
Query: 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAH 65
+ GH+ T+ ++ G+ LA+AS D++ I S+ + ATL+GH V V+W+
Sbjct: 54 LSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS- 112
Query: 66 PKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD 125
+ G +LA+CS D V IW+ +++ A N H V + W P + LA S D
Sbjct: 113 -RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVWHPTKE--VLASASYD 169
Query: 126 GNISVFTAT-ADGGWDTTRIDQAHPVGVTSVSWAPAM-APGA-LVGLGLLDPVQKLASCG 182
I ++ D WD T +H TS W A G LV ++ +
Sbjct: 170 NTIKMYAEDPVDNDWDCTATLTSH----TSTIWGIDFDADGERLVSCSDDTTIKIWKAYH 225
Query: 183 CDNTVKVWKM-YNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW- 240
N+ V +WK C + Q HS + V+W GL IA+A D + I+
Sbjct: 226 PGNSAGVATPDQQTVWKCVCTLSGQ-HSRAIYDVSWCKLTGL----IATACGDDGIRIFK 280
Query: 241 --TCAKEGEQ-WEGRVLKD--FKTPVWSVSWS--LTGNLLAVADANNVTLWK 285
+ +K E +E ++ V SV W+ + G L++ +D + +WK
Sbjct: 281 ETSDSKPDEPTFEQLTAEEGAHDQDVNSVQWNPVVAGQLISCSDDGTIKIWK 332
Score = 169 (64.5 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 72/293 (24%), Positives = 115/293 (39%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLK-GHRGPVWQVAWAHPK 67
GH+ + VA G A+ D +I+I L+ S L GH+ + ++ W+ P
Sbjct: 12 GHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGSTWSTKTILSDGHKRTIREIRWS-P- 69
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGN 127
G LAS S+D IW + + A T H++ V S++W+ GL C S D +
Sbjct: 70 CGQYLASASFDATTAIWSKSSGEFECNA-TLEGHENEVKSVSWS-RSGGLLATC-SRDKS 126
Query: 128 ISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDN-- 185
+ ++ D ++ + +H V V W P L + ++ A DN
Sbjct: 127 VWIWEVAGDDEFECAAVLNSHTQDVKRVVWHPTKE--VLASASYDNTIKMYAEDPVDNDW 184
Query: 186 --TVKVWKMYNGIWKMDCFPA----LQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVI 239
T + + IW +D F A L SD W P ++ A+ D V
Sbjct: 185 DCTATLTSHTSTIWGID-FDADGERLVSCSDDTTIKIWKAYH--PGNSAGVATPDQQTV- 240
Query: 240 WTCAKEGEQWEGRVLKDFKTPVWSVSW-SLTGNLLAVADANNVTLWKEAVDGE 291
W C R + D VSW LTG + + + ++KE D +
Sbjct: 241 WKCVCTLSGQHSRAIYD-------VSWCKLTGLIATACGDDGIRIFKETSDSK 286
Score = 168 (64.2 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 38/110 (34%), Positives = 59/110 (53%)
Query: 50 TLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFND-HKSSVNSI 108
TL+GH+G +W VAW HPK G++ ASC D + IW W+ +D HK ++ I
Sbjct: 9 TLQGHKGRIWGVAW-HPK-GNVFASCGEDKAIRIWSLTGST-WSTKTILSDGHKRTIREI 65
Query: 109 AWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWA 158
W+P G LA S D ++++ ++ G ++ + H V SVSW+
Sbjct: 66 RWSP--CGQYLASASFDATTAIWSKSS-GEFECNATLEGHENEVKSVSWS 112
Score = 158 (60.7 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 40/125 (32%), Positives = 61/125 (48%)
Query: 179 ASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVV 238
ASCG D +++W + W + H +R + W+P G +ASAS D T
Sbjct: 30 ASCGEDKAIRIWSLTGSTWSTKTILS-DGHKRTIREIRWSP-CG---QYLASASFDATTA 84
Query: 239 IWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGEWQQVSV 297
IW+ GE L+ + V SVSWS +G LLA + +V +W+ A D E++ +V
Sbjct: 85 IWS-KSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAV 143
Query: 298 VEPQT 302
+ T
Sbjct: 144 LNSHT 148
Score = 142 (55.0 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 56/188 (29%), Positives = 81/188 (43%)
Query: 26 LATASSDSSIKIIGLS--NSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVII 83
LA+AS D++IK+ ++ ATL H +W + + G L SCS D + I
Sbjct: 163 LASASYDNTIKMYAEDPVDNDWDCTATLTSHTSTIWGIDFDAD--GERLVSCSDDTTIKI 220
Query: 84 WKE---GN---------QNDWTQAHTFN-DHKSSVNSIAWAPHELGLSLACGSSDGNISV 130
WK GN Q W T + H ++ ++W ++ ACG DG I +
Sbjct: 221 WKAYHPGNSAGVATPDQQTVWKCVCTLSGQHSRAIYDVSWCKLTGLIATACGD-DG-IRI 278
Query: 131 FTATADGGWDTTRIDQ------AHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCD 184
F T+D D +Q AH V SV W P +A G L+ SC D
Sbjct: 279 FKETSDSKPDEPTFEQLTAEEGAHDQDVNSVQWNPVVA-GQLI------------SCSDD 325
Query: 185 NTVKVWKM 192
T+K+WK+
Sbjct: 326 GTIKIWKV 333
Score = 133 (51.9 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 33/127 (25%), Positives = 58/127 (45%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
LA+C D +V +W++ G + +C L H+ V+ V W P K +ASAS D T+
Sbjct: 118 LATCSRDKSVWIWEVA-GDDEFECAAVLNSHTQDVKRVVWHPT----KEVLASASYDNTI 172
Query: 238 VIWTCAKEGEQWE-GRVLKDFKTPVWSVSWSLTGN-LLAVADANNVTLWKEAVDGEWQQV 295
++ W+ L + +W + + G L++ +D + +WK G V
Sbjct: 173 KMYAEDPVDNDWDCTATLTSHTSTIWGIDFDADGERLVSCSDDTTIKIWKAYHPGNSAGV 232
Query: 296 SVVEPQT 302
+ + QT
Sbjct: 233 ATPDQQT 239
>UNIPROTKB|Q7PS24 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7165 "Anopheles gambiae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:AAAB01008846 RefSeq:XP_310648.3 HSSP:P63005
ProteinModelPortal:Q7PS24 STRING:Q7PS24
EnsemblMetazoa:AGAP000444-RA GeneID:1271794
KEGG:aga:AgaP_AGAP000444 VectorBase:AGAP000444 CTD:1271794
PhylomeDB:Q7PS24 Uniprot:Q7PS24
Length = 341
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 93/315 (29%), Positives = 140/315 (44%)
Query: 3 AQKIET-GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQV 61
AQ + T GH T+ ++A G LA+AS D+++ + + + ATL+GH V V
Sbjct: 51 AQTVLTDGHTRTIRELAWSCCGHYLASASFDTTVAVWDKKSGEFECNATLEGHDNEVKSV 110
Query: 62 AWAHPKFGSILASCSYDGQVIIWK----EGNQNDWTQAHTFNDHKSSVNSIAWAPHELGL 117
W+ + G++LA+CS D V IW+ ++++ N H V + W P E L
Sbjct: 111 TWS--RSGNLLATCSRDKSVWIWEIHHAPDQEDEYECVAVLNGHTQDVKKVCWHPQE-DL 167
Query: 118 SLACGSSDGNISVFTAT-ADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQ 176
LA S D I ++ AD W+ ++H V S+S+ A G Q
Sbjct: 168 -LASASYDNTIRMYRQDLADSEWEMLEPLESHSSTVWSISFD---ATG-----------Q 212
Query: 177 KLASCGCDNTVKVWKMYN-----GI--------WKMDCFPALQMHSDWVRSVAWAPNLGL 223
+LASC D TVKVW+ Y GI WK C + HS V + W GL
Sbjct: 213 RLASCSEDTTVKVWQQYGPDNALGIPCPDRGTIWKCVCTLS-GYHSRSVYDIDWCKQTGL 271
Query: 224 PKSTIASASQDGTVVIWTCAKEGEQWEGR-----VLKDFKTPVWSVSWSLT--GNLLAVA 276
+A+A D TV I+ A + ++ E ++ V+W T G LL +
Sbjct: 272 ----LATACGDDTVRIFREASDSDRNEPTFELVVTVEAHSQDANKVAWHPTVPGLLLTAS 327
Query: 277 DANNVTLWKEAVDGE 291
D + LW + VD +
Sbjct: 328 DDGEIKLW-QYVDAD 341
Score = 150 (57.9 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 35/112 (31%), Positives = 54/112 (48%)
Query: 48 LATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFND-HKSSVN 106
L TL GH G VW AW HP G + ASC D + +W + + + W D H ++
Sbjct: 7 LQTLTGHAGRVWSAAW-HPG-GKLFASCGEDKTIRVWNKSDTDRWVAQTVLTDGHTRTIR 64
Query: 107 SIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWA 158
+AW+ G LA S D ++V+ + G ++ + H V SV+W+
Sbjct: 65 ELAWSC--CGHYLASASFDTTVAVWDKKS-GEFECNATLEGHDNEVKSVTWS 113
Score = 148 (57.2 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 72/303 (23%), Positives = 126/303 (41%)
Query: 8 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNS---ASQHLATLKGHRGPVWQVAWA 64
TGH V A GK A+ D +I++ S++ +Q + T GH + ++AW+
Sbjct: 11 TGHAGRVWSAAWHPGGKLFASCGEDKTIRVWNKSDTDRWVAQTVLT-DGHTRTIRELAWS 69
Query: 65 HPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSS 124
G LAS S+D V +W + ++ T H + V S+ W+ G LA S
Sbjct: 70 C--CGHYLASASFDTTVAVWDK-KSGEFECNATLEGHDNEVKSVTWS--RSGNLLATCSR 124
Query: 125 DGNISVF----TATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLAS 180
D ++ ++ + ++ + H V V W P LAS
Sbjct: 125 DKSVWIWEIHHAPDQEDEYECVAVLNGHTQDVKKVCWHPQE--------------DLLAS 170
Query: 181 CGCDNTVKVWK--MYNGIWKMDCFPALQMHSDWVRSVAW-APNLGLPK----STIASASQ 233
DNT+++++ + + W+M L+ HS V S+++ A L +T+ Q
Sbjct: 171 ASYDNTIRMYRQDLADSEWEM--LEPLESHSSTVWSISFDATGQRLASCSEDTTVKVWQQ 228
Query: 234 DG--TVVIWTCAKEGEQWEGR-VLKDFKT-PVWSVSWSLTGNLLAVADANN-VTLWKEAV 288
G + C G W+ L + + V+ + W LLA A ++ V +++EA
Sbjct: 229 YGPDNALGIPCPDRGTIWKCVCTLSGYHSRSVYDIDWCKQTGLLATACGDDTVRIFREAS 288
Query: 289 DGE 291
D +
Sbjct: 289 DSD 291
Score = 136 (52.9 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 48/136 (35%), Positives = 67/136 (49%)
Query: 174 PVQKL-ASCGCDNTVKVW-KMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASA 231
P KL ASCG D T++VW K W H+ +R +AW+ G +ASA
Sbjct: 24 PGGKLFASCGEDKTIRVWNKSDTDRWVAQTV-LTDGHTRTIRELAWSC-CG---HYLASA 78
Query: 232 SQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWK--EAV 288
S D TV +W K GE L+ V SV+WS +GNLLA + +V +W+ A
Sbjct: 79 SFDTTVAVWD-KKSGEFECNATLEGHDNEVKSVTWSRSGNLLATCSRDKSVWIWEIHHAP 137
Query: 289 D--GEWQQVSVVEPQT 302
D E++ V+V+ T
Sbjct: 138 DQEDEYECVAVLNGHT 153
>UNIPROTKB|B4JW81 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7222 "Drosophila grimshawi"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH916375 OMA:SWKCVCT OrthoDB:EOG45DV4X
RefSeq:XP_001995147.1 ProteinModelPortal:B4JW81 STRING:B4JW81
EnsemblMetazoa:FBtr0158402 GeneID:6569131 KEGG:dgr:Dgri_GH22988
FlyBase:FBgn0130445 InParanoid:B4JW81 Uniprot:B4JW81
Length = 331
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 88/302 (29%), Positives = 136/302 (45%)
Query: 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAH 65
+ GH+ T+ +V G+ LA+AS D++ I S + ATL+GH V V+W+
Sbjct: 54 LSDGHKRTIREVRWSPCGEYLASASFDATTAIW----SKHECNATLEGHENEVKSVSWSQ 109
Query: 66 PKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD 125
G +LA+CS D V IW+ +++ A N H V + W P + LA S D
Sbjct: 110 S--GGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPSKE--ILASASYD 165
Query: 126 GNISVFTATA-DGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCD 184
I ++ +A D WD T +H V S+ + A G ++L SC D
Sbjct: 166 NTIKMYAESALDSDWDCTATLSSHTSTVWSIDFE---ADG-----------ERLVSCSDD 211
Query: 185 NTVKVWKMYN-----GI--------WKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASA 231
T+K+W+ Y+ GI WK C A Q HS V V+W GL IASA
Sbjct: 212 TTLKIWRAYHPGNEAGIATPDKTTVWKCVCTVAGQ-HSRAVYDVSWCKLTGL----IASA 266
Query: 232 SQDGTVVIWTCAKEGEQWEG--RVL----KDFKTPVWSVSWS--LTGNLLAVADANNVTL 283
D + I+ + + ++ E +L + V +V W+ G L++ +D + +
Sbjct: 267 CGDDGIRIFKESSDSKRDEPTFELLTAEESAHEQDVNAVEWNPVTAGQLISCSDDGTIKI 326
Query: 284 WK 285
WK
Sbjct: 327 WK 328
Score = 170 (64.9 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 72/293 (24%), Positives = 117/293 (39%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLS-NSASQHLATLKGHRGPVWQVAWAHPK 67
GH+ + VA G A+ D +I+I S N+ + GH+ + +V W+ P
Sbjct: 12 GHKGRIWGVAWHPKGNSFASCGEDKAIRIWSQSGNTWTTKTILSDGHKRTIREVRWS-P- 69
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGN 127
G LAS S+D IW + N T H++ V S++W+ GL C S D +
Sbjct: 70 CGEYLASASFDATTAIWSKHECNA-----TLEGHENEVKSVSWSQSG-GLLATC-SRDKS 122
Query: 128 ISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDN-- 185
+ ++ D ++ + AH V V W P+ L + ++ A D+
Sbjct: 123 VWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPSKE--ILASASYDNTIKMYAESALDSDW 180
Query: 186 --TVKVWKMYNGIWKMDCFPA----LQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVI 239
T + + +W +D F A L SD W P + A+ D T V
Sbjct: 181 DCTATLSSHTSTVWSID-FEADGERLVSCSDDTTLKIWRAYH--PGNEAGIATPDKTTV- 236
Query: 240 WTCAKEGEQWEGRVLKDFKTPVWSVSW-SLTGNLLAVADANNVTLWKEAVDGE 291
W C V V+ VSW LTG + + + + ++KE+ D +
Sbjct: 237 WKCVCT-------VAGQHSRAVYDVSWCKLTGLIASACGDDGIRIFKESSDSK 282
Score = 160 (61.4 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 38/110 (34%), Positives = 56/110 (50%)
Query: 50 TLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFND-HKSSVNSI 108
TL+GH+G +W VAW HPK G+ ASC D + IW + N WT +D HK ++ +
Sbjct: 9 TLQGHKGRIWGVAW-HPK-GNSFASCGEDKAIRIWSQSG-NTWTTKTILSDGHKRTIREV 65
Query: 109 AWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWA 158
W+P G LA S D ++++ + + H V SVSW+
Sbjct: 66 RWSP--CGEYLASASFDATTAIWSKH-----ECNATLEGHENEVKSVSWS 108
Score = 146 (56.5 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 42/140 (30%), Positives = 63/140 (45%)
Query: 164 GALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGL 223
G + G+ ASCG D +++W W + H +R V W+P G
Sbjct: 15 GRIWGVAWHPKGNSFASCGEDKAIRIWSQSGNTWTTKTILS-DGHKRTIREVRWSP-CG- 71
Query: 224 PKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVT 282
+ASAS D T IW+ + EG + V SVSWS +G LLA + +V
Sbjct: 72 --EYLASASFDATTAIWSKHECNATLEGH-----ENEVKSVSWSQSGGLLATCSRDKSVW 124
Query: 283 LWKEAVDGEWQQVSVVEPQT 302
+W+ A D E++ +V+ T
Sbjct: 125 IWEVAGDDEFECAAVLNAHT 144
Score = 135 (52.6 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 56/188 (29%), Positives = 80/188 (42%)
Query: 26 LATASSDSSIKIIGLS--NSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVII 83
LA+AS D++IK+ S +S ATL H VW + + G L SCS D + I
Sbjct: 159 LASASYDNTIKMYAESALDSDWDCTATLSSHTSTVWSIDFEAD--GERLVSCSDDTTLKI 216
Query: 84 WKE---GNQND---------WTQAHTF-NDHKSSVNSIAWAPHELGLSLACGSSDGNISV 130
W+ GN+ W T H +V ++W ++ ACG DG I +
Sbjct: 217 WRAYHPGNEAGIATPDKTTVWKCVCTVAGQHSRAVYDVSWCKLTGLIASACGD-DG-IRI 274
Query: 131 FTATADGGWDT------TRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCD 184
F ++D D T + AH V +V W P A G L+ SC D
Sbjct: 275 FKESSDSKRDEPTFELLTAEESAHEQDVNAVEWNPVTA-GQLI------------SCSDD 321
Query: 185 NTVKVWKM 192
T+K+WK+
Sbjct: 322 GTIKIWKL 329
>UNIPROTKB|B4MY77 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7260 "Drosophila willistoni"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 OMA:SWKCVCT OrthoDB:EOG45DV4X EMBL:CH963894
RefSeq:XP_002066080.1 ProteinModelPortal:B4MY77 STRING:B4MY77
EnsemblMetazoa:FBtr0252775 GeneID:6643305 KEGG:dwi:Dwil_GK22124
FlyBase:FBgn0224109 InParanoid:B4MY77 Uniprot:B4MY77
Length = 335
Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 84/293 (28%), Positives = 132/293 (45%)
Query: 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAH 65
+ GH+ T+ ++ G+ LA+AS D++ I S+ + ATL+GH V V+W+
Sbjct: 54 LSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS- 112
Query: 66 PKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAP-HELGLSLACGSS 124
K G +LA+CS D V IW+ +++ A N H V + W P E+ LA S
Sbjct: 113 -KSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKEI---LASASY 168
Query: 125 DGNISVFTATA-DGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASC-- 181
D I +F +A D WD T +H V S+ + A G + D K+
Sbjct: 169 DNTIKMFAESALDSDWDCTATLSSHTSTVWSIDFD---ADGERLVSCSDDTTLKIWRAYH 225
Query: 182 -GCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW 240
G D V +WK C + Q HS + V+W GL IA+A D + I+
Sbjct: 226 PGNDAGVATPDKQT-VWKCVCTLSGQ-HSRAIYDVSWCKLTGL----IATACGDDGIRIF 279
Query: 241 ---TCAKEGEQWEGRVLKD---FKTPVWSVSWS--LTGNLLAVADANNVTLWK 285
+ +K E +V + + V SV W+ + G L++ +D + +WK
Sbjct: 280 KESSDSKRDEPTFEQVTAEESAHEQDVNSVEWNPVMAGQLISCSDDGTIKIWK 332
Score = 173 (66.0 bits), Expect = 6.9e-11, P = 6.9e-11
Identities = 72/293 (24%), Positives = 115/293 (39%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLS-NSASQHLATLKGHRGPVWQVAWAHPK 67
GH+ + VA G A+ D +I+I LS NS S GH+ + ++ W+ P
Sbjct: 12 GHKGRIWGVAWHPKGNTFASCGEDKAIRIWSLSGNSWSTKTILSDGHKRTIREIRWS-P- 69
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGN 127
G LAS S+D IW + + A T H++ V S++W+ GL C S D +
Sbjct: 70 CGQYLASASFDATTAIWSKSSGEFECNA-TLEGHENEVKSVSWSKSG-GLLATC-SRDKS 126
Query: 128 ISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDN-- 185
+ ++ D ++ + H V V W P L + ++ A D+
Sbjct: 127 VWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKE--ILASASYDNTIKMFAESALDSDW 184
Query: 186 --TVKVWKMYNGIWKMDCFPA----LQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVI 239
T + + +W +D F A L SD W P + A+ D V
Sbjct: 185 DCTATLSSHTSTVWSID-FDADGERLVSCSDDTTLKIWRAYH--PGNDAGVATPDKQTV- 240
Query: 240 WTCAKEGEQWEGRVLKDFKTPVWSVSW-SLTGNLLAVADANNVTLWKEAVDGE 291
W C R + D VSW LTG + + + ++KE+ D +
Sbjct: 241 WKCVCTLSGQHSRAIYD-------VSWCKLTGLIATACGDDGIRIFKESSDSK 286
Score = 172 (65.6 bits), Expect = 9.0e-11, P = 9.0e-11
Identities = 39/110 (35%), Positives = 59/110 (53%)
Query: 50 TLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFND-HKSSVNSI 108
TL+GH+G +W VAW HPK G+ ASC D + IW N W+ +D HK ++ I
Sbjct: 9 TLQGHKGRIWGVAW-HPK-GNTFASCGEDKAIRIWSLSG-NSWSTKTILSDGHKRTIREI 65
Query: 109 AWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWA 158
W+P G LA S D ++++ ++ G ++ + H V SVSW+
Sbjct: 66 RWSP--CGQYLASASFDATTAIWSKSS-GEFECNATLEGHENEVKSVSWS 112
Score = 165 (63.1 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 41/125 (32%), Positives = 62/125 (49%)
Query: 179 ASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVV 238
ASCG D +++W + W + H +R + W+P G +ASAS D T
Sbjct: 30 ASCGEDKAIRIWSLSGNSWSTKTILS-DGHKRTIREIRWSP-CG---QYLASASFDATTA 84
Query: 239 IWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGEWQQVSV 297
IW+ GE L+ + V SVSWS +G LLA + +V +W+ A D E++ +V
Sbjct: 85 IWS-KSSGEFECNATLEGHENEVKSVSWSKSGGLLATCSRDKSVWIWEVAGDDEFECAAV 143
Query: 298 VEPQT 302
+ P T
Sbjct: 144 LNPHT 148
Score = 154 (59.3 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 59/188 (31%), Positives = 82/188 (43%)
Query: 26 LATASSDSSIKIIGLS--NSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVII 83
LA+AS D++IK+ S +S ATL H VW + + G L SCS D + I
Sbjct: 163 LASASYDNTIKMFAESALDSDWDCTATLSSHTSTVWSIDFDAD--GERLVSCSDDTTLKI 220
Query: 84 WKE---GN---------QNDWTQAHTFN-DHKSSVNSIAWAPHELGLSLACGSSDGNISV 130
W+ GN Q W T + H ++ ++W ++ ACG DG I +
Sbjct: 221 WRAYHPGNDAGVATPDKQTVWKCVCTLSGQHSRAIYDVSWCKLTGLIATACGD-DG-IRI 278
Query: 131 FTATADGGWDTTRIDQ------AHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCD 184
F ++D D +Q AH V SV W P MA G L+ SC D
Sbjct: 279 FKESSDSKRDEPTFEQVTAEESAHEQDVNSVEWNPVMA-GQLI------------SCSDD 325
Query: 185 NTVKVWKM 192
T+K+WKM
Sbjct: 326 GTIKIWKM 333
>UNIPROTKB|B4KTK4 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7230 "Drosophila mojavensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH933808 OrthoDB:EOG45DV4X RefSeq:XP_002005652.1
ProteinModelPortal:B4KTK4 EnsemblMetazoa:FBtr0169681 GeneID:6579773
KEGG:dmo:Dmoj_GI18956 FlyBase:FBgn0141695 InParanoid:B4KTK4
Uniprot:B4KTK4
Length = 331
Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 84/303 (27%), Positives = 139/303 (45%)
Query: 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAH 65
+ GH+ T+ +V G+ LA+AS D++ I S + ATL+GH V V+W+
Sbjct: 54 LSDGHKRTIREVRWSPCGEYLASASFDATTAIW----SKHECTATLEGHENEVKSVSWS- 108
Query: 66 PKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAP-HELGLSLACGSS 124
+ G +LA+CS D V IW+ +++ A N H V + W P E+ LA S
Sbjct: 109 -RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHSQDVKRVVWHPTKEI---LASASY 164
Query: 125 DGNISVFTATA-DGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGC 183
D I ++ +A D WD T +H V S+ + A G ++L SC
Sbjct: 165 DNTIKMYAESALDSDWDCTATLSSHTSTVWSIDFD---ADG-----------ERLVSCSD 210
Query: 184 DNTVKVWKMYN-----GI--------WKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIAS 230
D T+K+W+ Y+ GI WK C + +H+ + V+W GL IAS
Sbjct: 211 DATLKIWRAYHPGNEAGIATPDKTTVWKCVCTLS-GLHTRAIYDVSWCKLTGL----IAS 265
Query: 231 ASQDGTVVIWTCAKEGEQ----WEGRVLKD--FKTPVWSVSWSLT--GNLLAVADANNVT 282
A D + I+ + + ++ +E ++ + V +V W+ G L++ +D +
Sbjct: 266 ACGDDAIRIFKESSDSKRDAPSFELLTSEESAHEQDVNAVEWNPVNVGQLISCSDDGTIK 325
Query: 283 LWK 285
+WK
Sbjct: 326 IWK 328
Score = 170 (64.9 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 73/293 (24%), Positives = 120/293 (40%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLS-NSASQHLATLKGHRGPVWQVAWAHPK 67
GH+ + VA G A+ D +I+I LS N+ + GH+ + +V W+ P
Sbjct: 12 GHKGRIWGVAWHPKGNSFASCGEDKAIRIWSLSGNTWTTKTILSDGHKRTIREVRWS-P- 69
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGN 127
G LAS S+D IW ++++ T T H++ V S++W+ GL C S D +
Sbjct: 70 CGEYLASASFDATTAIW---SKHECTA--TLEGHENEVKSVSWS-RSGGLLATC-SRDKS 122
Query: 128 ISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDN-- 185
+ ++ D ++ + AH V V W P L + ++ A D+
Sbjct: 123 VWIWEVAGDDEFECAAVLNAHSQDVKRVVWHPTKE--ILASASYDNTIKMYAESALDSDW 180
Query: 186 --TVKVWKMYNGIWKMDCFPA----LQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVI 239
T + + +W +D F A L SD W P + A+ D T V
Sbjct: 181 DCTATLSSHTSTVWSID-FDADGERLVSCSDDATLKIWRAYH--PGNEAGIATPDKTTV- 236
Query: 240 WTCAKEGEQWEGRVLKDFKTPVWSVSW-SLTGNLLAVADANNVTLWKEAVDGE 291
W C R + D VSW LTG + + + + ++KE+ D +
Sbjct: 237 WKCVCTLSGLHTRAIYD-------VSWCKLTGLIASACGDDAIRIFKESSDSK 282
Score = 160 (61.4 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 39/110 (35%), Positives = 56/110 (50%)
Query: 50 TLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFND-HKSSVNSI 108
TL+GH+G +W VAW HPK G+ ASC D + IW N WT +D HK ++ +
Sbjct: 9 TLQGHKGRIWGVAW-HPK-GNSFASCGEDKAIRIWSLSG-NTWTTKTILSDGHKRTIREV 65
Query: 109 AWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWA 158
W+P G LA S D ++++ + T + H V SVSW+
Sbjct: 66 RWSP--CGEYLASASFDATTAIWSKH-----ECTATLEGHENEVKSVSWS 108
Score = 142 (55.0 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 41/136 (30%), Positives = 63/136 (46%)
Query: 164 GALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGL 223
G + G+ ASCG D +++W + W + H +R V W+P G
Sbjct: 15 GRIWGVAWHPKGNSFASCGEDKAIRIWSLSGNTWTTKTILS-DGHKRTIREVRWSP-CG- 71
Query: 224 PKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVT 282
+ASAS D T IW+ + EG + V SVSWS +G LLA + +V
Sbjct: 72 --EYLASASFDATTAIWSKHECTATLEGH-----ENEVKSVSWSRSGGLLATCSRDKSVW 124
Query: 283 LWKEAVDGEWQQVSVV 298
+W+ A D E++ +V+
Sbjct: 125 IWEVAGDDEFECAAVL 140
Score = 134 (52.2 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 54/188 (28%), Positives = 81/188 (43%)
Query: 26 LATASSDSSIKIIGLS--NSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVII 83
LA+AS D++IK+ S +S ATL H VW + + G L SCS D + I
Sbjct: 159 LASASYDNTIKMYAESALDSDWDCTATLSSHTSTVWSIDFDAD--GERLVSCSDDATLKI 216
Query: 84 WKE---GNQND---------WTQAHTFND-HKSSVNSIAWAPHELGLSLACGSSDGNISV 130
W+ GN+ W T + H ++ ++W ++ ACG D I +
Sbjct: 217 WRAYHPGNEAGIATPDKTTVWKCVCTLSGLHTRAIYDVSWCKLTGLIASACG--DDAIRI 274
Query: 131 FTATADGGWDT------TRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCD 184
F ++D D T + AH V +V W P V +G +L SC D
Sbjct: 275 FKESSDSKRDAPSFELLTSEESAHEQDVNAVEWNP-------VNVG------QLISCSDD 321
Query: 185 NTVKVWKM 192
T+K+WK+
Sbjct: 322 GTIKIWKL 329
>UNIPROTKB|I3LR40 [details] [associations]
symbol:SEH1L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051315 "attachment of spindle microtubules to
kinetochore involved in mitotic sister chromatid segregation"
evidence=IEA] [GO:0007080 "mitotic metaphase plate congression"
evidence=IEA] [GO:0006999 "nuclear pore organization" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0000776 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0051315 GO:GO:0007080 GO:GO:0006999
GeneTree:ENSGT00550000074999 OMA:YEAPDIM EMBL:FP565312
Ensembl:ENSSSCT00000023051 Uniprot:I3LR40
Length = 324
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 64/209 (30%), Positives = 100/209 (47%)
Query: 41 SNSASQHL-ATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKE--GNQND------ 91
S S H A+ K H G VW+V WAHP+FG +LASCS+D +W+E G ND
Sbjct: 5 SESGDWHCTASWKTHSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQS 64
Query: 92 -WTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATAD---GGWDTTRIDQA 147
W + T D ++SV + +AP +GL LA S+DG + ++ A W + +
Sbjct: 65 HWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQH-EVS 123
Query: 148 HPVGVTSVSWAPAM--APGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPAL 205
+ + +SW P+ A ++ +G D S V++++ K L
Sbjct: 124 CKLSCSCISWNPSSSRAHPPMIAVGSDD-----GSPNAMAKVQIFEYNENTRKYAKAETL 178
Query: 206 QMHSDWVRSVAWAPNLGLPKSTIASASQD 234
+D V +A+APNLG +A A++D
Sbjct: 179 MTVTDPVHDIAFAPNLGRSFHILAIATKD 207
Score = 160 (61.4 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 62/230 (26%), Positives = 106/230 (46%)
Query: 89 QNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATAD---GGWDTTRID 145
Q+ W + T D ++SV + +AP +GL LA S+DG + ++ A W +
Sbjct: 63 QSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQH-E 121
Query: 146 QAHPVGVTSVSWAPAM--APGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFP 203
+ + + +SW P+ A ++ +G D S V++++ K
Sbjct: 122 VSCKLSCSCISWNPSSSRAHPPMIAVGSDD-----GSPNAMAKVQIFEYNENTRKYAKAE 176
Query: 204 ALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCA----KE-----GE-QWEGRV 253
L +D V +A+APNLG +A A++D V I+T KE G ++E +V
Sbjct: 177 TLMTVTDPVHDIAFAPNLGRSFHILAIATKD--VRIFTLKPVSRKELTSSGGPTKFEIQV 234
Query: 254 LKDF---KTPVWSVSWSLTGNLLAVA-DANNVTLWKEAVDGEWQQVSVVE 299
+ F + VW VSW++TG +LA + D V LWK W+ +++
Sbjct: 235 VAQFDNHNSQVWRVSWNITGTVLASSGDDGCVRLWKANYMDNWKCTGILK 284
>SGD|S000002675 [details] [associations]
symbol:CIA1 "Component of cytosolic iron-sulfur protein
assembly (CIA) machinery" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal
large subunit export from nucleus" evidence=IMP] [GO:0016226
"iron-sulfur cluster assembly" evidence=IGI;IMP] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0002098 "tRNA
wobble uridine modification" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000002675 GO:GO:0005829
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BK006938 GO:GO:0016226 EMBL:U51030 GO:GO:0002098 GO:GO:0000055
HOGENOM:HOG000208901 GeneTree:ENSGT00700000104486 OMA:TAIWENI
OrthoDB:EOG4CVKH5 PIR:S70127 RefSeq:NP_010553.3 RefSeq:NP_010559.3
PDB:2HES PDBsum:2HES ProteinModelPortal:Q05583 SMR:Q05583
DIP:DIP-1836N IntAct:Q05583 MINT:MINT-405749 STRING:Q05583
PaxDb:Q05583 PeptideAtlas:Q05583 EnsemblFungi:YDR267C GeneID:851860
GeneID:851866 KEGG:sce:YDR267C KEGG:sce:YDR273W CYGD:YDR267c
EvolutionaryTrace:Q05583 NextBio:969800 Genevestigator:Q05583
GermOnline:YDR267C Uniprot:Q05583
Length = 330
Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 83/289 (28%), Positives = 126/289 (43%)
Query: 18 AMDFYGKRLATASSDSSIKIIGLSNSASQHLATLK--GHRGPVWQVAWAHPKFGSILASC 75
+ DF LAT S+D IK++ + + L H+ + VAW P S+LA+
Sbjct: 19 SFDFSQGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAW-RPHT-SLLAAG 76
Query: 76 SYDGQVIIWKEGNQNDWT----QAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVF 131
S+D V IW + D T H++ V +AW+ G LA S D ++ ++
Sbjct: 77 SFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSND--GYYLATCSRDKSVWIW 134
Query: 132 TATADGG-WDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVW 190
G ++ + Q H V V W P+ A LAS D+TV++W
Sbjct: 135 ETDESGEEYECISVLQEHSQDVKHVIWHPSEA--------------LLASSSYDDTVRIW 180
Query: 191 KMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGE--- 247
K Y+ W +C L H V S + G+ + + S S D TV +W + E
Sbjct: 181 KDYDDDW--ECVAVLNGHEGTVWSSDFDKTEGVFR--LCSGSDDSTVRVWKYMGDDEDDQ 236
Query: 248 -QWEGR-VLKDF-KTPVWSVSWSLTGNLLAVADANNVTLWKEAVDGEWQ 293
+W +L D K V++V+W G L+A A+ V E VDGEW+
Sbjct: 237 QEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWK 284
Score = 192 (72.6 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 73/245 (29%), Positives = 105/245 (42%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQH--LATLKGHRGPVWQVAWAHP 66
GHE+ V VA G LAT S D S+ I S ++ ++ L+ H V V W HP
Sbjct: 105 GHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIW-HP 163
Query: 67 KFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDG 126
++LAS SYD V IWK+ + +DW N H+ +V S + E L GS D
Sbjct: 164 S-EALLASSSYDDTVRIWKDYD-DDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDS 221
Query: 127 NISVFTATADGGWDTTR------IDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLAS 180
+ V+ D D + H V +V+W GL +AS
Sbjct: 222 TVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWG-------FNGL--------IAS 266
Query: 181 CGCDNTVKVWKMYNGIWKMDCFPALQMHSDW-VRSVAWAPNLGLPKSTIASASQDGTVVI 239
G D + V++ +G WK+ AL H + + V W G K+ +A+ DG V
Sbjct: 267 VGADGVLAVYEEVDGEWKVFAKRAL-CHGVYEINVVKWLELNG--KTILATGGDDGIVNF 323
Query: 240 WTCAK 244
W+ K
Sbjct: 324 WSLEK 328
Score = 189 (71.6 bits), Expect = 6.8e-13, P = 6.8e-13
Identities = 73/257 (28%), Positives = 117/257 (45%)
Query: 48 LATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFND--HKSSV 105
+ +LK ++ +W ++ ILA+ S D ++ + +D+T ++ HK ++
Sbjct: 7 IKSLKLYKEKIWSFDFSQ----GILATGSTDRKIKLVSV-KYDDFTLIDVLDETAHKKAI 61
Query: 106 NSIAWAPHELGLSLACGSSDGNISVFTA--TADGGW--DTTRIDQAHPVGVTSVSWAPAM 161
S+AW PH L LA GS D +S++ +AD + D I + H V V+W+
Sbjct: 62 RSVAWRPHT-SL-LAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWS--- 116
Query: 162 APGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNL 221
+ LA+C D +V +W+ + +C LQ HS V+ V W P+
Sbjct: 117 -----------NDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSE 165
Query: 222 GLPKSTIASASQDGTVVIWTCAKEGEQWEG-RVLKDFKTPVWSVSWSLT-G--NLLAVAD 277
L +AS+S D TV IW + WE VL + VWS + T G L + +D
Sbjct: 166 AL----LASSSYDDTVRIWK--DYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSD 219
Query: 278 ANNVTLWKEAVDGEWQQ 294
+ V +WK D E Q
Sbjct: 220 DSTVRVWKYMGDDEDDQ 236
Score = 186 (70.5 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 85/296 (28%), Positives = 123/296 (41%)
Query: 7 ETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQH-----LATLKGHRGPVWQV 61
ET H+ + VA + LA S DS++ I SA + LA ++GH V V
Sbjct: 54 ETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGV 113
Query: 62 AWAHPKFGSILASCSYDGQVIIWK-EGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLA 120
AW++ G LA+CS D V IW+ + + ++ +H V + W P E LA
Sbjct: 114 AWSND--GYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEA--LLA 169
Query: 121 CGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLAS 180
S D + ++ D W+ + H V W+ + V +L S
Sbjct: 170 SSSYDDTVRIWK-DYDDDWECVAVLNGHEGTV----WSS--------DFDKTEGVFRLCS 216
Query: 181 CGCDNTVKVWKMYNGIWKMD-----CFPAL-QMHSDWVRSVAWAPNLGLPKSTIASASQD 234
D+TV+VWK Y G + D C L +H V +VAW N GL IAS D
Sbjct: 217 GSDDSTVRVWK-YMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFN-GL----IASVGAD 270
Query: 235 GTVVIWTCAKEGEQWE---GRVLKDFKTPVWSVSW-SLTGN-LLAVA-DANNVTLW 284
G + ++ +GE W+ R L + V W L G +LA D V W
Sbjct: 271 GVLAVYE-EVDGE-WKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFW 324
Score = 152 (58.6 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 56/189 (29%), Positives = 93/189 (49%)
Query: 119 LACGSSDGNISVFTATADGGWDTTRID----QAHPVGVTSVSWAPAMAPGALVGLGLLDP 174
LA GS+D I + + D D T ID AH + SV+W P +
Sbjct: 27 LATGSTDRKIKLVSVKYD---DFTLIDVLDETAHKKAIRSVAWRPHTS------------ 71
Query: 175 VQKLASCGCDNTVKVW---KMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASA 231
LA+ D+TV +W + + ++MD ++ H + V+ VAW+ N G +A+
Sbjct: 72 --LLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWS-NDGY---YLATC 125
Query: 232 SQDGTVVIWTCAKEGEQWEG-RVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVD 289
S+D +V IW + GE++E VL++ V V W + LLA + ++ V +WK+ D
Sbjct: 126 SRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKD-YD 184
Query: 290 GEWQQVSVV 298
+W+ V+V+
Sbjct: 185 DDWECVAVL 193
>ZFIN|ZDB-GENE-040426-839 [details] [associations]
symbol:ciao1 "cytosolic iron-sulfur protein
assembly 1 homolog (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0003674 "molecular_function" evidence=ND] [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-839 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BX323451 EMBL:BC044534 EMBL:BC065658
EMBL:BC171538 EMBL:BC171540 IPI:IPI00496663 RefSeq:NP_956441.2
UniGene:Dr.83731 ProteinModelPortal:Q6P0D9 STRING:Q6P0D9
PRIDE:Q6P0D9 Ensembl:ENSDART00000082256 GeneID:795104
KEGG:dre:795104 InParanoid:Q6P0D9 NextBio:20932107 Bgee:Q6P0D9
Uniprot:Q6P0D9
Length = 330
Score = 196 (74.1 bits), Expect = 8.7e-14, P = 8.7e-14
Identities = 79/289 (27%), Positives = 117/289 (40%)
Query: 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAH 65
+ GH+ TV VA GK LA+AS D++ I ++ + L L+GH V VAWA
Sbjct: 56 LSDGHQRTVRKVAWSPCGKYLASASFDATTCIWKKTDEDFECLTVLEGHENEVKCVAWA- 114
Query: 66 PKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAP-HELGLSLACGSS 124
P GS+LA+CS D V IW+ ++++ N H V + W P EL LA S
Sbjct: 115 PS-GSLLATCSRDKSVWIWEVDEEDEYECLSVVNSHTQDVKHVVWHPTQEL---LASASY 170
Query: 125 DGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCD 184
D I ++ D W+ + H V S+++ P A + K ++ G
Sbjct: 171 DNKICIYKEE-DDDWECRATLEGHESTVWSLTFDPEGRRLASCSDDRTVKIWKESTTGDG 229
Query: 185 NTVKVWKMYNGIWKMDCFPALQ-MHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC- 242
++ + WK C L H + +AW G + + DG V
Sbjct: 230 SSDESWK---------CICTLSGFHGRTIYDIAWCRLTG---ALATACGDDGVRVFSEDP 277
Query: 243 AKEGEQ----WEGRVLKDFKTPVWSVSWSL--TGNLLAVADANNVTLWK 285
+ EQ V K V VSW+ G L +D +WK
Sbjct: 278 TADPEQPIFALSAHVPKAHNQDVNCVSWNPKEAGLLATCSDNGEFAIWK 326
Score = 159 (61.0 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 43/127 (33%), Positives = 66/127 (51%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
LA+CG D +++W W+ C + H VR VAW+P G +ASAS D T
Sbjct: 31 LATCGGDRAIRIWGKEGDSWECKCVLS-DGHQRTVRKVAWSP-CG---KYLASASFDATT 85
Query: 238 VIWTCAKEGEQWEG-RVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGEWQQV 295
IW K E +E VL+ + V V+W+ +G+LLA + +V +W+ + E++ +
Sbjct: 86 CIWK--KTDEDFECLTVLEGHENEVKCVAWAPSGSLLATCSRDKSVWIWEVDEEDEYECL 143
Query: 296 SVVEPQT 302
SVV T
Sbjct: 144 SVVNSHT 150
Score = 157 (60.3 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 44/144 (30%), Positives = 69/144 (47%)
Query: 17 VAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLK-GHRGPVWQVAWAHPKFGSILASC 75
VA + G LAT D +I+I G + + L GH+ V +VAW+ P G LAS
Sbjct: 22 VAWNPAGTTLATCGGDRAIRIWGKEGDSWECKCVLSDGHQRTVRKVAWS-P-CGKYLASA 79
Query: 76 SYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATA 135
S+D IWK+ ++ D+ H++ V +AWAP G LA S D ++ ++
Sbjct: 80 SFDATTCIWKKTDE-DFECLTVLEGHENEVKCVAWAPS--GSLLATCSRDKSVWIWEVDE 136
Query: 136 DGGWDTTRIDQAHPVGVTSVSWAP 159
+ ++ + +H V V W P
Sbjct: 137 EDEYECLSVVNSHTQDVKHVVWHP 160
Score = 144 (55.7 bits), Expect = 2.7e-17, Sum P(2) = 2.7e-17
Identities = 36/116 (31%), Positives = 61/116 (52%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
LA+C D +V +W++ + +C + H+ V+ V W P L +ASAS D +
Sbjct: 120 LATCSRDKSVWIWEVDEED-EYECLSVVNSHTQDVKHVVWHPTQEL----LASASYDNKI 174
Query: 238 VIWTCAKEGEQWEGRV-LKDFKTPVWSVSWSLTGNLLA-VADANNVTLWKEAVDGE 291
I+ +E + WE R L+ ++ VWS+++ G LA +D V +WKE+ G+
Sbjct: 175 CIYK--EEDDDWECRATLEGHESTVWSLTFDPEGRRLASCSDDRTVKIWKESTTGD 228
Score = 137 (53.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 41/123 (33%), Positives = 62/123 (50%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
LAS D T +WK + +C L+ H + V+ VAWAP+ G S +A+ S+D +V
Sbjct: 76 LASASFDATTCIWKKTDE--DFECLTVLEGHENEVKCVAWAPS-G---SLLATCSRDKSV 129
Query: 238 VIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVS 296
IW +E E V+ V V W T LLA A +N + ++KE D +W+ +
Sbjct: 130 WIWEVDEEDEYECLSVVNSHTQDVKHVVWHPTQELLASASYDNKICIYKEE-DDDWECRA 188
Query: 297 VVE 299
+E
Sbjct: 189 TLE 191
Score = 131 (51.2 bits), Expect = 2.7e-17, Sum P(2) = 2.7e-17
Identities = 35/104 (33%), Positives = 53/104 (50%)
Query: 59 WQVAWAHPKFGSILASCSYDGQVIIW-KEGNQNDWTQAHTFND-HKSSVNSIAWAPHELG 116
W VAW +P G+ LA+C D + IW KEG+ W +D H+ +V +AW+P G
Sbjct: 20 WYVAW-NPA-GTTLATCGGDRAIRIWGKEGDS--WECKCVLSDGHQRTVRKVAWSP--CG 73
Query: 117 LSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPA 160
LA S D ++ T D ++ + + H V V+WAP+
Sbjct: 74 KYLASASFDATTCIWKKT-DEDFECLTVLEGHENEVKCVAWAPS 116
>UNIPROTKB|A7RWD2 [details] [associations]
symbol:v1g226592 "Probable cytosolic iron-sulfur protein
assembly protein" species:45351 "Nematostella vectensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS469546
RefSeq:XP_001636358.1 UniGene:Nve.10750 ProteinModelPortal:A7RWD2
STRING:A7RWD2 EnsemblMetazoa:NEMVEDRAFT_v1g226592-RA GeneID:5516269
KEGG:nve:NEMVE_v1g226592 Uniprot:A7RWD2
Length = 327
Score = 168 (64.2 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 45/127 (35%), Positives = 66/127 (51%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQM-HSDWVRSVAWAPNLGLPKSTIASASQDGT 236
LASCG D T+++W W C L+ H +RS+ W+P G + +ASAS D T
Sbjct: 20 LASCGGDKTIRIWGKEGDKWI--CKTILEDGHQRTIRSLGWSP-CG---TFLASASFDAT 73
Query: 237 VVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGEWQQV 295
IW K GE L+ + V SV WS++G+LLA + +V +W+ D E++
Sbjct: 74 TCIWD-QKSGEFECNATLEGHENEVKSVDWSVSGSLLATCGRDKSVWIWEVQEDDEYECA 132
Query: 296 SVVEPQT 302
SV+ T
Sbjct: 133 SVIHSHT 139
Score = 165 (63.1 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 75/288 (26%), Positives = 117/288 (40%)
Query: 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAH 65
+E GH+ T+ + G LA+AS D++ I + + ATL+GH V V W+
Sbjct: 45 LEDGHQRTIRSLGWSPCGTFLASASFDATTCIWDQKSGEFECNATLEGHENEVKSVDWSV 104
Query: 66 PKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD 125
GS+LA+C D V IW+ +++ A + H V + W P + L+ +C S D
Sbjct: 105 S--GSLLATCGRDKSVWIWEVQEDDEYECASVIHSHTQDVKKVVWHPTKEILA-SC-SYD 160
Query: 126 GNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDN 185
I ++ D W + H V S+S+ + + K G
Sbjct: 161 DTIKLYKEDEDD-WSCCDTLEGHESTVWSISFDGSGDRIVSCSDDKTVRIWKSYPPGNQE 219
Query: 186 TVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW---TC 242
V V + WK C + H + V W+ GL IA+AS D + I+ T
Sbjct: 220 GVVVSGKHTK-WKCVCVLS-GYHDRTIYDVHWSKVSGL----IATASGDDCIRIFKEDTN 273
Query: 243 AKEGE---QWEGRVLKDFKTPVWSVSWSLTG-NLLAV-ADANNVTLWK 285
+ + Q K V S+ W N+LA +D V LW+
Sbjct: 274 SDRNQPSFQLVATQRKAHSMDVNSICWHPKDENILATCSDDGTVKLWR 321
Score = 150 (57.9 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 43/153 (28%), Positives = 68/153 (44%)
Query: 8 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLK-GHRGPVWQVAWAHP 66
TGHED V VA G LA+ D +I+I G L+ GH+ + + W+ P
Sbjct: 2 TGHEDRVWSVAWSPNGFVLASCGGDKTIRIWGKEGDKWICKTILEDGHQRTIRSLGWS-P 60
Query: 67 KFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDG 126
G+ LAS S+D IW + ++ T H++ V S+ W+ L CG D
Sbjct: 61 -CGTFLASASFDATTCIWDQ-KSGEFECNATLEGHENEVKSVDWSVSG-SLLATCGR-DK 116
Query: 127 NISVFTATADGGWDTTRIDQAHPVGVTSVSWAP 159
++ ++ D ++ + +H V V W P
Sbjct: 117 SVWIWEVQEDDEYECASVIHSHTQDVKKVVWHP 149
Score = 138 (53.6 bits), Expect = 3.3e-17, Sum P(2) = 3.3e-17
Identities = 36/110 (32%), Positives = 54/110 (49%)
Query: 51 LKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIW-KEGNQNDWTQAHTFND-HKSSVNSI 108
+ GH VW VAW+ P G +LASC D + IW KEG++ W D H+ ++ S+
Sbjct: 1 MTGHEDRVWSVAWS-PN-GFVLASCGGDKTIRIWGKEGDK--WICKTILEDGHQRTIRSL 56
Query: 109 AWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWA 158
W+P G LA S D ++ + G ++ + H V SV W+
Sbjct: 57 GWSP--CGTFLASASFDATTCIWDQKS-GEFECNATLEGHENEVKSVDWS 103
Score = 137 (53.3 bits), Expect = 3.3e-17, Sum P(2) = 3.3e-17
Identities = 36/123 (29%), Positives = 63/123 (51%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
LA+CG D +V +W++ + +C + H+ V+ V W P K +AS S D T+
Sbjct: 109 LATCGRDKSVWIWEVQEDD-EYECASVIHSHTQDVKKVVWHPT----KEILASCSYDDTI 163
Query: 238 VIWTCAKEGEQ-WEG-RVLKDFKTPVWSVSWSLTGN-LLAVADANNVTLWKEAVDGEWQQ 294
++ KE E W L+ ++ VWS+S+ +G+ +++ +D V +WK G +
Sbjct: 164 KLY---KEDEDDWSCCDTLEGHESTVWSISFDGSGDRIVSCSDDKTVRIWKSYPPGNQEG 220
Query: 295 VSV 297
V V
Sbjct: 221 VVV 223
Score = 118 (46.6 bits), Expect = 0.00016, P = 0.00016
Identities = 34/95 (35%), Positives = 52/95 (54%)
Query: 208 HSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGR-VLKD-FKTPVWSVS 265
H D V SVAW+PN G +AS D T+ IW KEG++W + +L+D + + S+
Sbjct: 4 HEDRVWSVAWSPN-GF---VLASCGGDKTIRIW--GKEGDKWICKTILEDGHQRTIRSLG 57
Query: 266 WSLTGNLLAVADANNVT-LWKEAVDGEWQQVSVVE 299
WS G LA A + T +W + GE++ + +E
Sbjct: 58 WSPCGTFLASASFDATTCIWDQK-SGEFECNATLE 91
Score = 114 (45.2 bits), Expect = 0.00046, P = 0.00046
Identities = 36/124 (29%), Positives = 61/124 (49%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
LAS D T +W +G + +C L+ H + V+SV W+ + G S +A+ +D +V
Sbjct: 65 LASASFDATTCIWDQKSG--EFECNATLEGHENEVKSVDWSVS-G---SLLATCGRDKSV 118
Query: 238 VIWTCAKEGEQWE-GRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQV 295
IW +E +++E V+ V V W T +LA ++ + L+KE D +W
Sbjct: 119 WIWE-VQEDDEYECASVIHSHTQDVKKVVWHPTKEILASCSYDDTIKLYKEDED-DWSCC 176
Query: 296 SVVE 299
+E
Sbjct: 177 DTLE 180
>MGI|MGI:1346998 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10090 "Mus musculus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0007059 "chromosome segregation" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISO]
[GO:0071817 "MMXD complex" evidence=ISO] [GO:0097361 "CIA complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1346998 GO:GO:0007059 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0003700 GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HSSP:P16649
HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 ChiTaRS:CIAO1 EMBL:AK002314 EMBL:AK028376
EMBL:AL845368 EMBL:BC004089 IPI:IPI00320161 RefSeq:NP_079572.2
UniGene:Mm.45179 ProteinModelPortal:Q99KN2 SMR:Q99KN2 IntAct:Q99KN2
STRING:Q99KN2 PhosphoSite:Q99KN2 PaxDb:Q99KN2 PRIDE:Q99KN2
Ensembl:ENSMUST00000003759 GeneID:26371 KEGG:mmu:26371
UCSC:uc008mfb.2 InParanoid:Q99KN2 NextBio:304265 Bgee:Q99KN2
Genevestigator:Q99KN2 Uniprot:Q99KN2
Length = 339
Score = 178 (67.7 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 47/156 (30%), Positives = 75/156 (48%)
Query: 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAH 65
+ GH+ TV VA G LA+AS D++ I + + + TL+GH V VAWA
Sbjct: 56 LSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWA- 114
Query: 66 PKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAP-HELGLSLACGSS 124
P G++LA+CS D V +W+ ++++ + H V + W P EL LA S
Sbjct: 115 PS-GNLLATCSRDKSVWVWEVDEEDEYECVSVLSSHTQDVKHVVWHPSQEL---LASASY 170
Query: 125 DGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPA 160
D + ++ D W + H V S+++ P+
Sbjct: 171 DDTVKLYQEEGDD-WVCCATLEGHESTVWSIAFDPS 205
Score = 173 (66.0 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 68/239 (28%), Positives = 97/239 (40%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQH-LATLKGHRGPVWQVAWAHPK 67
GHE+ V VA G LAT S D S+ + + ++ L H V V W HP
Sbjct: 103 GHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLSSHTQDVKHVVW-HPS 161
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGN 127
+LAS SYD V +++E +DW T H+S+V SIA+ P G LA S D
Sbjct: 162 -QELLASASYDDTVKLYQEEG-DDWVCCATLEGHESTVWSIAFDPS--GQRLASCSDDRT 217
Query: 128 ISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLAS-CGCDNT 186
+ ++ G + P + + + LA+ CG D+
Sbjct: 218 VRIWRQYLPGNEQGVACSGSDP-SWKCICTLSGFHTRTIYDVAWCQLTGALATACG-DDA 275
Query: 187 VKVWKMYNGIWKMDCFPAL-----QMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW 240
++V++ G +L Q HS V VAW P +AS S DG V W
Sbjct: 276 IRVFEEDPGSDPQQPTFSLTAHLRQAHSQDVNCVAWNPK---EPGLLASCSDDGEVAFW 331
Score = 156 (60.0 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 45/128 (35%), Positives = 67/128 (52%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPAL-QMHSDWVRSVAWAPNLGLPKSTIASASQDGT 236
LASCG D +++W W C L + H VR VAW+P G + +ASAS D T
Sbjct: 31 LASCGGDRKIRIWGTEGDSWI--CKSVLSEGHQRTVRKVAWSP-CG---NYLASASFDAT 84
Query: 237 VVIWTCAKEGEQWEG-RVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGEWQQ 294
IW K + +E L+ + V SV+W+ +GNLLA + +V +W+ + E++
Sbjct: 85 TCIWK--KNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYEC 142
Query: 295 VSVVEPQT 302
VSV+ T
Sbjct: 143 VSVLSSHT 150
Score = 150 (57.9 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 63/207 (30%), Positives = 84/207 (40%)
Query: 8 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPK 67
+ H V V + LA+AS D ++K+ ATL+GH VW +A+ P
Sbjct: 147 SSHTQDVKHVVWHPSQELLASASYDDTVKLYQEEGDDWVCCATLEGHESTVWSIAF-DPS 205
Query: 68 FGSILASCSYDGQVIIWKE---GNQN---------DWTQAHTFND-HKSSVNSIAWAPHE 114
G LASCS D V IW++ GN+ W T + H ++ +AW
Sbjct: 206 -GQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHTRTIYDVAWCQLT 264
Query: 115 LGLSLACGSSDGNISVFTATADGGWD--------TTRIDQAHPVGVTSVSWAPAMAPGAL 166
L+ ACG D I VF D G D T + QAH V V+W P PG L
Sbjct: 265 GALATACG--DDAIRVFEE--DPGSDPQQPTFSLTAHLRQAHSQDVNCVAWNPK-EPGLL 319
Query: 167 VGLGLLDPVQKLASCGCDNTVKVWKMY 193
ASC D V W+ +
Sbjct: 320 ------------ASCSDDGEVAFWEYH 334
Score = 144 (55.7 bits), Expect = 6.3e-17, Sum P(2) = 6.3e-17
Identities = 38/121 (31%), Positives = 65/121 (53%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
LA+C D +V VW++ + +C L H+ V+ V W P+ L +ASAS D TV
Sbjct: 120 LATCSRDKSVWVWEVDEED-EYECVSVLSSHTQDVKHVVWHPSQEL----LASASYDDTV 174
Query: 238 VIWTCAKEGEQWEG-RVLKDFKTPVWSVSWSLTGNLLA-VADANNVTLWKEAVDGEWQQV 295
++ +EG+ W L+ ++ VWS+++ +G LA +D V +W++ + G Q V
Sbjct: 175 KLYQ--EEGDDWVCCATLEGHESTVWSIAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGV 232
Query: 296 S 296
+
Sbjct: 233 A 233
Score = 133 (51.9 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 52/185 (28%), Positives = 79/185 (42%)
Query: 116 GLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPV 175
G LA D I ++ D + + + H V V+W+P G
Sbjct: 28 GTLLASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPC---------G----- 73
Query: 176 QKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDG 235
LAS D T +WK +C L+ H + V+SVAWAP+ L +A+ S+D
Sbjct: 74 NYLASASFDATTCIWKKNQD--DFECVTTLEGHENEVKSVAWAPSGNL----LATCSRDK 127
Query: 236 TVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQ 294
+V +W +E E VL V V W + LLA A ++ V L++E D +W
Sbjct: 128 SVWVWEVDEEDEYECVSVLSSHTQDVKHVVWHPSQELLASASYDDTVKLYQEEGD-DWVC 186
Query: 295 VSVVE 299
+ +E
Sbjct: 187 CATLE 191
Score = 128 (50.1 bits), Expect = 6.3e-17, Sum P(2) = 6.3e-17
Identities = 34/104 (32%), Positives = 53/104 (50%)
Query: 59 WQVAWAHPKFGSILASCSYDGQVIIWKEGNQND-WTQAHTFND-HKSSVNSIAWAPHELG 116
W +AW +P G++LASC D ++ IW G + D W ++ H+ +V +AW+P G
Sbjct: 20 WFLAW-NPS-GTLLASCGGDRKIRIW--GTEGDSWICKSVLSEGHQRTVRKVAWSP--CG 73
Query: 117 LSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPA 160
LA S D ++ D T ++ H V SV+WAP+
Sbjct: 74 NYLASASFDATTCIWKKNQDDFECVTTLE-GHENEVKSVAWAPS 116
Score = 97 (39.2 bits), Expect = 9.1e-12, Sum P(2) = 9.1e-12
Identities = 40/136 (29%), Positives = 61/136 (44%)
Query: 174 PVQKL-ASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASAS 232
P Q+L AS D+TVK+++ W C L+ H V S+A+ P+ G +AS S
Sbjct: 160 PSQELLASASYDDTVKLYQEEGDDWV--CCATLEGHESTVWSIAFDPS-G---QRLASCS 213
Query: 233 QDGTVVIW-----------TCAKEGEQWEGR-VLKDFKT-PVWSVSW-SLTGNLLAVADA 278
D TV IW C+ W+ L F T ++ V+W LTG L
Sbjct: 214 DDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHTRTIYDVAWCQLTGALATACGD 273
Query: 279 NNVTLWKEAVDGEWQQ 294
+ + +++E + QQ
Sbjct: 274 DAIRVFEEDPGSDPQQ 289
>RGD|1307285 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10116 "Rattus norvegicus" [GO:0007059 "chromosome
segregation" evidence=IEA] [GO:0016226 "iron-sulfur cluster
assembly" evidence=ISO;ISS] [GO:0071817 "MMXD complex"
evidence=ISO;ISS] [GO:0097361 "CIA complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1307285 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
GO:GO:0071817 HSSP:P16649 HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BC088474 IPI:IPI00194647 RefSeq:NP_001008766.1
UniGene:Rn.108832 ProteinModelPortal:Q5M7T1 STRING:Q5M7T1
PRIDE:Q5M7T1 Ensembl:ENSRNOT00000017603 GeneID:29231 KEGG:rno:29231
UCSC:RGD:1307285 InParanoid:Q5M7T1 NextBio:608478
Genevestigator:Q5M7T1 Uniprot:Q5M7T1
Length = 339
Score = 183 (69.5 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 48/156 (30%), Positives = 75/156 (48%)
Query: 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAH 65
+ GH+ TV VA G LA+AS D++ I + + + TL+GH V VAWA
Sbjct: 56 LSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWA- 114
Query: 66 PKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAP-HELGLSLACGSS 124
P G++LA+CS D V +W+ ++++ N H V + W P EL LA S
Sbjct: 115 PS-GNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQEL---LASASY 170
Query: 125 DGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPA 160
D + ++ D W + H V S+++ P+
Sbjct: 171 DDTVKLYQEEGDD-WVCCATLEGHESTVWSIAFDPS 205
Score = 175 (66.7 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 71/240 (29%), Positives = 99/240 (41%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQH-LATLKGHRGPVWQVAWAHPK 67
GHE+ V VA G LAT S D S+ + + ++ L H V V W HP
Sbjct: 103 GHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVW-HPS 161
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGN 127
+LAS SYD V +++E +DW T H+S+V SIA+ P G LA S D
Sbjct: 162 -QELLASASYDDTVKLYQEEG-DDWVCCATLEGHESTVWSIAFDPS--GQRLASCSDDRT 217
Query: 128 ISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLAS-CGCDNT 186
+ ++ G + P V + + LA+ CG D+
Sbjct: 218 VRIWRQYLPGNEQGVACSGSDP-SWKCVCTLSGFHTRTIYDVAWCQLTGALATACG-DDA 275
Query: 187 VKVWKMYNGIWKMDCFPAL-----QMHSDWVRSVAWAPN-LGLPKSTIASASQDGTVVIW 240
++V++ G +L Q HS V VAW P GL +AS S DG V W
Sbjct: 276 IRVFEEDPGSDPQQPTFSLTAHLRQAHSQDVNCVAWNPKEAGL----LASCSDDGEVAFW 331
Score = 156 (60.0 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 45/128 (35%), Positives = 67/128 (52%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPAL-QMHSDWVRSVAWAPNLGLPKSTIASASQDGT 236
LASCG D +++W W C L + H VR VAW+P G + +ASAS D T
Sbjct: 31 LASCGGDRKIRIWGTEGDSWI--CKSVLSEGHQRTVRKVAWSP-CG---NYLASASFDAT 84
Query: 237 VVIWTCAKEGEQWEG-RVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGEWQQ 294
IW K + +E L+ + V SV+W+ +GNLLA + +V +W+ + E++
Sbjct: 85 TCIWK--KNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYEC 142
Query: 295 VSVVEPQT 302
VSV+ T
Sbjct: 143 VSVLNSHT 150
Score = 151 (58.2 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 64/205 (31%), Positives = 84/205 (40%)
Query: 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFG 69
H V V + LA+AS D ++K+ ATL+GH VW +A+ P G
Sbjct: 149 HTQDVKHVVWHPSQELLASASYDDTVKLYQEEGDDWVCCATLEGHESTVWSIAF-DPS-G 206
Query: 70 SILASCSYDGQVIIWKE---GNQN---------DWTQAHTFND-HKSSVNSIAWAPHELG 116
LASCS D V IW++ GN+ W T + H ++ +AW
Sbjct: 207 QRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCVCTLSGFHTRTIYDVAWCQLTGA 266
Query: 117 LSLACGSSDGNISVFTATADGGWD--------TTRIDQAHPVGVTSVSWAPAMAPGALVG 168
L+ ACG D I VF D G D T + QAH V V+W P A
Sbjct: 267 LATACG--DDAIRVFEE--DPGSDPQQPTFSLTAHLRQAHSQDVNCVAWNPKEA------ 316
Query: 169 LGLLDPVQKLASCGCDNTVKVWKMY 193
GLL ASC D V W+ +
Sbjct: 317 -GLL------ASCSDDGEVAFWEYH 334
Score = 144 (55.7 bits), Expect = 8.0e-17, Sum P(2) = 8.0e-17
Identities = 38/121 (31%), Positives = 65/121 (53%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
LA+C D +V VW++ + +C L H+ V+ V W P+ L +ASAS D TV
Sbjct: 120 LATCSRDKSVWVWEVDEED-EYECVSVLNSHTQDVKHVVWHPSQEL----LASASYDDTV 174
Query: 238 VIWTCAKEGEQWEG-RVLKDFKTPVWSVSWSLTGNLLA-VADANNVTLWKEAVDGEWQQV 295
++ +EG+ W L+ ++ VWS+++ +G LA +D V +W++ + G Q V
Sbjct: 175 KLYQ--EEGDDWVCCATLEGHESTVWSIAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGV 232
Query: 296 S 296
+
Sbjct: 233 A 233
Score = 134 (52.2 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 55/197 (27%), Positives = 84/197 (42%)
Query: 106 NSIAW--APHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAP 163
+S W A + G LA D I ++ D + + + H V V+W+P
Sbjct: 16 DSRCWFLAWNPTGTLLASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPC--- 72
Query: 164 GALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGL 223
G LAS D T +WK +C L+ H + V+SVAWAP+ L
Sbjct: 73 ------G-----NYLASASFDATTCIWKKNQD--DFECVTTLEGHENEVKSVAWAPSGNL 119
Query: 224 PKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VT 282
+A+ S+D +V +W +E E VL V V W + LLA A ++ V
Sbjct: 120 ----LATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVK 175
Query: 283 LWKEAVDGEWQQVSVVE 299
L++E D +W + +E
Sbjct: 176 LYQEEGD-DWVCCATLE 191
Score = 127 (49.8 bits), Expect = 8.0e-17, Sum P(2) = 8.0e-17
Identities = 34/104 (32%), Positives = 53/104 (50%)
Query: 59 WQVAWAHPKFGSILASCSYDGQVIIWKEGNQND-WTQAHTFND-HKSSVNSIAWAPHELG 116
W +AW +P G++LASC D ++ IW G + D W ++ H+ +V +AW+P G
Sbjct: 20 WFLAW-NPT-GTLLASCGGDRKIRIW--GTEGDSWICKSVLSEGHQRTVRKVAWSP--CG 73
Query: 117 LSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPA 160
LA S D ++ D T ++ H V SV+WAP+
Sbjct: 74 NYLASASFDATTCIWKKNQDDFECVTTLE-GHENEVKSVAWAPS 116
Score = 97 (39.2 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 40/136 (29%), Positives = 61/136 (44%)
Query: 174 PVQKL-ASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASAS 232
P Q+L AS D+TVK+++ W C L+ H V S+A+ P+ G +AS S
Sbjct: 160 PSQELLASASYDDTVKLYQEEGDDWV--CCATLEGHESTVWSIAFDPS-G---QRLASCS 213
Query: 233 QDGTVVIW-----------TCAKEGEQWEGR-VLKDFKT-PVWSVSW-SLTGNLLAVADA 278
D TV IW C+ W+ L F T ++ V+W LTG L
Sbjct: 214 DDRTVRIWRQYLPGNEQGVACSGSDPSWKCVCTLSGFHTRTIYDVAWCQLTGALATACGD 273
Query: 279 NNVTLWKEAVDGEWQQ 294
+ + +++E + QQ
Sbjct: 274 DAIRVFEEDPGSDPQQ 289
>UNIPROTKB|B4GDM7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7234 "Drosophila persimilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH479181 OrthoDB:EOG45DV4X RefSeq:XP_002015794.1
ProteinModelPortal:B4GDM7 GeneID:6591258 KEGG:dpe:Dper_GL10827
FlyBase:FBgn0148437 Uniprot:B4GDM7
Length = 335
Score = 215 (80.7 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 81/295 (27%), Positives = 133/295 (45%)
Query: 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAH 65
+ GH+ T+ ++ G+ LA+AS D++ I S+ + ATL+GH V V+W+
Sbjct: 54 LSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS- 112
Query: 66 PKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD 125
+ G +LA+CS D V IW+ +++ A N H V + W P + LA S D
Sbjct: 113 -RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPTKD--ILASASYD 169
Query: 126 GNISVFTATA-DGGWDTTRIDQAHPVGVTSVSWAPAMAPG-ALVGLGLLDPVQKLASC-- 181
I +F + D WD T +H V S+ + A G LV D K+
Sbjct: 170 NTIKMFAESQLDSDWDCTATLSSHTSTVWSIDFD---AEGDRLVSCSD-DKTLKIWRAYH 225
Query: 182 -GCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW 240
G D + + +WK C + Q HS + V+W GL IA+ D + I+
Sbjct: 226 PGNDAGIATPDKQS-VWKCVCTLSGQ-HSRAIYDVSWCKLTGL----IATGCGDDGIRIF 279
Query: 241 ---TCAKEGEQ-WEGRVLKD--FKTPVWSVSWS--LTGNLLAVADANNVTLWKEA 287
+ +K E +E ++ + V +V W+ + G L++ +D + +WK A
Sbjct: 280 KETSDSKRDEPTFEQLTAEETAHEQDVNAVEWNPAVAGQLISCSDDGTIKIWKVA 334
Score = 174 (66.3 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 38/110 (34%), Positives = 60/110 (54%)
Query: 50 TLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFND-HKSSVNSI 108
TL+GH+G +W VAW HPK G++ ASC D + +W N W+ +D HK ++ I
Sbjct: 9 TLQGHKGRIWGVAW-HPK-GNVFASCGEDKAIRVWSLSG-NTWSTKTILSDGHKRTIREI 65
Query: 109 AWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWA 158
W+P G LA S D ++++ ++ G ++ + H V SVSW+
Sbjct: 66 RWSP--CGQYLASASFDATTAIWSKSS-GEFECNATLEGHENEVKSVSWS 112
Score = 162 (62.1 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 71/293 (24%), Positives = 115/293 (39%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLS-NSASQHLATLKGHRGPVWQVAWAHPK 67
GH+ + VA G A+ D +I++ LS N+ S GH+ + ++ W+ P
Sbjct: 12 GHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLSGNTWSTKTILSDGHKRTIREIRWS-P- 69
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGN 127
G LAS S+D IW + + A T H++ V S++W+ GL C S D +
Sbjct: 70 CGQYLASASFDATTAIWSKSSGEFECNA-TLEGHENEVKSVSWS-RSGGLLATC-SRDKS 126
Query: 128 ISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDN-- 185
+ ++ D ++ + AH V V W P L + ++ A D+
Sbjct: 127 VWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPTK--DILASASYDNTIKMFAESQLDSDW 184
Query: 186 --TVKVWKMYNGIWKMDCFPA----LQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVI 239
T + + +W +D F A L SD W P + A+ D V
Sbjct: 185 DCTATLSSHTSTVWSID-FDAEGDRLVSCSDDKTLKIWRAYH--PGNDAGIATPDKQSV- 240
Query: 240 WTCAKEGEQWEGRVLKDFKTPVWSVSW-SLTGNLLAVADANNVTLWKEAVDGE 291
W C R + D VSW LTG + + + ++KE D +
Sbjct: 241 WKCVCTLSGQHSRAIYD-------VSWCKLTGLIATGCGDDGIRIFKETSDSK 286
Score = 159 (61.0 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 41/125 (32%), Positives = 61/125 (48%)
Query: 179 ASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVV 238
ASCG D ++VW + W + H +R + W+P G +ASAS D T
Sbjct: 30 ASCGEDKAIRVWSLSGNTWSTKTILS-DGHKRTIREIRWSP-CG---QYLASASFDATTA 84
Query: 239 IWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGEWQQVSV 297
IW+ GE L+ + V SVSWS +G LLA + +V +W+ A D E++ +V
Sbjct: 85 IWS-KSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAV 143
Query: 298 VEPQT 302
+ T
Sbjct: 144 LNAHT 148
>UNIPROTKB|B5X9P2 [details] [associations]
symbol:ciao1a "Probable cytosolic iron-sulfur protein
assembly protein ciao1-A" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT047761
ProteinModelPortal:B5X9P2 Uniprot:B5X9P2
Length = 330
Score = 184 (69.8 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 72/251 (28%), Positives = 105/251 (41%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQH-LATLKGHRGPVWQVAWAHPK 67
GHE+ V VA G +LAT S D S+ I + ++ + H V V W HP
Sbjct: 103 GHENEVKCVAWAPSGNQLATCSRDKSVWIWEVDEEDEYECVSVVNSHTQDVKHVVW-HPT 161
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGN 127
+LASCSYD V ++KE +DW T H S+V + + P G LA S D
Sbjct: 162 -QELLASCSYDNNVCVYKE-EDDDWECRATLEGHTSTVWGLTFDPS--GQRLASCSDDRT 217
Query: 128 ISVFT-ATADGGWDTT-----RIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASC 181
+ ++ GG DT + H V ++W P GAL +C
Sbjct: 218 VKIWKECQPGGGQDTAWKCVCTLSGFHGRTVYDIAWCPLT--GALA-----------TAC 264
Query: 182 GCDNTVKVWKMYNG------IWKMDCFPALQMHSDWVRSVAWAPN-LGLPKSTIASASQD 234
G D+ V+V+K ++ + + HS V +AW P GL + S S +
Sbjct: 265 G-DDGVRVFKEDETADPDQPVFSLSAHVP-KAHSQDVNCIAWHPKEAGL----LVSCSDN 318
Query: 235 GTVVIWTCAKE 245
G + +W E
Sbjct: 319 GEIAVWNYQSE 329
Score = 180 (68.4 bits), Expect = 9.3e-12, P = 9.3e-12
Identities = 65/222 (29%), Positives = 92/222 (41%)
Query: 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAH 65
++ GH+ V VA G LA+AS D++ I N + L L+GH V VAWA
Sbjct: 56 LQDGHQRAVRKVAWSPCGNYLASASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWA- 114
Query: 66 PKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD 125
P G+ LA+CS D V IW+ ++++ N H V + W P + L +C S D
Sbjct: 115 PS-GNQLATCSRDKSVWIWEVDEEDEYECVSVVNSHTQDVKHVVWHPTQ-ELLASC-SYD 171
Query: 126 GNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAP-GALVGLGLLDPVQKL-ASC-- 181
N+ V+ D W+ + H TS W P G + D K+ C
Sbjct: 172 NNVCVYKEE-DDDWECRATLEGH----TSTVWGLTFDPSGQRLASCSDDRTVKIWKECQP 226
Query: 182 -GCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLG 222
G +T WK C + H V +AW P G
Sbjct: 227 GGGQDTA---------WKCVCTLS-GFHGRTVYDIAWCPLTG 258
Score = 164 (62.8 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 46/128 (35%), Positives = 68/128 (53%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQM-HSDWVRSVAWAPNLGLPKSTIASASQDGT 236
LASCG D +++W W +C LQ H VR VAW+P G + +ASAS D T
Sbjct: 31 LASCGGDRAIRIWGREGDSW--ECKTVLQDGHQRAVRKVAWSP-CG---NYLASASFDAT 84
Query: 237 VVIWTCAKEGEQWEG-RVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGEWQQ 294
IW K+ + +E VL+ + V V+W+ +GN LA + +V +W+ + E++
Sbjct: 85 TCIWK--KKNDDFECLTVLEGHENEVKCVAWAPSGNQLATCSRDKSVWIWEVDEEDEYEC 142
Query: 295 VSVVEPQT 302
VSVV T
Sbjct: 143 VSVVNSHT 150
Score = 157 (60.3 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 57/174 (32%), Positives = 79/174 (45%)
Query: 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAH 65
+ H V V + LA+ S D+++ + + + ATL+GH VW + +
Sbjct: 145 VVNSHTQDVKHVVWHPTQELLASCSYDNNVCVYKEEDDDWECRATLEGHTSTVWGLTF-D 203
Query: 66 PKFGSILASCSYDGQVIIWKE----GNQND-WTQAHTFND-HKSSVNSIAWAPHELGLSL 119
P G LASCS D V IWKE G Q+ W T + H +V IAW P L+
Sbjct: 204 PS-GQRLASCSDDRTVKIWKECQPGGGQDTAWKCVCTLSGFHGRTVYDIAWCPLTGALAT 262
Query: 120 ACGSSDGNISVFTA--TADGGWD----TTRIDQAHPVGVTSVSWAPAMAPGALV 167
ACG DG + VF TAD + + +AH V ++W P A G LV
Sbjct: 263 ACGD-DG-VRVFKEDETADPDQPVFSLSAHVPKAHSQDVNCIAWHPKEA-GLLV 313
Score = 145 (56.1 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 43/126 (34%), Positives = 62/126 (49%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
LAS D T +WK N +C L+ H + V+ VAWAP+ G + +A+ S+D +V
Sbjct: 76 LASASFDATTCIWKKKND--DFECLTVLEGHENEVKCVAWAPS-G---NQLATCSRDKSV 129
Query: 238 VIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADA-NNVTLWKEAVDGEWQQVS 296
IW +E E V+ V V W T LLA NNV ++KE D +W+ +
Sbjct: 130 WIWEVDEEDEYECVSVVNSHTQDVKHVVWHPTQELLASCSYDNNVCVYKEE-DDDWECRA 188
Query: 297 VVEPQT 302
+E T
Sbjct: 189 TLEGHT 194
Score = 134 (52.2 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 35/122 (28%), Positives = 60/122 (49%)
Query: 177 KLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGT 236
+LA+C D +V +W++ + +C + H+ V+ V W P L +AS S D
Sbjct: 119 QLATCSRDKSVWIWEVDEED-EYECVSVVNSHTQDVKHVVWHPTQEL----LASCSYDNN 173
Query: 237 VVIWTCAKEGEQWEGRV-LKDFKTPVWSVSWSLTGNLLA-VADANNVTLWKEAVDGEWQQ 294
V ++ +E + WE R L+ + VW +++ +G LA +D V +WKE G Q
Sbjct: 174 VCVYK--EEDDDWECRATLEGHTSTVWGLTFDPSGQRLASCSDDRTVKIWKECQPGGGQD 231
Query: 295 VS 296
+
Sbjct: 232 TA 233
Score = 133 (51.9 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 35/104 (33%), Positives = 52/104 (50%)
Query: 59 WQVAWAHPKFGSILASCSYDGQVIIWKEGNQND-WTQAHTFND-HKSSVNSIAWAPHELG 116
W VAW +PK G++LASC D + IW G + D W D H+ +V +AW+P G
Sbjct: 20 WYVAW-NPK-GTLLASCGGDRAIRIW--GREGDSWECKTVLQDGHQRAVRKVAWSP--CG 73
Query: 117 LSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPA 160
LA S D ++ D ++ + + H V V+WAP+
Sbjct: 74 NYLASASFDATTCIWKKKNDD-FECLTVLEGHENEVKCVAWAPS 116
Score = 114 (45.2 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 41/121 (33%), Positives = 58/121 (47%)
Query: 174 PVQKL-ASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASAS 232
P Q+L ASC DN V V+K + W +C L+ H+ V + + P+ G +AS S
Sbjct: 160 PTQELLASCSYDNNVCVYKEEDDDW--ECRATLEGHTSTVWGLTFDPS-G---QRLASCS 213
Query: 233 QDGTVVIWT-CAKEGEQ---WEGR-VLKDFK-TPVWSVSWS-LTGNLLAVADANNVTLWK 285
D TV IW C G Q W+ L F V+ ++W LTG L + V ++K
Sbjct: 214 DDRTVKIWKECQPGGGQDTAWKCVCTLSGFHGRTVYDIAWCPLTGALATACGDDGVRVFK 273
Query: 286 E 286
E
Sbjct: 274 E 274
>UNIPROTKB|Q292E8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:46245 "Drosophila pseudoobscura
pseudoobscura" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000071 GenomeReviews:CM000071_GR OMA:SWKCVCT
OrthoDB:EOG45DV4X HSSP:P63005 RefSeq:XP_001360339.1
ProteinModelPortal:Q292E8 GeneID:4803656 KEGG:dpo:Dpse_GA11817
FlyBase:FBgn0071866 InParanoid:Q292E8 Uniprot:Q292E8
Length = 335
Score = 213 (80.0 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 80/293 (27%), Positives = 132/293 (45%)
Query: 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAH 65
+ GH+ T+ ++ G+ LA+AS D++ I S+ + ATL+GH V V+W+
Sbjct: 54 LSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS- 112
Query: 66 PKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD 125
+ G +LA+CS D V IW+ +++ A N H V + W P + LA S D
Sbjct: 113 -RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPTKD--ILASASYD 169
Query: 126 GNISVFTATA-DGGWDTTRIDQAHPVGVTSVSWAPAMAPG-ALVGLGLLDPVQKLASC-- 181
I +F + D WD T +H V S+ + A G LV D K+
Sbjct: 170 NTIKMFAESQLDSDWDCTATLSSHTSTVWSIDFD---AEGDRLVSCSD-DKTLKIWRAYH 225
Query: 182 -GCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW 240
G D + + +WK C + Q HS + V+W GL IA+ D + I+
Sbjct: 226 PGNDAGIATPDKQS-VWKCVCTLSGQ-HSRAIYDVSWCKLTGL----IATGCGDDGIRIF 279
Query: 241 ---TCAKEGEQ-WEGRVLKD--FKTPVWSVSWS--LTGNLLAVADANNVTLWK 285
+ +K E +E ++ + V +V W+ + G L++ +D + +WK
Sbjct: 280 KETSDSKRDEPTFEQLTAEETAHEQDVNAVEWNPAVAGQLISCSDDGTIKIWK 332
Score = 174 (66.3 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 38/110 (34%), Positives = 60/110 (54%)
Query: 50 TLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFND-HKSSVNSI 108
TL+GH+G +W VAW HPK G++ ASC D + +W N W+ +D HK ++ I
Sbjct: 9 TLQGHKGRIWGVAW-HPK-GNVFASCGEDKAIRVWSLSG-NTWSTKTILSDGHKRTIREI 65
Query: 109 AWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWA 158
W+P G LA S D ++++ ++ G ++ + H V SVSW+
Sbjct: 66 RWSP--CGQYLASASFDATTAIWSKSS-GEFECNATLEGHENEVKSVSWS 112
Score = 162 (62.1 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 71/293 (24%), Positives = 115/293 (39%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLS-NSASQHLATLKGHRGPVWQVAWAHPK 67
GH+ + VA G A+ D +I++ LS N+ S GH+ + ++ W+ P
Sbjct: 12 GHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLSGNTWSTKTILSDGHKRTIREIRWS-P- 69
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGN 127
G LAS S+D IW + + A T H++ V S++W+ GL C S D +
Sbjct: 70 CGQYLASASFDATTAIWSKSSGEFECNA-TLEGHENEVKSVSWS-RSGGLLATC-SRDKS 126
Query: 128 ISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDN-- 185
+ ++ D ++ + AH V V W P L + ++ A D+
Sbjct: 127 VWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPTK--DILASASYDNTIKMFAESQLDSDW 184
Query: 186 --TVKVWKMYNGIWKMDCFPA----LQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVI 239
T + + +W +D F A L SD W P + A+ D V
Sbjct: 185 DCTATLSSHTSTVWSID-FDAEGDRLVSCSDDKTLKIWRAYH--PGNDAGIATPDKQSV- 240
Query: 240 WTCAKEGEQWEGRVLKDFKTPVWSVSW-SLTGNLLAVADANNVTLWKEAVDGE 291
W C R + D VSW LTG + + + ++KE D +
Sbjct: 241 WKCVCTLSGQHSRAIYD-------VSWCKLTGLIATGCGDDGIRIFKETSDSK 286
Score = 159 (61.0 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 41/125 (32%), Positives = 61/125 (48%)
Query: 179 ASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVV 238
ASCG D ++VW + W + H +R + W+P G +ASAS D T
Sbjct: 30 ASCGEDKAIRVWSLSGNTWSTKTILS-DGHKRTIREIRWSP-CG---QYLASASFDATTA 84
Query: 239 IWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGEWQQVSV 297
IW+ GE L+ + V SVSWS +G LLA + +V +W+ A D E++ +V
Sbjct: 85 IWS-KSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAV 143
Query: 298 VEPQT 302
+ T
Sbjct: 144 LNAHT 148
Score = 153 (58.9 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 58/188 (30%), Positives = 82/188 (43%)
Query: 26 LATASSDSSIKIIGLSNSASQH--LATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVII 83
LA+AS D++IK+ S S ATL H VW + + G L SCS D + I
Sbjct: 163 LASASYDNTIKMFAESQLDSDWDCTATLSSHTSTVWSIDFDAE--GDRLVSCSDDKTLKI 220
Query: 84 WKE---GN---------QNDWTQAHTFN-DHKSSVNSIAWAPHELGLSLACGSSDGNISV 130
W+ GN Q+ W T + H ++ ++W GL +A G D I +
Sbjct: 221 WRAYHPGNDAGIATPDKQSVWKCVCTLSGQHSRAIYDVSWCKLT-GL-IATGCGDDGIRI 278
Query: 131 FTATADGGWDTTRIDQ------AHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCD 184
F T+D D +Q AH V +V W PA+A G L+ SC D
Sbjct: 279 FKETSDSKRDEPTFEQLTAEETAHEQDVNAVEWNPAVA-GQLI------------SCSDD 325
Query: 185 NTVKVWKM 192
T+K+WK+
Sbjct: 326 GTIKIWKV 333
>UNIPROTKB|B3MC74 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7217 "Drosophila ananassae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH902619 OrthoDB:EOG45DV4X RefSeq:XP_001959352.1
ProteinModelPortal:B3MC74 STRING:B3MC74 EnsemblMetazoa:FBtr0116785
GeneID:6494943 KEGG:dan:Dana_GF12085 FlyBase:FBgn0089124
InParanoid:B3MC74 Uniprot:B3MC74
Length = 335
Score = 211 (79.3 bits), Expect = 7.0e-16, P = 7.0e-16
Identities = 82/293 (27%), Positives = 128/293 (43%)
Query: 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAH 65
+ GH+ T+ ++ G+ LA+AS D + I S+ + ATL+GH V V+W+
Sbjct: 54 LSDGHKRTIREIRWSPCGQYLASASFDGTTAIWSKSSGEFECNATLEGHENEVKSVSWS- 112
Query: 66 PKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAP-HELGLSLACGSS 124
+ G +LA+CS D V IW+ +++ A N H V + W P EL LA S
Sbjct: 113 -RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKEL---LASASY 168
Query: 125 DGNISVFTATA-DGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASC-- 181
D I +F A D WD +H V S+ + A G + D K+
Sbjct: 169 DNTIKMFAEDALDSDWDCVATLSSHTSTVWSIDFD---ATGERLVSCSDDTSLKIWQAYH 225
Query: 182 -GCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW 240
G D V +WK C + Q HS + V+W L IA+A D + I+
Sbjct: 226 PGNDAGVATPDKQT-VWKCVCTISGQ-HSRAIYDVSWCKLTNL----IATACGDDGIRIF 279
Query: 241 ---TCAKEGEQ-WEGRVLKD--FKTPVWSVSWS--LTGNLLAVADANNVTLWK 285
+ +K E +E ++ V SV W+ + G L++ +D + +WK
Sbjct: 280 KETSDSKRDEPTFEQLTAEEGAHDQDVNSVEWNPVVEGQLISCSDDGTIKVWK 332
Score = 189 (71.6 bits), Expect = 7.3e-13, P = 7.3e-13
Identities = 42/110 (38%), Positives = 62/110 (56%)
Query: 50 TLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFND-HKSSVNSI 108
TL+GH+G +W VAW HPK G++ ASC D + IW N N WT +D HK ++ I
Sbjct: 9 TLQGHKGRIWGVAW-HPK-GNVFASCGEDKAIRIWSL-NGNTWTTKTILSDGHKRTIREI 65
Query: 109 AWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWA 158
W+P G LA S DG ++++ ++ G ++ + H V SVSW+
Sbjct: 66 RWSP--CGQYLASASFDGTTAIWSKSS-GEFECNATLEGHENEVKSVSWS 112
Score = 171 (65.3 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 42/125 (33%), Positives = 63/125 (50%)
Query: 179 ASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVV 238
ASCG D +++W + W + H +R + W+P G +ASAS DGT
Sbjct: 30 ASCGEDKAIRIWSLNGNTWTTKTILS-DGHKRTIREIRWSP-CG---QYLASASFDGTTA 84
Query: 239 IWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGEWQQVSV 297
IW+ GE L+ + V SVSWS +G LLA + +V +W+ A D E++ +V
Sbjct: 85 IWS-KSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAV 143
Query: 298 VEPQT 302
+ P T
Sbjct: 144 LNPHT 148
Score = 164 (62.8 bits), Expect = 8.2e-10, P = 8.2e-10
Identities = 71/293 (24%), Positives = 116/293 (39%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLS-NSASQHLATLKGHRGPVWQVAWAHPK 67
GH+ + VA G A+ D +I+I L+ N+ + GH+ + ++ W+ P
Sbjct: 12 GHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLNGNTWTTKTILSDGHKRTIREIRWS-P- 69
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGN 127
G LAS S+DG IW + + A T H++ V S++W+ GL C S D +
Sbjct: 70 CGQYLASASFDGTTAIWSKSSGEFECNA-TLEGHENEVKSVSWS-RSGGLLATC-SRDKS 126
Query: 128 ISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNT- 186
+ ++ D ++ + H V V W P L + ++ A D+
Sbjct: 127 VWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKE--LLASASYDNTIKMFAEDALDSDW 184
Query: 187 --VKVWKMYNG-IWKMDCFPA----LQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVI 239
V + +W +D F A L SD W P + A+ D V
Sbjct: 185 DCVATLSSHTSTVWSID-FDATGERLVSCSDDTSLKIWQAYH--PGNDAGVATPDKQTV- 240
Query: 240 WTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGE 291
W C R + D VSW NL+A A ++ + ++KE D +
Sbjct: 241 WKCVCTISGQHSRAIYD-------VSWCKLTNLIATACGDDGIRIFKETSDSK 286
Score = 150 (57.9 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 58/188 (30%), Positives = 81/188 (43%)
Query: 26 LATASSDSSIKIIGLS--NSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVII 83
LA+AS D++IK+ +S +ATL H VW + + G L SCS D + I
Sbjct: 163 LASASYDNTIKMFAEDALDSDWDCVATLSSHTSTVWSIDF--DATGERLVSCSDDTSLKI 220
Query: 84 WKE---GN---------QNDWTQAHTFN-DHKSSVNSIAWAPHELGLSLACGSSDGNISV 130
W+ GN Q W T + H ++ ++W ++ ACG DG I +
Sbjct: 221 WQAYHPGNDAGVATPDKQTVWKCVCTISGQHSRAIYDVSWCKLTNLIATACGD-DG-IRI 278
Query: 131 FTATADGGWDTTRIDQ------AHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCD 184
F T+D D +Q AH V SV W P + G L+ SC D
Sbjct: 279 FKETSDSKRDEPTFEQLTAEEGAHDQDVNSVEWNPVVE-GQLI------------SCSDD 325
Query: 185 NTVKVWKM 192
T+KVWKM
Sbjct: 326 GTIKVWKM 333
Score = 148 (57.2 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 42/129 (32%), Positives = 65/129 (50%)
Query: 176 QKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDG 235
Q LAS D T +W +G + +C L+ H + V+SV+W+ + GL +A+ S+D
Sbjct: 72 QYLASASFDGTTAIWSKSSG--EFECNATLEGHENEVKSVSWSRSGGL----LATCSRDK 125
Query: 236 TVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKE-AVDGEWQ 293
+V IW A + E VL V V W T LLA A +N + ++ E A+D +W
Sbjct: 126 SVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKELLASASYDNTIKMFAEDALDSDWD 185
Query: 294 QVSVVEPQT 302
V+ + T
Sbjct: 186 CVATLSSHT 194
>UNIPROTKB|O76071 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9606 "Homo sapiens" [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0016226 "iron-sulfur
cluster assembly" evidence=IGI] [GO:0071817 "MMXD complex"
evidence=IDA] [GO:0097361 "CIA complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319
GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HOGENOM:HOG000208901
OMA:SWKCVCT CTD:9391 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:U63810 EMBL:EF011618 EMBL:AC004020 EMBL:CR456802
EMBL:AK223257 EMBL:BC001395 EMBL:BC032812 IPI:IPI00008791
RefSeq:NP_004795.1 UniGene:Hs.12109 PDB:3FM0 PDBsum:3FM0
ProteinModelPortal:O76071 SMR:O76071 IntAct:O76071
MINT:MINT-1416717 STRING:O76071 PhosphoSite:O76071 PaxDb:O76071
PeptideAtlas:O76071 PRIDE:O76071 DNASU:9391 Ensembl:ENST00000488633
GeneID:9391 KEGG:hsa:9391 UCSC:uc002svs.3 GeneCards:GC02P096931
HGNC:HGNC:14280 HPA:HPA017882 MIM:604333 neXtProt:NX_O76071
PharmGKB:PA162382269 InParanoid:O76071 PhylomeDB:O76071
ChiTaRS:CIAO1 EvolutionaryTrace:O76071 GenomeRNAi:9391
NextBio:35187 Bgee:O76071 CleanEx:HS_CIAO1 Genevestigator:O76071
GermOnline:ENSG00000144021 Uniprot:O76071
Length = 339
Score = 180 (68.4 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 48/156 (30%), Positives = 75/156 (48%)
Query: 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAH 65
+ GH+ TV VA G LA+AS D++ I + + + TL+GH V VAWA
Sbjct: 56 LSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWA- 114
Query: 66 PKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAP-HELGLSLACGSS 124
P G++LA+CS D V +W+ ++++ N H V + W P EL LA S
Sbjct: 115 PS-GNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQEL---LASASY 170
Query: 125 DGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPA 160
D + ++ D W + H V S+++ P+
Sbjct: 171 DDTVKLYREEEDD-WVCCATLEGHESTVWSLAFDPS 205
Score = 178 (67.7 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 67/239 (28%), Positives = 98/239 (41%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQH-LATLKGHRGPVWQVAWAHPK 67
GHE+ V VA G LAT S D S+ + + ++ L H V V W HP
Sbjct: 103 GHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVW-HPS 161
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGN 127
+LAS SYD V +++E ++DW T H+S+V S+A+ P G LA S D
Sbjct: 162 -QELLASASYDDTVKLYRE-EEDDWVCCATLEGHESTVWSLAFDPS--GQRLASCSDDRT 217
Query: 128 ISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLAS-CGCDNT 186
+ ++ G + P + + + LA+ CG D+
Sbjct: 218 VRIWRQYLPGNEQGVACSGSDP-SWKCICTLSGFHSRTIYDIAWCQLTGALATACG-DDA 275
Query: 187 VKVWKMY-NGIWKMDCFPAL----QMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW 240
++V++ N + F Q HS V VAW P +AS S DG V W
Sbjct: 276 IRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPK---EPGLLASCSDDGEVAFW 331
Score = 156 (60.0 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 45/128 (35%), Positives = 67/128 (52%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPAL-QMHSDWVRSVAWAPNLGLPKSTIASASQDGT 236
LASCG D +++W W C L + H VR VAW+P G + +ASAS D T
Sbjct: 31 LASCGGDRRIRIWGTEGDSWI--CKSVLSEGHQRTVRKVAWSP-CG---NYLASASFDAT 84
Query: 237 VVIWTCAKEGEQWEG-RVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGEWQQ 294
IW K + +E L+ + V SV+W+ +GNLLA + +V +W+ + E++
Sbjct: 85 TCIWK--KNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYEC 142
Query: 295 VSVVEPQT 302
VSV+ T
Sbjct: 143 VSVLNSHT 150
Score = 149 (57.5 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 62/201 (30%), Positives = 80/201 (39%)
Query: 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFG 69
H V V + LA+AS D ++K+ ATL+GH VW +A+ P G
Sbjct: 149 HTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAF-DPS-G 206
Query: 70 SILASCSYDGQVIIWKE---GNQN---------DWTQAHTFND-HKSSVNSIAWAPHELG 116
LASCS D V IW++ GN+ W T + H ++ IAW
Sbjct: 207 QRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGA 266
Query: 117 LSLACGSSDGNISVFTATADGGWD------TTRIDQAHPVGVTSVSWAPAMAPGALVGLG 170
L+ ACG D I VF + T + QAH V V+W P PG L
Sbjct: 267 LATACG--DDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPK-EPGLL---- 319
Query: 171 LLDPVQKLASCGCDNTVKVWK 191
ASC D V WK
Sbjct: 320 --------ASCSDDGEVAFWK 332
Score = 136 (52.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 55/197 (27%), Positives = 84/197 (42%)
Query: 106 NSIAW--APHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAP 163
+S W A + G LA D I ++ D + + + H V V+W+P
Sbjct: 16 DSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPC--- 72
Query: 164 GALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGL 223
G LAS D T +WK +C L+ H + V+SVAWAP+ L
Sbjct: 73 ------G-----NYLASASFDATTCIWKKNQD--DFECVTTLEGHENEVKSVAWAPSGNL 119
Query: 224 PKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VT 282
+A+ S+D +V +W +E E VL V V W + LLA A ++ V
Sbjct: 120 ----LATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVK 175
Query: 283 LWKEAVDGEWQQVSVVE 299
L++E D +W + +E
Sbjct: 176 LYREEED-DWVCCATLE 191
Score = 134 (52.2 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 37/121 (30%), Positives = 64/121 (52%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
LA+C D +V VW++ + +C L H+ V+ V W P+ L +ASAS D TV
Sbjct: 120 LATCSRDKSVWVWEVDEED-EYECVSVLNSHTQDVKHVVWHPSQEL----LASASYDDTV 174
Query: 238 VIWTCAKEGEQWEG-RVLKDFKTPVWSVSWSLTGNLLA-VADANNVTLWKEAVDGEWQQV 295
++ +E + W L+ ++ VWS+++ +G LA +D V +W++ + G Q V
Sbjct: 175 KLYR--EEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGV 232
Query: 296 S 296
+
Sbjct: 233 A 233
Score = 127 (49.8 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 34/104 (32%), Positives = 53/104 (50%)
Query: 59 WQVAWAHPKFGSILASCSYDGQVIIWKEGNQND-WTQAHTFND-HKSSVNSIAWAPHELG 116
W +AW +P G++LASC D ++ IW G + D W ++ H+ +V +AW+P G
Sbjct: 20 WFLAW-NPA-GTLLASCGGDRRIRIW--GTEGDSWICKSVLSEGHQRTVRKVAWSP--CG 73
Query: 117 LSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPA 160
LA S D ++ D T ++ H V SV+WAP+
Sbjct: 74 NYLASASFDATTCIWKKNQDDFECVTTLE-GHENEVKSVAWAPS 116
Score = 93 (37.8 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 38/136 (27%), Positives = 62/136 (45%)
Query: 174 PVQKL-ASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASAS 232
P Q+L AS D+TVK+++ W C L+ H V S+A+ P+ G +AS S
Sbjct: 160 PSQELLASASYDDTVKLYREEEDDWV--CCATLEGHESTVWSLAFDPS-G---QRLASCS 213
Query: 233 QDGTVVIW-----------TCAKEGEQWEGR-VLKDFKT-PVWSVSW-SLTGNLLAVADA 278
D TV IW C+ W+ L F + ++ ++W LTG L
Sbjct: 214 DDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGD 273
Query: 279 NNVTLWKEAVDGEWQQ 294
+ + +++E + + QQ
Sbjct: 274 DAIRVFQEDPNSDPQQ 289
>UNIPROTKB|Q5DFU0 [details] [associations]
symbol:Q5DFU0 "Probable cytosolic iron-sulfur protein
assembly protein" species:6182 "Schistosoma japonicum" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:AY813584
ProteinModelPortal:Q5DFU0 STRING:Q5DFU0 Uniprot:Q5DFU0
Length = 352
Score = 210 (79.0 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 68/248 (27%), Positives = 115/248 (46%)
Query: 51 LKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFND-HKSSVNSIA 109
LK +W ++W H GS+L S D + +W + N W + + + HK S+ +
Sbjct: 10 LKASNKRLWSLSWNHK--GSVLISSGEDRVIKLWAKCNDQLWGSSFSLPEAHKKSIRCVT 67
Query: 110 WAPHELGLSLACGSSDGNISVFTAT-ADGGWDTTRID--QAHPVGVTSVSWAPAMAPGAL 166
W+P G +A S DG ++++ + A + + + H V V+W P+ G L
Sbjct: 68 WSP--CGTYIASASFDGTVTIWKISEAHSAPEMEALVSLEGHTSEVKCVAWCPS---GHL 122
Query: 167 VGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKS 226
+ A+CG D +V +W+ ++ + C LQ HS V+SVAW P+ G
Sbjct: 123 I-----------ATCGRDKSVWLWE-FDDEEDVQCVSVLQPHSQDVKSVAWHPH-G---E 166
Query: 227 TIASASQDGTVVIWTCAKEGEQWEGRV-LKDFKTPVWSVSWSLTGNLLA-VADANNVTLW 284
+ S S D + ++ +E + W L + VW +S +G++LA +D V LW
Sbjct: 167 VLVSTSYDNKINVYR--EELDDWTVFAQLSGHDSTVWKAEFSPSGDILASCSDDLCVKLW 224
Query: 285 K-EAVDGE 291
E V G+
Sbjct: 225 SWEGVCGK 232
Score = 153 (58.9 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 44/155 (28%), Positives = 69/155 (44%)
Query: 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSAS----QHLATLKGHRGPVWQVAWAH 65
H+ ++ V G +A+AS D ++ I +S + S + L +L+GH V VAW
Sbjct: 59 HKKSIRCVTWSPCGTYIASASFDGTVTIWKISEAHSAPEMEALVSLEGHTSEVKCVAWC- 117
Query: 66 PKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD 125
P G ++A+C D V +W+ ++ D H V S+AW PH G L S D
Sbjct: 118 PS-GHLIATCGRDKSVWLWEFDDEEDVQCVSVLQPHSQDVKSVAWHPH--GEVLVSTSYD 174
Query: 126 GNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPA 160
I+V+ D W H V ++P+
Sbjct: 175 NKINVYREELDD-WTVFAQLSGHDSTVWKAEFSPS 208
Score = 151 (58.2 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 63/224 (28%), Positives = 98/224 (43%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSAS-QHLATLKGHRGPVWQVAWAHPK 67
GH V VA G +AT D S+ + + Q ++ L+ H V VAW HP
Sbjct: 106 GHTSEVKCVAWCPSGHLIATCGRDKSVWLWEFDDEEDVQCVSVLQPHSQDVKSVAW-HPH 164
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGN 127
G +L S SYD ++ +++E +DWT + H S+V ++P G LA S D
Sbjct: 165 -GEVLVSTSYDNKINVYRE-ELDDWTVFAQLSGHDSTVWKAEFSPS--GDILASCSDDLC 220
Query: 128 ISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTV 187
+ +++ W+ + + + ++S + L Q LASCG DN +
Sbjct: 221 VKLWS------WEGVCGKSSSWMCIATLS---GYHTRTIFDLNWSPDSQLLASCGSDNRL 271
Query: 188 KVWKM-YNGIWKMD---CF---PAL-----QMHSDWVRSVAWAP 219
++KM NG+ + CF P L HS+ V V W P
Sbjct: 272 CIYKMPANGLTHIGGKPCFEEPPVLWGHVPNAHSEDVNCVRWKP 315
Score = 143 (55.4 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 44/130 (33%), Positives = 66/130 (50%)
Query: 178 LASCGCDNTVKVWKMYNG-IWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGT 236
L S G D +K+W N +W F + H +R V W+P G + IASAS DGT
Sbjct: 29 LISSGEDRVIKLWAKCNDQLWGSS-FSLPEAHKKSIRCVTWSP-CG---TYIASASFDGT 83
Query: 237 VVIWTC--AKEGEQWEGRV-LKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGEW 292
V IW A + E V L+ + V V+W +G+L+A + +V LW+ + +
Sbjct: 84 VTIWKISEAHSAPEMEALVSLEGHTSEVKCVAWCPSGHLIATCGRDKSVWLWEFDDEEDV 143
Query: 293 QQVSVVEPQT 302
Q VSV++P +
Sbjct: 144 QCVSVLQPHS 153
Score = 37 (18.1 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 13/48 (27%), Positives = 21/48 (43%)
Query: 208 HSDWVRSVAWAP----NLGLPKST------IASASQDGTVVIWTCAKE 245
HS+ V V W P ++ +S + +AS DG + W+ E
Sbjct: 304 HSEDVNCVRWKPGNITDISHSESISNCHLFLTTASDDGYIKFWSIEYE 351
>UNIPROTKB|Q32PJ6 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9913 "Bos taurus" [GO:0097361 "CIA
complex" evidence=ISS] [GO:0071817 "MMXD complex" evidence=ISS]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0007059 "chromosome segregation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226 GO:GO:0071817
HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:BC108091 IPI:IPI00699811
RefSeq:NP_001032559.1 RefSeq:XP_003585196.1 UniGene:Bt.51463
ProteinModelPortal:Q32PJ6 STRING:Q32PJ6 Ensembl:ENSBTAT00000020797
GeneID:100850134 GeneID:540069 KEGG:bta:100850134 KEGG:bta:540069
CTD:9391 GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532
InParanoid:Q32PJ6 OrthoDB:EOG4MCX0N NextBio:20878397 GO:GO:0097361
Uniprot:Q32PJ6
Length = 339
Score = 182 (69.1 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 64/233 (27%), Positives = 100/233 (42%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH+ TV VA G LA+AS D++ I + + + TL+GH V VAWA P
Sbjct: 59 GHQRTVRKVAWSPCGNYLASASFDATTCIWKKNEDDFECVTTLEGHENEVKSVAWA-PS- 116
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAP-HELGLSLACGSSDGN 127
G++LA+CS D V +W+ ++++ N H V + W P EL LA S D
Sbjct: 117 GNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQEL---LASASYDDT 173
Query: 128 ISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTV 187
+ ++ D W + H V S+++ P+ A + + G + V
Sbjct: 174 VKLYREEEDD-WVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGV 232
Query: 188 KVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW 240
WK C + HS + VAW G T+A+A D + ++
Sbjct: 233 AC-SGSEASWKCVCTLS-GFHSRTIYDVAWCQLTG----TLATACGDDAIRVF 279
Score = 176 (67.0 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 74/281 (26%), Positives = 123/281 (43%)
Query: 23 GKRLATASSDSSIKIIGLSNSASQHLATL-KGHRGPVWQVAWAHPKFGSILASCSYDGQV 81
G LA+ D S++I G + + L +GH+ V +VAW+ P G+ LAS S+D
Sbjct: 28 GTLLASCGGDRSVRIWGREGDSWICKSVLCEGHQRTVRKVAWS-P-CGNYLASASFDATT 85
Query: 82 IIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDT 141
IWK+ N++D+ T H++ V S+AWAP G LA S D ++ V+ + ++
Sbjct: 86 CIWKK-NEDDFECVTTLEGHENEVKSVAWAPS--GNLLATCSRDKSVWVWEVDEEDEYEC 142
Query: 142 TRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMY---NGIWK 198
+ +H V V W P+ L+ D KL D+ V + + +W
Sbjct: 143 VSVLNSHTQDVKHVVWHPSQE---LLASASYDDTVKLYREEEDDWVCCATLEGHESTVWS 199
Query: 199 MDCFPA---LQMHSDWVRSVA-WAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVL 254
+ P+ L SD R+V W L + +A + + + W C + R +
Sbjct: 200 LAFDPSGQRLASCSD-DRTVRIWRQYLPGNEQGVACSGSEAS---WKCVCTLSGFHSRTI 255
Query: 255 KDFKTPVWSVSW-SLTGNLLAVADANNVTLWKEAVDGEWQQ 294
D V+W LTG L + + +++E + QQ
Sbjct: 256 YD-------VAWCQLTGTLATACGDDAIRVFEEDPGSDPQQ 289
Score = 173 (66.0 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 69/244 (28%), Positives = 101/244 (41%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQH-LATLKGHRGPVWQVAWAHPK 67
GHE+ V VA G LAT S D S+ + + ++ L H V V W HP
Sbjct: 103 GHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVW-HPS 161
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGN 127
+LAS SYD V +++E ++DW T H+S+V S+A+ P G LA S D
Sbjct: 162 -QELLASASYDDTVKLYRE-EEDDWVCCATLEGHESTVWSLAFDPS--GQRLASCSDDRT 217
Query: 128 ISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQ-----KLAS-C 181
+ ++ G +Q + SW + D LA+ C
Sbjct: 218 VRIWRQYLPGN------EQGVACSGSEASWKCVCTLSGFHSRTIYDVAWCQLTGTLATAC 271
Query: 182 GCDNTVKVWKMYNGIWKMDCFPAL-----QMHSDWVRSVAWAPNLGLPKSTIASASQDGT 236
G D+ ++V++ G +L Q HS V VAW P + +AS S DG
Sbjct: 272 G-DDAIRVFEEDPGSDPQQPTFSLTAHVPQAHSQDVNCVAWNPK---ERGLLASCSDDGE 327
Query: 237 VVIW 240
+ W
Sbjct: 328 LAFW 331
Score = 159 (61.0 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 46/128 (35%), Positives = 68/128 (53%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPAL-QMHSDWVRSVAWAPNLGLPKSTIASASQDGT 236
LASCG D +V++W W C L + H VR VAW+P G + +ASAS D T
Sbjct: 31 LASCGGDRSVRIWGREGDSWI--CKSVLCEGHQRTVRKVAWSP-CG---NYLASASFDAT 84
Query: 237 VVIWTCAKEGEQWEG-RVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGEWQQ 294
IW K + +E L+ + V SV+W+ +GNLLA + +V +W+ + E++
Sbjct: 85 TCIWK--KNEDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYEC 142
Query: 295 VSVVEPQT 302
VSV+ T
Sbjct: 143 VSVLNSHT 150
Score = 145 (56.1 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 63/203 (31%), Positives = 82/203 (40%)
Query: 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFG 69
H V V + LA+AS D ++K+ ATL+GH VW +A+ P G
Sbjct: 149 HTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAF-DPS-G 206
Query: 70 SILASCSYDGQVIIWKE---GNQN---------DWTQAHTFND-HKSSVNSIAWAPHELG 116
LASCS D V IW++ GN+ W T + H ++ +AW
Sbjct: 207 QRLASCSDDRTVRIWRQYLPGNEQGVACSGSEASWKCVCTLSGFHSRTIYDVAWCQLTGT 266
Query: 117 LSLACGSSDGNISVFTATADGGWD--------TTRIDQAHPVGVTSVSWAPAMAPGALVG 168
L+ ACG D I VF D G D T + QAH V V+W P
Sbjct: 267 LATACG--DDAIRVFEE--DPGSDPQQPTFSLTAHVPQAHSQDVNCVAWNPKER------ 316
Query: 169 LGLLDPVQKLASCGCDNTVKVWK 191
GLL ASC D + WK
Sbjct: 317 -GLL------ASCSDDGELAFWK 332
Score = 134 (52.2 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 37/121 (30%), Positives = 64/121 (52%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
LA+C D +V VW++ + +C L H+ V+ V W P+ L +ASAS D TV
Sbjct: 120 LATCSRDKSVWVWEVDEED-EYECVSVLNSHTQDVKHVVWHPSQEL----LASASYDDTV 174
Query: 238 VIWTCAKEGEQWEG-RVLKDFKTPVWSVSWSLTGNLLA-VADANNVTLWKEAVDGEWQQV 295
++ +E + W L+ ++ VWS+++ +G LA +D V +W++ + G Q V
Sbjct: 175 KLYR--EEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGV 232
Query: 296 S 296
+
Sbjct: 233 A 233
Score = 130 (50.8 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 40/123 (32%), Positives = 60/123 (48%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
LAS D T +WK +C L+ H + V+SVAWAP+ L +A+ S+D +V
Sbjct: 76 LASASFDATTCIWKKNED--DFECVTTLEGHENEVKSVAWAPSGNL----LATCSRDKSV 129
Query: 238 VIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVS 296
+W +E E VL V V W + LLA A ++ V L++E D +W +
Sbjct: 130 WVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEED-DWVCCA 188
Query: 297 VVE 299
+E
Sbjct: 189 TLE 191
Score = 124 (48.7 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 35/104 (33%), Positives = 52/104 (50%)
Query: 59 WQVAWAHPKFGSILASCSYDGQVIIWKEGNQND-WT-QAHTFNDHKSSVNSIAWAPHELG 116
W +AW +P G++LASC D V IW G + D W ++ H+ +V +AW+P G
Sbjct: 20 WFLAW-NPA-GTLLASCGGDRSVRIW--GREGDSWICKSVLCEGHQRTVRKVAWSP--CG 73
Query: 117 LSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPA 160
LA S D ++ D T ++ H V SV+WAP+
Sbjct: 74 NYLASASFDATTCIWKKNEDDFECVTTLE-GHENEVKSVAWAPS 116
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 215 (80.7 bits), Expect = 3.9e-15, P = 3.9e-15
Identities = 99/317 (31%), Positives = 144/317 (45%)
Query: 4 QKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAW 63
Q +E H V V GK+L + S D ++KI + + L TL GH G V +A+
Sbjct: 744 QTLEN-HLGPVESVVFSPDGKQLVSGSYDDTVKI--WDPATGELLQTLDGHSGTVESLAF 800
Query: 64 AHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGS 123
+ P G +LAS SYD + +W + Q TF H S+ S+A+AP G LA S
Sbjct: 801 S-PD-GKLLASGSYDNTIDLWDSAT-GELLQ--TFEGHPHSIWSVAFAPD--GKELASAS 853
Query: 124 SDGNISVFTA-------TADGGWDTTRIDQAHPVG--VTSVS-------WAPAMAP--GA 165
D I ++ T D + R P G + S S W PA +
Sbjct: 854 DDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQS 913
Query: 166 LVGL-GLLDPV------QKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWA 218
L G G + V +KLAS NTVK+W G + L+ HS VRSVA++
Sbjct: 914 LEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATG----ELLQTLEGHSQSVRSVAFS 969
Query: 219 PNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTG-NLLAVAD 277
P+ G +AS+S D T+ +W + GE + K + +V++S G +L++ +D
Sbjct: 970 PD-G---KQLASSSSDTTIKLWN-STTGELQQ--TFKGHDLWIRAVAFSPDGKHLVSGSD 1022
Query: 278 ANNVTLWKEAVDGEWQQ 294
N + LW A E QQ
Sbjct: 1023 DNTIKLWDLATS-ELQQ 1038
Score = 209 (78.6 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 91/313 (29%), Positives = 135/313 (43%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH TV +A GK LA+ S D++I + ++ + L T +GH +W VA+A P
Sbjct: 790 GHSGTVESLAFSPDGKLLASGSYDNTIDL--WDSATGELLQTFEGHPHSIWSVAFA-PD- 845
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
G LAS S D + IW + Q T + H SV S+A++P G LA S D I
Sbjct: 846 GKELASASDDSTIKIWDLAT-GELQQ--TLDSHSQSVRSVAFSPD--GKLLASSSLDSTI 900
Query: 129 SVFT-ATAD--------GGW--------DTTRIDQAHPVGVTSVSWAPAMAP--GALVGL 169
V+ AT + GW D ++ + W PA L G
Sbjct: 901 KVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKL-WNPATGELLQTLEGH 959
Query: 170 G------LLDPVQK-LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLG 222
P K LAS D T+K+W G + + H W+R+VA++P+ G
Sbjct: 960 SQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTG----ELQQTFKGHDLWIRAVAFSPD-G 1014
Query: 223 LPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-V 281
+ S S D T+ +W A Q + L+D V +V++S LA + ++ +
Sbjct: 1015 ---KHLVSGSDDNTIKLWDLATSELQ---QSLEDHSRSVHAVAFSPDDKQLASSSLDSTI 1068
Query: 282 TLWKEAVDGEWQQ 294
LW A GE Q+
Sbjct: 1069 KLWDSAT-GELQR 1080
Score = 207 (77.9 bits), Expect = 5.8e-14, P = 5.8e-14
Identities = 97/321 (30%), Positives = 152/321 (47%)
Query: 4 QKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLA-TLKGHRGPVWQVA 62
Q +E GH +V VA GK+LA++SSD++IK L NS + L T KGH +W A
Sbjct: 954 QTLE-GHSQSVRSVAFSPDGKQLASSSSDTTIK---LWNSTTGELQQTFKGH--DLWIRA 1007
Query: 63 WAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACG 122
A G L S S D + +W ++ Q+ DH SV+++A++P + LA
Sbjct: 1008 VAFSPDGKHLVSGSDDNTIKLWDLAT-SELQQS--LEDHSRSVHAVAFSPDDK--QLASS 1062
Query: 123 SSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAP---AMAPGALVG-LGLLDPV--- 175
S D I ++ + A G + R + H GV SV+++P +A + G + L +P+
Sbjct: 1063 SLDSTIKLWDS-ATG--ELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGE 1119
Query: 176 ---------------------QKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRS 214
++LAS D+T+K+W G + L+ HSD ++S
Sbjct: 1120 LQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATG----ELLQTLEGHSDRIQS 1175
Query: 215 VAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLA 274
V ++P+ L +AS S D T +W A GE + + + V SV++S G LLA
Sbjct: 1176 VVFSPDGKL----LASGSYDQTAKLWDPAT-GELLQ--IFEGHSKWVESVAFSPDGKLLA 1228
Query: 275 VAD-ANNVTLWKEAVDGEWQQ 294
+ + LW + V GE Q
Sbjct: 1229 SSSYGETIKLW-DPVTGELLQ 1248
Score = 181 (68.8 bits), Expect = 9.1e-11, P = 9.1e-11
Identities = 91/315 (28%), Positives = 138/315 (43%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH ++ VA GK LA+AS DS+IKI L+ Q TL H V VA++ P
Sbjct: 832 GHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQ--TLDSHSQSVRSVAFS-PD- 887
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
G +LAS S D + +W + Q+ V S+A++P G LA GS +
Sbjct: 888 GKLLASSSLDSTIKVWNPAT-GELQQS--LEGRSGWVKSVAFSPD--GKKLASGSEKNTV 942
Query: 129 SVFTATADGGWDTTRIDQAHPVGVTSVSWAP------AMAPGALVGL-----GLLDPVQK 177
++ A G + + + H V SV+++P + + + L G L K
Sbjct: 943 KLWNP-ATG--ELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFK 999
Query: 178 -----------------LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPN 220
L S DNT+K+W + + +L+ HS V +VA++P+
Sbjct: 1000 GHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATS----ELQQSLEDHSRSVHAVAFSPD 1055
Query: 221 LGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN 280
+AS+S D T+ +W A GE R L+ V SV++S G LLA +
Sbjct: 1056 ----DKQLASSSLDSTIKLWDSAT-GELQ--RTLEGHSQGVRSVTFSPDGKLLASNSYDG 1108
Query: 281 -VTLWKEAVDGEWQQ 294
+ LW + GE QQ
Sbjct: 1109 TIKLWNP-LTGELQQ 1122
Score = 171 (65.3 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 98/317 (30%), Positives = 136/317 (42%)
Query: 4 QKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAW 63
Q+ H +V VA GK LA++S DS+IK+ + Q +L+G G V VA+
Sbjct: 869 QQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQ--SLEGRSGWVKSVAF 926
Query: 64 AHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGS 123
+ P G LAS S V +W + Q T H SV S+A++P G LA S
Sbjct: 927 S-PD-GKKLASGSEKNTVKLWNPAT-GELLQ--TLEGHSQSVRSVAFSPD--GKQLASSS 979
Query: 124 SDGNISVFTATADG------GWDT-TRIDQAHPVGVTSVS---------W--APAMAPGA 165
SD I ++ +T G D R P G VS W A + +
Sbjct: 980 SDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQS 1039
Query: 166 L------VGLGLLDPVQK-LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWA 218
L V P K LAS D+T+K+W G + L+ HS VRSV ++
Sbjct: 1040 LEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATG----ELQRTLEGHSQGVRSVTFS 1095
Query: 219 PNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADA 278
P+ L +AS S DGT+ +W GE + L V SV++S G LA
Sbjct: 1096 PDGKL----LASNSYDGTIKLWN-PLTGELQQ--TLTGRSDWVDSVAFSPDGKQLASGYY 1148
Query: 279 NN-VTLWKEAVDGEWQQ 294
++ + LW A GE Q
Sbjct: 1149 DSTIKLWDSAT-GELLQ 1164
Score = 170 (64.9 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 88/316 (27%), Positives = 127/316 (40%)
Query: 4 QKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAW 63
Q+ GH+ + VA GK L + S D++IK+ L+ S Q +L+ H V VA+
Sbjct: 995 QQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQ--SLEDHSRSVHAVAF 1052
Query: 64 AHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGS 123
+ P LAS S D + +W T H V S+ ++P G LA S
Sbjct: 1053 S-PD-DKQLASSSLDSTIKLWDSATGE---LQRTLEGHSQGVRSVTFSPD--GKLLASNS 1105
Query: 124 SDGNISVF---------TATADGGW-DTTRIDQ-----AHPVGVTSVS-WAPAMAPGALV 167
DG I ++ T T W D+ A +++ W A
Sbjct: 1106 YDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQT 1165
Query: 168 GLGLLDPVQK---------LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWA 218
G D +Q LAS D T K+W G + + HS WV SVA++
Sbjct: 1166 LEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATG----ELLQIFEGHSKWVESVAFS 1221
Query: 219 PNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADA 278
P+ L +AS+S T+ +W GE + L D SV++S GN LA D
Sbjct: 1222 PDGKL----LASSSYGETIKLWDPVT-GELLQ--TLNDPDESAGSVAFSPDGNRLASVDI 1274
Query: 279 NNVTLWKEAVDGEWQQ 294
+ +W A GE Q
Sbjct: 1275 FDTKIWDPAT-GELLQ 1289
>UNIPROTKB|B5X212 [details] [associations]
symbol:ciao1b "Probable cytosolic iron-sulfur protein
assembly protein ciao1-B" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT045081
ProteinModelPortal:B5X212 Uniprot:B5X212
Length = 333
Score = 203 (76.5 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 78/289 (26%), Positives = 120/289 (41%)
Query: 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAH 65
++ GH+ TV VA G LA+AS D++ I N + L L+GH V VAWA
Sbjct: 56 LQDGHQRTVRKVAWSPCGNYLASASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWA- 114
Query: 66 PKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD 125
P G++LA+CS D V IW+ +N++ N H V + W P + L +C S D
Sbjct: 115 PS-GNLLATCSRDKSVWIWEVDEENEYECVSVVNSHTQDVKHVVWHPTQ-ELLASC-SYD 171
Query: 126 GNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAP-GALVGLGLLDPVQKL-ASCGC 183
N+ V+ D W+ + H TS W P G + D K+ C
Sbjct: 172 NNVCVYKEE-DDDWECRATLEGH----TSTVWGLTFDPSGQRLASCSDDCTVKIWKECQP 226
Query: 184 DNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW--- 240
+ + + WK C + H V +AW P G +A+A D V ++
Sbjct: 227 EGGQEGT---DAAWKCVCTLS-GFHGRTVYDIAWCPLTG----ALATACGDDGVRVFKED 278
Query: 241 -TCAKEGEQWE--GRVLKDFKTPVWSVSW--SLTGNLLAVADANNVTLW 284
T + + V K V ++W G L++ +D + +W
Sbjct: 279 ETADPDQPAFSLSAHVPKAHTQDVNCIAWHPKEAGLLVSCSDNGEIAVW 327
Score = 177 (67.4 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 48/128 (37%), Positives = 70/128 (54%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQM-HSDWVRSVAWAPNLGLPKSTIASASQDGT 236
LASCG D T+++W W +C LQ H VR VAW+P G + +ASAS D T
Sbjct: 31 LASCGGDRTIRIWGREGDSW--ECKTVLQDGHQRTVRKVAWSP-CG---NYLASASFDAT 84
Query: 237 VVIWTCAKEGEQWEG-RVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGEWQQ 294
IW K+ + +E VL+ + V V+W+ +GNLLA + +V +W+ + E++
Sbjct: 85 TCIWK--KKNDDFECLTVLEGHENEVKCVAWAPSGNLLATCSRDKSVWIWEVDEENEYEC 142
Query: 295 VSVVEPQT 302
VSVV T
Sbjct: 143 VSVVNSHT 150
Score = 154 (59.3 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 62/206 (30%), Positives = 87/206 (42%)
Query: 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAH 65
+ H V V + LA+ S D+++ + + + ATL+GH VW + +
Sbjct: 145 VVNSHTQDVKHVVWHPTQELLASCSYDNNVCVYKEEDDDWECRATLEGHTSTVWGLTF-D 203
Query: 66 PKFGSILASCSYDGQVIIWKE----GNQND----WTQAHTFND-HKSSVNSIAWAPHELG 116
P G LASCS D V IWKE G Q W T + H +V IAW P
Sbjct: 204 PS-GQRLASCSDDCTVKIWKECQPEGGQEGTDAAWKCVCTLSGFHGRTVYDIAWCPLTGA 262
Query: 117 LSLACGSSDGNISVFTA--TADGGWD----TTRIDQAHPVGVTSVSWAPAMAPGALVGLG 170
L+ ACG DG + VF TAD + + +AH V ++W P A G
Sbjct: 263 LATACGD-DG-VRVFKEDETADPDQPAFSLSAHVPKAHTQDVNCIAWHPKEA-------G 313
Query: 171 LLDPVQKLASCGCDNTVKVWKMYNGI 196
LL SC + + VW +G+
Sbjct: 314 LL------VSCSDNGEIAVWNYQSGV 333
Score = 147 (56.8 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 43/126 (34%), Positives = 61/126 (48%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
LAS D T +WK N +C L+ H + V+ VAWAP+ L +A+ S+D +V
Sbjct: 76 LASASFDATTCIWKKKND--DFECLTVLEGHENEVKCVAWAPSGNL----LATCSRDKSV 129
Query: 238 VIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADA-NNVTLWKEAVDGEWQQVS 296
IW +E E V+ V V W T LLA NNV ++KE D +W+ +
Sbjct: 130 WIWEVDEENEYECVSVVNSHTQDVKHVVWHPTQELLASCSYDNNVCVYKEE-DDDWECRA 188
Query: 297 VVEPQT 302
+E T
Sbjct: 189 TLEGHT 194
Score = 133 (51.9 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 35/104 (33%), Positives = 52/104 (50%)
Query: 59 WQVAWAHPKFGSILASCSYDGQVIIWKEGNQND-WTQAHTFND-HKSSVNSIAWAPHELG 116
W VAW +PK G++LASC D + IW G + D W D H+ +V +AW+P G
Sbjct: 20 WYVAW-NPK-GTLLASCGGDRTIRIW--GREGDSWECKTVLQDGHQRTVRKVAWSP--CG 73
Query: 117 LSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPA 160
LA S D ++ D ++ + + H V V+WAP+
Sbjct: 74 NYLASASFDATTCIWKKKNDD-FECLTVLEGHENEVKCVAWAPS 116
Score = 112 (44.5 bits), Expect = 0.00081, P = 0.00081
Identities = 35/89 (39%), Positives = 52/89 (58%)
Query: 215 VAWAPNLGLPKSTI-ASASQDGTVVIWTCAKEGEQWEGR-VLKD-FKTPVWSVSWSLTGN 271
VAW N PK T+ AS D T+ IW +EG+ WE + VL+D + V V+WS GN
Sbjct: 22 VAW--N---PKGTLLASCGGDRTIRIW--GREGDSWECKTVLQDGHQRTVRKVAWSPCGN 74
Query: 272 LLAVADANNVT-LWKEAVDGEWQQVSVVE 299
LA A + T +WK+ D +++ ++V+E
Sbjct: 75 YLASASFDATTCIWKKKND-DFECLTVLE 102
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 140 (54.3 bits), Expect = 5.7e-14, Sum P(2) = 5.7e-14
Identities = 48/157 (30%), Positives = 73/157 (46%)
Query: 9 GHEDTVHDVAMDFY--GKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHP 66
GH + V V+++F G LA+ S D+++++ L N+ + H T GH+ V V+WA P
Sbjct: 117 GHAEAV--VSLNFSPDGAHLASGSGDTTVRLWDL-NTETPHF-TCTGHKQWVLCVSWA-P 171
Query: 67 KFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELG---LSLACGS 123
G LAS G +IIW + + + HK +N +AW P+ LA S
Sbjct: 172 D-GKRLASGCKAGSIIIWDP--ETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLASAS 228
Query: 124 SDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPA 160
DG+ ++ G I H VT+V W A
Sbjct: 229 GDGDCRIWDVKL--GQCLMNI-AGHTNAVTAVRWGGA 262
Score = 129 (50.5 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 37/124 (29%), Positives = 60/124 (48%)
Query: 8 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPK 67
TGH++ V+DV K +A+AS D S+++ S+ Q++AT +GH V+ VAW+
Sbjct: 372 TGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDG--QYMATFRGHVQAVYTVAWSADS 429
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGN 127
++ S S D + +W + A H V + WAP G +A G D
Sbjct: 430 --RLIVSGSKDSTLKVWSVQTKK---LAQELPGHADEVFGVDWAPD--GSRVASGGKDKV 482
Query: 128 ISVF 131
I ++
Sbjct: 483 IKLW 486
Score = 110 (43.8 bits), Expect = 5.7e-14, Sum P(2) = 5.7e-14
Identities = 35/111 (31%), Positives = 57/111 (51%)
Query: 173 DPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASAS 232
D V+ L SC DNT+ +W+ N K C + H + V V ++P++ L IASAS
Sbjct: 343 DEVESLVSCSDDNTLYLWR--NNQNK--CVERMTGHQNVVNDVKYSPDVKL----IASAS 394
Query: 233 QDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANNVTL 283
D +V +W A +G+ + V++V+WS L+ V+ + + TL
Sbjct: 395 FDKSVRLWR-ASDGQYMA--TFRGHVQAVYTVAWSADSRLI-VSGSKDSTL 441
Score = 92 (37.4 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 41/148 (27%), Positives = 63/148 (42%)
Query: 49 ATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSI 108
+++ GH V + ++ P G+ LAS S D V +W + N T T HK V +
Sbjct: 113 SSMPGHAEAVVSLNFS-PD-GAHLASGSGDTTVRLW---DLNTETPHFTCTGHKQWVLCV 167
Query: 109 AWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVG 168
+WAP G LA G G+I ++ + G R H + ++W P
Sbjct: 168 SWAPD--GKRLASGCKAGSIIIWDP--ETGQQKGRPLSGHKKHINCLAWEPYHR------ 217
Query: 169 LGLLDP-VQKLASCGCDNTVKVWKMYNG 195
DP +KLAS D ++W + G
Sbjct: 218 ----DPECRKLASASGDGDCRIWDVKLG 241
Score = 87 (35.7 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 31/111 (27%), Positives = 52/111 (46%)
Query: 175 VQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQD 234
V+ +AS D +V++W+ +G + M F H V +VAW+ + L I S S+D
Sbjct: 387 VKLIASASFDKSVRLWRASDGQY-MATFRG---HVQAVYTVAWSADSRL----IVSGSKD 438
Query: 235 GTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANNVT-LW 284
T+ +W+ + E L V+ V W+ G+ +A + V LW
Sbjct: 439 STLKVWSVQTKKLAQE---LPGHADEVFGVDWAPDGSRVASGGKDKVIKLW 486
Score = 82 (33.9 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 32/107 (29%), Positives = 48/107 (44%)
Query: 8 TGHEDTVHDVAMDFYGK-----RLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVA 62
+GH+ ++ +A + Y + +LA+AS D +I + Q L + GH V V
Sbjct: 201 SGHKKHINCLAWEPYHRDPECRKLASASGDGDCRIWDVK--LGQCLMNIAGHTNAVTAVR 258
Query: 63 WAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIA 109
W G I S S D V +W+ D TF+ H VN+IA
Sbjct: 259 WGGA--GLIYTS-SKDRTVKMWRAA---DGILCRTFSGHAHWVNNIA 299
>DICTYBASE|DDB_G0269728 [details] [associations]
symbol:ciao1 "putative cytosolic iron-sulfur assembly
protein" species:44689 "Dictyostelium discoideum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0269728 EMBL:AAFI02000005
GenomeReviews:CM000150_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
HSSP:P63005 RefSeq:XP_646229.1 ProteinModelPortal:Q55DA2
STRING:Q55DA2 EnsemblProtists:DDB0266672 GeneID:8617183
KEGG:ddi:DDB_G0269728 ProtClustDB:CLSZ2497289 Uniprot:Q55DA2
Length = 333
Score = 197 (74.4 bits), Expect = 6.5e-14, P = 6.5e-14
Identities = 73/281 (25%), Positives = 118/281 (41%)
Query: 12 DTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAW-AHPKFGS 70
D V ++A G+ LAT ++D I+I S + ++ G V A G
Sbjct: 25 DKVWNLAWHPNGEILATCANDKYIQI--WSKDTNGKWGLVQSLEGHEKTVRRVAWSPCGR 82
Query: 71 ILASCSYDGQVIIW-KEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNIS 129
LA S+D IW K ++ ++T + H V S+AW G LA S D +I
Sbjct: 83 FLAGASFDASTSIWEKSKDELEFTHVSSLEGHTYEVKSVAW--DSTGTLLATCSRDKSIW 140
Query: 130 VFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKV 189
++ D ++ I+ H + V W P + LAS D+T+K
Sbjct: 141 IWQMEDDNDFECLSINSGHGQDIKCVLWHPNE--------------ELLASSSYDDTIKF 186
Query: 190 WKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQW 249
WK +G W +C L H + +A+ + G + S +D V+ W KE E+W
Sbjct: 187 WKDIDGDW--ECINTLTGHESSIWDLAFNKD-G---DKLVSCGEDKLVLFWKFDKENEKW 240
Query: 250 EGRVLKDFKT----PVWSVSWSLTGNLLAVADANNVTLWKE 286
+ K FK P++S+ WS N + A++ ++ E
Sbjct: 241 IN-IFK-FKNENSRPIYSIDWSSLTNTIVTGSADDSIIFYE 279
Score = 176 (67.0 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 50/156 (32%), Positives = 74/156 (47%)
Query: 4 QKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQ--HLATLKGHRGPVWQV 61
Q +E GHE TV VA G+ LA AS D+S I S + H+++L+GH V V
Sbjct: 63 QSLE-GHEKTVRRVAWSPCGRFLAGASFDASTSIWEKSKDELEFTHVSSLEGHTYEVKSV 121
Query: 62 AWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLAC 121
AW G++LA+CS D + IW+ + ND+ + H + + W P+E LA
Sbjct: 122 AW--DSTGTLLATCSRDKSIWIWQMEDDNDFECLSINSGHGQDIKCVLWHPNEE--LLAS 177
Query: 122 GSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSW 157
S D I F DG W+ H + +++
Sbjct: 178 SSYDDTIK-FWKDIDGDWECINTLTGHESSIWDLAF 212
Score = 161 (61.7 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 53/193 (27%), Positives = 83/193 (43%)
Query: 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAH 65
I +GH + V + LA++S D +IK + + + TL GH +W +A+
Sbjct: 155 INSGHGQDIKCVLWHPNEELLASSSYDDTIKFWKDIDGDWECINTLTGHESSIWDLAFN- 213
Query: 66 PKFGSILASCSYDGQVIIWKEGNQND-WTQAHTF-NDHKSSVNSIAWAPHELGLSLACGS 123
K G L SC D V+ WK +N+ W F N++ + SI W+ L ++ GS
Sbjct: 214 -KDGDKLVSCGEDKLVLFWKFDKENEKWINIFKFKNENSRPIYSIDWS--SLTNTIVTGS 270
Query: 124 SDGNISVFTATADGGWDTTRI----DQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLA 179
+D +I + +D D +I AH V W P LA
Sbjct: 271 ADDSIIFYEQESDDTPDKYKIILKKKNAHDSDVNCTKWNPKFK-------------NILA 317
Query: 180 SCGCDNTVKVWKM 192
SCG D +K+W++
Sbjct: 318 SCGDDGFIKIWEL 330
Score = 50 (22.7 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 208 HSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW 240
H V W P K+ +AS DG + IW
Sbjct: 299 HDSDVNCTKWNPKF---KNILASCGDDGFIKIW 328
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 195 (73.7 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 72/238 (30%), Positives = 105/238 (44%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH D+V DVA D GK LA+ S+D SIK+ S + + T+ GH V VA+ P
Sbjct: 148 GHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSY-ECIKTMHGHDHNVSSVAFV-PA- 204
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
G + S S D + +W+ T+ H+ V + H G A S+D I
Sbjct: 205 GDYVLSASRDRTIKMWEVATGYC---VKTYTGHREWVRMVR--VHIEGSIFATCSNDQTI 259
Query: 129 SVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQK------LASCG 182
V+ + R D H V ++WAP A A+ D + LAS
Sbjct: 260 RVWLTNSKDCKVELR-DHEHTV--ECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGS 316
Query: 183 CDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW 240
D T+++W + G+ C L H +WVR +A+ P G + SAS D T+ +W
Sbjct: 317 RDKTIRIWDVSVGL----CLLTLSGHDNWVRGLAFHPG-G---KYLVSASDDKTIRVW 366
Score = 146 (56.5 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 66/239 (27%), Positives = 104/239 (43%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH+ V VA G + +AS D +IK+ ++ + T GHR V V H +
Sbjct: 191 GHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYC--VKTYTGHREWVRMVR-VHIE- 246
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSL--ACGSSD- 125
GSI A+CS D + +W +++ + DH+ +V IAWAP ++ A G+ +
Sbjct: 247 GSIFATCSNDQTIRVWLTNSKDCKVE---LRDHEHTVECIAWAPEAAASAINEAAGADNK 303
Query: 126 -GNISVFTATADGGWDTT-RIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGC 183
G+ A G D T RI VG+ ++ + + GL + L S
Sbjct: 304 KGHHQG-PFLASGSRDKTIRIWDVS-VGLCLLTLSGH--DNWVRGLAFHPGGKYLVSASD 359
Query: 184 DNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC 242
D T++VW + N C L H + S+ + + P + S S D TV +W C
Sbjct: 360 DKTIRVWDLRN----KRCMKTLYAHQHFCTSIDF--HKAHPY--VISGSVDQTVKVWEC 410
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 195 (73.7 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 94/306 (30%), Positives = 137/306 (44%)
Query: 4 QKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLA-TLKGHRGPVWQVA 62
Q +E GH D + V G+ LA+ S+D++IK L + AS L TL+GH V VA
Sbjct: 35 QTLE-GHSDWIETVTFSPDGRLLASGSNDTTIK---LWDPASGGLKQTLEGHSSSVQSVA 90
Query: 63 WAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACG 122
++ P G +LAS S D + +W + + HT H V S+A++P+ + A G
Sbjct: 91 FS-PN-GQLLASGSSDTTIKLWNSASDS---LKHTMEGHSDRVESVAFSPNGQLWNPAIG 145
Query: 123 S--------SDGNISV-FTAT----ADGG-------WDTTRIDQAHPVGVTSVSWAPAMA 162
S SD +SV F+ A G WD+ H +G S +W +
Sbjct: 146 SLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHS-NW---VL 201
Query: 163 PGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLG 222
P G L LAS D T+K+W +G K L+ HS+ + S+A++PN
Sbjct: 202 PLVFSPDGRL-----LASGSNDATIKLWDPPSGSLKH----TLEGHSNKIESLAFSPNGQ 252
Query: 223 LPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-V 281
L +AS S D T+ +W A + LK V SV +S LL +N +
Sbjct: 253 L----LASGSSDATIKLWDTATGSFR---HTLKGHSDMVLSVVFSPDSQLLESGSGDNTI 305
Query: 282 TLWKEA 287
LW A
Sbjct: 306 KLWDPA 311
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 156 (60.0 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 49/152 (32%), Positives = 68/152 (44%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH + V VA GK LA+ S D++++ LS Q T KGHR V +AW+ P
Sbjct: 125 GHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPQF--TAKGHRHWVLSIAWS-PD- 180
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLS---LACGSSD 125
G LAS + Q+ +W N + T H + + W P + LA S D
Sbjct: 181 GKKLASGCKNSQIFLWDPATGNQIGRVLT--GHSKWITCLCWEPLHINPECRYLASASKD 238
Query: 126 GNISVFTATADGGWDTTRIDQAHPVGVTSVSW 157
G+I ++ T G D +I H VT V W
Sbjct: 239 GSIRIWD-TLMGRCD--KILTGHTQSVTCVKW 267
Score = 77 (32.2 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 28/123 (22%), Positives = 53/123 (43%)
Query: 165 ALVGLGLLDPVQKL-ASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGL 223
AL+ L P ++ AS D ++K+W+ G + +L+ H V +AW+ + L
Sbjct: 386 ALINQVLFSPDTRIIASASFDKSIKLWEGRTGKY----LTSLRGHVSAVYQIAWSADSRL 441
Query: 224 PKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VT 282
+ S S D T+ +W + + L V++ WS G +A + +
Sbjct: 442 ----LVSGSSDSTLKVWDAETKKLAID---LPGHADEVFATDWSPDGQRVASGGKDKCLR 494
Query: 283 LWK 285
+W+
Sbjct: 495 IWR 497
Score = 38 (18.4 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 13/59 (22%), Positives = 29/59 (49%)
Query: 228 IASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWK 285
+ S S D T+ +W A++ + E + + + V +S ++A A + ++ LW+
Sbjct: 357 LVSGSDDFTLFLWRPAEDKKPLER--MTGHQALINQVLFSPDTRIIASASFDKSIKLWE 413
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 195 (73.7 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 100/315 (31%), Positives = 137/315 (43%)
Query: 2 PAQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQV 61
PAQ GH+ V V+ + LA+AS D ++KI + S Q+ TL+GH V V
Sbjct: 256 PAQF--KGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQN--TLEGHNEWVKSV 311
Query: 62 AWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLAC 121
++H +LAS S DG V IW T H SV S+ ++ H+ L +A
Sbjct: 312 VFSHDS--RLLASASDDGTVKIWDTATG---TLQRMLKGHNDSVRSVVFS-HDSRL-IAS 364
Query: 122 GSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWA------PAMAPGALVGL-----G 170
GS+D + ++ T G T D H V +VS+A + + G V + G
Sbjct: 365 GSNDRTVRIWETTT-GLLRHTFED--HEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTG 421
Query: 171 LLDPVQK-----------------LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVR 213
L V + LAS D TVK+W G + L+ H+DWVR
Sbjct: 422 SLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQR----TLEGHNDWVR 477
Query: 214 SVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLL 273
SV ++ + L IASAS D TV IW A Q L+ V SV +S LL
Sbjct: 478 SVVFSHDSRL----IASASDDMTVKIWDTATVPLQ---NNLESHDNWVRSVVFSHDSRLL 530
Query: 274 AVA-DANNVTLWKEA 287
A A D V +W A
Sbjct: 531 ASASDDMTVKIWDTA 545
Score = 180 (68.4 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 85/307 (27%), Positives = 129/307 (42%)
Query: 4 QKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAW 63
Q++ GH D+V V + +A+ S+D +++I + +H T + H V V++
Sbjct: 340 QRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRH--TFEDHEDSVMAVSF 397
Query: 64 AHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGS 123
AH LAS S G V IW + + + H VNS++++P LA S
Sbjct: 398 AHDS--RRLASASDGGNVKIW---DTRTGSLQNVLEGHDDCVNSVSFSPDSR--LLASAS 450
Query: 124 SDGNISVFTA-------TADGGWDTTR-IDQAHPVG-VTSVS-------WAPAMAP---- 163
D + ++ A T +G D R + +H + S S W A P
Sbjct: 451 DDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNN 510
Query: 164 -----GALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWA 218
+ + + LAS D TVK+W G + L+ H D V SV+++
Sbjct: 511 LESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLEN----TLEGHDDRVNSVSFS 566
Query: 219 PNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVA-D 277
P+ L +ASAS DGTV IW A Q S+++S T NLLA A D
Sbjct: 567 PDSRL----LASASDDGTVKIWYAATGTVQ---HTFDGSGRVAISLAFSHTSNLLASAMD 619
Query: 278 ANNVTLW 284
V +W
Sbjct: 620 DGTVKIW 626
>UNIPROTKB|F1SU35 [details] [associations]
symbol:CIAO1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0097361 "CIA complex" evidence=IEA] [GO:0071817 "MMXD
complex" evidence=IEA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0071817 OMA:SWKCVCT
GeneTree:ENSGT00700000104486 EMBL:CU896688
Ensembl:ENSSSCT00000008907 Uniprot:F1SU35
Length = 337
Score = 170 (64.9 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 78/282 (27%), Positives = 123/282 (43%)
Query: 23 GKRLATASSDSSIKIIGLSNSASQHLATL-KGHRGPVWQVAWAHPKFGSILASCSYDGQV 81
G LA+ D S++I G + + L +GH+ V +VAW+ P G+ LAS S+D
Sbjct: 28 GTLLASCGGDRSVRIWGREGDSWICKSVLCEGHQRTVRKVAWS-P-CGNYLASASFDATT 85
Query: 82 IIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGG-WD 140
IWK+ N++D+ T H++ V S+AWAP G LA S D ++ V+ T + D
Sbjct: 86 CIWKK-NKDDFECVTTLEGHENEVKSVAWAPS--GNLLATCSRDKSVWVWEGTVENQPSD 142
Query: 141 TTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMY---NGIW 197
TR+ P + V W P+ L+ D KL D+ V + + +W
Sbjct: 143 PTRVPYK-PQSMKKVLWHPSQE---LLASASYDDTVKLYREEEDDWVCCATLEGHESTVW 198
Query: 198 KMDCFPA---LQMHSDWVRSVA-WAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRV 253
+ P+ L SD R+V W L + +A D + W C + R
Sbjct: 199 SLAFDPSGQRLASCSD-DRTVRIWRQYLPGNEQGVACNGSDPS---WKCICTLSGFHSRT 254
Query: 254 LKDFKTPVWSVSW-SLTGNLLAVADANNVTLWKEAVDGEWQQ 294
+ D V+W LTG L + + +++E + QQ
Sbjct: 255 IYD-------VAWCQLTGALATACGDDAIRVFEEDPGSDPQQ 289
Score = 157 (60.3 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 50/154 (32%), Positives = 74/154 (48%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH+ TV VA G LA+AS D++ I + + + TL+GH V VAWA P
Sbjct: 59 GHQRTVRKVAWSPCGNYLASASFDATTCIWKKNKDDFECVTTLEGHENEVKSVAWA-PS- 116
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHK-SSVNSIAWAP-HELGLSLACGSSDG 126
G++LA+CS D V +W EG + T +K S+ + W P EL LA S D
Sbjct: 117 GNLLATCSRDKSVWVW-EGTVENQPSDPTRVPYKPQSMKKVLWHPSQEL---LASASYDD 172
Query: 127 NISVFTATADGGWDTTRIDQAHPVGVTSVSWAPA 160
+ ++ D W + H V S+++ P+
Sbjct: 173 TVKLYREEEDD-WVCCATLEGHESTVWSLAFDPS 205
Score = 155 (59.6 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 64/239 (26%), Positives = 99/239 (41%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKII-GLSNSASQHLATLKGHRGPVWQVAWAHPK 67
GHE+ V VA G LAT S D S+ + G + + + +V W HP
Sbjct: 103 GHENEVKSVAWAPSGNLLATCSRDKSVWVWEGTVENQPSDPTRVPYKPQSMKKVLW-HPS 161
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGN 127
+LAS SYD V +++E ++DW T H+S+V S+A+ P G LA S D
Sbjct: 162 -QELLASASYDDTVKLYRE-EEDDWVCCATLEGHESTVWSLAFDPS--GQRLASCSDDRT 217
Query: 128 ISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLAS-CGCDNT 186
+ ++ G + + P + + + LA+ CG D+
Sbjct: 218 VRIWRQYLPGNEQGVACNGSDP-SWKCICTLSGFHSRTIYDVAWCQLTGALATACG-DDA 275
Query: 187 VKVWKMYNGIWKMDCFPAL-----QMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW 240
++V++ G +L Q HS V VAW P + +AS S DG + W
Sbjct: 276 IRVFEEDPGSDPQQPTFSLTAHLPQAHSQDVNCVAWNPK---EQGLLASCSDDGELAFW 331
Score = 144 (55.7 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 60/187 (32%), Positives = 78/187 (41%)
Query: 26 LATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWK 85
LA+AS D ++K+ ATL+GH VW +A+ P G LASCS D V IW+
Sbjct: 165 LASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAF-DPS-GQRLASCSDDRTVRIWR 222
Query: 86 E---GNQN---------DWTQAHTFND-HKSSVNSIAWAPHELGLSLACGSSDGNISVFT 132
+ GN+ W T + H ++ +AW L+ ACG D I VF
Sbjct: 223 QYLPGNEQGVACNGSDPSWKCICTLSGFHSRTIYDVAWCQLTGALATACG--DDAIRVFE 280
Query: 133 ATADGGWD--------TTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCD 184
D G D T + QAH V V+W P GLL ASC D
Sbjct: 281 E--DPGSDPQQPTFSLTAHLPQAHSQDVNCVAWNPKEQ-------GLL------ASCSDD 325
Query: 185 NTVKVWK 191
+ WK
Sbjct: 326 GELAFWK 332
Score = 124 (48.7 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 35/104 (33%), Positives = 52/104 (50%)
Query: 59 WQVAWAHPKFGSILASCSYDGQVIIWKEGNQND-WT-QAHTFNDHKSSVNSIAWAPHELG 116
W +AW +P G++LASC D V IW G + D W ++ H+ +V +AW+P G
Sbjct: 20 WFLAW-NPA-GTLLASCGGDRSVRIW--GREGDSWICKSVLCEGHQRTVRKVAWSP--CG 73
Query: 117 LSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPA 160
LA S D ++ D T ++ H V SV+WAP+
Sbjct: 74 NYLASASFDATTCIWKKNKDDFECVTTLE-GHENEVKSVAWAPS 116
Score = 116 (45.9 bits), Expect = 0.00029, P = 0.00029
Identities = 50/197 (25%), Positives = 84/197 (42%)
Query: 106 NSIAW--APHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAP 163
+S W A + G LA D ++ ++ D + + + H V V+W+P
Sbjct: 16 DSRCWFLAWNPAGTLLASCGGDRSVRIWGREGDSWICKSVLCEGHQRTVRKVAWSPC--- 72
Query: 164 GALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGL 223
G LAS D T +WK +C L+ H + V+SVAWAP+ L
Sbjct: 73 ------G-----NYLASASFDATTCIWKKNKD--DFECVTTLEGHENEVKSVAWAPSGNL 119
Query: 224 PKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VT 282
+A+ S+D +V +W E + + + + V W + LLA A ++ V
Sbjct: 120 ----LATCSRDKSVWVWEGTVENQPSDPTRVPYKPQSMKKVLWHPSQELLASASYDDTVK 175
Query: 283 LWKEAVDGEWQQVSVVE 299
L++E D +W + +E
Sbjct: 176 LYREEED-DWVCCATLE 191
Score = 104 (41.7 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 34/122 (27%), Positives = 60/122 (49%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPA-LQMHSDWVRSVAWAPNLGLPKSTIASASQDGT 236
LA+C D +V VW+ + P + ++ V W P+ L +ASAS D T
Sbjct: 120 LATCSRDKSVWVWE--GTVENQPSDPTRVPYKPQSMKKVLWHPSQEL----LASASYDDT 173
Query: 237 VVIWTCAKEGEQWEG-RVLKDFKTPVWSVSWSLTGNLLA-VADANNVTLWKEAVDGEWQQ 294
V ++ +E + W L+ ++ VWS+++ +G LA +D V +W++ + G Q
Sbjct: 174 VKLYR--EEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQG 231
Query: 295 VS 296
V+
Sbjct: 232 VA 233
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 164 (62.8 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 49/153 (32%), Positives = 75/153 (49%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH + V VA GK LA+ S D++++ LS + H T KGHR V ++W+ P
Sbjct: 114 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTE-TPHF-TCKGHRHWVLSISWS-PD- 169
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQA-HTFNDHKSSVNSIAWAPHELGLS---LACGSS 124
G LAS +GQ+++W + + TQ T H + ++W P + +A S
Sbjct: 170 GKKLASGCKNGQILLW---DPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSK 226
Query: 125 DGNISVFTATADGGWDTTRIDQAHPVGVTSVSW 157
DG++ V+ TA G + RI H VT + W
Sbjct: 227 DGSVRVWDTTA-GRCE--RILTGHTQSVTCLRW 256
Score = 123 (48.4 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 35/118 (29%), Positives = 56/118 (47%)
Query: 8 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPK 67
TGH+ ++ V + +A+AS D SIK+ ++LA+L+GH V+Q+AW+
Sbjct: 371 TGHQALINQVLFSPDSRIVASASFDKSIKL--WDGRTGKYLASLRGHVAAVYQIAWSADS 428
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD 125
+L S S D + +W Q T H V ++ W+P G +A G D
Sbjct: 429 --RLLVSGSSDSTLKVWDVKAQKLTTD---LPGHADEVYAVDWSPD--GQRVASGGKD 479
Score = 116 (45.9 bits), Expect = 0.00053, P = 0.00053
Identities = 49/169 (28%), Positives = 71/169 (42%)
Query: 49 ATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSI 108
++L+GH V VA++ P G LAS S D V W + T T H+ V SI
Sbjct: 110 SSLEGHSEAVISVAFS-PT-GKYLASGSGDTTVRFWDLSTE---TPHFTCKGHRHWVLSI 164
Query: 109 AWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVG 168
+W+P G LA G +G I ++ + G R H +T +SW P
Sbjct: 165 SWSPD--GKKLASGCKNGQILLWDPST--GTQVGRTLTGHSKWITGLSWEP--------- 211
Query: 169 LGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAW 217
L + + +AS D +V+VW G C L H+ V + W
Sbjct: 212 LHMNPECRYVASSSKDGSVRVWDTTAG----RCERILTGHTQSVTCLRW 256
Score = 63 (27.2 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
L S D+T+KVW + D L H+D V +V W+P+ G +AS +D +
Sbjct: 431 LVSGSSDSTLKVWDVKAQKLTTD----LPGHADEVYAVDWSPD-G---QRVASGGKDKCL 482
Query: 238 VIW 240
IW
Sbjct: 483 RIW 485
Score = 61 (26.5 bits), Expect = 8.9e-12, Sum P(2) = 8.9e-12
Identities = 27/110 (24%), Positives = 51/110 (46%)
Query: 176 QKLASCGCDNTVKVWKMYNGIWKMDCFPALQM--HSDWVRSVAWAPNLGLPKSTIASASQ 233
++L S D T+ +W D P +M H + V ++P+ + +ASAS
Sbjct: 344 ERLVSGSDDFTLFLWSPAE-----DKKPLARMTGHQALINQVLFSPDSRI----VASASF 394
Query: 234 DGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANNVTL 283
D ++ +W + G+ L+ V+ ++WS LL V+ +++ TL
Sbjct: 395 DKSIKLWD-GRTGKYLAS--LRGHVAAVYQIAWSADSRLL-VSGSSDSTL 440
Score = 40 (19.1 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 176 QKLASCGCDNTVKVWK 191
Q++AS G D +++W+
Sbjct: 471 QRVASGGKDKCLRIWR 486
>UNIPROTKB|B7QKS1 [details] [associations]
symbol:ISCW023049 "Probable cytosolic iron-sulfur protein
assembly protein" species:6945 "Ixodes scapularis" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
OrthoDB:EOG45DV4X EMBL:DS961804 RefSeq:XP_002415776.1
UniGene:Isc.5088 ProteinModelPortal:B7QKS1 STRING:B7QKS1
EnsemblMetazoa:ISCW023049-RA GeneID:8042725
KEGG:isc:IscW_ISCW023049 VectorBase:ISCW023049 CTD:8042725
PhylomeDB:B7QKS1 Uniprot:B7QKS1
Length = 315
Score = 180 (68.4 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 60/192 (31%), Positives = 85/192 (44%)
Query: 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAH 65
++T H V V LA+AS D++I+ Q TL H VW +++
Sbjct: 142 VQTCHSQDVKKVLWHPDRDELASASYDNTIRFFCEEVDDWQCYCTLDKHASTVWGLSFG- 200
Query: 66 PKFGSILASCSYDGQVIIW-KEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSS 124
P LASC+ DG V +W +G++ W T H V ++W L+ ACG
Sbjct: 201 PGPEPQLASCAADGSVYVWGTKGDRRSWELCGTLERHPRPVYDVSWCRTRGFLATACG-- 258
Query: 125 DGNISVFTATADGG---WDT-TRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLAS 180
D + VF DGG W + QAH V SVSW+P+ G L LAS
Sbjct: 259 DNAVRVFVK--DGGDCSWRLGCTLTQAHSQDVNSVSWSPS---GGL-----------LAS 302
Query: 181 CGCDNTVKVWKM 192
G D V++W++
Sbjct: 303 AGDDGYVRLWQI 314
Score = 175 (66.7 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 70/224 (31%), Positives = 90/224 (40%)
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
G LA+CS D V IW+ G ++ A H V + W P LA S D I
Sbjct: 114 GRFLATCSRDKTVWIWEVGEDEEFECASVQTCHSQDVKKVLWHPDRD--ELASASYDNTI 171
Query: 129 SVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVK 188
F D W H S W + PG P +LASC D +V
Sbjct: 172 RFFCEEVDD-WQCYCTLDKH----ASTVWGLSFGPG---------PEPQLASCAADGSVY 217
Query: 189 VW--KMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEG 246
VW K W++ C L+ H V V+W G +A+A D V ++ K+G
Sbjct: 218 VWGTKGDRRSWEL-C-GTLERHPRPVYDVSWCRTRGF----LATACGDNAVRVFV--KDG 269
Query: 247 EQ--WE-GRVLKDFKTP-VWSVSWSLTGNLLAVA-DANNVTLWK 285
W G L + V SVSWS +G LLA A D V LW+
Sbjct: 270 GDCSWRLGCTLTQAHSQDVNSVSWSPSGGLLASAGDDGYVRLWQ 313
Score = 174 (66.3 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 48/153 (31%), Positives = 73/153 (47%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATL-KGHRGPVWQVAWAHPK 67
GHED V +VA + G LA+ D SI++ GL + + L GH+ V V+W++
Sbjct: 11 GHEDRVWNVAWNPSGTILASCGGDKSIRLWGLEGGSWVCKSVLLDGHQRTVRGVSWSN-- 68
Query: 68 FGSILASCSYDGQVIIWKEGNQND-WTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDG 126
G LAS S+DG IW+ Q+D + T H++ V + W+P G LA S D
Sbjct: 69 CGRYLASSSFDGTTCIWRR--QDDTFESCATLEGHENEVKACGWSPS--GRFLATCSRDK 124
Query: 127 NISVFTATADGGWDTTRIDQAHPVGVTSVSWAP 159
+ ++ D ++ + H V V W P
Sbjct: 125 TVWIWEVGEDEEFECASVQTCHSQDVKKVLWHP 157
Score = 161 (61.7 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 47/155 (30%), Positives = 64/155 (41%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH+ TV V+ G+ LA++S D + I + + ATL+GH V W+ P
Sbjct: 56 GHQRTVRGVSWSNCGRYLASSSFDGTTCIWRRQDDTFESCATLEGHENEVKACGWS-PS- 113
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
G LA+CS D V IW+ G ++ A H V + W P LA S D I
Sbjct: 114 GRFLATCSRDKTVWIWEVGEDEEFECASVQTCHSQDVKKVLWHPDRD--ELASASYDNTI 171
Query: 129 SVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAP 163
F D W H V +S+ P P
Sbjct: 172 RFFCEEVDD-WQCYCTLDKHASTVWGLSFGPGPEP 205
Score = 144 (55.7 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 39/122 (31%), Positives = 61/122 (50%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
LASCG D ++++W + G W L H VR V+W+ N G +AS+S DGT
Sbjct: 28 LASCGGDKSIRLWGLEGGSWVCKSV-LLDGHQRTVRGVSWS-NCG---RYLASSSFDGTT 82
Query: 238 VIWTCAKEGEQWEG-RVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQV 295
IW ++ + +E L+ + V + WS +G LA + V +W+ D E++
Sbjct: 83 CIWR--RQDDTFESCATLEGHENEVKACGWSPSGRFLATCSRDKTVWIWEVGEDEEFECA 140
Query: 296 SV 297
SV
Sbjct: 141 SV 142
Score = 136 (52.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 36/115 (31%), Positives = 56/115 (48%)
Query: 48 LATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWK-EGNQNDWTQAHTFND-HKSSV 105
L+ L+GH VW VAW +P G+ILASC D + +W EG W D H+ +V
Sbjct: 6 LSDLEGHEDRVWNVAW-NPS-GTILASCGGDKSIRLWGLEGGS--WVCKSVLLDGHQRTV 61
Query: 106 NSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPA 160
++W+ G LA S DG ++ D +++ + H V + W+P+
Sbjct: 62 RGVSWS--NCGRYLASSSFDGTTCIWRRQ-DDTFESCATLEGHENEVKACGWSPS 113
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 160 (61.4 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 48/152 (31%), Positives = 71/152 (46%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH + V VA GK LA+ S D++++ LS + H T KGHR V ++W+ P
Sbjct: 112 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTE-TPHF-TCKGHRHWVLSISWS-PD- 167
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLS---LACGSSD 125
G LAS +GQV++W T H + ++W P + +A S D
Sbjct: 168 GKKLASGCKNGQVLLWDPST--GLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKD 225
Query: 126 GNISVFTATADGGWDTTRIDQAHPVGVTSVSW 157
G++ V+ TA G + RI H VT + W
Sbjct: 226 GSVRVWDTTA-GRCE--RILTGHTQSVTCLRW 254
Score = 123 (48.4 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 35/118 (29%), Positives = 56/118 (47%)
Query: 8 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPK 67
TGH+ ++ V + +A+AS D SIK+ ++LA+L+GH V+Q+AW+
Sbjct: 369 TGHQALINQVLFSPDSRIVASASFDKSIKL--WDGRTGKYLASLRGHVAAVYQIAWSADS 426
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD 125
+L S S D + +W Q A H V ++ W+P G +A G D
Sbjct: 427 --RLLVSGSSDSTLKVWDVKAQK---LATDLPGHADEVYAVDWSPD--GQRVASGGKD 477
Score = 115 (45.5 bits), Expect = 0.00069, P = 0.00069
Identities = 48/169 (28%), Positives = 71/169 (42%)
Query: 49 ATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSI 108
++L+GH V VA++ P G LAS S D V W + T T H+ V SI
Sbjct: 108 SSLEGHSEAVISVAFS-PT-GKYLASGSGDTTVRFWDLSTE---TPHFTCKGHRHWVLSI 162
Query: 109 AWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVG 168
+W+P G LA G +G + ++ + G R H +T +SW P
Sbjct: 163 SWSPD--GKKLASGCKNGQVLLWDPST--GLQVGRTLTGHSKWITGLSWEP--------- 209
Query: 169 LGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAW 217
L + + +AS D +V+VW G C L H+ V + W
Sbjct: 210 LHMNPECRYVASSSKDGSVRVWDTTAG----RCERILTGHTQSVTCLRW 254
Score = 63 (27.2 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
L S D+T+KVW + D L H+D V +V W+P+ G +AS +D +
Sbjct: 429 LVSGSSDSTLKVWDVKAQKLATD----LPGHADEVYAVDWSPD-G---QRVASGGKDKCL 480
Query: 238 VIW 240
IW
Sbjct: 481 RIW 483
Score = 61 (26.5 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 27/110 (24%), Positives = 51/110 (46%)
Query: 176 QKLASCGCDNTVKVWKMYNGIWKMDCFPALQM--HSDWVRSVAWAPNLGLPKSTIASASQ 233
++L S D T+ +W D P +M H + V ++P+ + +ASAS
Sbjct: 342 ERLVSGSDDFTLFLWSPAE-----DKKPLARMTGHQALINQVLFSPDSRI----VASASF 392
Query: 234 DGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANNVTL 283
D ++ +W + G+ L+ V+ ++WS LL V+ +++ TL
Sbjct: 393 DKSIKLWD-GRTGKYLAS--LRGHVAAVYQIAWSADSRLL-VSGSSDSTL 438
Score = 40 (19.1 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 176 QKLASCGCDNTVKVWK 191
Q++AS G D +++W+
Sbjct: 469 QRVASGGKDKCLRIWR 484
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 154 (59.3 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 46/152 (30%), Positives = 70/152 (46%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH + V VA GK LA+ S D++++ LS + H T KGHR V ++W+ P
Sbjct: 112 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTE-TPHF-TCKGHRHWVLSISWS-PD- 167
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLS---LACGSSD 125
G LAS +GQ+++W T H + ++W P +A S D
Sbjct: 168 GRKLASGCKNGQILLWDPSTGKQ--VGRTLAGHSKWITGLSWEPLHANPECRYVASSSKD 225
Query: 126 GNISVFTATADGGWDTTRIDQAHPVGVTSVSW 157
G++ ++ TA G + RI H VT + W
Sbjct: 226 GSVRIWDTTA-GRCE--RILTGHTQSVTCLRW 254
Score = 123 (48.4 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 35/118 (29%), Positives = 56/118 (47%)
Query: 8 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPK 67
TGH+ ++ V + +A+AS D SIK+ ++LA+L+GH V+Q+AW+
Sbjct: 369 TGHQALINQVLFSPDSRIVASASFDKSIKL--WDGRTGKYLASLRGHVAAVYQIAWSADS 426
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD 125
+L S S D + +W Q A H V ++ W+P G +A G D
Sbjct: 427 --RLLVSGSSDSTLKVWDVKAQK---LAMDLPGHADEVYAVDWSPD--GQRVASGGKD 477
Score = 69 (29.3 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 22/63 (34%), Positives = 32/63 (50%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
L S D+T+KVW + MD L H+D V +V W+P+ G +AS +D +
Sbjct: 429 LVSGSSDSTLKVWDVKAQKLAMD----LPGHADEVYAVDWSPD-G---QRVASGGKDKCL 480
Query: 238 VIW 240
IW
Sbjct: 481 RIW 483
Score = 40 (19.1 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 176 QKLASCGCDNTVKVWK 191
Q++AS G D +++W+
Sbjct: 469 QRVASGGKDKCLRIWR 484
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 178 (67.7 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 71/239 (29%), Positives = 104/239 (43%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH D+V D++ D GK LA+ S+D +IK+ + + T+ GH V VA P
Sbjct: 148 GHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGF--ECIRTMHGHDHNVSSVA-IMPN- 203
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
G + S S D + +W+ TF H+ V + P++ G +A S+D +
Sbjct: 204 GDHIVSASRDKTIKMWEVATGYC---VKTFTGHREWVRMVR--PNQDGTLIASSSNDQTV 258
Query: 129 SVFT-ATADGGWDTTRIDQAHPVGVTSVSWAPAMA-PGALVGLGLLD-----PVQKLASC 181
V+ AT + + + H V +SWAP A P L G P L S
Sbjct: 259 RVWVVATKECKAEL----REHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSG 314
Query: 182 GCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW 240
D T+K+W + G+ C L H +WVR V P G I S + D T+ IW
Sbjct: 315 SRDKTIKMWDVSIGM----CLMTLVGHDNWVRGVLVHPG-G---KYIVSCADDKTLRIW 365
Score = 130 (50.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 64/245 (26%), Positives = 99/245 (40%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHP-K 67
GH+ V VA+ G + +AS D +IK+ ++ + T GHR W V P +
Sbjct: 190 GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYC--VKTFTGHRE--W-VRMVRPNQ 244
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSL--ACGSS- 124
G+++AS S D V +W + +A +H+ V I+WAP ++ A GS
Sbjct: 245 DGTLIASSSNDQTVRVWVVATKE--CKAE-LREHEHVVECISWAPESAHPTILEATGSET 301
Query: 125 --DGNISVFTATADGG-----WDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQK 177
G F + WD + I V +W G LV G +
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVS-IGMCLMTLVGHDNWVR----GVLVHPG----GKY 352
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
+ SC D T+++W N C L H +V S+ + P + + S D TV
Sbjct: 353 IVSCADDKTLRIWDYKN----KRCTKTLSAHEHFVTSLDFHKTA--PY--VVTGSVDQTV 404
Query: 238 VIWTC 242
+W C
Sbjct: 405 KVWEC 409
Score = 109 (43.4 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 36/131 (27%), Positives = 60/131 (45%)
Query: 2 PAQKIE-TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQ 60
P +K +GH V V + +AS D++IK+ + TLKGH V
Sbjct: 98 PPEKYALSGHRSPVTRVIFHPVFSVIVSASEDATIKV--WDHETGDFERTLKGHTDSVQD 155
Query: 61 VAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLA 120
+++ H G +LASCS D + +W + + T + H +V+S+A P+ G +
Sbjct: 156 ISFDHT--GKLLASCSADMTIKLW---DFQGFECIRTMHGHDHNVSSVAIMPN--GDHIV 208
Query: 121 CGSSDGNISVF 131
S D I ++
Sbjct: 209 SASRDKTIKMW 219
Score = 95 (38.5 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 28/90 (31%), Positives = 44/90 (48%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
+ S D T+K+W++ G C H +WVR V PN + IAS+S D TV
Sbjct: 207 IVSASRDKTIKMWEVATGY----CVKTFTGHREWVRMVR--PNQD--GTLIASSSNDQTV 258
Query: 238 VIWTCAKEGEQWEGRVLKDFKTPVWSVSWS 267
+W A + + E L++ + V +SW+
Sbjct: 259 RVWVVATKECKAE---LREHEHVVECISWA 285
>TAIR|locus:2014210 [details] [associations]
symbol:SEH1H "AT1G64350" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0006626 "protein targeting to mitochondrion" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA] [GO:0043248 "proteasome assembly" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 GO:GO:0005635 Gene3D:2.130.10.10 SUPFAM:SSF50978
KO:K14299 EMBL:AF370222 EMBL:AY059116 IPI:IPI00519579
RefSeq:NP_564830.1 UniGene:At.25592 ProteinModelPortal:Q93VR9
SMR:Q93VR9 STRING:Q93VR9 PRIDE:Q93VR9 EnsemblPlants:AT1G64350.1
GeneID:842741 KEGG:ath:AT1G64350 TAIR:At1g64350 InParanoid:Q93VR9
OMA:WAPNIGR PhylomeDB:Q93VR9 ProtClustDB:CLSN2689020
ArrayExpress:Q93VR9 Genevestigator:Q93VR9 Uniprot:Q93VR9
Length = 326
Score = 175 (66.7 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 68/292 (23%), Positives = 119/292 (40%)
Query: 41 SNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQN----DWTQAH 96
S+S + ++ + ++ W ++G +A DG + IW+E +++ +W
Sbjct: 42 SSSTFSCTSKVRVSESSIVKIVWLPSEYGDAVACVCEDGSLSIWEELSEDAHGLEWKLCK 101
Query: 97 TFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATAD---GGWDTTR-----IDQAH 148
+ + S V + + L + SDG + VF W ID
Sbjct: 102 SMKNKSSQVLDVQFGVSRKSLKMVAAYSDGYLRVFELLNPLELKNWQLQAEFQNVIDSLS 161
Query: 149 PVGV-----TSVSWAPAMA----PGALVGLGLLDPVQKLASCGCDNTVKVWKM--YNGIW 197
+G SVSW P P ++ P L N+ K+W+ + W
Sbjct: 162 TLGKPSSLSASVSWNPMKGEEQEPSFVLAFNSDSP--HL------NSSKIWEFDEAHNRW 213
Query: 198 KMDCFPAL-QMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRV--- 253
AL + D V +++WAPN+G P +A A+ G + IW + EGR+
Sbjct: 214 LAVAELALPEDKGDPVYALSWAPNIGRPYEVVAVATHKG-IGIWHVGLAPDL-EGRLPVK 271
Query: 254 ----LKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVVEP 300
L + VW + W ++G LA ++ V LW+ ++GEW + + +EP
Sbjct: 272 KVSSLSGHQGEVWQMEWDMSGMTLASTGSDGMVKLWQSNLNGEWHEQATLEP 323
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 148 (57.2 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 45/132 (34%), Positives = 64/132 (48%)
Query: 1 MPAQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQ 60
M A+ E HE V+ V + K LA+ S D + K+ LS+ + L +GHR VW
Sbjct: 474 MKARSTERAHEKDVNSVCVSPNDKLLASGSQDRTAKLWALSDL--RLLGVCRGHRRGVWS 531
Query: 61 VAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLA 120
V ++ P IL S S DG V IW + D++ TF H +SV I + G L
Sbjct: 532 VQFS-P-VDQILGSASADGSVRIW---SIQDFSCLKTFEGHDASVLKIIFVSR--GTQLV 584
Query: 121 CGSSDGNISVFT 132
SDG + ++T
Sbjct: 585 SSGSDGLVKLWT 596
Score = 100 (40.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 48/192 (25%), Positives = 82/192 (42%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQ-H-LATLKGHRGPVWQVAWAHP 66
GH DT+ + + G AT + D S+++ + S+ + H +A GH V +A +
Sbjct: 384 GHTDTILSIDVFRKGSMFATCAKDKSVRVWRMDVSSGRVHCVAQGTGHSNAVGSIACSRM 443
Query: 67 KFGSILASCSYDGQVIIWK----EGNQNDWTQA--HTFNDHKSSVNSIAWAPHELGLSLA 120
K + S S D V +W G + T H+ VNS+ +P++ LA
Sbjct: 444 K-QQFVVSGSQDCTVKVWDLPETTGAEGVMMMKARSTERAHEKDVNSVCVSPNDK--LLA 500
Query: 121 CGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLAS 180
GS D ++ A +D + + H GV SV ++P +D + L S
Sbjct: 501 SGSQDRTAKLW-ALSD--LRLLGVCRGHRRGVWSVQFSP------------VDQI--LGS 543
Query: 181 CGCDNTVKVWKM 192
D +V++W +
Sbjct: 544 ASADGSVRIWSI 555
Score = 94 (38.1 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 37/115 (32%), Positives = 52/115 (45%)
Query: 176 QKLASCGCDNTVKVWKM-----YNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIAS 230
Q + S D TVKVW + G+ M + H V SV +PN L +AS
Sbjct: 446 QFVVSGSQDCTVKVWDLPETTGAEGVMMMKARSTERAHEKDVNSVCVSPNDKL----LAS 501
Query: 231 ASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLW 284
SQD T +W A + G V + + VWSV +S +L A A+ +V +W
Sbjct: 502 GSQDRTAKLW--ALSDLRLLG-VCRGHRRGVWSVQFSPVDQILGSASADGSVRIW 553
Score = 81 (33.6 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 20/65 (30%), Positives = 29/65 (44%)
Query: 177 KLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGT 236
+L S G D VK+W + +C L H D V WA + G + + S D T
Sbjct: 582 QLVSSGSDGLVKLWTIKTN----ECVRTLDAHQDKV----WALHGGCRDELMVTGSADST 633
Query: 237 VVIWT 241
+ +WT
Sbjct: 634 ITVWT 638
Score = 78 (32.5 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 45/185 (24%), Positives = 70/185 (37%)
Query: 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFG 69
H V ++ D LAT D +IK+ + H LKG G V V + HP
Sbjct: 105 HSVPVASMSFDCTSTLLATGGCDGTIKLWDVIKQYCTH--NLKGSSGVVHLVEF-HPDIS 161
Query: 70 SI-LASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
+ L S S D + IW + H S V ++A++P G +L D
Sbjct: 162 RLQLFSSSSDCAIRIWDLRSSRC---VCVLESHYSPVTALAFSPD--GHTLVSSGRDKIC 216
Query: 129 SVFTATADGGWDTT--RIDQAHPVGVTSVSWAPAMAPGALVG-LGLLDPVQKLASCGCDN 185
SV WD ++ + PV +V ++ A +G+ L + G
Sbjct: 217 SV--------WDLQEQKVKRTIPV-YEAVEGVVLLSGSADYSEMGVKSDALHLVTAGSKG 267
Query: 186 TVKVW 190
++VW
Sbjct: 268 VLRVW 272
>UNIPROTKB|Q28DW0 [details] [associations]
symbol:ciao1 "Probable cytosolic iron-sulfur protein
assembly protein ciao1" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] [GO:0097361 "CIA complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
HOGENOM:HOG000208901 HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:CR848572 EMBL:BC127279 RefSeq:NP_001016887.1
UniGene:Str.66175 ProteinModelPortal:Q28DW0 STRING:Q28DW0
Ensembl:ENSXETT00000009442 GeneID:549641 KEGG:xtr:549641
Xenbase:XB-GENE-1010751 OMA:EEEYECV Bgee:Q28DW0 Uniprot:Q28DW0
Length = 333
Score = 175 (66.7 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 49/153 (32%), Positives = 72/153 (47%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH+ TV V+ G LA+AS D++ I + + TL+GH V VAWA P
Sbjct: 59 GHQRTVRKVSWSPCGNYLASASFDATTCIWMKKKEEFECITTLEGHENEVKSVAWA-PS- 116
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPH-ELGLSLACGSSDGN 127
GS+LA+CS D V +W+ + ++ N H V + W P+ EL LA S D +
Sbjct: 117 GSLLATCSRDKSVWVWEVDEEEEYECVSVLNSHTQDVKHVVWHPNQEL---LASASYDDS 173
Query: 128 ISVFTATADGGWDTTRIDQAHPVGVTSVSWAPA 160
+ ++ D W + H TS W+ A
Sbjct: 174 VKLYREEEDD-WVCCATLEGH----TSTVWSLA 201
Score = 157 (60.3 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 67/251 (26%), Positives = 104/251 (41%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQH-LATLKGHRGPVWQVAWAHPK 67
GHE+ V VA G LAT S D S+ + + ++ L H V V W HP
Sbjct: 103 GHENEVKSVAWAPSGSLLATCSRDKSVWVWEVDEEEEYECVSVLNSHTQDVKHVVW-HPN 161
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGN 127
+LAS SYD V +++E ++DW T H S+V S+A+ + G LA S D
Sbjct: 162 -QELLASASYDDSVKLYRE-EEDDWVCCATLEGHTSTVWSLAF--DQTGEQLATCSDDKT 217
Query: 128 ISVFT--------ATADGGWDTT-RIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKL 178
+ ++ + +D W + H V V+W GA+
Sbjct: 218 VRIWRQLGTGEQGSKSDPNWKCVCTLTGYHTRTVYDVNWNHLT--GAIA----------- 264
Query: 179 ASCGCDNTVKVWKMYNGIWKMDCFPAL-----QMHSDWVRSVAWAPNLGLPKSTIASASQ 233
+CG D+ V++++ G + +L + H+ V V W P + +AS S
Sbjct: 265 TACG-DDAVRIFEEDPGSDPLQPTFSLTAHMPRAHTQDVNCVTWHPK---EPNLLASCSD 320
Query: 234 DGTVVIWTCAK 244
DG + W K
Sbjct: 321 DGEMAFWRYQK 331
Score = 136 (52.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 55/189 (29%), Positives = 83/189 (43%)
Query: 116 GLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPV 175
G LA D I ++ D + + + H V VSW+P G
Sbjct: 28 GTLLASCGGDRTIRIWGKDGDNWVCKSVLGEGHQRTVRKVSWSPC---------G----- 73
Query: 176 QKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDG 235
LAS D T +W + +C L+ H + V+SVAWAP+ G S +A+ S+D
Sbjct: 74 NYLASASFDATTCIWMKKKE--EFECITTLEGHENEVKSVAWAPS-G---SLLATCSRDK 127
Query: 236 TVVIWTCAKEGEQWEG-RVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQ 293
+V +W +E E++E VL V V W LLA A ++ V L++E D +W
Sbjct: 128 SVWVWEVDEE-EEYECVSVLNSHTQDVKHVVWHPNQELLASASYDDSVKLYREEED-DWV 185
Query: 294 QVSVVEPQT 302
+ +E T
Sbjct: 186 CCATLEGHT 194
Score = 117 (46.2 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 31/103 (30%), Positives = 50/103 (48%)
Query: 59 WQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFND-HKSSVNSIAWAPHELGL 117
W +AW +P G++LASC D + IW + N W + H+ +V ++W+P G
Sbjct: 20 WFLAW-NPS-GTLLASCGGDRTIRIWGKDGDN-WVCKSVLGEGHQRTVRKVSWSP--CGN 74
Query: 118 SLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPA 160
LA S D ++ + T ++ H V SV+WAP+
Sbjct: 75 YLASASFDATTCIWMKKKEEFECITTLE-GHENEVKSVAWAPS 116
Score = 86 (35.3 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 37/124 (29%), Positives = 59/124 (47%)
Query: 174 PVQKL-ASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASAS 232
P Q+L AS D++VK+++ W C L+ H+ V S+A+ G +A+ S
Sbjct: 160 PNQELLASASYDDSVKLYREEEDDWV--CCATLEGHTSTVWSLAF-DQTG---EQLATCS 213
Query: 233 QDGTVVIWTCAKEGEQ-------WEGR-VLKDFKT-PVWSVSWS-LTGNLLAVADANNVT 282
D TV IW GEQ W+ L + T V+ V+W+ LTG + + V
Sbjct: 214 DDKTVRIWRQLGTGEQGSKSDPNWKCVCTLTGYHTRTVYDVNWNHLTGAIATACGDDAVR 273
Query: 283 LWKE 286
+++E
Sbjct: 274 IFEE 277
>UNIPROTKB|G4MUS8 [details] [associations]
symbol:MGG_01677 "Nuclear pore complex subunit"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 EMBL:CM001232
KO:K14299 RefSeq:XP_003714665.1 EnsemblFungi:MGG_01677T0
GeneID:2679619 KEGG:mgr:MGG_01677 Uniprot:G4MUS8
Length = 455
Score = 118 (46.6 bits), Expect = 4.4e-11, Sum P(3) = 4.4e-11
Identities = 26/85 (30%), Positives = 41/85 (48%)
Query: 4 QKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSAS-QHLATLKGHRGPVWQVA 62
Q ++ GH+D V VA + YG R T S D I++ +H H G + ++
Sbjct: 19 QIMKHGHQDLVQAVAFNSYGDRCTTGSVDGKIRVFNRHQDGIWRHCDNWTAHGGEILELQ 78
Query: 63 WAHPK-FGSILASCSYDGQVIIWKE 86
W P + ++LAS DG+ +W E
Sbjct: 79 WLPPTIYPNLLASLGIDGRFKLWAE 103
Score = 78 (32.5 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 22/72 (30%), Positives = 31/72 (43%)
Query: 101 HKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAP- 159
H+ V ++A+ + G GS DG I VF DG W AH + + W P
Sbjct: 25 HQDLVQAVAF--NSYGDRCTTGSVDGKIRVFNRHQDGIWRHCDNWTAHGGEILELQWLPP 82
Query: 160 AMAPGALVGLGL 171
+ P L LG+
Sbjct: 83 TIYPNLLASLGI 94
Score = 76 (31.8 bits), Expect = 4.4e-11, Sum P(3) = 4.4e-11
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 254 LKDFKTPVWSVSWSLTGNLL-AVADANNVTLWKEAVDGEWQQVS 296
L +TPVW V + G +L +V D + L+++ DG W + S
Sbjct: 400 LDSHRTPVWRVGFDDDGQILGSVGDEGRLLLYRQTPDGSWAKSS 443
Score = 66 (28.3 bits), Expect = 4.4e-11, Sum P(3) = 4.4e-11
Identities = 17/33 (51%), Positives = 18/33 (54%)
Query: 205 LQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
+Q H VR VAWAP IASA QDG V
Sbjct: 259 VQGHRGLVRDVAWAPGNIRGYDIIASACQDGFV 291
Score = 60 (26.2 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 17/84 (20%), Positives = 32/84 (38%)
Query: 53 GHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAP 112
GH+ V VA+ +G + S DG++ ++ W + H + + W P
Sbjct: 24 GHQDLVQAVAFN--SYGDRCTTGSVDGKIRVFNRHQDGIWRHCDNWTAHGGEILELQWLP 81
Query: 113 HELGLSLACGSS-DGNISVFTATA 135
+ +L DG ++ A
Sbjct: 82 PTIYPNLLASLGIDGRFKLWAEDA 105
>UNIPROTKB|E1BV27 [details] [associations]
symbol:TBL1X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0003682 GO:GO:0005667
GO:GO:0044212 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045444 GeneTree:ENSGT00690000102024 KO:K04508 CTD:6907
OMA:RAHSVNN EMBL:AADN02017315 EMBL:AADN02017316 EMBL:AADN02017317
EMBL:AADN02017318 EMBL:AADN02017319 EMBL:AADN02017320
EMBL:AADN02017321 EMBL:AADN02017322 EMBL:AADN02017323
EMBL:AADN02017324 IPI:IPI00589153 RefSeq:NP_001153226.1
UniGene:Gga.5909 ProteinModelPortal:E1BV27
Ensembl:ENSGALT00000021808 GeneID:426045 KEGG:gga:426045
NextBio:20827776 Uniprot:E1BV27
Length = 523
Score = 147 (56.8 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 50/170 (29%), Positives = 76/170 (44%)
Query: 54 HRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPH 113
H P V W + + ASCS D + + + G TF H + VN+I W P
Sbjct: 316 HSAPALDVDWQN---NTTFASCSTDMCIHVCRLGCDRP---VKTFQGHTNEVNAIKWDPS 369
Query: 114 ELGLSLACGSSDGNISVFTATADGGWDTTRID-QAHPVGVTSVSWAPAMAPGALVGLGLL 172
G+ LA S D + +++ D T D QAH + ++ W+P G G
Sbjct: 370 --GMLLASCSDDMTLKIWSMKQD----TCVHDLQAHSKEIYTIKWSPT-------GPGTS 416
Query: 173 DPVQK--LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPN 220
+P LAS D+TV++W + G+ C L H + V SVA++P+
Sbjct: 417 NPNSNIMLASASFDSTVRLWDVDRGV----CIHTLTKHQEPVYSVAFSPD 462
Score = 125 (49.1 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 38/136 (27%), Positives = 63/136 (46%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWA---- 64
GH + V+ + D G LA+ S D ++KI + H L+ H ++ + W+
Sbjct: 356 GHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVH--DLQAHSKEIYTIKWSPTGP 413
Query: 65 ---HPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLAC 121
+P +LAS S+D V +W + + HT H+ V S+A++P G LA
Sbjct: 414 GTSNPNSNIMLASASFDSTVRLW---DVDRGVCIHTLTKHQEPVYSVAFSPD--GKYLAS 468
Query: 122 GSSDGNISVFTATADG 137
GS D + ++ T G
Sbjct: 469 GSFDKCVHIWN-TQSG 483
Score = 123 (48.4 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 48/146 (32%), Positives = 66/146 (45%)
Query: 146 QAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMD-CFPA 204
Q H V ++ W P+ G+L LASC D T+K+W M K D C
Sbjct: 355 QGHTNEVNAIKWDPS---------GML-----LASCSDDMTLKIWSM-----KQDTCVHD 395
Query: 205 LQMHSDWVRSVAWAPN---LGLPKSTI--ASASQDGTVVIWTCAKEGEQWEGRVLKDFKT 259
LQ HS + ++ W+P P S I ASAS D TV +W + G L +
Sbjct: 396 LQAHSKEIYTIKWSPTGPGTSNPNSNIMLASASFDSTVRLWDVDR-GVCIH--TLTKHQE 452
Query: 260 PVWSVSWSLTGNLLAVADANN-VTLW 284
PV+SV++S G LA + V +W
Sbjct: 453 PVYSVAFSPDGKYLASGSFDKCVHIW 478
Score = 101 (40.6 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 38/114 (33%), Positives = 50/114 (43%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGL---SNSAS-----QHLATLKGHRGP--- 57
GHE V A + LA+ S DS+ +I L SNS S +H GH P
Sbjct: 176 GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNSGSTQLVLRHCIREGGHDVPSNK 235
Query: 58 -VWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAW 110
V + W G++LA+ SYDG IW E D A T HK + ++ W
Sbjct: 236 DVTSLDWNSD--GTLLATGSYDGFARIWTE----DGNLASTLGQHKGPIFALKW 283
>MGI|MGI:1336172 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0006508 "proteolysis" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0008013 "beta-catenin
binding" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0043627 "response to estrogen stimulus"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045444 "fat cell differentiation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0048545 "response to steroid hormone
stimulus" evidence=IMP] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:1336172 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 GO:GO:0044212 GO:GO:0043627
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045444
GeneTree:ENSGT00690000102024 KO:K04508 HOGENOM:HOG000220902
OrthoDB:EOG412M5M CTD:6907 EMBL:AK030547 EMBL:AK031937
EMBL:AK038674 EMBL:BC043105 EMBL:F38006 IPI:IPI00223056
RefSeq:NP_065626.1 UniGene:Mm.258476 ProteinModelPortal:Q9QXE7
SMR:Q9QXE7 STRING:Q9QXE7 PhosphoSite:Q9QXE7 PaxDb:Q9QXE7
PRIDE:Q9QXE7 Ensembl:ENSMUST00000088217 GeneID:21372 KEGG:mmu:21372
InParanoid:Q9QXE7 NextBio:300588 Bgee:Q9QXE7 CleanEx:MM_TBL1X
Genevestigator:Q9QXE7 GermOnline:ENSMUSG00000025246 Uniprot:Q9QXE7
Length = 527
Score = 142 (55.0 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 45/167 (26%), Positives = 73/167 (43%)
Query: 54 HRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPH 113
H P V W + + ASCS D + + + G TF H + VN+I W P
Sbjct: 320 HSAPALDVDWQN---NTTFASCSTDMCIHVCRLGCDRP---VKTFQGHTNEVNAIKWDPS 373
Query: 114 ELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLD 173
G+ LA S D + +++ D QAH + ++ W+P + ++
Sbjct: 374 --GMLLASCSDDMTLKIWSMKQDA---CVHDLQAHSKEIYTIKWSPTGPATSNPNSNIM- 427
Query: 174 PVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPN 220
LAS D+TV++W + G+ C L H + V SVA++P+
Sbjct: 428 ----LASASFDSTVRLWDVERGV----CIHTLTKHQEPVYSVAFSPD 466
Score = 128 (50.1 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 39/136 (28%), Positives = 63/136 (46%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWA---- 64
GH + V+ + D G LA+ S D ++KI + A H L+ H ++ + W+
Sbjct: 360 GHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVH--DLQAHSKEIYTIKWSPTGP 417
Query: 65 ---HPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLAC 121
+P +LAS S+D V +W + HT H+ V S+A++P G LA
Sbjct: 418 ATSNPNSNIMLASASFDSTVRLW---DVERGVCIHTLTKHQEPVYSVAFSPD--GKYLAS 472
Query: 122 GSSDGNISVFTATADG 137
GS D + ++ T G
Sbjct: 473 GSFDKCVHIWN-TQSG 487
Score = 125 (49.1 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 48/146 (32%), Positives = 66/146 (45%)
Query: 146 QAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMD-CFPA 204
Q H V ++ W P+ G+L LASC D T+K+W M K D C
Sbjct: 359 QGHTNEVNAIKWDPS---------GML-----LASCSDDMTLKIWSM-----KQDACVHD 399
Query: 205 LQMHSDWVRSVAWAPN---LGLPKSTI--ASASQDGTVVIWTCAKEGEQWEGRVLKDFKT 259
LQ HS + ++ W+P P S I ASAS D TV +W + G L +
Sbjct: 400 LQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWD-VERGVCIH--TLTKHQE 456
Query: 260 PVWSVSWSLTGNLLAVADANN-VTLW 284
PV+SV++S G LA + V +W
Sbjct: 457 PVYSVAFSPDGKYLASGSFDKCVHIW 482
Score = 97 (39.2 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 37/114 (32%), Positives = 49/114 (42%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGL---SNSAS-----QHLATLKGHRGP--- 57
GHE V A + LA+ S DS+ +I L SN S +H GH P
Sbjct: 180 GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNK 239
Query: 58 -VWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAW 110
V + W G++LA+ SYDG IW E D A T HK + ++ W
Sbjct: 240 DVTSLDWNSD--GTLLATGSYDGFARIWTE----DGNLASTLGQHKGPIFALKW 287
>RGD|1563868 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005876 "spindle microtubule"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0008013 "beta-catenin binding" evidence=ISO]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019904 "protein domain
specific binding" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0043627 "response to
estrogen stimulus" evidence=IEA;ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO] [GO:0045444 "fat
cell differentiation" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048545
"response to steroid hormone stimulus" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0000118 "histone deacetylase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:1563868
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
KO:K04508 EMBL:CH473966 CTD:6907 RefSeq:NP_001100434.1
UniGene:Rn.107002 SMR:G3V6G5 Ensembl:ENSRNOT00000004901
GeneID:302711 KEGG:rno:302711 NextBio:650027 Uniprot:G3V6G5
Length = 527
Score = 142 (55.0 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 45/167 (26%), Positives = 73/167 (43%)
Query: 54 HRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPH 113
H P V W + + ASCS D + + + G TF H + VN+I W P
Sbjct: 320 HSAPALDVDWQN---NTTFASCSTDMCIHVCRLGCDRP---VKTFQGHTNEVNAIKWDPS 373
Query: 114 ELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLD 173
G+ LA S D + +++ D QAH + ++ W+P + ++
Sbjct: 374 --GMLLASCSDDMTLKIWSMKQDA---CVHDLQAHSKEIYTIKWSPTGPATSNPNSNIM- 427
Query: 174 PVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPN 220
LAS D+TV++W + G+ C L H + V SVA++P+
Sbjct: 428 ----LASASFDSTVRLWDVERGV----CIHTLTKHQEPVYSVAFSPD 466
Score = 128 (50.1 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 39/136 (28%), Positives = 63/136 (46%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWA---- 64
GH + V+ + D G LA+ S D ++KI + A H L+ H ++ + W+
Sbjct: 360 GHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVH--DLQAHSKEIYTIKWSPTGP 417
Query: 65 ---HPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLAC 121
+P +LAS S+D V +W + HT H+ V S+A++P G LA
Sbjct: 418 ATSNPNSNIMLASASFDSTVRLW---DVERGVCIHTLTKHQEPVYSVAFSPD--GKYLAS 472
Query: 122 GSSDGNISVFTATADG 137
GS D + ++ T G
Sbjct: 473 GSFDKCVHIWN-TQSG 487
Score = 125 (49.1 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 48/146 (32%), Positives = 66/146 (45%)
Query: 146 QAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMD-CFPA 204
Q H V ++ W P+ G+L LASC D T+K+W M K D C
Sbjct: 359 QGHTNEVNAIKWDPS---------GML-----LASCSDDMTLKIWSM-----KQDACVHD 399
Query: 205 LQMHSDWVRSVAWAPN---LGLPKSTI--ASASQDGTVVIWTCAKEGEQWEGRVLKDFKT 259
LQ HS + ++ W+P P S I ASAS D TV +W + G L +
Sbjct: 400 LQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWD-VERGVCIH--TLTKHQE 456
Query: 260 PVWSVSWSLTGNLLAVADANN-VTLW 284
PV+SV++S G LA + V +W
Sbjct: 457 PVYSVAFSPDGKYLASGSFDKCVHIW 482
Score = 97 (39.2 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 37/114 (32%), Positives = 49/114 (42%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGL---SNSAS-----QHLATLKGHRGP--- 57
GHE V A + LA+ S DS+ +I L SN S +H GH P
Sbjct: 180 GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNK 239
Query: 58 -VWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAW 110
V + W G++LA+ SYDG IW E D A T HK + ++ W
Sbjct: 240 DVTSLDWNSD--GTLLATGSYDGFARIWTE----DGNLASTLGQHKGPIFALKW 287
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 174 (66.3 bits), Expect = 9.3e-11, P = 9.3e-11
Identities = 70/239 (29%), Positives = 105/239 (43%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH D+V D++ D GK LA+ S+D +IK+ + + T+ GH V VA P
Sbjct: 148 GHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGF--ECIRTMHGHDHNVSSVA-IMPN- 203
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
G + S S D + +W+ TF H+ V + P++ G LA S+D +
Sbjct: 204 GDHIVSASRDKTMKMWEVATGYC---VKTFTGHREWVRMVR--PNQDGTLLASCSNDQTV 258
Query: 129 SVFT-ATADGGWDTTRIDQAHPVGVTSVSWAPAMA-PGALVGLGLLD-----PVQKLASC 181
V+ AT + + + H V +SWAP A P G + P L S
Sbjct: 259 RVWVVATKECKAEL----REHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSG 314
Query: 182 GCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW 240
D T+K+W + G+ C L H +WVR V + P G + S + D T+ IW
Sbjct: 315 SRDKTIKMWDISTGM----CLMTLVGHDNWVRGVLFHPG-G---RFVVSCADDKTLRIW 365
Score = 139 (54.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 64/241 (26%), Positives = 102/241 (42%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHP-K 67
GH+ V VA+ G + +AS D ++K+ ++ + T GHR W V P +
Sbjct: 190 GHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYC--VKTFTGHRE--W-VRMVRPNQ 244
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELG--LSLACGSSD 125
G++LASCS D V +W + +A +H+ V I+WAP +S A GS +
Sbjct: 245 DGTLLASCSNDQTVRVWVVATKE--CKAE-LREHEHVVECISWAPESAHPTISEATGSEN 301
Query: 126 ---GNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQK-LASC 181
G F + G D T + + T + + V L P + + SC
Sbjct: 302 KKSGKPGPFLLS--GSRDKTI--KMWDIS-TGMCLMTLVGHDNWVRGVLFHPGGRFVVSC 356
Query: 182 GCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWT 241
D T+++W N C L H +V S+ + + P + + S D TV +W
Sbjct: 357 ADDKTLRIWDYKN----KRCMKTLSAHEHFVTSLDF--HKASPY--VVTGSVDQTVKVWE 408
Query: 242 C 242
C
Sbjct: 409 C 409
Score = 101 (40.6 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 35/131 (26%), Positives = 60/131 (45%)
Query: 2 PAQKIE-TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQ 60
P +K +GH V V + +AS D++IK+ A TLKGH V
Sbjct: 98 PPEKYALSGHRSPVTRVIFHPVFSLMVSASEDATIKV--WDYEAGDFERTLKGHTDSVQD 155
Query: 61 VAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLA 120
+++ + G +LASCS D + +W + + T + H +V+S+A P+ G +
Sbjct: 156 ISF--DQTGKLLASCSADMTIKLW---DFQGFECIRTMHGHDHNVSSVAIMPN--GDHIV 208
Query: 121 CGSSDGNISVF 131
S D + ++
Sbjct: 209 SASRDKTMKMW 219
Score = 90 (36.7 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 27/90 (30%), Positives = 43/90 (47%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
+ S D T+K+W++ G C H +WVR V PN + +AS S D TV
Sbjct: 207 IVSASRDKTMKMWEVATGY----CVKTFTGHREWVRMVR--PNQD--GTLLASCSNDQTV 258
Query: 238 VIWTCAKEGEQWEGRVLKDFKTPVWSVSWS 267
+W A + + E L++ + V +SW+
Sbjct: 259 RVWVVATKECKAE---LREHEHVVECISWA 285
>UNIPROTKB|Q32SG6 [details] [associations]
symbol:Q32SG6 "Protein HIRA" species:4577 "Zea mays"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR011494 InterPro:IPR015943
Pfam:PF00400 Pfam:PF07569 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006351
GO:GO:0016568 KO:K11293 EMBL:AY940678 RefSeq:NP_001105835.1
UniGene:Zm.22931 ProteinModelPortal:Q32SG6 IntAct:Q32SG6
GeneID:732736 KEGG:zma:732736 Gramene:Q32SG6 Uniprot:Q32SG6
Length = 964
Score = 179 (68.1 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 66/205 (32%), Positives = 88/205 (42%)
Query: 78 DGQVIIW------KEGNQNDWTQA--HTFNDHKSSVNSIAWAPHELGLSLACGSSDGNIS 129
D +V IW K+ ND Q T DH SVN + WA H G LA GS D I
Sbjct: 34 DQKVRIWSMESVHKDNTNNDSKQRLLATLRDHFGSVNCVRWAKH--GRYLASGSDDQVIL 91
Query: 130 VFTATADGGWDTTRIDQAHPVGVTS----VSWAPAMAPGALVGLGLLDPVQKLASCGCDN 185
+ A G T+ P + ++W A +V L LAS DN
Sbjct: 92 IHERKAGSG--TSEFGSGEPPDAENWKVIMTWRGHTAD--VVDLSWSPDDSTLASGSLDN 147
Query: 186 TVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCA-- 243
T+ +W M NGI C L+ H+ V+ V W P +G S IAS S D TV+IW +
Sbjct: 148 TIHIWNMNNGI----CTAVLRGHTSLVKGVTWDP-IG---SFIASQSDDKTVMIWRTSDW 199
Query: 244 KEGEQWEGRVLKDFKTPVWS-VSWS 267
+ EG K + + ++WS
Sbjct: 200 SLAHKTEGHWTKSLGSTFFRRLAWS 224
Score = 123 (48.4 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 65/237 (27%), Positives = 99/237 (41%)
Query: 10 HEDT-VHDVAMDFYGKRLATASSDSSIKIIGL--------SNSASQHL-ATLKGHRGPVW 59
HE + + + G R AT D ++I + +N + Q L ATL+ H G V
Sbjct: 11 HEGLQIFSIDIQTGGLRFATGGGDQKVRIWSMESVHKDNTNNDSKQRLLATLRDHFGSVN 70
Query: 60 QVAWAHPKFGSILASCSYDGQVIIWKE------------GNQND---WTQAHTFNDHKSS 104
V WA K G LAS S D QVI+ E G D W T+ H +
Sbjct: 71 CVRWA--KHGRYLASGS-DDQVILIHERKAGSGTSEFGSGEPPDAENWKVIMTWRGHTAD 127
Query: 105 VNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPG 164
V ++W+P + +LA GS D I ++ +G T + + H V V+W P G
Sbjct: 128 VVDLSWSPDDS--TLASGSLDNTIHIWNMN-NG--ICTAVLRGHTSLVKGVTWDPI---G 179
Query: 165 ALVGLGLLDPVQKLASCGCDNTVKVWKM--YNGIWKMDCFPALQMHSDWVRSVAWAP 219
+ + AS D TV +W+ ++ K + + S + R +AW+P
Sbjct: 180 SFI-----------ASQSDDKTVMIWRTSDWSLAHKTEGHWTKSLGSTFFRRLAWSP 225
Score = 118 (46.6 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 38/110 (34%), Positives = 54/110 (49%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH V D++ LA+ S D++I I ++N A L+GH V V W P
Sbjct: 123 GHTADVVDLSWSPDDSTLASGSLDNTIHIWNMNNGICT--AVLRGHTSLVKGVTW-DP-I 178
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDH-KSSVNS-----IAWAP 112
GS +AS S D V+IW+ +DW+ AH H S+ S +AW+P
Sbjct: 179 GSFIASQSDDKTVMIWRT---SDWSLAHKTEGHWTKSLGSTFFRRLAWSP 225
Score = 67 (28.6 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 19/61 (31%), Positives = 25/61 (40%)
Query: 211 WVRSVAWAPNLGL-PKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLT 269
W + P P + IA SQD T+ +WT A + R F V +SWS
Sbjct: 291 WANGASKTPTKEQQPYNVIAIGSQDRTITVWTTASARPLFVARHF--FSQSVVDLSWSPD 348
Query: 270 G 270
G
Sbjct: 349 G 349
>UNIPROTKB|A4R7U3 [details] [associations]
symbol:CIA1 "Probable cytosolic iron-sulfur protein
assembly protein 1" species:242507 "Magnaporthe oryzae 70-15"
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CM001234 OrthoDB:EOG4CVKH5 RefSeq:XP_003716845.1
ProteinModelPortal:A4R7U3 STRING:A4R7U3 GeneID:2676736
KEGG:mgr:MGG_03150 Uniprot:A4R7U3
Length = 446
Score = 162 (62.1 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 47/164 (28%), Positives = 74/164 (45%)
Query: 88 NQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATA----DGGWDTTR 143
N +DW H++ + S A++P G LA S D +I ++ D W+T
Sbjct: 131 NDDDWEFTLVLEGHENEIKSAAFSPS--GQYLATCSRDKSIWIWEDVGANEGDDEWETVA 188
Query: 144 IDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMY-NGIWKMDCF 202
+ H V V+W P + PG + P LAS D+T+++W+ +G W C
Sbjct: 189 VLTEHDGDVKCVAWCPDV-PGR--NISSYSP-DVLASASYDDTIRIWREDGDGEWA--CV 242
Query: 203 PALQMHSDWVRSVAWAPNLGLPK-STIASASQDGTVVIWTCAKE 245
L+ HS V V W P + K + S S D T+ +WT ++
Sbjct: 243 AVLEGHSSTVWGVQWEPKVDNTKFPRLISWSADKTIRVWTLEQD 286
Score = 141 (54.7 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 42/154 (27%), Positives = 63/154 (40%)
Query: 51 LKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKE--GNQND--WTQAHTFNDHKSSVN 106
L+GH + A++ P G LA+CS D + IW++ N+ D W +H V
Sbjct: 141 LEGHENEIKSAAFS-PS-GQYLATCSRDKSIWIWEDVGANEGDDEWETVAVLTEHDGDVK 198
Query: 107 SIAWAPHELGLS--------LACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWA 158
+AW P G + LA S D I ++ DG W + + H V V W
Sbjct: 199 CVAWCPDVPGRNISSYSPDVLASASYDDTIRIWREDGDGEWACVAVLEGHSSTVWGVQWE 258
Query: 159 PAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKM 192
P + P +L S D T++VW +
Sbjct: 259 PKVDNTKF-------P--RLISWSADKTIRVWTL 283
Score = 140 (54.3 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 45/144 (31%), Positives = 60/144 (41%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKI---IGLSNSASQH--LATLKGHRGPVWQVAW 63
GHE+ + A G+ LAT S D SI I +G + + +A L H G V VAW
Sbjct: 143 GHENEIKSAAFSPSGQYLATCSRDKSIWIWEDVGANEGDDEWETVAVLTEHDGDVKCVAW 202
Query: 64 AHPKFG--------SILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHEL 115
G +LAS SYD + IW+E +W H S+V + W P
Sbjct: 203 CPDVPGRNISSYSPDVLASASYDDTIRIWREDGDGEWACVAVLEGHSSTVWGVQWEPKVD 262
Query: 116 GLS---LACGSSDGNISVFTATAD 136
L S+D I V+T D
Sbjct: 263 NTKFPRLISWSADKTIRVWTLEQD 286
Score = 51 (23.0 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 247 EQWE-GRVLKDFKT-PVWSVSWSLTGNLLAVADANNVTLWKE 286
E+W VL T ++S SWS G + + ++ +++E
Sbjct: 319 EEWRCSAVLPSVHTRDIYSASWSKNGRVASTGSDGSILVYEE 360
Score = 47 (21.6 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 14/74 (18%), Positives = 30/74 (40%)
Query: 125 DGNISVFTATADGGWDTT-RIDQAH-PVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCG 182
+G+ +V + W ++ H P + ++W G + G+ + L + G
Sbjct: 375 EGDSNVIVKPGEAKWKVLGKVSDGHGPYEINHITWCSRYDAG-VEQRGV---EEMLVTTG 430
Query: 183 CDNTVKVWKMYNGI 196
D V+ W++ I
Sbjct: 431 DDGIVQAWQLKESI 444
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 151 (58.2 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 46/152 (30%), Positives = 72/152 (47%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH + V VA GK LA+ S D++++ LS + H T +GHR V ++W+ P
Sbjct: 113 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTE-TPHF-TCQGHRHWVLSISWS-PD- 168
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLS---LACGSSD 125
G LAS +GQ+++W +A T H + +++W P +A S D
Sbjct: 169 GKKLASGCKNGQILLWDPSTGKQVGRALT--GHSKWITALSWEPLHANPECRYVASSSKD 226
Query: 126 GNISVFTATADGGWDTTRIDQAHPVGVTSVSW 157
G++ V+ TA G + T H VT + W
Sbjct: 227 GSVRVWDTTA-GRCERTLT--GHAQSVTCLRW 255
Score = 124 (48.7 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 35/118 (29%), Positives = 56/118 (47%)
Query: 8 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPK 67
TGH+ ++ V + +A+AS D SIK+ ++LA+L+GH V+Q+AW+
Sbjct: 370 TGHQALINQVVFSPDSRVIASASFDKSIKL--WDGRTGKYLASLRGHVAAVYQIAWSADS 427
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD 125
+L S S D + +W Q T H V ++ W+P G +A G D
Sbjct: 428 --RLLVSGSSDSTLKVWDVKAQKLSTD---LPGHADEVYAVDWSPD--GQRVASGGKD 478
Score = 114 (45.2 bits), Expect = 0.00089, P = 0.00089
Identities = 37/118 (31%), Positives = 56/118 (47%)
Query: 176 QKLASCGCDN-TVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKST-IASASQ 233
+KLAS GC N + +W G AL HS W+ +++W P P+ +AS+S+
Sbjct: 170 KKLAS-GCKNGQILLWDPSTG---KQVGRALTGHSKWITALSWEPLHANPECRYVASSSK 225
Query: 234 DGTVVIW-TCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANNVTLWKEAVDG 290
DG+V +W T A E R L V + W G L + + + +W+ A DG
Sbjct: 226 DGSVRVWDTTAGRCE----RTLTGHAQSVTCLRWGGDGLLYSASQDRTIKVWR-AHDG 278
Score = 64 (27.6 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
L S D+T+KVW + D L H+D V +V W+P+ G +AS +D +
Sbjct: 430 LVSGSSDSTLKVWDVKAQKLSTD----LPGHADEVYAVDWSPD-G---QRVASGGKDKCL 481
Query: 238 VIW 240
IW
Sbjct: 482 RIW 484
Score = 40 (19.1 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 176 QKLASCGCDNTVKVWK 191
Q++AS G D +++W+
Sbjct: 470 QRVASGGKDKCLRIWR 485
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 150 (57.9 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 45/152 (29%), Positives = 69/152 (45%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH + V VA GK LA+ S D++++ LS + H T +GHR V ++W+ P
Sbjct: 63 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTE-TPHF-TCQGHRHWVLSISWS-PD- 118
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLS---LACGSSD 125
G LAS +GQ+++W H + ++W P +A S D
Sbjct: 119 GKTLASGCKNGQILLWDPSTGKQ--VGRVLAGHSKWITGLSWEPLHANPECRYMASSSKD 176
Query: 126 GNISVFTATADGGWDTTRIDQAHPVGVTSVSW 157
G++ V+ TA G + RI H VT + W
Sbjct: 177 GSVRVWDTTA-GRCE--RILTGHTQSVTCLRW 205
Score = 124 (48.7 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 35/118 (29%), Positives = 56/118 (47%)
Query: 8 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPK 67
TGH+ ++ V + +A+AS D SIK+ ++LA+L+GH V+Q+AW+
Sbjct: 320 TGHQALINQVLFSPDSRIIASASFDKSIKL--WDGRTGKYLASLRGHVAAVYQIAWSADS 377
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD 125
+L S S D + +W Q A H V ++ W+P G +A G D
Sbjct: 378 --RLLVSGSSDSTLKVWDVKAQK---LAADLPGHADEVYAVDWSPD--GQRVASGGKD 428
Score = 120 (47.3 bits), Expect = 0.00016, P = 0.00016
Identities = 50/170 (29%), Positives = 74/170 (43%)
Query: 49 ATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSI 108
++L+GH V VA++ P G LAS S D V W + T T H+ V SI
Sbjct: 59 SSLEGHSEAVISVAFS-PT-GKYLASGSGDTTVRFWDLSTE---TPHFTCQGHRHWVLSI 113
Query: 109 AWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVG 168
+W+P G +LA G +G I ++ + G R+ H +T +SW P A
Sbjct: 114 SWSPD--GKTLASGCKNGQILLWDPST--GKQVGRVLAGHSKWITGLSWEPLHA------ 163
Query: 169 LGLLDP-VQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAW 217
+P + +AS D +V+VW G C L H+ V + W
Sbjct: 164 ----NPECRYMASSSKDGSVRVWDTTAG----RCERILTGHTQSVTCLRW 205
Score = 63 (27.2 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
L S D+T+KVW + D L H+D V +V W+P+ G +AS +D +
Sbjct: 380 LVSGSSDSTLKVWDVKAQKLAAD----LPGHADEVYAVDWSPD-G---QRVASGGKDKCL 431
Query: 238 VIW 240
IW
Sbjct: 432 RIW 434
Score = 62 (26.9 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 28/110 (25%), Positives = 51/110 (46%)
Query: 176 QKLASCGCDNTVKVWKMYNGIWKMDCFPALQM--HSDWVRSVAWAPNLGLPKSTIASASQ 233
++L S D T+ +W D P +M H + V ++P+ + IASAS
Sbjct: 293 ERLVSGSDDFTLFMWSPAE-----DKKPLARMTGHQALINQVLFSPDSRI----IASASF 343
Query: 234 DGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANNVTL 283
D ++ +W + G+ L+ V+ ++WS LL V+ +++ TL
Sbjct: 344 DKSIKLWD-GRTGKYLAS--LRGHVAAVYQIAWSADSRLL-VSGSSDSTL 389
Score = 40 (19.1 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 176 QKLASCGCDNTVKVWK 191
Q++AS G D +++W+
Sbjct: 420 QRVASGGKDKCLRIWR 435
>POMBASE|SPAC806.02c [details] [associations]
symbol:SPAC806.02c "Par A family ATPase/WD repeat iron
cluster assembly fusion protein (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0016226
"iron-sulfur cluster assembly" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0043234 "protein complex" evidence=NAS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051539 "4 iron,
4 sulfur cluster binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR000808 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS01215 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC806.02c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0043234 EMBL:CU329670 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
eggNOG:COG2319 GO:GO:0016887 GO:GO:0051539 GO:GO:0016226
InterPro:IPR019591 Pfam:PF10609 PIR:T39094 RefSeq:NP_592852.1
ProteinModelPortal:Q9UT57 EnsemblFungi:SPAC806.02c.1 GeneID:2542122
KEGG:spo:SPAC806.02c OrthoDB:EOG4XKZGD NextBio:20803194
Uniprot:Q9UT57
Length = 608
Score = 174 (66.3 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 69/262 (26%), Positives = 103/262 (39%)
Query: 48 LATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFND-HKSSVN 106
+ T+ GH G +W VA AHP + A+ S D V I+ N N + H + H S+
Sbjct: 283 ITTISGHTGRLWSVA-AHPML-PLFATSSQDKSVRIY---NSNTYNLVHVIDGFHTRSIR 337
Query: 107 SIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGAL 166
+AW P E + LA S D +S+ D W+ T + H V ++W+ G
Sbjct: 338 RVAWRPIERPV-LAVASFDSVVSI-NEKIDDDWECTAALEGHENEVKCIAWS---CNG-- 390
Query: 167 VGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKS 226
LA+C D +V +W+ + DC LQ H+ V+ V W P L S
Sbjct: 391 ---------NYLATCSRDKSVWIWEATEDD-EFDCLAVLQEHTQDVKVVTWHPTEDLLVS 440
Query: 227 -----TIASASQDGTVVIWTCAKEGEQ---W------EGRVLKDFKTPVWSVSWSLTGNL 272
+I DG TC +G W G L W +
Sbjct: 441 GSYDNSICFWRDDGDDWALTCQLQGHTNTVWALAFSPNGNTLASADNDGNVFLWIKISSN 500
Query: 273 LAVADANNVTLWKEAVDGEWQQ 294
VA ++ + + A+ EW+Q
Sbjct: 501 EDVATIDSTNILRPALQEEWKQ 522
Score = 160 (61.4 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 61/244 (25%), Positives = 103/244 (42%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKII-GLSNSASQHLATLKGHRGPVWQVAWAHPK 67
GHE+ V +A G LAT S D S+ I + LA L+ H V V W HP
Sbjct: 376 GHENEVKCIAWSCNGNYLATCSRDKSVWIWEATEDDEFDCLAVLQEHTQDVKVVTW-HPT 434
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGN 127
+L S SYD + W++ +DW H ++V ++A++P+ G +LA +DGN
Sbjct: 435 -EDLLVSGSYDNSICFWRDDG-DDWALTCQLQGHTNTVWALAFSPN--GNTLASADNDGN 490
Query: 128 ISVFTATADGGWDTTRIDQAHPVG-VTSVSWA-----PAMAPGALVGLGLLDPVQKLASC 181
+ ++ + D ID + + W P + GA+ + ++ L S
Sbjct: 491 VFLWIKISSNE-DVATIDSTNILRPALQEEWKQQTSLPHIHKGAVYTISWMNDAT-LCSA 548
Query: 182 GCDNTVKVW---KMYNGIWKMDCFPALQMHSDW-VRSVAWAPNLGLPKSTIASASQDGTV 237
G D + V+ K +W + + H + + S+ + L + S DG
Sbjct: 549 GGDGKIVVYQREKHDEALWHV-AYEQDHAHGVYEINSLEY-----LRDDRLLSGGDDGEC 602
Query: 238 VIWT 241
+W+
Sbjct: 603 RVWS 606
Score = 155 (59.6 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 72/273 (26%), Positives = 111/273 (40%)
Query: 26 LATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWK 85
LA AS DS + I + + A L+GH V +AW+ G+ LA+CS D V IW+
Sbjct: 349 LAVASFDSVVSINEKIDDDWECTAALEGHENEVKCIAWSCN--GNYLATCSRDKSVWIWE 406
Query: 86 EGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRID 145
+++ +H V + W P E L L GS D +I + D W T
Sbjct: 407 ATEDDEFDCLAVLQEHTQDVKVVTWHPTE-DL-LVSGSYDNSICFWRDDGDD-WALTCQL 463
Query: 146 QAHPVGVTSVSWAPAMAPGA--LVGL---GLLDPVQKLAS----CGCDNTVKVWKMYNGI 196
Q H T+ WA A +P L G + K++S D+T +
Sbjct: 464 QGH----TNTVWALAFSPNGNTLASADNDGNVFLWIKISSNEDVATIDSTNILRPALQEE 519
Query: 197 WKMDC-FPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQ-WEGRVL 254
WK P +H V +++W + +T+ SA DG +V++ K E W
Sbjct: 520 WKQQTSLP--HIHKGAVYTISW-----MNDATLCSAGGDGKIVVYQREKHDEALWHVAYE 572
Query: 255 KDFKTPVW---SVSWSLTGNLLAVADANNVTLW 284
+D V+ S+ + LL+ D +W
Sbjct: 573 QDHAHGVYEINSLEYLRDDRLLSGGDDGECRVW 605
Score = 147 (56.8 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 48/154 (31%), Positives = 72/154 (46%)
Query: 8 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLA-TLKG-HRGPVWQVAWAH 65
+GH + VA AT+S D S++I NS + +L + G H + +VAW
Sbjct: 287 SGHTGRLWSVAAHPMLPLFATSSQDKSVRIY---NSNTYNLVHVIDGFHTRSIRRVAW-R 342
Query: 66 PKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD 125
P +LA S+D V I E +DW H++ V IAW+ + G LA S D
Sbjct: 343 PIERPVLAVASFDSVVSI-NEKIDDDWECTAALEGHENEVKCIAWSCN--GNYLATCSRD 399
Query: 126 GNISVFTATADGGWDTTRIDQAHPVGVTSVSWAP 159
++ ++ AT D +D + Q H V V+W P
Sbjct: 400 KSVWIWEATEDDEFDCLAVLQEHTQDVKVVTWHP 433
>UNIPROTKB|Q4R8H1 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9541 "Macaca fascicularis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0005876 "spindle microtubule" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0007605 "sensory
perception of sound" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0006351 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 HSSP:P16649 EMBL:AB168481
ProteinModelPortal:Q4R8H1 Uniprot:Q4R8H1
Length = 569
Score = 129 (50.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 44/167 (26%), Positives = 72/167 (43%)
Query: 54 HRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPH 113
H P V W + ASCS D + + + G TF H + VN+I W P
Sbjct: 362 HSAPALDVDWQN---NMTFASCSTDMCIHVCRLGCDRP---VKTFQGHTNEVNAIKWDPS 415
Query: 114 ELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLD 173
G+ LA S D + +++ + QAH + ++ W+P + ++
Sbjct: 416 --GMLLASCSDDMTLKIWSMKQEVCIHDL---QAHNKEIYTIKWSPTGPATSNPNSNIM- 469
Query: 174 PVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPN 220
LAS D+TV++W + G+ C L H + V SVA++P+
Sbjct: 470 ----LASASFDSTVRLWDIERGV----CTHTLTKHQEPVYSVAFSPD 508
Score = 125 (49.1 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 39/136 (28%), Positives = 64/136 (47%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWA---- 64
GH + V+ + D G LA+ S D ++KI + H L+ H ++ + W+
Sbjct: 402 GHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIH--DLQAHNKEIYTIKWSPTGP 459
Query: 65 ---HPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLAC 121
+P +LAS S+D V +W + + T HT H+ V S+A++P G LA
Sbjct: 460 ATSNPNSNIMLASASFDSTVRLW-DIERGVCT--HTLTKHQEPVYSVAFSPD--GRYLAS 514
Query: 122 GSSDGNISVFTATADG 137
GS D + ++ T G
Sbjct: 515 GSFDKCVHIWN-TQSG 529
Score = 122 (48.0 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 45/145 (31%), Positives = 65/145 (44%)
Query: 146 QAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPAL 205
Q H V ++ W P+ G+L LASC D T+K+W M + C L
Sbjct: 401 QGHTNEVNAIKWDPS---------GML-----LASCSDDMTLKIWSMKQEV----CIHDL 442
Query: 206 QMHSDWVRSVAWAPN---LGLPKSTI--ASASQDGTVVIWTCAKEGEQWEGRVLKDFKTP 260
Q H+ + ++ W+P P S I ASAS D TV +W + G L + P
Sbjct: 443 QAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIER-GVCTH--TLTKHQEP 499
Query: 261 VWSVSWSLTGNLLAVADANN-VTLW 284
V+SV++S G LA + V +W
Sbjct: 500 VYSVAFSPDGRYLASGSFDKCVHIW 524
Score = 97 (39.2 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 39/124 (31%), Positives = 54/124 (43%)
Query: 1 MPAQK--IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGL---SNSAS-----QHLAT 50
+P+ K + GHE V A + LA+ S DS+ +I L SN S +H
Sbjct: 212 IPSSKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIR 271
Query: 51 LKGHRGP----VWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVN 106
GH P V + W G++LA+ SYDG IW E D A T HK +
Sbjct: 272 EGGHDVPSNKDVTSLDWNTN--GTLLATGSYDGFARIWTE----DGNLASTLGQHKGPIF 325
Query: 107 SIAW 110
++ W
Sbjct: 326 ALKW 329
>UNIPROTKB|O60907 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IMP] [GO:0003714 "transcription
corepressor activity" evidence=IGI;IDA] [GO:0042393 "histone
binding" evidence=IDA] [GO:0017053 "transcriptional repressor
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007605 "sensory
perception of sound" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] [GO:0044255
"cellular lipid metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Reactome:REACT_111102
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0007219 GO:GO:0044255 GO:GO:0006351 GO:GO:0000122
GO:GO:0044212 GO:GO:0007605 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AC003036
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M
EMBL:Y12781 EMBL:AK289409 EMBL:AK290962 EMBL:BC032708 EMBL:BC052304
IPI:IPI00218132 IPI:IPI00640917 RefSeq:NP_001132938.1
RefSeq:NP_001132939.1 RefSeq:NP_001132940.1 RefSeq:NP_005638.1
UniGene:Hs.495656 PDB:2XTC PDB:2XTD PDB:2XTE PDBsum:2XTC
PDBsum:2XTD PDBsum:2XTE ProteinModelPortal:O60907 SMR:O60907
IntAct:O60907 STRING:O60907 PhosphoSite:O60907 PaxDb:O60907
PRIDE:O60907 Ensembl:ENST00000217964 Ensembl:ENST00000380961
Ensembl:ENST00000407597 Ensembl:ENST00000424279
Ensembl:ENST00000536365 GeneID:6907 KEGG:hsa:6907 UCSC:uc004csq.4
CTD:6907 GeneCards:GC0XP009431 HGNC:HGNC:11585 HPA:CAB005363
MIM:300196 neXtProt:NX_O60907 PharmGKB:PA36349 InParanoid:O60907
OMA:RAHSVNN PhylomeDB:O60907 ChiTaRS:TBL1X EvolutionaryTrace:O60907
GenomeRNAi:6907 NextBio:27011 ArrayExpress:O60907 Bgee:O60907
CleanEx:HS_TBL1X Genevestigator:O60907 GermOnline:ENSG00000101849
Uniprot:O60907
Length = 577
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 44/167 (26%), Positives = 73/167 (43%)
Query: 54 HRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPH 113
H P V W + + ASCS D + + + G TF H + VN+I W P
Sbjct: 370 HSAPALDVDWQN---NTTFASCSTDMCIHVCRLGCDRP---VKTFQGHTNEVNAIKWDPS 423
Query: 114 ELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLD 173
G+ LA S D + +++ + QAH + ++ W+P + ++
Sbjct: 424 --GMLLASCSDDMTLKIWSMKQEVCIHDL---QAHNKEIYTIKWSPTGPATSNPNSNIM- 477
Query: 174 PVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPN 220
LAS D+TV++W + G+ C L H + V SVA++P+
Sbjct: 478 ----LASASFDSTVRLWDIERGV----CTHTLTKHQEPVYSVAFSPD 516
Score = 125 (49.1 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 39/136 (28%), Positives = 64/136 (47%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWA---- 64
GH + V+ + D G LA+ S D ++KI + H L+ H ++ + W+
Sbjct: 410 GHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIH--DLQAHNKEIYTIKWSPTGP 467
Query: 65 ---HPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLAC 121
+P +LAS S+D V +W + + T HT H+ V S+A++P G LA
Sbjct: 468 ATSNPNSNIMLASASFDSTVRLW-DIERGVCT--HTLTKHQEPVYSVAFSPD--GKYLAS 522
Query: 122 GSSDGNISVFTATADG 137
GS D + ++ T G
Sbjct: 523 GSFDKCVHIWN-TQSG 537
Score = 122 (48.0 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 45/145 (31%), Positives = 65/145 (44%)
Query: 146 QAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPAL 205
Q H V ++ W P+ G+L LASC D T+K+W M + C L
Sbjct: 409 QGHTNEVNAIKWDPS---------GML-----LASCSDDMTLKIWSMKQEV----CIHDL 450
Query: 206 QMHSDWVRSVAWAPN---LGLPKSTI--ASASQDGTVVIWTCAKEGEQWEGRVLKDFKTP 260
Q H+ + ++ W+P P S I ASAS D TV +W + G L + P
Sbjct: 451 QAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIER-GVCTH--TLTKHQEP 507
Query: 261 VWSVSWSLTGNLLAVADANN-VTLW 284
V+SV++S G LA + V +W
Sbjct: 508 VYSVAFSPDGKYLASGSFDKCVHIW 532
Score = 97 (39.2 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 39/124 (31%), Positives = 54/124 (43%)
Query: 1 MPAQK--IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGL---SNSAS-----QHLAT 50
+P+ K + GHE V A + LA+ S DS+ +I L SN S +H
Sbjct: 220 IPSSKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIR 279
Query: 51 LKGHRGP----VWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVN 106
GH P V + W G++LA+ SYDG IW E D A T HK +
Sbjct: 280 EGGHDVPSNKDVTSLDWNTN--GTLLATGSYDGFARIWTE----DGNLASTLGQHKGPIF 333
Query: 107 SIAW 110
++ W
Sbjct: 334 ALKW 337
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 150 (57.9 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 46/152 (30%), Positives = 72/152 (47%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH + V VA GK LA+ S D++++ LS + H T +GHR V ++W+ P
Sbjct: 112 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTE-TPHF-TCQGHRHWVLSISWS-PD- 167
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLS---LACGSSD 125
G LAS +GQ+++W +A H + +++W P +A S D
Sbjct: 168 GKKLASGCKNGQILLWDPSTGKQVGRA--LAGHSKWITALSWEPLHANPECRYVASSSKD 225
Query: 126 GNISVFTATADGGWDTTRIDQAHPVGVTSVSW 157
G++ V+ TA G + RI H VT + W
Sbjct: 226 GSVRVWDTTA-GRCE--RILTGHTQSVTCLRW 254
Score = 124 (48.7 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 35/118 (29%), Positives = 56/118 (47%)
Query: 8 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPK 67
TGH+ ++ V + +A+AS D SIK+ ++LA+L+GH V+Q+AW+
Sbjct: 369 TGHQALINQVLFSPDSRIIASASFDKSIKL--WDGRTGKYLASLRGHVAAVYQIAWSADS 426
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD 125
+L S S D + +W Q A H V ++ W+P G +A G D
Sbjct: 427 --RLLVSGSSDSTLKVWDVKAQK---LAADLPGHADEVYAVDWSPD--GQRVASGGKD 477
Score = 117 (46.2 bits), Expect = 0.00041, P = 0.00041
Identities = 37/118 (31%), Positives = 57/118 (48%)
Query: 176 QKLASCGCDN-TVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKST-IASASQ 233
+KLAS GC N + +W G AL HS W+ +++W P P+ +AS+S+
Sbjct: 169 KKLAS-GCKNGQILLWDPSTG---KQVGRALAGHSKWITALSWEPLHANPECRYVASSSK 224
Query: 234 DGTVVIW-TCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANNVTLWKEAVDG 290
DG+V +W T A E R+L V + W G L + + + +W+ A DG
Sbjct: 225 DGSVRVWDTTAGRCE----RILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWR-AHDG 277
Score = 63 (27.2 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
L S D+T+KVW + D L H+D V +V W+P+ G +AS +D +
Sbjct: 429 LVSGSSDSTLKVWDVKAQKLAAD----LPGHADEVYAVDWSPD-G---QRVASGGKDKCL 480
Query: 238 VIW 240
IW
Sbjct: 481 RIW 483
Score = 40 (19.1 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 176 QKLASCGCDNTVKVWK 191
Q++AS G D +++W+
Sbjct: 469 QRVASGGKDKCLRIWR 484
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 167 (63.8 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 67/239 (28%), Positives = 106/239 (44%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH D+V D++ D GK LA+ S+D +IK+ + + T+ GH V VA P
Sbjct: 83 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF--ECIRTMHGHDHNVSSVA-IMPN- 138
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
G + S S D + +W+ Q + TF H+ V + P++ G +A S+D +
Sbjct: 139 GDHIVSASRDKTIKMWEV--QTGYC-VKTFTGHREWVRMVR--PNQDGTLIASCSNDQTV 193
Query: 129 SVFT-ATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGAL---VGLGLLD---PVQKLASC 181
V+ AT + + + H V +SWAP + ++ G P L S
Sbjct: 194 RVWVVATKECKAEL----REHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 249
Query: 182 GCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW 240
D T+K+W + G+ C L H +WVR V + G I S + D T+ +W
Sbjct: 250 SRDKTIKMWDVSTGM----CLMTLVGHDNWVRGVLFHSG-G---KFILSCADDKTLRVW 300
Score = 140 (54.3 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 62/240 (25%), Positives = 97/240 (40%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHP-K 67
GH+ V VA+ G + +AS D +IK+ + + T GHR W V P +
Sbjct: 125 GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC--VKTFTGHRE--W-VRMVRPNQ 179
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHEL--GLSLACGSS- 124
G+++ASCS D V +W + +A +H+ V I+WAP +S A GS
Sbjct: 180 DGTLIASCSNDQTVRVWVVATKE--CKAE-LREHEHVVECISWAPESSYSSISEATGSET 236
Query: 125 --DGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCG 182
G F + D + + + ++ G L G + + SC
Sbjct: 237 KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSG----GKFILSCA 292
Query: 183 CDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC 242
D T++VW N C L H +V S+ + P + + S D TV +W C
Sbjct: 293 DDKTLRVWDYKN----KRCMKTLNAHEHFVTSLDFHKTA--PY--VVTGSVDQTVKVWEC 344
Score = 108 (43.1 bits), Expect = 8.5e-10, Sum P(2) = 8.5e-10
Identities = 36/131 (27%), Positives = 60/131 (45%)
Query: 2 PAQKIE-TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQ 60
P +K +GH V V + +AS D++IK+ + TLKGH V
Sbjct: 33 PPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER--TLKGHTDSVQD 90
Query: 61 VAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLA 120
+++ H G +LASCS D + +W + + T + H +V+S+A P+ G +
Sbjct: 91 ISFDHS--GKLLASCSADMTIKLW---DFQGFECIRTMHGHDHNVSSVAIMPN--GDHIV 143
Query: 121 CGSSDGNISVF 131
S D I ++
Sbjct: 144 SASRDKTIKMW 154
Score = 101 (40.6 bits), Expect = 8.5e-10, Sum P(2) = 8.5e-10
Identities = 31/113 (27%), Positives = 51/113 (45%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
+ S D T+K+W++ G C H +WVR V PN + IAS S D TV
Sbjct: 142 IVSASRDKTIKMWEVQTGY----CVKTFTGHREWVRMVR--PNQD--GTLIASCSNDQTV 193
Query: 238 VIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANNVTLWKEAVDG 290
+W A + + E L++ + V +SW+ + ++++A K G
Sbjct: 194 RVWVVATKECKAE---LREHEHVVECISWAPESSYSSISEATGSETKKSGKPG 243
>UNIPROTKB|C3UJQ7 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1 Y-linked"
species:9593 "Gorilla gorilla" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0000122 GO:GO:0007605 InterPro:IPR013720
Pfam:PF08513 GO:GO:0042393 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 HOGENOM:HOG000220902 EMBL:FJ532265
ProteinModelPortal:C3UJQ7 Uniprot:C3UJQ7
Length = 524
Score = 137 (53.3 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 43/144 (29%), Positives = 69/144 (47%)
Query: 1 MPAQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQ 60
+P + + GH + V+ + D G LA+ S D ++KI + A H L+ H ++
Sbjct: 350 LPVKTFQ-GHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVH--DLQAHSKEIYT 406
Query: 61 VAWA-------HPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPH 113
+ W+ +P +LAS S+D V +W + Q T HT H+ V SIA++P
Sbjct: 407 IKWSPTGPATSNPNSSIMLASASFDSTVRLW-DVEQGVCT--HTLTKHQEPVYSIAFSPD 463
Query: 114 ELGLSLACGSSDGNISVFTATADG 137
G LA GS D + ++ T G
Sbjct: 464 --GKYLASGSFDKCVHIWN-TQSG 484
Score = 128 (50.1 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 47/146 (32%), Positives = 68/146 (46%)
Query: 146 QAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMD-CFPA 204
Q H V ++ W P+ G+L LASC D T+K+W M K D C
Sbjct: 356 QGHTNEVNAIKWDPS---------GML-----LASCSDDMTLKIWSM-----KQDACVHD 396
Query: 205 LQMHSDWVRSVAWAPN---LGLPKSTI--ASASQDGTVVIWTCAKEGEQWEGRVLKDFKT 259
LQ HS + ++ W+P P S+I ASAS D TV +W ++G L +
Sbjct: 397 LQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWD-VEQGVCTH--TLTKHQE 453
Query: 260 PVWSVSWSLTGNLLAVADANN-VTLW 284
PV+S+++S G LA + V +W
Sbjct: 454 PVYSIAFSPDGKYLASGSFDKCVHIW 479
Score = 87 (35.7 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 38/114 (33%), Positives = 49/114 (42%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGL---SNSASQHLATL----KG-HRGP--- 57
GHE V A + LA+ S DS+ +I L SN S L +G H P
Sbjct: 177 GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGWHDVPSNK 236
Query: 58 -VWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAW 110
V + W G++LA SYDG IW E N N A T HK + ++ W
Sbjct: 237 DVTSLDWNSD--GTLLAMGSYDGFARIWTE-NGN---LASTLGQHKGPIFALKW 284
>UNIPROTKB|B3RNR8 [details] [associations]
symbol:TRIADDRAFT_20668 "Probable cytosolic iron-sulfur
protein assembly protein" species:10228 "Trichoplax adhaerens"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS985242
RefSeq:XP_002109895.1 ProteinModelPortal:B3RNR8 STRING:B3RNR8
EnsemblMetazoa:TriadT20668 GeneID:6751110 KEGG:tad:TRIADDRAFT_20668
Uniprot:B3RNR8
Length = 313
Score = 165 (63.1 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 55/175 (31%), Positives = 79/175 (45%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH T+ VA G LA+ S D++I I + + +ATL+GH V V W+
Sbjct: 43 GHTRTIRSVAWSPCGNYLASCSFDATICIWSKKDGDFECMATLEGHENEVKCVNWSSS-- 100
Query: 69 GSILASCSYDGQVIIWKEGNQND-WTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGN 127
G LASCS D IW+ +++ + A DH V + W+P E L A S D
Sbjct: 101 GVYLASCSRDKSAWIWEFIEEDEEYECASVLTDHSQDVKHVVWSPKENALVSA--SYDNT 158
Query: 128 ISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGAL-VGLGLLDPVQKLASC 181
I ++ D W+ + H V S+S+ + G L V G D V K+ C
Sbjct: 159 IKIYKEV-DDDWECSHTLIGHESTVWSLSFHSS---GELFVSCGD-DKVLKIWKC 208
Score = 151 (58.2 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 40/118 (33%), Positives = 62/118 (52%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
LASC D T+ +W +G +C L+ H + V+ V W+ + G+ +AS S+D +
Sbjct: 60 LASCSFDATICIWSKKDG--DFECMATLEGHENEVKCVNWSSS-GV---YLASCSRDKSA 113
Query: 238 VIWTCAKEGEQWE-GRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQ 293
IW +E E++E VL D V V WS N L A +N + ++KE VD +W+
Sbjct: 114 WIWEFIEEDEEYECASVLTDHSQDVKHVVWSPKENALVSASYDNTIKIYKE-VDDDWE 170
Score = 147 (56.8 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 68/240 (28%), Positives = 105/240 (43%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQH--LATLKGHRGPVWQVAWAHP 66
GHE+ V V G LA+ S D S I ++ + L H V V W+ P
Sbjct: 87 GHENEVKCVNWSSSGVYLASCSRDKSAWIWEFIEEDEEYECASVLTDHSQDVKHVVWS-P 145
Query: 67 KFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELG-LSLACGSSD 125
K + L S SYD + I+KE + +DW +HT H+S+V S+++ H G L ++CG D
Sbjct: 146 KENA-LVSASYDNTIKIYKEVD-DDWECSHTLIGHESTVWSLSF--HSSGELFVSCGD-D 200
Query: 126 GNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLAS-CGCD 184
+ ++ G D I G + P V L+ K+A+ CG D
Sbjct: 201 KVLKIWKCLKSGPSDVKWISICTIAGYHN-------RPIYDVDWSKLN--NKIATACG-D 250
Query: 185 NTVKVWKMYN---GIWKMDCFPAL-QMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW 240
+ ++++ + I F A Q H+ V V W P + + +AS S D + IW
Sbjct: 251 DAIRIFSIVRITISISNQLLFIAYYQAHNHDVNVVRWHPKVD---NILASGSDDNCIKIW 307
Score = 143 (55.4 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 56/212 (26%), Positives = 93/212 (43%)
Query: 79 GQVI-IWKEGNQND-WTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATAD 136
GQ I IW + + +D WT + + A G LA S D I +++ D
Sbjct: 19 GQYIRIWAKNSDSDQWTCKSILTEGHTRTIRSV-AWSPCGNYLASCSFDATICIWSKK-D 76
Query: 137 GGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGI 196
G ++ + H V V+W+ + G+ LASC D + +W+
Sbjct: 77 GDFECMATLEGHENEVKCVNWSSS---------GVY-----LASCSRDKSAWIWEFIEED 122
Query: 197 WKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKE-GEQWE-GRVL 254
+ +C L HS V+ V W+P ++ + SAS D T+ I+ KE + WE L
Sbjct: 123 EEYECASVLTDHSQDVKHVVWSPK----ENALVSASYDNTIKIY---KEVDDDWECSHTL 175
Query: 255 KDFKTPVWSVSWSLTGNL-LAVADANNVTLWK 285
++ VWS+S+ +G L ++ D + +WK
Sbjct: 176 IGHESTVWSLSFHSSGELFVSCGDDKVLKIWK 207
Score = 124 (48.7 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 53/195 (27%), Positives = 78/195 (40%)
Query: 8 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPK 67
T H V V L +AS D++IKI + + TL GH VW +++ H
Sbjct: 132 TDHSQDVKHVVWSPKENALVSASYDNTIKIYKEVDDDWECSHTLIGHESTVWSLSF-HSS 190
Query: 68 FGSILASCSYDGQVIIWK--EGNQND--WTQAHTFND-HKSSVNSIAWAPHELGLSLACG 122
G + SC D + IWK + +D W T H + + W+ ++ ACG
Sbjct: 191 -GELFVSCGDDKVLKIWKCLKSGPSDVKWISICTIAGYHNRPIYDVDWSKLNNKIATACG 249
Query: 123 SSDGNI-SVFTATADGGWDTTRID--QAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLA 179
I S+ T I QAH V V W P + D + LA
Sbjct: 250 DDAIRIFSIVRITISISNQLLFIAYYQAHNHDVNVVRWHPKV-----------DNI--LA 296
Query: 180 SCGCDNTVKVWKMYN 194
S DN +K+WK+++
Sbjct: 297 SGSDDNCIKIWKVHS 311
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 167 (63.8 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 67/239 (28%), Positives = 106/239 (44%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH D+V D++ D GK LA+ S+D +IK+ + + T+ GH V VA P
Sbjct: 148 GHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGF--ECIRTMHGHDHNVSSVA-IMPN- 203
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
G + S S D + +W+ Q + TF H+ V + P++ G +A S+D +
Sbjct: 204 GDHIVSASRDKTIKMWEV--QTGYC-VKTFTGHREWVRMVR--PNQDGTLIASCSNDQTV 258
Query: 129 SVFT-ATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGAL---VGLGLLD---PVQKLASC 181
V+ AT + + + H V +SWAP + ++ G P L S
Sbjct: 259 RVWVVATKECKAEL----REHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 182 GCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW 240
D T+K+W + G+ C L H +WVR V + G I S + D T+ +W
Sbjct: 315 SRDKTIKMWDVSTGM----CLMTLVGHDNWVRGVLFHSG-G---KFILSCADDKTLRVW 365
Score = 140 (54.3 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 62/240 (25%), Positives = 97/240 (40%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHP-K 67
GH+ V VA+ G + +AS D +IK+ + + T GHR W V P +
Sbjct: 190 GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC--VKTFTGHRE--W-VRMVRPNQ 244
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHEL--GLSLACGSS- 124
G+++ASCS D V +W + +A +H+ V I+WAP +S A GS
Sbjct: 245 DGTLIASCSNDQTVRVWVVATKE--CKAE-LREHEHVVECISWAPESSYSSISEATGSET 301
Query: 125 --DGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCG 182
G F + D + + + ++ G L G + + SC
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSG----GKFILSCA 357
Query: 183 CDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC 242
D T++VW N C L H +V S+ + P + + S D TV +W C
Sbjct: 358 DDKTLRVWDYKN----KRCMKTLNAHEHFVTSLDFHKTA--PY--VVTGSVDQTVKVWEC 409
Score = 107 (42.7 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 36/131 (27%), Positives = 60/131 (45%)
Query: 2 PAQKIE-TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQ 60
P +K +GH V V + +AS D++IK+ + TLKGH V
Sbjct: 98 PPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER--TLKGHTDSVED 155
Query: 61 VAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLA 120
+++ H G +LASCS D + +W + + T + H +V+S+A P+ G +
Sbjct: 156 ISFDHS--GKLLASCSADMTIKLW---DFQGFECIRTMHGHDHNVSSVAIMPN--GDHIV 208
Query: 121 CGSSDGNISVF 131
S D I ++
Sbjct: 209 SASRDKTIKMW 219
Score = 103 (41.3 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 35/109 (32%), Positives = 53/109 (48%)
Query: 51 LKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAW 110
L GHR PV +V + HP F S++ S S D + +W + D+ + T H SV I++
Sbjct: 104 LSGHRSPVTRVIF-HPVF-SVMVSASEDATIKVW-DYETGDFER--TLKGHTDSVEDISF 158
Query: 111 APHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAP 159
H G LA S+D I ++ G++ R H V+SV+ P
Sbjct: 159 -DHS-GKLLASCSADMTIKLWDFQ---GFECIRTMHGHDHNVSSVAIMP 202
Score = 101 (40.6 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 31/113 (27%), Positives = 51/113 (45%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
+ S D T+K+W++ G C H +WVR V PN + IAS S D TV
Sbjct: 207 IVSASRDKTIKMWEVQTGY----CVKTFTGHREWVRMVR--PNQD--GTLIASCSNDQTV 258
Query: 238 VIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANNVTLWKEAVDG 290
+W A + + E L++ + V +SW+ + ++++A K G
Sbjct: 259 RVWVVATKECKAE---LREHEHVVECISWAPESSYSSISEATGSETKKSGKPG 308
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 167 (63.8 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 67/239 (28%), Positives = 106/239 (44%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH D+V D++ D GK LA+ S+D +IK+ + + T+ GH V VA P
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF--ECIRTMHGHDHNVSSVA-IMPN- 203
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
G + S S D + +W+ Q + TF H+ V + P++ G +A S+D +
Sbjct: 204 GDHIVSASRDKTIKMWEV--QTGYC-VKTFTGHREWVRMVR--PNQDGTLIASCSNDQTV 258
Query: 129 SVFT-ATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGAL---VGLGLLD---PVQKLASC 181
V+ AT + + + H V +SWAP + ++ G P L S
Sbjct: 259 RVWVVATKECKAEL----REHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 182 GCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW 240
D T+K+W + G+ C L H +WVR V + G I S + D T+ +W
Sbjct: 315 SRDKTIKMWDVSTGM----CLMTLVGHDNWVRGVLFHSG-G---KFILSCADDKTLRVW 365
Score = 140 (54.3 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 62/240 (25%), Positives = 97/240 (40%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHP-K 67
GH+ V VA+ G + +AS D +IK+ + + T GHR W V P +
Sbjct: 190 GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC--VKTFTGHRE--W-VRMVRPNQ 244
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHEL--GLSLACGSS- 124
G+++ASCS D V +W + +A +H+ V I+WAP +S A GS
Sbjct: 245 DGTLIASCSNDQTVRVWVVATKE--CKAE-LREHEHVVECISWAPESSYSSISEATGSET 301
Query: 125 --DGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCG 182
G F + D + + + ++ G L G + + SC
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSG----GKFILSCA 357
Query: 183 CDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC 242
D T++VW N C L H +V S+ + P + + S D TV +W C
Sbjct: 358 DDKTLRVWDYKN----KRCMKTLNAHEHFVTSLDFHKTA--PY--VVTGSVDQTVKVWEC 409
Score = 108 (43.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 36/131 (27%), Positives = 60/131 (45%)
Query: 2 PAQKIE-TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQ 60
P +K +GH V V + +AS D++IK+ + TLKGH V
Sbjct: 98 PPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER--TLKGHTDSVQD 155
Query: 61 VAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLA 120
+++ H G +LASCS D + +W + + T + H +V+S+A P+ G +
Sbjct: 156 ISFDHS--GKLLASCSADMTIKLW---DFQGFECIRTMHGHDHNVSSVAIMPN--GDHIV 208
Query: 121 CGSSDGNISVF 131
S D I ++
Sbjct: 209 SASRDKTIKMW 219
Score = 101 (40.6 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 31/113 (27%), Positives = 51/113 (45%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
+ S D T+K+W++ G C H +WVR V PN + IAS S D TV
Sbjct: 207 IVSASRDKTIKMWEVQTGY----CVKTFTGHREWVRMVR--PNQD--GTLIASCSNDQTV 258
Query: 238 VIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANNVTLWKEAVDG 290
+W A + + E L++ + V +SW+ + ++++A K G
Sbjct: 259 RVWVVATKECKAE---LREHEHVVECISWAPESSYSSISEATGSETKKSGKPG 308
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 167 (63.8 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 67/239 (28%), Positives = 106/239 (44%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH D+V D++ D GK LA+ S+D +IK+ + + T+ GH V VA P
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF--ECIRTMHGHDHNVSSVA-IMPN- 203
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
G + S S D + +W+ Q + TF H+ V + P++ G +A S+D +
Sbjct: 204 GDHIVSASRDKTIKMWEV--QTGYC-VKTFTGHREWVRMVR--PNQDGTLIASCSNDQTV 258
Query: 129 SVFT-ATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGAL---VGLGLLD---PVQKLASC 181
V+ AT + + + H V +SWAP + ++ G P L S
Sbjct: 259 RVWVVATKECKAEL----REHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 182 GCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW 240
D T+K+W + G+ C L H +WVR V + G I S + D T+ +W
Sbjct: 315 SRDKTIKMWDVSTGM----CLMTLVGHDNWVRGVLFHSG-G---KFILSCADDKTLRVW 365
Score = 140 (54.3 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 62/240 (25%), Positives = 97/240 (40%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHP-K 67
GH+ V VA+ G + +AS D +IK+ + + T GHR W V P +
Sbjct: 190 GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC--VKTFTGHRE--W-VRMVRPNQ 244
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHEL--GLSLACGSS- 124
G+++ASCS D V +W + +A +H+ V I+WAP +S A GS
Sbjct: 245 DGTLIASCSNDQTVRVWVVATKE--CKAE-LREHEHVVECISWAPESSYSSISEATGSET 301
Query: 125 --DGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCG 182
G F + D + + + ++ G L G + + SC
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSG----GKFILSCA 357
Query: 183 CDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC 242
D T++VW N C L H +V S+ + P + + S D TV +W C
Sbjct: 358 DDKTLRVWDYKN----KRCMKTLNAHEHFVTSLDFHKTA--PY--VVTGSVDQTVKVWEC 409
Score = 108 (43.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 36/131 (27%), Positives = 60/131 (45%)
Query: 2 PAQKIE-TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQ 60
P +K +GH V V + +AS D++IK+ + TLKGH V
Sbjct: 98 PPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER--TLKGHTDSVQD 155
Query: 61 VAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLA 120
+++ H G +LASCS D + +W + + T + H +V+S+A P+ G +
Sbjct: 156 ISFDHS--GKLLASCSADMTIKLW---DFQGFECIRTMHGHDHNVSSVAIMPN--GDHIV 208
Query: 121 CGSSDGNISVF 131
S D I ++
Sbjct: 209 SASRDKTIKMW 219
Score = 101 (40.6 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 31/113 (27%), Positives = 51/113 (45%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
+ S D T+K+W++ G C H +WVR V PN + IAS S D TV
Sbjct: 207 IVSASRDKTIKMWEVQTGY----CVKTFTGHREWVRMVR--PNQD--GTLIASCSNDQTV 258
Query: 238 VIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANNVTLWKEAVDG 290
+W A + + E L++ + V +SW+ + ++++A K G
Sbjct: 259 RVWVVATKECKAE---LREHEHVVECISWAPESSYSSISEATGSETKKSGKPG 308
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 167 (63.8 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 67/239 (28%), Positives = 106/239 (44%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH D+V D++ D GK LA+ S+D +IK+ + + T+ GH V VA P
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF--ECIRTMHGHDHNVSSVA-IMPN- 203
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
G + S S D + +W+ Q + TF H+ V + P++ G +A S+D +
Sbjct: 204 GDHIVSASRDKTIKMWEV--QTGYC-VKTFTGHREWVRMVR--PNQDGTLIASCSNDQTV 258
Query: 129 SVFT-ATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGAL---VGLGLLD---PVQKLASC 181
V+ AT + + + H V +SWAP + ++ G P L S
Sbjct: 259 RVWVVATKECKAEL----REHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 182 GCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW 240
D T+K+W + G+ C L H +WVR V + G I S + D T+ +W
Sbjct: 315 SRDKTIKMWDVSTGM----CLMTLVGHDNWVRGVLFHSG-G---KFILSCADDKTLRVW 365
Score = 140 (54.3 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 62/240 (25%), Positives = 97/240 (40%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHP-K 67
GH+ V VA+ G + +AS D +IK+ + + T GHR W V P +
Sbjct: 190 GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC--VKTFTGHRE--W-VRMVRPNQ 244
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHEL--GLSLACGSS- 124
G+++ASCS D V +W + +A +H+ V I+WAP +S A GS
Sbjct: 245 DGTLIASCSNDQTVRVWVVATKE--CKAE-LREHEHVVECISWAPESSYSSISEATGSET 301
Query: 125 --DGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCG 182
G F + D + + + ++ G L G + + SC
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSG----GKFILSCA 357
Query: 183 CDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC 242
D T++VW N C L H +V S+ + P + + S D TV +W C
Sbjct: 358 DDKTLRVWDYKN----KRCMKTLNAHEHFVTSLDFHKTA--PY--VVTGSVDQTVKVWEC 409
Score = 108 (43.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 36/131 (27%), Positives = 60/131 (45%)
Query: 2 PAQKIE-TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQ 60
P +K +GH V V + +AS D++IK+ + TLKGH V
Sbjct: 98 PPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER--TLKGHTDSVQD 155
Query: 61 VAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLA 120
+++ H G +LASCS D + +W + + T + H +V+S+A P+ G +
Sbjct: 156 ISFDHS--GKLLASCSADMTIKLW---DFQGFECIRTMHGHDHNVSSVAIMPN--GDHIV 208
Query: 121 CGSSDGNISVF 131
S D I ++
Sbjct: 209 SASRDKTIKMW 219
Score = 101 (40.6 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 31/113 (27%), Positives = 51/113 (45%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
+ S D T+K+W++ G C H +WVR V PN + IAS S D TV
Sbjct: 207 IVSASRDKTIKMWEVQTGY----CVKTFTGHREWVRMVR--PNQD--GTLIASCSNDQTV 258
Query: 238 VIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANNVTLWKEAVDG 290
+W A + + E L++ + V +SW+ + ++++A K G
Sbjct: 259 RVWVVATKECKAE---LREHEHVVECISWAPESSYSSISEATGSETKKSGKPG 308
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 167 (63.8 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 67/239 (28%), Positives = 106/239 (44%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH D+V D++ D GK LA+ S+D +IK+ + + T+ GH V VA P
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF--ECIRTMHGHDHNVSSVA-IMPN- 203
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
G + S S D + +W+ Q + TF H+ V + P++ G +A S+D +
Sbjct: 204 GDHIVSASRDKTIKMWEV--QTGYC-VKTFTGHREWVRMVR--PNQDGTLIASCSNDQTV 258
Query: 129 SVFT-ATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGAL---VGLGLLD---PVQKLASC 181
V+ AT + + + H V +SWAP + ++ G P L S
Sbjct: 259 RVWVVATKECKAEL----REHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 182 GCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW 240
D T+K+W + G+ C L H +WVR V + G I S + D T+ +W
Sbjct: 315 SRDKTIKMWDVSTGM----CLMTLVGHDNWVRGVLFHSG-G---KFILSCADDKTLRVW 365
Score = 140 (54.3 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 62/240 (25%), Positives = 97/240 (40%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHP-K 67
GH+ V VA+ G + +AS D +IK+ + + T GHR W V P +
Sbjct: 190 GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC--VKTFTGHRE--W-VRMVRPNQ 244
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHEL--GLSLACGSS- 124
G+++ASCS D V +W + +A +H+ V I+WAP +S A GS
Sbjct: 245 DGTLIASCSNDQTVRVWVVATKE--CKAE-LREHEHVVECISWAPESSYSSISEATGSET 301
Query: 125 --DGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCG 182
G F + D + + + ++ G L G + + SC
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSG----GKFILSCA 357
Query: 183 CDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC 242
D T++VW N C L H +V S+ + P + + S D TV +W C
Sbjct: 358 DDKTLRVWDYKN----KRCMKTLNAHEHFVTSLDFHKTA--PY--VVTGSVDQTVKVWEC 409
Score = 108 (43.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 36/131 (27%), Positives = 60/131 (45%)
Query: 2 PAQKIE-TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQ 60
P +K +GH V V + +AS D++IK+ + TLKGH V
Sbjct: 98 PPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER--TLKGHTDSVQD 155
Query: 61 VAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLA 120
+++ H G +LASCS D + +W + + T + H +V+S+A P+ G +
Sbjct: 156 ISFDHS--GKLLASCSADMTIKLW---DFQGFECIRTMHGHDHNVSSVAIMPN--GDHIV 208
Query: 121 CGSSDGNISVF 131
S D I ++
Sbjct: 209 SASRDKTIKMW 219
Score = 101 (40.6 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 31/113 (27%), Positives = 51/113 (45%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
+ S D T+K+W++ G C H +WVR V PN + IAS S D TV
Sbjct: 207 IVSASRDKTIKMWEVQTGY----CVKTFTGHREWVRMVR--PNQD--GTLIASCSNDQTV 258
Query: 238 VIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANNVTLWKEAVDG 290
+W A + + E L++ + V +SW+ + ++++A K G
Sbjct: 259 RVWVVATKECKAE---LREHEHVVECISWAPESSYSSISEATGSETKKSGKPG 308
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 167 (63.8 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 67/239 (28%), Positives = 106/239 (44%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH D+V D++ D GK LA+ S+D +IK+ + + T+ GH V VA P
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF--ECIRTMHGHDHNVSSVA-IMPN- 203
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
G + S S D + +W+ Q + TF H+ V + P++ G +A S+D +
Sbjct: 204 GDHIVSASRDKTIKMWEV--QTGYC-VKTFTGHREWVRMVR--PNQDGTLIASCSNDQTV 258
Query: 129 SVFT-ATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGAL---VGLGLLD---PVQKLASC 181
V+ AT + + + H V +SWAP + ++ G P L S
Sbjct: 259 RVWVVATKECKAEL----REHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 182 GCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW 240
D T+K+W + G+ C L H +WVR V + G I S + D T+ +W
Sbjct: 315 SRDKTIKMWDVSTGM----CLMTLVGHDNWVRGVLFHSG-G---KFILSCADDKTLRVW 365
Score = 140 (54.3 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 62/240 (25%), Positives = 97/240 (40%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHP-K 67
GH+ V VA+ G + +AS D +IK+ + + T GHR W V P +
Sbjct: 190 GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC--VKTFTGHRE--W-VRMVRPNQ 244
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHEL--GLSLACGSS- 124
G+++ASCS D V +W + +A +H+ V I+WAP +S A GS
Sbjct: 245 DGTLIASCSNDQTVRVWVVATKE--CKAE-LREHEHVVECISWAPESSYSSISEATGSET 301
Query: 125 --DGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCG 182
G F + D + + + ++ G L G + + SC
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSG----GKFILSCA 357
Query: 183 CDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC 242
D T++VW N C L H +V S+ + P + + S D TV +W C
Sbjct: 358 DDKTLRVWDYKN----KRCMKTLNAHEHFVTSLDFHKTA--PY--VVTGSVDQTVKVWEC 409
Score = 108 (43.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 36/131 (27%), Positives = 60/131 (45%)
Query: 2 PAQKIE-TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQ 60
P +K +GH V V + +AS D++IK+ + TLKGH V
Sbjct: 98 PPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER--TLKGHTDSVQD 155
Query: 61 VAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLA 120
+++ H G +LASCS D + +W + + T + H +V+S+A P+ G +
Sbjct: 156 ISFDHS--GKLLASCSADMTIKLW---DFQGFECIRTMHGHDHNVSSVAIMPN--GDHIV 208
Query: 121 CGSSDGNISVF 131
S D I ++
Sbjct: 209 SASRDKTIKMW 219
Score = 101 (40.6 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 31/113 (27%), Positives = 51/113 (45%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
+ S D T+K+W++ G C H +WVR V PN + IAS S D TV
Sbjct: 207 IVSASRDKTIKMWEVQTGY----CVKTFTGHREWVRMVR--PNQD--GTLIASCSNDQTV 258
Query: 238 VIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANNVTLWKEAVDG 290
+W A + + E L++ + V +SW+ + ++++A K G
Sbjct: 259 RVWVVATKECKAE---LREHEHVVECISWAPESSYSSISEATGSETKKSGKPG 308
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 167 (63.8 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 67/239 (28%), Positives = 106/239 (44%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH D+V D++ D GK LA+ S+D +IK+ + + T+ GH V VA P
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF--ECIRTMHGHDHNVSSVA-IMPN- 203
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
G + S S D + +W+ Q + TF H+ V + P++ G +A S+D +
Sbjct: 204 GDHIVSASRDKTIKMWEV--QTGYC-VKTFTGHREWVRMVR--PNQDGTLIASCSNDQTV 258
Query: 129 SVFT-ATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGAL---VGLGLLD---PVQKLASC 181
V+ AT + + + H V +SWAP + ++ G P L S
Sbjct: 259 RVWVVATKECKAEL----REHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 182 GCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW 240
D T+K+W + G+ C L H +WVR V + G I S + D T+ +W
Sbjct: 315 SRDKTIKMWDVSTGM----CLMTLVGHDNWVRGVLFHSG-G---KFILSCADDKTLRVW 365
Score = 140 (54.3 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 62/240 (25%), Positives = 97/240 (40%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHP-K 67
GH+ V VA+ G + +AS D +IK+ + + T GHR W V P +
Sbjct: 190 GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC--VKTFTGHRE--W-VRMVRPNQ 244
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHEL--GLSLACGSS- 124
G+++ASCS D V +W + +A +H+ V I+WAP +S A GS
Sbjct: 245 DGTLIASCSNDQTVRVWVVATKE--CKAE-LREHEHVVECISWAPESSYSSISEATGSET 301
Query: 125 --DGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCG 182
G F + D + + + ++ G L G + + SC
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSG----GKFILSCA 357
Query: 183 CDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC 242
D T++VW N C L H +V S+ + P + + S D TV +W C
Sbjct: 358 DDKTLRVWDYKN----KRCMKTLNAHEHFVTSLDFHKTA--PY--VVTGSVDQTVKVWEC 409
Score = 108 (43.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 36/131 (27%), Positives = 60/131 (45%)
Query: 2 PAQKIE-TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQ 60
P +K +GH V V + +AS D++IK+ + TLKGH V
Sbjct: 98 PPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER--TLKGHTDSVQD 155
Query: 61 VAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLA 120
+++ H G +LASCS D + +W + + T + H +V+S+A P+ G +
Sbjct: 156 ISFDHS--GKLLASCSADMTIKLW---DFQGFECIRTMHGHDHNVSSVAIMPN--GDHIV 208
Query: 121 CGSSDGNISVF 131
S D I ++
Sbjct: 209 SASRDKTIKMW 219
Score = 101 (40.6 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 31/113 (27%), Positives = 51/113 (45%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
+ S D T+K+W++ G C H +WVR V PN + IAS S D TV
Sbjct: 207 IVSASRDKTIKMWEVQTGY----CVKTFTGHREWVRMVR--PNQD--GTLIASCSNDQTV 258
Query: 238 VIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANNVTLWKEAVDG 290
+W A + + E L++ + V +SW+ + ++++A K G
Sbjct: 259 RVWVVATKECKAE---LREHEHVVECISWAPESSYSSISEATGSETKKSGKPG 308
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 167 (63.8 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 67/239 (28%), Positives = 106/239 (44%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH D+V D++ D GK LA+ S+D +IK+ + + T+ GH V VA P
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF--ECIRTMHGHDHNVSSVA-IMPN- 203
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
G + S S D + +W+ Q + TF H+ V + P++ G +A S+D +
Sbjct: 204 GDHIVSASRDKTIKMWEV--QTGYC-VKTFTGHREWVRMVR--PNQDGTLIASCSNDQTV 258
Query: 129 SVFT-ATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGAL---VGLGLLD---PVQKLASC 181
V+ AT + + + H V +SWAP + ++ G P L S
Sbjct: 259 RVWVVATKECKAEL----REHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 182 GCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW 240
D T+K+W + G+ C L H +WVR V + G I S + D T+ +W
Sbjct: 315 SRDKTIKMWDVSTGM----CLMTLVGHDNWVRGVLFHSG-G---KFILSCADDKTLRVW 365
Score = 140 (54.3 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 62/240 (25%), Positives = 97/240 (40%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHP-K 67
GH+ V VA+ G + +AS D +IK+ + + T GHR W V P +
Sbjct: 190 GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC--VKTFTGHRE--W-VRMVRPNQ 244
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHEL--GLSLACGSS- 124
G+++ASCS D V +W + +A +H+ V I+WAP +S A GS
Sbjct: 245 DGTLIASCSNDQTVRVWVVATKE--CKAE-LREHEHVVECISWAPESSYSSISEATGSET 301
Query: 125 --DGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCG 182
G F + D + + + ++ G L G + + SC
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSG----GKFILSCA 357
Query: 183 CDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC 242
D T++VW N C L H +V S+ + P + + S D TV +W C
Sbjct: 358 DDKTLRVWDYKN----KRCMKTLNAHEHFVTSLDFHKTA--PY--VVTGSVDQTVKVWEC 409
Score = 108 (43.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 36/131 (27%), Positives = 60/131 (45%)
Query: 2 PAQKIE-TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQ 60
P +K +GH V V + +AS D++IK+ + TLKGH V
Sbjct: 98 PPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER--TLKGHTDSVQD 155
Query: 61 VAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLA 120
+++ H G +LASCS D + +W + + T + H +V+S+A P+ G +
Sbjct: 156 ISFDHS--GKLLASCSADMTIKLW---DFQGFECIRTMHGHDHNVSSVAIMPN--GDHIV 208
Query: 121 CGSSDGNISVF 131
S D I ++
Sbjct: 209 SASRDKTIKMW 219
Score = 101 (40.6 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 31/113 (27%), Positives = 51/113 (45%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
+ S D T+K+W++ G C H +WVR V PN + IAS S D TV
Sbjct: 207 IVSASRDKTIKMWEVQTGY----CVKTFTGHREWVRMVR--PNQD--GTLIASCSNDQTV 258
Query: 238 VIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANNVTLWKEAVDG 290
+W A + + E L++ + V +SW+ + ++++A K G
Sbjct: 259 RVWVVATKECKAE---LREHEHVVECISWAPESSYSSISEATGSETKKSGKPG 308
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 167 (63.8 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 67/239 (28%), Positives = 106/239 (44%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH D+V D++ D GK LA+ S+D +IK+ + + T+ GH V VA P
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF--ECIRTMHGHDHNVSSVA-IMPN- 203
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
G + S S D + +W+ Q + TF H+ V + P++ G +A S+D +
Sbjct: 204 GDHIVSASRDKTIKMWEV--QTGYC-VKTFTGHREWVRMVR--PNQDGTLIASCSNDQTV 258
Query: 129 SVFT-ATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGAL---VGLGLLD---PVQKLASC 181
V+ AT + + + H V +SWAP + ++ G P L S
Sbjct: 259 RVWVVATKECKAEL----REHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 182 GCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW 240
D T+K+W + G+ C L H +WVR V + G I S + D T+ +W
Sbjct: 315 SRDKTIKMWDVSTGM----CLMTLVGHDNWVRGVLFHSG-G---KFILSCADDKTLRVW 365
Score = 140 (54.3 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 62/240 (25%), Positives = 97/240 (40%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHP-K 67
GH+ V VA+ G + +AS D +IK+ + + T GHR W V P +
Sbjct: 190 GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC--VKTFTGHRE--W-VRMVRPNQ 244
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHEL--GLSLACGSS- 124
G+++ASCS D V +W + +A +H+ V I+WAP +S A GS
Sbjct: 245 DGTLIASCSNDQTVRVWVVATKE--CKAE-LREHEHVVECISWAPESSYSSISEATGSET 301
Query: 125 --DGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCG 182
G F + D + + + ++ G L G + + SC
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSG----GKFILSCA 357
Query: 183 CDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC 242
D T++VW N C L H +V S+ + P + + S D TV +W C
Sbjct: 358 DDKTLRVWDYKN----KRCMKTLNAHEHFVTSLDFHKTA--PY--VVTGSVDQTVKVWEC 409
Score = 108 (43.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 36/131 (27%), Positives = 60/131 (45%)
Query: 2 PAQKIE-TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQ 60
P +K +GH V V + +AS D++IK+ + TLKGH V
Sbjct: 98 PPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER--TLKGHTDSVQD 155
Query: 61 VAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLA 120
+++ H G +LASCS D + +W + + T + H +V+S+A P+ G +
Sbjct: 156 ISFDHS--GKLLASCSADMTIKLW---DFQGFECIRTMHGHDHNVSSVAIMPN--GDHIV 208
Query: 121 CGSSDGNISVF 131
S D I ++
Sbjct: 209 SASRDKTIKMW 219
Score = 101 (40.6 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 31/113 (27%), Positives = 51/113 (45%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
+ S D T+K+W++ G C H +WVR V PN + IAS S D TV
Sbjct: 207 IVSASRDKTIKMWEVQTGY----CVKTFTGHREWVRMVR--PNQD--GTLIASCSNDQTV 258
Query: 238 VIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANNVTLWKEAVDG 290
+W A + + E L++ + V +SW+ + ++++A K G
Sbjct: 259 RVWVVATKECKAE---LREHEHVVECISWAPESSYSSISEATGSETKKSGKPG 308
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 135 (52.6 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 43/138 (31%), Positives = 68/138 (49%)
Query: 2 PAQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQV 61
PA K TGH+ V+ V D G LA+ S DS+ KI + S H L+ H ++ +
Sbjct: 440 PA-KTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVH--DLREHTKEIYTI 496
Query: 62 AWA-------HPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHE 114
W+ +P LAS S+D V +W + +FN H+ V S+A++P+
Sbjct: 497 RWSPTGPGTNNPNKQLTLASASFDSTVKLW---DAELGKMLCSFNGHREPVYSLAFSPN- 552
Query: 115 LGLSLACGSSDGNISVFT 132
G +A GS D +I +++
Sbjct: 553 -GEYIASGSLDKSIHIWS 569
Score = 112 (44.5 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 36/122 (29%), Positives = 61/122 (50%)
Query: 173 DPVQKL-ASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPN---LGLPKS-- 226
DP L ASC D+T K+W + + D L+ H+ + ++ W+P P
Sbjct: 457 DPTGSLLASCSDDSTAKIWNIKQSTFVHD----LREHTKEIYTIRWSPTGPGTNNPNKQL 512
Query: 227 TIASASQDGTVVIWTCAKEGEQWEGRVLKDF---KTPVWSVSWSLTGNLLAVADAN-NVT 282
T+ASAS D TV +W + E G++L F + PV+S+++S G +A + ++
Sbjct: 513 TLASASFDSTVKLW----DAEL--GKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIH 566
Query: 283 LW 284
+W
Sbjct: 567 IW 568
Score = 110 (43.8 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 39/117 (33%), Positives = 61/117 (52%)
Query: 168 GLGLLDPVQKL--ASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPK 225
G G +P ++L AS D+TVK+W G KM C + H + V S+A++PN G
Sbjct: 502 GPGTNNPNKQLTLASASFDSTVKLWDAELG--KMLC--SFNGHREPVYSLAFSPN-G--- 553
Query: 226 STIASASQDGTVVIWTCAKEGEQWEGRVLKDF--KTPVWSVSWSLTGNLLAVADANN 280
IAS S D ++ IW+ EG+++K + ++ V W+ GN +A A+N
Sbjct: 554 EYIASGSLDKSIHIWSIK------EGKIVKTYTGNGGIFEVCWNKEGNKIAACFADN 604
Score = 105 (42.0 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 36/137 (26%), Positives = 55/137 (40%)
Query: 23 GKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVI 82
G LAT S D +I L+ ++TL H+GP++ + W K G L + S D +
Sbjct: 336 GTLLATGSCDGQARIWTLNGEL---ISTLSKHKGPIFSLKWN--KKGDYLLTGSVDRTAV 390
Query: 83 IWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTT 142
+W + +W Q F H + W + +S A S+D I + G
Sbjct: 391 VW-DVKAEEWKQQFEF--HSGPTLDVDWRNN---VSFATSSTDSMIYLCKI---GETRPA 441
Query: 143 RIDQAHPVGVTSVSWAP 159
+ H V V W P
Sbjct: 442 KTFTGHQGEVNCVKWDP 458
Score = 82 (33.9 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 29/102 (28%), Positives = 43/102 (42%)
Query: 184 DNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCA 243
D T VW + WK + HS V W N+ + A++S D +I+ C
Sbjct: 386 DRTAVVWDVKAEEWKQQ----FEFHSGPTLDVDWRNNV-----SFATSSTDS--MIYLC- 433
Query: 244 KEGEQWEGRVLKDFKTPVWSVSWSLTGNLLA-VADANNVTLW 284
K GE + + V V W TG+LLA +D + +W
Sbjct: 434 KIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIW 475
Score = 78 (32.5 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 42/155 (27%), Positives = 60/155 (38%)
Query: 7 ETGHE----DTVHDVAMDFYGKRLATASSDSS--IKIIGLSNSASQHLAT-----LKGHR 55
E HE D ++ +D K +A S + + I+ S + H+ L+GH
Sbjct: 206 EKSHEKQLGDADREMVIDQTDKEIAGDGSTGAEPMDIVMTPTSQTSHIPNSDVRILEGHT 265
Query: 56 GPVWQVAWAHPKFGSILASCSYDGQVIIWK--EG---------NQNDWTQAHT---FNDH 101
V AW+ P S+LAS S D IW EG N N H N+
Sbjct: 266 SEVCACAWS-PS-ASLLASGSGDATARIWSIPEGSFKAVHTGRNINALILKHAKGKSNEK 323
Query: 102 KSSVNSIAWAPHELGLSLACGSSDGNISVFTATAD 136
V ++ W G LA GS DG ++T +
Sbjct: 324 SKDVTTLDWNGE--GTLLATGSCDGQARIWTLNGE 356
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 166 (63.5 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 63/212 (29%), Positives = 90/212 (42%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH D V+D+A+D GK+L + SSD SIK+ + L +LKGH V V + P
Sbjct: 146 GHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQTYDC-LKSLKGHEHTVSSVTFL-PT- 202
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
G + S S D + W + + +TF H V I + G A S D +
Sbjct: 203 GDFVLSASRDHTIKQW---DISTGYCVYTFRGHNDWVRMIRISND--GTLFASASLDQTV 257
Query: 129 SVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLL-DPVQKLASCGCDNTV 187
+V++ R D H V V WAP A + G + L S D ++
Sbjct: 258 TVWSFATKSAKLVLR-DHEH--AVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSI 314
Query: 188 KVWKMYNGIWKMDCFPALQMHSDWVRSVAWAP 219
K W + G D L H +WVR +A+ P
Sbjct: 315 KAWNINTG----DVLFTLLAHENWVRGLAFHP 342
Score = 136 (52.9 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 55/236 (23%), Positives = 97/236 (41%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GHE TV V G + +AS D +IK +S + T +GH V + ++
Sbjct: 189 GHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVY--TFRGHNDWVRMIRISND-- 244
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
G++ AS S D V +W ++ DH+ +V + WAP ++ +GN
Sbjct: 245 GTLFASASLDQTVTVWSFATKS---AKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNS 301
Query: 129 S--VFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNT 186
+ +F+ + D R +A + V + + GL + L S D T
Sbjct: 302 THILFSGSRD------RSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKT 355
Query: 187 VKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC 242
++VW++ C A++ H +V +VA+ + + S D + +W C
Sbjct: 356 LRVWELS----AQRCMKAIEAHEHFVSTVAFHQT----SPFVITGSVDMSCKVWEC 403
Score = 99 (39.9 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 29/88 (32%), Positives = 44/88 (50%)
Query: 180 SCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVI 239
S D+T+K W + G C + H+DWVR + + N G + ASAS D TV +
Sbjct: 208 SASRDHTIKQWDISTGY----CVYTFRGHNDWVRMIRIS-NDG---TLFASASLDQTVTV 259
Query: 240 WTCAKEGEQWEGRVLKDFKTPVWSVSWS 267
W+ A + + VL+D + V V W+
Sbjct: 260 WSFATKSAKL---VLRDHEHAVECVEWA 284
Score = 97 (39.2 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 37/112 (33%), Positives = 56/112 (50%)
Query: 51 LKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWK-EGNQNDWTQAHTFNDHKSSVNSIA 109
L GHR P+ +V + HP + +I+ASCS D + +W E Q + T H +VN IA
Sbjct: 102 LTGHRLPITRVIF-HPLW-TIMASCSEDATIKVWDYETGQLE----RTLKGHTDAVNDIA 155
Query: 110 WAPHELGLSLACGSSDGNISVFTATADGG--WDTTRIDQAHPVGVTSVSWAP 159
G L SSD +I ++ D G +D + + H V+SV++ P
Sbjct: 156 I--DAAGKQLVSCSSDLSIKLW----DFGQTYDCLKSLKGHEHTVSSVTFLP 201
Score = 92 (37.4 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 31/109 (28%), Positives = 49/109 (44%)
Query: 4 QKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAW 63
QK+ TGH + V +A+ S D++IK+ + TLKGH V +A
Sbjct: 100 QKL-TGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLER--TLKGHTDAVNDIAI 156
Query: 64 AHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAP 112
G L SCS D + +W G D ++ H+ +V+S+ + P
Sbjct: 157 --DAAGKQLVSCSSDLSIKLWDFGQTYDCLKS--LKGHEHTVSSVTFLP 201
Score = 63 (27.2 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 28/116 (24%), Positives = 48/116 (41%)
Query: 179 ASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVV 238
AS D TV VW K+ L+ H V V WAP+ T + T +
Sbjct: 249 ASASLDQTVTVWSFATKSAKL----VLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHI 304
Query: 239 IWTCAKEG--EQWE---GRVLKDFKTPV-W--SVSWSLTGN-LLAVADANNVTLWK 285
+++ +++ + W G VL W +++ G L++VAD + +W+
Sbjct: 305 LFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWE 360
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 166 (63.5 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 67/239 (28%), Positives = 105/239 (43%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH D+V D++ D GK LA+ S+D +IK+ + + T+ GH V VA P
Sbjct: 148 GHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGF--ECIRTMHGHDHNVSSVA-IMPN- 203
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
G + S S D + +W+ Q + TF H+ V + P++ G +A S+D +
Sbjct: 204 GDHIVSASRDKTIKMWEV--QTGYC-VKTFTGHREWVRMVR--PNQDGTLIASCSNDQTV 258
Query: 129 SVFT-ATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGAL---VGLGLLD---PVQKLASC 181
V+ AT + + + H V +SWAP + + G P L S
Sbjct: 259 RVWVVATKECKAEL----REHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSG 314
Query: 182 GCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW 240
D T+K+W + G+ C L H +WVR V + G I S + D T+ +W
Sbjct: 315 SRDKTIKMWDISTGM----CLMTLVGHDNWVRGVLFHSG-G---KFILSCADDKTLRVW 365
Score = 138 (53.6 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 62/240 (25%), Positives = 97/240 (40%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHP-K 67
GH+ V VA+ G + +AS D +IK+ + + T GHR W V P +
Sbjct: 190 GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC--VKTFTGHRE--W-VRMVRPNQ 244
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHEL--GLSLACGSS- 124
G+++ASCS D V +W + +A +H+ V I+WAP +S A GS
Sbjct: 245 DGTLIASCSNDQTVRVWVVATKE--CKAE-LREHEHVVECISWAPESSYSTISEATGSET 301
Query: 125 --DGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCG 182
G F + D + + + ++ G L G + + SC
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSG----GKFILSCA 357
Query: 183 CDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC 242
D T++VW N C L H +V S+ + P + + S D TV +W C
Sbjct: 358 DDKTLRVWDFKN----KRCMKTLNAHEHFVTSLDFHKTA--PY--VVTGSVDQTVKVWEC 409
Score = 108 (43.1 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 36/131 (27%), Positives = 60/131 (45%)
Query: 2 PAQKIE-TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQ 60
P +K +GH V V + +AS D++IK+ + TLKGH V
Sbjct: 98 PPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER--TLKGHTDSVQD 155
Query: 61 VAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLA 120
+++ H G +LASCS D + +W + + T + H +V+S+A P+ G +
Sbjct: 156 ISFDHT--GKLLASCSADMTIKLW---DFQGFECIRTMHGHDHNVSSVAIMPN--GDHIV 208
Query: 121 CGSSDGNISVF 131
S D I ++
Sbjct: 209 SASRDKTIKMW 219
Score = 100 (40.3 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 31/113 (27%), Positives = 50/113 (44%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
+ S D T+K+W++ G C H +WVR V PN + IAS S D TV
Sbjct: 207 IVSASRDKTIKMWEVQTGY----CVKTFTGHREWVRMVR--PNQD--GTLIASCSNDQTV 258
Query: 238 VIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANNVTLWKEAVDG 290
+W A + + E L++ + V +SW+ + +++A K G
Sbjct: 259 RVWVVATKECKAE---LREHEHVVECISWAPESSYSTISEATGSETKKSGKPG 308
>RGD|620477 [details] [associations]
symbol:Cdc20 "cell division cycle 20" species:10116 "Rattus
norvegicus" [GO:0000922 "spindle pole" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005680 "anaphase-promoting
complex" evidence=IEA;ISO;ISS] [GO:0005813 "centrosome"
evidence=IDA] [GO:0007067 "mitosis" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA;ISO] [GO:0008284
"positive regulation of cell proliferation" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019899
"enzyme binding" evidence=IEA;ISO] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0031915 "positive regulation of
synaptic plasticity" evidence=IEA;ISO;ISS] [GO:0040020 "regulation
of meiosis" evidence=IEA;ISO] [GO:0043234 "protein complex"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050773 "regulation of dendrite development"
evidence=IMP] [GO:0051301 "cell division" evidence=IEA] [GO:0051488
"activation of anaphase-promoting complex activity"
evidence=IEA;ISO;ISS] [GO:0090129 "positive regulation of synapse
maturation" evidence=IEA;ISO;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 UniPathway:UPA00143 RGD:620477
GO:GO:0005813 GO:GO:0048471 GO:GO:0043234 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319 GO:GO:0016567
GO:GO:0005680 GO:GO:0050773 GO:GO:0000922 GO:GO:0031145
GO:GO:0090129 GO:GO:0031915 GO:GO:0040020 GO:GO:0051488 KO:K03363
CTD:991 HOGENOM:HOG000195514 HOVERGEN:HBG001024 OrthoDB:EOG4CC414
EMBL:U05341 EMBL:AF052695 EMBL:BC085691 IPI:IPI00382084 PIR:B56021
RefSeq:NP_741990.1 UniGene:Rn.9262 ProteinModelPortal:Q62623
IntAct:Q62623 STRING:Q62623 PhosphoSite:Q62623 PRIDE:Q62623
GeneID:64515 KEGG:rno:64515 UCSC:RGD:620477 InParanoid:Q62623
NextBio:613310 ArrayExpress:Q62623 Genevestigator:Q62623
GermOnline:ENSRNOG00000028415 Uniprot:Q62623
Length = 499
Score = 148 (57.2 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 39/118 (33%), Positives = 59/118 (50%)
Query: 44 ASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEG-NQNDWTQAHTFNDHK 102
A H+ATL GH V + WA P G LAS D V +W G ++ W TF H+
Sbjct: 298 AEHHVATLSGHSQEVCGLRWA-PD-GRHLASGGNDNIVNVWPSGPGESGWVPLQTFTQHQ 355
Query: 103 SSVNSIAWAPHELG-LSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAP 159
+V ++AW P + L+ G+SD +I ++ + G + +D H V S+ W+P
Sbjct: 356 GAVKAVAWCPWQSNILATGGGTSDRHIRIWNVCS--GACLSAVD-VHSQ-VCSILWSP 409
Score = 60 (26.2 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 185 NTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC 242
N + +WK Y + K+ L+ H+ V S+ +P+ G +T+ASA+ D T+ +W C
Sbjct: 423 NQLVIWK-YPTMAKV---AELKGHTARVLSLTMSPD-G---ATVASAAADETLRLWRC 472
Score = 39 (18.8 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 5/16 (31%), Positives = 11/16 (68%)
Query: 178 LASCGCDNTVKVWKMY 193
+AS D T+++W+ +
Sbjct: 458 VASAAADETLRLWRCF 473
>UNIPROTKB|Q62623 [details] [associations]
symbol:Cdc20 "Cell division cycle protein 20 homolog"
species:10116 "Rattus norvegicus" [GO:0008022 "protein C-terminus
binding" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0040020 "regulation of meiosis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 RGD:620477 GO:GO:0005813 GO:GO:0048471
GO:GO:0043234 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284
eggNOG:COG2319 GO:GO:0016567 GO:GO:0005680 GO:GO:0050773
GO:GO:0000922 GO:GO:0031145 GO:GO:0090129 GO:GO:0031915
GO:GO:0040020 GO:GO:0051488 KO:K03363 CTD:991 HOGENOM:HOG000195514
HOVERGEN:HBG001024 OrthoDB:EOG4CC414 EMBL:U05341 EMBL:AF052695
EMBL:BC085691 IPI:IPI00382084 PIR:B56021 RefSeq:NP_741990.1
UniGene:Rn.9262 ProteinModelPortal:Q62623 IntAct:Q62623
STRING:Q62623 PhosphoSite:Q62623 PRIDE:Q62623 GeneID:64515
KEGG:rno:64515 UCSC:RGD:620477 InParanoid:Q62623 NextBio:613310
ArrayExpress:Q62623 Genevestigator:Q62623
GermOnline:ENSRNOG00000028415 Uniprot:Q62623
Length = 499
Score = 148 (57.2 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 39/118 (33%), Positives = 59/118 (50%)
Query: 44 ASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEG-NQNDWTQAHTFNDHK 102
A H+ATL GH V + WA P G LAS D V +W G ++ W TF H+
Sbjct: 298 AEHHVATLSGHSQEVCGLRWA-PD-GRHLASGGNDNIVNVWPSGPGESGWVPLQTFTQHQ 355
Query: 103 SSVNSIAWAPHELG-LSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAP 159
+V ++AW P + L+ G+SD +I ++ + G + +D H V S+ W+P
Sbjct: 356 GAVKAVAWCPWQSNILATGGGTSDRHIRIWNVCS--GACLSAVD-VHSQ-VCSILWSP 409
Score = 60 (26.2 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 185 NTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC 242
N + +WK Y + K+ L+ H+ V S+ +P+ G +T+ASA+ D T+ +W C
Sbjct: 423 NQLVIWK-YPTMAKV---AELKGHTARVLSLTMSPD-G---ATVASAAADETLRLWRC 472
Score = 39 (18.8 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 5/16 (31%), Positives = 11/16 (68%)
Query: 178 LASCGCDNTVKVWKMY 193
+AS D T+++W+ +
Sbjct: 458 VASAAADETLRLWRCF 473
>UNIPROTKB|Q12834 [details] [associations]
symbol:CDC20 "Cell division cycle protein 20 homolog"
species:9606 "Homo sapiens" [GO:0051301 "cell division"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0040020 "regulation of meiosis" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050773
"regulation of dendrite development" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0051488 "activation of anaphase-promoting complex activity"
evidence=IDA] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA;TAS]
[GO:0005680 "anaphase-promoting complex" evidence=IDA] [GO:0090129
"positive regulation of synapse maturation" evidence=ISS]
[GO:0031915 "positive regulation of synaptic plasticity"
evidence=ISS] [GO:0005819 "spindle" evidence=TAS] [GO:0007049 "cell
cycle" evidence=TAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0007094 "mitotic spindle assembly checkpoint" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] Reactome:REACT_6850 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 UniPathway:UPA00143 GO:GO:0005829
GO:GO:0005813 GO:GO:0048471 Reactome:REACT_6900
Reactome:REACT_115566 GO:GO:0043234 GO:GO:0005654
Reactome:REACT_21300 GO:GO:0051301 GO:GO:0007094 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
EMBL:CH471059 GO:GO:0008284 eggNOG:COG2319 GO:GO:0016567
GO:GO:0051436 GO:GO:0050773 GO:GO:0000922 Reactome:REACT_8017
GO:GO:0031145 GO:GO:0090129 GO:GO:0031915 GO:GO:0051437
GO:GO:0040020 GO:GO:0000236 PDB:4GGD PDBsum:4GGD GO:GO:0051488
KO:K03363 EMBL:U05340 EMBL:AF099644 EMBL:AK312780 EMBL:BT007388
EMBL:DQ473545 EMBL:AL139289 EMBL:BC000624 EMBL:BC001088
EMBL:BC006272 EMBL:BC009425 EMBL:BC009426 EMBL:BC010044
EMBL:BC012803 EMBL:BC012827 EMBL:BC013303 EMBL:BC015998
EMBL:BC024257 EMBL:BC031294 EMBL:BC110321 IPI:IPI00329526
PIR:A56021 RefSeq:NP_001246.2 UniGene:Hs.524947 PDB:4GGA PDB:4GGC
PDBsum:4GGA PDBsum:4GGC ProteinModelPortal:Q12834 SMR:Q12834
DIP:DIP-29655N IntAct:Q12834 MINT:MINT-2211271 STRING:Q12834
PhosphoSite:Q12834 DMDM:37537762 PaxDb:Q12834 PRIDE:Q12834
DNASU:991 Ensembl:ENST00000310955 Ensembl:ENST00000372462
GeneID:991 KEGG:hsa:991 UCSC:uc001cix.3 CTD:991
GeneCards:GC01P043824 H-InvDB:HIX0034879 HGNC:HGNC:1723
HPA:CAB004525 MIM:603618 neXtProt:NX_Q12834 PharmGKB:PA26257
HOGENOM:HOG000195514 HOVERGEN:HBG001024 InParanoid:Q12834
OMA:RTPGKSN OrthoDB:EOG4CC414 PhylomeDB:Q12834 GenomeRNAi:991
NextBio:4160 PMAP-CutDB:Q12834 ArrayExpress:Q12834 Bgee:Q12834
CleanEx:HS_CDC20 Genevestigator:Q12834 GermOnline:ENSG00000117399
Uniprot:Q12834
Length = 499
Score = 146 (56.5 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 39/118 (33%), Positives = 58/118 (49%)
Query: 44 ASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEG-NQNDWTQAHTFNDHK 102
A H+ATL GH V + WA P G LAS D V +W + W TF H+
Sbjct: 298 AEHHVATLSGHSQEVCGLRWA-PD-GRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQ 355
Query: 103 SSVNSIAWAPHELG-LSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAP 159
+V ++AW P + L+ G+SD +I ++ + G + +D AH V S+ W+P
Sbjct: 356 GAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS--GACLSAVD-AHSQ-VCSILWSP 409
Score = 62 (26.9 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 185 NTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC 242
N + +WK Y + K+ L+ H+ V S+ +P+ G +T+ASA+ D T+ +W C
Sbjct: 423 NQLVIWK-YPTMAKV---AELKGHTSRVLSLTMSPD-G---ATVASAAADETLRLWRC 472
Score = 39 (18.8 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 5/16 (31%), Positives = 11/16 (68%)
Query: 178 LASCGCDNTVKVWKMY 193
+AS D T+++W+ +
Sbjct: 458 VASAAADETLRLWRCF 473
>UNIPROTKB|F1MNS4 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 IPI:IPI00711976 UniGene:Bt.20483 OMA:HHFRGSP
GeneTree:ENSGT00690000102183 EMBL:DAAA02057306
ProteinModelPortal:F1MNS4 Ensembl:ENSBTAT00000027147 Uniprot:F1MNS4
Length = 800
Score = 139 (54.0 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 41/132 (31%), Positives = 64/132 (48%)
Query: 1 MPAQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQ 60
+ AQ + H+ ++ VA+ K LAT S D + K+ L Q L T GHR +W
Sbjct: 469 LQAQATQRCHDKDINSVAVAPNDKLLATGSQDRTAKLWALPRC--QLLGTFSGHRRGLWC 526
Query: 61 VAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLA 120
V ++ P +LA+ S DG + +W D++ TF H +SV +A+ G L
Sbjct: 527 VQFS-P-MDQVLATASADGTIKLWA---LQDFSCLKTFEGHDASVLKVAFVSR--GTQLL 579
Query: 121 CGSSDGNISVFT 132
SDG + ++T
Sbjct: 580 SSGSDGLLKLWT 591
Score = 100 (40.3 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 33/117 (28%), Positives = 50/117 (42%)
Query: 176 QKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDG 235
Q LA+ D T+K+W + + C + H V VA+ G + + S+ DG
Sbjct: 534 QVLATASADGTIKLWALQD----FSCLKTFEGHDASVLKVAFVSR-G---TQLLSSGSDG 585
Query: 236 TVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWS-LTGNLLAVADANNVTLWKEAVDGE 291
+ +WT K E R L + VW + S L L A + V LWK+ + E
Sbjct: 586 LLKLWTI-KNNECV--RTLDAHEDKVWGLHCSRLDDRALTGASDSRVVLWKDVTEAE 639
Score = 75 (31.5 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 21/80 (26%), Positives = 33/80 (41%)
Query: 177 KLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGT 236
+L S G D +K+W + N +C L H D V W + + + D
Sbjct: 577 QLLSSGSDGLLKLWTIKNN----ECVRTLDAHEDKV----WGLHCSRLDDRALTGASDSR 628
Query: 237 VVIWTCAKEGEQWEGRVLKD 256
VV+W E EQ E + ++
Sbjct: 629 VVLWKDVTEAEQAEEQAKRE 648
Score = 64 (27.6 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 41/188 (21%), Positives = 70/188 (37%)
Query: 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFG 69
H V +A D LAT D ++++ + H +G G V VA+ HP
Sbjct: 108 HTAPVATMAFDPTSTLLATGGCDGAVRVWDVVRCYGTH--HFRGSPGVVHLVAF-HPDPA 164
Query: 70 SILA-SCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
+L S + D + +W + + + H S+V S+ ++ G ++ D I
Sbjct: 165 RLLLFSSAADTSIRVW---SLQERSCLAVLTAHYSAVTSLTFSAD--GHTMLSSGRD-KI 218
Query: 129 SVFTATADGGWDTTRIDQAHPVGV-TSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTV 187
V WD + V V SV A + LG+ + G +
Sbjct: 219 CVI-------WDLRSLQATRTVPVFESVEAAVLLPEEPAPELGVKSAGLHFLTAGDQGAL 271
Query: 188 KVWKMYNG 195
+VW+ +G
Sbjct: 272 RVWEAASG 279
>TAIR|locus:2057381 [details] [associations]
symbol:emb1345 "AT2G26060" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0000394 "RNA splicing,
via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0009086 "methionine biosynthetic process" evidence=RCA]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AC004747 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:AY093154
EMBL:AY085277 EMBL:BT003394 IPI:IPI00536484 PIR:T02617
RefSeq:NP_565615.1 UniGene:At.38940 ProteinModelPortal:O80990
SMR:O80990 PaxDb:O80990 PRIDE:O80990 EnsemblPlants:AT2G26060.1
GeneID:817147 KEGG:ath:AT2G26060 TAIR:At2g26060 InParanoid:O80990
PhylomeDB:O80990 ProtClustDB:CLSN2917143 ArrayExpress:O80990
Genevestigator:O80990 Uniprot:O80990
Length = 352
Score = 163 (62.4 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 71/250 (28%), Positives = 104/250 (41%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIG-LSNSASQHLATLKGHRGPVWQVAWAHPK 67
GHE+ V V+ + G LAT S D S+ I L + A L GH V V W HP
Sbjct: 116 GHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQW-HPT 174
Query: 68 FGSILASCSYDGQVIIW-KEGNQNDWTQAHTF----NDHKSSVNSIAWAPHELGLSLACG 122
+L SCSYD + +W E + ++ T N H S+V SI++ + G +
Sbjct: 175 M-DVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISF--NAAGDKMVTC 231
Query: 123 SSDGNISVF---TATADGG-----W-DTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLD 173
S D + ++ A G W + H + S W+ ++ G D
Sbjct: 232 SDDLTLKIWGTDIAKMQSGEEYAPWIHLCTLSGYHDRTIYSAHWSR----DDIIASGAGD 287
Query: 174 PVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQ 233
+L ++V YN + K + + H + V SV W+P G +ASAS
Sbjct: 288 NAIRLFVDSKHDSVD-GPSYNLLLKKN-----KAHENDVNSVQWSPGEG--NRLLASASD 339
Query: 234 DGTVVIWTCA 243
DG V IW A
Sbjct: 340 DGMVKIWQLA 349
Score = 137 (53.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 40/126 (31%), Positives = 61/126 (48%)
Query: 176 QKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDG 235
Q LA+ D T +WK Y + +C L+ H + V+SV+W + G S +A+ S+D
Sbjct: 87 QLLATASFDGTTGIWKNYGS--EFECISTLEGHENEVKSVSWNAS-G---SCLATCSRDK 140
Query: 236 TVVIWTCAKEGEQWE-GRVLKDFKTPVWSVSWSLTGNLLAVADANNV--TLWKEAVDGEW 292
+V IW EG +++ VL V V W T ++L +N W E DGE+
Sbjct: 141 SVWIWEVL-EGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVWWSEDDDGEY 199
Query: 293 QQVSVV 298
Q V +
Sbjct: 200 QCVQTL 205
Score = 122 (48.0 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 75/318 (23%), Positives = 123/318 (38%)
Query: 4 QKIETGHEDTVHDVAM-------DFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRG 56
QK+E GH D V VA D LA+ S D++++I S+ T K
Sbjct: 14 QKLE-GHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRI--WEQSSLSRSWTCK---- 66
Query: 57 PVWQVAWAHPKFGSILASCSYD--GQVIIWK--EGNQNDWTQ-------AHTFNDHKSSV 105
V + H + + SC++ GQ++ +G W T H++ V
Sbjct: 67 TVLEET--HTR---TVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEV 121
Query: 106 NSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGA 165
S++W + G LA S D ++ ++ +D + H V V W P M
Sbjct: 122 KSVSW--NASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTM---- 175
Query: 166 LVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPK 225
L SC DNT+KVW + + C L ++ S W+ +
Sbjct: 176 ----------DVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAG 225
Query: 226 STIASASQDGTVVIW--TCAK--EGEQWEGRV----LKDFKT-PVWSVSWSLTGNLLAVA 276
+ + S D T+ IW AK GE++ + L + ++S WS + + A
Sbjct: 226 DKMVTCSDDLTLKIWGTDIAKMQSGEEYAPWIHLCTLSGYHDRTIYSAHWSRDDIIASGA 285
Query: 277 DANNVTLW----KEAVDG 290
N + L+ ++VDG
Sbjct: 286 GDNAIRLFVDSKHDSVDG 303
Score = 118 (46.6 bits), Expect = 0.00019, P = 0.00019
Identities = 36/101 (35%), Positives = 52/101 (51%)
Query: 205 LQMHSDWVRSVAWAP---NLGLPKSTIASASQDGTVVIWTCAKEGEQWEGR-VLKDFKT- 259
L+ H+D V SVAW P + +AS S D TV IW + W + VL++ T
Sbjct: 16 LEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTR 75
Query: 260 PVWSVSWSLTGNLLAVADANNVT-LWKEAVDGEWQQVSVVE 299
V S +WS +G LLA A + T +WK E++ +S +E
Sbjct: 76 TVRSCAWSPSGQLLATASFDGTTGIWKN-YGSEFECISTLE 115
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 134 (52.2 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 44/158 (27%), Positives = 64/158 (40%)
Query: 8 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPK 67
+GH + V + A GK + D++++I + S H TLKGH V QVAW+ P
Sbjct: 137 SGHTEAVLNCAFSPDGKGFVSVGGDTTVRIWDIYTSTPTH--TLKGHTNWVLQVAWS-PD 193
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELG---LSLACGSS 124
I A+ +G + IW Q T H + ++W P L + LA S
Sbjct: 194 SKKI-ATAGMEGDIRIWCP--QTGKQLGSTLKGHTKFITGLSWEPFHLNPKCVRLASSSK 250
Query: 125 DGNISVFTATADGGWDTTRIDQ-----AHPVGVTSVSW 157
D I + WDT H + VT + W
Sbjct: 251 DSTIRI--------WDTESCKNLMSLSGHTMSVTCLKW 280
Score = 123 (48.4 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 36/125 (28%), Positives = 57/125 (45%)
Query: 8 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPK 67
TGH+ ++ V+ G+ A+AS D SIK+ + + L +GH G V+QV W+
Sbjct: 391 TGHQQLINLVSFSPDGRYFASASFDKSIKL--WDGQSGKFLGNFRGHVGAVYQVCWSSDS 448
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGN 127
L S S D + IW + H V ++ W+P G +A GS D
Sbjct: 449 --RYLVSGSKDSTLKIWDIKTKK---MEKELPGHADEVYTVDWSPD--GDRVASGSKDRL 501
Query: 128 ISVFT 132
+ ++T
Sbjct: 502 LRIWT 506
Score = 116 (45.9 bits), Expect = 0.00057, P = 0.00057
Identities = 29/87 (33%), Positives = 44/87 (50%)
Query: 180 SCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVI 239
S G D TV++W +Y L+ H++WV VAW+P+ IA+A +G + I
Sbjct: 157 SVGGDTTVRIWDIYTSTPTH----TLKGHTNWVLQVAWSPD----SKKIATAGMEGDIRI 208
Query: 240 WTCAKEGEQWEGRVLKDFKTPVWSVSW 266
W C + G+Q G LK + +SW
Sbjct: 209 W-CPQTGKQL-GSTLKGHTKFITGLSW 233
Score = 75 (31.5 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
L S D+T+K+W + KM+ L H+D V +V W+P+ G +AS S+D +
Sbjct: 451 LVSGSKDSTLKIWDIKTK--KME--KELPGHADEVYTVDWSPD-G---DRVASGSKDRLL 502
Query: 238 VIWT 241
IWT
Sbjct: 503 RIWT 506
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 164 (62.8 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 66/239 (27%), Positives = 106/239 (44%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH D+V D++ D GK LA+ S+D +IK+ + + T+ GH V VA P
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF--ECIRTMHGHDHNVSSVA-IMPN- 203
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
G + S + D + +W+ Q + TF H+ V + P++ G +A S+D +
Sbjct: 204 GDHIVSAARDKTIKMWEV--QTGYC-VKTFTGHREWVRMVR--PNQDGTLIASCSNDQTV 258
Query: 129 SVFT-ATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGAL---VGLGLLD---PVQKLASC 181
V+ AT + + + H V +SWAP + ++ G P L S
Sbjct: 259 RVWVVATKECKAEL----REHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 182 GCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW 240
D T+K+W + G+ C L H +WVR V + G I S + D T+ +W
Sbjct: 315 SRDKTIKMWDVSTGM----CLMTLVGHDNWVRGVLFHSG-G---KFILSCADDKTLRVW 365
Score = 137 (53.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 61/240 (25%), Positives = 97/240 (40%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHP-K 67
GH+ V VA+ G + +A+ D +IK+ + + T GHR W V P +
Sbjct: 190 GHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYC--VKTFTGHRE--W-VRMVRPNQ 244
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHEL--GLSLACGSS- 124
G+++ASCS D V +W + +A +H+ V I+WAP +S A GS
Sbjct: 245 DGTLIASCSNDQTVRVWVVATKE--CKAE-LREHEHVVECISWAPESSYSSISEATGSET 301
Query: 125 --DGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCG 182
G F + D + + + ++ G L G + + SC
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSG----GKFILSCA 357
Query: 183 CDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC 242
D T++VW N C L H +V S+ + P + + S D TV +W C
Sbjct: 358 DDKTLRVWDYKN----KRCMKTLNAHEHFVTSLDFHKTA--PY--VVTGSVDQTVKVWEC 409
Score = 105 (42.0 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 35/131 (26%), Positives = 60/131 (45%)
Query: 2 PAQKIE-TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQ 60
P +K +GH V V + +AS D++IK+ + TLKGH V
Sbjct: 98 PPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER--TLKGHTDSVQD 155
Query: 61 VAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLA 120
+++ H G +LASCS D + +W + + T + H +V+S+A P+ G +
Sbjct: 156 ISFDHS--GKLLASCSADMTIKLW---DFQGFECIRTMHGHDHNVSSVAIMPN--GDHIV 208
Query: 121 CGSSDGNISVF 131
+ D I ++
Sbjct: 209 SAARDKTIKMW 219
Score = 101 (40.6 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 31/113 (27%), Positives = 51/113 (45%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
+ S D T+K+W++ G C H +WVR V PN + IAS S D TV
Sbjct: 207 IVSAARDKTIKMWEVQTGY----CVKTFTGHREWVRMVR--PNQD--GTLIASCSNDQTV 258
Query: 238 VIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANNVTLWKEAVDG 290
+W A + + E L++ + V +SW+ + ++++A K G
Sbjct: 259 RVWVVATKECKAE---LREHEHVVECISWAPESSYSSISEATGSETKKSGKPG 308
>ZFIN|ZDB-GENE-040426-1192 [details] [associations]
symbol:tbl1xr1 "transducin (beta)-like 1 X-linked
receptor 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040426-1192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
EMBL:CT027646 IPI:IPI00854144 Ensembl:ENSDART00000085132
Bgee:F1Q5U2 Uniprot:F1Q5U2
Length = 511
Score = 132 (51.5 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 50/171 (29%), Positives = 73/171 (42%)
Query: 54 HRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPH 113
H P V W + + ASCS D + + K G + TF H + VN+I W P
Sbjct: 303 HSAPALDVDW---QSNNTFASCSTDMCIHVCKLGQERP---IKTFQGHTNEVNAIKWDP- 355
Query: 114 ELGLSLACGSSDGNISVFTATADGGWDTTRID-QAHPVGVTSVSWAPAMAPGALVGLGLL 172
G LA S D + +++ D T D QAH + ++ W+P G G
Sbjct: 356 -TGNLLASCSDDMTLKLWSMKQD----TCVHDLQAHSKEIYTIKWSPT-------GPGTN 403
Query: 173 DPVQKLA---SCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPN 220
+P L S D+TV++W G C L H + V SVA++P+
Sbjct: 404 NPNANLMLARSASFDSTVRLWDAERGA----CIHTLTKHQEPVYSVAFSPD 450
Score = 116 (45.9 bits), Expect = 0.00057, P = 0.00057
Identities = 37/137 (27%), Positives = 62/137 (45%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWA---- 64
GH + V+ + D G LA+ S D ++K+ + H L+ H ++ + W+
Sbjct: 343 GHTNEVNAIKWDPTGNLLASCSDDMTLKLWSMKQDTCVH--DLQAHSKEIYTIKWSPTGP 400
Query: 65 ---HPKFGSILA-SCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLA 120
+P +LA S S+D V +W + HT H+ V S+A++P G LA
Sbjct: 401 GTNNPNANLMLARSASFDSTVRLW---DAERGACIHTLTKHQEPVYSVAFSPD--GRHLA 455
Query: 121 CGSSDGNISVFTATADG 137
GS D + ++ T G
Sbjct: 456 SGSFDKCVHIWN-TQSG 471
Score = 114 (45.2 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 41/121 (33%), Positives = 57/121 (47%)
Query: 173 DPVQKL-ASCGCDNTVKVWKMYNGIWKMD-CFPALQMHSDWVRSVAWAPN---LGLPKST 227
DP L ASC D T+K+W M K D C LQ HS + ++ W+P P +
Sbjct: 354 DPTGNLLASCSDDMTLKLWSM-----KQDTCVHDLQAHSKEIYTIKWSPTGPGTNNPNAN 408
Query: 228 IA---SASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTL 283
+ SAS D TV +W A+ G L + PV+SV++S G LA + V +
Sbjct: 409 LMLARSASFDSTVRLWD-AERGACIH--TLTKHQEPVYSVAFSPDGRHLASGSFDKCVHI 465
Query: 284 W 284
W
Sbjct: 466 W 466
Score = 99 (39.9 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 35/113 (30%), Positives = 48/113 (42%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
+ S G D T +W + G K FP HS V W N +T AS S D +
Sbjct: 277 ILSAGVDKTTIIWDAHTGEAKQQ-FP---FHSAPALDVDWQSN-----NTFASCSTD--M 325
Query: 238 VIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLA-VADANNVTLWKEAVD 289
I C K G++ + + V ++ W TGNLLA +D + LW D
Sbjct: 326 CIHVC-KLGQERPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKLWSMKQD 377
Score = 97 (39.2 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 39/125 (31%), Positives = 56/125 (44%)
Query: 1 MPAQK--IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSAS--------QHLAT 50
+PA K + GHE V A + LA+ S DS+ +I LS S++ +H
Sbjct: 153 IPASKAMVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSESSTGGSTQLVLRHCIR 212
Query: 51 LKGHRGP----VWQVAWAHPKFGSILASCSYDGQVIIW-KEGNQNDWTQAHTFNDHKSSV 105
G P V + W G++LA+ SYDG IW K+GN A T HK +
Sbjct: 213 EGGQDVPSNKDVTSLDWNSE--GTLLATGSYDGFARIWTKDGNL-----ASTLGQHKGPI 265
Query: 106 NSIAW 110
++ W
Sbjct: 266 FALKW 270
Score = 86 (35.3 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 36/137 (26%), Positives = 56/137 (40%)
Query: 23 GKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVI 82
G LAT S D +I + + +TL H+GP++ + W K G+ + S D I
Sbjct: 233 GTLLATGSYDGFARIWTKDGNLA---STLGQHKGPIFALKWN--KKGNFILSAGVDKTTI 287
Query: 83 IWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTT 142
IW + + + Q F H + + W + S C S+D I V G
Sbjct: 288 IW-DAHTGEAKQQFPF--HSAPALDVDWQSNNTFAS--C-STDMCIHVCKL---GQERPI 338
Query: 143 RIDQAHPVGVTSVSWAP 159
+ Q H V ++ W P
Sbjct: 339 KTFQGHTNEVNAIKWDP 355
>UNIPROTKB|Q2KJJ5 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 EMBL:BC105313
IPI:IPI00711976 RefSeq:NP_001040084.2 UniGene:Bt.20483
ProteinModelPortal:Q2KJJ5 STRING:Q2KJJ5 PRIDE:Q2KJJ5 GeneID:618429
KEGG:bta:618429 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
InParanoid:Q2KJJ5 KO:K14555 OrthoDB:EOG42JNQR NextBio:20901180
Uniprot:Q2KJJ5
Length = 800
Score = 138 (53.6 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 41/132 (31%), Positives = 64/132 (48%)
Query: 1 MPAQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQ 60
+ AQ + H+ ++ VA+ K LAT S D + K+ L Q L T GHR +W
Sbjct: 469 LQAQATQHCHDKDINSVAVAPNDKLLATGSQDRTAKLWALPRC--QLLGTFSGHRRGLWC 526
Query: 61 VAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLA 120
V ++ P +LA+ S DG + +W D++ TF H +SV +A+ G L
Sbjct: 527 VQFS-P-MDQVLATASADGTIKLWA---LQDFSCLKTFEGHDASVLKVAFVSR--GTQLL 579
Query: 121 CGSSDGNISVFT 132
SDG + ++T
Sbjct: 580 SSGSDGLLKLWT 591
Score = 100 (40.3 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 33/117 (28%), Positives = 50/117 (42%)
Query: 176 QKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDG 235
Q LA+ D T+K+W + + C + H V VA+ G + + S+ DG
Sbjct: 534 QVLATASADGTIKLWALQD----FSCLKTFEGHDASVLKVAFVSR-G---TQLLSSGSDG 585
Query: 236 TVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWS-LTGNLLAVADANNVTLWKEAVDGE 291
+ +WT K E R L + VW + S L L A + V LWK+ + E
Sbjct: 586 LLKLWTI-KNNECV--RTLDAHEDKVWGLHCSRLDDRALTGASDSRVVLWKDVTEAE 639
Score = 75 (31.5 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 21/80 (26%), Positives = 33/80 (41%)
Query: 177 KLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGT 236
+L S G D +K+W + N +C L H D V W + + + D
Sbjct: 577 QLLSSGSDGLLKLWTIKNN----ECVRTLDAHEDKV----WGLHCSRLDDRALTGASDSR 628
Query: 237 VVIWTCAKEGEQWEGRVLKD 256
VV+W E EQ E + ++
Sbjct: 629 VVLWKDVTEAEQAEEQAKRE 648
Score = 64 (27.6 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 41/188 (21%), Positives = 70/188 (37%)
Query: 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFG 69
H V +A D LAT D ++++ + H +G G V VA+ HP
Sbjct: 108 HTAPVATMAFDPTSTLLATGGCDGAVRVWDVVRCYGTH--HFRGSPGVVHLVAF-HPDPA 164
Query: 70 SILA-SCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
+L S + D + +W + + + H S+V S+ ++ G ++ D I
Sbjct: 165 RLLLFSSAADTSIRVW---SLQERSCLAVLTAHYSAVTSLTFSAD--GHTMLSSGRD-KI 218
Query: 129 SVFTATADGGWDTTRIDQAHPVGV-TSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTV 187
V WD + V V SV A + LG+ + G +
Sbjct: 219 CVI-------WDLRSLQATRTVPVFESVEAAVLLPEEPAPELGVKSAGLHFLTAGDQGAL 271
Query: 188 KVWKMYNG 195
+VW+ +G
Sbjct: 272 RVWEAASG 279
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 139 (54.0 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 57/177 (32%), Positives = 73/177 (41%)
Query: 25 RLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIW 84
RLAT S D++ +I +H TLKGH G V V+W+ P G+ LA+CS D V IW
Sbjct: 167 RLATGSGDNTARIWDAETGTPKH--TLKGHAGWVLGVSWS-PD-GTRLATCSMDKTVRIW 222
Query: 85 --KEGNQNDWTQAHTFNDHKSSVNSIAWAPHEL---GLS-LACGSSDGNISVFTATADGG 138
+ G Q H V IAW P L G L S D ++T
Sbjct: 223 DPETGKQ----VGSELKGHAKWVQGIAWEPLHLWRDGTPRLVSASKDFTARIWTVNTGR- 277
Query: 139 WDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNG 195
T + H V+ V W GA G G++ + D TVKVW G
Sbjct: 278 --TEHVLSGHKGSVSCVRW------GAGNGTGVV------YTASHDKTVKVWDAVKG 320
Score = 129 (50.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 57/196 (29%), Positives = 82/196 (41%)
Query: 105 VNSIAWAPHEL---GLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAM 161
V +++ H + G + C S AT G +T RI A G T
Sbjct: 138 VQAVSRLAHRIPGHGEPILCAQFSPASSARLATGSGD-NTARIWDAE-TG-TPKHTLKGH 194
Query: 162 APGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAP-N 220
A G ++G+ +LA+C D TV++W G L+ H+ WV+ +AW P +
Sbjct: 195 A-GWVLGVSWSPDGTRLATCSMDKTVRIWDPETG---KQVGSELKGHAKWVQGIAWEPLH 250
Query: 221 L---GLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSL---TGNLLA 274
L G P+ + SAS+D T IWT G VL K V V W TG +
Sbjct: 251 LWRDGTPR--LVSASKDFTARIWT-VNTGRT--EHVLSGHKGSVSCVRWGAGNGTGVVYT 305
Query: 275 VADANNVTLWKEAVDG 290
+ V +W +AV G
Sbjct: 306 ASHDKTVKVW-DAVKG 320
Score = 107 (42.7 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 51/194 (26%), Positives = 78/194 (40%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWA--HP 66
GH V V+ G RLAT S D +++I + Q + LKGH V +AW H
Sbjct: 193 GHAGWVLGVSWSPDGTRLATCSMDKTVRIWD-PETGKQVGSELKGHAKWVQGIAWEPLHL 251
Query: 67 -KFGSI-LASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSS 124
+ G+ L S S D IW N H + HK SV+ + W G+
Sbjct: 252 WRDGTPRLVSASKDFTARIW---TVNTGRTEHVLSGHKGSVSCVRW-----------GAG 297
Query: 125 DGNISVFTATADGG---WDTTRIDQAHPVGVTSVSWAP--AMAPGALVGLGLLDPVQKLA 179
+G V+TA+ D WD + H + + W A++ + G D + +
Sbjct: 298 NGTGVVYTASHDKTVKVWDAVKGTLLHDLK-SHAHWVNHLALSTDFVCRTGFFDHTKTVP 356
Query: 180 SCGCDNTVKVWKMY 193
+ + T K + Y
Sbjct: 357 ATAEEKTAKAKERY 370
Score = 69 (29.3 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 27/109 (24%), Positives = 48/109 (44%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
+AS G DN K+W +G + L+ H V +++ + L + +AS+D T+
Sbjct: 428 IASAGWDNATKLWNARDGKF----INTLRGHVAPVYQCSFSADSRL----LVTASKDTTL 479
Query: 238 VIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWK 285
+W + G+ L + V+ V WS G + + V LW+
Sbjct: 480 KVWN-VRTGKL--ATDLPGHEDEVYGVDWSPDGQRVGSGGRDKAVRLWR 525
Score = 60 (26.2 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 21/66 (31%), Positives = 37/66 (56%)
Query: 228 IASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANNVT-LWKE 286
+ SAS D T+ ++ +G + R++ K V V++S G+++A A +N T LW
Sbjct: 384 LVSASDDFTMYLFDPLNDGTKPIARMIGHQKQ-VNHVTFSPDGSMIASAGWDNATKLWN- 441
Query: 287 AVDGEW 292
A DG++
Sbjct: 442 ARDGKF 447
>TAIR|locus:2123752 [details] [associations]
symbol:AT4G32990 "AT4G32990" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 IPI:IPI00532927 RefSeq:NP_195025.5 UniGene:At.54584
ProteinModelPortal:F4JVW1 SMR:F4JVW1 EnsemblPlants:AT4G32990.1
GeneID:829436 KEGG:ath:AT4G32990 OMA:WKLASEP Uniprot:F4JVW1
Length = 328
Score = 161 (61.7 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 75/291 (25%), Positives = 115/291 (39%)
Query: 42 NSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKE--------------- 86
N + + L+GH VW VAW +P ++ASCS D V IW++
Sbjct: 7 NLGLEEVQKLEGHTDRVWNVAW-NPAADGVIASCSADKTVRIWEQSSLTRSWTCKLGHRL 65
Query: 87 ----GNQNDWTQAHTFND-------HKSSVNSIAWAPHELGLSLA-CGSSDGNISVFTAT 134
GN W T ++ H+S V S++W + G LA CG D ++ ++
Sbjct: 66 GSFDGNTCVWENFATDSESVSVLRGHESEVKSVSW--NASGSLLATCGR-DKSVWIWEIQ 122
Query: 135 A--DGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKM 192
D +DT + H V V W P M L SC DNT+K+W
Sbjct: 123 PEEDDEFDTIAVLTGHSEDVKMVLWHPTM--------------DVLFSCSYDNTIKIWCS 168
Query: 193 YNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW-TCAKEGEQWEG 251
+ +C L ++ S W+ + + + S D V IW T + EG
Sbjct: 169 EDEDGDYNCVQTLSELNNGHSSTVWSISFNAAGDKMVTCSDDLAVKIWKTDISRMQSGEG 228
Query: 252 RV-------LKDFKT-PVWSVSWSLTGNLLAVADANNVTLW----KEAVDG 290
V L F ++SV WS G + + A + + L+ ++VDG
Sbjct: 229 YVPWTHVCTLSGFHDRTIYSVHWSRDGVIASGAGDDTIQLFVDSDSDSVDG 279
Score = 158 (60.7 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 72/255 (28%), Positives = 101/255 (39%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQH---LATLKGHRGPVWQVAWAH 65
GHE V V+ + G LAT D S+ I + +A L GH V V W H
Sbjct: 90 GHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIAVLTGHSEDVKMVLW-H 148
Query: 66 PKFGSILASCSYDGQVIIW-KEGNQNDWTQAHTF----NDHKSSVNSIAWAPHELGLSLA 120
P +L SCSYD + IW E D+ T N H S+V SI++ + G +
Sbjct: 149 PTM-DVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVWSISF--NAAGDKMV 205
Query: 121 CGSSDGNISVFTA------TADG--GWD-TTRIDQAHPVGVTSVSWAPAMAPGALV-GLG 170
S D + ++ + +G W + H + SV W+ G + G G
Sbjct: 206 TCSDDLAVKIWKTDISRMQSGEGYVPWTHVCTLSGFHDRTIYSVHWS---RDGVIASGAG 262
Query: 171 LLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIAS 230
D +Q D+ Y + K + + H V SV WAP+ +AS
Sbjct: 263 D-DTIQLFVDSDSDSVDG--PSYKLLVKKE-----KAHEMDVNSVQWAPDK--ESRLLAS 312
Query: 231 ASQDGTVVIWTCAKE 245
AS D V IW A E
Sbjct: 313 ASDDKMVKIWKLASE 327
Score = 117 (46.2 bits), Expect = 0.00021, P = 0.00021
Identities = 55/206 (26%), Positives = 86/206 (41%)
Query: 8 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSN-----SASQHLATLK-GHRGPVWQV 61
TGH + V V L + S D++IKI + + Q L+ L GH VW +
Sbjct: 136 TGHSEDVKMVLWHPTMDVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVWSI 195
Query: 62 AWAHPKFGSILASCSYDGQVIIWK------EGNQN--DWTQAHTFND-HKSSVNSIAWAP 112
++ G + +CS D V IWK + + WT T + H ++ S+ W+
Sbjct: 196 SFNAA--GDKMVTCSDDLAVKIWKTDISRMQSGEGYVPWTHVCTLSGFHDRTIYSVHWSR 253
Query: 113 HELGLSLACGSSDGNISVFTATADGGWD------TTRIDQAHPVGVTSVSWAPAMAPGAL 166
G+ +A G+ D I +F + D + ++AH + V SV WAP
Sbjct: 254 D--GV-IASGAGDDTIQLFVDSDSDSVDGPSYKLLVKKEKAHEMDVNSVQWAPDKES--- 307
Query: 167 VGLGLLDPVQKLASCGCDNTVKVWKM 192
+ LAS D VK+WK+
Sbjct: 308 ---------RLLASASDDKMVKIWKL 324
>UNIPROTKB|F1MRW5 [details] [associations]
symbol:CDC20 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090129 "positive regulation of synapse maturation"
evidence=IEA] [GO:0051488 "activation of anaphase-promoting complex
activity" evidence=IEA] [GO:0040020 "regulation of meiosis"
evidence=IEA] [GO:0031915 "positive regulation of synaptic
plasticity" evidence=IEA] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0005680
"anaphase-promoting complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005680 GO:GO:0031145
GO:GO:0090129 GO:GO:0031915 GO:GO:0040020 GO:GO:0051488 OMA:RTPGKSN
GeneTree:ENSGT00580000081599 EMBL:DAAA02009047 IPI:IPI00715664
UniGene:Bt.639 ProteinModelPortal:F1MRW5 Ensembl:ENSBTAT00000012945
Uniprot:F1MRW5
Length = 499
Score = 146 (56.5 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 39/118 (33%), Positives = 58/118 (49%)
Query: 44 ASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEG-NQNDWTQAHTFNDHK 102
A H+ATL GH V + WA P G LAS D V +W + W TF H+
Sbjct: 298 AEHHVATLSGHSQEVCGLRWA-PD-GRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQ 355
Query: 103 SSVNSIAWAPHELG-LSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAP 159
+V ++AW P + L+ G+SD +I ++ + G + +D AH V S+ W+P
Sbjct: 356 GAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS--GACLSAVD-AHSQ-VCSILWSP 409
Score = 60 (26.2 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 185 NTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC 242
N + +WK Y + K+ L+ H+ V S+ +P+ G +T+ASA+ D T+ +W C
Sbjct: 423 NQLVIWK-YPTMAKV---AELKGHTARVLSLTMSPD-G---ATVASAAADETLRLWRC 472
Score = 39 (18.8 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 5/16 (31%), Positives = 11/16 (68%)
Query: 178 LASCGCDNTVKVWKMY 193
+AS D T+++W+ +
Sbjct: 458 VASAAADETLRLWRCF 473
>UNIPROTKB|Q5H7C0 [details] [associations]
symbol:CDC20 "Cell division cycle protein 20 homolog"
species:9823 "Sus scrofa" [GO:0031915 "positive regulation of
synaptic plasticity" evidence=ISS] [GO:0090129 "positive regulation
of synapse maturation" evidence=ISS] [GO:0051488 "activation of
anaphase-promoting complex activity" evidence=ISS] [GO:0005680
"anaphase-promoting complex" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005815 "microtubule organizing
center" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
[GO:0040020 "regulation of meiosis" evidence=IEA] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0008022 "protein
C-terminus binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016567 GO:GO:0005815
GO:GO:0005680 GO:GO:0000922 GO:GO:0031145 GO:GO:0090129
GO:GO:0031915 GO:GO:0040020 GO:GO:0051488 KO:K03363 CTD:991
HOGENOM:HOG000195514 HOVERGEN:HBG001024 OMA:RTPGKSN
OrthoDB:EOG4CC414 GeneTree:ENSGT00580000081599 EMBL:AB192873
RefSeq:NP_001116566.1 UniGene:Ssc.17001 ProteinModelPortal:Q5H7C0
STRING:Q5H7C0 Ensembl:ENSSSCT00000004368 GeneID:397379
KEGG:ssc:397379 Uniprot:Q5H7C0
Length = 499
Score = 146 (56.5 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 39/118 (33%), Positives = 58/118 (49%)
Query: 44 ASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEG-NQNDWTQAHTFNDHK 102
A H+ATL GH V + WA P G LAS D V +W + W TF H+
Sbjct: 298 AEHHVATLSGHSQEVCGLRWA-PD-GRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQ 355
Query: 103 SSVNSIAWAPHELG-LSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAP 159
+V ++AW P + L+ G+SD +I ++ + G + +D AH V S+ W+P
Sbjct: 356 GAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS--GACLSAVD-AHSQ-VCSILWSP 409
Score = 60 (26.2 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 185 NTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC 242
N + +WK Y + K+ L+ H+ V S+ +P+ G +T+ASA+ D T+ +W C
Sbjct: 423 NQLVIWK-YPTMAKV---AELKGHTARVLSLTMSPD-G---ATVASAAADETLRLWRC 472
Score = 39 (18.8 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 5/16 (31%), Positives = 11/16 (68%)
Query: 178 LASCGCDNTVKVWKMY 193
+AS D T+++W+ +
Sbjct: 458 VASAAADETLRLWRCF 473
>TAIR|locus:2172432 [details] [associations]
symbol:AT5G43920 "AT5G43920" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006703
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 EMBL:EF601122 EMBL:AK227235 IPI:IPI00548878
RefSeq:NP_199205.1 UniGene:At.26347 ProteinModelPortal:Q9FND4
SMR:Q9FND4 STRING:Q9FND4 PRIDE:Q9FND4 ProMEX:Q9FND4
EnsemblPlants:AT5G43920.1 GeneID:834414 KEGG:ath:AT5G43920
TAIR:At5g43920 InParanoid:Q9FND4 OMA:SSCAWFP PhylomeDB:Q9FND4
ProtClustDB:CLSN2686863 Genevestigator:Q9FND4 Uniprot:Q9FND4
Length = 523
Score = 135 (52.6 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 49/163 (30%), Positives = 79/163 (48%)
Query: 1 MPAQKIE--TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLA-TLKGHRGP 57
+P++ ++ H++ V V GK LATASSD + I + + L TL+ H+ P
Sbjct: 212 IPSETVQILVAHKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNP 271
Query: 58 VWQVAWAHPKFGSILASCSYDGQVI-IWKEGNQNDWTQAHTFNDHKS--SVNSIAWAPHE 114
V V+W+ P +L +C + +V+ +W + + HTF ++ + +V+S AW P
Sbjct: 272 VSFVSWS-PDDTKLL-TCG-NAEVLKLW---DVDTGVLRHTFGNNNTGFTVSSCAWFPDS 325
Query: 115 LGLSLACGSSDGNISVFTATADGG----WDTTRIDQAHPVGVT 153
L CGSSD + DG W TRI + + VT
Sbjct: 326 T--RLVCGSSDPERGIVMWDTDGNEIKAWRGTRIPKVVDLAVT 366
Score = 128 (50.1 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 42/154 (27%), Positives = 70/154 (45%)
Query: 39 GLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTF 98
G S+ + L H+ VW V +++ G LA+ S D IIWK + N HT
Sbjct: 208 GRDQIPSETVQILVAHKNEVWFVQFSNS--GKYLATASSDCTAIIWKVLDDNKVELKHTL 265
Query: 99 NDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWA 158
H++ V+ ++W+P + L L CG+++ + ++ G T + V+S +W
Sbjct: 266 ESHQNPVSFVSWSPDDTKL-LTCGNAEV-LKLWDVDT-GVLRHTFGNNNTGFTVSSCAWF 322
Query: 159 PAMAPGALVGLGLLDPVQKLASCGCD-NTVKVWK 191
P LV G DP + + D N +K W+
Sbjct: 323 PDST--RLV-CGSSDPERGIVMWDTDGNEIKAWR 353
Score = 72 (30.4 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 31/109 (28%), Positives = 45/109 (41%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
+ + C + +W + G WK + S +V + GL S IAS S+D V
Sbjct: 413 IVNLSCQE-IHLWDLA-GEWKQPLKFSGHRQSKYVIRSCFG---GLDSSFIASGSEDSQV 467
Query: 238 VIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTG-NLLAVA-DANNVTLW 284
IW K + E VL V VSW+ +LA A D + +W
Sbjct: 468 YIWNL-KNTKPLE--VLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
>MGI|MGI:2441730 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1X-linked receptor 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IC]
[GO:0005876 "spindle microtubule" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:2441730 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0005654 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024 KO:K04508
CTD:79718 HOGENOM:HOG000220902 HOVERGEN:HBG050240 OMA:LANNHAD
OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 EMBL:AF268195 EMBL:AK029595
EMBL:AK033347 EMBL:AK036064 EMBL:AK136255 EMBL:BC018512
IPI:IPI00308283 RefSeq:NP_109657.2 UniGene:Mm.202966
UniGene:Mm.446265 ProteinModelPortal:Q8BHJ5 SMR:Q8BHJ5
IntAct:Q8BHJ5 STRING:Q8BHJ5 PhosphoSite:Q8BHJ5 PaxDb:Q8BHJ5
PRIDE:Q8BHJ5 DNASU:81004 Ensembl:ENSMUST00000063988 GeneID:81004
KEGG:mmu:81004 InParanoid:Q8BHJ5 NextBio:350342 Bgee:Q8BHJ5
CleanEx:MM_TBL1XR1 Genevestigator:Q8BHJ5
GermOnline:ENSMUSG00000027630 Uniprot:Q8BHJ5
Length = 514
Score = 145 (56.1 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 50/167 (29%), Positives = 73/167 (43%)
Query: 54 HRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPH 113
H P V W + + ASCS D + + K G TF H + VN+I W P
Sbjct: 307 HSAPALDVDW---QSNNTFASCSTDMCIHVCKLGQDRP---IKTFQGHTNEVNAIKWDP- 359
Query: 114 ELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLD 173
G LA S D + +++ D + QAH + ++ W+P PG L
Sbjct: 360 -TGNLLASCSDDMTLKIWSMKQD---NCVHDLQAHNKEIYTIKWSPT-GPGTNNPNANL- 413
Query: 174 PVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPN 220
LAS D+TV++W + GI C L H + V SVA++P+
Sbjct: 414 ---MLASASFDSTVRLWDVDRGI----CIHTLTKHQEPVYSVAFSPD 453
Score = 123 (48.4 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 36/130 (27%), Positives = 61/130 (46%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWA---- 64
GH + V+ + D G LA+ S D ++KI + H L+ H ++ + W+
Sbjct: 347 GHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVH--DLQAHNKEIYTIKWSPTGP 404
Query: 65 ---HPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLAC 121
+P +LAS S+D V +W + + HT H+ V S+A++P G LA
Sbjct: 405 GTNNPNANLMLASASFDSTVRLW---DVDRGICIHTLTKHQEPVYSVAFSPD--GRYLAS 459
Query: 122 GSSDGNISVF 131
GS D + ++
Sbjct: 460 GSFDKCVHIW 469
Score = 114 (45.2 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 40/120 (33%), Positives = 57/120 (47%)
Query: 173 DPVQKL-ASCGCDNTVKVWKMYNGIWKMD-CFPALQMHSDWVRSVAWAPN---LGLPKST 227
DP L ASC D T+K+W M K D C LQ H+ + ++ W+P P +
Sbjct: 358 DPTGNLLASCSDDMTLKIWSM-----KQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNAN 412
Query: 228 I--ASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLW 284
+ ASAS D TV +W + G L + PV+SV++S G LA + V +W
Sbjct: 413 LMLASASFDSTVRLWDVDR-GICIH--TLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIW 469
Score = 95 (38.5 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 40/125 (32%), Positives = 56/125 (44%)
Query: 1 MPAQK--IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLS-NSAS-------QHLAT 50
+P+ K + GHE V A + LA+ S DS+ +I LS NS S +H
Sbjct: 157 IPSNKAVVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIR 216
Query: 51 LKGHRGP----VWQVAWAHPKFGSILASCSYDGQVIIW-KEGNQNDWTQAHTFNDHKSSV 105
G P V + W G++LA+ SYDG IW K+GN A T HK +
Sbjct: 217 EGGQDVPSNKDVTSLDWNSE--GTLLATGSYDGFARIWTKDGNL-----ASTLGQHKGPI 269
Query: 106 NSIAW 110
++ W
Sbjct: 270 FALKW 274
Score = 95 (38.5 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 34/113 (30%), Positives = 47/113 (41%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
+ S G D T +W + G K FP HS V W N +T AS S D +
Sbjct: 281 ILSAGVDKTTIIWDAHTGEAKQQ-FP---FHSAPALDVDWQSN-----NTFASCSTD--M 329
Query: 238 VIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLA-VADANNVTLWKEAVD 289
I C K G+ + + V ++ W TGNLLA +D + +W D
Sbjct: 330 CIHVC-KLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQD 381
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 164 (62.8 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 72/271 (26%), Positives = 118/271 (43%)
Query: 23 GKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVI 82
GK LAT + D I++ ++ +H+ GH ++ + +A G +AS S D V
Sbjct: 328 GKYLATGAEDKQIRVWDIATRTIKHI--FSGHEQDIYSLDFAGN--GRYIASGSGDKTVR 383
Query: 83 IWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTT 142
+W + +T + + V ++A +P GL +A GS D + V+ T G+
Sbjct: 384 LWDIA---EGKLVYTLSI-EDGVTTVAMSPD--GLYVAAGSLDKTVRVWDTTT--GYLVE 435
Query: 143 RIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKM------YNGI 196
R++ +P G ++ A AP ++L S D T+K+W++ YN
Sbjct: 436 RLE--NPDGHKDSVYSVAFAPNG----------KELVSGSLDKTIKLWELNLPRQQYNSA 483
Query: 197 WKMD-CFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLK 255
K C + H D+V SV P+ G + S S+D V W Q +L+
Sbjct: 484 GKGGKCHRTFEGHKDFVLSVCLTPD-G---HWVMSGSKDRGVQFWDPITGNAQM---MLQ 536
Query: 256 DFKTPVWSVSWSLTGNLLAVADAN-NVTLWK 285
K V SV+ S TGNL A + +W+
Sbjct: 537 GHKNSVISVAPSPTGNLFATGSGDMRARIWR 567
>MGI|MGI:1859866 [details] [associations]
symbol:Cdc20 "cell division cycle 20" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0008022 "protein
C-terminus binding" evidence=ISO] [GO:0008284 "positive regulation
of cell proliferation" evidence=ISO] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031915 "positive regulation of synaptic plasticity"
evidence=IDA] [GO:0040020 "regulation of meiosis" evidence=IGI]
[GO:0043234 "protein complex" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050773
"regulation of dendrite development" evidence=ISO] [GO:0051301
"cell division" evidence=IEA] [GO:0051488 "activation of
anaphase-promoting complex activity" evidence=ISO] [GO:0090129
"positive regulation of synapse maturation" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 MGI:MGI:1859866 GO:GO:0005813 GO:GO:0048471
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319
GO:GO:0016567 GO:GO:0005680 GO:GO:0050773 GO:GO:0000922
GO:GO:0031145 GO:GO:0090129 GO:GO:0031915 GO:GO:0040020
GO:GO:0051488 KO:K03363 CTD:991 HOGENOM:HOG000195514
HOVERGEN:HBG001024 OMA:RTPGKSN OrthoDB:EOG4CC414 EMBL:AB045313
EMBL:AF312208 EMBL:AK075998 EMBL:AK076030 EMBL:AK083459
EMBL:AK168650 EMBL:BC003215 IPI:IPI00320406 RefSeq:NP_075712.2
UniGene:Mm.289747 ProteinModelPortal:Q9JJ66 SMR:Q9JJ66
IntAct:Q9JJ66 MINT:MINT-2834618 STRING:Q9JJ66 PhosphoSite:Q9JJ66
PRIDE:Q9JJ66 DNASU:107995 Ensembl:ENSMUST00000006565 GeneID:107995
KEGG:mmu:107995 GeneTree:ENSGT00580000081599 InParanoid:Q9JJ66
NextBio:359849 Bgee:Q9JJ66 CleanEx:MM_CDC20 Genevestigator:Q9JJ66
GermOnline:ENSMUSG00000006398 Uniprot:Q9JJ66
Length = 499
Score = 148 (57.2 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 39/118 (33%), Positives = 59/118 (50%)
Query: 44 ASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEG-NQNDWTQAHTFNDHK 102
A H+ATL GH V + WA P G LAS D V +W G ++ W TF H+
Sbjct: 298 AEHHVATLSGHSQEVCGLRWA-PD-GRHLASGGNDNIVNVWPSGPGESGWAPLQTFTQHQ 355
Query: 103 SSVNSIAWAPHELG-LSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAP 159
+V ++AW P + L+ G+SD +I ++ + G + +D H V S+ W+P
Sbjct: 356 GAVKAVAWCPWQSNILATGGGTSDRHIRIWNVCS--GACLSAVD-VHSQ-VCSILWSP 409
Score = 56 (24.8 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 185 NTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC 242
N + +WK Y + K+ L+ H+ V + +P+ G +T+ASA+ D T+ +W C
Sbjct: 423 NQLVIWK-YPTMAKV---AELKGHTARVLGLTMSPD-G---ATVASAAADETLRLWRC 472
Score = 44 (20.5 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 12/41 (29%), Positives = 23/41 (56%)
Query: 166 LVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQ 206
++GL + +AS D T+++W+ + +MD PAL+
Sbjct: 446 VLGLTMSPDGATVASAAADETLRLWRCF----EMD--PALR 480
>UNIPROTKB|Q12788 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0005057
"receptor signaling protein activity" evidence=TAS] [GO:0007199
"G-protein coupled receptor signaling pathway coupled to cGMP
nucleotide second messenger" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471112 GO:GO:0005057
GO:GO:0007199 EMBL:AC005606 GO:GO:0006364 GO:GO:0032040
EMBL:AC005363 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR EMBL:U02609 EMBL:AB209173 EMBL:BC010231
EMBL:BC014007 EMBL:BC035409 IPI:IPI00477971 PIR:A49367
RefSeq:NP_006444.2 UniGene:Hs.513267 ProteinModelPortal:Q12788
SMR:Q12788 IntAct:Q12788 MINT:MINT-1427903 STRING:Q12788
PhosphoSite:Q12788 DMDM:223634675 SWISS-2DPAGE:Q12788 PaxDb:Q12788
PRIDE:Q12788 Ensembl:ENST00000568546 GeneID:10607 KEGG:hsa:10607
UCSC:uc002cnu.1 GeneCards:GC16P002022 HGNC:HGNC:11587 HPA:HPA042562
MIM:605915 neXtProt:NX_Q12788 PharmGKB:PA36351 OMA:HHFRGSP
PhylomeDB:Q12788 GenomeRNAi:10607 NextBio:40288 ArrayExpress:Q12788
Bgee:Q12788 CleanEx:HS_TBL3 Genevestigator:Q12788
GermOnline:ENSG00000183751 Uniprot:Q12788
Length = 808
Score = 135 (52.6 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 40/132 (30%), Positives = 63/132 (47%)
Query: 1 MPAQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQ 60
+ AQ + H+ ++ VA+ K LAT S D + K+ L Q L GHR +W
Sbjct: 469 LQAQTTQRCHDKDINSVAIAPNDKLLATGSQDRTAKLWALPQC--QLLGVFSGHRRGLWC 526
Query: 61 VAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLA 120
V ++ P +LA+ S DG + +W D++ TF H +SV +A+ G L
Sbjct: 527 VQFS-P-MDQVLATASADGTIKLWA---LQDFSCLKTFEGHDASVLKVAFVSR--GTQLL 579
Query: 121 CGSSDGNISVFT 132
SDG + ++T
Sbjct: 580 SSGSDGLVKLWT 591
Score = 103 (41.3 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 34/117 (29%), Positives = 51/117 (43%)
Query: 176 QKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDG 235
Q LA+ D T+K+W + + C + H V VA+ G + + S+ DG
Sbjct: 534 QVLATASADGTIKLWALQD----FSCLKTFEGHDASVLKVAFVSR-G---TQLLSSGSDG 585
Query: 236 TVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWS-LTGNLLAVADANNVTLWKEAVDGE 291
V +WT K E R L + VW + S L + L A + V LWK+ + E
Sbjct: 586 LVKLWTI-KNNECV--RTLDAHEDKVWGLHCSRLDDHALTGASDSRVILWKDVTEAE 639
Score = 83 (34.3 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 44/188 (23%), Positives = 72/188 (38%)
Query: 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFG 69
H V +A D LAT D ++++ + H +G G V VA+ HP
Sbjct: 108 HTAPVATMAFDPTSTLLATGGCDGAVRVWDIVRHYGTH--HFRGSPGVVHLVAF-HPDPT 164
Query: 70 SILA-SCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
+L S + D + +W + D + H S+V S+A++ G ++ D I
Sbjct: 165 RLLLFSSATDAAIRVW---SLQDRSCLAVLTAHYSAVTSLAFSAD--GHTMLSSGRD-KI 218
Query: 129 SVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVG-LGLLDPVQKLASCGCDNTV 187
+ WD V V A + P V LG+ P + G T+
Sbjct: 219 CII-------WDLQSCQATRTVPVFESVEAAVLLPEEPVSQLGVKSPGLYFLTAGDQGTL 271
Query: 188 KVWKMYNG 195
+VW+ +G
Sbjct: 272 RVWEAASG 279
Score = 76 (31.8 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 24/75 (32%), Positives = 32/75 (42%)
Query: 177 KLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLG-LPKSTIASASQDG 235
+L S G D VK+W + N +C L H D V W + L + AS D
Sbjct: 577 QLLSSGSDGLVKLWTIKNN----ECVRTLDAHEDKV----WGLHCSRLDDHALTGAS-DS 627
Query: 236 TVVIWTCAKEGEQWE 250
V++W E EQ E
Sbjct: 628 RVILWKDVTEAEQAE 642
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 117 (46.2 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 39/125 (31%), Positives = 56/125 (44%)
Query: 8 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPK 67
+GHE V+ G LA++ D I + + + ATLKGH G V ++ +
Sbjct: 53 SGHEGEVYCCKFHPNGATLASSGYDRLILMWNVYGDCENY-ATLKGHSGAVMELHYNTD- 110
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLAC-GSSDG 126
GS+L S S D V +W + + H S VNS P G LAC GS DG
Sbjct: 111 -GSLLFSASTDKTVCVW---DSETGERVKRLKGHTSFVNSCF--PARRGPQLACTGSDDG 164
Query: 127 NISVF 131
+ ++
Sbjct: 165 TVKLW 169
Score = 85 (35.0 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 33/119 (27%), Positives = 55/119 (46%)
Query: 173 DPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASAS 232
D ++ S G DN +KVW + K+ ++Q H D V ++ L S + S S
Sbjct: 193 DTSDQIISGGIDNDIKVWDLRQN--KL--IYSMQGHGDSVTGLS----LSADGSYLLSNS 244
Query: 233 QDGTVVIWT----CAKEG--EQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLW 284
D +V +W KE + ++G V +F+ + SWS G+ +A A+ V +W
Sbjct: 245 MDNSVRVWDIRPFAPKERCVKIFQGNV-HNFEKNLLRCSWSADGSKIAAGSADRFVYIW 302
Score = 80 (33.2 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 28/108 (25%), Positives = 45/108 (41%)
Query: 26 LATASSDSSIKIIGLSNSASQH--LATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVII 83
L A+ + +G S+S + L GH G V+ + HP G+ LAS YD +++
Sbjct: 25 LVAAAQSQQLSAMGPPRSSSLQAPIMLLSGHEGEVYCCKF-HPN-GATLASSGYDRLILM 82
Query: 84 WKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVF 131
W D T H +V + + G L S+D + V+
Sbjct: 83 WNV--YGDCENYATLKGHSGAVMELHYNTD--GSLLFSASTDKTVCVW 126
Score = 56 (24.8 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 25/81 (30%), Positives = 38/81 (46%)
Query: 165 ALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQ--MHS---DWVRSVAWAP 219
++ GL L L S DN+V+VW + K C Q +H+ + +R +W+
Sbjct: 227 SVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRC-SWSA 285
Query: 220 NLGLPKSTIASASQDGTVVIW 240
+ G S IA+ S D V IW
Sbjct: 286 D-G---SKIAAGSADRFVYIW 302
>UNIPROTKB|F1NM37 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AADN02023671 EMBL:AADN02023670 IPI:IPI00583117
Ensembl:ENSGALT00000008918 Uniprot:F1NM37
Length = 812
Score = 136 (52.9 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 42/130 (32%), Positives = 64/130 (49%)
Query: 3 AQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVA 62
AQ E GH+ ++ VA+ K +AT S D K+ + + L GH+ +W V
Sbjct: 482 AQMTERGHDKDINSVAVSPNDKLIATGSQDRLAKLWSCPDCSL--LGVFTGHKRGIWCVQ 539
Query: 63 WAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACG 122
++ P ILA+ S DG + +W G Q D++ TF H +SV I + G L G
Sbjct: 540 FS-P-VDQILATSSADGTLKLW--GLQ-DFSCLKTFEGHDASVLKIIFVSR--GTQLLSG 592
Query: 123 SSDGNISVFT 132
SDG + ++T
Sbjct: 593 GSDGLLKLWT 602
Score = 92 (37.4 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 29/123 (23%), Positives = 56/123 (45%)
Query: 174 PV-QKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASAS 232
PV Q LA+ D T+K+W G+ C + H V + + G + + S
Sbjct: 542 PVDQILATSSADGTLKLW----GLQDFSCLKTFEGHDASVLKIIFVSR-G---TQLLSGG 593
Query: 233 QDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGE 291
DG + +WT K E + L + +W + + +++ A +++ +TLWK+ + E
Sbjct: 594 SDGLLKLWTI-KTNECV--KTLDGHEDKIWGLHTNKQDDMVVTASSDSSITLWKDVTEIE 650
Query: 292 WQQ 294
++
Sbjct: 651 QEE 653
Score = 82 (33.9 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 46/186 (24%), Positives = 69/186 (37%)
Query: 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFG 69
H V + D LAT DS+IKI + H LKG G V V + HP
Sbjct: 109 HIAPVATMVFDSTSTLLATGGCDSTIKIWDMIKQYCTH--NLKGSSGVVHLVEF-HPDIS 165
Query: 70 SI-LASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
+ L S S D ++ IW + N + H S+V S+A+ G +L D
Sbjct: 166 RLQLFSSSMDYKIRIW---DLNSSKCVAVLDGHFSAVTSLAFTAD--GNTLISSGRDKIC 220
Query: 129 SVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAP--GALVGLGLLDPVQKLASCGCDNT 186
V W+ + + + A + P G LG+ + G
Sbjct: 221 MV--------WNLKTRESIRTIPIYESVEAAVLLPEQGDFSQLGVKKQGLHFLTAGSKGV 272
Query: 187 VKVWKM 192
+KVW++
Sbjct: 273 LKVWEV 278
Score = 74 (31.1 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 19/80 (23%), Positives = 34/80 (42%)
Query: 177 KLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGT 236
+L S G D +K+W + +C L H D + W + + +AS D +
Sbjct: 588 QLLSGGSDGLLKLWTIKTN----ECVKTLDGHEDKI----WGLHTNKQDDMVVTASSDSS 639
Query: 237 VVIWTCAKEGEQWEGRVLKD 256
+ +W E EQ E + ++
Sbjct: 640 ITLWKDVTEIEQEEAQAKRE 659
>UNIPROTKB|F1MFJ6 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024
EMBL:DAAA02002018 EMBL:DAAA02002019 EMBL:DAAA02002020
EMBL:DAAA02002021 EMBL:DAAA02002022 EMBL:DAAA02002023
EMBL:DAAA02002024 IPI:IPI00732449 UniGene:Bt.25104
ProteinModelPortal:F1MFJ6 Ensembl:ENSBTAT00000029211 OMA:GYARIWM
NextBio:20899067 Uniprot:F1MFJ6
Length = 514
Score = 147 (56.8 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 56/211 (26%), Positives = 88/211 (41%)
Query: 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFG 69
H+ + + + G + +A D + I ++ L H P V W +
Sbjct: 265 HKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQLFPF--HSAPALDVDW---QSN 319
Query: 70 SILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNIS 129
+ ASCS D + + K G TF H + VN+I W P G LA S D +
Sbjct: 320 NTFASCSTDMCIHVCKLGQDRP---IKTFQGHTNEVNAIKWDP--TGNLLASCSDDMTLK 374
Query: 130 VFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKV 189
+++ D + QAH + ++ W+P PG L LAS D+TV++
Sbjct: 375 IWSMKQD---NCVHDLQAHNKEIYTIKWSPT-GPGTSNPNANL----MLASASFDSTVRL 426
Query: 190 WKMYNGIWKMDCFPALQMHSDWVRSVAWAPN 220
W + GI C L H + V SVA++P+
Sbjct: 427 WDVDRGI----CIHTLTKHQEPVYSVAFSPD 453
Score = 123 (48.4 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 36/130 (27%), Positives = 61/130 (46%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWA---- 64
GH + V+ + D G LA+ S D ++KI + H L+ H ++ + W+
Sbjct: 347 GHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVH--DLQAHNKEIYTIKWSPTGP 404
Query: 65 ---HPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLAC 121
+P +LAS S+D V +W + + HT H+ V S+A++P G LA
Sbjct: 405 GTSNPNANLMLASASFDSTVRLW---DVDRGICIHTLTKHQEPVYSVAFSPD--GRYLAS 459
Query: 122 GSSDGNISVF 131
GS D + ++
Sbjct: 460 GSFDKCVHIW 469
Score = 114 (45.2 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 40/120 (33%), Positives = 57/120 (47%)
Query: 173 DPVQKL-ASCGCDNTVKVWKMYNGIWKMD-CFPALQMHSDWVRSVAWAPN---LGLPKST 227
DP L ASC D T+K+W M K D C LQ H+ + ++ W+P P +
Sbjct: 358 DPTGNLLASCSDDMTLKIWSM-----KQDNCVHDLQAHNKEIYTIKWSPTGPGTSNPNAN 412
Query: 228 I--ASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLW 284
+ ASAS D TV +W + G L + PV+SV++S G LA + V +W
Sbjct: 413 LMLASASFDSTVRLWDVDR-GICIH--TLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIW 469
Score = 94 (38.1 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 34/113 (30%), Positives = 47/113 (41%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
+ S G D T +W + G K FP HS V W N +T AS S D +
Sbjct: 281 ILSAGVDKTTIIWDAHTGEAKQ-LFP---FHSAPALDVDWQSN-----NTFASCSTD--M 329
Query: 238 VIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLA-VADANNVTLWKEAVD 289
I C K G+ + + V ++ W TGNLLA +D + +W D
Sbjct: 330 CIHVC-KLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQD 381
Score = 93 (37.8 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 38/115 (33%), Positives = 51/115 (44%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLS-NSAS-------QHLATLKGHRGP--- 57
GHE V A + LA+ S DS+ +I LS NS S +H G P
Sbjct: 167 GHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNK 226
Query: 58 -VWQVAWAHPKFGSILASCSYDGQVIIW-KEGNQNDWTQAHTFNDHKSSVNSIAW 110
V + W G++LA+ SYDG IW K+GN A T HK + ++ W
Sbjct: 227 DVTSLDWNSE--GTLLATGSYDGFARIWTKDGNL-----ASTLGQHKGPIFALKW 274
>UNIPROTKB|Q9BZK7 [details] [associations]
symbol:TBL1XR1 "F-box-like/WD repeat-containing protein
TBL1XR1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=IGI;IDA] [GO:0042393 "histone binding"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=IDA] [GO:0000118
"histone deacetylase complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0007219
GO:GO:0044255 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393
GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AF314544 EMBL:AF268193
EMBL:AK022956 EMBL:BC060320 EMBL:BC113421 IPI:IPI00002922
RefSeq:NP_078941.2 UniGene:Hs.581171 ProteinModelPortal:Q9BZK7
SMR:Q9BZK7 IntAct:Q9BZK7 STRING:Q9BZK7 PhosphoSite:Q9BZK7
DMDM:23396874 PaxDb:Q9BZK7 PRIDE:Q9BZK7 Ensembl:ENST00000430069
Ensembl:ENST00000457928 GeneID:79718 KEGG:hsa:79718 UCSC:uc003fiw.4
CTD:79718 GeneCards:GC03M176737 H-InvDB:HIX0147994 HGNC:HGNC:29529
HPA:HPA019182 MIM:608628 neXtProt:NX_Q9BZK7 PharmGKB:PA134928556
HOGENOM:HOG000220902 HOVERGEN:HBG050240 InParanoid:Q9BZK7
OMA:LANNHAD OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 GenomeRNAi:79718
NextBio:69065 PMAP-CutDB:Q9BZK7 ArrayExpress:Q9BZK7 Bgee:Q9BZK7
CleanEx:HS_TBL1XR1 Genevestigator:Q9BZK7 GermOnline:ENSG00000177565
Uniprot:Q9BZK7
Length = 514
Score = 145 (56.1 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 50/167 (29%), Positives = 73/167 (43%)
Query: 54 HRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPH 113
H P V W + + ASCS D + + K G TF H + VN+I W P
Sbjct: 307 HSAPALDVDW---QSNNTFASCSTDMCIHVCKLGQDRP---IKTFQGHTNEVNAIKWDP- 359
Query: 114 ELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLD 173
G LA S D + +++ D + QAH + ++ W+P PG L
Sbjct: 360 -TGNLLASCSDDMTLKIWSMKQD---NCVHDLQAHNKEIYTIKWSPT-GPGTNNPNANL- 413
Query: 174 PVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPN 220
LAS D+TV++W + GI C L H + V SVA++P+
Sbjct: 414 ---MLASASFDSTVRLWDVDRGI----CIHTLTKHQEPVYSVAFSPD 453
Score = 123 (48.4 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 36/130 (27%), Positives = 61/130 (46%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWA---- 64
GH + V+ + D G LA+ S D ++KI + H L+ H ++ + W+
Sbjct: 347 GHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVH--DLQAHNKEIYTIKWSPTGP 404
Query: 65 ---HPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLAC 121
+P +LAS S+D V +W + + HT H+ V S+A++P G LA
Sbjct: 405 GTNNPNANLMLASASFDSTVRLW---DVDRGICIHTLTKHQEPVYSVAFSPD--GRYLAS 459
Query: 122 GSSDGNISVF 131
GS D + ++
Sbjct: 460 GSFDKCVHIW 469
Score = 114 (45.2 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 40/120 (33%), Positives = 57/120 (47%)
Query: 173 DPVQKL-ASCGCDNTVKVWKMYNGIWKMD-CFPALQMHSDWVRSVAWAPN---LGLPKST 227
DP L ASC D T+K+W M K D C LQ H+ + ++ W+P P +
Sbjct: 358 DPTGNLLASCSDDMTLKIWSM-----KQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNAN 412
Query: 228 I--ASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLW 284
+ ASAS D TV +W + G L + PV+SV++S G LA + V +W
Sbjct: 413 LMLASASFDSTVRLWDVDR-GICIH--TLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIW 469
Score = 95 (38.5 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 34/113 (30%), Positives = 47/113 (41%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
+ S G D T +W + G K FP HS V W N +T AS S D +
Sbjct: 281 ILSAGVDKTTIIWDAHTGEAKQQ-FP---FHSAPALDVDWQSN-----NTFASCSTD--M 329
Query: 238 VIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLA-VADANNVTLWKEAVD 289
I C K G+ + + V ++ W TGNLLA +D + +W D
Sbjct: 330 CIHVC-KLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQD 381
Score = 93 (37.8 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 38/115 (33%), Positives = 51/115 (44%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLS-NSAS-------QHLATLKGHRGP--- 57
GHE V A + LA+ S DS+ +I LS NS S +H G P
Sbjct: 167 GHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNK 226
Query: 58 -VWQVAWAHPKFGSILASCSYDGQVIIW-KEGNQNDWTQAHTFNDHKSSVNSIAW 110
V + W G++LA+ SYDG IW K+GN A T HK + ++ W
Sbjct: 227 DVTSLDWNSE--GTLLATGSYDGFARIWTKDGNL-----ASTLGQHKGPIFALKW 274
>UNIPROTKB|F1SGD0 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 OMA:GYARIWM
EMBL:CU856317 Ensembl:ENSSSCT00000012871 Uniprot:F1SGD0
Length = 514
Score = 145 (56.1 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 50/167 (29%), Positives = 73/167 (43%)
Query: 54 HRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPH 113
H P V W + + ASCS D + + K G TF H + VN+I W P
Sbjct: 307 HSAPALDVDW---QSNNTFASCSTDMCIHVCKLGQDRP---IKTFQGHTNEVNAIKWDP- 359
Query: 114 ELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLD 173
G LA S D + +++ D + QAH + ++ W+P PG L
Sbjct: 360 -TGNLLASCSDDMTLKIWSMKQD---NCVHDLQAHNKEIYTIKWSPT-GPGTNNPNANL- 413
Query: 174 PVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPN 220
LAS D+TV++W + GI C L H + V SVA++P+
Sbjct: 414 ---MLASASFDSTVRLWDVDRGI----CIHTLTKHQEPVYSVAFSPD 453
Score = 123 (48.4 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 36/130 (27%), Positives = 61/130 (46%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWA---- 64
GH + V+ + D G LA+ S D ++KI + H L+ H ++ + W+
Sbjct: 347 GHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVH--DLQAHNKEIYTIKWSPTGP 404
Query: 65 ---HPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLAC 121
+P +LAS S+D V +W + + HT H+ V S+A++P G LA
Sbjct: 405 GTNNPNANLMLASASFDSTVRLW---DVDRGICIHTLTKHQEPVYSVAFSPD--GRYLAS 459
Query: 122 GSSDGNISVF 131
GS D + ++
Sbjct: 460 GSFDKCVHIW 469
Score = 114 (45.2 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 40/120 (33%), Positives = 57/120 (47%)
Query: 173 DPVQKL-ASCGCDNTVKVWKMYNGIWKMD-CFPALQMHSDWVRSVAWAPN---LGLPKST 227
DP L ASC D T+K+W M K D C LQ H+ + ++ W+P P +
Sbjct: 358 DPTGNLLASCSDDMTLKIWSM-----KQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNAN 412
Query: 228 I--ASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLW 284
+ ASAS D TV +W + G L + PV+SV++S G LA + V +W
Sbjct: 413 LMLASASFDSTVRLWDVDR-GICIH--TLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIW 469
Score = 95 (38.5 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 34/113 (30%), Positives = 47/113 (41%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
+ S G D T +W + G K FP HS V W N +T AS S D +
Sbjct: 281 ILSAGVDKTTIIWDAHTGEAKQQ-FP---FHSAPALDVDWQSN-----NTFASCSTD--M 329
Query: 238 VIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLA-VADANNVTLWKEAVD 289
I C K G+ + + V ++ W TGNLLA +D + +W D
Sbjct: 330 CIHVC-KLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQD 381
Score = 93 (37.8 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 38/115 (33%), Positives = 51/115 (44%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLS-NSAS-------QHLATLKGHRGP--- 57
GHE V A + LA+ S DS+ +I LS NS S +H G P
Sbjct: 167 GHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNK 226
Query: 58 -VWQVAWAHPKFGSILASCSYDGQVIIW-KEGNQNDWTQAHTFNDHKSSVNSIAW 110
V + W G++LA+ SYDG IW K+GN A T HK + ++ W
Sbjct: 227 DVTSLDWNSE--GTLLATGSYDGFARIWTKDGNL-----ASTLGQHKGPIFALKW 274
>RGD|1560053 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1 X-linked receptor 1"
species:10116 "Rattus norvegicus" [GO:0000118 "histone deacetylase
complex" evidence=IEA;ISO] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005876
"spindle microtubule" evidence=IEA;ISO] [GO:0008013 "beta-catenin
binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0017053 "transcriptional repressor complex"
evidence=IEA;ISO] [GO:0042393 "histone binding" evidence=IEA;ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 RGD:1560053 GO:GO:0017053 GO:GO:0003714
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513
GO:GO:0060070 GO:GO:0005876 EMBL:CH473961 GO:GO:0000118
GeneTree:ENSGT00690000102024 KO:K04508 CTD:79718 OrthoDB:EOG412M5M
IPI:IPI00367976 RefSeq:NP_001102411.1 UniGene:Rn.140831
Ensembl:ENSRNOT00000015573 GeneID:365755 KEGG:rno:365755
UCSC:RGD:1560053 NextBio:687981 Uniprot:D3ZNF4
Length = 514
Score = 145 (56.1 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 50/167 (29%), Positives = 73/167 (43%)
Query: 54 HRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPH 113
H P V W + + ASCS D + + K G TF H + VN+I W P
Sbjct: 307 HSAPALDVDW---QSNNTFASCSTDMCIHVCKLGQDRP---IKTFQGHTNEVNAIKWDP- 359
Query: 114 ELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLD 173
G LA S D + +++ D + QAH + ++ W+P PG L
Sbjct: 360 -TGNLLASCSDDMTLKIWSMKQD---NCVHDLQAHNKEIYTIKWSPT-GPGTNNPNANL- 413
Query: 174 PVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPN 220
LAS D+TV++W + GI C L H + V SVA++P+
Sbjct: 414 ---MLASASFDSTVRLWDVDRGI----CIHTLTKHQEPVYSVAFSPD 453
Score = 123 (48.4 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 36/130 (27%), Positives = 61/130 (46%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWA---- 64
GH + V+ + D G LA+ S D ++KI + H L+ H ++ + W+
Sbjct: 347 GHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVH--DLQAHNKEIYTIKWSPTGP 404
Query: 65 ---HPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLAC 121
+P +LAS S+D V +W + + HT H+ V S+A++P G LA
Sbjct: 405 GTNNPNANLMLASASFDSTVRLW---DVDRGICIHTLTKHQEPVYSVAFSPD--GRYLAS 459
Query: 122 GSSDGNISVF 131
GS D + ++
Sbjct: 460 GSFDKCVHIW 469
Score = 114 (45.2 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 40/120 (33%), Positives = 57/120 (47%)
Query: 173 DPVQKL-ASCGCDNTVKVWKMYNGIWKMD-CFPALQMHSDWVRSVAWAPN---LGLPKST 227
DP L ASC D T+K+W M K D C LQ H+ + ++ W+P P +
Sbjct: 358 DPTGNLLASCSDDMTLKIWSM-----KQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNAN 412
Query: 228 I--ASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLW 284
+ ASAS D TV +W + G L + PV+SV++S G LA + V +W
Sbjct: 413 LMLASASFDSTVRLWDVDR-GICIH--TLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIW 469
Score = 95 (38.5 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 34/113 (30%), Positives = 47/113 (41%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
+ S G D T +W + G K FP HS V W N +T AS S D +
Sbjct: 281 ILSAGVDKTTIIWDAHTGEAKQQ-FP---FHSAPALDVDWQSN-----NTFASCSTD--M 329
Query: 238 VIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLA-VADANNVTLWKEAVD 289
I C K G+ + + V ++ W TGNLLA +D + +W D
Sbjct: 330 CIHVC-KLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQD 381
Score = 93 (37.8 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 38/115 (33%), Positives = 51/115 (44%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLS-NSAS-------QHLATLKGHRGP--- 57
GHE V A + LA+ S DS+ +I LS NS S +H G P
Sbjct: 167 GHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVPSNK 226
Query: 58 -VWQVAWAHPKFGSILASCSYDGQVIIW-KEGNQNDWTQAHTFNDHKSSVNSIAW 110
V + W G++LA+ SYDG IW K+GN A T HK + ++ W
Sbjct: 227 DVTSLDWNSE--GTLLATGSYDGFARIWTKDGNL-----ASTLGQHKGPIFALKW 274
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 161 (61.7 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 53/150 (35%), Positives = 74/150 (49%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH D V V + LA+AS DS++KI + QH TL+GHR V V ++H
Sbjct: 377 GHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQH--TLEGHRDWVRSVIFSHDS- 433
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
+LAS S D V IW G + Q HT H+ V S+ ++ H+ L LA S D +
Sbjct: 434 -QLLASASDDSTVKIWDTGTGS--LQ-HTLEGHRDWVRSVIFS-HDSRL-LASASDDRTV 487
Query: 129 SVFTATADGGWDTTRIDQAHPVGVTSVSWA 158
++ T G T + H VTSVS++
Sbjct: 488 RIWD-TEKGSHKHTL--EGHSSLVTSVSFS 514
Score = 150 (57.9 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 44/127 (34%), Positives = 64/127 (50%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH D V V + LA+AS DS++KI + QH TL+GHR V V ++H
Sbjct: 419 GHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQH--TLEGHRDWVRSVIFSHDS- 475
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
+LAS S D V IW + + HT H S V S++++ H+ L LA S+D +
Sbjct: 476 -RLLASASDDRTVRIW---DTEKGSHKHTLEGHSSLVTSVSFS-HDSRL-LASASNDQTV 529
Query: 129 SVFTATA 135
++ A
Sbjct: 530 RIWDIEA 536
Score = 149 (57.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 50/147 (34%), Positives = 70/147 (47%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH D V V + RL ++SDS++KI + QH TL+GHR V V ++H
Sbjct: 336 GHSDLVRSVIFS-HDSRLLASASDSTVKIWDTGTGSLQH--TLEGHRDWVRSVIFSHDS- 391
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
+LAS S D V IW G + Q HT H+ V S+ ++ H+ L LA S D +
Sbjct: 392 -QLLASASDDSTVKIWDTGTGS--LQ-HTLEGHRDWVRSVIFS-HDSQL-LASASDDSTV 445
Query: 129 SVFTATADGGWDTTRIDQAHPVGVTSV 155
++ T G T + H V SV
Sbjct: 446 KIWD-TGTGSLQHTL--EGHRDWVRSV 469
Score = 124 (48.7 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 41/110 (37%), Positives = 55/110 (50%)
Query: 176 QKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDG 235
Q LAS D+TVK+W G + L+ H DWVRSV ++ + L +ASAS D
Sbjct: 434 QLLASASDDSTVKIWDTGTGSLQH----TLEGHRDWVRSVIFSHDSRL----LASASDDR 485
Query: 236 TVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLW 284
TV IW K + L+ + V SVS+S LLA A + V +W
Sbjct: 486 TVRIWDTEKGSHK---HTLEGHSSLVTSVSFSHDSRLLASASNDQTVRIW 532
Score = 120 (47.3 bits), Expect = 0.00024, P = 0.00024
Identities = 41/110 (37%), Positives = 53/110 (48%)
Query: 176 QKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDG 235
Q LAS D+TVK+W G + L+ H DWVRSV ++ + L +ASAS D
Sbjct: 392 QLLASASDDSTVKIWDTGTGSLQH----TLEGHRDWVRSVIFSHDSQL----LASASDDS 443
Query: 236 TVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVA-DANNVTLW 284
TV IW Q L+ + V SV +S LLA A D V +W
Sbjct: 444 TVKIWDTGTGSLQ---HTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIW 490
>UNIPROTKB|Q5ZI36 [details] [associations]
symbol:CDC20 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005680 "anaphase-promoting complex" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0019899
"enzyme binding" evidence=IEA] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031915 "positive regulation of synaptic
plasticity" evidence=IEA] [GO:0040020 "regulation of meiosis"
evidence=IEA] [GO:0051488 "activation of anaphase-promoting complex
activity" evidence=IEA] [GO:0090129 "positive regulation of synapse
maturation" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0005680 GO:GO:0031145
GO:GO:0031915 GO:GO:0040020 GO:GO:0051488 KO:K03363 CTD:991
HOGENOM:HOG000195514 HOVERGEN:HBG001024 OrthoDB:EOG4CC414
GeneTree:ENSGT00580000081599 OMA:AVALDNC EMBL:AADN02012741
EMBL:AADN02012739 EMBL:AJ720948 IPI:IPI00601740
RefSeq:NP_001006536.1 UniGene:Gga.9187 STRING:Q5ZI36
Ensembl:ENSGALT00000016208 GeneID:424563 KEGG:gga:424563
InParanoid:Q5ZI36 NextBio:20826883 Uniprot:Q5ZI36
Length = 507
Score = 144 (55.7 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 39/118 (33%), Positives = 60/118 (50%)
Query: 44 ASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWK--EGNQNDWTQAHTFNDH 101
A H+ATL GH V + W+ G LAS D V IW +G+ D+T TF H
Sbjct: 305 AEHHVATLTGHTQEVCGLKWSLD--GRYLASGGNDNLVNIWPSVQGDSGDFTPVQTFTQH 362
Query: 102 KSSVNSIAWAPHELG-LSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWA 158
+ +V ++AW P + L+ G+SD +I ++ + G + +D AH V S+ W+
Sbjct: 363 QGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS--GTCLSAVD-AHSQ-VCSILWS 416
Score = 57 (25.1 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 18/58 (31%), Positives = 33/58 (56%)
Query: 185 NTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC 242
N + +WK Y + K+ L+ H+ V ++ +P+ G+ T+ASA+ D T+ +W C
Sbjct: 431 NQLVIWK-YPTMAKVT---ELRGHTARVLNLTMSPD-GV---TVASAAADETLRLWRC 480
Score = 39 (18.8 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 5/16 (31%), Positives = 11/16 (68%)
Query: 178 LASCGCDNTVKVWKMY 193
+AS D T+++W+ +
Sbjct: 466 VASAAADETLRLWRCF 481
>UNIPROTKB|F1NYZ8 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0008013 "beta-catenin
binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 EMBL:AADN02020878
EMBL:AADN02020879 EMBL:AADN02020880 EMBL:AADN02020881
EMBL:AADN02020882 EMBL:AADN02020883 EMBL:AADN02020884
EMBL:AADN02020885 EMBL:AADN02020886 EMBL:AADN02020887
EMBL:AADN02020888 EMBL:AADN02020889 EMBL:AADN02020890
EMBL:AADN02020891 EMBL:AADN02020892 EMBL:AADN02020893
EMBL:AADN02020894 EMBL:AADN02020895 EMBL:AADN02020896
EMBL:AADN02020897 EMBL:AADN02020898 IPI:IPI00594570
Ensembl:ENSGALT00000001912 ArrayExpress:F1NYZ8 Uniprot:F1NYZ8
Length = 517
Score = 155 (59.6 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 57/188 (30%), Positives = 82/188 (43%)
Query: 54 HRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPH 113
H P V W + + ASCS D + + K G TF H + VN+I W P
Sbjct: 307 HSAPALDVDW---QSNNTFASCSTDMCIHVCKLGQDRP---IKTFQGHTNEVNAIKWDP- 359
Query: 114 ELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGAL-VGLGLL 172
G LA S D + +++ D QAH + ++ W+P PG L+
Sbjct: 360 -TGNLLASCSDDMTLKIWSMKQDS---CVHDLQAHNKEIYTIKWSPT-GPGTNNPNANLM 414
Query: 173 DPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASAS 232
+ L S D+TV++W + GI C L H + V SVA++P+ G +AS S
Sbjct: 415 --LASLDSASFDSTVRLWDVDRGI----CIHTLTKHQEPVYSVAFSPD-G---RYLASGS 464
Query: 233 QDGTVVIW 240
D V IW
Sbjct: 465 FDKCVHIW 472
Score = 112 (44.5 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 40/123 (32%), Positives = 58/123 (47%)
Query: 173 DPVQKL-ASCGCDNTVKVWKMYNGIWKMD-CFPALQMHSDWVRSVAWAP--------NLG 222
DP L ASC D T+K+W M K D C LQ H+ + ++ W+P N
Sbjct: 358 DPTGNLLASCSDDMTLKIWSM-----KQDSCVHDLQAHNKEIYTIKWSPTGPGTNNPNAN 412
Query: 223 LPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-V 281
L +++ SAS D TV +W + G L + PV+SV++S G LA + V
Sbjct: 413 LMLASLDSASFDSTVRLWDVDR-GICIH--TLTKHQEPVYSVAFSPDGRYLASGSFDKCV 469
Query: 282 TLW 284
+W
Sbjct: 470 HIW 472
Score = 95 (38.5 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 34/113 (30%), Positives = 47/113 (41%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
+ S G D T +W + G K FP HS V W N +T AS S D +
Sbjct: 281 ILSAGVDKTTIIWDAHTGEAKQQ-FP---FHSAPALDVDWQSN-----NTFASCSTD--M 329
Query: 238 VIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLA-VADANNVTLWKEAVD 289
I C K G+ + + V ++ W TGNLLA +D + +W D
Sbjct: 330 CIHVC-KLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQD 381
Score = 93 (37.8 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 38/115 (33%), Positives = 51/115 (44%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLS-NSAS-------QHLATLKGHRGP--- 57
GHE V A + LA+ S DS+ +I LS NS S +H G P
Sbjct: 167 GHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNK 226
Query: 58 -VWQVAWAHPKFGSILASCSYDGQVIIW-KEGNQNDWTQAHTFNDHKSSVNSIAW 110
V + W G++LA+ SYDG IW K+GN A T HK + ++ W
Sbjct: 227 DVTSLDWNSE--GTLLATGSYDGFARIWTKDGNL-----ASTLGQHKGPIFALKW 274
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 103 (41.3 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 38/116 (32%), Positives = 59/116 (50%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
+AS G D TVKVW + + K+ Q+HS V +++ P+ + + +AS DGT+
Sbjct: 201 IASAGSDQTVKVWDVR--VNKL--LQHYQVHSGGVNCISFHPS----DNYLVTASSDGTL 252
Query: 238 VIWTCAKEGEQWEGRV---LKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVD 289
I + EGR+ L+ PV++VS+S G L A A+ V LW+ D
Sbjct: 253 KIL------DLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTNFD 302
Score = 101 (40.6 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 35/124 (28%), Positives = 61/124 (49%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH+ + + + GK+LATAS D+ + + A + GH+ V V ++ P
Sbjct: 16 GHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYV--GHKDVVTSVQFS-PH- 71
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
G++LAS S D V +W + +++ F H + V S+ ++ G LA S D +I
Sbjct: 72 GNLLASASRDRTVRLWIPDKRGKFSE---FKAHTAPVRSVDFSAD--GQFLATASEDKSI 126
Query: 129 SVFT 132
V++
Sbjct: 127 KVWS 130
Score = 90 (36.7 bits), Expect = 9.9e-08, Sum P(2) = 9.9e-08
Identities = 32/126 (25%), Positives = 57/126 (45%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH+D V V +G LA+AS D ++++ + + + + K H PV V ++
Sbjct: 58 GHKDVVTSVQFSPHGNLLASASRDRTVRL-WIPDKRGK-FSEFKAHTAPVRSVDFSAD-- 113
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
G LA+ S D + +W Q ++ H V ++P + L ++C S D I
Sbjct: 114 GQFLATASEDKSIKVWSMYRQRF---LYSLYRHTHWVRCAKFSP-DGRLIVSC-SEDKTI 168
Query: 129 SVFTAT 134
++ T
Sbjct: 169 KIWDTT 174
Score = 64 (27.6 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 23/65 (35%), Positives = 30/65 (46%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGL-PKST-IASASQDG 235
+ SC D T+K+W N C + SD SV +A + P T IASA D
Sbjct: 159 IVSCSEDKTIKIWDTTN----KQC---VNNFSD---SVGFANFVDFNPSGTCIASAGSDQ 208
Query: 236 TVVIW 240
TV +W
Sbjct: 209 TVKVW 213
>FB|FBgn0263933 [details] [associations]
symbol:ebi "ebi" species:7227 "Drosophila melanogaster"
[GO:0042058 "regulation of epidermal growth factor receptor
signaling pathway" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005525 "GTP binding" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0051726 "regulation of cell
cycle" evidence=IMP] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0042676 "compound eye cone cell fate
commitment" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0017053 "transcriptional repressor complex"
evidence=IGI;IPI] [GO:0042461 "photoreceptor cell development"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0031065 "positive regulation of histone deacetylation"
evidence=IDA] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IPI] [GO:0035220 "wing disc
development" evidence=IGI;IMP] [GO:0045747 "positive regulation of
Notch signaling pathway" evidence=IGI;IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0045572 "positive regulation of
imaginal disc growth" evidence=IGI;IMP] [GO:0022416 "chaeta
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005525 GO:GO:0017053 GO:GO:0007173 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007601 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030162 GO:GO:0007219 GO:GO:0045747
GO:GO:0003682 GO:GO:0000122 GO:GO:0022416 GO:GO:0035220
GO:GO:0007049 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045572
GO:GO:0005700 GO:GO:0042461 GO:GO:0042058 GO:GO:0031065
GO:GO:0042676 EMBL:AF146345 EMBL:AY061326 RefSeq:NP_477329.1
UniGene:Dm.3639 ProteinModelPortal:Q95RJ9 SMR:Q95RJ9 IntAct:Q95RJ9
MINT:MINT-6540401 STRING:Q95RJ9 PaxDb:Q95RJ9
EnsemblMetazoa:FBtr0078055 GeneID:33212 KEGG:dme:Dmel_CG4063
CTD:33212 FlyBase:FBgn0263933 GeneTree:ENSGT00690000102024
InParanoid:Q95RJ9 KO:K04508 OMA:NRDRCCH OrthoDB:EOG4SF7NC
PhylomeDB:Q95RJ9 GenomeRNAi:33212 NextBio:782461 Bgee:Q95RJ9
GermOnline:CG4063 Uniprot:Q95RJ9
Length = 700
Score = 161 (61.7 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 62/220 (28%), Positives = 97/220 (44%)
Query: 54 HRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPH 113
H P V W + ASCS D ++ + + G N+ TF H + VN+I W P
Sbjct: 492 HSAPALDVDW---QTNQAFASCSTDQRIHVCRLG-VNE--PIKTFKGHTNEVNAIKWCPQ 545
Query: 114 ELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGAL-VGLGLL 172
G LA S D + +++ D QAH + ++ W+P PG L+
Sbjct: 546 --GQLLASCSDDMTLKIWSMNRDRCCHDL---QAHSKEIYTIKWSPT-GPGTNNPNTNLI 599
Query: 173 DPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASAS 232
LAS D+TV++W + G C L H++ V SVA++P+ G +AS S
Sbjct: 600 -----LASASFDSTVRLWDVERG----SCIHTLTKHTEPVYSVAFSPD-G---KHLASGS 646
Query: 233 QDGTVVIWTCAKEGEQWEGRVLKDFKTP--VWSVSWSLTG 270
D V IW+ G+++ +K ++ V W+ G
Sbjct: 647 FDKCVHIWSTQT------GQLVHSYKGTGGIFEVCWNSKG 680
Score = 120 (47.3 bits), Expect = 0.00032, P = 0.00032
Identities = 36/131 (27%), Positives = 62/131 (47%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWA---- 64
GH + V+ + G+ LA+ S D ++KI ++ H L+ H ++ + W+
Sbjct: 532 GHTNEVNAIKWCPQGQLLASCSDDMTLKIWSMNRDRCCH--DLQAHSKEIYTIKWSPTGP 589
Query: 65 ---HPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLAC 121
+P ILAS S+D V +W + + HT H V S+A++P G LA
Sbjct: 590 GTNNPNTNLILASASFDSTVRLW---DVERGSCIHTLTKHTEPVYSVAFSPD--GKHLAS 644
Query: 122 GSSDGNISVFT 132
GS D + +++
Sbjct: 645 GSFDKCVHIWS 655
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 121 (47.7 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 46/147 (31%), Positives = 68/147 (46%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH TV +AM G L T S D+++++ + + +HLATL GH V V +
Sbjct: 336 GHTSTVRCMAMA--GSILVTGSRDTTLRVWDVESG--RHLATLHGHHAAVRCVQFD---- 387
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLAC-GSSDGN 127
G+ + S YD V IW N + T H + V S+ + E S+ C GS D +
Sbjct: 388 GTTVVSGGYDFTVKIW---NAHTGRCIRTLTGHNNRVYSLLF---ESERSIVCSGSLDTS 441
Query: 128 ISVFTATADGGWDTTRIDQAHPVGVTS 154
I V+ T G + + Q H +TS
Sbjct: 442 IRVWDFTRPEGQECVALLQGH-TSLTS 467
Score = 117 (46.2 bits), Expect = 0.00054, P = 0.00054
Identities = 31/125 (24%), Positives = 60/125 (48%)
Query: 8 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQH-LATLKGHRGPVWQVAWAHP 66
TGH + V+ + + + + S D+SI++ + Q +A L+GH +
Sbjct: 415 TGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTS----LTSGMQ 470
Query: 67 KFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDG 126
G+IL SC+ D V +W + ++ T H + H+S++ S+ W + +A S DG
Sbjct: 471 LRGNILVSCNADSHVRVW---DIHEGTCVHMLSGHRSAITSLQWFGRNM---VATSSDDG 524
Query: 127 NISVF 131
+ ++
Sbjct: 525 TVKLW 529
Score = 110 (43.8 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 38/123 (30%), Positives = 55/123 (44%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GHED V M + L T S D+++K+ + + TL GH G VW + +
Sbjct: 253 GHEDHVI-TCMQIHDDVLVTGSDDNTLKVWCIDKGEVMY--TLVGHTGGVWTSQIS--QC 307
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
G + S S D V +W + D + HT H S+V +A A G L GS D +
Sbjct: 308 GRYIVSGSTDRTVKVW---STVDGSLLHTLQGHTSTVRCMAMA----GSILVTGSRDTTL 360
Query: 129 SVF 131
V+
Sbjct: 361 RVW 363
Score = 96 (38.9 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 36/124 (29%), Positives = 56/124 (45%)
Query: 118 SLAC-GSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQ 176
S+ C GS D +I V+ T G + + Q H +TS G+ L +
Sbjct: 431 SIVCSGSLDTSIRVWDFTRPEGQECVALLQGH-TSLTS-------------GMQLRGNI- 475
Query: 177 KLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGT 236
L SC D+ V+VW ++ G C L H + S+ W G ++ +A++S DGT
Sbjct: 476 -LVSCNADSHVRVWDIHEGT----CVHMLSGHRSAITSLQW---FG--RNMVATSSDDGT 525
Query: 237 VVIW 240
V +W
Sbjct: 526 VKLW 529
Score = 82 (33.9 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 31/109 (28%), Positives = 51/109 (46%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
+ S G D TVK+W + G C L H++ V S+ + +S + S S D ++
Sbjct: 391 VVSGGYDFTVKIWNAHTG----RCIRTLTGHNNRVYSLLFESE----RSIVCSGSLDTSI 442
Query: 238 VIWTCAK-EGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLW 284
+W + EG+ E L T + S L GN+L +A++ V +W
Sbjct: 443 RVWDFTRPEGQ--ECVALLQGHTSLTS-GMQLRGNILVSCNADSHVRVW 488
Score = 38 (18.4 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 178 LASCGCDNTVKVWKMYNG 195
+A+ D TVK+W + G
Sbjct: 517 VATSSDDGTVKLWDIERG 534
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 121 (47.7 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 46/147 (31%), Positives = 68/147 (46%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH TV +AM G L T S D+++++ + + +HLATL GH V V +
Sbjct: 336 GHTSTVRCMAMA--GSILVTGSRDTTLRVWDVESG--RHLATLHGHHAAVRCVQFD---- 387
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLAC-GSSDGN 127
G+ + S YD V IW N + T H + V S+ + E S+ C GS D +
Sbjct: 388 GTTVVSGGYDFTVKIW---NAHTGRCIRTLTGHNNRVYSLLF---ESERSIVCSGSLDTS 441
Query: 128 ISVFTATADGGWDTTRIDQAHPVGVTS 154
I V+ T G + + Q H +TS
Sbjct: 442 IRVWDFTRPEGQECVALLQGH-TSLTS 467
Score = 117 (46.2 bits), Expect = 0.00054, P = 0.00054
Identities = 31/125 (24%), Positives = 60/125 (48%)
Query: 8 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQH-LATLKGHRGPVWQVAWAHP 66
TGH + V+ + + + + S D+SI++ + Q +A L+GH +
Sbjct: 415 TGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTS----LTSGMQ 470
Query: 67 KFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDG 126
G+IL SC+ D V +W + ++ T H + H+S++ S+ W + +A S DG
Sbjct: 471 LRGNILVSCNADSHVRVW---DIHEGTCVHMLSGHRSAITSLQWFGRNM---VATSSDDG 524
Query: 127 NISVF 131
+ ++
Sbjct: 525 TVKLW 529
Score = 110 (43.8 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 38/123 (30%), Positives = 55/123 (44%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GHED V M + L T S D+++K+ + + TL GH G VW + +
Sbjct: 253 GHEDHVI-TCMQIHDDVLVTGSDDNTLKVWCIDKGEVMY--TLVGHTGGVWTSQIS--QC 307
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
G + S S D V +W + D + HT H S+V +A A G L GS D +
Sbjct: 308 GRYIVSGSTDRTVKVW---STVDGSLLHTLQGHTSTVRCMAMA----GSILVTGSRDTTL 360
Query: 129 SVF 131
V+
Sbjct: 361 RVW 363
Score = 96 (38.9 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 36/124 (29%), Positives = 56/124 (45%)
Query: 118 SLAC-GSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQ 176
S+ C GS D +I V+ T G + + Q H +TS G+ L +
Sbjct: 431 SIVCSGSLDTSIRVWDFTRPEGQECVALLQGH-TSLTS-------------GMQLRGNI- 475
Query: 177 KLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGT 236
L SC D+ V+VW ++ G C L H + S+ W G ++ +A++S DGT
Sbjct: 476 -LVSCNADSHVRVWDIHEGT----CVHMLSGHRSAITSLQW---FG--RNMVATSSDDGT 525
Query: 237 VVIW 240
V +W
Sbjct: 526 VKLW 529
Score = 82 (33.9 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 31/109 (28%), Positives = 51/109 (46%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
+ S G D TVK+W + G C L H++ V S+ + +S + S S D ++
Sbjct: 391 VVSGGYDFTVKIWNAHTG----RCIRTLTGHNNRVYSLLFESE----RSIVCSGSLDTSI 442
Query: 238 VIWTCAK-EGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLW 284
+W + EG+ E L T + S L GN+L +A++ V +W
Sbjct: 443 RVWDFTRPEGQ--ECVALLQGHTSLTS-GMQLRGNILVSCNADSHVRVW 488
Score = 38 (18.4 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 178 LASCGCDNTVKVWKMYNG 195
+A+ D TVK+W + G
Sbjct: 517 VATSSDDGTVKLWDIERG 534
>DICTYBASE|DDB_G0271788 [details] [associations]
symbol:wdr57 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA;ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0271788
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000006
GO:GO:0000398 KO:K12857 OMA:HAGSVNE HSSP:P61964 RefSeq:XP_645454.1
ProteinModelPortal:Q55AR8 STRING:Q55AR8 EnsemblProtists:DDB0233518
GeneID:8618082 KEGG:ddi:DDB_G0271788 Uniprot:Q55AR8
Length = 355
Score = 130 (50.8 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 41/153 (26%), Positives = 71/153 (46%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH+ ++ + YG LA+ SD I + + + + LKGH+G + ++ W+
Sbjct: 60 GHKGEIYSCKFNSYGTALASGGSDKEIFLWNVYGECINY-SVLKGHKGTILELHWSTDS- 117
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSL-ACGSSDGN 127
I +C+ D + +W + N+ + + +H VNS P G L A GS D +
Sbjct: 118 NEIYTACT-DKSIGVW-DSNKGELIKR--IREHSGVVNSCC--PARRGPPLVASGSDDRS 171
Query: 128 ISVFTATADGGWDTTRIDQAHPVGVTSVSWAPA 160
+F + G +T + Q H VTSV ++ A
Sbjct: 172 ARIFDTRSKG---STHLFQ-HKYPVTSVCFSDA 200
Score = 66 (28.3 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 27/119 (22%), Positives = 51/119 (42%)
Query: 173 DPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASAS 232
D +L + G DN ++VW + N + D L H D + S + + + G + + S S
Sbjct: 199 DASDQLITGGIDNVIRVWDIRN---QEDPLYTLASHQDTITSTSVSKD-G---AYLLSNS 251
Query: 233 QDGTVVIWTCA------KEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLW 284
D + IW + + + G +F+ + SWS+ G + ++ V +W
Sbjct: 252 MDNSCKIWDIRPYAPPNRNIKTFNG-AQNNFEKNLIKSSWSIDGRRIGCGSSDRQVYIW 309
>ASPGD|ASPL0000060163 [details] [associations]
symbol:AN1385 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IEA] [GO:0002098 "tRNA wobble uridine modification"
evidence=IEA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000208901 EMBL:AACD01000019 RefSeq:XP_658989.1
ProteinModelPortal:Q5BDJ5 STRING:Q5BDJ5 GeneID:2877158
KEGG:ani:AN1385.2 OMA:TAIWENI OrthoDB:EOG4CVKH5 Uniprot:Q5BDJ5
Length = 446
Score = 140 (54.3 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 50/193 (25%), Positives = 74/193 (38%)
Query: 20 DFYGKRLATASSDSSIKIIGLSNSASQH-------LATLKGHRGPVWQVAWAHPKFGSIL 72
D YG+ A + + K G + L GH V V+W+ G +L
Sbjct: 104 DDYGEEETLAQGNKNTKNFGAEEDREEDEDDEWRFAVLLDGHDSEVKSVSWSAS--GMLL 161
Query: 73 ASCSYDGQVIIWK--EGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISV 130
A+CS D + IW+ E N++ +H+ V +AW P E LA GS D I +
Sbjct: 162 ATCSRDKSIWIWEDLEDGDNNFETVAVMQEHEGDVKCVAWHPAEE--CLASGSYDDTIRI 219
Query: 131 FTATADGGWDTTRIDQAHPVGVTSVSWAPAMA---PGALVGLGLLDPVQK---------L 178
+ D W + H V + W A P G+ + K L
Sbjct: 220 WREDIDD-WGQVACIKGHTGTVWGIDWEDAENVPFPSTSNGVSGQEEEWKTWHALSGPRL 278
Query: 179 ASCGCDNTVKVWK 191
SC D +V+VW+
Sbjct: 279 VSCSHDQSVRVWR 291
Score = 136 (52.9 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 39/109 (35%), Positives = 53/109 (48%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKI---IGLSNSASQHLATLKGHRGPVWQVAWAH 65
GH+ V V+ G LAT S D SI I + ++ + +A ++ H G V VAW H
Sbjct: 144 GHDSEVKSVSWSASGMLLATCSRDKSIWIWEDLEDGDNNFETVAVMQEHEGDVKCVAW-H 202
Query: 66 PKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHE 114
P LAS SYD + IW+E + +DW Q H +V I W E
Sbjct: 203 PA-EECLASGSYDDTIRIWRE-DIDDWGQVACIKGHTGTVWGIDWEDAE 249
Score = 115 (45.5 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 33/119 (27%), Positives = 58/119 (48%)
Query: 178 LASCGCDNTVKVWK-MYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGT 236
LA+C D ++ +W+ + +G + +Q H V+ VAW P + +AS S D T
Sbjct: 161 LATCSRDKSIWIWEDLEDGDNNFETVAVMQEHEGDVKCVAWHP----AEECLASGSYDDT 216
Query: 237 VVIWTCAKEGEQWEGRV--LKDFKTPVWSVSWSLTGNLLAVADANNVTLWKEAVDGEWQ 293
+ IW ++ + W G+V +K VW + W N+ + +N V+ +E EW+
Sbjct: 217 IRIWR--EDIDDW-GQVACIKGHTGTVWGIDWEDAENVPFPSTSNGVSGQEE----EWK 268
Score = 115 (45.5 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 40/161 (24%), Positives = 72/161 (44%)
Query: 85 KEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADG--GWDTT 142
+E ++W A + H S V S++W+ G+ LA S D +I ++ DG ++T
Sbjct: 129 EEDEDDEWRFAVLLDGHDSEVKSVSWSAS--GMLLATCSRDKSIWIWEDLEDGDNNFETV 186
Query: 143 RIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIW-KMDC 201
+ Q H V V+W PA + LAS D+T+++W+ W ++ C
Sbjct: 187 AVMQEHEGDVKCVAWHPAE--------------ECLASGSYDDTIRIWREDIDDWGQVAC 232
Query: 202 FPALQMHSDWVRSVAW--APNLGLPKSTIASASQDGTVVIW 240
++ H+ V + W A N+ P ++ + Q+ W
Sbjct: 233 ---IKGHTGTVWGIDWEDAENVPFPSTSNGVSGQEEEWKTW 270
Score = 100 (40.3 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 27/101 (26%), Positives = 56/101 (55%)
Query: 205 LQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQ-WEG-RVLKDFKTPVW 262
L H V+SV+W+ + G+ +A+ S+D ++ IW ++G+ +E V+++ + V
Sbjct: 142 LDGHDSEVKSVSWSAS-GM---LLATCSRDKSIWIWEDLEDGDNNFETVAVMQEHEGDVK 197
Query: 263 SVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVVEPQT 302
V+W LA ++ + +W+E +D +W QV+ ++ T
Sbjct: 198 CVAWHPAEECLASGSYDDTIRIWREDID-DWGQVACIKGHT 237
Score = 86 (35.3 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 26/84 (30%), Positives = 46/84 (54%)
Query: 26 LATASSDSSIKIIGLSNSASQHLATLKG-HRGPVWQVAWAHPKFG-SILASCSYDGQVII 83
+AT SSD ++++ L N + L+T+ G H+ + AW G S+LA+ S+D V I
Sbjct: 42 VATCSSDKTVRVYSLVNF--RLLSTISGGHKRSIRTCAWKPNVSGESVLATGSFDATVGI 99
Query: 84 WKEGNQNDWTQAHTF-NDHKSSVN 106
W+ + D+ + T +K++ N
Sbjct: 100 WRRWD--DYGEEETLAQGNKNTKN 121
Score = 86 (35.3 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 27/90 (30%), Positives = 45/90 (50%)
Query: 154 SVSWAPAMAPGALVGLGLLDPVQKL---ASCGCDNTVKVWKMYNGIWKMDCFPALQMHSD 210
++S+ + P +L L P L A+C D TV+V+ + N +++ H
Sbjct: 15 ALSFLSDLTPPSLERTWLTAPHPTLPLVATCSSDKTVRVYSLVN--FRL-LSTISGGHKR 71
Query: 211 WVRSVAWAPNLGLPKSTIASASQDGTVVIW 240
+R+ AW PN+ +S +A+ S D TV IW
Sbjct: 72 SIRTCAWKPNVS-GESVLATGSFDATVGIW 100
Score = 84 (34.6 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 31/108 (28%), Positives = 49/108 (45%)
Query: 40 LSNSASQHLATLKGHRGPVWQVAWA---HPKFGSILASCSYDGQVIIWKEGNQNDWTQAH 96
+ +S S L+ L P + W HP ++A+CS D V ++ N +
Sbjct: 8 VQSSPSLALSFLSDLTPPSLERTWLTAPHPTL-PLVATCSSDKTVRVYSLVN---FRLLS 63
Query: 97 TFND-HKSSVNSIAWAPHELGLS-LACGSSDGNISVFTATADGGWDTT 142
T + HK S+ + AW P+ G S LA GS D + ++ D G + T
Sbjct: 64 TISGGHKRSIRTCAWKPNVSGESVLATGSFDATVGIWRRWDDYGEEET 111
Score = 83 (34.3 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 20/59 (33%), Positives = 36/59 (61%)
Query: 245 EGEQWEGRVLKD-FKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGE--WQQVSVVE 299
E ++W VL D + V SVSWS +G LLA + ++ +W++ DG+ ++ V+V++
Sbjct: 132 EDDEWRFAVLLDGHDSEVKSVSWSASGMLLATCSRDKSIWIWEDLEDGDNNFETVAVMQ 190
Score = 58 (25.5 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 26/108 (24%), Positives = 44/108 (40%)
Query: 182 GCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWT 241
G + K W +G + C H VR W PK+ + +A I
Sbjct: 262 GQEEEWKTWHALSGPRLVSC-----SHDQSVR--VWRRQ---PKAQLNTAGASSIPSIIR 311
Query: 242 CAKEGEQWEGRVLKDF--KTPVWSVSWSL-TGNLLAVADANNVTLWKE 286
+ E WE V+ + P+++V+WS TG L +V + +++E
Sbjct: 312 PSGTDETWEEDVVLPHAHELPIYAVAWSRRTGLLASVGADGRLVVYEE 359
Score = 41 (19.5 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 6/37 (16%), Positives = 16/37 (43%)
Query: 208 HSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAK 244
H W + + + + + + DG++ +WT +
Sbjct: 410 HVAWAKRADRGRDGNKEEEVLITTADDGSIKVWTLTR 446
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 115 (45.5 bits), Expect = 0.00068, P = 0.00068
Identities = 28/76 (36%), Positives = 45/76 (59%)
Query: 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFG 69
H V+ ++ G L TASSD ++KI+ L + + TL+GH GPV+ V+++ K G
Sbjct: 227 HSGGVNCISFHPSGNYLITASSDGTLKILDLLEG--RLIYTLQGHTGPVFTVSFS--KGG 282
Query: 70 SILASCSYDGQVIIWK 85
+ AS D QV++W+
Sbjct: 283 ELFASGGADTQVLLWR 298
Score = 102 (41.0 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 39/116 (33%), Positives = 60/116 (51%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
+AS G D TVKVW + + K+ Q+HS V +++ P+ G + + +AS DGT+
Sbjct: 201 IASAGSDQTVKVWDVR--VNKL--LQHYQVHSGGVNCISFHPS-G---NYLITASSDGTL 252
Query: 238 VIWTCAKEGEQWEGRV---LKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVD 289
I + EGR+ L+ PV++VS+S G L A A+ V LW+ D
Sbjct: 253 KIL------DLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTNFD 302
Score = 101 (40.6 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 35/124 (28%), Positives = 61/124 (49%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH+ + + + GK+LATAS D+ + + A + GH+ V V ++ P
Sbjct: 16 GHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYV--GHKDVVTSVQFS-PH- 71
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
G++LAS S D V +W + +++ F H + V S+ ++ G LA S D +I
Sbjct: 72 GNLLASASRDRTVRLWIPDKRGKFSE---FKAHTAPVRSVDFSAD--GQFLATASEDKSI 126
Query: 129 SVFT 132
V++
Sbjct: 127 KVWS 130
Score = 90 (36.7 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 32/126 (25%), Positives = 57/126 (45%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH+D V V +G LA+AS D ++++ + + + + K H PV V ++
Sbjct: 58 GHKDVVTSVQFSPHGNLLASASRDRTVRL-WIPDKRGK-FSEFKAHTAPVRSVDFSAD-- 113
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
G LA+ S D + +W Q ++ H V ++P + L ++C S D I
Sbjct: 114 GQFLATASEDKSIKVWSMYRQRF---LYSLYRHTHWVRCAKFSP-DGRLIVSC-SEDKTI 168
Query: 129 SVFTAT 134
++ T
Sbjct: 169 KIWDTT 174
Score = 64 (27.6 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 23/65 (35%), Positives = 30/65 (46%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGL-PKST-IASASQDG 235
+ SC D T+K+W N C + SD SV +A + P T IASA D
Sbjct: 159 IVSCSEDKTIKIWDTTN----KQC---VNNFSD---SVGFANFVDFNPSGTCIASAGSDQ 208
Query: 236 TVVIW 240
TV +W
Sbjct: 209 TVKVW 213
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 132 (51.5 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 46/156 (29%), Positives = 69/156 (44%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH + V V+ GK+LA+ S D+++++ L L T KGH+ V VAW+ P
Sbjct: 107 GHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETP--LFTCKGHKNWVLTVAWS-PD- 162
Query: 69 GSILASCSYDGQVIIW--KEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLAC----- 121
G L S S G++ W K+G + HK + I+W P + LS C
Sbjct: 163 GKHLVSGSKSGEICCWNPKKGE----LEGSPLTGHKKWITGISWEP--VHLSSPCRRFVT 216
Query: 122 GSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSW 157
S DG+ ++ T + H + VT V W
Sbjct: 217 SSKDGDARIWDITLK---KSIICLSGHTLAVTCVKW 249
Score = 124 (48.7 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 35/124 (28%), Positives = 59/124 (47%)
Query: 2 PAQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQV 61
P +++ TGH+ V+ V GK +A+AS D S+++ + Q + +GH GPV+QV
Sbjct: 352 PKKRL-TGHQQLVNHVYFSPDGKWIASASFDKSVRL--WNGITGQFVTVFRGHVGPVYQV 408
Query: 62 AWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLAC 121
+W+ +L S S D + IW+ + H V ++ W+P G +
Sbjct: 409 SWSADS--RLLLSGSKDSTLKIWEIRTKK---LKQDLPGHADEVFAVDWSPD--GEKVVS 461
Query: 122 GSSD 125
G D
Sbjct: 462 GGKD 465
Score = 98 (39.6 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 41/149 (27%), Positives = 63/149 (42%)
Query: 42 NSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDH 101
N SQ T+ GH V V+++ P G LAS S D V +W + T T H
Sbjct: 99 NRCSQ---TIAGHAEAVLCVSFS-PD-GKQLASGSGDTTVRLWDLYTE---TPLFTCKGH 150
Query: 102 KSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAM 161
K+ V ++AW+P G L GS G I + G + + + H +T +SW P
Sbjct: 151 KNWVLTVAWSPD--GKHLVSGSKSGEICCWNPKK-GELEGSPLT-GHKKWITGISWEP-- 204
Query: 162 APGALVGLGLLDPVQKLASCGCDNTVKVW 190
+ L P ++ + D ++W
Sbjct: 205 -------VHLSSPCRRFVTSSKDGDARIW 226
Score = 67 (28.6 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 33/114 (28%), Positives = 52/114 (45%)
Query: 173 DPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASAS 232
D ++L S D T+ +W+ + K L H V V ++P+ G IASAS
Sbjct: 327 DSPERLVSGSDDFTMFLWEP--SVSKQPK-KRLTGHQQLVNHVYFSPD-G---KWIASAS 379
Query: 233 QDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWK 285
D +V +W G Q+ V + PV+ VSWS LL ++ + +W+
Sbjct: 380 FDKSVRLWN-GITG-QFV-TVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWE 430
Score = 65 (27.9 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
L S D+T+K+W++ K D P H+D V +V W+P+ G + S +D +
Sbjct: 417 LLSGSKDSTLKIWEIRTKKLKQD-LPG---HADEVFAVDWSPD-G---EKVVSGGKDRVL 468
Query: 238 VIW 240
+W
Sbjct: 469 KLW 471
Score = 41 (19.5 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 176 QKLASCGCDNTVKVWK 191
+K+ S G D +K+WK
Sbjct: 457 EKVVSGGKDRVLKLWK 472
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 121 (47.7 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 39/125 (31%), Positives = 56/125 (44%)
Query: 8 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPK 67
+GHE V+ +G LA+A D I + + + ATLKGH G V ++ +
Sbjct: 90 SGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDCDNY-ATLKGHSGAVMELHYNTD- 147
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLAC-GSSDG 126
GS+L S S D V +W + + H S VNS P G L C GS DG
Sbjct: 148 -GSMLFSASTDKTVAVW---DSETGERVKRLKGHTSFVNSCY--PARRGPQLVCTGSDDG 201
Query: 127 NISVF 131
+ ++
Sbjct: 202 TVKLW 206
Score = 76 (31.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 33/119 (27%), Positives = 55/119 (46%)
Query: 173 DPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASAS 232
D ++ S G DN +KVW + K+ ++ H+D V ++ L S + S +
Sbjct: 230 DTSDQIISGGIDNDIKVWDLRQN--KLTY--TMRGHADSVTGLS----LSSEGSYLLSNA 281
Query: 233 QDGTVVIWT----CAKEG--EQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLW 284
D TV IW KE + ++G V +F+ + SWS G+ +A A+ V +W
Sbjct: 282 MDNTVRIWDVRPFAPKERCVKIFQGNV-HNFEKNLLRCSWSPDGSKIAGGSADRFVYVW 339
Score = 67 (28.6 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 25/81 (30%), Positives = 38/81 (46%)
Query: 165 ALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQ--MHS---DWVRSVAWAP 219
++ GL L L S DNTV++W + K C Q +H+ + +R +W+P
Sbjct: 264 SVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRC-SWSP 322
Query: 220 NLGLPKSTIASASQDGTVVIW 240
+ G S IA S D V +W
Sbjct: 323 D-G---SKIAGGSADRFVYVW 339
>DICTYBASE|DDB_G0293070 [details] [associations]
symbol:DDB_G0293070 "TROVE domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005697 "telomerase holoenzyme complex"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320
dictyBase:DDB_G0293070 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003723 EMBL:AAFI02000199
GO:GO:0005697 KO:K11127 InterPro:IPR025139 Pfam:PF13271
RefSeq:XP_629304.1 ProteinModelPortal:Q54CB5 PRIDE:Q54CB5
EnsemblProtists:DDB0237515 GeneID:8629027 KEGG:ddi:DDB_G0293070
InParanoid:Q54CB5 OMA:LPSDWIE ProtClustDB:CLSZ2429313
Uniprot:Q54CB5
Length = 2430
Score = 156 (60.0 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 54/173 (31%), Positives = 74/173 (42%)
Query: 8 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPK 67
TG ED G +A+A DS I I SN + L TL GH W ++
Sbjct: 1519 TGLEDGATACCYSRDGSMIASAGKDSIIHIFKASNGSE--LLTLVGHSN--WISCFSFSD 1574
Query: 68 FGSILASCSYDGQVIIWK--EGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD 125
G LAS S+D VI+W GNQ H F DH +VN ++P L ++C + D
Sbjct: 1575 DGKTLASSSWDNTVIVWDLIVGNQ-----IHQFKDHSRAVNYCEFSPTANNLLMSC-AWD 1628
Query: 126 GNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKL 178
+I +F + + R AH V S W+P G L+ D K+
Sbjct: 1629 SSIIIFNTSDKNIFRNFR--SAHSKPVNSCCWSP---DGTLIASSSWDGTIKI 1676
Score = 53 (23.7 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 24/91 (26%), Positives = 40/91 (43%)
Query: 184 DNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCA 243
D T KVW G ++ F L W +A++P L +A + D TV ++ +
Sbjct: 1761 DATAKVWSSTLGT-QLTNF--LIPGDCWANCLAFSPTQPL----LAVGATDCTVRLFDVS 1813
Query: 244 KEGEQWEGRVLKDFKTPVWSVSWSLTGNLLA 274
E L + S+++S +GNL+A
Sbjct: 1814 SNTIYREVAKLHGHTRAITSITFSPSGNLIA 1844
Score = 51 (23.0 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 14/69 (20%), Positives = 35/69 (50%)
Query: 177 KLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGT 236
+L SC D + KVW + + + + ++ ++ ++P+ G IA+ S+D +
Sbjct: 1886 ELISCSDDYSTKVWSRFTTSTTL----STEGSTNTIKHCVYSPD-G---KYIATVSRDCS 1937
Query: 237 VVIWTCAKE 245
+ ++ C+ +
Sbjct: 1938 IAVYLCSSK 1946
Score = 50 (22.7 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 9/14 (64%), Positives = 12/14 (85%)
Query: 227 TIASASQDGTVVIW 240
+IAS+S DGTV +W
Sbjct: 2119 SIASSSDDGTVKLW 2132
Score = 48 (22.0 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 14/50 (28%), Positives = 20/50 (40%)
Query: 173 DPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLG 222
D ++ S D +K W G C L HS ++ V + PN G
Sbjct: 2050 DASGRIFSSSDDGIIKSWYPVAG----SCLATLTGHSGPIKQVQFNPNSG 2095
>WB|WBGene00021074 [details] [associations]
symbol:W07E6.2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003
GeneTree:ENSGT00690000102167 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH InterPro:IPR012972
Pfam:PF08154 EMBL:FO081752 PIR:T33805 RefSeq:NP_493745.1
ProteinModelPortal:Q9TYV3 SMR:Q9TYV3 STRING:Q9TYV3 PaxDb:Q9TYV3
EnsemblMetazoa:W07E6.2.1 EnsemblMetazoa:W07E6.2.2 GeneID:173439
KEGG:cel:CELE_W07E6.2 UCSC:W07E6.2 CTD:173439 WormBase:W07E6.2
InParanoid:Q9TYV3 NextBio:879659 Uniprot:Q9TYV3
Length = 473
Score = 143 (55.4 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 47/155 (30%), Positives = 69/155 (44%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH + V G+ LA+ S D +++I + H T K H+ V +AW+ P
Sbjct: 103 GHGEPVISAQFSPDGRGLASGSGDQTMRIWDIELELPLH--TCKSHKSWVLCIAWS-PDA 159
Query: 69 GSILASCSYDGQVIIW--KEGNQNDWTQAHTFNDHKSSVNSIAWAP-HE---LGLSLACG 122
I ++C +G++ IW K G Q T HK + S+AW P H+ L +CG
Sbjct: 160 TKIASACK-NGEICIWNAKTGEQI----GKTLKRHKQWITSLAWQPMHKDPTCRLLASCG 214
Query: 123 SSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSW 157
DGNI ++ T G R H VT + W
Sbjct: 215 K-DGNIFIWD-TVQG--TVVRCLSGHTASVTCLRW 245
Score = 125 (49.1 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 67/294 (22%), Positives = 118/294 (40%)
Query: 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWA--HPK 67
H+ V +A ++A+A + I I + + Q TLK H+ + +AW H
Sbjct: 146 HKSWVLCIAWSPDATKIASACKNGEICIWN-AKTGEQIGKTLKRHKQWITSLAWQPMHKD 204
Query: 68 -FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDG 126
+LASC DG + IW + T + H +SV + W GL + GS D
Sbjct: 205 PTCRLLASCGKDGNIFIW---DTVQGTVVRCLSGHTASVTCLRWGGE--GL-IYSGSQDR 258
Query: 127 NISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGAL------VGLGLLDPVQKLAS 180
+ ++ A DG AH + +++ A+ + ++ QK+A
Sbjct: 259 TVKMWRAD-DGVMCRNMTGHAHWINTLALNTDYALRTSCFEPSKRCIKPDTVEECQKVAQ 317
Query: 181 CGCDNTVKVW---KMYNG-------IWK----MDCFPALQMHSDWVRSVAWAPNLGLPKS 226
+ +++ ++ +G +W + H V V ++P+
Sbjct: 318 TRYEAALEIAGGERLVSGSDDFTLFMWNPKETKQSINRMTGHMQLVNQVVFSPDTRY--- 374
Query: 227 TIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN 280
IASAS D +V +W C + G+ L+ PV+ V+WS LL A++
Sbjct: 375 -IASASFDKSVKLW-CGRTGKYLAS--LRGHVGPVYQVAWSADSRLLVSGSADS 424
Score = 124 (48.7 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 39/119 (32%), Positives = 60/119 (50%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
LAS D T+++W + + C + H WV +AW+P+ + IASA ++G +
Sbjct: 120 LASGSGDQTMRIWDIELELPLHTC----KSHKSWVLCIAWSPDA----TKIASACKNGEI 171
Query: 238 VIWTCAKEGEQWEGRVLKDFKTPVWSVSWSL-----TGNLLAVADAN-NVTLWKEAVDG 290
IW AK GEQ G+ LK K + S++W T LLA + N+ +W + V G
Sbjct: 172 CIWN-AKTGEQI-GKTLKRHKQWITSLAWQPMHKDPTCRLLASCGKDGNIFIW-DTVQG 227
Score = 123 (48.4 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 45/148 (30%), Positives = 65/148 (43%)
Query: 49 ATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSI 108
A++ GH PV ++ P G LAS S D + IW + HT HKS V I
Sbjct: 99 ASIPGHGEPVISAQFS-PD-GRGLASGSGDQTMRIWDIELE---LPLHTCKSHKSWVLCI 153
Query: 109 AWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVG 168
AW+P ++ AC +G I ++ A G + + H +TS++W P
Sbjct: 154 AWSPDATKIASAC--KNGEICIWNAKT--GEQIGKTLKRHKQWITSLAWQPMHK------ 203
Query: 169 LGLLDPVQKL-ASCGCDNTVKVWKMYNG 195
DP +L ASCG D + +W G
Sbjct: 204 ----DPTCRLLASCGKDGNIFIWDTVQG 227
Score = 123 (48.4 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 34/118 (28%), Positives = 59/118 (50%)
Query: 8 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPK 67
TGH V+ V + +A+AS D S+K+ ++LA+L+GH GPV+QVAW+
Sbjct: 357 TGHMQLVNQVVFSPDTRYIASASFDKSVKL--WCGRTGKYLASLRGHVGPVYQVAWSADS 414
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD 125
+L S S D + +++ ++ + + H V ++ W+P G + G D
Sbjct: 415 --RLLVSGSADSTLKVFELKTKSLY---YDLPGHGDEVFTVDWSPE--GTKVVSGGKD 465
Score = 53 (23.7 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 18/63 (28%), Positives = 30/63 (47%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
L S D+T+KV+++ D L H D V +V W+P G + + S +D +
Sbjct: 417 LVSGSADSTLKVFELKTKSLYYD----LPGHGDEVFTVDWSPE-G---TKVVSGGKDKVL 468
Query: 238 VIW 240
+W
Sbjct: 469 KLW 471
>DICTYBASE|DDB_G0285601 [details] [associations]
symbol:cdc20 "cdc20/fizzy domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 UniPathway:UPA00143
dictyBase:DDB_G0285601 GO:GO:0005634 GO:GO:0045335 GO:GO:0051301
GO:GO:0007067 GenomeReviews:CM000153_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
EMBL:AAFI02000079 eggNOG:COG2319 GO:GO:0016567 RefSeq:XP_638150.1
ProteinModelPortal:Q54MZ3 STRING:Q54MZ3 EnsemblProtists:DDB0237885
GeneID:8625198 KEGG:ddi:DDB_G0285601 KO:K03363 OMA:DAGTYSI
ProtClustDB:CLSZ2430186 Uniprot:Q54MZ3
Length = 499
Score = 152 (58.6 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 48/151 (31%), Positives = 74/151 (49%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH V +A + Y L++ SSD++I + + H++TL GH V + W+H
Sbjct: 263 GHAGRVGALAWNDY--ILSSGSSDTNIFNHDV-RVQNHHVSTLSGHSQEVCGLKWSHD-- 317
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
G LAS D + IW ++N T AHTF H ++V ++AW P + L LA G +
Sbjct: 318 GGQLASGGNDNIINIWDINSENFETPAHTFEQHTAAVRALAWCPFQPNL-LATGGGAADR 376
Query: 129 SV-FTATADGGWDTTRIDQAHPVGVTSVSWA 158
++ F T G T +D V S+ W+
Sbjct: 377 TIRFWNTITGVCLNT-VDTMSQV--CSIQWS 404
Score = 43 (20.2 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 185 NTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW 240
N + VWK Y + K C L H+ A +P+ G T+ SAS D T+ W
Sbjct: 419 NQLCVWK-YPSMVK--C-AELTGHTSRALHTAISPD-G---ETVVSASADETLRFW 466
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 117 (46.2 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 39/125 (31%), Positives = 55/125 (44%)
Query: 8 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPK 67
+GHE V+ G LA+A D I + + + ATLKGH G V ++ +
Sbjct: 63 SGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNY-ATLKGHSGAVMELHYNTD- 120
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLAC-GSSDG 126
GS+L S S D V +W + + H S VNS P G L C GS DG
Sbjct: 121 -GSMLFSASTDKTVAVW---DSETGERVKRLKGHTSFVNSCY--PARRGPQLVCTGSDDG 174
Query: 127 NISVF 131
+ ++
Sbjct: 175 TVKLW 179
Score = 79 (32.9 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 37/137 (27%), Positives = 56/137 (40%)
Query: 42 NSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDH 101
+S + L GH G V+ + HP GS LAS +D +++W D T H
Sbjct: 53 SSLQAPIMLLSGHEGEVYCCKF-HPN-GSTLASAGFDRLILLWNV--YGDCDNYATLKGH 108
Query: 102 KSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAM 161
+V + + G L S+D ++V+ + + G R+ + H V S PA
Sbjct: 109 SGAVMELHYNTD--GSMLFSASTDKTVAVWDS--ETGERVKRL-KGHTSFVNSCY--PAR 161
Query: 162 APGALVGLGLLDPVQKL 178
LV G D KL
Sbjct: 162 RGPQLVCTGSDDGTVKL 178
Score = 78 (32.5 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 32/119 (26%), Positives = 55/119 (46%)
Query: 173 DPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASAS 232
D ++ S G DN +KVW + K+ ++ H+D V ++ L S + S +
Sbjct: 203 DTSDQIISGGIDNDIKVWDLRQN--KLTY--TMRGHADSVTGLS----LSSEGSYLLSNA 254
Query: 233 QDGTVVIWT----CAKEG--EQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLW 284
D TV +W KE + ++G V +F+ + SWS G+ +A A+ V +W
Sbjct: 255 MDNTVRVWDVRPFAPKERCVKIFQGNV-HNFEKNLLRCSWSPDGSKIAAGSADRFVYVW 312
Score = 69 (29.3 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 26/81 (32%), Positives = 39/81 (48%)
Query: 165 ALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQ--MHS---DWVRSVAWAP 219
++ GL L L S DNTV+VW + K C Q +H+ + +R +W+P
Sbjct: 237 SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC-SWSP 295
Query: 220 NLGLPKSTIASASQDGTVVIW 240
+ G S IA+ S D V +W
Sbjct: 296 D-G---SKIAAGSADRFVYVW 312
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 117 (46.2 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 39/125 (31%), Positives = 55/125 (44%)
Query: 8 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPK 67
+GHE V+ G LA+A D I + + + ATLKGH G V ++ +
Sbjct: 64 SGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNY-ATLKGHSGAVMELHYNTD- 121
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLAC-GSSDG 126
GS+L S S D V +W + + H S VNS P G L C GS DG
Sbjct: 122 -GSMLFSASTDKTVAVW---DSETGERVKRLKGHTSFVNSCY--PARRGPQLVCTGSDDG 175
Query: 127 NISVF 131
+ ++
Sbjct: 176 TVKLW 180
Score = 79 (32.9 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 37/137 (27%), Positives = 56/137 (40%)
Query: 42 NSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDH 101
+S + L GH G V+ + HP GS LAS +D +++W D T H
Sbjct: 54 SSLQAPIMLLSGHEGEVYCCKF-HPN-GSTLASAGFDRLILLWNV--YGDCDNYATLKGH 109
Query: 102 KSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAM 161
+V + + G L S+D ++V+ + + G R+ + H V S PA
Sbjct: 110 SGAVMELHYNTD--GSMLFSASTDKTVAVWDS--ETGERVKRL-KGHTSFVNSCY--PAR 162
Query: 162 APGALVGLGLLDPVQKL 178
LV G D KL
Sbjct: 163 RGPQLVCTGSDDGTVKL 179
Score = 78 (32.5 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 32/119 (26%), Positives = 55/119 (46%)
Query: 173 DPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASAS 232
D ++ S G DN +KVW + K+ ++ H+D V ++ L S + S +
Sbjct: 204 DTSDQIISGGIDNDIKVWDLRQN--KLTY--TMRGHADSVTGLS----LSSEGSYLLSNA 255
Query: 233 QDGTVVIWT----CAKEG--EQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLW 284
D TV +W KE + ++G V +F+ + SWS G+ +A A+ V +W
Sbjct: 256 MDNTVRVWDVRPFAPKERCVKIFQGNV-HNFEKNLLRCSWSPDGSKIAAGSADRFVYVW 313
Score = 69 (29.3 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 26/81 (32%), Positives = 39/81 (48%)
Query: 165 ALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQ--MHS---DWVRSVAWAP 219
++ GL L L S DNTV+VW + K C Q +H+ + +R +W+P
Sbjct: 238 SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC-SWSP 296
Query: 220 NLGLPKSTIASASQDGTVVIW 240
+ G S IA+ S D V +W
Sbjct: 297 D-G---SKIAAGSADRFVYVW 313
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 117 (46.2 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 39/125 (31%), Positives = 55/125 (44%)
Query: 8 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPK 67
+GHE V+ G LA+A D I + + + ATLKGH G V ++ +
Sbjct: 64 SGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNY-ATLKGHSGAVMELHYNTD- 121
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLAC-GSSDG 126
GS+L S S D V +W + + H S VNS P G L C GS DG
Sbjct: 122 -GSMLFSASTDKTVAVW---DSETGERVKRLKGHTSFVNSCY--PARRGPQLVCTGSDDG 175
Query: 127 NISVF 131
+ ++
Sbjct: 176 TVKLW 180
Score = 79 (32.9 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 37/137 (27%), Positives = 56/137 (40%)
Query: 42 NSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDH 101
+S + L GH G V+ + HP GS LAS +D +++W D T H
Sbjct: 54 SSLQAPIMLLSGHEGEVYCCKF-HPN-GSTLASAGFDRLILLWNV--YGDCDNYATLKGH 109
Query: 102 KSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAM 161
+V + + G L S+D ++V+ + + G R+ + H V S PA
Sbjct: 110 SGAVMELHYNTD--GSMLFSASTDKTVAVWDS--ETGERVKRL-KGHTSFVNSCY--PAR 162
Query: 162 APGALVGLGLLDPVQKL 178
LV G D KL
Sbjct: 163 RGPQLVCTGSDDGTVKL 179
Score = 78 (32.5 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 32/119 (26%), Positives = 55/119 (46%)
Query: 173 DPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASAS 232
D ++ S G DN +KVW + K+ ++ H+D V ++ L S + S +
Sbjct: 204 DTSDQIISGGIDNDIKVWDLRQN--KLTY--TMRGHADSVTGLS----LSSEGSYLLSNA 255
Query: 233 QDGTVVIWT----CAKEG--EQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLW 284
D TV +W KE + ++G V +F+ + SWS G+ +A A+ V +W
Sbjct: 256 MDNTVRVWDVRPFAPKERCVKIFQGNV-HNFEKNLLRCSWSPDGSKIAAGSADRFVYVW 313
Score = 69 (29.3 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 26/81 (32%), Positives = 39/81 (48%)
Query: 165 ALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQ--MHS---DWVRSVAWAP 219
++ GL L L S DNTV+VW + K C Q +H+ + +R +W+P
Sbjct: 238 SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC-SWSP 296
Query: 220 NLGLPKSTIASASQDGTVVIW 240
+ G S IA+ S D V +W
Sbjct: 297 D-G---SKIAAGSADRFVYVW 313
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 117 (46.2 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 39/125 (31%), Positives = 55/125 (44%)
Query: 8 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPK 67
+GHE V+ G LA+A D I + + + ATLKGH G V ++ +
Sbjct: 64 SGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNY-ATLKGHSGAVMELHYNTD- 121
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLAC-GSSDG 126
GS+L S S D V +W + + H S VNS P G L C GS DG
Sbjct: 122 -GSMLFSASTDKTVAVW---DSETGERVKRLKGHTSFVNSCY--PARRGPQLVCTGSDDG 175
Query: 127 NISVF 131
+ ++
Sbjct: 176 TVKLW 180
Score = 79 (32.9 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 37/137 (27%), Positives = 56/137 (40%)
Query: 42 NSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDH 101
+S + L GH G V+ + HP GS LAS +D +++W D T H
Sbjct: 54 SSLQAPIMLLSGHEGEVYCCKF-HPN-GSTLASAGFDRLILLWNV--YGDCDNYATLKGH 109
Query: 102 KSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAM 161
+V + + G L S+D ++V+ + + G R+ + H V S PA
Sbjct: 110 SGAVMELHYNTD--GSMLFSASTDKTVAVWDS--ETGERVKRL-KGHTSFVNSCY--PAR 162
Query: 162 APGALVGLGLLDPVQKL 178
LV G D KL
Sbjct: 163 RGPQLVCTGSDDGTVKL 179
Score = 78 (32.5 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 32/119 (26%), Positives = 55/119 (46%)
Query: 173 DPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASAS 232
D ++ S G DN +KVW + K+ ++ H+D V ++ L S + S +
Sbjct: 204 DTSDQIISGGIDNDIKVWDLRQN--KLTY--TMRGHADSVTGLS----LSSEGSYLLSNA 255
Query: 233 QDGTVVIWT----CAKEG--EQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLW 284
D TV +W KE + ++G V +F+ + SWS G+ +A A+ V +W
Sbjct: 256 MDNTVRVWDVRPFAPKERCVKIFQGNV-HNFEKNLLRCSWSPDGSKIAAGSADRFVYVW 313
Score = 69 (29.3 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 26/81 (32%), Positives = 39/81 (48%)
Query: 165 ALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQ--MHS---DWVRSVAWAP 219
++ GL L L S DNTV+VW + K C Q +H+ + +R +W+P
Sbjct: 238 SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC-SWSP 296
Query: 220 NLGLPKSTIASASQDGTVVIW 240
+ G S IA+ S D V +W
Sbjct: 297 D-G---SKIAAGSADRFVYVW 313
>RGD|1305142 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1305142 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 CTD:10607
HOGENOM:HOG000188765 HOVERGEN:HBG058869 KO:K14555 OrthoDB:EOG42JNQR
GeneTree:ENSGT00690000102183 EMBL:BC085837 IPI:IPI00369236
RefSeq:NP_001008278.1 UniGene:Rn.32013 ProteinModelPortal:Q5U2W5
STRING:Q5U2W5 PRIDE:Q5U2W5 Ensembl:ENSRNOT00000018405 GeneID:287120
KEGG:rno:287120 UCSC:RGD:1305142 InParanoid:Q5U2W5 NextBio:625544
Genevestigator:Q5U2W5 Uniprot:Q5U2W5
Length = 800
Score = 136 (52.9 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 39/132 (29%), Positives = 63/132 (47%)
Query: 1 MPAQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQ 60
+ AQ + H+ ++ +A+ K LAT S D + K+ L Q L GHR +W
Sbjct: 469 LQAQSTQRCHDKDINSLAVSPNDKLLATGSQDRTAKLWALPQC--QLLGVFSGHRRGLWN 526
Query: 61 VAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLA 120
V ++ P +LA+ S DG + +W D++ TF H +SV +A+ G L
Sbjct: 527 VQFS-PT-DQVLATASADGTIKLWA---LQDFSCLKTFEGHDASVLKVAFVSR--GAQLL 579
Query: 121 CGSSDGNISVFT 132
SDG + ++T
Sbjct: 580 SSGSDGLLKLWT 591
Score = 66 (28.3 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 18/80 (22%), Positives = 32/80 (40%)
Query: 177 KLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGT 236
+L S G D +K+W + + +C L H D V W + + D
Sbjct: 577 QLLSSGSDGLLKLWTIKSN----ECVRTLDAHEDKV----WGLHCSRLDDHAITGGSDSR 628
Query: 237 VVIWTCAKEGEQWEGRVLKD 256
+++W E EQ E + ++
Sbjct: 629 IILWKDVTEAEQAEEQAKRE 648
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 117 (46.2 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 39/125 (31%), Positives = 55/125 (44%)
Query: 8 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPK 67
+GHE V+ G LA+A D I + + + ATLKGH G V ++ +
Sbjct: 64 SGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNY-ATLKGHSGAVMELHYNTD- 121
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLAC-GSSDG 126
GS+L S S D V +W + + H S VNS P G L C GS DG
Sbjct: 122 -GSMLFSASTDKTVAVW---DSETGERVKRLKGHTSFVNSCY--PARRGPQLVCTGSDDG 175
Query: 127 NISVF 131
+ ++
Sbjct: 176 TVKLW 180
Score = 79 (32.9 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 37/137 (27%), Positives = 56/137 (40%)
Query: 42 NSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDH 101
+S + L GH G V+ + HP GS LAS +D +++W D T H
Sbjct: 54 SSLQAPIMLLSGHEGEVYCCKF-HPN-GSTLASAGFDRLILLWNV--YGDCDNYATLKGH 109
Query: 102 KSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAM 161
+V + + G L S+D ++V+ + + G R+ + H V S PA
Sbjct: 110 SGAVMELHYNTD--GSMLFSASTDKTVAVWDS--ETGERVKRL-KGHTSFVNSCY--PAR 162
Query: 162 APGALVGLGLLDPVQKL 178
LV G D KL
Sbjct: 163 RGPQLVCTGSDDGTVKL 179
Score = 77 (32.2 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 32/119 (26%), Positives = 54/119 (45%)
Query: 173 DPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASAS 232
D ++ S G DN +KVW + K+ ++ H+D V ++ L S + S +
Sbjct: 204 DTSDQIISGGIDNDIKVWDLRQN--KLTY--TMRGHADSVTGLS----LSSEGSYLLSNA 255
Query: 233 QDGTVVIWT----CAKEG--EQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLW 284
D TV +W KE ++G V +F+ + SWS G+ +A A+ V +W
Sbjct: 256 MDNTVRVWDVRPFAPKERCVRIFQGNV-HNFEKNLLRCSWSPDGSKIAAGSADRFVYVW 313
Score = 68 (29.0 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 26/81 (32%), Positives = 39/81 (48%)
Query: 165 ALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQ--MHS---DWVRSVAWAP 219
++ GL L L S DNTV+VW + K C Q +H+ + +R +W+P
Sbjct: 238 SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRC-SWSP 296
Query: 220 NLGLPKSTIASASQDGTVVIW 240
+ G S IA+ S D V +W
Sbjct: 297 D-G---SKIAAGSADRFVYVW 313
>ZFIN|ZDB-GENE-041014-277 [details] [associations]
symbol:wdr26b "WD repeat domain 26b" species:7955
"Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667
ZFIN:ZDB-GENE-041014-277 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AL929435 HSSP:P16649
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 EMBL:BX004824 IPI:IPI00504405 RefSeq:NP_001189371.1
UniGene:Dr.156389 UniGene:Dr.79849 ProteinModelPortal:Q5SP67
PRIDE:Q5SP67 Ensembl:ENSDART00000029894 GeneID:564794
KEGG:dre:564794 CTD:564794 HOGENOM:HOG000160946 HOVERGEN:HBG083958
InParanoid:Q5SP67 OMA:IRGQFYQ OrthoDB:EOG4GHZNV NextBio:20885564
Bgee:Q5SP67 Uniprot:Q5SP67
Length = 576
Score = 123 (48.4 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 34/110 (30%), Positives = 56/110 (50%)
Query: 51 LKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWK-EGNQNDWTQAHTFNDHKSSVNSIA 109
L H VW +++ G+ LA+ S D VIIW+ E + + T H V+ +A
Sbjct: 263 LTEHCNEVWFCKFSND--GTKLATGSKDTTVIIWQVEPDTHQLKLLRTLEGHAYGVSYLA 320
Query: 110 WAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAP 159
W+P ++ L +ACG D + ++ G T++ Q+H +TSV+W P
Sbjct: 321 WSPDDVYL-IACGPDDCS-ELWLWNVQTGELRTKMSQSHEDSLTSVAWNP 368
Score = 102 (41.0 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 40/147 (27%), Positives = 60/147 (40%)
Query: 4 QKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQH--LATLKGHRGPVWQV 61
Q+I T H + V G +LAT S D+++ I + Q L TL+GH V +
Sbjct: 260 QQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVEPDTHQLKLLRTLEGHAYGVSYL 319
Query: 62 AWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLAC 121
AW+ P ++A C D +W Q + H+ S+ S+AW P G
Sbjct: 320 AWS-PDDVYLIA-CGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPD--GKRFVT 375
Query: 122 GSSDGNISVFTATADGG----WDTTRI 144
G G + DG W+ R+
Sbjct: 376 GGQRGQF--YQCDLDGNLLESWEGVRV 400
Score = 76 (31.8 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 23/53 (43%), Positives = 31/53 (58%)
Query: 191 KMYNGIW-KMDCFPALQM--HSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW 240
K+Y IW K P +++ H+ V V+W P + P S +ASAS DGTV IW
Sbjct: 506 KVY--IWHKRSELPIVELTGHTRTVNCVSWNPCI--P-SLMASASDDGTVRIW 553
Score = 48 (22.0 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 22/62 (35%), Positives = 27/62 (43%)
Query: 228 IASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWS-LTGNLLAVA-DANNVTLWK 285
IAS S+D V IW E E L V VSW+ +L+A A D V +W
Sbjct: 498 IASGSEDHKVYIWHKRSELPIVE---LTGHTRTVNCVSWNPCIPSLMASASDDGTVRIWG 554
Query: 286 EA 287
A
Sbjct: 555 PA 556
Score = 38 (18.4 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 178 LASCGCDNTVKVW 190
+AS D TV++W
Sbjct: 541 MASASDDGTVRIW 553
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 102 (41.0 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 39/116 (33%), Positives = 61/116 (52%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
+AS G D+TVK+W + + K+ Q+HS V V++ P+ G + I +AS DGT+
Sbjct: 201 IASAGSDHTVKIWDIR--VNKL--LQHYQVHSGGVNCVSFHPS-G---NYIITASSDGTL 252
Query: 238 VIWTCAKEGEQWEGRV---LKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVD 289
I + EGR+ L+ PV++VS+S G L + A+ V LW+ D
Sbjct: 253 KIL------DLLEGRLIYTLQGHTGPVFTVSFSKGGELFSSGGADTQVLLWRTNFD 302
Score = 97 (39.2 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 39/124 (31%), Positives = 59/124 (47%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLA-TLKGHRGPVWQVAWAHPK 67
GH+ + V GK+LATAS D+ + L N Q A GH+ V V ++ P
Sbjct: 16 GHKAAITSVDFSPSGKQLATASWDTFLM---LWNCKPQARAFRYVGHKDVVTSVQFS-P- 70
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGN 127
G++LAS S D V +W + ++ F H + V S+ ++ G LA S D +
Sbjct: 71 LGNLLASASRDRTVRLWIPDKRG---KSSEFKAHTAPVRSVDFSAD--GQFLATASEDKS 125
Query: 128 ISVF 131
I V+
Sbjct: 126 IKVW 129
Score = 90 (36.7 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 23/65 (35%), Positives = 34/65 (52%)
Query: 176 QKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDG 235
Q LA+ D ++KVW MY + +L H+ WVR ++P+ L I S S+D
Sbjct: 115 QFLATASEDKSIKVWNMY----RQRFLYSLYRHTHWVRCAKFSPDGRL----IVSCSEDK 166
Query: 236 TVVIW 240
T+ IW
Sbjct: 167 TIKIW 171
Score = 86 (35.3 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 32/126 (25%), Positives = 56/126 (44%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH+D V V G LA+AS D ++++ + + + + K H PV V ++
Sbjct: 58 GHKDVVTSVQFSPLGNLLASASRDRTVRL-WIPDKRGKS-SEFKAHTAPVRSVDFSAD-- 113
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
G LA+ S D + +W Q ++ H V ++P + L ++C S D I
Sbjct: 114 GQFLATASEDKSIKVWNMYRQRF---LYSLYRHTHWVRCAKFSP-DGRLIVSC-SEDKTI 168
Query: 129 SVFTAT 134
++ T
Sbjct: 169 KIWDTT 174
Score = 66 (28.3 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 21/63 (33%), Positives = 27/63 (42%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
+ SC D T+K+W N C + V + PN G + IASA D TV
Sbjct: 159 IVSCSEDKTIKIWDTTN----KQCVNNFSDSVGFANFVDFNPN-G---TCIASAGSDHTV 210
Query: 238 VIW 240
IW
Sbjct: 211 KIW 213
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 115 (45.5 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 38/124 (30%), Positives = 58/124 (46%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH D + V K+LA+ S DS +KI + + L GH+ V V ++ P
Sbjct: 18 GHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYC--LVGHKDAVMCVQFS-PS- 73
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
G ++AS S D V +W + + T F H ++V S+ ++ G SL S D I
Sbjct: 74 GHLVASGSRDKTVCLWVPSVKGEST---VFKAHTATVRSVHFSSD--GQSLVTASDDKTI 128
Query: 129 SVFT 132
V+T
Sbjct: 129 KVWT 132
Score = 112 (44.5 bits), Expect = 0.00075, P = 0.00075
Identities = 29/76 (38%), Positives = 43/76 (56%)
Query: 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFG 69
H V+ ++ G L TAS+DS++KI+ L + L TL GH+GP VA++ + G
Sbjct: 229 HTAAVNSLSFHPSGNYLITASNDSTLKILDLLEG--RLLYTLHGHQGPATCVAFS--RTG 284
Query: 70 SILASCSYDGQVIIWK 85
AS D QV++WK
Sbjct: 285 DFFASGGSDEQVMVWK 300
Score = 77 (32.2 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 33/113 (29%), Positives = 57/113 (50%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMD-CFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGT 236
+A+ G D TVKVW + +M+ Q+H+ V S+++ P+ G + + +AS D T
Sbjct: 203 IAAAGTDKTVKVWDV-----RMNRLLQHYQVHTAAVNSLSFHPS-G---NYLITASNDST 253
Query: 237 VVIWTCAKEGEQWEGRVLKDF---KTPVWSVSWSLTGNLLAVADANN-VTLWK 285
+ I + EGR+L + P V++S TG+ A ++ V +WK
Sbjct: 254 LKIL------DLLEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQVMVWK 300
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 117 (46.2 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 39/125 (31%), Positives = 55/125 (44%)
Query: 8 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPK 67
+GHE V+ G LA+A D I + + + ATLKGH G V ++ +
Sbjct: 63 SGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNY-ATLKGHSGAVMELHYNTD- 120
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLAC-GSSDG 126
GS+L S S D V +W + + H S VNS P G L C GS DG
Sbjct: 121 -GSMLFSASTDKTVAVW---DSETGERVKRLKGHTSFVNSCY--PARRGPQLVCTGSDDG 174
Query: 127 NISVF 131
+ ++
Sbjct: 175 TVKLW 179
Score = 79 (32.9 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 37/137 (27%), Positives = 56/137 (40%)
Query: 42 NSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDH 101
+S + L GH G V+ + HP GS LAS +D +++W D T H
Sbjct: 53 SSLQAPIMLLSGHEGEVYCCKF-HPN-GSTLASAGFDRLILLWNV--YGDCDNYATLKGH 108
Query: 102 KSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAM 161
+V + + G L S+D ++V+ + + G R+ + H V S PA
Sbjct: 109 SGAVMELHYNTD--GSMLFSASTDKTVAVWDS--ETGERVKRL-KGHTSFVNSCY--PAR 161
Query: 162 APGALVGLGLLDPVQKL 178
LV G D KL
Sbjct: 162 RGPQLVCTGSDDGTVKL 178
Score = 78 (32.5 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 32/119 (26%), Positives = 55/119 (46%)
Query: 173 DPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASAS 232
D ++ S G DN +KVW + K+ ++ H+D V ++ L S + S +
Sbjct: 203 DTSDQIISGGIDNDIKVWDLRQN--KLTY--TMRGHADSVTGLS----LSSEGSYLLSNA 254
Query: 233 QDGTVVIWT----CAKEG--EQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLW 284
D TV +W KE + ++G V +F+ + SWS G+ +A A+ V +W
Sbjct: 255 MDNTVRVWDVRPFAPKERCVKIFQGNV-HNFEKNLLRCSWSPDGSKIAAGSADRFVYVW 312
Score = 69 (29.3 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 26/81 (32%), Positives = 39/81 (48%)
Query: 165 ALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQ--MHS---DWVRSVAWAP 219
++ GL L L S DNTV+VW + K C Q +H+ + +R +W+P
Sbjct: 237 SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC-SWSP 295
Query: 220 NLGLPKSTIASASQDGTVVIW 240
+ G S IA+ S D V +W
Sbjct: 296 D-G---SKIAAGSADRFVYVW 312
>ASPGD|ASPL0000069856 [details] [associations]
symbol:AN7205 species:162425 "Emericella nidulans"
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001304 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000036730 OMA:NRLMMLR
EnsemblFungi:CADANIAT00000249 Uniprot:C8VD17
Length = 492
Score = 153 (58.9 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 61/209 (29%), Positives = 90/209 (43%)
Query: 97 TFNDHKSSVNSIAWAP-HELGLSLACGSSDGNISVFTATADGGWDT-TRIDQAHPVGVTS 154
T HKS ++ W+P H LG L G +DG I V T T GGW T TR + H V
Sbjct: 250 TLRMHKSEGYALDWSPLHPLG-KLLTGDNDGLIYVTTRTEGGGWVTDTRAFRGHASSVEE 308
Query: 155 VSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQM---HSDW 211
+ W+P + AS D TVKVW + + PA+ + ++D
Sbjct: 309 LQWSP-------------NEKNVFASASSDGTVKVWDVRS----KSRSPAVNVKISNTD- 350
Query: 212 VRSVAWAPNLGLPKSTIASASQDGTVVIWTCA--KEGEQWEGRV----LKDF---KTPVW 262
V + W+ +A+ + DG +W K + + F K P+
Sbjct: 351 VNVMTWSKQTS---HLLATGADDGQWAVWDLRHWKPNPSSSAPITASPVASFNFHKEPIT 407
Query: 263 SVSWSLTGN-LLAVADANN-VTLWKEAVD 289
S+ W T + ++AV A+N VTLW AV+
Sbjct: 408 SIEWHPTDDSVIAVGSADNTVTLWDLAVE 436
Score = 152 (58.6 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 55/219 (25%), Positives = 93/219 (42%)
Query: 40 LSNSASQHLATLKGHRGPVWQVAWA--HPKFGSILASCSYDGQVIIWKEGNQNDW-TQAH 96
L SAS+ L+TL+ H+ + + W+ HP G +L + DG + + W T
Sbjct: 240 LPPSASKPLSTLRMHKSEGYALDWSPLHP-LGKLLTGDN-DGLIYVTTRTEGGGWVTDTR 297
Query: 97 TFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVS 156
F H SSV + W+P+E + A SSDG + V+ + + ++ V ++
Sbjct: 298 AFRGHASSVEELQWSPNEKNV-FASASSDGTVKVWDVRSKSRSPAVNVKISN-TDVNVMT 355
Query: 157 WAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMY-NGIWKMDCFP--ALQMHSDWVR 213
W+ + L+ G D + ++ WK + + P + H + +
Sbjct: 356 WSKQTSH--LLATGADDGQWAVWD------LRHWKPNPSSSAPITASPVASFNFHKEPIT 407
Query: 214 SVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGR 252
S+ W P S IA S D TV +W A E ++ E R
Sbjct: 408 SIEWHPT---DDSVIAVGSADNTVTLWDLAVELDEEESR 443
>RGD|620575 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEP] [GO:0001843 "neural tube closure" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006309 "apoptotic DNA fragmentation" evidence=ISO] [GO:0006917
"induction of apoptosis" evidence=IDA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0007420 "brain development" evidence=ISO;IEP] [GO:0007568
"aging" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008635 "activation of cysteine-type
endopeptidase activity involved in apoptotic process by cytochrome
c" evidence=ISO] [GO:0010659 "cardiac muscle cell apoptotic
process" evidence=IMP] [GO:0010952 "positive regulation of
peptidase activity" evidence=ISO] [GO:0016505 "apoptotic protease
activator activity" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEP] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0031072 "heat shock protein binding"
evidence=IPI] [GO:0034349 "glial cell apoptotic process"
evidence=IEP] [GO:0042802 "identical protein binding"
evidence=ISO;IDA] [GO:0043293 "apoptosome" evidence=ISO;IDA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IDA] [GO:0051402 "neuron apoptotic
process" evidence=ISO] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IDA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 RGD:620575 GO:GO:0005524 GO:GO:0007420 GO:GO:0030154
GO:GO:0006952 GO:GO:0006917 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0071560 GO:GO:0007568
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0001666 GO:GO:0007584 GO:GO:0043531 GO:GO:0042802
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293
CTD:317 HOVERGEN:HBG018730 KO:K02084 InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:AF320222 IPI:IPI00324110 RefSeq:NP_076469.1
UniGene:Rn.64522 ProteinModelPortal:Q9EPV5 SMR:Q9EPV5
MINT:MINT-3370020 STRING:Q9EPV5 PRIDE:Q9EPV5 GeneID:78963
KEGG:rno:78963 UCSC:RGD:620575 InParanoid:Q9EPV5 NextBio:614396
Genevestigator:Q9EPV5 GermOnline:ENSRNOG00000008022 GO:GO:0010659
GO:GO:0034349 Uniprot:Q9EPV5
Length = 1249
Score = 121 (47.7 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 32/122 (26%), Positives = 55/122 (45%)
Query: 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFG 69
H D V+ G+R+A+ +D ++++ + L +K H V A++
Sbjct: 614 HTDAVYHACFSQDGQRIASCGADKTLQVF--KAETGEKLLDIKAHEDEVLCCAFSSDD-- 669
Query: 70 SILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNIS 129
S +A+CS D +V IW G HT+ +H VN + L LA GS+D +
Sbjct: 670 SYIATCSVDKKVKIWDSGTGK---LVHTYEEHSEQVNCCHFTNKSNHLLLATGSNDSFLK 726
Query: 130 VF 131
++
Sbjct: 727 LW 728
Score = 85 (35.0 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 36/116 (31%), Positives = 50/116 (43%)
Query: 177 KLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGT 236
+L S D TVKVW + G + D F H V S A + + +S S D T
Sbjct: 1057 RLLSWSFDGTVKVWNVITGRIERD-FTC---HQGTVLSCA----ISSDATKFSSTSADKT 1108
Query: 237 VVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGE 291
IW+ E LK + V ++SL G LLA D N + +W + DG+
Sbjct: 1109 AKIWSFELPSPLHE---LKGHNSCVRCSAFSLDGILLATGDDNGEIRIWNVS-DGQ 1160
Score = 70 (29.7 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 32/116 (27%), Positives = 53/116 (45%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
LA+ D+ +K+W + N + +C + H++ V ++P+ L +AS S DGT+
Sbjct: 716 LATGSNDSFLKLWDL-N---QKECRNTMFGHTNSVTHCRFSPDDEL----LASCSADGTL 767
Query: 238 VIWTCAKEGEQWEGRVLKDF---KTPVWSV-------SWSLTGNLLAVADANNVTL 283
+W E+ V + F + P V SWS G+ + VA N V L
Sbjct: 768 KLWDVRSANEKKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDRIIVAAKNKVLL 823
Score = 65 (27.9 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 187 VKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAK 244
V++W + + + DC + H WV V ++P+ G S+ +AS D T+ +W K
Sbjct: 864 VELWNIDSRVKVADC----RGHLSWVHGVMFSPD-G---SSFLTASDDQTIRVWETRK 913
Score = 63 (27.2 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 23/80 (28%), Positives = 35/80 (43%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
L S D+ ++VW W+ + + LQ H + V+ L S + S S DGTV
Sbjct: 1018 LISSSEDSVIQVWN-----WQTEEYVFLQAHQETVKDFRL-----LRDSRLLSWSFDGTV 1067
Query: 238 VIWTCAKEGEQWEGRVLKDF 257
+W GR+ +DF
Sbjct: 1068 KVWNVIT------GRIERDF 1081
Score = 50 (22.7 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 15/51 (29%), Positives = 24/51 (47%)
Query: 227 TIASASQDGTVVIWTCAKEGE---QWEGRVLKDFKTPVWS--VSWSLTGNL 272
T+ S+S+D + +W E Q +KDF+ S +SWS G +
Sbjct: 1017 TLISSSEDSVIQVWNWQTEEYVFLQAHQETVKDFRLLRDSRLLSWSFDGTV 1067
Score = 50 (22.7 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 18/84 (21%), Positives = 36/84 (42%)
Query: 164 GALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGL 223
G ++ + K +S D T K+W L+ H+ VR A++ + G+
Sbjct: 1086 GTVLSCAISSDATKFSSTSADKTAKIWSFE----LPSPLHELKGHNSCVRCSAFSLD-GI 1140
Query: 224 PKSTIASASQDGTVVIWTCAKEGE 247
+A+ +G + IW + +G+
Sbjct: 1141 ---LLATGDDNGEIRIWNVS-DGQ 1160
Score = 49 (22.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 13/49 (26%), Positives = 25/49 (51%)
Query: 178 LASCGCDN-TVKVWKMYNGIWKMDCFP-ALQ----MHSDWVRSVAWAPN 220
L + G DN +++W + +G C P +++ H WV V ++P+
Sbjct: 1141 LLATGDDNGEIRIWNVSDGQLLHLCAPISIEEGTATHGGWVTDVCFSPD 1189
>FB|FBgn0022288 [details] [associations]
symbol:l(2)09851 "lethal (2) 09851" species:7227 "Drosophila
melanogaster" [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE013599 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
KO:K14848 OMA:NRLMMLR EMBL:AY071477 EMBL:AY128462
RefSeq:NP_610182.3 UniGene:Dm.1493 UniGene:Dm.36762 SMR:Q8SYL1
IntAct:Q8SYL1 STRING:Q8SYL1 EnsemblMetazoa:FBtr0086043 GeneID:46662
KEGG:dme:Dmel_CG12792 UCSC:CG12792-RA FlyBase:FBgn0022288
InParanoid:Q8SYL1 OrthoDB:EOG441NSN GenomeRNAi:46662 NextBio:838859
Uniprot:Q8SYL1
Length = 456
Score = 152 (58.6 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 56/219 (25%), Positives = 86/219 (39%)
Query: 85 KEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRI 144
K+ Q++ TF H+ +I W+P G+ LA G +I V+T DG W +
Sbjct: 205 KQYEQSEARPVFTFGGHQQEGFAIDWSPSADGV-LATGDCRRDIHVWTPVEDGTWKVDQR 263
Query: 145 DQA-HPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFP 203
A H V + W+P + LASC D T+++W K
Sbjct: 264 PLAGHSQSVEDLQWSP-------------NERSVLASCSVDKTIRIWDCRASPQKACMLT 310
Query: 204 ALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWS 263
H V ++W N + IAS DG + IW + + K + +
Sbjct: 311 CEDAHQSDVNVISWNRN----EPFIASGGDDGYLHIWDLRQFQSKKPIATFKHHTDHITT 366
Query: 264 VSWS-LTGNLLAVA-DANNVTLWKEAVDGEWQQVSVVEP 300
V WS +LA D + + LW AV+ + Q V+P
Sbjct: 367 VEWSPAEATVLASGGDDDQIALWDLAVEKDIDQA--VDP 403
>DICTYBASE|DDB_G0276423 [details] [associations]
symbol:hira "histone cell cycle regulation defective
homolog A" species:44689 "Dictyostelium discoideum" [GO:0016568
"chromatin modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0003714 "transcription corepressor
activity" evidence=ISS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007110 InterPro:IPR011494 InterPro:IPR015943
InterPro:IPR019015 Pfam:PF00400 Pfam:PF07569 Pfam:PF09453
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0276423 GO:GO:0005634 GO:GO:0003714
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GenomeReviews:CM000151_GR
GO:GO:0006357 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
EMBL:AAFI02000015 KO:K11293 RefSeq:XP_643117.1
ProteinModelPortal:Q86HX1 STRING:Q86HX1 EnsemblProtists:DDB0233325
GeneID:8620522 KEGG:ddi:DDB_G0276423 OMA:DIHPDES
ProtClustDB:CLSZ2497234 Uniprot:Q86HX1
Length = 1114
Score = 157 (60.3 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 46/140 (32%), Positives = 71/140 (50%)
Query: 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSAS------QH---LATLKGHRG 56
IE H +V+ V GK LA+ S D I GLSN+ S ++ +ATL+GH
Sbjct: 63 IENAHFHSVNSVKWSKDGKYLASGSDDKLCMIWGLSNNNSLLKNTTENWVCVATLRGHAS 122
Query: 57 PVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELG 116
+ +V+W+ P +A+CS+D +IIW+ N + +HK V + W P LG
Sbjct: 123 DISEVSWS-PD-NKYIATCSFDKSIIIWET---NKFQMVSKLEEHKGFVKGLTWDP--LG 175
Query: 117 LSLACGSSDGNISVFTATAD 136
LA S D ++ ++ T+D
Sbjct: 176 RYLASQSEDKSLIIWR-TSD 194
>ZFIN|ZDB-GENE-020419-34 [details] [associations]
symbol:dtl "denticleless homolog (Drosophila)"
species:7955 "Danio rerio" [GO:0007095 "mitotic G2 DNA damage
checkpoint" evidence=IMP] [GO:0006513 "protein monoubiquitination"
evidence=ISS] [GO:0005813 "centrosome" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=IEA;ISS] [GO:0031465
"Cul4B-RING ubiquitin ligase complex" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0000209 "protein
polyubiquitination" evidence=ISS] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0009411 "response to UV"
evidence=ISS] [GO:0031464 "Cul4A-RING ubiquitin ligase complex"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 ZFIN:ZDB-GENE-020419-34 GO:GO:0005634
GO:GO:0005737 GO:GO:0005813 GO:GO:0007095 GO:GO:0009411
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006511 GO:GO:0000209 GO:GO:0006513
GO:GO:0031464 GO:GO:0031465 GO:GO:0019985 HOVERGEN:HBG057737
KO:K11790 CTD:51514 GeneTree:ENSGT00530000064210
HOGENOM:HOG000112290 OrthoDB:EOG4N5VWH EMBL:AF506212 EMBL:BX511163
EMBL:BX510324 EMBL:BC045316 IPI:IPI00505024 RefSeq:NP_775348.1
UniGene:Dr.3526 ProteinModelPortal:Q5RHI5 STRING:Q5RHI5
Ensembl:ENSDART00000034098 GeneID:192314 KEGG:dre:192314
InParanoid:Q5RHI5 OMA:HENAVFD NextBio:20797151 Bgee:Q5RHI5
Uniprot:Q5RHI5
Length = 647
Score = 120 (47.3 bits), Expect = 0.00029, P = 0.00029
Identities = 45/181 (24%), Positives = 75/181 (41%)
Query: 17 VAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCS 76
+++D+ G RL + +D +I + +S + +A GH + V LAS S
Sbjct: 272 LSLDYTGSRLFSNCTDDNIYMFNISGLKTTPVAVFSGHSNSSFYVKSTVSPDDQFLASGS 331
Query: 77 YDGQVIIWKEGNQNDWTQAHTF-NDHKSSVNSIAWAPHELGLSLACGSSDGNISVF---- 131
D V IWK +D QA H V S+AW P + +C S D + ++
Sbjct: 332 SDHNVYIWKI---SDPKQAPMMLQGHSQEVTSVAWCPTDFTKIASC-SDDNTVRIWRLNR 387
Query: 132 ------TATADG---GWDTTRIDQAH--PVGVTSVSWAPAMAPGALVGLGLLDPVQKLAS 180
+ DG GW ++ + P + V P+ PG++ + L P + A+
Sbjct: 388 KPEGENSTIQDGNLVGWTIRKVQSPNRTPGHHSPVELTPSKNPGSVRSVSLASP--QPAT 445
Query: 181 C 181
C
Sbjct: 446 C 446
Score = 104 (41.7 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 40/126 (31%), Positives = 54/126 (42%)
Query: 176 QKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDG 235
Q LAS D+ V +WK+ + LQ HS V SVAW P K IAS S D
Sbjct: 325 QFLASGSSDHNVYIWKISD---PKQAPMMLQGHSQEVTSVAWCPT-DFTK--IASCSDDN 378
Query: 236 TVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANNVTLWKEAVDGEWQQV 295
TV IW ++ E E ++D W++ + N + V L G + V
Sbjct: 379 TVRIWRLNRKPEG-ENSTIQDGNLVGWTIRKVQSPNRTP-GHHSPVELTPSKNPGSVRSV 436
Query: 296 SVVEPQ 301
S+ PQ
Sbjct: 437 SLASPQ 442
Score = 96 (38.9 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 46/180 (25%), Positives = 72/180 (40%)
Query: 26 LATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWK 85
LA A+ + + I S L + H V+ +AW P + L + S D +W
Sbjct: 68 LAVANEEGFVTIFNTGEKQSSVLKEWQAHDNAVFDIAWV-PGT-NCLVTASGDQTARLW- 124
Query: 86 EGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATA---DGGW-DT 141
+ D TF H+ S+ S+A+ E + + G DGNI ++ DG +
Sbjct: 125 DVITGDLLG--TFKGHQCSLKSVAFYKQEKAV-FSTGGRDGNIMIWDTRCSKKDGFYRQV 181
Query: 142 TRIDQAH--PVGVT-SVSWAPAMAP------GALVGLGLLDPVQKLASCGCDNTVKVWKM 192
+I AH P T MAP G V L D + ++S D +K+W +
Sbjct: 182 KQISGAHMKPERFTPQTKKRRGMAPPVDSQQGVTVVL-FCDETKLISSGAVDGIIKMWDL 240
Score = 71 (30.1 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 20/75 (26%), Positives = 38/75 (50%)
Query: 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFG 69
H++ V D+A L TAS D + ++ + L T KGH+ + VA+ + +
Sbjct: 96 HDNAVFDIAWVPGTNCLVTASGDQTARLWDVITG--DLLGTFKGHQCSLKSVAF-YKQEK 152
Query: 70 SILASCSYDGQVIIW 84
++ ++ DG ++IW
Sbjct: 153 AVFSTGGRDGNIMIW 167
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 117 (46.2 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 39/125 (31%), Positives = 55/125 (44%)
Query: 8 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPK 67
+GHE V+ G LA+A D I + + + ATLKGH G V ++ +
Sbjct: 64 SGHEGEVYCCKFHPNGSTLASAGFDRLILLWSVYGDCDNY-ATLKGHSGAVMELHYNTD- 121
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLAC-GSSDG 126
GS+L S S D V +W + + H S VNS P G L C GS DG
Sbjct: 122 -GSMLFSASTDKTVAVW---DSETGERVKRLKGHTSFVNSCY--PARRGPQLVCTGSDDG 175
Query: 127 NISVF 131
+ ++
Sbjct: 176 TVKLW 180
Score = 74 (31.1 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 30/114 (26%), Positives = 53/114 (46%)
Query: 173 DPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASAS 232
D ++ S G DN +KVW + K+ ++ H+D V ++ L S + S +
Sbjct: 204 DTSDQIISGGIDNDIKVWDLRQN--KLTY--TMRGHADSVTGLS----LSSEGSYLLSNA 255
Query: 233 QDGTVVIWT----CAKEG--EQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN 280
D TV +W KE + ++G V +F+ + SWS G+ +A A++
Sbjct: 256 MDNTVRVWDVRPFAPKERCVKIFQGNV-HNFEKNLLRCSWSPDGSKIAAGSADS 308
Score = 62 (26.9 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 25/81 (30%), Positives = 38/81 (46%)
Query: 165 ALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQ--MHS---DWVRSVAWAP 219
++ GL L L S DNTV+VW + K C Q +H+ + +R +W+P
Sbjct: 238 SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC-SWSP 296
Query: 220 NLGLPKSTIASASQDGTVVIW 240
+ G S IA+ S D + W
Sbjct: 297 D-G---SKIAAGSADSFLYPW 313
>POMBASE|SPBC21B10.05c [details] [associations]
symbol:pop3 "WD repeat protein Pop3" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0000226 "microtubule cytoskeleton
organization" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006397 "mRNA processing" evidence=IMP]
[GO:0031929 "TOR signaling cascade" evidence=TAS] [GO:0031931
"TORC1 complex" evidence=IDA] [GO:0031932 "TORC2 complex"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC21B10.05c GO:GO:0005829 GO:GO:0005634
GO:GO:0000226 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0031929 EMBL:CU329671 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GenomeReviews:CU329671_GR GO:GO:0000070 GO:GO:0031931 GO:GO:0031932
KO:K08266 HOGENOM:HOG000208395 OMA:NNKGNCY OrthoDB:EOG4GF6PT
EMBL:AB016895 PIR:T39922 RefSeq:NP_595682.1
ProteinModelPortal:O74184 IntAct:O74184 STRING:O74184
EnsemblFungi:SPBC21B10.05c.1 GeneID:2540645 KEGG:spo:SPBC21B10.05c
NextBio:20801769 Uniprot:O74184
Length = 314
Score = 107 (42.7 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 39/131 (29%), Positives = 58/131 (44%)
Query: 1 MPAQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQ 60
MP E GH + V +A GK LAT+S D ++K+ + + Q H+ PV
Sbjct: 74 MPLMTFE-GHTNNVTAIAFHCDGKWLATSSEDGTVKVWDMRAPSVQRNYD---HKSPVND 129
Query: 61 VAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLA 120
+ HP G +L SC G+V W G +N T + ++SI G L
Sbjct: 130 LL-IHPNQGELL-SCDQSGRVRAWDLG-ENSCTH-ELIPEEDVPMSSITVGSD--GSMLI 183
Query: 121 CGSSDGNISVF 131
G++ GN V+
Sbjct: 184 AGNNKGNCYVW 194
Score = 96 (38.9 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 30/101 (29%), Positives = 50/101 (49%)
Query: 24 KRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVII 83
K+ A+ + +++ ++ S+ L T +GH V +A+ H G LA+ S DG V +
Sbjct: 52 KKFLAAAGNPHVRLYDINTSSQMPLMTFEGHTNNVTAIAF-HCD-GKWLATSSEDGTVKV 109
Query: 84 WKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSS 124
W + Q + DHKS VN + P++ G L+C S
Sbjct: 110 WDMRAPS--VQRNY--DHKSPVNDLLIHPNQ-GELLSCDQS 145
Score = 82 (33.9 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 29/106 (27%), Positives = 46/106 (43%)
Query: 189 VWKMYN--GIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEG 246
VW+M N G + Q H ++ +P++ +A+ S D TV IW+
Sbjct: 193 VWRMLNHQGASLLQPVVKFQAHQRYITRCVLSPDV----KHLATCSADATVNIWSTEDMS 248
Query: 247 EQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANNVT-LWKEAVDGE 291
E R L+ + VW ++S L A +++V LW E GE
Sbjct: 249 FMLERR-LQGHQRWVWDCAFSADSTYLVTASSDHVARLW-ELSSGE 292
>WB|WBGene00012479 [details] [associations]
symbol:Y18D10A.9 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009792 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0000003 GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT
GeneTree:ENSGT00700000104486 EMBL:AL034393 PIR:T26531
RefSeq:NP_493247.2 ProteinModelPortal:Q9XW12 SMR:Q9XW12
IntAct:Q9XW12 STRING:Q9XW12 PaxDb:Q9XW12 EnsemblMetazoa:Y18D10A.9
GeneID:173152 KEGG:cel:CELE_Y18D10A.9 UCSC:Y18D10A.9 CTD:173152
WormBase:Y18D10A.9 InParanoid:Q9XW12 NextBio:878489 Uniprot:Q9XW12
Length = 337
Score = 147 (56.8 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 42/153 (27%), Positives = 69/153 (45%)
Query: 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAH 65
++ H V VA GK L +AS D+S+ + + + L+GH V ++
Sbjct: 62 LDDSHTRAVRSVAFSNDGKCLVSASFDASVVVYQQEDGEFAEVNKLEGHESEVKCAVFS- 120
Query: 66 PKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD 125
K LA+CS D V W++ D++ + H V +AW P E L ++C S D
Sbjct: 121 -KSDEFLATCSRDKSVWFWQQDEDEDFSVSSILQPHTQDVKQVAWHPTE-DLLVSC-SYD 177
Query: 126 GNISVFTATADGGWDTT-RIDQAHPVGVTSVSW 157
+I + + W T +ID H V S+++
Sbjct: 178 SSIRFYRFDGED-WVTQQKIDGCHVGTVWSIAF 209
Score = 136 (52.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 68/242 (28%), Positives = 100/242 (41%)
Query: 5 KIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLAT-LKGHRGPVWQVAW 63
K+E GHE V + LAT S D S+ +++ L+ H V QVAW
Sbjct: 106 KLE-GHESEVKCAVFSKSDEFLATCSRDKSVWFWQQDEDEDFSVSSILQPHTQDVKQVAW 164
Query: 64 AHPKFGSILASCSYDGQVIIWKEGNQNDW-TQAHTFNDHKSSVNSIAWAPHELGLSLACG 122
HP +L SCSYD + ++ + DW TQ H +V SIA+ G L
Sbjct: 165 -HPT-EDLLVSCSYDSSIRFYRFDGE-DWVTQQKIDGCHVGTVWSIAFDTE--GHRLVTV 219
Query: 123 SSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCG 182
D I +F G + DQ V P V + V +A+ G
Sbjct: 220 GEDHCIQLFVRENIG---SKSADQDTWKSVARYDVENTRWPLYSVAWNSTNDV--IATGG 274
Query: 183 CDNTVKVWKMYNGIWK--MDCFPALQMHSDWVRSVAWAPNLGLPK--STIASASQDGTVV 238
D ++++K+ + ++ + H V VAW PN PK + + SAS DGT+
Sbjct: 275 GDCKIRLFKISSTPESPVIEHLGVVGRHELDVNHVAWNPN---PKFSNLLTSASDDGTIR 331
Query: 239 IW 240
+W
Sbjct: 332 LW 333
Score = 123 (48.4 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 39/130 (30%), Positives = 68/130 (52%)
Query: 178 LASCGCDNTVKVWKMY---NGIWKMDCFPALQ-MHSDWVRSVAWAPNLGLPKSTIASASQ 233
LASCG D V+VW + + +++C L H+ VRSVA++ N G + SAS
Sbjct: 32 LASCGDDKAVRVWSLVGEPDSKMRLECRTTLDDSHTRAVRSVAFS-NDG---KCLVSASF 87
Query: 234 DGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGEW 292
D +VV++ ++GE E L+ ++ V +S + LA + +V W++ D ++
Sbjct: 88 DASVVVYQ-QEDGEFAEVNKLEGHESEVKCAVFSKSDEFLATCSRDKSVWFWQQDEDEDF 146
Query: 293 QQVSVVEPQT 302
S+++P T
Sbjct: 147 SVSSILQPHT 156
>UNIPROTKB|Q9XW12 [details] [associations]
symbol:Y18D10A.9 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1 homolog" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI] [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003 GO:GO:0016226
HOGENOM:HOG000208901 OMA:SWKCVCT GeneTree:ENSGT00700000104486
EMBL:AL034393 PIR:T26531 RefSeq:NP_493247.2
ProteinModelPortal:Q9XW12 SMR:Q9XW12 IntAct:Q9XW12 STRING:Q9XW12
PaxDb:Q9XW12 EnsemblMetazoa:Y18D10A.9 GeneID:173152
KEGG:cel:CELE_Y18D10A.9 UCSC:Y18D10A.9 CTD:173152
WormBase:Y18D10A.9 InParanoid:Q9XW12 NextBio:878489 Uniprot:Q9XW12
Length = 337
Score = 147 (56.8 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 42/153 (27%), Positives = 69/153 (45%)
Query: 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAH 65
++ H V VA GK L +AS D+S+ + + + L+GH V ++
Sbjct: 62 LDDSHTRAVRSVAFSNDGKCLVSASFDASVVVYQQEDGEFAEVNKLEGHESEVKCAVFS- 120
Query: 66 PKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD 125
K LA+CS D V W++ D++ + H V +AW P E L ++C S D
Sbjct: 121 -KSDEFLATCSRDKSVWFWQQDEDEDFSVSSILQPHTQDVKQVAWHPTE-DLLVSC-SYD 177
Query: 126 GNISVFTATADGGWDTT-RIDQAHPVGVTSVSW 157
+I + + W T +ID H V S+++
Sbjct: 178 SSIRFYRFDGED-WVTQQKIDGCHVGTVWSIAF 209
Score = 136 (52.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 68/242 (28%), Positives = 100/242 (41%)
Query: 5 KIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLAT-LKGHRGPVWQVAW 63
K+E GHE V + LAT S D S+ +++ L+ H V QVAW
Sbjct: 106 KLE-GHESEVKCAVFSKSDEFLATCSRDKSVWFWQQDEDEDFSVSSILQPHTQDVKQVAW 164
Query: 64 AHPKFGSILASCSYDGQVIIWKEGNQNDW-TQAHTFNDHKSSVNSIAWAPHELGLSLACG 122
HP +L SCSYD + ++ + DW TQ H +V SIA+ G L
Sbjct: 165 -HPT-EDLLVSCSYDSSIRFYRFDGE-DWVTQQKIDGCHVGTVWSIAFDTE--GHRLVTV 219
Query: 123 SSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCG 182
D I +F G + DQ V P V + V +A+ G
Sbjct: 220 GEDHCIQLFVRENIG---SKSADQDTWKSVARYDVENTRWPLYSVAWNSTNDV--IATGG 274
Query: 183 CDNTVKVWKMYNGIWK--MDCFPALQMHSDWVRSVAWAPNLGLPK--STIASASQDGTVV 238
D ++++K+ + ++ + H V VAW PN PK + + SAS DGT+
Sbjct: 275 GDCKIRLFKISSTPESPVIEHLGVVGRHELDVNHVAWNPN---PKFSNLLTSASDDGTIR 331
Query: 239 IW 240
+W
Sbjct: 332 LW 333
Score = 123 (48.4 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 39/130 (30%), Positives = 68/130 (52%)
Query: 178 LASCGCDNTVKVWKMY---NGIWKMDCFPALQ-MHSDWVRSVAWAPNLGLPKSTIASASQ 233
LASCG D V+VW + + +++C L H+ VRSVA++ N G + SAS
Sbjct: 32 LASCGDDKAVRVWSLVGEPDSKMRLECRTTLDDSHTRAVRSVAFS-NDG---KCLVSASF 87
Query: 234 DGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGEW 292
D +VV++ ++GE E L+ ++ V +S + LA + +V W++ D ++
Sbjct: 88 DASVVVYQ-QEDGEFAEVNKLEGHESEVKCAVFSKSDEFLATCSRDKSVWFWQQDEDEDF 146
Query: 293 QQVSVVEPQT 302
S+++P T
Sbjct: 147 SVSSILQPHT 156
>MGI|MGI:2384863 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0032040
"small-subunit processome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2384863 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
HSSP:P63005 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR OMA:HHFRGSP EMBL:AK081966 EMBL:AK137554
EMBL:AK149940 EMBL:AK165125 EMBL:BC019504 IPI:IPI00124057
RefSeq:NP_663371.2 UniGene:Mm.100353 ProteinModelPortal:Q8C4J7
SMR:Q8C4J7 STRING:Q8C4J7 PhosphoSite:Q8C4J7 PaxDb:Q8C4J7
PRIDE:Q8C4J7 Ensembl:ENSMUST00000126319 GeneID:213773
KEGG:mmu:213773 UCSC:uc008axv.1 GeneTree:ENSGT00690000102183
InParanoid:Q8C4J7 NextBio:374097 Bgee:Q8C4J7 Genevestigator:Q8C4J7
Uniprot:Q8C4J7
Length = 801
Score = 131 (51.2 bits), Expect = 8.8e-08, Sum P(2) = 8.8e-08
Identities = 39/132 (29%), Positives = 62/132 (46%)
Query: 1 MPAQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQ 60
+ AQ H+ ++ +A+ K LAT S D + K+ L Q L GHR +W
Sbjct: 469 LQAQTTRRCHDKDINSLAVSPNDKLLATGSQDRTAKLWALPQC--QLLGVFTGHRRGLWN 526
Query: 61 VAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLA 120
V ++ P +LA+ S DG + +W D++ TF H +SV +A+ G L
Sbjct: 527 VQFS-PT-DQVLATASADGTIKLWA---LQDFSCLKTFEGHDASVLKVAFVSR--GSQLL 579
Query: 121 CGSSDGNISVFT 132
SDG + ++T
Sbjct: 580 SSGSDGLLKLWT 591
Score = 66 (28.3 bits), Expect = 8.8e-08, Sum P(2) = 8.8e-08
Identities = 18/80 (22%), Positives = 32/80 (40%)
Query: 177 KLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGT 236
+L S G D +K+W + + +C L H D V W + + D
Sbjct: 577 QLLSSGSDGLLKLWTIKSN----ECVRTLDAHEDKV----WGLHCSQLDDHAITGGSDSR 628
Query: 237 VVIWTCAKEGEQWEGRVLKD 256
+++W E EQ E + ++
Sbjct: 629 IILWKDVTEAEQAEEQAKRE 648
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 115 (45.5 bits), Expect = 0.00059, P = 0.00059
Identities = 28/76 (36%), Positives = 45/76 (59%)
Query: 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFG 69
H V+ ++ G L TASSD ++KI+ L + + TL+GH GPV+ V+++ K G
Sbjct: 185 HSGGVNCISFHPSGNYLITASSDGTLKILDLLEG--RLIYTLQGHTGPVFTVSFS--KGG 240
Query: 70 SILASCSYDGQVIIWK 85
+ AS D QV++W+
Sbjct: 241 ELFASGGADTQVLLWR 256
Score = 102 (41.0 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 39/116 (33%), Positives = 60/116 (51%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
+AS G D TVKVW + + K+ Q+HS V +++ P+ G + + +AS DGT+
Sbjct: 159 IASAGSDQTVKVWDVR--VNKL--LQHYQVHSGGVNCISFHPS-G---NYLITASSDGTL 210
Query: 238 VIWTCAKEGEQWEGRV---LKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVD 289
I + EGR+ L+ PV++VS+S G L A A+ V LW+ D
Sbjct: 211 KIL------DLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTNFD 260
Score = 90 (36.7 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 32/126 (25%), Positives = 57/126 (45%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH+D V V +G LA+AS D ++++ + + + + K H PV V ++
Sbjct: 16 GHKDVVTSVQFSPHGNLLASASRDRTVRL-WIPDKRGK-FSEFKAHTAPVRSVDFSAD-- 71
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
G LA+ S D + +W Q ++ H V ++P + L ++C S D I
Sbjct: 72 GQFLATASEDKSIKVWSMYRQRF---LYSLYRHTHWVRCAKFSP-DGRLIVSC-SEDKTI 126
Query: 129 SVFTAT 134
++ T
Sbjct: 127 KIWDTT 132
Score = 59 (25.8 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 20/77 (25%), Positives = 35/77 (45%)
Query: 82 IIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDT 141
++W N +A+ + HK V S+ ++PH G LA S D + ++ G +
Sbjct: 1 MLW---NFKPHARAYRYVGHKDVVTSVQFSPH--GNLLASASRDRTVRLWIPDKRGKFSE 55
Query: 142 TRIDQAHPVGVTSVSWA 158
+ AH V SV ++
Sbjct: 56 FK---AHTAPVRSVDFS 69
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 114 (45.2 bits), Expect = 0.00087, P = 0.00087
Identities = 28/76 (36%), Positives = 44/76 (57%)
Query: 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFG 69
H V+ V+ G L TASSD ++KI+ L + + TL+GH GPV+ V+++ K G
Sbjct: 227 HSGGVNCVSFHPSGNYLITASSDGTLKILDLLEG--RLIYTLQGHTGPVFTVSFS--KGG 282
Query: 70 SILASCSYDGQVIIWK 85
+ S D QV++W+
Sbjct: 283 ELFTSGGADAQVLLWR 298
Score = 99 (39.9 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 38/116 (32%), Positives = 60/116 (51%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
+AS G D+TVK+W + + K+ Q+HS V V++ P+ G + + +AS DGT+
Sbjct: 201 IASAGSDHTVKIWDIR--VNKL--LQHYQVHSGGVNCVSFHPS-G---NYLITASSDGTL 252
Query: 238 VIWTCAKEGEQWEGRV---LKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVD 289
I + EGR+ L+ PV++VS+S G L A+ V LW+ D
Sbjct: 253 KIL------DLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQVLLWRTNFD 302
Score = 98 (39.6 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 36/123 (29%), Positives = 56/123 (45%)
Query: 176 QKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDG 235
Q LAS D ++KVW MY + +L H+ WVR ++P+ L I S S+D
Sbjct: 115 QFLASASEDKSIKVWNMY----RQRFLYSLYRHTHWVRCAKFSPDGRL----IVSCSEDK 166
Query: 236 TVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQ 294
T+ IW + Q DF V+++ G +A A +++ V +W V+ Q
Sbjct: 167 TIKIWDTTNK--QCVNN-FSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQH 223
Query: 295 VSV 297
V
Sbjct: 224 YQV 226
Score = 94 (38.1 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 34/123 (27%), Positives = 57/123 (46%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH+ + V GK+LAT S D+ + + L A GH+ + V ++ P
Sbjct: 16 GHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYV--GHKDVITSVQFS-P-L 71
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
G++LAS S D + +W + ++ F H + V S+ ++ G LA S D +I
Sbjct: 72 GNLLASASRDRTIRLWIPDKRG---KSSEFKAHTAPVRSVDFSAD--GQFLASASEDKSI 126
Query: 129 SVF 131
V+
Sbjct: 127 KVW 129
Score = 89 (36.4 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 33/126 (26%), Positives = 56/126 (44%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH+D + V G LA+AS D +I++ + + + + K H PV V ++
Sbjct: 58 GHKDVITSVQFSPLGNLLASASRDRTIRL-WIPDKRGKS-SEFKAHTAPVRSVDFSAD-- 113
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
G LAS S D + +W Q ++ H V ++P + L ++C S D I
Sbjct: 114 GQFLASASEDKSIKVWNMYRQRF---LYSLYRHTHWVRCAKFSP-DGRLIVSC-SEDKTI 168
Query: 129 SVFTAT 134
++ T
Sbjct: 169 KIWDTT 174
>UNIPROTKB|F1Q065 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AAEX03004635 Ensembl:ENSCAFT00000030902 Uniprot:F1Q065
Length = 803
Score = 126 (49.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 38/132 (28%), Positives = 62/132 (46%)
Query: 1 MPAQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQ 60
+ AQ + H+ ++ VA+ K LAT S D + K+ L + Q L GHR +W
Sbjct: 466 LQAQATQRCHDKDINSVAVAPNDKLLATGSQDRTAKLWALPHC--QLLGIFSGHRRGLWC 523
Query: 61 VAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLA 120
V ++ P +LA+ S DG + +W D++ TF H +SV + + L
Sbjct: 524 VQFS-P-MDQVLATASADGTIKLWA---LQDFSCLKTFEGHDASVLKVVFVSRGTQLLSR 578
Query: 121 CGSSDGNISVFT 132
SDG + ++T
Sbjct: 579 PSGSDGLVKLWT 590
Score = 69 (29.3 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 19/75 (25%), Positives = 30/75 (40%)
Query: 182 GCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWT 241
G D VK+W + N +C L H D V W + + + D V++W
Sbjct: 581 GSDGLVKLWTIKNN----ECVKTLDAHEDKV----WGLHCSRLDDRALTGASDSCVILWK 632
Query: 242 CAKEGEQWEGRVLKD 256
E EQ E + ++
Sbjct: 633 DVTEEEQSEEQARRE 647
>FB|FBgn0046222 [details] [associations]
symbol:CG1109 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:Q04724
GeneTree:ENSGT00540000070914 KO:K15542 EMBL:AY051695
RefSeq:NP_730982.1 RefSeq:NP_730983.1 UniGene:Dm.4508 SMR:Q9VNG2
STRING:Q9VNG2 EnsemblMetazoa:FBtr0078713 EnsemblMetazoa:FBtr0078714
GeneID:40698 KEGG:dme:Dmel_CG1109 UCSC:CG1109-RA
FlyBase:FBgn0046222 InParanoid:Q9VNG2 OMA:TLRIWDF OrthoDB:EOG49ZW47
GenomeRNAi:40698 NextBio:820117 Uniprot:Q9VNG2
Length = 807
Score = 150 (57.9 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 39/128 (30%), Positives = 59/128 (46%)
Query: 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFG 69
H+ TV D+ + G L TAS D +K+ + N + + +GH+ V+W HP
Sbjct: 314 HKSTVMDLKWNDNGNWLVTASRDHLLKLFDIRN-LREEVQVFRGHKKEASSVSW-HPIHE 371
Query: 70 SILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNIS 129
+ S DG ++ W G + T +D S V ++AW H LG L GS+D I
Sbjct: 372 GLFCSGGSDGSILFWNVGTDKEIGCVETAHD--SIVWTLAW--HPLGHILCSGSNDHTIK 427
Query: 130 VFTATADG 137
+T G
Sbjct: 428 FWTRNRPG 435
Score = 106 (42.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 36/156 (23%), Positives = 67/156 (42%)
Query: 5 KIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWA 64
K+ H++ + ++ + + S D +++I + + L+GH V V W
Sbjct: 223 KMYQAHKEAIRGISFSPTDSKFVSGSDDGTLRIWDFMRCQEERV--LRGHGADVKCVHW- 279
Query: 65 HPKFGSILASCSYDGQVI-IWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGS 123
HP+ G I++ + Q I IW + T + HKS+V + W ++ G L S
Sbjct: 280 HPQKGMIVSGSKDNQQPIKIW---DPKSGIALATLHAHKSTVMDLKW--NDNGNWLVTAS 334
Query: 124 SDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAP 159
D + +F + ++ + H +SVSW P
Sbjct: 335 RDHLLKLFDIR--NLREEVQVFRGHKKEASSVSWHP 368
Score = 89 (36.4 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 33/138 (23%), Positives = 57/138 (41%)
Query: 23 GKRLATASSDSSIKIIGLSNSASQHLAT-LKGHRGPVWQVAWAHPKFGSILASCSYDGQV 81
G+RL T +S L N + + T L+ H V + W+H S + + + G V
Sbjct: 158 GRRLVTGASSGEFT---LWNGLTFNFETILQAHDISVRTMVWSHND--SWMVTGDHGGYV 212
Query: 82 IIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDT 141
W + N N+ + HK ++ I+++P + GS DG + ++
Sbjct: 213 KYW-QSNMNN---VKMYQAHKEAIRGISFSPTDS--KFVSGSDDGTLRIWDFMR---CQE 263
Query: 142 TRIDQAHPVGVTSVSWAP 159
R+ + H V V W P
Sbjct: 264 ERVLRGHGADVKCVHWHP 281
Score = 76 (31.8 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 24/115 (20%), Positives = 50/115 (43%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
L + D+ +K++ + N ++ F H SV+W P + + S DG++
Sbjct: 330 LVTASRDHLLKLFDIRNLREEVQVFRG---HKKEASSVSWHP---IHEGLFCSGGSDGSI 383
Query: 238 VIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAV-ADANNVTLWKEAVDGE 291
+ W + E G V + VW+++W G++L ++ + + W G+
Sbjct: 384 LFWNVGTDKEI--GCVETAHDSIVWTLAWHPLGHILCSGSNDHTIKFWTRNRPGD 436
Score = 61 (26.5 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 22/77 (28%), Positives = 34/77 (44%)
Query: 174 PVQKLASC--GCDNTVKVWKMYNGIWK-MDCFPALQMHSDWVRSVAWAPNLGLPKSTIAS 230
P+ + C G D ++ W + G K + C H V ++AW P LG + S
Sbjct: 368 PIHEGLFCSGGSDGSILFWNV--GTDKEIGCVETA--HDSIVWTLAWHP-LG---HILCS 419
Query: 231 ASQDGTVVIWTCAKEGE 247
S D T+ WT + G+
Sbjct: 420 GSNDHTIKFWTRNRPGD 436
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 118 (46.6 bits), Expect = 0.00035, P = 0.00035
Identities = 36/112 (32%), Positives = 53/112 (47%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAP-NL---GLPKSTIASASQ 233
+A+ DNTV++W G L+ H W+ S+AW P +L G P+ +ASAS+
Sbjct: 206 IATGSMDNTVRIWDAKKG---QALGAPLKGHVKWITSLAWEPYHLQQSGHPR--LASASK 260
Query: 234 DGTVVIW-TCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANNVTLW 284
D TV IW +K + VL K V V W TG + + + +W
Sbjct: 261 DSTVRIWDVISKRADI----VLSGHKGSVTCVRWGGTGKIYTSSHDRTIKVW 308
Score = 114 (45.2 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 46/174 (26%), Positives = 70/174 (40%)
Query: 26 LATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWK 85
+ + S DS+ +I H TLKGH W +A ++ G+++A+ S D V IW
Sbjct: 164 MVSGSGDSTARIWDCDTGTPLH--TLKGHTS--WVLAVSYSPNGAMIATGSMDNTVRIW- 218
Query: 86 EGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLS----LACGSSDGNISVFTATADGGWDT 141
+ + A H + S+AW P+ L S LA S D + ++ + D
Sbjct: 219 DAKKGQALGA-PLKGHVKWITSLAWEPYHLQQSGHPRLASASKDSTVRIWDVISKRA-DI 276
Query: 142 TRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNG 195
+ H VT V W G G K+ + D T+KVW G
Sbjct: 277 --VLSGHKGSVTCVRWG---------GTG------KIYTSSHDRTIKVWNSQTG 313
Score = 84 (34.6 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 43/156 (27%), Positives = 62/156 (39%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAW----- 63
GH V V+ G +AT S D++++I + A LKGH + +AW
Sbjct: 189 GHTSWVLAVSYSPNGAMIATGSMDNTVRIWDAKKGQALG-APLKGHVKWITSLAWEPYHL 247
Query: 64 ---AHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLA 120
HP+ LAS S D V IW ++ + HK SV + W G +
Sbjct: 248 QQSGHPR----LASASKDSTVRIWDVISKR---ADIVLSGHKGSVTCVRWGG--TG-KIY 297
Query: 121 CGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVS 156
S D I V+ + G T AH V ++S
Sbjct: 298 TSSHDRTIKVWNSQT-GTLIQTLSAHAHRVNHLALS 332
Score = 77 (32.2 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 28/109 (25%), Positives = 50/109 (45%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
+AS G DN VK+W +G + L+ H V ++ + L + S+S+D T+
Sbjct: 420 IASAGFDNHVKLWNGRDGKF----ITTLRGHVGAVYQCCFSADSRL----LVSSSKDTTL 471
Query: 238 VIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWK 285
+W + G+ E L K V++V WS G + + + +W+
Sbjct: 472 KVWN-VRTGKLSED--LPGHKDEVFAVDWSPDGQKVGSGGKDKAIRIWR 517
Score = 54 (24.1 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 28/109 (25%), Positives = 47/109 (43%)
Query: 175 VQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQD 234
V+KL S D T+ +W + + L H V V ++P++ IASA D
Sbjct: 374 VEKLVSASDDFTMYLWDPESSSKPV---ARLLGHQKEVNHVTFSPDMAY----IASAGFD 426
Query: 235 GTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANNVTL 283
V +W ++G+ L+ V+ +S LL V+ + + TL
Sbjct: 427 NHVKLWN-GRDGKFIT--TLRGHVGAVYQCCFSADSRLL-VSSSKDTTL 471
Score = 41 (19.5 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 228 IASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKE 286
+ SAS D T+ +W + + R+L K V V++S +A A +N V LW
Sbjct: 377 LVSASDDFTMYLWD-PESSSKPVARLLGHQKE-VNHVTFSPDMAYIASAGFDNHVKLWNG 434
Query: 287 AVDGEW 292
DG++
Sbjct: 435 R-DGKF 439
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 128 (50.1 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 44/123 (35%), Positives = 62/123 (50%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
LAS D TV++W G + L+ HS+WVRSVA++P+ L +AS S D TV
Sbjct: 752 LASGSFDKTVRLWDPATGSLQQ----TLRGHSNWVRSVAFSPDGRL----LASGSFDKTV 803
Query: 238 VIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVS 296
+W A Q + L+ V SV++S G LLA + V LW A G QQ
Sbjct: 804 RLWDPATGSLQ---QTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWDPAT-GTLQQTL 859
Query: 297 VVE 299
+++
Sbjct: 860 IIK 862
Score = 125 (49.1 bits), Expect = 0.00013, P = 0.00013
Identities = 48/153 (31%), Positives = 75/153 (49%)
Query: 26 LATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWK 85
LA+ S D ++++ + + Q TL+GH G V VA++ P G +LAS S+D V +W
Sbjct: 710 LASGSDDETVRLWDPATGSLQQ--TLEGHSGWVLSVAFS-PD-GRLLASGSFDKTVRLWD 765
Query: 86 EGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRID 145
+ Q T H + V S+A++P G LA GS D + ++ A G T
Sbjct: 766 PATGS--LQ-QTLRGHSNWVRSVAFSPD--GRLLASGSFDKTVRLWDP-ATGSLQQTL-- 817
Query: 146 QAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKL 178
+ H V SV+++P G L+ G D +L
Sbjct: 818 RGHSDTVRSVAFSP---DGRLLASGSFDKTVRL 847
Score = 123 (48.4 bits), Expect = 0.00022, P = 0.00022
Identities = 42/128 (32%), Positives = 65/128 (50%)
Query: 4 QKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAW 63
Q +E GH V VA G+ LA+ S D ++++ + + Q TL+GH V VA+
Sbjct: 731 QTLE-GHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQ--TLRGHSNWVRSVAF 787
Query: 64 AHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGS 123
+ P G +LAS S+D V +W + Q T H +V S+A++P G LA GS
Sbjct: 788 S-PD-GRLLASGSFDKTVRLWDPATGS--LQ-QTLRGHSDTVRSVAFSPD--GRLLASGS 840
Query: 124 SDGNISVF 131
D + ++
Sbjct: 841 FDKTVRLW 848
Score = 68 (29.0 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 26/84 (30%), Positives = 37/84 (44%)
Query: 48 LATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNS 107
L TL+GH VW ++LAS S D V +W + T H V S
Sbjct: 696 LQTLEGHSNSVW----------AVLASGSDDETVRLWDPATGS---LQQTLEGHSGWVLS 742
Query: 108 IAWAPHELGLSLACGSSDGNISVF 131
+A++P G LA GS D + ++
Sbjct: 743 VAFSPD--GRLLASGSFDKTVRLW 764
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 148 (57.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 40/125 (32%), Positives = 63/125 (50%)
Query: 3 AQKIET--GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQ 60
+Q I T GH+ TV V + G + +ASSD +K+ + + + T KGH V
Sbjct: 283 SQNITTLHGHKSTVSKVEWNQNGNWIVSASSDQLLKVFDIRTM--KEMQTFKGHGKEVTA 340
Query: 61 VAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLA 120
+A HP + S DG+++ W GN + H+ +D + V S++W H +G LA
Sbjct: 341 LA-LHPYHEDLFVSGDKDGKILYWIVGNPEPQAEIHSAHD--ADVWSLSW--HPIGHILA 395
Query: 121 CGSSD 125
GS+D
Sbjct: 396 SGSND 400
>UNIPROTKB|F1P3E7 [details] [associations]
symbol:WDR26 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 OMA:IRGQFYQ EMBL:AADN02012163 EMBL:AADN02012164
EMBL:AADN02012165 IPI:IPI00585040 Ensembl:ENSGALT00000015154
Uniprot:F1P3E7
Length = 684
Score = 116 (45.9 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 34/110 (30%), Positives = 55/110 (50%)
Query: 51 LKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWK-EGNQNDWTQAHTFNDHKSSVNSIA 109
L H VW +++ G+ LA+ S D VIIW+ + + + T H V+ IA
Sbjct: 374 LTEHCNEVWFCKFSND--GTKLATGSKDTTVIIWQVDPDTHQLKLLKTLEGHAYGVSYIA 431
Query: 110 WAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAP 159
W+P + L +ACG D + ++ G T++ Q+H +TSV+W P
Sbjct: 432 WSPDDNYL-VACGPDDCS-ELWLWNVQTGELRTKMSQSHEDSLTSVAWNP 479
Score = 103 (41.3 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 33/111 (29%), Positives = 50/111 (45%)
Query: 4 QKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQH--LATLKGHRGPVWQV 61
Q+I T H + V G +LAT S D+++ I + Q L TL+GH V +
Sbjct: 371 QQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHQLKLLKTLEGHAYGVSYI 430
Query: 62 AWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAP 112
AW+ P + L +C D +W Q + H+ S+ S+AW P
Sbjct: 431 AWS-PD-DNYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNP 479
Score = 77 (32.2 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 23/53 (43%), Positives = 30/53 (56%)
Query: 191 KMYNGIW-KMDCFPALQM--HSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW 240
K+Y IW K P ++ H+ V V+W P + P S +ASAS DGTV IW
Sbjct: 617 KVY--IWHKRSELPIAELTGHTRTVNCVSWNPQI--P-SMMASASDDGTVRIW 664
Score = 52 (23.4 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 21/68 (30%), Positives = 31/68 (45%)
Query: 228 IASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWS--LTGNLLAVADANNVTLWK 285
IAS S+D V IW K E + +T V VSW+ + + + +D V +W
Sbjct: 609 IASGSEDHKVYIWH--KRSELPIAELTGHTRT-VNCVSWNPQIPSMMASASDDGTVRIWG 665
Query: 286 EA--VDGE 291
A VD +
Sbjct: 666 PAPFVDNQ 673
>FB|FBgn0034937 [details] [associations]
symbol:fzr2 "fizzy-related 2" species:7227 "Drosophila
melanogaster" [GO:0007140 "male meiosis" evidence=IEP] [GO:0008054
"cyclin catabolic process" evidence=IGI] [GO:0010458 "exit from
mitosis" evidence=IEP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE013599 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0007140 GO:GO:0008054
KO:K03364 GeneTree:ENSGT00580000081606 OrthoDB:EOG4G79F4
EMBL:AY051537 RefSeq:NP_611854.1 UniGene:Dm.4571 SMR:Q9W1F6
STRING:Q9W1F6 EnsemblMetazoa:FBtr0072146 GeneID:37808
KEGG:dme:Dmel_CG16783 UCSC:CG16783-RA CTD:37808 FlyBase:FBgn0034937
InParanoid:Q9W1F6 OMA:QISNLAW GenomeRNAi:37808 NextBio:805507
Uniprot:Q9W1F6
Length = 451
Score = 145 (56.1 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 36/122 (29%), Positives = 63/122 (51%)
Query: 4 QKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAW 63
++I E + A+ + G RLA+ S D SI + N + L+GH+ V + W
Sbjct: 220 KQINRLEEHSARVTALAWCGNRLASGSRDRSILQRDIRNPPTHITRCLRGHKLEVCGLQW 279
Query: 64 AHPKFGSILASCSYDGQVIIWKEGNQNDWTQA-HTFNDHKSSVNSIAWAPHELGLSLACG 122
+ P LAS D ++++W + DW + + F++HK+ V ++ W+PH+ GL + G
Sbjct: 280 S-PS-NRYLASGGSDNRLLVWTD----DWPEPIYAFDEHKAVVKALGWSPHKSGLLASGG 333
Query: 123 SS 124
S
Sbjct: 334 GS 335
>UNIPROTKB|Q5JKX0 [details] [associations]
symbol:B1147A04.35 "cDNA clone:J013000B23, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0001700
"embryonic development via the syncytial blastoderm" evidence=ISS]
[GO:0005623 "cell" evidence=ISS] [GO:0009909 "regulation of flower
development" evidence=ISS;IDA] [GO:0031124 "mRNA 3'-end processing"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001700 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0005623 GO:GO:0009909
GO:GO:0031124 GO:GO:0080008 EMBL:AP003735 EMBL:AK111493
STRING:Q5JKX0 EnsemblPlants:LOC_Os01g72220.1 OMA:FACAISD
Uniprot:Q5JKX0
Length = 527
Score = 146 (56.5 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 46/166 (27%), Positives = 70/166 (42%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH++ V V + G + TAS D IK+ + + + L + +GH V +AW HP
Sbjct: 131 GHKNIVQCVKWNQNGNWVLTASKDQIIKLYDIRSM--KELESFRGHNKDVTALAW-HPFH 187
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
S SYDG + W G++ Q N H +SV +AW H +G L G +D
Sbjct: 188 EEYFVSGSYDGAIFHWLVGHETP--QIEINNAHDNSVWDLAW--HPVGYLLCSGGNDHAT 243
Query: 129 SVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDP 174
+ G + + G PA A A+ G + +P
Sbjct: 244 RFWCRNRPGDLTRDKYNSGQMQGYGDQH--PAFAGRAMGGFQMPEP 287
>RGD|1565589 [details] [associations]
symbol:Wdr26 "WD repeat domain 26" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1565589 Gene3D:2.130.10.10 SUPFAM:SSF50978
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 IPI:IPI00767527 PRIDE:F1LTR1
Ensembl:ENSRNOT00000005059 Uniprot:F1LTR1
Length = 622
Score = 114 (45.2 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 33/110 (30%), Positives = 55/110 (50%)
Query: 51 LKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWK-EGNQNDWTQAHTFNDHKSSVNSIA 109
L H VW +++ G+ LA+ S D VI+W+ + + + T H V+ IA
Sbjct: 312 LTEHCNEVWFCKFSND--GTKLATGSKDTTVIVWQVDADTHLLKLLKTLEGHAYGVSYIA 369
Query: 110 WAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAP 159
W+P + L +ACG D + ++ G T++ Q+H +TSV+W P
Sbjct: 370 WSPDDSYL-VACGPDDCS-ELWLWNVQTGELRTKMSQSHEDSLTSVAWNP 417
Score = 110 (43.8 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 39/147 (26%), Positives = 60/147 (40%)
Query: 4 QKIETGHEDTVHDVAMDFYGKRLATASSDSSIKI--IGLSNSASQHLATLKGHRGPVWQV 61
Q+I T H + V G +LAT S D+++ + + + L TL+GH V +
Sbjct: 309 QQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIVWQVDADTHLLKLLKTLEGHAYGVSYI 368
Query: 62 AWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLAC 121
AW+ P S L +C D +W Q + H+ S+ S+AW P G
Sbjct: 369 AWS-PD-DSYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPD--GKRFVT 424
Query: 122 GSSDGNISVFTATADGG----WDTTRI 144
G G + DG W+ R+
Sbjct: 425 GGQRGQF--YQCDLDGNLLDSWEGVRV 449
Score = 77 (32.2 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 23/53 (43%), Positives = 30/53 (56%)
Query: 191 KMYNGIW-KMDCFPALQM--HSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW 240
K+Y IW K P ++ H+ V V+W P + P S +ASAS DGTV IW
Sbjct: 555 KVY--IWHKRSELPIAELTGHTRTVNCVSWNPQI--P-SMMASASDDGTVRIW 602
Score = 51 (23.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 19/62 (30%), Positives = 28/62 (45%)
Query: 228 IASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWS--LTGNLLAVADANNVTLWK 285
IAS S+D V IW K E + +T V VSW+ + + + +D V +W
Sbjct: 547 IASGSEDHKVYIWH--KRSELPIAELTGHTRT-VNCVSWNPQIPSMMASASDDGTVRIWG 603
Query: 286 EA 287
A
Sbjct: 604 PA 605
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 120 (47.3 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 52/187 (27%), Positives = 78/187 (41%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
G DT+ +A+ K L +A I++ L + + KGH GPV +A H
Sbjct: 58 GESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKC--IRSWKGHEGPVMGMA-CHAS- 113
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
G +LA+ D +V++W + + H F HK V+SI + P L GS D +
Sbjct: 114 GGLLATAGADRKVLVW---DVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATV 170
Query: 129 SVFTATADGGWDTT-RIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTV 187
V+ A I + H VTS+ AL GL L S G D V
Sbjct: 171 RVWDLNAKNTEKKCLAIMEKHFSAVTSI---------ALSEDGLT-----LFSAGRDKVV 216
Query: 188 KVWKMYN 194
+W +++
Sbjct: 217 NLWDLHD 223
Score = 90 (36.7 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 37/142 (26%), Positives = 61/142 (42%)
Query: 1 MPAQKIETGHEDTVH--DVAMDFYGKRL-ATASSDSSIKIIGLSNSASQHLATLKGHRGP 57
M + GH++ V D + G L T S D ++++ ++ + + T GH G
Sbjct: 391 MSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGT--GHNGD 448
Query: 58 VWQVAWAHPKFGSILASCSYDGQVIIWK-EGNQNDWTQAHTFND------HKSSVNSIAW 110
+ VA+A F S S S D + +W +G D + H +NS+A
Sbjct: 449 ILAVAFAKKSF-SFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAV 507
Query: 111 APHELGLSLAC-GSSDGNISVF 131
A ++ SL C GS D S++
Sbjct: 508 ARND---SLVCTGSEDRTASIW 526
Score = 74 (31.1 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 17/64 (26%), Positives = 26/64 (40%)
Query: 177 KLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGT 236
+ SCG D +K+W + +C H D V WA +G IA+ D
Sbjct: 597 QFVSCGADGLLKLWNVNTS----ECIATYDQHEDKV----WALAVGKKTEMIATGGGDAV 648
Query: 237 VVIW 240
+ +W
Sbjct: 649 INLW 652
>UNIPROTKB|Q2TBM8 [details] [associations]
symbol:WDR26 "WD repeat domain 26" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 HOGENOM:HOG000160946 HOVERGEN:HBG083958 OMA:IRGQFYQ
OrthoDB:EOG4GHZNV CTD:80232 EMBL:DAAA02042638 EMBL:BC109897
IPI:IPI00702354 RefSeq:NP_001070527.1 UniGene:Bt.21955
Ensembl:ENSBTAT00000034200 GeneID:767999 KEGG:bta:767999
InParanoid:Q2TBM8 NextBio:20918354 Uniprot:Q2TBM8
Length = 514
Score = 112 (44.5 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 34/110 (30%), Positives = 53/110 (48%)
Query: 51 LKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQA-HTFNDHKSSVNSIA 109
L H VW +++ G+ LA+ S D VIIW+ + T H V+ IA
Sbjct: 204 LTEHCNEVWFCKFSND--GTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYIA 261
Query: 110 WAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAP 159
W+P + L +ACG D + ++ G T++ Q+H +TSV+W P
Sbjct: 262 WSPDDNYL-VACGPDDCS-ELWLWNVQTGELRTKMSQSHEDSLTSVAWNP 309
Score = 106 (42.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 39/147 (26%), Positives = 60/147 (40%)
Query: 4 QKIETGHEDTVHDVAMDFYGKRLATASSDSSIKI--IGLSNSASQHLATLKGHRGPVWQV 61
Q+I T H + V G +LAT S D+++ I + + L TL+GH V +
Sbjct: 201 QQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYI 260
Query: 62 AWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLAC 121
AW+ P + L +C D +W Q + H+ S+ S+AW P G
Sbjct: 261 AWS-PD-DNYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPD--GKRFVT 316
Query: 122 GSSDGNISVFTATADGG----WDTTRI 144
G G + DG W+ R+
Sbjct: 317 GGQRGQF--YQCDLDGNLLDSWEGVRV 341
Score = 77 (32.2 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 23/53 (43%), Positives = 30/53 (56%)
Query: 191 KMYNGIW-KMDCFPALQM--HSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW 240
K+Y IW K P ++ H+ V V+W P + P S +ASAS DGTV IW
Sbjct: 447 KVY--IWHKRSELPIAELTGHTRTVNCVSWNPQI--P-SMMASASDDGTVRIW 494
Score = 51 (23.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 19/62 (30%), Positives = 28/62 (45%)
Query: 228 IASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWS--LTGNLLAVADANNVTLWK 285
IAS S+D V IW K E + +T V VSW+ + + + +D V +W
Sbjct: 439 IASGSEDHKVYIWH--KRSELPIAELTGHTRT-VNCVSWNPQIPSMMASASDDGTVRIWG 495
Query: 286 EA 287
A
Sbjct: 496 PA 497
>UNIPROTKB|F1PIR1 [details] [associations]
symbol:WDR26 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 OMA:IRGQFYQ CTD:80232 EMBL:AAEX03005292
RefSeq:XP_003434930.1 ProteinModelPortal:F1PIR1
Ensembl:ENSCAFT00000025923 GeneID:480115 KEGG:cfa:480115
Uniprot:F1PIR1
Length = 514
Score = 112 (44.5 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 34/110 (30%), Positives = 53/110 (48%)
Query: 51 LKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQA-HTFNDHKSSVNSIA 109
L H VW +++ G+ LA+ S D VIIW+ + T H V+ IA
Sbjct: 204 LTEHCNEVWFCKFSND--GTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYIA 261
Query: 110 WAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAP 159
W+P + L +ACG D + ++ G T++ Q+H +TSV+W P
Sbjct: 262 WSPDDNYL-VACGPDDCS-ELWLWNVQTGELRTKMSQSHEDSLTSVAWNP 309
Score = 106 (42.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 39/147 (26%), Positives = 60/147 (40%)
Query: 4 QKIETGHEDTVHDVAMDFYGKRLATASSDSSIKI--IGLSNSASQHLATLKGHRGPVWQV 61
Q+I T H + V G +LAT S D+++ I + + L TL+GH V +
Sbjct: 201 QQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYI 260
Query: 62 AWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLAC 121
AW+ P + L +C D +W Q + H+ S+ S+AW P G
Sbjct: 261 AWS-PD-DNYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPD--GKRFVT 316
Query: 122 GSSDGNISVFTATADGG----WDTTRI 144
G G + DG W+ R+
Sbjct: 317 GGQRGQF--YQCDLDGNLLDSWEGVRV 341
Score = 77 (32.2 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 23/53 (43%), Positives = 30/53 (56%)
Query: 191 KMYNGIW-KMDCFPALQM--HSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW 240
K+Y IW K P ++ H+ V V+W P + P S +ASAS DGTV IW
Sbjct: 447 KVY--IWHKRSELPIAELTGHTRTVNCVSWNPQI--P-SMMASASDDGTVRIW 494
Score = 51 (23.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 19/62 (30%), Positives = 28/62 (45%)
Query: 228 IASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWS--LTGNLLAVADANNVTLWK 285
IAS S+D V IW K E + +T V VSW+ + + + +D V +W
Sbjct: 439 IASGSEDHKVYIWH--KRSELPIAELTGHTRT-VNCVSWNPQIPSMMASASDDGTVRIWG 495
Query: 286 EA 287
A
Sbjct: 496 PA 497
>POMBASE|SPAC29A4.18 [details] [associations]
symbol:prw1 "Clr6 histone deacetylase complex subunit
Prw1" species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0006342 "chromatin silencing"
evidence=ISO] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0030261 "chromosome condensation" evidence=IMP] [GO:0032221
"Rpd3S complex" evidence=IDA] [GO:0033698 "Rpd3L complex"
evidence=IDA] [GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC29A4.18 GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0000070 GO:GO:0006342 GO:GO:0030261 GO:GO:0033698
GO:GO:0070210 GO:GO:0016575 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0032221 HOGENOM:HOG000160330 PIR:T38471
RefSeq:NP_594864.1 ProteinModelPortal:O14021 DIP:DIP-29342N
IntAct:O14021 STRING:O14021 EnsemblFungi:SPAC29A4.18.1
GeneID:2541804 KEGG:spo:SPAC29A4.18 OMA:HISSHEK OrthoDB:EOG4MWCH4
NextBio:20802892 Uniprot:O14021
Length = 431
Score = 144 (55.7 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 50/199 (25%), Positives = 87/199 (43%)
Query: 8 TGHEDTVHDVAMDF-YGKRLATASSDSSIKI--IGLSNSASQHLATLKGHRGPVWQVAWA 64
+ HE V DV + + LA+ S D + + I +++++ ++ H GP+ VA+
Sbjct: 231 SSHEKQVSDVRFHYKHQDLLASVSYDQYLHVHDIRRPDASTKPARSVHAHSGPIHSVAF- 289
Query: 65 HPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSS 124
+P ILA+CS D + +W N N + HT H+ V I+++PHE + LA S+
Sbjct: 290 NPHNDFILATCSTDKTIALWDLRNLNQ--RLHTLEGHEDIVTKISFSPHEEPI-LASTSA 346
Query: 125 DGNISVFTATADGGWDTTRIDQAHPV-----GVTSVSWAPAMAPGALVGLGLLDPVQ-KL 178
D V WD +RI + P G + + + + +
Sbjct: 347 DRRTLV--------WDLSRIGEDQPAEEAQDGPPELLFMHGGHTSCTIDMDWCPNYNWTM 398
Query: 179 ASCGCDNTVKVWKMYNGIW 197
A+ DN +++W IW
Sbjct: 399 ATAAEDNILQIWTPSRSIW 417
>TAIR|locus:2159562 [details] [associations]
symbol:AT5G08560 "AT5G08560" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0007062 "sister chromatid
cohesion" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0009888 "tissue development" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010359 "regulation of anion channel activity"
evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0010638 "positive regulation of organelle
organization" evidence=RCA] [GO:0016926 "protein desumoylation"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006697
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 OMA:IRGQFYQ EMBL:AY054535 EMBL:AY064639
IPI:IPI00526669 RefSeq:NP_001078546.1 RefSeq:NP_196473.1
UniGene:At.20607 ProteinModelPortal:Q9FNN2 SMR:Q9FNN2 IntAct:Q9FNN2
PaxDb:Q9FNN2 PRIDE:Q9FNN2 EnsemblPlants:AT5G08560.1
EnsemblPlants:AT5G08560.2 GeneID:830756 KEGG:ath:AT5G08560
TAIR:At5g08560 InParanoid:Q9FNN2 PhylomeDB:Q9FNN2
ProtClustDB:CLSN2687467 Genevestigator:Q9FNN2 Uniprot:Q9FNN2
Length = 589
Score = 112 (44.5 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 43/171 (25%), Positives = 71/171 (41%)
Query: 1 MPAQKIETGHEDTVHDVAMD--FYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPV 58
+P +++E E+++H + D + L + S S G SQ L+ H V
Sbjct: 219 IPEKRLECLVENSLH-IQRDSCVFHNTLDSDLSLYSDHQCGKHQIPSQTAQILESHTDEV 277
Query: 59 WQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLS 118
W + ++H G LAS S D IIW+ + HT H V +I W+P + +
Sbjct: 278 WFLQFSHN--GKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWSPDDRQV- 334
Query: 119 LACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGL 169
L CG+ + + D G D + + + S W P G + G+
Sbjct: 335 LTCGAEE---VIRRWDVDSG-DCVHMYEKGGISPISCGWYPD-GQGIIAGM 380
Score = 78 (32.5 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 25/72 (34%), Positives = 37/72 (51%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAP-NLGLPKSTIASASQDGT 236
+AS D+ V +W G K+ L H+ V V+W+P NL + +ASAS DGT
Sbjct: 504 IASGSEDSQVYIWHRSTG--KL--IVELPGHAGAVNCVSWSPTNLHM----LASASDDGT 555
Query: 237 VVIWTCAKEGEQ 248
+ IW + +Q
Sbjct: 556 IRIWGLDRINQQ 567
Score = 56 (24.8 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 23/84 (27%), Positives = 42/84 (50%)
Query: 222 GLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKT---PVWSVSWSLTG-NLLAVA- 276
G ++ IAS S+D V IW + G+++ + V VSWS T ++LA A
Sbjct: 498 GYKQAFIASGSEDSQVYIW------HRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASAS 551
Query: 277 DANNVTLWK-EAVDGEWQQVSVVE 299
D + +W + ++ + Q+ +V+
Sbjct: 552 DDGTIRIWGLDRINQQNQKKKLVQ 575
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 137 (53.3 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 47/120 (39%), Positives = 60/120 (50%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHL--ATLKGHRGPVWQVAWAHP 66
GH D+V+ VA GK LA+ S D S+K+ LS S S+ AT GH+ V VA++ P
Sbjct: 455 GHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFS-P 513
Query: 67 KFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSL-ACGSSD 125
GS L S S D V W N T HK+SV S+A +P + A GS D
Sbjct: 514 D-GSWLISGSKDRSVQFWDPRNG---TTHMMLQGHKNSVISVALSPKNNSHGVFATGSGD 569
Score = 128 (50.1 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 48/154 (31%), Positives = 74/154 (48%)
Query: 7 ETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHP 66
E G ++ V VAM G+ +A S D+ +++ L +GH V+ VA++ P
Sbjct: 411 EVGPKNGVTSVAMSPDGRLVAAGSLDNIVRL--WDAQTGYFLERYEGHLDSVYSVAFS-P 467
Query: 67 KFGSILASCSYDGQVIIWK-EGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD 125
G LAS S D + +W G+++ TFN HK V S+A++P G L GS D
Sbjct: 468 D-GKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPD--GSWLISGSKD 524
Query: 126 GNISVFTATADGGWDTTRIDQAHPVGVTSVSWAP 159
++ F +G T + Q H V SV+ +P
Sbjct: 525 RSVQ-FWDPRNG--TTHMMLQGHKNSVISVALSP 555
Score = 105 (42.0 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 43/157 (27%), Positives = 71/157 (45%)
Query: 23 GKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVI 82
G LAT + D ++K+ + QH T GH ++ + ++ G + S S D +
Sbjct: 339 GNYLATGAEDKTVKVWDIHTKKIQH--TFYGHELDIYSLDYSSD--GRFIVSGSGDKKAK 394
Query: 83 IWK-EGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDT 141
IW E + +T + K+ V S+A +P G +A GS D + ++ A G+
Sbjct: 395 IWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPD--GRLVAAGSLDNIVRLWDAQT--GYFL 450
Query: 142 TRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKL 178
R + H V SV+++P G + G LD KL
Sbjct: 451 ERYE-GHLDSVYSVAFSP---DGKSLASGSLDKSLKL 483
Score = 85 (35.0 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 33/114 (28%), Positives = 52/114 (45%)
Query: 176 QKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDG 235
+ LAS D ++K+W + + C H D+V SVA++P+ G S + S S+D
Sbjct: 470 KSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPD-G---SWLISGSKDR 525
Query: 236 TVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGN---LLAVADAN-NVTLWK 285
+V W + G +L+ K V SV+ S N + A + LWK
Sbjct: 526 SVQFWD-PRNGTTH--MMLQGHKNSVISVALSPKNNSHGVFATGSGDFRSRLWK 576
>RGD|1306419 [details] [associations]
symbol:Elp2 "elongator acetyltransferase complex subunit 2"
species:10116 "Rattus norvegicus" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0008023 "transcription elongation factor complex"
evidence=ISO] [GO:0010950 "positive regulation of endopeptidase
activity" evidence=ISS] [GO:0019901 "protein kinase binding"
evidence=IEA;ISO] [GO:0033588 "Elongator holoenzyme complex"
evidence=ISO;ISS] [GO:0043248 "proteasome assembly" evidence=ISS]
[GO:0046425 "regulation of JAK-STAT cascade" evidence=IEA;ISO]
[GO:0061133 "endopeptidase activator activity" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1306419 GO:GO:0005634
GO:GO:0005794 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR011047 SUPFAM:SSF50998
GO:GO:0000502 GO:GO:0061133 GO:GO:0043248 GO:GO:0006368
GO:GO:0046425 GO:GO:0033588 CTD:55250 GeneTree:ENSGT00390000000916
HOGENOM:HOG000200623 HOVERGEN:HBG087208 KO:K11374 OrthoDB:EOG40K7Z8
OMA:DCLIRIW EMBL:BC092606 EMBL:BC100661 IPI:IPI00358475
RefSeq:NP_001029317.1 RefSeq:XP_003751798.1 UniGene:Rn.25007
ProteinModelPortal:Q496Z0 STRING:Q496Z0 PhosphoSite:Q496Z0
PRIDE:Q496Z0 Ensembl:ENSRNOT00000020601 GeneID:307545
KEGG:rno:307545 UCSC:RGD:1306419 InParanoid:Q496Z0 NextBio:657555
Genevestigator:Q496Z0 GermOnline:ENSRNOG00000015301 Uniprot:Q496Z0
Length = 821
Score = 122 (48.0 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 47/176 (26%), Positives = 73/176 (41%)
Query: 26 LATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAH---PKFG---SILASCSYDG 79
L + +SD+ + L N+ L+GH GPV+ V + P G +++AS + D
Sbjct: 78 LVSGASDNRVIHWELENNQVLKSVRLQGHEGPVYAVHGIYQSGPSDGEQHALIASAASDS 137
Query: 80 QVIIW-KEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGG 138
V +W K+G++ Q F D ++ P LACG G I +F D
Sbjct: 138 TVRLWSKKGSEVKCLQILKFGDGFVLTVCLSTLPDTDAPVLACGDDGGRIHLFVQQDD-- 195
Query: 139 WDTTRIDQA-HPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMY 193
W + H + V WA G L LASC D +++W++Y
Sbjct: 196 WFQKMLSLCGHEDWIRGVEWAT-------FGRDLF-----LASCSQDCLIRIWRLY 239
Score = 70 (29.7 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 208 HSDWVRSVAWAPNL---GLPKSTIA--SASQDGTVVIWTCAKEGEQW 249
H +WV ++ W P+ G+ + SAS D T+++W +E W
Sbjct: 281 HENWVNAIHWQPSFYKDGVLHQPVRLLSASMDKTMILWAPDEESGVW 327
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 135 (52.6 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 54/200 (27%), Positives = 85/200 (42%)
Query: 49 ATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSI 108
+ + GH + A+A P S + + + D IW Q T HT H + V +
Sbjct: 137 SAIAGHGSTILCSAFA-PHTSSRMVTGAGDNTARIWDCDTQ---TPMHTLKGHYNWVLCV 192
Query: 109 AWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPA--MAPGAL 166
+W+P G +A GS D I ++ + G + H +TS+SW P + PG+
Sbjct: 193 SWSPD--GEVIATGSMDNTIRLWDPKS--GQCLGDALRGHSKWITSLSWEPIHLVKPGS- 247
Query: 167 VGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKS 226
P +LAS D T+K+W + + C + H++ V V W GL
Sbjct: 248 ------KP--RLASSSKDGTIKIWDTVSRV----CQYTMSGHTNSVSCVKWGGQ-GL--- 291
Query: 227 TIASASQDGTVVIWTCAKEG 246
+ S S D TV +W +G
Sbjct: 292 -LYSGSHDRTVRVWDINSQG 310
Score = 125 (49.1 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 34/111 (30%), Positives = 54/111 (48%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCF-PALQMHSDWVRSVAWAP-NLGLP--KSTIASASQ 233
+A+ DNT+++W +G C AL+ HS W+ S++W P +L P K +AS+S+
Sbjct: 201 IATGSMDNTIRLWDPKSG----QCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSK 256
Query: 234 DGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANNVTLW 284
DGT+ IW Q+ + V V W G L + + V +W
Sbjct: 257 DGTIKIWDTVSRVCQY---TMSGHTNSVSCVKWGGQGLLYSGSHDRTVRVW 304
Score = 125 (49.1 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 35/125 (28%), Positives = 60/125 (48%)
Query: 8 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPK 67
TGH+ V+ VA G+ + +AS D+SIK+ + ++T +GH V+QVAW+
Sbjct: 399 TGHQKLVNHVAFSPDGRYIVSASFDNSIKL--WDGRDGKFISTFRGHVASVYQVAWSSDC 456
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGN 127
+L SCS D + +W + + HK V ++ W+ G + G D
Sbjct: 457 --RLLVSCSKDTTLKVWDVRTRK---LSVDLPGHKDEVYTVDWSVD--GKRVCSGGKDKM 509
Query: 128 ISVFT 132
+ ++T
Sbjct: 510 VRLWT 514
Score = 110 (43.8 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 49/163 (30%), Positives = 75/163 (46%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLA-TLKGHRGPVWQVAWA--H 65
GH + V V+ G+ +AT S D++I++ + Q L L+GH + ++W H
Sbjct: 184 GHYNWVLCVSWSPDGEVIATGSMDNTIRL--WDPKSGQCLGDALRGHSKWITSLSWEPIH 241
Query: 66 -PKFGSI--LASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACG 122
K GS LAS S DG + IW ++ +T + H +SV+ + W GL L G
Sbjct: 242 LVKPGSKPRLASSSKDGTIKIWDTVSR---VCQYTMSGHTNSVSCVKWGGQ--GL-LYSG 295
Query: 123 SSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGA 165
S D + V+ + G AH V S+S A+ GA
Sbjct: 296 SHDRTVRVWDINSQGRCINILKSHAHWVNHLSLSTDYALRIGA 338
Score = 78 (32.5 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 28/108 (25%), Positives = 47/108 (43%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
+ S DN++K+W +G + + F H V VAW+ + L + S S+D T+
Sbjct: 417 IVSASFDNSIKLWDGRDGKF-ISTFRG---HVASVYQVAWSSDCRL----LVSCSKDTTL 468
Query: 238 VIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLW 284
+W + L K V++V WS+ G + + V LW
Sbjct: 469 KVWDVRTRKLSVD---LPGHKDEVYTVDWSVDGKRVCSGGKDKMVRLW 513
Score = 69 (29.3 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
L SC D T+KVW + +D P H D V +V W+ + G + S +D V
Sbjct: 459 LVSCSKDTTLKVWDVRTRKLSVD-LPG---HKDEVYTVDWSVD-G---KRVCSGGKDKMV 510
Query: 238 VIWT 241
+WT
Sbjct: 511 RLWT 514
Score = 45 (20.9 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 19/72 (26%), Positives = 34/72 (47%)
Query: 222 GLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN- 280
G + + +AS D T+ +W K + R+ K V V++S G + A +N
Sbjct: 368 GNSEEMMVTASDDYTMFLWNPLKSTKPI-ARMTGHQKL-VNHVAFSPDGRYIVSASFDNS 425
Query: 281 VTLWKEAVDGEW 292
+ LW + DG++
Sbjct: 426 IKLW-DGRDGKF 436
>UNIPROTKB|Q7QJ33 [details] [associations]
symbol:AGAP007244 "Ribosome biogenesis protein WDR12
homolog" species:7165 "Anopheles gambiae" [GO:0000463 "maturation
of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AAAB01008807 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_308556.3
ProteinModelPortal:Q7QJ33 STRING:Q7QJ33
EnsemblMetazoa:AGAP007244-RA GeneID:1269902
KEGG:aga:AgaP_AGAP007244 VectorBase:AGAP007244 CTD:1269902
PhylomeDB:Q7QJ33 Uniprot:Q7QJ33
Length = 428
Score = 143 (55.4 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 76/286 (26%), Positives = 128/286 (44%)
Query: 10 HEDTVHDV-AMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWA--HP 66
H+D V V A D + + T + D+++ L N+ +H T+ GH V VAW +
Sbjct: 110 HDDWVSAVQAKDGW---ILTGTYDNTVN---LWNTKGKHKLTIPGHVAAVKGVAWISLNE 163
Query: 67 KFGSILASCSYDGQVIIWKEGNQNDWTQ--AHTFNDHKSSVNSIAWAPHELGLSLACGSS 124
+ G + AS S+D ++IW E N T H H+ V IA P + +A GS
Sbjct: 164 QTG-VFASASHDQTIMIW-EWNMTTNTAECVHVCKGHERGVGCIAVNPAKT--QMASGSM 219
Query: 125 DGNISVFTAT--ADGGWDT-TRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASC 181
D + +++ AD G + T+ + V + A + G+ +D +A+C
Sbjct: 220 DTMLKIWSTELQADKGEPSATKKAKLEQDNVRTPVVTLAGHREFVSGVQWIDNTT-IATC 278
Query: 182 GCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWT 241
D+T+K+W + G K + F + D ++++P G+ I +AS D + ++
Sbjct: 279 SWDHTIKLWDLSMGGIKTE-FTGNKSFFD----LSYSPLNGM----IITASPDKNLRLYD 329
Query: 242 C-AKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADA--NNVTLW 284
+K G + L + V + WS T L V+ A N V LW
Sbjct: 330 PRSKHGNFVKNTYLGHSQW-VQTCRWSTTNEYLFVSGAYDNRVKLW 374
>MGI|MGI:1923825 [details] [associations]
symbol:Wdr26 "WD repeat domain 26" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
MGI:MGI:1923825 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 HOVERGEN:HBG083958 OMA:IRGQFYQ OrthoDB:EOG4GHZNV
CTD:80232 ChiTaRS:WDR26 EMBL:AC113084 EMBL:AK075743 EMBL:AK167116
EMBL:AK167017 EMBL:BC020044 EMBL:BC058601 IPI:IPI00226275
RefSeq:NP_663489.4 UniGene:Mm.289082 ProteinModelPortal:Q8C6G8
SMR:Q8C6G8 IntAct:Q8C6G8 STRING:Q8C6G8 PhosphoSite:Q8C6G8
PaxDb:Q8C6G8 PRIDE:Q8C6G8 Ensembl:ENSMUST00000162819 GeneID:226757
KEGG:mmu:226757 InParanoid:Q8C6G8 NextBio:378339 Bgee:Q8C6G8
CleanEx:MM_WDR26 Genevestigator:Q8C6G8
GermOnline:ENSMUSG00000038733 Uniprot:Q8C6G8
Length = 641
Score = 113 (44.8 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 34/110 (30%), Positives = 53/110 (48%)
Query: 51 LKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQA-HTFNDHKSSVNSIA 109
L H VW +++ G+ LA+ S D VIIW+ + T H V+ IA
Sbjct: 331 LTEHCNEVWFCKFSND--GTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYIA 388
Query: 110 WAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAP 159
W+P + L +ACG D + ++ G T++ Q+H +TSV+W P
Sbjct: 389 WSPDDSYL-VACGPDDCS-ELWLWNVQTGELRTKMSQSHEDSLTSVAWNP 436
Score = 109 (43.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 40/147 (27%), Positives = 60/147 (40%)
Query: 4 QKIETGHEDTVHDVAMDFYGKRLATASSDSSIKI--IGLSNSASQHLATLKGHRGPVWQV 61
Q+I T H + V G +LAT S D+++ I + + L TL+GH V +
Sbjct: 328 QQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYI 387
Query: 62 AWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLAC 121
AW+ P S L +C D +W Q + H+ S+ S+AW P G
Sbjct: 388 AWS-PD-DSYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPD--GKRFVT 443
Query: 122 GSSDGNISVFTATADGG----WDTTRI 144
G G + DG W+ R+
Sbjct: 444 GGQRGQF--YQCDLDGNLLDSWEGVRV 468
Score = 77 (32.2 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 23/53 (43%), Positives = 30/53 (56%)
Query: 191 KMYNGIW-KMDCFPALQM--HSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW 240
K+Y IW K P ++ H+ V V+W P + P S +ASAS DGTV IW
Sbjct: 574 KVY--IWHKRSELPIAELTGHTRTVNCVSWNPQI--P-SMMASASDDGTVRIW 621
Score = 51 (23.0 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 19/62 (30%), Positives = 28/62 (45%)
Query: 228 IASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWS--LTGNLLAVADANNVTLWK 285
IAS S+D V IW K E + +T V VSW+ + + + +D V +W
Sbjct: 566 IASGSEDHKVYIWH--KRSELPIAELTGHTRT-VNCVSWNPQIPSMMASASDDGTVRIWG 622
Query: 286 EA 287
A
Sbjct: 623 PA 624
>UNIPROTKB|E1BT84 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 OMA:TVMEVKL EMBL:AADN02024425
IPI:IPI00586005 ProteinModelPortal:E1BT84
Ensembl:ENSGALT00000003177 Uniprot:E1BT84
Length = 1323
Score = 149 (57.5 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 39/128 (30%), Positives = 59/128 (46%)
Query: 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFG 69
H++TV +V ++ G L TAS D K+ + N + L +GH+ VAW HP
Sbjct: 287 HKNTVMEVKLNLNGNWLLTASRDHLCKLFDIRN-LKEELQVFRGHKKEATAVAW-HPVHE 344
Query: 70 SILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNIS 129
+ AS DG ++ W G + + H+ + S+AW H LG L GS+D
Sbjct: 345 GLFASGGSDGSLLFWHVGVEKEVGGMEMA--HEGMIWSLAW--HPLGHILCSGSNDHTSK 400
Query: 130 VFTATADG 137
+T G
Sbjct: 401 FWTRNRPG 408
Score = 132 (51.5 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 72/298 (24%), Positives = 118/298 (39%)
Query: 23 GKRLATASSDSSIKIIGLSNSASQHLAT-LKGHRGPVWQVAWAHPKFGSILASCSYDGQV 81
G+RL T +S L N + + T L+ H PV + W+H + A + G V
Sbjct: 131 GRRLVTGASSGEFT---LWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD--HGGYV 185
Query: 82 IIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDT 141
W + N N+ F HK ++ +++P + + C S DG + ++
Sbjct: 186 KYW-QSNMNN---VKMFQAHKEAIREASFSPTDNKFA-TC-SDDGTVRIWDFLR---CHE 236
Query: 142 TRIDQAHPVGVTSVSWAPA---MAPGALVG---LGLLDPV--QKLASCGCD-NTVKVWKM 192
RI + H V V W P + G+ + DP Q LA+ NTV K+
Sbjct: 237 ERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKL 296
Query: 193 -YNGIWKMD------C--FPA------LQM---HSDWVRSVAWAPNLGLPKSTIASASQD 234
NG W + C F LQ+ H +VAW P + + AS D
Sbjct: 297 NLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHP---VHEGLFASGGSD 353
Query: 235 GTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANNVT-LWKEAVDGE 291
G+++ W E E G + + +WS++W G++L ++ + W G+
Sbjct: 354 GSLLFWHVGVEKEV--GGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGD 409
>UNIPROTKB|F1LT09 [details] [associations]
symbol:Wdr33 "Protein Wdr33" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1309230 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 IPI:IPI00189285 PRIDE:F1LT09
Ensembl:ENSRNOT00000017075 ArrayExpress:F1LT09 Uniprot:F1LT09
Length = 1327
Score = 149 (57.5 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 39/128 (30%), Positives = 59/128 (46%)
Query: 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFG 69
H++TV +V ++ G L TAS D K+ + N + L +GH+ VAW HP
Sbjct: 283 HKNTVMEVKLNLNGNWLLTASRDHLCKLFDIRN-LKEELQVFRGHKKEATAVAW-HPVHE 340
Query: 70 SILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNIS 129
+ AS DG ++ W G + + H+ + S+AW H LG L GS+D
Sbjct: 341 GLFASGGSDGSLLFWHVGVEKEVGGMEMA--HEGMIWSLAW--HPLGHILCSGSNDHTSK 396
Query: 130 VFTATADG 137
+T G
Sbjct: 397 FWTRNRPG 404
Score = 132 (51.5 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 72/298 (24%), Positives = 118/298 (39%)
Query: 23 GKRLATASSDSSIKIIGLSNSASQHLAT-LKGHRGPVWQVAWAHPKFGSILASCSYDGQV 81
G+RL T +S L N + + T L+ H PV + W+H + A + G V
Sbjct: 127 GRRLVTGASSGEFT---LWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD--HGGYV 181
Query: 82 IIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDT 141
W + N N+ F HK ++ +++P + + C S DG + ++
Sbjct: 182 KYW-QSNMNN---VKMFQAHKEAIREASFSPTDNKFA-TC-SDDGTVRIWDFLR---CHE 232
Query: 142 TRIDQAHPVGVTSVSWAPA---MAPGALVG---LGLLDPV--QKLASCGCD-NTVKVWKM 192
RI + H V V W P + G+ + DP Q LA+ NTV K+
Sbjct: 233 ERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKL 292
Query: 193 -YNGIWKMD------C--FPA------LQM---HSDWVRSVAWAPNLGLPKSTIASASQD 234
NG W + C F LQ+ H +VAW P + + AS D
Sbjct: 293 NLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHP---VHEGLFASGGSD 349
Query: 235 GTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANNVT-LWKEAVDGE 291
G+++ W E E G + + +WS++W G++L ++ + W G+
Sbjct: 350 GSLLFWHVGVEKEV--GGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGD 405
>MGI|MGI:1921570 [details] [associations]
symbol:Wdr33 "WD repeat domain 33" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005581
"collagen" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1921570 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0006397
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 HSSP:P16649
GeneTree:ENSGT00540000070914 KO:K15542 CTD:55339 OMA:TVMEVKL
ChiTaRS:WDR33 EMBL:AB086191 EMBL:AK031786 EMBL:AK050653
EMBL:AC124393 EMBL:AC131761 EMBL:AC161511 IPI:IPI00170242
RefSeq:NP_083142.2 UniGene:Mm.277705 ProteinModelPortal:Q8K4P0
SMR:Q8K4P0 PhosphoSite:Q8K4P0 PRIDE:Q8K4P0
Ensembl:ENSMUST00000025264 GeneID:74320 KEGG:mmu:74320
UCSC:uc008eis.2 HOGENOM:HOG000148601 HOVERGEN:HBG054623
InParanoid:Q8C7C6 NextBio:340445 Bgee:Q8K4P0 Genevestigator:Q8K4P0
Uniprot:Q8K4P0
Length = 1330
Score = 149 (57.5 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 39/128 (30%), Positives = 59/128 (46%)
Query: 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFG 69
H++TV +V ++ G L TAS D K+ + N + L +GH+ VAW HP
Sbjct: 287 HKNTVMEVKLNLNGNWLLTASRDHLCKLFDIRN-LKEELQVFRGHKKEATAVAW-HPVHE 344
Query: 70 SILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNIS 129
+ AS DG ++ W G + + H+ + S+AW H LG L GS+D
Sbjct: 345 GLFASGGSDGSLLFWHVGVEKEVGGMEMA--HEGMIWSLAW--HPLGHILCSGSNDHTSK 400
Query: 130 VFTATADG 137
+T G
Sbjct: 401 FWTRNRPG 408
Score = 132 (51.5 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 72/298 (24%), Positives = 118/298 (39%)
Query: 23 GKRLATASSDSSIKIIGLSNSASQHLAT-LKGHRGPVWQVAWAHPKFGSILASCSYDGQV 81
G+RL T +S L N + + T L+ H PV + W+H + A + G V
Sbjct: 131 GRRLVTGASSGEFT---LWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD--HGGYV 185
Query: 82 IIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDT 141
W + N N+ F HK ++ +++P + + C S DG + ++
Sbjct: 186 KYW-QSNMNN---VKMFQAHKEAIREASFSPTDNKFA-TC-SDDGTVRIWDFLR---CHE 236
Query: 142 TRIDQAHPVGVTSVSWAPA---MAPGALVG---LGLLDPV--QKLASCGCD-NTVKVWKM 192
RI + H V V W P + G+ + DP Q LA+ NTV K+
Sbjct: 237 ERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKL 296
Query: 193 -YNGIWKMD------C--FPA------LQM---HSDWVRSVAWAPNLGLPKSTIASASQD 234
NG W + C F LQ+ H +VAW P + + AS D
Sbjct: 297 NLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHP---VHEGLFASGGSD 353
Query: 235 GTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANNVT-LWKEAVDGE 291
G+++ W E E G + + +WS++W G++L ++ + W G+
Sbjct: 354 GSLLFWHVGVEKEV--GGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGD 409
>UNIPROTKB|E1BCT7 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 KO:K15542 CTD:55339 OMA:TVMEVKL
EMBL:DAAA02003882 EMBL:DAAA02003883 EMBL:DAAA02003884
IPI:IPI00689135 RefSeq:NP_001193007.1 UniGene:Bt.32571
ProteinModelPortal:E1BCT7 Ensembl:ENSBTAT00000007859 GeneID:541270
KEGG:bta:541270 NextBio:20879105 Uniprot:E1BCT7
Length = 1336
Score = 149 (57.5 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 39/128 (30%), Positives = 59/128 (46%)
Query: 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFG 69
H++TV +V ++ G L TAS D K+ + N + L +GH+ VAW HP
Sbjct: 287 HKNTVMEVKLNLNGNWLLTASRDHLCKLFDIRN-LKEELQVFRGHKKEATAVAW-HPVHE 344
Query: 70 SILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNIS 129
+ AS DG ++ W G + + H+ + S+AW H LG L GS+D
Sbjct: 345 GLFASGGSDGSLLFWHVGVEKEVGGMEMA--HEGMIWSLAW--HPLGHILCSGSNDHTSK 400
Query: 130 VFTATADG 137
+T G
Sbjct: 401 FWTRNRPG 408
Score = 132 (51.5 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 72/298 (24%), Positives = 118/298 (39%)
Query: 23 GKRLATASSDSSIKIIGLSNSASQHLAT-LKGHRGPVWQVAWAHPKFGSILASCSYDGQV 81
G+RL T +S L N + + T L+ H PV + W+H + A + G V
Sbjct: 131 GRRLVTGASSGEFT---LWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD--HGGYV 185
Query: 82 IIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDT 141
W + N N+ F HK ++ +++P + + C S DG + ++
Sbjct: 186 KYW-QSNMNN---VKMFQAHKEAIREASFSPTDNKFA-TC-SDDGTVRIWDFLR---CHE 236
Query: 142 TRIDQAHPVGVTSVSWAPA---MAPGALVG---LGLLDPV--QKLASCGCD-NTVKVWKM 192
RI + H V V W P + G+ + DP Q LA+ NTV K+
Sbjct: 237 ERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKL 296
Query: 193 -YNGIWKMD------C--FPA------LQM---HSDWVRSVAWAPNLGLPKSTIASASQD 234
NG W + C F LQ+ H +VAW P + + AS D
Sbjct: 297 NLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHP---VHEGLFASGGSD 353
Query: 235 GTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANNVT-LWKEAVDGE 291
G+++ W E E G + + +WS++W G++L ++ + W G+
Sbjct: 354 GSLLFWHVGVEKEV--GGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGD 409
>UNIPROTKB|F1PV59 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR008160
Pfam:PF01391 GeneTree:ENSGT00540000070914 KO:K15542 OMA:TVMEVKL
EMBL:AAEX03011835 RefSeq:XP_003639747.1 ProteinModelPortal:F1PV59
Ensembl:ENSCAFT00000006945 GeneID:100856093 KEGG:cfa:100856093
Uniprot:F1PV59
Length = 1336
Score = 149 (57.5 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 39/128 (30%), Positives = 59/128 (46%)
Query: 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFG 69
H++TV +V ++ G L TAS D K+ + N + L +GH+ VAW HP
Sbjct: 287 HKNTVMEVKLNLNGNWLLTASRDHLCKLFDIRN-LKEELQVFRGHKKEATAVAW-HPVHE 344
Query: 70 SILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNIS 129
+ AS DG ++ W G + + H+ + S+AW H LG L GS+D
Sbjct: 345 GLFASGGSDGSLLFWHVGVEKEVGGMEMA--HEGMIWSLAW--HPLGHILCSGSNDHTSK 400
Query: 130 VFTATADG 137
+T G
Sbjct: 401 FWTRNRPG 408
Score = 132 (51.5 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 72/298 (24%), Positives = 118/298 (39%)
Query: 23 GKRLATASSDSSIKIIGLSNSASQHLAT-LKGHRGPVWQVAWAHPKFGSILASCSYDGQV 81
G+RL T +S L N + + T L+ H PV + W+H + A + G V
Sbjct: 131 GRRLVTGASSGEFT---LWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD--HGGYV 185
Query: 82 IIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDT 141
W + N N+ F HK ++ +++P + + C S DG + ++
Sbjct: 186 KYW-QSNMNN---VKMFQAHKEAIREASFSPTDNKFA-TC-SDDGTVRIWDFLR---CHE 236
Query: 142 TRIDQAHPVGVTSVSWAPA---MAPGALVG---LGLLDPV--QKLASCGCD-NTVKVWKM 192
RI + H V V W P + G+ + DP Q LA+ NTV K+
Sbjct: 237 ERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKL 296
Query: 193 -YNGIWKMD------C--FPA------LQM---HSDWVRSVAWAPNLGLPKSTIASASQD 234
NG W + C F LQ+ H +VAW P + + AS D
Sbjct: 297 NLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHP---VHEGLFASGGSD 353
Query: 235 GTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANNVT-LWKEAVDGE 291
G+++ W E E G + + +WS++W G++L ++ + W G+
Sbjct: 354 GSLLFWHVGVEKEV--GGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGD 409
>UNIPROTKB|Q9C0J8 [details] [associations]
symbol:WDR33 "pre-mRNA 3' end processing protein WDR33"
species:9606 "Homo sapiens" [GO:0005581 "collagen" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006301 "postreplication repair" evidence=NAS]
[GO:0007283 "spermatogenesis" evidence=NAS] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397 GO:GO:0007283
EMBL:CH471103 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
GO:GO:0006301 KO:K15542 EMBL:AC006011 EMBL:AB044749 EMBL:AK002156
EMBL:AK223319 EMBL:BC005401 EMBL:BC013990 EMBL:BC068484
EMBL:AL834365 IPI:IPI00106567 IPI:IPI00385811 IPI:IPI00432450
RefSeq:NP_001006623.1 RefSeq:NP_001006624.1 RefSeq:NP_060853.3
UniGene:Hs.554831 ProteinModelPortal:Q9C0J8 SMR:Q9C0J8
IntAct:Q9C0J8 PhosphoSite:Q9C0J8 DMDM:209572695 PaxDb:Q9C0J8
PRIDE:Q9C0J8 Ensembl:ENST00000322313 Ensembl:ENST00000393006
Ensembl:ENST00000409658 GeneID:55339 KEGG:hsa:55339 UCSC:uc002tpg.2
UCSC:uc002tpi.2 CTD:55339 GeneCards:GC02M128458 HGNC:HGNC:25651
HPA:HPA026897 neXtProt:NX_Q9C0J8 PharmGKB:PA134943440
HOGENOM:HOG000126810 HOVERGEN:HBG062379 InParanoid:Q9C0J8
OMA:TVMEVKL OrthoDB:EOG4V6ZG7 PhylomeDB:Q9C0J8 ChiTaRS:WDR33
GenomeRNAi:55339 NextBio:59651 ArrayExpress:Q9C0J8 Bgee:Q9C0J8
CleanEx:HS_WDR33 Genevestigator:Q9C0J8 GermOnline:ENSG00000136709
Uniprot:Q9C0J8
Length = 1336
Score = 149 (57.5 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 39/128 (30%), Positives = 59/128 (46%)
Query: 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFG 69
H++TV +V ++ G L TAS D K+ + N + L +GH+ VAW HP
Sbjct: 287 HKNTVMEVKLNLNGNWLLTASRDHLCKLFDIRN-LKEELQVFRGHKKEATAVAW-HPVHE 344
Query: 70 SILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNIS 129
+ AS DG ++ W G + + H+ + S+AW H LG L GS+D
Sbjct: 345 GLFASGGSDGSLLFWHVGVEKEVGGMEMA--HEGMIWSLAW--HPLGHILCSGSNDHTSK 400
Query: 130 VFTATADG 137
+T G
Sbjct: 401 FWTRNRPG 408
Score = 132 (51.5 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 72/298 (24%), Positives = 118/298 (39%)
Query: 23 GKRLATASSDSSIKIIGLSNSASQHLAT-LKGHRGPVWQVAWAHPKFGSILASCSYDGQV 81
G+RL T +S L N + + T L+ H PV + W+H + A + G V
Sbjct: 131 GRRLVTGASSGEFT---LWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD--HGGYV 185
Query: 82 IIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDT 141
W + N N+ F HK ++ +++P + + C S DG + ++
Sbjct: 186 KYW-QSNMNN---VKMFQAHKEAIREASFSPTDNKFA-TC-SDDGTVRIWDFLR---CHE 236
Query: 142 TRIDQAHPVGVTSVSWAPA---MAPGALVG---LGLLDPV--QKLASCGCD-NTVKVWKM 192
RI + H V V W P + G+ + DP Q LA+ NTV K+
Sbjct: 237 ERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKL 296
Query: 193 -YNGIWKMD------C--FPA------LQM---HSDWVRSVAWAPNLGLPKSTIASASQD 234
NG W + C F LQ+ H +VAW P + + AS D
Sbjct: 297 NLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHP---VHEGLFASGGSD 353
Query: 235 GTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANNVT-LWKEAVDGE 291
G+++ W E E G + + +WS++W G++L ++ + W G+
Sbjct: 354 GSLLFWHVGVEKEV--GGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGD 409
>CGD|CAL0000383 [details] [associations]
symbol:orf19.4293 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0002098 "tRNA
wobble uridine modification" evidence=IEA] [GO:0000055 "ribosomal
large subunit export from nucleus" evidence=IEA] [GO:0016226
"iron-sulfur cluster assembly" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0000383 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AACQ01000021 EMBL:AACQ01000022 RefSeq:XP_720601.1
RefSeq:XP_720729.1 ProteinModelPortal:Q5AG86 STRING:Q5AG86
GeneID:3637653 GeneID:3637738 KEGG:cal:CaO19.11769
KEGG:cal:CaO19.4293 Uniprot:Q5AG86
Length = 383
Score = 142 (55.0 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 62/250 (24%), Positives = 104/250 (41%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQH---LATLKGHRGPVWQVAWAH 65
GHE+ V V +F G+ LA+ S D S+ I + +A L H V V+W H
Sbjct: 135 GHENEVKAVDWNFQGQYLASCSRDKSVWIWETDPETLEEFECVAVLNDHSQDVKNVSW-H 193
Query: 66 PKFGSILASCSYDGQVIIWKEGNQND-WTQAHTFNDHKSSV-----NSIAWAPHELG-LS 118
P +ILAS SYD + I+++ D W+ N H+ +V S+ + L
Sbjct: 194 PSM-NILASSSYDDTIRIYQQDIAGDEWSCVGILNGHEGTVWCSKFESLKSPIADSSVLR 252
Query: 119 LACGSSDGNISVFTATADG-GWDTTRIDQAHPVGVTS-VSWA-----PAMAPGALVGLGL 171
L S D ++ ++ A + + +++ + T+ + W P++ + +
Sbjct: 253 LVSASDDLSVRIWVAKREQEDEEQAKLELPSSIRHTNEMVWEVESVLPSVHKYPVYSVAW 312
Query: 172 LDPVQKLASCGCDNTVKVW-KMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIAS 230
K+AS G D + V+ + G W +D + V WA L + S
Sbjct: 313 SALTGKIASAGSDGKIVVYSETEKGKWVIDSIHEGAHGVHEINCVIWA-QLDDENEILVS 371
Query: 231 ASQDGTVVIW 240
A DG V +W
Sbjct: 372 AGDDGYVNLW 381
Score = 142 (55.0 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 71/282 (25%), Positives = 115/282 (40%)
Query: 36 KIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQN--DWT 93
+I+ N+ +A ++GH V V W G LASCS D V IW+ + ++
Sbjct: 118 EILTSPNNEWNLMAIIEGHENEVKAVDWNFQ--GQYLASCSRDKSVWIWETDPETLEEFE 175
Query: 94 QAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGG-WDTTRIDQAHPVGV 152
NDH V +++W P + + LA S D I ++ G W I H V
Sbjct: 176 CVAVLNDHSQDVKNVSWHP-SMNI-LASSSYDDTIRIYQQDIAGDEWSCVGILNGHEGTV 233
Query: 153 TSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVW------------KMY------- 193
+ +P A V +L S D +V++W K+
Sbjct: 234 WCSKFESLKSPIAD------SSVLRLVSASDDLSVRIWVAKREQEDEEQAKLELPSSIRH 287
Query: 194 -NG-IWKMDC-FPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQW- 249
N +W+++ P++ H V SVAW+ G IASA DG +V+++ ++G+ W
Sbjct: 288 TNEMVWEVESVLPSV--HKYPVYSVAWSALTG----KIASAGSDGKIVVYSETEKGK-WV 340
Query: 250 -----EG-RVLKDFKTPVWSVSWSLTGNLLAVADANNVTLWK 285
EG + + +W+ L++ D V LWK
Sbjct: 341 IDSIHEGAHGVHEINCVIWAQLDDENEILVSAGDDGYVNLWK 382
Score = 96 (38.9 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 59/237 (24%), Positives = 94/237 (39%)
Query: 46 QHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFND-HKSS 104
Q L ++K H VW V+ HP I+A+ S D ++K + + D HK S
Sbjct: 3 QLLHSIKAHNDKVWSVS-VHPTL-PIIATASTDKSTKLYKLSARQKFPLVAKLEDTHKRS 60
Query: 105 VNSIAWAPHELGL-----------SLACGSSDGNISVFTATA-DGGWDTTRIDQAHPVGV 152
+ S+A+ P G +LA GS D ISV+ D +D + +
Sbjct: 61 IRSVAFKPPLGGADTPKSDFLDLPALAAGSFDSTISVWGIDEPDVEYDIEEVIANQKEIL 120
Query: 153 TSVS--W-APAMAPGALVGLGLLD-PVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMH 208
TS + W A+ G + +D Q C VW ++ F + +
Sbjct: 121 TSPNNEWNLMAIIEGHENEVKAVDWNFQGQYLASCSRDKSVWIWETDPETLEEFECVAVL 180
Query: 209 SDWVRSVAWAPNLGL-PKSTI-ASASQDGTVVIWTCAKEGEQWEG-RVLKDFKTPVW 262
+D + V N+ P I AS+S D T+ I+ G++W +L + VW
Sbjct: 181 NDHSQDVK---NVSWHPSMNILASSSYDDTIRIYQQDIAGDEWSCVGILNGHEGTVW 234
Score = 74 (31.1 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 249 WEGR-VLKDF-KTPVWSVSWS-LTGNLLAVADANNVTLWKEAVDGEWQQVSVVE 299
WE VL K PV+SV+WS LTG + + + ++ E G+W S+ E
Sbjct: 293 WEVESVLPSVHKYPVYSVAWSALTGKIASAGSDGKIVVYSETEKGKWVIDSIHE 346
>UNIPROTKB|Q5AG86 [details] [associations]
symbol:CIA1 "Probable cytosolic iron-sulfur protein
assembly protein 1" species:237561 "Candida albicans SC5314"
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0000383 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AACQ01000021 EMBL:AACQ01000022 RefSeq:XP_720601.1
RefSeq:XP_720729.1 ProteinModelPortal:Q5AG86 STRING:Q5AG86
GeneID:3637653 GeneID:3637738 KEGG:cal:CaO19.11769
KEGG:cal:CaO19.4293 Uniprot:Q5AG86
Length = 383
Score = 142 (55.0 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 62/250 (24%), Positives = 104/250 (41%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQH---LATLKGHRGPVWQVAWAH 65
GHE+ V V +F G+ LA+ S D S+ I + +A L H V V+W H
Sbjct: 135 GHENEVKAVDWNFQGQYLASCSRDKSVWIWETDPETLEEFECVAVLNDHSQDVKNVSW-H 193
Query: 66 PKFGSILASCSYDGQVIIWKEGNQND-WTQAHTFNDHKSSV-----NSIAWAPHELG-LS 118
P +ILAS SYD + I+++ D W+ N H+ +V S+ + L
Sbjct: 194 PSM-NILASSSYDDTIRIYQQDIAGDEWSCVGILNGHEGTVWCSKFESLKSPIADSSVLR 252
Query: 119 LACGSSDGNISVFTATADG-GWDTTRIDQAHPVGVTS-VSWA-----PAMAPGALVGLGL 171
L S D ++ ++ A + + +++ + T+ + W P++ + +
Sbjct: 253 LVSASDDLSVRIWVAKREQEDEEQAKLELPSSIRHTNEMVWEVESVLPSVHKYPVYSVAW 312
Query: 172 LDPVQKLASCGCDNTVKVW-KMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIAS 230
K+AS G D + V+ + G W +D + V WA L + S
Sbjct: 313 SALTGKIASAGSDGKIVVYSETEKGKWVIDSIHEGAHGVHEINCVIWA-QLDDENEILVS 371
Query: 231 ASQDGTVVIW 240
A DG V +W
Sbjct: 372 AGDDGYVNLW 381
Score = 142 (55.0 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 71/282 (25%), Positives = 115/282 (40%)
Query: 36 KIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQN--DWT 93
+I+ N+ +A ++GH V V W G LASCS D V IW+ + ++
Sbjct: 118 EILTSPNNEWNLMAIIEGHENEVKAVDWNFQ--GQYLASCSRDKSVWIWETDPETLEEFE 175
Query: 94 QAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGG-WDTTRIDQAHPVGV 152
NDH V +++W P + + LA S D I ++ G W I H V
Sbjct: 176 CVAVLNDHSQDVKNVSWHP-SMNI-LASSSYDDTIRIYQQDIAGDEWSCVGILNGHEGTV 233
Query: 153 TSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVW------------KMY------- 193
+ +P A V +L S D +V++W K+
Sbjct: 234 WCSKFESLKSPIAD------SSVLRLVSASDDLSVRIWVAKREQEDEEQAKLELPSSIRH 287
Query: 194 -NG-IWKMDC-FPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQW- 249
N +W+++ P++ H V SVAW+ G IASA DG +V+++ ++G+ W
Sbjct: 288 TNEMVWEVESVLPSV--HKYPVYSVAWSALTG----KIASAGSDGKIVVYSETEKGK-WV 340
Query: 250 -----EG-RVLKDFKTPVWSVSWSLTGNLLAVADANNVTLWK 285
EG + + +W+ L++ D V LWK
Sbjct: 341 IDSIHEGAHGVHEINCVIWAQLDDENEILVSAGDDGYVNLWK 382
Score = 96 (38.9 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 59/237 (24%), Positives = 94/237 (39%)
Query: 46 QHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFND-HKSS 104
Q L ++K H VW V+ HP I+A+ S D ++K + + D HK S
Sbjct: 3 QLLHSIKAHNDKVWSVS-VHPTL-PIIATASTDKSTKLYKLSARQKFPLVAKLEDTHKRS 60
Query: 105 VNSIAWAPHELGL-----------SLACGSSDGNISVFTATA-DGGWDTTRIDQAHPVGV 152
+ S+A+ P G +LA GS D ISV+ D +D + +
Sbjct: 61 IRSVAFKPPLGGADTPKSDFLDLPALAAGSFDSTISVWGIDEPDVEYDIEEVIANQKEIL 120
Query: 153 TSVS--W-APAMAPGALVGLGLLD-PVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMH 208
TS + W A+ G + +D Q C VW ++ F + +
Sbjct: 121 TSPNNEWNLMAIIEGHENEVKAVDWNFQGQYLASCSRDKSVWIWETDPETLEEFECVAVL 180
Query: 209 SDWVRSVAWAPNLGL-PKSTI-ASASQDGTVVIWTCAKEGEQWEG-RVLKDFKTPVW 262
+D + V N+ P I AS+S D T+ I+ G++W +L + VW
Sbjct: 181 NDHSQDVK---NVSWHPSMNILASSSYDDTIRIYQQDIAGDEWSCVGILNGHEGTVW 234
Score = 74 (31.1 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 249 WEGR-VLKDF-KTPVWSVSWS-LTGNLLAVADANNVTLWKEAVDGEWQQVSVVE 299
WE VL K PV+SV+WS LTG + + + ++ E G+W S+ E
Sbjct: 293 WEVESVLPSVHKYPVYSVAWSALTGKIASAGSDGKIVVYSETEKGKWVIDSIHE 346
>UNIPROTKB|I3LTD5 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 OMA:TVMEVKL EMBL:CU855997
EMBL:CU914448 Ensembl:ENSSSCT00000026043 Uniprot:I3LTD5
Length = 1471
Score = 149 (57.5 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 39/128 (30%), Positives = 59/128 (46%)
Query: 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFG 69
H++TV +V ++ G L TAS D K+ + N + L +GH+ VAW HP
Sbjct: 288 HKNTVMEVKLNLNGNWLLTASRDHLCKLFDIRN-LKEELQVFRGHKKEATAVAW-HPVHE 345
Query: 70 SILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNIS 129
+ AS DG ++ W G + + H+ + S+AW H LG L GS+D
Sbjct: 346 GLFASGGSDGSLLFWHVGVEKEVGGMEMA--HEGMIWSLAW--HPLGHILCSGSNDHTSK 401
Query: 130 VFTATADG 137
+T G
Sbjct: 402 FWTRNRPG 409
Score = 132 (51.5 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 72/298 (24%), Positives = 118/298 (39%)
Query: 23 GKRLATASSDSSIKIIGLSNSASQHLAT-LKGHRGPVWQVAWAHPKFGSILASCSYDGQV 81
G+RL T +S L N + + T L+ H PV + W+H + A + G V
Sbjct: 132 GRRLVTGASSGEFT---LWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD--HGGYV 186
Query: 82 IIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDT 141
W + N N+ F HK ++ +++P + + C S DG + ++
Sbjct: 187 KYW-QSNMNN---VKMFQAHKEAIREASFSPTDNKFA-TC-SDDGTVRIWDFLR---CHE 237
Query: 142 TRIDQAHPVGVTSVSWAPA---MAPGALVG---LGLLDPV--QKLASCGCD-NTVKVWKM 192
RI + H V V W P + G+ + DP Q LA+ NTV K+
Sbjct: 238 ERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKL 297
Query: 193 -YNGIWKMD------C--FPA------LQM---HSDWVRSVAWAPNLGLPKSTIASASQD 234
NG W + C F LQ+ H +VAW P + + AS D
Sbjct: 298 NLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHP---VHEGLFASGGSD 354
Query: 235 GTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANNVT-LWKEAVDGE 291
G+++ W E E G + + +WS++W G++L ++ + W G+
Sbjct: 355 GSLLFWHVGVEKEV--GGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGD 410
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 103 (41.3 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 26/78 (33%), Positives = 43/78 (55%)
Query: 8 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPK 67
TGH + + G ++AT+S+DS++ + L+ +A H PV VAW+ PK
Sbjct: 15 TGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAA--RCIRFASHSAPVNGVAWS-PK 71
Query: 68 FGSILASCSYDGQVIIWK 85
G+++AS +D V IW+
Sbjct: 72 -GNLVASAGHDRTVKIWE 88
Score = 92 (37.4 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 24/79 (30%), Positives = 39/79 (49%)
Query: 53 GHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAP 112
GH G + Q+ + P G+ +A+ S D VI+W N N + F H + VN +AW+P
Sbjct: 16 GHSGGITQLRFG-PD-GAQIATSSTDSTVILW---NLNQAARCIRFASHSAPVNGVAWSP 70
Query: 113 HELGLSLACGSSDGNISVF 131
G +A D + ++
Sbjct: 71 K--GNLVASAGHDRTVKIW 87
Score = 81 (33.6 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 27/102 (26%), Positives = 49/102 (48%)
Query: 184 DNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCA 243
D + K+W+ + + + ++WVRS ++PN L +A+AS D +V I+
Sbjct: 123 DKSAKIWR----VARRQFVSSFAQQNNWVRSAKFSPNGKL----VATASDDKSVRIYD-V 173
Query: 244 KEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVA-DANNVTLW 284
GE R + + ++W GN+LAVA N + ++
Sbjct: 174 DSGECV--RTFTEERAAPRQLAWHPWGNMLAVALGCNRIKIF 213
>UNIPROTKB|F1P8Q5 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9615 "Canis lupus
familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:NMCSIYS EMBL:AAEX03015272
ProteinModelPortal:F1P8Q5 Ensembl:ENSCAFT00000023270 Uniprot:F1P8Q5
Length = 340
Score = 111 (44.1 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 32/117 (27%), Positives = 56/117 (47%)
Query: 33 SSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDW 92
S ++++G ++ TL+GH ++ + WA +L S S DG++I+W N
Sbjct: 35 SGLEVVGRVQMRTRR--TLRGHLAKIYAMHWATDS--KLLVSASQDGKLIVWDTYTTN-- 88
Query: 93 TQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATA-DGGWDTTRIDQAH 148
+ H S V + A+AP G +ACG D S+++ + +G +R AH
Sbjct: 89 -KVHAIPLRSSWVMTCAYAPS--GNFVACGGLDNMCSIYSLKSREGNVKVSRELSAH 142
Score = 70 (29.7 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 30/122 (24%), Positives = 54/122 (44%)
Query: 172 LDPVQKLASCG-CDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIAS 230
+ P KL G CD + K+W + G C H + ++ + PN G I +
Sbjct: 192 VSPDFKLFISGACDASAKLWDVREGT----CRQTFTGHESDINAICFFPN-G---EAICT 243
Query: 231 ASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLL-AVADANNVTLWKEAVD 289
S D + ++ + ++ + + SV++SL+G LL A D N +W +++
Sbjct: 244 GSDDASCRLFDLRAD-QELTAYSDESIICGITSVAFSLSGRLLFAGYDDFNCNIW-DSMK 301
Query: 290 GE 291
GE
Sbjct: 302 GE 303
>UNIPROTKB|P79147 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9615 "Canis lupus
familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U52916 EMBL:AY751537 EMBL:DQ672621
RefSeq:NP_001003004.1 UniGene:Cfa.5 ProteinModelPortal:P79147
SMR:P79147 PRIDE:P79147 GeneID:403511 KEGG:cfa:403511 CTD:2784
eggNOG:NOG269251 KO:K07825 NextBio:20817024 Uniprot:P79147
Length = 340
Score = 111 (44.1 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 32/117 (27%), Positives = 56/117 (47%)
Query: 33 SSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDW 92
S ++++G ++ TL+GH ++ + WA +L S S DG++I+W N
Sbjct: 35 SGLEVVGRVQMRTRR--TLRGHLAKIYAMHWATDS--KLLVSASQDGKLIVWDTYTTN-- 88
Query: 93 TQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATA-DGGWDTTRIDQAH 148
+ H S V + A+AP G +ACG D S+++ + +G +R AH
Sbjct: 89 -KVHAIPLRSSWVMTCAYAPS--GNFVACGGLDNMCSIYSLKSREGNVKVSRELSAH 142
Score = 70 (29.7 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 30/122 (24%), Positives = 54/122 (44%)
Query: 172 LDPVQKLASCG-CDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIAS 230
+ P KL G CD + K+W + G C H + ++ + PN G I +
Sbjct: 192 VSPDFKLFISGACDASAKLWDVREGT----CRQTFTGHESDINAICFFPN-G---EAICT 243
Query: 231 ASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLL-AVADANNVTLWKEAVD 289
S D + ++ + ++ + + SV++SL+G LL A D N +W +++
Sbjct: 244 GSDDASCRLFDLRAD-QELTAYSDESIICGITSVAFSLSGRLLFAGYDDFNCNIW-DSMK 301
Query: 290 GE 291
GE
Sbjct: 302 GE 303
>UNIPROTKB|F1S8S6 [details] [associations]
symbol:WDR26 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 OMA:IRGQFYQ CTD:80232 EMBL:CU927957
RefSeq:XP_003357688.1 UniGene:Ssc.21945 Ensembl:ENSSSCT00000011871
GeneID:100523327 KEGG:ssc:100523327 Uniprot:F1S8S6
Length = 660
Score = 112 (44.5 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 34/110 (30%), Positives = 53/110 (48%)
Query: 51 LKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQA-HTFNDHKSSVNSIA 109
L H VW +++ G+ LA+ S D VIIW+ + T H V+ IA
Sbjct: 350 LTEHCNEVWFCKFSND--GTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYIA 407
Query: 110 WAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAP 159
W+P + L +ACG D + ++ G T++ Q+H +TSV+W P
Sbjct: 408 WSPDDNYL-VACGPDDCS-ELWLWNVQTGELRTKMSQSHEDSLTSVAWNP 455
Score = 106 (42.4 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 39/147 (26%), Positives = 60/147 (40%)
Query: 4 QKIETGHEDTVHDVAMDFYGKRLATASSDSSIKI--IGLSNSASQHLATLKGHRGPVWQV 61
Q+I T H + V G +LAT S D+++ I + + L TL+GH V +
Sbjct: 347 QQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYI 406
Query: 62 AWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLAC 121
AW+ P + L +C D +W Q + H+ S+ S+AW P G
Sbjct: 407 AWS-PD-DNYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPD--GKRFVT 462
Query: 122 GSSDGNISVFTATADGG----WDTTRI 144
G G + DG W+ R+
Sbjct: 463 GGQRGQF--YQCDLDGNLLDSWEGVRV 487
Score = 77 (32.2 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 23/53 (43%), Positives = 30/53 (56%)
Query: 191 KMYNGIW-KMDCFPALQM--HSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW 240
K+Y IW K P ++ H+ V V+W P + P S +ASAS DGTV IW
Sbjct: 593 KVY--IWHKRSELPIAELTGHTRTVNCVSWNPQI--P-SMMASASDDGTVRIW 640
Score = 51 (23.0 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 19/62 (30%), Positives = 28/62 (45%)
Query: 228 IASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWS--LTGNLLAVADANNVTLWK 285
IAS S+D V IW K E + +T V VSW+ + + + +D V +W
Sbjct: 585 IASGSEDHKVYIWH--KRSELPIAELTGHTRT-VNCVSWNPQIPSMMASASDDGTVRIWG 641
Query: 286 EA 287
A
Sbjct: 642 PA 643
>UNIPROTKB|Q9H7D7 [details] [associations]
symbol:WDR26 "WD repeat-containing protein 26" species:9606
"Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOVERGEN:HBG083958 OMA:IRGQFYQ OrthoDB:EOG4GHZNV EMBL:AB209887
EMBL:AC099790 EMBL:BC031471 EMBL:BC034498 EMBL:BC052301
EMBL:BC063817 EMBL:AY221751 EMBL:AY304473 EMBL:AF130049
EMBL:EF011612 EMBL:AK024669 IPI:IPI00414197 IPI:IPI00645819
IPI:IPI00646469 IPI:IPI00829602 RefSeq:NP_001108585.2
RefSeq:NP_079436.4 UniGene:Hs.497873 UniGene:Hs.729289
ProteinModelPortal:Q9H7D7 SMR:Q9H7D7 IntAct:Q9H7D7 STRING:Q9H7D7
PhosphoSite:Q9H7D7 DMDM:134047967 PaxDb:Q9H7D7 PRIDE:Q9H7D7
Ensembl:ENST00000295024 Ensembl:ENST00000366852
Ensembl:ENST00000414423 GeneID:80232 KEGG:hsa:80232 UCSC:uc001hop.4
UCSC:uc001hoq.4 UCSC:uc021pjt.1 CTD:80232 GeneCards:GC01M224573
HGNC:HGNC:21208 HPA:HPA028539 neXtProt:NX_Q9H7D7
PharmGKB:PA134907873 InParanoid:Q9H7D7 ChiTaRS:WDR26
GenomeRNAi:80232 NextBio:70673 ArrayExpress:Q9H7D7 Bgee:Q9H7D7
CleanEx:HS_WDR26 Genevestigator:Q9H7D7 GermOnline:ENSG00000162923
Uniprot:Q9H7D7
Length = 661
Score = 112 (44.5 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 34/110 (30%), Positives = 53/110 (48%)
Query: 51 LKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQA-HTFNDHKSSVNSIA 109
L H VW +++ G+ LA+ S D VIIW+ + T H V+ IA
Sbjct: 351 LTEHCNEVWFCKFSND--GTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYIA 408
Query: 110 WAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAP 159
W+P + L +ACG D + ++ G T++ Q+H +TSV+W P
Sbjct: 409 WSPDDNYL-VACGPDDCS-ELWLWNVQTGELRTKMSQSHEDSLTSVAWNP 456
Score = 106 (42.4 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 39/147 (26%), Positives = 60/147 (40%)
Query: 4 QKIETGHEDTVHDVAMDFYGKRLATASSDSSIKI--IGLSNSASQHLATLKGHRGPVWQV 61
Q+I T H + V G +LAT S D+++ I + + L TL+GH V +
Sbjct: 348 QQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYI 407
Query: 62 AWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLAC 121
AW+ P + L +C D +W Q + H+ S+ S+AW P G
Sbjct: 408 AWS-PD-DNYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPD--GKRFVT 463
Query: 122 GSSDGNISVFTATADGG----WDTTRI 144
G G + DG W+ R+
Sbjct: 464 GGQRGQF--YQCDLDGNLLDSWEGVRV 488
Score = 77 (32.2 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 23/53 (43%), Positives = 30/53 (56%)
Query: 191 KMYNGIW-KMDCFPALQM--HSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW 240
K+Y IW K P ++ H+ V V+W P + P S +ASAS DGTV IW
Sbjct: 594 KVY--IWHKRSELPIAELTGHTRTVNCVSWNPQI--P-SMMASASDDGTVRIW 641
Score = 51 (23.0 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 19/62 (30%), Positives = 28/62 (45%)
Query: 228 IASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWS--LTGNLLAVADANNVTLWK 285
IAS S+D V IW K E + +T V VSW+ + + + +D V +W
Sbjct: 586 IASGSEDHKVYIWH--KRSELPIAELTGHTRT-VNCVSWNPQIPSMMASASDDGTVRIWG 642
Query: 286 EA 287
A
Sbjct: 643 PA 644
>MGI|MGI:1919387 [details] [associations]
symbol:Wdsub1 "WD repeat, SAM and U-box domain containing 1"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 MGI:MGI:1919387 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:AK011391
EMBL:AL929242 EMBL:BC050792 EMBL:BC061948 IPI:IPI00132574
RefSeq:NP_001153108.1 RefSeq:NP_082394.1 UniGene:Mm.288734
UniGene:Mm.488684 ProteinModelPortal:Q9D0I6 SMR:Q9D0I6
PhosphoSite:Q9D0I6 PRIDE:Q9D0I6 Ensembl:ENSMUST00000028368
GeneID:72137 KEGG:mmu:72137 UCSC:uc008jto.2 InParanoid:Q9D0I6
NextBio:335536 Bgee:Q9D0I6 CleanEx:MM_WDSUB1 Genevestigator:Q9D0I6
Uniprot:Q9D0I6
Length = 474
Score = 113 (44.8 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 39/124 (31%), Positives = 59/124 (47%)
Query: 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFG 69
H D V A F LAT S D +I++ LS+ A + LK H V ++ P G
Sbjct: 11 HGDDVSCCA--FSAALLATCSLDKTIRLYSLSDFAELPYSPLKFHTYAVHCCCFS-PS-G 66
Query: 70 SILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNIS 129
+LASCS DG ++W + + T S V ++P LA G++DG+I+
Sbjct: 67 HVLASCSTDGTTVLWSSHSGHTLTVLE--QPGGSPVRVCCFSPDSA--YLASGAADGSIA 122
Query: 130 VFTA 133
++ A
Sbjct: 123 LWNA 126
Score = 104 (41.7 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 46/153 (30%), Positives = 74/153 (48%)
Query: 40 LSNSASQHLATLKGHRG--PVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHT 97
L +S S H T+ G PV +V P + LAS + DG + +W N +
Sbjct: 80 LWSSHSGHTLTVLEQPGGSPV-RVCCFSPD-SAYLASGAADGSIALW---NAQTYKLYRC 134
Query: 98 FNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSW 157
+ SS+ + A++P + GL + GSS G+++V+ D ++AH +G+T S+
Sbjct: 135 GSVKDSSLVACAFSP-DGGLFVT-GSSGGDLTVW----DDRMRCLHSEKAHDLGITCCSF 188
Query: 158 APAMAPGALVGLGLLDPVQKLASCGCDNTVKVW 190
+ G G GL +LASCG D +K+W
Sbjct: 189 SSQPLSG---GEGLQS--YQLASCGQDCEIKLW 216
Score = 72 (30.4 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 38/114 (33%), Positives = 53/114 (46%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
LAS D +V + +GI L H+ +V + A+APN L +A+ S D TV
Sbjct: 253 LASGSVDKSVII----HGIGPQSVLHTLTQHTRYVTTCAFAPNTLL----LATGSMDKTV 304
Query: 238 VIWTCAKEGEQWEGRV---LKDFKTPVWS---VS-W-SLTG--NLLAVADANNV 281
IW E +G + LK F T WS VS W G +L+ + ANN+
Sbjct: 305 NIWQFDLE-TPCQGSMNDPLKHF-TEEWSEEDVSVWLRAQGLEDLVGIFRANNI 356
Score = 41 (19.5 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 222 GLPKSTIASASQDGTVVIW--TCAKE-GEQWEGR-VLKDFKTPVWSVSWSLTGNLLA 274
GL +AS QD + +W T + G + + + L PV + ++S G +LA
Sbjct: 198 GLQSYQLASCGQDCEIKLWAVTITRVLGFELKYKSTLSGHCAPVLACAFSHDGKMLA 254
>WB|WBGene00001679 [details] [associations]
symbol:gpb-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0035046 "pronuclear migration"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0040013 "negative
regulation of locomotion" evidence=IMP] [GO:0046662 "regulation of
oviposition" evidence=IMP] [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0009792 GO:GO:0000132
GO:GO:0035046 GO:GO:0018991 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0040013 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0004871
GO:GO:0046662 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 OMA:CMLWDIE
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X17497 EMBL:AF291846
EMBL:Z49127 PIR:S09591 PIR:T20830 RefSeq:NP_001254312.1
UniGene:Cel.6600 ProteinModelPortal:P17343 SMR:P17343 STRING:P17343
PaxDb:P17343 PRIDE:P17343 EnsemblMetazoa:F13D12.7a.1
EnsemblMetazoa:F13D12.7a.2 EnsemblMetazoa:F13D12.7a.3 GeneID:174803
KEGG:cel:CELE_F13D12.7 UCSC:F13D12.7.1 CTD:174803
WormBase:F13D12.7a InParanoid:P17343 KO:K07972 NextBio:885576
ArrayExpress:P17343 Uniprot:P17343
Length = 340
Score = 105 (42.0 bits), Expect = 6.7e-07, Sum P(2) = 6.7e-07
Identities = 35/119 (29%), Positives = 57/119 (47%)
Query: 26 LATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWK 85
LAT +S+ ++ IG ++ TL+GH ++ + WA L S S DG++I+W
Sbjct: 30 LATVASN--LEPIGRIQMRTRR--TLRGHLAKIYAMHWASDSRN--LVSASQDGKLIVWD 83
Query: 86 EGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTA-TADGGWDTTR 143
N + H S V + A+AP G +ACG D S+++ T +G +R
Sbjct: 84 SYTTN---KVHAIPLRSSWVMTCAYAPS--GSFVACGGLDNICSIYSLKTREGNVRVSR 137
Score = 76 (31.8 bits), Expect = 6.7e-07, Sum P(2) = 6.7e-07
Identities = 33/123 (26%), Positives = 55/123 (44%)
Query: 164 GALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGL 223
G ++ L L + S CD + K+W + +G+ K FP H + +VA+ P+ G
Sbjct: 185 GDVMSLSLSPDFRTFISGACDASAKLWDIRDGMCKQT-FPG---HESDINAVAFFPS-G- 238
Query: 224 PKSTIASASQDGTVVIWTCAKEGEQWEGRVLKD-FKTPVWSVSWSLTGNLL-AVADANNV 281
+ A+ S D T ++ + E D + SV++S +G LL A D N
Sbjct: 239 --NAFATGSDDATCRLFDIRADQEL--AMYSHDNIICGITSVAFSKSGRLLFAGYDDFNC 294
Query: 282 TLW 284
+W
Sbjct: 295 NVW 297
>UNIPROTKB|C9JLV4 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9606 "Homo sapiens" [GO:0006952 "defense response"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005794 GO:GO:0006952
GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
InterPro:IPR011047 SUPFAM:SSF50998 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 EMBL:AC011248
HOGENOM:HOG000290173 HGNC:HGNC:576 EMBL:AC013283 IPI:IPI00953387
SMR:C9JLV4 STRING:C9JLV4 Ensembl:ENST00000339433
Ensembl:ENST00000549007 Uniprot:C9JLV4
Length = 1163
Score = 116 (45.9 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 32/116 (27%), Positives = 52/116 (44%)
Query: 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFG 69
H D V+ G+R+A+ +D ++++ + L +K H V A++
Sbjct: 614 HTDAVYHACFSEDGQRIASCGADKTLQVF--KAETGEKLLEIKAHEDEVLCCAFSTDD-- 669
Query: 70 SILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD 125
+A+CS D +V IW N HT+++H VN + L LA GSSD
Sbjct: 670 RFIATCSVDKKVKIW---NSMTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSD 722
Score = 77 (32.2 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 31/117 (26%), Positives = 51/117 (43%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
LA+ D +K+W + N + +C + H++ V ++P+ L +AS S DGT+
Sbjct: 716 LATGSSDCFLKLWDL-N---QKECRNTMFGHTNSVNHCRFSPDDKL----LASCSADGTL 767
Query: 238 VIWTCAKEGEQWEGRVLK----------DFKTPVWSVSWSLTGNLLAVADANNVTLW 284
+W E+ V + D + V SWS G + VA N + LW
Sbjct: 768 KLWDATSANERKSINVKQFFLNLEDPQEDMEVIVKCCSWSADGARIMVAAKNKIFLW 824
Score = 69 (29.3 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 15/61 (24%), Positives = 26/61 (42%)
Query: 164 GALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQ----MHSDWVRSVAWAP 219
G ++ + K +S D T K+W + NG C P + H WV + ++P
Sbjct: 1043 GTVLSCDISHDATKFSSTSADKTAKIWNVSNGELLHLCAPLSEEGAATHGGWVTDLCFSP 1102
Query: 220 N 220
+
Sbjct: 1103 D 1103
Score = 56 (24.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 19/63 (30%), Positives = 28/63 (44%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
L S D ++VW W++D L+ H + V+ N S + S S DGTV
Sbjct: 975 LISSSDDAEIQVWN-----WQLDKCIFLRGHQETVKDFRLLKN-----SRLLSWSFDGTV 1024
Query: 238 VIW 240
+W
Sbjct: 1025 KVW 1027
Score = 53 (23.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 22/71 (30%), Positives = 30/71 (42%)
Query: 177 KLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGT 236
+L S D TVKVW + G + D F H V S ++ + +S S D T
Sbjct: 1014 RLLSWSFDGTVKVWNIITGNKEKD-FVC---HQGTVLSC----DISHDATKFSSTSADKT 1065
Query: 237 VVIWTCAKEGE 247
IW + GE
Sbjct: 1066 AKIWNVSN-GE 1075
Score = 47 (21.6 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 17/68 (25%), Positives = 27/68 (39%)
Query: 213 RSVAWAPNLGLPKSTIASASQDGTVVIWT-----CA-KEGEQWEGRVLKDFKTPVWS--V 264
+ W + T+ S+S D + +W C G Q +KDF+ S +
Sbjct: 960 KKTVWHIQFTADEKTLISSSDDAEIQVWNWQLDKCIFLRGHQ---ETVKDFRLLKNSRLL 1016
Query: 265 SWSLTGNL 272
SWS G +
Sbjct: 1017 SWSFDGTV 1024
>UNIPROTKB|B8YE10 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1Y-linked"
species:9544 "Macaca mulatta" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006508 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 KO:K04508 HOGENOM:HOG000220902
HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:90665 EMBL:FJ527023
RefSeq:NP_001138540.1 UniGene:Mmu.17760 ProteinModelPortal:B8YE10
STRING:B8YE10 GeneID:100270702 KEGG:mcc:100270702 NextBio:19970520
Uniprot:B8YE10
Length = 520
Score = 141 (54.7 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 42/136 (30%), Positives = 66/136 (48%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWA---- 64
GH + V+ + D G LA+ S D ++KI + A H L+ HR ++ + W+
Sbjct: 353 GHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVH--NLQAHRKEIYTIKWSPTGP 410
Query: 65 ---HPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLAC 121
+P +LAS S+D V +W + Q T HT H+ V S+A++P G LA
Sbjct: 411 TTSNPNSSIMLASASFDSTVRLW-DMEQGVCT--HTLRKHQEPVYSVAFSPD--GKYLAS 465
Query: 122 GSSDGNISVFTATADG 137
GS D + ++ T G
Sbjct: 466 GSFDKCVHIWN-TQSG 480
Score = 126 (49.4 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 47/146 (32%), Positives = 68/146 (46%)
Query: 146 QAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMD-CFPA 204
Q H V ++ W P+ G+L LASC D T+K+W M K D C
Sbjct: 352 QGHTNEVNAIKWDPS---------GML-----LASCSDDMTLKIWSM-----KQDACVHN 392
Query: 205 LQMHSDWVRSVAWAPN---LGLPKSTI--ASASQDGTVVIWTCAKEGEQWEGRVLKDFKT 259
LQ H + ++ W+P P S+I ASAS D TV +W ++G L+ +
Sbjct: 393 LQAHRKEIYTIKWSPTGPTTSNPNSSIMLASASFDSTVRLWDM-EQGVCTH--TLRKHQE 449
Query: 260 PVWSVSWSLTGNLLAVADANN-VTLW 284
PV+SV++S G LA + V +W
Sbjct: 450 PVYSVAFSPDGKYLASGSFDKCVHIW 475
>MGI|MGI:1306796 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA;TAS]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IGI] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=ISO] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=ISO;IGI;IMP] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0007420 "brain development" evidence=IMP] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=ISO] [GO:0010659
"cardiac muscle cell apoptotic process" evidence=ISO] [GO:0010952
"positive regulation of peptidase activity" evidence=IPI]
[GO:0016505 "apoptotic protease activator activity" evidence=IPI]
[GO:0030900 "forebrain development" evidence=IMP] [GO:0031072 "heat
shock protein binding" evidence=ISO] [GO:0042802 "identical protein
binding" evidence=ISO;IPI] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043293 "apoptosome" evidence=ISO]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0051402 "neuron apoptotic
process" evidence=IGI] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR000767 InterPro:IPR001315
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00619 Pfam:PF00931 PRINTS:PR00364
PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294 SMART:SM00320
EMBL:AF064071 MGI:MGI:1306796 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005794 GO:GO:0006952 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
GO:GO:0043531 GO:GO:0006919 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 GO:GO:0016505 CTD:317
HOVERGEN:HBG018730 KO:K02084 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:BC131683 EMBL:BC131684 IPI:IPI00135366
IPI:IPI00654978 RefSeq:NP_001036023.1 RefSeq:NP_033814.2
UniGene:Mm.220289 PDB:3SFZ PDB:3SHF PDBsum:3SFZ PDBsum:3SHF
ProteinModelPortal:O88879 SMR:O88879 IntAct:O88879 STRING:O88879
PhosphoSite:O88879 PaxDb:O88879 PRIDE:O88879
Ensembl:ENSMUST00000020157 Ensembl:ENSMUST00000159110 GeneID:11783
KEGG:mmu:11783 GeneTree:ENSGT00700000104017 InParanoid:A2RRK8
ChiTaRS:APAF1 NextBio:279591 Bgee:O88879 CleanEx:MM_APAF1
Genevestigator:O88879 GermOnline:ENSMUSG00000019979 Uniprot:O88879
Length = 1249
Score = 114 (45.2 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 31/116 (26%), Positives = 52/116 (44%)
Query: 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFG 69
H D V+ G+R+A+ +D ++++ + L +K H V A++
Sbjct: 614 HTDAVYHACFSQDGQRIASCGADKTLQVF--KAETGEKLLDIKAHEDEVLCCAFSSDD-- 669
Query: 70 SILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD 125
S +A+CS D +V IW HT+++H VN + L LA GS+D
Sbjct: 670 SYIATCSADKKVKIWDSATGK---LVHTYDEHSEQVNCCHFTNKSNHLLLATGSND 722
Score = 79 (32.9 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 36/116 (31%), Positives = 49/116 (42%)
Query: 177 KLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGT 236
+L S D TVKVW + G + D F H V S A + + +S S D T
Sbjct: 1057 RLLSWSFDGTVKVWNVITGRIERD-FTC---HQGTVLSCA----ISSDATKFSSTSADKT 1108
Query: 237 VVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGE 291
IW+ E LK V ++SL G LLA D N + +W + DG+
Sbjct: 1109 AKIWSFDLLSPLHE---LKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVS-DGQ 1160
Score = 67 (28.6 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 32/117 (27%), Positives = 53/117 (45%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
LA+ D +K+W + N + +C + H++ V ++P+ L +AS S DGT+
Sbjct: 716 LATGSNDFFLKLWDL-N---QKECRNTMFGHTNSVNHCRFSPDDEL----LASCSADGTL 767
Query: 238 VIWTCAKEGEQWEGRVLKDF---KTPVWSV-------SWSLTGNLLAVADANNVTLW 284
+W E+ V + F + P V SWS G+ + VA N V L+
Sbjct: 768 RLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLF 824
Score = 64 (27.6 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 187 VKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAK 244
V++W + + + DC + H WV V ++P+ G S+ +AS D T+ +W K
Sbjct: 864 VELWNIDSRLKVADC----RGHLSWVHGVMFSPD-G---SSFLTASDDQTIRVWETKK 913
Score = 62 (26.9 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 23/80 (28%), Positives = 34/80 (42%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
L S D+ ++VW W+ + LQ H + V+ L S + S S DGTV
Sbjct: 1018 LISSSEDSVIQVWN-----WQTGDYVFLQAHQETVKDFRL-----LQDSRLLSWSFDGTV 1067
Query: 238 VIWTCAKEGEQWEGRVLKDF 257
+W GR+ +DF
Sbjct: 1068 KVWNVIT------GRIERDF 1081
Score = 56 (24.8 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 19/72 (26%), Positives = 30/72 (41%)
Query: 178 LASCGCDN-TVKVWKMYNGIWKMDCFP-----ALQMHSDWVRSVAWAPNLGLPKSTIASA 231
L + G DN +++W + +G C P H WV V ++P+ T+ SA
Sbjct: 1141 LLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPD----SKTLVSA 1196
Query: 232 SQDGTVVIWTCA 243
G + W A
Sbjct: 1197 G--GYLKWWNVA 1206
Score = 52 (23.4 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 18/84 (21%), Positives = 37/84 (44%)
Query: 164 GALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGL 223
G ++ + K +S D T K+W + L+ H+ VR A++ + G+
Sbjct: 1086 GTVLSCAISSDATKFSSTSADKTAKIWSFD----LLSPLHELKGHNGCVRCSAFSLD-GI 1140
Query: 224 PKSTIASASQDGTVVIWTCAKEGE 247
+A+ +G + IW + +G+
Sbjct: 1141 ---LLATGDDNGEIRIWNVS-DGQ 1160
Score = 52 (23.4 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 29/117 (24%), Positives = 50/117 (42%)
Query: 163 PGALVGLGLLDPVQKLASCGC-DNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNL 221
P A V L P + + G D +K+ ++ N F + H VR + + +
Sbjct: 960 PEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNN----RVFSSGVGHKKAVRHIQFTAD- 1014
Query: 222 GLPKSTIASASQDGTVVIWTCAKEGE----QWEGRVLKDFKTPVWS--VSWSLTGNL 272
G T+ S+S+D + +W + G+ Q +KDF+ S +SWS G +
Sbjct: 1015 G---KTLISSSEDSVIQVWNW-QTGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTV 1067
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 104 (41.7 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 37/131 (28%), Positives = 58/131 (44%)
Query: 1 MPAQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQ 60
+ + K+ GH+D V + F G R+ + S D+++K+ S + L TL GH G VW
Sbjct: 292 LKSPKVLKGHDDHVI-TCLQFCGNRIVSGSDDNTLKV--WSAVTGKCLRTLVGHTGGVWS 348
Query: 61 VAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLA 120
+I+ S S D + +W N HT H S+V + HE +
Sbjct: 349 SQMRD----NIIISGSTDRTLKVW---NAETGECIHTLYGHTSTVRCMHL--HEK--RVV 397
Query: 121 CGSSDGNISVF 131
GS D + V+
Sbjct: 398 SGSRDATLRVW 408
Score = 90 (36.7 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 33/123 (26%), Positives = 55/123 (44%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH TV M + KR+ + S D+++++ + H+ L GH V V +
Sbjct: 381 GHTSTVR--CMHLHEKRVVSGSRDATLRVWDIETGQCLHV--LMGHVAAVRCVQYD---- 432
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
G + S +YD V +W + T HT H + V S+ + G+ + GS D +I
Sbjct: 433 GRRVVSGAYDFMVKVWDPETE---TCLHTLQGHTNRVYSLQFD----GIHVVSGSLDTSI 485
Query: 129 SVF 131
V+
Sbjct: 486 RVW 488
Score = 83 (34.3 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 35/115 (30%), Positives = 49/115 (42%)
Query: 168 GLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKST 227
G+ L D + L S D+TVK+W + G C LQ S +V L K+
Sbjct: 508 GMELKDNI--LVSGNADSTVKIWDIKTG----QCLQTLQGPSKHQSAVTC---LQFNKNF 558
Query: 228 IASASQDGTVVIWTCAKEGEQWEGRVLKDFKTP---VWSVSWSLTGNLLAVADAN 279
+ ++S DGTV +W K GE V + VW + S T + AV N
Sbjct: 559 VITSSDDGTVKLWDL-KTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRN 612
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 116 (45.9 bits), Expect = 0.00052, P = 0.00052
Identities = 28/76 (36%), Positives = 45/76 (59%)
Query: 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFG 69
H V+ ++ G L TASSD ++K++ L + + TL+GH GPV+ V+++ K G
Sbjct: 227 HSCGVNCLSFHPLGNSLVTASSDGTVKMLDLIEG--RLIYTLQGHTGPVFTVSFS--KDG 282
Query: 70 SILASCSYDGQVIIWK 85
+L S D QV+IW+
Sbjct: 283 ELLTSGGADAQVLIWR 298
Score = 97 (39.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 37/112 (33%), Positives = 59/112 (52%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
+AS G D+ VK+W + K+ Q+HS V +++ P LG +++ +AS DGTV
Sbjct: 201 IASAGSDHAVKIWDIRMN--KL--LQHYQVHSCGVNCLSFHP-LG---NSLVTASSDGTV 252
Query: 238 VIWTCAKEGEQWEGRV---LKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWK 285
K + EGR+ L+ PV++VS+S G LL A+ V +W+
Sbjct: 253 ------KMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIWR 298
Score = 87 (35.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 31/126 (24%), Positives = 54/126 (42%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH+D V + G LA+AS D ++++ L + K H PV V ++
Sbjct: 58 GHKDVVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKS--SEFKAHTAPVRSVDFSAD-- 113
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
G +L + S D + +W Q ++ H V ++P + L ++C S D I
Sbjct: 114 GQLLVTASEDKSIKVWSMFRQRF---LYSLYRHTHWVRCAKFSP-DGRLIVSC-SEDKTI 168
Query: 129 SVFTAT 134
++ T
Sbjct: 169 KIWDTT 174
Score = 82 (33.9 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 32/124 (25%), Positives = 58/124 (46%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH+ + K++ATAS D+ + + L A + GH+ V + ++ P+
Sbjct: 16 GHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYV--GHKDVVTSLQFS-PQ- 71
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
G++LAS S D V +W + ++ F H + V S+ ++ G L S D +I
Sbjct: 72 GNLLASASRDRTVRLWVLDRKG---KSSEFKAHTAPVRSVDFSAD--GQLLVTASEDKSI 126
Query: 129 SVFT 132
V++
Sbjct: 127 KVWS 130
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 112 (44.5 bits), Expect = 0.00079, P = 0.00079
Identities = 52/172 (30%), Positives = 76/172 (44%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH + DVA RL +AS D ++K+ + + L TLKGH V+ + P
Sbjct: 79 GHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKC--LKTLKGHSDFVFCCDFNPPS- 135
Query: 69 GSILASCSYDGQVIIW--KEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDG 126
+++ S S+D V IW K G AH+ D S+VN G + GS DG
Sbjct: 136 -NLIVSGSFDESVKIWEVKTGKCLKTLSAHS--DPISAVNFNC-----NGSLIVSGSYDG 187
Query: 127 NISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKL 178
++ A A G T D+ +P V+ V ++P G + LD KL
Sbjct: 188 LCRIWDA-ASGQCLRTLADEGNPP-VSFVKFSPN---GKYILTATLDNTLKL 234
Score = 107 (42.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 34/116 (29%), Positives = 56/116 (48%)
Query: 177 KLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGT 236
+L S D T+KVW M +G C L+ HSD+V + P P + I S S D +
Sbjct: 95 RLVSASDDKTLKVWDMRSG----KCLKTLKGHSDFVFCCDFNP----PSNLIVSGSFDES 146
Query: 237 VVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANNVT-LWKEAVDGE 291
V IW K G+ + L P+ +V+++ G+L+ + + +W +A G+
Sbjct: 147 VKIWE-VKTGKCL--KTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIW-DAASGQ 198
Score = 98 (39.6 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 36/113 (31%), Positives = 48/113 (42%)
Query: 174 PVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQ 233
P + S D +VK+W++ G C L HSD + +V N S I S S
Sbjct: 134 PSNLIVSGSFDESVKIWEVKTG----KCLKTLSAHSDPISAV----NFNCNGSLIVSGSY 185
Query: 234 DGTVVIWTCAKEGEQWEGRVLKDF-KTPVWSVSWSLTGNLLAVADANN-VTLW 284
DG IW A G+ R L D PV V +S G + A +N + LW
Sbjct: 186 DGLCRIWDAAS-GQCL--RTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLW 235
Score = 71 (30.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 23/76 (30%), Positives = 36/76 (47%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH + V G+ LA++++D+ I I G + + TL GH + VAW+
Sbjct: 37 GHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKK--TLYGHSLEISDVAWSSDS- 93
Query: 69 GSILASCSYDGQVIIW 84
S L S S D + +W
Sbjct: 94 -SRLVSASDDKTLKVW 108
>RGD|708344 [details] [associations]
symbol:Gnb3 "guanine nucleotide binding protein (G protein), beta
polypeptide 3" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0043005 "neuron projection" evidence=IDA] [GO:0044297 "cell
body" evidence=IDA] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 RGD:708344 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043005 GO:GO:0004871
GO:GO:0044297 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS OrthoDB:EOG4J118C
EMBL:L29090 EMBL:BC086422 IPI:IPI00204239 PIR:I53871
RefSeq:NP_068630.1 UniGene:Rn.27065 ProteinModelPortal:P52287
SMR:P52287 STRING:P52287 PhosphoSite:P52287 PRIDE:P52287
Ensembl:ENSRNOT00000021481 GeneID:60449 KEGG:rno:60449
UCSC:RGD:708344 InParanoid:P52287 NextBio:612200
ArrayExpress:P52287 Genevestigator:P52287
GermOnline:ENSRNOG00000015541 Uniprot:P52287
Length = 340
Score = 111 (44.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 32/117 (27%), Positives = 56/117 (47%)
Query: 33 SSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDW 92
S ++++G ++ TL+GH ++ + WA +L S S DG++I+W N
Sbjct: 35 SGLEVVGRVQMRTRR--TLRGHLAKIYAMHWATDS--KLLVSASQDGKLIVWDTYTTN-- 88
Query: 93 TQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATA-DGGWDTTRIDQAH 148
+ H S V + A+AP G +ACG D S+++ + +G +R AH
Sbjct: 89 -KVHAIPLRSSWVMTCAYAPS--GNFVACGGLDNMCSIYSLKSREGNVKVSRELSAH 142
Score = 67 (28.6 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 28/115 (24%), Positives = 49/115 (42%)
Query: 172 LDPVQKLASCG-CDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIAS 230
+ P KL G CD + K+W + G C H + ++ + PN G I +
Sbjct: 192 VSPDYKLFISGACDASAKLWDVREGT----CRQTFTGHESDINAICFFPN-G---EAICT 243
Query: 231 ASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLL-AVADANNVTLW 284
S D + ++ + ++ + + SV++SL+G LL A D N +W
Sbjct: 244 GSDDASCRLFDLRAD-QELTAYSHESIICGITSVAFSLSGRLLFAGYDDFNCNVW 297
>MGI|MGI:95785 [details] [associations]
symbol:Gnb3 "guanine nucleotide binding protein (G protein),
beta 3" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0043005 "neuron projection" evidence=ISO] [GO:0044297 "cell
body" evidence=ISO] [GO:0051020 "GTPase binding" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95785 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
EMBL:AC002397 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784
KO:K07825 OMA:NMCSIYS OrthoDB:EOG4J118C EMBL:AK014789 EMBL:BC018239
EMBL:U38494 IPI:IPI00116938 RefSeq:NP_038558.1 UniGene:Mm.68889
ProteinModelPortal:Q61011 SMR:Q61011 STRING:Q61011
PhosphoSite:Q61011 PaxDb:Q61011 PRIDE:Q61011
Ensembl:ENSMUST00000024206 GeneID:14695 KEGG:mmu:14695
InParanoid:Q61011 NextBio:286643 Bgee:Q61011 Genevestigator:Q61011
GermOnline:ENSMUSG00000023439 Uniprot:Q61011
Length = 340
Score = 110 (43.8 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 32/117 (27%), Positives = 55/117 (47%)
Query: 33 SSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDW 92
S ++++G ++ TL+GH ++ + WA +L S S DG++I+W N
Sbjct: 35 SGLEVVGRVQMRTRR--TLRGHLAKIYAMHWATDS--KLLVSASQDGKLIVWDTYTTN-- 88
Query: 93 TQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATA-DGGWDTTRIDQAH 148
+ H S V + A+AP G +ACG D S++ + +G +R AH
Sbjct: 89 -KVHAIPLRSSWVMTCAYAPS--GNFVACGGLDNMCSIYNLKSREGNVKVSRELSAH 142
Score = 68 (29.0 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 28/115 (24%), Positives = 49/115 (42%)
Query: 172 LDPVQKLASCG-CDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIAS 230
+ P KL G CD + K+W + G C H + ++ + PN G I +
Sbjct: 192 VSPDYKLFISGACDASAKLWDVREGT----CRQTFTGHESDINAICFFPN-G---EAICT 243
Query: 231 ASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLL-AVADANNVTLW 284
S D + ++ + ++ + + SV++SL+G LL A D N +W
Sbjct: 244 GSDDASCRLFDLRAD-QELTAYSQESIICGITSVAFSLSGRLLFAGYDDFNCNVW 297
>CGD|CAL0004044 [details] [associations]
symbol:orf19.268 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0070912 "Ddb1-Ckn1 complex" evidence=IEA]
[GO:0006283 "transcription-coupled nucleotide-excision repair"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0004044 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000027 KO:K10570
RefSeq:XP_719966.1 ProteinModelPortal:Q5AEK0 STRING:Q5AEK0
GeneID:3638414 KEGG:cal:CaO19.268 Uniprot:Q5AEK0
Length = 447
Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 41/141 (29%), Positives = 67/141 (47%)
Query: 14 VHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILA 73
V+D+ + +ATA+ I+++ L++++S H TL GH+G V W HP +ILA
Sbjct: 169 VYDIDISAENALIATANDQPFIRLLDLNSTSSAH--TLSGHKGKTLVVKW-HPINSNILA 225
Query: 74 SCSYDGQVIIWK-EGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFT 132
S YDG+V IW +Q+ TQ + SS + H +S G++ ++T
Sbjct: 226 SGGYDGEVKIWDIRRSQSCLTQLDMSRTNDSSYTTKLSKAHSGPVSGLVWDHSGSL-LYT 284
Query: 133 ATADGG---WDTTRIDQAHPV 150
D WD + P+
Sbjct: 285 VGNDDKIRVWDMVNVSTPPPI 305
>UNIPROTKB|Q5AEK0 [details] [associations]
symbol:RAD28 "Putative uncharacterized protein RAD28"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0004044 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000027 KO:K10570
RefSeq:XP_719966.1 ProteinModelPortal:Q5AEK0 STRING:Q5AEK0
GeneID:3638414 KEGG:cal:CaO19.268 Uniprot:Q5AEK0
Length = 447
Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 41/141 (29%), Positives = 67/141 (47%)
Query: 14 VHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILA 73
V+D+ + +ATA+ I+++ L++++S H TL GH+G V W HP +ILA
Sbjct: 169 VYDIDISAENALIATANDQPFIRLLDLNSTSSAH--TLSGHKGKTLVVKW-HPINSNILA 225
Query: 74 SCSYDGQVIIWK-EGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFT 132
S YDG+V IW +Q+ TQ + SS + H +S G++ ++T
Sbjct: 226 SGGYDGEVKIWDIRRSQSCLTQLDMSRTNDSSYTTKLSKAHSGPVSGLVWDHSGSL-LYT 284
Query: 133 ATADGG---WDTTRIDQAHPV 150
D WD + P+
Sbjct: 285 VGNDDKIRVWDMVNVSTPPPI 305
>TAIR|locus:2123929 [details] [associations]
symbol:VIP3 "AT4G29830" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009910 "negative regulation
of flower development" evidence=IGI;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=IPI] [GO:0010452 "histone H3-K36 methylation"
evidence=IMP] [GO:0051568 "histone H3-K4 methylation" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AL050352 EMBL:AL161575
GO:GO:0009910 GO:GO:0051568 HSSP:P16649 GO:GO:0080008 GO:GO:0010452
UniGene:At.23602 UniGene:At.72983 HOGENOM:HOG000036765 KO:K12602
OMA:PPSEVWG EMBL:BT008333 IPI:IPI00518529 PIR:T08544
RefSeq:NP_194712.1 SMR:Q9SZQ5 IntAct:Q9SZQ5 STRING:Q9SZQ5
EnsemblPlants:AT4G29830.1 GeneID:829105 KEGG:ath:AT4G29830
TAIR:At4g29830 InParanoid:Q9SZQ5 ProtClustDB:CLSN2685393
Genevestigator:Q9SZQ5 Uniprot:Q9SZQ5
Length = 321
Score = 108 (43.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 44/141 (31%), Positives = 65/141 (46%)
Query: 5 KIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWA 64
+ TGH V +A G A++S DS +++ + +A+ +A L+ VW + +
Sbjct: 54 RTNTGHSLGVAALAAHPSGIIAASSSIDSFVRVFDVDTNAT--IAVLEAPPSEVWGMQF- 110
Query: 65 HPKFGSILASCS-YDGQVIIWKEGNQNDWTQAHTFN----------DHKSS---VNSIAW 110
PK G+ILA V +W + W T + D SS V S+AW
Sbjct: 111 EPK-GTILAVAGGSSASVKLWDTAS---WRLISTLSIPRPDAPKPSDKTSSKKFVLSVAW 166
Query: 111 APHELGLSLACGSSDGNISVF 131
+P+ G LACGS DG I VF
Sbjct: 167 SPN--GKRLACGSMDGTICVF 185
Score = 69 (29.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 24/84 (28%), Positives = 39/84 (46%)
Query: 208 HSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWS 267
H+ WV SV +P+ G IA+ S D TV +W + + + VWSV++
Sbjct: 242 HTSWVLSVDASPDGG----AIATGSSDRTVRLWDLKMRAAI---QTMSNHNDQVWSVAFR 294
Query: 268 -------LTGNLLAVADANNVTLW 284
G L +V+D +V+L+
Sbjct: 295 PPGGTGVRAGRLASVSDDKSVSLY 318
>ASPGD|ASPL0000017699 [details] [associations]
symbol:AN8187 species:162425 "Emericella nidulans"
[GO:0000778 "condensed nuclear chromosome kinetochore"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IEA] [GO:0034501 "protein localization to
kinetochore" evidence=IEA] [GO:0031055 "chromatin remodeling at
centromere" evidence=IEA] [GO:0070317 "negative regulation of G0 to
G1 transition" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:0031066 "regulation of histone deacetylation at
centromere" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001302 OMA:CQPDLRL InterPro:IPR022052
Pfam:PF12265 EnsemblFungi:CADANIAT00004230 Uniprot:C8V748
Length = 411
Score = 138 (53.6 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 53/192 (27%), Positives = 85/192 (44%)
Query: 8 TGHEDTVHDVAMD-FYGKRLATASSDSSIKIIGLSNS-ASQHLATLKG-HRGPVWQVAWA 64
T H V+DV + + T S D +++I+ + ++ AT +G HR + +A+
Sbjct: 211 THHSSIVNDVQHHPLHSSLIGTVSDDITLQILDTRVAETTRAAATAEGQHRDAINAIAF- 269
Query: 65 HPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSS 124
+P ++LA+ S D + +W N T+ HT +H SV SI+W P E + LA S
Sbjct: 270 NPAAETVLATGSADKTIGLWDLRNLK--TKLHTLENHTDSVTSISWHPFEEAV-LASASY 326
Query: 125 DGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCD 184
D I + + G T Q P + + L DP L S D
Sbjct: 327 DRKIMFWDLSRAGEEQTPEDAQDGPPELLFMHGGHTNRISDF-SWNLNDP-WVLCSAAED 384
Query: 185 NTVKVWKMYNGI 196
N ++VWK+ + I
Sbjct: 385 NLLQVWKVADAI 396
Score = 114 (45.2 bits), Expect = 0.00069, P = 0.00069
Identities = 28/83 (33%), Positives = 46/83 (55%)
Query: 3 AQKIETGHEDTVHDVAMDFYGKR-LATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQV 61
A E H D ++ +A + + LAT S+D +I + L N ++ L TL+ H V +
Sbjct: 253 AATAEGQHRDAINAIAFNPAAETVLATGSADKTIGLWDLRNLKTK-LHTLENHTDSVTSI 311
Query: 62 AWAHPKFGSILASCSYDGQVIIW 84
+W HP ++LAS SYD +++ W
Sbjct: 312 SW-HPFEEAVLASASYDRKIMFW 333
>ZFIN|ZDB-GENE-061110-97 [details] [associations]
symbol:zgc:154085 "zgc:154085" species:7955 "Danio
rerio" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 ZFIN:ZDB-GENE-061110-97 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 EMBL:CABZ01026183 EMBL:CABZ01026184 EMBL:CABZ01048063
EMBL:CABZ01048064 EMBL:FP236277 IPI:IPI00993801
Ensembl:ENSDART00000128024 ArrayExpress:E7F9P4 Bgee:E7F9P4
Uniprot:E7F9P4
Length = 487
Score = 139 (54.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 76/285 (26%), Positives = 127/285 (44%)
Query: 8 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPK 67
+GH VH G+ LA+ S+D++ + + + + G R PV A++ P
Sbjct: 51 SGHGYGVHCCCFSACGQYLASCSTDATTMVWSMDTGEIEAVLEHPG-RSPVRVCAFS-PD 108
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGN 127
S L S DG + +W + + ND +S+ + ++ P G GS+ G+
Sbjct: 109 -SSHLVSGGSDGSIALW-DFTSRTLRRTGVVND--TSIVACSFTP--CGQMFITGSTYGD 162
Query: 128 ISVFTATADGGWDTTRIDQ-AHPVGVTSVSWAPAMAPGALVGLGLLDPVQ-KLASCGCDN 185
+ ++ D + ++ AH +GV+ +AP M G G VQ +LASCG D+
Sbjct: 163 LRLW----DLNMNHLHAEKNAHDLGVSCAQFAPKMMKGT-DGC-----VQFRLASCGQDS 212
Query: 186 TVKVWKMY----NGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWT 241
+K+W + GI KM L S V S A++P+ G + S S D TV ++
Sbjct: 213 LLKIWIVSLLPSAGI-KMQLAHTLTGQSAPVLSCAYSPD-G---QMLVSGSVDKTVTVYQ 267
Query: 242 CAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWK 285
A EG L V + ++S T L+A + +V +W+
Sbjct: 268 -ADEGVLLY--TLHQHDRYVTACAFSPTAPLIATGSMDKSVNIWR 309
>UNIPROTKB|Q8N0X2 [details] [associations]
symbol:SPAG16 "Sperm-associated antigen 16 protein"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086 EMBL:AF310672
EMBL:AF426740 EMBL:AF490390 EMBL:AK026377 EMBL:AK095036
EMBL:CR457359 EMBL:CR749477 EMBL:AL832962 EMBL:BC009614
EMBL:BC067756 EMBL:BC100282 IPI:IPI00166103 IPI:IPI00396021
IPI:IPI00470876 IPI:IPI00556122 IPI:IPI00556405
RefSeq:NP_001020607.1 RefSeq:NP_078808.3 UniGene:Hs.602792
ProteinModelPortal:Q8N0X2 SMR:Q8N0X2 IntAct:Q8N0X2 STRING:Q8N0X2
PhosphoSite:Q8N0X2 DMDM:146329993 PRIDE:Q8N0X2
Ensembl:ENST00000272898 Ensembl:ENST00000331683
Ensembl:ENST00000413312 Ensembl:ENST00000432529 GeneID:79582
KEGG:hsa:79582 UCSC:uc002veo.3 UCSC:uc002veq.3 UCSC:uc002ves.1
UCSC:uc010fuz.2 CTD:79582 GeneCards:GC02P214149 H-InvDB:HIX0021055
HGNC:HGNC:23225 HPA:HPA037542 MIM:612173 neXtProt:NX_Q8N0X2
PharmGKB:PA134887898 HOVERGEN:HBG086482 InParanoid:Q8N0X2
OMA:EGHNHAV OrthoDB:EOG41ZF9F PhylomeDB:Q8N0X2 GenomeRNAi:79582
NextBio:68570 ArrayExpress:Q8N0X2 Bgee:Q8N0X2 CleanEx:HS_SPAG16
Genevestigator:Q8N0X2 GermOnline:ENSG00000144451 Uniprot:Q8N0X2
Length = 631
Score = 132 (51.5 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 40/125 (32%), Positives = 58/125 (46%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH D + D G +LAT+S D+++K+ L + T +GH VW W H
Sbjct: 392 GHTDWLSDCCFHPSGDKLATSSGDTTVKLWDLCKGDC--ILTFEGHSRAVWSCTW-H-SC 447
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
G+ +AS S D IW + N T H SVNSI + P +L S+D +
Sbjct: 448 GNFVASSSLDKTSKIW---DVNSERCRCTLYGHTDSVNSIEFFP--FSNTLLTSSADKTL 502
Query: 129 SVFTA 133
S++ A
Sbjct: 503 SIWDA 507
Score = 50 (22.7 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 29/115 (25%), Positives = 43/115 (37%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
L + D T+ +W GI + + MHS + + P G IAS G
Sbjct: 493 LLTSSADKTLSIWDARTGICEQSLYG--HMHS--INDAIFDPR-G---HMIASCDACGVT 544
Query: 238 VIWTCAKEGEQWEGRVLKDF-KTPVWSVSWSLTGNLLAVADANNVTLWKEAVDGE 291
+W K V D +P V++ +G +LA A N V + GE
Sbjct: 545 KLWDFRK----LLPIVSIDIGPSPGNEVNFDSSGRVLAQASGNGVIHLLDLKSGE 595
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 104 (41.7 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 37/131 (28%), Positives = 58/131 (44%)
Query: 1 MPAQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQ 60
+ + K+ GH+D V + F G R+ + S D+++K+ S + L TL GH G VW
Sbjct: 250 LKSPKVLKGHDDHVI-TCLQFCGNRIVSGSDDNTLKV--WSAVTGKCLRTLVGHTGGVWS 306
Query: 61 VAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLA 120
+I+ S S D + +W N HT H S+V + HE +
Sbjct: 307 SQMRD----NIIISGSTDRTLKVW---NAETGECIHTLYGHTSTVRCMHL--HEK--RVV 355
Query: 121 CGSSDGNISVF 131
GS D + V+
Sbjct: 356 SGSRDATLRVW 366
Score = 90 (36.7 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 33/123 (26%), Positives = 55/123 (44%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH TV M + KR+ + S D+++++ + H+ L GH V V +
Sbjct: 339 GHTSTVR--CMHLHEKRVVSGSRDATLRVWDIETGQCLHV--LMGHVAAVRCVQYD---- 390
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
G + S +YD V +W + T HT H + V S+ + G+ + GS D +I
Sbjct: 391 GRRVVSGAYDFMVKVWDPETE---TCLHTLQGHTNRVYSLQFD----GIHVVSGSLDTSI 443
Query: 129 SVF 131
V+
Sbjct: 444 RVW 446
Score = 80 (33.2 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 34/115 (29%), Positives = 49/115 (42%)
Query: 168 GLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKST 227
G+ L D + L S D+TVK+W + G C LQ + +V L K+
Sbjct: 466 GMELKDNI--LVSGNADSTVKIWDIKTG----QCLQTLQGPNKHQSAVTC---LQFNKNF 516
Query: 228 IASASQDGTVVIWTCAKEGEQWEGRVLKDFKTP---VWSVSWSLTGNLLAVADAN 279
+ ++S DGTV +W K GE V + VW + S T + AV N
Sbjct: 517 VITSSDDGTVKLWDL-KTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRN 570
>UNIPROTKB|G3MZA8 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 OMA:HCCCFSP
EMBL:DAAA02004471 ProteinModelPortal:G3MZA8
Ensembl:ENSBTAT00000064632 Uniprot:G3MZA8
Length = 477
Score = 119 (46.9 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 48/181 (26%), Positives = 77/181 (42%)
Query: 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFG 69
H VH G LA+ S+D + + N Q LA ++ G +V P
Sbjct: 53 HTYAVHCCCFSPSGHILASCSTDGTTVLWDTQNG--QILAVMEQPSGSPVRVCRFSPD-S 109
Query: 70 SILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNIS 129
+ L S + DG V++W N + + S+ + A+ P G GSS G+++
Sbjct: 110 TCLVSGASDGTVVLW---NAQSYKLHRCASVKDGSLVACAFFPP--GNLFVTGSSCGDLT 164
Query: 130 VFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKV 189
V+ D ++AH +G+T ++ PG GL +LASCG D +K+
Sbjct: 165 VW----DDKMRCLHSEKAHDLGITCCDFSSQPVPGGERGLQFF----QLASCGQDCQIKI 216
Query: 190 W 190
W
Sbjct: 217 W 217
Score = 114 (45.2 bits), Expect = 0.00087, P = 0.00087
Identities = 47/157 (29%), Positives = 70/157 (44%)
Query: 25 RLATASSDSSIKI-----IGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDG 79
+LA+ D IKI I + ++ +TL GH PV A++H G +L S S D
Sbjct: 204 QLASCGQDCQIKIWVISFIHILGFELKYKSTLTGHCAPVLACAFSHD--GQMLVSGSVDK 261
Query: 80 QVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGW 139
VI++ +N HT H V + A+AP+ L LA GS D ++++ +
Sbjct: 262 SVIVYDTNTENI---LHTLTQHTRYVTTCAFAPNIL--LLATGSMDKTVNIWQFDTETLC 316
Query: 140 DTTRI-DQAHPVGVTSVSWAPAMAPGALVGLGLLDPV 175
+I DQ P T +W+ L GL D V
Sbjct: 317 QEAKIPDQ--PKQFTE-NWSEDDVSNWLCAEGLEDLV 350
Score = 108 (43.1 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 39/124 (31%), Positives = 56/124 (45%)
Query: 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFG 69
H D V+ A F LAT + D +I++ LS+ + LK H V ++ P G
Sbjct: 11 HNDDVNCCA--FSSSLLATCALDKTIRLYFLSDFTEVPYSPLKFHTYAVHCCCFS-PS-G 66
Query: 70 SILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNIS 129
ILASCS DG ++W QN A S V ++P L G+SDG +
Sbjct: 67 HILASCSTDGTTVLWD--TQNGQILAVMEQPSGSPVRVCRFSPDST--CLVSGASDGTVV 122
Query: 130 VFTA 133
++ A
Sbjct: 123 LWNA 126
Score = 61 (26.5 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 21/61 (34%), Positives = 30/61 (49%)
Query: 205 LQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFK--TPVW 262
L H+ +V + A+APN+ L +A+ S D TV IW E E ++ K T W
Sbjct: 277 LTQHTRYVTTCAFAPNILL----LATGSMDKTVNIWQFDTETLCQEAKIPDQPKQFTENW 332
Query: 263 S 263
S
Sbjct: 333 S 333
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 103 (41.3 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 37/127 (29%), Positives = 56/127 (44%)
Query: 5 KIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWA 64
K+ GH+D V + F G R+ + S D+++K+ S + L TL GH G VW
Sbjct: 296 KVLKGHDDHVI-TCLQFCGNRIVSGSDDNTLKV--WSAVTGKCLRTLVGHTGGVWSSQMR 352
Query: 65 HPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSS 124
+I+ S S D + +W N HT H S+V + HE + GS
Sbjct: 353 D----NIIISGSTDRTLKVW---NAETGECIHTLYGHTSTVRCMHL--HEK--RVVSGSR 401
Query: 125 DGNISVF 131
D + V+
Sbjct: 402 DATLRVW 408
Score = 90 (36.7 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 33/123 (26%), Positives = 55/123 (44%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH TV M + KR+ + S D+++++ + H+ L GH V V +
Sbjct: 381 GHTSTVR--CMHLHEKRVVSGSRDATLRVWDIETGQCLHV--LMGHVAAVRCVQYD---- 432
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
G + S +YD V +W + T HT H + V S+ + G+ + GS D +I
Sbjct: 433 GRRVVSGAYDFMVKVWDPETE---TCLHTLQGHTNRVYSLQFD----GIHVVSGSLDTSI 485
Query: 129 SVF 131
V+
Sbjct: 486 RVW 488
Score = 81 (33.6 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 27/80 (33%), Positives = 38/80 (47%)
Query: 168 GLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKST 227
G+ L D + L S D+TVK+W + G C LQ S +V L K+
Sbjct: 508 GMELKDNI--LVSGNADSTVKIWDIKTG----QCLQTLQGPSKHQSAVTC---LQFNKNF 558
Query: 228 IASASQDGTVVIWTCAKEGE 247
+ ++S DGTV +W K GE
Sbjct: 559 VITSSDDGTVKLWDL-KTGE 577
>UNIPROTKB|E1C9D6 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:AADN02061119 IPI:IPI00578429 RefSeq:XP_425517.3
ProteinModelPortal:E1C9D6 PRIDE:E1C9D6 Ensembl:ENSGALT00000023410
GeneID:427945 KEGG:gga:427945 Uniprot:E1C9D6
Length = 340
Score = 112 (44.5 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 32/117 (27%), Positives = 55/117 (47%)
Query: 33 SSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDW 92
S ++++G ++ TL+GH ++ + W+ +L S S DG++I+W N
Sbjct: 35 SGVEVVGRIQMRTRR--TLRGHLAKIYAMHWSTDS--KLLVSASQDGKLIVWDTYTTN-- 88
Query: 93 TQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTA-TADGGWDTTRIDQAH 148
+ H S V + A+AP G +ACG D S++ T +G +R AH
Sbjct: 89 -KVHAIPLRSSWVMTCAYAPS--GNFVACGGLDNMCSIYNLKTREGNVKVSRELSAH 142
Score = 64 (27.6 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 29/115 (25%), Positives = 46/115 (40%)
Query: 172 LDPVQKLASCG-CDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIAS 230
+ P KL G CD T K+W + G C H + ++ + PN G I +
Sbjct: 192 VSPDFKLFISGACDATAKLWDVREGT----CRQTFSGHESDINAICFFPN-G---EAICT 243
Query: 231 ASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVA-DANNVTLW 284
S D T ++ + E + + SV++S +G LL D N +W
Sbjct: 244 GSDDATCRLFDLRADQELIVYSH-ESIICGITSVAFSRSGRLLLAGYDDFNCNIW 297
>UNIPROTKB|B8ZZF2 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50105
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 GO:GO:0004842 GO:GO:0000151
EMBL:AC009307 HOGENOM:HOG000231980 HOVERGEN:HBG080511 EMBL:AC008277
HGNC:HGNC:26697 IPI:IPI00915918 ProteinModelPortal:B8ZZF2
SMR:B8ZZF2 Ensembl:ENST00000409124 ArrayExpress:B8ZZF2 Bgee:B8ZZF2
Uniprot:B8ZZF2
Length = 429
Score = 121 (47.7 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 48/181 (26%), Positives = 78/181 (43%)
Query: 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFG 69
H VH G LA+ S+D + + N Q LA ++ G +V P
Sbjct: 53 HTYAVHCCCFSPSGHILASCSTDGTTVLWNTENG--QMLAVMEQPSGSPVRVCQFSPD-S 109
Query: 70 SILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNIS 129
+ LAS + DG V++W N + + S+ + A++P+ G GSS G+++
Sbjct: 110 TCLASGAADGTVVLW---NAQSYKLYRCGSVKDGSLAACAFSPN--GSFFVTGSSCGDLT 164
Query: 130 VFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKV 189
V+ D ++AH +G+T ++ GL +LASCG D VK+
Sbjct: 165 VW----DDKMRCPHSEKAHDLGITCCDFSSQPVSDGEQGLQFF----RLASCGQDCQVKI 216
Query: 190 W 190
W
Sbjct: 217 W 217
Score = 117 (46.2 bits), Expect = 0.00034, P = 0.00034
Identities = 36/112 (32%), Positives = 55/112 (49%)
Query: 25 RLATASSDSSIKI--IGLSNSASQHL---ATLKGHRGPVWQVAWAHPKFGSILASCSYDG 79
RLA+ D +KI + ++ L +TL GH PV A++H G +L S S D
Sbjct: 204 RLASCGQDCQVKIWIVSFTHILGFELKYKSTLSGHCAPVLACAFSHD--GQMLVSGSVDK 261
Query: 80 QVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVF 131
VI++ +N HT H V + A+AP+ L LA GS D ++++
Sbjct: 262 SVIVYDTNTENI---LHTLTQHTRYVTTCAFAPNTL--LLATGSMDKTVNIW 308
Score = 106 (42.4 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 38/124 (30%), Positives = 56/124 (45%)
Query: 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFG 69
H D V+ A F LAT S D +I++ L + + LK H V ++ P G
Sbjct: 11 HGDDVNCCAFSF--SLLATCSLDKTIRLYSLRDFTELPHSPLKFHTYAVHCCCFS-PS-G 66
Query: 70 SILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNIS 129
ILASCS DG ++W +N A S V ++P LA G++DG +
Sbjct: 67 HILASCSTDGTTVLWN--TENGQMLAVMEQPSGSPVRVCQFSPDST--CLASGAADGTVV 122
Query: 130 VFTA 133
++ A
Sbjct: 123 LWNA 126
Score = 57 (25.1 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 205 LQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW 240
L H+ +V + A+APN L +A+ S D TV IW
Sbjct: 277 LTQHTRYVTTCAFAPNTLL----LATGSMDKTVNIW 308
>UNIPROTKB|E1BB14 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:DAAA02014455 IPI:IPI00703992 RefSeq:NP_001179276.1
UniGene:Bt.16171 ProteinModelPortal:E1BB14
Ensembl:ENSBTAT00000021348 GeneID:513340 KEGG:bta:513340
NextBio:20870819 Uniprot:E1BB14
Length = 340
Score = 111 (44.1 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 32/117 (27%), Positives = 56/117 (47%)
Query: 33 SSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDW 92
S ++++G ++ TL+GH ++ + WA +L S S DG++I+W N
Sbjct: 35 SGLEVVGRVQMRTRR--TLRGHLAKIYAMHWATDS--KLLVSASQDGKLIVWDTYTTN-- 88
Query: 93 TQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATA-DGGWDTTRIDQAH 148
+ H S V + A+AP G +ACG D S+++ + +G +R AH
Sbjct: 89 -KVHAIPLRSSWVMTCAYAPS--GNFVACGGLDNMCSIYSLKSREGNVKVSRELSAH 142
Score = 65 (27.9 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 27/122 (22%), Positives = 50/122 (40%)
Query: 164 GALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGL 223
G + L + + S CD + K+W + G C H + ++ + PN G
Sbjct: 185 GDCMSLAVSPDFRLFISGACDASAKLWDVREGT----CRQTFTGHESDINAICFFPN-G- 238
Query: 224 PKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLL-AVADANNVT 282
I + S D + ++ + ++ + + SV++SL+G LL A D N
Sbjct: 239 --EAICTGSDDASCRLFDLRAD-QELTTYAHESIICGITSVAFSLSGRLLFAGYDDFNCN 295
Query: 283 LW 284
+W
Sbjct: 296 VW 297
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 129 (50.5 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 66/256 (25%), Positives = 102/256 (39%)
Query: 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFG 69
H V+ A G+ L TAS D + + G + + L L GHRGPV ++ P G
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVWG--TKSGRLLWRLAGHRGPVKSCCFS-PD-G 80
Query: 70 SILASCSYDGQVIIWK----------EGNQNDWTQAHTFNDHKSSVNSIAWAPHEL---- 115
++AS S D + +W +G+Q + +F+ + S W +
Sbjct: 81 RLIASSSSDHSIRLWDVARSKCLHVLKGHQRS-VETVSFSPDSKQLASGGWDKRAIVWEV 139
Query: 116 --G--LSLACGSSDG-NISVFTATAD----GGWDTTRIDQAHPVGVTSVSWAPAMAPGAL 166
G + L G D S F+ T+D G WD+T VS+
Sbjct: 140 QSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGN 199
Query: 167 VGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKS 226
+ LAS D T+ VWK + L+ H+ WV S+A++P+ +
Sbjct: 200 ISCLCYSASGLLASGSWDKTICVWKPTTNNLPLQ----LKGHTIWVNSLAFSPD----EL 251
Query: 227 TIASASQDGTVVIWTC 242
+ASA TV +W C
Sbjct: 252 KLASAGYSRTVKVWDC 267
Score = 112 (44.5 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 37/127 (29%), Positives = 62/127 (48%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH V G+ +A++SSD SI++ ++ S H+ LKGH+ V V+++ P
Sbjct: 66 GHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHV--LKGHQRSVETVSFS-PD- 121
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
LAS +D + I+W+ + + H H S+ S ++P SLA GS D +
Sbjct: 122 SKQLASGGWDKRAIVWEVQSGR---RVHLLVGHCDSIQSSDFSP--TSDSLATGSWDSTV 176
Query: 129 SVFTATA 135
++ A
Sbjct: 177 HIWDLRA 183
Score = 62 (26.9 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 27/98 (27%), Positives = 39/98 (39%)
Query: 126 GNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLL--DPVQ-KLASCG 182
GNIS +A G + D+ V + + P G + + L P + KLAS G
Sbjct: 198 GNISCLCYSASGLLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAG 257
Query: 183 CDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPN 220
TVKVW G C L+ D + + P+
Sbjct: 258 YSRTVKVWDCLTG----KCLETLKGMLDVAHACIFTPD 291
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 104 (41.7 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 37/131 (28%), Positives = 58/131 (44%)
Query: 1 MPAQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQ 60
+ + K+ GH+D V + F G R+ + S D+++K+ S + L TL GH G VW
Sbjct: 290 LKSPKVLKGHDDHVI-TCLQFCGNRIVSGSDDNTLKV--WSAVTGKCLRTLVGHTGGVWS 346
Query: 61 VAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLA 120
+I+ S S D + +W N HT H S+V + HE +
Sbjct: 347 SQMRD----NIIISGSTDRTLKVW---NAETGECIHTLYGHTSTVRCMHL--HEK--RVV 395
Query: 121 CGSSDGNISVF 131
GS D + V+
Sbjct: 396 SGSRDATLRVW 406
Score = 90 (36.7 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 33/123 (26%), Positives = 55/123 (44%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH TV M + KR+ + S D+++++ + H+ L GH V V +
Sbjct: 379 GHTSTVR--CMHLHEKRVVSGSRDATLRVWDIETGQCLHV--LMGHVAAVRCVQYD---- 430
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
G + S +YD V +W + T HT H + V S+ + G+ + GS D +I
Sbjct: 431 GRRVVSGAYDFMVKVWDPETE---TCLHTLQGHTNRVYSLQFD----GIHVVSGSLDTSI 483
Query: 129 SVF 131
V+
Sbjct: 484 RVW 486
Score = 80 (33.2 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 34/115 (29%), Positives = 49/115 (42%)
Query: 168 GLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKST 227
G+ L D + L S D+TVK+W + G C LQ + +V L K+
Sbjct: 506 GMELKDNI--LVSGNADSTVKIWDIKTG----QCLQTLQGPNKHQSAVTC---LQFNKNF 556
Query: 228 IASASQDGTVVIWTCAKEGEQWEGRVLKDFKTP---VWSVSWSLTGNLLAVADAN 279
+ ++S DGTV +W K GE V + VW + S T + AV N
Sbjct: 557 VITSSDDGTVKLWDL-KTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRN 610
>UNIPROTKB|I3LSG8 [details] [associations]
symbol:I3LSG8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043531 "ADP binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00931 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GeneTree:ENSGT00700000104017 ProteinModelPortal:I3LSG8
Ensembl:ENSSSCT00000028858 OMA:LRERVAC Uniprot:I3LSG8
Length = 994
Score = 108 (43.1 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 32/117 (27%), Positives = 54/117 (46%)
Query: 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAW-AHPKF 68
H D V+ G+R+A+ +D ++++ + L +K H V A+ A +F
Sbjct: 350 HTDAVYHACFSEDGQRIASCGADKTLQVF--KAETGEKLLEIKAHEDEVLCCAFSADDRF 407
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD 125
+A+CS D +V IW N ++++H VN + + L LA GSSD
Sbjct: 408 ---IATCSVDKKVKIW---NSVTGELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSD 458
Score = 80 (33.2 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 35/116 (30%), Positives = 51/116 (43%)
Query: 177 KLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGT 236
+L S D TVKVW + G + D F H D V S +P+ + +S S D T
Sbjct: 802 RLLSWSFDGTVKVWNIITGRIEKD-FVC---HQDTVLSCDISPDA----TKFSSTSADKT 853
Query: 237 VVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGE 291
IW+ E L+ K V ++S+ LLA D N + +W + +GE
Sbjct: 854 AKIWSFDLLSPLHE---LRGHKGCVRCSAFSVDSTLLATGDDNGEIRIWNVS-NGE 905
Score = 71 (30.1 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 32/117 (27%), Positives = 51/117 (43%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
LA+ D +K+W + N + +C + H++ V ++P+ L +AS S DGT+
Sbjct: 452 LATGSSDYFLKLWDL-N---QKECRNTMFGHTNSVSHCRFSPDDKL----LASCSADGTL 503
Query: 238 VIWTCAKEGEQWEGRVLK----------DFKTPVWSVSWSLTGNLLAVADANNVTLW 284
+W E+ V + D + V SWS G L VA N V L+
Sbjct: 504 KLWDVKSANERKSINVKQFFLNSEESQEDMEVMVKCCSWSADGASLVVAAKNKVLLF 560
Score = 66 (28.3 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 23/82 (28%), Positives = 36/82 (43%)
Query: 176 QKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDG 235
+ + S D+ ++VW W+ + +LQ H + V+ N S + S S DG
Sbjct: 761 KNVISSSDDSAIQVWN-----WQSEETVSLQAHQETVKDFRLLKN-----SRLLSWSFDG 810
Query: 236 TVVIWTCAKEGEQWEGRVLKDF 257
TV +W GR+ KDF
Sbjct: 811 TVKVWNIIT------GRIEKDF 826
Score = 59 (25.8 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 178 LASCGCDN-TVKVWKMYNGIWKMDCFPAL-----QMHSDWVRSVAWAPN 220
L + G DN +++W + NG C P L H WV + ++P+
Sbjct: 886 LLATGDDNGEIRIWNVSNGELLHSCAPVLVEGGAATHGGWVTDLRFSPD 934
>UNIPROTKB|F1MRF3 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525
EMBL:DAAA02004471 IPI:IPI00702869 RefSeq:XP_002685394.1
UniGene:Bt.105170 ProteinModelPortal:F1MRF3
Ensembl:ENSBTAT00000005476 GeneID:783784 KEGG:bta:783784
NextBio:20926301 Uniprot:F1MRF3
Length = 476
Score = 119 (46.9 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 48/181 (26%), Positives = 77/181 (42%)
Query: 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFG 69
H VH G LA+ S+D + + N Q LA ++ G +V P
Sbjct: 53 HTYAVHCCCFSPSGHILASCSTDGTTVLWDTQNG--QILAVMEQPSGSPVRVCRFSPD-S 109
Query: 70 SILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNIS 129
+ L S + DG V++W N + + S+ + A+ P G GSS G+++
Sbjct: 110 TCLVSGASDGTVVLW---NAQSYKLHRCASVKDGSLVACAFFPP--GNLFVTGSSCGDLT 164
Query: 130 VFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKV 189
V+ D ++AH +G+T ++ PG GL +LASCG D +K+
Sbjct: 165 VW----DDKMRCLHSEKAHDLGITCCDFSSQPVPGGERGLQFF----QLASCGQDCQIKI 216
Query: 190 W 190
W
Sbjct: 217 W 217
Score = 108 (43.1 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 39/124 (31%), Positives = 56/124 (45%)
Query: 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFG 69
H D V+ A F LAT + D +I++ LS+ + LK H V ++ P G
Sbjct: 11 HNDDVNCCA--FSSSLLATCALDKTIRLYFLSDFTEVPYSPLKFHTYAVHCCCFS-PS-G 66
Query: 70 SILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNIS 129
ILASCS DG ++W QN A S V ++P L G+SDG +
Sbjct: 67 HILASCSTDGTTVLWD--TQNGQILAVMEQPSGSPVRVCRFSPDST--CLVSGASDGTVV 122
Query: 130 VFTA 133
++ A
Sbjct: 123 LWNA 126
Score = 60 (26.2 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 205 LQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW 240
L H+ +V + A+APN+ L +A+ S D TV IW
Sbjct: 277 LTQHTRYVTTCAFAPNILL----LATGSMDKTVNIW 308
>ZFIN|ZDB-GENE-040426-2044 [details] [associations]
symbol:cdc20 "cell division cycle 20 homolog"
species:7955 "Danio rerio" [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-2044 GO:GO:0051301
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 HSSP:P16649 KO:K03363 CTD:991 HOVERGEN:HBG001024
EMBL:BC054907 IPI:IPI00611755 RefSeq:NP_998245.1 UniGene:Dr.105018
ProteinModelPortal:Q7SYD7 STRING:Q7SYD7 GeneID:406353
KEGG:dre:406353 InParanoid:Q7SYD7 NextBio:20817971
ArrayExpress:Q7SYD7 Uniprot:Q7SYD7
Length = 496
Score = 114 (45.2 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 32/117 (27%), Positives = 58/117 (49%)
Query: 44 ASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKS 103
A H+ T GH V + W+ P G LAS D + IW ++ H ++H+
Sbjct: 299 ADHHIFTFGGHTQEVCGLTWS-PD-GRYLASGGNDNMMYIWPMTTGSENQAIHALSEHQG 356
Query: 104 SVNSIAWAPHELGLSLACG-SSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAP 159
+V ++AW P + + + G +SD +I ++ A++ G + +D V +S+ +AP
Sbjct: 357 AVKALAWCPWQPNIPASGGGTSDRHIRIWNASS--GSCISSLDTCSQV--SSLVFAP 409
Score = 66 (28.3 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 22/69 (31%), Positives = 33/69 (47%)
Query: 196 IWKMDCFPALQMHSDWVRSVAWAPNLGL-PK-STIASASQDGTVVIWTC-------AKEG 246
IWK F + H + NL L P ST+AS + D T+ +W C AK+
Sbjct: 427 IWKYPSFAKVTEHEGHEARIL---NLALSPDGSTLASIAADETIRLWKCFEKEKDAAKKP 483
Query: 247 EQWEGRVLK 255
+Q GR+++
Sbjct: 484 KQASGRIIQ 492
Score = 49 (22.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 166 LVGLGLLDPVQKLASCGCDNTVKVWKMY 193
++ L L LAS D T+++WK +
Sbjct: 446 ILNLALSPDGSTLASIAADETIRLWKCF 473
>UNIPROTKB|H9L0T1 [details] [associations]
symbol:CIAO1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016226 "iron-sulfur cluster assembly" evidence=IEA]
[GO:0071817 "MMXD complex" evidence=IEA] [GO:0097361 "CIA complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104486 OMA:EEEYECV EMBL:AADN02064069
ProteinModelPortal:H9L0T1 Ensembl:ENSGALT00000028398 Uniprot:H9L0T1
Length = 225
Score = 130 (50.8 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 57/226 (25%), Positives = 89/226 (39%)
Query: 26 LATASSDSSIKIIGLSNSASQH-LATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIW 84
LAT S D S+ + + + ++ L H V V W HP +LAS SYD V ++
Sbjct: 3 LATCSRDKSVWVWDVDDEEEYECVSVLNSHTQDVKHVVW-HPN-QELLASASYDDTVKLY 60
Query: 85 KEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRI 144
E ++DW T H+S+V S+A+ G LA S D + ++ G +
Sbjct: 61 HE-EEDDWVCCATLEGHESTVWSVAFDGS--GERLASCSDDKTVRIWQCYRPGNEEGVAC 117
Query: 145 DQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLAS-CGCDNTVKVWK--MYNGIWKMDC 201
P V + + LA+ CG D+ ++V++ + +
Sbjct: 118 SGTDPTW-KCVCNLSGYHTRTIYDVSWCRLTGALATACG-DDAIRVFEESTSSSPQQQQQ 175
Query: 202 FPALQM-------HSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW 240
P + HS V VAW P +AS S DG + W
Sbjct: 176 QPTFSLTAHVPRAHSQDVNCVAWNPK---EPGLLASCSDDGEIAFW 218
Score = 128 (50.1 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 36/110 (32%), Positives = 58/110 (52%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
LA+C D +V VW + + + +C L H+ V+ V W PN L +ASAS D TV
Sbjct: 3 LATCSRDKSVWVWDV-DDEEEYECVSVLNSHTQDVKHVVWHPNQEL----LASASYDDTV 57
Query: 238 VIWTCAKEGEQWEG-RVLKDFKTPVWSVSWSLTGNLLA-VADANNVTLWK 285
++ +E + W L+ ++ VWSV++ +G LA +D V +W+
Sbjct: 58 KLYH--EEEDDWVCCATLEGHESTVWSVAFDGSGERLASCSDDKTVRIWQ 105
Score = 117 (46.2 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 54/197 (27%), Positives = 77/197 (39%)
Query: 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFG 69
H V V + LA+AS D ++K+ ATL+GH VW VA+ G
Sbjct: 32 HTQDVKHVVWHPNQELLASASYDDTVKLYHEEEDDWVCCATLEGHESTVWSVAFDGS--G 89
Query: 70 SILASCSYDGQVIIW---KEGNQND---------WTQAHTFND-HKSSVNSIAWAPHELG 116
LASCS D V IW + GN+ W + H ++ ++W
Sbjct: 90 ERLASCSDDKTVRIWQCYRPGNEEGVACSGTDPTWKCVCNLSGYHTRTIYDVSWCRLTGA 149
Query: 117 LSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQ 176
L+ ACG D I VF + + + Q P + + P A V +P +
Sbjct: 150 LATACG--DDAIRVFEESTSS---SPQQQQQQPT-FSLTAHVPR-AHSQDVNCVAWNPKE 202
Query: 177 K--LASCGCDNTVKVWK 191
LASC D + WK
Sbjct: 203 PGLLASCSDDGEIAFWK 219
>UNIPROTKB|Q8N9V3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:AC009307 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ EMBL:AK093494 EMBL:AC008277 EMBL:BC029520
IPI:IPI00167822 IPI:IPI00477952 RefSeq:NP_001121684.1
RefSeq:NP_689741.2 UniGene:Hs.20848 ProteinModelPortal:Q8N9V3
SMR:Q8N9V3 PhosphoSite:Q8N9V3 DMDM:229463016 PaxDb:Q8N9V3
PRIDE:Q8N9V3 Ensembl:ENST00000358147 Ensembl:ENST00000359774
Ensembl:ENST00000392796 Ensembl:ENST00000409990 GeneID:151525
KEGG:hsa:151525 UCSC:uc010foo.3 CTD:151525 GeneCards:GC02M160092
HGNC:HGNC:26697 HPA:HPA036840 neXtProt:NX_Q8N9V3
PharmGKB:PA128394761 InParanoid:Q8N9V3 OMA:HCCCFSP PhylomeDB:Q8N9V3
GenomeRNAi:151525 NextBio:86717 ArrayExpress:Q8N9V3 Bgee:Q8N9V3
CleanEx:HS_WDSUB1 Genevestigator:Q8N9V3 Uniprot:Q8N9V3
Length = 476
Score = 121 (47.7 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 48/181 (26%), Positives = 78/181 (43%)
Query: 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFG 69
H VH G LA+ S+D + + N Q LA ++ G +V P
Sbjct: 53 HTYAVHCCCFSPSGHILASCSTDGTTVLWNTENG--QMLAVMEQPSGSPVRVCQFSPD-S 109
Query: 70 SILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNIS 129
+ LAS + DG V++W N + + S+ + A++P+ G GSS G+++
Sbjct: 110 TCLASGAADGTVVLW---NAQSYKLYRCGSVKDGSLAACAFSPN--GSFFVTGSSCGDLT 164
Query: 130 VFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKV 189
V+ D ++AH +G+T ++ GL +LASCG D VK+
Sbjct: 165 VW----DDKMRCPHSEKAHDLGITCCDFSSQPVSDGEQGLQFF----RLASCGQDCQVKI 216
Query: 190 W 190
W
Sbjct: 217 W 217
Score = 117 (46.2 bits), Expect = 0.00040, P = 0.00040
Identities = 36/112 (32%), Positives = 55/112 (49%)
Query: 25 RLATASSDSSIKI--IGLSNSASQHL---ATLKGHRGPVWQVAWAHPKFGSILASCSYDG 79
RLA+ D +KI + ++ L +TL GH PV A++H G +L S S D
Sbjct: 204 RLASCGQDCQVKIWIVSFTHILGFELKYKSTLSGHCAPVLACAFSHD--GQMLVSGSVDK 261
Query: 80 QVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVF 131
VI++ +N HT H V + A+AP+ L LA GS D ++++
Sbjct: 262 SVIVYDTNTENI---LHTLTQHTRYVTTCAFAPNTL--LLATGSMDKTVNIW 308
Score = 106 (42.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 38/124 (30%), Positives = 56/124 (45%)
Query: 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFG 69
H D V+ A F LAT S D +I++ L + + LK H V ++ P G
Sbjct: 11 HGDDVNCCAFSF--SLLATCSLDKTIRLYSLRDFTELPHSPLKFHTYAVHCCCFS-PS-G 66
Query: 70 SILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNIS 129
ILASCS DG ++W +N A S V ++P LA G++DG +
Sbjct: 67 HILASCSTDGTTVLWN--TENGQMLAVMEQPSGSPVRVCQFSPDST--CLASGAADGTVV 122
Query: 130 VFTA 133
++ A
Sbjct: 123 LWNA 126
Score = 57 (25.1 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 205 LQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW 240
L H+ +V + A+APN L +A+ S D TV IW
Sbjct: 277 LTQHTRYVTTCAFAPNTLL----LATGSMDKTVNIW 308
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 104 (41.7 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 37/131 (28%), Positives = 58/131 (44%)
Query: 1 MPAQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQ 60
+ + K+ GH+D V + F G R+ + S D+++K+ S + L TL GH G VW
Sbjct: 370 LKSPKVLKGHDDHVI-TCLQFCGNRIVSGSDDNTLKV--WSAVTGKCLRTLVGHTGGVWS 426
Query: 61 VAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLA 120
+I+ S S D + +W N HT H S+V + HE +
Sbjct: 427 SQMRD----NIIISGSTDRTLKVW---NAETGECIHTLYGHTSTVRCMHL--HEK--RVV 475
Query: 121 CGSSDGNISVF 131
GS D + V+
Sbjct: 476 SGSRDATLRVW 486
Score = 90 (36.7 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 33/123 (26%), Positives = 55/123 (44%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH TV M + KR+ + S D+++++ + H+ L GH V V +
Sbjct: 459 GHTSTVR--CMHLHEKRVVSGSRDATLRVWDIETGQCLHV--LMGHVAAVRCVQYD---- 510
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
G + S +YD V +W + T HT H + V S+ + G+ + GS D +I
Sbjct: 511 GRRVVSGAYDFMVKVWDPETE---TCLHTLQGHTNRVYSLQFD----GIHVVSGSLDTSI 563
Query: 129 SVF 131
V+
Sbjct: 564 RVW 566
Score = 80 (33.2 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 34/115 (29%), Positives = 49/115 (42%)
Query: 168 GLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKST 227
G+ L D + L S D+TVK+W + G C LQ + +V L K+
Sbjct: 586 GMELKDNI--LVSGNADSTVKIWDIKTG----QCLQTLQGPNKHQSAVTC---LQFNKNF 636
Query: 228 IASASQDGTVVIWTCAKEGEQWEGRVLKDFKTP---VWSVSWSLTGNLLAVADAN 279
+ ++S DGTV +W K GE V + VW + S T + AV N
Sbjct: 637 VITSSDDGTVKLWDL-KTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRN 690
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 104 (41.7 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 37/131 (28%), Positives = 58/131 (44%)
Query: 1 MPAQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQ 60
+ + K+ GH+D V + F G R+ + S D+++K+ S + L TL GH G VW
Sbjct: 375 LKSPKVLKGHDDHVI-TCLQFCGNRIVSGSDDNTLKV--WSAVTGKCLRTLVGHTGGVWS 431
Query: 61 VAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLA 120
+I+ S S D + +W N HT H S+V + HE +
Sbjct: 432 SQMRD----NIIISGSTDRTLKVW---NAETGECIHTLYGHTSTVRCMHL--HEK--RVV 480
Query: 121 CGSSDGNISVF 131
GS D + V+
Sbjct: 481 SGSRDATLRVW 491
Score = 90 (36.7 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 33/123 (26%), Positives = 55/123 (44%)
Query: 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKF 68
GH TV M + KR+ + S D+++++ + H+ L GH V V +
Sbjct: 464 GHTSTVR--CMHLHEKRVVSGSRDATLRVWDIETGQCLHV--LMGHVAAVRCVQYD---- 515
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128
G + S +YD V +W + T HT H + V S+ + G+ + GS D +I
Sbjct: 516 GRRVVSGAYDFMVKVWDPETE---TCLHTLQGHTNRVYSLQFD----GIHVVSGSLDTSI 568
Query: 129 SVF 131
V+
Sbjct: 569 RVW 571
Score = 80 (33.2 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 34/115 (29%), Positives = 49/115 (42%)
Query: 168 GLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKST 227
G+ L D + L S D+TVK+W + G C LQ + +V L K+
Sbjct: 591 GMELKDNI--LVSGNADSTVKIWDIKTG----QCLQTLQGPNKHQSAVTC---LQFNKNF 641
Query: 228 IASASQDGTVVIWTCAKEGEQWEGRVLKDFKTP---VWSVSWSLTGNLLAVADAN 279
+ ++S DGTV +W K GE V + VW + S T + AV N
Sbjct: 642 VITSSDDGTVKLWDL-KTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRN 695
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 128 (50.1 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 52/191 (27%), Positives = 89/191 (46%)
Query: 1 MPAQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQ 60
+ ++ TGH+ V+D A K + TAS D ++KI + + TLKGH V+
Sbjct: 111 LSCERTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTV--KMAKTLKGHTNYVFC 168
Query: 61 VAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLA 120
+ +P+ S++ S S+D V IW + T H V+++++ + G +
Sbjct: 169 CNF-NPQ-SSLVVSGSFDESVRIW---DVRTGMCVKTLPAHSDPVSAVSF--NRDGSLIT 221
Query: 121 CGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLAS 180
GS DG + ++ TA+G T +D +P V V ++P G + LD KL
Sbjct: 222 SGSYDGLVRIWD-TANGQCVKTLVDDENPP-VAFVKFSPN---GKYILSSNLDNTLKLWD 276
Query: 181 CGCDNTVKVWK 191
G T+K ++
Sbjct: 277 FGKGKTLKQYQ 287
Score = 45 (20.9 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 174 PVQKLASCGC---DNTVKVWK 191
P+Q + + G DNT+++W+
Sbjct: 345 PMQNMIASGALEPDNTIRIWR 365
>RGD|1359296 [details] [associations]
symbol:Wdsub1 "WD repeat, sterile alpha motif and U-box domain
containing 1" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 RGD:1359296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:BC089856
IPI:IPI00391796 RefSeq:NP_001014201.1 UniGene:Rn.101918
ProteinModelPortal:Q5FVN8 PRIDE:Q5FVN8 Ensembl:ENSRNOT00000008168
GeneID:362137 KEGG:rno:362137 UCSC:RGD:1359296 InParanoid:Q5FVN8
NextBio:678784 ArrayExpress:Q5FVN8 Genevestigator:Q5FVN8
Uniprot:Q5FVN8
Length = 476
Score = 136 (52.9 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 78/294 (26%), Positives = 134/294 (45%)
Query: 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRG--PVWQVAWAHPK 67
H VH + G LA+ S+D + L ++ S H T+ G PV +V P
Sbjct: 53 HTYAVHCCSFSPSGHVLASCSTDGTTV---LWSAHSGHTLTVLEQPGGSPV-RVCCFSPD 108
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGN 127
+ LAS + DG V++W N + + + SS+ + A++P + GL L GSS G+
Sbjct: 109 -STYLASGAADGSVVLW---NAHSYKLYRCGSVKDSSLVACAFSP-DGGL-LVTGSSGGD 162
Query: 128 ISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTV 187
++V+ D ++AH +G+T S++ G GL L +LASCG D +
Sbjct: 163 LTVW----DDRMRCLHSEKAHDLGITCCSFSSQPLSGGEHGLQLY----RLASCGQDCEI 214
Query: 188 KVWKM-YNGI--WKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAK 244
K+W + + + +++ L H V + A++ + G +AS S D +V+I+
Sbjct: 215 KLWVVSFTRVLGFELKYRSTLSGHCAPVLACAFSHD-G---QMLASGSVDKSVIIYDI-- 268
Query: 245 EGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSV 297
G Q L V + +++ LLA + V +W+ ++ Q SV
Sbjct: 269 -GTQSVLHTLTQHTRYVTTCAFAPNTLLLATGSMDKTVNIWQFDLETPCQAGSV 321
>UNIPROTKB|F1SLU8 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:NMCSIYS EMBL:FP325257
Ensembl:ENSSSCT00000000743 Uniprot:F1SLU8
Length = 340
Score = 111 (44.1 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 32/117 (27%), Positives = 56/117 (47%)
Query: 33 SSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDW 92
S ++++G ++ TL+GH ++ + WA +L S S DG++I+W N
Sbjct: 35 SGLEVVGRVQMRTRR--TLRGHLAKIYAMHWATDS--KLLVSASQDGKLIVWDTYTTN-- 88
Query: 93 TQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATA-DGGWDTTRIDQAH 148
+ H S V + A+AP G +ACG D S+++ + +G +R AH
Sbjct: 89 -KVHAIPLRSSWVMTCAYAPS--GNFVACGGLDNMCSIYSLKSREGNVKVSRELSAH 142
Score = 63 (27.2 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 28/115 (24%), Positives = 49/115 (42%)
Query: 172 LDPVQKLASCG-CDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIAS 230
+ P KL G CD + K+W + G C H + ++ + PN G I +
Sbjct: 192 VSPDFKLFISGACDASAKLWDVREGT----CRQTFTGHESDINAICFFPN-G---EAICT 243
Query: 231 ASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLL-AVADANNVTLW 284
S D + ++ + ++ + + SV++SL+G LL A D N +W
Sbjct: 244 GSDDASCRLFDLRAD-QELTTYSHESIICGITSVAFSLSGRLLFAGYDDFNCNVW 297
>UNIPROTKB|I3L616 [details] [associations]
symbol:ELP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046425 "regulation of JAK-STAT cascade" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005794 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0046425 CTD:55250 GeneTree:ENSGT00390000000916 KO:K11374
OMA:DCLIRIW EMBL:FP312720 EMBL:FP325286 RefSeq:XP_003356461.1
Ensembl:ENSSSCT00000026023 GeneID:100621519 KEGG:ssc:100621519
Uniprot:I3L616
Length = 826
Score = 113 (44.8 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 42/175 (24%), Positives = 70/175 (40%)
Query: 26 LATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPK------FGSILASCSYDG 79
L + SD+ + + N+ L GH GP++ V + K F +++ S + D
Sbjct: 78 LVSGGSDNQVIHWEIENNQLLKAVHLPGHEGPIYAVHAVYQKRASDTAFRTLIVSAASDS 137
Query: 80 QVIIW-KEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGG 138
V +W K+G + Q F + + +++ P LACG D I +F D
Sbjct: 138 TVRVWSKQGFEVTCLQTLNFGNGFTLALCLSFLPDTDVPILACGDDDCKIHLFVQQNDQ- 196
Query: 139 WDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMY 193
+ H + V WA G L LA+C D +++WK+Y
Sbjct: 197 FQNVLFLSGHEDWIRGVEWAA-------FGRDLF-----LATCSQDCLIRIWKLY 239
Score = 71 (30.1 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 20/72 (27%), Positives = 33/72 (45%)
Query: 184 DNTVKVWKMYNGI-WKMDCFPALQMHSDWVRSVAWAPNL---GLPKSTIA--SASQDGTV 237
+NT + N I + + L H +WV +V W P G+ + + SAS D T+
Sbjct: 257 ENTFAIENESNKIAFAVTLETVLAGHENWVNAVHWQPPFYKDGVLQQPVRLLSASMDKTM 316
Query: 238 VIWTCAKEGEQW 249
++W +E W
Sbjct: 317 ILWAPDEESGVW 328
>MGI|MGI:1889642 [details] [associations]
symbol:Elp2 "elongator acetyltransferase complex subunit 2"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008023
"transcription elongation factor complex" evidence=ISO] [GO:0019901
"protein kinase binding" evidence=IDA] [GO:0033588 "Elongator
holoenzyme complex" evidence=ISO] [GO:0046425 "regulation of
JAK-STAT cascade" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1889642 GO:GO:0005794
GO:GO:0019901 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0000502 GO:GO:0061133
GO:GO:0043248 GO:GO:0006368 GO:GO:0008023 GO:GO:0046425
GO:GO:0033588 CTD:55250 GeneTree:ENSGT00390000000916
HOGENOM:HOG000200623 HOVERGEN:HBG087208 KO:K11374 OrthoDB:EOG40K7Z8
OMA:DCLIRIW EMBL:AF291064 EMBL:AK033246 EMBL:AK034457 EMBL:AK050960
EMBL:AK147826 EMBL:AK167725 EMBL:AK167853 EMBL:AK168370
EMBL:BC015284 EMBL:BC051943 IPI:IPI00461189 IPI:IPI00653141
RefSeq:NP_067423.2 UniGene:Mm.25298 ProteinModelPortal:Q91WG4
SMR:Q91WG4 STRING:Q91WG4 PhosphoSite:Q91WG4 PaxDb:Q91WG4
PRIDE:Q91WG4 Ensembl:ENSMUST00000025120 GeneID:58523 KEGG:mmu:58523
UCSC:uc008egx.1 UCSC:uc012baj.1 InParanoid:Q91WG4 NextBio:314342
Bgee:Q91WG4 CleanEx:MM_ELP2 Genevestigator:Q91WG4
GermOnline:ENSMUSG00000024271 Uniprot:Q91WG4
Length = 831
Score = 111 (44.1 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 47/175 (26%), Positives = 72/175 (41%)
Query: 26 LATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAH---PKFG---SILASCSYDG 79
L + SD+ + L N+ L+GH GPV V + P G +++AS + D
Sbjct: 78 LVSGGSDNRVIHWELENNQVLKSVRLQGHEGPVCAVHAIYQSGPSEGEQHALIASAASDS 137
Query: 80 QVIIW-KEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGG 138
V IW K+G++ + Q +F D +A P LACG D I ++ D
Sbjct: 138 TVRIWSKKGSEVKYLQTLSFRDGFVLSVCLAILPGTNVPVLACGDDDCRIHLYIQQDDQF 197
Query: 139 WDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMY 193
+ H + V WA G L LASC D +++W++Y
Sbjct: 198 QKALSLC-GHEDWIRGVEWAT-------FGRDLF-----LASCSQDCLIRIWRLY 239
Score = 73 (30.8 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 208 HSDWVRSVAWAPNL---GLPKSTIA--SASQDGTVVIWTCAKEGEQW 249
H +WV +V W P+ G+ + + SAS D T+++W +E W
Sbjct: 281 HENWVNAVHWQPSFYKDGVLQQPVRLLSASMDKTMILWAPDEESGVW 327
>UNIPROTKB|F1SQT5 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043531 "ADP binding" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 OMA:KVCKNSA InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:FP102239 EMBL:CU633605
RefSeq:XP_003481790.1 Ensembl:ENSSSCT00000000968
Ensembl:ENSSSCT00000033603 GeneID:100513283 KEGG:ssc:100513283
Uniprot:F1SQT5
Length = 1249
Score = 108 (43.1 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 32/117 (27%), Positives = 54/117 (46%)
Query: 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAW-AHPKF 68
H D V+ G+R+A+ +D ++++ + L +K H V A+ A +F
Sbjct: 614 HTDAVYHACFSEDGQRIASCGADKTLQVF--KAETGEKLLEIKAHEDEVLCCAFSADDRF 671
Query: 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD 125
+A+CS D +V IW N ++++H VN + + L LA GSSD
Sbjct: 672 ---IATCSVDKKVKIW---NSVTGELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSD 722
Score = 80 (33.2 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 35/116 (30%), Positives = 51/116 (43%)
Query: 177 KLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGT 236
+L S D TVKVW + G + D F H D V S +P+ + +S S D T
Sbjct: 1057 RLLSWSFDGTVKVWNIITGRIEKD-FVC---HQDTVLSCDISPDA----TKFSSTSADKT 1108
Query: 237 VVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGE 291
IW+ E L+ K V ++S+ LLA D N + +W + +GE
Sbjct: 1109 AKIWSFDLLSPLHE---LRGHKGCVRCSAFSVDSTLLATGDDNGEIRIWNVS-NGE 1160
Score = 71 (30.1 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 32/117 (27%), Positives = 51/117 (43%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
LA+ D +K+W + N + +C + H++ V ++P+ L +AS S DGT+
Sbjct: 716 LATGSSDYFLKLWDL-N---QKECRNTMFGHTNSVSHCRFSPDDKL----LASCSADGTL 767
Query: 238 VIWTCAKEGEQWEGRVLK----------DFKTPVWSVSWSLTGNLLAVADANNVTLW 284
+W E+ V + D + V SWS G L VA N V L+
Sbjct: 768 KLWDVKSANERKSINVKQFFLNSEESQEDMEVMVKCCSWSADGASLVVAAKNKVLLF 824
Score = 66 (28.3 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 23/82 (28%), Positives = 36/82 (43%)
Query: 176 QKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDG 235
+ + S D+ ++VW W+ + +LQ H + V+ N S + S S DG
Sbjct: 1016 KNVISSSDDSAIQVWN-----WQSEETVSLQAHQETVKDFRLLKN-----SRLLSWSFDG 1065
Query: 236 TVVIWTCAKEGEQWEGRVLKDF 257
TV +W GR+ KDF
Sbjct: 1066 TVKVWNIIT------GRIEKDF 1081
Score = 59 (25.8 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 178 LASCGCDN-TVKVWKMYNGIWKMDCFPAL-----QMHSDWVRSVAWAPN 220
L + G DN +++W + NG C P L H WV + ++P+
Sbjct: 1141 LLATGDDNGEIRIWNVSNGELLHSCAPVLVEGGAATHGGWVTDLRFSPD 1189
Score = 58 (25.5 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 16/58 (27%), Positives = 29/58 (50%)
Query: 187 VKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAK 244
V++W M + + DC + H WV ++P+ G S+ ++S D T+ +W K
Sbjct: 864 VELWNMDSCLKVADC----RGHLSWVHCAMFSPD-G---SSFLTSSDDETIRLWETKK 913
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 132 (51.5 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 36/131 (27%), Positives = 64/131 (48%)
Query: 2 PAQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQV 61
P K+ GH+ V+ + G+ +ATAS DSS+++ + LATL+GH V+Q
Sbjct: 381 PITKMH-GHQKVVNHASFSPDGRCIATASFDSSVRL--WDGKTGKFLATLRGHVAAVYQC 437
Query: 62 AWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLAC 121
AW+ +L S S D + +W ++ H+ V ++ W+P G +A
Sbjct: 438 AWSTDS--RLLVSSSQDTTLKVWDVRSKK---MKFDLPGHEDQVFAVDWSPD--GQRVAS 490
Query: 122 GSSDGNISVFT 132
G +D + +++
Sbjct: 491 GGADKAVRIWS 501
Score = 117 (46.2 bits), Expect = 0.00043, P = 0.00043
Identities = 60/202 (29%), Positives = 89/202 (44%)
Query: 49 ATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSI 108
A++ GH G + ++ P S L + S D +W Q T T H + V+ +
Sbjct: 128 ASMNGHDGTIISAQFS-PSTSSRLVTGSGDFTARLWDCDTQ---TPIATMKGHTNWVSCV 183
Query: 109 AWAPHELGLSLACGSSDGNISVFTATADGG--WDTTRIDQAHPVGVTSVSWAPA-MAPGA 165
AWAP + + +A GS D I F G D R H + ++ W P +AP +
Sbjct: 184 AWAP-DASI-IATGSMDNTIR-FWDPKKGSPIGDALR---RHTKPIMALCWQPLHLAPDS 237
Query: 166 LVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPK 225
G LL AS DNTV++W N + F L H+ + V W G +
Sbjct: 238 --GPYLL------ASGSKDNTVRIW---NVKLRTLLF-TLSGHTAPITCVRWG---G--Q 280
Query: 226 STIASASQDGTVVIWTCAKEGE 247
+ I S+S D T+ IW AK+G+
Sbjct: 281 NWIYSSSYDKTIRIWD-AKDGK 301
Score = 104 (41.7 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 43/158 (27%), Positives = 63/158 (39%)
Query: 9 GHEDTVHDVAMD-FYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPK 67
GH+ T+ RL T S D + ++ +AT+KGH V VAWA P
Sbjct: 132 GHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTP--IATMKGHTNWVSCVAWA-PD 188
Query: 68 FGSILASCSYDGQVIIW--KEGNQ-NDWTQAHTFNDHKSSVNSIAWAPHELGLS-----L 119
SI+A+ S D + W K+G+ D + HT + ++ W P L L
Sbjct: 189 -ASIIATGSMDNTIRFWDPKKGSPIGDALRRHT-----KPIMALCWQPLHLAPDSGPYLL 242
Query: 120 ACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSW 157
A GS D + ++ T H +T V W
Sbjct: 243 ASGSKDNTVRIWNVKLRTLLFTL---SGHTAPITCVRW 277
Score = 75 (31.5 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 23/64 (35%), Positives = 31/64 (48%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
L S D T+KVW + + K D P H D V +V W+P+ G +AS D V
Sbjct: 446 LVSSSQDTTLKVWDVRSKKMKFD-LPG---HEDQVFAVDWSPD-G---QRVASGGADKAV 497
Query: 238 VIWT 241
IW+
Sbjct: 498 RIWS 501
Score = 55 (24.4 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 24/83 (28%), Positives = 39/83 (46%)
Query: 203 PALQMHSDW--VRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTP 260
P +MH V +++P+ G IA+AS D +V +W K G+ L+
Sbjct: 381 PITKMHGHQKVVNHASFSPD-G---RCIATASFDSSVRLWD-GKTGKFLA--TLRGHVAA 433
Query: 261 VWSVSWSLTGNLLAVADANNVTL 283
V+ +WS LL V+ + + TL
Sbjct: 434 VYQCAWSTDSRLL-VSSSQDTTL 455
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 123 (48.4 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 37/127 (29%), Positives = 58/127 (45%)
Query: 5 KIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWA 64
K+ GH+D V + F G R+ + S D+++K+ N L TL GH G VW +
Sbjct: 988 KVLKGHDDHVI-TCLQFSGNRIVSGSDDNTLKVWSAVNGKC--LRTLVGHTGGVWSSQMS 1044
Query: 65 HPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSS 124
G+I+ S S D + +W + + HT H S+V + H G + GS
Sbjct: 1045 ----GNIIISGSTDRTLKVW---DMDSGACVHTLQGHTSTVRCM----HLHGSKVVSGSR 1093
Query: 125 DGNISVF 131
D + V+
Sbjct: 1094 DATLRVW 1100
Score = 64 (27.6 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 29/105 (27%), Positives = 41/105 (39%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
L S D+TVKVW + G C L + +V L + ++S DGTV
Sbjct: 1208 LVSGNADSTVKVWDITTG----QCLQTLSGPNKHHSAVTC---LQFNSRFVVTSSDDGTV 1260
Query: 238 VIWTCAKEGEQWEGRVLKDFKTP---VWSVSWSLTGNLLAVADAN 279
+W K G+ V D VW + + T + AV N
Sbjct: 1261 KLWD-VKTGDFIRNLVALDSGGSGGVVWRIRANDTKLICAVGSRN 1304
Score = 48 (22.0 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 20/64 (31%), Positives = 26/64 (40%)
Query: 177 KLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGT 236
K+ S D T++VW + G C L H VR V + L I S + D
Sbjct: 1087 KVVSGSRDATLRVWDIEQG----SCLHVLVGHLAAVRCVQYDGKL------IVSGAYDYM 1136
Query: 237 VVIW 240
V IW
Sbjct: 1137 VKIW 1140
Score = 46 (21.3 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 14/63 (22%), Positives = 25/63 (39%)
Query: 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237
+ S D +++VW + G +C L H + N+ + S + D TV
Sbjct: 1168 VVSGSLDTSIRVWDVETG----NCKHTLMGHQSLTSGMELRQNI------LVSGNADSTV 1217
Query: 238 VIW 240
+W
Sbjct: 1218 KVW 1220
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 109 (43.4 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 32/121 (26%), Positives = 59/121 (48%)
Query: 5 KIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWA 64
K+ H + +VA++ G T S D + K+ ++ + L TL+GHR V+ +A+
Sbjct: 86 KVLRAHILPLTNVALNKSGSCFITGSYDRTCKL--WDTASGEELHTLEGHRNVVYAIAFN 143
Query: 65 HPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSS 124
+P +G +A+ S+D +W + HTF H + + +++ P +A GS
Sbjct: 144 NP-YGDKIATGSFDKTCKLWSVETGKCY---HTFRGHTAEIVCLSFNPQST--LVATGSM 197
Query: 125 D 125
D
Sbjct: 198 D 198
Score = 67 (28.6 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 32/118 (27%), Positives = 48/118 (40%)
Query: 184 DNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWT-- 241
D T K+W NG C L H D + + IA+AS DGT I++
Sbjct: 282 DKTCKLWDAVNG----KCVATLTGHDDEILDSCF----DYTGKLIATASADGTARIFSAA 333
Query: 242 ---CAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANNVT-LWKEAVDGEWQQV 295
C + E EG + K +S++ GN L ++ +W +A G+ QV
Sbjct: 334 TRECVTKLEGHEGEISK--------ISFNPQGNRLLTGSSDKTARIW-DAQTGQCLQV 382
>UNIPROTKB|P62871 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9913 "Bos taurus"
[GO:0071380 "cellular response to prostaglandin E stimulus"
evidence=IDA] [GO:0071870 "cellular response to catecholamine
stimulus" evidence=IDA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IDA] [GO:0005622 "intracellular" evidence=IDA]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 EMBL:X03073
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0060041
GO:GO:0007200 GO:GO:0007191 GO:GO:0071870 GO:GO:0071380 PDB:1OMW
PDB:2BCJ PDB:3PSC PDB:3PVU PDB:3PVW PDB:3UZS PDBsum:1OMW
PDBsum:2BCJ PDBsum:3PSC PDBsum:3PVU PDBsum:3PVW PDBsum:3UZS
PDB:3CIK PDB:3KRW PDB:3KRX PDB:3V5W PDBsum:3CIK PDBsum:3KRW
PDBsum:3KRX PDBsum:3V5W GO:GO:0001750 PRINTS:PR00319 GO:GO:0050909
GO:GO:0005834 EMBL:M13236 EMBL:BC105260 IPI:IPI00703160 PIR:A24225
RefSeq:NP_786971.2 UniGene:Bt.57702 PDB:1A0R PDB:1B9X PDB:1B9Y
PDB:1GG2 PDB:1GOT PDB:1GP2 PDB:1TBG PDB:1XHM PDB:2TRC PDB:3AH8
PDBsum:1A0R PDBsum:1B9X PDBsum:1B9Y PDBsum:1GG2 PDBsum:1GOT
PDBsum:1GP2 PDBsum:1TBG PDBsum:1XHM PDBsum:2TRC PDBsum:3AH8
ProteinModelPortal:P62871 SMR:P62871 DIP:DIP-29227N IntAct:P62871
MINT:MINT-1864875 STRING:P62871 PRIDE:P62871
Ensembl:ENSBTAT00000000259 Ensembl:ENSBTAT00000045065 GeneID:281201
KEGG:bta:281201 CTD:2782 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InParanoid:P62871 KO:K04536
OMA:CMLWDIE OrthoDB:EOG4HX51D EvolutionaryTrace:P62871
NextBio:20805257 ArrayExpress:P62871 InterPro:IPR016346
PIRSF:PIRSF002394 Uniprot:P62871
Length = 340
Score = 100 (40.3 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 29/95 (30%), Positives = 44/95 (46%)
Query: 50 TLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIA 109
TL+GH ++ + W +L S S DG++IIW N + H S V + A
Sbjct: 50 TLRGHLAKIYAMHWGTDS--RLLVSASQDGKLIIWDSYTTN---KVHAIPLRSSWVMTCA 104
Query: 110 WAPHELGLSLACGSSDGNISVFTA-TADGGWDTTR 143
+AP G +ACG D S++ T +G +R
Sbjct: 105 YAPS--GNYVACGGLDNICSIYNLKTREGNVRVSR 137
Score = 74 (31.1 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 29/122 (23%), Positives = 50/122 (40%)
Query: 164 GALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGL 223
G ++ L L + S CD + K+W + G+ C H + ++ + PN G
Sbjct: 185 GDVMSLSLAPDTRLFVSGACDASAKLWDVREGM----CRQTFTGHESDINAICFFPN-G- 238
Query: 224 PKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVA-DANNVT 282
+ A+ S D T ++ + E + + SVS+S +G LL D N
Sbjct: 239 --NAFATGSDDATCRLFDLRADQELMTYSH-DNIICGITSVSFSKSGRLLLAGYDDFNCN 295
Query: 283 LW 284
+W
Sbjct: 296 VW 297
>UNIPROTKB|P62872 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9615 "Canis lupus
familiaris" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:Z75134
RefSeq:NP_001003236.1 UniGene:Cfa.3773 ProteinModelPortal:P62872
SMR:P62872 STRING:P62872 PRIDE:P62872 Ensembl:ENSCAFT00000030502
Ensembl:ENSCAFT00000035727 GeneID:403912 KEGG:cfa:403912
InParanoid:P62872 NextBio:20817404 Uniprot:P62872
Length = 340
Score = 100 (40.3 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 29/95 (30%), Positives = 44/95 (46%)
Query: 50 TLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIA 109
TL+GH ++ + W +L S S DG++IIW N + H S V + A
Sbjct: 50 TLRGHLAKIYAMHWGTDS--RLLVSASQDGKLIIWDSYTTN---KVHAIPLRSSWVMTCA 104
Query: 110 WAPHELGLSLACGSSDGNISVFTA-TADGGWDTTR 143
+AP G +ACG D S++ T +G +R
Sbjct: 105 YAPS--GNYVACGGLDNICSIYNLKTREGNVRVSR 137
Score = 74 (31.1 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 29/122 (23%), Positives = 50/122 (40%)
Query: 164 GALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGL 223
G ++ L L + S CD + K+W + G+ C H + ++ + PN G
Sbjct: 185 GDVMSLSLAPDTRLFVSGACDASAKLWDVREGM----CRQTFTGHESDINAICFFPN-G- 238
Query: 224 PKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVA-DANNVT 282
+ A+ S D T ++ + E + + SVS+S +G LL D N
Sbjct: 239 --NAFATGSDDATCRLFDLRADQELMTYSH-DNIICGITSVSFSKSGRLLLAGYDDFNCN 295
Query: 283 LW 284
+W
Sbjct: 296 VW 297
>UNIPROTKB|P62873 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0001917
"photoreceptor inner segment" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IEA] [GO:0044297
"cell body" evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0007213
"G-protein coupled acetylcholine receptor signaling pathway"
evidence=TAS] [GO:0007265 "Ras protein signal transduction"
evidence=TAS] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0006112 "energy
reserve metabolic process" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0030168 "platelet activation" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=ISS] [GO:0071380 "cellular response to
prostaglandin E stimulus" evidence=ISS] [GO:0071870 "cellular
response to catecholamine stimulus" evidence=ISS] [GO:0005622
"intracellular" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007265 GO:GO:0030168 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006112 GO:GO:0004871 EMBL:CH471183 GO:GO:0060041
GO:GO:0007204 GO:GO:0007213 GO:GO:0007200
Pathway_Interaction_DB:lysophospholipid_pathway GO:GO:0071377
GO:GO:0007191 GO:GO:0071870 GO:GO:0071380
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:er_nongenomic_pathway
Pathway_Interaction_DB:txa2pathway GO:GO:0001750
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
EMBL:AL109917 EMBL:AL031282
Pathway_Interaction_DB:wnt_calcium_pathway GO:GO:0050909
GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X04526 EMBL:AF501882 EMBL:BT007305
EMBL:CR456784 EMBL:BC004186 EMBL:BC005888 EMBL:BC008991 EMBL:M36430
IPI:IPI00026268 PIR:A24853 RefSeq:NP_002065.1 UniGene:Hs.430425
ProteinModelPortal:P62873 SMR:P62873 DIP:DIP-599N IntAct:P62873
MINT:MINT-94562 STRING:P62873 PhosphoSite:P62873 DMDM:51317302
OGP:P62873 REPRODUCTION-2DPAGE:IPI00026268 PaxDb:P62873
PRIDE:P62873 DNASU:2782 Ensembl:ENST00000378606
Ensembl:ENST00000378609 GeneID:2782 KEGG:hsa:2782 UCSC:uc001aif.3
GeneCards:GC01M001748 HGNC:HGNC:4396 HPA:HPA040736 MIM:139380
neXtProt:NX_P62873 PharmGKB:PA28776 InParanoid:P62873
PhylomeDB:P62873 ChiTaRS:GNB1 EvolutionaryTrace:P62873
GenomeRNAi:2782 NextBio:10959 ArrayExpress:P62873 Bgee:P62873
CleanEx:HS_GNB1 Genevestigator:P62873 GermOnline:ENSG00000078369
Uniprot:P62873
Length = 340
Score = 100 (40.3 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 29/95 (30%), Positives = 44/95 (46%)
Query: 50 TLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIA 109
TL+GH ++ + W +L S S DG++IIW N + H S V + A
Sbjct: 50 TLRGHLAKIYAMHWGTDS--RLLVSASQDGKLIIWDSYTTN---KVHAIPLRSSWVMTCA 104
Query: 110 WAPHELGLSLACGSSDGNISVFTA-TADGGWDTTR 143
+AP G +ACG D S++ T +G +R
Sbjct: 105 YAPS--GNYVACGGLDNICSIYNLKTREGNVRVSR 137
Score = 74 (31.1 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 29/122 (23%), Positives = 50/122 (40%)
Query: 164 GALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGL 223
G ++ L L + S CD + K+W + G+ C H + ++ + PN G
Sbjct: 185 GDVMSLSLAPDTRLFVSGACDASAKLWDVREGM----CRQTFTGHESDINAICFFPN-G- 238
Query: 224 PKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVA-DANNVT 282
+ A+ S D T ++ + E + + SVS+S +G LL D N
Sbjct: 239 --NAFATGSDDATCRLFDLRADQELMTYSH-DNIICGITSVSFSKSGRLLLAGYDDFNCN 295
Query: 283 LW 284
+W
Sbjct: 296 VW 297
>MGI|MGI:95781 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein),
beta 1" species:10090 "Mus musculus" [GO:0001664 "G-protein coupled
receptor binding" evidence=ISO] [GO:0001750 "photoreceptor outer
segment" evidence=IDA] [GO:0001917 "photoreceptor inner segment"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=ISA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISO;ISA;IPI]
[GO:0006184 "GTP catabolic process" evidence=ISO;ISA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISO;IDA;TAS] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IDA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=ISO] [GO:0007603 "phototransduction,
visible light" evidence=ISA] [GO:0008283 "cell proliferation"
evidence=IDA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0031702
"type 1 angiotensin receptor binding" evidence=ISO] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISO] [GO:0044297
"cell body" evidence=ISO] [GO:0050909 "sensory perception of taste"
evidence=IDA] [GO:0051020 "GTPase binding" evidence=ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IMP]
[GO:0071456 "cellular response to hypoxia" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95781 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456
GO:GO:0007603 GO:GO:0004871 GO:GO:0060041 GO:GO:0007204
GO:GO:0007200 GO:GO:0010659 GO:GO:0001750 PRINTS:PR00319
GO:GO:0050909 GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 ChiTaRS:GNB1 EMBL:U29055
EMBL:AB042854 EMBL:BC013058 IPI:IPI00120716 PIR:JC5057
RefSeq:NP_001153488.1 RefSeq:NP_001153489.1 RefSeq:NP_032168.1
UniGene:Mm.2344 ProteinModelPortal:P62874 SMR:P62874 IntAct:P62874
STRING:P62874 PhosphoSite:P62874 PaxDb:P62874 PRIDE:P62874
Ensembl:ENSMUST00000030940 Ensembl:ENSMUST00000105616
Ensembl:ENSMUST00000165335 Ensembl:ENSMUST00000176637 GeneID:14688
KEGG:mmu:14688 InParanoid:P62874 NextBio:286631 Bgee:P62874
Genevestigator:P62874 Uniprot:P62874
Length = 340
Score = 100 (40.3 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 29/95 (30%), Positives = 44/95 (46%)
Query: 50 TLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIA 109
TL+GH ++ + W +L S S DG++IIW N + H S V + A
Sbjct: 50 TLRGHLAKIYAMHWGTDS--RLLVSASQDGKLIIWDSYTTN---KVHAIPLRSSWVMTCA 104
Query: 110 WAPHELGLSLACGSSDGNISVFTA-TADGGWDTTR 143
+AP G +ACG D S++ T +G +R
Sbjct: 105 YAPS--GNYVACGGLDNICSIYNLKTREGNVRVSR 137
Score = 74 (31.1 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 29/122 (23%), Positives = 50/122 (40%)
Query: 164 GALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGL 223
G ++ L L + S CD + K+W + G+ C H + ++ + PN G
Sbjct: 185 GDVMSLSLAPDTRLFVSGACDASAKLWDVREGM----CRQTFTGHESDINAICFFPN-G- 238
Query: 224 PKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVA-DANNVT 282
+ A+ S D T ++ + E + + SVS+S +G LL D N
Sbjct: 239 --NAFATGSDDATCRLFDLRADQELMTYSH-DNIICGITSVSFSKSGRLLLAGYDDFNCN 295
Query: 283 LW 284
+W
Sbjct: 296 VW 297
>RGD|2718 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein), beta
polypeptide 1" species:10116 "Rattus norvegicus" [GO:0001750
"photoreceptor outer segment" evidence=ISO] [GO:0001917
"photoreceptor inner segment" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISO;IDA;TAS] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISO;IMP;TAS] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA;ISO] [GO:0007204 "elevation of cytosolic calcium ion
concentration" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IDA] [GO:0044297
"cell body" evidence=IDA] [GO:0050909 "sensory perception of taste"
evidence=IEA;ISO] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IEA;ISO]
[GO:0071456 "cellular response to hypoxia" evidence=IDA] [GO:0001664
"G-protein coupled receptor binding" evidence=IMP] [GO:0031702 "type
1 angiotensin receptor binding" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:2718
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GO:GO:0008283 GO:GO:0030425 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456 GO:GO:0007186
GO:GO:0004871 GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 PDB:3SN6
PDBsum:3SN6 GO:GO:0001917 GO:GO:0010659 GO:GO:0044297 PRINTS:PR00319
GO:GO:0042622 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U34958 EMBL:U88324 EMBL:AY552805 EMBL:BC078809
IPI:IPI00212655 RefSeq:NP_112249.2 UniGene:Rn.126047
ProteinModelPortal:P54311 SMR:P54311 DIP:DIP-37029N IntAct:P54311
MINT:MINT-1795773 STRING:P54311 PhosphoSite:P54311 PRIDE:P54311
Ensembl:ENSRNOT00000041789 GeneID:24400 KEGG:rno:24400
InParanoid:P54311 EvolutionaryTrace:P54311 NextBio:603199
ArrayExpress:P54311 Genevestigator:P54311
GermOnline:ENSRNOG00000016638 Uniprot:P54311
Length = 340
Score = 100 (40.3 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 29/95 (30%), Positives = 44/95 (46%)
Query: 50 TLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIA 109
TL+GH ++ + W +L S S DG++IIW N + H S V + A
Sbjct: 50 TLRGHLAKIYAMHWGTDS--RLLVSASQDGKLIIWDSYTTN---KVHAIPLRSSWVMTCA 104
Query: 110 WAPHELGLSLACGSSDGNISVFTA-TADGGWDTTR 143
+AP G +ACG D S++ T +G +R
Sbjct: 105 YAPS--GNYVACGGLDNICSIYNLKTREGNVRVSR 137
Score = 74 (31.1 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 29/122 (23%), Positives = 50/122 (40%)
Query: 164 GALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGL 223
G ++ L L + S CD + K+W + G+ C H + ++ + PN G
Sbjct: 185 GDVMSLSLAPDTRLFVSGACDASAKLWDVREGM----CRQTFTGHESDINAICFFPN-G- 238
Query: 224 PKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVA-DANNVT 282
+ A+ S D T ++ + E + + SVS+S +G LL D N
Sbjct: 239 --NAFATGSDDATCRLFDLRADQELMTYSH-DNIICGITSVSFSKSGRLLLAGYDDFNCN 295
Query: 283 LW 284
+W
Sbjct: 296 VW 297
>MGI|MGI:1913972 [details] [associations]
symbol:Spag16 "sperm associated antigen 16" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0005929 "cilium" evidence=IEA]
[GO:0005930 "axoneme" evidence=IDA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0035085 "cilium axoneme" evidence=IDA] [GO:0042384 "cilium
assembly" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1913972 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086
GeneTree:ENSGT00700000104486 CTD:79582 HOVERGEN:HBG086482
OMA:EGHNHAV OrthoDB:EOG41ZF9F EMBL:AF490391 EMBL:AK014865
EMBL:AK015884 EMBL:AK016618 EMBL:AK083083 EMBL:BC120668
IPI:IPI00177216 IPI:IPI00473221 IPI:IPI00556714 IPI:IPI00556881
RefSeq:NP_001258462.1 RefSeq:NP_080004.1 RefSeq:NP_083436.2
UniGene:Mm.440554 ProteinModelPortal:Q8K450 SMR:Q8K450
DIP:DIP-59752N STRING:Q8K450 PhosphoSite:Q8K450 PaxDb:Q8K450
PRIDE:Q8K450 Ensembl:ENSMUST00000065425 Ensembl:ENSMUST00000113940
GeneID:66722 KEGG:mmu:66722 UCSC:uc007bjg.1 UCSC:uc007bjh.1
UCSC:uc007bji.1 HOGENOM:HOG000256703 InParanoid:Q0VBE7
NextBio:322475 Bgee:Q8K450 CleanEx:MM_SPAG16 Genevestigator:Q8K450
GermOnline:ENSMUSG00000053153 Uniprot:Q8K450
Length = 639
Score = 139 (54.0 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 44/126 (34%), Positives = 60/126 (47%)
Query: 8 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPK 67
+GH D + G +LAT+S DS+IK+ L+ + TL+GH VW W H
Sbjct: 399 SGHTDWLSGCCFHPSGSKLATSSGDSTIKLWDLNKG--ECTLTLEGHNHAVWSCTW-H-S 454
Query: 68 FGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGN 127
G +AS S D IW + N +T H SVNSI + P L A S+D
Sbjct: 455 CGDFVASASLDMTSKIW---DVNSERCRYTLYGHTDSVNSIEFFPFSNILLTA--SADKT 509
Query: 128 ISVFTA 133
+SV+ A
Sbjct: 510 LSVWDA 515
Score = 38 (18.4 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 176 QKLASCGCDNTVKVW 190
+ L S G D T+++W
Sbjct: 624 ENLYSGGSDGTIRLW 638
>SGD|S000001885 [details] [associations]
symbol:CDC4 "F-box protein required for G1/S and G2/M
transition" species:4932 "Saccharomyces cerevisiae" [GO:0000086
"G2/M transition of mitotic cell cycle" evidence=IGI;IMP]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043224 "nuclear SCF
ubiquitin ligase complex" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA;IPI]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IDA] [GO:0007126 "meiosis" evidence=IMP] [GO:0051301 "cell
division" evidence=IEA] [GO:0030435 "sporulation resulting in
formation of a cellular spore" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 SGD:S000001885 GO:GO:0007126 GO:GO:0000086
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0000082 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:D50617 EMBL:BK006940
SUPFAM:SSF81383 GO:GO:0030435 GO:GO:0016363 GO:GO:0042787
GO:GO:0043130 EMBL:Z46255 GeneTree:ENSGT00550000075528
GO:GO:0031146 EMBL:X05625 PIR:S56245 RefSeq:NP_116585.1 PDB:1NEX
PDB:2P63 PDB:3MKS PDB:3V7D PDBsum:1NEX PDBsum:2P63 PDBsum:3MKS
PDBsum:3V7D ProteinModelPortal:P07834 SMR:P07834 DIP:DIP-1625N
IntAct:P07834 MINT:MINT-389524 STRING:P07834 PaxDb:P07834
PRIDE:P07834 EnsemblFungi:YFL009W GeneID:850539 KEGG:sce:YFL009W
CYGD:YFL009w HOGENOM:HOG000111495 KO:K03361 OMA:VVTCLQH
OrthoDB:EOG4B2X5M EvolutionaryTrace:P07834 NextBio:966298
Genevestigator:P07834 GermOnline:YFL009W GO:GO:0043224
Uniprot:P07834
Length = 779
Score = 137 (53.3 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 62/247 (25%), Positives = 98/247 (39%)
Query: 1 MPAQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQ 60
+P + GH +V + F + T + D I++ N + L L GH G VW
Sbjct: 371 VPQRTTLRGHMTSVI-TCLQFEDNYVITGADDKMIRVYDSINK--KFLLQLSGHDGGVWA 427
Query: 61 VAWAHPKFGSILASCSYDGQVIIW--KEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLS 118
+ +AH G IL S S D V +W K+G H F H S+V + ++
Sbjct: 428 LKYAH---GGILVSGSTDRTVRVWDIKKG-----CCTHVFKGHNSTVRCLDIVEYKNIKY 479
Query: 119 LACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVG-LGLLDPVQK 177
+ GS D + V+ + + +P+ + P G L G + + V
Sbjct: 480 IVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFV-GVLRGHMASVRTVSG 538
Query: 178 ----LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQ 233
+ S DNT+ VW + +M C L H+D + S + + SAS
Sbjct: 539 HGNIVVSGSYDNTLIVWD----VAQMKCLYILSGHTDRIYSTIYDHE----RKRCISASM 590
Query: 234 DGTVVIW 240
D T+ IW
Sbjct: 591 DTTIRIW 597
>UNIPROTKB|Q40687 [details] [associations]
symbol:LOC_Os03g46650 "Guanine nucleotide-binding protein
subunit beta" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=IEP;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005783 GO:GO:0005886 GO:GO:0009723
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0048527 GO:GO:0009817 GO:GO:0009845
GO:GO:0009887 GO:GO:0004871 GO:GO:0010154 GO:GO:0030968
GO:GO:0009867 PRINTS:PR00319 GO:GO:0080008 HOGENOM:HOG000176356
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X89737
EMBL:AC133930 PIR:T03765 ProteinModelPortal:Q40687 IntAct:Q40687
STRING:Q40687 EnsemblPlants:LOC_Os03g46650.1 Gramene:Q40687
Uniprot:Q40687
Length = 380
Score = 132 (51.5 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 38/114 (33%), Positives = 55/114 (48%)
Query: 50 TLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIA 109
TL+GH G V+ + W K + + S S DG++I+W N + H H V + A
Sbjct: 61 TLQGHSGKVYSLDWTPEK--NWIVSASQDGRLIVW---NALTSQKTHAIKLHCPWVMTCA 115
Query: 110 WAPHELGLSLACGSSDGNISVFT----ATADGGWDTTRIDQAHPVGVTSVSWAP 159
+AP+ G S+ACG D S+F A DG +RI H V+S + P
Sbjct: 116 FAPN--GQSVACGGLDSACSIFNLNSQADRDGNIPVSRILTGHKGYVSSCQYVP 167
WARNING: HSPs involving 331 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.129 0.424 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 302 302 0.00097 115 3 11 22 0.42 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 581
No. of states in DFA: 625 (66 KB)
Total size of DFA: 277 KB (2140 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.39u 0.14s 24.53t Elapsed: 00:00:01
Total cpu time: 24.48u 0.14s 24.62t Elapsed: 00:00:01
Start: Sat May 11 06:03:40 2013 End: Sat May 11 06:03:41 2013
WARNINGS ISSUED: 2